Query 011722
Match_columns 479
No_of_seqs 252 out of 1654
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 14:00:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011722.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011722hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s40_A Diacylglycerol kinase; 100.0 1.2E-44 4E-49 364.1 24.9 285 78-478 6-298 (304)
2 2qv7_A Diacylglycerol kinase D 100.0 2.9E-40 9.9E-45 336.6 27.0 283 80-477 24-315 (337)
3 2bon_A Lipid kinase; DAG kinas 100.0 7.3E-40 2.5E-44 333.1 21.2 283 79-477 28-316 (332)
4 2an1_A Putative kinase; struct 99.4 2E-12 6.7E-17 128.5 15.4 114 80-222 5-121 (292)
5 1u0t_A Inorganic polyphosphate 99.2 1.8E-10 6.1E-15 115.4 17.1 117 79-222 3-133 (307)
6 1yt5_A Inorganic polyphosphate 99.2 4.6E-11 1.6E-15 116.8 11.3 97 82-222 2-98 (258)
7 2i2c_A Probable inorganic poly 99.2 1.5E-10 5E-15 114.1 13.7 94 82-223 2-96 (272)
8 3afo_A NADH kinase POS5; alpha 97.4 0.00051 1.7E-08 70.6 9.7 125 79-231 40-182 (388)
9 1z0s_A Probable inorganic poly 95.7 0.039 1.3E-06 53.9 9.6 92 81-214 30-121 (278)
10 3pfn_A NAD kinase; structural 94.9 0.27 9.1E-06 49.8 13.0 126 79-232 37-176 (365)
11 3jzd_A Iron-containing alcohol 77.0 5.3 0.00018 40.1 7.7 85 80-186 36-121 (358)
12 3hl0_A Maleylacetate reductase 76.9 6 0.00021 39.5 8.0 85 80-186 34-119 (353)
13 1oj7_A Hypothetical oxidoreduc 68.0 9.9 0.00034 38.6 7.3 102 81-194 51-169 (408)
14 3iv7_A Alcohol dehydrogenase I 66.7 6.5 0.00022 39.5 5.5 84 80-186 37-120 (364)
15 1o2d_A Alcohol dehydrogenase, 66.7 36 0.0012 33.9 11.1 101 81-193 41-157 (371)
16 3uhj_A Probable glycerol dehyd 65.1 11 0.00039 38.0 7.0 85 81-186 53-138 (387)
17 2gru_A 2-deoxy-scyllo-inosose 65.0 8.5 0.00029 38.6 6.0 95 80-186 34-128 (368)
18 1sg6_A Pentafunctional AROM po 62.0 7.7 0.00026 39.3 5.1 102 80-193 36-148 (393)
19 4grd_A N5-CAIR mutase, phospho 57.9 74 0.0025 28.4 10.0 76 81-169 13-90 (173)
20 1xmp_A PURE, phosphoribosylami 57.0 46 0.0016 29.7 8.5 78 80-168 10-88 (170)
21 3okf_A 3-dehydroquinate syntha 56.4 22 0.00074 36.1 7.2 95 79-186 61-157 (390)
22 1u11_A PURE (N5-carboxyaminoim 54.2 1E+02 0.0034 27.8 10.4 78 80-169 21-99 (182)
23 3ce9_A Glycerol dehydrogenase; 52.6 22 0.00075 35.1 6.5 86 81-187 35-121 (354)
24 3bfj_A 1,3-propanediol oxidore 49.2 43 0.0015 33.4 8.1 102 80-193 33-151 (387)
25 1jq5_A Glycerol dehydrogenase; 49.0 28 0.00097 34.5 6.7 85 81-186 32-118 (370)
26 1o4v_A Phosphoribosylaminoimid 48.9 1.2E+02 0.004 27.4 9.9 78 80-168 12-90 (183)
27 3qbe_A 3-dehydroquinate syntha 47.9 27 0.00093 35.0 6.3 93 81-186 44-137 (368)
28 3ors_A N5-carboxyaminoimidazol 47.3 91 0.0031 27.5 8.8 75 82-169 5-81 (163)
29 2hig_A 6-phospho-1-fructokinas 45.4 44 0.0015 34.9 7.5 42 147-193 189-233 (487)
30 1ujn_A Dehydroquinate synthase 44.8 29 0.001 34.3 6.0 89 80-186 28-118 (348)
31 1ta9_A Glycerol dehydrogenase; 44.7 48 0.0017 34.1 7.8 84 81-186 92-177 (450)
32 1vlj_A NADH-dependent butanol 43.7 76 0.0026 31.9 9.0 100 81-193 44-160 (407)
33 3kuu_A Phosphoribosylaminoimid 42.9 1.5E+02 0.005 26.5 9.5 75 82-168 14-89 (174)
34 3clh_A 3-dehydroquinate syntha 41.9 16 0.00054 36.2 3.4 94 80-186 26-119 (343)
35 3s4e_A Dual specificity protei 41.8 4.3 0.00015 34.5 -0.7 33 16-48 73-106 (144)
36 3ox4_A Alcohol dehydrogenase 2 41.7 45 0.0015 33.4 6.8 101 80-193 31-147 (383)
37 3lp6_A Phosphoribosylaminoimid 41.4 95 0.0033 27.7 8.0 76 82-169 9-85 (174)
38 2j16_A SDP-1, tyrosine-protein 40.4 4.8 0.00016 36.3 -0.6 32 17-48 110-142 (182)
39 2ywx_A Phosphoribosylaminoimid 40.4 89 0.003 27.4 7.6 61 97-168 12-73 (157)
40 3oow_A Phosphoribosylaminoimid 39.9 2E+02 0.0068 25.4 10.3 63 97-168 18-82 (166)
41 3ezz_A Dual specificity protei 38.4 5.6 0.00019 33.7 -0.5 33 16-48 73-106 (144)
42 3emu_A Leucine rich repeat and 38.1 5.4 0.00019 34.9 -0.6 32 17-48 80-112 (161)
43 1rrm_A Lactaldehyde reductase; 38.0 45 0.0015 33.2 6.2 99 80-192 31-148 (386)
44 3rg8_A Phosphoribosylaminoimid 37.4 1.9E+02 0.0066 25.3 9.3 65 97-169 15-81 (159)
45 1pfk_A Phosphofructokinase; tr 37.0 1.1E+02 0.0037 30.0 8.6 40 146-193 93-132 (320)
46 3trh_A Phosphoribosylaminoimid 35.0 1.4E+02 0.0048 26.5 8.1 74 82-168 8-83 (169)
47 4b4k_A N5-carboxyaminoimidazol 34.8 2E+02 0.0067 25.8 9.0 77 79-168 20-99 (181)
48 2nt2_A Protein phosphatase sli 34.4 6.3 0.00022 33.5 -0.8 32 17-48 74-106 (145)
49 1zxx_A 6-phosphofructokinase; 33.5 1E+02 0.0035 30.2 7.7 40 146-193 92-131 (319)
50 3rgo_A Protein-tyrosine phosph 30.6 7.7 0.00026 33.0 -0.9 32 17-48 82-114 (157)
51 1zzw_A Dual specificity protei 30.5 8 0.00027 32.9 -0.8 31 17-47 76-107 (149)
52 1wrm_A Dual specificity phosph 29.9 8.3 0.00029 33.6 -0.8 31 18-48 77-108 (165)
53 2hcm_A Dual specificity protei 29.9 8.6 0.00029 33.4 -0.7 31 18-48 83-114 (164)
54 2x9a_A Attachment protein G3P; 29.9 13 0.00043 27.6 0.3 12 149-160 39-50 (65)
55 3hbm_A UDP-sugar hydrolase; PS 29.0 98 0.0034 29.5 6.7 29 146-186 224-252 (282)
56 4hf7_A Putative acylhydrolase; 28.5 37 0.0013 30.2 3.3 59 153-218 57-115 (209)
57 3gw6_A Endo-N-acetylneuraminid 28.3 19 0.00064 34.6 1.3 15 148-162 46-60 (275)
58 3f81_A Dual specificity protei 27.9 10 0.00034 33.5 -0.7 31 18-48 108-140 (183)
59 1xah_A Sadhqs, 3-dehydroquinat 27.5 36 0.0012 33.6 3.3 90 81-186 32-124 (354)
60 2esb_A Dual specificity protei 27.5 10 0.00035 33.9 -0.7 31 18-48 91-122 (188)
61 3cm3_A Late protein H1, dual s 26.5 10 0.00036 33.3 -0.8 33 16-48 100-133 (176)
62 2g6z_A Dual specificity protei 25.7 13 0.00043 34.3 -0.4 32 17-48 76-108 (211)
63 2r0b_A Serine/threonine/tyrosi 25.5 12 0.0004 32.0 -0.7 30 18-47 84-114 (154)
64 3hno_A Pyrophosphate-dependent 25.4 1.8E+02 0.0062 29.5 8.2 46 146-193 103-148 (419)
65 3opy_A 6-phosphofructo-1-kinas 25.0 1.1E+02 0.0038 34.6 6.9 46 147-193 688-733 (989)
66 2y96_A Dual specificity phosph 24.8 12 0.00041 34.5 -0.8 31 18-48 132-164 (219)
67 2hxp_A Dual specificity protei 24.6 12 0.00041 32.2 -0.8 31 18-48 79-110 (155)
68 2e0t_A Dual specificity phosph 24.6 12 0.00041 31.8 -0.8 30 19-48 79-110 (151)
69 2h31_A Multifunctional protein 23.9 2.4E+02 0.0083 28.7 8.7 76 81-169 266-344 (425)
70 2oud_A Dual specificity protei 23.9 13 0.00043 32.9 -0.8 31 17-47 80-111 (177)
71 4a3s_A 6-phosphofructokinase; 23.7 1.4E+02 0.0048 29.1 6.7 44 147-198 93-139 (319)
72 3opy_B 6-phosphofructo-1-kinas 23.5 1.3E+02 0.0045 33.9 7.1 47 146-193 661-707 (941)
73 1yz4_A DUSP15, dual specificit 22.8 15 0.00052 31.6 -0.5 31 18-48 78-109 (160)
74 2img_A Dual specificity protei 22.4 13 0.00046 31.1 -0.9 31 18-48 83-114 (151)
75 2f48_A Diphosphate--fructose-6 22.1 80 0.0027 33.4 4.9 46 146-193 165-210 (555)
76 4erc_A Dual specificity protei 21.6 14 0.00048 31.1 -1.0 30 18-47 82-112 (150)
77 3o8l_A 6-phosphofructokinase, 20.9 1.6E+02 0.0054 32.5 7.0 66 146-217 488-553 (762)
78 2pq5_A Dual specificity protei 20.8 16 0.00056 33.1 -0.7 26 23-48 130-156 (205)
79 2iz6_A Molybdenum cofactor car 20.8 1.2E+02 0.0042 26.8 5.2 49 127-187 30-79 (176)
80 4dxr_B Nesprin-1; beta-sandwic 20.5 30 0.001 22.4 0.7 11 188-198 14-24 (35)
No 1
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=100.00 E-value=1.2e-44 Score=364.14 Aligned_cols=285 Identities=20% Similarity=0.175 Sum_probs=203.9
Q ss_pred CCCCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCc
Q 011722 78 PPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (479)
Q Consensus 78 ~~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGD 157 (479)
.++++++||+||+||++++.+.+++++.+|.+.. +++.. +.|++.+|+.++++++. .+.+.||++|||
T Consensus 6 ~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~-~~~~~-----~~t~~~~~a~~~~~~~~------~~~d~vv~~GGD 73 (304)
T 3s40_A 6 TKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAF-PDLHI-----LHTKEQGDATKYCQEFA------SKVDLIIVFGGD 73 (304)
T ss_dssp CSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHC-SEEEE-----EECCSTTHHHHHHHHHT------TTCSEEEEEECH
T ss_pred CCCCEEEEEECcccCCCchHHHHHHHHHHHHHcC-CeEEE-----EEccCcchHHHHHHHhh------cCCCEEEEEccc
Confidence 3578999999999999998889999999998764 44443 23667899999987753 367899999999
Q ss_pred hhHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEEecCCC
Q 011722 158 GTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSG 237 (479)
Q Consensus 158 GTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~~~~~~~ 237 (479)
|||+||+|+|... ...+|||+||+||+|||||+||+ |.++.++++ .+.+|+.+++|+|.+
T Consensus 74 GTl~~v~~~l~~~-----~~~~~l~iiP~Gt~N~~ar~lg~----~~~~~~a~~----~i~~g~~~~iDlg~v------- 133 (304)
T 3s40_A 74 GTVFECTNGLAPL-----EIRPTLAIIPGGTCNDFSRTLGV----PQNIAEAAK----LITKEHVKPVDVAKA------- 133 (304)
T ss_dssp HHHHHHHHHHTTC-----SSCCEEEEEECSSCCHHHHHTTC----CSSHHHHHH----HHTTCCEEEEEEEEE-------
T ss_pred hHHHHHHHHHhhC-----CCCCcEEEecCCcHHHHHHHcCC----CccHHHHHH----HHHhCCeEEEEEEEE-------
Confidence 9999999999763 36799999999999999999999 556655554 467899999999875
Q ss_pred CcCCCCCCCCCCccccccccccccCCCCCcccceeceEeeEEeeehhHHHhhHhhhhcccCCCccccCCCcceeeecccc
Q 011722 238 EVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSC 317 (479)
Q Consensus 238 ~~~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~rl~nkl~Y~~~~~ 317 (479)
++++|+|++|+||||+|++.++..+ | +..|+++|+..++
T Consensus 134 ---------------------------------~~~~F~~~~~~G~da~v~~~~~~~~--k------~~~G~~~Y~~~~l 172 (304)
T 3s40_A 134 ---------------------------------NGQHFLNFWGIGLVSEVSNNIDAEE--K------AKLGKIGYYLSTI 172 (304)
T ss_dssp ---------------------------------TTEEESSEEEEC--------------------------CHHHHTTTC
T ss_pred ---------------------------------CCEEEEEEEeehHHHHHHHhcCHHH--h------hcCCchHHHHHHH
Confidence 2479999999999999999987533 2 2238899999887
Q ss_pred cccccccccCCCCcccccccceeeeEeeeecCCceEEeeCCcceEEEEeccCCCCcCCCCCCCCCchhhhccCCccccCC
Q 011722 318 TQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHAD 397 (479)
Q Consensus 318 ~~~~f~~~~~~~~~~~~l~~~~~~~i~~v~~~~~e~~~~~~~~~~ivv~N~~~~ggG~~~wg~~~p~~~~~~~~~~a~~d 397 (479)
++++. .+..++++. ++ ++.++ .++.+++|+|++|||||+.++ |+++++
T Consensus 173 ~~l~~-------------~~~~~~~i~-~d---g~~~~--~~~~~v~v~N~~~~Ggg~~~~-------------p~a~~~ 220 (304)
T 3s40_A 173 RTVKN-------------AETFPVKIT-YD---GQVYE--DEAVLVMVGNGEYLGGIPSFI-------------PNVKCD 220 (304)
T ss_dssp -------------------CCEEEEEE-ET---TEEEE--EEEEEEEEECSSEETTEECSS-------------TTCCTT
T ss_pred HHHhh-------------cCCceEEEE-EC---CEEEE--eEEEEEEEECCCcCCCCcccC-------------CCCcCC
Confidence 66421 112344443 32 35443 458899999999999998863 689999
Q ss_pred CCeeEEEEEccchh--HHHHHHhhc------cceEEeeeeEEEEEecCCccccceEEecCCccCCCCCCCCceEEEEEee
Q 011722 398 DGLLEIFGLKQGWH--ASFVMVELI------SAKHIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRV 469 (479)
Q Consensus 398 DGlLeVv~~~~~~~--~~~l~~~l~------~g~~l~q~~~i~I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~v~i~~~ 469 (479)
||+|||+++++... +..++..+. ...+..++++++|++. +++++|+|||++.. ++++|+..
T Consensus 221 DG~Ldv~~v~~~~~~~l~~l~~~~~~g~~~~~~v~~~~~~~v~i~~~----~~~~~~~DGE~~~~-------~p~~i~v~ 289 (304)
T 3s40_A 221 DGTLDIFVVKSTGIQAFKDYIGKKLFEDSNENDIFHVKAKSIHIETE----EEKEVDTDGESSLH-------TPCQIELL 289 (304)
T ss_dssp SSCEEEEEEETTCHHHHHHHTTCCCSSCCCTTTEEEEEESEEEEEES----SCCEEEEC--CCEE-------SSEEEEEE
T ss_pred CCEEEEEEEccCCHHHHHHHHHHHhcCCCCCCcEEEEEccEEEEEeC----CCcEEEeCCCCCCC-------ceEEEEEE
Confidence 99999999998543 222333322 2345679999999986 67999999999863 35999999
Q ss_pred ccccccccC
Q 011722 470 PFQSLMISG 478 (479)
Q Consensus 470 p~~~~~~~~ 478 (479)
|....++..
T Consensus 290 p~al~v~~p 298 (304)
T 3s40_A 290 QGHFTMIYN 298 (304)
T ss_dssp EEEEEEECC
T ss_pred CCeEEEEec
Confidence 998877754
No 2
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=100.00 E-value=2.9e-40 Score=336.64 Aligned_cols=283 Identities=17% Similarity=0.134 Sum_probs=208.3
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchh
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGT 159 (479)
+++++||+||.||++++.+.++++++.|.+.. +++... .|.+.+++.++++++. ..+.+.||++|||||
T Consensus 24 m~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g-~~~~~~-----~t~~~~~a~~~~~~~~-----~~~~d~vvv~GGDGT 92 (337)
T 2qv7_A 24 RKRARIIYNPTSGKEQFKRELPDALIKLEKAG-YETSAY-----ATEKIGDATLEAERAM-----HENYDVLIAAGGDGT 92 (337)
T ss_dssp CEEEEEEECTTSTTSCHHHHHHHHHHHHHHTT-EEEEEE-----ECCSTTHHHHHHHHHT-----TTTCSEEEEEECHHH
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHHHHcC-CeEEEE-----EecCcchHHHHHHHHh-----hcCCCEEEEEcCchH
Confidence 56899999999999888888999999998764 555442 2445678888876543 245789999999999
Q ss_pred HHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEEecCCCCc
Q 011722 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEV 239 (479)
Q Consensus 160 v~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~~~~~~~~~ 239 (479)
|+||+++|.+. ...+|||+||+||+|||||+||+ |.++.++++ .+.+|+.+.+|+|++
T Consensus 93 v~~v~~~l~~~-----~~~~pl~iIP~GT~N~lAr~Lg~----~~~~~~al~----~i~~g~~~~iD~g~v--------- 150 (337)
T 2qv7_A 93 LNEVVNGIAEK-----PNRPKLGVIPMGTVNDFGRALHI----PNDIMGALD----VIIEGHSTKVDIGKM--------- 150 (337)
T ss_dssp HHHHHHHHTTC-----SSCCEEEEEECSSCCHHHHHTTC----CSSHHHHHH----HHHHTCEEEEEEEEE---------
T ss_pred HHHHHHHHHhC-----CCCCcEEEecCCcHhHHHHHcCC----CCCHHHHHH----HHHcCCcEEEEEEEE---------
Confidence 99999999653 36799999999999999999999 556555554 466899999999875
Q ss_pred CCCCCCCCCCccccccccccccCCCCCcccceeceEeeEEeeehhHHHhhHhhhhcccCCCccccCCCcceeeecccccc
Q 011722 240 VDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQ 319 (479)
Q Consensus 240 ~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~rl~nkl~Y~~~~~~~ 319 (479)
++++|+|++++||||+|++.++..+ | +..|+++|...++++
T Consensus 151 -------------------------------~~r~fl~~~~~G~~a~v~~~~~~~~--k------~~~G~~~Y~~~~l~~ 191 (337)
T 2qv7_A 151 -------------------------------NNRYFINLAAGGQLTQVSYETPSKL--K------SIVGPFAYYIKGFEM 191 (337)
T ss_dssp -------------------------------TTEEESSEEEEECBCC---------------------CGGGSCCCTTTT
T ss_pred -------------------------------CCEEEEEEeeecccHHHHHHhhHHH--H------hccChHHHHHHHHHH
Confidence 1479999999999999999887643 1 123889999888776
Q ss_pred cccccccCCCCcccccccceeeeEeeeecCCceEEeeCCcceEEEEeccCCCCcCCCCCCCCCchhhhccCCccccCCCC
Q 011722 320 GWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDG 399 (479)
Q Consensus 320 ~~f~~~~~~~~~~~~l~~~~~~~i~~v~~~~~e~~~~~~~~~~ivv~N~~~~ggG~~~wg~~~p~~~~~~~~~~a~~dDG 399 (479)
++. .+..++++. ++ ++.++ .+...++++|+++++||..++ |+++++||
T Consensus 192 l~~-------------~~~~~~~i~-~d---g~~~~--~~~~~v~v~n~~~~gGg~~i~-------------P~a~~~DG 239 (337)
T 2qv7_A 192 LPQ-------------MKAVDLRIE-YD---GNVFQ--GEALLFFLGLTNSMAGFEKLV-------------PDAKLDDG 239 (337)
T ss_dssp GGG-------------BCCEEEEEE-ET---TEEEE--EEEEEEEEESSCCCSSCSCSS-------------TTCCSSSS
T ss_pred HHh-------------CCCccEEEE-EC---CEEEE--eeEEEEEEECCCCCCCCCccC-------------CCCcCCCC
Confidence 421 123344443 33 34443 457889999999999999874 68999999
Q ss_pred eeEEEEEccchh--HHHHHHhhccce-------EEeeeeEEEEEecCCccccceEEecCCccCCCCCCCCceEEEEEeec
Q 011722 400 LLEIFGLKQGWH--ASFVMVELISAK-------HIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVP 470 (479)
Q Consensus 400 lLeVv~~~~~~~--~~~l~~~l~~g~-------~l~q~~~i~I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~v~i~~~p 470 (479)
+||+++++.... +..++..+..|+ ++.++++++|+.. +++++++|||++.. .+++|+..|
T Consensus 240 ~ldv~~v~~~~~~~l~~~~~~v~~g~~~~~~~v~~~~~~~i~i~~~----~~~~~~iDGE~~~~-------~~i~i~v~p 308 (337)
T 2qv7_A 240 YFTLIIVEKSNLAELGHIMTLASRGEHTKHPKVIYEKAKAINISSF----TDLQLNVDGEYGGK-------LPANFLNLE 308 (337)
T ss_dssp CEEEEEEECCCHHHHHHHHHHHTTTCGGGSTTEEEEEESEEEEECS----SCCEEEETTEEEEE-------SCEEEEEEE
T ss_pred eEEEEEEccCCHHHHHHHHHHHhcCCccCCCCEEEEEeeEEEEEEC----CCCeEEECCCcCCC-------CcEEEEEEc
Confidence 999999998533 323444555443 4568999999865 57899999999863 348999999
Q ss_pred ccccccc
Q 011722 471 FQSLMIS 477 (479)
Q Consensus 471 ~~~~~~~ 477 (479)
....++.
T Consensus 309 ~~l~v~~ 315 (337)
T 2qv7_A 309 RHIDVFA 315 (337)
T ss_dssp EEEEEEC
T ss_pred CeEEEEe
Confidence 8877764
No 3
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=100.00 E-value=7.3e-40 Score=333.13 Aligned_cols=283 Identities=19% Similarity=0.176 Sum_probs=202.0
Q ss_pred CCCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 79 ~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
.+++++||+||.||++ +.++++.+.|.+.. +++... .|.+.+++.++++++. ..+.+.|||+||||
T Consensus 28 ~~~~~~vi~Np~sg~~---~~~~~i~~~l~~~g-~~~~~~-----~t~~~~~~~~~~~~~~-----~~~~d~vvv~GGDG 93 (332)
T 2bon_A 28 EFPASLLILNGKSTDN---LPLREAIMLLREEG-MTIHVR-----VTWEKGDAARYVEEAR-----KFGVATVIAGGGDG 93 (332)
T ss_dssp --CCEEEEECSSSTTC---HHHHHHHHHHHTTT-CCEEEE-----ECCSTTHHHHHHHHHH-----HHTCSEEEEEESHH
T ss_pred hcceEEEEECCCCCCC---chHHHHHHHHHHcC-CcEEEE-----EecCcchHHHHHHHHH-----hcCCCEEEEEccch
Confidence 3678999999999976 46677888887653 444432 2345567777765542 13578999999999
Q ss_pred hHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEEecCCCC
Q 011722 159 TVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGE 238 (479)
Q Consensus 159 Tv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~i~~~~~~~~ 238 (479)
||+||+++|.+.. ....+|||+||+||+|||||+||| |.++.++++ .+.+|+.+++|+|.+
T Consensus 94 Tl~~v~~~l~~~~---~~~~~plgiiP~Gt~N~fa~~l~i----~~~~~~al~----~i~~g~~~~iDlg~v-------- 154 (332)
T 2bon_A 94 TINEVSTALIQCE---GDDIPALGILPLGTANDFATSVGI----PEALDKALK----LAIAGDAIAIDMAQV-------- 154 (332)
T ss_dssp HHHHHHHHHHHCC---SSCCCEEEEEECSSSCHHHHHTTC----CSSHHHHHH----HHHHSEEEEEEEEEE--------
T ss_pred HHHHHHHHHhhcc---cCCCCeEEEecCcCHHHHHHhcCC----CCCHHHHHH----HHHcCCeEEeeEEEE--------
Confidence 9999999998531 126789999999999999999999 556555554 456899999999876
Q ss_pred cCCCCCCCCCCccccccccccccCCCCCcccceec-eEeeEEeeehhHHHhhHhhhhcccCCCccccCCCcceeeecccc
Q 011722 239 VVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEG-VFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSC 317 (479)
Q Consensus 239 ~~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~rl~nkl~Y~~~~~ 317 (479)
+++ +|+|++|+||||+|++.++..+ | .++ |+++|+..++
T Consensus 155 --------------------------------~~r~~fl~~~~~G~da~v~~~~~~~~--k-----~~~-G~~~Y~~~~l 194 (332)
T 2bon_A 155 --------------------------------NKQTCFINMATGGFGTRITTETPEKL--K-----AAL-GSVSYIIHGL 194 (332)
T ss_dssp --------------------------------TTSCEESSEEEEEEEEEC-----------------CC-HHHHHHHHHT
T ss_pred --------------------------------CCceEEEEEEeECccHHHHHHhhHHh--H-----hcc-cHHHHHHHHH
Confidence 125 9999999999999998876432 1 123 8899998876
Q ss_pred cccccccccCCCCcccccccceeeeEeeeecCCceEEeeCCcceEEEEeccCCCCcCCCCCCCCCchhhhccCCccccCC
Q 011722 318 TQGWFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHAD 397 (479)
Q Consensus 318 ~~~~f~~~~~~~~~~~~l~~~~~~~i~~v~~~~~e~~~~~~~~~~ivv~N~~~~ggG~~~wg~~~p~~~~~~~~~~a~~d 397 (479)
+.++. .+..++++. ++ ++.++ .+...++++|++|||||..+| |+++++
T Consensus 195 ~~l~~-------------~~~~~~~i~-~d---g~~~~--~~~~~v~v~N~~~~ggg~~i~-------------P~a~~~ 242 (332)
T 2bon_A 195 MRMDT-------------LQPDRCEIR-GE---NFHWQ--GDALVIGIGNGRQAGGGQQLC-------------PNALIN 242 (332)
T ss_dssp SCEEE-------------EECEEEEEE-ET---TEEEE--EEESEEEEESSSCBTTTBCSC-------------TTCCTT
T ss_pred HHHhh-------------CCCeeEEEE-EC---CEEEE--EEEEEEEEECCCccCCCcccC-------------CCCCCC
Confidence 55321 122344443 32 34443 457888999999999999874 689999
Q ss_pred CCeeEEEEEccchhHHHHHHhhccc-----eEEeeeeEEEEEecCCccccceEEecCCccCCCCCCCCceEEEEEeeccc
Q 011722 398 DGLLEIFGLKQGWHASFVMVELISA-----KHIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQ 472 (479)
Q Consensus 398 DGlLeVv~~~~~~~~~~l~~~l~~g-----~~l~q~~~i~I~~~~~~~~~~~~qiDGE~~~~~~~~~~~~~v~i~~~p~~ 472 (479)
||+|||++++...++..++..+..| .++.++++++|+.. +++++|+|||++.. ++++|+..|..
T Consensus 243 DG~Ldv~iv~~~~~~l~~~~~~~~g~~~~~v~~~~~~~i~I~~~----~~~~~~iDGE~~~~-------~~~~i~v~p~a 311 (332)
T 2bon_A 243 DGLLQLRIFTGDEILPALVSTLKSDEDNPNIIEGASSWFDIQAP----HDITFNLDGEPLSG-------QNFHIEILPAA 311 (332)
T ss_dssp SSCEEEEEECCSSCCHHHHHHHHTTCCCTTEEEEEESEEEEEEE----EEEEEEETTEEEEE-------EEEEEEEEEEE
T ss_pred CCeEEEEEECCHHHHHHHHHHHHcCCCCCcEEEEEeeEEEEEEC----CCCeEEecCCCCCC-------ceEEEEEECCe
Confidence 9999999998863333344444443 45568999999875 67899999999863 56999999988
Q ss_pred ccccc
Q 011722 473 SLMIS 477 (479)
Q Consensus 473 ~~~~~ 477 (479)
..++.
T Consensus 312 l~vl~ 316 (332)
T 2bon_A 312 LRCRL 316 (332)
T ss_dssp EEEEE
T ss_pred eEEEe
Confidence 77664
No 4
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=99.42 E-value=2e-12 Score=128.52 Aligned_cols=114 Identities=15% Similarity=0.076 Sum_probs=66.1
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhc-ch--hhhhccCCccEEEEEcC
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAEL-GD--FCAKDTRQKMRIVVAGG 156 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~-~~--~~a~~~~~~~~Vvv~GG 156 (479)
++++++|+||.++. ..+.++++.+.|.+. .+++...... +..+... .. .......+.|.||++||
T Consensus 5 mkki~ii~np~~~~--~~~~~~~i~~~l~~~-g~~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~D~vi~~GG 72 (292)
T 2an1_A 5 FKCIGIVGHPRHPT--ALTTHEMLYRWLCDQ-GYEVIVEQQI---------AHELQLKNVPTGTLAEIGQQADLAVVVGG 72 (292)
T ss_dssp CCEEEEECC---------CHHHHHHHHHHHT-TCEEEEEHHH---------HHHTTCSSCCEECHHHHHHHCSEEEECSC
T ss_pred CcEEEEEEcCCCHH--HHHHHHHHHHHHHHC-CCEEEEecch---------hhhcccccccccchhhcccCCCEEEEEcC
Confidence 67899999998753 346778888888765 3555432110 0111000 00 00000124689999999
Q ss_pred chhHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCc
Q 011722 157 DGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPI 222 (479)
Q Consensus 157 DGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~ 222 (479)
|||++++++.+.+. ..|.||| |+||.|+|++ ++ |.++.++++. +.+|+.
T Consensus 73 DGT~l~a~~~~~~~------~~P~lGI-~~Gt~gfla~-~~-----~~~~~~al~~----i~~g~~ 121 (292)
T 2an1_A 73 DGNMLGAARTLARY------DINVIGI-NRGNLGFLTD-LD-----PDNALQQLSD----VLEGRY 121 (292)
T ss_dssp HHHHHHHHHHHTTS------SCEEEEB-CSSSCCSSCC-BC-----TTSHHHHHHH----HHTTCE
T ss_pred cHHHHHHHHHhhcC------CCCEEEE-ECCCcccCCc-CC-----HHHHHHHHHH----HHcCCC
Confidence 99999999999762 2345777 8999888886 33 4455555554 456654
No 5
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=99.23 E-value=1.8e-10 Score=115.39 Aligned_cols=117 Identities=15% Similarity=0.206 Sum_probs=68.4
Q ss_pred CCCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechh-------------h-HHHHHHhcchhhhhc
Q 011722 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGL-------------A-CLEKLAELGDFCAKD 144 (479)
Q Consensus 79 ~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~-------------~-~~~~la~~~~~~a~~ 144 (479)
+++++++|+||.++. ..+..+++.+.|.++. +++....+.. ... + ++..+++.. ..
T Consensus 3 ~m~ki~iI~n~~~~~--~~~~~~~l~~~L~~~g-~~v~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~ 72 (307)
T 1u0t_A 3 AHRSVLLVVHTGRDE--ATETARRVEKVLGDNK-IALRVLSAEA---VDRGSLHLAPDDMRAMGVEIEVVDADQ----HA 72 (307)
T ss_dssp --CEEEEEESSSGGG--GSHHHHHHHHHHHTTT-CEEEEEC---------------------------------------
T ss_pred CCCEEEEEEeCCCHH--HHHHHHHHHHHHHHCC-CEEEEecchh---hhhhccccccccccccccccccccccc----cc
Confidence 367899999999863 3467888888887654 5544322211 000 0 111111100 01
Q ss_pred cCCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCc
Q 011722 145 TRQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPI 222 (479)
Q Consensus 145 ~~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~ 222 (479)
..+.|.||++|||||+.++++.+... ..|.+|| ++||.|.|+. +. |.++.++++. +.+|+.
T Consensus 73 ~~~~d~vi~~GGDGT~l~a~~~~~~~------~~pvlgi-~~G~~gfl~~-~~-----~~~~~~~~~~----i~~g~~ 133 (307)
T 1u0t_A 73 ADGCELVLVLGGDGTFLRAAELARNA------SIPVLGV-NLGRIGFLAE-AE-----AEAIDAVLEH----VVAQDY 133 (307)
T ss_dssp ---CCCEEEEECHHHHHHHHHHHHHH------TCCEEEE-ECSSCCSSCS-EE-----GGGHHHHHHH----HHHTCC
T ss_pred ccCCCEEEEEeCCHHHHHHHHHhccC------CCCEEEE-eCCCCccCcc-cC-----HHHHHHHHHH----HHcCCc
Confidence 24568999999999999999999763 2345775 8999999885 42 4455555554 445554
No 6
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=99.21 E-value=4.6e-11 Score=116.78 Aligned_cols=97 Identities=21% Similarity=0.206 Sum_probs=65.1
Q ss_pred cEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhHH
Q 011722 82 PMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVG 161 (479)
Q Consensus 82 ~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv~ 161 (479)
++++|+||.||++ ..++.+++.+.|. .+++.. . + +. ...+.|.||++|||||++
T Consensus 2 ki~ii~Np~~~~~-~~~~~~~i~~~l~---~~~~~~---------~--~------~~-----~~~~~D~vv~~GGDGTll 55 (258)
T 1yt5_A 2 KIAILYREEREKE-GEFLKEKISKEHE---VIEFGE---------A--N------AP-----GRVTADLIVVVGGDGTVL 55 (258)
T ss_dssp EEEEEECGGGHHH-HHHHHHHHTTTSE---EEEEEE---------S--S------SC-----SCBCCSEEEEEECHHHHH
T ss_pred EEEEEEeCCCchH-HHHHHHHHHHHhc---CCceec---------c--c------cc-----ccCCCCEEEEEeCcHHHH
Confidence 5889999999976 6677777777665 244321 1 1 11 124578999999999999
Q ss_pred HHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCc
Q 011722 162 WVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPI 222 (479)
Q Consensus 162 ~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~ 222 (479)
++++.+.. ..|.+|| ++||.+.|+ .+. |.++.++++. +.+|+.
T Consensus 56 ~~a~~~~~-------~~PilGI-n~G~~Gfl~-~~~-----~~~~~~al~~----i~~g~~ 98 (258)
T 1yt5_A 56 KAAKKAAD-------GTPMVGF-KAGRLGFLT-SYT-----LDEIDRFLED----LRNWNF 98 (258)
T ss_dssp HHHTTBCT-------TCEEEEE-ESSSCCSSC-CBC-----GGGHHHHHHH----HHTTCC
T ss_pred HHHHHhCC-------CCCEEEE-ECCCCCccC-cCC-----HHHHHHHHHH----HHcCCc
Confidence 99998753 1344777 599996666 453 4555555554 556654
No 7
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=99.19 E-value=1.5e-10 Score=114.09 Aligned_cols=94 Identities=15% Similarity=0.152 Sum_probs=64.1
Q ss_pred cEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhHH
Q 011722 82 PMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVG 161 (479)
Q Consensus 82 ~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv~ 161 (479)
++.+|+||+ .+..+..+++.+.|.+.. +++. ..+.|.||++|||||+.
T Consensus 2 ki~ii~n~~---~~~~~~~~~l~~~l~~~g-~~v~----------------------------~~~~D~vv~lGGDGT~l 49 (272)
T 2i2c_A 2 KYMITSKGD---EKSDLLRLNMIAGFGEYD-MEYD----------------------------DVEPEIVISIGGDGTFL 49 (272)
T ss_dssp EEEEEECCS---HHHHHHHHHHHHHHTTSS-CEEC----------------------------SSSCSEEEEEESHHHHH
T ss_pred EEEEEECCC---HHHHHHHHHHHHHHHHCC-CEeC----------------------------CCCCCEEEEEcCcHHHH
Confidence 688999973 244567788888887642 3321 13468999999999999
Q ss_pred HHHHHHhhccccCCCCCCc-EEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcCCce
Q 011722 162 WVLGSVGELNKQGREPVPP-VAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPIC 223 (479)
Q Consensus 162 ~Vl~~l~~~~~~~~~~~~p-lgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g~~~ 223 (479)
.+++.+... ..++| +|| |+|| |.|.+.+. |.++.++++ .+.+|..+
T Consensus 50 ~aa~~~~~~-----~~~~PilGI-n~G~-lgfl~~~~-----~~~~~~~l~----~l~~g~~~ 96 (272)
T 2i2c_A 50 SAFHQYEER-----LDEIAFIGI-HTGH-LGFYADWR-----PAEADKLVK----LLAKGEYQ 96 (272)
T ss_dssp HHHHHTGGG-----TTTCEEEEE-ESSS-CCSSCCBC-----GGGHHHHHH----HHHTTCCE
T ss_pred HHHHHHhhc-----CCCCCEEEE-eCCC-CCcCCcCC-----HHHHHHHHH----HHHcCCCE
Confidence 999998652 12456 676 9999 66877774 345444544 45566553
No 8
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=97.37 E-value=0.00051 Score=70.56 Aligned_cols=125 Identities=18% Similarity=0.131 Sum_probs=72.0
Q ss_pred CCCcEEEEEcCCCCCCChhHHHHHHHHhhhhcC-eeEEEeecCccceechhhHHHHHHhcc----------h------hh
Q 011722 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQ-VFDLSEVKPHEFVQYGLACLEKLAELG----------D------FC 141 (479)
Q Consensus 79 ~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~q-v~dl~~~~p~~~~t~~~~~~~~la~~~----------~------~~ 141 (479)
++++++||.||.. ....+...++.+.|..+. .+++.+.. ..+..+.... . ..
T Consensus 40 ~~k~V~II~n~~~--~~~~~~~~~l~~~L~~~~~gi~V~ve~---------~~a~~l~~~~~~~~~~~~~~~~~~~~~~~ 108 (388)
T 3afo_A 40 PLQNVYITKKPWT--PSTREAMVEFITHLHESYPEVNVIVQP---------DVAEEISQDFKSPLENDPNRPHILYTGPE 108 (388)
T ss_dssp CCCEEEEEECTTC--HHHHHHHHHHHHHHHHHCTTCEEECCH---------HHHHHHHTTCCSCGGGCTTSCEEEEECCH
T ss_pred CCcEEEEEEeCCC--HHHHHHHHHHHHHHHHhCCCeEEEEeC---------chhhhhhhhccccccccccccccccccch
Confidence 4789999999874 344567777777776541 24443311 1112221110 0 00
Q ss_pred hhccCCccEEEEEcCchhHHHHHHHHhhccccCCCCC-CcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHHcC
Q 011722 142 AKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGREPV-PPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAG 220 (479)
Q Consensus 142 a~~~~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~-~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~~g 220 (479)
.......|.||+.|||||+..++..+... .. |.||| ++||.+-|+. +.. .++ +.+++.+.+|
T Consensus 109 ~~~~~~~DlVIvlGGDGTlL~aa~~~~~~------~vpPiLGI-N~G~lGFLt~-~~~-----~~~----~~al~~il~g 171 (388)
T 3afo_A 109 QDIVNRTDLLVTLGGDGTILHGVSMFGNT------QVPPVLAF-ALGTLGFLSP-FDF-----KEH----KKVFQEVISS 171 (388)
T ss_dssp HHHHHHCSEEEEEESHHHHHHHHHTTTTS------CCCCEEEE-ECSSCCSSCC-EEG-----GGH----HHHHHHHHTT
T ss_pred hhcccCCCEEEEEeCcHHHHHHHHHhccc------CCCeEEEE-ECCCcccCCc-CCh-----HHH----HHHHHHHhcC
Confidence 00012468999999999999999887642 22 34665 9999865553 432 233 4445556788
Q ss_pred CceeeeeeEEE
Q 011722 221 PICRLDSWHAV 231 (479)
Q Consensus 221 ~~~~iD~~~i~ 231 (479)
.......-.++
T Consensus 172 ~~~~~~r~~L~ 182 (388)
T 3afo_A 172 RAKCLHRTRLE 182 (388)
T ss_dssp CCEEEEECCEE
T ss_pred CceEEEeeEEE
Confidence 77555544443
No 9
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=95.70 E-value=0.039 Score=53.92 Aligned_cols=92 Identities=21% Similarity=0.291 Sum_probs=57.8
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhH
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv 160 (479)
.++.++.|+..- .+++.+.|..+ .+++....... . ...+.|.||+.|||||+
T Consensus 30 mki~iv~~~~~~-------~~~l~~~L~~~-g~~v~~~~~~~---------~-----------~~~~~DlvIvlGGDGT~ 81 (278)
T 1z0s_A 30 MRAAVVYKTDGH-------VKRIEEALKRL-EVEVELFNQPS---------E-----------ELENFDFIVSVGGDGTI 81 (278)
T ss_dssp CEEEEEESSSTT-------HHHHHHHHHHT-TCEEEEESSCC---------G-----------GGGGSSEEEEEECHHHH
T ss_pred eEEEEEeCCcHH-------HHHHHHHHHHC-CCEEEEccccc---------c-----------ccCCCCEEEEECCCHHH
Confidence 358899997654 55666777654 35544321100 0 02356899999999999
Q ss_pred HHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHH
Q 011722 161 GWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTL 214 (479)
Q Consensus 161 ~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l 214 (479)
-.++..+.. . +|+-=|.+||-+=|+. +. +.+..+++++++
T Consensus 82 L~aa~~~~~-------~-~PilGIN~G~lGFLt~-~~-----~~~~~~~l~~l~ 121 (278)
T 1z0s_A 82 LRILQKLKR-------C-PPIFGINTGRVGLLTH-AS-----PENFEVELKKAV 121 (278)
T ss_dssp HHHHTTCSS-------C-CCEEEEECSSSCTTCC-BB-----TTBCHHHHHHHH
T ss_pred HHHHHHhCC-------C-CcEEEECCCCCccccc-cC-----HHHHHHHHHHHH
Confidence 888865543 3 6777778887665553 21 345666776655
No 10
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=94.90 E-value=0.27 Score=49.84 Aligned_cols=126 Identities=19% Similarity=0.164 Sum_probs=67.2
Q ss_pred CCCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHh---------cc----hhhhhcc
Q 011722 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAE---------LG----DFCAKDT 145 (479)
Q Consensus 79 ~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~---------~~----~~~a~~~ 145 (479)
+.+.++||--|..- ...+...+|.+.|..+. +.+.+.... ..+. .+.. .. .......
T Consensus 37 ~~k~I~iv~K~~~~--~~~~~~~~l~~~L~~~~-~~V~ve~~~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (365)
T 3pfn_A 37 SPKSVLVIKKMRDA--SLLQPFKELCTHLMEEN-MIVYVEKKV------LEDP-AIASDESFGAVKKKFCTFREDYDDIS 106 (365)
T ss_dssp CCCEEEEEECTTCG--GGHHHHHHHHHHHHHTS-CEEEEEHHH------HHSH-HHHHCSTTHHHHHHCEEECTTTCCCT
T ss_pred CCCEEEEEecCCCH--HHHHHHHHHHHHHHHCC-CEEEEehHH------hhhh-ccccccccccccccccccccChhhcc
Confidence 57788888877654 33456677777776553 555432110 0000 0100 00 0000112
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCC-CcHHHHHHHHHHHHHcCCcee
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFP-FAWKSAVKRTLQRASAGPICR 224 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p-~~~~~al~~~l~~i~~g~~~~ 224 (479)
...|.||+.|||||+=.++..+.. ..+|+-=|-+| +||+=..++ .+ ++..++++.+|....
T Consensus 107 ~~~DlvI~lGGDGT~L~aa~~~~~-------~~~PvlGiN~G-------~LGFLt~~~~~~----~~~~l~~vl~g~~~v 168 (365)
T 3pfn_A 107 NQIDFIICLGGDGTLLYASSLFQG-------SVPPVMAFHLG-------SLGFLTPFSFEN----FQSQVTQVIEGNAAV 168 (365)
T ss_dssp TTCSEEEEESSTTHHHHHHHHCSS-------SCCCEEEEESS-------SCTTTCCEESTT----HHHHHHHHHHSCCBE
T ss_pred cCCCEEEEEcChHHHHHHHHHhcc-------CCCCEEEEcCC-------CCccceeecHHH----HHHHHHHHHcCCCeE
Confidence 356899999999999999987654 45665445555 344322222 23 344455566777655
Q ss_pred eeeeEEEE
Q 011722 225 LDSWHAVI 232 (479)
Q Consensus 225 iD~~~i~~ 232 (479)
-.+..+++
T Consensus 169 ~~R~~L~~ 176 (365)
T 3pfn_A 169 VLRSRLKV 176 (365)
T ss_dssp EEECCEEE
T ss_pred EEEeeEEE
Confidence 44444443
No 11
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=76.99 E-value=5.3 Score=40.06 Aligned_cols=85 Identities=15% Similarity=0.194 Sum_probs=52.2
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEE-EeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDL-SEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl-~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
.++++|+..+.. ..+.+++.+.|.... +.+ ....|.. .....++.++.+ + ..+.|.||++|| |
T Consensus 36 ~~r~liVtd~~~-----~~~~~~v~~~L~~~~-~~~f~~v~~~p----~~~~v~~~~~~~----~-~~~~D~IIavGG-G 99 (358)
T 3jzd_A 36 AKRALVLCTPNQ-----QAEAERIADLLGPLS-AGVYAGAVMHV----PIESARDATARA----R-EAGADCAVAVGG-G 99 (358)
T ss_dssp CSCEEEECCGGG-----HHHHHHHHHHHGGGE-EEEECCCCTTC----BHHHHHHHHHHH----H-HHTCSEEEEEES-H
T ss_pred CCeEEEEeCCcH-----HHHHHHHHHHhccCC-EEEecCCcCCC----CHHHHHHHHHHh----h-ccCCCEEEEeCC-c
Confidence 367888877643 235677888887643 222 2222222 123334444332 2 135689999999 9
Q ss_pred hHHHHHHHHhhccccCCCCCCcEEeecC
Q 011722 159 TVGWVLGSVGELNKQGREPVPPVAIIPL 186 (479)
Q Consensus 159 Tv~~Vl~~l~~~~~~~~~~~~plgiIPl 186 (479)
++..++..+... ..+|+..||.
T Consensus 100 sviD~aK~iA~~------~~~p~i~IPT 121 (358)
T 3jzd_A 100 STTGLGKAIALE------TGMPIVAIPT 121 (358)
T ss_dssp HHHHHHHHHHHH------HCCCEEEEEC
T ss_pred HHHHHHHHHHhc------cCCCEEEEeC
Confidence 999999887653 4678888886
No 12
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=76.87 E-value=6 Score=39.52 Aligned_cols=85 Identities=15% Similarity=0.141 Sum_probs=52.7
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEE-eecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLS-EVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~-~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
.++++|+..+.. ..+.+++.+.|.... +.+. ...|.. .....+++++.+ + ..+.|.||++|| |
T Consensus 34 ~~r~liVtd~~~-----~~~~~~v~~~L~~~~-~~v~~~v~~~p----~~~~v~~~~~~~----~-~~~~D~IIavGG-G 97 (353)
T 3hl0_A 34 LSRALVLSTPQQ-----KGDAEALASRLGRLA-AGVFSEAAMHT----PVEVTKTAVEAY----R-AAGADCVVSLGG-G 97 (353)
T ss_dssp CCCEEEECCGGG-----HHHHHHHHHHHGGGE-EEEECCCCTTC----BHHHHHHHHHHH----H-HTTCSEEEEEES-H
T ss_pred CCEEEEEecCch-----hhHHHHHHHHHhhCC-cEEecCcCCCC----cHHHHHHHHHHH----h-ccCCCEEEEeCC-c
Confidence 367888877642 236777888887642 3221 222222 123344444332 2 245689999999 9
Q ss_pred hHHHHHHHHhhccccCCCCCCcEEeecC
Q 011722 159 TVGWVLGSVGELNKQGREPVPPVAIIPL 186 (479)
Q Consensus 159 Tv~~Vl~~l~~~~~~~~~~~~plgiIPl 186 (479)
++..++..+... ..+|+..||.
T Consensus 98 s~iD~aK~iA~~------~~~p~i~IPT 119 (353)
T 3hl0_A 98 STTGLGKAIALR------TDAAQIVIPT 119 (353)
T ss_dssp HHHHHHHHHHHH------HCCEEEEEEC
T ss_pred HHHHHHHHHHhc------cCCCEEEEeC
Confidence 999999887653 4678888886
No 13
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=68.00 E-value=9.9 Score=38.59 Aligned_cols=102 Identities=13% Similarity=0.211 Sum_probs=55.8
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhH
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv 160 (479)
++++|+..+.+-.. ..+.+++.+.|.......+....|.+ .....+++++.+. ..+.|.||++|| |++
T Consensus 51 ~r~liVtd~~~~~~--~g~~~~v~~~L~g~~~~~f~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-Gsv 118 (408)
T 1oj7_A 51 ARVLITYGGGSVKK--TGVLDQVLDALKGMDVLEFGGIEPNP----AYETLMNAVKLVR-----EQKVTFLLAVGG-GSV 118 (408)
T ss_dssp CEEEEEECSSHHHH--HSHHHHHHHHTTTSEEEEECCCCSSC----BHHHHHHHHHHHH-----HHTCCEEEEEES-HHH
T ss_pred CEEEEEECCchhhh--ccHHHHHHHHhCCCEEEEeCCcCCCc----CHHHHHHHHHHHH-----HcCCCEEEEeCC-chH
Confidence 68888886553211 11567777777521111122222222 1233444443322 134589999999 899
Q ss_pred HHHHHHHhhccc---------------cCCCCCCcEEeecC--CCcccccc
Q 011722 161 GWVLGSVGELNK---------------QGREPVPPVAIIPL--GTGNDLSR 194 (479)
Q Consensus 161 ~~Vl~~l~~~~~---------------~~~~~~~plgiIPl--GTgNDfAr 194 (479)
..++..+...-. ......+|+..||. |||-....
T Consensus 119 iD~AK~iA~~~~~~~~~~~~d~~~~~~~~~~~~~p~i~IPTTagtgSevt~ 169 (408)
T 1oj7_A 119 LDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNA 169 (408)
T ss_dssp HHHHHHHHHHTTSCTTSCTTHHHHTTTTTCCCCCCEEEEESSCSSCGGGSS
T ss_pred HHHHHHHHHHHhCCCCCCHHHHhccccCcCCCCCCEEEEeCCCchhHHhCC
Confidence 888877754311 00115579999997 66555443
No 14
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=66.74 E-value=6.5 Score=39.49 Aligned_cols=84 Identities=18% Similarity=0.254 Sum_probs=51.2
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchh
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGT 159 (479)
.++++|+..+.. ..+.+++.+.|....+|+ ...|.. .....++.++.+ + ..+.|.||++|| |+
T Consensus 37 ~~rvliVtd~~~-----~~~~~~v~~~L~~~~~f~--~v~~~p----~~~~v~~~~~~~----~-~~~~D~IIavGG-Gs 99 (364)
T 3iv7_A 37 SAKVMVIAGERE-----MSIAHKVASEIEVAIWHD--EVVMHV----PIEVAERARAVA----T-DNEIDLLVCVGG-GS 99 (364)
T ss_dssp CSSEEEECCGGG-----HHHHHHHTTTSCCSEEEC--CCCTTC----BHHHHHHHHHHH----H-HTTCCEEEEEES-HH
T ss_pred CCEEEEEECCCH-----HHHHHHHHHHcCCCEEEc--ceecCC----CHHHHHHHHHHH----H-hcCCCEEEEeCC-cH
Confidence 357888877642 235577777776322233 222322 123344444332 2 245789999999 99
Q ss_pred HHHHHHHHhhccccCCCCCCcEEeecC
Q 011722 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (479)
Q Consensus 160 v~~Vl~~l~~~~~~~~~~~~plgiIPl 186 (479)
+..++..+... ..+|+..||.
T Consensus 100 ~iD~aK~iA~~------~~~P~i~IPT 120 (364)
T 3iv7_A 100 TIGLAKAIAMT------TALPIVAIPT 120 (364)
T ss_dssp HHHHHHHHHHH------HCCCEEEEEC
T ss_pred HHHHHHHHHhc------cCCCEEEEcC
Confidence 99999887653 4678888886
No 15
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=66.69 E-value=36 Score=33.90 Aligned_cols=101 Identities=23% Similarity=0.292 Sum_probs=57.3
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-e-EEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~-dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
++++|+..+.+-...+ +.+++.+.|..... + .+....|.. .....+++++.+. ..+.|.||++|| |
T Consensus 41 ~~~liVtd~~~~~~~g--~~~~v~~~L~~~g~~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIavGG-G 108 (371)
T 1o2d_A 41 KRALVVTGKSSSKKNG--SLDDLKKLLDETEISYEIFDEVEENP----SFDNVMKAVERYR-----NDSFDFVVGLGG-G 108 (371)
T ss_dssp SEEEEEEESSGGGTSS--HHHHHHHHHHHTTCEEEEEEEECSSC----BHHHHHHHHHHHT-----TSCCSEEEEEES-H
T ss_pred CEEEEEECchHHhhcc--HHHHHHHHHHHcCCeEEEeCCccCCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC-h
Confidence 6899999875543322 55666666654321 1 122223322 2234455544332 235789999998 8
Q ss_pred hHHHHHHHHhhcccc------------CCCCCCcEEeecC--CCccccc
Q 011722 159 TVGWVLGSVGELNKQ------------GREPVPPVAIIPL--GTGNDLS 193 (479)
Q Consensus 159 Tv~~Vl~~l~~~~~~------------~~~~~~plgiIPl--GTgNDfA 193 (479)
++..++..+...-.. .....+|+..||. |||-...
T Consensus 109 sv~D~AK~iA~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTTagtgse~t 157 (371)
T 1o2d_A 109 SPMDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPTTAGTGSEVT 157 (371)
T ss_dssp HHHHHHHHHHHHTTSTTCCSGGGGCGGGCCCCCCEEEEECSSCCCGGGC
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHhcccCCCCCCeEEEEeCCCchhhhhc
Confidence 888888776543110 0014679999996 5655443
No 16
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=65.09 E-value=11 Score=38.01 Aligned_cols=85 Identities=16% Similarity=0.162 Sum_probs=49.4
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchh
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGT 159 (479)
++++||..+..-. ...+++.+.|.. .+ +.+....+.. .....+++++.+. ..+.|.||++|| |+
T Consensus 53 ~r~liVtd~~~~~----~~~~~v~~~L~~-g~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIavGG-Gs 117 (387)
T 3uhj_A 53 KRALVLIDRVLFD----ALSERIGKSCGD-SLDIRFERFGGEC----CTSEIERVRKVAI-----EHGSDILVGVGG-GK 117 (387)
T ss_dssp SEEEEEECTTTHH----HHHHHC-------CCEEEEEECCSSC----SHHHHHHHHHHHH-----HHTCSEEEEESS-HH
T ss_pred CEEEEEECchHHH----HHHHHHHHHHHc-CCCeEEEEcCCCC----CHHHHHHHHHHHh-----hcCCCEEEEeCC-cH
Confidence 7899998876542 366777777765 31 2122222322 1133444443322 135689999999 99
Q ss_pred HHHHHHHHhhccccCCCCCCcEEeecC
Q 011722 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (479)
Q Consensus 160 v~~Vl~~l~~~~~~~~~~~~plgiIPl 186 (479)
+..++..+.-. ..+|+..||.
T Consensus 118 ~~D~AK~iA~~------~~~p~i~IPT 138 (387)
T 3uhj_A 118 TADTAKIVAID------TGARIVIAPT 138 (387)
T ss_dssp HHHHHHHHHHH------TTCEEEECCS
T ss_pred HHHHHHHHHHh------cCCCEEEecC
Confidence 99999888753 4689999998
No 17
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=64.96 E-value=8.5 Score=38.56 Aligned_cols=95 Identities=18% Similarity=0.176 Sum_probs=54.1
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchh
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGT 159 (479)
.++++|+.++.... ...+++.+.|...-.+........+ ........+++.+.+.+ ......+.||+.|| |+
T Consensus 34 ~~k~liVtd~~v~~----~~~~~v~~~L~~~~~~~~~~~~~ge-~~k~~~~v~~~~~~~~~--~~~~r~d~iIalGG-Gs 105 (368)
T 2gru_A 34 FDQYIMISDSGVPD----SIVHYAAEYFGKLAPVHILRFQGGE-EYKTLSTVTNLQERAIA--LGANRRTAIVAVGG-GL 105 (368)
T ss_dssp CSEEEEEEETTSCH----HHHHHHHHHHTTTSCEEEEEECCSG-GGCSHHHHHHHHHHHHH--TTCCTTEEEEEEES-HH
T ss_pred CCEEEEEECCcHHH----HHHHHHHHHHHhccceeEEEeCCCC-CCCCHHHHHHHHHHHHh--cCCCCCcEEEEECC-hH
Confidence 47899999976652 2567777777643012211111111 11122334444333221 01233688999998 99
Q ss_pred HHHHHHHHhhccccCCCCCCcEEeecC
Q 011722 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (479)
Q Consensus 160 v~~Vl~~l~~~~~~~~~~~~plgiIPl 186 (479)
+..++..+.... ...+|+..||.
T Consensus 106 v~D~ak~~Aa~~----~rgip~i~IPT 128 (368)
T 2gru_A 106 TGNVAGVAAGMM----FRGIALIHVPT 128 (368)
T ss_dssp HHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred HHHHHHHHHHHh----cCCCCEEEECC
Confidence 999998876431 25689999998
No 18
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=62.03 E-value=7.7 Score=39.26 Aligned_cols=102 Identities=17% Similarity=0.159 Sum_probs=58.3
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcC-----eeEE--EeecCccceechhhHHHHHHhcchhhhhc--cCCccE
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQ-----VFDL--SEVKPHEFVQYGLACLEKLAELGDFCAKD--TRQKMR 150 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~q-----v~dl--~~~~p~~~~t~~~~~~~~la~~~~~~a~~--~~~~~~ 150 (479)
.++++|+.++... ....+++.+.|.... .+.+ ....+.+ ........+++.+.+.+ .. ....+.
T Consensus 36 ~~k~liVtd~~v~----~~~~~~v~~~L~~~~~~~~~g~~~~~~~~~~gE-~~k~~~~v~~~~~~~~~--~~~~~~r~d~ 108 (393)
T 1sg6_A 36 STTYVLVTDTNIG----SIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGE-VSKSRQTKADIEDWMLS--QNPPCGRDTV 108 (393)
T ss_dssp CSEEEEEEEHHHH----HHHHHHHHHHHHHHHHHSSSCCEEEEEEECSSG-GGSSHHHHHHHHHHHHT--SSSCCCTTCE
T ss_pred CCeEEEEECCcHH----HHHHHHHHHHHHhhhccccCCceeEEEEeCCCC-CCCCHHHHHHHHHHHHH--cCCCCCCCCE
Confidence 4689999886433 225566666665430 1232 2222211 01122344444443321 01 123388
Q ss_pred EEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecC--CCccccc
Q 011722 151 IVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDLS 193 (479)
Q Consensus 151 Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPl--GTgNDfA 193 (479)
||++|| |++..++..+.... ...+|+..||. ||+.|-+
T Consensus 109 iIalGG-Gsv~D~ak~~Aa~~----~rgip~i~IPTTlla~~das 148 (393)
T 1sg6_A 109 VIALGG-GVIGDLTGFVASTY----MRGVRYVQVPTTLLAMVDSS 148 (393)
T ss_dssp EEEEES-HHHHHHHHHHHHHG----GGCCEEEEEECSHHHHHTTT
T ss_pred EEEECC-cHHHHHHHHHHHHh----cCCCCEEEECCchhhhhhcC
Confidence 999998 99999988876421 14689999999 8998884
No 19
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=57.90 E-value=74 Score=28.39 Aligned_cols=76 Identities=18% Similarity=0.167 Sum_probs=49.6
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccCC-ccEEEEEcCch
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGDG 158 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~-~~~Vvv~GGDG 158 (479)
.++.||.=..|- -...++....|....+ ||+.+...+ +.+..+.++++++. .++ .-.|.++||.|
T Consensus 13 P~V~IimGS~SD----~~v~~~a~~~l~~~gi~~ev~V~saH----R~p~~l~~~~~~a~-----~~g~~ViIa~AG~aa 79 (173)
T 4grd_A 13 PLVGVLMGSSSD----WDVMKHAVAILQEFGVPYEAKVVSAH----RMPDEMFDYAEKAR-----ERGLRAIIAGAGGAA 79 (173)
T ss_dssp CSEEEEESSGGG----HHHHHHHHHHHHHTTCCEEEEECCTT----TSHHHHHHHHHHHT-----TTTCSEEEEEEESSC
T ss_pred CeEEEEeCcHhH----HHHHHHHHHHHHHcCCCEEEEEEccc----cCHHHHHHHHHHHH-----hcCCeEEEEeccccc
Confidence 346666643333 3466666667766554 888876543 35566777776653 223 34678899999
Q ss_pred hHHHHHHHHhh
Q 011722 159 TVGWVLGSVGE 169 (479)
Q Consensus 159 Tv~~Vl~~l~~ 169 (479)
-+--|+.++..
T Consensus 80 hLpgvvA~~t~ 90 (173)
T 4grd_A 80 HLPGMLAAKTT 90 (173)
T ss_dssp CHHHHHHHHCC
T ss_pred cchhhheecCC
Confidence 99999998853
No 20
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=57.03 E-value=46 Score=29.69 Aligned_cols=78 Identities=17% Similarity=0.151 Sum_probs=48.8
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
++|.+.|+= |+...-...++....|....+ ||+.+...+ +.+..+.++++++.+ ..-.-.|.++||.+
T Consensus 10 ~~~~V~Iim---GS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaH----R~p~~l~~~~~~a~~----~g~~ViIa~AG~aa 78 (170)
T 1xmp_A 10 MKSLVGVIM---GSTSDWETMKYACDILDELNIPYEKKVVSAH----RTPDYMFEYAETARE----RGLKVIIAGAGGAA 78 (170)
T ss_dssp -CCSEEEEE---SSGGGHHHHHHHHHHHHHTTCCEEEEECCTT----TSHHHHHHHHHHTTT----TTCCEEEEEEESSC
T ss_pred CCCcEEEEE---CcHHHHHHHHHHHHHHHHcCCCEEEEEEecc----CCHHHHHHHHHHHHh----CCCcEEEEECCchh
Confidence 455554442 433334566777777766554 888875433 356677778766531 11234688899999
Q ss_pred hHHHHHHHHh
Q 011722 159 TVGWVLGSVG 168 (479)
Q Consensus 159 Tv~~Vl~~l~ 168 (479)
-+--++.++.
T Consensus 79 ~LpgvvA~~t 88 (170)
T 1xmp_A 79 HLPGMVAAKT 88 (170)
T ss_dssp CHHHHHHTTC
T ss_pred hhHHHHHhcc
Confidence 9999998774
No 21
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=56.43 E-value=22 Score=36.08 Aligned_cols=95 Identities=15% Similarity=0.190 Sum_probs=55.1
Q ss_pred CCCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEE--eecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcC
Q 011722 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLS--EVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG 156 (479)
Q Consensus 79 ~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~--~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GG 156 (479)
..++++|+.++... ....+++.+.|.... +++. .....+ ........+++.+.+.+. .....+.||+.||
T Consensus 61 ~~~rvlIVtd~~v~----~~~~~~v~~~L~~~g-~~~~~~~~~~gE-~~kt~~~v~~~~~~l~~~--~~~R~d~IIAvGG 132 (390)
T 3okf_A 61 AKQKVVIVTNHTVA----PLYAPAIISLLDHIG-CQHALLELPDGE-QYKTLETFNTVMSFLLEH--NYSRDVVVIALGG 132 (390)
T ss_dssp TTCEEEEEEETTTH----HHHHHHHHHHHHHHT-CEEEEEEECSSG-GGCBHHHHHHHHHHHHHT--TCCTTCEEEEEES
T ss_pred CCCEEEEEECCcHH----HHHHHHHHHHHHHcC-CeEEEEEECCCc-CCchHHHHHHHHHHHHhc--CCCcCcEEEEECC
Confidence 45789999998654 336777888786543 3322 111111 011223444444433210 1233478999988
Q ss_pred chhHHHHHHHHhhccccCCCCCCcEEeecC
Q 011722 157 DGTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (479)
Q Consensus 157 DGTv~~Vl~~l~~~~~~~~~~~~plgiIPl 186 (479)
|++..++..+.... ...+|+..||.
T Consensus 133 -Gsv~D~ak~~Aa~~----~rgip~I~IPT 157 (390)
T 3okf_A 133 -GVIGDLVGFAAACY----QRGVDFIQIPT 157 (390)
T ss_dssp -HHHHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred -cHHhhHHHHHHHHh----cCCCCEEEeCC
Confidence 99999998775321 25688988987
No 22
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=54.18 E-value=1e+02 Score=27.76 Aligned_cols=78 Identities=15% Similarity=0.106 Sum_probs=50.7
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
...+.||.=..|- -...++....|....+ ||+.+...+ +.+..+.++++++.+ ..-.-.|.++||.+
T Consensus 21 ~~~V~IimGS~SD----~~v~~~a~~~L~~~Gi~~dv~V~SaH----R~p~~l~~~~~~a~~----~g~~ViIa~AG~aa 88 (182)
T 1u11_A 21 APVVGIIMGSQSD----WETMRHADALLTELEIPHETLIVSAH----RTPDRLADYARTAAE----RGLNVIIAGAGGAA 88 (182)
T ss_dssp CCSEEEEESSGGG----HHHHHHHHHHHHHTTCCEEEEECCTT----TCHHHHHHHHHHTTT----TTCCEEEEEEESSC
T ss_pred CCEEEEEECcHHH----HHHHHHHHHHHHHcCCCeEEEEEccc----CCHHHHHHHHHHHHh----CCCcEEEEecCchh
Confidence 4467777644443 3466666666666554 888875443 356677778766531 11234688899999
Q ss_pred hHHHHHHHHhh
Q 011722 159 TVGWVLGSVGE 169 (479)
Q Consensus 159 Tv~~Vl~~l~~ 169 (479)
-+--|+.++..
T Consensus 89 ~LpgvvA~~t~ 99 (182)
T 1u11_A 89 HLPGMCAAWTR 99 (182)
T ss_dssp CHHHHHHHHCS
T ss_pred hhHHHHHhccC
Confidence 99999998853
No 23
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=52.55 E-value=22 Score=35.14 Aligned_cols=86 Identities=9% Similarity=0.110 Sum_probs=52.5
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchh
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGT 159 (479)
++++|+..+..-. ...+++.+.|..... +.+....|.. .....+++ +.+ + ..+.|.||++|| |+
T Consensus 35 ~~~livtd~~~~~----~~~~~v~~~L~~~g~~~~~~~~~~~~----~~~~v~~~-~~~----~-~~~~d~IIavGG-Gs 99 (354)
T 3ce9_A 35 KRVSLYFGEGIYE----LFGETIEKSIKSSNIEIEAVETVKNI----DFDEIGTN-AFK----I-PAEVDALIGIGG-GK 99 (354)
T ss_dssp SEEEEEEETTHHH----HHHHHHHHHHHTTTCEEEEEEEECCC----BHHHHHHH-HTT----S-CTTCCEEEEEES-HH
T ss_pred CeEEEEECccHHH----HHHHHHHHHHHHcCCeEEEEecCCCC----CHHHHHHH-HHh----h-hcCCCEEEEECC-hH
Confidence 5899998875542 356777777765321 2211102322 12334444 332 2 245689999998 99
Q ss_pred HHHHHHHHhhccccCCCCCCcEEeecCC
Q 011722 160 VGWVLGSVGELNKQGREPVPPVAIIPLG 187 (479)
Q Consensus 160 v~~Vl~~l~~~~~~~~~~~~plgiIPlG 187 (479)
+..++..+.-. ..+|+..||.=
T Consensus 100 v~D~aK~vA~~------~~~p~i~IPTT 121 (354)
T 3ce9_A 100 AIDAVKYMAFL------RKLPFISVPTS 121 (354)
T ss_dssp HHHHHHHHHHH------HTCCEEEEESC
T ss_pred HHHHHHHHHhh------cCCCEEEecCc
Confidence 99999887643 46899999973
No 24
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=49.23 E-value=43 Score=33.43 Aligned_cols=102 Identities=14% Similarity=0.200 Sum_probs=55.4
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEE---EeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcC
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDL---SEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG 156 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl---~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GG 156 (479)
.++++|+..+..-... ..+.+++.+.|.... +++ ....|.. .....+++++.+. ..+.|.||++||
T Consensus 33 ~~~~livtd~~~~~~~-~g~~~~v~~~L~~~g-~~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIavGG 101 (387)
T 3bfj_A 33 GKKALLVTDKGLRAIK-DGAVDKTLHYLREAG-IEVAIFDGVEPNP----KDTNVRDGLAVFR-----REQCDIIVTVGG 101 (387)
T ss_dssp CSEEEEECCTTTC--C-CSSHHHHHHHHHHTT-CEEEEECCCCSSC----BHHHHHHHHHHHH-----HTTCCEEEEEES
T ss_pred CCEEEEEECcchhhcc-chHHHHHHHHHHHcC-CeEEEECCccCCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC
Confidence 3688999887665330 014556666665432 222 2222322 2234444444332 245689999999
Q ss_pred chhHHHHHHHHhhcc------------ccCCCCCCcEEeecC--CCccccc
Q 011722 157 DGTVGWVLGSVGELN------------KQGREPVPPVAIIPL--GTGNDLS 193 (479)
Q Consensus 157 DGTv~~Vl~~l~~~~------------~~~~~~~~plgiIPl--GTgNDfA 193 (479)
|++..++..+.-.- .......+|+..||. |||-...
T Consensus 102 -Gsv~D~aK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~gtgSevt 151 (387)
T 3bfj_A 102 -GSPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTTAGTASEVT 151 (387)
T ss_dssp -HHHHHHHHHHHHHHHSSSCSGGGCBSSCCCSCCCCEEEEECSTTCCGGGC
T ss_pred -cchhhHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCCcccccc
Confidence 88888887765420 000124679999997 5554443
No 25
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=49.00 E-value=28 Score=34.52 Aligned_cols=85 Identities=13% Similarity=0.126 Sum_probs=52.3
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEE--EeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDL--SEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl--~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
++++|+..+.+-. .+.+++...|.... +++ ....+.. + ....+++++.+ + ..+.|.||++|| |
T Consensus 32 ~~~livtd~~~~~----~~~~~v~~~L~~~g-~~~~~~~~~ge~--~--~~~v~~~~~~~----~-~~~~d~IIavGG-G 96 (370)
T 1jq5_A 32 NKTVVIADEIVWK----IAGHTIVNELKKGN-IAAEEVVFSGEA--S--RNEVERIANIA----R-KAEAAIVIGVGG-G 96 (370)
T ss_dssp SEEEEEECHHHHH----HTHHHHHHHHHTTT-CEEEEEECCSSC--B--HHHHHHHHHHH----H-HTTCSEEEEEES-H
T ss_pred CeEEEEEChHHHH----HHHHHHHHHHHHcC-CeEEEEeeCCCC--C--HHHHHHHHHHH----H-hcCCCEEEEeCC-h
Confidence 7899998875542 25667777776542 222 2222211 1 13344444332 2 235689999999 9
Q ss_pred hHHHHHHHHhhccccCCCCCCcEEeecC
Q 011722 159 TVGWVLGSVGELNKQGREPVPPVAIIPL 186 (479)
Q Consensus 159 Tv~~Vl~~l~~~~~~~~~~~~plgiIPl 186 (479)
++..++..+... ..+|+..||.
T Consensus 97 sv~D~aK~iA~~------~~~p~i~IPT 118 (370)
T 1jq5_A 97 KTLDTAKAVADE------LDAYIVIVPT 118 (370)
T ss_dssp HHHHHHHHHHHH------HTCEEEEEES
T ss_pred HHHHHHHHHHHh------cCCCEEEecc
Confidence 999999888753 3688999997
No 26
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=48.92 E-value=1.2e+02 Score=27.35 Aligned_cols=78 Identities=17% Similarity=0.224 Sum_probs=49.3
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
.-|.+.|+= |+...-...++....|....+ ||+.+...+ +.+..+.++++++.+ ..-.-.|.++||.+
T Consensus 12 ~~~~V~Iim---GS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaH----R~p~~l~~~~~~a~~----~g~~ViIa~AG~aa 80 (183)
T 1o4v_A 12 HVPRVGIIM---GSDSDLPVMKQAAEILEEFGIDYEITIVSAH----RTPDRMFEYAKNAEE----RGIEVIIAGAGGAA 80 (183)
T ss_dssp --CEEEEEE---SCGGGHHHHHHHHHHHHHTTCEEEEEECCTT----TCHHHHHHHHHHTTT----TTCCEEEEEEESSC
T ss_pred CCCeEEEEe---ccHHHHHHHHHHHHHHHHcCCCeEEEEEccc----CCHHHHHHHHHHHHh----CCCcEEEEecCccc
Confidence 345554443 443334567777777776554 888775433 356677788776531 11235688899999
Q ss_pred hHHHHHHHHh
Q 011722 159 TVGWVLGSVG 168 (479)
Q Consensus 159 Tv~~Vl~~l~ 168 (479)
-+--|+.++.
T Consensus 81 ~LpgvvA~~t 90 (183)
T 1o4v_A 81 HLPGMVASIT 90 (183)
T ss_dssp CHHHHHHHHC
T ss_pred ccHHHHHhcc
Confidence 9999999885
No 27
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=47.91 E-value=27 Score=35.04 Aligned_cols=93 Identities=15% Similarity=0.101 Sum_probs=52.9
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEe-ecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchh
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSE-VKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~-~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGT 159 (479)
++++|+.++.... +.+++.+.|.... +++.. .-|.-.........+++.+.+.+. .....+.||++|| |+
T Consensus 44 ~rvlIVtd~~v~~-----~~~~v~~~L~~~g-~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~--~~~r~d~IIavGG-Gs 114 (368)
T 3qbe_A 44 HKVAVVHQPGLAE-----TAEEIRKRLAGKG-VDAHRIEIPDAEAGKDLPVVGFIWEVLGRI--GIGRKDALVSLGG-GA 114 (368)
T ss_dssp SEEEEEECGGGHH-----HHHHHHHHHHHTT-CEEEEEECCSGGGGGBHHHHHHHHHHHHHH--TCCTTCEEEEEES-HH
T ss_pred CEEEEEECccHHH-----HHHHHHHHHHhcC-CcceEEEeCCCCCCCCHHHHHHHHHHHHHc--CCCCCcEEEEECC-hH
Confidence 7899999876532 3567777776543 33221 111100011223344444332210 1234689999999 99
Q ss_pred HHHHHHHHhhccccCCCCCCcEEeecC
Q 011722 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (479)
Q Consensus 160 v~~Vl~~l~~~~~~~~~~~~plgiIPl 186 (479)
+..++..+.... ...+|+..||.
T Consensus 115 v~D~ak~~Aa~~----~rgip~i~IPT 137 (368)
T 3qbe_A 115 ATDVAGFAAATW----LRGVSIVHLPT 137 (368)
T ss_dssp HHHHHHHHHHHG----GGCCEEEEEEC
T ss_pred HHHHHHHHHHHh----ccCCcEEEECC
Confidence 999988776321 14688999996
No 28
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=47.26 E-value=91 Score=27.54 Aligned_cols=75 Identities=16% Similarity=0.218 Sum_probs=48.2
Q ss_pred cEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccCC-ccEEEEEcCchh
Q 011722 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGDGT 159 (479)
Q Consensus 82 ~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~-~~~Vvv~GGDGT 159 (479)
++.||.=..| .-...++....|....+ ||+.+...+ +.+..+.++++++. .++ .-.|.++|+.+-
T Consensus 5 ~V~Iimgs~S----D~~v~~~a~~~l~~~gi~~ev~V~SaH----R~p~~~~~~~~~a~-----~~g~~ViIa~AG~aa~ 71 (163)
T 3ors_A 5 KVAVIMGSSS----DWKIMQESCNMLDYFEIPYEKQVVSAH----RTPKMMVQFASEAR-----ERGINIIIAGAGGAAH 71 (163)
T ss_dssp CEEEEESCGG----GHHHHHHHHHHHHHTTCCEEEEECCTT----TSHHHHHHHHHHTT-----TTTCCEEEEEEESSCC
T ss_pred eEEEEECcHH----HHHHHHHHHHHHHHcCCCEEEEEECCc----CCHHHHHHHHHHHH-----hCCCcEEEEECCchhh
Confidence 3555543333 23466666666665554 888775443 35667777876653 122 356888999999
Q ss_pred HHHHHHHHhh
Q 011722 160 VGWVLGSVGE 169 (479)
Q Consensus 160 v~~Vl~~l~~ 169 (479)
+.-++.++..
T Consensus 72 LpgvvA~~t~ 81 (163)
T 3ors_A 72 LPGMVASLTT 81 (163)
T ss_dssp HHHHHHHHCS
T ss_pred hHHHHHhccC
Confidence 9999998853
No 29
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=45.38 E-value=44 Score=34.86 Aligned_cols=42 Identities=29% Similarity=0.200 Sum_probs=31.2
Q ss_pred CccEEEEEcCchhHHHHHH---HHhhccccCCCCCCcEEeecCCCccccc
Q 011722 147 QKMRIVVAGGDGTVGWVLG---SVGELNKQGREPVPPVAIIPLGTGNDLS 193 (479)
Q Consensus 147 ~~~~Vvv~GGDGTv~~Vl~---~l~~~~~~~~~~~~plgiIPlGTgNDfA 193 (479)
+-+.++++|||||..-+.. .+.+. ....++--||-==-||+.
T Consensus 189 ~Id~LvvIGGdgS~~~A~~L~e~~~~~-----g~~i~vVGIPkTIDNDl~ 233 (487)
T 2hig_A 189 GVNILFTVGGDGTQRGALVISQEAKRR-----GVDISVFGVPKTIDNDLS 233 (487)
T ss_dssp TCSEEEEEECHHHHHHHHHHHHHHHHH-----TCCCEEEEEECCTTSSCC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHHHh-----CCCceEEeccccccCCCC
Confidence 5579999999999875442 22221 246789999999999996
No 30
>1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1
Probab=44.84 E-value=29 Score=34.29 Aligned_cols=89 Identities=17% Similarity=0.192 Sum_probs=52.1
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEe--ecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCc
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSE--VKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~--~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGD 157 (479)
.++++|+.++... . ..+++.+.|. .. +++.. ..+.+ .....+++.+.+.+ ......+.||++||
T Consensus 28 ~~kvliVtd~~v~----~-~~~~v~~~L~-~~-~~~~~~~ge~~~----~~~~v~~~~~~~~~--~~~~r~d~IIavGG- 93 (348)
T 1ujn_A 28 AGPAALLFDRRVE----G-FAQEVAKALG-VR-HLLGLPGGEAAK----SLEVYGKVLSWLAE--KGLPRNATLLVVGG- 93 (348)
T ss_dssp SSCEEEEEEGGGH----H-HHHHHHHHHT-CC-CEEEECCSGGGS----SHHHHHHHHHHHHH--HTCCTTCEEEEEES-
T ss_pred CCEEEEEECCcHH----H-HHHHHHHHhc-cC-eEEEECCCCCCC----CHHHHHHHHHHHHH--cCCCCCCEEEEECC-
Confidence 4789999986543 3 6667777775 22 22221 11211 22344444433221 01234578999998
Q ss_pred hhHHHHHHHHhhccccCCCCCCcEEeecC
Q 011722 158 GTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (479)
Q Consensus 158 GTv~~Vl~~l~~~~~~~~~~~~plgiIPl 186 (479)
|++..++..+.... ...+|+..||.
T Consensus 94 Gsv~D~ak~~A~~~----~rgip~i~IPT 118 (348)
T 1ujn_A 94 GTLTDLGGFVAATY----LRGVAYLAFPT 118 (348)
T ss_dssp HHHHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred cHHHHHHHHHHHHh----ccCCCEEEecC
Confidence 99999998876421 25689999996
No 31
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=44.72 E-value=48 Score=34.06 Aligned_cols=84 Identities=17% Similarity=0.171 Sum_probs=52.1
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEE--EeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCch
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDL--SEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl--~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDG 158 (479)
++++|+..+.+-. .+.+++.+.|.... +++ ....+.. .....+++++.+ ++ ..|.||++|| |
T Consensus 92 ~rvlIVtd~~~~~----~~~~~v~~~L~~~g-i~~~~~~~~ge~----~~~~v~~~~~~~----~~--~~D~IIAvGG-G 155 (450)
T 1ta9_A 92 KSAVVLADQNVWN----ICANKIVDSLSQNG-MTVTKLVFGGEA----SLVELDKLRKQC----PD--DTQVIIGVGG-G 155 (450)
T ss_dssp SEEEEEEEHHHHH----HTHHHHHHHHHHTT-CEEEEEEECSCC----CHHHHHHHHTTS----CT--TCCEEEEEES-H
T ss_pred CEEEEEECccHHH----HHHHHHHHHHHHCC-CeEEEEeeCCCC----CHHHHHHHHHHH----hh--CCCEEEEeCC-c
Confidence 4889998765543 25566777775432 222 2222211 113445554433 32 6789999999 9
Q ss_pred hHHHHHHHHhhccccCCCCCCcEEeecC
Q 011722 159 TVGWVLGSVGELNKQGREPVPPVAIIPL 186 (479)
Q Consensus 159 Tv~~Vl~~l~~~~~~~~~~~~plgiIPl 186 (479)
++..++..+... ..+|+..||.
T Consensus 156 SviD~AK~iA~~------~giP~I~IPT 177 (450)
T 1ta9_A 156 KTMDSAKYIAHS------MNLPSIICPT 177 (450)
T ss_dssp HHHHHHHHHHHH------TTCCEEEEES
T ss_pred HHHHHHHHHHHh------cCCCEEEEeC
Confidence 999999888753 4688999997
No 32
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=43.67 E-value=76 Score=31.91 Aligned_cols=100 Identities=18% Similarity=0.243 Sum_probs=55.0
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEe---ecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCc
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSE---VKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~---~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGD 157 (479)
++++|+..+.+-... .+.+++.+.|.... +++.+ ..|.. .....+++++.+. ..+.|.||++||
T Consensus 44 ~r~liVtd~~~~~~~--g~~~~v~~~L~~~g-~~~~~f~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG- 110 (407)
T 1vlj_A 44 RKVLFLYGGGSIKKN--GVYDQVVDSLKKHG-IEWVEVSGVKPNP----VLSKVHEAVEVAK-----KEKVEAVLGVGG- 110 (407)
T ss_dssp CEEEEEECSSHHHHS--SHHHHHHHHHHHTT-CEEEEECCCCSSC----BHHHHHHHHHHHH-----HTTCSEEEEEES-
T ss_pred CeEEEEECchHHhhc--cHHHHHHHHHHHcC-CeEEEecCccCCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC-
Confidence 688888864432111 15667777776432 22221 22222 1233444443321 245689999999
Q ss_pred hhHHHHHHHHhhcc------------ccCCCCCCcEEeecC--CCccccc
Q 011722 158 GTVGWVLGSVGELN------------KQGREPVPPVAIIPL--GTGNDLS 193 (479)
Q Consensus 158 GTv~~Vl~~l~~~~------------~~~~~~~~plgiIPl--GTgNDfA 193 (479)
|++..++..+.-.- .......+|+..||. |||--..
T Consensus 111 GsviD~AK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTagtgSevt 160 (407)
T 1vlj_A 111 GSVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTISATGTEMN 160 (407)
T ss_dssp HHHHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSCSSCGGGS
T ss_pred hhHHHHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCCcchhhc
Confidence 89888887775421 001124679999997 5544443
No 33
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=42.92 E-value=1.5e+02 Score=26.51 Aligned_cols=75 Identities=17% Similarity=0.185 Sum_probs=48.4
Q ss_pred cEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhH
Q 011722 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (479)
Q Consensus 82 ~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv 160 (479)
++.||.=..| .-...++....|....+ ||+.+...+ +.+..+.++++++.+ ..-.-.|.++|+.+-+
T Consensus 14 ~V~IimGS~S----D~~v~~~a~~~L~~~Gi~~ev~V~SaH----R~p~~~~~~~~~a~~----~g~~ViIa~AG~aa~L 81 (174)
T 3kuu_A 14 KIAIVMGSKS----DWATMQFAADVLTTLNVPFHVEVVSAH----RTPDRLFSFAEQAEA----NGLHVIIAGNGGAAHL 81 (174)
T ss_dssp CEEEEESSGG----GHHHHHHHHHHHHHTTCCEEEEECCTT----TCHHHHHHHHHHTTT----TTCSEEEEEEESSCCH
T ss_pred cEEEEECcHH----HHHHHHHHHHHHHHcCCCEEEEEEccc----CCHHHHHHHHHHHHh----CCCcEEEEECChhhhh
Confidence 3556653333 33466666667766554 888875443 356777788766531 1123568889999999
Q ss_pred HHHHHHHh
Q 011722 161 GWVLGSVG 168 (479)
Q Consensus 161 ~~Vl~~l~ 168 (479)
--++.++.
T Consensus 82 pgvvA~~t 89 (174)
T 3kuu_A 82 PGMLAAKT 89 (174)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhcc
Confidence 99999885
No 34
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori}
Probab=41.86 E-value=16 Score=36.21 Aligned_cols=94 Identities=14% Similarity=0.132 Sum_probs=53.0
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchh
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGT 159 (479)
.++++|+.++..... ..+++.+.|.... ..+......+ ........+++.+.+.+ ......+.||+.|| |+
T Consensus 26 ~~~~livtd~~v~~~----~~~~v~~~L~~~~-~~~~~~~~~e-~~k~~~~v~~~~~~~~~--~~~~r~d~iIavGG-Gs 96 (343)
T 3clh_A 26 KQKALIISDSIVAGL----HLPYLLERLKALE-VRVCVIESGE-KYKNFHSLERILNNAFE--MQLNRHSLMIALGG-GV 96 (343)
T ss_dssp SSCEEEEEEHHHHTT----THHHHHTTEECSC-EEEEEECSSG-GGCSHHHHHHHHHHHHH--TTCCTTCEEEEEES-HH
T ss_pred CCEEEEEECCcHHHH----HHHHHHHHHHhCC-cEEEEeCCCC-CCCCHHHHHHHHHHHHh--cCCCCCceEEEECC-hH
Confidence 478999998765432 4566777775442 2222211111 00122344444433321 01233488999998 89
Q ss_pred HHHHHHHHhhccccCCCCCCcEEeecC
Q 011722 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (479)
Q Consensus 160 v~~Vl~~l~~~~~~~~~~~~plgiIPl 186 (479)
+..++..+.... ...+|+..||.
T Consensus 97 v~D~ak~~A~~~----~rgip~i~IPT 119 (343)
T 3clh_A 97 ISDMVGFASSIY----FRGIDFINIPT 119 (343)
T ss_dssp HHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred HHHHHHHHHHHh----ccCCCEEEeCC
Confidence 999988776321 25789999995
No 35
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=41.76 E-value=4.3 Score=34.54 Aligned_cols=33 Identities=9% Similarity=0.014 Sum_probs=27.5
Q ss_pred heehhhhcCCcc-eeecccccccccccccchhhh
Q 011722 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (479)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~~ 48 (479)
.|+..+..|..| |||..|..|+-.++.+||...
T Consensus 73 fi~~~~~~~~~VlVHC~~G~sRS~~~v~ayLm~~ 106 (144)
T 3s4e_A 73 FIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMNS 106 (144)
T ss_dssp HHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHH
Confidence 345666778788 999999999999999999863
No 36
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=41.66 E-value=45 Score=33.39 Aligned_cols=101 Identities=11% Similarity=0.220 Sum_probs=56.2
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-e-EEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCc
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~-dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGD 157 (479)
.++++|+..+.-- . ..+.+++.+.|....+ + .+....|.. .....+++++.+. ..+.|.||++||
T Consensus 31 ~~~~liVtd~~~~-~--~g~~~~v~~~L~~~gi~~~~~~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG- 97 (383)
T 3ox4_A 31 FKNALIVSDAFMN-K--SGVVKQVADLLKAQGINSAVYDGVMPNP----TVTAVLEGLKILK-----DNNSDFVISLGG- 97 (383)
T ss_dssp CCEEEEEEEHHHH-H--TTHHHHHHHHHHTTTCEEEEEEEECSSC----BHHHHHHHHHHHH-----HHTCSEEEEEES-
T ss_pred CCEEEEEECCchh-h--CchHHHHHHHHHHcCCeEEEECCccCCC----CHHHHHHHHHHHH-----hcCcCEEEEeCC-
Confidence 4678888875321 1 1256777777775431 2 122233332 1234444443332 135689999999
Q ss_pred hhHHHHHHHHhhccc------------cCCCCCCcEEeecC--CCccccc
Q 011722 158 GTVGWVLGSVGELNK------------QGREPVPPVAIIPL--GTGNDLS 193 (479)
Q Consensus 158 GTv~~Vl~~l~~~~~------------~~~~~~~plgiIPl--GTgNDfA 193 (479)
|++..++..+.-.-. ......+|+..||. |||-...
T Consensus 98 Gsv~D~aK~ia~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTagtgSe~t 147 (383)
T 3ox4_A 98 GSPHDCAKAIALVATNGGEVKDYEGIDKSKKPALPLMSINTTAGTASEMT 147 (383)
T ss_dssp HHHHHHHHHHHHHHHSCSSGGGGCEESCCSSCCSCEEEEECSSSCCTTTC
T ss_pred cHHHHHHHHHHHHHhCCCCHHHHhcccccccCCCCEEEEeCCCCchhhcC
Confidence 999888877643210 00123689999997 5554443
No 37
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=41.36 E-value=95 Score=27.72 Aligned_cols=76 Identities=13% Similarity=0.088 Sum_probs=49.3
Q ss_pred cEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhH
Q 011722 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (479)
Q Consensus 82 ~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv 160 (479)
++.||.=..| .-...++....|....+ ||+.+...+ +.+..+.++++++.+ ..-.-.|.++|+.+-+
T Consensus 9 ~V~IimgS~S----D~~v~~~a~~~L~~~gi~~ev~V~SaH----R~p~~~~~~~~~a~~----~g~~ViIa~AG~aa~L 76 (174)
T 3lp6_A 9 RVGVIMGSDS----DWPVMADAAAALAEFDIPAEVRVVSAH----RTPEAMFSYARGAAA----RGLEVIIAGAGGAAHL 76 (174)
T ss_dssp SEEEEESCGG----GHHHHHHHHHHHHHTTCCEEEEECCTT----TCHHHHHHHHHHHHH----HTCCEEEEEEESSCCH
T ss_pred eEEEEECcHH----hHHHHHHHHHHHHHcCCCEEEEEECCC----CCHHHHHHHHHHHHh----CCCCEEEEecCchhhh
Confidence 4666654333 23466666667766554 888775443 356677778766531 1223578889999999
Q ss_pred HHHHHHHhh
Q 011722 161 GWVLGSVGE 169 (479)
Q Consensus 161 ~~Vl~~l~~ 169 (479)
.-++.++..
T Consensus 77 pgvvA~~t~ 85 (174)
T 3lp6_A 77 PGMVAAATP 85 (174)
T ss_dssp HHHHHHHCS
T ss_pred HHHHHhccC
Confidence 999998853
No 38
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=40.44 E-value=4.8 Score=36.30 Aligned_cols=32 Identities=13% Similarity=-0.070 Sum_probs=26.9
Q ss_pred eehhhhcCCcc-eeecccccccccccccchhhh
Q 011722 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (479)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~~ 48 (479)
|+..+..|..| |||..|-.|+..++.+||...
T Consensus 110 I~~~~~~g~~VLVHC~~G~sRS~tvv~ayLm~~ 142 (182)
T 2j16_A 110 IHAATTKREKILIHAQCGLSRSATLIIAYIMKY 142 (182)
T ss_dssp HHHHHHTTCCEEEEESSCCSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEECCCCCChHHHHHHHHHHHH
Confidence 35556678888 999999999999999999864
No 39
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=40.38 E-value=89 Score=27.43 Aligned_cols=61 Identities=16% Similarity=0.237 Sum_probs=42.2
Q ss_pred hHHHHHHHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCchhHHHHHHHHh
Q 011722 97 PELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVG 168 (479)
Q Consensus 97 ~~~~~~l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGDGTv~~Vl~~l~ 168 (479)
-...++....|....+ ||+.+...+ +.+....++++++. ..-.|.++|+.+-+--++.++.
T Consensus 12 ~~v~~~a~~~l~~~gi~~dv~V~saH----R~p~~~~~~~~~a~-------~~ViIa~AG~aa~Lpgvva~~t 73 (157)
T 2ywx_A 12 LKIAEKAVNILKEFGVEFEVRVASAH----RTPELVEEIVKNSK-------ADVFIAIAGLAAHLPGVVASLT 73 (157)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCTT----TCHHHHHHHHHHCC-------CSEEEEEEESSCCHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEccc----CCHHHHHHHHHhcC-------CCEEEEEcCchhhhHHHHHhcc
Confidence 3456666667766554 888875443 35667777776542 2457888999999999998774
No 40
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=39.86 E-value=2e+02 Score=25.43 Aligned_cols=63 Identities=16% Similarity=0.164 Sum_probs=42.4
Q ss_pred hHHHHHHHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccCC-ccEEEEEcCchhHHHHHHHHh
Q 011722 97 PELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGDGTVGWVLGSVG 168 (479)
Q Consensus 97 ~~~~~~l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~-~~~Vvv~GGDGTv~~Vl~~l~ 168 (479)
-...++....|....+ ||+.+...+ +.+..+.++++++. .++ .-.|.++|+.+-+--++.++.
T Consensus 18 ~~v~~~a~~~l~~~gi~~ev~V~SaH----Rtp~~l~~~~~~~~-----~~g~~ViIa~AG~aa~LpgvvA~~t 82 (166)
T 3oow_A 18 WSTMKECCDILDNLGIGYECEVVSAH----RTPDKMFDYAETAK-----ERGLKVIIAGAGGAAHLPGMVAAKT 82 (166)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCTT----TCHHHHHHHHHHTT-----TTTCCEEEEEECSSCCHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEcCc----CCHHHHHHHHHHHH-----hCCCcEEEEECCcchhhHHHHHhcc
Confidence 4566777777766554 888775433 34566677776543 122 346888999999999998875
No 41
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=38.44 E-value=5.6 Score=33.72 Aligned_cols=33 Identities=18% Similarity=0.216 Sum_probs=27.1
Q ss_pred heehhhhcCCcc-eeecccccccccccccchhhh
Q 011722 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (479)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~~ 48 (479)
.++..+..|..| |||..|..|+-.++.+||...
T Consensus 73 ~i~~~~~~~~~VlVHC~~G~~RS~~~~~aylm~~ 106 (144)
T 3ezz_A 73 YIDAVKDCRGRVLVHSQAGISRSATICLAYLMMK 106 (144)
T ss_dssp HHHHHHHTTCCEEEEESSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCeEEEECCCCCChhHHHHHHHHHHH
Confidence 345566677778 999999999999999999864
No 42
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=38.09 E-value=5.4 Score=34.85 Aligned_cols=32 Identities=6% Similarity=-0.198 Sum_probs=26.6
Q ss_pred eehhhhcCCcc-eeecccccccccccccchhhh
Q 011722 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (479)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~~ 48 (479)
|+..+..|..| |||..|..|+..++.+||...
T Consensus 80 I~~~~~~~~~VlVHC~~G~sRS~~vv~ayLm~~ 112 (161)
T 3emu_A 80 IIRSIQRKEGVLIISGTGVNKAPAIVIAFLMYY 112 (161)
T ss_dssp HHHHHHTTCEEEEEESSSSSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEEcCCCCcHHHHHHHHHHHHH
Confidence 35555677778 999999999999999999864
No 43
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=38.02 E-value=45 Score=33.24 Aligned_cols=99 Identities=13% Similarity=0.240 Sum_probs=55.0
Q ss_pred CCcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEE---EeecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcC
Q 011722 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDL---SEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG 156 (479)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl---~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GG 156 (479)
.++++|+..+..-.. .+.+++.+.|.... +++ ....|.. .....+++++.+. ..+.|.||++||
T Consensus 31 ~~~~livtd~~~~~~---g~~~~v~~~L~~~g-~~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIavGG 97 (386)
T 1rrm_A 31 YQKALIVTDKTLVQC---GVVAKVTDKMDAAG-LAWAIYDGVVPNP----TITVVKEGLGVFQ-----NSGADYLIAIGG 97 (386)
T ss_dssp CCEEEEECBHHHHHT---THHHHHHHHHHHTT-CEEEEECBCCSSC----BHHHHHHHHHHHH-----HHTCSEEEEEES
T ss_pred CCEEEEEECcchhhc---hHHHHHHHHHHHcC-CeEEEECCccCCC----CHHHHHHHHHHHH-----hcCcCEEEEeCC
Confidence 367888876544211 25677777776542 222 2223322 2234444444332 134589999999
Q ss_pred chhHHHHHHHHhhcccc--------------CCCCCCcEEeecC--CCcccc
Q 011722 157 DGTVGWVLGSVGELNKQ--------------GREPVPPVAIIPL--GTGNDL 192 (479)
Q Consensus 157 DGTv~~Vl~~l~~~~~~--------------~~~~~~plgiIPl--GTgNDf 192 (479)
|++..++..+...-.. .....+|+..||. |||-..
T Consensus 98 -Gsv~D~aK~iA~~~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~gtgSev 148 (386)
T 1rrm_A 98 -GSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAEV 148 (386)
T ss_dssp -HHHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSSSCCTTT
T ss_pred -hHHHHHHHHHHHHHhCCCCCCHHHHhcccccCCCCCCEEEEeCCCCchhhh
Confidence 8888888776442100 0024679999997 555443
No 44
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=37.38 E-value=1.9e+02 Score=25.33 Aligned_cols=65 Identities=9% Similarity=0.099 Sum_probs=43.4
Q ss_pred hHHHHHHHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccC-CccEEEEEcCchhHHHHHHHHhh
Q 011722 97 PELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTR-QKMRIVVAGGDGTVGWVLGSVGE 169 (479)
Q Consensus 97 ~~~~~~l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~-~~~~Vvv~GGDGTv~~Vl~~l~~ 169 (479)
-...++....|....+ |++.+...+ +.+..+.++++++. ..+ ..-.|.++|+.+-+--++.++..
T Consensus 15 ~~v~~~a~~~l~~~gi~~ev~V~saH----R~p~~~~~~~~~a~----~~~~~~ViIa~AG~aa~LpgvvA~~t~ 81 (159)
T 3rg8_A 15 MGHAEKIASELKTFGIEYAIRIGSAH----KTAEHVVSMLKEYE----ALDRPKLYITIAGRSNALSGFVDGFVK 81 (159)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCTT----TCHHHHHHHHHHHH----TSCSCEEEEEECCSSCCHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEccc----CCHHHHHHHHHHhh----hcCCCcEEEEECCchhhhHHHHHhccC
Confidence 4566677777766554 888775433 35667777776553 111 23467788999999999998853
No 45
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=37.00 E-value=1.1e+02 Score=30.01 Aligned_cols=40 Identities=30% Similarity=0.333 Sum_probs=31.5
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA 193 (479)
.+-+.++++|||||..-+. .|.+ ...|+--||-==-||+.
T Consensus 93 ~~Id~LvvIGGdgS~~~a~-~L~~-------~~i~vvgiPkTIDNDl~ 132 (320)
T 1pfk_A 93 RGIDALVVIGGDGSYMGAM-RLTE-------MGFPCIGLPGTIDNDIK 132 (320)
T ss_dssp TTCCEEEEEECHHHHHHHH-HHHH-------TTCCEEEEEBCTTCCCT
T ss_pred cCCCEEEEECCCchHHHHH-HHHh-------hCCCEEEEeccccCCCC
Confidence 3557999999999987654 4544 36788889999999997
No 46
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=35.04 E-value=1.4e+02 Score=26.50 Aligned_cols=74 Identities=14% Similarity=0.122 Sum_probs=47.7
Q ss_pred cEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccCC-ccEEEEEcCchh
Q 011722 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGDGT 159 (479)
Q Consensus 82 ~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~-~~~Vvv~GGDGT 159 (479)
.+.||. |+...-...++....|....+ |++.+...+ +.+..+.++++++. .++ .-.|.++|+.+-
T Consensus 8 ~V~Iim----gS~SD~~v~~~a~~~l~~~gi~~ev~V~SaH----R~p~~~~~~~~~a~-----~~g~~ViIa~AG~aa~ 74 (169)
T 3trh_A 8 FVAILM----GSDSDLSTMETAFTELKSLGIPFEAHILSAH----RTPKETVEFVENAD-----NRGCAVFIAAAGLAAH 74 (169)
T ss_dssp EEEEEE----SCGGGHHHHHHHHHHHHHTTCCEEEEECCTT----TSHHHHHHHHHHHH-----HTTEEEEEEEECSSCC
T ss_pred cEEEEE----CcHHhHHHHHHHHHHHHHcCCCEEEEEEccc----CCHHHHHHHHHHHH-----hCCCcEEEEECChhhh
Confidence 355554 333333466667777766554 888775443 35667777776553 122 346888899999
Q ss_pred HHHHHHHHh
Q 011722 160 VGWVLGSVG 168 (479)
Q Consensus 160 v~~Vl~~l~ 168 (479)
+.-++.++.
T Consensus 75 LpgvvA~~t 83 (169)
T 3trh_A 75 LAGTIAAHT 83 (169)
T ss_dssp HHHHHHHTC
T ss_pred hHHHHHhcC
Confidence 999998885
No 47
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=34.80 E-value=2e+02 Score=25.83 Aligned_cols=77 Identities=18% Similarity=0.191 Sum_probs=48.2
Q ss_pred CCCcE-EEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccCC-ccEEEEEc
Q 011722 79 PEAPM-VVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAG 155 (479)
Q Consensus 79 ~~~~~-lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~-~~~Vvv~G 155 (479)
.++|+ -||.=..|- -...++....|.+..+ |++.+...+ +.+..+.++++++. .++ .-.|.++|
T Consensus 20 ~mkp~V~IimGS~SD----~~v~~~a~~~L~~~gI~~e~~V~SAH----Rtp~~l~~~~~~a~-----~~g~~ViIa~AG 86 (181)
T 4b4k_A 20 HMKSLVGVIMGSTSD----WETMKYACDILDELNIPYEKKVVSAH----RTPDYMFEYAETAR-----ERGLKVIIAGAG 86 (181)
T ss_dssp --CCSEEEEESSGGG----HHHHHHHHHHHHHTTCCEEEEECCTT----TSHHHHHHHHHHTT-----TTTCCEEEEEEC
T ss_pred CCCccEEEEECCHhH----HHHHHHHHHHHHHcCCCeeEEEEccc----cChHHHHHHHHHHH-----hcCceEEEEecc
Confidence 45554 455543333 3567777777777665 888775443 24566677776653 223 34678899
Q ss_pred CchhHHHHHHHHh
Q 011722 156 GDGTVGWVLGSVG 168 (479)
Q Consensus 156 GDGTv~~Vl~~l~ 168 (479)
|.+-+--++.++.
T Consensus 87 ~aahLpGvvAa~T 99 (181)
T 4b4k_A 87 GAAHLPGMVAAKT 99 (181)
T ss_dssp SSCCHHHHHHTTC
T ss_pred ccccchhhHHhcC
Confidence 9999998887764
No 48
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=34.39 E-value=6.3 Score=33.45 Aligned_cols=32 Identities=13% Similarity=0.082 Sum_probs=26.2
Q ss_pred eehhhhcCCcc-eeecccccccccccccchhhh
Q 011722 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (479)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~~ 48 (479)
++..+..|..| |||..|-.|+-.++.+||...
T Consensus 74 i~~~~~~~~~VlVHC~~G~~RS~~~v~ayLm~~ 106 (145)
T 2nt2_A 74 ISKAKKHGSKCLVHSKMGVSRSASTVIAYAMKE 106 (145)
T ss_dssp HHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCCCCchHHHHHHHHHHHH
Confidence 44555667788 999999999999999999863
No 49
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=33.55 E-value=1e+02 Score=30.21 Aligned_cols=40 Identities=25% Similarity=0.240 Sum_probs=31.1
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA 193 (479)
.+-+.++++|||||..-+. .|.+ ...|+--||-==-||++
T Consensus 92 ~~Id~LvvIGGdgS~~~a~-~L~~-------~~i~vvgiPkTIDNDl~ 131 (319)
T 1zxx_A 92 HGIDAVVVIGGDGSYHGAL-QLTR-------HGFNSIGLPGTIDNDIP 131 (319)
T ss_dssp TTCCEEEEEECHHHHHHHH-HHHH-------TTCCEEEEEEETTCCCT
T ss_pred hCCCEEEEECCchHHHHHH-HHHH-------hCCCEEEEeecccCCCC
Confidence 3557999999999987654 4444 35788889999999997
No 50
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=30.57 E-value=7.7 Score=33.04 Aligned_cols=32 Identities=13% Similarity=0.083 Sum_probs=26.1
Q ss_pred eehhhhcCCcc-eeecccccccccccccchhhh
Q 011722 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (479)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~~ 48 (479)
++..+..|..+ |||..|..|+-.++.+||...
T Consensus 82 i~~~~~~~~~vlVHC~~G~~Rsg~~~~a~l~~~ 114 (157)
T 3rgo_A 82 ALKYQALGQCVYVHCKAGRSRSATMVAAYLIQV 114 (157)
T ss_dssp HHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEEEECCCCCChHHHHHHHHHHHH
Confidence 34555667777 999999999999999998864
No 51
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=30.48 E-value=8 Score=32.89 Aligned_cols=31 Identities=19% Similarity=0.263 Sum_probs=25.5
Q ss_pred eehhhhcCCcc-eeecccccccccccccchhh
Q 011722 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRV 47 (479)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~ 47 (479)
++..+..|..| |||..|..|+-.++.+||..
T Consensus 76 i~~~~~~~~~VlVHC~~G~~RSg~~~~ayl~~ 107 (149)
T 1zzw_A 76 IEEAHQCGKGLLIHCQAGVSRSATIVIAYLMK 107 (149)
T ss_dssp HHHHHHTTCEEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCCCCCHHHHHHHHHHHH
Confidence 34555567778 99999999999999999985
No 52
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=29.92 E-value=8.3 Score=33.59 Aligned_cols=31 Identities=16% Similarity=0.018 Sum_probs=25.6
Q ss_pred ehhhhcCCcc-eeecccccccccccccchhhh
Q 011722 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (479)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~~ 48 (479)
+..+..|..| |||..|..|+-.++.+||...
T Consensus 77 ~~~~~~~~~VlVHC~aG~~RSg~~~~ayLm~~ 108 (165)
T 1wrm_A 77 HECRLRGESCLVHCLAGVSRSVTLVIAYIMTV 108 (165)
T ss_dssp HHHHHTTCEEEEECSSSSSHHHHHHHHHHHHT
T ss_pred HHHHHCCCeEEEECCCCCChhHHHHHHHHHHH
Confidence 4455567778 999999999999999999864
No 53
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=29.89 E-value=8.6 Score=33.38 Aligned_cols=31 Identities=16% Similarity=0.048 Sum_probs=25.4
Q ss_pred ehhhhcCCcc-eeecccccccccccccchhhh
Q 011722 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (479)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~~ 48 (479)
+..+..|..| |||..|-.|+-.++.+||...
T Consensus 83 ~~~~~~~~~VlVHC~aG~~RSg~~~~ayLm~~ 114 (164)
T 2hcm_A 83 EAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRH 114 (164)
T ss_dssp HHHHHTTCEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCCchHHHHHHHHHHHH
Confidence 4455567777 999999999999999998864
No 54
>2x9a_A Attachment protein G3P; transmembrane, phage infection, phage recognition, HOST-VIRU interaction, virion; 2.47A {Enterobacteria phage IF1} PDB: 2x9b_A
Probab=29.88 E-value=13 Score=27.58 Aligned_cols=12 Identities=17% Similarity=0.053 Sum_probs=10.5
Q ss_pred cEEEEEcCchhH
Q 011722 149 MRIVVAGGDGTV 160 (479)
Q Consensus 149 ~~Vvv~GGDGTv 160 (479)
.-|+||+||||+
T Consensus 39 tGViVg~~dgtv 50 (65)
T 2x9a_A 39 SGIGIGYDNDTS 50 (65)
T ss_dssp EEEEEEETTTTE
T ss_pred eeEEEECCCCCE
Confidence 469999999997
No 55
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=28.96 E-value=98 Score=29.52 Aligned_cols=29 Identities=10% Similarity=0.084 Sum_probs=23.0
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecC
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPl 186 (479)
...|.+|..|| +|+.|++. ...|.-+||.
T Consensus 224 ~~aDlvI~~gG-~T~~E~~~-----------~g~P~i~ip~ 252 (282)
T 3hbm_A 224 NESNKLIISAS-SLVNEALL-----------LKANFKAICY 252 (282)
T ss_dssp HTEEEEEEESS-HHHHHHHH-----------TTCCEEEECC
T ss_pred HHCCEEEECCc-HHHHHHHH-----------cCCCEEEEeC
Confidence 35678999999 99999984 4567778885
No 56
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=28.50 E-value=37 Score=30.22 Aligned_cols=59 Identities=19% Similarity=0.076 Sum_probs=31.7
Q ss_pred EEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHHH
Q 011722 153 VAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRAS 218 (479)
Q Consensus 153 v~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i~ 218 (479)
..|||-|- +++.-+... .....|-+.+|=+|| ||+++..+-.. +....+.+..+++.+.
T Consensus 57 Gi~G~tt~-~~l~r~~~~---v~~~~Pd~vvi~~G~-ND~~~~~~~~~--~~~~~~~l~~ii~~~~ 115 (209)
T 4hf7_A 57 GISGQTSY-QFLLRFRED---VINLSPALVVINAGT-NDVAENTGAYN--EDYTFGNIASMAELAK 115 (209)
T ss_dssp ECTTCCHH-HHHHHHHHH---TGGGCCSEEEECCCH-HHHTTSSSSCC--HHHHHHHHHHHHHHHH
T ss_pred ccCcccHH-HHHHHHHHH---HHhcCCCEEEEEeCC-CcCcccccccc--HHHHHHHHHHhhHHHh
Confidence 46888664 344433321 112457788898997 99987553210 1122334555555543
No 57
>3gw6_A Endo-N-acetylneuraminidase; chaperone, glycosidase, hydrolase; HET: TAM; 2.60A {Enterobacteria phage K1F}
Probab=28.34 E-value=19 Score=34.57 Aligned_cols=15 Identities=40% Similarity=0.694 Sum_probs=12.3
Q ss_pred ccEEEEEcCchhHHH
Q 011722 148 KMRIVVAGGDGTVGW 162 (479)
Q Consensus 148 ~~~Vvv~GGDGTv~~ 162 (479)
..|+|+|||+||-+.
T Consensus 46 ~q~~i~~g~~~t~~~ 60 (275)
T 3gw6_A 46 GQRIIFCGGEGTSST 60 (275)
T ss_dssp GCEEEEESSSSSSTT
T ss_pred ccEEEEecCCCCCCC
Confidence 359999999999653
No 58
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=27.91 E-value=10 Score=33.51 Aligned_cols=31 Identities=13% Similarity=0.012 Sum_probs=24.9
Q ss_pred ehhhhc-CCcc-eeecccccccccccccchhhh
Q 011722 18 DSIRGC-GLSG-MRIDKEDLRRKLSIPEYLRVA 48 (479)
Q Consensus 18 ~~~~~~-~~~~-~~~~~~~~~~~~~~~~yl~~~ 48 (479)
+..+.. |..| |||..|..|+-.++.+||...
T Consensus 108 ~~~~~~~~~~VlVHC~~G~~RSg~~v~ayLm~~ 140 (183)
T 3f81_A 108 DQALAQKNGRVLVHCREGYSRSPTLVIAYLMMR 140 (183)
T ss_dssp HHHHHSTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCCeEEEECCCCcchHHHHHHHHHHHH
Confidence 344444 6777 999999999999999999864
No 59
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=27.54 E-value=36 Score=33.63 Aligned_cols=90 Identities=11% Similarity=0.116 Sum_probs=47.9
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEEe---ecCccceechhhHHHHHHhcchhhhhccCCccEEEEEcCc
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSE---VKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv~dl~~---~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Vvv~GGD 157 (479)
++++|+.++... ....+++.+.| ....+++.+ ..+.+ .....+++.+.+.+ ......+.||++||
T Consensus 32 ~~~liVtd~~~~----~~~~~~v~~~L-~~g~~~~~~~~~~e~~p----~~~~v~~~~~~~~~--~~~~r~d~iIavGG- 99 (354)
T 1xah_A 32 DQSFLLIDEYVN----QYFANKFDDIL-SYENVHKVIIPAGEKTK----TFEQYQETLEYILS--HHVTRNTAIIAVGG- 99 (354)
T ss_dssp SCEEEEEEHHHH----HHHHHHHC-------CEEEEEECSGGGGC----SHHHHHHHHHHHHT--TCCCTTCEEEEEES-
T ss_pred CeEEEEECCcHH----HHHHHHHHHHH-hcCCeEEEEECCCCCCC----CHHHHHHHHHHHHH--cCCCCCceEEEECC-
Confidence 789999886432 22566676666 332122221 22211 22334444433321 01122478999998
Q ss_pred hhHHHHHHHHhhccccCCCCCCcEEeecC
Q 011722 158 GTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (479)
Q Consensus 158 GTv~~Vl~~l~~~~~~~~~~~~plgiIPl 186 (479)
|++..++..+.... ...+|+..||.
T Consensus 100 Gsv~D~ak~vA~~~----~rgip~i~IPT 124 (354)
T 1xah_A 100 GATGDFAGFVAATL----LRGVHFIQVPT 124 (354)
T ss_dssp HHHHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred hHHHHHHHHHHHHh----ccCCCEEEECC
Confidence 99999998876432 25789999997
No 60
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=27.50 E-value=10 Score=33.94 Aligned_cols=31 Identities=13% Similarity=-0.078 Sum_probs=25.4
Q ss_pred ehhhhcCCcc-eeecccccccccccccchhhh
Q 011722 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (479)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~~ 48 (479)
+..+..|..| |||..|-.|+-.++.+||...
T Consensus 91 ~~~~~~~~~VLVHC~aG~sRS~~vv~ayLm~~ 122 (188)
T 2esb_A 91 HSVEMKQGRTLLHCAAGVSRSAALCLAYLMKY 122 (188)
T ss_dssp HHHHHTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCCchHHHHHHHHHHHH
Confidence 4555567788 999999999999899999763
No 61
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=26.51 E-value=10 Score=33.34 Aligned_cols=33 Identities=12% Similarity=-0.004 Sum_probs=26.6
Q ss_pred heehhhhcCCcc-eeecccccccccccccchhhh
Q 011722 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (479)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~~ 48 (479)
.++..+..|..| |||..|-.|+-.++.+||...
T Consensus 100 ~i~~~~~~~~~VlVHC~aG~~RSg~~v~aylm~~ 133 (176)
T 3cm3_A 100 FLSKCDQRNEPVLVHSAAGVNRSGAMILAYLMSK 133 (176)
T ss_dssp HHHHHHHHTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCcEEEECCcCCCHHHHHHHHHHHHH
Confidence 345555567777 999999999999999999764
No 62
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=25.66 E-value=13 Score=34.34 Aligned_cols=32 Identities=22% Similarity=0.151 Sum_probs=26.2
Q ss_pred eehhhhcCCcc-eeecccccccccccccchhhh
Q 011722 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (479)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~~ 48 (479)
++..+..|..| |||..|..|+-.++.+||...
T Consensus 76 I~~~~~~~~~VLVHC~aG~sRSgtvv~AYLm~~ 108 (211)
T 2g6z_A 76 IDCVREKGGKVLVHSEAGISRSPTICMAYLMKT 108 (211)
T ss_dssp HHHHHHTTCCEEEEESSSSSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEECCCCCCcHHHHHHHHHHHH
Confidence 34555667778 999999999999999999864
No 63
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=25.49 E-value=12 Score=31.97 Aligned_cols=30 Identities=13% Similarity=-0.013 Sum_probs=24.5
Q ss_pred ehhhhcCCcc-eeecccccccccccccchhh
Q 011722 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRV 47 (479)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~ 47 (479)
+..+..|..| |||.-|..|+-.++.+||..
T Consensus 84 ~~~~~~~~~vlvHC~aG~~RS~~~~~ayl~~ 114 (154)
T 2r0b_A 84 DGSLQMGGKVLVHGNAGISRSAAFVIAYIME 114 (154)
T ss_dssp HHHHHTTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEcCCCCChHHHHHHHHHHH
Confidence 3445567777 99999999999999999875
No 64
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=25.36 E-value=1.8e+02 Score=29.53 Aligned_cols=46 Identities=20% Similarity=0.172 Sum_probs=30.8
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA 193 (479)
.+-+.++++|||||..-+.. |.+.-. ......++--||-==-||++
T Consensus 103 ~~Id~Lv~IGGdgS~~~A~~-L~~~~~-~~g~~i~vIGiPkTIDNDl~ 148 (419)
T 3hno_A 103 HDIGYFFYNGGGDSADTCLK-VSQLSG-TLGYPIQAIHVPKTVDNDLP 148 (419)
T ss_dssp TTEEEEEEEESHHHHHHHHH-HHHHHH-HTTCCCEEEEEECCTTCCCS
T ss_pred cCCCEEEEeCCchHHHHHHH-HHHHHH-HhCCCccEEEecccccCCCc
Confidence 35578999999999865542 322100 01245788889988899996
No 65
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=25.04 E-value=1.1e+02 Score=34.59 Aligned_cols=46 Identities=13% Similarity=0.123 Sum_probs=31.5
Q ss_pred CccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc
Q 011722 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (479)
Q Consensus 147 ~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA 193 (479)
+-+.+|++|||||..-+ ..|.+.........+|+--||-==-||++
T Consensus 688 ~Id~LvvIGGdgS~~~a-~~L~~~~~~y~~~~I~vVGIPkTIDNDl~ 733 (989)
T 3opy_A 688 KFDGLIIIGGFEAFTAL-YELDAARAQYPIFNIPMCCLPATVSNNVP 733 (989)
T ss_dssp TCSEEEEEESHHHHHHH-HHHHHHTTTCGGGCSCEEEEEBCSSCCCT
T ss_pred CCCEEEEeCCchHHHHH-HHHHHHHhhCCCcCCcEEeccccccCCCC
Confidence 56799999999998544 44543211000126788889999999995
No 66
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=24.82 E-value=12 Score=34.54 Aligned_cols=31 Identities=13% Similarity=-0.019 Sum_probs=24.9
Q ss_pred ehhh-hcCCcc-eeecccccccccccccchhhh
Q 011722 18 DSIR-GCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (479)
Q Consensus 18 ~~~~-~~~~~~-~~~~~~~~~~~~~~~~yl~~~ 48 (479)
+..+ ..|..| |||..|..|+-.++.+||...
T Consensus 132 ~~~l~~~~~~VLVHC~aG~sRS~tvv~aYLm~~ 164 (219)
T 2y96_A 132 DRALSDDHSKILVHCVMGRSRSATLVLAYLMIH 164 (219)
T ss_dssp HHHHTSTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHccCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 4444 456677 999999999999999999864
No 67
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=24.60 E-value=12 Score=32.20 Aligned_cols=31 Identities=13% Similarity=-0.079 Sum_probs=25.2
Q ss_pred ehhhhcCCcc-eeecccccccccccccchhhh
Q 011722 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (479)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~~ 48 (479)
+..+..|..| |||..|..|+-.++.+||...
T Consensus 79 ~~~~~~~~~VlVHC~~G~~RS~~vv~ayLm~~ 110 (155)
T 2hxp_A 79 DEALSQNCGVLVHSLAGVSRSVTVTVAYLMQK 110 (155)
T ss_dssp HHHHHTTCEEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCcEEEECCCCCchhHHHHHHHHHHH
Confidence 4455567778 999999999999999998753
No 68
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=24.58 E-value=12 Score=31.78 Aligned_cols=30 Identities=13% Similarity=-0.037 Sum_probs=23.8
Q ss_pred hhhh-cCCcc-eeecccccccccccccchhhh
Q 011722 19 SIRG-CGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (479)
Q Consensus 19 ~~~~-~~~~~-~~~~~~~~~~~~~~~~yl~~~ 48 (479)
..+. .+..| |||..|..|+-.++.+||...
T Consensus 79 ~~~~~~~~~vlVHC~aG~~RSg~~~~ayl~~~ 110 (151)
T 2e0t_A 79 RALSQPGGKILVHCAVGVSRSATLVLAYLMLY 110 (151)
T ss_dssp HHHHSTTCCEEEECSSSSHHHHHHHHHHHHHH
T ss_pred HHHhcCCCcEEEECCCCCChHHHHHHHHHHHH
Confidence 3443 56677 999999999998888998764
No 69
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=23.94 E-value=2.4e+02 Score=28.71 Aligned_cols=76 Identities=17% Similarity=0.183 Sum_probs=49.0
Q ss_pred CcEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEEeecCccceechhhHHHHHHhcchhhhhccCCc--cEEEEEcCc
Q 011722 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQK--MRIVVAGGD 157 (479)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~qv-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~--~~Vvv~GGD 157 (479)
..+.||.=..| --...++....|....+ |++.+..- ++.+..+.++++++. .++. -.|.++||.
T Consensus 266 ~~V~Ii~gs~S----D~~~~~~a~~~l~~~gi~~~v~V~sa----HR~p~~~~~~~~~~~-----~~g~~~viIa~AG~~ 332 (425)
T 2h31_A 266 CRVVVLMGSTS----DLGHCEKIKKACGNFGIPCELRVTSA----HKGPDETLRIKAEYE-----GDGIPTVFVAVAGRS 332 (425)
T ss_dssp CEEEEEESCGG----GHHHHHHHHHHHHHTTCCEEEEECCT----TTCHHHHHHHHHHHH-----TTCCCEEEEEECCSS
T ss_pred CeEEEEecCcc----cHHHHHHHHHHHHHcCCceEEeeeec----cCCHHHHHHHHHHHH-----HCCCCeEEEEEcCcc
Confidence 45666654333 33466666666665554 88877543 335667777877653 2233 467888999
Q ss_pred hhHHHHHHHHhh
Q 011722 158 GTVGWVLGSVGE 169 (479)
Q Consensus 158 GTv~~Vl~~l~~ 169 (479)
|.+--|+.++..
T Consensus 333 a~Lpgvva~~t~ 344 (425)
T 2h31_A 333 NGLGPVMSGNTA 344 (425)
T ss_dssp CCHHHHHHHHCS
T ss_pred cchHhHHhccCC
Confidence 999999998853
No 70
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=23.91 E-value=13 Score=32.92 Aligned_cols=31 Identities=19% Similarity=0.263 Sum_probs=25.5
Q ss_pred eehhhhcCCcc-eeecccccccccccccchhh
Q 011722 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRV 47 (479)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~ 47 (479)
++..+..|..| |||..|-.|+-.++.+||..
T Consensus 80 i~~~~~~~~~VlVHC~aG~~RSg~~v~ayLm~ 111 (177)
T 2oud_A 80 IEEAHQCGKGLLIHCQAGVSRSATIVIAYLMK 111 (177)
T ss_dssp HHHHHHTTCEEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHhcCCcEEEEcCCCCCchHHHHHHHHHH
Confidence 34555567778 99999999999999999985
No 71
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=23.68 E-value=1.4e+02 Score=29.14 Aligned_cols=44 Identities=27% Similarity=0.330 Sum_probs=33.1
Q ss_pred CccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc---cccCC
Q 011722 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS---RSFGW 198 (479)
Q Consensus 147 ~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA---rslg~ 198 (479)
+-+.++++|||||..-+. .|.+ ...|+--||-==-||+. +++|.
T Consensus 93 ~Id~L~~IGGdgS~~~a~-~l~~-------~~i~vigiPkTIDNDl~~td~t~Gf 139 (319)
T 4a3s_A 93 GIEGLVVIGGDGSYMGAK-KLTE-------HGFPCVGVPGTIDNDIPGTDFTIGF 139 (319)
T ss_dssp TCCEEEEEECTTHHHHHH-HHHH-------TTCCEEEEEEETTCCCTTCSCCEEH
T ss_pred CCCEEEEeCCcHHHHHHH-HHhc-------cCCcEEEeeccccCCCCCCCCCCCH
Confidence 457899999999987543 4544 46788889999999996 45554
No 72
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=23.45 E-value=1.3e+02 Score=33.85 Aligned_cols=47 Identities=13% Similarity=0.113 Sum_probs=31.9
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA 193 (479)
.+-+.+|++|||||..-+. .|.+..........|+--||-==-||++
T Consensus 661 ~~Id~LvvIGGdgS~~~a~-~L~~~~~~~~~~~i~vVGIPkTIDNDl~ 707 (941)
T 3opy_B 661 YGFDGLILVGGFEAFISLH-QLERARINYPSLRIPLVLIPATISNNVP 707 (941)
T ss_dssp TTCSEEEEEESHHHHHHHH-HHHHGGGTCGGGCSCEEEEEBCSSCCCT
T ss_pred cCCCEEEEeCCchHHHHHH-HHHHHHHhcCccCCcEEeeeccccCCCC
Confidence 3567999999999986543 3433211001136888899999999996
No 73
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=22.80 E-value=15 Score=31.58 Aligned_cols=31 Identities=13% Similarity=0.008 Sum_probs=24.6
Q ss_pred ehhhhcCCcc-eeecccccccccccccchhhh
Q 011722 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (479)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~~ 48 (479)
+..+..|..| |||..|-.|+-.++.+||...
T Consensus 78 ~~~~~~~~~VlVHC~aG~~RSg~~~~aylm~~ 109 (160)
T 1yz4_A 78 HCCRLNGGNCLVHSFAGISRSTTIVTAYVMTV 109 (160)
T ss_dssp HHHHHTTCCEEEEETTSSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCeEEEECCCCCchHHHHHHHHHHHH
Confidence 4445567777 999999999998888998653
No 74
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=22.43 E-value=13 Score=31.12 Aligned_cols=31 Identities=16% Similarity=0.026 Sum_probs=24.6
Q ss_pred ehhhhcCCcc-eeecccccccccccccchhhh
Q 011722 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (479)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~~ 48 (479)
+..+..+..+ |||..|..|+-.++..||...
T Consensus 83 ~~~~~~~~~vlVHC~aG~~Rsg~~~~~~l~~~ 114 (151)
T 2img_A 83 DEANARGEAVGVHCALGFGRTGTMLACYLVKE 114 (151)
T ss_dssp HHHHHTTCEEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHhCCCcEEEECCCCCChHHHHHHHHHHHH
Confidence 3444456667 999999999999999998764
No 75
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=22.10 E-value=80 Score=33.45 Aligned_cols=46 Identities=20% Similarity=0.169 Sum_probs=31.4
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccc
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfA 193 (479)
.+-+.+|++|||||..-+.. |.+.- .......++--||-==-||++
T Consensus 165 ~~Id~LvvIGGdgS~~~A~~-L~e~~-~~~~~~i~vIGiPkTIDNDl~ 210 (555)
T 2f48_A 165 NNLNAIIIIGGDDSNTNAAI-LAEYF-KKNGENIQVIGVPKTIDADLR 210 (555)
T ss_dssp TTCSEEEEEESHHHHHHHHH-HHHHH-HHTTCCCEEEEEEEETTCCCC
T ss_pred cCCCEEEEeCCCcHHHHHHH-HHHHH-HHhCCCCcEEEeccccCCCCC
Confidence 35579999999999765543 22210 001346888889998899995
No 76
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=21.59 E-value=14 Score=31.10 Aligned_cols=30 Identities=17% Similarity=0.027 Sum_probs=24.4
Q ss_pred ehhhhcCCcc-eeecccccccccccccchhh
Q 011722 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRV 47 (479)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~~yl~~ 47 (479)
+..+..+..+ |||..|..|+-.++..||..
T Consensus 82 ~~~~~~~~~vlVHC~~G~~Rsg~~~a~~l~~ 112 (150)
T 4erc_A 82 DEANARGEAVGVHCALGFGRTGTMLACYLVK 112 (150)
T ss_dssp HHHHHTTCEEEEECSSSSHHHHHHHHHHHHH
T ss_pred HHHHHCCCCEEEECCCCCCHHHHHHHHHHHH
Confidence 4444566667 99999999999999999875
No 77
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=20.87 E-value=1.6e+02 Score=32.46 Aligned_cols=66 Identities=21% Similarity=0.199 Sum_probs=40.8
Q ss_pred CCccEEEEEcCchhHHHHHHHHhhccccCCCCCCcEEeecCCCccccccccCCCCCCCCcHHHHHHHHHHHH
Q 011722 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRA 217 (479)
Q Consensus 146 ~~~~~Vvv~GGDGTv~~Vl~~l~~~~~~~~~~~~plgiIPlGTgNDfArslg~g~~~p~~~~~al~~~l~~i 217 (479)
.+-+.+|++|||||..-+.. |.+..........|+--||-==-||++- ..+..-...|++.+.+.+
T Consensus 488 ~~Id~LvvIGGdgS~~~a~~-L~~~~~~~~~~~i~vvgiPkTIDNDl~g-----TD~TiGfdTA~~~~~~ai 553 (762)
T 3o8l_A 488 FNIQGLVIIGGFEAYTGGLE-LMEGRKQFDELCIPFVVIPATVSNNVPG-----SDFSVGADTALNTICTTC 553 (762)
T ss_dssp TTCCCEEEEESHHHHHHHHH-HHHHHHHCSTTCSCEEEEEBCTTCCCTT-----CSCCBTHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCchHHHHHHH-HHHHHHhccccCCCEEeeccccCCCCCC-----CcCCCChHHHHHHHHHHH
Confidence 35678999999999876653 2211000012368888899999999962 222333445666655544
No 78
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=20.80 E-value=16 Score=33.09 Aligned_cols=26 Identities=8% Similarity=-0.107 Sum_probs=22.6
Q ss_pred cCCcc-eeecccccccccccccchhhh
Q 011722 23 CGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (479)
Q Consensus 23 ~~~~~-~~~~~~~~~~~~~~~~yl~~~ 48 (479)
.|..| |||..|..|+-.++.+||...
T Consensus 130 ~~~~VLVHC~aG~sRS~tvv~aYLm~~ 156 (205)
T 2pq5_A 130 PQGRVLVHCAMGVSRSATLVLAFLMIY 156 (205)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHHH
Confidence 46677 999999999999999999864
No 79
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=20.75 E-value=1.2e+02 Score=26.81 Aligned_cols=49 Identities=12% Similarity=0.125 Sum_probs=30.9
Q ss_pred hhhHHHHHHhcchhhhhccCCccEEEEEcC-chhHHHHHHHHhhccccCCCCCCcEEeecCC
Q 011722 127 GLACLEKLAELGDFCAKDTRQKMRIVVAGG-DGTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (479)
Q Consensus 127 ~~~~~~~la~~~~~~a~~~~~~~~Vvv~GG-DGTv~~Vl~~l~~~~~~~~~~~~plgiIPlG 187 (479)
+...+++|++... .....||.-|| -|--..+..+..+. ....+||||-.
T Consensus 30 ~~~~A~~lg~~La------~~g~~lVsGGg~~Gim~aa~~gAl~~------gG~tigVlP~~ 79 (176)
T 2iz6_A 30 QLVMANELGKQIA------THGWILLTGGRSLGVMHEAMKGAKEA------GGTTIGVLPGP 79 (176)
T ss_dssp HHHHHHHHHHHHH------HTTCEEEEECSSSSHHHHHHHHHHHT------TCCEEEEECC-
T ss_pred HHHHHHHHHHHHH------HCCCEEEECCCccCHhHHHHHHHHHc------CCEEEEEeCch
Confidence 3444555554432 12346777777 78888888887663 45789999865
No 80
>4dxr_B Nesprin-1; beta-sandwich, LINC complex, structural protein; HET: DMU; 2.32A {Homo sapiens} PDB: 4dxs_B*
Probab=20.55 E-value=30 Score=22.39 Aligned_cols=11 Identities=36% Similarity=0.477 Sum_probs=9.0
Q ss_pred CccccccccCC
Q 011722 188 TGNDLSRSFGW 198 (479)
Q Consensus 188 TgNDfArslg~ 198 (479)
-.|+|||||..
T Consensus 14 ~aNNFARSF~p 24 (35)
T 4dxr_B 14 LSNNFARSFHP 24 (35)
T ss_dssp TCCTGGGSSSC
T ss_pred hhhhHHHHhHH
Confidence 37999999964
Done!