Query 011722
Match_columns 479
No_of_seqs 252 out of 1654
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 04:31:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011722.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011722hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1169 Diacylglycerol kinase 100.0 1.1E-74 2.4E-79 609.5 25.0 415 10-479 192-621 (634)
2 KOG0782 Predicted diacylglycer 100.0 1.8E-63 3.9E-68 507.4 15.9 394 10-469 274-688 (1004)
3 PRK12361 hypothetical protein; 100.0 2.3E-44 4.9E-49 390.5 24.1 349 16-477 167-540 (547)
4 PRK11914 diacylglycerol kinase 100.0 7.8E-43 1.7E-47 352.7 27.2 286 79-477 7-302 (306)
5 PRK13057 putative lipid kinase 100.0 9.8E-43 2.1E-47 348.9 25.4 274 84-477 1-283 (287)
6 TIGR03702 lip_kinase_YegS lipi 100.0 3.3E-42 7.2E-47 346.1 24.7 281 82-477 1-286 (293)
7 PRK13059 putative lipid kinase 100.0 6.4E-42 1.4E-46 344.3 26.1 281 80-477 1-291 (295)
8 PRK13337 putative lipid kinase 100.0 4.2E-42 9.2E-47 347.0 24.4 283 80-477 1-292 (304)
9 PRK00861 putative lipid kinase 100.0 1E-41 2.2E-46 343.5 25.4 281 80-477 2-295 (300)
10 PRK13055 putative lipid kinase 100.0 1.1E-41 2.4E-46 348.2 24.2 287 80-477 2-299 (334)
11 PRK13054 lipid kinase; Reviewe 100.0 9.1E-41 2E-45 336.7 26.1 283 79-477 2-292 (300)
12 KOG1170 Diacylglycerol kinase 100.0 2.4E-43 5.1E-48 371.8 6.3 398 9-470 133-785 (1099)
13 COG1597 LCB5 Sphingosine kinas 100.0 2.6E-40 5.7E-45 332.8 24.0 284 80-478 2-295 (301)
14 TIGR00147 lipid kinase, YegS/R 100.0 4.7E-40 1E-44 330.2 24.9 282 80-476 1-292 (293)
15 PLN02958 diacylglycerol kinase 100.0 7.9E-39 1.7E-43 340.5 25.8 301 78-476 109-463 (481)
16 PLN02204 diacylglycerol kinase 100.0 3.6E-33 7.7E-38 297.0 24.7 319 76-477 155-596 (601)
17 PF00609 DAGK_acc: Diacylglyce 100.0 1.7E-33 3.6E-38 259.0 8.5 160 274-451 1-161 (161)
18 KOG1116 Sphingosine kinase, in 99.9 2.4E-26 5.3E-31 240.6 19.3 327 75-478 174-566 (579)
19 PF00781 DAGK_cat: Diacylglyce 99.9 6E-22 1.3E-26 175.6 11.2 125 82-230 1-127 (130)
20 smart00045 DAGKa Diacylglycero 99.9 7.6E-22 1.7E-26 181.4 11.5 160 274-451 1-160 (160)
21 smart00046 DAGKc Diacylglycero 99.8 9.9E-21 2.1E-25 166.7 11.4 101 84-201 1-101 (124)
22 KOG1115 Ceramide kinase [Lipid 99.7 4.2E-17 9E-22 163.5 16.1 309 77-471 155-501 (516)
23 KOG4435 Predicted lipid kinase 99.2 8.5E-11 1.9E-15 118.4 10.7 136 75-227 55-195 (535)
24 PRK03708 ppnK inorganic polyph 98.3 3.9E-06 8.5E-11 84.0 11.6 120 82-230 2-122 (277)
25 PRK02645 ppnK inorganic polyph 98.3 5.7E-06 1.2E-10 83.9 11.4 125 79-232 2-127 (305)
26 COG3199 Predicted inorganic po 97.8 0.00014 3E-09 73.5 10.9 58 146-220 99-157 (355)
27 PRK03378 ppnK inorganic polyph 97.7 0.00053 1.1E-08 69.2 12.6 126 79-231 4-130 (292)
28 PRK01231 ppnK inorganic polyph 97.6 0.0012 2.6E-08 66.8 13.3 127 80-232 4-130 (295)
29 PRK14075 pnk inorganic polypho 97.4 0.068 1.5E-06 53.0 23.6 41 426-476 194-234 (256)
30 PF01513 NAD_kinase: ATP-NAD k 97.3 0.0011 2.3E-08 66.7 9.7 121 82-231 1-143 (285)
31 PRK14077 pnk inorganic polypho 96.9 0.015 3.2E-07 58.7 13.4 125 78-232 8-132 (287)
32 PRK02155 ppnK NAD(+)/NADH kina 96.7 0.027 5.8E-07 56.9 13.5 127 80-232 5-131 (291)
33 PRK03372 ppnK inorganic polyph 96.7 0.024 5.2E-07 57.6 12.9 128 77-230 2-138 (306)
34 PRK04539 ppnK inorganic polyph 96.6 0.032 6.9E-07 56.5 13.0 128 78-231 3-135 (296)
35 PRK02649 ppnK inorganic polyph 96.6 0.036 7.8E-07 56.4 13.2 127 80-231 1-135 (305)
36 PRK01911 ppnK inorganic polyph 96.4 0.056 1.2E-06 54.6 13.0 122 82-232 2-132 (292)
37 PRK03501 ppnK inorganic polyph 96.3 0.058 1.3E-06 53.7 12.4 104 81-230 3-107 (264)
38 PLN02935 Bifunctional NADH kin 95.9 0.14 3E-06 55.0 13.7 132 79-230 193-328 (508)
39 PRK14076 pnk inorganic polypho 95.4 0.2 4.3E-06 55.4 13.2 123 79-230 289-414 (569)
40 PRK04885 ppnK inorganic polyph 94.6 0.43 9.3E-06 47.6 11.8 100 82-228 2-101 (265)
41 PLN02727 NAD kinase 94.4 0.34 7.3E-06 55.5 11.5 116 78-222 676-801 (986)
42 PRK01185 ppnK inorganic polyph 94.3 0.61 1.3E-05 46.6 12.2 116 82-232 2-117 (271)
43 PRK00561 ppnK inorganic polyph 94.3 0.67 1.5E-05 46.0 12.2 35 147-188 33-67 (259)
44 PLN02929 NADH kinase 92.5 0.7 1.5E-05 46.9 9.2 75 146-231 63-148 (301)
45 PRK02231 ppnK inorganic polyph 91.7 0.92 2E-05 45.4 8.9 35 147-188 42-76 (272)
46 PRK04761 ppnK inorganic polyph 89.7 0.47 1E-05 46.7 4.8 36 146-188 24-59 (246)
47 COG0061 nadF NAD kinase [Coenz 88.5 5.8 0.00013 39.8 11.7 70 146-232 54-123 (281)
48 KOG4180 Predicted kinase [Gene 87.1 0.83 1.8E-05 46.2 4.5 76 145-234 103-180 (395)
49 PF10254 Pacs-1: PACS-1 cytoso 81.2 4.1 8.9E-05 43.0 6.8 50 148-198 76-128 (414)
50 cd08197 DOIS 2-deoxy-scyllo-in 81.0 5.2 0.00011 41.6 7.6 96 81-191 24-125 (355)
51 cd08172 GlyDH-like1 Glycerol d 80.2 9.1 0.0002 39.5 9.1 91 81-194 24-118 (347)
52 cd08186 Fe-ADH8 Iron-containin 78.9 8.8 0.00019 40.2 8.6 106 80-197 26-148 (383)
53 cd08180 PDD 1,3-propanediol de 78.6 8.7 0.00019 39.3 8.3 101 81-194 23-127 (332)
54 cd07766 DHQ_Fe-ADH Dehydroquin 77.6 7.7 0.00017 39.6 7.5 92 80-189 23-117 (332)
55 cd08170 GlyDH Glycerol dehydro 77.3 10 0.00023 39.1 8.5 94 81-194 23-119 (351)
56 PRK09423 gldA glycerol dehydro 76.6 17 0.00037 37.8 9.9 94 81-194 30-126 (366)
57 cd08194 Fe-ADH6 Iron-containin 76.5 9.4 0.0002 39.8 7.9 101 81-194 24-140 (375)
58 cd08171 GlyDH-like2 Glycerol d 76.2 6.2 0.00014 40.7 6.5 93 81-193 23-119 (345)
59 cd08181 PPD-like 1,3-propanedi 76.1 11 0.00023 39.1 8.2 104 81-196 26-144 (357)
60 cd08550 GlyDH-like Glycerol_de 75.8 13 0.00029 38.2 8.8 94 81-194 23-119 (349)
61 TIGR03405 Phn_Fe-ADH phosphona 75.3 19 0.0004 37.4 9.7 105 81-196 24-146 (355)
62 cd08169 DHQ-like Dehydroquinat 75.1 11 0.00024 38.9 7.9 99 80-193 23-126 (344)
63 cd08551 Fe-ADH iron-containing 75.0 9.7 0.00021 39.5 7.6 104 80-196 23-142 (370)
64 cd08187 BDH Butanol dehydrogen 74.5 13 0.00028 38.9 8.3 105 81-197 29-149 (382)
65 cd08173 Gro1PDH Sn-glycerol-1- 73.2 22 0.00048 36.5 9.6 88 81-189 26-113 (339)
66 cd08176 LPO Lactadehyde:propan 71.5 12 0.00027 39.0 7.4 105 81-198 29-149 (377)
67 KOG2178 Predicted sugar kinase 69.5 8.2 0.00018 40.3 5.2 60 147-223 168-227 (409)
68 cd08195 DHQS Dehydroquinate sy 68.7 16 0.00035 37.6 7.4 95 80-186 24-119 (345)
69 cd08183 Fe-ADH2 Iron-containin 68.6 31 0.00068 35.9 9.6 99 81-195 23-140 (374)
70 COG1454 EutG Alcohol dehydroge 68.4 28 0.0006 36.6 9.0 107 79-198 28-150 (377)
71 cd08185 Fe-ADH1 Iron-containin 67.7 21 0.00045 37.3 8.1 106 81-198 26-152 (380)
72 PRK15138 aldehyde reductase; P 67.6 25 0.00054 37.0 8.6 105 81-197 30-151 (387)
73 cd08177 MAR Maleylacetate redu 67.3 15 0.00032 37.8 6.8 91 81-191 24-115 (337)
74 PRK00002 aroB 3-dehydroquinate 66.6 19 0.00042 37.2 7.6 98 80-192 31-134 (358)
75 PF00731 AIRC: AIR carboxylase 65.7 30 0.00065 31.5 7.6 80 92-189 8-89 (150)
76 cd08549 G1PDH_related Glycerol 63.3 26 0.00056 36.0 7.6 86 81-187 25-113 (332)
77 cd08179 NADPH_BDH NADPH-depend 63.0 21 0.00046 37.2 7.0 103 81-196 24-146 (375)
78 TIGR01357 aroB 3-dehydroquinat 62.6 26 0.00056 36.0 7.5 91 81-186 21-115 (344)
79 PF13685 Fe-ADH_2: Iron-contai 62.1 13 0.00029 36.7 5.1 93 81-191 20-112 (250)
80 cd08192 Fe-ADH7 Iron-containin 61.4 34 0.00073 35.6 8.2 101 81-194 25-145 (370)
81 cd08182 HEPD Hydroxyethylphosp 61.3 34 0.00074 35.5 8.2 48 146-194 76-141 (367)
82 cd08189 Fe-ADH5 Iron-containin 61.2 40 0.00088 35.1 8.8 104 80-196 26-146 (374)
83 cd08184 Fe-ADH3 Iron-containin 60.2 42 0.00091 34.8 8.6 50 147-197 81-144 (347)
84 PRK09860 putative alcohol dehy 59.9 44 0.00095 35.1 8.8 106 80-198 31-152 (383)
85 cd08174 G1PDH-like Glycerol-1- 59.4 70 0.0015 32.6 10.0 37 147-190 75-111 (331)
86 PRK06203 aroB 3-dehydroquinate 57.9 64 0.0014 34.0 9.6 99 80-186 42-145 (389)
87 PRK00843 egsA NAD(P)-dependent 56.9 49 0.0011 34.2 8.5 90 81-191 35-124 (350)
88 cd08198 DHQS-like2 Dehydroquin 56.8 87 0.0019 32.8 10.3 100 80-187 30-134 (369)
89 TIGR02638 lactal_redase lactal 56.2 44 0.00094 34.9 8.0 104 80-196 29-150 (379)
90 PRK10624 L-1,2-propanediol oxi 56.2 42 0.00092 35.1 7.9 106 80-198 30-153 (382)
91 cd08175 G1PDH Glycerol-1-phosp 55.7 31 0.00068 35.5 6.8 88 81-187 24-113 (348)
92 PF00782 DSPc: Dual specificit 54.5 3.5 7.6E-05 35.8 -0.5 34 16-49 65-99 (133)
93 PLN02834 3-dehydroquinate synt 54.4 51 0.0011 35.3 8.2 95 80-187 100-198 (433)
94 TIGR02482 PFKA_ATP 6-phosphofr 53.7 59 0.0013 33.1 8.2 41 146-193 90-130 (301)
95 cd08199 EEVS 2-epi-5-epi-valio 53.2 49 0.0011 34.4 7.7 95 80-186 26-122 (354)
96 PLN00180 NDF6 (NDH-dependent f 52.7 3 6.6E-05 37.7 -1.1 16 151-166 128-143 (180)
97 PTZ00286 6-phospho-1-fructokin 49.9 47 0.001 35.8 7.1 51 146-198 175-228 (459)
98 COG2453 CDC14 Predicted protei 49.6 4.4 9.6E-05 37.8 -0.6 34 15-48 96-130 (180)
99 smart00195 DSPc Dual specifici 49.4 4.6 0.0001 35.3 -0.5 33 16-48 70-103 (138)
100 PRK15454 ethanol dehydrogenase 48.7 1.1E+02 0.0024 32.2 9.6 90 99-198 65-170 (395)
101 PF00465 Fe-ADH: Iron-containi 48.7 49 0.0011 34.2 6.9 104 82-198 23-143 (366)
102 cd08178 AAD_C C-terminal alcoh 47.7 63 0.0014 34.0 7.6 103 81-197 22-152 (398)
103 cd08191 HHD 6-hydroxyhexanoate 46.9 68 0.0015 33.6 7.7 102 81-196 23-141 (386)
104 cd00763 Bacterial_PFK Phosphof 45.2 1E+02 0.0022 31.7 8.3 40 146-193 91-130 (317)
105 PF12219 End_tail_spike: Catal 44.4 12 0.00026 33.3 1.3 14 148-161 85-98 (160)
106 cd08190 HOT Hydroxyacid-oxoaci 44.1 99 0.0022 32.8 8.5 74 81-167 24-99 (414)
107 PRK10586 putative oxidoreducta 43.1 1.5E+02 0.0032 30.9 9.4 89 81-191 35-123 (362)
108 PRK06830 diphosphate--fructose 42.5 62 0.0014 34.8 6.6 51 146-198 171-224 (443)
109 cd00363 PFK Phosphofructokinas 41.4 1.1E+02 0.0025 31.5 8.1 46 146-193 91-136 (338)
110 TIGR02483 PFK_mixed phosphofru 41.4 1.2E+02 0.0027 31.1 8.4 45 146-198 93-140 (324)
111 PRK03202 6-phosphofructokinase 40.3 1.2E+02 0.0026 31.1 8.1 40 146-193 92-131 (320)
112 COG1979 Uncharacterized oxidor 38.9 85 0.0018 32.4 6.5 79 78-167 27-109 (384)
113 cd00127 DSPc Dual specificity 38.7 9 0.0002 33.3 -0.4 32 17-48 74-106 (139)
114 cd08188 Fe-ADH4 Iron-containin 37.9 1.5E+02 0.0033 30.8 8.7 102 80-194 28-145 (377)
115 cd00764 Eukaryotic_PFK Phospho 37.7 1.2E+02 0.0027 34.8 8.3 47 146-193 477-523 (762)
116 PRK14021 bifunctional shikimat 37.7 2E+02 0.0043 31.7 9.8 43 147-194 269-313 (542)
117 PLN02564 6-phosphofructokinase 37.2 1.3E+02 0.0029 32.7 8.1 51 146-198 175-228 (484)
118 PRK13805 bifunctional acetalde 35.7 1.5E+02 0.0033 34.6 9.0 74 80-167 480-558 (862)
119 PRK06756 flavodoxin; Provision 35.3 2.5E+02 0.0053 24.7 8.5 28 81-110 2-29 (148)
120 cd08196 DHQS-like1 Dehydroquin 35.2 2.2E+02 0.0047 29.5 9.1 91 81-186 20-110 (346)
121 PRK06555 pyrophosphate--fructo 34.9 1.7E+02 0.0036 31.2 8.2 46 146-193 111-156 (403)
122 TIGR01162 purE phosphoribosyla 34.7 2E+02 0.0043 26.5 7.6 76 97-189 11-87 (156)
123 KOG1719 Dual specificity phosp 34.2 16 0.00034 33.6 0.4 33 16-48 101-134 (183)
124 cd08193 HVD 5-hydroxyvalerate 33.5 1.6E+02 0.0035 30.6 8.0 102 80-194 26-143 (376)
125 PRK12613 galactose-6-phosphate 32.6 1E+02 0.0022 27.8 5.4 38 97-137 12-49 (141)
126 PRK14072 6-phosphofructokinase 32.4 1.9E+02 0.0041 30.9 8.2 51 146-198 102-155 (416)
127 cd00764 Eukaryotic_PFK Phospho 31.4 1.4E+02 0.003 34.4 7.4 48 146-193 96-158 (762)
128 PRK14071 6-phosphofructokinase 31.3 2E+02 0.0043 30.0 8.1 46 146-198 106-154 (360)
129 TIGR01118 lacA galactose-6-pho 30.8 1.1E+02 0.0024 27.6 5.3 39 97-137 12-50 (141)
130 PRK08621 galactose-6-phosphate 30.3 1.2E+02 0.0025 27.5 5.4 38 97-136 12-49 (142)
131 COG0337 AroB 3-dehydroquinate 30.0 3.5E+02 0.0076 28.3 9.4 97 78-186 31-128 (360)
132 PRK05948 precorrin-2 methyltra 30.0 4.2E+02 0.0091 25.9 9.7 36 146-186 91-130 (238)
133 TIGR02478 6PF1K_euk 6-phosphof 29.0 1.5E+02 0.0033 34.1 7.3 48 146-193 93-155 (745)
134 COG0205 PfkA 6-phosphofructoki 28.0 1.8E+02 0.0038 30.3 6.9 41 146-193 93-133 (347)
135 PRK00536 speE spermidine synth 26.8 46 0.001 33.1 2.4 19 147-165 73-92 (262)
136 PTZ00393 protein tyrosine phos 26.4 18 0.0004 35.5 -0.5 30 18-47 164-194 (241)
137 PLN02884 6-phosphofructokinase 25.3 2.9E+02 0.0062 29.5 8.1 51 146-198 142-195 (411)
138 PF00365 PFK: Phosphofructokin 24.4 1.3E+02 0.0028 30.3 5.0 42 146-194 91-132 (282)
139 COG0371 GldA Glycerol dehydrog 23.7 3.4E+02 0.0074 28.4 8.1 95 81-196 31-126 (360)
140 TIGR03590 PseG pseudaminic aci 23.1 2.3E+02 0.0049 28.1 6.6 29 146-186 240-268 (279)
141 cd01836 FeeA_FeeB_like SGNH_hy 22.7 2.1E+02 0.0045 26.0 5.9 59 150-219 44-102 (191)
142 PF07015 VirC1: VirC1 protein; 22.4 6.7E+02 0.015 24.5 9.4 98 81-194 1-100 (231)
143 TIGR00730 conserved hypothetic 22.0 1.2E+02 0.0027 28.2 4.1 48 127-187 17-66 (178)
144 PF13528 Glyco_trans_1_3: Glyc 21.9 4.4E+02 0.0094 26.0 8.5 30 147-187 250-279 (318)
145 PLN02948 phosphoribosylaminoim 21.8 5.3E+02 0.012 28.7 9.7 90 79-189 409-499 (577)
146 PRK07085 diphosphate--fructose 21.7 1.5E+02 0.0032 32.9 5.2 50 147-198 164-218 (555)
147 PLN03028 pyrophosphate--fructo 21.0 1.6E+02 0.0034 33.1 5.3 50 147-198 173-227 (610)
148 TIGR02478 6PF1K_euk 6-phosphof 20.4 3.7E+02 0.0081 31.0 8.3 47 146-193 477-523 (745)
No 1
>KOG1169 consensus Diacylglycerol kinase [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-74 Score=609.54 Aligned_cols=415 Identities=36% Similarity=0.610 Sum_probs=333.5
Q ss_pred ccccchhee---hhhhcCCcc-eeecccccccccccccchhhhhhhhhhhcCCCCCCCCCCCC---c--c-ccCCCCCCC
Q 011722 10 IAARSSMID---SIRGCGLSG-MRIDKEDLRRKLSIPEYLRVAMSNAIRRKEGEPPADTCQSD---V--I-VDGNGVQPP 79 (479)
Q Consensus 10 ~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~---~--~-~~~~~~~~~ 79 (479)
++.++|.|+ -|.+|-... -+|+++.+++++.+|.+++++....+ .++.........++ + . .......++
T Consensus 192 ~~~~~c~~~~~~~h~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (634)
T KOG1169|consen 192 LTGPRCGWCQIRVHDKCKSELSQECDLGELKDHILPPSTLRPARTARV-ASDHSGLPGEKSEEVTDAKKMQQLLVTDPPD 270 (634)
T ss_pred ccccccceeeeeeecchHHHHhhhccChhhhhccCCceeeeccccccc-ccccccccccccccccccccccccccCCCCC
Confidence 457788886 344554444 69999999999999999999876521 00111110000000 0 0 011456678
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeec-CccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVK-PHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~-p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
.+|++||+||||||++|+.++++|+.+|++.|||||.... |.. ++. +.++ .+..||+||||||
T Consensus 271 ~~PLlVfvNpKSGg~~G~~ll~~f~~lLnp~QVfdl~~~~~p~~----gL~----l~~~--------~~~~riLVcGGDG 334 (634)
T KOG1169|consen 271 WRPLLVFVNPKSGGQQGERLLRRFRYLLNPVQVFDLLKRGGPRP----GLT----LFRD--------VPDFRILVCGGDG 334 (634)
T ss_pred CcceEEEEecCCcccccHHHHHHHHHhcChhhEEecccCCCCch----hHH----HHHh--------CCcceEEEecCCC
Confidence 9999999999999999999999999999999999998764 543 332 3222 2455999999999
Q ss_pred hHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEEecCCCC
Q 011722 159 TVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGE 238 (479)
Q Consensus 159 Tv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~~~~~~~~ 238 (479)
||+|||+++.+++..+..+.||+||+|+||||||+|+|+||++||+++.. +.++|+.+..+.++++|+|+|.+.++++.
T Consensus 335 TvGWVL~~i~~~n~~~~~~~PpVAilPLGTGNDLsR~l~WGgg~~g~~~~-~~~iL~~i~~a~v~~lDrW~v~v~~~~~~ 413 (634)
T KOG1169|consen 335 TVGWVLGCIDKLNKQNAIPPPPVAILPLGTGNDLSRVLRWGGGYPGEDRN-LIKILKDIEEAPVTKLDRWKVLVEPQSGE 413 (634)
T ss_pred cchhhhhhHHHhhccccCCCCCeEEEecCCCCchHhhcCCCCCCCcchhh-HHHHHHhhhhccceecceeeEEeeccccc
Confidence 99999999999876665678999999999999999999999999999877 88999999999999999999999887775
Q ss_pred cCCCCCCCCCCccccccccccccCCCCCcccceeceEeeEEeeehhHHHhhHhhhhcccCCCccccCCCcceeeeccccc
Q 011722 239 VVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCT 318 (479)
Q Consensus 239 ~~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~rl~nkl~Y~~~~~~ 318 (479)
.. +++++..+. + .. ....+|+||||||+||+|+++||.+|+++|++|+||+.||++|+.+|++
T Consensus 414 ~~--~~~~~~~~~-----~----~~------~~~~imnNYFSIGvDA~Ia~~FH~~Re~~PekF~Sr~~NKl~Yf~~G~q 476 (634)
T KOG1169|consen 414 LV--QYSLKPPEK-----G----DP------VPYGIMNNYFSIGVDAQIAYGFHNMREKNPEKFNSRMKNKLWYFEFGTQ 476 (634)
T ss_pred cc--cccccCCCc-----C----CC------CCeeeEeeeeeecccHHHHHHHHHHhhhChHhhcchhhceeeeeeecch
Confidence 44 555554311 1 11 2358999999999999999999999999999999999999999999985
Q ss_pred ccccccccCCCCcccccccceeeeEeeeecCCceEEeeCCcceEEEEeccCCCCcCCCCCCCCCchhhhccCCccccCCC
Q 011722 319 QGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADD 398 (479)
Q Consensus 319 ~~~f~~~~~~~~~~~~l~~~~~~~i~~v~~~~~e~~~~~~~~~~ivv~N~~~~ggG~~~wg~~~p~~~~~~~~~~a~~dD 398 (479)
+ +|++.|++ ++ +.+++. .+.+|+.++++.++.+|+++|++|||||.+|||+.++++.+.+++.+++.||
T Consensus 477 ~-~f~~~ck~------~~--~~i~i~--~~~d~~dl~~p~sleGIv~LNIpS~ggG~nlWg~~~~~~~~~~~~~~~d~~d 545 (634)
T KOG1169|consen 477 E-TFAARCKN------LH--LHIKIE--LDGDGEDLELPKSLEGIVVLNIPSWGGGSNLWGNSNKSKGNFRGFSEADDDD 545 (634)
T ss_pred h-hHHHhhcC------Cc--cceEEE--EcccceEccCCCCceeEEEEcccccccCcccccccCccccccccccccCCCc
Confidence 4 58888863 21 223332 2346888888889999999999999999999999999999999999999999
Q ss_pred CeeEEEEEccchhHHHHHHhhccceEEee----eeEEEEEecCCccccceEEecCCccCCCCCCCCceEEEEEeeccccc
Q 011722 399 GLLEIFGLKQGWHASFVMVELISAKHIAQ----AAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSL 474 (479)
Q Consensus 399 GlLeVv~~~~~~~~~~l~~~l~~g~~l~q----~~~i~I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~v~i~~~p~~~~ 474 (479)
|++||+++++.||+.+++.+|.+++|++| +.++.|.. ++.+|||||||||+|||+. |+|++.+.+.+
T Consensus 546 gliEvvgv~~~~h~~~~qvgL~~a~rigQ~~a~~~~~~i~~----~k~~PMQiDGEPW~Q~p~t-----I~Ithk~q~~m 616 (634)
T KOG1169|consen 546 GLIEVVGVQDSWHLLQEQVGLESALRIGQRLAQCSERVIGT----KKTFPMQIDGEPWMQPPCT-----IEITHKNQAPM 616 (634)
T ss_pred CeEEEEEeccchhhhhhhhccchhhHHHHHhhccEEEEecc----ccCcceecCCccccCCCce-----EEEEecchHhh
Confidence 99999999999999999999999999986 23344554 4899999999999999863 99999999999
Q ss_pred cccCC
Q 011722 475 MISGE 479 (479)
Q Consensus 475 ~~~~~ 479 (479)
|++++
T Consensus 617 L~~~~ 621 (634)
T KOG1169|consen 617 LMKAA 621 (634)
T ss_pred hhccc
Confidence 98753
No 2
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-63 Score=507.36 Aligned_cols=394 Identities=30% Similarity=0.481 Sum_probs=292.6
Q ss_pred ccccchheehhhhcCCcc--------eeecccccccccccccchhhhhhhhh---hhcCCC----------CCCCCCCCC
Q 011722 10 IAARSSMIDSIRGCGLSG--------MRIDKEDLRRKLSIPEYLRVAMSNAI---RRKEGE----------PPADTCQSD 68 (479)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~yl~~~~~~~~---~~~~~~----------~~~~~~~~~ 68 (479)
+-|-||-|+.+-=-.+.. -.|.+|.+..+|++|+||+...+-.. .+|.++ .+......+
T Consensus 274 ivAisCSWCKqayH~KvtCFml~~iEEpCslGahaavivPPTWIlr~~~pqnslkaskkkkRtsfkRKasKkg~ee~k~r 353 (1004)
T KOG0782|consen 274 IVAISCSWCKQAYHLKVTCFMLDKIEEPCSLGAHAAVIVPPTWILRLANPQNSLKASKKKKRTSFKRKASKKGHEENKGR 353 (1004)
T ss_pred EEEEEehHHHHHhhcchhhhhhhhhhccccccccceeecCchHheeecCccchhhhhhhcccCchhhhhhhccchhccCC
Confidence 556677775332222221 17999999999999999987654321 111111 111111222
Q ss_pred ccccCCCCCCCCCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCc
Q 011722 69 VIVDGNGVQPPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQK 148 (479)
Q Consensus 69 ~~~~~~~~~~~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~ 148 (479)
.+.++..++++++|++|||||+|||++|.+.++.|.++|+++||||++..+|.. +-++-+ ...+
T Consensus 354 pFvikPtsSplmkPLLVFVNPKSGGNqGsK~lq~f~WyLNPRQVFDlsq~GPK~--------aLEmyR--------KV~n 417 (1004)
T KOG0782|consen 354 PFVIKPTSSPLMKPLLVFVNPKSGGNQGSKALQTFCWYLNPRQVFDLSQLGPKF--------ALEMYR--------KVVN 417 (1004)
T ss_pred ceEEccCCCCCCCceEEEecCCCCCcchHHHHHHHHHhcChhhheehhccCcHH--------HHHHHH--------hccc
Confidence 444577788999999999999999999999999999999999999999876643 223322 2356
Q ss_pred cEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeee
Q 011722 149 MRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSW 228 (479)
Q Consensus 149 ~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~ 228 (479)
.||++|||||||+|+|+.|+.++. .+.||+||+|+||||||||+|+||++|..+ .+.++|+++++|.++.+|+|
T Consensus 418 LRILaCGGDGTVGWiLStLD~L~l---~p~PPvailPLGTGNDLARtlnWGGgytDE---PvSkil~~ve~gtvVqLDRW 491 (1004)
T KOG0782|consen 418 LRILACGGDGTVGWILSTLDNLNL---PPYPPVAILPLGTGNDLARTLNWGGGYTDE---PVSKILQAVEHGTVVQLDRW 491 (1004)
T ss_pred eEEEEecCCCceeehhhhhhhcCC---CCCCCeeEeecCCcchHHHhcccCCCcCcc---hHHHHHHHHhcCcEEeeeee
Confidence 899999999999999999998764 678999999999999999999999999976 57889999999999999999
Q ss_pred EEEEecCCCCcCCCCCCCCCCccccccccccccCCCCCcccceeceEeeEEeeehhHHHhhHhhhhcccCCCccccCCCc
Q 011722 229 HAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISN 308 (479)
Q Consensus 229 ~i~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~rl~n 308 (479)
.+.+ .|+... ...+ .|+|.. +.+| -.+|.||||+||||+|..+||++|+.+|++|++||+|
T Consensus 492 ~lhv-EpNp~~-------~pEe---~ddG~~--~~LP------L~VfnNYFSlGfDAHVtLeFHeSReANPekfNSRfrN 552 (1004)
T KOG0782|consen 492 RLHV-EPNPSC-------NPEE---EDDGMQ--SALP------LTVFNNYFSLGFDAHVTLEFHESREANPEKFNSRFRN 552 (1004)
T ss_pred eecc-cCCCCC-------Chhh---hcccch--hccc------hhHhhccccccccceEEEEeccccccCHHHHHHHHhh
Confidence 9987 343321 1111 233332 2334 3689999999999999999999999999999999999
Q ss_pred ceeeecccccccccccccCCCCcccccccceeeeEeeeecCCceEEeeCCcceEEEEeccCCCCcCCCCCCCCCchhhhc
Q 011722 309 KLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEK 388 (479)
Q Consensus 309 kl~Y~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~i~~v~~~~~e~~~~~~~~~~ivv~N~~~~ggG~~~wg~~~p~~~~~ 388 (479)
|++|+..++..++ ..+ ++.+.+.+++.++.++.. -+..+ -+..+|+++|+++|.+|..|||++.. .
T Consensus 553 kmfYaG~afsDfl-~rS------skDL~khi~vvCDG~DlT-PkIqe--LK~qCivFlNIprYcaGTmPWG~pgd----h 618 (1004)
T KOG0782|consen 553 KMFYAGLAFSDFL-KRS------SKDLCKHITVVCDGVDLT-PKIQE--LKLQCIVFLNIPRYCAGTMPWGEPGD----H 618 (1004)
T ss_pred hhhhcchhHHHHH-hhh------hHHhhhheEEEecCccCC-hhhhh--cccceEEEecchhhhcCccCCCCCCc----c
Confidence 9999999987743 211 233444444443322211 01112 25789999999999999999998642 2
Q ss_pred cCCccccCCCCeeEEEEEccchhHHHHHHhhccceEEeeeeEEEEEecCCccccceEEecCCccCCCCCCCCceEEEEEe
Q 011722 389 KGFVEAHADDGLLEIFGLKQGWHASFVMVELISAKHIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKR 468 (479)
Q Consensus 389 ~~~~~a~~dDGlLeVv~~~~~~~~~~l~~~l~~g~~l~q~~~i~I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~v~i~~ 468 (479)
..|..++.|||.+||++|+-.+...+.+. .+|.+++||++|++.+. +.+|||+||||+.+.| ..|.|..
T Consensus 619 hDfePqrhdDGyvEViGFTmasLAALQvG--GhGERl~QCreV~l~T~----KaIPmQVDGEPC~LAp-----s~Iri~l 687 (1004)
T KOG0782|consen 619 HDFEPQRHDDGYVEVIGFTMASLAALQVG--GHGERLAQCREVRLITN----KAIPMQVDGEPCLLAP-----SIIRIGL 687 (1004)
T ss_pred ccCCccccCCceEEEEeeeHHHHHHHhhc--CcchhhhhceeEEEEec----cccceeecCcchhcch-----hheEEee
Confidence 45678889999999999996443332222 37899999999999876 8899999999998775 4566654
Q ss_pred e
Q 011722 469 V 469 (479)
Q Consensus 469 ~ 469 (479)
-
T Consensus 688 r 688 (1004)
T KOG0782|consen 688 R 688 (1004)
T ss_pred c
Confidence 3
No 3
>PRK12361 hypothetical protein; Provisional
Probab=100.00 E-value=2.3e-44 Score=390.51 Aligned_cols=349 Identities=21% Similarity=0.215 Sum_probs=252.1
Q ss_pred heehhhhcCCcc-eeecccccccccccccchhhhhh----hhhhhcCCCCCCCCCCCCcc----c--cCCCCCCCCCcEE
Q 011722 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVAMS----NAIRRKEGEPPADTCQSDVI----V--DGNGVQPPEAPMV 84 (479)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~~~~----~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~l 84 (479)
.++..++.|.+| |||..|..|+..++.+||..... +.-.+..+++|+...+|... + .+......+++++
T Consensus 167 ~i~~~~~~~~~VlVHC~~G~sRSa~vv~ayLm~~~~~~~~~eA~~~vr~~Rp~v~~n~~q~~~l~~~~~~~~~~~~~~~~ 246 (547)
T PRK12361 167 WIHRQVRANKSVVVHCALGRGRSVLVLAAYLLCKDPDLTVEEVLQQIKQIRKTARLNKRQLRALEKMLEQGKLNIHKRAW 246 (547)
T ss_pred HHHHHHHCCCeEEEECCCCCCcHHHHHHHHHHHhccCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHcCCcccCCceE
Confidence 446778889999 99999999999999999985421 22244455566555555521 1 2456666789999
Q ss_pred EEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhHHHHH
Q 011722 85 VFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVL 164 (479)
Q Consensus 85 vivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv~~Vl 164 (479)
+|+||+||++++.+.++++++.|.+. +++.+ +.|+..++++++++++. ..+.+.||++|||||||||+
T Consensus 247 iI~NP~SG~g~~~~~~~~i~~~L~~~--~~~~v-----~~t~~~~~a~~la~~~~-----~~~~d~Viv~GGDGTl~ev~ 314 (547)
T PRK12361 247 LIANPVSGGGKWQEYGEQIQRELKAY--FDLTV-----KLTTPEISAEALAKQAR-----KAGADIVIACGGDGTVTEVA 314 (547)
T ss_pred EEECCCCCCCcHHHHHHHHHHHHhcC--CceEE-----EECCCCccHHHHHHHHH-----hcCCCEEEEECCCcHHHHHH
Confidence 99999999999999999999999864 55544 23556688899987753 24568999999999999999
Q ss_pred HHHhhccccCCCCCCcEEeecCCCcccccccc-CCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEEecCCCCcCCCC
Q 011722 165 GSVGELNKQGREPVPPVAIIPLGTGNDLSRSF-GWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEVVDPP 243 (479)
Q Consensus 165 ~~l~~~~~~~~~~~~plgiIPlGTgNDfArsl-g~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~~~~~~~~~~~~p 243 (479)
|++.+ .++||||||+||||||||+| |++... .++.++++ .+.+|.+++||++.+
T Consensus 315 ~~l~~-------~~~~lgiiP~GTgNdfAr~L~gi~~~~-~~~~~a~~----~i~~g~~~~iD~g~v------------- 369 (547)
T PRK12361 315 SELVN-------TDITLGIIPLGTANALSHALFGLGSKL-IPVEQACD----NIIQGHTQRIDTARC------------- 369 (547)
T ss_pred HHHhc-------CCCCEEEecCCchhHHHHHhcCCCCCC-ccHHHHHH----HHHhCCCeEEEEEEE-------------
Confidence 99975 56899999999999999999 996421 24555554 467899999999764
Q ss_pred CCCCCCccccccccccccCCCCCcccceeceEeeEEeeehhHHHhhHhhhhcccCCCccccCCCcceeeecccccccccc
Q 011722 244 HSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFL 323 (479)
Q Consensus 244 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~rl~nkl~Y~~~~~~~~~f~ 323 (479)
++++|+|++|+||||+|++.+++.+ |. ++ |+++|+..+++.++.
T Consensus 370 ---------------------------n~~~fln~agiG~da~v~~~~~~~~--k~-----~~-G~laY~~~~~~~l~~- 413 (547)
T PRK12361 370 ---------------------------NDRLMLLLVGIGFEQKMIESADRER--KN-----AL-GQLAYLDGLWRAVNE- 413 (547)
T ss_pred ---------------------------cCeEEEEEEeechhHHHHHhccHHH--Hh-----cc-CHHHHHHHHHHHhhc-
Confidence 2479999999999999999887654 21 23 889999876654321
Q ss_pred cccCCCCcccccccceeeeEeeeecCCceEEeeCCcceEEEEeccCCCCcCCCCCCCCCchhhhccCCccccCCCCeeEE
Q 011722 324 TPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLEI 403 (479)
Q Consensus 324 ~~~~~~~~~~~l~~~~~~~i~~v~~~~~e~~~~~~~~~~ivv~N~~~~ggG~~~wg~~~p~~~~~~~~~~a~~dDGlLeV 403 (479)
.+..+++++ ++ +.+... .++.+++++|+++|++... .|. +.+++|||+|||
T Consensus 414 ------------~~~~~l~i~-~d--g~~~~~--~~~~~l~v~N~~~~~~~~~-~Gg-----------g~~~~~DG~Ldv 464 (547)
T PRK12361 414 ------------NETLTLTVT-LD--DAEPQT--ISTHSLVVANAAPFTSLLA-QGG-----------GEPNMTDGLLDI 464 (547)
T ss_pred ------------CCCeeEEEE-EC--CCCceE--EEEEEEEEEcCCCcccccc-cCC-----------CCCCCCCceeEE
Confidence 112344443 33 222222 2578889999977654221 111 245799999999
Q ss_pred EEEccch----hHHHH----HHhhc-----cceEEeeeeEEEEEecCCccccceEEecCCccCCCCCCCCceEEEEEeec
Q 011722 404 FGLKQGW----HASFV----MVELI-----SAKHIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVP 470 (479)
Q Consensus 404 v~~~~~~----~~~~l----~~~l~-----~g~~l~q~~~i~I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~v~i~~~p 470 (479)
+++++.. ++..+ +.+.. ...+..++++++|++. +++++|+|||++.. ++++|+..|
T Consensus 465 ~~v~~~~~~~~~l~~l~~~~~~g~~~~~~~~~v~~~~~k~v~I~~~----~~~~~~iDGE~~~~-------~p~~i~v~p 533 (547)
T PRK12361 465 TWLDSGGEPGEQLLSLAELALSGLGKEPEANKVHHAHAKKVTISSQ----KPIKYVIDGELFED-------EDLTIEVQP 533 (547)
T ss_pred EEEcCCCcchHHHHHHHHHHHHHhcccCCCCceEEEEeeEEEEEeC----CceEEEECCccCCc-------eEEEEEEec
Confidence 9998743 33322 22211 2345678999999976 67899999999863 569999999
Q ss_pred ccccccc
Q 011722 471 FQSLMIS 477 (479)
Q Consensus 471 ~~~~~~~ 477 (479)
....++.
T Consensus 534 ~al~vlv 540 (547)
T PRK12361 534 ASLKVFV 540 (547)
T ss_pred CceEEEe
Confidence 9887764
No 4
>PRK11914 diacylglycerol kinase; Reviewed
Probab=100.00 E-value=7.8e-43 Score=352.65 Aligned_cols=286 Identities=22% Similarity=0.231 Sum_probs=215.6
Q ss_pred CCCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 79 ~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
.++++++|+||+||++++.+.++++.+.|.+. .+++.+ +.|+..++++++++++. ..+.|.|||+||||
T Consensus 7 ~~~~~~iI~NP~sG~g~~~~~~~~~~~~l~~~-g~~~~~-----~~t~~~~~~~~~a~~~~-----~~~~d~vvv~GGDG 75 (306)
T PRK11914 7 EIGKVTVLTNPLSGHGAAPHAAERAIARLHHR-GVDVVE-----IVGTDAHDARHLVAAAL-----AKGTDALVVVGGDG 75 (306)
T ss_pred CCceEEEEECCCCCCCcHHHHHHHHHHHHHHc-CCeEEE-----EEeCCHHHHHHHHHHHH-----hcCCCEEEEECCch
Confidence 46899999999999999888898998888664 466554 23556789999987753 24568999999999
Q ss_pred hHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCC-cHHHHHHHHHHHHHcCCceeeeeeEEEEecCCC
Q 011722 159 TVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPF-AWKSAVKRTLQRASAGPICRLDSWHAVIQMPSG 237 (479)
Q Consensus 159 Tv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~-~~~~al~~~l~~i~~g~~~~iD~~~i~~~~~~~ 237 (479)
|||+|+++|.. .++||||||+||+|||||+||+ |. ++.++++ .+.+|+++++|++++...
T Consensus 76 Ti~evv~~l~~-------~~~~lgiiP~GT~NdfAr~lg~----~~~~~~~a~~----~i~~g~~~~iDlg~v~~~---- 136 (306)
T PRK11914 76 VISNALQVLAG-------TDIPLGIIPAGTGNDHAREFGI----PTGDPEAAAD----VIVDGWTETVDLGRIQDD---- 136 (306)
T ss_pred HHHHHhHHhcc-------CCCcEEEEeCCCcchhHHHcCC----CCCCHHHHHH----HHHcCCceEEEEEEEecC----
Confidence 99999999964 5689999999999999999999 43 4545544 467899999999987320
Q ss_pred CcCCCCCCCCCCccccccccccccCCCCCcccceeceEeeEEeeehhHHHhhHhhhhcccCCCccccCCCcceeeecccc
Q 011722 238 EVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSC 317 (479)
Q Consensus 238 ~~~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~rl~nkl~Y~~~~~ 317 (479)
++ ..++|+|++|+||||.|++..++.|+ ++ ++++|...++
T Consensus 137 -----------------------~~--------~~~~f~n~~~~G~~a~v~~~~~~~k~--------~~-G~~aY~~~~l 176 (306)
T PRK11914 137 -----------------------DG--------IVKWFGTVAATGFDSLVTDRANRMRW--------PH-GRMRYNLAML 176 (306)
T ss_pred -----------------------CC--------CcEEEEEEEeeehHHHHHHHHHhccc--------cC-CchhhHHHHH
Confidence 00 13799999999999999988865432 23 7889998777
Q ss_pred cccccccccCCCCcccccccceeeeEeeeecCCceEEeeCCcceEEEEeccCCCCcCCCCCCCCCchhhhccCCccccCC
Q 011722 318 TQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHAD 397 (479)
Q Consensus 318 ~~~~f~~~~~~~~~~~~l~~~~~~~i~~v~~~~~e~~~~~~~~~~ivv~N~~~~ggG~~~wg~~~p~~~~~~~~~~a~~d 397 (479)
+.++- .+..+++++ ++ +++.++ .++.++.|+|+++||||+.+ + |+++++
T Consensus 177 ~~l~~-------------~~~~~~~i~-~d--g~~~~~--~~~~~~~v~N~~~~GG~~~~----~---------p~a~~~ 225 (306)
T PRK11914 177 AELSK-------------LRPLPFRLV-LD--GTEEIV--TDLTLAAFGNTRSYGGGMLI----C---------PNADHT 225 (306)
T ss_pred HHHHh-------------cCCCcEEEE-Ee--CCeEEE--eeEEEEEEeCcccccCCcee----C---------CCCcCC
Confidence 65421 112344443 33 224333 45888999999999999875 3 689999
Q ss_pred CCeeEEEEEccchhH--HHHHHhhccceE-------EeeeeEEEEEecCCccccceEEecCCccCCCCCCCCceEEEEEe
Q 011722 398 DGLLEIFGLKQGWHA--SFVMVELISAKH-------IAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKR 468 (479)
Q Consensus 398 DGlLeVv~~~~~~~~--~~l~~~l~~g~~-------l~q~~~i~I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~v~i~~ 468 (479)
||+|||++++....+ ..++..+..|+| ..++++++|++. ++++++|||+... ++++|+.
T Consensus 226 DG~ldv~~v~~~~~~~~l~~~~~~~~g~~~~~~~v~~~~~~~i~i~~~-----~~~~~~DGE~~~~-------~p~~i~v 293 (306)
T PRK11914 226 DGLLDITMVQSASRTRLLRLFPTVFKGTHVELDEVSTARAKTVHVECP-----GINAYADGDFACP-------LPAEISA 293 (306)
T ss_pred CCcEEEEEEecCCHHHHHHHHHHhcCCcccCCCcEEEEEeEEEEEEcC-----CcceecCCCcCCC-------CceEEEE
Confidence 999999999875443 334555555544 357899999864 3689999999763 3599999
Q ss_pred ecccccccc
Q 011722 469 VPFQSLMIS 477 (479)
Q Consensus 469 ~p~~~~~~~ 477 (479)
+|....++.
T Consensus 294 ~p~al~v~v 302 (306)
T PRK11914 294 VPGALQILR 302 (306)
T ss_pred EcCeEEEEC
Confidence 999888765
No 5
>PRK13057 putative lipid kinase; Reviewed
Probab=100.00 E-value=9.8e-43 Score=348.89 Aligned_cols=274 Identities=20% Similarity=0.254 Sum_probs=207.6
Q ss_pred EEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhHHHH
Q 011722 84 VVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWV 163 (479)
Q Consensus 84 lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv~~V 163 (479)
++|+||.||+++ +.++++++.|... .+++... .|+..+++++++++. ..+.++|||+|||||||+|
T Consensus 1 ~~I~Np~sg~~~--~~~~~i~~~l~~~-g~~~~~~-----~t~~~~~a~~~~~~~------~~~~d~iiv~GGDGTv~~v 66 (287)
T PRK13057 1 LLLVNRHARSGR--AALAAARAALEAA-GLELVEP-----PAEDPDDLSEVIEAY------ADGVDLVIVGGGDGTLNAA 66 (287)
T ss_pred CEEECCCCCCcc--hhHHHHHHHHHHc-CCeEEEE-----ecCCHHHHHHHHHHH------HcCCCEEEEECchHHHHHH
Confidence 479999999776 4678888888765 3555542 355678888888753 2457899999999999999
Q ss_pred HHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEEecCCCCcCCCC
Q 011722 164 LGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEVVDPP 243 (479)
Q Consensus 164 l~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~~~~~~~~~~~~p 243 (479)
+|+|.. .++|||+||+||||||||+||+ |.++.++++ .+..|+++++|++++
T Consensus 67 ~~~l~~-------~~~~lgiiP~GT~Ndfar~Lg~----~~~~~~a~~----~i~~~~~~~vD~g~~------------- 118 (287)
T PRK13057 67 APALVE-------TGLPLGILPLGTANDLARTLGI----PLDLEAAAR----VIATGQVRRIDLGWV------------- 118 (287)
T ss_pred HHHHhc-------CCCcEEEECCCCccHHHHHcCC----CCCHHHHHH----HHHcCCeEEeeEEEE-------------
Confidence 999975 5689999999999999999999 556666554 466899999999865
Q ss_pred CCCCCCccccccccccccCCCCCcccceeceEeeEEeeehhHHHhhHhhhhcccCCCccccCCCcceeeecccccccccc
Q 011722 244 HSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFL 323 (479)
Q Consensus 244 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~rl~nkl~Y~~~~~~~~~f~ 323 (479)
++++|+|++|+||||+|+++++..+ | .++ |+++|+..+++.++-
T Consensus 119 ---------------------------~~~~f~n~~g~G~da~v~~~~~~~~--k-----~~~-G~~aY~~~~~~~l~~- 162 (287)
T PRK13057 119 ---------------------------NGHYFFNVASLGLSAELARRLTKEL--K-----RRW-GTLGYAIAALRVLRR- 162 (287)
T ss_pred ---------------------------CCEEEEEEEecCccHHHHHHhhHHh--h-----ccC-ChhHHHHHHHHHHhh-
Confidence 2479999999999999999887543 1 133 889999877665321
Q ss_pred cccCCCCcccccccceeeeEeeeecCCceEEeeCCcceEEEEeccCCCCcCCCCCCCCCchhhhccCCccccCCCCeeEE
Q 011722 324 TPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLEI 403 (479)
Q Consensus 324 ~~~~~~~~~~~l~~~~~~~i~~v~~~~~e~~~~~~~~~~ivv~N~~~~ggG~~~wg~~~p~~~~~~~~~~a~~dDGlLeV 403 (479)
. +.+++++. ++ ++... .+..+++|+|+++||||+.+ + |+++++||+|||
T Consensus 163 -----------~-~~~~~~l~-~d---~~~~~--~~~~~~~v~N~~~~gg~~~~----~---------p~a~~~DG~ldv 211 (287)
T PRK13057 163 -----------S-RPFTAEIE-HD---GRTER--VKTLQVAVGNGRYYGGGMTV----A---------HDATIDDGRLDL 211 (287)
T ss_pred -----------C-CCeEEEEE-EC---CEEEE--EEEEEEEEecCcccCCCccc----C---------CCCCCCCceEEE
Confidence 1 12344433 22 34443 25778899999999999875 3 689999999999
Q ss_pred EEEccch--hHHHHHHhhccce-------EEeeeeEEEEEecCCccccceEEecCCccCCCCCCCCceEEEEEeeccccc
Q 011722 404 FGLKQGW--HASFVMVELISAK-------HIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSL 474 (479)
Q Consensus 404 v~~~~~~--~~~~l~~~l~~g~-------~l~q~~~i~I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~v~i~~~p~~~~ 474 (479)
++++... .+..++..+..|+ +..++++++|+++ +++++|+|||.+.. ++++|+.+|....
T Consensus 212 ~~v~~~~~~~~l~~~~~~~~g~~~~~~~v~~~~~~~~~i~~~----~~~~~~~DGE~~~~-------~p~~i~v~p~al~ 280 (287)
T PRK13057 212 YSLEVAHWWRLLALLPALRRGRHGEWPDVRAFRTTELELRTR----KPRPINTDGELTTY-------TPAHFRVLPKALR 280 (287)
T ss_pred EEecCCCHHHHHHHHHHHhcCCccCCCcEEEEEeeEEEEEeC----CCcEEeeCCccCCC-------CCEEEEEECCeEE
Confidence 9998743 3344455554443 4568999999986 67899999999864 3499999999887
Q ss_pred ccc
Q 011722 475 MIS 477 (479)
Q Consensus 475 ~~~ 477 (479)
++.
T Consensus 281 v~~ 283 (287)
T PRK13057 281 VLA 283 (287)
T ss_pred EEc
Confidence 764
No 6
>TIGR03702 lip_kinase_YegS lipid kinase YegS. Members of this protein family are designated YegS, an apparent lipid kinase family in the Proteobacteria. Bakali, et al. report phosphatidylglycerol kinase activity for the member from Escherichia coli, but refrain from calling that activity synonymous with its biological role. Note that a broader, subfamily-type model (TIGR00147), includes this family but also multiple paralogs in some species and varied functions.
Probab=100.00 E-value=3.3e-42 Score=346.06 Aligned_cols=281 Identities=19% Similarity=0.187 Sum_probs=204.9
Q ss_pred cEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhHH
Q 011722 82 PMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVG 161 (479)
Q Consensus 82 ~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv~ 161 (479)
++++|+||+||.. +.+.++.+.|.+. .+++.+ +.|++.+|++++++++. ..+.+.|||+|||||||
T Consensus 1 ~~~~I~N~~~~~~---~~~~~~~~~l~~~-g~~~~v-----~~t~~~~~a~~~a~~~~-----~~~~d~vv~~GGDGTi~ 66 (293)
T TIGR03702 1 KALLILNGKQADN---EDVREAVGDLRDE-GIQLHV-----RVTWEKGDAQRYVAEAL-----ALGVSTVIAGGGDGTLR 66 (293)
T ss_pred CEEEEEeCCccch---hHHHHHHHHHHHC-CCeEEE-----EEecCCCCHHHHHHHHH-----HcCCCEEEEEcCChHHH
Confidence 4789999998843 2455566667654 355544 23556789999987753 24568999999999999
Q ss_pred HHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEEecCCCCcCC
Q 011722 162 WVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEVVD 241 (479)
Q Consensus 162 ~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~~~~~~~~~~~ 241 (479)
+|+|+|..... ...+||||||+||||||||+||+ |.++.++++ .+..|+++++|++++.
T Consensus 67 ev~ngl~~~~~---~~~~~lgiiP~GTgNdfAr~l~i----p~~~~~a~~----~i~~g~~~~iDlg~v~---------- 125 (293)
T TIGR03702 67 EVATALAQIRD---DAAPALGLLPLGTANDFATAAGI----PLEPAKALK----LALNGAAQPIDLARVN---------- 125 (293)
T ss_pred HHHHHHHhhCC---CCCCcEEEEcCCchhHHHHhcCC----CCCHHHHHH----HHHhCCceeeeEEEEC----------
Confidence 99999975321 23578999999999999999999 556656555 4568999999998651
Q ss_pred CCCCCCCCccccccccccccCCCCCcccceeceEeeEEeeehhHHHhhHhhhhcccCCCccccCCCcceeeecccccccc
Q 011722 242 PPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGW 321 (479)
Q Consensus 242 ~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~rl~nkl~Y~~~~~~~~~ 321 (479)
+ .++|+|.+|+||||+|++.+++.. | +..|+++|+..+++.++
T Consensus 126 --------------------~---------~~~f~n~~~~G~da~v~~~~~~~~--k------~~~G~~aY~~~~l~~l~ 168 (293)
T TIGR03702 126 --------------------G---------KHYFLNMATGGFGTRVTTETSEKL--K------KALGGAAYLITGLTRFS 168 (293)
T ss_pred --------------------C---------ccEEEEEeecccchHhhhhhhHHH--H------hccchHHHHHHHHHHHh
Confidence 0 269999999999999999987632 2 12388999988776532
Q ss_pred cccccCCCCcccccccceeeeEeeeecCCceEEeeCCcceEEEEeccCCCCcCCCCCCCCCchhhhccCCccccCCCCee
Q 011722 322 FLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDGLL 401 (479)
Q Consensus 322 f~~~~~~~~~~~~l~~~~~~~i~~v~~~~~e~~~~~~~~~~ivv~N~~~~ggG~~~wg~~~p~~~~~~~~~~a~~dDGlL 401 (479)
. . +..++++ +.++ +.+ ..++.+++|+|++|||||+.+ + |+|+++||+|
T Consensus 169 ~------------~-~~~~~~i---~~~~-~~~--~~~~~~~~v~N~~~~GGg~~i----~---------P~A~~~DG~L 216 (293)
T TIGR03702 169 E------------L-TAASCEF---RGPD-FHW--EGDFLALGIGNGRQAGGGQVL----C---------PDALINDGLL 216 (293)
T ss_pred h------------C-CCeEEEE---EECC-EEE--EeeEEEEEEECCCcCCCCcee----C---------CCCccCCceE
Confidence 1 1 1233443 3322 322 235788999999999999975 3 6899999999
Q ss_pred EEEEEccchhHHHHHHhhccceE---E--eeeeEEEEEecCCccccceEEecCCccCCCCCCCCceEEEEEeeccccccc
Q 011722 402 EIFGLKQGWHASFVMVELISAKH---I--AQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLMI 476 (479)
Q Consensus 402 eVv~~~~~~~~~~l~~~l~~g~~---l--~q~~~i~I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~v~i~~~p~~~~~~ 476 (479)
||++++..+.+..++..+..|++ + .++++++|++. +++++|+|||++.. ++++|+.+|....++
T Consensus 217 dv~~v~~~~~~~~~l~~~~~g~~~~~~~~~~~~~i~i~~~----~~~~~~vDGE~~~~-------~p~~i~v~p~al~v~ 285 (293)
T TIGR03702 217 DVRILPAPELLPATLSTLFGGDKNPEFVRARLPWLEIEAP----QPLTFNLDGEPLSG-------RHFRIEVLPGALRCH 285 (293)
T ss_pred EEEEeCCHHHHHHHHHHHhcCCCCCcEEEEEcCEEEEEeC----CCcEEEECCCcCCC-------ceEEEEEEcCeEEEE
Confidence 99999884444344455554432 2 35678899875 67999999999863 469999999998877
Q ss_pred c
Q 011722 477 S 477 (479)
Q Consensus 477 ~ 477 (479)
.
T Consensus 286 ~ 286 (293)
T TIGR03702 286 L 286 (293)
T ss_pred c
Confidence 5
No 7
>PRK13059 putative lipid kinase; Reviewed
Probab=100.00 E-value=6.4e-42 Score=344.34 Aligned_cols=281 Identities=19% Similarity=0.177 Sum_probs=206.1
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchh
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGT 159 (479)
++++++|+||.||++++.+.++++++.|.+. .+++....++. ..+. +.++++. ....+.||++|||||
T Consensus 1 ~~~~~~I~NP~aG~g~~~~~~~~i~~~l~~~-g~~~~~~~~~~-----~~~~-~~~~~~~-----~~~~d~vi~~GGDGT 68 (295)
T PRK13059 1 MKKVKFIYNPYSGENAIISELDKVIRIHQEK-GYLVVPYRISL-----EYDL-KNAFKDI-----DESYKYILIAGGDGT 68 (295)
T ss_pred CcEEEEEECCcccchhHHHHHHHHHHHHHHC-CcEEEEEEccC-----cchH-HHHHHHh-----hcCCCEEEEECCccH
Confidence 4679999999999998878888888888765 36655432221 1222 3333321 245689999999999
Q ss_pred HHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEEecCCCCc
Q 011722 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEV 239 (479)
Q Consensus 160 v~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~~~~~~~~~ 239 (479)
||+|+|+|.+. ..++||||||+||||||||+||+ |.++.+|++. +..|+.+++|++++
T Consensus 69 v~evv~gl~~~-----~~~~~lgviP~GTgNdfAr~lgi----~~~~~~a~~~----i~~g~~~~vDlg~v--------- 126 (295)
T PRK13059 69 VDNVVNAMKKL-----NIDLPIGILPVGTANDFAKFLGM----PTDIGEACEQ----ILKSKPKKVDLGKI--------- 126 (295)
T ss_pred HHHHHHHHHhc-----CCCCcEEEECCCCHhHHHHHhCC----CCCHHHHHHH----HHhCCcEEeeEEEE---------
Confidence 99999999863 25689999999999999999999 6676666664 56899999999865
Q ss_pred CCCCCCCCCCccccccccccccCCCCCcccceeceEeeEEeeehhHHHhhHhhhhcccCCCccccCCCcceeeecccccc
Q 011722 240 VDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQ 319 (479)
Q Consensus 240 ~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~rl~nkl~Y~~~~~~~ 319 (479)
++++|+|++|+||||+|++.++... ++ ++ |+++|+..+++.
T Consensus 127 -------------------------------~~~~f~n~~~~G~~a~v~~~~~~~~-k~------~~-G~~aY~~~~~~~ 167 (295)
T PRK13059 127 -------------------------------NDKYFINVASTGLFTDVSQKTDVNL-KN------TI-GKLAYYLKGLEE 167 (295)
T ss_pred -------------------------------CCEEEEEEEeeeechhhhhhccHHH-hh------Cc-chHHHHHHHHHH
Confidence 2479999999999999999886532 11 23 889999888765
Q ss_pred cccccccCCCCcccccccceeeeEeeeecCCceEEeeCCcceEEEEeccCCCCcCCCCCCCCCchhhhccCCccccCCCC
Q 011722 320 GWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDG 399 (479)
Q Consensus 320 ~~f~~~~~~~~~~~~l~~~~~~~i~~v~~~~~e~~~~~~~~~~ivv~N~~~~ggG~~~wg~~~p~~~~~~~~~~a~~dDG 399 (479)
++.. +..+++++ ++ ++.++ .++.+++|+|+++||| +.+ + |+|+++||
T Consensus 168 l~~~-------------~~~~~~i~-~d---~~~~~--~~~~~~~v~N~~~~Gg-~~~----~---------p~a~~~DG 214 (295)
T PRK13059 168 LPNF-------------RKLKVKVT-SE---EVNFD--GDMYLMLVFNGQTAGN-FNL----A---------YKAEVDDG 214 (295)
T ss_pred HhcC-------------CCeeEEEE-EC---CEEEE--eeEEEEEEEcCccccC-ccc----C---------CcccCCCC
Confidence 4211 12344443 32 34443 4578889999998875 554 3 68999999
Q ss_pred eeEEEEEccchhH--HHHHHhhccc--------eEEeeeeEEEEEecCCccccceEEecCCccCCCCCCCCceEEEEEee
Q 011722 400 LLEIFGLKQGWHA--SFVMVELISA--------KHIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRV 469 (479)
Q Consensus 400 lLeVv~~~~~~~~--~~l~~~l~~g--------~~l~q~~~i~I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~v~i~~~ 469 (479)
+|||+++++...+ ..++..+..| .+..++++++|++. +++++|+|||+... ++++|+.+
T Consensus 215 ~Ldv~i~~~~~~~~~l~~~~~~~~G~~~~~~~~v~~~~~~~i~i~~~----~~~~~~~DGE~~~~-------~p~~i~v~ 283 (295)
T PRK13059 215 LLDVIIIKACPIIDLIPLFIKVLKGEHLEDVNGLIYFKTDKLEIESN----EEIVTDIDGERGPD-------FPLNIECI 283 (295)
T ss_pred eEEEEEEcCCCHHHHHHHHHHHHcCCccCCCccEEEEEeeEEEEEeC----CCceEEeCCCcCCC-------CcEEEEEe
Confidence 9999999885443 3344445444 34457889999876 67899999999764 35999999
Q ss_pred cccccccc
Q 011722 470 PFQSLMIS 477 (479)
Q Consensus 470 p~~~~~~~ 477 (479)
|....++.
T Consensus 284 p~al~v~~ 291 (295)
T PRK13059 284 KGGLKVLG 291 (295)
T ss_pred cCeeEEEe
Confidence 99888775
No 8
>PRK13337 putative lipid kinase; Reviewed
Probab=100.00 E-value=4.2e-42 Score=347.03 Aligned_cols=283 Identities=18% Similarity=0.176 Sum_probs=213.9
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchh
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGT 159 (479)
++++++|+||+||++++.+.+.++...|.+.. +++.. ..|++.+|++++++++. ..+.+.||++|||||
T Consensus 1 ~~r~~~I~Np~aG~~~~~~~~~~~~~~l~~~~-~~~~~-----~~t~~~~~a~~~a~~~~-----~~~~d~vvv~GGDGT 69 (304)
T PRK13337 1 MKRARIIYNPTSGRELFKKNLPDVLQKLEQAG-YETSA-----HATTGPGDATLAAERAV-----ERKFDLVIAAGGDGT 69 (304)
T ss_pred CceEEEEECCcccchhHHHHHHHHHHHHHHcC-CEEEE-----EEecCCCCHHHHHHHHH-----hcCCCEEEEEcCCCH
Confidence 46899999999999887778888888776653 55443 23556789999987653 245689999999999
Q ss_pred HHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEEecCCCCc
Q 011722 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEV 239 (479)
Q Consensus 160 v~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~~~~~~~~~ 239 (479)
||+|+|+|... ...+||||||.||||||||+||+ |.++.++++ .+..|.++++|++++
T Consensus 70 l~~vv~gl~~~-----~~~~~lgiiP~GT~NdfAr~lgi----~~~~~~a~~----~i~~g~~~~vDlg~v--------- 127 (304)
T PRK13337 70 LNEVVNGIAEK-----ENRPKLGIIPVGTTNDFARALHV----PRDIEKAAD----VIIEGHTVPVDIGKA--------- 127 (304)
T ss_pred HHHHHHHHhhC-----CCCCcEEEECCcCHhHHHHHcCC----CCCHHHHHH----HHHcCCeEEEEEEEE---------
Confidence 99999999763 24689999999999999999999 566666655 456899999999865
Q ss_pred CCCCCCCCCCccccccccccccCCCCCcccceeceEeeEEeeehhHHHhhHhhhhcccCCCccccCCCcceeeecccccc
Q 011722 240 VDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQ 319 (479)
Q Consensus 240 ~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~rl~nkl~Y~~~~~~~ 319 (479)
++++|+|.+|+|+||+|++.++... |. ++ |+++|+..+++.
T Consensus 128 -------------------------------n~~~fln~~g~G~~a~v~~~~~~~~--k~-----~~-G~~aY~~~~~~~ 168 (304)
T PRK13337 128 -------------------------------NNRYFINIAGGGRLTELTYEVPSKL--KT-----ML-GQLAYYLKGIEM 168 (304)
T ss_pred -------------------------------CCEEEEeeehhhHHHHHHHhcCHHH--hc-----Cc-ccHHHHHHHHHH
Confidence 2489999999999999998876422 21 23 789998877654
Q ss_pred cccccccCCCCcccccccceeeeEeeeecCCceEEeeCCcceEEEEeccCCCCcCCCCCCCCCchhhhccCCccccCCCC
Q 011722 320 GWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDG 399 (479)
Q Consensus 320 ~~f~~~~~~~~~~~~l~~~~~~~i~~v~~~~~e~~~~~~~~~~ivv~N~~~~ggG~~~wg~~~p~~~~~~~~~~a~~dDG 399 (479)
++. . +.++++++ + |++..+ .+...++|+|+++||||+.+ + |++.++||
T Consensus 169 l~~------------~-~~~~~~i~-~---d~~~~~--~~~~~~~v~n~~~~gg~~~~----~---------p~a~~~DG 216 (304)
T PRK13337 169 LPS------------L-KATDVRIE-Y---DGKLFQ--GEIMLFLLGLTNSVGGFEKL----A---------PDASLDDG 216 (304)
T ss_pred Hhh------------C-CCceEEEE-E---CCeEEE--eEEEEEEEEcCcccCCcccc----C---------CcccCCCC
Confidence 211 1 12344443 3 244443 35778999999999999875 3 68999999
Q ss_pred eeEEEEEccc--hhHHHHHHhhccceE-------EeeeeEEEEEecCCccccceEEecCCccCCCCCCCCceEEEEEeec
Q 011722 400 LLEIFGLKQG--WHASFVMVELISAKH-------IAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVP 470 (479)
Q Consensus 400 lLeVv~~~~~--~~~~~l~~~l~~g~~-------l~q~~~i~I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~v~i~~~p 470 (479)
+|||++++.. +.+..++..+..|+| ..++++++|+.+ +++++|+|||+... ++++|+.+|
T Consensus 217 ~ldv~iv~~~~~~~~l~~~~~~~~g~~~~~~~v~~~~~~~~~i~~~----~~~~~~iDGE~~~~-------~p~~i~v~p 285 (304)
T PRK13337 217 YFDLIIVKKANLAELIHIATLALRGEHIKHPKVIYTKANRIKVSSF----DKMQLNLDGEYGGK-------LPAEFENLY 285 (304)
T ss_pred eEEEEEEcCCCHHHHHHHHHHHHcCCcCCCCcEEEEEccEEEEEcC----CCCeEEeCCCcCCC-------CCEEEEEec
Confidence 9999999874 333345555555544 457899999976 67899999999863 359999999
Q ss_pred ccccccc
Q 011722 471 FQSLMIS 477 (479)
Q Consensus 471 ~~~~~~~ 477 (479)
....++.
T Consensus 286 ~al~v~~ 292 (304)
T PRK13337 286 RHIEVFV 292 (304)
T ss_pred ceEEEEe
Confidence 9887764
No 9
>PRK00861 putative lipid kinase; Reviewed
Probab=100.00 E-value=1e-41 Score=343.52 Aligned_cols=281 Identities=20% Similarity=0.203 Sum_probs=209.3
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchh
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGT 159 (479)
+++++||+||.||++++.+.+++++..|.+. +++.. +.|++.+|+.++++++. ..+.+.||++|||||
T Consensus 2 ~~~~~iI~NP~sG~~~~~~~~~~i~~~l~~~--~~~~~-----~~t~~~~~a~~~a~~~~-----~~~~d~vv~~GGDGT 69 (300)
T PRK00861 2 TRSACLIFNPVAGQGNPEVDLALIRAILEPE--MDLDI-----YLTTPEIGADQLAQEAI-----ERGAELIIASGGDGT 69 (300)
T ss_pred CceEEEEECCCCCCCchhhhHHHHHHHHHhc--CceEE-----EEccCCCCHHHHHHHHH-----hcCCCEEEEECChHH
Confidence 4689999999999988878888898888763 34333 23556788999987753 245689999999999
Q ss_pred HHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEEecCCCCc
Q 011722 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEV 239 (479)
Q Consensus 160 v~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~~~~~~~~~ 239 (479)
||+|+|+|.. .++|||+||+||||||||+||+ |.++.+|++. +.+|.++++|++++
T Consensus 70 l~evv~~l~~-------~~~~lgviP~GTgNdfAr~lgi----~~~~~~a~~~----i~~g~~~~iDlg~v--------- 125 (300)
T PRK00861 70 LSAVAGALIG-------TDIPLGIIPRGTANAFAAALGI----PDTIEEACRT----ILQGKTRRVDVAYC--------- 125 (300)
T ss_pred HHHHHHHHhc-------CCCcEEEEcCCchhHHHHHcCC----CCCHHHHHHH----HHcCCcEEeeEEEE---------
Confidence 9999999975 4689999999999999999999 5666666554 66899999999865
Q ss_pred CCCCCCCCCCccccccccccccCCCCCcccceeceEeeEEeeehhHHHhhHhhhhcccCCCccccCCCcceeeecccccc
Q 011722 240 VDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQ 319 (479)
Q Consensus 240 ~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~rl~nkl~Y~~~~~~~ 319 (479)
++++|+|.+|+||||+|++.+++.+ |. ++ |+++|+..+++.
T Consensus 126 -------------------------------n~~~fin~a~~G~~a~v~~~~~~~~--k~-----~~-G~~aY~~~~l~~ 166 (300)
T PRK00861 126 -------------------------------NGQPMILLAGIGFEAETVEEADREA--KN-----RF-GILAYILSGLQQ 166 (300)
T ss_pred -------------------------------CCEEEEEEEeccHHHHHHHHhhHHH--Hh-----cc-cHHHHHHHHHHH
Confidence 2479999999999999999887543 21 23 789999888765
Q ss_pred cccccccCCCCcccccccceeeeEeeeecCCceEEeeCCcceEEEEeccCCCCcCCCCCCCCCchhhhccCCccccCCCC
Q 011722 320 GWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDG 399 (479)
Q Consensus 320 ~~f~~~~~~~~~~~~l~~~~~~~i~~v~~~~~e~~~~~~~~~~ivv~N~~~~ggG~~~wg~~~p~~~~~~~~~~a~~dDG 399 (479)
++-. +.++++++ ++ ++.++ .+..+++++|++++++.+. .| +|+++++||
T Consensus 167 l~~~-------------~~~~~~i~-~d---g~~~~--~~~~~i~v~N~~~~~~~~~-~g-----------~p~a~~~DG 215 (300)
T PRK00861 167 LREL-------------ESFEVEIE-TE---DQIIT--TNAVAVTVANAAPPTSVLA-QG-----------PGAVIPDDG 215 (300)
T ss_pred hccC-------------CCeeEEEE-EC---CeEEE--EEEEEEEEECCCCcccccc-cC-----------CCCCCCCCc
Confidence 4211 12344443 32 34433 3577899999986643221 11 157899999
Q ss_pred eeEEEEEccchhHHH------HHHhhccceE-------EeeeeEEEEEecCCccccceEEecCCccCCCCCCCCceEEEE
Q 011722 400 LLEIFGLKQGWHASF------VMVELISAKH-------IAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEI 466 (479)
Q Consensus 400 lLeVv~~~~~~~~~~------l~~~l~~g~~-------l~q~~~i~I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~v~i 466 (479)
+|||++++....+.+ ++..+..|+| ..++++++|+++ +++++|+|||+... ++++|
T Consensus 216 ~ldv~iv~~~~~~~~l~~~~~l~~~~~~g~~~~~~~v~~~~~~~i~I~~~----~~~~~~~DGE~~~~-------~p~~i 284 (300)
T PRK00861 216 LLDVTIVAPKNLAEAVAASYHLLQTALQGNPAERDDIGYLRAKQVKITTD----PPQKVVIDGEVVGT-------TPIEI 284 (300)
T ss_pred eEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCCCCceEEEEccEEEEEeC----CCeEEEECCccCCC-------ceEEE
Confidence 999999988544332 2333344543 468999999986 67899999999863 46999
Q ss_pred Eeecccccccc
Q 011722 467 KRVPFQSLMIS 477 (479)
Q Consensus 467 ~~~p~~~~~~~ 477 (479)
+.+|....++.
T Consensus 285 ~v~p~al~v~~ 295 (300)
T PRK00861 285 ECLPRSLKVFA 295 (300)
T ss_pred EEECCEEEEEe
Confidence 99999887764
No 10
>PRK13055 putative lipid kinase; Reviewed
Probab=100.00 E-value=1.1e-41 Score=348.24 Aligned_cols=287 Identities=17% Similarity=0.176 Sum_probs=213.2
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchh
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGT 159 (479)
+++++||+||+||++++.+.+.+++.+|.... +++.+..+ |...++++++++++. ..+.+.|||+|||||
T Consensus 2 ~~r~~iI~NP~sG~~~~~~~~~~i~~~l~~~g-~~~~i~~t----~~~~~~a~~~~~~~~-----~~~~d~vvv~GGDGT 71 (334)
T PRK13055 2 QKRARLIYNPTSGQEIMKKNVADILDILEQAG-YETSAFQT----TPEPNSAKNEAKRAA-----EAGFDLIIAAGGDGT 71 (334)
T ss_pred CceEEEEECCCCCchhHHHHHHHHHHHHHHcC-CeEEEEEe----ecCCccHHHHHHHHh-----hcCCCEEEEECCCCH
Confidence 47899999999999988888999999987653 45443221 224468888887653 245689999999999
Q ss_pred HHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCC-cHHHHHHHHHHHHHcCCceeeeeeEEEEecCCCC
Q 011722 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPF-AWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGE 238 (479)
Q Consensus 160 v~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~-~~~~al~~~l~~i~~g~~~~iD~~~i~~~~~~~~ 238 (479)
||+|+|+|... ...+||||||+||||||||+||+ |. ++.++++. +..|+++++|++.+.
T Consensus 72 l~evvngl~~~-----~~~~~LgiiP~GTgNdfAr~Lgi----~~~~~~~a~~~----l~~g~~~~vD~g~v~------- 131 (334)
T PRK13055 72 INEVVNGIAPL-----EKRPKMAIIPAGTTNDYARALKI----PRDNPVEAAKV----ILKNQTIKMDIGRAN------- 131 (334)
T ss_pred HHHHHHHHhhc-----CCCCcEEEECCCchhHHHHHcCC----CCcCHHHHHHH----HHcCCcEEeeEEEEC-------
Confidence 99999999863 35689999999999999999999 55 56666554 568999999998651
Q ss_pred cCCCCCCCCCCccccccccccccCCCCCcccceeceEeeEEeeehhHHHhhHhhhhcccCCCccccCCCcceeeeccccc
Q 011722 239 VVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCT 318 (479)
Q Consensus 239 ~~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~rl~nkl~Y~~~~~~ 318 (479)
++++|+|++|+||||+|++..+..++ + ++ |+++|+..+++
T Consensus 132 --------------------------------~~~~F~n~ag~G~da~v~~~~~~~~k-~------~~-G~laY~~~~~~ 171 (334)
T PRK13055 132 --------------------------------EDKYFINIAAGGSLTELTYSVPSQLK-S------MF-GYLAYLAKGAE 171 (334)
T ss_pred --------------------------------CCcEEEEEehhccchHHHHhcCHHHH-h------hc-cHHHHHHHHHH
Confidence 14899999999999999988775431 1 33 88999887765
Q ss_pred ccccccccCCCCcccccccceeeeEeeeecCCceEEeeCCcceEEEEeccCCCCcCCCCCCCCCchhhhccCCccccCCC
Q 011722 319 QGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADD 398 (479)
Q Consensus 319 ~~~f~~~~~~~~~~~~l~~~~~~~i~~v~~~~~e~~~~~~~~~~ivv~N~~~~ggG~~~wg~~~p~~~~~~~~~~a~~dD 398 (479)
.++.. +..+++++ ++ + +... .+..+++++|+++||||+.+ + |+++++|
T Consensus 172 ~l~~~-------------~~~~~~i~-~d--~-~~~~--~~~~~~~v~n~~~~Gg~~~~----~---------p~a~~~D 219 (334)
T PRK13055 172 LLPRV-------------SPVPVRIT-YD--E-GVFE--GKISMFFLALTNSVGGFEQI----V---------PDAKLDD 219 (334)
T ss_pred HHHhc-------------CCeeEEEE-EC--C-EEEE--EEEEEEEEEcCcccCCcccc----C---------CCCcCCC
Confidence 53211 12344443 32 2 3332 35778899999999998875 3 6899999
Q ss_pred CeeEEEEEccchh--HHHHHHhhcc-ce-------EEeeeeEEEEEecCCccccceEEecCCccCCCCCCCCceEEEEEe
Q 011722 399 GLLEIFGLKQGWH--ASFVMVELIS-AK-------HIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKR 468 (479)
Q Consensus 399 GlLeVv~~~~~~~--~~~l~~~l~~-g~-------~l~q~~~i~I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~v~i~~ 468 (479)
|+|||+++++... +..++..+.. |+ +..++++++|++.. .+++++|+|||+... ++++|+.
T Consensus 220 G~ldv~i~~~~~~~~~l~~~~~~~~~G~~~~~~~v~~~~~~~i~I~~~~--~~~~~~~iDGE~~~~-------~pv~i~v 290 (334)
T PRK13055 220 GKFTLIIVKTANLFELLHLMALILNGGKHIDDPRVIYIKTSKLTIEPLG--DDRLMVNLDGEYGGD-------APMTFEN 290 (334)
T ss_pred ceEEEEEEcCCCHHHHHHHHHHHHhCCCCCCCCcEEEEEccEEEEEeCC--CCcceEeeCCCcCCC-------CcEEEEE
Confidence 9999999988433 3334444444 43 34578999998752 146899999999863 3599999
Q ss_pred ecccccccc
Q 011722 469 VPFQSLMIS 477 (479)
Q Consensus 469 ~p~~~~~~~ 477 (479)
+|....++.
T Consensus 291 ~p~al~v~~ 299 (334)
T PRK13055 291 LKQHIEFFA 299 (334)
T ss_pred EcCeEEEEe
Confidence 999888775
No 11
>PRK13054 lipid kinase; Reviewed
Probab=100.00 E-value=9.1e-41 Score=336.71 Aligned_cols=283 Identities=20% Similarity=0.205 Sum_probs=206.4
Q ss_pred CCCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 79 ~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
+++++++|+||++++ .+.+.++...|.+.. +++.+ +.|+..+|+.++++++. ..+.+.||++||||
T Consensus 2 ~~~~~~~i~N~~~~~---~~~~~~~~~~l~~~g-~~~~v-----~~t~~~~~a~~~a~~~~-----~~~~d~vvv~GGDG 67 (300)
T PRK13054 2 TFPKSLLILNGKSAG---NEELREAVGLLREEG-HTLHV-----RVTWEKGDAARYVEEAL-----ALGVATVIAGGGDG 67 (300)
T ss_pred CCceEEEEECCCccc---hHHHHHHHHHHHHcC-CEEEE-----EEecCCCcHHHHHHHHH-----HcCCCEEEEECCcc
Confidence 578999999999863 245555666676543 45443 23556788999987753 24578999999999
Q ss_pred hHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEEecCCCC
Q 011722 159 TVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGE 238 (479)
Q Consensus 159 Tv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~~~~~~~~ 238 (479)
|||+|+|+|.+.. ...++||||||+||||||||+||+ |.++.++++ .+..|++++||++++
T Consensus 68 Tl~evv~~l~~~~---~~~~~~lgiiP~GTgNdfar~lgi----~~~~~~a~~----~i~~g~~~~iDlg~v-------- 128 (300)
T PRK13054 68 TINEVATALAQLE---GDARPALGILPLGTANDFATAAGI----PLEPDKALK----LAIEGRAQPIDLARV-------- 128 (300)
T ss_pred HHHHHHHHHHhhc---cCCCCcEEEEeCCcHhHHHHhcCC----CCCHHHHHH----HHHhCCceEEEEEEE--------
Confidence 9999999998631 124689999999999999999999 666666655 456899999999865
Q ss_pred cCCCCCCCCCCccccccccccccCCCCCcccceec-eEeeEEeeehhHHHhhHhhhhcccCCCccccCCCcceeeecccc
Q 011722 239 VVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEG-VFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSC 317 (479)
Q Consensus 239 ~~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~rl~nkl~Y~~~~~ 317 (479)
+++ +|+|.+|+||||+|+++.++.. | .++ |+++|+..++
T Consensus 129 --------------------------------~~~~~f~n~~~~G~~a~v~~~~~~~~--k-----~~~-G~~~Y~~~~l 168 (300)
T PRK13054 129 --------------------------------NDRTYFINMATGGFGTRVTTETPEKL--K-----AAL-GGVAYLIHGL 168 (300)
T ss_pred --------------------------------cCceEEEEEeecchhHHHHHhhHHHH--H-----hcc-chHHHHHHHH
Confidence 124 9999999999999999886532 1 123 8899988877
Q ss_pred cccccccccCCCCcccccccceeeeEeeeecCCceEEeeCCcceEEEEeccCCCCcCCCCCCCCCchhhhccCCccccCC
Q 011722 318 TQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHAD 397 (479)
Q Consensus 318 ~~~~f~~~~~~~~~~~~l~~~~~~~i~~v~~~~~e~~~~~~~~~~ivv~N~~~~ggG~~~wg~~~p~~~~~~~~~~a~~d 397 (479)
+.++- . +.++++++ .+ ++..+ .++.+++|+|+++||||+.+ + |+++++
T Consensus 169 ~~l~~------------~-~~~~~~i~---~d-~~~~~--~~~~~~~v~N~~~~ggg~~~----~---------p~a~~~ 216 (300)
T PRK13054 169 MRMDT------------L-KPDRCEIR---GP-DFHWQ--GDALVIGIGNGRQAGGGQQL----C---------PEALIN 216 (300)
T ss_pred HHHhh------------C-CCeEEEEE---eC-CcEEE--eeEEEEEEECCCcCCCCccc----C---------CCCcCC
Confidence 65321 1 12344433 22 23332 46889999999999999875 3 689999
Q ss_pred CCeeEEEEEccchhHHHHHHhhccc-------eEEeeeeEEEEEecCCccccceEEecCCccCCCCCCCCceEEEEEeec
Q 011722 398 DGLLEIFGLKQGWHASFVMVELISA-------KHIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVP 470 (479)
Q Consensus 398 DGlLeVv~~~~~~~~~~l~~~l~~g-------~~l~q~~~i~I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~v~i~~~p 470 (479)
||+|||+++++.+.+...+..+..| .+..++++++|++. +++++|+|||++.. ++++|+.+|
T Consensus 217 DG~ldv~~~~~~~~~l~~l~~~~~g~~~~~~~v~~~~~~~v~i~~~----~~~~~~iDGE~~~~-------~p~~i~v~p 285 (300)
T PRK13054 217 DGLLDLRILPAPQELLPTLLSTLTGGSEDNPNIIRARLPWLEIQAP----HELTFNLDGEPLSG-------RHFRIEVLP 285 (300)
T ss_pred CCeEEEEEECCHHHHHHHHHHHHhCCCCCCCcEEEEECCEEEEEcC----CCCEEEeCCCcCCC-------ccEEEEEEc
Confidence 9999999998822222222222222 34568899999875 67999999999864 359999999
Q ss_pred ccccccc
Q 011722 471 FQSLMIS 477 (479)
Q Consensus 471 ~~~~~~~ 477 (479)
....++.
T Consensus 286 ~al~vl~ 292 (300)
T PRK13054 286 AALRCRL 292 (300)
T ss_pred CeeEEEe
Confidence 9887764
No 12
>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism]
Probab=100.00 E-value=2.4e-43 Score=371.76 Aligned_cols=398 Identities=28% Similarity=0.443 Sum_probs=284.6
Q ss_pred cccccchhee---hhhhcCCcc-eeecccccccccccccchhhhhhhhhhhcCCCCCCCCCCCCccccCCCCCCCCCcEE
Q 011722 9 RIAARSSMID---SIRGCGLSG-MRIDKEDLRRKLSIPEYLRVAMSNAIRRKEGEPPADTCQSDVIVDGNGVQPPEAPMV 84 (479)
Q Consensus 9 ~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 84 (479)
+..---|+|+ .|..|-.+. -+|.+|.-+.-...|..|-....+... -..+ ...+.+-.+|++
T Consensus 133 rlqd~rclwc~~~vh~~c~~~~~~~cs~~~~~~svi~ptal~~~~~dg~~----------v~~~----~a~~~~~~spll 198 (1099)
T KOG1170|consen 133 RLQDYRCLWCGCCVHDTCIGNLARACSLGHSALSVIPPTALKEVTPDGTA----------VFWE----EAYGGPCGSPLL 198 (1099)
T ss_pred ccCCcceEeeccEeehhhhhhHHhhcccccccccccChhhhcccCCCcce----------eehh----hhcCCCCCCcee
Confidence 3333446674 566776666 688888888888888777665544321 0001 123336789999
Q ss_pred EEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhHHHHH
Q 011722 85 VFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVL 164 (479)
Q Consensus 85 vivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv~~Vl 164 (479)
||+|.+||..+|.+..+++..+|++.||||+....|+- ++..+.. -+..+|+||||||+|+||+
T Consensus 199 v~insksgd~qg~~~lrkfkq~lnp~qVfdll~~gp~~----gL~~f~~------------~d~friLvcggdGsv~wvl 262 (1099)
T KOG1170|consen 199 VFINSKSGDSQGQRFLRKFKQILNPIQVFDLIAGGPDF----GLTFFSH------------FESFRILVCGGDGSVGWVL 262 (1099)
T ss_pred EeecccCCCchhHHHHHhhhhhcCHHHHHHHHccCcch----hhhhhhc------------ccceEEEEecCCCCCcchH
Confidence 99999999999999999999999999999998877753 3222211 2456999999999999999
Q ss_pred HHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEEecCC--------
Q 011722 165 GSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPS-------- 236 (479)
Q Consensus 165 ~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~~~~~~-------- 236 (479)
..++.++. ..+..++++|+|||||+||.||||..|+.+. -+.++++....+.++++|.|.+......
T Consensus 263 s~~ds~~l---h~kcql~vlplgtgndlarvlgwg~a~~ddt--~~p~il~~~eRastkmldrwsvm~~e~~~~~~~~~~ 337 (1099)
T KOG1170|consen 263 SAIDRLNL---HSKCQLAVLPLGTGNDLARVLGWGHAFYDDT--LLPQILRTMERASTKMLDRWSVMAIEGPQADAVRRY 337 (1099)
T ss_pred HHHHhccc---hhhcccccccCCChHHHHHHhcccccCchhh--ccHHHHHHHHhhhhhhhhcchhhhhhccccchHHHH
Confidence 99988653 6788999999999999999999998877654 3447888888899999999987532100
Q ss_pred ----------CCc-------CCCCCC----CCCC-cccccc---------------------------------------
Q 011722 237 ----------GEV-------VDPPHS----LKPT-EDCALD--------------------------------------- 255 (479)
Q Consensus 237 ----------~~~-------~~~p~~----~~~~-~~~~~~--------------------------------------- 255 (479)
++. ...|.. |++. +++.+.
T Consensus 338 ~~~v~~~~~~~e~~~i~~~e~q~~t~l~kiL~s~~~t~~i~~~~~~c~~~~~f~~k~~ka~~s~~~nl~~s~a~~~k~sp 417 (1099)
T KOG1170|consen 338 IEKVETFLEAEETWDIIHAENQLATTLRKILHSVSHTYSILENNTLCTKREDFVKKRSKATPSVLSNLSSSSACSPKCSP 417 (1099)
T ss_pred HHHHHHhcccchhhhhhhhhhhhhhhHHhhhccccchhhhhhhccccchHHHHHHHHhhcccchhccCCchhhccccCCc
Confidence 000 000000 0000 000000
Q ss_pred ----------------------------------cccc------------------------------------------
Q 011722 256 ----------------------------------QGLQ------------------------------------------ 259 (479)
Q Consensus 256 ----------------------------------~g~~------------------------------------------ 259 (479)
.|..
T Consensus 418 a~e~~~~~~~~~~~es~assv~~~~t~~~~~~l~~gt~~~~~~g~t~~p~~~~~~~~~~~i~~~r~eL~~kans~kks~s 497 (1099)
T KOG1170|consen 418 AGEDLPQLFEILHSESSASSVLTALSARTYDELEIGTVHPPTPGATREPSTAYDDDEENEIVENRKELDQKANSLKKSVS 497 (1099)
T ss_pred cccchhHHHHHhhhhhhhhhccCCCchhhhhhhhhccccCCCCCccCCCCccccchhhhhhcccHHHHhHHhhhhhccHH
Confidence 0000
Q ss_pred --------------------------------------------------------------------------------
Q 011722 260 -------------------------------------------------------------------------------- 259 (479)
Q Consensus 260 -------------------------------------------------------------------------------- 259 (479)
T Consensus 498 ~~i~~te~a~De~~~~~~~~L~eseekm~~ks~~~~~~se~d~~~~~~s~~~~~~spl~rl~s~~~ls~ggs~~s~~~~~ 577 (1099)
T KOG1170|consen 498 TIIDITEGAPDEPRIYSDTTLNESEEKMKSKSLHPICSSEDDMKQHSDSSLYADYSPLERLSSGGGLSAGGSTLSPARAS 577 (1099)
T ss_pred HhHHHhhcCCCcccccchhhhhhhHhhhhhccCCCcccCccccccccchhhccccchhhccCCCCCcccCccccCccccc
Confidence
Q ss_pred --------------c-------cCCCC----CcccceeceEeeEEeeehhHHHhhHhhhhcccCCCccccCCCcceeeec
Q 011722 260 --------------I-------EGALP----EKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSG 314 (479)
Q Consensus 260 --------------~-------~~~~~----~~~~~~~~~F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~rl~nkl~Y~~ 314 (479)
- +..++ +..+ =+|+||||||+||.|...||..|+++|+++++|.+|.+||..
T Consensus 578 d~dtl~al~~~~~~p~~d~g~seS~L~sa~~y~Ek---CVMNNYFGIGlDAKISLDFhnKReEhPeKcrSR~kn~MWYGv 654 (1099)
T KOG1170|consen 578 DSDTLSALKERKRTPGSDLGLSESHLRSAGQYKEK---CVMNNYFGIGLDAKISLDFHNKREEHPEKCRSRSKNFMWYGV 654 (1099)
T ss_pred ccchhhhhhccccCCcccccccccccccccchhhh---hhhccccccccceeEeeecccccccChHHHhHHhhhcchhhh
Confidence 0 00011 1112 279999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCCCcccccccceeeeEeeeecCCceEEeeCCcceEEEEeccCCCCcCCCCCCCCCchhhhccCCccc
Q 011722 315 YSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEA 394 (479)
Q Consensus 315 ~~~~~~~f~~~~~~~~~~~~l~~~~~~~i~~v~~~~~e~~~~~~~~~~ivv~N~~~~ggG~~~wg~~~p~~~~~~~~~~a 394 (479)
.|.++++ ..+|. +|. -++. ++|+ |+.+++| ++..|||+|+|+|.||.|+||..+. +--|..+
T Consensus 655 LGtKeLL-hrTyr------nLE----QRV~-LECD-G~~i~lP-~LQGIviLNIpSyaGGtNFWGsnk~----dd~f~ap 716 (1099)
T KOG1170|consen 655 LGTKELL-HRTYR------NLE----QRVK-LECD-GVPIDLP-SLQGIVILNIPSYAGGTNFWGSNKD----DDEFTAP 716 (1099)
T ss_pred cchHHHH-HHHHH------hHH----HHee-eecC-CcccCCc-ccceeEEEecccccCcccccCCCCC----CCcccCC
Confidence 9999873 33332 232 2333 6775 6889887 6999999999999999999997552 2346788
Q ss_pred cCCCCeeEEEEEccchhHHH-HHHhhccceEEeeeeEEEEEecCCccccceEEecCCccCCCCCCCCceEEEEEeec
Q 011722 395 HADDGLLEIFGLKQGWHASF-VMVELISAKHIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVP 470 (479)
Q Consensus 395 ~~dDGlLeVv~~~~~~~~~~-l~~~l~~g~~l~q~~~i~I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~v~i~~~p 470 (479)
..||+.||||.+=...+|.. -+..| ..-||+||++|+|.+-+. +.+|+|+|||+|.|||. .+.|-+..
T Consensus 717 SfDDriLEVVAvFGsvqMA~SRvI~L-qhHRIAQCr~V~I~IlGD--E~IPVQvDGEaWlQPPG-----~irIvHKN 785 (1099)
T KOG1170|consen 717 SFDDRILEVVAVFGSVQMATSRVIRL-QHHRIAQCRHVRIVILGD--EGIPVQVDGEAWLQPPG-----IIRIVHKN 785 (1099)
T ss_pred CcccceeEEeeeehhHHHHHHHHHHh-hhhhhhhceEEEEEEecC--CCCceeecCccccCCCc-----eeeeehhh
Confidence 99999999998876555542 11223 345689999999999864 88999999999999985 45555443
No 13
>COG1597 LCB5 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]
Probab=100.00 E-value=2.6e-40 Score=332.76 Aligned_cols=284 Identities=23% Similarity=0.322 Sum_probs=219.4
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchh
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGT 159 (479)
++++.+|+||.||++++.+.++++++.|..+ .+++.... |...+|+.++++++. ..+.|.||++|||||
T Consensus 2 ~~~~~~i~Np~sG~~~~~~~~~~~~~~l~~~-g~~~~~~~-----t~~~g~a~~~a~~a~-----~~~~D~via~GGDGT 70 (301)
T COG1597 2 MKKALLIYNPTSGKGKAKKLLREVEELLEEA-GHELSVRV-----TEEAGDAIEIAREAA-----VEGYDTVIAAGGDGT 70 (301)
T ss_pred CceEEEEEcccccccchhhHHHHHHHHHHhc-CCeEEEEE-----eecCccHHHHHHHHH-----hcCCCEEEEecCcch
Confidence 6789999999999999999999999999876 46666533 334489999998875 357899999999999
Q ss_pred HHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEEecCCCCc
Q 011722 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEV 239 (479)
Q Consensus 160 v~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~~~~~~~~~ 239 (479)
||||+|+|.+. ..+||||||+||+|||||+||| |.+ .+..+++.+.+|+++.+|++++
T Consensus 71 v~evingl~~~------~~~~LgilP~GT~NdfAr~Lgi----p~~---~~~~Al~~i~~g~~~~vDlg~~--------- 128 (301)
T COG1597 71 VNEVANGLAGT------DDPPLGILPGGTANDFARALGI----PLD---DIEAALELIKSGETRKVDLGQV--------- 128 (301)
T ss_pred HHHHHHHHhcC------CCCceEEecCCchHHHHHHcCC----Cch---hHHHHHHHHHcCCeEEEeehhc---------
Confidence 99999999974 2233999999999999999999 653 1334455678999999999632
Q ss_pred CCCCCCCCCCccccccccccccCCCCCcccceec-eEeeEEeeehhHHHhhHhhhhcccCCCccccCCCcceeeeccccc
Q 011722 240 VDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEG-VFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCT 318 (479)
Q Consensus 240 ~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~rl~nkl~Y~~~~~~ 318 (479)
+++ ||+|.+++|++|+++++++..|++ ++ |.++|+..++.
T Consensus 129 -------------------------------~~~~~fin~a~~G~~a~~~~~~~~~~k~-------~~-g~~~y~~~~~~ 169 (301)
T COG1597 129 -------------------------------NGRRYFINNAGIGFDAEVVAAVEEERKK-------GF-GRLAYALAGLA 169 (301)
T ss_pred -------------------------------CCcceEEEEeecchhHHHHHhhcHHHHh-------cc-chHHHHHHHHH
Confidence 134 999999999999999999987643 22 78899988776
Q ss_pred ccccccccCCCCcccccccceeeeEeeeecCCceEEeeCCcceEEEEeccCCCCcCCCCCCCCCchhhhccCCccccCCC
Q 011722 319 QGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADD 398 (479)
Q Consensus 319 ~~~f~~~~~~~~~~~~l~~~~~~~i~~v~~~~~e~~~~~~~~~~ivv~N~~~~ggG~~~wg~~~p~~~~~~~~~~a~~dD 398 (479)
.+... +.+.++++ ++. +..+ .....+++.|++++||+..+ + |++.++|
T Consensus 170 ~l~~~-------------~~~~~~i~-~d~---~~~~--~~~~~~~~~~~~~~gg~~~~----~---------p~a~~~d 217 (301)
T COG1597 170 VLARL-------------KPFRIEIE-YDG---KTFE--GEALALLVFNGNSYGGGMKL----A---------PDASLDD 217 (301)
T ss_pred hcccc-------------CCCcEEEE-EcC---cEEE--EEEEEEEEecCccccccccc----C---------CcCCCCC
Confidence 54222 23344444 333 2222 34678888899999998875 4 6899999
Q ss_pred CeeEEEEEccc--hhHHHHHHhhccceE-------EeeeeEEEEEecCCccccceEEecCCccCCCCCCCCceEEEEEee
Q 011722 399 GLLEIFGLKQG--WHASFVMVELISAKH-------IAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRV 469 (479)
Q Consensus 399 GlLeVv~~~~~--~~~~~l~~~l~~g~~-------l~q~~~i~I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~v~i~~~ 469 (479)
|+|++++++.. +.+..++..+..|+| ..+++.++|++. .++++++|||+.... +++|+.+
T Consensus 218 G~l~~~i~~~~~~~~~~~l~~~~~~G~~~~~~~v~~~~~~~~~i~~~----~~~~~~~DGE~~~~~-------p~~i~~~ 286 (301)
T COG1597 218 GLLDVYILKPQSLLELLALLPDLLRGKHLENPDVEYLRAKKLEITSD----PPIPVNLDGEYLGKT-------PVTIEVL 286 (301)
T ss_pred ceEEEEEEccccHHHHHHHHHHHhCCCccCCCCeEEEeccEEEEEcC----CCceEeeCCccCCCC-------cEEEEEe
Confidence 99999999984 334456666666644 357888999886 689999999998753 3999999
Q ss_pred ccccccccC
Q 011722 470 PFQSLMISG 478 (479)
Q Consensus 470 p~~~~~~~~ 478 (479)
|.+.-++..
T Consensus 287 p~al~vl~p 295 (301)
T COG1597 287 PGALRVLVP 295 (301)
T ss_pred cccEEEEcC
Confidence 998877643
No 14
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family. The E. coli member of this family, YegS has been purified and shown to have phosphatidylglycerol kinase activity. The member from M. tuberculosis, Rv2252, has diacylglycerol kinase activity. BmrU from B. subtilis is in an operon with multidrug efflux transporter Bmr, but is uncharacterized.
Probab=100.00 E-value=4.7e-40 Score=330.18 Aligned_cols=282 Identities=20% Similarity=0.235 Sum_probs=207.0
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchh
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGT 159 (479)
++++++|+||.||++.+.+.++++++.|.... +++... .|+..+++..+++++. ..+.+.||++|||||
T Consensus 1 ~~~~~ii~Np~sg~~~~~~~~~~i~~~l~~~~-~~~~~~-----~t~~~~~~~~~~~~~~-----~~~~d~ivv~GGDGT 69 (293)
T TIGR00147 1 MAEAPAILNPTAGKSNDNKPLREVIMLLREEG-MEIHVR-----VTWEKGDAARYVEEAR-----KFGVDTVIAGGGDGT 69 (293)
T ss_pred CceEEEEECCCccchhhHHHHHHHHHHHHHCC-CEEEEE-----EecCcccHHHHHHHHH-----hcCCCEEEEECCCCh
Confidence 46899999999999888888899998887654 443331 1334445565554321 135789999999999
Q ss_pred HHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEEecCCCCc
Q 011722 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEV 239 (479)
Q Consensus 160 v~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~~~~~~~~~ 239 (479)
+++|+++|... ...+|||+||+||+|||||+||+ |.++.++++ .+.+++.+++|++++
T Consensus 70 l~~v~~~l~~~-----~~~~~lgiiP~Gt~N~~a~~l~i----~~~~~~~~~----~l~~~~~~~~Dlg~v--------- 127 (293)
T TIGR00147 70 INEVVNALIQL-----DDIPALGILPLGTANDFARSLGI----PEDLDKAAK----LVIAGDARAIDMGQV--------- 127 (293)
T ss_pred HHHHHHHHhcC-----CCCCcEEEEcCcCHHHHHHHcCC----CCCHHHHHH----HHHcCCceEEEEEEE---------
Confidence 99999999753 24579999999999999999999 556655554 467899999999765
Q ss_pred CCCCCCCCCCccccccccccccCCCCCcccceece-EeeEEeeehhHHHhhHhhhhcccCCCccccCCCcceeeeccccc
Q 011722 240 VDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGV-FYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCT 318 (479)
Q Consensus 240 ~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~rl~nkl~Y~~~~~~ 318 (479)
++++ |+|++|+|+||++++.++... | .++ |+++|+..++.
T Consensus 128 -------------------------------~~~~~fln~~g~G~~a~v~~~~~~~~--k-----~~~-g~~~Y~~~~l~ 168 (293)
T TIGR00147 128 -------------------------------NKQYCFINMAGGGFGTEITTETPEKL--K-----AAL-GSLSYILSGLM 168 (293)
T ss_pred -------------------------------CCeEEEEEEEeechhhHhHhhCCHHH--H-----hcc-chHHHHHHHHH
Confidence 2478 999999999999999886532 1 234 88999987765
Q ss_pred ccccccccCCCCcccccccceeeeEeeeecCCceEEeeCCcceEEEEeccCCCCcCCCCCCCCCchhhhccCCccccCCC
Q 011722 319 QGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADD 398 (479)
Q Consensus 319 ~~~f~~~~~~~~~~~~l~~~~~~~i~~v~~~~~e~~~~~~~~~~ivv~N~~~~ggG~~~wg~~~p~~~~~~~~~~a~~dD 398 (479)
.++. . +.++++++ ++ ++.++ .+...++++|+++||||+.++ |+++++|
T Consensus 169 ~l~~------------~-~~~~~~i~-~d---~~~~~--~~~~~~~v~n~~~~gg~~~~~-------------p~a~~~D 216 (293)
T TIGR00147 169 RMDT------------L-QPFRCEIR-GE---GEHWQ--GEAVVFLVGNGRQAGGGQKLA-------------PDASIND 216 (293)
T ss_pred HHhh------------C-CCeeEEEE-EC---CeEEE--eeEEEEEEeCCcccCCCcccC-------------CccccCC
Confidence 5321 1 12334443 32 34443 346778889999999998763 6889999
Q ss_pred CeeEEEEEccchhH--HHHHHhhccce-------EEeeeeEEEEEecCCccccceEEecCCccCCCCCCCCceEEEEEee
Q 011722 399 GLLEIFGLKQGWHA--SFVMVELISAK-------HIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRV 469 (479)
Q Consensus 399 GlLeVv~~~~~~~~--~~l~~~l~~g~-------~l~q~~~i~I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~v~i~~~ 469 (479)
|+|||+++++.+.+ ..++..+..|+ +..++++++|+++ +++++|+|||++... +++|+.+
T Consensus 217 G~l~v~~v~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~i~~~----~~~~~~iDGE~~~~~-------p~~i~v~ 285 (293)
T TIGR00147 217 GLLDLRIFTNDNLLPALVLTLMSDEGKHTDNPNIIYGKASRIDIQTP----HKITFNLDGEPLGGT-------PFHIEIL 285 (293)
T ss_pred CeeEEEEEcCCCHHHHHHHHHHHhcCCCCCCCcEEEEEccEEEEEcC----CCcEEEeCCCcCCCC-------cEEEEEE
Confidence 99999999875433 33444444444 4568999999976 678999999998753 4999999
Q ss_pred ccccccc
Q 011722 470 PFQSLMI 476 (479)
Q Consensus 470 p~~~~~~ 476 (479)
|....++
T Consensus 286 p~al~~~ 292 (293)
T TIGR00147 286 PAHLRCR 292 (293)
T ss_pred hhccEEe
Confidence 9887654
No 15
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase
Probab=100.00 E-value=7.9e-39 Score=340.45 Aligned_cols=301 Identities=18% Similarity=0.171 Sum_probs=210.0
Q ss_pred CCCCcEEEEEcCCCCCCChhHHHH-HHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcC
Q 011722 78 PPEAPMVVFINSRSGGRHGPELKE-RLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG 156 (479)
Q Consensus 78 ~~~~~~lvivNP~SG~~~~~~~~~-~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GG 156 (479)
..+++++||+||.||++++.+.+. .++.+|.... +++.+ ..|++.+|+++++++++ ...++.|||+||
T Consensus 109 ~~~kr~lvIvNP~SGkg~a~k~~~~~v~~~L~~~g-i~~~v-----~~T~~~ghA~~la~~~~-----~~~~D~VV~vGG 177 (481)
T PLN02958 109 GRPKRLLVFVNPFGGKKSASKIFFDVVKPLLEDAD-IQLTI-----QETKYQLHAKEVVRTMD-----LSKYDGIVCVSG 177 (481)
T ss_pred cCCcEEEEEEcCCCCCcchhHHHHHHHHHHHHHcC-CeEEE-----EeccCccHHHHHHHHhh-----hcCCCEEEEEcC
Confidence 568899999999999999887764 6888887653 55544 33667899999998764 346789999999
Q ss_pred chhHHHHHHHHhhccccCCCCCCcEEeecCCCcccccccc----CCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEE
Q 011722 157 DGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSF----GWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVI 232 (479)
Q Consensus 157 DGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArsl----g~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~~ 232 (479)
|||||||+|+|..........++||||||+||||||||+| |+ |.++.+|+. .|..|..+++|++.+.-
T Consensus 178 DGTlnEVvNGL~~~~~~~~~~~~pLGiIPaGTgNdfArsL~~~~gi----p~~~~~A~~----~I~~g~~~~vDlg~v~~ 249 (481)
T PLN02958 178 DGILVEVVNGLLEREDWKTAIKLPIGMVPAGTGNGMAKSLLDSVGE----PCSATNAVL----AIIRGHKCSLDVATILQ 249 (481)
T ss_pred CCHHHHHHHHHhhCccccccccCceEEecCcCcchhhhhhccccCC----CcCHHHHHH----HHHcCCceEEeEEEEEc
Confidence 9999999999976421111346899999999999999999 77 666655554 46789999999987621
Q ss_pred ecCCCCcCCCCCCCCCCccccccccccccCCCCCcccceeceEeeEEeeehhHHHhhHhhhhcccCCCccccCCCcceee
Q 011722 233 QMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIY 312 (479)
Q Consensus 233 ~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~rl~nkl~Y 312 (479)
+ + ...+|+|++++||||+|....++. |+.|.++|
T Consensus 250 ------------------------~-----~-------~~~f~vn~~g~GfdAdV~~~se~k----------r~lG~lrY 283 (481)
T PLN02958 250 ------------------------G-----E-------TKFFSVLMLAWGLVADIDIESEKY----------RWMGSARL 283 (481)
T ss_pred ------------------------C-----C-------ceEEEEEeeeeehhhhhhcccccc----------cccchHHH
Confidence 0 0 013457999999999997653322 22388899
Q ss_pred ecccccccccccccCCCCcccccccceeeeEee-------------------------------------eecCCceEEe
Q 011722 313 SGYSCTQGWFLTPCISDPNLRGLKNILRMHVKK-------------------------------------VNCSEWEQVA 355 (479)
Q Consensus 313 ~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~i~~-------------------------------------v~~~~~e~~~ 355 (479)
..++++.++..... ..++.+.. ++..+|+.+
T Consensus 284 ~~~~l~~l~~~r~y-----------~~~I~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~- 351 (481)
T PLN02958 284 DFYGLQRILCLRQY-----------NGRISFVPAPGFEAYGEPTSYNGESTSKEESGKDKQHGYQGPDVKLENLDWRTI- 351 (481)
T ss_pred HHHHHHHHHhcCCc-----------ceEEEEEeccccccccccccccccccccccccccccccccCCccccCCccceEe-
Confidence 98887765322110 01111000 000123322
Q ss_pred eCCcceEEEEeccCCCCcCCCCCCCCCchhhhccCCccccCCCCeeEEEEEccchhHH--HHHHhhccceE-------Ee
Q 011722 356 VPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQGWHAS--FVMVELISAKH-------IA 426 (479)
Q Consensus 356 ~~~~~~~ivv~N~~~~ggG~~~wg~~~p~~~~~~~~~~a~~dDGlLeVv~~~~~~~~~--~l~~~l~~g~~-------l~ 426 (479)
.....+++++|.++||||+.+ + |.|+++||+|||+++++...+. .++..+..|+| ..
T Consensus 352 -~~~fl~v~v~N~~~~Ggg~~i----a---------P~A~l~DG~LDlviv~~~s~~~lL~~l~~~~~G~h~~~~~V~~~ 417 (481)
T PLN02958 352 -KGPFVSVWLHNVPWGGEDTLA----A---------PDAKFSDGYLDLILIKDCPKLALLALMTKLSDGTHVKSPYVMYL 417 (481)
T ss_pred -ecceeEEeeccCcccCCCccc----C---------CcccCCCCeEEEEEEcCCCHHHHHHHHHHHhCCCccCCCceEEE
Confidence 122344569999999999875 4 6999999999999999865543 34555656655 46
Q ss_pred eeeEEEEEecCC---ccccceEEecCCccCCCCCCCCceEEEEEeeccccccc
Q 011722 427 QAAAIRLEFRGG---EWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLMI 476 (479)
Q Consensus 427 q~~~i~I~~~~~---~~~~~~~qiDGE~~~~~~~~~~~~~v~i~~~p~~~~~~ 476 (479)
++++++|+.... ..++.++++|||.... ++++|+.+|....++
T Consensus 418 k~k~~~I~~~~~~~~~~~~~~i~iDGE~~~~-------~p~~i~v~~~al~~~ 463 (481)
T PLN02958 418 KVKAFVLEPGPRTDDPTKGGIIDSDGEVLAR-------GNGSYKCDQKALMSY 463 (481)
T ss_pred EEEEEEEEECCcccCcCcCCeEEECCcccCC-------CCceeeecccccccc
Confidence 899999987311 0145689999999864 348888888876654
No 16
>PLN02204 diacylglycerol kinase
Probab=100.00 E-value=3.6e-33 Score=297.04 Aligned_cols=319 Identities=14% Similarity=0.084 Sum_probs=208.9
Q ss_pred CCCCCCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEc
Q 011722 76 VQPPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAG 155 (479)
Q Consensus 76 ~~~~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~G 155 (479)
+..++++++|||||.||++++.+.++++..+|.... +++.+ ..|+..+|+.++++++.+. +...+|.|||+|
T Consensus 155 ~~~r~k~llVivNP~sGkg~~~~~~~~V~p~f~~a~-i~~~v-----~~T~~aghA~d~~~~~~~~--~l~~~D~VVaVG 226 (601)
T PLN02204 155 EVGRPKNLLVFVHPLSGKGSGSRTWETVSPIFIRAK-VKTKV-----IVTERAGHAFDVMASISNK--ELKSYDGVIAVG 226 (601)
T ss_pred ccCCCceEEEEECCCCCCcchHHHHHHHHHHHHHcC-CeEEE-----EEecCcchHHHHHHHHhhh--hccCCCEEEEEc
Confidence 456788999999999999999999999999997654 44433 3466789999988664321 135679999999
Q ss_pred CchhHHHHHHHHhhcccc--------------------------------------------------------------
Q 011722 156 GDGTVGWVLGSVGELNKQ-------------------------------------------------------------- 173 (479)
Q Consensus 156 GDGTv~~Vl~~l~~~~~~-------------------------------------------------------------- 173 (479)
||||+|||+|+|...+..
T Consensus 227 GDGt~nEVlNGL~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (601)
T PLN02204 227 GDGFFNEILNGYLLSRLKVPYPPSPSDSVHSVQSRGSSSVHEPNETVHECDNEDHSPLLSDSVQEVMNFRTENGSCEGDQ 306 (601)
T ss_pred CccHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999732100
Q ss_pred -----CCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEEecCCCCcCCCCCCCCC
Q 011722 174 -----GREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEVVDPPHSLKP 248 (479)
Q Consensus 174 -----~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~~~~~~~~~~~~p~~~~~ 248 (479)
.....++|||||+|||||||+++.. +.++..++. .|..|+.+.+|+++|.-...
T Consensus 307 ~~~~~~~~~~~~lGIIPaGSgN~~a~~~~g----~~dp~taa~----~Ii~G~~~~lDig~V~~~~~------------- 365 (601)
T PLN02204 307 DSDFPFPNERFRFGIIPAGSTDAIVMCTTG----ERDPVTSAL----HIILGRRVCLDIAQVVRWKT------------- 365 (601)
T ss_pred cccccccCCCceEEEECCccHHHHHHHccC----CCCHHHHHH----HHHhCCCeEeeEEEEecccc-------------
Confidence 0024578999999999999998865 556655544 46789999999998842100
Q ss_pred CccccccccccccCCCCCcccceeceEeeEEeeehhHHHhhHhhhhcccCCCccccCCCcceeeecccccccccccccCC
Q 011722 249 TEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCIS 328 (479)
Q Consensus 249 ~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~rl~nkl~Y~~~~~~~~~f~~~~~~ 328 (479)
...++ . ....+||+|.+|+||+|+|+++.++.| +.|.++|...+++.++..
T Consensus 366 --------~~~~~-~-----~~~~ryf~s~ag~Gf~gdVi~esek~R----------~mG~~rY~~~g~k~~~~~----- 416 (601)
T PLN02204 366 --------TSTSE-I-----EPYVRYAASFAGYGFYGDVISESEKYR----------WMGPKRYDYAGTKVFLKH----- 416 (601)
T ss_pred --------ccccc-c-----cccceEEEEEeecchHHHHHHHhhhhc----------ccchHHHHHHHHHHHHhC-----
Confidence 00000 0 012489999999999999998865433 238889999888764221
Q ss_pred CCcccccccceeeeEeeeecCCceEEe-----------eCCc---c---eEEEEeccCC---------------------
Q 011722 329 DPNLRGLKNILRMHVKKVNCSEWEQVA-----------VPKS---V---RAIVALNLHN--------------------- 370 (479)
Q Consensus 329 ~~~~~~l~~~~~~~i~~v~~~~~e~~~-----------~~~~---~---~~ivv~N~~~--------------------- 370 (479)
+..++++. ++ +.+... .+.+ + ..+.|+|.++
T Consensus 417 --------r~y~~~V~-~d--~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~c~Vcn~~~~~~~~~~~p~~~~~~~~W~~~ 485 (601)
T PLN02204 417 --------RSYEAEVA-YL--ETESEKSKASSEARKRTGPKKSEKIVCRTNCSVCNTKVSTNSPSTTPNSCPEETRWLRS 485 (601)
T ss_pred --------CCceEEEE-EC--CeEeeecccccccccccccccccchhhhhheeeecccccccccccccccccccccceee
Confidence 12233332 22 111100 0000 1 1366777551
Q ss_pred CCcCCCCCCCC-------CchhhhccCCccccCCCCeeEEEEEccchhHHH--HHHhhc-c-ce-------EEeeeeEEE
Q 011722 371 YASGRNPWGNL-------SPEYLEKKGFVEAHADDGLLEIFGLKQGWHASF--VMVELI-S-AK-------HIAQAAAIR 432 (479)
Q Consensus 371 ~ggG~~~wg~~-------~p~~~~~~~~~~a~~dDGlLeVv~~~~~~~~~~--l~~~l~-~-g~-------~l~q~~~i~ 432 (479)
+|+.+..++.. +|+ .-.|+|.++||.|||+++++..+..+ ++..+. . |. +..++++++
T Consensus 486 ~G~f~~vG~~iis~~~~rap~----gl~pdA~l~DG~LDLilVr~~s~~~~L~~L~~l~~~gG~~l~~~~Ve~~ktk~f~ 561 (601)
T PLN02204 486 KGRFLSVGAAIISNRNERAPD----GLVADAHLSDGFLHLILIKDCPHPLYLWHLTQLAKRGGEPLNFEFVEHHKTPAFT 561 (601)
T ss_pred cCceEEeeeeccccccccccc----ccCCCCcCCCCeEEEEEECCCCHHHHHHHHHHHHhhcCccCCCCcEEEEEeeEEE
Confidence 22221111100 111 11268999999999999998665443 333333 2 23 346899999
Q ss_pred EEecCCccccceEEecCCccCCCCCCCCceEEEEEeecccccccc
Q 011722 433 LEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLMIS 477 (479)
Q Consensus 433 I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~v~i~~~p~~~~~~~ 477 (479)
|+... +...+++|||.+.. +.|+|+..|....++.
T Consensus 562 ~~s~~---~~~~~niDGE~~~~-------~~v~v~V~~~al~lfa 596 (601)
T PLN02204 562 FTSFG---DESVWNLDGEIFQA-------HQLSAQVFRGLVNLFA 596 (601)
T ss_pred EEECC---CCceEEeCCCcCCC-------ccEEEEEEcCeeEEEe
Confidence 98752 45679999999864 3599999998776654
No 17
>PF00609 DAGK_acc: Diacylglycerol kinase accessory domain; InterPro: IPR000756 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. The DAG kinase domain is assumed to be an accessory domain. Upon cell stimulation, DAG kinase converts DAG into phosphatidate, initiating the resynthesis of phosphatidylinositols and attenuating protein kinase C activity. It catalyses the reaction: ATP + 1,2-diacylglycerol = ADP + 1,2-diacylglycerol 3-phosphate. The enzyme is stimulated by calcium and phosphatidylserine and phosphorylated by protein kinase C. This domain is always associated with IPR001206 from INTERPRO.; GO: 0004143 diacylglycerol kinase activity, 0007205 activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway
Probab=100.00 E-value=1.7e-33 Score=258.96 Aligned_cols=160 Identities=36% Similarity=0.633 Sum_probs=137.5
Q ss_pred eEeeEEeeehhHHHhhHhhhhcccCCCccccCCCcceeeecccccccccccccCCCCcccccccceeeeEeeeecCCceE
Q 011722 274 VFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQ 353 (479)
Q Consensus 274 ~F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~rl~nkl~Y~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~i~~v~~~~~e~ 353 (479)
+|+||||||+||+|+++||+.|+++|++|++|+.||++|+..|++++| ..+|.+ +.+.+++ .+ ||+.
T Consensus 1 v~~NYfsiG~DA~ia~~Fh~~R~~~P~~f~sr~~NK~~Y~~~g~k~~~-~~~~~~------~~~~i~l-----~~-dg~~ 67 (161)
T PF00609_consen 1 VMNNYFSIGVDAQIALGFHHSREKNPEKFNSRLLNKLWYAFFGFKALF-QRSCKN------LPKKIEL-----EV-DGKE 67 (161)
T ss_pred CeEecccccHhhHHHHHHhhccccChhhhccHHHHHHHHHHHHHHHHH-hchhcC------chhhccc-----cc-CCee
Confidence 489999999999999999999999999999999999999999999976 555532 2222332 22 3688
Q ss_pred EeeCCcceEEEEeccCCCCcCCCCCCCCCchhhhccCCccccCCCCeeEEEEEccchhHHHHHHhhccceEEeeeeEEEE
Q 011722 354 VAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQGWHASFVMVELISAKHIAQAAAIRL 433 (479)
Q Consensus 354 ~~~~~~~~~ivv~N~~~~ggG~~~wg~~~p~~~~~~~~~~a~~dDGlLeVv~~~~~~~~~~l~~~l~~g~~l~q~~~i~I 433 (479)
++++.++.+|+++|+++|+||.++|+..++.... +.|..++++||+|||+++++.+|+..++.++.+++||+|++.|+|
T Consensus 68 ~~lp~~~~~iv~lNIpSy~gG~~~W~~~~~~~~~-~~~~~~~~~Dg~lEVvg~~~~~hl~~~~~g~~~~~rl~Q~~~i~i 146 (161)
T PF00609_consen 68 VDLPSSLESIVFLNIPSYGGGVDLWGNSKPDRSK-LKFKKQSMDDGKLEVVGFRGSFHLGQIQAGLSSAKRLAQGRPIRI 146 (161)
T ss_pred EeeecceeEEEEEccccccCCcccccCCcccccc-cccccccccCceEEEEEEcCchhhhhhhhccCCceEeecCCEEEE
Confidence 8888789999999999999999999876543222 456789999999999999999999999999999999999999999
Q ss_pred EecCCccc-cceEEecCCc
Q 011722 434 EFRGGEWK-DAFMQMDGEP 451 (479)
Q Consensus 434 ~~~~~~~~-~~~~qiDGE~ 451 (479)
+++ + ++|||+||||
T Consensus 147 ~~~----~~~~~~QvDGEp 161 (161)
T PF00609_consen 147 ETK----ENKVPFQVDGEP 161 (161)
T ss_pred EEC----CCceeEEeCCCC
Confidence 998 5 8999999997
No 18
>KOG1116 consensus Sphingosine kinase, involved in sphingolipid metabolism [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.94 E-value=2.4e-26 Score=240.58 Aligned_cols=327 Identities=20% Similarity=0.214 Sum_probs=210.7
Q ss_pred CCCCCCCcEEEEEcCCCCCCChhHHHHH-HHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEE
Q 011722 75 GVQPPEAPMVVFINSRSGGRHGPELKER-LQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIV 152 (479)
Q Consensus 75 ~~~~~~~~~lvivNP~SG~~~~~~~~~~-l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vv 152 (479)
......++++|||||++|+|++.+++.+ ++.+|.+..+ |++ .+|++++||+++++..+ ...+|-||
T Consensus 174 ~~~~r~~~lLV~iNP~gGkGka~~~F~~~v~Pll~~A~i~~ev-------v~T~~~~HArei~rt~d-----l~kyDgIv 241 (579)
T KOG1116|consen 174 DSLKRPRRLLVFINPFGGKGKAKKLFKNHVEPLLSEAGISFEV-------VLTTRPNHAREIVRTLD-----LGKYDGIV 241 (579)
T ss_pred cccCCCccEEEEECCCCCCccHHHHHHhhhhhhhhhcCceEEE-------EEecCccHHHHHHHhhh-----ccccceEE
Confidence 3456789999999999999999887765 4557765542 444 35789999999998864 67899999
Q ss_pred EEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEE
Q 011722 153 VAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVI 232 (479)
Q Consensus 153 v~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~~ 232 (479)
++||||+++||+|||............|||+||+||||+||.++.|..++ + . ++...+ .+.+|....+|+..+.+
T Consensus 242 ~vsGDGl~hEVlNGLl~R~D~~~~~klPigiiP~GSGNala~Sv~~~~~~--~-~-~~~a~l-~iirg~~t~~dv~~v~~ 316 (579)
T KOG1116|consen 242 CVSGDGLLHEVLNGLLERPDWEAAVKLPIGIIPCGSGNALAKSVLWTNGP--D-L-PLLATL-LIIRGRLTPMDVSVVEY 316 (579)
T ss_pred EecCCcCHHHhhhccccccchhhHhcCceeEeecCCccHHHHHhhcccCc--c-c-chHHHH-HHHccCCCchheeehhh
Confidence 99999999999999987643333567899999999999999999997652 2 0 122222 36789999999977643
Q ss_pred ecCCCCcCCCCCCCCCCccccccccccccCCCCCcccceeceEeeEEeeehhHHHhhHhhhhcccCCCcc----------
Q 011722 233 QMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLA---------- 302 (479)
Q Consensus 233 ~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~sIG~DA~V~~~~~~~R~~kp~~~---------- 302 (479)
.. . ...++++..+.||.|+|-.+.++.|+.-+..|
T Consensus 317 ~~----------------------------~-------~~~fSfLs~~wGlIADiDI~SEk~R~mG~~Rf~lg~~~rl~~ 361 (579)
T KOG1116|consen 317 AG----------------------------K-------DRHFSFLSAAWGLIADVDIESEKYRWMGPARFTLGAFLRLIQ 361 (579)
T ss_pred cc----------------------------C-------cceEEEEeeeeeeEEecccchHHHHhhcchhhhHHHHHHHHh
Confidence 10 0 12678999999999999999988886543322
Q ss_pred ccCCCcceeeeccccccccc-c---------cccCC------------------CCccccccccee----------eeEe
Q 011722 303 QGPISNKLIYSGYSCTQGWF-L---------TPCIS------------------DPNLRGLKNILR----------MHVK 344 (479)
Q Consensus 303 ~~rl~nkl~Y~~~~~~~~~f-~---------~~~~~------------------~~~~~~l~~~~~----------~~i~ 344 (479)
...+++.+.|..+.-+..-- . ..|.. .|.........+ ....
T Consensus 362 lr~Y~gri~ylp~~~k~~~~~~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~~~~~~~s~~~e~s~~~~~~~~~~~p 441 (579)
T KOG1116|consen 362 LRKYKGRIEYLPAKGKSAEPLPAHELEAADSEGCLSTHADTEPSEYPRLSVPKMSPKSVLRSPVSETSPVIPEDPLHLSP 441 (579)
T ss_pred ccCCCceEEEecccccccCcccchhhccccccccccccccccccccccccccccCccccccCcccccCcccCCccccCCC
Confidence 11233555565533221000 0 00000 000000000000 0000
Q ss_pred ee---ecCCceEEeeCCcceEE-EEeccCCCCcCCCCCCCCCchhhhccCCccccCCCCeeEEEEEccc-hh--HHHHHH
Q 011722 345 KV---NCSEWEQVAVPKSVRAI-VALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQG-WH--ASFVMV 417 (479)
Q Consensus 345 ~v---~~~~~e~~~~~~~~~~i-vv~N~~~~ggG~~~wg~~~p~~~~~~~~~~a~~dDGlLeVv~~~~~-~~--~~~l~~ 417 (479)
++ ...+|+...-. +...+ .+.+. |.+..+.. +|.|.++||.+|++++... .+ +..++.
T Consensus 442 ~~~~p~psdw~~~~~~-d~~~~~a~~~s-y~~~d~~~-------------~P~A~~~dg~I~lv~~~~~~~r~~ll~~ll 506 (579)
T KOG1116|consen 442 PLEEPLPSDWEVVPGV-DFVCILAILLS-YLGADMKF-------------APAARPDDGLIHLVIVRAGGSRTQLLRLLL 506 (579)
T ss_pred cccCCCCcceeeecCc-ceeeeehhhhh-hccCCccc-------------ccccccCCCeEEEEEEccCCcHHHHHHHHH
Confidence 00 01235543211 22222 22332 55555442 4799999999999999874 22 334677
Q ss_pred hhccceEE---------eeeeEEEEEecCCccccceEEecCCccCCCCCCCCceEEEEEeeccccccccC
Q 011722 418 ELISAKHI---------AQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLMISG 478 (479)
Q Consensus 418 ~l~~g~~l---------~q~~~i~I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~v~i~~~p~~~~~~~~ 478 (479)
.+.+|.|+ ..+++++++... ...++++|||.+...| ++.+..|..-+++.|
T Consensus 507 ald~gsh~~~~~p~v~~~~vra~r~epv~---~~~~~~vDGE~~~~ep-------~q~~v~p~~i~~~s~ 566 (579)
T KOG1116|consen 507 ALDKGSHLHVECPFVKYVKVRAFRLEPVT---PSGYFAVDGELVPLEP-------LQVQVLPGLILTLSG 566 (579)
T ss_pred hhcccccccccCCceeEEEeEEEEEEEec---CCceEEecccEeeccc-------eeEEecccceeEEec
Confidence 77888884 357888888653 3489999999987543 777788887777665
No 19
>PF00781 DAGK_cat: Diacylglycerol kinase catalytic domain; InterPro: IPR001206 The DAG-kinase catalytic domain or DAGKc domain is present in mammalian lipid kinases, such as diacylglycerol (DAG), ceramide and sphingosine kinases, as well as in related bacterial proteins [, ]. Eukaryotic DAG-kinase (2.7.1.107 from EC) catalyses the phosphorylation of DAG to phosphatidic acid, thus modulating the balance between the two signaling lipids. At least ten different isoforms have been identified in mammals, which form 5 groups characterised by different functional domains, such as the calcium-binding EF hand (see PDOC00018 from PROSITEDOC), PH (see PDOC50003 from PROSITEDOC), SAM (see PDOC50105 from PROSITEDOC) , DAG/PE-binding C1 domain (see PDOC00379 from PROSITEDOC) and ankyrin repeats (see PDOC50088 from PROSITEDOC) []. In bacteria, an integral membrane DAG kinase forms a homotrimeric protein that lacks the DAGKc domain (see PDOC00820 from PROSITEDOC). In contrast, the bacterial yegS protein is a soluble cytosolic protein that contains the DAGKc domain in the N-terminal part. YegS is a lipid kinase with two structural domains, wherein the active site is located in the interdomain cleft, C-terminal to the DAGKc domain which forms an alpha/beta fold []. The tertiary structure resembles that of NAD kinases and contains a metal-binding site in the C-terminal region [, ]. This domain is usually associated with an accessory domain (see IPR000756 from INTERPRO).; GO: 0004143 diacylglycerol kinase activity, 0007205 activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; PDB: 2JGR_A 2BON_A 3T5P_D 3S40_A 2P1R_A 2QV7_A 2QVL_A.
Probab=99.87 E-value=6e-22 Score=175.62 Aligned_cols=125 Identities=29% Similarity=0.405 Sum_probs=84.9
Q ss_pred cEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCc-cEEEEEcCchhH
Q 011722 82 PMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQK-MRIVVAGGDGTV 160 (479)
Q Consensus 82 ~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~-~~Vvv~GGDGTv 160 (479)
+++||+||+||++++. ++++++.|.... +++... .|+..++++.+++... .... ++||++|||||+
T Consensus 1 k~~vi~Np~sG~~~~~--~~~v~~~l~~~~-~~~~~~-----~t~~~~~~~~~~~~~~-----~~~~~~~ivv~GGDGTl 67 (130)
T PF00781_consen 1 KVLVIINPKSGGGRAK--WKKVEPALRAAG-IDYEVI-----ETESAGHAEALARILA-----LDDYPDVIVVVGGDGTL 67 (130)
T ss_dssp SEEEEEETTSTTSHHH--HHHHHHHHHHTT-CEEEEE-----EESSTTHHHHHHHHHH-----HTTS-SEEEEEESHHHH
T ss_pred CEEEEECCCCCCCchh--HHHHHHHHHHcC-CceEEE-----EEeccchHHHHHHHHh-----hccCccEEEEEcCccHH
Confidence 5899999999999887 477777776553 333332 2334567777765221 2344 899999999999
Q ss_pred HHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHH-HHHHHHHHHHcCCceeeeeeEE
Q 011722 161 GWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKS-AVKRTLQRASAGPICRLDSWHA 230 (479)
Q Consensus 161 ~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~-al~~~l~~i~~g~~~~iD~~~i 230 (479)
+++++++.+... ...+|||+||+||+|||||+||++ .++.. ++. .+..+...++|+.++
T Consensus 68 ~~vv~~l~~~~~---~~~~~l~iiP~GT~N~~ar~lg~~----~~~~~~a~~----~~~~~~~~~~d~~~v 127 (130)
T PF00781_consen 68 NEVVNGLMGSDR---EDKPPLGIIPAGTGNDFARSLGIP----SDPEANAAL----LIILGRVRKIDVGKV 127 (130)
T ss_dssp HHHHHHHCTSTS---SS--EEEEEE-SSS-HHHHHTT------SSHHH-HHH----HHHHSEEEEEEEEEE
T ss_pred HHHHHHHhhcCC---CccceEEEecCCChhHHHHHcCCC----CCcHHHHHH----HHHhCCCcEeEEEEe
Confidence 999999987532 126799999999999999999994 44433 222 234567779998765
No 20
>smart00045 DAGKa Diacylglycerol kinase accessory domain (presumed). Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. DAG can be produced from the hydrolysis of phosphatidylinositol 4,5-bisphosphate (PIP2) by a phosphoinositide-specific phospholipase C and by the degradation of phosphatidylcholine (PC) by a phospholipase C or the concerted actions of phospholipase D and phosphatidate phosphohydrolase. This domain might either be an accessory domain or else contribute to the catalytic domain. Bacterial homologues are known.
Probab=99.87 E-value=7.6e-22 Score=181.36 Aligned_cols=160 Identities=34% Similarity=0.588 Sum_probs=117.8
Q ss_pred eEeeEEeeehhHHHhhHhhhhcccCCCccccCCCcceeeecccccccccccccCCCCcccccccceeeeEeeeecCCceE
Q 011722 274 VFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQ 353 (479)
Q Consensus 274 ~F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~rl~nkl~Y~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~i~~v~~~~~e~ 353 (479)
+|+|++||||||+|++.+++.|+++|.++++++.|+++|+..+++.+|... + +.. ..++++. ++ ++.
T Consensus 1 ~~~N~~giGfDA~V~~~~~~~r~~~~~~~~~~~~g~l~Y~~~~l~~l~~~~-~------~~~--~~~~~i~-~d---g~~ 67 (160)
T smart00045 1 VMNNYFSIGVDAHIALEFHNKREANPEKFNSRLKNKMWYFELGTKDLFFRT-C------KDL--HERIELE-CD---GVD 67 (160)
T ss_pred CccccccccHhHHHHHHHHHHhhcCchhhcccceeeeeeeecchHHhhhcc-c------cch--hhceEEE-EC---CEe
Confidence 489999999999999999998887777666677799999999987754211 0 000 1133333 32 344
Q ss_pred EeeCCcceEEEEeccCCCCcCCCCCCCCCchhhhccCCccccCCCCeeEEEEEccchhHHHHHHhhccceEEeeeeEEEE
Q 011722 354 VAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQGWHASFVMVELISAKHIAQAAAIRL 433 (479)
Q Consensus 354 ~~~~~~~~~ivv~N~~~~ggG~~~wg~~~p~~~~~~~~~~a~~dDGlLeVv~~~~~~~~~~l~~~l~~g~~l~q~~~i~I 433 (479)
.+.+.++.+++++|++|||||+.+|...++.| ++||+|+++||+|||+++++.+++..++..-..+.++.|+++++|
T Consensus 68 ~~~~~~~~~v~v~N~~~~ggG~~i~p~~~~~~---~~~p~a~~~DG~ldv~~~~~~~~~~~~~~~~~~~v~~~~~~~v~i 144 (160)
T smart00045 68 VDLPNSLEGIAVLNIPSYGGGTNLWGTTDKED---LNFSKQSHDDGLLEVVGLTGAMHMAQIRQVGLAGRRIAQCSEVRI 144 (160)
T ss_pred ccCCCCccEEEEECCCccccCcccccCCcccc---cccCCCCCCCceEEEEEEcCchhhhhhhhccCCCceeecCceEEE
Confidence 43332578999999999999999986544333 578999999999999999997776655432235678889999995
Q ss_pred EecCCccccceEEecCCc
Q 011722 434 EFRGGEWKDAFMQMDGEP 451 (479)
Q Consensus 434 ~~~~~~~~~~~~qiDGE~ 451 (479)
++.. .+++++|+|||+
T Consensus 145 ~i~~--~~~~~~q~DGE~ 160 (160)
T smart00045 145 TIKT--SKTIPMQVDGEP 160 (160)
T ss_pred EEec--CCceeeecCCCC
Confidence 5432 278999999996
No 21
>smart00046 DAGKc Diacylglycerol kinase catalytic domain (presumed). Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. DAG can be produced from the hydrolysis of phosphatidylinositol 4,5-bisphosphate (PIP2) by a phosphoinositide-specific phospholipase C and by the degradation of phosphatidylcholine (PC) by a phospholipase C or the concerted actions of phospholipase D and phosphatidate phosphohydrolase. This domain is presumed to be the catalytic domain. Bacterial homologues areknown.
Probab=99.84 E-value=9.9e-21 Score=166.73 Aligned_cols=101 Identities=47% Similarity=0.844 Sum_probs=74.8
Q ss_pred EEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhHHHH
Q 011722 84 VVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWV 163 (479)
Q Consensus 84 lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv~~V 163 (479)
+||+||+||++++.+.+.+++..+.+.+++.... ....++..++++ ...++.|+++|||||+++|
T Consensus 1 lvi~NP~sG~~~~~~~~~~~~~~l~~~~v~~t~~--------~~~~~~~~~~~~-------~~~~d~vvv~GGDGTi~~v 65 (124)
T smart00046 1 LVFVNPKSGGGKGVKLLRKFRLLLNPAQVFDLTK--------KGPAAALVIFRD-------LPKFDRVLVCGGDGTVGWV 65 (124)
T ss_pred CEEEcCCCCCCccHHHHHHHHHHcCCceEEEEec--------CChHHHHHHHhh-------cCcCCEEEEEccccHHHHH
Confidence 5899999999999889999988887654332221 122344444332 2346799999999999999
Q ss_pred HHHHhhccccCCCCCCcEEeecCCCccccccccCCCCC
Q 011722 164 LGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGS 201 (479)
Q Consensus 164 l~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~ 201 (479)
+|+|.+... ..+.+|||+||+||||||||+|||+.+
T Consensus 66 vn~l~~~~~--~~~~~plgiiP~GTgNdfar~lgi~~~ 101 (124)
T smart00046 66 LNALDKREL--PLPEPPVAVLPLGTGNDLARSLGWGGG 101 (124)
T ss_pred HHHHHhccc--ccCCCcEEEeCCCChhHHHHHcCCCCC
Confidence 999986421 012289999999999999999999654
No 22
>KOG1115 consensus Ceramide kinase [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.74 E-value=4.2e-17 Score=163.53 Aligned_cols=309 Identities=15% Similarity=0.089 Sum_probs=197.0
Q ss_pred CCCCCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcC
Q 011722 77 QPPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG 156 (479)
Q Consensus 77 ~~~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GG 156 (479)
..+++.++|||||.+|+|+|.++++.+..++ -+..+.+.-.+|+..+||.+..-+... ++...+|-||++||
T Consensus 155 ~~RPknllvFinPfgGkG~g~ki~e~V~~~F------~la~v~tkvivTErAnhA~d~~~ei~~--~~~~~yDGiv~VGG 226 (516)
T KOG1115|consen 155 VERPKNLLVFINPFGGKGNGSKIWETVSKIF------ILAKVNTKVIVTERANHAFDVMAEIQN--KELHTYDGIVAVGG 226 (516)
T ss_pred hcCCccEEEEEcCCCCCCcccchhhhhhhhE------EeeecceeEEEEccccchhhhhhhCCH--hhhhhcccEEEecC
Confidence 4568899999999999999999999866653 333333444668888998886544321 23456889999999
Q ss_pred chhHHHHHHHHhhccc------c-C-----CCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCcee
Q 011722 157 DGTVGWVLGSVGELNK------Q-G-----REPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICR 224 (479)
Q Consensus 157 DGTv~~Vl~~l~~~~~------~-~-----~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~ 224 (479)
||-.||+|+|+..... + + ..+.+-+||||.|+.|...-+-- |. .|+ +..+| .|.-|+...
T Consensus 227 DG~FnEiL~G~llrtQ~~ag~~i~~P~~~lv~~~~RfGiIpAGStd~iv~~t~-gt---~D~---~TSAl-HI~lG~~l~ 298 (516)
T KOG1115|consen 227 DGFFNEILNGYLLRTQEVAGFRIEDPDHPLVSERPRFGIIPAGSTDAIVMCTT-GT---RDP---VTSAL-HIILGRKLF 298 (516)
T ss_pred chhHHHHHhhhhhhhhhhcCcccCCCCCcccCCCceeeeecCCCcCeEEEEec-cC---Ccc---cccee-eeEecccee
Confidence 9999999999754311 0 0 12446799999999999987763 22 232 22223 355699999
Q ss_pred eeeeEEEEecCCCCcCCCCCCCCCCccccccccccccCCCCCcccceeceEeeEEeeehhHHHhhHhhhhcccCCCcccc
Q 011722 225 LDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQG 304 (479)
Q Consensus 225 iD~~~i~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~ 304 (479)
+|+-.+.- .+ ..-||-.|.+|.||.++|....+++|+.
T Consensus 299 vDVctVht----------------------------~~-------kLiRysaSa~gYGFyGDvl~dSEKYRWm------- 336 (516)
T KOG1115|consen 299 VDVCTVHT----------------------------IE-------KLIRYSASAAGYGFYGDVLSDSEKYRWM------- 336 (516)
T ss_pred eeeeeeee----------------------------cc-------hheeeehhhhcccccchhhhhhhhhhcc-------
Confidence 99976521 00 1248899999999999999999888764
Q ss_pred CCCcceeeecccccccccccccCCCCcccccccceee------------eEee-eecCCceEEeeCCcceEEEEeccCCC
Q 011722 305 PISNKLIYSGYSCTQGWFLTPCISDPNLRGLKNILRM------------HVKK-VNCSEWEQVAVPKSVRAIVALNLHNY 371 (479)
Q Consensus 305 rl~nkl~Y~~~~~~~~~f~~~~~~~~~~~~l~~~~~~------------~i~~-v~~~~~e~~~~~~~~~~ivv~N~~~~ 371 (479)
|-..|-..+++.+.-. .|. ++.-..... -... -+.+.|+. +.++...|.++|+|..
T Consensus 337 ---Gp~RYDfsglKtflkH-~~Y-----egeVsFlpa~sen~~qe~~~~g~~~~~~~k~Wq~--~~g~Fl~V~c~aipci 405 (516)
T KOG1115|consen 337 ---GPKRYDFSGLKTFLKH-RSY-----EGEVSFLPAESENPCQEPCPSGASLHTRSKTWQR--NTGRFLKVLCRAIPCI 405 (516)
T ss_pred ---CchhhhhHHHHHHHhc-ccc-----ceEEEecccccCCchhccccccCCcccCcchhhh--hhhheeeeeEeecccc
Confidence 3345777777653211 111 110000000 0000 01122442 3456777888888887
Q ss_pred CcCCCCCCCCCchhhhccCCccccCCCCeeEEEEEccchhHHHHHHhhc----cce------EEeeeeEEEEEecCC---
Q 011722 372 ASGRNPWGNLSPEYLEKKGFVEAHADDGLLEIFGLKQGWHASFVMVELI----SAK------HIAQAAAIRLEFRGG--- 438 (479)
Q Consensus 372 ggG~~~wg~~~p~~~~~~~~~~a~~dDGlLeVv~~~~~~~~~~l~~~l~----~g~------~l~q~~~i~I~~~~~--- 438 (479)
..- .|.|. + |...++||-+|+++.+..++..++-.... .+. ....+..+...+...
T Consensus 406 C~~-~PrGL-a---------P~T~LndGs~dLil~R~~SRF~fi~fl~r~a~~~~qfdf~fVe~y~v~~v~~~s~~~d~~ 474 (516)
T KOG1115|consen 406 CNS-KPRGL-A---------PSTTLNDGSEDLILCRTKSRFLFIGFLVRSARNERQFDFLFVEAYLVDGVLHLSLIKDCS 474 (516)
T ss_pred ccC-CCCCc-C---------CccccCCCccceeeeecccchHHHHHHHHHhhcccccCceeeeeeeeeeEEEEeecCCCC
Confidence 653 33332 3 57899999999999999777654322111 111 123456666544322
Q ss_pred ccccceEEecCCccCCCCCCCCceEEEEEeecc
Q 011722 439 EWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPF 471 (479)
Q Consensus 439 ~~~~~~~qiDGE~~~~~~~~~~~~~v~i~~~p~ 471 (479)
..+.....+|||.+.|| .+++|+.=|.
T Consensus 475 ~~d~~eWN~DGeile~p------~~lh~rlHpq 501 (516)
T KOG1115|consen 475 RPDYLEWNLDGEILEQP------KPLHFRLHPQ 501 (516)
T ss_pred CCCcceeccCcchhcCC------cceEEEechh
Confidence 23456789999999986 3688887664
No 23
>KOG4435 consensus Predicted lipid kinase [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.19 E-value=8.5e-11 Score=118.37 Aligned_cols=136 Identities=21% Similarity=0.151 Sum_probs=91.9
Q ss_pred CCCCCCCcEEEEEcCCCCCCChhHHHHHH-HHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEE
Q 011722 75 GVQPPEAPMVVFINSRSGGRHGPELKERL-QELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVV 153 (479)
Q Consensus 75 ~~~~~~~~~lvivNP~SG~~~~~~~~~~l-~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv 153 (479)
.|....++++|++||.+.++.....+.+- ..+|.- .++++.+++ |.+.++++.|++..+ ...|.|+|
T Consensus 55 pp~~~~Kkv~V~~Np~ank~~~r~~f~kna~P~lHL-aG~~V~Ivk-----td~~gqak~l~e~~~------t~~Dii~V 122 (535)
T KOG4435|consen 55 PPETRPKKVFVLVNPEANKRGCRDQFNKNALPLLHL-AGVQVDIVK-----TDNQGQAKALAEAVD------TQEDIIYV 122 (535)
T ss_pred CcccccceEEEEechhhccchhhhhhhcccchheee-ccceEEEEe-----cCcHHHHHHHHHHhc------cCCCeEEE
Confidence 45567899999999999986554444432 234433 358888766 447799999997654 23499999
Q ss_pred EcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCC-CCcHHHHHHHHHHHHHcCCc---eeeee
Q 011722 154 AGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSF-PFAWKSAVKRTLQRASAGPI---CRLDS 227 (479)
Q Consensus 154 ~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~-p~~~~~al~~~l~~i~~g~~---~~iD~ 227 (479)
+|||||+++|+.|+.+.+ ....|++++|+|--|--..+.-. .-| ..|..+.+..++.++++++. .++|+
T Consensus 123 aGGDGT~~eVVTGi~Rrr----~~~~pv~~~P~G~~~l~~~s~l~-~vfe~~d~V~h~~~a~~avikde~ksv~~fdv 195 (535)
T KOG4435|consen 123 AGGDGTIGEVVTGIFRRR----KAQLPVGFYPGGYDNLWLKSMLP-SVFENSDDVRHACEAAMAVIKDEKKSVYAFDV 195 (535)
T ss_pred ecCCCcHHHhhHHHHhcc----cccCceeeccCccchHhhhhhch-hhhccchHHHHHHHHHHHHhcccccceEEEEe
Confidence 999999999999998854 36789999999988765433311 111 12333334444445666666 66776
No 24
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=98.34 E-value=3.9e-06 Score=83.96 Aligned_cols=120 Identities=13% Similarity=0.059 Sum_probs=74.6
Q ss_pred cEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHh-cchhhhhccCCccEEEEEcCchhH
Q 011722 82 PMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAE-LGDFCAKDTRQKMRIVVAGGDGTV 160 (479)
Q Consensus 82 ~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~-~~~~~a~~~~~~~~Vvv~GGDGTv 160 (479)
++.+++|+.. ....++++++.+.|.... +++.... . .+...+++...+. .. ...+.+.||++|||||+
T Consensus 2 ~v~iv~~~~k--~~~~~~~~~I~~~L~~~g-~~v~v~~-~--~~~~~~~~~~~~~~~~-----~~~~~d~vi~iGGDGTl 70 (277)
T PRK03708 2 RFGIVARRDK--EEALKLAYRVYDFLKVSG-YEVVVDS-E--TYEHLPEFSEEDVLPL-----EEMDVDFIIAIGGDGTI 70 (277)
T ss_pred EEEEEecCCC--HHHHHHHHHHHHHHHHCC-CEEEEec-c--hhhhcCcccccccccc-----cccCCCEEEEEeCcHHH
Confidence 5778888744 466778899998887653 4444321 0 0111111111110 10 01356899999999999
Q ss_pred HHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEE
Q 011722 161 GWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHA 230 (479)
Q Consensus 161 ~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i 230 (479)
.++++ +.. ..+|+..||+||. +|...+.. .+ +..+++++.+|....-.+..+
T Consensus 71 L~a~~-~~~-------~~~pi~gIn~G~l-GFl~~~~~-----~~----~~~~l~~i~~g~~~~~~r~~l 122 (277)
T PRK03708 71 LRIEH-KTK-------KDIPILGINMGTL-GFLTEVEP-----EE----TFFALSRLLEGDYFIDERIKL 122 (277)
T ss_pred HHHHH-hcC-------CCCeEEEEeCCCC-CccccCCH-----HH----HHHHHHHHHcCCceEEEeEEE
Confidence 99999 654 4789999999999 88877642 23 445666677887654333333
No 25
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=98.28 E-value=5.7e-06 Score=83.91 Aligned_cols=125 Identities=12% Similarity=0.029 Sum_probs=77.1
Q ss_pred CCCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 79 ~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
.++++++|+|| |.....+...++.+.|.+. .+++....... .......+... .....+.|+++||||
T Consensus 2 ~~kkv~lI~n~--~~~~~~~~~~~i~~~L~~~-g~~v~v~~~~~----~~~~~~~~~~~------~~~~~d~vi~~GGDG 68 (305)
T PRK02645 2 QLKQVIIAYKA--GSSQAKEAAERCAKQLEAR-GCKVLMGPSGP----KDNPYPVFLAS------ASELIDLAIVLGGDG 68 (305)
T ss_pred CcCEEEEEEeC--CCHHHHHHHHHHHHHHHHC-CCEEEEecCch----hhccccchhhc------cccCcCEEEEECCcH
Confidence 46789999999 4445567788888878654 46654422111 00000111100 123578999999999
Q ss_pred hHHHHHHHHhhccccCCCCCCcEEeecC-CCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEE
Q 011722 159 TVGWVLGSVGELNKQGREPVPPVAIIPL-GTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVI 232 (479)
Q Consensus 159 Tv~~Vl~~l~~~~~~~~~~~~plgiIPl-GTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~~ 232 (479)
|+.++++.+.. .++|+..|.+ |+-.=|+..-.. .. - ..+++++.+|...--....+.+
T Consensus 69 T~l~~~~~~~~-------~~~pv~gin~~G~lGFL~~~~~~----~~----~-~~~l~~i~~g~~~i~~r~~L~~ 127 (305)
T PRK02645 69 TVLAAARHLAP-------HDIPILSVNVGGHLGFLTHPRDL----LQ----D-ESVWDRLQEDRYAIERRMMLQA 127 (305)
T ss_pred HHHHHHHHhcc-------CCCCEEEEecCCcceEecCchhh----cc----h-HHHHHHHHcCCceEEEeeEEEE
Confidence 99999999864 5789999998 776555532111 11 1 3456667788876555555544
No 26
>COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only]
Probab=97.82 E-value=0.00014 Score=73.46 Aligned_cols=58 Identities=38% Similarity=0.387 Sum_probs=44.2
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc-cccCCCCCCCCcHHHHHHHHHHHHHcC
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS-RSFGWGGSFPFAWKSAVKRTLQRASAG 220 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA-rslg~g~~~p~~~~~al~~~l~~i~~g 220 (479)
++-+.|+.+|||||...|++++. .+.|+-=||.||-|-+. ..+. |. +..+++..+.++
T Consensus 99 ~gVdlIvfaGGDGTarDVa~av~--------~~vPvLGipaGvk~~SgvfA~~-----P~----~aa~l~~~~lkg 157 (355)
T COG3199 99 RGVDLIVFAGGDGTARDVAEAVG--------ADVPVLGIPAGVKNYSGVFALS-----PE----DAARLLGAFLKG 157 (355)
T ss_pred cCceEEEEeCCCccHHHHHhhcc--------CCCceEeeccccceeccccccC-----hH----HHHHHHHHHhcc
Confidence 45789999999999999999983 47889899999999775 3221 32 345566667777
No 27
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.67 E-value=0.00053 Score=69.20 Aligned_cols=126 Identities=13% Similarity=0.078 Sum_probs=73.2
Q ss_pred CCCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 79 ~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
.++++.+|.||.. ....++.+++.+.|.++. +++....... ...+. .... ..+......+.|.||+.||||
T Consensus 4 ~~~~i~iv~~~~~--~~~~~~~~~i~~~l~~~g-~~v~~~~~~~---~~~~~-~~~~--~~~~~~~~~~~d~vi~lGGDG 74 (292)
T PRK03378 4 HFKCIGIVGHPRH--PTALTTHEMLYHWLTSKG-YEVIVEQQIA---HELQL-KNVK--TGTLAEIGQQADLAIVVGGDG 74 (292)
T ss_pred cCCEEEEEEeCCC--HHHHHHHHHHHHHHHHCC-CEEEEecchh---hhcCc-cccc--ccchhhcCCCCCEEEEECCcH
Confidence 3677999999855 355678888888886543 4443321000 00000 0000 000000012468999999999
Q ss_pred hHHHHHHHHhhccccCCCCCCcEEeecCCCcc-ccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEE
Q 011722 159 TVGWVLGSVGELNKQGREPVPPVAIIPLGTGN-DLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAV 231 (479)
Q Consensus 159 Tv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgN-DfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~ 231 (479)
|+..++..+.. .. +.|||.++|| .|...+.. .+ +...++++.+|....-.+..++
T Consensus 75 T~L~aa~~~~~-------~~--~Pilgin~G~lGFl~~~~~-----~~----~~~~l~~i~~g~~~i~~r~~L~ 130 (292)
T PRK03378 75 NMLGAARVLAR-------YD--IKVIGINRGNLGFLTDLDP-----DN----ALQQLSDVLEGHYISEKRFLLE 130 (292)
T ss_pred HHHHHHHHhcC-------CC--CeEEEEECCCCCcccccCH-----HH----HHHHHHHHHcCCceEEEEEEEE
Confidence 99999988754 22 4578888888 77776642 23 4445556778876544444443
No 28
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.56 E-value=0.0012 Score=66.79 Aligned_cols=127 Identities=13% Similarity=-0.015 Sum_probs=72.8
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchh
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGT 159 (479)
++++.||+||... ...+..+++.+.|.++ .+++........ ....+........ ....+.+.|++.|||||
T Consensus 4 ~~~v~iv~~~~k~--~a~e~~~~i~~~L~~~-giev~v~~~~~~--~~~~~~~~~~~~~----~~~~~~d~vi~~GGDGt 74 (295)
T PRK01231 4 FRNIGLIGRLGSS--SVVETLRRLKDFLLDR-GLEVILDEETAE--VLPGHGLQTVSRK----LLGEVCDLVIVVGGDGS 74 (295)
T ss_pred CCEEEEEecCCCH--HHHHHHHHHHHHHHHC-CCEEEEecchhh--hcCcccccccchh----hcccCCCEEEEEeCcHH
Confidence 5579999998774 5567888888888654 355443221100 0000000000000 00135789999999999
Q ss_pred HHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEE
Q 011722 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVI 232 (479)
Q Consensus 160 v~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~~ 232 (479)
+..++..+.. ..+|+--|.+|+-.=|+ .+ +. +.+..+++++.+|....-.+..+++
T Consensus 75 ~l~~~~~~~~-------~~~Pvlgin~G~lGFl~-~~------~~---~~~~~~l~~~~~g~~~i~~r~~L~~ 130 (295)
T PRK01231 75 LLGAARALAR-------HNVPVLGINRGRLGFLT-DI------RP---DELEFKLAEVLDGHYQEEERFLLEA 130 (295)
T ss_pred HHHHHHHhcC-------CCCCEEEEeCCcccccc-cC------CH---HHHHHHHHHHHcCCceEEEEEEEEE
Confidence 9999988753 46676667777533221 11 21 2355566677788766555555544
No 29
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.43 E-value=0.068 Score=52.99 Aligned_cols=41 Identities=12% Similarity=0.195 Sum_probs=31.2
Q ss_pred eeeeEEEEEecCCccccceEEecCCccCCCCCCCCceEEEEEeeccccccc
Q 011722 426 AQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLMI 476 (479)
Q Consensus 426 ~q~~~i~I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~v~i~~~p~~~~~~ 476 (479)
-+.++++|++. ++..+++|||.... ...|+|+..|.+..++
T Consensus 194 p~~~~I~I~~~----~~~~l~iDGe~~~~------~~~I~I~~s~~~l~li 234 (256)
T PRK14075 194 PSNEKVTVESQ----RDINLIVDGVLVGK------TNRITVKKSRRYVRIL 234 (256)
T ss_pred CCCCEEEEEEC----CceEEEECCCCcCC------CcEEEEEECCCEEEEE
Confidence 35778888875 57889999998532 2379999999877665
No 30
>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2.7.1.23 from EC. The enzymes catalyse the phosphorylation of NAD to NADP utilizing ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus.; GO: 0003951 NAD+ kinase activity, 0008152 metabolic process; PDB: 1U0T_B 1U0R_D 1Y3H_A 1Y3I_A 3AFO_B 1YT5_B 2AN1_A 2I2A_A 3V8P_A 2I1W_A ....
Probab=97.33 E-value=0.0011 Score=66.73 Aligned_cols=121 Identities=21% Similarity=0.153 Sum_probs=71.3
Q ss_pred cEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHh----------------------cch
Q 011722 82 PMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAE----------------------LGD 139 (479)
Q Consensus 82 ~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~----------------------~~~ 139 (479)
++.||+||..- ...+..+++.++|.+.+++.+..... -.+.+.. .+.
T Consensus 1 kVgii~np~~~--~~~~~~~~~~~~L~~~~~~~v~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (285)
T PF01513_consen 1 KVGIIANPNKP--EAIELANELARWLLEKQGIEVLVEGS---------IAEDILEAIKKRYEVISVEKKLKTLDDTRNAL 69 (285)
T ss_dssp -EEEEESSCGH--CCCHHHHHHHHHHHHTTTEEEEEEHH---------HHHSHCCCSHSCCCCCTTSHCCCCTCEEEECC
T ss_pred CEEEEEcCCCH--HHHHHHHHHHHHHHhCCCEEEEEChH---------HHHHHHHhccccccccccccccccccccchhh
Confidence 47899999843 34567788888887763343332110 0000000 000
Q ss_pred hhhhccCCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHc
Q 011722 140 FCAKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASA 219 (479)
Q Consensus 140 ~~a~~~~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~ 219 (479)
......+.|.||++|||||+-.++..+.. ..+|+--|++||-|=|+. +. +.+..+++ +++.+
T Consensus 70 -~~~~~~~~D~ii~lGGDGT~L~~~~~~~~-------~~~Pilgin~G~lgfl~~-~~-----~~~~~~~l----~~~~~ 131 (285)
T PF01513_consen 70 -EEMLEEGVDLIIVLGGDGTFLRAARLFGD-------YDIPILGINTGTLGFLTE-FE-----PEDIEEAL----EKILA 131 (285)
T ss_dssp -HHHHCCCSSEEEEEESHHHHHHHHHHCTT-------ST-EEEEEESSSSTSSSS-EE-----GCGHHHHH----HHHHH
T ss_pred -hhhcccCCCEEEEECCCHHHHHHHHHhcc-------CCCcEEeecCCCcccccc-CC-----HHHHHHHH----HHHhc
Confidence 00113567999999999999999998864 478999999999655544 32 34444444 44556
Q ss_pred CCceeeeeeEEE
Q 011722 220 GPICRLDSWHAV 231 (479)
Q Consensus 220 g~~~~iD~~~i~ 231 (479)
|....-.+..++
T Consensus 132 g~~~~~~r~~l~ 143 (285)
T PF01513_consen 132 GEYSIEERMRLE 143 (285)
T ss_dssp THCEEEEEEEEE
T ss_pred CCeEEEEeeeEE
Confidence 666555555444
No 31
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.94 E-value=0.015 Score=58.67 Aligned_cols=125 Identities=14% Similarity=0.049 Sum_probs=71.3
Q ss_pred CCCCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCc
Q 011722 78 PPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (479)
Q Consensus 78 ~~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGD 157 (479)
..++++.+|.||.. ...++.+++.+.|.++. +++...... +..+............+.|.||+.|||
T Consensus 8 ~~~~~i~ii~~~~~---~~~~~~~~i~~~l~~~g-~~~~~~~~~---------~~~~~~~~~~~~~~~~~~Dlvi~iGGD 74 (287)
T PRK14077 8 KNIKKIGLVTRPNV---SLDKEILKLQKILSIYK-VEILLEKES---------AEILDLPGYGLDELFKISDFLISLGGD 74 (287)
T ss_pred ccCCEEEEEeCCcH---HHHHHHHHHHHHHHHCC-CEEEEecch---------hhhhcccccchhhcccCCCEEEEECCC
Confidence 44778999999963 56778889988887653 444332110 011100000000001346899999999
Q ss_pred hhHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEE
Q 011722 158 GTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVI 232 (479)
Q Consensus 158 GTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~~ 232 (479)
||+=.++..+.. ..+|+--|.+|+ ||.=..++ + +.++.+++++.+|....-.+..+++
T Consensus 75 GT~L~aa~~~~~-------~~~PilGIN~G~-------lGFLt~~~--~-~~~~~~l~~i~~g~y~ie~r~~L~~ 132 (287)
T PRK14077 75 GTLISLCRKAAE-------YDKFVLGIHAGH-------LGFLTDIT--V-DEAEKFFQAFFQGEFEIEKPYMLSV 132 (287)
T ss_pred HHHHHHHHHhcC-------CCCcEEEEeCCC-------cccCCcCC--H-HHHHHHHHHHHcCCCeEEEEEEEEE
Confidence 999998887754 355655467776 44322222 1 2355667777888765444444433
No 32
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=96.74 E-value=0.027 Score=56.92 Aligned_cols=127 Identities=17% Similarity=0.090 Sum_probs=71.4
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchh
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGT 159 (479)
++.+.+|.|+.. ....+.++.+.+.|... .+++...... ....+ ...+-....+ ......+.||++|||||
T Consensus 5 ~~~v~iv~~~~~--~~~~e~~~~i~~~L~~~-g~~v~v~~~~---~~~~~-~~~~~~~~~~--~~~~~~d~vi~~GGDGt 75 (291)
T PRK02155 5 FKTVALIGRYQT--PGIAEPLESLAAFLAKR-GFEVVFEADT---ARNIG-LTGYPALTPE--EIGARADLAVVLGGDGT 75 (291)
T ss_pred CCEEEEEecCCC--HHHHHHHHHHHHHHHHC-CCEEEEecch---hhhcC-cccccccChh--HhccCCCEEEEECCcHH
Confidence 566889988865 35567788888877654 3554332110 00000 0000000000 00134689999999999
Q ss_pred HHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEE
Q 011722 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVI 232 (479)
Q Consensus 160 v~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~~ 232 (479)
+..++..+.. .++|+-=|.+|+-.=|+. + + + +.+...|+++.+|....-.++.+.+
T Consensus 76 ~l~~~~~~~~-------~~~pilGIn~G~lGFL~~---~----~--~-~~~~~~l~~~~~g~~~i~~r~~L~~ 131 (291)
T PRK02155 76 MLGIGRQLAP-------YGVPLIGINHGRLGFITD---I----P--L-DDMQETLPPMLAGNYEEEERMLLEA 131 (291)
T ss_pred HHHHHHHhcC-------CCCCEEEEcCCCcccccc---C----C--H-HHHHHHHHHHHcCCceEEEeEEEEE
Confidence 9999998864 355655577776543331 1 2 1 2355566677788876555555543
No 33
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.72 E-value=0.024 Score=57.59 Aligned_cols=128 Identities=13% Similarity=0.133 Sum_probs=72.8
Q ss_pred CCCCCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhH-HHHH------H--hcchhhhhccCC
Q 011722 77 QPPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLAC-LEKL------A--ELGDFCAKDTRQ 147 (479)
Q Consensus 77 ~~~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~-~~~l------a--~~~~~~a~~~~~ 147 (479)
+.+++++.+|.|+.. ....++.+++...|..+. +++....... ..... ...+ . .... ....+
T Consensus 2 ~~~~~~I~iv~~~~~--~~~~~~~~~l~~~L~~~g-~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 72 (306)
T PRK03372 2 MTASRRVLLVAHTGR--DEATEAARRVAKQLGDAG-IGVRVLDAEA---VDLGATHPAPDDFRAMEVVDADP---DAADG 72 (306)
T ss_pred CCCccEEEEEecCCC--HHHHHHHHHHHHHHHHCC-CEEEEeechh---hhhcccccccccccccccccchh---hcccC
Confidence 346778999999754 355678888888776543 4443321100 00000 0000 0 0000 00124
Q ss_pred ccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeee
Q 011722 148 KMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDS 227 (479)
Q Consensus 148 ~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~ 227 (479)
.|.||+.|||||+-.++..+.. ..+|+--|.+|+-.=|+..- +. .+..+++++.+|...--.+
T Consensus 73 ~D~vi~lGGDGT~L~aar~~~~-------~~~PilGIN~G~lGFL~~~~------~~----~~~~~l~~i~~g~y~i~~R 135 (306)
T PRK03372 73 CELVLVLGGDGTILRAAELARA-------ADVPVLGVNLGHVGFLAEAE------AE----DLDEAVERVVDRDYRVEER 135 (306)
T ss_pred CCEEEEEcCCHHHHHHHHHhcc-------CCCcEEEEecCCCceeccCC------HH----HHHHHHHHHHcCCceEEEe
Confidence 6899999999999999987654 45677778888854444311 22 3455666777887765554
Q ss_pred eEE
Q 011722 228 WHA 230 (479)
Q Consensus 228 ~~i 230 (479)
..+
T Consensus 136 ~~L 138 (306)
T PRK03372 136 MTL 138 (306)
T ss_pred eeE
Confidence 444
No 34
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.62 E-value=0.032 Score=56.51 Aligned_cols=128 Identities=14% Similarity=0.126 Sum_probs=71.1
Q ss_pred CCCCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCcc----cee-chhhHHHHHHhcchhhhhccCCccEEE
Q 011722 78 PPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHE----FVQ-YGLACLEKLAELGDFCAKDTRQKMRIV 152 (479)
Q Consensus 78 ~~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~----~~t-~~~~~~~~la~~~~~~a~~~~~~~~Vv 152 (479)
.+++++.+|.||..- ...++..++...|.++. +++....... ... ...++. .. ... ......|.||
T Consensus 3 ~~~~~i~ii~~~~~~--~~~~~~~~l~~~L~~~g-~~v~~~~~~~~~~~~~~~~~~~~~--~~-~~~---~~~~~~D~vi 73 (296)
T PRK04539 3 SPFHNIGIVTRPNTP--DIQDTAHTLITFLKQHG-FTVYLDEVGIKEGCIYTQDTVGCH--IV-NKT---ELGQYCDLVA 73 (296)
T ss_pred CCCCEEEEEecCCCH--HHHHHHHHHHHHHHHCC-CEEEEecccccccchhcccccccc--cc-chh---hcCcCCCEEE
Confidence 347789999998653 45678888888776543 4433211000 000 000000 00 000 0012468999
Q ss_pred EEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEE
Q 011722 153 VAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAV 231 (479)
Q Consensus 153 v~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~ 231 (479)
+.|||||+=.++..+.. ..+|+-=|-+|+ ||+=..++. +.+...++++.+|....-.+..+.
T Consensus 74 ~lGGDGT~L~aa~~~~~-------~~~PilGIN~G~-------lGFL~~~~~---~~~~~~l~~i~~g~~~~~~r~~l~ 135 (296)
T PRK04539 74 VLGGDGTFLSVAREIAP-------RAVPIIGINQGH-------LGFLTQIPR---EYMTDKLLPVLEGKYLAEERILIE 135 (296)
T ss_pred EECCcHHHHHHHHHhcc-------cCCCEEEEecCC-------CeEeeccCH---HHHHHHHHHHHcCCceEEEeeeEE
Confidence 99999999999987754 355655577776 444322221 235556667778876554444443
No 35
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.59 E-value=0.036 Score=56.35 Aligned_cols=127 Identities=14% Similarity=0.085 Sum_probs=68.3
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHH--------HHHhcchhhhhccCCccEE
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLE--------KLAELGDFCAKDTRQKMRI 151 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~--------~la~~~~~~a~~~~~~~~V 151 (479)
|+++.+|.|+.. ....++..++.+.|.++. +++....... ...+... .+.+ .. ......+.|.|
T Consensus 1 m~~igiv~n~~~--~~~~~~~~~l~~~L~~~g-~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~Dlv 72 (305)
T PRK02649 1 MPKAGIIYNDGK--PLAVRTAEELQDKLEAAG-WEVVRASSSG---GILGYANPDQPVCHTGIDQ-LV-PPGFDSSMKFA 72 (305)
T ss_pred CCEEEEEEcCCC--HHHHHHHHHHHHHHHHCC-CEEEEecchh---hhcCccccccccccccccc-cC-hhhcccCcCEE
Confidence 456889999844 345678888888886543 4443311100 0000000 0000 00 00001246899
Q ss_pred EEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEE
Q 011722 152 VVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAV 231 (479)
Q Consensus 152 vv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~ 231 (479)
|+.|||||+=.++..+.. ..+|+--|.+|+ ||+=..++ + +.+...|+++.+|...--.+-.++
T Consensus 73 i~iGGDGTlL~aar~~~~-------~~iPilGIN~G~-------lGFLt~~~--~-~~~~~~l~~l~~g~y~ie~r~~L~ 135 (305)
T PRK02649 73 IVLGGDGTVLSAARQLAP-------CGIPLLTINTGH-------LGFLTEAY--L-NQLDEAIDQVLAGQYTIEERTMLT 135 (305)
T ss_pred EEEeCcHHHHHHHHHhcC-------CCCcEEEEeCCC-------CcccccCC--H-HHHHHHHHHHHcCCcEEEEeeeEE
Confidence 999999999999987754 355655566775 34322111 1 235566777778876544444443
No 36
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.37 E-value=0.056 Score=54.60 Aligned_cols=122 Identities=14% Similarity=0.136 Sum_probs=68.5
Q ss_pred cEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHh---------cchhhhhccCCccEEE
Q 011722 82 PMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAE---------LGDFCAKDTRQKMRIV 152 (479)
Q Consensus 82 ~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~---------~~~~~a~~~~~~~~Vv 152 (479)
++.+|.||.. ....++.+++.+.|.++. +++...... +..+.. ..++......+.|.||
T Consensus 2 ~igii~~~~~--~~~~~~~~~i~~~l~~~g-~~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~dlvi 69 (292)
T PRK01911 2 KIAIFGQTYQ--ESASPYIQELFDELEERG-AEVLIEEKF---------LDFLKQDLKFHPSYDTFSDNEELDGSADMVI 69 (292)
T ss_pred EEEEEeCCCC--HHHHHHHHHHHHHHHHCC-CEEEEecch---------hhhhccccccccccccccchhhcccCCCEEE
Confidence 4778888744 345677888888776543 444331100 010000 0000000012468999
Q ss_pred EEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEE
Q 011722 153 VAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVI 232 (479)
Q Consensus 153 v~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~~ 232 (479)
+.|||||+=.++..+.. ..+|+-=|-+|+ ||+=..++ + +-++.+|+++.+|...--.+..+++
T Consensus 70 ~lGGDGT~L~aa~~~~~-------~~~PilGIN~G~-------lGFLt~~~--~-~~~~~~l~~i~~g~~~i~~r~~L~~ 132 (292)
T PRK01911 70 SIGGDGTFLRTATYVGN-------SNIPILGINTGR-------LGFLATVS--K-EEIEETIDELLNGDYTIEERSLLQL 132 (292)
T ss_pred EECCcHHHHHHHHHhcC-------CCCCEEEEecCC-------CCcccccC--H-HHHHHHHHHHHcCCceEEEEeeEEE
Confidence 99999999999987754 356655577776 44422222 1 2355667778888876555544443
No 37
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.30 E-value=0.058 Score=53.72 Aligned_cols=104 Identities=17% Similarity=0.145 Sum_probs=62.6
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhH
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv 160 (479)
..+.+|.|+.. ...++.+++.++|.++. +.+... ..+.|.|++.|||||+
T Consensus 3 ~~i~iv~~~~~---~a~~~~~~l~~~l~~~g-~~~~~~--------------------------~~~~D~vi~lGGDGT~ 52 (264)
T PRK03501 3 RNLFFFYKRDK---ELVEKVKPLKKIAEEYG-FTVVDH--------------------------PKNANIIVSIGGDGTF 52 (264)
T ss_pred cEEEEEECCCH---HHHHHHHHHHHHHHHCC-CEEEcC--------------------------CCCccEEEEECCcHHH
Confidence 46778888766 45678888888886643 332210 0235799999999999
Q ss_pred HHHHHHHhhccccCCCCCCcEEeecC-CCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEE
Q 011722 161 GWVLGSVGELNKQGREPVPPVAIIPL-GTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHA 230 (479)
Q Consensus 161 ~~Vl~~l~~~~~~~~~~~~plgiIPl-GTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i 230 (479)
=.++..+... ..+|+--|.+ |+ +|.=..++. +.+...++++.+|...--.+..+
T Consensus 53 L~a~~~~~~~------~~~pilgIn~~G~-------lGFL~~~~~---~~~~~~l~~i~~g~~~~~~r~~l 107 (264)
T PRK03501 53 LQAVRKTGFR------EDCLYAGISTKDQ-------LGFYCDFHI---DDLDKMIQAITKEEIEVRKYPTI 107 (264)
T ss_pred HHHHHHhccc------CCCeEEeEecCCC-------CeEcccCCH---HHHHHHHHHHHcCCcEEEEeeeE
Confidence 8888776431 2456433555 53 333222121 23556677778887654444433
No 38
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=95.91 E-value=0.14 Score=55.04 Aligned_cols=132 Identities=17% Similarity=0.205 Sum_probs=67.9
Q ss_pred CCCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCc-cce-ec--hhhHHHHHHhcchhhhhccCCccEEEEE
Q 011722 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPH-EFV-QY--GLACLEKLAELGDFCAKDTRQKMRIVVA 154 (479)
Q Consensus 79 ~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~-~~~-t~--~~~~~~~la~~~~~~a~~~~~~~~Vvv~ 154 (479)
+++.++||.||..- ...++..++...|.....+.+.+.... ..+ .. ..+.. .......+........|.||+.
T Consensus 193 ~p~~VgIV~n~~k~--~a~el~~~I~~~L~~~~gi~V~ve~~~a~~l~~~~~~~~~~-~~~~~~~~~~~l~~~~DlVIsi 269 (508)
T PLN02935 193 DPQTVLIITKPNST--SVRVLCAEMVRWLREQKGLNIYVEPRVKKELLSESSYFNFV-QTWEDEKEILLLHTKVDLVITL 269 (508)
T ss_pred CCCEEEEEecCCCH--HHHHHHHHHHHHHHhcCCCEEEEechhhhhhcccccccccc-ccccccchhhhcccCCCEEEEE
Confidence 47889999998653 455678888887763223343321100 000 00 00000 0000000000001346899999
Q ss_pred cCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEE
Q 011722 155 GGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHA 230 (479)
Q Consensus 155 GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i 230 (479)
|||||+=.++..+.. ..+||--|.+|+ ||+=..++ + +.+...|+++.+|...--.+-.+
T Consensus 270 GGDGTlL~Aar~~~~-------~~iPILGIN~G~-------LGFLt~i~--~-~e~~~~Le~il~G~y~Ie~R~~L 328 (508)
T PLN02935 270 GGDGTVLWAASMFKG-------PVPPVVPFSMGS-------LGFMTPFH--S-EQYRDCLDAILKGPISITLRHRL 328 (508)
T ss_pred CCcHHHHHHHHHhcc-------CCCcEEEEeCCC-------cceecccC--H-HHHHHHHHHHHcCCceEEEEeEE
Confidence 999999999987754 445655466665 22211111 1 23556677777887654444333
No 39
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=95.41 E-value=0.2 Score=55.37 Aligned_cols=123 Identities=15% Similarity=0.127 Sum_probs=69.0
Q ss_pred CCCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchh---hhhccCCccEEEEEc
Q 011722 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDF---CAKDTRQKMRIVVAG 155 (479)
Q Consensus 79 ~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~---~a~~~~~~~~Vvv~G 155 (479)
+++++.||.|+.. ....++..++.+.|.+.. +++..... .+..+.....+ ......+.|.||+.|
T Consensus 289 ~~~~i~iv~~~~~--~~~~~~~~~i~~~l~~~~-~~v~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dlvi~lG 356 (569)
T PRK14076 289 KPTKFGIVSRIDN--EEAINLALKIIKYLDSKG-IPYELESF---------LYNKLKNRLNEECNLIDDIEEISHIISIG 356 (569)
T ss_pred CCcEEEEEcCCCC--HHHHHHHHHHHHHHHHCC-CEEEEech---------hhhhhcccccccccccccccCCCEEEEEC
Confidence 3446888888753 355677888888776543 43332110 00111100000 000122468999999
Q ss_pred CchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEE
Q 011722 156 GDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHA 230 (479)
Q Consensus 156 GDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i 230 (479)
||||+=.++..+.. ..+|+-=|.+|+-.=|+. +. + +.+...|+++.+|...--.+-.+
T Consensus 357 GDGT~L~aa~~~~~-------~~~PilGin~G~lGFL~~-------~~--~-~~~~~~l~~~~~g~~~i~~r~~L 414 (569)
T PRK14076 357 GDGTVLRASKLVNG-------EEIPIICINMGTVGFLTE-------FS--K-EEIFKAIDSIISGEYEIEKRTKL 414 (569)
T ss_pred CcHHHHHHHHHhcC-------CCCCEEEEcCCCCCcCcc-------cC--H-HHHHHHHHHHHcCCceEEEeEEE
Confidence 99999999987754 456666688887433332 11 1 23555677778887654444333
No 40
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=94.63 E-value=0.43 Score=47.60 Aligned_cols=100 Identities=14% Similarity=0.163 Sum_probs=60.6
Q ss_pred cEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhHH
Q 011722 82 PMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVG 161 (479)
Q Consensus 82 ~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv~ 161 (479)
++.+|.|+ ..+..++.+++++.|.... +++. ..+.|.|++.|||||+=
T Consensus 2 ~i~Ii~~~---~~~~~~~~~~l~~~l~~~g-~~~~----------------------------~~~~Dlvi~iGGDGT~L 49 (265)
T PRK04885 2 KVAIISNG---DPKSKRVASKLKKYLKDFG-FILD----------------------------EKNPDIVISVGGDGTLL 49 (265)
T ss_pred EEEEEeCC---CHHHHHHHHHHHHHHHHcC-CccC----------------------------CcCCCEEEEECCcHHHH
Confidence 36677773 3345678888888776542 2210 02457999999999999
Q ss_pred HHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeee
Q 011722 162 WVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSW 228 (479)
Q Consensus 162 ~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~ 228 (479)
.++..+... ..++|+-=|.+|+-.=|+. +. +.+ +..+++++.+|....-.+-
T Consensus 50 ~a~~~~~~~-----~~~iPilGIN~G~lGFL~~-~~-----~~~----~~~~l~~i~~g~y~i~~r~ 101 (265)
T PRK04885 50 SAFHRYENQ-----LDKVRFVGVHTGHLGFYTD-WR-----PFE----VDKLVIALAKDPGQVVSYP 101 (265)
T ss_pred HHHHHhccc-----CCCCeEEEEeCCCceeccc-CC-----HHH----HHHHHHHHHcCCceEEEEe
Confidence 998877541 1356655577776433332 11 222 4556667778876544443
No 41
>PLN02727 NAD kinase
Probab=94.39 E-value=0.34 Score=55.45 Aligned_cols=116 Identities=14% Similarity=0.167 Sum_probs=65.6
Q ss_pred CCCCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHh--cc--------hhhhhccCC
Q 011722 78 PPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAE--LG--------DFCAKDTRQ 147 (479)
Q Consensus 78 ~~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~--~~--------~~~a~~~~~ 147 (479)
.+++.++||.+++. ...+...++.+.|..+..+++.+.. . .+..+.. .. .........
T Consensus 676 ~p~rtVgIV~K~~~---ea~~~~~eL~~~L~~~~gi~V~VE~-~--------~a~~l~~~~~~~~~~~~~~~~~~el~~~ 743 (986)
T PLN02727 676 STPKTVLLLKKLGQ---ELMEEAKEVASFLYHQEKMNVLVEP-D--------VHDIFARIPGFGFVQTFYSQDTSDLHER 743 (986)
T ss_pred CCCCEEEEEcCCcH---HHHHHHHHHHHHHHhCCCeEEEEec-c--------hHHHhhccccccccceecccchhhcccC
Confidence 46889999999876 3455667777777654235543321 1 0111100 00 000000124
Q ss_pred ccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCc
Q 011722 148 KMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPI 222 (479)
Q Consensus 148 ~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~ 222 (479)
.|.||+.|||||+=.++..+.. ..+||-=|.+|+ ||+=..++ +. -+...|+++.+|..
T Consensus 744 ~DLVIvLGGDGTlLrAar~~~~-------~~iPILGINlGr-------LGFLTdi~--~e-e~~~~L~~Il~G~y 801 (986)
T PLN02727 744 VDFVACLGGDGVILHASNLFRG-------AVPPVVSFNLGS-------LGFLTSHY--FE-DFRQDLRQVIHGNN 801 (986)
T ss_pred CCEEEEECCcHHHHHHHHHhcC-------CCCCEEEEeCCC-------ccccccCC--HH-HHHHHHHHHHcCCc
Confidence 6899999999999999987754 456766677774 44322222 21 24455666666654
No 42
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=94.31 E-value=0.61 Score=46.63 Aligned_cols=116 Identities=16% Similarity=0.171 Sum_probs=60.8
Q ss_pred cEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhHH
Q 011722 82 PMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVG 161 (479)
Q Consensus 82 ~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv~ 161 (479)
++.+++||.. ....++..++.+.|. . .+++..... .+..+.....+. . ..+.|.||+.|||||+=
T Consensus 2 ~i~iv~~~~~--~~~~~~~~~i~~~l~-~-g~~~~~~~~---------~~~~~~~~~~~~-~-~~~~D~vi~lGGDGT~L 66 (271)
T PRK01185 2 KVAFVIRKDC--KRCIKIAKSIIELLP-P-DWEIIYEME---------AAKALGMDGLDI-E-EINADVIITIGGDGTIL 66 (271)
T ss_pred EEEEEecCCC--HHHHHHHHHHHHHHh-c-CCEEEEech---------hhhhcCcccCcc-c-ccCCCEEEEEcCcHHHH
Confidence 4788888754 345667788888773 3 344332110 011110000000 0 12468999999999987
Q ss_pred HHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEE
Q 011722 162 WVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVI 232 (479)
Q Consensus 162 ~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~~ 232 (479)
.++..+ . +|+--|.+|+-.=|+ .++. +.+...|+++.+|...--.+..+.+
T Consensus 67 ~a~~~~---------~-~PilGIN~G~lGFL~-------~~~~---~~~~~~l~~i~~g~~~i~~r~~L~~ 117 (271)
T PRK01185 67 RTLQRA---------K-GPILGINMGGLGFLT-------EIEI---DEVGSAIKKLIRGEYFIDERMKLKV 117 (271)
T ss_pred HHHHHc---------C-CCEEEEECCCCccCc-------ccCH---HHHHHHHHHHHcCCcEEEEeeEEEE
Confidence 666532 1 244335777643333 1121 2355566677788765544544433
No 43
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=94.27 E-value=0.67 Score=46.03 Aligned_cols=35 Identities=23% Similarity=0.113 Sum_probs=27.5
Q ss_pred CccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCC
Q 011722 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGT 188 (479)
Q Consensus 147 ~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGT 188 (479)
+.|.|++.|||||+=.++..+.. ..+|+--|.+|+
T Consensus 33 ~~D~vi~iGGDGT~L~a~~~~~~-------~~iPilGIN~G~ 67 (259)
T PRK00561 33 GADYLFVLGGDGFFVSTAANYNC-------AGCKVVGINTGH 67 (259)
T ss_pred CCCEEEEECCcHHHHHHHHHhcC-------CCCcEEEEecCC
Confidence 46799999999999998887653 456766677775
No 44
>PLN02929 NADH kinase
Probab=92.48 E-value=0.7 Score=46.87 Aligned_cols=75 Identities=19% Similarity=0.161 Sum_probs=48.2
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCC---------cccc--ccccCCCCCCCCcHHHHHHHHH
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGT---------GNDL--SRSFGWGGSFPFAWKSAVKRTL 214 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGT---------gNDf--Arslg~g~~~p~~~~~al~~~l 214 (479)
.+.|.||+.|||||+=.++..+ . ..+|+-=|-+|+ -|.| .|++|.=..+. + +.+...|
T Consensus 63 ~~~Dlvi~lGGDGT~L~aa~~~-~-------~~iPvlGIN~Gp~~~~~~~~~~~~~~~~r~lGfL~~~~--~-~~~~~~L 131 (301)
T PLN02929 63 RDVDLVVAVGGDGTLLQASHFL-D-------DSIPVLGVNSDPTQKDEVEEYSDEFDARRSTGHLCAAT--A-EDFEQVL 131 (301)
T ss_pred CCCCEEEEECCcHHHHHHHHHc-C-------CCCcEEEEECCCcccccccccccccccccCccccccCC--H-HHHHHHH
Confidence 4678999999999999988877 4 345544466664 1333 45777643322 2 3466778
Q ss_pred HHHHcCCceeeeeeEEE
Q 011722 215 QRASAGPICRLDSWHAV 231 (479)
Q Consensus 215 ~~i~~g~~~~iD~~~i~ 231 (479)
+++.+|....-.+-.+.
T Consensus 132 ~~il~g~~~~~~r~~L~ 148 (301)
T PLN02929 132 DDVLFGRLKPTELSRIS 148 (301)
T ss_pred HHHHcCCceEEEeeeEE
Confidence 88888876554444443
No 45
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=91.68 E-value=0.92 Score=45.41 Aligned_cols=35 Identities=23% Similarity=0.219 Sum_probs=26.7
Q ss_pred CccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCC
Q 011722 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGT 188 (479)
Q Consensus 147 ~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGT 188 (479)
+.|.||+.|||||+=.++..+.. ..+|+--|.+|+
T Consensus 42 ~~d~vi~iGGDGT~L~aa~~~~~-------~~~PilgIn~G~ 76 (272)
T PRK02231 42 RAQLAIVIGGDGNMLGRARVLAK-------YDIPLIGINRGN 76 (272)
T ss_pred CCCEEEEECCcHHHHHHHHHhcc-------CCCcEEEEeCCC
Confidence 46899999999999999887754 345544457777
No 46
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=89.71 E-value=0.47 Score=46.74 Aligned_cols=36 Identities=28% Similarity=0.250 Sum_probs=27.8
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCC
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGT 188 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGT 188 (479)
.+.|.||+.|||||+=.++..+.. ..+|+-=|.+|+
T Consensus 24 ~~~Dlvi~iGGDGTlL~a~~~~~~-------~~~PvlGIN~G~ 59 (246)
T PRK04761 24 EEADVIVALGGDGFMLQTLHRYMN-------SGKPVYGMNRGS 59 (246)
T ss_pred ccCCEEEEECCCHHHHHHHHHhcC-------CCCeEEEEeCCC
Confidence 456899999999999999887654 356655577776
No 47
>COG0061 nadF NAD kinase [Coenzyme metabolism]
Probab=88.49 E-value=5.8 Score=39.83 Aligned_cols=70 Identities=24% Similarity=0.273 Sum_probs=47.8
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceee
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRL 225 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~i 225 (479)
...+.|++.|||||+-.++..+.. ..+|+-=|-+|+ ||.=..++ .+.++++++++.++..+-.
T Consensus 54 ~~~d~ivvlGGDGtlL~~~~~~~~-------~~~pilgin~G~-------lGFLt~~~---~~~~~~~~~~~~~~~~~~~ 116 (281)
T COG0061 54 EKADLIVVLGGDGTLLRAARLLAR-------LDIPVLGINLGH-------LGFLTDFE---PDELEKALDALLEGEYRIE 116 (281)
T ss_pred cCceEEEEeCCcHHHHHHHHHhcc-------CCCCEEEEeCCC-------cccccccC---HHHHHHHHHHHhcCceEEE
Confidence 467899999999999999988765 446666666663 34322223 2357777777888777766
Q ss_pred eeeEEEE
Q 011722 226 DSWHAVI 232 (479)
Q Consensus 226 D~~~i~~ 232 (479)
....+++
T Consensus 117 ~r~~l~~ 123 (281)
T COG0061 117 ERLLLEV 123 (281)
T ss_pred EeEEEEE
Confidence 6666654
No 48
>KOG4180 consensus Predicted kinase [General function prediction only]
Probab=87.10 E-value=0.83 Score=46.22 Aligned_cols=76 Identities=18% Similarity=0.227 Sum_probs=51.7
Q ss_pred cCCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEe--ecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCc
Q 011722 145 TRQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAI--IPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPI 222 (479)
Q Consensus 145 ~~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgi--IPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~ 222 (479)
....|.||-+|||||.--.+.-+.+ ...|.||| =|.|+---++- +..||..+..|+.+ +..|..
T Consensus 103 i~waD~VisvGGDGTfL~Aasrv~~------~~~PViGvNtDP~~Seg~lcL----~~~~~~n~~~al~k----~~sgnF 168 (395)
T KOG4180|consen 103 IRWADMVISVGGDGTFLLAASRVID------DSKPVIGVNTDPTGSEGHLCL----PDKYPSNPAGALCK----LTSGNF 168 (395)
T ss_pred CchhhEEEEecCccceeehhhhhhc------cCCceeeecCCCCcCcceEec----cccCCCCcHHHHHH----HHhccH
Confidence 4567899999999999888875544 25677777 57777766654 55567656666655 456766
Q ss_pred eeeeeeEEEEec
Q 011722 223 CRLDSWHAVIQM 234 (479)
Q Consensus 223 ~~iD~~~i~~~~ 234 (479)
..+-.-.|..++
T Consensus 169 ~wv~r~rir~tv 180 (395)
T KOG4180|consen 169 EWVLRQRIRGTV 180 (395)
T ss_pred HHhhhheeEEEE
Confidence 666555555544
No 49
>PF10254 Pacs-1: PACS-1 cytosolic sorting protein; InterPro: IPR019381 PACS-1 is a cytosolic sorting protein that directs the localisation of membrane proteins in the trans-Golgi network (TGN)/endosomal system. PACS-1 connects the clathrin adaptor AP-1 to acidic cluster sorting motifs contained in the cytoplasmic domain of cargo proteins such as furin, the cation-independent mannose-6-phosphate receptor and in viral proteins such as human immunodeficiency virus type 1 Nef [].
Probab=81.16 E-value=4.1 Score=43.01 Aligned_cols=50 Identities=26% Similarity=0.365 Sum_probs=37.2
Q ss_pred ccEEEEEcCchhHHHHHHHHhhccccCC---CCCCcEEeecCCCccccccccCC
Q 011722 148 KMRIVVAGGDGTVGWVLGSVGELNKQGR---EPVPPVAIIPLGTGNDLSRSFGW 198 (479)
Q Consensus 148 ~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~---~~~~plgiIPlGTgNDfArslg~ 198 (479)
...|+++|||-=++.||....+.=.... ..-.-+-|||+|+ |.+||.||-
T Consensus 76 ~vKV~v~G~~~y~~~VLr~yVE~Ls~K~~dWl~~~rFlvIPlGs-~~varyLgs 128 (414)
T PF10254_consen 76 PVKVAVAGGQSYLSAVLRAYVEQLSHKPPDWLNYLRFLVIPLGS-HPVARYLGS 128 (414)
T ss_pred ceEEEEEccHHHHHHHHHHHHHHhccCCcccccceeEEEecCCC-CHHHHHHhc
Confidence 5689999999999999998766321000 1123488999999 999999963
No 50
>cd08197 DOIS 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-Deoxystreptamine (DOS)-containing aminoglycoside antibiotics includes neomycin, kanamycin, gentamicin, and ribostamycin. They are important antibacterial agents. DOIS is a homologue of the dehydroquinate synthase which catalyzes the cyclization of 3-deoxy-D-arabino-heputulosonate-7-phosphate to dehydroquinate (DHQ) in the shikimate pathway.
Probab=81.04 E-value=5.2 Score=41.59 Aligned_cols=96 Identities=23% Similarity=0.250 Sum_probs=53.4
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEEe---ecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcC
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSE---VKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG 156 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~~---~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GG 156 (479)
++++|+..+... ....+.+.+.|..... +.+.. ..+.+ .....+++++.+.+ ......+.||++||
T Consensus 24 ~rvlvVtd~~v~----~~~~~~l~~~L~~~g~~~~~~~~~~~e~~k----~~~~v~~~~~~~~~--~~~dr~~~IIAvGG 93 (355)
T cd08197 24 DKYLLVTDSNVE----DLYGHRLLEYLREAGAPVELLSVPSGEEHK----TLSTLSDLVERALA--LGATRRSVIVALGG 93 (355)
T ss_pred CeEEEEECccHH----HHHHHHHHHHHHhcCCceEEEEeCCCCCCC----CHHHHHHHHHHHHH--cCCCCCcEEEEECC
Confidence 678888876532 2255667777764321 22221 11211 22334444433321 01223357888887
Q ss_pred chhHHHHHHHHhhccccCCCCCCcEEeecC--CCccc
Q 011722 157 DGTVGWVLGSVGELNKQGREPVPPVAIIPL--GTGND 191 (479)
Q Consensus 157 DGTv~~Vl~~l~~~~~~~~~~~~plgiIPl--GTgND 191 (479)
|++..++..+.... ....|+..||. |++.|
T Consensus 94 -Gsv~D~ak~~A~~~----~rgip~I~IPTTlla~~d 125 (355)
T cd08197 94 -GVVGNIAGLLAALL----FRGIRLVHIPTTLLAQSD 125 (355)
T ss_pred -cHHHHHHHHHHHHh----ccCCCEEEecCccccccc
Confidence 99999998775421 14679999998 56666
No 51
>cd08172 GlyDH-like1 Glycerol dehydrogenases-like. Glycerol dehydrogenases-like. The proteins in this family have not been characterized, but they show sequence homology with glycerol dehydrogenase. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=80.23 E-value=9.1 Score=39.46 Aligned_cols=91 Identities=20% Similarity=0.134 Sum_probs=57.6
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEee--cCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEV--KPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~--~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
++++|+..+.+ ...+.+.+.+.|... ...+... .|+ ....+++++.+. ..+.|.||++|| |
T Consensus 24 ~~~liv~d~~~----~~~~~~~l~~~L~~~-~~~~~~~~~~p~------~~~v~~~~~~~~-----~~~~D~iIavGG-G 86 (347)
T cd08172 24 KRPLIVTGPRS----WAAAKPYLPESLAAG-EAFVLRYDGECS------EENIERLAAQAK-----ENGADVIIGIGG-G 86 (347)
T ss_pred CeEEEEECHHH----HHHHHHHHHHHHhcC-eEEEEEeCCCCC------HHHHHHHHHHHH-----hcCCCEEEEeCC-c
Confidence 68888888776 235677777777432 2222211 122 234455544332 235689999998 9
Q ss_pred hHHHHHHHHhhccccCCCCCCcEEeecC--CCcccccc
Q 011722 159 TVGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDLSR 194 (479)
Q Consensus 159 Tv~~Vl~~l~~~~~~~~~~~~plgiIPl--GTgNDfAr 194 (479)
++..+...+... ..+|+..||. |||-..++
T Consensus 87 s~~D~aK~ia~~------~~~p~i~VPTT~gtgse~t~ 118 (347)
T cd08172 87 KVLDTAKAVADR------LGVPVITVPTLAATCAAWTP 118 (347)
T ss_pred HHHHHHHHHHHH------hCCCEEEecCccccCcccce
Confidence 999999888653 3578999997 67666554
No 52
>cd08186 Fe-ADH8 Iron-containing alcohol dehydrogenase. Type III Iron-containing alcohol dehydrogenases (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. The ADH of hyperthermophilic archaeon Thermococcus hydrothermalis oxidizes a series of primary aliphatic and aromatic alcohols preferentially from C2 to C8 but is also active towards methanol and glycerol and stereospecific for monoterpenes. It was suggested that the type III ADHs in microorganisms are involved in acetaldehyde detoxication rather than in alcohol turnover.
Probab=78.89 E-value=8.8 Score=40.20 Aligned_cols=106 Identities=18% Similarity=0.274 Sum_probs=58.4
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEE-EeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCc
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDL-SEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl-~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGD 157 (479)
.++++|+..+.+-... ..++++...|....+ +.+ ....|.. ......++++.+. ..+.|.||++||
T Consensus 26 ~kr~livtd~~~~~~~--g~~~~v~~~L~~~gi~~~~f~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIaiGG- 93 (383)
T cd08186 26 ISKVLLVTGKSAYKKS--GAWDKVEPALDEHGIEYVLYNKVTPNP----TVDQVDEAAKLGR-----EFGAQAVIAIGG- 93 (383)
T ss_pred CCEEEEEcCccHHhhc--ChHHHHHHHHHHcCCeEEEeCCCCCCC----CHHHHHHHHHHHH-----HcCCCEEEEeCC-
Confidence 3688888877665332 245566666654321 211 1122222 1233444443332 235689999999
Q ss_pred hhHHHHHHHHhhcccc-------------CCCCCCcEEeecC--CCccccccccC
Q 011722 158 GTVGWVLGSVGELNKQ-------------GREPVPPVAIIPL--GTGNDLSRSFG 197 (479)
Q Consensus 158 GTv~~Vl~~l~~~~~~-------------~~~~~~plgiIPl--GTgNDfArslg 197 (479)
|++..+...+.-.-.. .....+|+..||. |||....+.--
T Consensus 94 GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~P~iaIPTTagTGSE~t~~av 148 (383)
T cd08186 94 GSPIDSAKSAAILLEHPGKTARDLYEFKFTPEKALPLIAINLTHGTGTEVDRFAV 148 (383)
T ss_pred ccHHHHHHHHHHHHhCCCCcHHHHhCCCcccCCCCCEEEEeCCChhhhhhCCeEE
Confidence 8888877665331100 0123578999997 88877665443
No 53
>cd08180 PDD 1,3-propanediol dehydrogenase (PPD) catalyzes the reduction of 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol in glycerol metabolism. 1,3-propanediol dehydrogenase (PPD) plays a role in glycerol metabolism of some bacteria in anaerobic conditions. In this degradation pathway, glycerol is converted in a two-step process to 1,3-propanediol (1,3-PD) which is then excreted into the extracellular medium. The first reaction involves the transformation of glycerol into 3-hydroxypropionaldehyde (3-HPA) by a coenzyme B-12-dependent dehydratase. The second reaction involves the dismutation of the 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol by the NADH-linked 1,3-propanediol dehydrogenase (PPD). The enzyme require iron ion for its function. Because many genes in this pathway are present in the pdu (propanediol utilisation) operon, they are also named pdu genes. PPD is a member of the iron-containing alcohol dehydrogenase superfamily. The PPD structure has a dehydroquinat
Probab=78.60 E-value=8.7 Score=39.34 Aligned_cols=101 Identities=16% Similarity=0.234 Sum_probs=52.6
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhc-CeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchh
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKE-QVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~-qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGT 159 (479)
++++|+..+..... .+.+++.+.|... .........+.. .....++.++.+ + ..+.|.||++|| |+
T Consensus 23 ~~~lvv~~~~~~~~---g~~~~v~~~l~~~~~~~~~~~v~~~p----~~~~v~~~~~~~----~-~~~~d~IiaiGG-Gs 89 (332)
T cd08180 23 KRVLIVTDPFMVKS---GMLDKVTDHLDSSIEVEIFSDVVPDP----PIEVVAKGIKKF----L-DFKPDIVIALGG-GS 89 (332)
T ss_pred CeEEEEeCchhhhC---ccHHHHHHHHHhcCcEEEeCCCCCCc----CHHHHHHHHHHH----H-hcCCCEEEEECC-ch
Confidence 67888887644321 2445555555432 111111222222 123334444332 2 245789999999 77
Q ss_pred HHHHHHHHhhcccc-CCCCCCcEEeecC--CCcccccc
Q 011722 160 VGWVLGSVGELNKQ-GREPVPPVAIIPL--GTGNDLSR 194 (479)
Q Consensus 160 v~~Vl~~l~~~~~~-~~~~~~plgiIPl--GTgNDfAr 194 (479)
+..++..+.-.... ......|+..||. |||--...
T Consensus 90 ~~D~aKa~a~~~~~~~~~~~~p~i~VPTtagtgse~t~ 127 (332)
T cd08180 90 AIDAAKAIIYFAKKLGKKKKPLFIAIPTTSGTGSEVTS 127 (332)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCEEEeCCCCcchHhhCC
Confidence 77777654321100 1124579999996 77755443
No 54
>cd07766 DHQ_Fe-ADH Dehydroquinate synthase-like (DHQ-like) and iron-containing alcohol dehydrogenases (Fe-ADH). Dehydroquinate synthase-like. This superfamily divides into two subgroups: the dehydroquinate synthase-like, and a large metal-containing alcohol dehydrogenases (ADH), known as iron-containing alcohol dehydrogenases. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. Dehydroquinate synthase-like group includes dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase. The alcohol dehydrogenases in this superfamily contain a dehydroquinate synthase-like protein structural fold and mostly contain iron. They are distinct from other alc
Probab=77.56 E-value=7.7 Score=39.56 Aligned_cols=92 Identities=18% Similarity=0.233 Sum_probs=53.7
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhc-CeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKE-QVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~-qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
.++++|+..+..-. ...+++.+.|... ....+....|.. .....+++++.+. ..+.|.||++|| |
T Consensus 23 ~~~~liv~~~~~~~----~~~~~v~~~l~~~~~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIaiGG-G 88 (332)
T cd07766 23 FDRALVVSDEGVVK----GVGEKVADSLKKLIAVHIFDGVGPNP----TFEEVKEAVERAR-----AAEVDAVIAVGG-G 88 (332)
T ss_pred CCeEEEEeCCchhh----hHHHHHHHHHHhcCcEEEeCCcCCCc----CHHHHHHHHHHHH-----hcCcCEEEEeCC-c
Confidence 36788888765543 3556666666542 111111222211 2234455554432 145788999988 8
Q ss_pred hHHHHHHHHhhccccCCCCCCcEEeecC--CCc
Q 011722 159 TVGWVLGSVGELNKQGREPVPPVAIIPL--GTG 189 (479)
Q Consensus 159 Tv~~Vl~~l~~~~~~~~~~~~plgiIPl--GTg 189 (479)
++..++..+.... ...+|+..||. |||
T Consensus 89 s~~D~aK~ia~~~----~~~~p~i~iPTt~~tg 117 (332)
T cd07766 89 STLDTAKAVAALL----NRGLPIIIVPTTAATG 117 (332)
T ss_pred hHHHHHHHHHHHh----cCCCCEEEEeCCCchh
Confidence 9999998875531 13689999997 555
No 55
>cd08170 GlyDH Glycerol dehydrogenases (GlyDH) catalyzes oxidation of glycerol to dihydroxyacetone in glycerol dissmilation. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway . In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=77.26 E-value=10 Score=39.05 Aligned_cols=94 Identities=17% Similarity=0.196 Sum_probs=55.8
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchh
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGT 159 (479)
++++|+.-+.+. ..+.+++...|....+ +......+.. ......+.++.+ + ..+.|.||++|| |+
T Consensus 23 ~r~livt~~~~~----~~~~~~v~~~L~~~~i~~~~~~~~~~p----~~~~v~~~~~~~----~-~~~~D~IIavGG-GS 88 (351)
T cd08170 23 KRALIIADEFVL----DLVGAKIEESLAAAGIDARFEVFGGEC----TRAEIERLAEIA----R-DNGADVVIGIGG-GK 88 (351)
T ss_pred CeEEEEECHHHH----HHHHHHHHHHHHhCCCeEEEEEeCCcC----CHHHHHHHHHHH----h-hcCCCEEEEecC-ch
Confidence 677777633332 2467777777765432 2122222222 113344444332 2 246789999999 88
Q ss_pred HHHHHHHHhhccccCCCCCCcEEeecC--CCcccccc
Q 011722 160 VGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDLSR 194 (479)
Q Consensus 160 v~~Vl~~l~~~~~~~~~~~~plgiIPl--GTgNDfAr 194 (479)
+..++..+.-. ...|+..||. |||--...
T Consensus 89 ~iD~aK~ia~~------~~~P~iaIPTTagTgse~t~ 119 (351)
T cd08170 89 TLDTAKAVADY------LGAPVVIVPTIASTDAPTSA 119 (351)
T ss_pred hhHHHHHHHHH------cCCCEEEeCCccccCccccc
Confidence 88888877643 3578999997 67765554
No 56
>PRK09423 gldA glycerol dehydrogenase; Provisional
Probab=76.57 E-value=17 Score=37.75 Aligned_cols=94 Identities=14% Similarity=0.140 Sum_probs=55.8
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchh
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGT 159 (479)
++++||.-+..- ....+++...|..... +......+.. .....+++++.+ + ..+.|.||++|| |+
T Consensus 30 ~~~livtd~~~~----~~~~~~v~~~l~~~~~~~~~~~~~~ep----~~~~v~~~~~~~----~-~~~~d~IIavGG-Gs 95 (366)
T PRK09423 30 KRALVIADEFVL----GIVGDRVEASLKEAGLTVVFEVFNGEC----SDNEIDRLVAIA----E-ENGCDVVIGIGG-GK 95 (366)
T ss_pred CEEEEEEChhHH----HHHHHHHHHHHHhCCCeEEEEEeCCCC----CHHHHHHHHHHH----H-hcCCCEEEEecC-hH
Confidence 678888754442 2366777777765431 2111222222 113444444333 2 235689999999 89
Q ss_pred HHHHHHHHhhccccCCCCCCcEEeecC--CCcccccc
Q 011722 160 VGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDLSR 194 (479)
Q Consensus 160 v~~Vl~~l~~~~~~~~~~~~plgiIPl--GTgNDfAr 194 (479)
+..+...+.-. ..+|+..||. |||-....
T Consensus 96 v~D~aK~iA~~------~~~p~i~IPTtagtgSe~t~ 126 (366)
T PRK09423 96 TLDTAKAVADY------LGVPVVIVPTIASTDAPTSA 126 (366)
T ss_pred HHHHHHHHHHH------cCCCEEEeCCccccCccccC
Confidence 99998887643 3578999997 55554443
No 57
>cd08194 Fe-ADH6 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Proteins of this family have not been characterized. Their specific function is unknown. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions.
Probab=76.45 E-value=9.4 Score=39.84 Aligned_cols=101 Identities=20% Similarity=0.262 Sum_probs=54.7
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eE-EEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FD-LSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~d-l~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
++++|+..+.+-. . ...+++...|.+..+ +. +....+.. .....+++++.+. ..+.|.||++|| |
T Consensus 24 ~r~livt~~~~~~-~--g~~~~v~~~L~~~gi~~~~~~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIaiGG-G 90 (375)
T cd08194 24 KRPLIVTDKVMVK-L--GLVDKLTDSLKKEGIESAIFDDVVSEP----TDESVEEGVKLAK-----EGGCDVIIALGG-G 90 (375)
T ss_pred CeEEEEcCcchhh-c--chHHHHHHHHHHCCCeEEEECCCCCCc----CHHHHHHHHHHHH-----hcCCCEEEEeCC-c
Confidence 5788888765542 1 255667777765431 22 11222222 1233444444332 246789999999 7
Q ss_pred hHHHHHHHHhhcc------------ccCCCCCCcEEeecC--CCcccccc
Q 011722 159 TVGWVLGSVGELN------------KQGREPVPPVAIIPL--GTGNDLSR 194 (479)
Q Consensus 159 Tv~~Vl~~l~~~~------------~~~~~~~~plgiIPl--GTgNDfAr 194 (479)
++..++..+.-.- ........|+..||. |||--..+
T Consensus 91 S~~D~AKaia~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTtagtGsE~t~ 140 (375)
T cd08194 91 SPIDTAKAIAVLATNGGSIRDYKGPRIVDKPGLPLIAIPTTAGTGSEVTR 140 (375)
T ss_pred hHHHHHHHHHHHHhCCCCHHHHhCcccccCCCCCEEEECCCCccccccCC
Confidence 8888776653110 000124578999997 66665543
No 58
>cd08171 GlyDH-like2 Glycerol dehydrogenase-like. Glycerol dehydrogenases-like. The proteins in this family have not been characterized, but they show sequence homology with glycerol dehydrogenase. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=76.24 E-value=6.2 Score=40.67 Aligned_cols=93 Identities=14% Similarity=0.171 Sum_probs=54.9
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-e-EEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~-dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
++++||..+.+- ....+++.+.|+...+ + .+....+.. .....+++++.+ + ..+.|.||++|| |
T Consensus 23 ~r~liv~d~~~~----~~~~~~v~~~l~~~~~~~~~~~~~~~~p----~~~~v~~~~~~~----~-~~~~d~iiavGG-G 88 (345)
T cd08171 23 KKVVVIGGKTAL----AAAKDKIKAALEQSGIEITDFIWYGGES----TYENVERLKKNP----A-VQEADMIFAVGG-G 88 (345)
T ss_pred CEEEEEeCHHHH----HHHHHHHHHHHHHCCCeEEEEEecCCCC----CHHHHHHHHHHH----h-hcCCCEEEEeCC-c
Confidence 678888765443 2356777777765432 1 122222222 123334444332 2 246789999999 8
Q ss_pred hHHHHHHHHhhccccCCCCCCcEEeecC--CCccccc
Q 011722 159 TVGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDLS 193 (479)
Q Consensus 159 Tv~~Vl~~l~~~~~~~~~~~~plgiIPl--GTgNDfA 193 (479)
++..+...+... ...|+..||. |||--..
T Consensus 89 s~~D~aK~ia~~------~~~p~i~VPTt~gtgse~t 119 (345)
T cd08171 89 KAIDTVKVLADK------LGKPVFTFPTIASNCAAVT 119 (345)
T ss_pred HHHHHHHHHHHH------cCCCEEEecCccccCcccc
Confidence 999999887653 3578999997 5554333
No 59
>cd08181 PPD-like 1,3-propanediol dehydrogenase-like (PPD). 1,3-propanediol dehydrogenase-like (PPD). This family is a member of the iron-containing alcohol dehydrogenase superfamily, and exhibits a dehydroquinate synthase-like fold. Protein sequence similarity search and other biochemical evidences suggest that they are close to the iron-containing 1,3-propanediol dehydrogenase (EC 1.1.1.202). 1,3-propanediol dehydrogenase catalyzes the oxidation of propane-1,3-diol to 3-hydroxypropanal with the simultaneous reduction of NADP+ to NADPH. The protein structure of Thermotoga maritima TM0920 gene contains one NADP+ and one iron ion.
Probab=76.12 E-value=11 Score=39.13 Aligned_cols=104 Identities=16% Similarity=0.284 Sum_probs=57.4
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEE-EeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDL-SEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl-~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
++++|+.-+.+-...+ ..+++...|....+ +.+ ....|.. ......++++.+. ..+.|.||++|| |
T Consensus 26 ~r~lvVt~~~~~~~~g--~~~~v~~~L~~~g~~~~~~~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-G 93 (357)
T cd08181 26 KRALIVTGKSSAKKNG--SLDDVTKALEELGIEYEIFDEVEENP----SLETIMEAVEIAK-----KFNADFVIGIGG-G 93 (357)
T ss_pred CEEEEEeCCchHhhcC--cHHHHHHHHHHcCCeEEEeCCCCCCc----CHHHHHHHHHHHH-----hcCCCEEEEeCC-c
Confidence 6888888776643332 34556666654321 221 1222222 1133444444332 245689999999 8
Q ss_pred hHHHHHHHHhhcc-----------ccCCCCCCcEEeecC--CCcccccccc
Q 011722 159 TVGWVLGSVGELN-----------KQGREPVPPVAIIPL--GTGNDLSRSF 196 (479)
Q Consensus 159 Tv~~Vl~~l~~~~-----------~~~~~~~~plgiIPl--GTgNDfArsl 196 (479)
++..++..+.-.- .......+|+..||. |||....+.-
T Consensus 94 SviD~aK~ia~~~~~~~~~~~~~~~~~~~~~~P~i~VPTtagTGsE~t~~a 144 (357)
T cd08181 94 SPLDAAKAIAVLIKNPDLKVELYFRSKYLKALPVVAIPTTAGTGSEVTQYS 144 (357)
T ss_pred hHHHHHHHHHHHHhCCCcHHHHhcccccCCCCCEEEEeCCCcchhhhCCeE
Confidence 8888877553210 000124578999997 8888777643
No 60
>cd08550 GlyDH-like Glycerol_dehydrogenase-like. Families of proteins related to glycerol dehydrogenases. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site. Some subfamilies have not been characterized till now.
Probab=75.84 E-value=13 Score=38.25 Aligned_cols=94 Identities=16% Similarity=0.124 Sum_probs=55.7
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchh
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGT 159 (479)
++++|+..+.+-. ...+++...|....+ +++....+.. .....+++++.+ + ..+.|.||++|| |+
T Consensus 23 ~~~liv~~~~~~~----~~~~~v~~~l~~~~i~~~~~~~~~~p----~~~~v~~~~~~~----~-~~~~d~IIavGG-Gs 88 (349)
T cd08550 23 SKVAVVGGKTVLK----KSRPRFEAALAKSIIVVDVIVFGGEC----STEEVVKALCGA----E-EQEADVIIGVGG-GK 88 (349)
T ss_pred CeEEEEEChHHHH----HHHHHHHHHHHhcCCeeEEEEcCCCC----CHHHHHHHHHHH----H-hcCCCEEEEecC-cH
Confidence 5677777655532 355677777765432 2232222111 113344444333 2 235789999998 89
Q ss_pred HHHHHHHHhhccccCCCCCCcEEeecC--CCcccccc
Q 011722 160 VGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDLSR 194 (479)
Q Consensus 160 v~~Vl~~l~~~~~~~~~~~~plgiIPl--GTgNDfAr 194 (479)
+..+...+... ...|+..||. |||-...+
T Consensus 89 ~~D~aK~ia~~------~~~p~i~VPTtagtgse~t~ 119 (349)
T cd08550 89 TLDTAKAVADR------LDKPIVIVPTIASTCAASSN 119 (349)
T ss_pred HHHHHHHHHHH------cCCCEEEeCCccccCccccc
Confidence 99999888653 3578999997 66655444
No 61
>TIGR03405 Phn_Fe-ADH phosphonate metabolism-associated iron-containing alcohol dehydrogenase. 2-hydroxyethylphosphonate (2-HEP), the presumed product of the reaction of Pald with an alcohol dehydrogenase, is a biologically novel but reasonable analog of 2-AEP and may be a constituent of as-yet undescribed natural products. In the case of Azoarcus, downstream of the dehydrogenase is a CDP-glycerol:glycerophosphate transferase homolog that may indicate the existence of a pathway for 2-HEP-derived phosphonolipid biosynthesis.
Probab=75.29 E-value=19 Score=37.36 Aligned_cols=105 Identities=22% Similarity=0.225 Sum_probs=56.0
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhH
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv 160 (479)
++++|+..+.... ..+.+++...|.....+-+....|.. .....++.++.+.+ .....|.||++|| |++
T Consensus 24 ~r~lvVtd~~~~~---~g~~~~v~~~L~~~~~~~~~~v~~~p----t~~~v~~~~~~~~~---~~~~~D~IIaiGG-GSv 92 (355)
T TIGR03405 24 RRVVVVTFPEARA---LGLARRLEALLGGRLAALIDDVAPNP----DVAQLDGLYARLWG---DEGACDLVIALGG-GSV 92 (355)
T ss_pred CeEEEEECcchhh---cchHHHHHHHhccCcEEEeCCCCCCc----CHHHHHHHHHHHHh---cCCCCCEEEEeCC-ccH
Confidence 6888888764422 13556677766543222222233332 12334444433221 0123789999999 888
Q ss_pred HHHHHHHhhc--ccc--------------CCCCCCcEEeecC--CCcccccccc
Q 011722 161 GWVLGSVGEL--NKQ--------------GREPVPPVAIIPL--GTGNDLSRSF 196 (479)
Q Consensus 161 ~~Vl~~l~~~--~~~--------------~~~~~~plgiIPl--GTgNDfArsl 196 (479)
..+...+.-. +.. .....+|+..||. |||-...+.-
T Consensus 93 iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~P~IaVPTTagTGSE~t~~a 146 (355)
T TIGR03405 93 IDTAKVLAVGLRRGEFDLLLQLLRNGRDFAPTARLPLVAIPTTAGTGSEVTPWA 146 (355)
T ss_pred HHHHHHHHHHHhCCCcccHHHHHhcCCccCCCCCCCEEEEcCCCcchhhhcCeE
Confidence 8777664322 000 0124578999997 7887666543
No 62
>cd08169 DHQ-like Dehydroquinate synthase-like which includes dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase. Dehydroquinate synthase-like. This group contains dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase. They exhibit the dehydroquinate synthase structural fold. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-Deoxystreptamine (DOS)-containing aminoglycoside antibiotics includes ne
Probab=75.06 E-value=11 Score=38.95 Aligned_cols=99 Identities=15% Similarity=0.141 Sum_probs=55.4
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhh-cC--eeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcC
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGK-EQ--VFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG 156 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~-~q--v~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GG 156 (479)
.++++|+..+..-. ...+++.+.|.. .. .+-+....+.+ ....++++.+.+.+. .....+.||++||
T Consensus 23 ~~k~livtd~~v~~----~~~~~v~~~L~~~~~~~~~~~~~~e~~k----~~~~v~~~~~~~~~~--~~~r~d~IIaiGG 92 (344)
T cd08169 23 FDQYFFISDSGVAD----LIAHYIAEYLSKILPVHILVIEGGEEYK----TFETVTRILERAIAL--GANRRTAIVAVGG 92 (344)
T ss_pred CCeEEEEECccHHH----HHHHHHHHHHHhhcCceEEEeCCCCCCC----CHHHHHHHHHHHHHc--CCCCCcEEEEECC
Confidence 36788887755432 355666676654 22 12122112211 223445544333211 1234678888887
Q ss_pred chhHHHHHHHHhhccccCCCCCCcEEeecC--CCccccc
Q 011722 157 DGTVGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDLS 193 (479)
Q Consensus 157 DGTv~~Vl~~l~~~~~~~~~~~~plgiIPl--GTgNDfA 193 (479)
|++..++..+.... ....|+-.||. ++++|-+
T Consensus 93 -Gsv~D~ak~vA~~~----~rgip~i~VPTTlla~~ds~ 126 (344)
T cd08169 93 -GATGDVAGFVASTL----FRGIAFIRVPTTLLAQSDSG 126 (344)
T ss_pred -cHHHHHHHHHHHHh----ccCCcEEEecCCcccccccC
Confidence 89999988775431 14679999998 5666643
No 63
>cd08551 Fe-ADH iron-containing alcohol dehydrogenases (Fe-ADH)-like. Large metal-containing alcohol dehydrogenases (ADH), known as iron-containing alcohol dehydrogenases. They contain a dehydroquinate synthase-like protein structural fold and mostly contain iron. They are distinct from other alcohol dehydrogenases which contains different protein domains. There are several distinct families of alcohol dehydrogenases: Zinc-containing long-chain alcohol dehydrogenases; insect-type, or short-chain alcohol dehydrogenases; iron-containing alcohol dehydrogenases, and others. The iron-containing family has a Rossmann fold-like topology that resembles the fold of the zinc-dependent alcohol dehydrogenases, but lacks sequence homology, and differs in strand arrangement. ADH catalyzes the reversible oxidation of alcohol to acetaldehyde with the simultaneous reduction of NAD(P)+ to NAD(P)H.
Probab=74.96 E-value=9.7 Score=39.55 Aligned_cols=104 Identities=14% Similarity=0.229 Sum_probs=56.0
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eE-EEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCc
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FD-LSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~d-l~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGD 157 (479)
.++++|+.-+.+-. ....+++.+.|..... +. +....+.. .....+++++++. ..+.|.||++||
T Consensus 23 ~~~~lvv~~~~~~~---~~~~~~v~~~L~~~~~~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IiaiGG- 89 (370)
T cd08551 23 GRKALIVTDPGLVK---TGVLDKVIDSLKEAGIEVVIFDGVEPNP----TLSNVDAAVAAYR-----EEGCDGVIAVGG- 89 (370)
T ss_pred CCeEEEEeCcchhh---CccHHHHHHHHHHcCCeEEEECCCCCCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC-
Confidence 36788888766654 1355566666654321 21 11122211 1234455544432 235689999999
Q ss_pred hhHHHHHHHHhhccc------------cCCCCCCcEEeecC--CCcccccccc
Q 011722 158 GTVGWVLGSVGELNK------------QGREPVPPVAIIPL--GTGNDLSRSF 196 (479)
Q Consensus 158 GTv~~Vl~~l~~~~~------------~~~~~~~plgiIPl--GTgNDfArsl 196 (479)
|++..++..+.-.-. .......|+..||. |||--..+..
T Consensus 90 Gs~~D~AK~va~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTt~gtgse~t~~a 142 (370)
T cd08551 90 GSVLDTAKAIALLATNPGDIWDYEGGKPVIKPALPLIAIPTTAGTGSEVTPFA 142 (370)
T ss_pred chHHHHHHHHHHHHhCCCcHHHHhCcccccCCCCCEEEecCCCcchhhcCCeE
Confidence 788877766533210 00123578999998 6775554443
No 64
>cd08187 BDH Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. The butanol dehydrogenase (BDH) is involved in the final step of the butanol formation pathway in anaerobic micro-organism. Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. Activity in the reverse direction was 50-fold lower than that in the forward direction. The NADH-BDH had higher activity with longer chained aldehydes and was inhibited by metabolites containing an adenine moiety. This protein family belongs to the so-called iron-containing alcohol dehydrogenase superfamily. Since members of this superfamily use different divalent ions, preferentially iron or zinc, it has been suggested to be renamed to family III metal-dependent polyol dehydrogenases.
Probab=74.46 E-value=13 Score=38.93 Aligned_cols=105 Identities=20% Similarity=0.246 Sum_probs=56.8
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-e-EEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~-dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
++++|+.-+.+.... .+++++.+.|..... + .+....|.. ......+.++.+ + ..+.|.||++|| |
T Consensus 29 ~r~livt~~~~~~~~--~~~~~v~~~L~~~g~~~~~~~~v~~~p----~~~~v~~~~~~~----~-~~~~D~IIaiGG-G 96 (382)
T cd08187 29 KKVLLVYGGGSIKKN--GLYDRVIASLKEAGIEVVELGGVEPNP----RLETVREGIELC----K-EEKVDFILAVGG-G 96 (382)
T ss_pred CEEEEEeCCcHHHhc--CcHHHHHHHHHHcCCeEEEECCccCCC----CHHHHHHHHHHH----H-HcCCCEEEEeCC-h
Confidence 678888766555322 245667777765321 1 122222222 112333333322 2 246789999999 8
Q ss_pred hHHHHHHHHhhcc------------ccCCCCCCcEEeecC--CCccccccccC
Q 011722 159 TVGWVLGSVGELN------------KQGREPVPPVAIIPL--GTGNDLSRSFG 197 (479)
Q Consensus 159 Tv~~Vl~~l~~~~------------~~~~~~~~plgiIPl--GTgNDfArslg 197 (479)
++..++..+.-.- .......+|+-.||. |||-...+.--
T Consensus 97 S~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~P~iaIPTTagTGsE~t~~av 149 (382)
T cd08187 97 SVIDSAKAIAAGAPYDGDVWDFFTGKAKIEKALPVGTVLTLAATGSEMNGGAV 149 (382)
T ss_pred HHHHHHHHHHhHhhCCCCHHHHhcccCCCCCCCCEEEEeCCCchhhccCCCEE
Confidence 8888776653210 000124578999996 78766665443
No 65
>cd08173 Gro1PDH Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH) catalyzes the reversible conversion between dihydroxyacetone phosphate and glycerol-1-phosphate using either NADH or NADPH as a coenzyme. Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH, EC 1.1.1.261) plays an important role in the formation of the enantiomeric configuration of the glycerophosphate backbone (sn-glycerol-1-phosphate) of archaeal ether lipids. It catalyzes the reversible conversion between dihydroxyacetone phosphate and glycerol-1-phosphate using either NADH or NADPH as a coenzyme. The activity is zinc-dependent. One characteristic feature of archaea is that their cellular membrane has an ether linkage between the glycerol backbone and the hydrocarbon residues. The polar lipids of the members of Archaea consist of di- and tetraethers of glycerol with isoprenoid alcohols bound at the sn-2 and sn-3 positions of the glycerol moiety. The archaeal polar lipids have the enantiomeric configuration of a glycerophosph
Probab=73.17 E-value=22 Score=36.45 Aligned_cols=88 Identities=15% Similarity=0.148 Sum_probs=54.5
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhH
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv 160 (479)
++++|+..+.... ...+++...|.....+.+. ..|.. .....+++.+++. ..+.+.||++|| |++
T Consensus 26 ~~~liv~d~~~~~----~~~~~v~~~l~~~~~~~~~-~~~~~----~~~~v~~~~~~~~-----~~~~d~iIaiGG-Gs~ 90 (339)
T cd08173 26 GRVLVVTGPTTKS----IAGKKVEALLEDEGEVDVV-IVEDA----TYEEVEKVESSAR-----DIGADFVIGVGG-GRV 90 (339)
T ss_pred CeEEEEECCchHH----HHHHHHHHHHHhcCCeEEE-EeCCC----CHHHHHHHHHHhh-----hcCCCEEEEeCC-chH
Confidence 6788888765532 3667777777654212221 22222 2244555554432 135689999998 999
Q ss_pred HHHHHHHhhccccCCCCCCcEEeecCCCc
Q 011722 161 GWVLGSVGELNKQGREPVPPVAIIPLGTG 189 (479)
Q Consensus 161 ~~Vl~~l~~~~~~~~~~~~plgiIPlGTg 189 (479)
..++..+.-. ..+|+..||.=.+
T Consensus 91 ~D~aK~~a~~------~~~p~i~iPTT~~ 113 (339)
T cd08173 91 IDVAKVAAYK------LGIPFISVPTAAS 113 (339)
T ss_pred HHHHHHHHHh------cCCCEEEecCccc
Confidence 9999888643 4679999997444
No 66
>cd08176 LPO Lactadehyde:propanediol oxidoreductase (LPO) catalyzes the interconversion between L-lactaldehyde and L-1,2-propanediol in Escherichia coli and other enterobacteria. Lactadehyde:propanediol oxidoreductase (LPO) is a member of the group III iron-activated dehydrogenases which catalyze the interconversion between L-lactaldehyde and L-1,2-propanediol in Escherichia coli and other enterobacteria. L-Fucose and L-rhamnose is used by Escherichia coli through an inducible pathway mediated by the fucose regulon comprising four linked oeprons fucO, fucA, fucPIK, and fucR. The fucA-encoded aldolase catalyzes the formation of dihydroxyacetone phosphate and L-lactaldehyde. Under anaerobic conditions, with NADH as a cofactor, lactaldehyde is converted by a fucO-encoded Lactadehyde:propanediol oxidoreductase (LPO) to L-1,2-propanediol, which is excreted as a fermentation product. In mutant strains, E. coli adapted to grow on L-1,2-propanediol, FucO catalyzes the oxidation of the polyol to
Probab=71.46 E-value=12 Score=38.96 Aligned_cols=105 Identities=14% Similarity=0.264 Sum_probs=56.2
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEE-eecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLS-EVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~-~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
++++|+..+..-. ....++++..|....+ +.+. ...+.. .....+++++.+ + ..+.|.||++|| |
T Consensus 29 ~~~lvv~~~~~~~---~~~~~~v~~~L~~~~~~~~~f~~v~~~p----~~~~v~~~~~~~----~-~~~~D~IIavGG-G 95 (377)
T cd08176 29 KKALIVTDKGLVK---IGVVEKVTDVLDEAGIDYVIYDGVKPNP----TITNVKDGLAVF----K-KEGCDFIISIGG-G 95 (377)
T ss_pred CeEEEECCchHhh---cCcHHHHHHHHHHcCCeEEEeCCCCCCC----CHHHHHHHHHHH----H-hcCCCEEEEeCC-c
Confidence 5777776654432 1355666667754321 2211 122221 123344444433 2 246789999999 7
Q ss_pred hHHHHHHHHhhcc------------ccCCCCCCcEEeecC--CCccccccccCC
Q 011722 159 TVGWVLGSVGELN------------KQGREPVPPVAIIPL--GTGNDLSRSFGW 198 (479)
Q Consensus 159 Tv~~Vl~~l~~~~------------~~~~~~~~plgiIPl--GTgNDfArslg~ 198 (479)
++..++..+.-+- .......+|+..||. |||-...+..-+
T Consensus 96 S~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTtagTgSe~t~~avi 149 (377)
T cd08176 96 SPHDCAKAIGIVATNGGDIRDYEGVAKSKKPAVPIVAINTTAGTASEVTINYVI 149 (377)
T ss_pred HHHHHHHHHHHHHhCCCCHHHHhCcCccCCCCCCEEEeCCCCcchhccCCcEEE
Confidence 7777776553210 000124579999997 888777654443
No 67
>KOG2178 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=69.50 E-value=8.2 Score=40.33 Aligned_cols=60 Identities=33% Similarity=0.561 Sum_probs=41.9
Q ss_pred CccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCce
Q 011722 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPIC 223 (479)
Q Consensus 147 ~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~ 223 (479)
..|.||..||||||=-+..-+.+ ..||+--+-+|| ||+=..|+. +..++.+..+.+++..
T Consensus 168 ~~D~iItLGGDGTvL~aS~LFq~-------~VPPV~sFslGs-------lGFLtpf~f---~~f~~~l~~v~~~~~~ 227 (409)
T KOG2178|consen 168 RFDLIITLGGDGTVLYASSLFQR-------SVPPVLSFSLGS-------LGFLTPFPF---ANFQEQLARVLNGRAA 227 (409)
T ss_pred ceeEEEEecCCccEEEehhhhcC-------CCCCeEEeecCC-------ccccccccH---HHHHHHHHHHhcCcce
Confidence 35899999999999777765543 578887777774 565554443 3466677778888743
No 68
>cd08195 DHQS Dehydroquinate synthase (DHQS) catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway, which involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds, is found in bacteria, microbial eukaryotes, and plants, but not in mammals. Therefore, enzymes of this pathway are attractive targets for the development of non-toxic antimicrobial compounds, herbicides and anti-parasitic agents. The activity of DHQS requires nicotinamide adenine dinucleotide (NAD) as cofactor. A single active site in DHQS catalyzes five sequential reactions involving alcohol oxidation, phosphate elimination, carbonyl reduction, ring opening, and intramolecular aldol
Probab=68.70 E-value=16 Score=37.64 Aligned_cols=95 Identities=20% Similarity=0.202 Sum_probs=52.2
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
.++++|+..+..-. ...+++.+.|..... +.+......+ ........+++.+.+.+ ......+.||++|| |
T Consensus 24 ~~~~livtd~~~~~----~~~~~l~~~L~~~g~~~~~~~~~~~e-~~~~~~~v~~~~~~~~~--~~~~r~d~IIaiGG-G 95 (345)
T cd08195 24 GSKILIVTDENVAP----LYLEKLKAALEAAGFEVEVIVIPAGE-ASKSLETLEKLYDALLE--AGLDRKSLIIALGG-G 95 (345)
T ss_pred CCeEEEEECCchHH----HHHHHHHHHHHhcCCceEEEEeCCCC-CcCCHHHHHHHHHHHHH--cCCCCCCeEEEECC-h
Confidence 46888888866643 356677777765321 2221111111 01122344444433321 01233578888888 8
Q ss_pred hHHHHHHHHhhccccCCCCCCcEEeecC
Q 011722 159 TVGWVLGSVGELNKQGREPVPPVAIIPL 186 (479)
Q Consensus 159 Tv~~Vl~~l~~~~~~~~~~~~plgiIPl 186 (479)
++..++..+.... ...+|+..||.
T Consensus 96 sv~D~ak~vA~~~----~rgip~i~VPT 119 (345)
T cd08195 96 VVGDLAGFVAATY----MRGIDFIQIPT 119 (345)
T ss_pred HHHhHHHHHHHHH----hcCCCeEEcch
Confidence 9999987775321 24678888886
No 69
>cd08183 Fe-ADH2 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenases (Fe-ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and is a member of the iron-activated alcohol dehydrogenase-like family. They are distinct from other alcohol dehydrogenases which contains different protein domain. Proteins of this family have not been characterized. Their specific function is unknown. They are mainly found in bacteria.
Probab=68.61 E-value=31 Score=35.92 Aligned_cols=99 Identities=16% Similarity=0.195 Sum_probs=54.1
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchh
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGT 159 (479)
++++|+..+.+. ..+++...|....+ +.+....+.. .....++.++.+ + ..+.|.||++|| |+
T Consensus 23 ~r~livtd~~~~------~~~~v~~~L~~~g~~~~~~~~~~~p----~~~~v~~~~~~~----~-~~~~D~IIaiGG-GS 86 (374)
T cd08183 23 RRVLLVTGASSL------RAAWLIEALRAAGIEVTHVVVAGEP----SVELVDAAVAEA----R-NAGCDVVIAIGG-GS 86 (374)
T ss_pred CcEEEEECCchH------HHHHHHHHHHHcCCeEEEecCCCCc----CHHHHHHHHHHH----H-hcCCCEEEEecC-ch
Confidence 688888776553 55667777765321 2211122221 113344444332 2 246789999999 88
Q ss_pred HHHHHHHHhhccc-----------c-----CCCCCCcEEeecC--CCccccccc
Q 011722 160 VGWVLGSVGELNK-----------Q-----GREPVPPVAIIPL--GTGNDLSRS 195 (479)
Q Consensus 160 v~~Vl~~l~~~~~-----------~-----~~~~~~plgiIPl--GTgNDfArs 195 (479)
+..++..+.-.-. . .....+|+..||. |||.-..+.
T Consensus 87 ~~D~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTtagTGSE~t~~ 140 (374)
T cd08183 87 VIDAGKAIAALLPNPGSVLDYLEGVGRGLPLDGPPLPFIAIPTTAGTGSEVTKN 140 (374)
T ss_pred HHHHHHHHHHHHcCCCCHHHHHhccCccccCCCCCCCEEEecCCCchhHHhCCe
Confidence 8777766532100 0 0123578889996 677655543
No 70
>COG1454 EutG Alcohol dehydrogenase, class IV [Energy production and conversion]
Probab=68.35 E-value=28 Score=36.61 Aligned_cols=107 Identities=19% Similarity=0.306 Sum_probs=62.4
Q ss_pred CCCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEE-eecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcC
Q 011722 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLS-EVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG 156 (479)
Q Consensus 79 ~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~-~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GG 156 (479)
..++++|+--|.--+ ..+.+++.+.|....+ |.+- .+.|++-. ...++-++.. + ..+.|.||+.||
T Consensus 28 g~~r~liVTd~~~~~---~g~~~~v~~~L~~~~i~~~if~~v~p~P~~----~~v~~~~~~~----~-~~~~D~iIalGG 95 (377)
T COG1454 28 GAKRALIVTDRGLAK---LGLLDKVLDSLDAAGIEYEVFDEVEPEPTI----ETVEAGAEVA----R-EFGPDTIIALGG 95 (377)
T ss_pred CCCceEEEECCcccc---chhHHHHHHHHHhcCCeEEEecCCCCCCCH----HHHHHHHHHH----H-hcCCCEEEEeCC
Confidence 347888888776322 2477888888877651 2222 23343321 2233322222 2 246789999999
Q ss_pred chhHHHHHHHHhhcccc------------CCCCCCcEEeecC--CCccccccccCC
Q 011722 157 DGTVGWVLGSVGELNKQ------------GREPVPPVAIIPL--GTGNDLSRSFGW 198 (479)
Q Consensus 157 DGTv~~Vl~~l~~~~~~------------~~~~~~plgiIPl--GTgNDfArslg~ 198 (479)
|++-.++.++.-+-.. ...+.+|+-.||. |||....+..-+
T Consensus 96 -GS~~D~AK~i~~~~~~~~~~~~~~~i~~~~~~~~plIaIPTTaGTGSEvT~~aVi 150 (377)
T COG1454 96 -GSVIDAAKAIALLAENPGSVLDYEGIGKVKKPKAPLIAIPTTAGTGSEVTPFAVI 150 (377)
T ss_pred -ccHHHHHHHHHHHhhCCchhhhhcccccccCCCCCEEEecCCCcchhhhcCeEEE
Confidence 7777777665332110 0123378888885 899888876665
No 71
>cd08185 Fe-ADH1 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenases-like (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase fold and is a member of the iron-containing alcohol dehydrogenase-like family. They are distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized. Their specific function is unknown. They are present in bacteria and archaea.
Probab=67.67 E-value=21 Score=37.32 Aligned_cols=106 Identities=18% Similarity=0.203 Sum_probs=59.1
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eE-EEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FD-LSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~d-l~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
++++|+.-+.+-.. ..+.+++.+.|.+..+ +. +....|.. .....++.++.+ + ..+.|.||++|| |
T Consensus 26 ~r~livt~~~~~~~--~g~~~~v~~~L~~~~~~~~~~~~v~~~p----~~~~v~~~~~~~----~-~~~~D~IiavGG-G 93 (380)
T cd08185 26 KKALIVTGNGSSKK--TGYLDRVIELLKQAGVEVVVFDKVEPNP----TTTTVMEGAALA----R-EEGCDFVVGLGG-G 93 (380)
T ss_pred CeEEEEeCCCchhh--ccHHHHHHHHHHHcCCeEEEeCCccCCC----CHHHHHHHHHHH----H-HcCCCEEEEeCC-c
Confidence 68889987766322 2366667777765321 21 11222222 123344444332 2 246789999998 7
Q ss_pred hHHHHHHHHhhccc-----------------cCCCCCCcEEeecC--CCccccccccCC
Q 011722 159 TVGWVLGSVGELNK-----------------QGREPVPPVAIIPL--GTGNDLSRSFGW 198 (479)
Q Consensus 159 Tv~~Vl~~l~~~~~-----------------~~~~~~~plgiIPl--GTgNDfArslg~ 198 (479)
++-.++..+.-.-. ......+|+..||. |||.-..+.--+
T Consensus 94 S~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTtagTGSE~t~~avi 152 (380)
T cd08185 94 SSMDTAKAIAFMAANEGDYWDYIFGGTGKGKPPPEKALPIIAITTTAGTGSEADPWAVI 152 (380)
T ss_pred cHHHHHHHHHHHhhCCCCHHHHhcccccccccCCCCCCCEEEEcCCChhhhccCCeEEE
Confidence 77777766532100 00123578999996 888777665544
No 72
>PRK15138 aldehyde reductase; Provisional
Probab=67.60 E-value=25 Score=36.97 Aligned_cols=105 Identities=13% Similarity=0.184 Sum_probs=53.5
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhH
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv 160 (479)
++++|+.-+.+=.. ....+++.+.|....+..+..+.|.. .....++.++.+ + ..+.|.||++|| |.+
T Consensus 30 ~~~livt~~~~~~~--~g~~~~v~~~L~~~~~~~f~~v~~~p----~~~~v~~~~~~~----~-~~~~D~IIaiGG-GS~ 97 (387)
T PRK15138 30 ARVLITYGGGSVKK--TGVLDQVLDALKGMDVLEFGGIEPNP----TYETLMKAVKLV----R-EEKITFLLAVGG-GSV 97 (387)
T ss_pred CeEEEECCCchHHh--cCcHHHHHHHhcCCeEEEECCccCCC----CHHHHHHHHHHH----H-HcCCCEEEEeCC-hHH
Confidence 67777755443221 23456677766532221222233332 123344444332 2 246789999999 666
Q ss_pred HHHHHHHhhc--c-------------ccCCCCCCcEEeecC--CCccccccccC
Q 011722 161 GWVLGSVGEL--N-------------KQGREPVPPVAIIPL--GTGNDLSRSFG 197 (479)
Q Consensus 161 ~~Vl~~l~~~--~-------------~~~~~~~~plgiIPl--GTgNDfArslg 197 (479)
-.++..+.-. + .....+.+|+..||. |||-......-
T Consensus 98 iD~AK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~P~iaVPTTaGTGSE~t~~av 151 (387)
T PRK15138 98 LDGTKFIAAAANYPENIDPWHILETGGKEIKSAIPMGSVLTLPATGSESNAGAV 151 (387)
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHhccCCCcCCCCCEEEEecCCccccccCCCEE
Confidence 6655544211 0 000123468888997 88876655443
No 73
>cd08177 MAR Maleylacetate reductase is involved in many aromatic compounds degradation pathways of aerobic microbes. Maleylacetate reductases (MAR) play an important role in the degradation of aromatic compounds in aerobic microbes. In fungi and yeasts, the enzymes are involved in the catabolism of compounds such as phenol, tyrosine, benzoate, 4-hydroxybenzoate and resorcinol. In bacteria, the enzymes contribute to the degradation of resorcinol, 2,4-dihydroxybenzoate ([beta]-resorcylate) and 2,6-dihydroxybenzoate ([gamma]-resorcylate) via hydroxyquinol and maleylacetate. Maleylacetate reductases catalyze NADH- or NADPH-dependent reduction, at the carbon-carbon double bond, of maleylacetate or 2-chloromaleylacetate to 3-oxoadipate. In the case of 2-chloromaleylacetate, Maleylacetate reductases initially catalyses the NAD(P)H-dependent dechlorination to maleylacetate, which is then reduced to 3-oxoadipate. This enzyme is a homodimer. It is inhibited by thiol-blocking reagents such as p-
Probab=67.27 E-value=15 Score=37.77 Aligned_cols=91 Identities=18% Similarity=0.229 Sum_probs=51.3
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhH
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv 160 (479)
++++|+..+.. .....+++.+.|.......+....+.. .....+++++.. + ..+.|.||++|| |++
T Consensus 24 ~~~livt~~~~----~~~~~~~v~~~l~~~~~~~~~~~~~~p----~~~~v~~~~~~~----~-~~~~d~IIaiGG-Gs~ 89 (337)
T cd08177 24 SRALVLTTPSL----ATKLAERVASALGDRVAGTFDGAVMHT----PVEVTEAAVAAA----R-EAGADGIVAIGG-GST 89 (337)
T ss_pred CeEEEEcChHH----HHHHHHHHHHHhccCCcEEeCCCCCCC----CHHHHHHHHHHH----H-hcCCCEEEEeCC-cHH
Confidence 57777764322 223667777777654211111222221 112334444332 2 245789999998 999
Q ss_pred HHHHHHHhhccccCCCCCCcEEeecC-CCccc
Q 011722 161 GWVLGSVGELNKQGREPVPPVAIIPL-GTGND 191 (479)
Q Consensus 161 ~~Vl~~l~~~~~~~~~~~~plgiIPl-GTgND 191 (479)
..++..+.-. ...|+..||. -||..
T Consensus 90 iD~aK~ia~~------~~~p~i~IPTtatgse 115 (337)
T cd08177 90 IDLAKAIALR------TGLPIIAIPTTLSGSE 115 (337)
T ss_pred HHHHHHHHHH------hcCCEEEEcCCchhhh
Confidence 9999887653 3578888884 24443
No 74
>PRK00002 aroB 3-dehydroquinate synthase; Reviewed
Probab=66.62 E-value=19 Score=37.24 Aligned_cols=98 Identities=15% Similarity=0.168 Sum_probs=55.2
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEE---EeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEc
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDL---SEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAG 155 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl---~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~G 155 (479)
.++++|+..+... ..+.+++.+.|..... +.+ ....+.. ......++.+.+.+ ......+.||++|
T Consensus 31 ~~~~livtd~~~~----~~~~~~v~~~L~~~gi~~~~~~~~~~e~~~----~~~~v~~~~~~~~~--~~~~r~d~IIavG 100 (358)
T PRK00002 31 GKKVAIVTDETVA----PLYLEKLRASLEAAGFEVDVVVLPDGEQYK----SLETLEKIYDALLE--AGLDRSDTLIALG 100 (358)
T ss_pred CCeEEEEECCchH----HHHHHHHHHHHHhcCCceEEEEeCCCCCCC----CHHHHHHHHHHHHH--cCCCCCCEEEEEc
Confidence 4688888876553 2367777777765421 221 1111211 22344444433221 0123458899988
Q ss_pred CchhHHHHHHHHhhccccCCCCCCcEEeecC--CCcccc
Q 011722 156 GDGTVGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDL 192 (479)
Q Consensus 156 GDGTv~~Vl~~l~~~~~~~~~~~~plgiIPl--GTgNDf 192 (479)
| |++..++..+.... ...+|+..||. ++.+|-
T Consensus 101 G-Gsv~D~aK~iA~~~----~~gip~i~IPTT~~s~~ds 134 (358)
T PRK00002 101 G-GVIGDLAGFAAATY----MRGIRFIQVPTTLLAQVDS 134 (358)
T ss_pred C-cHHHHHHHHHHHHh----cCCCCEEEcCchhhhcccc
Confidence 8 89999998775321 24678999997 444444
No 75
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=65.67 E-value=30 Score=31.53 Aligned_cols=80 Identities=18% Similarity=0.309 Sum_probs=46.5
Q ss_pred CCCChhHHHHHHHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccCC-ccEEEEEcCchhHHHHHHHHhh
Q 011722 92 GGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGDGTVGWVLGSVGE 169 (479)
Q Consensus 92 G~~~~~~~~~~l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~-~~~Vvv~GGDGTv~~Vl~~l~~ 169 (479)
|+.......++....|....+ |++.+...+ +.+..+.++.++.. ..+ .-.|.++|+++-+.-++.++..
T Consensus 8 gs~SD~~~~~~a~~~L~~~gi~~~~~V~saH----R~p~~l~~~~~~~~-----~~~~~viIa~AG~~a~Lpgvva~~t~ 78 (150)
T PF00731_consen 8 GSTSDLPIAEEAAKTLEEFGIPYEVRVASAH----RTPERLLEFVKEYE-----ARGADVIIAVAGMSAALPGVVASLTT 78 (150)
T ss_dssp SSGGGHHHHHHHHHHHHHTT-EEEEEE--TT----TSHHHHHHHHHHTT-----TTTESEEEEEEESS--HHHHHHHHSS
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEEEEecc----CCHHHHHHHHHHhc-----cCCCEEEEEECCCcccchhhheeccC
Confidence 443344567777777777654 887765433 24555666665542 122 3468888999999999998853
Q ss_pred ccccCCCCCCcEEeecCCCc
Q 011722 170 LNKQGREPVPPVAIIPLGTG 189 (479)
Q Consensus 170 ~~~~~~~~~~plgiIPlGTg 189 (479)
.|-||+ |.-++
T Consensus 79 --------~PVIgv-P~~~~ 89 (150)
T PF00731_consen 79 --------LPVIGV-PVSSG 89 (150)
T ss_dssp --------S-EEEE-EE-ST
T ss_pred --------CCEEEe-ecCcc
Confidence 456666 65544
No 76
>cd08549 G1PDH_related Glycerol-1-phosphate_dehydrogenase and related proteins. Bacterial and archeal glycerol-1-phosphate dehydrogenase-like oxidoreductases. The proteins have similarity with glycerol-1-phosphate dehydrogenase (G1PDH). G1PDH plays a role in the synthesis of phosphoglycerolipids in gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires Ni++ ion. It also contains archaeal Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH) that plays an important role in the formation of the enantiomeric configuration of the glycerophosphate backbone (sn-glycerol-1-phosphate) of archaeal ether lipids.
Probab=63.30 E-value=26 Score=35.96 Aligned_cols=86 Identities=10% Similarity=0.019 Sum_probs=51.3
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEEe--ecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCc
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSE--VKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~~--~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGD 157 (479)
++++||..+..-.. ..+++.+.|..... +.+.. ..+.. .....+++++.+ +. ..+.||+.||
T Consensus 25 ~kvlivtd~~~~~~----~~~~i~~~L~~~~~~~~i~~~~~~~~p----~~~~v~~~~~~~----~~--~~d~IIaiGG- 89 (332)
T cd08549 25 SKIMIVCGNNTYKV----AGKEIIERLESNNFTKEVLERDSLLIP----DEYELGEVLIKL----DK--DTEFLLGIGS- 89 (332)
T ss_pred CcEEEEECCcHHHH----HHHHHHHHHHHcCCeEEEEecCCCCCC----CHHHHHHHHHHh----hc--CCCEEEEECC-
Confidence 67888887666432 23566667754321 22211 11110 123445555443 22 5689999999
Q ss_pred hhHHHHHHHHhhccccCCCCCCcEEeecCC
Q 011722 158 GTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (479)
Q Consensus 158 GTv~~Vl~~l~~~~~~~~~~~~plgiIPlG 187 (479)
|++..++..+.-. ...|+-.||.=
T Consensus 90 Gsv~D~aK~iA~~------~gip~I~VPTT 113 (332)
T cd08549 90 GTIIDLVKFVSFK------VGKPFISVPTA 113 (332)
T ss_pred cHHHHHHHHHHHH------cCCCEEEeCCC
Confidence 9999999887642 46789999963
No 77
>cd08179 NADPH_BDH NADPH-dependent butanol dehydrogenase involved in the butanol and ethanol formation pathway in bacteria. NADPH-dependent butanol dehydrogenase (BDH) is involved in the butanol and ethanol formation pathway of some bacteria. The fermentation process is characterized by an acid producing growth phase, followed by a solvent producing phase. The latter phase is associated with the induction of solventogenic enzymes such as butanol dehydrogenase. The activity of the enzymes require NADPH as cofactor, as well as divalent ions zinc or iron. This family is a member of the iron-containing alcohol dehydrogenase superfamily. Protein structure has a dehydroquinate synthase-like fold.
Probab=63.02 E-value=21 Score=37.22 Aligned_cols=103 Identities=14% Similarity=0.155 Sum_probs=53.4
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEE---eecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCc
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLS---EVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~---~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGD 157 (479)
++++|+.-+.+-... ...+++.+.|++.. +++. ...|.. .....++.++.+ + ..+.|.||++||
T Consensus 24 ~r~livt~~~~~~~~--g~~~~v~~~L~~~g-~~~~~~~~v~~~p----~~~~v~~~~~~~----~-~~~~D~IIavGG- 90 (375)
T cd08179 24 KKAFIVTGGGSMKKF--GFLDKVEAYLKEAG-IEVEVFEGVEPDP----SVETVLKGAEAM----R-EFEPDWIIALGG- 90 (375)
T ss_pred CeEEEEeCchHHHhC--ChHHHHHHHHHHcC-CeEEEeCCCCCCc----CHHHHHHHHHHH----H-hcCCCEEEEeCC-
Confidence 677777655443322 25566677775432 2221 122222 113334444332 2 245689999999
Q ss_pred hhHHHHHHHHhhc--cc-------------cCCCCCCcEEeecC--CCcccccccc
Q 011722 158 GTVGWVLGSVGEL--NK-------------QGREPVPPVAIIPL--GTGNDLSRSF 196 (479)
Q Consensus 158 GTv~~Vl~~l~~~--~~-------------~~~~~~~plgiIPl--GTgNDfArsl 196 (479)
|++..++..+.-. +. .......|+..||. |||--..+.-
T Consensus 91 GSviD~AK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~p~iaIPTtagTGSE~t~~a 146 (375)
T cd08179 91 GSPIDAAKAMWIFYEYPELTFEDIVKPFTLPELRNKARFCAIPSTSGTATEVTAFS 146 (375)
T ss_pred ccHHHHHHHHHHHHhCCCcCHHHHhccccccccCCCCCEEEeCCCCchhHhhCCeE
Confidence 7777776655311 00 00013468999997 7776655433
No 78
>TIGR01357 aroB 3-dehydroquinate synthase. This model represents 3-dehydroquinate synthase, the enzyme catalyzing the second of seven steps in the shikimate pathway of chorismate biosynthesis. Chorismate is the last common intermediate in the biosynthesis of all three aromatic amino acids.
Probab=62.62 E-value=26 Score=36.03 Aligned_cols=91 Identities=15% Similarity=0.175 Sum_probs=51.2
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eE---EEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcC
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FD---LSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG 156 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~d---l~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GG 156 (479)
++++|+..+..- ....+++.+.|..... +. +....+.. .....+++.+.+.+. .....+.||++||
T Consensus 21 ~~~livtd~~~~----~~~~~~v~~~L~~~g~~~~~~~~~~~e~~~----~~~~v~~~~~~~~~~--~~~r~d~IIavGG 90 (344)
T TIGR01357 21 SKLVIITDETVA----DLYADKLLEALQALGYNVLKLTVPDGEESK----SLETVQRLYDQLLEA--GLDRSSTIIALGG 90 (344)
T ss_pred CeEEEEECCchH----HHHHHHHHHHHHhcCCceeEEEeCCCCCCC----CHHHHHHHHHHHHHc--CCCCCCEEEEEcC
Confidence 788888865543 2356777777765421 22 11111111 123444444333210 1123578999988
Q ss_pred chhHHHHHHHHhhccccCCCCCCcEEeecC
Q 011722 157 DGTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (479)
Q Consensus 157 DGTv~~Vl~~l~~~~~~~~~~~~plgiIPl 186 (479)
|++..++..+.... ...+|+..||.
T Consensus 91 -Gsv~D~aK~iA~~~----~~~~p~i~VPT 115 (344)
T TIGR01357 91 -GVVGDLAGFVAATY----MRGIRFIQVPT 115 (344)
T ss_pred -hHHHHHHHHHHHHH----ccCCCEEEecC
Confidence 89998888775321 24678999997
No 79
>PF13685 Fe-ADH_2: Iron-containing alcohol dehydrogenase; PDB: 3CE9_C.
Probab=62.11 E-value=13 Score=36.66 Aligned_cols=93 Identities=16% Similarity=0.149 Sum_probs=50.6
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhH
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv 160 (479)
++++|+.-+. -....-+++++.|... .|++....... .+-....+.++..+.. ..+.+.||++|| ||+
T Consensus 20 ~~~lvv~d~~----t~~~~g~~v~~~l~~~-g~~v~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~d~ii~vGg-G~i 87 (250)
T PF13685_consen 20 KKVLVVTDEN----TYKAAGEKVEESLKSA-GIEVAVIEEFV-GDADEDEVEKLVEALR-----PKDADLIIGVGG-GTI 87 (250)
T ss_dssp SEEEEEEETT----HHHHHHHHHHHHHHTT-T-EEEEEE-EE----BHHHHHHHHTTS-------TT--EEEEEES-HHH
T ss_pred CcEEEEEcCC----HHHHHHHHHHHHHHHc-CCeEEEEecCC-CCCCHHHHHHHHHHhc-----ccCCCEEEEeCC-cHH
Confidence 5777877544 3344556777777654 34444221000 0111234455554331 246678999888 999
Q ss_pred HHHHHHHhhccccCCCCCCcEEeecCCCccc
Q 011722 161 GWVLGSVGELNKQGREPVPPVAIIPLGTGND 191 (479)
Q Consensus 161 ~~Vl~~l~~~~~~~~~~~~plgiIPlGTgND 191 (479)
+.+..-+... .+.|+-.+|.=-.||
T Consensus 88 ~D~~K~~A~~------~~~p~isVPTa~S~D 112 (250)
T PF13685_consen 88 IDIAKYAAFE------LGIPFISVPTAASHD 112 (250)
T ss_dssp HHHHHHHHHH------HT--EEEEES--SSG
T ss_pred HHHHHHHHHh------cCCCEEEeccccccc
Confidence 9999887663 578999999876665
No 80
>cd08192 Fe-ADH7 Iron-containing alcohol dehydrogenases-like, involved in the linear alkylbenzenesulfonate (LAS) degradation pathway. NAD-dependent iron-containing alcohol dehydrogenase-like. Proteins in this family are NAD-dependent alcohol dehydrogenases which are involved in the linear alkylbenzenesulfonate (LAS) degradation pathway. They catalyze the oxidation of beta-hydroxy CoA ester to beta-oxo CoA ester, which then be subject to CoA-dependent thiolysis to yield acetyl-CoA and 6-C8-SPC-CoA. The major laundry surfactant in worldwide use is commercial linear alkylbenzenesulfonate (LAS) which contains 20 congeners of linear alkanes (C10 to C13). LAS is fully biodegradable in oxic environments. Degradation involves microbial communities. Parvibaculum lavamentivorans DS-1T is a representative member of many heterotrophic, LAS-degrading communities, in which it catalyzes the first steps of LAS degradation. Strain DS-1T is a small heterotrophic bacterium able to omega-oxygenate the comm
Probab=61.41 E-value=34 Score=35.58 Aligned_cols=101 Identities=20% Similarity=0.295 Sum_probs=52.4
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eE-EEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FD-LSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~d-l~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
++++|+..+..-. . ...+++.+.|.+... +. +....+.. .....++.++.+ + ..+.|.||++|| |
T Consensus 25 ~~~liv~~~~~~~-~--~~~~~v~~~L~~~g~~~~~~~~v~~~p----~~~~v~~~~~~~----~-~~~~d~IIaiGG-G 91 (370)
T cd08192 25 KRPLIVTDPGLAA-L--GLVARVLALLEDAGLAAALFDEVPPNP----TEAAVEAGLAAY----R-AGGCDGVIAFGG-G 91 (370)
T ss_pred CeEEEEcCcchhh-C--ccHHHHHHHHHHcCCeEEEeCCCCCCC----CHHHHHHHHHHH----H-hcCCCEEEEeCC-c
Confidence 5777776654421 1 245566777765321 11 11222222 112344444332 2 246789999999 8
Q ss_pred hHHHHHHHHhhccc----------------cCCCCCCcEEeecC--CCcccccc
Q 011722 159 TVGWVLGSVGELNK----------------QGREPVPPVAIIPL--GTGNDLSR 194 (479)
Q Consensus 159 Tv~~Vl~~l~~~~~----------------~~~~~~~plgiIPl--GTgNDfAr 194 (479)
++..++..+.-... ......+|+..||. |||-...+
T Consensus 92 SviD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTtagtgse~t~ 145 (370)
T cd08192 92 SALDLAKAVALMAGHPGPLWDYEDIEGGWPRITDAIPPLIAIPTTAGTGSEVGR 145 (370)
T ss_pred hHHHHHHHHHHHHhCCCCHHHHhcccccccccCCCCCCEEEecCCCchhhhhCC
Confidence 88888766533210 00013478888887 66654443
No 81
>cd08182 HEPD Hydroxyethylphosphoate dehydrogenase (HEPD) catalyzes the reduction of phosphonoacetaldehyde (PnAA) to hydroxyethylphosphoate (HEP). Hydroxyethylphosphoate dehydrogenase (HEPD) catalyzes the reduction of phosphonoacetaldehyde (PnAA) to hydroxyethylphosphoate (HEP) with either NADH or NADPH as a cofactor. NADH is the preferred cofactor. PnAA is a biosynthetic intermediate for several phosphonates such as the antibiotic fosfomycin, phosphinothricin tripeptide (PTT), and 2-aminoethylphosphonate (AEP). This enzyme is named PhpC in PTT biosynthesis pathway in Streptomyces hygroscopicus and S. viridochromogenes. Members of this family are only found in bacteria.
Probab=61.33 E-value=34 Score=35.47 Aligned_cols=48 Identities=27% Similarity=0.443 Sum_probs=30.3
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhcc----------------ccCCCCCCcEEeecC--CCcccccc
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELN----------------KQGREPVPPVAIIPL--GTGNDLSR 194 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~----------------~~~~~~~~plgiIPl--GTgNDfAr 194 (479)
.+.|.||++|| |++..++..+.-.- .......+|+..||. |||--...
T Consensus 76 ~~~D~IIavGG-Gs~~D~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTtagtgse~t~ 141 (367)
T cd08182 76 FGPDAVLAVGG-GSVLDTAKALAALLGAPREALEDLRIRNKERENRERALPLIAIPTTAGTGSEVTP 141 (367)
T ss_pred cCcCEEEEeCC-cHHHHHHHHHHHHHhCCCcHHHHHHHhccCCCCCCCCCCEEEeCCCCCchhhhCC
Confidence 35689999998 88888776654320 000124578999997 66655443
No 82
>cd08189 Fe-ADH5 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contains different protein domain. Proteins of this family have not been characterized. Their specific function is unknown.
Probab=61.23 E-value=40 Score=35.08 Aligned_cols=104 Identities=18% Similarity=0.297 Sum_probs=54.2
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eE-EEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCc
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FD-LSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~d-l~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGD 157 (479)
.++++|+..+..-. . ..++++...|....+ +. +....+.. .....+++++.+ + ..+.|.||++||
T Consensus 26 ~~~~lvvt~~~~~~-~--g~~~~v~~~L~~~g~~~~~~~~v~~~p----~~~~v~~~~~~~----~-~~~~d~IIaiGG- 92 (374)
T cd08189 26 VKKVLIVTDKGLVK-L--GLLDKVLEALEGAGIEYAVYDGVPPDP----TIENVEAGLALY----R-ENGCDAILAVGG- 92 (374)
T ss_pred CCeEEEEeCcchhh-c--ccHHHHHHHHHhcCCeEEEeCCCCCCc----CHHHHHHHHHHH----H-hcCCCEEEEeCC-
Confidence 36788887655432 1 245666777754321 22 11222222 112334444332 2 245689999999
Q ss_pred hhHHHHHHHHhhcccc-------------CCCCCCcEEeecC--CCcccccccc
Q 011722 158 GTVGWVLGSVGELNKQ-------------GREPVPPVAIIPL--GTGNDLSRSF 196 (479)
Q Consensus 158 GTv~~Vl~~l~~~~~~-------------~~~~~~plgiIPl--GTgNDfArsl 196 (479)
|++..++..+.-.-.. ...+.+|+..||. |||-...+..
T Consensus 93 GS~~D~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTtagTGsE~t~~a 146 (374)
T cd08189 93 GSVIDCAKAIAARAANPKKSLRKLTGLLKVKKPLPPLFAIPTTAGTGSEVTIAA 146 (374)
T ss_pred ccHHHHHHHHHHHHhCCCCCHHHHhCccccCCCCCCEEEEECCCccccccCCeE
Confidence 7777777654321100 0012368889986 7776655543
No 83
>cd08184 Fe-ADH3 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Proteins of this family have not been characterized. Their specific function is unknown. The protein structure represents a dehydroquinate synthase-like fold and is belonged to the iron-containing alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron or zinc ions. Members of this family are mainly found in bacteria.
Probab=60.19 E-value=42 Score=34.76 Aligned_cols=50 Identities=30% Similarity=0.286 Sum_probs=30.8
Q ss_pred CccEEEEEcCchhHHHHHHHHhhccc------------cCCCCCCcEEeecC--CCccccccccC
Q 011722 147 QKMRIVVAGGDGTVGWVLGSVGELNK------------QGREPVPPVAIIPL--GTGNDLSRSFG 197 (479)
Q Consensus 147 ~~~~Vvv~GGDGTv~~Vl~~l~~~~~------------~~~~~~~plgiIPl--GTgNDfArslg 197 (479)
+.|.||++|| |++-.++..+.-.-. ....+.+|+..||. |||--..+.--
T Consensus 81 ~~D~IIaiGG-GS~iD~AKaia~~~~~~~~~~~~~~~~~~~~~~~PlIaVPTTaGTGSE~t~~aV 144 (347)
T cd08184 81 LPCAIVGIGG-GSTLDVAKAVSNMLTNPGSAEDYQGWDLVKNPAVYKIGIPTLSGTGAEASRTAV 144 (347)
T ss_pred CCCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHhcccccccCCCCcEEEEeCCCccccccCCcEE
Confidence 5789999998 666666655432100 00113467999996 88876665443
No 84
>PRK09860 putative alcohol dehydrogenase; Provisional
Probab=59.89 E-value=44 Score=35.05 Aligned_cols=106 Identities=12% Similarity=0.161 Sum_probs=56.0
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-e-EEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCc
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~-dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGD 157 (479)
.++++|+.-+..- . ..+++++.+.|....+ + .+..+.|.. .....++.++.+ + ..+.|.||++||
T Consensus 31 ~~~~livt~~~~~-~--~g~~~~v~~~L~~~~i~~~~f~~v~~np----~~~~v~~~~~~~----~-~~~~D~IiaiGG- 97 (383)
T PRK09860 31 FTRTLIVTDNMLT-K--LGMAGDVQKALEERNIFSVIYDGTQPNP----TTENVAAGLKLL----K-ENNCDSVISLGG- 97 (383)
T ss_pred CCEEEEEcCcchh-h--CccHHHHHHHHHHcCCeEEEeCCCCCCc----CHHHHHHHHHHH----H-HcCCCEEEEeCC-
Confidence 3677776543221 1 2355677777765432 1 112233322 113334444332 2 246789999999
Q ss_pred hhHHHHHHHHhhc---c---------ccCCCCCCcEEeecC--CCccccccccCC
Q 011722 158 GTVGWVLGSVGEL---N---------KQGREPVPPVAIIPL--GTGNDLSRSFGW 198 (479)
Q Consensus 158 GTv~~Vl~~l~~~---~---------~~~~~~~~plgiIPl--GTgNDfArslg~ 198 (479)
|++-.++..+.-+ . .......+|+..||. |||-...+.--+
T Consensus 98 GS~iD~AK~ia~~~~~~~~~~~~~~~~~~~~~~~p~iaIPTTagTGSE~t~~avi 152 (383)
T PRK09860 98 GSPHDCAKGIALVAANGGDIRDYEGVDRSAKPQLPMIAINTTAGTASEMTRFCII 152 (383)
T ss_pred chHHHHHHHHHHHHHCCCCHHHHhCcCccCCCCCCEEEEeCCCcchhccCceEEE
Confidence 6666665554320 0 001124578999997 898877765544
No 85
>cd08174 G1PDH-like Glycerol-1-phosphate dehydrogenase-like. Glycerol-1-phosphate dehydrogenase-like. The proteins of this family have not been characterized. The protein sequences have high similarity with that of glycerol-1-phosphate dehydrogenase (G1PDH). G1PDH plays a role in the synthesis of phosphoglycerolipids in Gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires Ni++ ion. This family is bacteria specific.
Probab=59.42 E-value=70 Score=32.65 Aligned_cols=37 Identities=22% Similarity=0.146 Sum_probs=29.0
Q ss_pred CccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCcc
Q 011722 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGN 190 (479)
Q Consensus 147 ~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgN 190 (479)
..+.||++|| |++..++..+... ..+|+..||.=-++
T Consensus 75 ~~d~iIaiGG-Gsv~D~aK~vA~~------~~~p~i~vPTt~~t 111 (331)
T cd08174 75 NVDAVVGIGG-GKVIDVAKYAAFL------RGIPLSVPTTNLND 111 (331)
T ss_pred CCCEEEEeCC-cHHHHHHHHHHhh------cCCCEEEecCcccc
Confidence 4688999998 9999999888653 56899999974333
No 86
>PRK06203 aroB 3-dehydroquinate synthase; Reviewed
Probab=57.86 E-value=64 Score=33.99 Aligned_cols=99 Identities=18% Similarity=0.152 Sum_probs=52.6
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe----eEEEeecCccceechh-hHHHHHHhcchhhhhccCCccEEEEE
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV----FDLSEVKPHEFVQYGL-ACLEKLAELGDFCAKDTRQKMRIVVA 154 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv----~dl~~~~p~~~~t~~~-~~~~~la~~~~~~a~~~~~~~~Vvv~ 154 (479)
.++++||..+.--.. ...+.+++...|..... |+....-+.....+.. ....++.+.+.+ ......+.||++
T Consensus 42 ~~r~liVtD~~v~~~-~~~l~~~v~~~L~~~g~~~~~~~~~~~~~~ge~~k~~~~~v~~i~~~~~~--~~~dr~d~IIai 118 (389)
T PRK06203 42 PKKVLVVIDSGVLRA-HPDLLEQITAYFAAHADVLELVAEPLVVPGGEAAKNDPALVEALHAAINR--HGIDRHSYVLAI 118 (389)
T ss_pred CCeEEEEECchHHHh-hhhHHHHHHHHHHhcCCceeeeeeEEEccCCccCCCcHHHHHHHHHHHHH--cCCCCCceEEEe
Confidence 467888887655431 12366778888765432 3322111111111111 223333332221 012345688888
Q ss_pred cCchhHHHHHHHHhhccccCCCCCCcEEeecC
Q 011722 155 GGDGTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (479)
Q Consensus 155 GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPl 186 (479)
|| |++..++..+.... ....|+-.||.
T Consensus 119 GG-Gsv~D~ak~iA~~~----~rgip~I~IPT 145 (389)
T PRK06203 119 GG-GAVLDMVGYAAATA----HRGVRLIRIPT 145 (389)
T ss_pred CC-cHHHHHHHHHHHHh----cCCCCEEEEcC
Confidence 88 89999987775421 24578999996
No 87
>PRK00843 egsA NAD(P)-dependent glycerol-1-phosphate dehydrogenase; Reviewed
Probab=56.87 E-value=49 Score=34.15 Aligned_cols=90 Identities=14% Similarity=0.155 Sum_probs=53.1
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhH
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv 160 (479)
++++||..+.+-.. ..+++++.|.....+.+. ..|.. .....+++++++. ..+.+.||++|| |++
T Consensus 35 ~~~livtd~~~~~~----~~~~l~~~l~~~~~~~~~-~~~~~----t~~~v~~~~~~~~-----~~~~d~IIaiGG-Gsv 99 (350)
T PRK00843 35 GRALIVTGPTTKKI----AGDRVEENLEDAGDVEVV-IVDEA----TMEEVEKVEEKAK-----DVNAGFLIGVGG-GKV 99 (350)
T ss_pred CeEEEEECCcHHHH----HHHHHHHHHHhcCCeeEE-eCCCC----CHHHHHHHHHHhh-----ccCCCEEEEeCC-chH
Confidence 68889888776532 345566666433112111 22222 2234455554432 134688999998 999
Q ss_pred HHHHHHHhhccccCCCCCCcEEeecCCCccc
Q 011722 161 GWVLGSVGELNKQGREPVPPVAIIPLGTGND 191 (479)
Q Consensus 161 ~~Vl~~l~~~~~~~~~~~~plgiIPlGTgND 191 (479)
..++..+.-. ...|+-.||.=-++|
T Consensus 100 ~D~ak~vA~~------rgip~I~IPTT~~td 124 (350)
T PRK00843 100 IDVAKLAAYR------LGIPFISVPTAASHD 124 (350)
T ss_pred HHHHHHHHHh------cCCCEEEeCCCccCC
Confidence 9999887642 467899999644434
No 88
>cd08198 DHQS-like2 Dehydroquinate synthase (DHQS)-like. DHQS catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis. Dehydroquinate synthase-like proteins. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. The activity of DHQS requires NAD as cofactor. Proteins of this family share sequence similarity and functional motifs with that of dehydroquinate synthase, but the specific function has not been characterized.
Probab=56.85 E-value=87 Score=32.81 Aligned_cols=100 Identities=16% Similarity=0.166 Sum_probs=55.4
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eE---EEeecCccceech-hhHHHHHHhcchhhhhccCCccEEEEE
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FD---LSEVKPHEFVQYG-LACLEKLAELGDFCAKDTRQKMRIVVA 154 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~d---l~~~~p~~~~t~~-~~~~~~la~~~~~~a~~~~~~~~Vvv~ 154 (479)
.++++|+.++.-.. ....+.+.+...|.+..+ +. .....|....+.. .....++.+.+.+ ......+.||+.
T Consensus 30 ~~r~lvVtD~~v~~-~~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~ge~~k~~~~~v~~i~~~l~~--~~~~r~~~IIal 106 (369)
T cd08198 30 RPKVLVVIDSGVAQ-ANPQLASDIQAYAAAHADALRLVAPPHIVPGGEACKNDPDLVEALHAAINR--HGIDRHSYVIAI 106 (369)
T ss_pred CCeEEEEECcchHH-hhhhHHHHHHHHHHhcCCceeeeeeeEecCCCccCCChHHHHHHHHHHHHH--cCCCcCcEEEEE
Confidence 46888999876654 222366777777754321 22 1111222211222 1233344433221 112345689999
Q ss_pred cCchhHHHHHHHHhhccccCCCCCCcEEeecCC
Q 011722 155 GGDGTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (479)
Q Consensus 155 GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlG 187 (479)
|| |++..++..+.... ...+|+-.||.=
T Consensus 107 GG-G~v~D~ag~vA~~~----~rGip~I~IPTT 134 (369)
T cd08198 107 GG-GAVLDAVGYAAATA----HRGVRLIRIPTT 134 (369)
T ss_pred CC-hHHHHHHHHHHHHh----cCCCCEEEECCC
Confidence 98 99999998876431 246888889964
No 89
>TIGR02638 lactal_redase lactaldehyde reductase. This clade of genes encoding iron-containing alcohol dehydrogenase (pfam00465) proteins is generally found in apparent operons for the catabolism of rhamnose or fucose. Catabolism of both of these monosaccharides results in lactaldehyde which is reduced by this enzyme to 1,2 propanediol. This protein is alternatively known by the name 1,2 propanediol oxidoreductase. This enzyme is active under anaerobic conditions in E. coli while being inactivated by reactive oxygen species under aerobic conditions. Under aerobic conditions the lactaldehyde product of rhamnose and fucose catabolism is believed to be oxidized to lactate by a separate enzyme, lactaldehyde dehydrogenase.
Probab=56.21 E-value=44 Score=34.94 Aligned_cols=104 Identities=17% Similarity=0.314 Sum_probs=54.3
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEE-eecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCc
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLS-EVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~-~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGD 157 (479)
.++++|+.-+..-.. .+.+++...|.+..+ +.+. ...|.. .....++.++.+ + ..+.|.||++||
T Consensus 29 ~~r~lvvt~~~~~~~---g~~~~v~~~L~~~~i~~~~~~~v~~~p----~~~~v~~~~~~~----~-~~~~D~IiaiGG- 95 (379)
T TIGR02638 29 FKKALVVTDKDLIKF---GVADKVTDLLDEAGIAYELFDEVKPNP----TITVVKAGVAAF----K-ASGADYLIAIGG- 95 (379)
T ss_pred CCEEEEEcCcchhhc---cchHHHHHHHHHCCCeEEEECCCCCCc----CHHHHHHHHHHH----H-hcCCCEEEEeCC-
Confidence 367888876543221 255666677754321 2211 122222 123334444332 2 245689999999
Q ss_pred hhHHHHHHHHhhccc------------c--CCCCCCcEEeecC--CCcccccccc
Q 011722 158 GTVGWVLGSVGELNK------------Q--GREPVPPVAIIPL--GTGNDLSRSF 196 (479)
Q Consensus 158 GTv~~Vl~~l~~~~~------------~--~~~~~~plgiIPl--GTgNDfArsl 196 (479)
|++..++..+.-.-. . .....+|+..||. |||-...+..
T Consensus 96 GSviD~aKaia~~~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTTagTGse~t~~a 150 (379)
T TIGR02638 96 GSPIDTAKAIGIISNNPEFADVRSLEGVAPTKKPGVPIIAIPTTAGTAAEVTINY 150 (379)
T ss_pred hHHHHHHHHHHHHHhCCCCCCHHHhhCCCccCCCCCCEEEECCCCchhhhhCCEE
Confidence 777777755422100 0 0123578999997 7776665544
No 90
>PRK10624 L-1,2-propanediol oxidoreductase; Provisional
Probab=56.15 E-value=42 Score=35.07 Aligned_cols=106 Identities=15% Similarity=0.307 Sum_probs=55.1
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEE-eecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCc
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLS-EVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~-~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGD 157 (479)
.++++|+.-+..-. . .+.+++...|.+..+ +.+. ...|.+ .....++.++.+ + ..+.|.||++||
T Consensus 30 ~~~~lvvtd~~~~~-~--g~~~~v~~~L~~~g~~~~~~~~v~~~p----~~~~v~~~~~~~----~-~~~~D~IIaiGG- 96 (382)
T PRK10624 30 FKKALIVTDKTLVK-C--GVVAKVTDVLDAAGLAYEIYDGVKPNP----TIEVVKEGVEVF----K-ASGADYLIAIGG- 96 (382)
T ss_pred CCEEEEEeCcchhh-C--cchHHHHHHHHHCCCeEEEeCCCCCCc----CHHHHHHHHHHH----H-hcCCCEEEEeCC-
Confidence 36788887653322 1 255666666654321 2211 222222 113333333332 2 235689999998
Q ss_pred hhHHHHHHHHhhc--cc------------cCCCCCCcEEeecC--CCccccccccCC
Q 011722 158 GTVGWVLGSVGEL--NK------------QGREPVPPVAIIPL--GTGNDLSRSFGW 198 (479)
Q Consensus 158 GTv~~Vl~~l~~~--~~------------~~~~~~~plgiIPl--GTgNDfArslg~ 198 (479)
|++..++..+.-. +. ......+|+..||. |||--..+..-+
T Consensus 97 GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTTagTGse~t~~avi 153 (382)
T PRK10624 97 GSPQDTCKAIGIISNNPEFADVRSLEGVAPTKKPSVPIIAIPTTAGTAAEVTINYVI 153 (382)
T ss_pred hHHHHHHHHHHHHHHCCCCCCHHHHhCcCcccCCCCCEEEECCCCchhhhhcceeee
Confidence 7877777544211 00 00123578999996 777766664443
No 91
>cd08175 G1PDH Glycerol-1-phosphate dehydrogenase (G1PDH) catalyzes the reversible reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in an NADH-dependent manner. Glycerol-1-phosphate dehydrogenase (G1PDH) plays a role in the synthesis of phosphoglycerolipids in Gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires a Ni++ ion. In Bacillus subtilis, it has been described as AraM gene in L-arabinose (ara) operon. AraM protein forms homodimer. This family is bacteria specific.
Probab=55.75 E-value=31 Score=35.47 Aligned_cols=88 Identities=11% Similarity=0.093 Sum_probs=50.3
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEE-eecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLS-EVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~-~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
++++|+.-+.+- ....+++.+.|....+ +.+. ...+.. ........++++.+ ++ +.|.||++|| |
T Consensus 24 ~~~livtd~~~~----~~~~~~v~~~l~~~~i~~~~~~~~~~~~--~pt~~~v~~~~~~~----~~--~~d~IIaIGG-G 90 (348)
T cd08175 24 KKALIVADENTY----AAAGKKVEALLKRAGVVVLLIVLPAGDL--IADEKAVGRVLKEL----ER--DTDLIIAVGS-G 90 (348)
T ss_pred CcEEEEECCcHH----HHHHHHHHHHHHHCCCeeEEeecCCCcc--cCCHHHHHHHHHHh----hc--cCCEEEEECC-c
Confidence 577777654332 2234667777765432 2211 111210 01223444554433 22 6789999999 8
Q ss_pred hHHHHHHHHhhccccCCCCCCcEEeecCC
Q 011722 159 TVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (479)
Q Consensus 159 Tv~~Vl~~l~~~~~~~~~~~~plgiIPlG 187 (479)
++..++..+... ..+|+-.||.=
T Consensus 91 s~~D~aK~vA~~------~~~p~i~IPTT 113 (348)
T cd08175 91 TINDITKYVSYK------TGIPYISVPTA 113 (348)
T ss_pred HHHHHHHHHHHh------cCCCEEEecCc
Confidence 999999888653 46789999963
No 92
>PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents dual specificity protein-tyrosine phosphatases. Ser/Thr and Tyr dual specificity phosphatases are a group of enzymes with both Ser/Thr (3.1.3.16 from EC) and tyrosine specific protein phosphatase (3.1.3.48 from EC) activity able to remove both the serine/threonine or tyrosine-bound phosphate group from a wide range of phosphoproteins, including a number of enzymes which have been phosphorylated under the action of a kinase. Dual specificity protein phosphatases (DSPs) regulate mitogenic signal transduction and control the cell cycle. The crystal structure of a human DSP, vaccinia H1-related phosphatase (or VHR), has been determined at 2.1 angstrom resolution []. A shallow active site pocket in VHR allows for the hydrolysis of phosphorylated serine, threonine, or tyrosine protein residues, whereas the deeper active site of protein tyrosine phosphatases (PTPs) restricts substrate specificity to only phosphotyrosine. Positively charged crevices near the active site may explain the enzyme's preference for substrates with two phosphorylated residues. The VHR structure defines a conserved structural scaffold for both DSPs and PTPs. A "recognition region" connecting helix alpha1 to strand beta1, may determine differences in substrate specificity between VHR, the PTPs, and other DSPs. These proteins may also have inactive phosphatase domains, and dependent on the domain composition this loss of catalytic activity has different effects on protein function. Inactive single domain phosphatases can still specifically bind substrates, and protect again dephosphorylation, while the inactive domains of tandem phosphatases can be further subdivided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre [].; GO: 0008138 protein tyrosine/serine/threonine phosphatase activity, 0006470 protein dephosphorylation; PDB: 2G6Z_A 1MKP_A 1YZ4_A 2P4D_A 1M3G_A 1ZZW_A 2OUD_A 2HXP_A 3LJ8_A 1OHD_A ....
Probab=54.51 E-value=3.5 Score=35.78 Aligned_cols=34 Identities=15% Similarity=0.034 Sum_probs=29.3
Q ss_pred heehhhhcCCcc-eeecccccccccccccchhhhh
Q 011722 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVAM 49 (479)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~~~ 49 (479)
.++..+..|..| |||..|..|+-.++.+||....
T Consensus 65 ~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~~~ 99 (133)
T PF00782_consen 65 FIENAISEGGKVLVHCKAGLSRSGAVAAAYLMKKN 99 (133)
T ss_dssp HHHHHHHTTSEEEEEESSSSSHHHHHHHHHHHHHH
T ss_pred hhhhhhcccceeEEEeCCCcccchHHHHHHHHHHc
Confidence 446667888889 9999999999999999998754
No 93
>PLN02834 3-dehydroquinate synthase
Probab=54.38 E-value=51 Score=35.28 Aligned_cols=95 Identities=16% Similarity=0.129 Sum_probs=52.0
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcC----eeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEc
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQ----VFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAG 155 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~q----v~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~G 155 (479)
.++++||.++.... .+.+.+.+.|.... +|++.....+. ......++++++.+.+ ......+.||++|
T Consensus 100 g~rvlIVtD~~v~~----~~~~~v~~~L~~~g~~~~v~~~v~~~gE~--~ksl~~v~~~~~~l~~--~~~dr~~~VIAiG 171 (433)
T PLN02834 100 GKRVLVVTNETVAP----LYLEKVVEALTAKGPELTVESVILPDGEK--YKDMETLMKVFDKALE--SRLDRRCTFVALG 171 (433)
T ss_pred CCEEEEEECccHHH----HHHHHHHHHHHhcCCceEEEEEEecCCcC--CCCHHHHHHHHHHHHh--cCCCcCcEEEEEC
Confidence 37888888765542 36667777776532 22222111111 1123444444433221 0122355888888
Q ss_pred CchhHHHHHHHHhhccccCCCCCCcEEeecCC
Q 011722 156 GDGTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (479)
Q Consensus 156 GDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlG 187 (479)
| |++..++..+.... ...+|+-.||.-
T Consensus 172 G-Gsv~D~ak~~A~~y----~rgiplI~VPTT 198 (433)
T PLN02834 172 G-GVIGDMCGFAAASY----QRGVNFVQIPTT 198 (433)
T ss_pred C-hHHHHHHHHHHHHh----cCCCCEEEECCc
Confidence 8 89999998654321 246899999983
No 94
>TIGR02482 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokinase (EC 2.7.1.11) catalyzes the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This model hits bacterial ATP-dependent 6-phosphofructokinases which lack a beta-hairpin loop present in TIGR02483 family members. TIGR02483 contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. TIGR02477 represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (EC 2.7.1.90).
Probab=53.71 E-value=59 Score=33.08 Aligned_cols=41 Identities=32% Similarity=0.302 Sum_probs=31.5
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA 193 (479)
.+-+.++++|||||..-+.. |.+ ....|+--||-=--||+.
T Consensus 90 ~~Id~Li~IGGdgs~~~a~~-L~e------~~~i~vigiPkTIDNDl~ 130 (301)
T TIGR02482 90 LGIEGLVVIGGDGSYTGAQK-LYE------EGGIPVIGLPGTIDNDIP 130 (301)
T ss_pred cCCCEEEEeCCchHHHHHHH-HHH------hhCCCEEeecccccCCCc
Confidence 35679999999999876653 333 135788889999999997
No 95
>cd08199 EEVS 2-epi-5-epi-valiolone synthase (EEVS). 2-epi-5-epi-valiolone synthases catalyze the cyclization of sedoheptulose 7-phosphate to 2-epi-5-epi-valiolone in the biosynthesis of C(7)N-aminocyclitol-containing products. The cyclization product, 2-epi-5-epi-valiolone ((2S,3S,4S,5R)-5-(hydroxymethyl)cyclohexanon-2,3,4,5-tetrol), is a precursor of the valienamine moiety. The valienamine unit is responsible for their biological activities as various glycosidic hydrolases inhibitors. Two important microbial secondary metabolites, i.e., validamycin and acarbose, are used in agricultural and biomedical applications. Validamycine A is an antifungal antibiotic which has a strong trehalase inhibitory activity and has been used to control sheath blight disease in rice caused by Rhizoctonia solani. Acarbose is an alpha-glucosidase inhibitor used for the treatment of type II insulin-independent diabetes. Salbostatin produced by Streptomyces albus also belongs to this family. It exhibits s
Probab=53.20 E-value=49 Score=34.38 Aligned_cols=95 Identities=16% Similarity=0.257 Sum_probs=51.1
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccCCc-cEEEEEcCc
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQK-MRIVVAGGD 157 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~-~~Vvv~GGD 157 (479)
.++++||..+..-. ...+++.+.|..... +........+ ........+++.+.+.+. ..... +.||++||
T Consensus 26 ~~~~lvVtd~~v~~----~~~~~v~~~l~~~g~~~~~~v~~~~e-~~~s~~~v~~~~~~l~~~--~~~r~~d~IVaiGG- 97 (354)
T cd08199 26 SGRRFVVVDQNVDK----LYGKKLREYFAHHNIPLTILVLRAGE-AAKTMDTVLKIVDALDAF--GISRRREPVLAIGG- 97 (354)
T ss_pred CCeEEEEECccHHH----HHHHHHHHHHHhcCCceEEEEeCCCC-CCCCHHHHHHHHHHHHHc--CCCCCCCEEEEECC-
Confidence 46788888765532 244566666654321 2211111111 011234445554433211 11223 78888888
Q ss_pred hhHHHHHHHHhhccccCCCCCCcEEeecC
Q 011722 158 GTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (479)
Q Consensus 158 GTv~~Vl~~l~~~~~~~~~~~~plgiIPl 186 (479)
|++..++..+.... ...+|+-.||.
T Consensus 98 G~v~D~ak~~A~~~----~rg~p~i~VPT 122 (354)
T cd08199 98 GVLTDVAGLAASLY----RRGTPYVRIPT 122 (354)
T ss_pred cHHHHHHHHHHHHh----cCCCCEEEEcC
Confidence 89999998876321 24678888887
No 96
>PLN00180 NDF6 (NDH-dependent flow 6); Provisional
Probab=52.73 E-value=3 Score=37.67 Aligned_cols=16 Identities=44% Similarity=0.680 Sum_probs=12.6
Q ss_pred EEEEcCchhHHHHHHH
Q 011722 151 IVVAGGDGTVGWVLGS 166 (479)
Q Consensus 151 Vvv~GGDGTv~~Vl~~ 166 (479)
-=-.|||||++|+-+-
T Consensus 128 YRgdGGDGT~hW~Yd~ 143 (180)
T PLN00180 128 YRGDGGDGTGHWVYER 143 (180)
T ss_pred hcccCCCCceeeEeeh
Confidence 3456999999999754
No 97
>PTZ00286 6-phospho-1-fructokinase; Provisional
Probab=49.86 E-value=47 Score=35.83 Aligned_cols=51 Identities=33% Similarity=0.416 Sum_probs=35.6
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc---cccCC
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS---RSFGW 198 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA---rslg~ 198 (479)
.+-+.++++|||||..-+..--..... +....++--||-==-||+. +++|.
T Consensus 175 ~~I~~L~vIGGdgT~~~A~~L~ee~~~--~g~~I~VIGIPKTIDNDI~~td~S~GF 228 (459)
T PTZ00286 175 HGINILFTLGGDGTHRGALAIYKELRR--RKLNISVVGIPKTIDNDIPIIDESFGF 228 (459)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHHHH--hCCCceEEEeccccCCCCCCcccCcCc
Confidence 355799999999999866532221110 1245788889999999997 66776
No 98
>COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]
Probab=49.65 E-value=4.4 Score=37.77 Aligned_cols=34 Identities=18% Similarity=0.119 Sum_probs=29.7
Q ss_pred hheehhhhcCCcc-eeecccccccccccccchhhh
Q 011722 15 SMIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (479)
Q Consensus 15 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~~ 48 (479)
..++...+.|..| |||..|-+|+-.++.+||...
T Consensus 96 ~~i~~~~~~g~kVvVHC~~GigRSgtviaA~lm~~ 130 (180)
T COG2453 96 DFIEEALSKGKKVVVHCQGGIGRSGTVIAAYLMLY 130 (180)
T ss_pred HHHHHHHhcCCeEEEEcCCCCchHHHHHHHHHHHH
Confidence 4557888888888 999999999999999999875
No 99
>smart00195 DSPc Dual specificity phosphatase, catalytic domain.
Probab=49.45 E-value=4.6 Score=35.35 Aligned_cols=33 Identities=18% Similarity=0.079 Sum_probs=27.9
Q ss_pred heehhhhcCCcc-eeecccccccccccccchhhh
Q 011722 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (479)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~~ 48 (479)
.++..+..|..| |||..|..|+-.++.+||...
T Consensus 70 ~i~~~~~~~~~VlVHC~~G~~RS~~v~~~yl~~~ 103 (138)
T smart00195 70 FIEDAEKKGGKVLVHCQAGVSRSATLIIAYLMKY 103 (138)
T ss_pred HHHHHhcCCCeEEEECCCCCchHHHHHHHHHHHH
Confidence 345667788888 999999999999999998764
No 100
>PRK15454 ethanol dehydrogenase EutG; Provisional
Probab=48.75 E-value=1.1e+02 Score=32.20 Aligned_cols=90 Identities=18% Similarity=0.163 Sum_probs=47.5
Q ss_pred HHHHHHHhhhhcCe-eEEE-eecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhHHHHHHHHhhc--c---
Q 011722 99 LKERLQELMGKEQV-FDLS-EVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVGEL--N--- 171 (479)
Q Consensus 99 ~~~~l~~~L~~~qv-~dl~-~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv~~Vl~~l~~~--~--- 171 (479)
+.+++...|.+..+ +.+. ...|.. .....++.++.+ + ..+.|.||++|| |++-.++..+.-. +
T Consensus 65 ~~~~v~~~L~~~gi~~~~~~~v~~~P----~~~~v~~~~~~~----r-~~~~D~IiavGG-GS~iD~AKaia~~~~~~~~ 134 (395)
T PRK15454 65 MTAGLTRSLAVKGIAMTLWPCPVGEP----CITDVCAAVAQL----R-ESGCDGVIAFGG-GSVLDAAKAVALLVTNPDS 134 (395)
T ss_pred cHHHHHHHHHHcCCeEEEECCCCCCc----CHHHHHHHHHHH----H-hcCcCEEEEeCC-hHHHHHHHHHHHHHhCCCc
Confidence 56667777765432 2221 122222 112334444332 2 246789999999 6666655443211 0
Q ss_pred -------ccCCCCCCcEEeecC--CCccccccccCC
Q 011722 172 -------KQGREPVPPVAIIPL--GTGNDLSRSFGW 198 (479)
Q Consensus 172 -------~~~~~~~~plgiIPl--GTgNDfArslg~ 198 (479)
.....+.+|+..||. |||-...+.--+
T Consensus 135 ~~~~~~~~~~~~~~~P~iaIPTtaGTGSE~t~~avi 170 (395)
T PRK15454 135 TLAEMSETSVLQPRLPLIAIPTTAGTGSETTNVTVI 170 (395)
T ss_pred cHHHHhcccccCCCCCEEEECCCCcchhhhCCeEEE
Confidence 000113468999997 788777665444
No 101
>PF00465 Fe-ADH: Iron-containing alcohol dehydrogenase ; InterPro: IPR001670 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of ethanol to acetaldehyde with the concomitant reduction of NAD. Currently three, structurally and catalytically, different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Iron-containing ADH's have been found in yeast (gene ADH4) [], as well as in Zymomonas mobilis (gene adhB) []. These two iron-containing ADH's are closely related to the following enzymes: Escherichia coli propanediol oxidoreductase (1.1.1.77 from EC) (gene fucO) [], an enzyme involved in the metabolism of fucose and which also seems to contain ferrous ion(s). Clostridium acetobutylicum NADPH- and NADH-dependent butanol dehydrogenases (1.1.1 from EC) (genes adh1, bdhA and bdhB) [], an enzyme which has activity using butanol and ethanol as substrates. E. coli adhE [], an iron-dependent enzyme which harbor three different activities: alcohol dehydrogenase, acetaldehyde dehydrogenase (acetylating) (1.2.1.10 from EC) and pyruvate-formate-lyase deactivase. Bacterial glycerol dehydrogenase (1.1.1.6 from EC) (gene gldA or dhaD) []. Clostridium kluyveri NAD-dependent 4-hydroxybutyrate dehydrogenase (4hbd) (1.1.1.61 from EC). Citrobacter freundii and Klebsiella pneumoniae 1,3-propanediol dehydrogenase (1.1.1.202 from EC) (gene dhaT). Bacillus methanolicus NAD-dependent methanol dehydrogenase (1.1.1.244 from EC) []. E. coli and Salmonella typhimurium ethanolamine utilization protein eutG. E. coli hypothetical protein yiaY. ; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 1RRM_A 2BL4_A 2BI4_A 3BFJ_R 1KQ3_A 1JQ5_A 1JPU_A 1JQA_A 3JZD_A 3UHJ_A ....
Probab=48.68 E-value=49 Score=34.22 Aligned_cols=104 Identities=22% Similarity=0.297 Sum_probs=57.2
Q ss_pred cEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-e-EEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchh
Q 011722 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (479)
Q Consensus 82 ~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~-dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGT 159 (479)
+++||..+ +-... .+.+++...|.+..+ + .+....+.. .....+++++.+. ..+.|.||++|| |+
T Consensus 23 r~lvVt~~-~~~~~--~~~~~v~~~L~~~~i~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~D~IIaiGG-GS 89 (366)
T PF00465_consen 23 RVLVVTDP-SLSKS--GLVDRVLDALEEAGIEVQVFDGVGPNP----TLEDVDEAAEQAR-----KFGADCIIAIGG-GS 89 (366)
T ss_dssp EEEEEEEH-HHHHH--THHHHHHHHHHHTTCEEEEEEEESSS-----BHHHHHHHHHHHH-----HTTSSEEEEEES-HH
T ss_pred CEEEEECc-hHHhC--ccHHHHHHHHhhCceEEEEEecCCCCC----cHHHHHHHHHHHH-----hcCCCEEEEcCC-CC
Confidence 88999987 44322 267788887754321 1 122122222 1234455544432 246789999999 77
Q ss_pred HHHHHHHHhhcccc-------------CCCCCCcEEeecC--CCccccccccCC
Q 011722 160 VGWVLGSVGELNKQ-------------GREPVPPVAIIPL--GTGNDLSRSFGW 198 (479)
Q Consensus 160 v~~Vl~~l~~~~~~-------------~~~~~~plgiIPl--GTgNDfArslg~ 198 (479)
+-.++..+.-+... ...+.+|+..||. |||-.+.+...+
T Consensus 90 ~~D~aK~va~~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTt~gtGsE~t~~avi 143 (366)
T PF00465_consen 90 VMDAAKAVALLLANPGDLRDLLGKGPPPTKPALPLIAIPTTAGTGSEVTPYAVI 143 (366)
T ss_dssp HHHHHHHHHHHHTSSSCGGGGGCECSCCSS--SEEEEEESSSSSSGCCSSEEEE
T ss_pred cCcHHHHHHhhccCCCcHHHHHhhccccccCCCcEEEeeCCccccccccccccc
Confidence 76666655332110 0122379999997 677666655443
No 102
>cd08178 AAD_C C-terminal alcohol dehydrogenase domain of the acetaldehyde dehydrogenase-alcohol dehydrogenase bifunctional two-domain protein (AAD). Alcohol dehydrogenase domain located on the C-terminal of a bifunctional two-domain protein. The N-terminal of the protein contains an acetaldehyde-CoA dehydrogenase domain. This protein is involved in pyruvate metabolism. Pyruvate is converted to acetyl-CoA and formate by pyruvate formate-lysase (PFL). Under anaerobic condition, acetyl-CoA is reduced to acetaldehyde and ethanol by this two-domain protein. Acetyl-CoA is first converted into an enzyme-bound thiohemiacetal by the N-terminal acetaldehyde dehydrogenase domain. The enzyme-bound thiohemiacetal is subsequently reduced by the C-terminal NAD+-dependent alcohol dehydrogenase domain. In E. coli, this protein is called AdhE and was shown pyruvate formate-lysase (PFL) deactivase activity, which is involved in the inactivation of PFL, a key enzyme in anaerobic metabolism. In Escherichi
Probab=47.73 E-value=63 Score=34.01 Aligned_cols=103 Identities=15% Similarity=0.158 Sum_probs=54.0
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEE---eecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCc
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLS---EVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~---~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGD 157 (479)
++++|+.-+..-. ....+++...|.... +++. ...|.. .....++.++.+ + ..+.|.||++||
T Consensus 22 ~k~liVtd~~~~~---~g~~~~v~~~L~~~g-i~~~~f~~v~~~p----~~~~v~~~~~~~----~-~~~~D~IIaiGG- 87 (398)
T cd08178 22 KRAFIVTDRFMVK---LGYVDKVIDVLKRRG-VETEVFSDVEPDP----SLETVRKGLELM----N-SFKPDTIIALGG- 87 (398)
T ss_pred CeEEEEcChhHHh---CccHHHHHHHHHHCC-CeEEEecCCCCCc----CHHHHHHHHHHH----H-hcCCCEEEEeCC-
Confidence 6777776443211 125666777776542 2221 222222 113334444332 2 245789999999
Q ss_pred hhHHHHHHHHhhcc--c-----------c----------CCCCCCcEEeecC--CCccccccccC
Q 011722 158 GTVGWVLGSVGELN--K-----------Q----------GREPVPPVAIIPL--GTGNDLSRSFG 197 (479)
Q Consensus 158 GTv~~Vl~~l~~~~--~-----------~----------~~~~~~plgiIPl--GTgNDfArslg 197 (479)
|++..++..+.-.. . . .....+|+..||. |||-...+..-
T Consensus 88 GS~iD~AK~iA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~I~VPTTagTGSE~t~~av 152 (398)
T cd08178 88 GSPMDAAKIMWLFYEHPEVDFEDLAQKFMDIRKRIYKFPKLGKKAKLVAIPTTSGTGSEVTPFAV 152 (398)
T ss_pred ccHHHHHHHHHHHHhCCCcchhHhhhhhcccccccccccccCCCCCEEEeCCCCcccccccCeEE
Confidence 77777776653110 0 0 0013468999997 78876654443
No 103
>cd08191 HHD 6-hydroxyhexanoate dehydrogenase (HHD) catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate. 6-hydroxyhexanoate dehydrogenase (HHD). The 6-hydroxyhexanoate dehydrogenase catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate. Some bacteria can grow on cyclic ketones, cyclohexylamine, and alcohols as sole carbon source. Cyclohexylamine is an insecticide and antiseptic in various industries and is considered a possible environmental pollutant. The degradation of these chemical compounds are through the cyclohexanol and cyclohexanone biological oxidation pathway. The intermediates of this pathway include cyclohexanol, cyclohexanone, e-caprolactone, 6-hydroxyhexanoate, 6-oxohexanoate and adipate. The 6-hydroxyhexanoate dehydrogenase catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate.
Probab=46.88 E-value=68 Score=33.58 Aligned_cols=102 Identities=20% Similarity=0.256 Sum_probs=54.0
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEE---eecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCc
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLS---EVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~---~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGD 157 (479)
++++|+..+.... ...++++...|.+.. +++. ...|.. + .....+.++.+ + ..+.|.||++||
T Consensus 23 ~~~livt~~~~~~---~~~~~~v~~~L~~~~-~~~~~f~~v~~~~--~--~~~v~~~~~~~----~-~~~~D~IIaiGG- 88 (386)
T cd08191 23 SRALIVTDERMAG---TPVFAELVQALAAAG-VEVEVFDGVLPDL--P--RSELCDAASAA----A-RAGPDVIIGLGG- 88 (386)
T ss_pred CeEEEEECcchhh---cchHHHHHHHHHHcC-CeEEEECCCCCCc--C--HHHHHHHHHHH----H-hcCCCEEEEeCC-
Confidence 6788888655443 235666777776542 2221 112111 0 01122222221 2 245689999998
Q ss_pred hhHHHHHHHHhhccc------------cCCCCCCcEEeecC--CCcccccccc
Q 011722 158 GTVGWVLGSVGELNK------------QGREPVPPVAIIPL--GTGNDLSRSF 196 (479)
Q Consensus 158 GTv~~Vl~~l~~~~~------------~~~~~~~plgiIPl--GTgNDfArsl 196 (479)
|++..++..+.-.-. ....+.+|+..||. |||-...+.-
T Consensus 89 GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTtagTGSE~t~~a 141 (386)
T cd08191 89 GSCIDLAKIAGLLLAHGGDVRDYYGEFKVPGPVLPLIAVPTTAGTGSEVTPVA 141 (386)
T ss_pred chHHHHHHHHHHHHhCCCCHHHHhCccccCCCCCCEEEEeCCCcchhhhCCeE
Confidence 888888776642110 00113578999986 6776666543
No 104
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include bacterial ATP-dependent phosphofructokinases. These are allosrterically regulated homotetramers; the subunits are of about 320 amino acids.
Probab=45.18 E-value=1e+02 Score=31.66 Aligned_cols=40 Identities=28% Similarity=0.320 Sum_probs=31.9
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA 193 (479)
.+-+.++++|||||..-+. .|.+ ...|+--||-==-||+.
T Consensus 91 ~~Id~Li~IGGdgs~~~a~-~L~e-------~~i~vigiPkTIDNDi~ 130 (317)
T cd00763 91 HGIDALVVIGGDGSYMGAM-RLTE-------HGFPCVGLPGTIDNDIP 130 (317)
T ss_pred cCCCEEEEECCchHHHHHH-HHHH-------cCCCEEEecccccCCCC
Confidence 4567999999999987765 3443 35889999999999997
No 105
>PF12219 End_tail_spike: Catalytic domain of bacteriophage endosialidase; InterPro: IPR024430 This entry represents the C-terminal domain of endosialidases which is approximately 160 amino acids in length. There are two conserved sequence motifs: VSR and YGA. The endosialidase protein forms homotrimeric molecules and this domain complexes into a tail-spike stalk. The stalk region folds in a triple beta-helix that is interrupted by a small triple beta-prism domain. The tail-spike is a multifunctional protein device used by the phage to fulfil the following functions: (i) to adsorb to the bacterial polySia capsule (ii) to de-polymerise the capsule to gain access to the outer bacterial membrane, and finally (iii) to mediate tight adhesion to the membrane, a prerequisite for the initiation of the infection cycle [].; PDB: 3JU4_A 3GW6_A 3GVL_A 3GVK_B 3GVJ_A 1V0E_B 1V0F_E.
Probab=44.42 E-value=12 Score=33.28 Aligned_cols=14 Identities=43% Similarity=0.890 Sum_probs=11.1
Q ss_pred ccEEEEEcCchhHH
Q 011722 148 KMRIVVAGGDGTVG 161 (479)
Q Consensus 148 ~~~Vvv~GGDGTv~ 161 (479)
..|+|+||||||-+
T Consensus 85 gQRlIvsGGegtss 98 (160)
T PF12219_consen 85 GQRLIVSGGEGTSS 98 (160)
T ss_dssp G-EEEEESSSSSSG
T ss_pred ccEEEEeCCCCccc
Confidence 35999999999954
No 106
>cd08190 HOT Hydroxyacid-oxoacid transhydrogenase (HOT) involved in gamma-hydroxybutyrate metabolism. Hydroxyacid-oxoacid transhydrogenase (HOT), also known as D-2-hydroxyglutarate transhydrogenase. It catalyzes the conversion of gamma-hydroxybutyrate (GHB) to succinic semialdehyde (SSA), coupled to the stoichiometric conversion of alpha-ketoglutarate to D-2-hydroxyglutarate in gamma-Hydroxybutyrate catabolism. Unlike many other alcohols, which are oxidized by NAD-linked dehydrogenases, gamma-hydroxybutyrate is metabolized to succinate semialdehyde by hydroxyacid-oxoacid transhydrogenase which does not require free NAD or NADP, but instead using alpha -ketoglutarate as an acceptor, converting it to d-2-hydroxyglutarate. Alpha-ketoglutarate serves as an intermediate acceptor to regenerate NAD(P) required for the oxidation of GHB. HOT also catalyzes the reversible oxidation of a hydroxyacid obligatorily coupled to the reduction of an oxoacid, and requires no cofactor. In mammals, the HOT
Probab=44.10 E-value=99 Score=32.75 Aligned_cols=74 Identities=12% Similarity=0.152 Sum_probs=37.7
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEE-EeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDL-SEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl-~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
++++|+.-+..-. ....+++...|....+ +.+ ....|.. ......+.++.+ + ..+.|.||++|| |
T Consensus 24 ~~vlivt~~~~~~---~g~~~~v~~~L~~~gi~~~~f~~v~~~p----~~~~v~~~~~~~----~-~~~~D~IIaiGG-G 90 (414)
T cd08190 24 RRVCLVTDPNLAQ---LPPVKVVLDSLEAAGINFEVYDDVRVEP----TDESFKDAIAFA----K-KGQFDAFVAVGG-G 90 (414)
T ss_pred CeEEEEECcchhh---cchHHHHHHHHHHcCCcEEEeCCCCCCc----CHHHHHHHHHHH----H-hcCCCEEEEeCC-c
Confidence 6777777654322 1245666666654321 221 1222222 113334443332 2 245689999999 6
Q ss_pred hHHHHHHHH
Q 011722 159 TVGWVLGSV 167 (479)
Q Consensus 159 Tv~~Vl~~l 167 (479)
++..++..+
T Consensus 91 SviD~AKai 99 (414)
T cd08190 91 SVIDTAKAA 99 (414)
T ss_pred cHHHHHHHH
Confidence 666665443
No 107
>PRK10586 putative oxidoreductase; Provisional
Probab=43.08 E-value=1.5e+02 Score=30.93 Aligned_cols=89 Identities=13% Similarity=0.080 Sum_probs=49.0
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhH
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv 160 (479)
++++|+.-+++ .......+...|.... +.+...... . ....++++++.. ..+.|.||++|| |++
T Consensus 35 ~~~lvv~g~~~----~~~~~~~~~~~l~~~~-~~~~~~~g~--~--~~~~v~~l~~~~------~~~~d~iiavGG-Gs~ 98 (362)
T PRK10586 35 SRAVWIYGERA----IAAAQPYLPPAFELPG-AKHILFRGH--C--SESDVAQLAAAS------GDDRQVVIGVGG-GAL 98 (362)
T ss_pred CeEEEEEChHH----HHHHHHHHHHHHHHcC-CeEEEeCCC--C--CHHHHHHHHHHh------ccCCCEEEEecC-cHH
Confidence 56777754332 2333455566665432 332211110 0 123445554332 134588999988 888
Q ss_pred HHHHHHHhhccccCCCCCCcEEeecCCCccc
Q 011722 161 GWVLGSVGELNKQGREPVPPVAIIPLGTGND 191 (479)
Q Consensus 161 ~~Vl~~l~~~~~~~~~~~~plgiIPlGTgND 191 (479)
-.+...+... ..+|+..||.=-+++
T Consensus 99 iD~aK~~a~~------~~~p~i~vPT~a~t~ 123 (362)
T PRK10586 99 LDTAKALARR------LGLPFVAIPTIAATC 123 (362)
T ss_pred HHHHHHHHhh------cCCCEEEEeCCcccc
Confidence 8888877652 467999999844443
No 108
>PRK06830 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=42.45 E-value=62 Score=34.77 Aligned_cols=51 Identities=31% Similarity=0.430 Sum_probs=34.3
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc---cccCC
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS---RSFGW 198 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA---rslg~ 198 (479)
.+-+.++++|||||..-+..--..... +....++--||-==-||+. +++|.
T Consensus 171 ~~I~~L~vIGGdgT~~gA~~l~ee~~~--~g~~I~VIGIPKTIDNDi~~td~S~GF 224 (443)
T PRK06830 171 MNINILFVIGGDGTLRGASAIAEEIER--RGLKISVIGIPKTIDNDINFIQKSFGF 224 (443)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHHHH--hCCCceEEEeccccCCCCcCcccCCCH
Confidence 345789999999999766542221110 1245788888988899996 55555
No 109
>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to PFK family that includes ATP- and pyrophosphate (PPi)- dependent phosphofructokinases. Some members evolved by gene duplication and thus have a large C-terminal/N-terminal extension comprising a second PFK domain. Generally, ATP-PFKs are allosteric homotetramers, and PPi-PFKs are dimeric and nonallosteric except for plant PPi-PFKs which are allosteric heterotetramers.
Probab=41.42 E-value=1.1e+02 Score=31.52 Aligned_cols=46 Identities=24% Similarity=0.140 Sum_probs=31.8
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA 193 (479)
.+-+.++++|||||..-+..--..... ...+.++--||-=--||+.
T Consensus 91 ~~I~~Lv~IGGd~s~~~a~~L~e~~~~--~~~~i~vigiPkTIDNDl~ 136 (338)
T cd00363 91 HGIDALVVIGGDGSYTGADLLTEEWPS--KYQGFNVIGLPGTIDNDIK 136 (338)
T ss_pred hCCCEEEEeCCHHHHHHHHHHHHHHHh--cCCCccEEEeeecccCCCc
Confidence 356799999999999766532211111 1356889999977799987
No 110
>TIGR02483 PFK_mixed phosphofructokinase. Members of this family that are characterized, save one, are phosphofructokinases dependent on pyrophosphate (EC 2.7.1.90) rather than ATP (EC 2.7.1.11). The exception is one of three phosphofructokinases from Streptomyces coelicolor. Family members are both bacterial and archaeal.
Probab=41.42 E-value=1.2e+02 Score=31.05 Aligned_cols=45 Identities=31% Similarity=0.516 Sum_probs=33.4
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc---cccCC
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS---RSFGW 198 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA---rslg~ 198 (479)
.+-+.++++|||||..-+. .|.+ ...++--||-==-||+. .++|.
T Consensus 93 ~~Id~LivIGGdgS~~~a~-~L~~-------~gi~vigiPkTIDNDl~gtd~tiGf 140 (324)
T TIGR02483 93 LGLDALIAIGGDGTLGIAR-RLAD-------KGLPVVGVPKTIDNDLEATDYTFGF 140 (324)
T ss_pred cCCCEEEEECCchHHHHHH-HHHh-------cCCCEEeeccccCCCCcCCccCcCH
Confidence 3567999999999996554 4544 34788889988899996 45555
No 111
>PRK03202 6-phosphofructokinase; Provisional
Probab=40.28 E-value=1.2e+02 Score=31.08 Aligned_cols=40 Identities=30% Similarity=0.286 Sum_probs=31.7
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA 193 (479)
.+-+.++++|||||..-+.. |.+ ...++--||-==-||+.
T Consensus 92 ~~Id~Li~IGGd~s~~~a~~-L~e-------~~i~vigiPkTIDNDl~ 131 (320)
T PRK03202 92 LGIDALVVIGGDGSYMGAKR-LTE-------HGIPVIGLPGTIDNDIA 131 (320)
T ss_pred cCCCEEEEeCChHHHHHHHH-HHh-------cCCcEEEecccccCCCC
Confidence 35679999999999987654 443 36788889988899997
No 112
>COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family [Energy production and conversion]
Probab=38.93 E-value=85 Score=32.44 Aligned_cols=79 Identities=16% Similarity=0.254 Sum_probs=50.9
Q ss_pred CCCCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcC-
Q 011722 78 PPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG- 156 (479)
Q Consensus 78 ~~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GG- 156 (479)
+.-+++++.+--.|=++.| +.+++.+.|...+++++.-+.|.+.++.- ..+.++++ .++-+-|+++||
T Consensus 27 ~~~~kVLi~YGGGSIKrnG--vydqV~~~Lkg~~~~E~~GVEPNP~~~Tv-~kaV~i~k--------ee~idflLAVGGG 95 (384)
T COG1979 27 PKDAKVLIVYGGGSIKKNG--VYDQVVEALKGIEVIEFGGVEPNPRLETL-MKAVEICK--------EENIDFLLAVGGG 95 (384)
T ss_pred cccCeEEEEecCccccccc--hHHHHHHHhcCceEEEecCCCCCchHHHH-HHHHHHHH--------HcCceEEEEecCc
Confidence 3348999999655555554 78888888887777888877787643321 22333433 245678888888
Q ss_pred ---chhHHHHHHHH
Q 011722 157 ---DGTVGWVLGSV 167 (479)
Q Consensus 157 ---DGTv~~Vl~~l 167 (479)
|||=-=.+.+.
T Consensus 96 SViD~tK~IAa~a~ 109 (384)
T COG1979 96 SVIDGTKFIAAAAK 109 (384)
T ss_pred chhhhHHHHHhhcc
Confidence 66654444433
No 113
>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like.
Probab=38.67 E-value=9 Score=33.26 Aligned_cols=32 Identities=22% Similarity=0.102 Sum_probs=26.4
Q ss_pred eehhhhcCCcc-eeecccccccccccccchhhh
Q 011722 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (479)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~~ 48 (479)
++..+..|..+ |||..|..|+..++.+|+...
T Consensus 74 i~~~~~~~~~vlVHC~~G~~Rs~~~~~~~l~~~ 106 (139)
T cd00127 74 IDDAREKGGKVLVHCLAGVSRSATLVIAYLMKT 106 (139)
T ss_pred HHHHHhcCCcEEEECCCCCchhHHHHHHHHHHH
Confidence 45556677888 999999999999999998764
No 114
>cd08188 Fe-ADH4 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and is belonged to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized. Their specific function is unknown.
Probab=37.89 E-value=1.5e+02 Score=30.80 Aligned_cols=102 Identities=22% Similarity=0.281 Sum_probs=51.6
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEE-EeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCc
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDL-SEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl-~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGD 157 (479)
.++++|+.-+..-. ....+++...|....+ +.+ ....+.. .....++.++.+ + ..+.|.||++||
T Consensus 28 ~~~~livt~~~~~~---~~~~~~v~~~L~~~~~~~~~~~~v~~~p----~~~~v~~~~~~~----~-~~~~d~IIaiGG- 94 (377)
T cd08188 28 AKKVLLVSDPGVIK---AGWVDRVIESLEEAGLEYVVFSDVSPNP----RDEEVMAGAELY----L-ENGCDVIIAVGG- 94 (377)
T ss_pred CCeEEEEeCcchhh---CccHHHHHHHHHHcCCeEEEeCCCCCCC----CHHHHHHHHHHH----H-hcCCCEEEEeCC-
Confidence 36777776543321 1245566666654321 221 1122221 112233333322 2 245789999999
Q ss_pred hhHHHHHHHHhh---cc-------c--cCCCCCCcEEeecC--CCcccccc
Q 011722 158 GTVGWVLGSVGE---LN-------K--QGREPVPPVAIIPL--GTGNDLSR 194 (479)
Q Consensus 158 GTv~~Vl~~l~~---~~-------~--~~~~~~~plgiIPl--GTgNDfAr 194 (479)
|++-.++..+.- .. . ....+.+|+..||. |||-..++
T Consensus 95 GsviD~AK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTT~gTgSE~t~ 145 (377)
T cd08188 95 GSPIDCAKGIGIVASNGGHILDFEGVDKITRPLPPLICIPTTAGSGADVSQ 145 (377)
T ss_pred chHHHHHHHHHHHHHCCCCHHHHhCcccccCCCCCEEEECCCCccccccCC
Confidence 777777744321 00 0 00112468999997 88866665
No 115
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include eukaryotic ATP-dependent phosphofructokinases. These have evolved from the bacterial PFKs by gene duplication and fusion events and exhibit complex allosteric behavior.
Probab=37.70 E-value=1.2e+02 Score=34.83 Aligned_cols=47 Identities=21% Similarity=0.273 Sum_probs=32.9
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA 193 (479)
.+-+.++++|||||..-+.. |.+....-.....|+-.||.==-||+.
T Consensus 477 ~~Id~LivIGGdgs~~~a~~-L~~~~~~y~~~~i~vVgIPkTIDNDv~ 523 (762)
T cd00764 477 YGIDGLIIVGGFEAYKGLLQ-LREAREQYEEFCIPMVLIPATVSNNVP 523 (762)
T ss_pred cCCCEEEEECChhHHHHHHH-HHHHHhhCCCCCccEEEecccccCCCC
Confidence 45679999999999986653 332110001246889999999999996
No 116
>PRK14021 bifunctional shikimate kinase/3-dehydroquinate synthase; Provisional
Probab=37.69 E-value=2e+02 Score=31.71 Aligned_cols=43 Identities=23% Similarity=0.051 Sum_probs=30.7
Q ss_pred CccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecC--CCcccccc
Q 011722 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDLSR 194 (479)
Q Consensus 147 ~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPl--GTgNDfAr 194 (479)
..+.||++|| |++..++..+...- ....|+-.+|. -..+|-+-
T Consensus 269 r~D~IIAIGG-Gsv~D~AKfvA~~y----~rGi~~i~vPTTllA~vDss~ 313 (542)
T PRK14021 269 RSDAIVGLGG-GAATDLAGFVAATW----MRGIRYVNCPTSLLAMVDAST 313 (542)
T ss_pred CCcEEEEEcC-hHHHHHHHHHHHHH----HcCCCEEEeCChHHhhhcccc
Confidence 5678888888 99999998886421 14688999987 34444443
No 117
>PLN02564 6-phosphofructokinase
Probab=37.25 E-value=1.3e+02 Score=32.67 Aligned_cols=51 Identities=33% Similarity=0.442 Sum_probs=33.2
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc---cccCC
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS---RSFGW 198 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA---rslg~ 198 (479)
.+-+.++++|||||..-+..-...... ...+.++--||-==-||+. +++|.
T Consensus 175 ~~Id~LivIGGDGS~~gA~~L~e~~~~--~g~~i~VIGIPKTIDNDI~~tD~T~GF 228 (484)
T PLN02564 175 RGINQVYIIGGDGTQKGASVIYEEIRR--RGLKVAVAGIPKTIDNDIPVIDKSFGF 228 (484)
T ss_pred hCCCEEEEECCchHHHHHHHHHHHHHH--cCCCceEEEecccccCCCcCcccCCCH
Confidence 356799999999999766533221110 1234557778988899997 45554
No 118
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=35.71 E-value=1.5e+02 Score=34.56 Aligned_cols=74 Identities=16% Similarity=0.195 Sum_probs=40.2
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhh--hcCeeEEE---eecCccceechhhHHHHHHhcchhhhhccCCccEEEEE
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMG--KEQVFDLS---EVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVA 154 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~--~~qv~dl~---~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~ 154 (479)
.++++|+..+..-. . ...+++...|. .. .+++. ...|.. .....+++++.+. ..+.|.||++
T Consensus 480 ~~~~lvVtd~~~~~-~--g~~~~v~~~L~~~~~-~i~~~~~~~v~~np----~~~~v~~~~~~~~-----~~~~D~IIai 546 (862)
T PRK13805 480 KKRAFIVTDRFMVE-L--GYVDKVTDVLKKREN-GVEYEVFSEVEPDP----TLSTVRKGAELMR-----SFKPDTIIAL 546 (862)
T ss_pred CCEEEEEECcchhh-c--chHHHHHHHHhcccC-CCeEEEeCCCCCCc----CHHHHHHHHHHHH-----hcCCCEEEEe
Confidence 46788887654322 1 25666777776 22 12222 222322 1233444443332 2456899999
Q ss_pred cCchhHHHHHHHH
Q 011722 155 GGDGTVGWVLGSV 167 (479)
Q Consensus 155 GGDGTv~~Vl~~l 167 (479)
|| |++..++..+
T Consensus 547 GG-GSviD~AK~i 558 (862)
T PRK13805 547 GG-GSPMDAAKIM 558 (862)
T ss_pred CC-chHHHHHHHH
Confidence 98 7777777665
No 119
>PRK06756 flavodoxin; Provisional
Probab=35.32 E-value=2.5e+02 Score=24.71 Aligned_cols=28 Identities=11% Similarity=0.278 Sum_probs=20.4
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhc
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKE 110 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~ 110 (479)
++++||+=. ..|+.+++.+.+.+.|...
T Consensus 2 mkv~IiY~S--~tGnTe~vA~~ia~~l~~~ 29 (148)
T PRK06756 2 SKLVMIFAS--MSGNTEEMADHIAGVIRET 29 (148)
T ss_pred ceEEEEEEC--CCchHHHHHHHHHHHHhhc
Confidence 578888855 4456778888888888654
No 120
>cd08196 DHQS-like1 Dehydroquinate synthase (DHQS)-like. DHQS catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis. Dehydroquinate synthase-like proteins. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. The activity of DHQS requires NAD as cofactor. Proteins of this family share sequence similarity and functional motifs with that of dehydroquinate synthase, but the specific function has not been characterized.
Probab=35.23 E-value=2.2e+02 Score=29.51 Aligned_cols=91 Identities=15% Similarity=0.233 Sum_probs=47.8
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhH
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv 160 (479)
++++|+..+.-.. -..+.+.+.|.....+-+....+.. ....+.++.+.+.+ ......+.||+.|| |++
T Consensus 20 ~r~lIVtD~~v~~----l~~~~l~~~L~~~~~~~~~~~e~~k----~l~~v~~~~~~~~~--~~~~r~d~iIaiGG-Gsv 88 (346)
T cd08196 20 ENDVFIVDANVAE----LYRDRLDLPLDAAPVIAIDATEENK----SLEAVSSVIESLRQ--NGARRNTHLVAIGG-GII 88 (346)
T ss_pred CeEEEEECccHHH----HHHHHHHHHhcCCeEEEeCCCCCCC----CHHHHHHHHHHHHH--cCCCCCcEEEEECC-hHH
Confidence 6788888775532 2566677766432222222222222 22344444433321 01233478888888 888
Q ss_pred HHHHHHHhhccccCCCCCCcEEeecC
Q 011722 161 GWVLGSVGELNKQGREPVPPVAIIPL 186 (479)
Q Consensus 161 ~~Vl~~l~~~~~~~~~~~~plgiIPl 186 (479)
..++..+...- ....|+-.||.
T Consensus 89 ~D~ak~vA~~~----~rgi~~i~iPT 110 (346)
T cd08196 89 QDVTTFVASIY----MRGVSWSFVPT 110 (346)
T ss_pred HHHHHHHHHHH----HcCCCeEEecc
Confidence 88887775321 13446666664
No 121
>PRK06555 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated
Probab=34.85 E-value=1.7e+02 Score=31.17 Aligned_cols=46 Identities=20% Similarity=0.084 Sum_probs=31.8
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA 193 (479)
.+-+.++++|||||..-+..--..... .....++--||-==-||+.
T Consensus 111 ~~Id~Li~IGGdgS~~~a~~L~~~~~~--~g~~i~vvgIPkTIDNDl~ 156 (403)
T PRK06555 111 DGVDILHTIGGDDTNTTAADLAAYLAE--NGYDLTVVGLPKTIDNDVV 156 (403)
T ss_pred cCCCEEEEECChhHHHHHHHHHHHHHH--hCCCceEEEeeeeeeCCCC
Confidence 356789999999998766532211110 0246889999998999995
No 122
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=34.74 E-value=2e+02 Score=26.46 Aligned_cols=76 Identities=16% Similarity=0.214 Sum_probs=46.8
Q ss_pred hHHHHHHHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhHHHHHHHHhhccccCC
Q 011722 97 PELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGR 175 (479)
Q Consensus 97 ~~~~~~l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~ 175 (479)
-...++....|....+ ||+.+...+ +.+..+.++++++.+ ..-.-.|.++|+.+-+.-|+.++.
T Consensus 11 ~~~~~~a~~~L~~~gi~~dv~V~SaH----Rtp~~~~~~~~~a~~----~g~~viIa~AG~aa~Lpgvva~~t------- 75 (156)
T TIGR01162 11 LPTMKKAADILEEFGIPYELRVVSAH----RTPELMLEYAKEAEE----RGIKVIIAGAGGAAHLPGMVAALT------- 75 (156)
T ss_pred HHHHHHHHHHHHHcCCCeEEEEECcc----cCHHHHHHHHHHHHH----CCCeEEEEeCCccchhHHHHHhcc-------
Confidence 3466777777766554 888775443 356677778766531 112335667788888888887774
Q ss_pred CCCCcEEeecCCCc
Q 011722 176 EPVPPVAIIPLGTG 189 (479)
Q Consensus 176 ~~~~plgiIPlGTg 189 (479)
..|+==+|.-++
T Consensus 76 --~~PVIgvP~~~~ 87 (156)
T TIGR01162 76 --PLPVIGVPVPSK 87 (156)
T ss_pred --CCCEEEecCCcc
Confidence 345544565443
No 123
>KOG1719 consensus Dual specificity phosphatase [Defense mechanisms]
Probab=34.18 E-value=16 Score=33.57 Aligned_cols=33 Identities=15% Similarity=0.134 Sum_probs=29.1
Q ss_pred heehhhhcCCcc-eeecccccccccccccchhhh
Q 011722 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (479)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~~ 48 (479)
.||+.-.-|.+| |||--||.|+..+...||...
T Consensus 101 Fi~k~asLGktvYVHCKAGRtRSaTvV~cYLmq~ 134 (183)
T KOG1719|consen 101 FIHKNASLGKTVYVHCKAGRTRSATVVACYLMQH 134 (183)
T ss_pred HHHhccccCCeEEEEecCCCccchhhhhhhhhhh
Confidence 456777889999 999999999999999999864
No 124
>cd08193 HVD 5-hydroxyvalerate dehydrogenase (HVD) catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor. 5-hydroxyvalerate dehydrogenase (HVD) is an iron-containing (type III) NAD-dependent alcohol dehydrogenase. It plays a role in the cyclopentanol metabolism biochemical pathway. It catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor. This cyclopentanol (cpn) degradation pathway is present in some bacteria which can use cyclopentanol as sole carbon source. In Comamonas sp. strain NCIMB 9872, this enzyme is encoded by the CpnD gene.
Probab=33.52 E-value=1.6e+02 Score=30.57 Aligned_cols=102 Identities=19% Similarity=0.234 Sum_probs=52.4
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eE-EEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCc
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FD-LSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~d-l~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGD 157 (479)
.++++|+.-+.-.. ....+++...|.+..+ +. +....+.. ......+.++.+. ..+.|.||++||
T Consensus 26 ~~~~livt~~~~~~---~~~~~~v~~~L~~~~~~~~~~~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIaiGG- 92 (376)
T cd08193 26 AKRVLVVTDPGILK---AGLIDPLLASLEAAGIEVTVFDDVEADP----PEAVVEAAVEAAR-----AAGADGVIGFGG- 92 (376)
T ss_pred CCeEEEEcCcchhh---CccHHHHHHHHHHcCCeEEEECCCCCCc----CHHHHHHHHHHHH-----hcCCCEEEEeCC-
Confidence 36777776543211 1245566666754421 21 11122221 1233445544432 245789999999
Q ss_pred hhHHHHHHHHhhccc------------cCCCCCCcEEeecC--CCcccccc
Q 011722 158 GTVGWVLGSVGELNK------------QGREPVPPVAIIPL--GTGNDLSR 194 (479)
Q Consensus 158 GTv~~Vl~~l~~~~~------------~~~~~~~plgiIPl--GTgNDfAr 194 (479)
|++..++..+.-.-. .......|+-.||. |||-....
T Consensus 93 Gs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTTagtgSe~t~ 143 (376)
T cd08193 93 GSSMDVAKLVAVLAGSDQPLADMYGVDLVAGPRLPLILVPTTAGTGSEVTP 143 (376)
T ss_pred chHHHHHHHHHHHHHCCCCHHHHhCCCccCCCCCCEEEeCCCCcchHhhCC
Confidence 888887766533210 00023568888886 56654444
No 125
>PRK12613 galactose-6-phosphate isomerase subunit LacA; Provisional
Probab=32.62 E-value=1e+02 Score=27.80 Aligned_cols=38 Identities=18% Similarity=0.222 Sum_probs=25.8
Q ss_pred hHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhc
Q 011722 97 PELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAEL 137 (479)
Q Consensus 97 ~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~ 137 (479)
-++++.+.+.|.+. +|++....|.. ..|+..+..+++.
T Consensus 12 ~~lK~~l~~~L~~~-g~eV~D~G~~~--~dypd~a~~va~~ 49 (141)
T PRK12613 12 NALKELIKSFLQEE-GYDIIDVTDIN--SDFIDNTLAVAKA 49 (141)
T ss_pred HHHHHHHHHHHHHC-CCEEEEcCCCC--CChHHHHHHHHHH
Confidence 56888899998875 58887766632 4466666665543
No 126
>PRK14072 6-phosphofructokinase; Provisional
Probab=32.42 E-value=1.9e+02 Score=30.89 Aligned_cols=51 Identities=24% Similarity=0.231 Sum_probs=33.6
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc---cccCC
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS---RSFGW 198 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA---rslg~ 198 (479)
.+-+.+|++|||||..-+.. |.+.-. ....+.++--||-==-||+. .++|.
T Consensus 102 ~~Id~LivIGGdgS~~~a~~-L~e~~~-~~g~~i~vIgIPkTIDNDl~gtD~t~GF 155 (416)
T PRK14072 102 HDIGYFFYNGGNDSMDTALK-VSQLAK-KMGYPIRCIGIPKTIDNDLPGTDHCPGF 155 (416)
T ss_pred cCCCEEEEECChHHHHHHHH-HHHHHH-HhCCCceEEEeeecccCCCCCCCCCCCh
Confidence 35679999999999976653 222100 00245788889977799998 44454
No 127
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include eukaryotic ATP-dependent phosphofructokinases. These have evolved from the bacterial PFKs by gene duplication and fusion events and exhibit complex allosteric behavior.
Probab=31.37 E-value=1.4e+02 Score=34.43 Aligned_cols=48 Identities=19% Similarity=0.164 Sum_probs=31.2
Q ss_pred CCccEEEEEcCchhHHHHH----------HHHhhccc-----cCCCCCCcEEeecCCCccccc
Q 011722 146 RQKMRIVVAGGDGTVGWVL----------GSVGELNK-----QGREPVPPVAIIPLGTGNDLS 193 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl----------~~l~~~~~-----~~~~~~~plgiIPlGTgNDfA 193 (479)
.+-+.+|++|||||+.-+. ..|.+... .......++--||-==-||++
T Consensus 96 ~~Id~LvvIGGdgSl~gA~~l~~e~~~l~~el~~~g~i~~~~~~~~~~l~vVGiPkTIDNDl~ 158 (762)
T cd00764 96 RGITNLCVIGGDGSLTGADLFRSEWPSLLEELVKDGKITEEEVAKYQHLNIVGMVGSIDNDFC 158 (762)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHhhhHHHHHHHhcCcccHHHHhcCCCceEEEeccceeCCCC
Confidence 4567999999999986654 22222110 011235677778887799997
No 128
>PRK14071 6-phosphofructokinase; Provisional
Probab=31.33 E-value=2e+02 Score=30.03 Aligned_cols=46 Identities=24% Similarity=0.377 Sum_probs=33.3
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc---cccCC
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS---RSFGW 198 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA---rslg~ 198 (479)
.+-+.++++|||||.. .+..|.+ ....++--||-==-||+. +++|.
T Consensus 106 ~~Id~Li~IGGdgS~~-~a~~L~~------~~~i~vIgiPkTIDNDl~~td~t~Gf 154 (360)
T PRK14071 106 LGLDALIGIGGDGSLA-ILRRLAQ------QGGINLVGIPKTIDNDVGATEVSIGF 154 (360)
T ss_pred cCCCEEEEECChhHHH-HHHHHHH------hcCCcEEEecccccCCCcCcccCcCh
Confidence 4567999999999986 3444543 126788889988899995 45555
No 129
>TIGR01118 lacA galactose-6-phosphate isomerase, LacA subunit. This family contains members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=30.83 E-value=1.1e+02 Score=27.56 Aligned_cols=39 Identities=15% Similarity=0.150 Sum_probs=25.3
Q ss_pred hHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhc
Q 011722 97 PELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAEL 137 (479)
Q Consensus 97 ~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~ 137 (479)
-++++.+.+.|... +|++....+.+. ..|+..+.++++.
T Consensus 12 ~~lK~~i~~~L~~~-G~eV~D~G~~~~-~dYpd~a~~va~~ 50 (141)
T TIGR01118 12 KRLKDVIKNFLVDN-GFEVIDVTEGDG-QDFVDVTLAVASE 50 (141)
T ss_pred HHHHHHHHHHHHHC-CCEEEEcCCCCC-CCcHHHHHHHHHH
Confidence 56888898888875 588777666322 3466666555543
No 130
>PRK08621 galactose-6-phosphate isomerase subunit LacA; Reviewed
Probab=30.34 E-value=1.2e+02 Score=27.46 Aligned_cols=38 Identities=16% Similarity=0.213 Sum_probs=24.6
Q ss_pred hHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHh
Q 011722 97 PELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAE 136 (479)
Q Consensus 97 ~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~ 136 (479)
-++++.|.+.|... +|++....+.+. ..|+.-+.++++
T Consensus 12 ~~lK~~l~~~L~~~-G~eV~D~G~~~~-~dYpd~a~~va~ 49 (142)
T PRK08621 12 FELKEVVKDYLEDN-KYEVVDVTEEGA-EDFVDSTLAVAK 49 (142)
T ss_pred HHHHHHHHHHHHHC-CCEEEECCCCCC-CCcHHHHHHHHH
Confidence 56888888888875 588877666321 345555555554
No 131
>COG0337 AroB 3-dehydroquinate synthetase [Amino acid transport and metabolism]
Probab=30.00 E-value=3.5e+02 Score=28.32 Aligned_cols=97 Identities=18% Similarity=0.148 Sum_probs=53.4
Q ss_pred CCCCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEE-EeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcC
Q 011722 78 PPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDL-SEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG 156 (479)
Q Consensus 78 ~~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl-~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GG 156 (479)
....+++|+.|+.=.. -..+++...|.... ++. ...-|.-..+.....+.++-....+ ......+.||+.||
T Consensus 31 ~~~~k~~ivtd~~v~~----~y~~~~~~~l~~~g-~~v~~~~lp~GE~~Ksl~~~~~i~~~ll~--~~~~R~s~iialGG 103 (360)
T COG0337 31 LAGRKVAIVTDETVAP----LYLEKLLATLEAAG-VEVDSIVLPDGEEYKSLETLEKIYDALLE--AGLDRKSTLIALGG 103 (360)
T ss_pred ccCCeEEEEECchhHH----HHHHHHHHHHHhcC-CeeeEEEeCCCcccccHHHHHHHHHHHHH--cCCCCCcEEEEECC
Confidence 3445899999976543 24666777776553 333 2222322233444455554433321 12344578888888
Q ss_pred chhHHHHHHHHhhccccCCCCCCcEEeecC
Q 011722 157 DGTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (479)
Q Consensus 157 DGTv~~Vl~~l~~~~~~~~~~~~plgiIPl 186 (479)
|+|+.++.-..... -...++--||.
T Consensus 104 -GvigDlaGF~Aaty----~RGv~fiqiPT 128 (360)
T COG0337 104 -GVIGDLAGFAAATY----MRGVRFIQIPT 128 (360)
T ss_pred -hHHHHHHHHHHHHH----HcCCCeEeccc
Confidence 99999886654422 13455555553
No 132
>PRK05948 precorrin-2 methyltransferase; Provisional
Probab=29.96 E-value=4.2e+02 Score=25.85 Aligned_cols=36 Identities=19% Similarity=0.273 Sum_probs=23.0
Q ss_pred CCccEEEEEcCchh----HHHHHHHHhhccccCCCCCCcEEeecC
Q 011722 146 RQKMRIVVAGGDGT----VGWVLGSVGELNKQGREPVPPVAIIPL 186 (479)
Q Consensus 146 ~~~~~Vvv~GGDGT----v~~Vl~~l~~~~~~~~~~~~plgiIPl 186 (479)
.+.+.+++..||=+ ..+++..|... ....++=|||.
T Consensus 91 ~g~~v~~l~~GDp~~ys~~~~l~~~l~~~-----~~~~~veivPG 130 (238)
T PRK05948 91 QGEDVAFACEGDVSFYSTFTYLAQTLQEL-----YPQVAIQTIPG 130 (238)
T ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHHhc-----CCCCCEEEECC
Confidence 35678999999954 45555555431 13567778884
No 133
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type. Members of this family are eukaryotic (with one exception) ATP-dependent 6-phosphofructokinases (EC 2.7.1.11) in which two tandem copies of the phosphofructokinase are found. Members are found, often including several isozymes, in animals and fungi and in the bacterium Propionibacterium acnes KPA171202 (a human skin commensal).
Probab=29.03 E-value=1.5e+02 Score=34.07 Aligned_cols=48 Identities=21% Similarity=0.190 Sum_probs=30.4
Q ss_pred CCccEEEEEcCchhHHHHHH----------HHhhccc-----cCCCCCCcEEeecCCCccccc
Q 011722 146 RQKMRIVVAGGDGTVGWVLG----------SVGELNK-----QGREPVPPVAIIPLGTGNDLS 193 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~----------~l~~~~~-----~~~~~~~plgiIPlGTgNDfA 193 (479)
.+-+.+|++|||||+.-+.. .|.+... .......++--||-==-||++
T Consensus 93 ~~Id~LivIGGdgS~~~a~~l~~e~~~~~~~l~~~~~i~~~~~~~~~~l~vvGiPkTIDNDl~ 155 (745)
T TIGR02478 93 RGIDNLVVIGGDGSLTGADLFREEWPSLLEELVDTGKITAEQAEEHRHLTIVGLVGSIDNDMC 155 (745)
T ss_pred hCCCEEEEECChhHHHHHHHHHHHhHHHHHHHHHccchhHHHHhcCCCCcEEEEccccccCCC
Confidence 45679999999999866531 2221100 011346788889954589997
No 134
>COG0205 PfkA 6-phosphofructokinase [Carbohydrate transport and metabolism]
Probab=27.95 E-value=1.8e+02 Score=30.31 Aligned_cols=41 Identities=32% Similarity=0.302 Sum_probs=29.8
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA 193 (479)
.+-+.+|++|||||..-..- |.+. -..++-=||-==-||++
T Consensus 93 ~gId~LvvIGGDgS~~gA~~-Lae~------~~i~vVGvPkTIDNDi~ 133 (347)
T COG0205 93 LGIDALVVIGGDGSYTGAAL-LAEE------GGIPVVGVPKTIDNDIS 133 (347)
T ss_pred cCCCEEEEECCCChHHHHHH-HHHh------cCCcEEecCCCccCCCc
Confidence 45679999999999876653 3331 23667777877789998
No 135
>PRK00536 speE spermidine synthase; Provisional
Probab=26.77 E-value=46 Score=33.13 Aligned_cols=19 Identities=21% Similarity=0.165 Sum_probs=13.4
Q ss_pred CccEEEEEcCc-hhHHHHHH
Q 011722 147 QKMRIVVAGGD-GTVGWVLG 165 (479)
Q Consensus 147 ~~~~Vvv~GGD-GTv~~Vl~ 165 (479)
+..++|+.||| ||+.||+.
T Consensus 73 pk~VLIiGGGDGg~~REvLk 92 (262)
T PRK00536 73 LKEVLIVDGFDLELAHQLFK 92 (262)
T ss_pred CCeEEEEcCCchHHHHHHHC
Confidence 44566667778 68888884
No 136
>PTZ00393 protein tyrosine phosphatase; Provisional
Probab=26.42 E-value=18 Score=35.48 Aligned_cols=30 Identities=7% Similarity=-0.172 Sum_probs=25.8
Q ss_pred ehhhhcCCcc-eeecccccccccccccchhh
Q 011722 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRV 47 (479)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~ 47 (479)
+..++.|..| |||.-|.+|+-+++..||..
T Consensus 164 ~~~l~~g~~VaVHC~AGlGRTGtl~AayLI~ 194 (241)
T PTZ00393 164 NNVIKNNRAVAVHCVAGLGRAPVLASIVLIE 194 (241)
T ss_pred HHHHhcCCeEEEECCCCCCHHHHHHHHHHHH
Confidence 4555678788 99999999999999999975
No 137
>PLN02884 6-phosphofructokinase
Probab=25.31 E-value=2.9e+02 Score=29.47 Aligned_cols=51 Identities=29% Similarity=0.384 Sum_probs=33.8
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc---cccCC
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS---RSFGW 198 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA---rslg~ 198 (479)
.+-+.++++|||||..-+..--..... .....++--||-==-||+. +++|.
T Consensus 142 ~~Id~LivIGGdgS~~~a~~L~~~~~~--~g~~i~vIGIPkTIDNDi~~tD~TiGF 195 (411)
T PLN02884 142 RGINMLFVLGGNGTHAGANAIHNECRK--RKMKVSVVGVPKTIDNDILLMDKTFGF 195 (411)
T ss_pred cCCCEEEEECCchHHHHHHHHHHHHHH--cCCCceEEeccccccCCCcCcccCCCH
Confidence 456799999999999766532211100 1245788889988899996 44554
No 138
>PF00365 PFK: Phosphofructokinase; InterPro: IPR000023 The enzyme-catalysed transfer of a phosphoryl group from ATP is an important reaction in a wide variety of biological processes []. One enzyme that utilises this reaction is phosphofructokinase (PFK), which catalyses the phosphorylation of fructose-6-phosphate to fructose-1,6- bisphosphate, a key regulatory step in the glycolytic pathway [, ]. PFK exists as a homotetramer in bacteria and mammals (where each monomer possesses 2 similar domains), and as an octomer in yeast (where there are 4 alpha- (PFK1) and 4 beta-chains (PFK2), the latter, like the mammalian monomers, possessing 2 similar domains []). PFK is ~300 amino acids in length, and structural studies of the bacterial enzyme have shown it comprises two similar (alpha/beta) lobes: one involved in ATP binding and the other housing both the substrate-binding site and the allosteric site (a regulatory binding site distinct from the active site, but that affects enzyme activity). The identical tetramer subunits adopt 2 different conformations: in a 'closed' state, the bound magnesium ion bridges the phosphoryl groups of the enzyme products (ADP and fructose-1,6- bisphosphate); and in an 'open' state, the magnesium ion binds only the ADP [], as the 2 products are now further apart. These conformations are thought to be successive stages of a reaction pathway that requires subunit closure to bring the 2 molecules sufficiently close to react []. Deficiency in PFK leads to glycogenosis type VII (Tauri's disease), an autosomal recessive disorder characterised by severe nausea, vomiting, muscle cramps and myoglobinuria in response to bursts of intense or vigorous exercise []. Sufferers are usually able to lead a reasonably ordinary life by learning to adjust activity levels [].; GO: 0003872 6-phosphofructokinase activity, 0006096 glycolysis, 0005945 6-phosphofructokinase complex; PDB: 3O8O_E 3OPY_H 1PFK_A 2PFK_D 1MTO_F 3U39_C 6PFK_A 4PFK_A 3PFK_A 3HNO_B ....
Probab=24.37 E-value=1.3e+02 Score=30.29 Aligned_cols=42 Identities=29% Similarity=0.307 Sum_probs=31.9
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCcccccc
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSR 194 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfAr 194 (479)
.+-+.++++|||||+..+ ..|.+. ...++-.||-=--||+.-
T Consensus 91 ~~Id~Li~IGG~gs~~~a-~~L~~~------~~i~vigiPkTIDNDi~g 132 (282)
T PF00365_consen 91 LGIDALIVIGGDGSMKGA-HKLSEE------FGIPVIGIPKTIDNDIPG 132 (282)
T ss_dssp TTESEEEEEESHHHHHHH-HHHHHH------HHSEEEEEEEETTSSCTT
T ss_pred hCCCEEEEecCCCHHHHH-HHHHhc------CceEEEEEeccccCCcCC
Confidence 355799999999997765 445532 237899999988999974
No 139
>COG0371 GldA Glycerol dehydrogenase and related enzymes [Energy production and conversion]
Probab=23.68 E-value=3.4e+02 Score=28.41 Aligned_cols=95 Identities=14% Similarity=0.069 Sum_probs=57.4
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEe-ecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchh
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSE-VKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~-~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGT 159 (479)
++.+|+.-+.. .....+++...|...+ |.... ..+.- ..+..+++++.+. ..+.+.||.+|| |+
T Consensus 31 ~~~lvv~g~~~----~~~~~~~~~~~l~~~g-~~~~~~~~~~a----~~~ev~~~~~~~~-----~~~~d~vIGVGG-Gk 95 (360)
T COG0371 31 SRALVVTGENT----YAIAGEKVEKSLKDEG-LVVHVVFVGEA----SEEEVERLAAEAG-----EDGADVVIGVGG-GK 95 (360)
T ss_pred CceEEEEChhH----HHHHHHHHHHHhcccC-cceeeeecCcc----CHHHHHHHHHHhc-----ccCCCEEEEecC-cH
Confidence 56666653332 2345566777776653 22221 11111 2244556654432 145689999998 88
Q ss_pred HHHHHHHHhhccccCCCCCCcEEeecCCCcccccccc
Q 011722 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSF 196 (479)
Q Consensus 160 v~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArsl 196 (479)
+-.++..+... .+.|+-++|.=..+|=.-|-
T Consensus 96 ~iD~aK~~A~~------~~~pfIsvPT~AS~Da~~Sp 126 (360)
T COG0371 96 TIDTAKAAAYR------LGLPFISVPTIASTDAITSP 126 (360)
T ss_pred HHHHHHHHHHH------cCCCEEEecCccccccccCC
Confidence 88998888763 67899999998777754433
No 140
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=23.06 E-value=2.3e+02 Score=28.13 Aligned_cols=29 Identities=21% Similarity=-0.059 Sum_probs=22.7
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecC
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPl 186 (479)
...|.+|.+|| +|+.|++. ...|.-++|.
T Consensus 240 ~~aDl~Is~~G-~T~~E~~a-----------~g~P~i~i~~ 268 (279)
T TIGR03590 240 NEADLAIGAAG-STSWERCC-----------LGLPSLAICL 268 (279)
T ss_pred HHCCEEEECCc-hHHHHHHH-----------cCCCEEEEEe
Confidence 35678999999 99999884 4567777776
No 141
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=22.73 E-value=2.1e+02 Score=25.95 Aligned_cols=59 Identities=24% Similarity=0.355 Sum_probs=37.7
Q ss_pred EEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHc
Q 011722 150 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASA 219 (479)
Q Consensus 150 ~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~ 219 (479)
.-+.++|+ |...++.-+... ...++-+-+|=+|| ||+.+... +....+.+.++++.+..
T Consensus 44 ~n~g~~G~-t~~~~~~~l~~~----~~~~pd~Vii~~G~-ND~~~~~~-----~~~~~~~l~~li~~i~~ 102 (191)
T cd01836 44 RLFAKTGA-TSADLLRQLAPL----PETRFDVAVISIGV-NDVTHLTS-----IARWRKQLAELVDALRA 102 (191)
T ss_pred EEEecCCc-CHHHHHHHHHhc----ccCCCCEEEEEecc-cCcCCCCC-----HHHHHHHHHHHHHHHHh
Confidence 45677888 445666666441 13466788888885 88865321 34566778888887765
No 142
>PF07015 VirC1: VirC1 protein; InterPro: IPR009744 This family consists of several bacterial VirC1 proteins. In Agrobacterium tumefaciens, a cis-active 24-base-pair sequence adjacent to the right border of the T-DNA, called overdrive, stimulates tumour formation by increasing the level of T-DNA processing. It is thought that the virC operon, which enhances T-DNA processing probably, does so because the VirC1 protein interacts with overdrive. It has now been shown that the virC1 gene product binds to overdrive but not to the right border of T-DNA [].
Probab=22.39 E-value=6.7e+02 Score=24.52 Aligned_cols=98 Identities=18% Similarity=0.242 Sum_probs=47.7
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhc-CeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchh
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKE-QVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~-qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGT 159 (479)
+|++.|+|+|.|.|+...+.- |...|..+ +..-+..-.|. .++.+.++.+. +.....+++-|.++| +
T Consensus 1 M~vItf~s~KGGaGKTT~~~~-LAs~la~~G~~V~lIDaDpn-------~pl~~W~~~a~---~~~~~~~~~~V~~~~-e 68 (231)
T PF07015_consen 1 MPVITFASSKGGAGKTTAAMA-LASELAARGARVALIDADPN-------QPLAKWAENAQ---RPGAWPDRIEVYEAD-E 68 (231)
T ss_pred CCeEEEecCCCCCcHHHHHHH-HHHHHHHCCCeEEEEeCCCC-------CcHHHHHHhcc---ccCCCCCCeeEEecc-c
Confidence 478999999999998754433 44444332 22333333343 23455544332 111123344444443 3
Q ss_pred HHHHHHHHhhccccCCCCCCcEEeecC-CCcccccc
Q 011722 160 VGWVLGSVGELNKQGREPVPPVAIIPL-GTGNDLSR 194 (479)
Q Consensus 160 v~~Vl~~l~~~~~~~~~~~~plgiIPl-GTgNDfAr 194 (479)
+.-+-..+.... .....+.+|=+ |++|-++.
T Consensus 69 ~~~l~~~~e~a~----~~~~d~VlvDleG~as~~~~ 100 (231)
T PF07015_consen 69 LTILEDAYEAAE----ASGFDFVLVDLEGGASELND 100 (231)
T ss_pred hhhHHHHHHHHH----hcCCCEEEEeCCCCCchhHH
Confidence 332222222211 12345677777 77776643
No 143
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
Probab=21.98 E-value=1.2e+02 Score=28.20 Aligned_cols=48 Identities=21% Similarity=0.130 Sum_probs=29.2
Q ss_pred hhhHHHHHHhcchhhhhccCCccEEEEEc-C-chhHHHHHHHHhhccccCCCCCCcEEeecCC
Q 011722 127 GLACLEKLAELGDFCAKDTRQKMRIVVAG-G-DGTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (479)
Q Consensus 127 ~~~~~~~la~~~~~~a~~~~~~~~Vvv~G-G-DGTv~~Vl~~l~~~~~~~~~~~~plgiIPlG 187 (479)
+...+++|.+... .+...+|.| | .|.-..+..+..+. ....+||+|-.
T Consensus 17 ~~~~A~~lG~~la-------~~g~~lV~GGg~~GlM~a~a~ga~~~------gG~viGi~p~~ 66 (178)
T TIGR00730 17 YKELAAELGAYLA-------GQGWGLVYGGGRVGLMGAIADAAMEN------GGTAVGVNPSG 66 (178)
T ss_pred HHHHHHHHHHHHH-------HCCCEEEECCChHhHHHHHHHHHHhc------CCeEEEecchh
Confidence 3445556654432 233445555 4 68888888888663 45679999854
No 144
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=21.88 E-value=4.4e+02 Score=25.96 Aligned_cols=30 Identities=23% Similarity=0.288 Sum_probs=25.5
Q ss_pred CccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCC
Q 011722 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (479)
Q Consensus 147 ~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlG 187 (479)
..+.||..||-+|+.|++- .+.|+-+||.-
T Consensus 250 ~ad~vIs~~G~~t~~Ea~~-----------~g~P~l~ip~~ 279 (318)
T PF13528_consen 250 AADLVISKGGYTTISEALA-----------LGKPALVIPRP 279 (318)
T ss_pred hCCEEEECCCHHHHHHHHH-----------cCCCEEEEeCC
Confidence 4579999999999999984 56789999984
No 145
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=21.81 E-value=5.3e+02 Score=28.70 Aligned_cols=90 Identities=18% Similarity=0.189 Sum_probs=55.4
Q ss_pred CCCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCc
Q 011722 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (479)
Q Consensus 79 ~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGD 157 (479)
+...+.||.=..|- ....++....|....+ |++.+...+ +.+..+.++++++.+ ..-...|.++|+.
T Consensus 409 ~~~~v~i~~gs~sd----~~~~~~~~~~l~~~g~~~~~~v~sah----r~~~~~~~~~~~~~~----~~~~v~i~~ag~~ 476 (577)
T PLN02948 409 GTPLVGIIMGSDSD----LPTMKDAAEILDSFGVPYEVTIVSAH----RTPERMFSYARSAHS----RGLQVIIAGAGGA 476 (577)
T ss_pred CCCeEEEEECchhh----HHHHHHHHHHHHHcCCCeEEEEECCc----cCHHHHHHHHHHHHH----CCCCEEEEEcCcc
Confidence 33445566543333 4566777777776654 777765443 356677777766531 1223467888999
Q ss_pred hhHHHHHHHHhhccccCCCCCCcEEeecCCCc
Q 011722 158 GTVGWVLGSVGELNKQGREPVPPVAIIPLGTG 189 (479)
Q Consensus 158 GTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTg 189 (479)
+.+.-|+.++.. .|+==+|..+|
T Consensus 477 ~~l~~~~a~~t~---------~pvi~vp~~~~ 499 (577)
T PLN02948 477 AHLPGMVASMTP---------LPVIGVPVKTS 499 (577)
T ss_pred ccchHHHhhccC---------CCEEEcCCCCC
Confidence 999999987753 45555566544
No 146
>PRK07085 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=21.67 E-value=1.5e+02 Score=32.94 Aligned_cols=50 Identities=24% Similarity=0.260 Sum_probs=33.8
Q ss_pred CccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc-----cccCC
Q 011722 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS-----RSFGW 198 (479)
Q Consensus 147 ~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA-----rslg~ 198 (479)
+-+.+|++|||||..-+..--..... ...+.++--||-==-||+. .++|.
T Consensus 164 ~Id~LviIGGd~S~~~A~~Lae~~~~--~~~~i~VIGIPkTIDNDl~~~~id~s~GF 218 (555)
T PRK07085 164 KLDGLVIIGGDDSNTNAAILAEYFAK--HGCKTQVIGVPKTIDGDLKNEFIETSFGF 218 (555)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHHH--hCCCccEEEEeeeecCCCCCCcccccCCH
Confidence 45789999999998776532211110 1246788888988899996 45665
No 147
>PLN03028 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=21.04 E-value=1.6e+02 Score=33.15 Aligned_cols=50 Identities=16% Similarity=0.195 Sum_probs=33.2
Q ss_pred CccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc-----cccCC
Q 011722 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS-----RSFGW 198 (479)
Q Consensus 147 ~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA-----rslg~ 198 (479)
+-+.+|++|||||..-+.---..... ...+.++--||-==-||+. .++|.
T Consensus 173 ~Id~LvvIGGddS~~~A~~Lae~~~~--~~~~i~VIGIPKTIDNDL~~~~td~s~GF 227 (610)
T PLN03028 173 KLDGLVIIGGVTSNTDAAQLAETFAE--AKCKTKVVGVPVTLNGDLKNQFVETNVGF 227 (610)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHHH--cCCCceEEEeceeeeCCCCCCCCCCCcCH
Confidence 45789999999998766432111100 1246778888887799997 56665
No 148
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type. Members of this family are eukaryotic (with one exception) ATP-dependent 6-phosphofructokinases (EC 2.7.1.11) in which two tandem copies of the phosphofructokinase are found. Members are found, often including several isozymes, in animals and fungi and in the bacterium Propionibacterium acnes KPA171202 (a human skin commensal).
Probab=20.39 E-value=3.7e+02 Score=30.99 Aligned_cols=47 Identities=15% Similarity=0.199 Sum_probs=32.0
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA 193 (479)
.+-+.++++|||||..-+..-- +....-+....|+-.||-==-||+.
T Consensus 477 ~~Id~LivIGGdgs~~~a~~L~-~~~~~~~~~~i~vvgIPkTIDNDi~ 523 (745)
T TIGR02478 477 HKIDGLLIIGGFEAFEALLQLE-QAREKYPAFRIPMVVIPATISNNVP 523 (745)
T ss_pred cCCCEEEEeCChHHHHHHHHHH-HHHhhCCCCCccEEEecccccCCCC
Confidence 3557899999999987655322 2110001245889999999999997
Done!