Query 011724
Match_columns 478
No_of_seqs 124 out of 1416
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 14:03:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011724.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011724hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 7.5E-65 2.6E-69 517.1 40.9 427 8-460 12-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 2.1E-61 7E-66 500.5 39.2 447 1-462 1-480 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 7E-59 2.4E-63 480.3 45.6 440 8-472 5-478 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 7.5E-59 2.6E-63 477.0 41.0 436 1-461 1-452 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 9.4E-57 3.2E-61 462.6 39.4 426 1-460 1-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 4.1E-43 1.4E-47 358.1 34.8 386 7-460 10-420 (424)
7 4amg_A Snogd; transferase, pol 100.0 2.1E-42 7.2E-47 349.7 23.2 352 8-459 21-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 5.1E-41 1.7E-45 341.7 28.9 383 10-470 1-409 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 2.8E-40 9.4E-45 336.4 24.2 378 10-467 1-407 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 1.2E-38 4.2E-43 323.8 35.4 370 5-459 16-411 (415)
11 3ia7_A CALG4; glycosysltransfe 100.0 1.5E-37 5.3E-42 313.9 35.7 374 8-459 3-396 (402)
12 3h4t_A Glycosyltransferase GTF 100.0 8.7E-38 3E-42 316.6 24.2 354 10-461 1-382 (404)
13 2yjn_A ERYCIII, glycosyltransf 100.0 1.3E-36 4.3E-41 311.7 29.3 366 6-460 17-434 (441)
14 2iyf_A OLED, oleandomycin glyc 100.0 7.2E-36 2.5E-40 304.9 32.5 355 7-440 5-383 (430)
15 2p6p_A Glycosyl transferase; X 100.0 6.8E-36 2.3E-40 300.6 30.8 346 10-461 1-379 (384)
16 4fzr_A SSFS6; structural genom 100.0 1.2E-34 4.2E-39 292.8 24.1 338 6-440 12-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 1.1E-33 3.6E-38 286.0 26.4 342 7-459 18-395 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 1.3E-32 4.5E-37 277.2 28.3 346 9-459 1-386 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 5.6E-31 1.9E-35 266.9 30.7 353 6-459 17-406 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 1.8E-26 6.2E-31 230.1 25.2 308 10-440 3-337 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 7.1E-25 2.4E-29 194.4 16.5 154 267-440 6-170 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 1.2E-18 4.1E-23 173.0 24.1 293 10-418 7-322 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 6.8E-14 2.3E-18 132.9 18.5 109 283-404 156-265 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.5 4E-14 1.4E-18 129.2 9.2 128 282-418 26-196 (224)
25 3c48_A Predicted glycosyltrans 99.4 3.1E-10 1.1E-14 115.0 31.7 345 5-428 16-395 (438)
26 3okp_A GDP-mannose-dependent a 99.3 9.1E-10 3.1E-14 109.6 28.9 350 7-463 2-380 (394)
27 1v4v_A UDP-N-acetylglucosamine 99.3 9.3E-11 3.2E-15 116.5 21.4 134 284-432 198-342 (376)
28 3fro_A GLGA glycogen synthase; 99.2 1.2E-08 4.2E-13 102.9 31.2 387 8-462 1-430 (439)
29 2gek_A Phosphatidylinositol ma 99.2 7.7E-09 2.6E-13 103.3 29.4 310 5-430 16-355 (406)
30 3dzc_A UDP-N-acetylglucosamine 99.2 2.4E-10 8.2E-15 114.6 17.7 323 6-432 22-375 (396)
31 2r60_A Glycosyl transferase, g 99.2 1.2E-08 4.2E-13 105.2 29.4 78 343-429 333-429 (499)
32 1vgv_A UDP-N-acetylglucosamine 99.2 1.2E-09 4E-14 108.7 19.7 134 283-430 204-348 (384)
33 3ot5_A UDP-N-acetylglucosamine 99.2 2.3E-09 7.9E-14 107.7 21.9 104 344-461 281-393 (403)
34 2iuy_A Avigt4, glycosyltransfe 99.1 2.1E-09 7.3E-14 105.1 18.0 117 287-420 164-307 (342)
35 2jjm_A Glycosyl transferase, g 99.1 1.7E-07 5.9E-12 93.3 30.3 346 9-461 15-384 (394)
36 2iw1_A Lipopolysaccharide core 99.0 4.2E-07 1.4E-11 89.5 30.0 132 285-433 196-346 (374)
37 3beo_A UDP-N-acetylglucosamine 99.0 2.9E-08 9.9E-13 98.1 19.7 77 345-430 263-348 (375)
38 4hwg_A UDP-N-acetylglucosamine 98.9 1E-08 3.4E-13 102.2 15.1 316 2-420 2-341 (385)
39 2x6q_A Trehalose-synthase TRET 98.8 2.8E-06 9.4E-11 85.2 29.2 105 343-461 291-413 (416)
40 1rzu_A Glycogen synthase 1; gl 98.7 3E-05 1E-09 79.3 30.8 157 286-463 292-476 (485)
41 3s28_A Sucrose synthase 1; gly 98.6 4.3E-06 1.5E-10 90.4 22.1 106 343-460 638-767 (816)
42 2vsy_A XCC0866; transferase, g 98.6 3.7E-05 1.3E-09 80.3 28.7 107 345-461 434-558 (568)
43 2qzs_A Glycogen synthase; glyc 98.5 0.00041 1.4E-08 70.7 33.6 156 286-462 293-476 (485)
44 3oy2_A Glycosyltransferase B73 98.4 8.3E-05 2.9E-09 74.1 25.2 102 347-461 256-389 (413)
45 2f9f_A First mannosyl transfer 98.3 5E-06 1.7E-10 73.0 11.2 132 287-435 25-174 (177)
46 2hy7_A Glucuronosyltransferase 98.2 0.00013 4.4E-09 73.0 21.8 74 343-420 263-351 (406)
47 2xci_A KDO-transferase, 3-deox 98.1 0.0018 6.2E-08 63.8 25.7 93 345-439 260-364 (374)
48 3tov_A Glycosyl transferase fa 97.8 0.0012 4.1E-08 64.4 19.2 111 3-149 2-116 (349)
49 1psw_A ADP-heptose LPS heptosy 97.6 0.0068 2.3E-07 58.7 20.9 104 10-149 1-107 (348)
50 3qhp_A Type 1 capsular polysac 97.6 0.00057 1.9E-08 58.6 11.2 128 285-429 2-145 (166)
51 4gyw_A UDP-N-acetylglucosamine 97.3 0.0027 9.3E-08 68.1 14.9 137 282-431 520-675 (723)
52 3q3e_A HMW1C-like glycosyltran 97.2 0.0053 1.8E-07 63.7 14.7 133 284-432 440-596 (631)
53 2gt1_A Lipopolysaccharide hept 97.2 0.014 4.6E-07 56.1 17.1 127 283-420 177-321 (326)
54 2bfw_A GLGA glycogen synthase; 96.7 0.019 6.7E-07 50.3 12.9 69 346-420 96-179 (200)
55 3rhz_A GTF3, nucleotide sugar 96.0 0.0078 2.7E-07 58.3 6.0 107 343-459 213-337 (339)
56 3ty2_A 5'-nucleotidase SURE; s 95.1 0.037 1.3E-06 50.7 6.7 119 1-151 4-135 (261)
57 3vue_A GBSS-I, granule-bound s 94.9 0.5 1.7E-05 48.6 15.5 158 287-463 329-512 (536)
58 2phj_A 5'-nucleotidase SURE; S 94.3 0.21 7.2E-06 45.6 9.5 114 9-151 1-127 (251)
59 2x0d_A WSAF; GT4 family, trans 93.4 0.2 6.8E-06 49.7 8.4 82 343-430 293-385 (413)
60 3vue_A GBSS-I, granule-bound s 91.0 0.13 4.3E-06 53.1 3.6 46 1-46 1-52 (536)
61 2wqk_A 5'-nucleotidase SURE; S 90.5 1.9 6.5E-05 39.4 10.6 114 9-151 1-127 (251)
62 2e6c_A 5'-nucleotidase SURE; S 89.0 3.1 0.00011 37.7 10.7 112 10-151 1-129 (244)
63 1g5t_A COB(I)alamin adenosyltr 88.4 4 0.00014 35.6 10.7 97 9-132 28-130 (196)
64 1uqt_A Alpha, alpha-trehalose- 88.3 1.9 6.6E-05 43.5 9.9 107 347-462 333-454 (482)
65 1l5x_A SurviVal protein E; str 88.3 2.9 9.8E-05 38.8 10.1 113 10-151 1-127 (280)
66 1j9j_A Stationary phase surviV 87.3 3.1 0.00011 37.8 9.6 114 10-151 1-128 (247)
67 2x0d_A WSAF; GT4 family, trans 86.0 0.34 1.1E-05 48.1 2.7 41 7-47 44-89 (413)
68 1mvl_A PPC decarboxylase athal 84.1 1.2 4E-05 39.5 4.9 51 1-53 11-61 (209)
69 3t5t_A Putative glycosyltransf 84.0 2.9 0.0001 42.2 8.5 110 346-463 353-474 (496)
70 3zqu_A Probable aromatic acid 82.4 1.7 5.9E-05 38.4 5.4 45 8-53 3-47 (209)
71 3auf_A Glycinamide ribonucleot 79.2 19 0.00065 32.1 11.2 108 5-149 18-129 (229)
72 2v4n_A Multifunctional protein 78.7 8 0.00027 35.2 8.6 111 10-151 2-126 (254)
73 2ejb_A Probable aromatic acid 78.7 3.1 0.00011 36.1 5.7 44 9-53 1-44 (189)
74 4dzz_A Plasmid partitioning pr 77.5 11 0.00037 32.4 9.2 39 10-48 1-41 (206)
75 3iqw_A Tail-anchored protein t 76.8 9 0.00031 36.5 8.9 43 7-49 13-56 (334)
76 2ywr_A Phosphoribosylglycinami 75.9 18 0.00062 31.9 10.1 35 9-46 1-37 (216)
77 3fgn_A Dethiobiotin synthetase 75.9 13 0.00044 33.8 9.3 38 7-44 23-62 (251)
78 3qjg_A Epidermin biosynthesis 75.3 3.5 0.00012 35.3 4.9 43 10-53 6-48 (175)
79 1sbz_A Probable aromatic acid 74.1 3.5 0.00012 36.0 4.7 43 10-53 1-44 (197)
80 1ccw_A Protein (glutamate muta 73.1 5.1 0.00017 32.7 5.3 44 9-52 3-46 (137)
81 3igf_A ALL4481 protein; two-do 73.0 7.9 0.00027 37.5 7.4 37 9-45 1-38 (374)
82 3av3_A Phosphoribosylglycinami 71.8 35 0.0012 29.9 10.9 35 9-46 3-39 (212)
83 3lqk_A Dipicolinate synthase s 70.4 4.5 0.00015 35.5 4.6 45 8-53 6-51 (201)
84 4b4k_A N5-carboxyaminoimidazol 68.7 22 0.00075 30.2 8.2 38 284-323 22-59 (181)
85 1y80_A Predicted cobalamin bin 68.3 7.9 0.00027 34.0 5.8 45 8-52 87-131 (210)
86 1kjn_A MTH0777; hypotethical p 68.3 6.8 0.00023 32.2 4.8 44 10-53 7-52 (157)
87 2yxb_A Coenzyme B12-dependent 67.2 6 0.0002 33.3 4.6 43 8-50 17-59 (161)
88 3eag_A UDP-N-acetylmuramate:L- 66.5 5.9 0.0002 37.5 4.9 36 7-46 2-37 (326)
89 3dfz_A SIRC, precorrin-2 dehyd 66.5 35 0.0012 30.2 9.7 137 283-441 31-186 (223)
90 2vqe_B 30S ribosomal protein S 66.5 19 0.00066 32.6 8.0 34 121-154 157-192 (256)
91 2qyt_A 2-dehydropantoate 2-red 66.1 3.6 0.00012 38.6 3.3 46 3-53 2-53 (317)
92 3nb0_A Glycogen [starch] synth 65.9 15 0.00052 38.5 8.1 46 345-392 490-551 (725)
93 3l6d_A Putative oxidoreductase 65.5 3.7 0.00013 38.6 3.2 41 1-46 1-41 (306)
94 4grd_A N5-CAIR mutase, phospho 65.4 18 0.00061 30.5 6.9 38 284-323 12-49 (173)
95 1g63_A Epidermin modifying enz 65.3 5.6 0.00019 34.2 4.0 44 9-53 2-45 (181)
96 1p3y_1 MRSD protein; flavoprot 63.3 4.6 0.00016 35.2 3.1 44 9-53 8-51 (194)
97 4eg0_A D-alanine--D-alanine li 62.7 9 0.00031 35.9 5.4 48 1-48 5-56 (317)
98 3mc3_A DSRE/DSRF-like family p 62.7 14 0.00047 29.8 5.8 45 9-53 15-62 (134)
99 3mcu_A Dipicolinate synthase, 62.6 7.5 0.00026 34.2 4.4 44 8-52 4-48 (207)
100 3io3_A DEHA2D07832P; chaperone 62.0 17 0.00057 34.8 7.2 40 8-47 16-58 (348)
101 4dim_A Phosphoribosylglycinami 61.1 38 0.0013 32.6 9.9 36 7-47 5-40 (403)
102 1xmp_A PURE, phosphoribosylami 59.4 42 0.0014 28.2 8.2 36 284-321 11-46 (170)
103 3ezx_A MMCP 1, monomethylamine 59.4 13 0.00046 32.8 5.6 46 7-52 90-135 (215)
104 3vot_A L-amino acid ligase, BL 59.3 66 0.0022 31.2 11.3 38 5-47 1-38 (425)
105 3lp6_A Phosphoribosylaminoimid 59.2 80 0.0028 26.6 10.2 36 285-322 8-43 (174)
106 3hn2_A 2-dehydropantoate 2-red 59.2 12 0.00041 35.0 5.6 38 10-53 3-40 (312)
107 2i2x_B MTAC, methyltransferase 58.9 13 0.00043 33.9 5.5 45 7-51 121-165 (258)
108 3rfo_A Methionyl-tRNA formyltr 58.9 10 0.00035 35.8 4.9 37 6-47 1-37 (317)
109 1pzg_A LDH, lactate dehydrogen 58.1 6 0.00021 37.6 3.2 42 1-47 1-43 (331)
110 3trh_A Phosphoribosylaminoimid 57.5 49 0.0017 27.8 8.3 35 285-321 7-41 (169)
111 1qzu_A Hypothetical protein MD 56.9 8.6 0.00029 33.8 3.8 46 7-53 17-63 (206)
112 3zzm_A Bifunctional purine bio 56.9 29 0.00098 34.7 7.8 50 1-58 1-50 (523)
113 3s2u_A UDP-N-acetylglucosamine 56.8 13 0.00043 35.7 5.4 37 285-323 4-40 (365)
114 3la6_A Tyrosine-protein kinase 56.6 24 0.0008 32.6 7.0 40 9-48 91-132 (286)
115 2bw0_A 10-FTHFDH, 10-formyltet 55.8 35 0.0012 32.2 8.2 32 9-45 22-53 (329)
116 2r8r_A Sensor protein; KDPD, P 55.5 17 0.00058 32.4 5.5 41 7-47 4-44 (228)
117 3da8_A Probable 5'-phosphoribo 55.3 31 0.0011 30.4 7.2 49 7-58 10-59 (215)
118 3q0i_A Methionyl-tRNA formyltr 55.1 86 0.0029 29.3 10.7 34 8-46 6-39 (318)
119 2iz6_A Molybdenum cofactor car 54.4 83 0.0028 26.6 9.5 73 347-420 91-173 (176)
120 4b4o_A Epimerase family protei 53.6 12 0.00042 34.3 4.6 33 10-46 1-33 (298)
121 3oow_A Phosphoribosylaminoimid 53.5 68 0.0023 26.8 8.4 131 285-444 6-159 (166)
122 3kuu_A Phosphoribosylaminoimid 53.4 46 0.0016 28.1 7.4 36 286-323 14-49 (174)
123 3ghy_A Ketopantoate reductase 53.3 11 0.00037 35.8 4.2 40 9-53 3-42 (335)
124 4dll_A 2-hydroxy-3-oxopropiona 53.2 15 0.00051 34.5 5.1 35 7-46 29-63 (320)
125 3r6d_A NAD-dependent epimerase 52.8 13 0.00046 32.3 4.5 38 7-47 2-40 (221)
126 3i83_A 2-dehydropantoate 2-red 52.6 14 0.00048 34.7 4.8 38 10-53 3-40 (320)
127 2i2c_A Probable inorganic poly 52.4 9.5 0.00032 35.1 3.5 52 362-421 36-93 (272)
128 1fmt_A Methionyl-tRNA FMet for 52.4 74 0.0025 29.7 9.8 34 8-46 2-35 (314)
129 1psw_A ADP-heptose LPS heptosy 52.4 94 0.0032 28.9 10.8 43 10-52 181-228 (348)
130 3tov_A Glycosyl transferase fa 52.3 52 0.0018 31.1 9.0 44 10-53 186-233 (349)
131 3k96_A Glycerol-3-phosphate de 51.7 9.5 0.00032 36.7 3.5 38 5-47 25-62 (356)
132 3ors_A N5-carboxyaminoimidazol 51.1 44 0.0015 27.9 6.9 34 286-321 5-38 (163)
133 3dhn_A NAD-dependent epimerase 50.7 15 0.0005 32.1 4.4 36 8-47 3-38 (227)
134 3llv_A Exopolyphosphatase-rela 50.6 10 0.00034 30.5 3.0 35 8-47 5-39 (141)
135 1yt5_A Inorganic polyphosphate 50.5 9.3 0.00032 34.8 3.1 53 361-421 41-96 (258)
136 3kjh_A CO dehydrogenase/acetyl 50.5 12 0.0004 33.3 3.8 38 10-47 1-38 (254)
137 3kcq_A Phosphoribosylglycinami 50.1 51 0.0017 29.0 7.7 101 7-149 6-110 (215)
138 3l4e_A Uncharacterized peptida 50.0 45 0.0015 29.0 7.4 48 272-319 16-63 (206)
139 2zki_A 199AA long hypothetical 49.1 16 0.00054 31.4 4.3 39 8-47 3-42 (199)
140 1jx7_A Hypothetical protein YC 48.9 26 0.00087 27.0 5.1 45 9-53 1-50 (117)
141 3doj_A AT3G25530, dehydrogenas 48.6 15 0.00051 34.3 4.3 37 5-46 17-53 (310)
142 1id1_A Putative potassium chan 48.5 15 0.00052 30.0 3.9 33 9-46 3-35 (153)
143 3lrx_A Putative hydrogenase; a 48.0 13 0.00045 30.9 3.4 37 9-48 23-59 (158)
144 2ew2_A 2-dehydropantoate 2-red 47.7 13 0.00045 34.4 3.7 34 8-46 2-35 (316)
145 3g0o_A 3-hydroxyisobutyrate de 47.6 11 0.00037 35.1 3.1 35 7-46 5-39 (303)
146 3l7i_A Teichoic acid biosynthe 47.1 20 0.00068 38.0 5.4 110 345-460 598-719 (729)
147 3hwr_A 2-dehydropantoate 2-red 47.1 14 0.00047 34.7 3.8 41 8-53 18-58 (318)
148 1f0y_A HCDH, L-3-hydroxyacyl-C 46.4 13 0.00046 34.4 3.6 37 5-46 11-47 (302)
149 3tqr_A Phosphoribosylglycinami 46.0 91 0.0031 27.3 8.7 107 6-150 2-112 (215)
150 2vrn_A Protease I, DR1199; cys 45.8 45 0.0015 28.2 6.7 46 1-47 1-46 (190)
151 3mjf_A Phosphoribosylamine--gl 45.1 47 0.0016 32.5 7.5 25 9-38 3-27 (431)
152 1gsa_A Glutathione synthetase; 44.6 19 0.00064 33.3 4.3 39 9-47 1-42 (316)
153 2g1u_A Hypothetical protein TM 44.6 28 0.00095 28.4 5.0 36 7-47 17-52 (155)
154 3n7t_A Macrophage binding prot 44.1 44 0.0015 30.1 6.5 39 9-47 9-58 (247)
155 1bg6_A N-(1-D-carboxylethyl)-L 44.1 16 0.00056 34.6 3.9 33 9-46 4-36 (359)
156 2h78_A Hibadh, 3-hydroxyisobut 43.2 19 0.00064 33.4 4.0 34 8-46 2-35 (302)
157 3rg8_A Phosphoribosylaminoimid 42.8 1.3E+02 0.0046 24.9 8.6 18 424-441 132-149 (159)
158 2a5l_A Trp repressor binding p 42.8 29 0.00098 29.6 4.9 40 8-47 4-44 (200)
159 1lss_A TRK system potassium up 42.6 23 0.00078 27.9 4.0 34 9-47 4-37 (140)
160 1v5e_A Pyruvate oxidase; oxido 42.6 96 0.0033 31.7 9.7 26 365-390 70-101 (590)
161 3ic5_A Putative saccharopine d 42.4 21 0.00072 27.1 3.7 35 8-47 4-39 (118)
162 4huj_A Uncharacterized protein 42.3 12 0.00041 33.0 2.4 36 6-46 20-55 (220)
163 2qs7_A Uncharacterized protein 42.1 32 0.0011 28.0 4.9 44 10-53 8-52 (144)
164 1tvm_A PTS system, galactitol- 42.1 44 0.0015 25.9 5.5 40 5-44 17-57 (113)
165 3dfu_A Uncharacterized protein 41.7 18 0.00062 32.3 3.4 35 7-46 4-38 (232)
166 3o1l_A Formyltetrahydrofolate 41.3 2.2E+02 0.0075 26.3 11.9 103 6-149 102-209 (302)
167 3of5_A Dethiobiotin synthetase 41.2 29 0.00098 30.8 4.7 38 7-44 2-40 (228)
168 1e2b_A Enzyme IIB-cellobiose; 40.6 49 0.0017 25.3 5.4 38 8-45 2-39 (106)
169 1ybh_A Acetolactate synthase, 40.5 79 0.0027 32.3 8.7 25 366-390 78-108 (590)
170 3qxc_A Dethiobiotin synthetase 40.4 26 0.0009 31.5 4.4 38 7-44 18-57 (242)
171 2ark_A Flavodoxin; FMN, struct 40.2 29 0.001 29.5 4.5 41 7-47 2-44 (188)
172 1jkx_A GART;, phosphoribosylgl 40.1 1.9E+02 0.0063 25.2 11.4 104 10-150 1-108 (212)
173 3bbn_B Ribosomal protein S2; s 40.0 37 0.0012 30.3 5.1 32 122-153 157-190 (231)
174 3obb_A Probable 3-hydroxyisobu 39.9 29 0.001 32.2 4.8 32 9-45 3-34 (300)
175 3qsg_A NAD-binding phosphogluc 39.7 16 0.00056 34.1 3.0 36 6-46 21-57 (312)
176 3qvo_A NMRA family protein; st 39.6 22 0.00076 31.3 3.8 39 6-47 19-58 (236)
177 1eiw_A Hypothetical protein MT 39.4 37 0.0013 26.4 4.5 59 359-419 36-108 (111)
178 3f6r_A Flavodoxin; FMN binding 39.4 31 0.001 27.8 4.4 39 9-47 1-40 (148)
179 1o4v_A Phosphoribosylaminoimid 39.3 1.8E+02 0.0061 24.7 10.5 35 285-321 14-48 (183)
180 1u0t_A Inorganic polyphosphate 39.1 34 0.0012 31.9 5.1 56 358-421 72-131 (307)
181 1t9b_A Acetolactate synthase, 38.7 86 0.003 32.8 8.7 26 365-390 147-178 (677)
182 1ozh_A ALS, acetolactate synth 38.2 1.2E+02 0.0042 30.7 9.6 25 366-390 76-106 (566)
183 4hb9_A Similarities with proba 37.8 22 0.00076 34.0 3.7 30 10-44 2-31 (412)
184 1ydg_A Trp repressor binding p 37.6 40 0.0014 29.1 5.1 40 8-47 5-45 (211)
185 3p0r_A Azoreductase; structura 37.3 30 0.001 30.1 4.2 39 6-44 1-46 (211)
186 3ius_A Uncharacterized conserv 37.3 19 0.00064 32.8 2.9 36 8-48 4-39 (286)
187 2x4g_A Nucleoside-diphosphate- 37.2 34 0.0012 31.8 4.9 37 7-47 11-47 (342)
188 3afo_A NADH kinase POS5; alpha 36.9 27 0.00091 33.9 4.0 60 354-421 107-171 (388)
189 1cp2_A CP2, nitrogenase iron p 36.8 30 0.001 31.1 4.3 38 9-46 1-38 (269)
190 3q9l_A Septum site-determining 36.7 33 0.0011 30.5 4.5 39 9-47 1-41 (260)
191 2xj4_A MIPZ; replication, cell 36.6 34 0.0012 31.3 4.7 39 9-47 3-43 (286)
192 1evy_A Glycerol-3-phosphate de 36.4 15 0.00053 35.1 2.3 32 10-46 16-47 (366)
193 2jzc_A UDP-N-acetylglucosamine 36.4 2.1E+02 0.007 25.1 9.6 40 10-49 28-74 (224)
194 2rh8_A Anthocyanidin reductase 36.4 34 0.0012 31.8 4.8 41 1-45 1-41 (338)
195 1g3q_A MIND ATPase, cell divis 36.1 37 0.0013 29.7 4.7 39 9-47 1-41 (237)
196 1u11_A PURE (N5-carboxyaminoim 35.9 1.1E+02 0.0038 25.9 7.2 37 285-323 22-58 (182)
197 2r85_A PURP protein PF1517; AT 35.5 34 0.0012 31.8 4.6 35 9-49 2-36 (334)
198 1wcv_1 SOJ, segregation protei 35.3 31 0.001 30.9 4.0 41 8-48 4-46 (257)
199 2fb6_A Conserved hypothetical 35.2 35 0.0012 26.7 3.9 47 5-52 4-54 (117)
200 3l49_A ABC sugar (ribose) tran 35.2 2.4E+02 0.0081 24.9 10.5 40 6-45 2-43 (291)
201 3cky_A 2-hydroxymethyl glutara 34.9 39 0.0013 31.0 4.8 34 8-46 3-36 (301)
202 3ego_A Probable 2-dehydropanto 34.9 27 0.00092 32.5 3.7 39 9-53 2-41 (307)
203 3gpi_A NAD-dependent epimerase 34.8 42 0.0014 30.4 5.0 33 9-46 3-35 (286)
204 1q6z_A BFD, BFDC, benzoylforma 34.7 63 0.0022 32.5 6.7 24 366-389 66-95 (528)
205 1oi4_A Hypothetical protein YH 34.3 85 0.0029 26.7 6.6 42 5-47 19-60 (193)
206 3c24_A Putative oxidoreductase 34.3 35 0.0012 31.2 4.3 33 9-46 11-44 (286)
207 3kkl_A Probable chaperone prot 34.1 65 0.0022 28.8 6.0 39 9-47 3-52 (244)
208 3lk7_A UDP-N-acetylmuramoylala 33.7 74 0.0025 31.3 6.9 34 7-45 7-40 (451)
209 1vpd_A Tartronate semialdehyde 33.7 40 0.0014 30.9 4.6 32 10-46 6-37 (299)
210 3b6i_A Flavoprotein WRBA; flav 33.7 45 0.0015 28.2 4.7 39 9-47 1-41 (198)
211 2q5c_A NTRC family transcripti 33.6 47 0.0016 28.7 4.7 45 107-156 129-173 (196)
212 3ug7_A Arsenical pump-driving 33.3 49 0.0017 31.4 5.3 42 7-48 23-65 (349)
213 3czc_A RMPB; alpha/beta sandwi 33.2 46 0.0016 25.6 4.2 39 6-44 15-55 (110)
214 1ydh_A AT5G11950; structural g 33.2 1.1E+02 0.0036 26.9 7.0 44 347-391 89-143 (216)
215 1u9c_A APC35852; structural ge 33.2 77 0.0026 27.6 6.3 38 10-47 6-52 (224)
216 1ks9_A KPA reductase;, 2-dehyd 32.8 35 0.0012 31.0 4.1 33 10-47 1-33 (291)
217 2l2q_A PTS system, cellobiose- 32.7 50 0.0017 25.3 4.3 35 8-42 3-37 (109)
218 2raf_A Putative dinucleotide-b 32.6 37 0.0013 29.4 4.0 34 8-46 18-51 (209)
219 3pdu_A 3-hydroxyisobutyrate de 32.4 34 0.0012 31.3 4.0 33 9-46 1-33 (287)
220 4gbj_A 6-phosphogluconate dehy 32.4 38 0.0013 31.4 4.2 30 10-44 6-35 (297)
221 3end_A Light-independent proto 32.3 44 0.0015 30.8 4.7 40 8-47 40-79 (307)
222 2an1_A Putative kinase; struct 32.3 40 0.0014 31.0 4.4 38 7-44 3-41 (292)
223 3eya_A Pyruvate dehydrogenase 32.3 91 0.0031 31.6 7.4 25 366-390 69-99 (549)
224 3bul_A Methionine synthase; tr 32.2 54 0.0018 33.6 5.6 45 8-52 97-141 (579)
225 2hy5_B Intracellular sulfur ox 32.2 82 0.0028 25.3 5.7 45 9-53 5-52 (136)
226 2hy5_A Putative sulfurtransfer 31.9 82 0.0028 24.8 5.7 44 10-53 1-48 (130)
227 2vo1_A CTP synthase 1; pyrimid 31.8 47 0.0016 30.3 4.4 44 8-51 21-67 (295)
228 2bln_A Protein YFBG; transfera 31.6 1.3E+02 0.0046 27.8 7.9 33 10-47 1-33 (305)
229 3s40_A Diacylglycerol kinase; 31.5 93 0.0032 28.7 6.8 81 286-392 12-98 (304)
230 2afh_E Nitrogenase iron protei 31.5 42 0.0014 30.6 4.4 38 9-46 2-39 (289)
231 3fwz_A Inner membrane protein 31.2 31 0.0011 27.6 3.0 35 9-48 7-41 (140)
232 3rpe_A MDAB, modulator of drug 31.0 48 0.0016 29.2 4.4 41 5-45 21-68 (218)
233 1yb4_A Tartronic semialdehyde 31.0 34 0.0011 31.3 3.6 32 8-44 2-33 (295)
234 1hyq_A MIND, cell division inh 30.9 47 0.0016 29.7 4.5 38 10-47 2-41 (263)
235 2xw6_A MGS, methylglyoxal synt 30.9 1.3E+02 0.0043 24.2 6.5 100 8-152 2-114 (134)
236 2hmt_A YUAA protein; RCK, KTN, 30.9 28 0.00096 27.5 2.7 33 9-46 6-38 (144)
237 4ds3_A Phosphoribosylglycinami 30.7 2.5E+02 0.0085 24.3 9.0 110 6-152 4-117 (209)
238 1rw7_A YDR533CP; alpha-beta sa 30.7 90 0.0031 27.7 6.4 39 9-47 3-52 (243)
239 4dgk_A Phytoene dehydrogenase; 30.4 23 0.00078 35.3 2.5 32 9-45 1-32 (501)
240 1efp_B ETF, protein (electron 30.3 3E+02 0.01 24.6 10.5 30 122-151 113-148 (252)
241 2a33_A Hypothetical protein; s 30.2 72 0.0025 28.0 5.4 48 5-52 9-61 (215)
242 3qha_A Putative oxidoreductase 29.9 28 0.00097 32.1 2.9 33 9-46 15-47 (296)
243 3ew7_A LMO0794 protein; Q8Y8U8 29.7 54 0.0018 28.0 4.6 34 10-47 1-34 (221)
244 4e12_A Diketoreductase; oxidor 29.7 46 0.0016 30.4 4.3 34 8-46 3-36 (283)
245 1p9o_A Phosphopantothenoylcyst 29.6 33 0.0011 32.2 3.2 24 25-48 67-90 (313)
246 1z82_A Glycerol-3-phosphate de 29.6 39 0.0013 31.7 3.9 34 8-46 13-46 (335)
247 3zq6_A Putative arsenical pump 29.5 54 0.0019 30.6 4.8 38 10-47 14-52 (324)
248 3h2s_A Putative NADH-flavin re 29.3 55 0.0019 28.1 4.6 34 10-47 1-34 (224)
249 2c5a_A GDP-mannose-3', 5'-epim 29.0 72 0.0025 30.3 5.8 38 6-47 26-63 (379)
250 3gl9_A Response regulator; bet 28.9 73 0.0025 24.1 4.9 33 121-153 45-86 (122)
251 4ezb_A Uncharacterized conserv 28.8 42 0.0014 31.4 3.9 34 8-46 23-57 (317)
252 2w36_A Endonuclease V; hypoxan 28.7 73 0.0025 28.2 5.1 36 112-150 96-138 (225)
253 3l4b_C TRKA K+ channel protien 28.6 23 0.00077 30.9 1.9 33 10-47 1-33 (218)
254 2a33_A Hypothetical protein; s 28.5 2.7E+02 0.0094 24.2 8.9 45 347-391 93-147 (215)
255 3ot1_A 4-methyl-5(B-hydroxyeth 28.5 96 0.0033 26.7 6.0 39 8-47 8-46 (208)
256 2gk4_A Conserved hypothetical 28.4 40 0.0014 30.0 3.4 22 26-47 32-53 (232)
257 2lpm_A Two-component response 28.4 39 0.0013 26.7 3.0 30 121-150 52-86 (123)
258 2r6j_A Eugenol synthase 1; phe 28.3 58 0.002 29.9 4.8 34 10-47 12-45 (318)
259 3g79_A NDP-N-acetyl-D-galactos 28.2 59 0.002 32.4 5.0 37 7-48 16-54 (478)
260 4g65_A TRK system potassium up 28.1 18 0.00062 36.0 1.2 33 10-47 4-36 (461)
261 3qvl_A Putative hydantoin race 28.0 2.5E+02 0.0084 24.9 8.8 37 10-46 2-39 (245)
262 2vns_A Metalloreductase steap3 27.9 41 0.0014 29.3 3.5 34 8-46 27-60 (215)
263 4hcj_A THIJ/PFPI domain protei 27.9 57 0.0019 27.6 4.2 42 5-47 4-45 (177)
264 1qyd_A Pinoresinol-lariciresin 27.9 55 0.0019 29.9 4.6 35 9-47 4-38 (313)
265 3c1o_A Eugenol synthase; pheny 27.9 54 0.0018 30.2 4.5 36 8-47 3-38 (321)
266 1lld_A L-lactate dehydrogenase 27.8 34 0.0012 31.8 3.1 37 6-47 4-42 (319)
267 2an1_A Putative kinase; struct 27.7 30 0.001 31.9 2.6 56 358-421 60-119 (292)
268 1u0t_A Inorganic polyphosphate 27.5 54 0.0018 30.5 4.3 37 9-45 4-41 (307)
269 2qv7_A Diacylglycerol kinase D 27.4 90 0.0031 29.3 6.0 81 287-392 29-115 (337)
270 2ph1_A Nucleotide-binding prot 27.4 58 0.002 29.2 4.5 41 9-49 17-59 (262)
271 4e08_A DJ-1 beta; flavodoxin-l 27.3 1.2E+02 0.004 25.6 6.3 40 7-47 3-42 (190)
272 1qgu_B Protein (nitrogenase mo 27.0 2.2E+02 0.0076 28.5 9.1 33 10-47 361-393 (519)
273 2c20_A UDP-glucose 4-epimerase 27.0 59 0.002 30.0 4.6 34 9-46 1-34 (330)
274 3goc_A Endonuclease V; alpha-b 27.0 66 0.0023 28.6 4.5 36 112-150 100-142 (237)
275 1xjc_A MOBB protein homolog; s 26.9 90 0.0031 26.1 5.3 41 7-47 2-42 (169)
276 3g17_A Similar to 2-dehydropan 26.7 20 0.00069 33.1 1.2 33 9-46 2-34 (294)
277 2bon_A Lipid kinase; DAG kinas 26.5 1.4E+02 0.0048 27.8 7.2 81 283-391 30-118 (332)
278 1iow_A DD-ligase, DDLB, D-ALA\ 26.3 82 0.0028 28.6 5.5 39 9-47 2-44 (306)
279 3nbm_A PTS system, lactose-spe 26.2 59 0.002 25.0 3.6 38 7-44 4-41 (108)
280 3lyu_A Putative hydrogenase; t 26.1 46 0.0016 26.9 3.2 36 9-47 18-53 (142)
281 1kjq_A GART 2, phosphoribosylg 26.0 65 0.0022 30.7 4.8 37 6-47 8-44 (391)
282 1rpn_A GDP-mannose 4,6-dehydra 26.0 63 0.0021 29.8 4.6 39 5-47 10-48 (335)
283 4e21_A 6-phosphogluconate dehy 25.9 50 0.0017 31.5 3.9 34 8-46 21-54 (358)
284 2c5m_A CTP synthase; cytidine 25.9 46 0.0016 30.2 3.2 41 9-49 22-65 (294)
285 3u7q_B Nitrogenase molybdenum- 25.9 3.6E+02 0.012 27.0 10.5 32 10-46 365-396 (523)
286 1ydh_A AT5G11950; structural g 25.8 98 0.0033 27.1 5.5 47 6-52 6-57 (216)
287 2o3j_A UDP-glucose 6-dehydroge 25.8 64 0.0022 32.2 4.8 40 1-45 1-42 (481)
288 2ab0_A YAJL; DJ-1/THIJ superfa 25.7 1.2E+02 0.0042 25.9 6.1 39 9-48 2-40 (205)
289 3cg0_A Response regulator rece 25.6 95 0.0033 23.8 5.1 38 1-42 1-38 (140)
290 3sty_A Methylketone synthase 1 25.4 58 0.002 28.3 4.1 37 10-46 12-48 (267)
291 2ahr_A Putative pyrroline carb 25.3 51 0.0018 29.4 3.7 34 8-46 2-35 (259)
292 2d1p_B TUSC, hypothetical UPF0 25.2 86 0.0029 24.3 4.6 44 10-53 2-48 (119)
293 3i4f_A 3-oxoacyl-[acyl-carrier 25.2 73 0.0025 28.3 4.8 36 9-47 6-41 (264)
294 3ujp_A Mn transporter subunit; 25.1 4E+02 0.014 24.5 12.3 16 425-440 159-174 (307)
295 3f2v_A General stress protein 25.1 41 0.0014 29.0 2.8 36 9-44 1-37 (192)
296 4e5v_A Putative THUA-like prot 24.9 78 0.0027 29.0 4.9 39 7-46 2-43 (281)
297 4e5s_A MCCFLIKE protein (BA_56 24.8 99 0.0034 29.1 5.7 26 298-323 63-88 (331)
298 2q3e_A UDP-glucose 6-dehydroge 24.6 63 0.0021 32.1 4.5 34 8-46 4-39 (467)
299 3dqp_A Oxidoreductase YLBE; al 24.5 66 0.0023 27.6 4.2 34 10-47 1-34 (219)
300 3k9g_A PF-32 protein; ssgcid, 24.5 67 0.0023 28.7 4.3 41 7-48 24-66 (267)
301 2z04_A Phosphoribosylaminoimid 24.5 79 0.0027 29.8 5.1 35 9-48 1-35 (365)
302 4f3r_A Phosphopantetheine aden 24.4 79 0.0027 26.3 4.4 35 7-45 2-40 (162)
303 3m1a_A Putative dehydrogenase; 24.4 76 0.0026 28.6 4.8 35 10-47 5-39 (281)
304 4g6h_A Rotenone-insensitive NA 24.4 46 0.0016 33.4 3.5 35 8-47 41-75 (502)
305 1meo_A Phosophoribosylglycinam 24.4 3.4E+02 0.012 23.4 10.3 35 10-47 1-37 (209)
306 4b4k_A N5-carboxyaminoimidazol 24.3 3E+02 0.01 23.2 7.8 115 295-443 59-175 (181)
307 1vhq_A Enhancing lycopene bios 24.2 1.4E+02 0.0047 26.2 6.3 38 9-47 6-48 (232)
308 4gwg_A 6-phosphogluconate dehy 24.2 43 0.0015 33.5 3.1 35 7-46 2-36 (484)
309 2gas_A Isoflavone reductase; N 24.2 58 0.002 29.6 3.9 35 9-47 2-36 (307)
310 3oh8_A Nucleoside-diphosphate 24.1 73 0.0025 31.9 4.9 36 8-47 146-181 (516)
311 3ax6_A Phosphoribosylaminoimid 24.1 1E+02 0.0035 29.2 5.8 34 9-47 1-34 (380)
312 1t5b_A Acyl carrier protein ph 24.0 71 0.0024 27.0 4.3 37 9-45 1-43 (201)
313 3to5_A CHEY homolog; alpha(5)b 24.0 75 0.0026 25.3 4.1 33 121-153 56-97 (134)
314 2pk3_A GDP-6-deoxy-D-LYXO-4-he 24.0 73 0.0025 29.2 4.6 38 5-46 8-45 (321)
315 3i6i_A Putative leucoanthocyan 23.8 58 0.002 30.4 3.9 35 9-47 10-44 (346)
316 2h31_A Multifunctional protein 23.8 3.6E+02 0.012 26.2 9.5 36 284-321 265-300 (425)
317 2yvq_A Carbamoyl-phosphate syn 23.8 1E+02 0.0035 24.9 4.9 97 13-149 27-131 (143)
318 3fse_A Two-domain protein cont 23.7 1.3E+02 0.0043 28.8 6.2 46 1-47 2-47 (365)
319 3dtt_A NADP oxidoreductase; st 23.7 68 0.0023 28.5 4.2 36 7-47 17-52 (245)
320 3p9x_A Phosphoribosylglycinami 23.6 3.6E+02 0.012 23.3 9.6 36 9-47 2-39 (211)
321 2pju_A Propionate catabolism o 23.6 69 0.0024 28.3 4.1 40 107-151 141-180 (225)
322 3vps_A TUNA, NAD-dependent epi 23.5 53 0.0018 30.0 3.5 36 8-47 6-41 (321)
323 1xrs_B D-lysine 5,6-aminomutas 23.4 47 0.0016 30.2 3.0 45 8-52 119-172 (262)
324 1orr_A CDP-tyvelose-2-epimeras 23.3 75 0.0026 29.4 4.6 33 9-45 1-33 (347)
325 3ih5_A Electron transfer flavo 23.3 3.4E+02 0.012 23.5 8.6 112 9-151 3-123 (217)
326 1d4a_A DT-diaphorase, quinone 23.3 1.2E+02 0.004 27.5 5.8 38 9-46 2-42 (273)
327 2iht_A Carboxyethylarginine sy 23.2 2.8E+02 0.0095 28.0 9.2 76 301-390 14-106 (573)
328 1i24_A Sulfolipid biosynthesis 23.1 74 0.0025 30.3 4.6 37 5-45 7-43 (404)
329 3pef_A 6-phosphogluconate dehy 23.1 76 0.0026 28.8 4.5 32 10-46 2-33 (287)
330 3ea0_A ATPase, para family; al 23.0 70 0.0024 28.0 4.1 40 9-48 3-45 (245)
331 3lq1_A 2-succinyl-5-enolpyruvy 23.0 2E+02 0.0068 29.2 8.0 26 365-390 76-107 (578)
332 1jay_A Coenzyme F420H2:NADP+ o 22.9 73 0.0025 27.3 4.1 32 10-46 1-33 (212)
333 3g1w_A Sugar ABC transporter; 22.9 4E+02 0.014 23.6 10.0 85 1-149 1-92 (305)
334 3t6k_A Response regulator rece 22.9 1.1E+02 0.0037 23.7 4.9 33 121-153 47-88 (136)
335 1pjq_A CYSG, siroheme synthase 22.8 4.3E+02 0.015 25.8 10.3 84 283-386 12-100 (457)
336 3u7i_A FMN-dependent NADH-azor 22.8 73 0.0025 28.0 4.1 39 6-44 1-48 (223)
337 3l18_A Intracellular protease 22.8 1.8E+02 0.0063 23.6 6.5 38 9-47 2-39 (168)
338 2bcg_G Secretory pathway GDP d 22.7 51 0.0017 32.5 3.4 42 1-47 3-44 (453)
339 1txg_A Glycerol-3-phosphate de 22.7 49 0.0017 30.8 3.1 31 10-45 1-31 (335)
340 3n0v_A Formyltetrahydrofolate 22.6 4.4E+02 0.015 24.0 11.6 104 6-150 87-195 (286)
341 3f67_A Putative dienelactone h 22.6 1.1E+02 0.0039 25.8 5.5 36 10-45 32-67 (241)
342 3gg2_A Sugar dehydrogenase, UD 22.6 61 0.0021 32.0 3.9 33 10-47 3-35 (450)
343 3alj_A 2-methyl-3-hydroxypyrid 22.4 62 0.0021 30.7 3.9 32 9-45 11-42 (379)
344 3obi_A Formyltetrahydrofolate 22.4 4.4E+02 0.015 24.0 10.5 104 6-150 86-195 (288)
345 2cvz_A Dehydrogenase, 3-hydrox 22.4 68 0.0023 29.0 4.0 32 9-46 1-32 (289)
346 2hna_A Protein MIOC, flavodoxi 22.3 99 0.0034 24.7 4.6 36 9-44 1-37 (147)
347 1qkk_A DCTD, C4-dicarboxylate 22.3 2.1E+02 0.0071 22.4 6.7 39 382-420 74-120 (155)
348 2iz1_A 6-phosphogluconate dehy 22.2 51 0.0017 32.8 3.2 33 9-46 5-37 (474)
349 3sbx_A Putative uncharacterize 22.2 94 0.0032 26.6 4.5 45 8-52 12-60 (189)
350 2pan_A Glyoxylate carboligase; 22.2 2.5E+02 0.0086 28.7 8.7 27 364-390 92-124 (616)
351 3bfv_A CAPA1, CAPB2, membrane 22.2 91 0.0031 28.2 4.8 41 8-48 80-122 (271)
352 2pn1_A Carbamoylphosphate synt 22.0 96 0.0033 28.6 5.1 34 8-47 3-38 (331)
353 3pnx_A Putative sulfurtransfer 22.0 1.6E+02 0.0055 24.4 5.8 43 11-53 7-49 (160)
354 4gi5_A Quinone reductase; prot 21.9 1.3E+02 0.0044 27.6 5.6 37 7-43 20-59 (280)
355 3rht_A (gatase1)-like protein; 21.8 49 0.0017 30.0 2.8 39 7-49 2-42 (259)
356 1mio_B Nitrogenase molybdenum 21.7 2.6E+02 0.0088 27.4 8.3 26 121-149 384-409 (458)
357 2q5c_A NTRC family transcripti 21.6 70 0.0024 27.5 3.7 30 361-393 51-80 (196)
358 2x7j_A 2-succinyl-5-enolpyruvy 21.6 1.4E+02 0.0049 30.5 6.6 26 365-390 96-127 (604)
359 4hv4_A UDP-N-acetylmuramate--L 21.6 96 0.0033 31.0 5.2 34 7-44 20-53 (494)
360 1qyc_A Phenylcoumaran benzylic 21.6 80 0.0027 28.7 4.3 35 9-47 4-38 (308)
361 1ehi_A LMDDL2, D-alanine:D-lac 21.6 79 0.0027 30.2 4.4 38 9-46 3-45 (377)
362 2dzd_A Pyruvate carboxylase; b 21.6 64 0.0022 31.8 3.8 34 9-47 6-39 (461)
363 3f6p_A Transcriptional regulat 21.6 1.2E+02 0.0043 22.6 4.9 33 121-153 45-83 (120)
364 3f5d_A Protein YDEA; unknow pr 21.5 75 0.0026 27.5 3.9 39 9-48 3-42 (206)
365 2wvg_A PDC, pyruvate decarboxy 21.5 2E+02 0.0067 29.1 7.6 26 365-390 67-98 (568)
366 3c7a_A Octopine dehydrogenase; 21.4 36 0.0012 33.0 1.9 31 9-44 2-33 (404)
367 2qh8_A Uncharacterized protein 21.4 3.8E+02 0.013 24.0 9.1 30 121-150 68-97 (302)
368 3oti_A CALG3; calicheamicin, T 21.4 4.2E+02 0.014 24.7 9.8 90 10-149 232-325 (398)
369 1xvl_A Mn transporter, MNTC pr 21.4 4.9E+02 0.017 24.0 10.6 30 409-440 158-188 (321)
370 2pju_A Propionate catabolism o 21.3 85 0.0029 27.7 4.2 29 362-393 64-92 (225)
371 1c0p_A D-amino acid oxidase; a 21.2 82 0.0028 29.5 4.4 35 8-47 5-39 (363)
372 1y1p_A ARII, aldehyde reductas 21.1 1.3E+02 0.0043 27.7 5.7 37 7-47 9-45 (342)
373 3ga2_A Endonuclease V; alpha-b 21.1 81 0.0028 28.3 3.9 36 112-150 102-144 (246)
374 1sqs_A Conserved hypothetical 20.9 88 0.003 27.6 4.3 36 9-44 1-40 (242)
375 1i36_A Conserved hypothetical 20.9 59 0.002 29.0 3.2 30 10-44 1-30 (264)
376 1t1j_A Hypothetical protein; s 20.8 1.1E+02 0.0039 24.1 4.4 34 8-41 6-47 (125)
377 3enk_A UDP-glucose 4-epimerase 20.7 99 0.0034 28.5 4.9 33 9-45 5-37 (341)
378 3slg_A PBGP3 protein; structur 20.7 78 0.0027 29.8 4.2 36 8-47 23-59 (372)
379 2q28_A Oxalyl-COA decarboxylas 20.6 3.2E+02 0.011 27.5 9.0 28 361-390 70-103 (564)
380 2dpo_A L-gulonate 3-dehydrogen 20.4 66 0.0023 30.1 3.4 35 8-47 5-39 (319)
381 2hpv_A FMN-dependent NADH-azor 20.4 87 0.003 26.7 4.1 37 9-45 1-44 (208)
382 1y56_B Sarcosine oxidase; dehy 20.3 58 0.002 30.8 3.2 34 9-47 5-38 (382)
383 3gi1_A LBP, laminin-binding pr 20.3 3.4E+02 0.011 24.6 8.3 39 110-150 218-258 (286)
384 2b69_A UDP-glucuronate decarbo 20.2 1E+02 0.0034 28.6 4.8 36 7-46 25-60 (343)
385 3m6m_D Sensory/regulatory prot 20.1 98 0.0034 24.2 4.1 32 121-152 57-99 (143)
386 3s40_A Diacylglycerol kinase; 20.1 1.4E+02 0.0049 27.4 5.7 42 7-48 6-50 (304)
387 2fex_A Conserved hypothetical 20.1 1.1E+02 0.0037 25.7 4.6 38 9-47 1-39 (188)
388 2ehd_A Oxidoreductase, oxidore 20.1 96 0.0033 26.8 4.4 35 10-47 5-39 (234)
389 3r5x_A D-alanine--D-alanine li 20.1 74 0.0025 29.1 3.8 45 9-53 3-51 (307)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=7.5e-65 Score=517.13 Aligned_cols=427 Identities=26% Similarity=0.462 Sum_probs=346.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCCC
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSG--FTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLP 85 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 85 (478)
++.||+++|+|++||++|++.||+.|+++| +.|||++++.+...+. .. .. ...++|+|..+|++++
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~---~~--------~~-~~~~~i~~~~ipdglp 79 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLF---SR--------SN-EFLPNIKYYNVHDGLP 79 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSC---SS--------SS-CCCTTEEEEECCCCCC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhh---cc--------cc-cCCCCceEEecCCCCC
Confidence 358999999999999999999999999999 9999999987666654 22 00 1124799999999988
Q ss_pred CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhh-ccCCCccEEEEcCCchhhHHHHHHcCCccEEEecchhHHHHHHHhhh
Q 011724 86 LNFDRSLNHDQFMECLLHVFSAHVDELVGNLI-QLNPEMNCLVTDTFFVWSSMIAKKYNLVNISFWTEPALVLTLYYHMD 164 (478)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~-~~~~~pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 164 (478)
++.+...+....+..+...+...+++.++.+. +.+.++|+||+|.++.|+..+|+++|||++.++++.++.+..+++.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~ 159 (454)
T 3hbf_A 80 KGYVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTD 159 (454)
T ss_dssp TTCCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHH
T ss_pred CCccccCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhH
Confidence 76554433333444444444444555555432 22357999999999999999999999999999999999988888776
Q ss_pred hhhhcCCCCCCCCCCCccccCCCCCCCCccccchhhhhcCCchHHHHHHHHHhhhhccccEEEecChhhhcHHHHHHHHh
Q 011724 165 LLRSHGHFASTDNREDTIDYIPGVRAIERKDLMSYLQATDTSTVVHRIIQKAFEDVKRVDFILCNTVHELESETISALHQ 244 (478)
Q Consensus 165 ~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~~~ 244 (478)
.+......... ..+..+.++||++....++++..+.. .......+.+.+..+...+++.+++||+++||++.++++++
T Consensus 160 ~~~~~~~~~~~-~~~~~~~~iPg~p~~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~ 237 (454)
T 3hbf_A 160 LIREKTGSKEV-HDVKSIDVLPGFPELKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNS 237 (454)
T ss_dssp HHHHTCCHHHH-TTSSCBCCSTTSCCBCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHT
T ss_pred HHHhhcCCCcc-ccccccccCCCCCCcChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHh
Confidence 55543211100 11234456899988888888876553 33445666666777778899999999999999999999998
Q ss_pred cCC-ccccccCCCCCCCCCCCCCCCCChhhHhHhhcCCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEECCC
Q 011724 245 KQP-TYAIGPIFPAGFTKSLVPTSLWSESECTQWLNTKPRGSVLYVSFGSYAHASKNDIVEIALGLLLSEVSFVWVLRPD 323 (478)
Q Consensus 245 ~~p-~~~vGp~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 323 (478)
..| +++|||++...... ...+++++.+||+.++++++|||||||......+.+.+++.+|++.+++|||+++..
T Consensus 238 ~~~~v~~vGPl~~~~~~~-----~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~ 312 (454)
T 3hbf_A 238 KFKLLLNVGPFNLTTPQR-----KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGD 312 (454)
T ss_dssp TSSCEEECCCHHHHSCCS-----CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSC
T ss_pred cCCCEEEECCcccccccc-----cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc
Confidence 888 99999998643211 111257899999998889999999999998889999999999999999999999865
Q ss_pred CCCCCccCCCChhhhhhhccCCCeEEeeccChHhhhhccCcceeeeccCchhhHHHHhcCcceeccCcccchhHHHHHhh
Q 011724 324 IVSSDETDFLPVGFEEKIKISGRGLIVPWCSQIDVISHSAIGGFLTHCGWNSIQESIWCSVPLLCFPLLTDQFTNRKLVK 403 (478)
Q Consensus 324 ~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~~vL~~~~v~~~ItHGG~~s~~Eal~~GvP~l~~P~~~DQ~~na~rv~ 403 (478)
..+.+|++|.++ .++|+++++|+||.+||+|+++++||||||+||++||+++|||||++|+++||+.||++++
T Consensus 313 -----~~~~lp~~~~~~--~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~ 385 (454)
T 3hbf_A 313 -----PKEKLPKGFLER--TKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTE 385 (454)
T ss_dssp -----HHHHSCTTHHHH--TTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH
T ss_pred -----chhcCCHhHHhh--cCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHH
Confidence 334578888877 8899999999999999999999999999999999999999999999999999999999998
Q ss_pred c-----------ccCHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 011724 404 S-----------SITKEEVSEKINRLMSGKSSDELRKNIKEVRKKLENALSADGSSQKNFNQFINDVQ 460 (478)
Q Consensus 404 ~-----------~~t~~~l~~~v~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~i~~~~ 460 (478)
+ .+++++|.++|+++|++++.++||+||+++++++++|+++||||+..+++|++++.
T Consensus 386 ~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 386 SVLEIGVGVDNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp TTSCSEEECGGGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred HhhCeeEEecCCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 7 58999999999999983223489999999999999999999999999999999874
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=2.1e-61 Score=500.49 Aligned_cols=447 Identities=34% Similarity=0.620 Sum_probs=335.2
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEc
Q 011724 1 MENNHKKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATV 80 (478)
Q Consensus 1 ~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (478)
|.+.. ++++||+++|+|+.||++|++.||++|++|||+|||++++.+...+.+.... ......++++|+.+
T Consensus 1 ~~~~~-~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~--------~~~~~~~~i~~~~l 71 (482)
T 2pq6_A 1 MGNFA-NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGP--------KAFDGFTDFNFESI 71 (482)
T ss_dssp --------CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC--------------------CEEEEEE
T ss_pred CCccc-CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhcccccc--------ccccCCCceEEEEC
Confidence 55552 3357999999999999999999999999999999999999887776511000 00000137999999
Q ss_pred CCCCCCC---CCCCCCHHHHHHHHHHHhhHHHHHHHHHhhcc--CCCccEEEEcCCchhhHHHHHHcCCccEEEecchhH
Q 011724 81 SDGLPLN---FDRSLNHDQFMECLLHVFSAHVDELVGNLIQL--NPEMNCLVTDTFFVWSSMIAKKYNLVNISFWTEPAL 155 (478)
Q Consensus 81 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~--~~~pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 155 (478)
++++++. .....+...++..+...+...++++++.++.. +.++|+||+|.++.|+..+|+++|||++.++++.+.
T Consensus 72 ~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~ 151 (482)
T 2pq6_A 72 PDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSAC 151 (482)
T ss_dssp CCCCC---------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHH
T ss_pred CCCCCCcccccCcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHH
Confidence 9876652 11223455555555466778888998887632 257999999999999999999999999999999887
Q ss_pred HHHHHHhhhhhhhcCCCCCCCCC-------CCccccCCCCCCCCccccchhhhhcCCchHHHHHHHHHhhhhccccEEEe
Q 011724 156 VLTLYYHMDLLRSHGHFASTDNR-------EDTIDYIPGVRAIERKDLMSYLQATDTSTVVHRIIQKAFEDVKRVDFILC 228 (478)
Q Consensus 156 ~~~~~~~~~~~~~~~~~p~~~~~-------~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 228 (478)
.+....+++.+...+..|..... .....++|+++.....+++.+...........+.+....+...+++.+++
T Consensus 152 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ 231 (482)
T 2pq6_A 152 SLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILL 231 (482)
T ss_dssp HHHHHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEE
T ss_pred HHHHHHHHHHHHhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEE
Confidence 76665555554445555543211 12233467766555555555443322233444444445566678899999
Q ss_pred cChhhhcHHHHHHHHhcCC-ccccccCCCC-CCCC---C--CCCCCCC-ChhhHhHhhcCCCCCceEEEEecccccCCHH
Q 011724 229 NTVHELESETISALHQKQP-TYAIGPIFPA-GFTK---S--LVPTSLW-SESECTQWLNTKPRGSVLYVSFGSYAHASKN 300 (478)
Q Consensus 229 ~~~~~le~~~~~~~~~~~p-~~~vGp~~~~-~~~~---~--~~~~~l~-~~~~~~~~l~~~~~~~~Vyvs~Gs~~~~~~~ 300 (478)
|++++||++.++++++.+| +++|||+... .... . ....++| ++.++.+|++.++++++|||||||......+
T Consensus 232 nt~~~le~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~ 311 (482)
T 2pq6_A 232 NTFNELESDVINALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPE 311 (482)
T ss_dssp SSCGGGGHHHHHHHHTTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHH
T ss_pred cChHHHhHHHHHHHHHhCCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHH
Confidence 9999999999999998777 9999999753 1110 0 0001232 2456899999988889999999999888888
Q ss_pred HHHHHHHHHhhCCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChHhhhhccCcceeeeccCchhhHHHH
Q 011724 301 DIVEIALGLLLSEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQIDVISHSAIGGFLTHCGWNSIQESI 380 (478)
Q Consensus 301 ~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~~vL~~~~v~~~ItHGG~~s~~Eal 380 (478)
.+.+++.+|++.+.++||+++.....+ ....+|++|.++ .++|+++++|+||.++|+|+++++||||||+||++||+
T Consensus 312 ~~~~~~~~l~~~~~~~l~~~~~~~~~~-~~~~l~~~~~~~--~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal 388 (482)
T 2pq6_A 312 QLLEFAWGLANCKKSFLWIIRPDLVIG-GSVIFSSEFTNE--IADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESI 388 (482)
T ss_dssp HHHHHHHHHHHTTCEEEEECCGGGSTT-TGGGSCHHHHHH--HTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEEcCCcccc-ccccCcHhHHHh--cCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHH
Confidence 899999999999999999987441100 012267788777 78999999999999999999999999999999999999
Q ss_pred hcCcceeccCcccchhHHHHHhh-c---------ccCHHHHHHHHHHHhCCCChH---HHHHHHHHHHHHHHHHHhcCCC
Q 011724 381 WCSVPLLCFPLLTDQFTNRKLVK-S---------SITKEEVSEKINRLMSGKSSD---ELRKNIKEVRKKLENALSADGS 447 (478)
Q Consensus 381 ~~GvP~l~~P~~~DQ~~na~rv~-~---------~~t~~~l~~~v~~ll~~~~~~---~~r~~a~~l~~~~~~a~~~gg~ 447 (478)
++|||||++|++.||+.||++++ + .+++++|.++|+++|. ++ +||+||+++++++++|+.+|||
T Consensus 389 ~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~l~~~i~~ll~---~~~~~~~r~~a~~l~~~~~~a~~~gGs 465 (482)
T 2pq6_A 389 CAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREELAKLINEVIA---GDKGKKMKQKAMELKKKAEENTRPGGC 465 (482)
T ss_dssp HHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCHHHHHHHHHHHHT---SHHHHHHHHHHHHHHHHHHHHTSTTCH
T ss_pred HcCCCEEecCcccchHHHHHHHHHHhCEEEEECCCCCHHHHHHHHHHHHc---CCcHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999996 4 5799999999999998 66 6999999999999999999999
Q ss_pred hHHHHHHHHHHHHhc
Q 011724 448 SQKNFNQFINDVQFL 462 (478)
Q Consensus 448 ~~~~~~~~i~~~~~~ 462 (478)
+..++++|++++...
T Consensus 466 s~~~l~~~v~~~~~~ 480 (482)
T 2pq6_A 466 SYMNLNKVIKDVLLK 480 (482)
T ss_dssp HHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999988543
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=7e-59 Score=480.26 Aligned_cols=440 Identities=29% Similarity=0.477 Sum_probs=326.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCc--hhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCC
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASS-GFTITFVNTHS--IHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGL 84 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 84 (478)
+++||+++|+|+.||++|+++||++|++| ||+|||++++. +...++ .. .. ....+++|+.++...
T Consensus 5 ~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~---~~--------~~-~~~~~i~~~~l~~~~ 72 (480)
T 2vch_A 5 KTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQR---TV--------LD-SLPSSISSVFLPPVD 72 (480)
T ss_dssp -CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHH---HH--------HC--CCTTEEEEECCCCC
T ss_pred CCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhh---hh--------cc-ccCCCceEEEcCCCC
Confidence 55899999999999999999999999998 99999999987 444444 20 00 001289999998653
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCc-cEEEEcCCchhhHHHHHHcCCccEEEecchhHHHHHHHhh
Q 011724 85 PLNFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEM-NCLVTDTFFVWSSMIAKKYNLVNISFWTEPALVLTLYYHM 163 (478)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~p-D~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 163 (478)
.+......+....+......+...++++++.+.. ..++ |+||+|.+..|+..+|+++|||++.++++++..+....++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~-~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~ 151 (480)
T 2vch_A 73 LTDLSSSTRIESRISLTVTRSNPELRKVFDSFVE-GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHL 151 (480)
T ss_dssp CTTSCTTCCHHHHHHHHHHTTHHHHHHHHHHHHH-TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHH
T ss_pred CCCCCCchhHHHHHHHHHHhhhHHHHHHHHHhcc-CCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHH
Confidence 2221112233333334445566778888877631 2467 9999999999999999999999999999998877776666
Q ss_pred hhhhhcCCCCCCCCCCCccccCCCCCCCCccccchhhhhcCCchHHHHHHHHHhhhhccccEEEecChhhhcHHHHHHHH
Q 011724 164 DLLRSHGHFASTDNREDTIDYIPGVRAIERKDLMSYLQATDTSTVVHRIIQKAFEDVKRVDFILCNTVHELESETISALH 243 (478)
Q Consensus 164 ~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~~ 243 (478)
+.....+..++... .....+|++++....++...+.. .....++.+......+.+.+++++|++.++|+..+....
T Consensus 152 ~~~~~~~~~~~~~~--~~~~~~Pg~~p~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~ 227 (480)
T 2vch_A 152 PKLDETVSCEFREL--TEPLMLPGCVPVAGKDFLDPAQD--RKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQ 227 (480)
T ss_dssp HHHHHHCCSCGGGC--SSCBCCTTCCCBCGGGSCGGGSC--TTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHH
T ss_pred HHHHhcCCCccccc--CCcccCCCCCCCChHHCchhhhc--CCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHH
Confidence 54443332222110 11124677766655555544321 112344444445556677889999999999998777765
Q ss_pred h---cCC-ccccccCCCCCCCCCCCCCCCCChhhHhHhhcCCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEE
Q 011724 244 Q---KQP-TYAIGPIFPAGFTKSLVPTSLWSESECTQWLNTKPRGSVLYVSFGSYAHASKNDIVEIALGLLLSEVSFVWV 319 (478)
Q Consensus 244 ~---~~p-~~~vGp~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~ 319 (478)
+ .+| +++|||++....... ..+. ++++.+||+.++++++|||||||......+.+.+++.+|++.++++||+
T Consensus 228 ~~~~~~~~v~~vGpl~~~~~~~~--~~~~--~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~ 303 (480)
T 2vch_A 228 EPGLDKPPVYPVGPLVNIGKQEA--KQTE--ESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWV 303 (480)
T ss_dssp SCCTTCCCEEECCCCCCCSCSCC---------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred hcccCCCcEEEEecccccccccc--Cccc--hhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEE
Confidence 3 146 999999986532100 0123 6789999999888899999999999888899999999999999999999
Q ss_pred ECCCCCC-----------CCccCCCChhhhhhhccCCCeEEee-ccChHhhhhccCcceeeeccCchhhHHHHhcCccee
Q 011724 320 LRPDIVS-----------SDETDFLPVGFEEKIKISGRGLIVP-WCSQIDVISHSAIGGFLTHCGWNSIQESIWCSVPLL 387 (478)
Q Consensus 320 ~~~~~~~-----------~~~~~~l~~~~~~~~~~~~nv~v~~-~ipq~~vL~~~~v~~~ItHGG~~s~~Eal~~GvP~l 387 (478)
++..... .+..+.+|++|.++ ..++.+++. |+||.+||+|+++++||||||+||++||+++|||||
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~--~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i 381 (480)
T 2vch_A 304 IRSPSGIANSSYFDSHSQTDPLTFLPPGFLER--TKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLI 381 (480)
T ss_dssp ECCCCSSTTTTTTCC--CSCGGGGSCTTHHHH--TTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEE
T ss_pred ECCccccccccccccccccchhhhcCHHHHHH--hCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEE
Confidence 9754210 00112467777666 556666665 999999999999999999999999999999999999
Q ss_pred ccCcccchhHHHHHh-hc-------------ccCHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHhcCCChHHHHH
Q 011724 388 CFPLLTDQFTNRKLV-KS-------------SITKEEVSEKINRLMSGKSSDELRKNIKEVRKKLENALSADGSSQKNFN 453 (478)
Q Consensus 388 ~~P~~~DQ~~na~rv-~~-------------~~t~~~l~~~v~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~ 453 (478)
++|+++||+.||+++ ++ .+++++|+++|+++|.++++++||+||+++++++++|+.+||++...++
T Consensus 382 ~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~ 461 (480)
T 2vch_A 382 AWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALS 461 (480)
T ss_dssp ECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHH
T ss_pred eccccccchHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 999999999999997 45 2789999999999998666789999999999999999999999999999
Q ss_pred HHHHHHHhcCccccCCCcc
Q 011724 454 QFINDVQFLTPKKCGSATS 472 (478)
Q Consensus 454 ~~i~~~~~~~~~~~~~~~~ 472 (478)
+|++.+.. .++|-+..-
T Consensus 462 ~~v~~~~~--~~~~~~~~~ 478 (480)
T 2vch_A 462 LVALKWKA--HKKELEQNG 478 (480)
T ss_dssp HHHHHHHH--HHHHHHC--
T ss_pred HHHHHHHH--hHHHhhhcC
Confidence 99999976 445544443
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=7.5e-59 Score=477.00 Aligned_cols=436 Identities=25% Similarity=0.492 Sum_probs=319.9
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEE
Q 011724 1 MENNHKKPKPHAIAICYPLQGHVIPFVNLALKLASSG--FTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYA 78 (478)
Q Consensus 1 ~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 78 (478)
|++. ++++||+++|+|+.||++|+++||+.|++|| +.|||++++.....+. .... + ....+++|+
T Consensus 1 m~~~--~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~---~~~~------~--~~~~~i~~~ 67 (456)
T 2c1x_A 1 MSQT--TTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIF---HDSM------H--TMQCNIKSY 67 (456)
T ss_dssp --------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC------------------CTTEEEE
T ss_pred CCCC--CCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhh---cccc------c--cCCCceEEE
Confidence 5554 4568999999999999999999999999986 4568888876555543 2100 0 001379999
Q ss_pred EcCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhcc-CCCccEEEEcCCchhhHHHHHHcCCccEEEecchhHHH
Q 011724 79 TVSDGLPLNFDRSLNHDQFMECLLHVFSAHVDELVGNLIQL-NPEMNCLVTDTFFVWSSMIAKKYNLVNISFWTEPALVL 157 (478)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~-~~~pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~ 157 (478)
.+++++++..+........+..+...+...++++++.+... +.+||+||+|.++.|+..+|+++|||+|.++++.+..+
T Consensus 68 ~i~~glp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~ 147 (456)
T 2c1x_A 68 DISDGVPEGYVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSL 147 (456)
T ss_dssp ECCCCCCTTCCCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHH
T ss_pred eCCCCCCCcccccCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHH
Confidence 99987766432222222333333333334444555443211 25799999999999999999999999999999988776
Q ss_pred HHHHhhhhhhhc-CCCCCCCCCCCccccCCCCCCCCccccchhhhhcCCchHHHHHHHHHhhhhccccEEEecChhhhcH
Q 011724 158 TLYYHMDLLRSH-GHFASTDNREDTIDYIPGVRAIERKDLMSYLQATDTSTVVHRIIQKAFEDVKRVDFILCNTVHELES 236 (478)
Q Consensus 158 ~~~~~~~~~~~~-~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~ 236 (478)
....+.+.+... +..+..........++|+++....++++..+........+.+.+....+...+++.+++|+++++|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~ 227 (456)
T 2c1x_A 148 STHVYIDEIREKIGVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDD 227 (456)
T ss_dssp HHHHTHHHHHHHHCSSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCH
T ss_pred HHHhhhHHHHhccCCcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhH
Confidence 655444332221 1111101112334467888766666665433211112223333333334567889999999999999
Q ss_pred HHHHHHHhcCC-ccccccCCCCCCCCCCCCCCCCChhhHhHhhcCCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCe
Q 011724 237 ETISALHQKQP-TYAIGPIFPAGFTKSLVPTSLWSESECTQWLNTKPRGSVLYVSFGSYAHASKNDIVEIALGLLLSEVS 315 (478)
Q Consensus 237 ~~~~~~~~~~p-~~~vGp~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~ 315 (478)
+.++.+++..| +++|||+....... .+.++.++.+|++.++++++|||||||......+.+.+++.+|++.+.+
T Consensus 228 ~~~~~~~~~~~~~~~vGpl~~~~~~~-----~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~ 302 (456)
T 2c1x_A 228 SLTNDLKSKLKTYLNIGPFNLITPPP-----VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVP 302 (456)
T ss_dssp HHHHHHHHHSSCEEECCCHHHHC--------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhcCCCEEEecCcccCcccc-----cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCe
Confidence 99898888888 99999997643211 1211356889999988889999999999988888999999999999999
Q ss_pred EEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChHhhhhccCcceeeeccCchhhHHHHhcCcceeccCcccch
Q 011724 316 FVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQIDVISHSAIGGFLTHCGWNSIQESIWCSVPLLCFPLLTDQ 395 (478)
Q Consensus 316 ~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~~vL~~~~v~~~ItHGG~~s~~Eal~~GvP~l~~P~~~DQ 395 (478)
+||+++.. ..+.+|++|.++ .++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||
T Consensus 303 ~lw~~~~~-----~~~~l~~~~~~~--~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ 375 (456)
T 2c1x_A 303 FIWSLRDK-----ARVHLPEGFLEK--TRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQ 375 (456)
T ss_dssp EEEECCGG-----GGGGSCTTHHHH--HTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred EEEEECCc-----chhhCCHHHHhh--cCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhH
Confidence 99999755 223477777766 78899999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhc-----------ccCHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 011724 396 FTNRKLVKS-----------SITKEEVSEKINRLMSGKSSDELRKNIKEVRKKLENALSADGSSQKNFNQFINDVQF 461 (478)
Q Consensus 396 ~~na~rv~~-----------~~t~~~l~~~v~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~i~~~~~ 461 (478)
+.||+++++ .+++++|.++|+++|.+++.++||+||+++++++++|+.+||||...+++|++++..
T Consensus 376 ~~Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 376 RLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp HHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 999999987 578999999999999821123899999999999999999999999999999999854
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=9.4e-57 Score=462.58 Aligned_cols=426 Identities=26% Similarity=0.421 Sum_probs=322.4
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCchh-----hhhhhhcCCCCCcchhccccCCCC
Q 011724 1 MENNHKKPKPHAIAICYPLQGHVIPFVNLALKLASS--GFTITFVNTHSIH-----HQITKAQSNGDEDDIFAGARKAGL 73 (478)
Q Consensus 1 ~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 73 (478)
|+|++.++++||+++|+|+.||++|+++||++|++| ||+|||++++.+. ..++ .. . ....
T Consensus 1 ~~~~~~~~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~---~~--------~--~~~~ 67 (463)
T 2acv_A 1 MSMSDINKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIK---SV--------L--ASQP 67 (463)
T ss_dssp --CHHHHHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHH---HH--------H--CSCT
T ss_pred CCcccCCCCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhh---hc--------c--cCCC
Confidence 666654556899999999999999999999999999 9999999998753 2332 10 0 1113
Q ss_pred CeEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCchhhHHHHHHcCCccEEEecch
Q 011724 74 DIRYATVSDGLPLNFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFFVWSSMIAKKYNLVNISFWTEP 153 (478)
Q Consensus 74 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~~ 153 (478)
+++|+.+|++..++.+........+......+...++++++.+. ..+||+||+|.++.|+..+|+++|||++.+++++
T Consensus 68 ~i~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~--~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~ 145 (463)
T 2acv_A 68 QIQLIDLPEVEPPPQELLKSPEFYILTFLESLIPHVKATIKTIL--SNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSN 145 (463)
T ss_dssp TEEEEECCCCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHC--CTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSC
T ss_pred CceEEECCCCCCCcccccCCccHHHHHHHHhhhHHHHHHHHhcc--CCCCeEEEECCcchhHHHHHHHcCCCEEEEeCch
Confidence 89999999763222211111111233334556677888887762 2579999999999999999999999999999998
Q ss_pred hHHHHHHHhhhhhhhcCCCCCCCCCCCc---cccCCCC-CCCCccccchhhhhcCCchHHHHHHHHHhhhhccccEEEec
Q 011724 154 ALVLTLYYHMDLLRSHGHFASTDNREDT---IDYIPGV-RAIERKDLMSYLQATDTSTVVHRIIQKAFEDVKRVDFILCN 229 (478)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~---~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 229 (478)
+..+....+++..... .+... ... ...+|++ +....+++...+... ...++.+........+.+.+++|
T Consensus 146 ~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~pg~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~n 218 (463)
T 2acv_A 146 VGFLSLMLSLKNRQIE--EVFDD--SDRDHQLLNIPGISNQVPSNVLPDACFNK---DGGYIAYYKLAERFRDTKGIIVN 218 (463)
T ss_dssp HHHHHHHHHGGGSCTT--CCCCC--SSGGGCEECCTTCSSCEEGGGSCHHHHCT---TTHHHHHHHHHHHHTTSSEEEES
T ss_pred HHHHHHHHHHHhhccc--CCCCC--ccccCceeECCCCCCCCChHHCchhhcCC---chHHHHHHHHHHhcccCCEEEEC
Confidence 8877766666544311 11111 111 3357777 665555555433211 12444444555566778899999
Q ss_pred ChhhhcHHHHHHHHhc---CC-ccccccCCCCCC-CCCCCCCCCCChhhHhHhhcCCCCCceEEEEecccc-cCCHHHHH
Q 011724 230 TVHELESETISALHQK---QP-TYAIGPIFPAGF-TKSLVPTSLWSESECTQWLNTKPRGSVLYVSFGSYA-HASKNDIV 303 (478)
Q Consensus 230 ~~~~le~~~~~~~~~~---~p-~~~vGp~~~~~~-~~~~~~~~l~~~~~~~~~l~~~~~~~~Vyvs~Gs~~-~~~~~~~~ 303 (478)
|++++|++..+...+. .| +++|||+..... ......... +.++.+|++.++++++|||||||.. ....+.+.
T Consensus 219 t~~ele~~~~~~l~~~~~p~~~v~~vGpl~~~~~~~~~~~~~~~--~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~ 296 (463)
T 2acv_A 219 TFSDLEQSSIDALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQ--HDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIR 296 (463)
T ss_dssp CCHHHHHHHHHHHHHHCTTSCCEEECCCCCCSSCCCBTTBCHHH--HHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHH
T ss_pred CHHHHhHHHHHHHHhccccCCcEEEeCCCccccccccccccccc--chhHHHHHhcCCCCceEEEEeccccccCCHHHHH
Confidence 9999999987776653 35 999999986432 100000012 5789999999888899999999999 77888899
Q ss_pred HHHHHHhhCCCeEEEEECCCCCCCCccCCCChhhhhhhcc--CCCeEEeeccChHhhhhccCcceeeeccCchhhHHHHh
Q 011724 304 EIALGLLLSEVSFVWVLRPDIVSSDETDFLPVGFEEKIKI--SGRGLIVPWCSQIDVISHSAIGGFLTHCGWNSIQESIW 381 (478)
Q Consensus 304 ~~~~al~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~--~~nv~v~~~ipq~~vL~~~~v~~~ItHGG~~s~~Eal~ 381 (478)
+++.+|++.+++|||+++.+ .+.+|++|.++ . ++|+++++|+||.++|+|+++++||||||+||++||++
T Consensus 297 ~~~~~l~~~~~~~l~~~~~~------~~~l~~~~~~~--~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~ 368 (463)
T 2acv_A 297 EIALGLKHSGVRFLWSNSAE------KKVFPEGFLEW--MELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMW 368 (463)
T ss_dssp HHHHHHHHHTCEEEEECCCC------GGGSCTTHHHH--HHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHH
T ss_pred HHHHHHHhCCCcEEEEECCC------cccCChhHHHh--hccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHH
Confidence 99999999999999999742 12366777665 5 78999999999999999999999999999999999999
Q ss_pred cCcceeccCcccchhHHHHHh-hc-----c-----------cCHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHhc
Q 011724 382 CSVPLLCFPLLTDQFTNRKLV-KS-----S-----------ITKEEVSEKINRLMSGKSSDELRKNIKEVRKKLENALSA 444 (478)
Q Consensus 382 ~GvP~l~~P~~~DQ~~na~rv-~~-----~-----------~t~~~l~~~v~~ll~~~~~~~~r~~a~~l~~~~~~a~~~ 444 (478)
+|||||++|++.||+.||+++ ++ . +++++|.++|+++|++ +++||+||+++++++++|+.+
T Consensus 369 ~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~--~~~~r~~a~~l~~~~~~a~~~ 446 (463)
T 2acv_A 369 FGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDK--DSIVHKKVQEMKEMSRNAVVD 446 (463)
T ss_dssp TTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCT--TCTHHHHHHHHHHHHHHHTST
T ss_pred cCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999995 55 2 3789999999999951 378999999999999999999
Q ss_pred CCChHHHHHHHHHHHH
Q 011724 445 DGSSQKNFNQFINDVQ 460 (478)
Q Consensus 445 gg~~~~~~~~~i~~~~ 460 (478)
||||..++++|++++.
T Consensus 447 gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 447 GGSSLISVGKLIDDIT 462 (463)
T ss_dssp TSHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHhc
Confidence 9999999999999885
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=4.1e-43 Score=358.08 Aligned_cols=386 Identities=14% Similarity=0.177 Sum_probs=260.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCCCC
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLPL 86 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 86 (478)
++||||+|+++++.||++|+++||++|+++||+|+|++++.+.+.++ .. +++|+.++...+.
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~---~~---------------g~~~~~~~~~~~~ 71 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVK---AA---------------GATPVVYDSILPK 71 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH---HH---------------TCEEEECCCCSCC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHH---hC---------------CCEEEecCccccc
Confidence 46789999999999999999999999999999999999999988887 54 7888888865443
Q ss_pred CCCC----CCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCchhhHHHHHHcCCccEEEecchhHHHHHHHh
Q 011724 87 NFDR----SLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFFVWSSMIAKKYNLVNISFWTEPALVLTLYYH 162 (478)
Q Consensus 87 ~~~~----~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 162 (478)
.... ..+....+..+.......++++.+.++. .+||+||+|.+..++..+|+++|||++.+++.+.........
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~ 149 (424)
T 2iya_A 72 ESNPEESWPEDQESAMGLFLDEAVRVLPQLEDAYAD--DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEED 149 (424)
T ss_dssp TTCTTCCCCSSHHHHHHHHHHHHHHHHHHHHHHTTT--SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHH
T ss_pred cccchhhcchhHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccc
Confidence 2111 2233344433333334444555555554 679999999988899999999999999998765421111000
Q ss_pred hhhhhhcCCCCCCCCCCCccccCCC-CCC-CCccccchhhhhcCCchHHHHHHHHHh-------hhhccccEEEecChhh
Q 011724 163 MDLLRSHGHFASTDNREDTIDYIPG-VRA-IERKDLMSYLQATDTSTVVHRIIQKAF-------EDVKRVDFILCNTVHE 233 (478)
Q Consensus 163 ~~~~~~~~~~p~~~~~~~~~~~~p~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~~~~ 233 (478)
+.. ...+..... .. ...|. ... ............ .......+...+ ......+.+++++.++
T Consensus 150 ~~~-~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~ 220 (424)
T 2iya_A 150 VPA-VQDPTADRG----EE-AAAPAGTGDAEEGAEAEDGLVR---FFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRT 220 (424)
T ss_dssp SGG-GSCCCC--------------------------HHHHHH---HHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTT
T ss_pred ccc-ccccccccc----cc-cccccccccchhhhccchhHHH---HHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchh
Confidence 000 000000000 00 00000 000 000000000000 000011111111 1112467889999998
Q ss_pred hcHHHHHHHHhcC-C-ccccccCCCCCCCCCCCCCCCCChhhHhHhhcCCCCCceEEEEecccccCCHHHHHHHHHHHhh
Q 011724 234 LESETISALHQKQ-P-TYAIGPIFPAGFTKSLVPTSLWSESECTQWLNTKPRGSVLYVSFGSYAHASKNDIVEIALGLLL 311 (478)
Q Consensus 234 le~~~~~~~~~~~-p-~~~vGp~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~~~al~~ 311 (478)
++++ ...+ + +++|||++... .+..+|++..+++++||+++||......+.+..+++++++
T Consensus 221 l~~~-----~~~~~~~~~~vGp~~~~~-------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~ 282 (424)
T 2iya_A 221 FQIK-----GDTVGDNYTFVGPTYGDR-------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDG 282 (424)
T ss_dssp TSTT-----GGGCCTTEEECCCCCCCC-------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTT
T ss_pred hCCC-----ccCCCCCEEEeCCCCCCc-------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhc
Confidence 8743 2333 4 99999986421 1123566655667899999999986667888999999999
Q ss_pred CCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChHhhhhccCcceeeeccCchhhHHHHhcCcceeccCc
Q 011724 312 SEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQIDVISHSAIGGFLTHCGWNSIQESIWCSVPLLCFPL 391 (478)
Q Consensus 312 ~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~~vL~~~~v~~~ItHGG~~s~~Eal~~GvP~l~~P~ 391 (478)
.+.+++|.++.. ...+.+ .. .++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|.
T Consensus 283 ~~~~~~~~~g~~--------~~~~~~-~~--~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~ 349 (424)
T 2iya_A 283 LDWHVVLSVGRF--------VDPADL-GE--VPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQ 349 (424)
T ss_dssp CSSEEEEECCTT--------SCGGGG-CS--CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCC
T ss_pred CCcEEEEEECCc--------CChHHh-cc--CCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecC
Confidence 899999988754 111122 12 5789999999999999999998 9999999999999999999999999
Q ss_pred ccchhHHHHHhhc----------ccCHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 011724 392 LTDQFTNRKLVKS----------SITKEEVSEKINRLMSGKSSDELRKNIKEVRKKLENALSADGSSQKNFNQFINDVQ 460 (478)
Q Consensus 392 ~~DQ~~na~rv~~----------~~t~~~l~~~v~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~i~~~~ 460 (478)
..||+.||.++++ .++.++|.++|+++++ |++++++++++++++++ .+++. .+.+.|+++.
T Consensus 350 ~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~----~~~~~-~~~~~i~~~~ 420 (424)
T 2iya_A 350 IAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLAVAS---DPGVAERLAAVRQEIRE----AGGAR-AAADILEGIL 420 (424)
T ss_dssp SHHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHT----SCHHH-HHHHHHHHHH
T ss_pred ccchHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHh----cCcHH-HHHHHHHHHH
Confidence 9999999999988 4689999999999998 89999999999999976 23433 4445555443
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=2.1e-42 Score=349.67 Aligned_cols=352 Identities=17% Similarity=0.190 Sum_probs=225.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCCCC-
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLPL- 86 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~- 86 (478)
+.|||||+++|+.||++|+++||++|++|||+|||++++.+.+.++ . ++.+..+......
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~----~---------------g~~~~~~~~~~~~~ 81 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE----A---------------GLCAVDVSPGVNYA 81 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT----T---------------TCEEEESSTTCCSH
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh----c---------------CCeeEecCCchhHh
Confidence 3489999999999999999999999999999999999998877654 3 4566655432110
Q ss_pred ------C---CCC----CCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCchhhHHHHHHcCCccEEEecch
Q 011724 87 ------N---FDR----SLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFFVWSSMIAKKYNLVNISFWTEP 153 (478)
Q Consensus 87 ------~---~~~----~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~~ 153 (478)
. ... ......+...+.......+.++++.++. .+||+||+|.+.+++..+|+.+|||++.+..++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~ 159 (400)
T 4amg_A 82 KLFVPDDTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS--WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGP 159 (400)
T ss_dssp HHHSCCC------------CHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHTTCCEEECCSST
T ss_pred hhccccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEECcchHHHHHHHHHcCCCceeecccc
Confidence 0 000 0111112222222333344444444444 569999999999999999999999999876543
Q ss_pred hHHHHHHHhhhhhhhcCCCCCCCCCCCccccCCCCCCCCccccchhhhhcCCchHHHHHHHHHhhh--hccccEEEecCh
Q 011724 154 ALVLTLYYHMDLLRSHGHFASTDNREDTIDYIPGVRAIERKDLMSYLQATDTSTVVHRIIQKAFED--VKRVDFILCNTV 231 (478)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~ 231 (478)
.... +.+ ..... .........+.. .......+....
T Consensus 160 ~~~~----------------------------~~~--------~~~~~------~~l~~~~~~~~~~~~~~~~~~~~~~~ 197 (400)
T 4amg_A 160 ADSE----------------------------PGL--------GALIR------RAMSKDYERHGVTGEPTGSVRLTTTP 197 (400)
T ss_dssp TTCC----------------------------HHH--------HHHHH------HHTHHHHHHTTCCCCCSCEEEEECCC
T ss_pred cccc----------------------------cch--------hhHHH------HHHHHHHHHhCCCcccccchhhcccC
Confidence 2211 000 00000 000011111110 111112222222
Q ss_pred hhhcHHHHHHHHhc-CC-ccccccCCCCCCCCCCCCCCCCChhhHhHhhcCCCCCceEEEEecccccCC--HHHHHHHHH
Q 011724 232 HELESETISALHQK-QP-TYAIGPIFPAGFTKSLVPTSLWSESECTQWLNTKPRGSVLYVSFGSYAHAS--KNDIVEIAL 307 (478)
Q Consensus 232 ~~le~~~~~~~~~~-~p-~~~vGp~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Vyvs~Gs~~~~~--~~~~~~~~~ 307 (478)
..+. ...+... .| ...+.+.... ....+.+|++..+++++|||||||..... .+.+..++.
T Consensus 198 ~~~~---~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~ 262 (400)
T 4amg_A 198 PSVE---ALLPEDRRSPGAWPMRYVPYN------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFS 262 (400)
T ss_dssp HHHH---HTSCGGGCCTTCEECCCCCCC------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHH
T ss_pred chhh---ccCcccccCCcccCccccccc------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHH
Confidence 1111 0000000 01 2222222111 13334568888888999999999987543 456888999
Q ss_pred HHhhCCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChHhhhhccCcceeeeccCchhhHHHHhcCccee
Q 011724 308 GLLLSEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQIDVISHSAIGGFLTHCGWNSIQESIWCSVPLL 387 (478)
Q Consensus 308 al~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~~vL~~~~v~~~ItHGG~~s~~Eal~~GvP~l 387 (478)
++++.+.+++|..++. .. +.. .. +++|+++.+|+||.++|+|+++ ||||||+||++||+++|||||
T Consensus 263 ~l~~~~~~~v~~~~~~-----~~----~~~-~~--~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v 328 (400)
T 4amg_A 263 EVADVDAEFVLTLGGG-----DL----ALL-GE--LPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQC 328 (400)
T ss_dssp HGGGSSSEEEEECCTT-----CC----CCC-CC--CCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEE
T ss_pred HhhccCceEEEEecCc-----cc----ccc-cc--CCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEE
Confidence 9999999999998755 11 111 12 7899999999999999999998 999999999999999999999
Q ss_pred ccCcccchhHHHHHhhc-----cc-CHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 011724 388 CFPLLTDQFTNRKLVKS-----SI-TKEEVSEKINRLMSGKSSDELRKNIKEVRKKLENALSADGSSQKNFNQFINDV 459 (478)
Q Consensus 388 ~~P~~~DQ~~na~rv~~-----~~-t~~~l~~~v~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~i~~~ 459 (478)
++|+..||+.||+++++ .+ +.+.+.++|+++|+ |++||+||+++++++++. .+. ..+.+.|+++
T Consensus 329 ~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~al~~lL~---d~~~r~~a~~l~~~~~~~----~~~-~~~a~~le~l 398 (400)
T 4amg_A 329 VIPHGSYQDTNRDVLTGLGIGFDAEAGSLGAEQCRRLLD---DAGLREAALRVRQEMSEM----PPP-AETAAXLVAL 398 (400)
T ss_dssp ECCC---CHHHHHHHHHHTSEEECCTTTCSHHHHHHHHH---CHHHHHHHHHHHHHHHTS----CCH-HHHHHHHHHH
T ss_pred EecCcccHHHHHHHHHHCCCEEEcCCCCchHHHHHHHHc---CHHHHHHHHHHHHHHHcC----CCH-HHHHHHHHHh
Confidence 99999999999999998 22 23344678889998 999999999999999863 333 3445555654
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=5.1e-41 Score=341.68 Aligned_cols=383 Identities=10% Similarity=0.052 Sum_probs=248.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCCCCCCC
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLPLNFD 89 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 89 (478)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.++ .. +++|+.++....+...
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~---~~---------------g~~~~~i~~~~~~~~~ 62 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLA---EV---------------GVPHVPVGPSARAPIQ 62 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH---HT---------------TCCEEECCC-------
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHH---Hc---------------CCeeeeCCCCHHHHhh
Confidence 79999999999999999999999999999999999999888777 55 7888888754321111
Q ss_pred C-CCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcC-Cchh--hHHHHHHcCCccEEEecchhHHHHHHHhhhh
Q 011724 90 R-SLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDT-FFVW--SSMIAKKYNLVNISFWTEPALVLTLYYHMDL 165 (478)
Q Consensus 90 ~-~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 165 (478)
. .......+. ..+......+++.+.....+||+||+|. +..+ +..+|+++|||+|.+++++....
T Consensus 63 ~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~-------- 131 (415)
T 1iir_A 63 RAKPLTAEDVR---RFTTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP-------- 131 (415)
T ss_dssp CCSCCCHHHHH---HHHHHHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC--------
T ss_pred cccccchHHHH---HHHHHHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC--------
Confidence 1 111111111 1122222233333321126799999998 5678 89999999999999987764310
Q ss_pred hhhcCCCCCCCCCCCccccCCCCCCCCccccchh-hhhc--CCchHHHHHHHHHhh---------hhccccEEEecChhh
Q 011724 166 LRSHGHFASTDNREDTIDYIPGVRAIERKDLMSY-LQAT--DTSTVVHRIIQKAFE---------DVKRVDFILCNTVHE 233 (478)
Q Consensus 166 ~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~---------~~~~~~~~l~~~~~~ 233 (478)
....|... ... .+|+ ......+... .... .......+.+...+. ..... .+++++.+.
T Consensus 132 ---~~~~p~~~---~~~-~~~~--~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~ 201 (415)
T 1iir_A 132 ---SPYYPPPP---LGE-PSTQ--DTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPV 201 (415)
T ss_dssp ---CSSSCCCC---------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTT
T ss_pred ---CcccCCcc---CCc-cccc--hHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChh
Confidence 00011000 000 0000 0000000000 0000 000000011111110 01122 578888888
Q ss_pred hcHHHHHHHHhcCCccccccCCCCCCCCCCCCCCCCChhhHhHhhcCCCCCceEEEEecccccCCHHHHHHHHHHHhhCC
Q 011724 234 LESETISALHQKQPTYAIGPIFPAGFTKSLVPTSLWSESECTQWLNTKPRGSVLYVSFGSYAHASKNDIVEIALGLLLSE 313 (478)
Q Consensus 234 le~~~~~~~~~~~p~~~vGp~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~~~al~~~~ 313 (478)
+++. +++.+++++|||+..... .+. +.++.+|++.+ +++|||++||.. ...+.+..+++++++.+
T Consensus 202 l~~~----~~~~~~~~~vG~~~~~~~------~~~--~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~ 266 (415)
T 1iir_A 202 LAPL----QPTDLDAVQTGAWILPDE------RPL--SPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHG 266 (415)
T ss_dssp TSCC----CCCSSCCEECCCCCCCCC------CCC--CHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTT
T ss_pred hcCC----CcccCCeEeeCCCccCcc------cCC--CHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCC
Confidence 8741 122224889999986432 123 67889999765 368999999997 56778889999999999
Q ss_pred CeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChHhhhhccCcceeeeccCchhhHHHHhcCcceeccCccc
Q 011724 314 VSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQIDVISHSAIGGFLTHCGWNSIQESIWCSVPLLCFPLLT 393 (478)
Q Consensus 314 ~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~~vL~~~~v~~~ItHGG~~s~~Eal~~GvP~l~~P~~~ 393 (478)
.+++|+++.. ..+ . .. .++|+.+.+|+||.++|+.+++ ||||||+||++||+++|||+|++|...
T Consensus 267 ~~~v~~~g~~-----~~~-~-----~~--~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~ 331 (415)
T 1iir_A 267 RRVILSRGWA-----DLV-L-----PD--DGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMA 331 (415)
T ss_dssp CCEEECTTCT-----TCC-C-----SS--CGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCST
T ss_pred CeEEEEeCCC-----ccc-c-----cC--CCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCC
Confidence 9999988754 100 1 12 5678999999999999988888 999999999999999999999999999
Q ss_pred chhHHHHHhhc----------ccCHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcC
Q 011724 394 DQFTNRKLVKS----------SITKEEVSEKINRLMSGKSSDELRKNIKEVRKKLENALSADGSSQKNFNQFINDVQFLT 463 (478)
Q Consensus 394 DQ~~na~rv~~----------~~t~~~l~~~v~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~i~~~~~~~ 463 (478)
||..||.++++ .++.++|.++|+++ . ++++++++++++++++. ..+...+.++|+++...+
T Consensus 332 dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~---~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~~~~~ 402 (415)
T 1iir_A 332 DQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATA-L---TPETHARATAVAGTIRT-----DGAAVAARLLLDAVSREK 402 (415)
T ss_dssp THHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHH-T---SHHHHHHHHHHHHHSCS-----CHHHHHHHHHHHHHHTC-
T ss_pred ccHHHHHHHHHCCCcccCCcCCCCHHHHHHHHHHH-c---CHHHHHHHHHHHHHHhh-----cChHHHHHHHHHHHHhcc
Confidence 99999999987 46899999999999 8 89999999999998864 334456667777776655
Q ss_pred ccccCCC
Q 011724 464 PKKCGSA 470 (478)
Q Consensus 464 ~~~~~~~ 470 (478)
.....-+
T Consensus 403 ~~~~~~~ 409 (415)
T 1iir_A 403 PTVSALE 409 (415)
T ss_dssp -------
T ss_pred cHHHHhh
Confidence 4443333
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2.8e-40 Score=336.37 Aligned_cols=378 Identities=13% Similarity=0.050 Sum_probs=249.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCCCCCCC
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLPLNFD 89 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 89 (478)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.++ .. +++|+.++........
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~---~~---------------g~~~~~~~~~~~~~~~ 62 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLA---EV---------------GVPHVPVGLPQHMMLQ 62 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH---HH---------------TCCEEECSCCGGGCCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHH---Hc---------------CCeeeecCCCHHHHHh
Confidence 79999999999999999999999999999999999999888887 44 7888887754211111
Q ss_pred C--CCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcC-Cchh--hHHHHHHcCCccEEEecchhHHHHHHHhhh
Q 011724 90 R--SLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDT-FFVW--SSMIAKKYNLVNISFWTEPALVLTLYYHMD 164 (478)
Q Consensus 90 ~--~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 164 (478)
. .......+..+ +......+++.+.....+||+||+|. +.++ +..+|+.+|||++.+.+++....
T Consensus 63 ~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~------- 132 (416)
T 1rrv_A 63 EGMPPPPPEEEQRL---AAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA------- 132 (416)
T ss_dssp TTSCCCCHHHHHHH---HHHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC-------
T ss_pred hccccchhHHHHHH---HHHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC-------
Confidence 0 01111111111 11222333333331126799999997 4567 89999999999999987653310
Q ss_pred hhhhcCCCCCCCCCCCccccCCCCCCCCccccchh-hhhc-C-CchHHHHHHHHHh---------hhhccccEEEecChh
Q 011724 165 LLRSHGHFASTDNREDTIDYIPGVRAIERKDLMSY-LQAT-D-TSTVVHRIIQKAF---------EDVKRVDFILCNTVH 232 (478)
Q Consensus 165 ~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~-~-~~~~~~~~~~~~~---------~~~~~~~~~l~~~~~ 232 (478)
....| . ...+...++. ....+... .... . ......+.+...+ +..... .+++++.+
T Consensus 133 ----~~~~p-~---~~~~~~~~~r---~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~ 200 (416)
T 1rrv_A 133 ----SPHLP-P---AYDEPTTPGV---TDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADP 200 (416)
T ss_dssp ----CSSSC-C---CBCSCCCTTC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCT
T ss_pred ----CcccC-C---CCCCCCCchH---HHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCc
Confidence 00001 0 0000000110 00000000 0000 0 0000011111111 011122 68888888
Q ss_pred hhcHHHHHHHHhcCCccccccCCCCCCCCCCCCCCCCChhhHhHhhcCCCCCceEEEEeccccc-CCHHHHHHHHHHHhh
Q 011724 233 ELESETISALHQKQPTYAIGPIFPAGFTKSLVPTSLWSESECTQWLNTKPRGSVLYVSFGSYAH-ASKNDIVEIALGLLL 311 (478)
Q Consensus 233 ~le~~~~~~~~~~~p~~~vGp~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Vyvs~Gs~~~-~~~~~~~~~~~al~~ 311 (478)
+++++ ++.+++++|||+..+.. .+. +.++.+|++.+ +++|||++||... ...+.+..+++++++
T Consensus 201 ~l~~~-----~~~~~~~~vG~~~~~~~------~~~--~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~ 265 (416)
T 1rrv_A 201 VLAPL-----QPDVDAVQTGAWLLSDE------RPL--PPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRA 265 (416)
T ss_dssp TTSCC-----CSSCCCEECCCCCCCCC------CCC--CHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHH
T ss_pred cccCC-----CCCCCeeeECCCccCcc------CCC--CHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHH
Confidence 88732 22224889999986532 123 67889999765 3689999999864 455678889999999
Q ss_pred CCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChHhhhhccCcceeeeccCchhhHHHHhcCcceeccCc
Q 011724 312 SEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQIDVISHSAIGGFLTHCGWNSIQESIWCSVPLLCFPL 391 (478)
Q Consensus 312 ~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~~vL~~~~v~~~ItHGG~~s~~Eal~~GvP~l~~P~ 391 (478)
.+.+++|+++.. ... . .. .++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|.
T Consensus 266 ~~~~~v~~~g~~--------~~~--~-~~--~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~ 330 (416)
T 1rrv_A 266 QGRRVILSRGWT--------ELV--L-PD--DRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPR 330 (416)
T ss_dssp TTCCEEEECTTT--------TCC--C-SC--CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCC
T ss_pred CCCeEEEEeCCc--------ccc--c-cC--CCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccC
Confidence 999999998755 111 0 12 6789999999999999988888 9999999999999999999999999
Q ss_pred ccchhHHHHHhhc----------ccCHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH-HHHH
Q 011724 392 LTDQFTNRKLVKS----------SITKEEVSEKINRLMSGKSSDELRKNIKEVRKKLENALSADGSSQKNFNQFI-NDVQ 460 (478)
Q Consensus 392 ~~DQ~~na~rv~~----------~~t~~~l~~~v~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~i-~~~~ 460 (478)
..||+.||.++++ .+++++|.++|+++ . |++|+++++++++++++ .++. .+.+.| +++.
T Consensus 331 ~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~---~~~~~~~~~~~~~~~~~----~~~~--~~~~~i~e~~~ 400 (416)
T 1rrv_A 331 NTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTV-L---APETRARAEAVAGMVLT----DGAA--AAADLVLAAVG 400 (416)
T ss_dssp SBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHH-T---SHHHHHHHHHHTTTCCC----CHHH--HHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHCCCccCCCCCCCCHHHHHHHHHHh-h---CHHHHHHHHHHHHHHhh----cCcH--HHHHHHHHHHh
Confidence 9999999999987 47899999999999 8 89999999999998874 2333 444555 7766
Q ss_pred hcCcccc
Q 011724 461 FLTPKKC 467 (478)
Q Consensus 461 ~~~~~~~ 467 (478)
..+....
T Consensus 401 ~~~~~~~ 407 (416)
T 1rrv_A 401 REKPAVP 407 (416)
T ss_dssp C------
T ss_pred ccCCCCc
Confidence 5543333
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.2e-38 Score=323.82 Aligned_cols=370 Identities=11% Similarity=0.127 Sum_probs=253.4
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCC
Q 011724 5 HKKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGL 84 (478)
Q Consensus 5 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 84 (478)
+..+||||+|++.++.||++|+++||++|+++||+|+|++++.+.+.++ .. ++.+..++...
T Consensus 16 ~~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~---~~---------------G~~~~~~~~~~ 77 (415)
T 3rsc_A 16 EGRHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVR---AA---------------GATVVPYQSEI 77 (415)
T ss_dssp ---CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHH---HT---------------TCEEEECCCST
T ss_pred CcccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHH---hc---------------CCEEEeccccc
Confidence 4567899999999999999999999999999999999999999999888 66 78888887543
Q ss_pred CCCCC----CCCCHHHHHHH-HHHHhhHHHHHHHHHhhccCCCccEEEEc-CCchhhHHHHHHcCCccEEEecchhHHHH
Q 011724 85 PLNFD----RSLNHDQFMEC-LLHVFSAHVDELVGNLIQLNPEMNCLVTD-TFFVWSSMIAKKYNLVNISFWTEPALVLT 158 (478)
Q Consensus 85 ~~~~~----~~~~~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~pD~vi~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~ 158 (478)
+.... ........+.. +.......+..+.+.+++ .+||+||+| ...+++..+|+++|||++.+.+.......
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~ 155 (415)
T 3rsc_A 78 IDADAAEVFGSDDLGVRPHLMYLRENVSVLRATAEALDG--DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH 155 (415)
T ss_dssp TTCCHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHSS--SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS
T ss_pred cccccchhhccccHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc
Confidence 32110 00011111222 223333344555555554 689999999 77789999999999999998754321000
Q ss_pred HHHhhhhhhhcCCCCCCCCCCCccccCCCCCCCCccccchhhhhcCCchHHHHHHHHHh-------hhhcc-ccEEEecC
Q 011724 159 LYYHMDLLRSHGHFASTDNREDTIDYIPGVRAIERKDLMSYLQATDTSTVVHRIIQKAF-------EDVKR-VDFILCNT 230 (478)
Q Consensus 159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~l~~~ 230 (478)
... .+..... +.+..+ . ....+ ......+...+ ..... .+..++..
T Consensus 156 ~~~-~~~~~~~--------------~~~~~p-~----~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~ 209 (415)
T 3rsc_A 156 YSF-SQDMVTL--------------AGTIDP-L----DLPVF------RDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFV 209 (415)
T ss_dssp CCH-HHHHHHH--------------HTCCCG-G----GCHHH------HHHHHHHHHHTTCCCCHHHHHTCCCSEEEESS
T ss_pred ccc-ccccccc--------------cccCCh-h----hHHHH------HHHHHHHHHHcCCCCChhhhhcCCCCeEEEEc
Confidence 000 0000000 000000 0 00000 00011111111 01111 26667666
Q ss_pred hhhhcHHHHHHHHhcCC--ccccccCCCCCCCCCCCCCCCCChhhHhHhhcCCCCCceEEEEecccccCCHHHHHHHHHH
Q 011724 231 VHELESETISALHQKQP--TYAIGPIFPAGFTKSLVPTSLWSESECTQWLNTKPRGSVLYVSFGSYAHASKNDIVEIALG 308 (478)
Q Consensus 231 ~~~le~~~~~~~~~~~p--~~~vGp~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~~~a 308 (478)
.+.++ .+...++ +.++||+..... +..+|....+++++||+++||......+.+..++++
T Consensus 210 ~~~~~-----~~~~~~~~~~~~vGp~~~~~~-------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~a 271 (415)
T 3rsc_A 210 PKAFQ-----IAGDTFDDRFVFVGPCFDDRR-------------FLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARA 271 (415)
T ss_dssp CTTTS-----TTGGGCCTTEEECCCCCCCCG-------------GGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHH
T ss_pred CcccC-----CCcccCCCceEEeCCCCCCcc-------------cCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHH
Confidence 66555 3344444 889999875321 122354444567899999999987777889999999
Q ss_pred HhhCCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChHhhhhccCcceeeeccCchhhHHHHhcCcceec
Q 011724 309 LLLSEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQIDVISHSAIGGFLTHCGWNSIQESIWCSVPLLC 388 (478)
Q Consensus 309 l~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~~vL~~~~v~~~ItHGG~~s~~Eal~~GvP~l~ 388 (478)
+++.+.+++|.++.+ ...+.+. . .++|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|+
T Consensus 272 l~~~~~~~v~~~g~~--------~~~~~l~-~--~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~ 338 (415)
T 3rsc_A 272 FDGQPWHVVMTLGGQ--------VDPAALG-D--LPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVV 338 (415)
T ss_dssp HTTSSCEEEEECTTT--------SCGGGGC-C--CCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEE
T ss_pred HhcCCcEEEEEeCCC--------CChHHhc-C--CCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEE
Confidence 999999999988754 1112222 2 6789999999999999999999 9999999999999999999999
Q ss_pred cCcccchhHHHHHhhc----------ccCHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 011724 389 FPLLTDQFTNRKLVKS----------SITKEEVSEKINRLMSGKSSDELRKNIKEVRKKLENALSADGSSQKNFNQFIND 458 (478)
Q Consensus 389 ~P~~~DQ~~na~rv~~----------~~t~~~l~~~v~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~i~~ 458 (478)
+|...||+.||.++++ .++.++|.++|.++|+ |++++++++++++.+.+ +++..+ +.+.|++
T Consensus 339 ~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~----~~~~~~-~~~~i~~ 410 (415)
T 3rsc_A 339 VPQSFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAVAA---DPALLARVEAMRGHVRR----AGGAAR-AADAVEA 410 (415)
T ss_dssp CCCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHH----SCHHHH-HHHHHHH
T ss_pred eCCcchHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHh----cCHHHH-HHHHHHH
Confidence 9999999999999998 5689999999999999 89999999999999987 344444 4444444
Q ss_pred H
Q 011724 459 V 459 (478)
Q Consensus 459 ~ 459 (478)
+
T Consensus 411 ~ 411 (415)
T 3rsc_A 411 Y 411 (415)
T ss_dssp H
T ss_pred H
Confidence 3
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=1.5e-37 Score=313.94 Aligned_cols=374 Identities=15% Similarity=0.180 Sum_probs=251.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCCCCC
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLPLN 87 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 87 (478)
+|+||+|++.++.||++|+++||++|+++||+|+|++++.+.+.++ .. ++.|..++...+..
T Consensus 3 ~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~---~~---------------G~~~~~~~~~~~~~ 64 (402)
T 3ia7_A 3 RQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVK---AA---------------GAEVVLYKSEFDTF 64 (402)
T ss_dssp CCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHH---HT---------------TCEEEECCCGGGTS
T ss_pred CCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHH---Hc---------------CCEEEecccccccc
Confidence 3579999999999999999999999999999999999999888887 56 78888877432211
Q ss_pred C----CCCCCHHHHHHH-HHHHhhHHHHHHHHHhhccCCCccEEEEc-CCchhhHHHHHHcCCccEEEecchhHHHHHHH
Q 011724 88 F----DRSLNHDQFMEC-LLHVFSAHVDELVGNLIQLNPEMNCLVTD-TFFVWSSMIAKKYNLVNISFWTEPALVLTLYY 161 (478)
Q Consensus 88 ~----~~~~~~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~pD~vi~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 161 (478)
. .........+.. +.......+..+.+.++. .+||+||+| .+..++..+|+++|||+|.+.++.........
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~ 142 (402)
T 3ia7_A 65 HVPEVVKQEDAETQLHLVYVRENVAILRAAEEALGD--NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSL 142 (402)
T ss_dssp SSSSSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHTT--CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCH
T ss_pred cccccccccchHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccc
Confidence 1 111233333333 333344445556565554 789999999 77789999999999999998754332100000
Q ss_pred hhhhhhhcCCCCCCCCCCCccccCCCCCCCCccccchhhhhcCCchHHHHHHHHHhhhhccc-cEEEecChhhhcHHHHH
Q 011724 162 HMDLLRSHGHFASTDNREDTIDYIPGVRAIERKDLMSYLQATDTSTVVHRIIQKAFEDVKRV-DFILCNTVHELESETIS 240 (478)
Q Consensus 162 ~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~le~~~~~ 240 (478)
.+.....+. ...|.........+..+......... .. ...... +..+....++++
T Consensus 143 -~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~g~~~~-~~------~~~~~~~~~~l~~~~~~~~----- 198 (402)
T 3ia7_A 143 -FKELWKSNG-----------QRHPADVEAVHSVLVDLLGKYGVDTP-VK------EYWDEIEGLTIVFLPKSFQ----- 198 (402)
T ss_dssp -HHHHHHHHT-----------CCCGGGSHHHHHHHHHHHHTTTCCSC-HH------HHHTCCCSCEEESSCGGGS-----
T ss_pred -ccccccccc-----------ccChhhHHHHHHHHHHHHHHcCCCCC-hh------hhhcCCCCeEEEEcChHhC-----
Confidence 000000000 00000000000000000000000000 00 001111 556666666554
Q ss_pred HHHhcCC--ccccccCCCCCCCCCCCCCCCCChhhHhHhhcCCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEE
Q 011724 241 ALHQKQP--TYAIGPIFPAGFTKSLVPTSLWSESECTQWLNTKPRGSVLYVSFGSYAHASKNDIVEIALGLLLSEVSFVW 318 (478)
Q Consensus 241 ~~~~~~p--~~~vGp~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~ 318 (478)
.+...++ ++++||+..... +..+|....+++++||+++||......+.+..+++++++.+.++++
T Consensus 199 ~~~~~~~~~~~~vGp~~~~~~-------------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (402)
T 3ia7_A 199 PFAETFDERFAFVGPTLTGRD-------------GQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVM 265 (402)
T ss_dssp TTGGGCCTTEEECCCCCCC-----------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEE
T ss_pred CccccCCCCeEEeCCCCCCcc-------------cCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEE
Confidence 3344444 899999875321 1223444445678999999999877778899999999999999988
Q ss_pred EECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChHhhhhccCcceeeeccCchhhHHHHhcCcceeccCc-ccchhH
Q 011724 319 VLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQIDVISHSAIGGFLTHCGWNSIQESIWCSVPLLCFPL-LTDQFT 397 (478)
Q Consensus 319 ~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~~vL~~~~v~~~ItHGG~~s~~Eal~~GvP~l~~P~-~~DQ~~ 397 (478)
.++.+ ...+.+. . .++|+.+.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|. ..||+.
T Consensus 266 ~~g~~--------~~~~~~~-~--~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~ 332 (402)
T 3ia7_A 266 AIGGF--------LDPAVLG-P--LPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAP 332 (402)
T ss_dssp ECCTT--------SCGGGGC-S--CCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHH
T ss_pred EeCCc--------CChhhhC-C--CCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHH
Confidence 88754 1112222 2 6789999999999999999999 9999999999999999999999999 999999
Q ss_pred HHHHhhc----------ccCHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 011724 398 NRKLVKS----------SITKEEVSEKINRLMSGKSSDELRKNIKEVRKKLENALSADGSSQKNFNQFINDV 459 (478)
Q Consensus 398 na~rv~~----------~~t~~~l~~~v~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~i~~~ 459 (478)
||.++++ .+++++|.+++.++|+ |++++++++++++.+.+ ++++...+ +.|+++
T Consensus 333 ~a~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~---~~~~~~~~~~~~~~~~~----~~~~~~~~-~~i~~~ 396 (402)
T 3ia7_A 333 SAERVIELGLGSVLRPDQLEPASIREAVERLAA---DSAVRERVRRMQRDILS----SGGPARAA-DEVEAY 396 (402)
T ss_dssp HHHHHHHTTSEEECCGGGCSHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHT----SCHHHHHH-HHHHHH
T ss_pred HHHHHHHcCCEEEccCCCCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHhh----CChHHHHH-HHHHHH
Confidence 9999988 4589999999999999 89999999999999875 34444444 444444
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=8.7e-38 Score=316.64 Aligned_cols=354 Identities=12% Similarity=0.065 Sum_probs=241.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCCCCC--
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLPLN-- 87 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-- 87 (478)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.++ .. ++.|..++......
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~---~~---------------g~~~~~l~~~~~~~~~ 62 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCA---EV---------------GVPMVPVGRAVRAGAR 62 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHH---HT---------------TCCEEECSSCSSGGGS
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHH---Hc---------------CCceeecCCCHHHHhc
Confidence 79999999999999999999999999999999999999999998 66 78888876432110
Q ss_pred --CCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCchhh---HHHHHHcCCccEEEecchhHHHHHHHh
Q 011724 88 --FDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFFVWS---SMIAKKYNLVNISFWTEPALVLTLYYH 162 (478)
Q Consensus 88 --~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~~ 162 (478)
.......... +.......++++.+.+ .+||+||+|.....+ ..+|+.+|||++.+..++....
T Consensus 63 ~~~~~~~~~~~~---~~~~~~~~~~~l~~~~----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~----- 130 (404)
T 3h4t_A 63 EPGELPPGAAEV---VTEVVAEWFDKVPAAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLP----- 130 (404)
T ss_dssp CTTCCCTTCGGG---HHHHHHHHHHHHHHHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSG-----
T ss_pred cccCCHHHHHHH---HHHHHHHHHHHHHHHh----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCC-----
Confidence 0001111111 1122223333333333 359999999655443 7899999999999887654210
Q ss_pred hhhhhhcCCCCCCCCCCCccccCCCCCCCCccccchhhhhc--CCchHHHHHHHHHhhhh--------ccccEEEecChh
Q 011724 163 MDLLRSHGHFASTDNREDTIDYIPGVRAIERKDLMSYLQAT--DTSTVVHRIIQKAFEDV--------KRVDFILCNTVH 232 (478)
Q Consensus 163 ~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~ 232 (478)
.+.. +......... .......+........- ...+..+.+..+
T Consensus 131 ----------------------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~ 183 (404)
T 3h4t_A 131 ----------------------SEQS-----QAERDMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADP 183 (404)
T ss_dssp ----------------------GGSC-----HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCT
T ss_pred ----------------------ChhH-----HHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCc
Confidence 0000 0000000000 00000001111110000 011223445555
Q ss_pred hhcHHHHHHHHhcCC-ccccccCCCCCCCCCCCCCCCCChhhHhHhhcCCCCCceEEEEecccccCCHHHHHHHHHHHhh
Q 011724 233 ELESETISALHQKQP-TYAIGPIFPAGFTKSLVPTSLWSESECTQWLNTKPRGSVLYVSFGSYAHASKNDIVEIALGLLL 311 (478)
Q Consensus 233 ~le~~~~~~~~~~~p-~~~vGp~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~~~al~~ 311 (478)
.+.+. ++..+ ++++|+++.+.. .++ ++++.+|++.. +++|||++||... ..+.+..+++++++
T Consensus 184 ~l~p~-----~~~~~~~~~~G~~~~~~~------~~~--~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~ 247 (404)
T 3h4t_A 184 VLSPL-----RPTDLGTVQTGAWILPDQ------RPL--SAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRA 247 (404)
T ss_dssp TTSCC-----CTTCCSCCBCCCCCCCCC------CCC--CHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHH
T ss_pred ceeCC-----CCCCCCeEEeCccccCCC------CCC--CHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHh
Confidence 44322 22224 889998876432 235 78899999753 4689999999987 77789999999999
Q ss_pred CCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChHhhhhccCcceeeeccCchhhHHHHhcCcceeccCc
Q 011724 312 SEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQIDVISHSAIGGFLTHCGWNSIQESIWCSVPLLCFPL 391 (478)
Q Consensus 312 ~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~~vL~~~~v~~~ItHGG~~s~~Eal~~GvP~l~~P~ 391 (478)
.+.++||+++.. ..+.+ . .++|+.+.+|+||.++|+++++ ||||||.||+.||+++|+|+|++|+
T Consensus 248 ~~~~vv~~~g~~-----~~~~~------~--~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~ 312 (404)
T 3h4t_A 248 QGRRVVLSSGWA-----GLGRI------D--EGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQ 312 (404)
T ss_dssp TTCCEEEECTTT-----TCCCS------S--CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCC
T ss_pred CCCEEEEEeCCc-----ccccc------c--CCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCC
Confidence 999999998755 11111 1 5789999999999999999998 9999999999999999999999999
Q ss_pred ccchhHHHHHhhc----------ccCHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 011724 392 LTDQFTNRKLVKS----------SITKEEVSEKINRLMSGKSSDELRKNIKEVRKKLENALSADGSSQKNFNQFINDVQF 461 (478)
Q Consensus 392 ~~DQ~~na~rv~~----------~~t~~~l~~~v~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~i~~~~~ 461 (478)
..||+.||.++++ .++.++|.++|+++++ ++|+++++++++.+++ .+.+.+.+.|+++..
T Consensus 313 ~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~----~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 313 KADQPYYAGRVADLGVGVAHDGPTPTVESLSAALATALT----PGIRARAAAVAGTIRT------DGTTVAAKLLLEAIS 382 (404)
T ss_dssp STTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTS----HHHHHHHHHHHTTCCC------CHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHHHHhC----HHHHHHHHHHHHHHhh------hHHHHHHHHHHHHHh
Confidence 9999999999998 4689999999999994 6899999999998853 233445555555443
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.3e-36 Score=311.71 Aligned_cols=366 Identities=12% Similarity=0.159 Sum_probs=236.9
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCCC
Q 011724 6 KKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLP 85 (478)
Q Consensus 6 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 85 (478)
..+||||+|++.++.||++|+++||++|+++||+|+|++++.+.+.++ .. ++.|+.++....
T Consensus 17 ~~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~---~~---------------G~~~~~i~~~~~ 78 (441)
T 2yjn_A 17 RGSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDIT---AA---------------GLTAVPVGTDVD 78 (441)
T ss_dssp --CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHH---TT---------------TCCEEECSCCCC
T ss_pred cCCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHH---hC---------------CCceeecCCccc
Confidence 346799999999999999999999999999999999999999888887 55 788888875421
Q ss_pred C-C---------------CC-----CC-CCHHHH---HHHHHHHhh-----H-HHHHHHHHhhccCCCccEEEEcCCchh
Q 011724 86 L-N---------------FD-----RS-LNHDQF---MECLLHVFS-----A-HVDELVGNLIQLNPEMNCLVTDTFFVW 134 (478)
Q Consensus 86 ~-~---------------~~-----~~-~~~~~~---~~~~~~~~~-----~-~~~~ll~~l~~~~~~pD~vi~D~~~~~ 134 (478)
. . .+ .. .....+ ...+...+. . .+.++++.+++ .+||+||+|.+..+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~ 156 (441)
T 2yjn_A 79 LVDFMTHAGHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK--WRPDLVIWEPLTFA 156 (441)
T ss_dssp HHHHHHHTTHHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH--HCCSEEEECTTCTH
T ss_pred hHHHhhhhhcccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh--cCCCEEEecCcchh
Confidence 0 0 00 00 011111 111111111 2 55566555554 57999999997789
Q ss_pred hHHHHHHcCCccEEEecchhHHHHHHHhhhhhhhcCCCCCCCCCCCccccCCCCCCCCccccchhhhhcCCchHHHHHHH
Q 011724 135 SSMIAKKYNLVNISFWTEPALVLTLYYHMDLLRSHGHFASTDNREDTIDYIPGVRAIERKDLMSYLQATDTSTVVHRIIQ 214 (478)
Q Consensus 135 ~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (478)
+..+|+.+|||+|.+..++.........+... ..+.|... .... .......+.
T Consensus 157 ~~~aA~~lgiP~v~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~--~~~~----------~~~~l~~~~ 209 (441)
T 2yjn_A 157 APIAAAVTGTPHARLLWGPDITTRARQNFLGL---------------LPDQPEEH--REDP----------LAEWLTWTL 209 (441)
T ss_dssp HHHHHHHHTCCEEEECSSCCHHHHHHHHHHHH---------------GGGSCTTT--CCCH----------HHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEecCCCcchhhhhhhhhh---------------cccccccc--ccch----------HHHHHHHHH
Confidence 99999999999999965443211111000000 00111100 0000 001111111
Q ss_pred HHhhh------hccccEEEecChhhhcHHHHHHHHhcC--CccccccCCCCCCCCCCCCCCCCChhhHhHhhcCCCCCce
Q 011724 215 KAFED------VKRVDFILCNTVHELESETISALHQKQ--PTYAIGPIFPAGFTKSLVPTSLWSESECTQWLNTKPRGSV 286 (478)
Q Consensus 215 ~~~~~------~~~~~~~l~~~~~~le~~~~~~~~~~~--p~~~vGp~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~ 286 (478)
..+.. +...+..+....+.+++ +.... |+.++++. . +.++.+|++..+++++
T Consensus 210 ~~~g~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~---~------------~~~~~~~l~~~~~~~~ 269 (441)
T 2yjn_A 210 EKYGGPAFDEEVVVGQWTIDPAPAAIRL-----DTGLKTVGMRYVDYN---G------------PSVVPEWLHDEPERRR 269 (441)
T ss_dssp HHTTCCCCCGGGTSCSSEEECSCGGGSC-----CCCCCEEECCCCCCC---S------------SCCCCGGGSSCCSSCE
T ss_pred HHcCCCCCCccccCCCeEEEecCccccC-----CCCCCCCceeeeCCC---C------------CcccchHhhcCCCCCE
Confidence 11111 01133455554444431 11100 12232110 0 2335578876667789
Q ss_pred EEEEecccccC---CHHHHHHHHHHHhhCCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChHhhhhccC
Q 011724 287 LYVSFGSYAHA---SKNDIVEIALGLLLSEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQIDVISHSA 363 (478)
Q Consensus 287 Vyvs~Gs~~~~---~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~~vL~~~~ 363 (478)
|||++||.... ..+.+..+++++++.+.++||++++. .. +.+. . .++|+.+.+|+||.++|+.++
T Consensus 270 v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~-----~~----~~l~-~--~~~~v~~~~~~~~~~ll~~ad 337 (441)
T 2yjn_A 270 VCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQ-----QL----EGVA-N--IPDNVRTVGFVPMHALLPTCA 337 (441)
T ss_dssp EEEEC----------CCSTTTTHHHHHTSSSEEEECCCTT-----TT----SSCS-S--CCSSEEECCSCCHHHHGGGCS
T ss_pred EEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCc-----ch----hhhc-c--CCCCEEEecCCCHHHHHhhCC
Confidence 99999999753 34567788999998999999988754 11 1111 2 578999999999999999999
Q ss_pred cceeeeccCchhhHHHHhcCcceeccCcccchhHHHHHhhc----------ccCHHHHHHHHHHHhCCCChHHHHHHHHH
Q 011724 364 IGGFLTHCGWNSIQESIWCSVPLLCFPLLTDQFTNRKLVKS----------SITKEEVSEKINRLMSGKSSDELRKNIKE 433 (478)
Q Consensus 364 v~~~ItHGG~~s~~Eal~~GvP~l~~P~~~DQ~~na~rv~~----------~~t~~~l~~~v~~ll~~~~~~~~r~~a~~ 433 (478)
+ ||||||.||++||+++|||+|++|...||+.||.++++ .++.++|.++|.++++ |+++++++++
T Consensus 338 ~--~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~---~~~~~~~~~~ 412 (441)
T 2yjn_A 338 A--TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRVLD---DPAHRAGAAR 412 (441)
T ss_dssp E--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHHH---CHHHHHHHHH
T ss_pred E--EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 8 99999999999999999999999999999999999988 4689999999999998 8999999999
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHH
Q 011724 434 VRKKLENALSADGSSQKNFNQFINDVQ 460 (478)
Q Consensus 434 l~~~~~~a~~~gg~~~~~~~~~i~~~~ 460 (478)
+++.+++ ..+.. .+.+.|+++.
T Consensus 413 ~~~~~~~----~~~~~-~~~~~i~~~~ 434 (441)
T 2yjn_A 413 MRDDMLA----EPSPA-EVVGICEELA 434 (441)
T ss_dssp HHHHHHT----SCCHH-HHHHHHHHHH
T ss_pred HHHHHHc----CCCHH-HHHHHHHHHH
Confidence 9999876 34444 4445555543
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=7.2e-36 Score=304.93 Aligned_cols=355 Identities=14% Similarity=0.155 Sum_probs=239.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCCCC
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLPL 86 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 86 (478)
++||||+|++.++.||++|+++||++|+++||+|+++++....+.+. .. ++.++.++...+.
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~---~~---------------g~~~~~~~~~~~~ 66 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVA---AT---------------GPRPVLYHSTLPG 66 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHH---TT---------------SCEEEECCCCSCC
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHH---hC---------------CCEEEEcCCcCcc
Confidence 44689999999999999999999999999999999999998877776 55 7888888764332
Q ss_pred CCCC----CCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCchhhHHHHHHcCCccEEEecchhHHHHHHHh
Q 011724 87 NFDR----SLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFFVWSSMIAKKYNLVNISFWTEPALVLTLYYH 162 (478)
Q Consensus 87 ~~~~----~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 162 (478)
.... .......+..+...+...+..+.+.++. .+||+||+|.+.+++..+|+.+|||+|.+++...........
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~ 144 (430)
T 2iyf_A 67 PDADPEAWGSTLLDNVEPFLNDAIQALPQLADAYAD--DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEE 144 (430)
T ss_dssp TTSCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTT--SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHH
T ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhc--cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccc
Confidence 2111 1233333333333333344455555554 679999999877889999999999999998654310000000
Q ss_pred hhhhhhcCCCCCCCCCCCccccCCCCCCCCccccchhhhhcCCchHHHHHHHHHh-------hhhccccEEEecChhhhc
Q 011724 163 MDLLRSHGHFASTDNREDTIDYIPGVRAIERKDLMSYLQATDTSTVVHRIIQKAF-------EDVKRVDFILCNTVHELE 235 (478)
Q Consensus 163 ~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~~~~le 235 (478)
+.. .. .......++. ..+ ......+...+ +.....+.+++++.+.++
T Consensus 145 ~~~-~~----------~~~~~~~~~~--------~~~-------~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~ 198 (430)
T 2iyf_A 145 VAE-PM----------WREPRQTERG--------RAY-------YARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQ 198 (430)
T ss_dssp THH-HH----------HHHHHHSHHH--------HHH-------HHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGS
T ss_pred ccc-ch----------hhhhccchHH--------HHH-------HHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhC
Confidence 000 00 0000000000 000 00011111110 011246788999888777
Q ss_pred HHHHHHHHhcC-C-ccccccCCCCCCCCCCCCCCCCChhhHhHhhcCCCCCceEEEEecccccCCHHHHHHHHHHHhhC-
Q 011724 236 SETISALHQKQ-P-TYAIGPIFPAGFTKSLVPTSLWSESECTQWLNTKPRGSVLYVSFGSYAHASKNDIVEIALGLLLS- 312 (478)
Q Consensus 236 ~~~~~~~~~~~-p-~~~vGp~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~~~al~~~- 312 (478)
+.. .... . ++++||.+.... +..+|....+++++||+++||......+.+..+++++++.
T Consensus 199 ~~~----~~~~~~~v~~vG~~~~~~~-------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~ 261 (430)
T 2iyf_A 199 PHA----DRVDEDVYTFVGACQGDRA-------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLP 261 (430)
T ss_dssp TTG----GGSCTTTEEECCCCC------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCT
T ss_pred CCc----ccCCCccEEEeCCcCCCCC-------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCC
Confidence 431 1222 3 789998664211 0113444345677999999999855677888999999885
Q ss_pred CCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChHhhhhccCcceeeeccCchhhHHHHhcCcceeccCcc
Q 011724 313 EVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQIDVISHSAIGGFLTHCGWNSIQESIWCSVPLLCFPLL 392 (478)
Q Consensus 313 ~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~~vL~~~~v~~~ItHGG~~s~~Eal~~GvP~l~~P~~ 392 (478)
+.+++|.++.+ ...+.+ .. .++|+.+.+|+||.++|+++++ ||||||+||+.||+++|+|+|++|..
T Consensus 262 ~~~~~~~~G~~--------~~~~~l-~~--~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~ 328 (430)
T 2iyf_A 262 GWHLVLQIGRK--------VTPAEL-GE--LPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQA 328 (430)
T ss_dssp TEEEEEECC-----------CGGGG-CS--CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred CeEEEEEeCCC--------CChHHh-cc--CCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCc
Confidence 78888888754 111122 12 5789999999999999999999 99999999999999999999999999
Q ss_pred cchhHHHHHhhc----------ccCHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHH
Q 011724 393 TDQFTNRKLVKS----------SITKEEVSEKINRLMSGKSSDELRKNIKEVRKKLEN 440 (478)
Q Consensus 393 ~DQ~~na~rv~~----------~~t~~~l~~~v~~ll~~~~~~~~r~~a~~l~~~~~~ 440 (478)
.||..||.++++ .++.++|.++|.++++ |+++++++.++++++.+
T Consensus 329 ~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 329 VDQFGNADMLQGLGVARKLATEEATADLLRETALALVD---DPEVARRLRRIQAEMAQ 383 (430)
T ss_dssp HHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHh
Confidence 999999999988 3488999999999998 89999999999999876
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=6.8e-36 Score=300.55 Aligned_cols=346 Identities=10% Similarity=0.086 Sum_probs=240.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCCC----
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLP---- 85 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---- 85 (478)
|||++++.++.||++|+++||++|+++||+|++++++.+.+.++ .. ++.++.++....
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~---~~---------------g~~~~~~~~~~~~~~~ 62 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVT---GV---------------GLPAVATTDLPIRHFI 62 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH---HT---------------TCCEEESCSSCHHHHH
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHH---hC---------------CCEEEEeCCcchHHHH
Confidence 79999999999999999999999999999999999998877776 55 677777764320
Q ss_pred --------CCCCCCCCHHHHH-HH-HHHHhhHHHHHHHHHhhccCCCccEEEEcCCchhhHHHHHHcCCccEEEecchhH
Q 011724 86 --------LNFDRSLNHDQFM-EC-LLHVFSAHVDELVGNLIQLNPEMNCLVTDTFFVWSSMIAKKYNLVNISFWTEPAL 155 (478)
Q Consensus 86 --------~~~~~~~~~~~~~-~~-~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 155 (478)
...+........+ .. +...+...+.++.+.+++ .+||+||+|.+..++..+|+.+|||+|.+...+..
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~ 140 (384)
T 2p6p_A 63 TTDREGRPEAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRA--WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD 140 (384)
T ss_dssp HBCTTSCBCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC
T ss_pred hhhcccCccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc--cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc
Confidence 0000000111111 11 112222334445444443 56999999987888899999999999987532110
Q ss_pred HHHHHHhhhhhhhcCCCCCCCCCCCccccCCCCCCCCccccchhhhhcCCchHHHHHHHHHhhh--hccccEEEecChhh
Q 011724 156 VLTLYYHMDLLRSHGHFASTDNREDTIDYIPGVRAIERKDLMSYLQATDTSTVVHRIIQKAFED--VKRVDFILCNTVHE 233 (478)
Q Consensus 156 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~ 233 (478)
..++ .... ....+.+...+.. ....+.++.++.+.
T Consensus 141 -----------------------------~~~~--------~~~~------~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 177 (384)
T 2p6p_A 141 -----------------------------ADGI--------HPGA------DAELRPELSELGLERLPAPDLFIDICPPS 177 (384)
T ss_dssp -----------------------------CTTT--------HHHH------HHHTHHHHHHTTCSSCCCCSEEEECSCGG
T ss_pred -----------------------------cchh--------hHHH------HHHHHHHHHHcCCCCCCCCCeEEEECCHH
Confidence 0000 0000 0011111111111 11156788888887
Q ss_pred hcHHHHHHHHhcC-C-ccccccCCCCCCCCCCCCCCCCChhhHhHhhcCCCCCceEEEEecccccC-----CHHHHHHHH
Q 011724 234 LESETISALHQKQ-P-TYAIGPIFPAGFTKSLVPTSLWSESECTQWLNTKPRGSVLYVSFGSYAHA-----SKNDIVEIA 306 (478)
Q Consensus 234 le~~~~~~~~~~~-p-~~~vGp~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Vyvs~Gs~~~~-----~~~~~~~~~ 306 (478)
++++ .+.. + +.+++. . . +.++.+|++..+++++||+++||.... ..+.+..++
T Consensus 178 ~~~~-----~~~~~~~~~~~~~-~--~------------~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~ 237 (384)
T 2p6p_A 178 LRPA-----NAAPARMMRHVAT-S--R------------QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLA 237 (384)
T ss_dssp GSCT-----TSCCCEECCCCCC-C--C------------CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHH
T ss_pred HCCC-----CCCCCCceEecCC-C--C------------CCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHH
Confidence 7632 1111 1 445531 1 1 223456887655667999999999864 457788999
Q ss_pred HHHhhCCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChHhhhhccCcceeeeccCchhhHHHHhcCcce
Q 011724 307 LGLLLSEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQIDVISHSAIGGFLTHCGWNSIQESIWCSVPL 386 (478)
Q Consensus 307 ~al~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~~vL~~~~v~~~ItHGG~~s~~Eal~~GvP~ 386 (478)
+++++.+.+++|++++. ..+.+. . .++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+
T Consensus 238 ~al~~~~~~~~~~~g~~---------~~~~l~-~--~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~ 302 (384)
T 2p6p_A 238 KDLVRWDVELIVAAPDT---------VAEALR-A--EVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQ 302 (384)
T ss_dssp HHHHTTTCEEEEECCHH---------HHHHHH-H--HCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCE
T ss_pred HHHhcCCcEEEEEeCCC---------CHHhhC-C--CCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCE
Confidence 99999999999987633 111222 2 5789999 99999999999998 99999999999999999999
Q ss_pred eccCcccchhHHHHHhhc----------ccCHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 011724 387 LCFPLLTDQFTNRKLVKS----------SITKEEVSEKINRLMSGKSSDELRKNIKEVRKKLENALSADGSSQKNFNQFI 456 (478)
Q Consensus 387 l~~P~~~DQ~~na~rv~~----------~~t~~~l~~~v~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~i 456 (478)
|++|...||+.||.++++ .++.++|.++|+++|+ |++++++++++++++++ ..+ .+.+.+.|
T Consensus 303 v~~p~~~dq~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~----~~~-~~~~~~~i 374 (384)
T 2p6p_A 303 LLIPKGSVLEAPARRVADYGAAIALLPGEDSTEAIADSCQELQA---KDTYARRAQDLSREISG----MPL-PATVVTAL 374 (384)
T ss_dssp EECCCSHHHHHHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHT----SCC-HHHHHHHH
T ss_pred EEccCcccchHHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHh----CCC-HHHHHHHH
Confidence 999999999999999988 3589999999999998 89999999999999986 344 34555555
Q ss_pred HHHHh
Q 011724 457 NDVQF 461 (478)
Q Consensus 457 ~~~~~ 461 (478)
+.+..
T Consensus 375 ~~~~~ 379 (384)
T 2p6p_A 375 EQLAH 379 (384)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 65544
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=1.2e-34 Score=292.85 Aligned_cols=338 Identities=11% Similarity=0.125 Sum_probs=217.1
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCCC
Q 011724 6 KKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLP 85 (478)
Q Consensus 6 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 85 (478)
++.+|||+|++.++.||++|+++||++|+++||+|++++++.+.+.++ .. ++.+..++....
T Consensus 12 ~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~---~~---------------G~~~~~~~~~~~ 73 (398)
T 4fzr_A 12 RGSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVT---GA---------------GLPFAPTCPSLD 73 (398)
T ss_dssp ---CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHH---HT---------------TCCEEEEESSCC
T ss_pred CCCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHH---hC---------------CCeeEecCCccc
Confidence 356799999999999999999999999999999999999998888887 55 666666652100
Q ss_pred -----------CCCCCCCCHHHHH----HHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCchhhHHHHHHcCCccEEEe
Q 011724 86 -----------LNFDRSLNHDQFM----ECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFFVWSSMIAKKYNLVNISFW 150 (478)
Q Consensus 86 -----------~~~~~~~~~~~~~----~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~~~~~~~A~~lgiP~v~~~ 150 (478)
............+ ..+.......+.++.+.+++ .+||+||+|...+++..+|+.+|||+|.+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~~a~~~giP~v~~~ 151 (398)
T 4fzr_A 74 MPEVLSWDREGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER--WKPDLVLTETYSLTGPLVAATLGIPWIEQS 151 (398)
T ss_dssp HHHHHSBCTTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEEC
T ss_pred hHhhhhhhccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCEEEECccccHHHHHHHhhCCCEEEec
Confidence 0000001111111 12222223333444444443 579999999877889999999999999876
Q ss_pred cchhHHHHHHHhhhhhhhcCCCCCCCCCCCccccCCCCCCCCccccchhhhhcCCchHHHHHHHHHhh--hhccccEEEe
Q 011724 151 TEPALVLTLYYHMDLLRSHGHFASTDNREDTIDYIPGVRAIERKDLMSYLQATDTSTVVHRIIQKAFE--DVKRVDFILC 228 (478)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~ 228 (478)
.+........ + .. ..........+. .....+..+.
T Consensus 152 ~~~~~~~~~~-------------------------~-----------~~-------~~~l~~~~~~~~~~~~~~~~~~~~ 188 (398)
T 4fzr_A 152 IRLASPELIK-------------------------S-----------AG-------VGELAPELAELGLTDFPDPLLSID 188 (398)
T ss_dssp CSSCCCHHHH-------------------------H-----------HH-------HHHTHHHHHTTTCSSCCCCSEEEE
T ss_pred cCCCCchhhh-------------------------H-----------HH-------HHHHHHHHHHcCCCCCCCCCeEEE
Confidence 4421100000 0 00 000000001000 1112244555
Q ss_pred cChhhhcHHHHHHHHhcCCccccccCCCCCCCCCCCCCCCCChhhHhHhhcCCCCCceEEEEecccccC--------CHH
Q 011724 229 NTVHELESETISALHQKQPTYAIGPIFPAGFTKSLVPTSLWSESECTQWLNTKPRGSVLYVSFGSYAHA--------SKN 300 (478)
Q Consensus 229 ~~~~~le~~~~~~~~~~~p~~~vGp~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Vyvs~Gs~~~~--------~~~ 300 (478)
.....++... .....|+.++++... ..++.+|+...+++++||+++||.... ..+
T Consensus 189 ~~~~~~~~~~---~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~ 251 (398)
T 4fzr_A 189 VCPPSMEAQP---KPGTTKMRYVPYNGR--------------NDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLS 251 (398)
T ss_dssp CSCGGGC-------CCCEECCCCCCCCS--------------SCCCCHHHHSCCSSCEEECC----------------CC
T ss_pred eCChhhCCCC---CCCCCCeeeeCCCCC--------------CCCCchhhhcCCCCCEEEEEccCcccccccccccchHH
Confidence 5544444220 011112333332100 223446766656678999999999743 345
Q ss_pred HHHHHHHHHhhCCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChHhhhhccCcceeeeccCchhhHHHH
Q 011724 301 DIVEIALGLLLSEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQIDVISHSAIGGFLTHCGWNSIQESI 380 (478)
Q Consensus 301 ~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~~vL~~~~v~~~ItHGG~~s~~Eal 380 (478)
.+..+++++++.+.+++|+.++. . .+.+. . .++|+.+.+|+|+.++|+++++ ||||||.||+.||+
T Consensus 252 ~~~~~~~al~~~~~~~v~~~~~~--------~-~~~l~-~--~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~ 317 (398)
T 4fzr_A 252 LLQALSQELPKLGFEVVVAVSDK--------L-AQTLQ-P--LPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCL 317 (398)
T ss_dssp SHHHHHHHGGGGTCEEEECCCC--------------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEeCCc--------c-hhhhc-c--CCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHH
Confidence 68899999999999999987755 1 12222 2 6889999999999999999999 99999999999999
Q ss_pred hcCcceeccCcccchhHHHHHhhc----------ccCHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHH
Q 011724 381 WCSVPLLCFPLLTDQFTNRKLVKS----------SITKEEVSEKINRLMSGKSSDELRKNIKEVRKKLEN 440 (478)
Q Consensus 381 ~~GvP~l~~P~~~DQ~~na~rv~~----------~~t~~~l~~~v~~ll~~~~~~~~r~~a~~l~~~~~~ 440 (478)
++|+|+|++|...||+.||.++++ .+++++|.++|.++|+ |+++++++++.++++.+
T Consensus 318 ~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~---~~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 318 SEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIRD---DSSYVGNARRLAAEMAT 384 (398)
T ss_dssp HTTCCEEECCCSGGGHHHHHHHHHTTSEEECC-------CHHHHHHHHHH---CTHHHHHHHHHHHHHTT
T ss_pred HhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHc
Confidence 999999999999999999999988 4478999999999999 89999999999999875
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=1.1e-33 Score=285.99 Aligned_cols=342 Identities=13% Similarity=0.109 Sum_probs=227.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCCC-
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLP- 85 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~- 85 (478)
.++|||+|++.++.||++|+++||++|+++||+|+++++ .+.+.++ .. ++.+..++....
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~---~~---------------G~~~~~~~~~~~~ 78 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAA---AA---------------GLEVVDVAPDYSA 78 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHH---TT---------------TCEEEESSTTCCH
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHH---hC---------------CCeeEecCCccCH
Confidence 456999999999999999999999999999999999999 8888887 65 788888874310
Q ss_pred --------------------CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCchhhHHHHHHcCCc
Q 011724 86 --------------------LNFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFFVWSSMIAKKYNLV 145 (478)
Q Consensus 86 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~~~~~~~A~~lgiP 145 (478)
............+... ....+.++.+.+++ .+||+||+|...+++..+|+.+|||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~l~~--~~pDlVv~d~~~~~~~~aA~~~giP 153 (398)
T 3oti_A 79 VKVFEQVAKDNPRFAETVATRPAIDLEEWGVQIAAV---NRPLVDGTMALVDD--YRPDLVVYEQGATVGLLAADRAGVP 153 (398)
T ss_dssp HHHHHHHHHHCHHHHHTGGGSCCCSGGGGHHHHHHH---HGGGHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHTCC
T ss_pred HHHhhhcccCCccccccccCChhhhHHHHHHHHHHH---HHHHHHHHHHHHHH--cCCCEEEECchhhHHHHHHHHcCCC
Confidence 0001111122222222 22223333333333 5699999998888899999999999
Q ss_pred cEEEecchhHHHHHHHhhhhhhhcCCCCCCCCCCCccccCCCCCCCCccccchhhhhcCCchHHHHHHHHHhh-hhcccc
Q 011724 146 NISFWTEPALVLTLYYHMDLLRSHGHFASTDNREDTIDYIPGVRAIERKDLMSYLQATDTSTVVHRIIQKAFE-DVKRVD 224 (478)
Q Consensus 146 ~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 224 (478)
+|.+..+... .... ..... ....... ..+. .....+
T Consensus 154 ~v~~~~~~~~-----------------------------~~~~--------~~~~~--~~l~~~~----~~~~~~~~~~~ 190 (398)
T 3oti_A 154 AVQRNQSAWR-----------------------------TRGM--------HRSIA--SFLTDLM----DKHQVSLPEPV 190 (398)
T ss_dssp EEEECCTTCC-----------------------------CTTH--------HHHHH--TTCHHHH----HHTTCCCCCCS
T ss_pred EEEEeccCCC-----------------------------ccch--------hhHHH--HHHHHHH----HHcCCCCCCCC
Confidence 9987533210 0000 00000 0001111 1111 012234
Q ss_pred EEEecChhhhcHHHHHHHHhcCCccccccCCCCCCCCCCCCCCCCChhhHhHhhcCCCCCceEEEEecccccC--CHHHH
Q 011724 225 FILCNTVHELESETISALHQKQPTYAIGPIFPAGFTKSLVPTSLWSESECTQWLNTKPRGSVLYVSFGSYAHA--SKNDI 302 (478)
Q Consensus 225 ~~l~~~~~~le~~~~~~~~~~~p~~~vGp~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Vyvs~Gs~~~~--~~~~~ 302 (478)
..+......+..+. .....|+.++.. .. +....+|+...+++++||+++||.... ..+.+
T Consensus 191 ~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~------------~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~ 252 (398)
T 3oti_A 191 ATIESFPPSLLLEA---EPEGWFMRWVPY---GG------------GAVLGDRLPPVPARPEVAITMGTIELQAFGIGAV 252 (398)
T ss_dssp EEECSSCGGGGTTS---CCCSBCCCCCCC---CC------------CEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGH
T ss_pred eEEEeCCHHHCCCC---CCCCCCccccCC---CC------------CcCCchhhhcCCCCCEEEEEcCCCccccCcHHHH
Confidence 44444444333110 001112222210 00 222345666556678999999999643 66778
Q ss_pred HHHHHHHhhCCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChHhhhhccCcceeeeccCchhhHHHHhc
Q 011724 303 VEIALGLLLSEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQIDVISHSAIGGFLTHCGWNSIQESIWC 382 (478)
Q Consensus 303 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~~vL~~~~v~~~ItHGG~~s~~Eal~~ 382 (478)
..+++++++.+.+++|+.++. ..+.+.+ .++|+.+.+|+|+.++|+++++ ||||||.||+.||+++
T Consensus 253 ~~~~~~l~~~~~~~v~~~g~~---------~~~~l~~---~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~ 318 (398)
T 3oti_A 253 EPIIAAAGEVDADFVLALGDL---------DISPLGT---LPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDA 318 (398)
T ss_dssp HHHHHHHHTSSSEEEEECTTS---------CCGGGCS---CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEECCc---------Chhhhcc---CCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHh
Confidence 999999999999999998755 1122222 6789999999999999999999 9999999999999999
Q ss_pred CcceeccCcccchhHHH--HHhhc----------ccCHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHhcCCChHH
Q 011724 383 SVPLLCFPLLTDQFTNR--KLVKS----------SITKEEVSEKINRLMSGKSSDELRKNIKEVRKKLENALSADGSSQK 450 (478)
Q Consensus 383 GvP~l~~P~~~DQ~~na--~rv~~----------~~t~~~l~~~v~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~ 450 (478)
|+|+|++|...||+.|| .++++ ..+++.|. ++|+ |++++++++++++++.+ ..+ ..
T Consensus 319 G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~----~ll~---~~~~~~~~~~~~~~~~~----~~~-~~ 386 (398)
T 3oti_A 319 GIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR----RLIG---DESLRTAAREVREEMVA----LPT-PA 386 (398)
T ss_dssp TCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH----HHHH---CHHHHHHHHHHHHHHHT----SCC-HH
T ss_pred CCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH----HHHc---CHHHHHHHHHHHHHHHh----CCC-HH
Confidence 99999999999999999 99988 33455554 8998 89999999999999976 344 34
Q ss_pred HHHHHHHHH
Q 011724 451 NFNQFINDV 459 (478)
Q Consensus 451 ~~~~~i~~~ 459 (478)
.+.+.++++
T Consensus 387 ~~~~~l~~l 395 (398)
T 3oti_A 387 ETVRRIVER 395 (398)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 455555554
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=1.3e-32 Score=277.16 Aligned_cols=346 Identities=11% Similarity=0.129 Sum_probs=228.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEc-CCCC---
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATV-SDGL--- 84 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~--- 84 (478)
+|||+|++.++.||++|+++||++|+++||+|++++++.+.+.+. .. ++.+..+ +...
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~---~~---------------g~~~~~~~~~~~~~~ 62 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAH---GA---------------GLTTAGIRGNDRTGD 62 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHH---HB---------------TCEEEEC--------
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHH---hC---------------CCceeeecCCccchh
Confidence 389999999999999999999999999999999999988887777 55 6777766 3211
Q ss_pred -------CCC--CCCCCCHHHHHHHHHHHhhHH-------HHHHHHHhhccCCCccEEEEcCCchhhHHHHHHcCCccEE
Q 011724 85 -------PLN--FDRSLNHDQFMECLLHVFSAH-------VDELVGNLIQLNPEMNCLVTDTFFVWSSMIAKKYNLVNIS 148 (478)
Q Consensus 85 -------~~~--~~~~~~~~~~~~~~~~~~~~~-------~~~ll~~l~~~~~~pD~vi~D~~~~~~~~~A~~lgiP~v~ 148 (478)
+.. .............+....... +.++.+.+++ .+||+||+|...+++..+|+.+|||++.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~PD~Vv~~~~~~~~~~aa~~~giP~v~ 140 (391)
T 3tsa_A 63 TGGTTQLRFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA--WRPSVLLVDVCALIGRVLGGLLDLPVVL 140 (391)
T ss_dssp ------CCSCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHTTCCEEE
T ss_pred hhhhhcccccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh--cCCCEEEeCcchhHHHHHHHHhCCCEEE
Confidence 000 000000011111111111112 4444444443 5699999998778899999999999998
Q ss_pred EecchhHHHHHHHhhhhhhhcCCCCCCCCCCCccccCCCCCCCCccccchhhhhcCCchHHHHHHHHHhh--hhccccEE
Q 011724 149 FWTEPALVLTLYYHMDLLRSHGHFASTDNREDTIDYIPGVRAIERKDLMSYLQATDTSTVVHRIIQKAFE--DVKRVDFI 226 (478)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 226 (478)
+..+... ... ..... ...........+. .....+..
T Consensus 141 ~~~~~~~-----------------------------~~~-------~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 178 (391)
T 3tsa_A 141 HRWGVDP-----------------------------TAG-------PFSDR------AHELLDPVCRHHGLTGLPTPELI 178 (391)
T ss_dssp ECCSCCC-----------------------------TTT-------HHHHH------HHHHHHHHHHHTTSSSSCCCSEE
T ss_pred EecCCcc-----------------------------ccc-------cccch------HHHHHHHHHHHcCCCCCCCCceE
Confidence 7543211 000 00000 0001111111111 11122455
Q ss_pred EecChhhhcHHHHHHHHhcC--CccccccCCCCCCCCCCCCCCCCChhhHhHhhcCCCCCceEEEEeccccc--CC-HHH
Q 011724 227 LCNTVHELESETISALHQKQ--PTYAIGPIFPAGFTKSLVPTSLWSESECTQWLNTKPRGSVLYVSFGSYAH--AS-KND 301 (478)
Q Consensus 227 l~~~~~~le~~~~~~~~~~~--p~~~vGp~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Vyvs~Gs~~~--~~-~~~ 301 (478)
+....++++ .+.... ++.+++ .. . +.....|+...+++++|++++||... .. .++
T Consensus 179 ~~~~~~~~~-----~~~~~~~~~~~~~p-~~--~------------~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~ 238 (391)
T 3tsa_A 179 LDPCPPSLQ-----ASDAPQGAPVQYVP-YN--G------------SGAFPAWGAARTSARRVCICMGRMVLNATGPAPL 238 (391)
T ss_dssp EECSCGGGS-----CTTSCCCEECCCCC-CC--C------------CEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHH
T ss_pred EEecChhhc-----CCCCCccCCeeeec-CC--C------------CcCCCchhhcCCCCCEEEEEcCCCCCcccchHHH
Confidence 555544443 111111 133331 11 0 22234576655667899999999953 33 777
Q ss_pred HHHHHHHHhhC-CCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChHhhhhccCcceeeeccCchhhHHHH
Q 011724 302 IVEIALGLLLS-EVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQIDVISHSAIGGFLTHCGWNSIQESI 380 (478)
Q Consensus 302 ~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~~vL~~~~v~~~ItHGG~~s~~Eal 380 (478)
+..++++ ++. +.+++|+.++. . .+.+. . .++|+.+.+|+|+.++|+++++ ||||||.||+.||+
T Consensus 239 ~~~~~~~-~~~p~~~~v~~~~~~-----~----~~~l~-~--~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~ 303 (391)
T 3tsa_A 239 LRAVAAA-TELPGVEAVIAVPPE-----H----RALLT-D--LPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTAT 303 (391)
T ss_dssp HHHHHHH-HTSTTEEEEEECCGG-----G----GGGCT-T--CCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHH
T ss_pred HHHHHHh-ccCCCeEEEEEECCc-----c----hhhcc-c--CCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHH
Confidence 8888888 877 77888887644 1 12222 2 6789999999999999999999 99999999999999
Q ss_pred hcCcceeccCcccchhHHHHHhhc--------c----cCHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHhcCCCh
Q 011724 381 WCSVPLLCFPLLTDQFTNRKLVKS--------S----ITKEEVSEKINRLMSGKSSDELRKNIKEVRKKLENALSADGSS 448 (478)
Q Consensus 381 ~~GvP~l~~P~~~DQ~~na~rv~~--------~----~t~~~l~~~v~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~ 448 (478)
++|+|+|++|...||+.|+.++++ . .+.++|.+++.++|+ |++++++++++++.+.+ +.+.
T Consensus 304 ~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~---~~~~~~~~~~~~~~~~~----~~~~ 376 (391)
T 3tsa_A 304 RLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLG---DTGFAAAAIKLSDEITA----MPHP 376 (391)
T ss_dssp HTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHT---CTHHHHHHHHHHHHHHT----SCCH
T ss_pred HhCCCEEecCCcccHHHHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHc----CCCH
Confidence 999999999999999999999988 3 578999999999999 89999999999999875 3444
Q ss_pred HHHHHHHHHHH
Q 011724 449 QKNFNQFINDV 459 (478)
Q Consensus 449 ~~~~~~~i~~~ 459 (478)
. .+.+.++.+
T Consensus 377 ~-~~~~~i~~~ 386 (391)
T 3tsa_A 377 A-ALVRTLENT 386 (391)
T ss_dssp H-HHHHHHHHC
T ss_pred H-HHHHHHHHH
Confidence 3 444444443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=5.6e-31 Score=266.92 Aligned_cols=353 Identities=14% Similarity=0.162 Sum_probs=234.1
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCC--
Q 011724 6 KKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDG-- 83 (478)
Q Consensus 6 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-- 83 (478)
+..+|||+|++.++.||++|+++||++|+++||+|++++++.+.+.+. .. ++.+..++..
T Consensus 17 ~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~---~~---------------g~~~~~~~~~~~ 78 (412)
T 3otg_A 17 EGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLR---KL---------------GFEPVATGMPVF 78 (412)
T ss_dssp -CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHH---HT---------------TCEEEECCCCHH
T ss_pred ccceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHH---hc---------------CCceeecCcccc
Confidence 356699999999999999999999999999999999999988777776 55 7888887641
Q ss_pred ---------------CCC-C-CCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCchhhHHHHHHcCCcc
Q 011724 84 ---------------LPL-N-FDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFFVWSSMIAKKYNLVN 146 (478)
Q Consensus 84 ---------------~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~~~~~~~A~~lgiP~ 146 (478)
.+. . ..........+.... ....+..+.+.+++ .+||+||+|....++..+|+.+|||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~l~~--~~pDvVv~~~~~~~~~~aa~~~giP~ 154 (412)
T 3otg_A 79 DGFLAALRIRFDTDSPEGLTPEQLSELPQIVFGRVI--PQRVFDELQPVIER--LRPDLVVQEISNYGAGLAALKAGIPT 154 (412)
T ss_dssp HHHHHHHHHHHSCSCCTTCCHHHHTTSHHHHHHTHH--HHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHTCCE
T ss_pred cchhhhhhhhhcccCCccCChhHhhHHHHHHHhccc--hHHHHHHHHHHHHh--cCCCEEEECchhhHHHHHHHHcCCCE
Confidence 000 0 000011111111110 11122333333333 46999999987788889999999999
Q ss_pred EEEecchhHHHHHHHhhhhhhhcCCCCCCCCCCCccccCCCCCCCCccccchhhhhcCCchHHHHHHHHHhh-------h
Q 011724 147 ISFWTEPALVLTLYYHMDLLRSHGHFASTDNREDTIDYIPGVRAIERKDLMSYLQATDTSTVVHRIIQKAFE-------D 219 (478)
Q Consensus 147 v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 219 (478)
|.+..+... .++. . .. .......+...+. .
T Consensus 155 v~~~~~~~~-----------------------------~~~~--------~---~~---~~~~~~~~~~~~g~~~~~~~~ 191 (412)
T 3otg_A 155 ICHGVGRDT-----------------------------PDDL--------T---RS---IEEEVRGLAQRLGLDLPPGRI 191 (412)
T ss_dssp EEECCSCCC-----------------------------CSHH--------H---HH---HHHHHHHHHHHTTCCCCSSCC
T ss_pred EEecccccC-----------------------------chhh--------h---HH---HHHHHHHHHHHcCCCCCcccc
Confidence 987543211 0000 0 00 0001111111110 0
Q ss_pred hccccEEEecChhhhcHHHHHHHHhcCCccccccCCCCCCCCCCCCCCCCChhhHhHh-hcCCCCCceEEEEecccccCC
Q 011724 220 VKRVDFILCNTVHELESETISALHQKQPTYAIGPIFPAGFTKSLVPTSLWSESECTQW-LNTKPRGSVLYVSFGSYAHAS 298 (478)
Q Consensus 220 ~~~~~~~l~~~~~~le~~~~~~~~~~~p~~~vGp~~~~~~~~~~~~~~l~~~~~~~~~-l~~~~~~~~Vyvs~Gs~~~~~ 298 (478)
....+.++..+...++...........|+.++++.. .....+| ....+++++|++++|+.....
T Consensus 192 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~ 256 (412)
T 3otg_A 192 DGFGNPFIDIFPPSLQEPEFRARPRRHELRPVPFAE---------------QGDLPAWLSSRDTARPLVYLTLGTSSGGT 256 (412)
T ss_dssp GGGGCCEEECSCGGGSCHHHHTCTTEEECCCCCCCC---------------CCCCCGGGGGSCTTSCEEEEECTTTTCSC
T ss_pred cCCCCeEEeeCCHHhcCCcccCCCCcceeeccCCCC---------------CCCCCCccccccCCCCEEEEEcCCCCcCc
Confidence 123455666665555422100000000122222210 1223345 232345679999999997666
Q ss_pred HHHHHHHHHHHhhCCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChHhhhhccCcceeeeccCchhhHH
Q 011724 299 KNDIVEIALGLLLSEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQIDVISHSAIGGFLTHCGWNSIQE 378 (478)
Q Consensus 299 ~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~~vL~~~~v~~~ItHGG~~s~~E 378 (478)
.+.+..+++++++.+.+++|++++. ...+.+.+ .++|+.+.+|+|+.++|+++++ ||+|||.||+.|
T Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~g~~--------~~~~~l~~---~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~E 323 (412)
T 3otg_A 257 VEVLRAAIDGLAGLDADVLVASGPS--------LDVSGLGE---VPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLG 323 (412)
T ss_dssp HHHHHHHHHHHHTSSSEEEEECCSS--------CCCTTCCC---CCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEECCC--------CChhhhcc---CCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHH
Confidence 7788999999999999999998765 11122222 5789999999999999999999 999999999999
Q ss_pred HHhcCcceeccCcccchhHHHHHhhc----------ccCHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHhcCCCh
Q 011724 379 SIWCSVPLLCFPLLTDQFTNRKLVKS----------SITKEEVSEKINRLMSGKSSDELRKNIKEVRKKLENALSADGSS 448 (478)
Q Consensus 379 al~~GvP~l~~P~~~DQ~~na~rv~~----------~~t~~~l~~~v~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~ 448 (478)
|+++|+|+|++|...||..|+.++++ .+++++|.+++.++++ |+++++++.+.++++.+ ..+.
T Consensus 324 a~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~---~~~~~~~~~~~~~~~~~----~~~~ 396 (412)
T 3otg_A 324 ALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLA---EESYRAGARAVAAEIAA----MPGP 396 (412)
T ss_dssp HHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHH----SCCH
T ss_pred HHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHh---CHHHHHHHHHHHHHHhc----CCCH
Confidence 99999999999999999999999988 4589999999999999 89999999999998876 3444
Q ss_pred HHHHHHHHHHH
Q 011724 449 QKNFNQFINDV 459 (478)
Q Consensus 449 ~~~~~~~i~~~ 459 (478)
...+ +.++++
T Consensus 397 ~~~~-~~~~~l 406 (412)
T 3otg_A 397 DEVV-RLLPGF 406 (412)
T ss_dssp HHHH-TTHHHH
T ss_pred HHHH-HHHHHH
Confidence 4444 444443
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.95 E-value=1.8e-26 Score=230.11 Aligned_cols=308 Identities=10% Similarity=0.102 Sum_probs=190.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchh--hhhhhhcCCCCCcchhccccCCCCCeEEEEcCCC-CCC
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIH--HQITKAQSNGDEDDIFAGARKAGLDIRYATVSDG-LPL 86 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~ 86 (478)
.||+|...++.||++|.++||++|+++||+|+|+++.... +.+. +. ++.++.++.. +..
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~---~~---------------g~~~~~i~~~~~~~ 64 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVP---KA---------------GLPLHLIQVSGLRG 64 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTG---GG---------------TCCEEECC------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhh---hc---------------CCcEEEEECCCcCC
Confidence 7899988877899999999999999999999999987643 3344 33 6777777632 111
Q ss_pred C--CCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCc--hhhHHHHHHcCCccEEEecchhHHHHHHHh
Q 011724 87 N--FDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFF--VWSSMIAKKYNLVNISFWTEPALVLTLYYH 162 (478)
Q Consensus 87 ~--~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 162 (478)
. .........++..+. ....++++ .+||+||++... ..+..+|+.+|||++..-.
T Consensus 65 ~~~~~~~~~~~~~~~~~~-----~~~~~l~~-----~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~----------- 123 (365)
T 3s2u_A 65 KGLKSLVKAPLELLKSLF-----QALRVIRQ-----LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ----------- 123 (365)
T ss_dssp --------CHHHHHHHHH-----HHHHHHHH-----HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC-----------
T ss_pred CCHHHHHHHHHHHHHHHH-----HHHHHHHh-----cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEec-----------
Confidence 0 000111112222111 12234454 469999999755 4567889999999986421
Q ss_pred hhhhhhcCCCCCCCCCCCccccCCCCCCCCccccchhhhhcCCchHHHHHHHHHhhhhccccEEEecChhhhcHHHHHHH
Q 011724 163 MDLLRSHGHFASTDNREDTIDYIPGVRAIERKDLMSYLQATDTSTVVHRIIQKAFEDVKRVDFILCNTVHELESETISAL 242 (478)
Q Consensus 163 ~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~ 242 (478)
+..||+. .++. .+.++.++.. +++..
T Consensus 124 --------------------n~~~G~~---------------------nr~l-----~~~a~~v~~~-~~~~~------- 149 (365)
T 3s2u_A 124 --------------------NAVAGTA---------------------NRSL-----APIARRVCEA-FPDTF------- 149 (365)
T ss_dssp --------------------SSSCCHH---------------------HHHH-----GGGCSEEEES-STTSS-------
T ss_pred --------------------chhhhhH---------------------HHhh-----ccccceeeec-ccccc-------
Confidence 1233321 0000 0122333332 22110
Q ss_pred HhcCC-ccccccCCCCCCCCCCCCCCCCChhhHhHhhcCCCCCceEEEEecccccCCHHHHHHHHHHHhhC----CCeEE
Q 011724 243 HQKQP-TYAIGPIFPAGFTKSLVPTSLWSESECTQWLNTKPRGSVLYVSFGSYAHASKNDIVEIALGLLLS----EVSFV 317 (478)
Q Consensus 243 ~~~~p-~~~vGp~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~~~al~~~----~~~~i 317 (478)
+... .+++|..+...... ... ......++++.|++..||..... ..+.+.+++.+. +..++
T Consensus 150 -~~~~k~~~~g~pvr~~~~~---------~~~--~~~~~~~~~~~ilv~gGs~g~~~--~~~~~~~al~~l~~~~~~~vi 215 (365)
T 3s2u_A 150 -PASDKRLTTGNPVRGELFL---------DAH--ARAPLTGRRVNLLVLGGSLGAEP--LNKLLPEALAQVPLEIRPAIR 215 (365)
T ss_dssp -CC---CEECCCCCCGGGCC---------CTT--SSCCCTTSCCEEEECCTTTTCSH--HHHHHHHHHHTSCTTTCCEEE
T ss_pred -cCcCcEEEECCCCchhhcc---------chh--hhcccCCCCcEEEEECCcCCccc--cchhhHHHHHhcccccceEEE
Confidence 0112 66777776543211 000 11112244668999889887533 234455666543 44667
Q ss_pred EEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccCh-HhhhhccCcceeeeccCchhhHHHHhcCcceeccCcc----
Q 011724 318 WVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQ-IDVISHSAIGGFLTHCGWNSIQESIWCSVPLLCFPLL---- 392 (478)
Q Consensus 318 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq-~~vL~~~~v~~~ItHGG~~s~~Eal~~GvP~l~~P~~---- 392 (478)
+.++.. ..+.+.+.+. . .+.++.+.+|+++ .++|+.+|+ +|||+|.+|+.|++++|+|+|++|+.
T Consensus 216 ~~~G~~-----~~~~~~~~~~-~--~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~ 285 (365)
T 3s2u_A 216 HQAGRQ-----HAEITAERYR-T--VAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAID 285 (365)
T ss_dssp EECCTT-----THHHHHHHHH-H--TTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----C
T ss_pred EecCcc-----ccccccceec-c--cccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCC
Confidence 766544 1111112222 2 5678999999986 579999999 99999999999999999999999974
Q ss_pred cchhHHHHHhhc----------ccCHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHH
Q 011724 393 TDQFTNRKLVKS----------SITKEEVSEKINRLMSGKSSDELRKNIKEVRKKLEN 440 (478)
Q Consensus 393 ~DQ~~na~rv~~----------~~t~~~l~~~v~~ll~~~~~~~~r~~a~~l~~~~~~ 440 (478)
.+|..||..+++ .++++.|.++|.++++ |++.++ +|++..++
T Consensus 286 ~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~---d~~~~~---~m~~~a~~ 337 (365)
T 3s2u_A 286 DHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLM---HPETLR---SMADQARS 337 (365)
T ss_dssp CHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHH---CTHHHH---HHHHHHHH
T ss_pred cHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHC---CHHHHH---HHHHHHHh
Confidence 489999999988 6789999999999998 765443 45555554
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.93 E-value=7.1e-25 Score=194.38 Aligned_cols=154 Identities=21% Similarity=0.407 Sum_probs=130.4
Q ss_pred CCCChhhHhHhhcCCCCCceEEEEecccc-cCCHHHHHHHHHHHhhCCCeEEEEECCCCCCCCccCCCChhhhhhhccCC
Q 011724 267 SLWSESECTQWLNTKPRGSVLYVSFGSYA-HASKNDIVEIALGLLLSEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISG 345 (478)
Q Consensus 267 ~l~~~~~~~~~l~~~~~~~~Vyvs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 345 (478)
++ ++++.+|++..+++++||+++||.. ....+.+..+++++++.+.+++|++++. .++ . .++
T Consensus 6 ~l--~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~---------~~~----~--~~~ 68 (170)
T 2o6l_A 6 PL--PKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGN---------KPD----T--LGL 68 (170)
T ss_dssp CC--CHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSS---------CCT----T--CCT
T ss_pred CC--CHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCc---------Ccc----c--CCC
Confidence 46 8899999987767789999999996 4567788999999999899999998754 111 1 567
Q ss_pred CeEEeeccChHhhhhccCcceeeeccCchhhHHHHhcCcceeccCcccchhHHHHHhhc----------ccCHHHHHHHH
Q 011724 346 RGLIVPWCSQIDVISHSAIGGFLTHCGWNSIQESIWCSVPLLCFPLLTDQFTNRKLVKS----------SITKEEVSEKI 415 (478)
Q Consensus 346 nv~v~~~ipq~~vL~~~~v~~~ItHGG~~s~~Eal~~GvP~l~~P~~~DQ~~na~rv~~----------~~t~~~l~~~v 415 (478)
|+.+.+|+||.++|.|+.+++||||||+||++||+++|+|+|++|...||..||.++++ .++.++|.++|
T Consensus 69 ~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i 148 (170)
T 2o6l_A 69 NTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLNAL 148 (170)
T ss_dssp TEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHHHH
T ss_pred cEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHHHH
Confidence 99999999999999665555599999999999999999999999999999999999988 45899999999
Q ss_pred HHHhCCCChHHHHHHHHHHHHHHHH
Q 011724 416 NRLMSGKSSDELRKNIKEVRKKLEN 440 (478)
Q Consensus 416 ~~ll~~~~~~~~r~~a~~l~~~~~~ 440 (478)
.+++. +++|+++++++++.+++
T Consensus 149 ~~ll~---~~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 149 KRVIN---DPSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHHH---CHHHHHHHHHHC-----
T ss_pred HHHHc---CHHHHHHHHHHHHHhhC
Confidence 99998 89999999999998863
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.82 E-value=1.2e-18 Score=173.02 Aligned_cols=293 Identities=11% Similarity=0.077 Sum_probs=176.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchh--hhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCCCCC
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIH--HQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLPLN 87 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 87 (478)
|||++++.+..||..+++.||+.|+++||+|++++..... ..+. .. ++.+..++.....
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~---~~---------------g~~~~~~~~~~~~- 67 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVP---KH---------------GIEIDFIRISGLR- 67 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGG---GG---------------TCEEEECCCCCCT-
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhcc---cc---------------CCceEEecCCccC-
Confidence 8999999777799999999999999999999999986532 2233 23 6777766532111
Q ss_pred CCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCc--hhhHHHHHHcCCccEEEecchhHHHHHHHhhhh
Q 011724 88 FDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFF--VWSSMIAKKYNLVNISFWTEPALVLTLYYHMDL 165 (478)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 165 (478)
. ......+....... ..+..+.+.++. .+||+|+++... ..+..+++.+|+|+|.....
T Consensus 68 --~-~~~~~~~~~~~~~~-~~~~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~------------- 128 (364)
T 1f0k_A 68 --G-KGIKALIAAPLRIF-NAWRQARAIMKA--YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQN------------- 128 (364)
T ss_dssp --T-CCHHHHHTCHHHHH-HHHHHHHHHHHH--HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECS-------------
T ss_pred --c-CccHHHHHHHHHHH-HHHHHHHHHHHh--cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecC-------------
Confidence 1 11111111111100 112223333332 469999998643 45677888999999864321
Q ss_pred hhhcCCCCCCCCCCCccccCCCCCCCCccccchhhhhcCCchHHHHHHHHHhhhhccccEEEecChhhhcHHHHHHHHhc
Q 011724 166 LRSHGHFASTDNREDTIDYIPGVRAIERKDLMSYLQATDTSTVVHRIIQKAFEDVKRVDFILCNTVHELESETISALHQK 245 (478)
Q Consensus 166 ~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~~~~ 245 (478)
..++. ..++ .....+.+++.+...
T Consensus 129 ------------------~~~~~--------------------~~~~------~~~~~d~v~~~~~~~------------ 152 (364)
T 1f0k_A 129 ------------------GIAGL--------------------TNKW------LAKIATKVMQAFPGA------------ 152 (364)
T ss_dssp ------------------SSCCH--------------------HHHH------HTTTCSEEEESSTTS------------
T ss_pred ------------------CCCcH--------------------HHHH------HHHhCCEEEecChhh------------
Confidence 01110 0000 012345555544321
Q ss_pred CC-ccccccCCCCCCCCCCCCCCCCChhhHhHhhcCCCCCceEEEEecccccCCHHHHHHHHHHHhhC--CCeEEEEECC
Q 011724 246 QP-TYAIGPIFPAGFTKSLVPTSLWSESECTQWLNTKPRGSVLYVSFGSYAHASKNDIVEIALGLLLS--EVSFVWVLRP 322 (478)
Q Consensus 246 ~p-~~~vGp~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~ 322 (478)
.| +..+|..+...... .....+.+...+++++|+++.|+... ......+++++++. +.++++.++.
T Consensus 153 ~~~~~~i~n~v~~~~~~---------~~~~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~ 221 (364)
T 1f0k_A 153 FPNAEVVGNPVRTDVLA---------LPLPQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGK 221 (364)
T ss_dssp SSSCEECCCCCCHHHHT---------SCCHHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCT
T ss_pred cCCceEeCCccchhhcc---------cchhhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCC
Confidence 12 45565544321100 00011122222345677777788753 33344455665543 4566666665
Q ss_pred CCCCCCccCCCChhhhhhh-ccC-CCeEEeeccC-hHhhhhccCcceeeeccCchhhHHHHhcCcceeccCcc---cchh
Q 011724 323 DIVSSDETDFLPVGFEEKI-KIS-GRGLIVPWCS-QIDVISHSAIGGFLTHCGWNSIQESIWCSVPLLCFPLL---TDQF 396 (478)
Q Consensus 323 ~~~~~~~~~~l~~~~~~~~-~~~-~nv~v~~~ip-q~~vL~~~~v~~~ItHGG~~s~~Eal~~GvP~l~~P~~---~DQ~ 396 (478)
+ . .+.+.+.+ +.+ ++|.+.+|++ ...+++.+++ +|+++|.+++.||+++|+|+|+.|.. .||.
T Consensus 222 ~--------~-~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~ 290 (364)
T 1f0k_A 222 G--------S-QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQY 290 (364)
T ss_dssp T--------C-HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHH
T ss_pred c--------h-HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHH
Confidence 5 1 12222211 022 5899999995 4789999999 99999999999999999999999987 7999
Q ss_pred HHHHHhhc----------ccCHHHHHHHHHHH
Q 011724 397 TNRKLVKS----------SITKEEVSEKINRL 418 (478)
Q Consensus 397 ~na~rv~~----------~~t~~~l~~~v~~l 418 (478)
.|+..+.+ +.+.++++++|.++
T Consensus 291 ~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l 322 (364)
T 1f0k_A 291 WNALPLEKAGAAKIIEQPQLSVDAVANTLAGW 322 (364)
T ss_dssp HHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC
T ss_pred HHHHHHHhCCcEEEeccccCCHHHHHHHHHhc
Confidence 99998886 34589999999988
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.58 E-value=6.8e-14 Score=132.93 Aligned_cols=109 Identities=9% Similarity=0.077 Sum_probs=81.4
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccCh-Hhhhhc
Q 011724 283 RGSVLYVSFGSYAHASKNDIVEIALGLLLSEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQ-IDVISH 361 (478)
Q Consensus 283 ~~~~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq-~~vL~~ 361 (478)
+.+.|+|++|... ..+....+++++.+.. ++.++++.. ....+.+.......+|+.+..|+++ .++++.
T Consensus 156 ~~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~-------~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~ 225 (282)
T 3hbm_A 156 KKYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSS-------NPNLKKLQKFAKLHNNIRLFIDHENIAKLMNE 225 (282)
T ss_dssp CCEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTT-------CTTHHHHHHHHHTCSSEEEEESCSCHHHHHHT
T ss_pred cCCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCC-------chHHHHHHHHHhhCCCEEEEeCHHHHHHHHHH
Confidence 3457999999754 3346667888887654 566666644 0111222222112348999999986 469999
Q ss_pred cCcceeeeccCchhhHHHHhcCcceeccCcccchhHHHHHhhc
Q 011724 362 SAIGGFLTHCGWNSIQESIWCSVPLLCFPLLTDQFTNRKLVKS 404 (478)
Q Consensus 362 ~~v~~~ItHGG~~s~~Eal~~GvP~l~~P~~~DQ~~na~rv~~ 404 (478)
+++ +||+|| +|++|+++.|+|+|++|...+|..||..+++
T Consensus 226 aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~ 265 (282)
T 3hbm_A 226 SNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK 265 (282)
T ss_dssp EEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH
T ss_pred CCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH
Confidence 999 999999 8999999999999999999999999999876
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.50 E-value=4e-14 Score=129.25 Aligned_cols=128 Identities=13% Similarity=0.085 Sum_probs=92.6
Q ss_pred CCCceEEEEecccccCCHHHHHHH-----HHHHhhCC-CeEEEEECCCCCCCCccCCCChhhhhhh--------------
Q 011724 282 PRGSVLYVSFGSYAHASKNDIVEI-----ALGLLLSE-VSFVWVLRPDIVSSDETDFLPVGFEEKI-------------- 341 (478)
Q Consensus 282 ~~~~~Vyvs~Gs~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~~~l~~~~~~~~-------------- 341 (478)
+++++|||+.||... -.+.+..+ +.+|.+.+ .++++.++.... + ....+...+
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~-----~-~~~~~~~~~~~~~~~~l~p~~~~ 98 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS-----S-EFEHLVQERGGQRESQKIPIDQF 98 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC-----C-CCCSHHHHHTCEECSCCCSSCTT
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch-----h-hHHHHHHhhhccccccccccccc
Confidence 456789999999742 34444443 48888877 789999886611 0 001100000
Q ss_pred -----------c-cCCCeEEeeccChH-hhhh-ccCcceeeeccCchhhHHHHhcCcceeccCcc----cchhHHHHHhh
Q 011724 342 -----------K-ISGRGLIVPWCSQI-DVIS-HSAIGGFLTHCGWNSIQESIWCSVPLLCFPLL----TDQFTNRKLVK 403 (478)
Q Consensus 342 -----------~-~~~nv~v~~~ipq~-~vL~-~~~v~~~ItHGG~~s~~Eal~~GvP~l~~P~~----~DQ~~na~rv~ 403 (478)
. ..-++.+.+|+++. ++|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||++++
T Consensus 99 ~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~ 176 (224)
T 2jzc_A 99 GCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFV 176 (224)
T ss_dssp CTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHH
T ss_pred cccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHH
Confidence 0 01245667898764 8999 9999 99999999999999999999999984 36999999999
Q ss_pred c-----ccCHHHHHHHHHHH
Q 011724 404 S-----SITKEEVSEKINRL 418 (478)
Q Consensus 404 ~-----~~t~~~l~~~v~~l 418 (478)
+ .++.++|.++|.++
T Consensus 177 ~~G~~~~~~~~~L~~~i~~l 196 (224)
T 2jzc_A 177 ELGYVWSCAPTETGLIAGLR 196 (224)
T ss_dssp HHSCCCEECSCTTTHHHHHH
T ss_pred HCCCEEEcCHHHHHHHHHHH
Confidence 8 55777888888777
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.41 E-value=3.1e-10 Score=115.02 Aligned_cols=345 Identities=11% Similarity=0.083 Sum_probs=169.3
Q ss_pred CCCCCCEEEEEcC---C--------CccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCC
Q 011724 5 HKKPKPHAIAICY---P--------LQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGL 73 (478)
Q Consensus 5 ~~~~~~~il~~~~---~--------~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (478)
...+||||++++. | ..|+-..+..||+.|.++||+|++++......... .. ....
T Consensus 16 ~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~---~~-----------~~~~ 81 (438)
T 3c48_A 16 PRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGE---IV-----------RVAE 81 (438)
T ss_dssp ---CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCS---EE-----------EEET
T ss_pred cCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcc---cc-----------cccC
Confidence 3467899999994 2 35788889999999999999999999765322111 00 0011
Q ss_pred CeEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCc--hhhHHHHHHcCCccEEEec
Q 011724 74 DIRYATVSDGLPLNFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFF--VWSSMIAKKYNLVNISFWT 151 (478)
Q Consensus 74 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~--~~~~~~A~~lgiP~v~~~~ 151 (478)
++.++.++......... ......+..+. ...++..++.. .+||+|++.... ..+..+++.+|+|+|....
T Consensus 82 ~v~v~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~----~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h 153 (438)
T 3c48_A 82 NLRVINIAAGPYEGLSK-EELPTQLAAFT---GGMLSFTRREK----VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAH 153 (438)
T ss_dssp TEEEEEECCSCSSSCCG-GGGGGGHHHHH---HHHHHHHHHHT----CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECS
T ss_pred CeEEEEecCCCccccch-hHHHHHHHHHH---HHHHHHHHhcc----CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEec
Confidence 67777665332111100 11111111111 11111112222 249999987533 2345577888999988765
Q ss_pred chhHHHHHHHhhhhhhhcCCCCCCCCCCCccccCCCCCCCCccccchhhhhcCCchHHHHHHHHHhhhhccccEEEecCh
Q 011724 152 EPALVLTLYYHMDLLRSHGHFASTDNREDTIDYIPGVRAIERKDLMSYLQATDTSTVVHRIIQKAFEDVKRVDFILCNTV 231 (478)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 231 (478)
...... ...+... .... ......+. ...+..++.+++.+.
T Consensus 154 ~~~~~~---------------------------~~~~~~~---~~~~--------~~~~~~~~--~~~~~~~d~ii~~s~ 193 (438)
T 3c48_A 154 TLAAVK---------------------------NSYRDDS---DTPE--------SEARRICE--QQLVDNADVLAVNTQ 193 (438)
T ss_dssp SCHHHH---------------------------SCC-------CCHH--------HHHHHHHH--HHHHHHCSEEEESSH
T ss_pred CCcccc---------------------------ccccccc---CCcc--------hHHHHHHH--HHHHhcCCEEEEcCH
Confidence 432210 0000000 0000 00001110 122456788888887
Q ss_pred hhhcHHHHHHHHhcCC--ccccccCCCCCCCCCCCCCCCCChhhHhHhhcCCCCCceEEEEecccccC-CHHHHHHHHHH
Q 011724 232 HELESETISALHQKQP--TYAIGPIFPAGFTKSLVPTSLWSESECTQWLNTKPRGSVLYVSFGSYAHA-SKNDIVEIALG 308 (478)
Q Consensus 232 ~~le~~~~~~~~~~~p--~~~vGp~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Vyvs~Gs~~~~-~~~~~~~~~~a 308 (478)
...+.- .+.. ...+ +..++..+...... .......+.+.+-+.-.++ ..+++..|..... ..+.+...+..
T Consensus 194 ~~~~~~-~~~~-g~~~~k~~vi~ngvd~~~~~---~~~~~~~~~~r~~~~~~~~-~~~i~~~G~~~~~Kg~~~li~a~~~ 267 (438)
T 3c48_A 194 EEMQDL-MHHY-DADPDRISVVSPGADVELYS---PGNDRATERSRRELGIPLH-TKVVAFVGRLQPFKGPQVLIKAVAA 267 (438)
T ss_dssp HHHHHH-HHHH-CCCGGGEEECCCCCCTTTSC---CC----CHHHHHHTTCCSS-SEEEEEESCBSGGGCHHHHHHHHHH
T ss_pred HHHHHH-HHHh-CCChhheEEecCCccccccC---CcccchhhhhHHhcCCCCC-CcEEEEEeeecccCCHHHHHHHHHH
Confidence 644411 1111 1111 44454443322111 0000001113333332222 3567777877532 22333333333
Q ss_pred HhhC----CCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccCh---HhhhhccCcceeeec----cCchhhH
Q 011724 309 LLLS----EVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQ---IDVISHSAIGGFLTH----CGWNSIQ 377 (478)
Q Consensus 309 l~~~----~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq---~~vL~~~~v~~~ItH----GG~~s~~ 377 (478)
+.+. +.+++ .++.....+...+.+ ..+..++.+.++|.+.+|+|+ ..+++.+++ +|.- |..+++.
T Consensus 268 l~~~~p~~~~~l~-i~G~~~~~g~~~~~l-~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~ 343 (438)
T 3c48_A 268 LFDRDPDRNLRVI-ICGGPSGPNATPDTY-RHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAM 343 (438)
T ss_dssp HHHHCTTCSEEEE-EECCBC------CHH-HHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHH
T ss_pred HHhhCCCcceEEE-EEeCCCCCCcHHHHH-HHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHH
Confidence 3322 23343 344310000000111 112222224678999999986 468889998 6653 3346899
Q ss_pred HHHhcCcceeccCcccchhHHHHHhhc--------ccCHHHHHHHHHHHhCCCChHHHH
Q 011724 378 ESIWCSVPLLCFPLLTDQFTNRKLVKS--------SITKEEVSEKINRLMSGKSSDELR 428 (478)
Q Consensus 378 Eal~~GvP~l~~P~~~DQ~~na~rv~~--------~~t~~~l~~~v~~ll~~~~~~~~r 428 (478)
||+++|+|+|+.+. ......+.+ .-+.++++++|.++++ +++.+
T Consensus 344 Eama~G~PvI~~~~----~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~---~~~~~ 395 (438)
T 3c48_A 344 EAQASGTPVIAARV----GGLPIAVAEGETGLLVDGHSPHAWADALATLLD---DDETR 395 (438)
T ss_dssp HHHHTTCCEEEESC----TTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHH---CHHHH
T ss_pred HHHHcCCCEEecCC----CChhHHhhCCCcEEECCCCCHHHHHHHHHHHHc---CHHHH
Confidence 99999999999764 233334433 3478999999999998 55443
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.33 E-value=9.1e-10 Score=109.62 Aligned_cols=350 Identities=11% Similarity=0.036 Sum_probs=181.9
Q ss_pred CCCCEEEEEcC--C--CccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCC
Q 011724 7 KPKPHAIAICY--P--LQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSD 82 (478)
Q Consensus 7 ~~~~~il~~~~--~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 82 (478)
++||||++++. + ..|.-..+..|++.| +||+|++++........... .. ..++.+..++.
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~-~~-------------~~~~~~~~~~~ 65 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAY-DK-------------TLDYEVIRWPR 65 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHH-HT-------------TCSSEEEEESS
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhh-cc-------------ccceEEEEccc
Confidence 45699999984 3 357888889999999 79999999987765421100 11 11677777664
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCc--hhhHHHHHHcCCccEEEecchhHHHHHH
Q 011724 83 GLPLNFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFF--VWSSMIAKKYNLVNISFWTEPALVLTLY 160 (478)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 160 (478)
...- .. .... ..+..+++. .+||+|++.... .....+++.+|+|.+.+........
T Consensus 66 ~~~~-----~~-~~~~--------~~l~~~~~~-----~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--- 123 (394)
T 3okp_A 66 SVML-----PT-PTTA--------HAMAEIIRE-----REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG--- 123 (394)
T ss_dssp SSCC-----SC-HHHH--------HHHHHHHHH-----TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH---
T ss_pred cccc-----cc-hhhH--------HHHHHHHHh-----cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh---
Confidence 3211 01 1111 123344444 469999986544 3455668889998554332211100
Q ss_pred HhhhhhhhcCCCCCCCCCCCccccCCCCCCCCccccchhhhhcCCchHHHHHHHHHhhhhccccEEEecChhhhcHHHHH
Q 011724 161 YHMDLLRSHGHFASTDNREDTIDYIPGVRAIERKDLMSYLQATDTSTVVHRIIQKAFEDVKRVDFILCNTVHELESETIS 240 (478)
Q Consensus 161 ~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~ 240 (478)
+. .....+.+.. ..+..++.+++.+....+.- .+
T Consensus 124 -----------------------~~--------------------~~~~~~~~~~--~~~~~~d~ii~~s~~~~~~~-~~ 157 (394)
T 3okp_A 124 -----------------------WS--------------------MLPGSRQSLR--KIGTEVDVLTYISQYTLRRF-KS 157 (394)
T ss_dssp -----------------------HT--------------------TSHHHHHHHH--HHHHHCSEEEESCHHHHHHH-HH
T ss_pred -----------------------hh--------------------hcchhhHHHH--HHHHhCCEEEEcCHHHHHHH-HH
Confidence 00 0001111111 12356788888887644311 11
Q ss_pred HHHhcCCccccccCCCCCCCCCCCCCCC-CChhhHhHhhcCCCCCceEEEEecccccC-CHHHHHHHHHHHhh--CCCeE
Q 011724 241 ALHQKQPTYAIGPIFPAGFTKSLVPTSL-WSESECTQWLNTKPRGSVLYVSFGSYAHA-SKNDIVEIALGLLL--SEVSF 316 (478)
Q Consensus 241 ~~~~~~p~~~vGp~~~~~~~~~~~~~~l-~~~~~~~~~l~~~~~~~~Vyvs~Gs~~~~-~~~~~~~~~~al~~--~~~~~ 316 (478)
......++..+..-+...... ... .....+.+.+.-.+ ...+++..|+.... ..+.+...+..+.+ .+.++
T Consensus 158 ~~~~~~~~~vi~ngv~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l 232 (394)
T 3okp_A 158 AFGSHPTFEHLPSGVDVKRFT----PATPEDKSATRKKLGFTD-TTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQL 232 (394)
T ss_dssp HHCSSSEEEECCCCBCTTTSC----CCCHHHHHHHHHHTTCCT-TCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEE
T ss_pred hcCCCCCeEEecCCcCHHHcC----CCCchhhHHHHHhcCCCc-CceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEE
Confidence 111111144454443322111 001 00123333333222 33577778887522 23333333333333 24555
Q ss_pred EEEECCCCCCCCccCCCChhhhhh-hccCCCeEEeeccChH---hhhhccCcceeee-----------ccCchhhHHHHh
Q 011724 317 VWVLRPDIVSSDETDFLPVGFEEK-IKISGRGLIVPWCSQI---DVISHSAIGGFLT-----------HCGWNSIQESIW 381 (478)
Q Consensus 317 i~~~~~~~~~~~~~~~l~~~~~~~-~~~~~nv~v~~~ipq~---~vL~~~~v~~~It-----------HGG~~s~~Eal~ 381 (478)
+++ |.+ ...+.+... ..+.++|.+.+|+|+. .++..+++ +|. -|..+++.||++
T Consensus 233 ~i~-G~g--------~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a 301 (394)
T 3okp_A 233 LIV-GSG--------RYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQA 301 (394)
T ss_dssp EEE-CCC--------TTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHH
T ss_pred EEE-cCc--------hHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHH
Confidence 544 322 111122111 1145789999999754 47888998 776 555679999999
Q ss_pred cCcceeccCccc--chhHH-HHHhhcccCHHHHHHHHHHHhCCCChHHHHHHHHHH-HHHHHHHHhcCCChHHHHHHHHH
Q 011724 382 CSVPLLCFPLLT--DQFTN-RKLVKSSITKEEVSEKINRLMSGKSSDELRKNIKEV-RKKLENALSADGSSQKNFNQFIN 457 (478)
Q Consensus 382 ~GvP~l~~P~~~--DQ~~n-a~rv~~~~t~~~l~~~v~~ll~~~~~~~~r~~a~~l-~~~~~~a~~~gg~~~~~~~~~i~ 457 (478)
+|+|+|+.+..+ |...+ ...+...-+.++++++|.++++ +++.+++..+- .+.+++ .-+.+..++++++
T Consensus 302 ~G~PvI~~~~~~~~e~i~~~~g~~~~~~d~~~l~~~i~~l~~---~~~~~~~~~~~~~~~~~~----~~s~~~~~~~~~~ 374 (394)
T 3okp_A 302 CGVPVIAGTSGGAPETVTPATGLVVEGSDVDKLSELLIELLD---DPIRRAAMGAAGRAHVEA----EWSWEIMGERLTN 374 (394)
T ss_dssp TTCCEEECSSTTGGGGCCTTTEEECCTTCHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHH----HTBHHHHHHHHHH
T ss_pred cCCCEEEeCCCChHHHHhcCCceEeCCCCHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHH----hCCHHHHHHHHHH
Confidence 999999987632 21111 1111114489999999999998 65544333222 222222 2455566666666
Q ss_pred HHHhcC
Q 011724 458 DVQFLT 463 (478)
Q Consensus 458 ~~~~~~ 463 (478)
-+.+..
T Consensus 375 ~~~~~~ 380 (394)
T 3okp_A 375 ILQSEP 380 (394)
T ss_dssp HHHSCC
T ss_pred HHHHhc
Confidence 666544
No 27
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.33 E-value=9.3e-11 Score=116.50 Aligned_cols=134 Identities=14% Similarity=0.142 Sum_probs=82.0
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhh-----CCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccCh---
Q 011724 284 GSVLYVSFGSYAHASKNDIVEIALGLLL-----SEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQ--- 355 (478)
Q Consensus 284 ~~~Vyvs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq--- 355 (478)
+++|+++.|...... .+..+++|+++ .+.++++..+.+. .+-+.+.+.....++|.+.+++++
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~-------~~~~~l~~~~~~~~~v~~~g~~g~~~~ 268 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNP-------VVREAVFPVLKGVRNFVLLDPLEYGSM 268 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCH-------HHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCH-------HHHHHHHHHhccCCCEEEECCCCHHHH
Confidence 456777777553221 24445555543 2455555444330 011122221112358998866554
Q ss_pred HhhhhccCcceeeeccCchhhHHHHhcCcceeccCcccchhHHHHHhhc---ccCHHHHHHHHHHHhCCCChHHHHHHHH
Q 011724 356 IDVISHSAIGGFLTHCGWNSIQESIWCSVPLLCFPLLTDQFTNRKLVKS---SITKEEVSEKINRLMSGKSSDELRKNIK 432 (478)
Q Consensus 356 ~~vL~~~~v~~~ItHGG~~s~~Eal~~GvP~l~~P~~~DQ~~na~rv~~---~~t~~~l~~~v~~ll~~~~~~~~r~~a~ 432 (478)
..+++.+++ ||+.+| |.+.||+++|+|+|+.+...+++.....-.- ..+.++|++++.++++ |++.+++..
T Consensus 269 ~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~~~~g~g~lv~~d~~~la~~i~~ll~---d~~~~~~~~ 342 (376)
T 1v4v_A 269 AALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEGLKAGILKLAGTDPEGVYRVVKGLLE---NPEELSRMR 342 (376)
T ss_dssp HHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHHHHHTSEEECCSCHHHHHHHHHHHHT---CHHHHHHHH
T ss_pred HHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhhhcCCceEECCCCHHHHHHHHHHHHh---ChHhhhhhc
Confidence 588999999 999883 4466999999999998877776664211000 3589999999999998 776555433
No 28
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.24 E-value=1.2e-08 Score=102.86 Aligned_cols=387 Identities=11% Similarity=0.067 Sum_probs=183.9
Q ss_pred CCCEEEEEcCC-----CccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhh-----cCCCCCcchhccccCCCCCeEE
Q 011724 8 PKPHAIAICYP-----LQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKA-----QSNGDEDDIFAGARKAGLDIRY 77 (478)
Q Consensus 8 ~~~~il~~~~~-----~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~ 77 (478)
++|||++++.. ..|--.-+..||+.|+++||+|+++++......-... .........+. ....++.+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~gv~v 77 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSY---EERGNLRI 77 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEE---EEETTEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeee---ccCCCceE
Confidence 46999999832 3355566888999999999999999965322110000 00000000000 01126666
Q ss_pred EEcCCCCCCCCCCCCCHHHH-HHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCc--hhhHHHHHHcCCccEEEecchh
Q 011724 78 ATVSDGLPLNFDRSLNHDQF-MECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFF--VWSSMIAKKYNLVNISFWTEPA 154 (478)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~--~~~~~~A~~lgiP~v~~~~~~~ 154 (478)
..++...-............ ...+. .....+..+++.+.....+||+|.+.... ..+..+++..|+|+|.......
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~ 156 (439)
T 3fro_A 78 YRIGGGLLDSEDVYGPGWDGLIRKAV-TFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLN 156 (439)
T ss_dssp EEEESGGGGCSSTTCSHHHHHHHHHH-HHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCC
T ss_pred EEecchhccccccccCCcchhhhhhH-HHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEecccc
Confidence 66654110000001111111 22221 12223334445441112679999998644 3356677888999988764322
Q ss_pred HHHHHHHhhhhhhhcCCCCCCCCCCCccccCCCC--CCCCccccchhhhhcCCchHHHHHHHHHhhhhccccEEEecChh
Q 011724 155 LVLTLYYHMDLLRSHGHFASTDNREDTIDYIPGV--RAIERKDLMSYLQATDTSTVVHRIIQKAFEDVKRVDFILCNTVH 232 (478)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 232 (478)
.. ..+.. ......... . .......+. .+..++.+++.+..
T Consensus 157 ~~---------------------------~~~~~~~~~~~~~~~~----~-~~~~~~~~~------~~~~ad~ii~~S~~ 198 (439)
T 3fro_A 157 KS---------------------------KLPAFYFHEAGLSELA----P-YPDIDPEHT------GGYIADIVTTVSRG 198 (439)
T ss_dssp CC---------------------------CEEHHHHHHTTCGGGC----C-SSEECHHHH------HHHHCSEEEESCHH
T ss_pred cc---------------------------cCchHHhCcccccccc----c-cceeeHhhh------hhhhccEEEecCHH
Confidence 10 00000 000000000 0 000011111 23467888888766
Q ss_pred hhcHHHHHHHHhcC-CccccccCCCCCCCCCCCCCCCC-----ChhhHhHhhcCCCCCceEEEEecccc-cC-CHHHHHH
Q 011724 233 ELESETISALHQKQ-PTYAIGPIFPAGFTKSLVPTSLW-----SESECTQWLNTKPRGSVLYVSFGSYA-HA-SKNDIVE 304 (478)
Q Consensus 233 ~le~~~~~~~~~~~-p~~~vGp~~~~~~~~~~~~~~l~-----~~~~~~~~l~~~~~~~~Vyvs~Gs~~-~~-~~~~~~~ 304 (478)
..+. ......... ++..|..-+....-. ..... ....+.+-+.-. ++ .+++..|+.. .. ..+.+..
T Consensus 199 ~~~~-~~~~~~~~~~~i~vi~ngvd~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~-~~i~~~G~~~~~~Kg~~~li~ 272 (439)
T 3fro_A 199 YLID-EWGFFRNFEGKITYVFNGIDCSFWN---ESYLTGSRDERKKSLLSKFGMD-EG-VTFMFIGRFDRGQKGVDVLLK 272 (439)
T ss_dssp HHHH-THHHHGGGTTSEEECCCCCCTTTSC---GGGSCSCHHHHHHHHHHHHTCC-SC-EEEEEECCSSCTTBCHHHHHH
T ss_pred HHHH-HhhhhhhcCCceeecCCCCCchhcC---cccccchhhhhHHHHHHHcCCC-CC-cEEEEEcccccccccHHHHHH
Confidence 4442 111111111 233333322211100 00000 012333333332 33 6777888876 33 3444444
Q ss_pred HHHHHhhC----CCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChH---hhhhccCcceeee----ccCc
Q 011724 305 IALGLLLS----EVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQI---DVISHSAIGGFLT----HCGW 373 (478)
Q Consensus 305 ~~~al~~~----~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~---~vL~~~~v~~~It----HGG~ 373 (478)
.+..+.+. +.+++++ |.+. ....+.+ ..+..+ .++++.+.+|+|+. .++..+++ +|. -|-.
T Consensus 273 a~~~l~~~~~~~~~~l~i~-G~g~--~~~~~~l-~~~~~~--~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~ 344 (439)
T 3fro_A 273 AIEILSSKKEFQEMRFIII-GKGD--PELEGWA-RSLEEK--HGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFG 344 (439)
T ss_dssp HHHHHHTSGGGGGEEEEEE-CCCC--HHHHHHH-HHHHHH--CTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSC
T ss_pred HHHHHHhcccCCCeEEEEE-cCCC--hhHHHHH-HHHHhh--cCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCcc
Confidence 44445442 3344433 3220 0000000 112222 45455567999975 46888888 663 2334
Q ss_pred hhhHHHHhcCcceeccCcccchhHHHHHhhc-------ccCHHHHHHHHHHHhC-CCC-hHHHHHHHHHHHHHHHHHHhc
Q 011724 374 NSIQESIWCSVPLLCFPLLTDQFTNRKLVKS-------SITKEEVSEKINRLMS-GKS-SDELRKNIKEVRKKLENALSA 444 (478)
Q Consensus 374 ~s~~Eal~~GvP~l~~P~~~DQ~~na~rv~~-------~~t~~~l~~~v~~ll~-~~~-~~~~r~~a~~l~~~~~~a~~~ 444 (478)
+++.||+++|+|+|+... ......+.. .-+.++++++|.++++ +++ ...+.+++++..+.
T Consensus 345 ~~~~EAma~G~Pvi~s~~----~~~~e~~~~~~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~------- 413 (439)
T 3fro_A 345 LVALEAMCLGAIPIASAV----GGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS------- 413 (439)
T ss_dssp HHHHHHHHTTCEEEEESS----THHHHHCCTTTCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHT-------
T ss_pred HHHHHHHHCCCCeEEcCC----CCcceeEEcCceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh-------
Confidence 799999999999998754 333333322 4588999999999997 321 24445555444432
Q ss_pred CCChHHHHHHHHHHHHhc
Q 011724 445 DGSSQKNFNQFINDVQFL 462 (478)
Q Consensus 445 gg~~~~~~~~~i~~~~~~ 462 (478)
-+....++++++-+.+.
T Consensus 414 -~s~~~~~~~~~~~~~~~ 430 (439)
T 3fro_A 414 -FSWEKSAERYVKAYTGS 430 (439)
T ss_dssp -SCHHHHHHHHHHHHHTC
T ss_pred -CcHHHHHHHHHHHHHHH
Confidence 35456666666666654
No 29
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.24 E-value=7.7e-09 Score=103.35 Aligned_cols=310 Identities=9% Similarity=0.081 Sum_probs=158.4
Q ss_pred CCCCCCEEEEEcC---CC-ccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEc
Q 011724 5 HKKPKPHAIAICY---PL-QGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATV 80 (478)
Q Consensus 5 ~~~~~~~il~~~~---~~-~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (478)
...+||||+++.. +. .|.-.-+..|++.|+++||+|++++......... .. .. .. + .+..+
T Consensus 16 ~~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~---~~-------~~--~~--~-~~~~~ 80 (406)
T 2gek_A 16 PRGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLP---DY-------VV--SG--G-KAVPI 80 (406)
T ss_dssp -----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCC---TT-------EE--EC--C-CCC--
T ss_pred cCCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCC---cc-------cc--cC--C-cEEec
Confidence 3456799999983 22 4666889999999999999999999876433111 10 00 00 1 11112
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCc--hhhHHHHHHcCCccEEEecchhHHHH
Q 011724 81 SDGLPLNFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFF--VWSSMIAKKYNLVNISFWTEPALVLT 158 (478)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~ 158 (478)
+.... .. .+. +.......+..+++. .+||+|++.... ..+..+++..++|+|.......
T Consensus 81 ~~~~~--~~------~~~--~~~~~~~~l~~~l~~-----~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~---- 141 (406)
T 2gek_A 81 PYNGS--VA------RLR--FGPATHRKVKKWIAE-----GDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTST---- 141 (406)
T ss_dssp --------------------CCHHHHHHHHHHHHH-----HCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCC----
T ss_pred cccCC--cc------ccc--ccHHHHHHHHHHHHh-----cCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcc----
Confidence 11000 00 000 000011223344444 359999988654 2356677788999998753211
Q ss_pred HHHhhhhhhhcCCCCCCCCCCCccccCCCCCCCCccccchhhhhcCCchHHHHHHHHHhhhhccccEEEecChhhhcHHH
Q 011724 159 LYYHMDLLRSHGHFASTDNREDTIDYIPGVRAIERKDLMSYLQATDTSTVVHRIIQKAFEDVKRVDFILCNTVHELESET 238 (478)
Q Consensus 159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~ 238 (478)
+. ......+ ...+ . ..+..++.+++.+....+
T Consensus 142 ---------------------------~~------~~~~~~~---------~~~~-~--~~~~~~d~ii~~s~~~~~--- 173 (406)
T 2gek_A 142 ---------------------------TK------SLTLSVF---------QGIL-R--PYHEKIIGRIAVSDLARR--- 173 (406)
T ss_dssp ---------------------------CS------HHHHHHH---------HSTT-H--HHHTTCSEEEESSHHHHH---
T ss_pred ---------------------------hh------hhhHHHH---------HHHH-H--HHHhhCCEEEECCHHHHH---
Confidence 00 0000000 0000 0 224567888887765333
Q ss_pred HHHHHhcC--C-ccccccCCCCCCCCCCCCCCCCChhhHhHhhcCCCCCceEEEEeccc-cc-CCHHHHHHHHHHHhhC-
Q 011724 239 ISALHQKQ--P-TYAIGPIFPAGFTKSLVPTSLWSESECTQWLNTKPRGSVLYVSFGSY-AH-ASKNDIVEIALGLLLS- 312 (478)
Q Consensus 239 ~~~~~~~~--p-~~~vGp~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Vyvs~Gs~-~~-~~~~~~~~~~~al~~~- 312 (478)
...... . + .+...+...... +. ... ...++...+++..|+. .. -..+.+...+..+.+.
T Consensus 174 --~~~~~~~~~~~-vi~~~v~~~~~~-----~~--~~~-----~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~ 238 (406)
T 2gek_A 174 --WQMEALGSDAV-EIPNGVDVASFA-----DA--PLL-----DGYPREGRTVLFLGRYDEPRKGMAVLLAALPKLVARF 238 (406)
T ss_dssp --HHHHHHSSCEE-ECCCCBCHHHHH-----TC--CCC-----TTCSCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTS
T ss_pred --HHHHhcCCCcE-EecCCCChhhcC-----CC--chh-----hhccCCCeEEEEEeeeCccccCHHHHHHHHHHHHHHC
Confidence 222211 1 3 333332111000 00 000 0000012467777877 42 2233333333333332
Q ss_pred -CCeEEEEECCCCCCCCccCCCChhhhhhh-ccCCCeEEeeccCh---HhhhhccCcceeee----ccCc-hhhHHHHhc
Q 011724 313 -EVSFVWVLRPDIVSSDETDFLPVGFEEKI-KISGRGLIVPWCSQ---IDVISHSAIGGFLT----HCGW-NSIQESIWC 382 (478)
Q Consensus 313 -~~~~i~~~~~~~~~~~~~~~l~~~~~~~~-~~~~nv~v~~~ipq---~~vL~~~~v~~~It----HGG~-~s~~Eal~~ 382 (478)
+.+++++ |.+ .. +.+.+.+ +..++|.+.+++++ ..++..+++ +|. +.|+ +++.||+++
T Consensus 239 ~~~~l~i~-G~~--------~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~ 306 (406)
T 2gek_A 239 PDVEILIV-GRG--------DE-DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAA 306 (406)
T ss_dssp TTCEEEEE-SCS--------CH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHH
T ss_pred CCeEEEEE-cCC--------cH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHc
Confidence 4454444 333 11 2332221 13578999999986 578899999 663 3444 589999999
Q ss_pred CcceeccCcccchhHHHHHhhc--------ccCHHHHHHHHHHHhCCCChHHHHHH
Q 011724 383 SVPLLCFPLLTDQFTNRKLVKS--------SITKEEVSEKINRLMSGKSSDELRKN 430 (478)
Q Consensus 383 GvP~l~~P~~~DQ~~na~rv~~--------~~t~~~l~~~v~~ll~~~~~~~~r~~ 430 (478)
|+|+|+.+. ......+.+ .-+.+++.++|.++++ +++.+++
T Consensus 307 G~PvI~~~~----~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~---~~~~~~~ 355 (406)
T 2gek_A 307 GTAVVASDL----DAFRRVLADGDAGRLVPVDDADGMAAALIGILE---DDQLRAG 355 (406)
T ss_dssp TCEEEECCC----HHHHHHHTTTTSSEECCTTCHHHHHHHHHHHHH---CHHHHHH
T ss_pred CCCEEEecC----CcHHHHhcCCCceEEeCCCCHHHHHHHHHHHHc---CHHHHHH
Confidence 999999866 344444543 3588999999999998 6654443
No 30
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.23 E-value=2.4e-10 Score=114.61 Aligned_cols=323 Identities=9% Similarity=0.074 Sum_probs=165.3
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCchhhhhhhhc-CCCCCcchhccccCCCCCeEE-EEcCC
Q 011724 6 KKPKPHAIAICYPLQGHVIPFVNLALKLASS-GFTITFVNTHSIHHQITKAQ-SNGDEDDIFAGARKAGLDIRY-ATVSD 82 (478)
Q Consensus 6 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~-~~~~~ 82 (478)
+++||||++++ ++.....=+-+|.++|+++ |+++.++.+....+.....+ .. ++.. +.+.-
T Consensus 22 ~~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~---------------~i~~~~~l~~ 85 (396)
T 3dzc_A 22 SNAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELF---------------SITPDFDLNI 85 (396)
T ss_dssp --CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHT---------------TCCCSEECCC
T ss_pred hCCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhc---------------CCCCceeeec
Confidence 35578998887 7777777788899999987 78887666644432211000 22 2210 11110
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcC--Cc-hhhHHHHHHcCCccEEEecchhHHHHH
Q 011724 83 GLPLNFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDT--FF-VWSSMIAKKYNLVNISFWTEPALVLTL 159 (478)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~--~~-~~~~~~A~~lgiP~v~~~~~~~~~~~~ 159 (478)
. .....+.... ......+..+++.. +||+|++-. .+ +.+..+|+.+|||++.+..+
T Consensus 86 ~-----~~~~~~~~~~----~~~~~~l~~~l~~~-----kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag------- 144 (396)
T 3dzc_A 86 M-----EPGQTLNGVT----SKILLGMQQVLSSE-----QPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAG------- 144 (396)
T ss_dssp C-----CTTCCHHHHH----HHHHHHHHHHHHHH-----CCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCC-------
T ss_pred C-----CCCCCHHHHH----HHHHHHHHHHHHhc-----CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECC-------
Confidence 0 0112222221 11222344555553 599999832 23 45578899999998765211
Q ss_pred HHhhhhhhhcCCCCCCCCCCCccccCCCCCCCCccccchhhhhcCCchHHHHHHHHHhhhhccccEEEecChhhhcHHHH
Q 011724 160 YYHMDLLRSHGHFASTDNREDTIDYIPGVRAIERKDLMSYLQATDTSTVVHRIIQKAFEDVKRVDFILCNTVHELESETI 239 (478)
Q Consensus 160 ~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~ 239 (478)
+...... ..+ .....+.+.. ..++.+++.+....+
T Consensus 145 ----------------------------~rs~~~~--~~~------~~~~~r~~~~-----~~a~~~~~~se~~~~---- 179 (396)
T 3dzc_A 145 ----------------------------LRTGNIY--SPW------PEEGNRKLTA-----ALTQYHFAPTDTSRA---- 179 (396)
T ss_dssp ----------------------------CCCSCTT--SST------THHHHHHHHH-----HTCSEEEESSHHHHH----
T ss_pred ----------------------------ccccccc--cCC------cHHHHHHHHH-----HhcCEEECCCHHHHH----
Confidence 0000000 000 0111222111 235666666654222
Q ss_pred HHHHhc-C-C--ccccccCCCCCCCCCCCCCCCC--C----hhhHhHhhc-CCCCCceEEEEecccccCCHHHHHHHHHH
Q 011724 240 SALHQK-Q-P--TYAIGPIFPAGFTKSLVPTSLW--S----ESECTQWLN-TKPRGSVLYVSFGSYAHASKNDIVEIALG 308 (478)
Q Consensus 240 ~~~~~~-~-p--~~~vGp~~~~~~~~~~~~~~l~--~----~~~~~~~l~-~~~~~~~Vyvs~Gs~~~~~~~~~~~~~~a 308 (478)
..... . + ++.+|....+.... .... + .+++.+.+. -.+++++|+++.+-..+.... +..+++|
T Consensus 180 -~l~~~G~~~~ki~vvGn~~~d~~~~----~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~-~~~ll~A 253 (396)
T 3dzc_A 180 -NLLQENYNAENIFVTGNTVIDALLA----VREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGG-FERICQA 253 (396)
T ss_dssp -HHHHTTCCGGGEEECCCHHHHHHHH----HHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTTH-HHHHHHH
T ss_pred -HHHHcCCCcCcEEEECCcHHHHHHH----hhhhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchhH-HHHHHHH
Confidence 22221 1 2 67777543211000 0000 0 012222222 113456776665221222122 4566666
Q ss_pred HhhC-----CCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccC---hHhhhhccCcceeeeccCchhhHHHH
Q 011724 309 LLLS-----EVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCS---QIDVISHSAIGGFLTHCGWNSIQESI 380 (478)
Q Consensus 309 l~~~-----~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ip---q~~vL~~~~v~~~ItHGG~~s~~Eal 380 (478)
+.+. +.++++.++.++ .+.+.+.+.+...+++.+.++++ ...+++.+++ +|+-.| |.+.||.
T Consensus 254 ~~~l~~~~~~~~~v~~~g~~~-------~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~ 323 (396)
T 3dzc_A 254 LITTAEQHPECQILYPVHLNP-------NVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAP 323 (396)
T ss_dssp HHHHHHHCTTEEEEEECCBCH-------HHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGG
T ss_pred HHHHHHhCCCceEEEEeCCCh-------HHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHH
Confidence 6542 456666544220 01111111111346899877774 4678889999 999987 6667999
Q ss_pred hcCcceeccCcccchhHHHHHhhc------ccCHHHHHHHHHHHhCCCChHHHHHHHH
Q 011724 381 WCSVPLLCFPLLTDQFTNRKLVKS------SITKEEVSEKINRLMSGKSSDELRKNIK 432 (478)
Q Consensus 381 ~~GvP~l~~P~~~DQ~~na~rv~~------~~t~~~l~~~v~~ll~~~~~~~~r~~a~ 432 (478)
++|+|+|+..-..++++. ++. ..++++|.+++.++++ +++.+++..
T Consensus 324 a~G~PvV~~~~~~~~~e~---v~~G~~~lv~~d~~~l~~ai~~ll~---d~~~~~~m~ 375 (396)
T 3dzc_A 324 SLGKPVLVMRETTERPEA---VAAGTVKLVGTNQQQICDALSLLLT---DPQAYQAMS 375 (396)
T ss_dssp GGTCCEEECCSSCSCHHH---HHHTSEEECTTCHHHHHHHHHHHHH---CHHHHHHHH
T ss_pred HcCCCEEEccCCCcchHH---HHcCceEEcCCCHHHHHHHHHHHHc---CHHHHHHHh
Confidence 999999998655554432 222 3368999999999998 776655433
No 31
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.20 E-value=1.2e-08 Score=105.21 Aligned_cols=78 Identities=13% Similarity=0.105 Sum_probs=57.0
Q ss_pred cCCCeEEeeccCh---Hhhhhcc----Ccceeeec----cCchhhHHHHhcCcceeccCcccchhHHHHHhhc-------
Q 011724 343 ISGRGLIVPWCSQ---IDVISHS----AIGGFLTH----CGWNSIQESIWCSVPLLCFPLLTDQFTNRKLVKS------- 404 (478)
Q Consensus 343 ~~~nv~v~~~ipq---~~vL~~~----~v~~~ItH----GG~~s~~Eal~~GvP~l~~P~~~DQ~~na~rv~~------- 404 (478)
+.++|.+.+++|+ ..+++.+ ++ +|.- |-..++.||+++|+|+|+.... .....+.+
T Consensus 333 l~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~----g~~e~v~~~~~g~l~ 406 (499)
T 2r60_A 333 CRGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRNG----GPAEILDGGKYGVLV 406 (499)
T ss_dssp CBTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESSB----HHHHHTGGGTSSEEE
T ss_pred CCceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecCC----CHHHHhcCCceEEEe
Confidence 4678999999975 4578888 88 6632 3346899999999999988642 23333332
Q ss_pred -ccCHHHHHHHHHHHhCCCChHHHHH
Q 011724 405 -SITKEEVSEKINRLMSGKSSDELRK 429 (478)
Q Consensus 405 -~~t~~~l~~~v~~ll~~~~~~~~r~ 429 (478)
.-+.++++++|.++++ +++.++
T Consensus 407 ~~~d~~~la~~i~~ll~---~~~~~~ 429 (499)
T 2r60_A 407 DPEDPEDIARGLLKAFE---SEETWS 429 (499)
T ss_dssp CTTCHHHHHHHHHHHHS---CHHHHH
T ss_pred CCCCHHHHHHHHHHHHh---CHHHHH
Confidence 4578999999999998 665443
No 32
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.17 E-value=1.2e-09 Score=108.69 Aligned_cols=134 Identities=13% Similarity=0.140 Sum_probs=81.2
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhh----C-CCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccC---
Q 011724 283 RGSVLYVSFGSYAHASKNDIVEIALGLLL----S-EVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCS--- 354 (478)
Q Consensus 283 ~~~~Vyvs~Gs~~~~~~~~~~~~~~al~~----~-~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ip--- 354 (478)
++++++++.|....... .+..+++++.+ . +.++++..+.+ ..+.+.+.+.+...++|.+.++++
T Consensus 204 ~~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~-------~~~~~~l~~~~~~~~~v~~~g~~~~~~ 275 (384)
T 1vgv_A 204 DKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLN-------PNVREPVNRILGHVKNVILIDPQEYLP 275 (384)
T ss_dssp TSEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBC-------HHHHHHHHHHHTTCTTEEEECCCCHHH
T ss_pred CCCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCC-------HHHHHHHHHHhhcCCCEEEeCCCCHHH
Confidence 35678888887653222 23445555443 2 44555543322 001111211111236899876665
Q ss_pred hHhhhhccCcceeeeccCchhhHHHHhcCcceeccCcccchhHHHHHhhc---ccCHHHHHHHHHHHhCCCChHHHHHH
Q 011724 355 QIDVISHSAIGGFLTHCGWNSIQESIWCSVPLLCFPLLTDQFTNRKLVKS---SITKEEVSEKINRLMSGKSSDELRKN 430 (478)
Q Consensus 355 q~~vL~~~~v~~~ItHGG~~s~~Eal~~GvP~l~~P~~~DQ~~na~rv~~---~~t~~~l~~~v~~ll~~~~~~~~r~~ 430 (478)
...+++.+++ ||+..| +.+.||+++|+|+|+.+...+.++....-.- ..+.++|+++|.++++ |++.+++
T Consensus 276 ~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e~v~~g~g~lv~~d~~~la~~i~~ll~---d~~~~~~ 348 (384)
T 1vgv_A 276 FVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPEAVTAGTVRLVGTDKQRIVEEVTRLLK---DENEYQA 348 (384)
T ss_dssp HHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHHHHHHTSEEEECSSHHHHHHHHHHHHH---CHHHHHH
T ss_pred HHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcchhhhCCceEEeCCCHHHHHHHHHHHHh---ChHHHhh
Confidence 4668999999 999885 4488999999999999875544432211100 3389999999999998 7655443
No 33
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.17 E-value=2.3e-09 Score=107.66 Aligned_cols=104 Identities=13% Similarity=0.124 Sum_probs=70.4
Q ss_pred CCCeEEeeccC---hHhhhhccCcceeeeccCchhhHHHHhcCcceeccCcccchhHHHHHhhc------ccCHHHHHHH
Q 011724 344 SGRGLIVPWCS---QIDVISHSAIGGFLTHCGWNSIQESIWCSVPLLCFPLLTDQFTNRKLVKS------SITKEEVSEK 414 (478)
Q Consensus 344 ~~nv~v~~~ip---q~~vL~~~~v~~~ItHGG~~s~~Eal~~GvP~l~~P~~~DQ~~na~rv~~------~~t~~~l~~~ 414 (478)
.+++.+.++++ ...+++.+++ +|+-.|. ...||.++|+|+|++|-..++++. ++. ..++++|.++
T Consensus 281 ~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg-~~~EA~a~g~PvV~~~~~~~~~e~---v~~g~~~lv~~d~~~l~~a 354 (403)
T 3ot5_A 281 HERIHLIEPLDAIDFHNFLRKSYL--VFTDSGG-VQEEAPGMGVPVLVLRDTTERPEG---IEAGTLKLIGTNKENLIKE 354 (403)
T ss_dssp CTTEEEECCCCHHHHHHHHHHEEE--EEECCHH-HHHHGGGTTCCEEECCSSCSCHHH---HHHTSEEECCSCHHHHHHH
T ss_pred CCCEEEeCCCCHHHHHHHHHhcCE--EEECCcc-HHHHHHHhCCCEEEecCCCcchhh---eeCCcEEEcCCCHHHHHHH
Confidence 46899999886 4568889998 9988753 236999999999999776666653 222 3489999999
Q ss_pred HHHHhCCCChHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 011724 415 INRLMSGKSSDELRKNIKEVRKKLENALSADGSSQKNFNQFINDVQF 461 (478)
Q Consensus 415 v~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~i~~~~~ 461 (478)
+.++++ +++.+++..+-...+ ..|+++ +.+.+.|..+..
T Consensus 355 i~~ll~---~~~~~~~m~~~~~~~----g~~~aa-~rI~~~l~~~l~ 393 (403)
T 3ot5_A 355 ALDLLD---NKESHDKMAQAANPY----GDGFAA-NRILAAIKSHFE 393 (403)
T ss_dssp HHHHHH---CHHHHHHHHHSCCTT----CCSCHH-HHHHHHHHHHHT
T ss_pred HHHHHc---CHHHHHHHHhhcCcc----cCCcHH-HHHHHHHHHHhC
Confidence 999998 776655443222222 234444 444444544443
No 34
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.11 E-value=2.1e-09 Score=105.14 Aligned_cols=117 Identities=10% Similarity=0.059 Sum_probs=75.4
Q ss_pred EEEEecccccCCHHHHHHHHHHHhhCCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChH---hhhhccC
Q 011724 287 LYVSFGSYAHASKNDIVEIALGLLLSEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQI---DVISHSA 363 (478)
Q Consensus 287 Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~---~vL~~~~ 363 (478)
+++..|... ...-...+++++++.+.+++++-.+. ..+.+ ..+..+ .+++|.+.+|+++. .++..++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~-----~~~~l-~~~~~~--~~~~v~~~g~~~~~~l~~~~~~ad 233 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAW-----EPEYF-DEITRR--YGSTVEPIGEVGGERRLDLLASAH 233 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCC-----CHHHH-HHHHHH--HTTTEEECCCCCHHHHHHHHHHCS
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCcc-----cHHHH-HHHHHH--hCCCEEEeccCCHHHHHHHHHhCC
Confidence 445567765 23335566777777777765553222 00011 122223 45899999999964 7899999
Q ss_pred cceee--ec-----------cC-chhhHHHHhcCcceeccCcccchhHHHHHh----------hcccCHHHHHHHHHHHh
Q 011724 364 IGGFL--TH-----------CG-WNSIQESIWCSVPLLCFPLLTDQFTNRKLV----------KSSITKEEVSEKINRLM 419 (478)
Q Consensus 364 v~~~I--tH-----------GG-~~s~~Eal~~GvP~l~~P~~~DQ~~na~rv----------~~~~t~~~l~~~v~~ll 419 (478)
+ +| +. -| .+++.||+++|+|+|+....+ +...+ ... +.++++++|.+++
T Consensus 234 v--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~----~~e~~~~~~~~~g~~~~~-d~~~l~~~i~~l~ 306 (342)
T 2iuy_A 234 A--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGC----LAEIVPSVGEVVGYGTDF-APDEARRTLAGLP 306 (342)
T ss_dssp E--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTT----HHHHGGGGEEECCSSSCC-CHHHHHHHHHTSC
T ss_pred E--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCC----hHHHhcccCCCceEEcCC-CHHHHHHHHHHHH
Confidence 9 66 22 33 468999999999999987632 22222 114 8999999999998
Q ss_pred C
Q 011724 420 S 420 (478)
Q Consensus 420 ~ 420 (478)
+
T Consensus 307 ~ 307 (342)
T 2iuy_A 307 A 307 (342)
T ss_dssp C
T ss_pred H
Confidence 4
No 35
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.07 E-value=1.7e-07 Score=93.32 Aligned_cols=346 Identities=12% Similarity=0.132 Sum_probs=171.4
Q ss_pred CCEEEEEcCCCc-cCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCCCCC
Q 011724 9 KPHAIAICYPLQ-GHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLPLN 87 (478)
Q Consensus 9 ~~~il~~~~~~~-GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 87 (478)
+.++....+|.. |.-.-...||+.|+++||+|++++......... . ..++.+..++......
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~----~-------------~~~i~~~~~~~~~~~~ 77 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNK----V-------------YPNIYFHEVTVNQYSV 77 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC----C----C-------------CTTEEEECCCCC----
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccc----c-------------CCceEEEecccccccc
Confidence 377888877765 667778889999999999999999864322111 1 1167666554221110
Q ss_pred CCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCch---hhHHHHHHc--CCccEEEecchhHHHHHHHh
Q 011724 88 FDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFFV---WSSMIAKKY--NLVNISFWTEPALVLTLYYH 162 (478)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~~---~~~~~A~~l--giP~v~~~~~~~~~~~~~~~ 162 (478)
.... . ..+.. ...+..+++. .+||+|++..... .+..+...+ ++|+|.........
T Consensus 78 ~~~~-~--~~~~~-----~~~l~~~l~~-----~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~------ 138 (394)
T 2jjm_A 78 FQYP-P--YDLAL-----ASKMAEVAQR-----ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT------ 138 (394)
T ss_dssp CCSC-C--HHHHH-----HHHHHHHHHH-----HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH------
T ss_pred cccc-c--ccHHH-----HHHHHHHHHH-----cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc------
Confidence 1100 0 01111 1123344444 3599999975332 233333344 49988765432210
Q ss_pred hhhhhhcCCCCCCCCCCCccccCCCCCCCCccccchhhhhcCCchHHHHHHHHHhhhhccccEEEecChhhhcHHHHHHH
Q 011724 163 MDLLRSHGHFASTDNREDTIDYIPGVRAIERKDLMSYLQATDTSTVVHRIIQKAFEDVKRVDFILCNTVHELESETISAL 242 (478)
Q Consensus 163 ~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~ 242 (478)
..+... . .....+. .+..++.+++.+....+ ..
T Consensus 139 ----------------------~~~~~~--------~------~~~~~~~------~~~~ad~ii~~s~~~~~-----~~ 171 (394)
T 2jjm_A 139 ----------------------VLGSDP--------S------LNNLIRF------GIEQSDVVTAVSHSLIN-----ET 171 (394)
T ss_dssp ----------------------TTTTCT--------T------THHHHHH------HHHHSSEEEESCHHHHH-----HH
T ss_pred ----------------------ccCCCH--------H------HHHHHHH------HHhhCCEEEECCHHHHH-----HH
Confidence 000000 0 0111111 13467888888866433 22
Q ss_pred HhcC----CccccccCCCCCCCCCCCCCCCCChhhHhHhhcCCCCCceEEEEecccccC-CHHHHHHHHHHHhh-CCCeE
Q 011724 243 HQKQ----PTYAIGPIFPAGFTKSLVPTSLWSESECTQWLNTKPRGSVLYVSFGSYAHA-SKNDIVEIALGLLL-SEVSF 316 (478)
Q Consensus 243 ~~~~----p~~~vGp~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Vyvs~Gs~~~~-~~~~~~~~~~al~~-~~~~~ 316 (478)
.... ++..++..+...... +. +...+.+.+...+ ...+++..|..... ..+.+...+..+.+ .+.++
T Consensus 172 ~~~~~~~~~~~vi~ngv~~~~~~-----~~-~~~~~~~~~~~~~-~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l 244 (394)
T 2jjm_A 172 HELVKPNKDIQTVYNFIDERVYF-----KR-DMTQLKKEYGISE-SEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKL 244 (394)
T ss_dssp HHHTCCSSCEEECCCCCCTTTCC-----CC-CCHHHHHHTTCC----CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEE
T ss_pred HHhhCCcccEEEecCCccHHhcC-----Cc-chHHHHHHcCCCC-CCeEEEEeeccccccCHHHHHHHHHHHHhhCCCEE
Confidence 2211 244444433222111 11 1223333332212 23466677877532 22333233333332 34554
Q ss_pred EEEECCCCCCCCccCCCChhh---hhhhccCCCeEEeeccCh-HhhhhccCcceee----eccCchhhHHHHhcCcceec
Q 011724 317 VWVLRPDIVSSDETDFLPVGF---EEKIKISGRGLIVPWCSQ-IDVISHSAIGGFL----THCGWNSIQESIWCSVPLLC 388 (478)
Q Consensus 317 i~~~~~~~~~~~~~~~l~~~~---~~~~~~~~nv~v~~~ipq-~~vL~~~~v~~~I----tHGG~~s~~Eal~~GvP~l~ 388 (478)
+++ +.+ ...+.+ ..++.+.++|.+.++..+ ..++..+++ +| .-|..+++.||+++|+|+|+
T Consensus 245 ~i~-G~g--------~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~ 313 (394)
T 2jjm_A 245 LLV-GDG--------PEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIG 313 (394)
T ss_dssp EEE-CCC--------TTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEE
T ss_pred EEE-CCc--------hHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEE
Confidence 443 433 111122 222223568888887653 678999999 77 55667899999999999999
Q ss_pred cCccc--chhH--HHHHhhcccCHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 011724 389 FPLLT--DQFT--NRKLVKSSITKEEVSEKINRLMSGKSSDELRKNIKEVRKKLENALSADGSSQKNFNQFINDVQF 461 (478)
Q Consensus 389 ~P~~~--DQ~~--na~rv~~~~t~~~l~~~v~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~i~~~~~ 461 (478)
.+..+ |... ....+...-+.++++++|.++++ +++.+++..+ ..++...+.-+.+..++++++.+.+
T Consensus 314 ~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~---~~~~~~~~~~---~~~~~~~~~~s~~~~~~~~~~~~~~ 384 (394)
T 2jjm_A 314 TRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLK---DEELHRNMGE---RARESVYEQFRSEKIVSQYETIYYD 384 (394)
T ss_dssp ECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHH---CHHHHHHHHH---HHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred ecCCChHHHhhcCCceEEeCCCCHHHHHHHHHHHHc---CHHHHHHHHH---HHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 87532 2111 11111114488999999999998 6654433222 2222111124545556666655554
No 36
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.01 E-value=4.2e-07 Score=89.49 Aligned_cols=132 Identities=14% Similarity=0.199 Sum_probs=82.3
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhCCC----e-EEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccCh-Hhh
Q 011724 285 SVLYVSFGSYAHASKNDIVEIALGLLLSEV----S-FVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQ-IDV 358 (478)
Q Consensus 285 ~~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq-~~v 358 (478)
..+++..|..... .-...+++++..... + -++.+|.+. .+.+ ..+..++.+.++|.+.++..+ ..+
T Consensus 196 ~~~i~~~G~~~~~--K~~~~li~a~~~l~~~~~~~~~l~i~G~g~-----~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~ 267 (374)
T 2iw1_A 196 QNLLLQVGSDFGR--KGVDRSIEALASLPESLRHNTLLFVVGQDK-----PRKF-EALAEKLGVRSNVHFFSGRNDVSEL 267 (374)
T ss_dssp CEEEEEECSCTTT--TTHHHHHHHHHTSCHHHHHTEEEEEESSSC-----CHHH-HHHHHHHTCGGGEEEESCCSCHHHH
T ss_pred CeEEEEeccchhh--cCHHHHHHHHHHhHhccCCceEEEEEcCCC-----HHHH-HHHHHHcCCCCcEEECCCcccHHHH
Confidence 3577778876532 234556667666422 1 334444330 0011 122222224578999988654 678
Q ss_pred hhccCcceeee----ccCchhhHHHHhcCcceeccCcccchhHHHHHhhc---------ccCHHHHHHHHHHHhCCCChH
Q 011724 359 ISHSAIGGFLT----HCGWNSIQESIWCSVPLLCFPLLTDQFTNRKLVKS---------SITKEEVSEKINRLMSGKSSD 425 (478)
Q Consensus 359 L~~~~v~~~It----HGG~~s~~Eal~~GvP~l~~P~~~DQ~~na~rv~~---------~~t~~~l~~~v~~ll~~~~~~ 425 (478)
++.+++ +|. -|..+++.||+++|+|+|+....+ +...+++ .-+.++++++|.++++ ++
T Consensus 268 ~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~---~~ 338 (374)
T 2iw1_A 268 MAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAVCG----YAHYIADANCGTVIAEPFSQEQLNEVLRKALT---QS 338 (374)
T ss_dssp HHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETTST----TTHHHHHHTCEEEECSSCCHHHHHHHHHHHHH---CH
T ss_pred HHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecCCC----chhhhccCCceEEeCCCCCHHHHHHHHHHHHc---Ch
Confidence 999999 775 566789999999999999977632 2233332 2378999999999998 66
Q ss_pred HHHHHHHH
Q 011724 426 ELRKNIKE 433 (478)
Q Consensus 426 ~~r~~a~~ 433 (478)
+.+++..+
T Consensus 339 ~~~~~~~~ 346 (374)
T 2iw1_A 339 PLRMAWAE 346 (374)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 65544433
No 37
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.97 E-value=2.9e-08 Score=98.14 Aligned_cols=77 Identities=21% Similarity=0.271 Sum_probs=57.2
Q ss_pred CCeEEeeccCh---HhhhhccCcceeeeccCchhhHHHHhcCcceeccCcccchhHHHHHhhc------ccCHHHHHHHH
Q 011724 345 GRGLIVPWCSQ---IDVISHSAIGGFLTHCGWNSIQESIWCSVPLLCFPLLTDQFTNRKLVKS------SITKEEVSEKI 415 (478)
Q Consensus 345 ~nv~v~~~ipq---~~vL~~~~v~~~ItHGG~~s~~Eal~~GvP~l~~P~~~DQ~~na~rv~~------~~t~~~l~~~v 415 (478)
++|.+.+++++ ..+++.+++ ||+..| +.+.||+++|+|+|+.......++. +.. ..+.++|++++
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~e~---v~~g~g~~v~~d~~~la~~i 336 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERPEG---IEAGTLKLAGTDEETIFSLA 336 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCHHH---HHTTSEEECCSCHHHHHHHH
T ss_pred CCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCcee---ecCCceEEcCCCHHHHHHHH
Confidence 68999777764 568888999 998873 5588999999999988543333322 222 24899999999
Q ss_pred HHHhCCCChHHHHHH
Q 011724 416 NRLMSGKSSDELRKN 430 (478)
Q Consensus 416 ~~ll~~~~~~~~r~~ 430 (478)
.++++ |++.+++
T Consensus 337 ~~ll~---~~~~~~~ 348 (375)
T 3beo_A 337 DELLS---DKEAHDK 348 (375)
T ss_dssp HHHHH---CHHHHHH
T ss_pred HHHHh---ChHhHhh
Confidence 99998 7765543
No 38
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.94 E-value=1e-08 Score=102.22 Aligned_cols=316 Identities=14% Similarity=0.157 Sum_probs=163.6
Q ss_pred CCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhh-hhhhhcCCCCCcchhccccCCCCCeEEEEc
Q 011724 2 ENNHKKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHH-QITKAQSNGDEDDIFAGARKAGLDIRYATV 80 (478)
Q Consensus 2 ~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (478)
+--|-.-|.|++++. +++-.+.=+-+|.++|.++ ++..++.+....+ ........ ++.+ .-
T Consensus 2 ~~~~~~~~~~~~~v~-GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~~---------------~~~i-~~ 63 (385)
T 4hwg_A 2 AHHHHHHMLKVMTIV-GTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFFD---------------DMGI-RK 63 (385)
T ss_dssp ------CCCEEEEEE-CSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHHC----------------CCC-CC
T ss_pred CccchhhhhheeEEE-EcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHHh---------------hCCC-CC
Confidence 333445678888876 8888888888899999887 9988888877655 22200011 1221 01
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEc--CCchhhHHHHHHcCCccEEEecchhHHHH
Q 011724 81 SDGLPLNFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTD--TFFVWSSMIAKKYNLVNISFWTEPALVLT 158 (478)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D--~~~~~~~~~A~~lgiP~v~~~~~~~~~~~ 158 (478)
|+..- +.. ..++.+.... +...+.++++.. +||+|++- ..+.++..+|.++|||++.+..+
T Consensus 64 ~~~~l-~~~-~~~~~~~~~~----~~~~l~~~l~~~-----kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eag------ 126 (385)
T 4hwg_A 64 PDYFL-EVA-ADNTAKSIGL----VIEKVDEVLEKE-----KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG------ 126 (385)
T ss_dssp CSEEC-CCC-CCCSHHHHHH----HHHHHHHHHHHH-----CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCC------
T ss_pred Cceec-CCC-CCCHHHHHHH----HHHHHHHHHHhc-----CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCC------
Confidence 11000 001 1222222222 223345566664 59999883 33444488999999997665211
Q ss_pred HHHhhhhhhhcCCCCCCCCCCCccccCCCCCCCCccccchhhhhcCCchHHHHHHHHHhhhhccccEEEecChhhhcHHH
Q 011724 159 LYYHMDLLRSHGHFASTDNREDTIDYIPGVRAIERKDLMSYLQATDTSTVVHRIIQKAFEDVKRVDFILCNTVHELESET 238 (478)
Q Consensus 159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~ 238 (478)
+.... ..+ -....+.+.. .-++.+++.+...-+
T Consensus 127 -----------------------------lrs~~-~~~---------pee~nR~~~~-----~~a~~~~~~te~~~~--- 159 (385)
T 4hwg_A 127 -----------------------------NRCFD-QRV---------PEEINRKIID-----HISDVNITLTEHARR--- 159 (385)
T ss_dssp -----------------------------CCCSC-TTS---------THHHHHHHHH-----HHCSEEEESSHHHHH---
T ss_pred -----------------------------Ccccc-ccC---------cHHHHHHHHH-----hhhceeecCCHHHHH---
Confidence 10000 000 0111222211 124455555544222
Q ss_pred HHHHHh-cC-C--ccccccCCCCCCCCCCCCCCCCChhhHhHhhcCCCCCceEEEEecccccCC-HHHHHHHHHHHhhC-
Q 011724 239 ISALHQ-KQ-P--TYAIGPIFPAGFTKSLVPTSLWSESECTQWLNTKPRGSVLYVSFGSYAHAS-KNDIVEIALGLLLS- 312 (478)
Q Consensus 239 ~~~~~~-~~-p--~~~vGp~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Vyvs~Gs~~~~~-~~~~~~~~~al~~~- 312 (478)
.+.. .. + ++.+|-...+.... ..+..+.+++.+.+.-.+ ++.|+++.|...... .+.+..+++++.+.
T Consensus 160 --~l~~~G~~~~~I~vtGnp~~D~~~~---~~~~~~~~~~~~~lgl~~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~ 233 (385)
T 4hwg_A 160 --YLIAEGLPAELTFKSGSHMPEVLDR---FMPKILKSDILDKLSLTP-KQYFLISSHREENVDVKNNLKELLNSLQMLI 233 (385)
T ss_dssp --HHHHTTCCGGGEEECCCSHHHHHHH---HHHHHHHCCHHHHTTCCT-TSEEEEEECCC-----CHHHHHHHHHHHHHH
T ss_pred --HHHHcCCCcCcEEEECCchHHHHHH---hhhhcchhHHHHHcCCCc-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHH
Confidence 2222 11 2 66777533211000 000000122333333222 457888877654322 24456677776653
Q ss_pred ---CCeEEEEECCCCCCCCccCCCChhhhhh---hccCCCeEEeeccC---hHhhhhccCcceeeeccCchhhHHHHhcC
Q 011724 313 ---EVSFVWVLRPDIVSSDETDFLPVGFEEK---IKISGRGLIVPWCS---QIDVISHSAIGGFLTHCGWNSIQESIWCS 383 (478)
Q Consensus 313 ---~~~~i~~~~~~~~~~~~~~~l~~~~~~~---~~~~~nv~v~~~ip---q~~vL~~~~v~~~ItHGG~~s~~Eal~~G 383 (478)
+.++|+..... +.+.+.+. +...+++.+.+.++ ...+++++++ +||-.|. .+.||.++|
T Consensus 234 ~~~~~~vv~p~~p~---------~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG 301 (385)
T 4hwg_A 234 KEYNFLIIFSTHPR---------TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILN 301 (385)
T ss_dssp HHHCCEEEEEECHH---------HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTT
T ss_pred hcCCeEEEEECChH---------HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcC
Confidence 56777765311 10111110 11235788875554 5678999999 9998876 469999999
Q ss_pred cceeccCcccchhHHHHHhhc------ccCHHHHHHHHHHHhC
Q 011724 384 VPLLCFPLLTDQFTNRKLVKS------SITKEEVSEKINRLMS 420 (478)
Q Consensus 384 vP~l~~P~~~DQ~~na~rv~~------~~t~~~l~~~v~~ll~ 420 (478)
+|+|+++-..+-++ + ++. ..++++|.+++.++++
T Consensus 302 ~Pvv~~~~~ter~e-~--v~~G~~~lv~~d~~~i~~ai~~ll~ 341 (385)
T 4hwg_A 302 LPALNIREAHERPE-G--MDAGTLIMSGFKAERVLQAVKTITE 341 (385)
T ss_dssp CCEEECSSSCSCTH-H--HHHTCCEECCSSHHHHHHHHHHHHT
T ss_pred CCEEEcCCCccchh-h--hhcCceEEcCCCHHHHHHHHHHHHh
Confidence 99999987554222 1 322 4589999999999998
No 39
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.85 E-value=2.8e-06 Score=85.18 Aligned_cols=105 Identities=10% Similarity=0.106 Sum_probs=69.3
Q ss_pred cCCCeEEeeccC------hHhhhhccCcceeeecc----CchhhHHHHhcCcceeccCcccchhHHHHHhhc-------c
Q 011724 343 ISGRGLIVPWCS------QIDVISHSAIGGFLTHC----GWNSIQESIWCSVPLLCFPLLTDQFTNRKLVKS-------S 405 (478)
Q Consensus 343 ~~~nv~v~~~ip------q~~vL~~~~v~~~ItHG----G~~s~~Eal~~GvP~l~~P~~~DQ~~na~rv~~-------~ 405 (478)
..++|.+.+|++ ...+++.+++ +|.-. ..+++.||+++|+|+|+.+. ..+...+.+ .
T Consensus 291 ~~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~~~g~l~~ 364 (416)
T 2x6q_A 291 EDYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDGETGFLVR 364 (416)
T ss_dssp TCTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBTTTEEEES
T ss_pred CCCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecCCCeEEEC
Confidence 457999999876 2457888998 77543 45789999999999999765 344444443 4
Q ss_pred cCHHHHHHHHHHHhCCCChHHHHHHHHHH-HHHHHHHHhcCCChHHHHHHHHHHHHh
Q 011724 406 ITKEEVSEKINRLMSGKSSDELRKNIKEV-RKKLENALSADGSSQKNFNQFINDVQF 461 (478)
Q Consensus 406 ~t~~~l~~~v~~ll~~~~~~~~r~~a~~l-~~~~~~a~~~gg~~~~~~~~~i~~~~~ 461 (478)
+.++++++|.++++ +++.+++..+- .+..++ .-+....++++++.+.+
T Consensus 365 -d~~~la~~i~~ll~---~~~~~~~~~~~a~~~~~~----~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 365 -DANEAVEVVLYLLK---HPEVSKEMGAKAKERVRK----NFIITKHMERYLDILNS 413 (416)
T ss_dssp -SHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHH----HTBHHHHHHHHHHHHHT
T ss_pred -CHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHH----HcCHHHHHHHHHHHHHH
Confidence 88999999999998 66554432222 222222 23445555565555543
No 40
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.67 E-value=3e-05 Score=79.29 Aligned_cols=157 Identities=11% Similarity=0.000 Sum_probs=88.9
Q ss_pred eEEEEecccccCC-HHHHHHHHHHHhhCCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeE-EeeccCh--Hhhhhc
Q 011724 286 VLYVSFGSYAHAS-KNDIVEIALGLLLSEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGL-IVPWCSQ--IDVISH 361 (478)
Q Consensus 286 ~Vyvs~Gs~~~~~-~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~-v~~~ipq--~~vL~~ 361 (478)
.+++..|...... .+.+...+..+.+.+.+++++-.+. ....+.+ ..+..+ .++++. +.++... ..+++.
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~---~~~~~~l-~~~~~~--~~~~v~~~~g~~~~~~~~~~~~ 365 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGD---VALEGAL-LAAASR--HHGRVGVAIGYNEPLSHLMQAG 365 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBC---HHHHHHH-HHHHHH--TTTTEEEEESCCHHHHHHHHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCc---hHHHHHH-HHHHHh--CCCcEEEecCCCHHHHHHHHhc
Confidence 3777788876322 3333333333433466766664432 0000001 112222 457887 5688332 367899
Q ss_pred cCcceeee----ccCchhhHHHHhcCcceeccCcccchhHHHHHhh-----------c------ccCHHHHHHHHHHHh-
Q 011724 362 SAIGGFLT----HCGWNSIQESIWCSVPLLCFPLLTDQFTNRKLVK-----------S------SITKEEVSEKINRLM- 419 (478)
Q Consensus 362 ~~v~~~It----HGG~~s~~Eal~~GvP~l~~P~~~DQ~~na~rv~-----------~------~~t~~~l~~~v~~ll- 419 (478)
+++ ||. -|...++.||+++|+|+|+.... .....+. . .-+.++++++|.+++
T Consensus 366 adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~g----g~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~ 439 (485)
T 1rzu_A 366 CDA--IIIPSRFEPCGLTQLYALRYGCIPVVARTG----GLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVR 439 (485)
T ss_dssp CSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHH
T ss_pred CCE--EEECcccCCCCHHHHHHHHCCCCEEEeCCC----ChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHHH
Confidence 999 763 23456899999999999997652 2222221 1 447899999999999
Q ss_pred --CCCChHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcC
Q 011724 420 --SGKSSDELRKNIKEVRKKLENALSADGSSQKNFNQFINDVQFLT 463 (478)
Q Consensus 420 --~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~i~~~~~~~ 463 (478)
+ +++.+++. ++..++ +.-+....++++++-+.+..
T Consensus 440 ~~~---~~~~~~~~---~~~~~~---~~fs~~~~~~~~~~~y~~~~ 476 (485)
T 1rzu_A 440 YYH---DPKLWTQM---QKLGMK---SDVSWEKSAGLYAALYSQLI 476 (485)
T ss_dssp HHT---CHHHHHHH---HHHHHT---CCCBHHHHHHHHHHHHHHHT
T ss_pred HhC---CHHHHHHH---HHHHHH---HhCChHHHHHHHHHHHHHhh
Confidence 6 66544432 222221 34555566666666665543
No 41
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.58 E-value=4.3e-06 Score=90.45 Aligned_cols=106 Identities=7% Similarity=0.072 Sum_probs=62.5
Q ss_pred cCCCeEEeec----cChHhhhh----ccCcceeeec----cCchhhHHHHhcCcceeccCcccchhHHHHHhhc------
Q 011724 343 ISGRGLIVPW----CSQIDVIS----HSAIGGFLTH----CGWNSIQESIWCSVPLLCFPLLTDQFTNRKLVKS------ 404 (478)
Q Consensus 343 ~~~nv~v~~~----ipq~~vL~----~~~v~~~ItH----GG~~s~~Eal~~GvP~l~~P~~~DQ~~na~rv~~------ 404 (478)
+.++|.+.++ +|+.++.. .+++ ||.= |-..++.||+++|+|+|+... ......+.+
T Consensus 638 L~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd~----GG~~EiV~dg~~Gll 711 (816)
T 3s28_A 638 LNGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEIIVHGKSGFH 711 (816)
T ss_dssp CBBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEESS----BTHHHHCCBTTTBEE
T ss_pred CCCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeCC----CChHHHHccCCcEEE
Confidence 5678988884 44455444 4566 7732 334699999999999998643 334444433
Q ss_pred --ccCHHHHHHHHHHHh----CCCChHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 011724 405 --SITKEEVSEKINRLM----SGKSSDELRKNIKEVRKKLENALSADGSSQKNFNQFINDVQ 460 (478)
Q Consensus 405 --~~t~~~l~~~v~~ll----~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~i~~~~ 460 (478)
.-+.++++++|.+++ . |++.+++ +++..++...+.-+-...++.+++-+.
T Consensus 712 v~p~D~e~LA~aI~~lL~~Ll~---d~~~~~~---m~~~ar~~a~~~fSwe~~a~~ll~lY~ 767 (816)
T 3s28_A 712 IDPYHGDQAADTLADFFTKCKE---DPSHWDE---ISKGGLQRIEEKYTWQIYSQRLLTLTG 767 (816)
T ss_dssp ECTTSHHHHHHHHHHHHHHHHH---CTHHHHH---HHHHHHHHHHHSCCHHHHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHHHHHHHhcc---CHHHHHH---HHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 447899999997776 6 4444333 222222222223444555555555443
No 42
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.57 E-value=3.7e-05 Score=80.32 Aligned_cols=107 Identities=15% Similarity=0.156 Sum_probs=69.0
Q ss_pred CCeEEeeccCh---HhhhhccCcceee---eccCchhhHHHHhcCcceeccCcc---cchhHHHHHhhc-------ccCH
Q 011724 345 GRGLIVPWCSQ---IDVISHSAIGGFL---THCGWNSIQESIWCSVPLLCFPLL---TDQFTNRKLVKS-------SITK 408 (478)
Q Consensus 345 ~nv~v~~~ipq---~~vL~~~~v~~~I---tHGG~~s~~Eal~~GvP~l~~P~~---~DQ~~na~rv~~-------~~t~ 408 (478)
++|.+.+++|+ ..++..+++ || .+|+.+++.||+++|+|+|++|-. .|.. +..+.. .-+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~--~~~l~~~g~~e~v~~~~ 509 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVA--GSLNHHLGLDEMNVADD 509 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHH--HHHHHHHTCGGGBCSSH
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHH--HHHHHHCCChhhhcCCH
Confidence 78999999984 456888888 76 236678999999999999997643 2222 111111 2388
Q ss_pred HHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHH--hcCCChHHHHHHHHHHHHh
Q 011724 409 EEVSEKINRLMSGKSSDELRKNIKEVRKKLENAL--SADGSSQKNFNQFINDVQF 461 (478)
Q Consensus 409 ~~l~~~v~~ll~~~~~~~~r~~a~~l~~~~~~a~--~~gg~~~~~~~~~i~~~~~ 461 (478)
+++.+++.++++ |++.+++. ++..++.. .+..+....++.+.+-+.+
T Consensus 510 ~~la~~i~~l~~---~~~~~~~~---~~~~~~~~~~~~~f~~~~~~~~~~~~y~~ 558 (568)
T 2vsy_A 510 AAFVAKAVALAS---DPAALTAL---HARVDVLRRASGVFHMDGFADDFGALLQA 558 (568)
T ss_dssp HHHHHHHHHHHH---CHHHHHHH---HHHHHHHHHHSSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc---CHHHHHHH---HHHHHHhhhcCCCCCHHHHHHHHHHHHHH
Confidence 999999999998 77655543 33333322 2334555555555554443
No 43
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.49 E-value=0.00041 Score=70.75 Aligned_cols=156 Identities=12% Similarity=0.004 Sum_probs=86.8
Q ss_pred eEEEEecccccC-CHHHHHHHHHHHhhCCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeE-EeeccCh--Hhhhhc
Q 011724 286 VLYVSFGSYAHA-SKNDIVEIALGLLLSEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGL-IVPWCSQ--IDVISH 361 (478)
Q Consensus 286 ~Vyvs~Gs~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~-v~~~ipq--~~vL~~ 361 (478)
.+++..|..... ..+.+...+..+.+.+.+++++-.+.. ...+.+ ..+..+ .++++. +.++... ..+++.
T Consensus 293 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~---~~~~~l-~~~~~~--~~~~v~~~~g~~~~~~~~~~~~ 366 (485)
T 2qzs_A 293 PLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDP---VLQEGF-LAAAAE--YPGQVGVQIGYHEAFSHRIMGG 366 (485)
T ss_dssp CEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECH---HHHHHH-HHHHHH--STTTEEEEESCCHHHHHHHHHH
T ss_pred eEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCch---HHHHHH-HHHHHh--CCCcEEEeCCCCHHHHHHHHHh
Confidence 466677776532 223333333333334666666543220 000001 112222 456886 6688432 367899
Q ss_pred cCcceeeec----cCchhhHHHHhcCcceeccCcccchhHHHHHhh-----------c------ccCHHHHHHHHHHHh-
Q 011724 362 SAIGGFLTH----CGWNSIQESIWCSVPLLCFPLLTDQFTNRKLVK-----------S------SITKEEVSEKINRLM- 419 (478)
Q Consensus 362 ~~v~~~ItH----GG~~s~~Eal~~GvP~l~~P~~~DQ~~na~rv~-----------~------~~t~~~l~~~v~~ll- 419 (478)
+++ ||.- |...++.||+++|+|+|+.... .+...+. . .-+.++++++|.+++
T Consensus 367 adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~g----g~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~ 440 (485)
T 2qzs_A 367 ADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRTG----GLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFV 440 (485)
T ss_dssp CSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHH
T ss_pred CCE--EEECCccCCCcHHHHHHHHCCCCEEECCCC----CccceeccCccccccccccceEEECCCCHHHHHHHHHHHHH
Confidence 999 6632 3346889999999999998652 2222221 1 458899999999999
Q ss_pred --CCCChHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 011724 420 --SGKSSDELRKNIKEVRKKLENALSADGSSQKNFNQFINDVQFL 462 (478)
Q Consensus 420 --~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~i~~~~~~ 462 (478)
. |++.+++. ++..++ +.-+-...++++++-+.+.
T Consensus 441 ~~~---~~~~~~~~---~~~~~~---~~fs~~~~~~~~~~ly~~~ 476 (485)
T 2qzs_A 441 LWS---RPSLWRFV---QRQAMA---MDFSWQVAAKSYRELYYRL 476 (485)
T ss_dssp HHT---SHHHHHHH---HHHHHH---CCCCHHHHHHHHHHHHHHH
T ss_pred HcC---CHHHHHHH---HHHHHh---hcCCHHHHHHHHHHHHHHh
Confidence 6 66544432 222222 2456556666666666553
No 44
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.41 E-value=8.3e-05 Score=74.13 Aligned_cols=102 Identities=9% Similarity=0.045 Sum_probs=64.1
Q ss_pred eEEeeccCh---HhhhhccCcceeee----ccCchhhHHHHhcCcceeccCcccchhHHHHHhh----------------
Q 011724 347 GLIVPWCSQ---IDVISHSAIGGFLT----HCGWNSIQESIWCSVPLLCFPLLTDQFTNRKLVK---------------- 403 (478)
Q Consensus 347 v~v~~~ipq---~~vL~~~~v~~~It----HGG~~s~~Eal~~GvP~l~~P~~~DQ~~na~rv~---------------- 403 (478)
+.+.+|+|+ ..+++.+++ +|. -|...++.||+++|+|+|+.... .....+.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v~~~~~~~i~~~~~~~~~ 329 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYFSGDCVYKIKPSAWISVD 329 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHSCTTTSEEECCCEEEECT
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHHccCcccccccccccccc
Confidence 666699984 457888998 663 23346899999999999997653 2222222
Q ss_pred ---------cccCHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 011724 404 ---------SSITKEEVSEKINRLMSGKSSDELRKNIKEVRKKLENALSADGSSQKNFNQFINDVQF 461 (478)
Q Consensus 404 ---------~~~t~~~l~~~v~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~i~~~~~ 461 (478)
..-+.++++++| ++++ +++.+++.. +..++...+.-+.+..++++++-+.+
T Consensus 330 ~~~G~~gl~~~~d~~~la~~i-~l~~---~~~~~~~~~---~~a~~~~~~~fs~~~~~~~~~~~~~~ 389 (413)
T 3oy2_A 330 DRDGIGGIEGIIDVDDLVEAF-TFFK---DEKNRKEYG---KRVQDFVKTKPTWDDISSDIIDFFNS 389 (413)
T ss_dssp TTCSSCCEEEECCHHHHHHHH-HHTT---SHHHHHHHH---HHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred cccCcceeeCCCCHHHHHHHH-HHhc---CHHHHHHHH---HHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 234899999999 9998 766544333 33333222234555555555544443
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.28 E-value=5e-06 Score=72.95 Aligned_cols=132 Identities=11% Similarity=0.042 Sum_probs=85.1
Q ss_pred EEEEecccccCCHHHHHHHHHHHhhC-CCeEEEEECCCCCCCCccCCCChhhhh--hhccCCCeEEeeccCh---Hhhhh
Q 011724 287 LYVSFGSYAHASKNDIVEIALGLLLS-EVSFVWVLRPDIVSSDETDFLPVGFEE--KIKISGRGLIVPWCSQ---IDVIS 360 (478)
Q Consensus 287 Vyvs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~l~~~~~~--~~~~~~nv~v~~~ipq---~~vL~ 360 (478)
+++..|+... ..-+..+++++.+. +.+++++-.+. ..+.+ ..+.. .+.+++||.+.+|+++ ..++.
T Consensus 25 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~-----~~~~l-~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~ 96 (177)
T 2f9f_A 25 FWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFS-----KGDHA-ERYARKIMKIAPDNVKFLGSVSEEELIDLYS 96 (177)
T ss_dssp CEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCC-----TTSTH-HHHHHHHHHHSCTTEEEEESCCHHHHHHHHH
T ss_pred EEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCc-----cHHHH-HHHHHhhhcccCCcEEEeCCCCHHHHHHHHH
Confidence 5566777652 23356677777776 55665554322 11111 11222 2225679999999996 67888
Q ss_pred ccCcceeee---ccCc-hhhHHHHhcCcceeccCcccchhHHHHHhhc-------ccCHHHHHHHHHHHhCCCChHHH-H
Q 011724 361 HSAIGGFLT---HCGW-NSIQESIWCSVPLLCFPLLTDQFTNRKLVKS-------SITKEEVSEKINRLMSGKSSDEL-R 428 (478)
Q Consensus 361 ~~~v~~~It---HGG~-~s~~Eal~~GvP~l~~P~~~DQ~~na~rv~~-------~~t~~~l~~~v~~ll~~~~~~~~-r 428 (478)
.+++ +|. +.|+ .++.||+++|+|+|+... ..+...+++ .-+.++++++|.++++ +++. +
T Consensus 97 ~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~~~g~~~~~d~~~l~~~i~~l~~---~~~~~~ 167 (177)
T 2f9f_A 97 RCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINEKTGYLVNADVNEIIDAMKKVSK---NPDKFK 167 (177)
T ss_dssp HCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBTTTEEEECSCHHHHHHHHHHHHH---CTTTTH
T ss_pred hCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCCCccEEeCCCHHHHHHHHHHHHh---CHHHHH
Confidence 9999 665 3344 599999999999998764 344444433 4688999999999998 4443 5
Q ss_pred HHHHHHH
Q 011724 429 KNIKEVR 435 (478)
Q Consensus 429 ~~a~~l~ 435 (478)
+++++.+
T Consensus 168 ~~~~~~a 174 (177)
T 2f9f_A 168 KDCFRRA 174 (177)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555443
No 46
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.24 E-value=0.00013 Score=73.00 Aligned_cols=74 Identities=9% Similarity=0.065 Sum_probs=53.6
Q ss_pred cCCCeEEeeccChH---hhhhccCcceeee---ccCc-hhhHHHH-------hcCcceeccCcccchhHHHHHh-hcccC
Q 011724 343 ISGRGLIVPWCSQI---DVISHSAIGGFLT---HCGW-NSIQESI-------WCSVPLLCFPLLTDQFTNRKLV-KSSIT 407 (478)
Q Consensus 343 ~~~nv~v~~~ipq~---~vL~~~~v~~~It---HGG~-~s~~Eal-------~~GvP~l~~P~~~DQ~~na~rv-~~~~t 407 (478)
+.+||.+.+++|+. .+++.+++ +|. +-|+ +++.||+ ++|+|+|+... .....|+ .+ ...-+
T Consensus 263 l~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~-v~~~~~G-~l~v~~~d 338 (406)
T 2hy7_A 263 YGDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA-VVGPYKS-RFGYTPGN 338 (406)
T ss_dssp CCTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG-GTCSCSS-EEEECTTC
T ss_pred CCCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh-cccCcce-EEEeCCCC
Confidence 56799999999864 47888998 663 3344 6789999 99999999876 1111122 12 22347
Q ss_pred HHHHHHHHHHHhC
Q 011724 408 KEEVSEKINRLMS 420 (478)
Q Consensus 408 ~~~l~~~v~~ll~ 420 (478)
.++++++|.++++
T Consensus 339 ~~~la~ai~~ll~ 351 (406)
T 2hy7_A 339 ADSVIAAITQALE 351 (406)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 8999999999998
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.06 E-value=0.0018 Score=63.79 Aligned_cols=93 Identities=14% Similarity=0.214 Sum_probs=65.6
Q ss_pred CCeEEeeccC-hHhhhhccCcceeeec-----cCchhhHHHHhcCcceeccCcccchhHHHHHhhc------ccCHHHHH
Q 011724 345 GRGLIVPWCS-QIDVISHSAIGGFLTH-----CGWNSIQESIWCSVPLLCFPLLTDQFTNRKLVKS------SITKEEVS 412 (478)
Q Consensus 345 ~nv~v~~~ip-q~~vL~~~~v~~~ItH-----GG~~s~~Eal~~GvP~l~~P~~~DQ~~na~rv~~------~~t~~~l~ 412 (478)
.++++.++.. -..+++.+++ ++.- +|..++.||+++|+|+|+-|...+.++....+.. .-+.++|+
T Consensus 260 ~~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~~La 337 (374)
T 2xci_A 260 GDVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETELV 337 (374)
T ss_dssp SSEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEEECCSHHHHH
T ss_pred CcEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEEEeCCHHHHH
Confidence 3567767654 4668888888 6642 2447899999999999988877777766655432 34789999
Q ss_pred HHHHHHhCCCChHHHHHHHHHHHHHHH
Q 011724 413 EKINRLMSGKSSDELRKNIKEVRKKLE 439 (478)
Q Consensus 413 ~~v~~ll~~~~~~~~r~~a~~l~~~~~ 439 (478)
+++.++++++...++.+++++..+.-.
T Consensus 338 ~ai~~ll~d~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 338 TKLTELLSVKKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp HHHHHHHHSCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHhcc
Confidence 999999973112456677766655543
No 48
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.82 E-value=0.0012 Score=64.45 Aligned_cols=111 Identities=14% Similarity=0.056 Sum_probs=77.3
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeE-EEE
Q 011724 3 NNHKKPKPHAIAICYPLQGHVIPFVNLALKLASS--GFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIR-YAT 79 (478)
Q Consensus 3 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~ 79 (478)
|+..-.++||+++-..+.|++.-..++.+.|+++ +.+|++++.+.+.+.++ .. +.+. ++.
T Consensus 2 ~~~~l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~---~~--------------p~vd~vi~ 64 (349)
T 3tov_A 2 NAMELDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVME---YN--------------PNIDELIV 64 (349)
T ss_dssp CSCCCTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTS---SC--------------TTCSEEEE
T ss_pred CCcCCCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHh---cC--------------CCccEEEE
Confidence 3344567999999999999999999999999986 99999999999988887 44 1443 444
Q ss_pred cCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCc-cEEEEcCCchhhHHHHHHcCCccEEE
Q 011724 80 VSDGLPLNFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEM-NCLVTDTFFVWSSMIAKKYNLVNISF 149 (478)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~p-D~vi~D~~~~~~~~~A~~lgiP~v~~ 149 (478)
++.. . ....+.. +..+++.++. .++ |++|.=....-...++...|+|...-
T Consensus 65 ~~~~--------~-~~~~~~~--------~~~l~~~Lr~--~~y~D~vidl~~~~rs~~l~~~~~a~~riG 116 (349)
T 3tov_A 65 VDKK--------G-RHNSISG--------LNEVAREINA--KGKTDIVINLHPNERTSYLAWKIHAPITTG 116 (349)
T ss_dssp ECCS--------S-HHHHHHH--------HHHHHHHHHH--HCCCCEEEECCCSHHHHHHHHHHCCSEEEE
T ss_pred eCcc--------c-ccccHHH--------HHHHHHHHhh--CCCCeEEEECCCChHHHHHHHHhCCCeEEe
Confidence 4321 0 0111111 2234455553 469 99997665666677888899987553
No 49
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.60 E-value=0.0068 Score=58.71 Aligned_cols=104 Identities=10% Similarity=0.010 Sum_probs=70.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCe-EEEEcCCCCCC
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASS--GFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDI-RYATVSDGLPL 86 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~ 86 (478)
|||+++.....|++.-..++.+.|+++ +.+|++++.+.+.+.++ .. + .+ +++.++.. .
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~---~~--------p------~i~~v~~~~~~--~ 61 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLS---RM--------P------EVNEAIPMPLG--H 61 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHT---TC--------T------TEEEEEEC------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHh---cC--------C------ccCEEEEecCC--c
Confidence 699999988889999999999999986 99999999998888776 43 1 34 34444311 0
Q ss_pred CCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCchhhHHHHHHcCCccEEE
Q 011724 87 NFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFFVWSSMIAKKYNLVNISF 149 (478)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~~~~~~~A~~lgiP~v~~ 149 (478)
. ... + ..+..+.+.++. .++|++|.-....-...++...|+|....
T Consensus 62 ~---~~~----~--------~~~~~l~~~l~~--~~~D~vid~~~~~~sa~~~~~~~~~~~ig 107 (348)
T 1psw_A 62 G---ALE----I--------GERRKLGHSLRE--KRYDRAYVLPNSFKSALVPLFAGIPHRTG 107 (348)
T ss_dssp ------C----H--------HHHHHHHHHTTT--TTCSEEEECSCCSGGGHHHHHTTCSEEEE
T ss_pred c---ccc----h--------HHHHHHHHHHHh--cCCCEEEECCCChHHHHHHHHhCCCEEec
Confidence 0 000 1 122345566664 57999983333355667888899997443
No 50
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.57 E-value=0.00057 Score=58.58 Aligned_cols=128 Identities=9% Similarity=0.141 Sum_probs=75.8
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhCC----CeEEEEECCCCCCCCccCCCChhhhhhh-ccCCCeEEeeccChH---
Q 011724 285 SVLYVSFGSYAHASKNDIVEIALGLLLSE----VSFVWVLRPDIVSSDETDFLPVGFEEKI-KISGRGLIVPWCSQI--- 356 (478)
Q Consensus 285 ~~Vyvs~Gs~~~~~~~~~~~~~~al~~~~----~~~i~~~~~~~~~~~~~~~l~~~~~~~~-~~~~nv~v~~~ipq~--- 356 (478)
+++++..|..... .-...+++++.... .+++ .++.+ ...+.+.+.. +.+.++.+ +|+|+.
T Consensus 2 ~~~i~~~G~~~~~--Kg~~~li~a~~~l~~~~~~~l~-i~G~g--------~~~~~~~~~~~~~~~~v~~-g~~~~~~~~ 69 (166)
T 3qhp_A 2 PFKIAMVGRYSNE--KNQSVLIKAVALSKYKQDIVLL-LKGKG--------PDEKKIKLLAQKLGVKAEF-GFVNSNELL 69 (166)
T ss_dssp CEEEEEESCCSTT--TTHHHHHHHHHTCTTGGGEEEE-EECCS--------TTHHHHHHHHHHHTCEEEC-CCCCHHHHH
T ss_pred ceEEEEEeccchh--cCHHHHHHHHHHhccCCCeEEE-EEeCC--------ccHHHHHHHHHHcCCeEEE-eecCHHHHH
Confidence 4677888887532 23455666666542 2333 33322 1112222211 13347888 999863
Q ss_pred hhhhccCcceeee----ccCchhhHHHHhcCc-ceeccCc---ccchhHHHHHhhcccCHHHHHHHHHHHhCCCChHHHH
Q 011724 357 DVISHSAIGGFLT----HCGWNSIQESIWCSV-PLLCFPL---LTDQFTNRKLVKSSITKEEVSEKINRLMSGKSSDELR 428 (478)
Q Consensus 357 ~vL~~~~v~~~It----HGG~~s~~Eal~~Gv-P~l~~P~---~~DQ~~na~rv~~~~t~~~l~~~v~~ll~~~~~~~~r 428 (478)
.++..+++ +|. -|...++.||+++|+ |+|+... ..|-..+...+...-+.+++.++|.+++. +++.+
T Consensus 70 ~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~---~~~~~ 144 (166)
T 3qhp_A 70 EILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERSLFEPNNAKDLSAKIDWWLE---NKLER 144 (166)
T ss_dssp HHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGGEECTTCHHHHHHHHHHHHH---CHHHH
T ss_pred HHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCceEEcCCCHHHHHHHHHHHHh---CHHHH
Confidence 57888888 765 244469999999996 9999332 22222221112336689999999999998 66544
Q ss_pred H
Q 011724 429 K 429 (478)
Q Consensus 429 ~ 429 (478)
+
T Consensus 145 ~ 145 (166)
T 3qhp_A 145 E 145 (166)
T ss_dssp H
T ss_pred H
Confidence 4
No 51
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.32 E-value=0.0027 Score=68.11 Aligned_cols=137 Identities=16% Similarity=0.238 Sum_probs=89.6
Q ss_pred CCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEECCCCCCCCccCCCChhhhhh-hccCCCeEEeeccChHh---
Q 011724 282 PRGSVLYVSFGSYAHASKNDIVEIALGLLLSEVSFVWVLRPDIVSSDETDFLPVGFEEK-IKISGRGLIVPWCSQID--- 357 (478)
Q Consensus 282 ~~~~~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~-~~~~~nv~v~~~ipq~~--- 357 (478)
++..++|.||.......++.+..-+.-|++.+.-++|......... ..+-..+... + .++++.+.+..|..+
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~---~~l~~~~~~~gi-~~~r~~f~~~~~~~~~l~ 595 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE---PNIQQYAQNMGL-PQNRIIFSPVAPKEEHVR 595 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGH---HHHHHHHHHTTC-CGGGEEEEECCCHHHHHH
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHH---HHHHHHHHhcCC-CcCeEEECCCCCHHHHHH
Confidence 3456999999999999999999999999999998888876441000 0010111110 1 245788888888544
Q ss_pred hhhccCcceeee---ccCchhhHHHHhcCcceeccCcccchhHHHHHhhc------------ccCHHHHHHHHHHHhCCC
Q 011724 358 VISHSAIGGFLT---HCGWNSIQESIWCSVPLLCFPLLTDQFTNRKLVKS------------SITKEEVSEKINRLMSGK 422 (478)
Q Consensus 358 vL~~~~v~~~It---HGG~~s~~Eal~~GvP~l~~P~~~DQ~~na~rv~~------------~~t~~~l~~~v~~ll~~~ 422 (478)
.+..+|+ ++- .+|.+|++|||+.|||+|.++- ++ .+.|+.. .-+.++-.+.-.++-.
T Consensus 596 ~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g--~~--~~sR~~~s~l~~~gl~e~ia~~~~~Y~~~a~~la~-- 667 (723)
T 4gyw_A 596 RGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPG--ET--LASRVAASQLTCLGCLELIAKNRQEYEDIAVKLGT-- 667 (723)
T ss_dssp HGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCC--SS--GGGTHHHHHHHHHTCGGGBCSSHHHHHHHHHHHHH--
T ss_pred HhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccC--CC--ccHhHHHHHHHHcCCcccccCCHHHHHHHHHHHhc--
Confidence 4456666 765 8999999999999999999994 22 2333322 4455555555555555
Q ss_pred ChHHHHHHH
Q 011724 423 SSDELRKNI 431 (478)
Q Consensus 423 ~~~~~r~~a 431 (478)
|++.++..
T Consensus 668 -d~~~l~~l 675 (723)
T 4gyw_A 668 -DLEYLKKV 675 (723)
T ss_dssp -CHHHHHHH
T ss_pred -CHHHHHHH
Confidence 55544443
No 52
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.19 E-value=0.0053 Score=63.66 Aligned_cols=133 Identities=11% Similarity=0.057 Sum_probs=89.9
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEE--ECCCCCCCCccCCCChhhhh---hhccCCCeEEeeccChHh-
Q 011724 284 GSVLYVSFGSYAHASKNDIVEIALGLLLSEVSFVWV--LRPDIVSSDETDFLPVGFEE---KIKISGRGLIVPWCSQID- 357 (478)
Q Consensus 284 ~~~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~--~~~~~~~~~~~~~l~~~~~~---~~~~~~nv~v~~~ipq~~- 357 (478)
+.++|.||+......++.++....-+++.+..++|. .+... .....+.. +..+.+++.+.+.+|+.+
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~-------g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~ 512 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN-------GITHPYVERFIKSYLGDSATAHPHSPYHQY 512 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC-------GGGHHHHHHHHHHHHGGGEEEECCCCHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc-------hhhHHHHHHHHHcCCCccEEEcCCCCHHHH
Confidence 368999999988888999999999998888777764 33220 01111111 111346788889998654
Q ss_pred --hhhccCcceee---eccCchhhHHHHhcCcceeccCcccchhHHHHHhhc-------------ccCHHHHHHHHHHHh
Q 011724 358 --VISHSAIGGFL---THCGWNSIQESIWCSVPLLCFPLLTDQFTNRKLVKS-------------SITKEEVSEKINRLM 419 (478)
Q Consensus 358 --vL~~~~v~~~I---tHGG~~s~~Eal~~GvP~l~~P~~~DQ~~na~rv~~-------------~~t~~~l~~~v~~ll 419 (478)
.+..+|+ |+ ..+|..|++||+++|||+|+++-- ..+.|+.. .-+.++..+...++.
T Consensus 513 la~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~----~~asRvgaSlL~~~GLpE~LIA~d~eeYv~~Av~La 586 (631)
T 3q3e_A 513 LRILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGA----EVHEHIDEGLFKRLGLPEWLIANTVDEYVERAVRLA 586 (631)
T ss_dssp HHHHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCS----SHHHHHHHHHHHHTTCCGGGEESSHHHHHHHHHHHH
T ss_pred HHHHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCC----cHHHHhHHHHHHhcCCCcceecCCHHHHHHHHHHHh
Confidence 4477877 65 347889999999999999998753 12333321 246788888888888
Q ss_pred CCCChHHHHHHHH
Q 011724 420 SGKSSDELRKNIK 432 (478)
Q Consensus 420 ~~~~~~~~r~~a~ 432 (478)
+ |++.+++.+
T Consensus 587 ~---D~~~l~~LR 596 (631)
T 3q3e_A 587 E---NHQERLELR 596 (631)
T ss_dssp H---CHHHHHHHH
T ss_pred C---CHHHHHHHH
Confidence 8 766555443
No 53
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=97.19 E-value=0.014 Score=56.10 Aligned_cols=127 Identities=13% Similarity=0.006 Sum_probs=76.1
Q ss_pred CCceEEEEecccc---cCCHHHHHHHHHHHhhCCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccC---hH
Q 011724 283 RGSVLYVSFGSYA---HASKNDIVEIALGLLLSEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCS---QI 356 (478)
Q Consensus 283 ~~~~Vyvs~Gs~~---~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ip---q~ 356 (478)
+++.|.+..|+.. ..+.+.+.++++.|.+.+.++++..++. .+ ..+.+...+. . +++.+.+-.+ -.
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~----~e-~~~~~~i~~~--~-~~~~l~g~~sl~el~ 248 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAP----HE-EERAKRLAEG--F-AYVEVLPKMSLEGVA 248 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSH----HH-HHHHHHHHTT--C-TTEEECCCCCHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCH----HH-HHHHHHHHhh--C-CcccccCCCCHHHHH
Confidence 3567888888764 4567788888888877777776654422 00 0000111111 2 2444443322 36
Q ss_pred hhhhccCcceeeeccCchhhHHHHhcCcceecc--Ccccch--hH--HHH------HhhcccCHHHHHHHHHHHhC
Q 011724 357 DVISHSAIGGFLTHCGWNSIQESIWCSVPLLCF--PLLTDQ--FT--NRK------LVKSSITKEEVSEKINRLMS 420 (478)
Q Consensus 357 ~vL~~~~v~~~ItHGG~~s~~Eal~~GvP~l~~--P~~~DQ--~~--na~------rv~~~~t~~~l~~~v~~ll~ 420 (478)
++++++++ +|+.- .|.++=|.+.|+|+|++ |..... |. +.. .+.+.++.+++.+++.++|+
T Consensus 249 ali~~a~l--~I~~D-SG~~HlAaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~ 321 (326)
T 2gt1_A 249 RVLAGAKF--VVSVD-TGLSHLTAALDRPNITVYGPTDPGLIGGYGKNQMVCRAPGNELSQLTANAVKQFIEENAE 321 (326)
T ss_dssp HHHHTCSE--EEEES-SHHHHHHHHTTCCEEEEESSSCHHHHCCCSSSEEEEECGGGCGGGCCHHHHHHHHHHTTT
T ss_pred HHHHhCCE--EEecC-CcHHHHHHHcCCCEEEEECCCChhhcCCCCCCceEecCCcccccCCCHHHHHHHHHHHHH
Confidence 78999999 99983 33344477799999988 331111 10 000 11127899999999999997
No 54
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=96.75 E-value=0.019 Score=50.33 Aligned_cols=69 Identities=7% Similarity=0.019 Sum_probs=51.7
Q ss_pred CeEE-eeccCh---HhhhhccCcceeeecc---C-chhhHHHHhcCcceeccCcccchhHHHHHhhc-------ccCHHH
Q 011724 346 RGLI-VPWCSQ---IDVISHSAIGGFLTHC---G-WNSIQESIWCSVPLLCFPLLTDQFTNRKLVKS-------SITKEE 410 (478)
Q Consensus 346 nv~v-~~~ipq---~~vL~~~~v~~~ItHG---G-~~s~~Eal~~GvP~l~~P~~~DQ~~na~rv~~-------~~t~~~ 410 (478)
+|.+ .+++++ ..++..+++ +|.-. | ..++.||+++|+|+|+.... .+...+.. .-+.++
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~~~~~g~~~~~~~~~~ 169 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDIITNETGILVKAGDPGE 169 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHCCTTTCEEECTTCHHH
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHcCCCceEEecCCCHHH
Confidence 8999 999984 467888888 66422 3 46899999999999987653 33333311 348899
Q ss_pred HHHHHHHHhC
Q 011724 411 VSEKINRLMS 420 (478)
Q Consensus 411 l~~~v~~ll~ 420 (478)
+.++|.++++
T Consensus 170 l~~~i~~l~~ 179 (200)
T 2bfw_A 170 LANAILKALE 179 (200)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999985
No 55
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.00 E-value=0.0078 Score=58.33 Aligned_cols=107 Identities=12% Similarity=0.122 Sum_probs=70.7
Q ss_pred cCCCeEEeeccChHhh---hhccCcceeeeccCc---------hhhHHHHhcCcceeccCcccchhHHHHHhhc------
Q 011724 343 ISGRGLIVPWCSQIDV---ISHSAIGGFLTHCGW---------NSIQESIWCSVPLLCFPLLTDQFTNRKLVKS------ 404 (478)
Q Consensus 343 ~~~nv~v~~~ipq~~v---L~~~~v~~~ItHGG~---------~s~~Eal~~GvP~l~~P~~~DQ~~na~rv~~------ 404 (478)
.+ ||...+|+|+.++ |+.++.+++.+-+.. +-+.|++++|+|+|+.+. ..++..+++
T Consensus 213 l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~----~~~~~~v~~~~~G~~ 287 (339)
T 3rhz_A 213 PQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEG----IANQELIENNGLGWI 287 (339)
T ss_dssp CT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETT----CTTTHHHHHHTCEEE
T ss_pred cC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccC----hhHHHHHHhCCeEEE
Confidence 55 9999999998665 445566555533322 347899999999998653 344445544
Q ss_pred ccCHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 011724 405 SITKEEVSEKINRLMSGKSSDELRKNIKEVRKKLENALSADGSSQKNFNQFINDV 459 (478)
Q Consensus 405 ~~t~~~l~~~v~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~i~~~ 459 (478)
.-+.+++.+++.++.. ++..++++|+++.++++++ |--..+.+.+.+.++
T Consensus 288 ~~~~~e~~~~i~~l~~-~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 288 VKDVEEAIMKVKNVNE-DEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQA 337 (339)
T ss_dssp ESSHHHHHHHHHHCCH-HHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHh
Confidence 2356888888888653 2246788999999888875 444444454444443
No 56
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=95.13 E-value=0.037 Score=50.68 Aligned_cols=119 Identities=10% Similarity=0.047 Sum_probs=64.8
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEc
Q 011724 1 MENNHKKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATV 80 (478)
Q Consensus 1 ~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (478)
|++. ++++||||+.-=-|. |.--+.+|++.|++ +|+|+++.+...+.-... +......+++..+
T Consensus 4 ~~~~-~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g~-------------siTl~~pl~~~~~ 67 (261)
T 3ty2_A 4 MKKT-ATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGASN-------------SLTLNAPLHIKNL 67 (261)
T ss_dssp --------CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCTT-------------CCCCSSCEEEEEC
T ss_pred hhhc-cCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCccc-------------ceecCCCeEEEEe
Confidence 4443 566699988764343 45557789999977 899999999887766541 1122335676665
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCC---------chh----hHHHHHHcCCccE
Q 011724 81 SDGLPLNFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTF---------FVW----SSMIAKKYNLVNI 147 (478)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~---------~~~----~~~~A~~lgiP~v 147 (478)
.++. ..-......-....+ ..++ . .+||+||+... .++ +..-|..+|||.|
T Consensus 68 ~~~~---~~v~GTPaDCV~lal-------~~l~---~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaI 131 (261)
T 3ty2_A 68 ENGM---ISVEGTPTDCVHLAI-------TGVL---P---EMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPAL 131 (261)
T ss_dssp TTSC---EEESSCHHHHHHHHT-------TTTS---S---SCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEE
T ss_pred cCCe---EEECCCHHHHHHHHH-------HHhc---C---CCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeE
Confidence 4321 111223333333221 1121 1 46999998531 122 2233456689999
Q ss_pred EEec
Q 011724 148 SFWT 151 (478)
Q Consensus 148 ~~~~ 151 (478)
.++.
T Consensus 132 A~S~ 135 (261)
T 3ty2_A 132 AVSL 135 (261)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 9974
No 57
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=94.93 E-value=0.5 Score=48.60 Aligned_cols=158 Identities=13% Similarity=0.084 Sum_probs=87.6
Q ss_pred EEEEecccccC-CHHHHHHHHHHHhhCCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccCh---Hhhhhcc
Q 011724 287 LYVSFGSYAHA-SKNDIVEIALGLLLSEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQ---IDVISHS 362 (478)
Q Consensus 287 Vyvs~Gs~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq---~~vL~~~ 362 (478)
+++..|..... ..+.+...+..+.+.+.+++++..+.. ..+..-...... .+.++.+....+. ..+++.+
T Consensus 329 ~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~----~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~a 402 (536)
T 3vue_A 329 LIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKK----KFEKLLKSMEEK--YPGKVRAVVKFNAPLAHLIMAGA 402 (536)
T ss_dssp EEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCH----HHHHHHHHHHHH--STTTEEEECSCCHHHHHHHHHHC
T ss_pred EEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCc----hHHHHHHHHHhh--cCCceEEEEeccHHHHHHHHHhh
Confidence 55556766532 233333334444445677766654430 000000111222 6778888877765 3478888
Q ss_pred Ccceeeec---cCc-hhhHHHHhcCcceeccCcccchhHHHHHhhc------------------ccCHHHHHHHHHHHhC
Q 011724 363 AIGGFLTH---CGW-NSIQESIWCSVPLLCFPLLTDQFTNRKLVKS------------------SITKEEVSEKINRLMS 420 (478)
Q Consensus 363 ~v~~~ItH---GG~-~s~~Eal~~GvP~l~~P~~~DQ~~na~rv~~------------------~~t~~~l~~~v~~ll~ 420 (478)
++ ||.= =|+ .+++||+++|+|+|+.... .....|.+ ..+.++|+++|++++.
T Consensus 403 D~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 403 DV--LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp SE--EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred he--eecccccCCCCHHHHHHHHcCCCEEEcCCC----CchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHH
Confidence 88 7642 233 4889999999999987652 22333322 3357889999988874
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcC
Q 011724 421 GKSSDELRKNIKEVRKKLENALSADGSSQKNFNQFINDVQFLT 463 (478)
Q Consensus 421 ~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~i~~~~~~~ 463 (478)
.-+++.++ ++.+++++..-|=...+++..+-+.+++
T Consensus 477 ~~~~~~~~-------~~~~~am~~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 477 VVGTPAYE-------EMVRNCMNQDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp HTTSHHHH-------HHHHHHHHSCCSSHHHHHHHHHHHHTTC
T ss_pred hcCcHHHH-------HHHHHHHHhcCCHHHHHHHHHHHHHHhh
Confidence 11134332 2333444444554555666666666654
No 58
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=94.31 E-value=0.21 Score=45.55 Aligned_cols=114 Identities=9% Similarity=0.040 Sum_probs=67.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCCCCCC
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLPLNF 88 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 88 (478)
|||||+.-=-|. |.--+.+|++.|++.| +|+++.+...+.-... +......+++..+..... .
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~-------------sit~~~pl~~~~~~~~~~--~ 63 (251)
T 2phj_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGH-------------SLTFTEPLKMRKIDTDFY--T 63 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCC-------------SCCCSSCEEEEEEETTEE--E
T ss_pred CCEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCcc-------------ceecCCCeEEEEecCCCe--E
Confidence 589888763333 4455788999999988 9999999887766641 112223566665543210 1
Q ss_pred CCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcC----------Cc---hhhHHHHHHcCCccEEEec
Q 011724 89 DRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDT----------FF---VWSSMIAKKYNLVNISFWT 151 (478)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~----------~~---~~~~~~A~~lgiP~v~~~~ 151 (478)
.-......-....+ ..++. . .+||+||+-. .+ .++..-|..+|||.|.++.
T Consensus 64 ~v~GTPaDCV~lal-------~~l~~---~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 64 VIDGTPADCVHLGY-------RVILE---E--KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp ETTCCHHHHHHHHH-------HTTTT---T--CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred EECCCHHHHHHHHH-------HHhcC---C--CCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 11233333333221 12221 1 3699999842 11 3455667888999999974
No 59
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=93.37 E-value=0.2 Score=49.74 Aligned_cols=82 Identities=12% Similarity=-0.046 Sum_probs=52.5
Q ss_pred cCCCeEEeeccChH---hhhhccCcceeee--c-cCc-hhhHHHHhcCcceeccCccc--chhHH--HHHhhcccCHHHH
Q 011724 343 ISGRGLIVPWCSQI---DVISHSAIGGFLT--H-CGW-NSIQESIWCSVPLLCFPLLT--DQFTN--RKLVKSSITKEEV 411 (478)
Q Consensus 343 ~~~nv~v~~~ipq~---~vL~~~~v~~~It--H-GG~-~s~~Eal~~GvP~l~~P~~~--DQ~~n--a~rv~~~~t~~~l 411 (478)
...+|.+.+++|+. .+++.+++ ||. . =|. .++.||+++|+|+|+- ..+ |--.+ ...+...-+.+++
T Consensus 293 ~~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g~~e~v~~~~~G~lv~~~d~~~l 369 (413)
T 2x0d_A 293 KGIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVITN-KYENKDLSNWHSNIVSLEQLNPENI 369 (413)
T ss_dssp TTEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEEE-CBTTBCGGGTBTTEEEESSCSHHHH
T ss_pred CcCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEEe-CCCcchhhhcCCCEEEeCCCCHHHH
Confidence 44678899999864 57888898 764 2 133 5689999999999972 211 11100 0111115678999
Q ss_pred HHHHHHHhCCCChHHHHHH
Q 011724 412 SEKINRLMSGKSSDELRKN 430 (478)
Q Consensus 412 ~~~v~~ll~~~~~~~~r~~ 430 (478)
+++|.++++ |++.+++
T Consensus 370 a~ai~~ll~---~~~~~~~ 385 (413)
T 2x0d_A 370 AETLVELCM---SFNNRDV 385 (413)
T ss_dssp HHHHHHHHH---HTC----
T ss_pred HHHHHHHHc---CHHHHHH
Confidence 999999998 6665554
No 60
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=91.04 E-value=0.13 Score=53.12 Aligned_cols=46 Identities=15% Similarity=0.257 Sum_probs=28.9
Q ss_pred CCCCCCCCCCEEEEEcC---CC---ccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 1 MENNHKKPKPHAIAICY---PL---QGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 1 ~~~~~~~~~~~il~~~~---~~---~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
|+..+....|||++++. |. .|=-.-.-+|+++|+++||+|+++++.
T Consensus 1 ~~~~~~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 1 MAHHHHHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp -------CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCcccCCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 67776667799999972 31 122233557999999999999999853
No 61
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=90.51 E-value=1.9 Score=39.37 Aligned_cols=114 Identities=10% Similarity=0.018 Sum_probs=63.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCCCCCC
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLPLNF 88 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 88 (478)
|.|||+.-=-|. +---+.+|++.|.+.| +|+++.+...+.-+- . +......+++........ .
T Consensus 1 Mp~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g----~---------siT~~~pl~~~~~~~~~~--~ 63 (251)
T 2wqk_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVG----H---------SLTFTEPLKMRKIDTDFY--T 63 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSC----C---------SCCCSSCEEEEEEETTEE--E
T ss_pred CCEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccc----c---------CcCCCCCceeEEeeccce--e
Confidence 567777642222 3334667999999999 599888887665553 1 112233566655432100 0
Q ss_pred CCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcC----------C---chhhHHHHHHcCCccEEEec
Q 011724 89 DRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDT----------F---FVWSSMIAKKYNLVNISFWT 151 (478)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~----------~---~~~~~~~A~~lgiP~v~~~~ 151 (478)
.-......-.... +..+ +.+ .+||+||+-. . +.+|+.=|..+|||.|.++.
T Consensus 64 ~v~GTPaDCV~la-------l~~~---l~~--~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 64 VIDGTPADCVHLG-------YRVI---LEE--KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp ETTCCHHHHHHHH-------HHTT---TTT--CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ecCCChHHHHhhh-------hhhh---cCC--CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 0112333332221 1122 222 4799999932 2 25566778889999999973
No 62
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=88.99 E-value=3.1 Score=37.68 Aligned_cols=112 Identities=10% Similarity=0.006 Sum_probs=66.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCCC----
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLP---- 85 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---- 85 (478)
||||+.-=-|. |.--+.+|++.|++.| +|+++.+...+.-+-. ++.....+++..++.+.+
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~-------------siTl~~pl~~~~~~~~~~~~~~ 65 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGH-------------AITIAHPVRAYPHPSPLHAPHF 65 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCS-------------SCCCSSCBEEEECCCCTTSCCC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcc-------------cccCCCCeEEEEeccCcCCCCC
Confidence 57766542222 3344778999999888 8999999887666541 123333677777654211
Q ss_pred CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcC----------C---chhhHHHHHHcCCccEEEec
Q 011724 86 LNFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDT----------F---FVWSSMIAKKYNLVNISFWT 151 (478)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~----------~---~~~~~~~A~~lgiP~v~~~~ 151 (478)
....-......-....+ . +. .+||+||+-. . +.++..-|..+|||.|.++.
T Consensus 66 ~~~~v~GTPaDCV~lal-------~-----l~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 66 PAYRVRGTPADCVALGL-------H-----LF---GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp CEEEEESCHHHHHHHHH-------H-----HS---CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred ceEEEcCcHHHHHHHHH-------c-----CC---CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 01111233333333221 1 22 5799999742 1 24556667889999999974
No 63
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=88.42 E-value=4 Score=35.63 Aligned_cols=97 Identities=12% Similarity=0.128 Sum_probs=64.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCch------hhhhhhhcCCCCCcchhccccCCCCCeEEEEcCC
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSI------HHQITKAQSNGDEDDIFAGARKAGLDIRYATVSD 82 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 82 (478)
+-.|++++..+.|-..-.+++|.+.+.+|++|.|+..-.. ...++ .. ++.++....
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~---~L---------------~v~~~~~g~ 89 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLE---PH---------------GVEFQVMAT 89 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHG---GG---------------TCEEEECCT
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHH---hC---------------CcEEEEccc
Confidence 3578999999999999999999999999999999965443 12233 22 477777765
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCc
Q 011724 83 GLPLNFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFF 132 (478)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~ 132 (478)
++.. ....... -.......+....+.+.+ .++|+||.|.+.
T Consensus 90 gf~~---~~~~~~~----~~~~a~~~l~~a~~~l~~--~~yDlvILDEi~ 130 (196)
T 1g5t_A 90 GFTW---ETQNREA----DTAACMAVWQHGKRMLAD--PLLDMVVLDELT 130 (196)
T ss_dssp TCCC---CGGGHHH----HHHHHHHHHHHHHHHTTC--TTCSEEEEETHH
T ss_pred cccc---CCCCcHH----HHHHHHHHHHHHHHHHhc--CCCCEEEEeCCC
Confidence 5432 1111111 112234455556566654 679999999864
No 64
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=88.31 E-value=1.9 Score=43.50 Aligned_cols=107 Identities=15% Similarity=0.161 Sum_probs=69.3
Q ss_pred eEE-eeccChH---hhhhccCcceeee---ccCch-hhHHHHhcCc-----ceeccCc--ccchhHHHHHhhcccCHHHH
Q 011724 347 GLI-VPWCSQI---DVISHSAIGGFLT---HCGWN-SIQESIWCSV-----PLLCFPL--LTDQFTNRKLVKSSITKEEV 411 (478)
Q Consensus 347 v~v-~~~ipq~---~vL~~~~v~~~It---HGG~~-s~~Eal~~Gv-----P~l~~P~--~~DQ~~na~rv~~~~t~~~l 411 (478)
+.+ .+++++. +++..+++ ||. .=|+| ++.||++||+ |+|+--. ..++..+| .+....+.+++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l~~g-~lv~p~d~~~l 409 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSA-LIVNPYDRDEV 409 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCTTS-EEECTTCHHHH
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHhCCe-EEECCCCHHHH
Confidence 553 4888865 46778888 664 34664 8899999997 6766543 23444322 22335578999
Q ss_pred HHHHHHHhCCCChHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 011724 412 SEKINRLMSGKSSDELRKNIKEVRKKLENALSADGSSQKNFNQFINDVQFL 462 (478)
Q Consensus 412 ~~~v~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~i~~~~~~ 462 (478)
+++|.++|+.+ ..+-+++.++..+..++ .+...-++++++.+...
T Consensus 410 A~ai~~lL~~~-~~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 410 AAALDRALTMS-LAERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp HHHHHHHHTCC-HHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHcCC-HHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 99999999721 12233444444444433 46778888999988875
No 65
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=88.28 E-value=2.9 Score=38.76 Aligned_cols=113 Identities=10% Similarity=-0.085 Sum_probs=64.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCCCCCCC
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLPLNFD 89 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 89 (478)
||||+.-=-|. +.--+.+|++.|++.| +|+++.+...+.-+..+ +.....+++..++.+-.....
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~s-------------iTl~~pl~~~~~~~~~~~~~~ 65 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLG-------------ITLHKPLRMYEVDLCGFRAIA 65 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSS-------------CCCSSCBCEEEEECSSSEEEE
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCccc-------------ccCCCCeEEEEeccCCCceEE
Confidence 57766542222 3344778999999988 99999998877666421 122235565555321000011
Q ss_pred CCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcC--------------CchhhHHHHHHcCCccEEEec
Q 011724 90 RSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDT--------------FFVWSSMIAKKYNLVNISFWT 151 (478)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~--------------~~~~~~~~A~~lgiP~v~~~~ 151 (478)
-.+....-....+ ..+ . .+||+||+.. .+.++..=|..+|||.|.++.
T Consensus 66 v~GTPaDCV~lal-------~~l-----~--~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (280)
T 1l5x_A 66 TSGTPSDTVYLAT-------FGL-----G--RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSA 127 (280)
T ss_dssp ESSCHHHHHHHHH-------HHH-----T--SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ECCcHHHHHHHHH-------hcC-----C--CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEc
Confidence 1233333333321 122 1 4799999732 124455667789999999975
No 66
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=87.32 E-value=3.1 Score=37.77 Aligned_cols=114 Identities=9% Similarity=0.016 Sum_probs=65.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCCC-CCC
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLP-LNF 88 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~ 88 (478)
||||+.-=-|. |.--+.+|++.|++.| +|+++.+...+.-+-.+ +.....+++..++.+.. ...
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~s-------------iTl~~pl~~~~~~~~~~~~~~ 65 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHS-------------ITIHVPLWMKKVFISERVVAY 65 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTC-------------CCCSSCCCEEECCCSSSEEEE
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCccc-------------ccCCCCeEEEEeccCCCCceE
Confidence 56666542222 3344778999999888 89999998877666421 12223566666543200 001
Q ss_pred CCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCC-------------chhhHHHHHHcCCccEEEec
Q 011724 89 DRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTF-------------FVWSSMIAKKYNLVNISFWT 151 (478)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~-------------~~~~~~~A~~lgiP~v~~~~ 151 (478)
.-......-....+ ..++ . .+||+||+-.. +.++..=|..+|||.|.++.
T Consensus 66 ~v~GTPaDCV~lal-------~~l~---~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 66 STTGTPADCVKLAY-------NVVM---D---KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp EESSCHHHHHHHHH-------HTTS---T---TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred EECCcHHHHHHHHH-------Hhhc---c---CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 11233333333221 1222 1 46999997421 24456667889999999974
No 67
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=86.01 E-value=0.34 Score=48.07 Aligned_cols=41 Identities=10% Similarity=0.039 Sum_probs=31.9
Q ss_pred CCCCEEEEEcCC---C--ccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 7 KPKPHAIAICYP---L--QGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 7 ~~~~~il~~~~~---~--~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
.++|||++++.. + .|=......||++|+++||+|++++...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 466999988833 2 1333568899999999999999999864
No 68
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=84.07 E-value=1.2 Score=39.54 Aligned_cols=51 Identities=24% Similarity=0.204 Sum_probs=38.2
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhh
Q 011724 1 MENNHKKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQIT 53 (478)
Q Consensus 1 ~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 53 (478)
|++....+.+||++...++.+-+. ...|.+.|+++| +|.++.++....++.
T Consensus 11 ~~~~~~l~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~ 61 (209)
T 1mvl_A 11 MEVNTTPRKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLD 61 (209)
T ss_dssp --------CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCC
T ss_pred cccccccCCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcC
Confidence 344434456899999989988766 899999999999 999999999887775
No 69
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=84.02 E-value=2.9 Score=42.21 Aligned_cols=110 Identities=8% Similarity=-0.032 Sum_probs=72.4
Q ss_pred CeEEeeccCh---HhhhhccCcceeee---ccCchh-hHHHHhcC---cceeccCccc--chhHHHHHhhcccCHHHHHH
Q 011724 346 RGLIVPWCSQ---IDVISHSAIGGFLT---HCGWNS-IQESIWCS---VPLLCFPLLT--DQFTNRKLVKSSITKEEVSE 413 (478)
Q Consensus 346 nv~v~~~ipq---~~vL~~~~v~~~It---HGG~~s-~~Eal~~G---vP~l~~P~~~--DQ~~na~rv~~~~t~~~l~~ 413 (478)
.|.+.+.+|+ ..++..+++ |+. .=|+|. ..||++|| .|+|+--+.+ ++....+.++...+.+++++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l~~~allVnP~D~~~lA~ 430 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCGAAEVLGEYCRSVNPFDLVEQAE 430 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHHGGGSEEECTTBHHHHHH
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCCCHHHhCCCEEEECCCCHHHHHH
Confidence 5777788886 456667888 553 458875 58999996 6666555432 44322233333668899999
Q ss_pred HHHHHhCCCChHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcC
Q 011724 414 KINRLMSGKSSDELRKNIKEVRKKLENALSADGSSQKNFNQFINDVQFLT 463 (478)
Q Consensus 414 ~v~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~i~~~~~~~ 463 (478)
+|.++|+.. ..+-+++.+++.+..++ .+...-+++|++.+....
T Consensus 431 AI~~aL~m~-~~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~~~ 474 (496)
T 3t5t_A 431 AISAALAAG-PRQRAEAAARRRDAARP-----WTLEAWVQAQLDGLAADH 474 (496)
T ss_dssp HHHHHHHCC-HHHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCC-HHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhhcc
Confidence 999999722 23345555555555543 667778889998887643
No 70
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=82.40 E-value=1.7 Score=38.41 Aligned_cols=45 Identities=9% Similarity=-0.012 Sum_probs=39.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhh
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQIT 53 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 53 (478)
+++||++...|+.|-+. ...|.+.|++.|++|.++.++.....+.
T Consensus 3 ~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~ 47 (209)
T 3zqu_A 3 GPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMA 47 (209)
T ss_dssp SCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHH
Confidence 34899999888888777 8899999999999999999999988886
No 71
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=79.16 E-value=19 Score=32.12 Aligned_cols=108 Identities=5% Similarity=0.008 Sum_probs=58.7
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCch-hhhhhhhcCCCCCcchhccccCCCCCeEEEEcC
Q 011724 5 HKKPKPHAIAICYPLQGHVIPFVNLALKLASS--GFTITFVNTHSI-HHQITKAQSNGDEDDIFAGARKAGLDIRYATVS 81 (478)
Q Consensus 5 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 81 (478)
.+.+||||+|+..++.+ -+.++.+.|.+. +++|..+.+... ....+.+.+. +|.+..++
T Consensus 18 ~~~~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~---------------gIp~~~~~ 79 (229)
T 3auf_A 18 FQGHMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRA---------------GVDALHMD 79 (229)
T ss_dssp CBTTCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHT---------------TCEEEECC
T ss_pred ccCCCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHc---------------CCCEEEEC
Confidence 34567899999876642 367778888776 688877665532 2212211144 77777554
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCc-hhhHHHHHHcCCccEEE
Q 011724 82 DGLPLNFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFF-VWSSMIAKKYNLVNISF 149 (478)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~-~~~~~~A~~lgiP~v~~ 149 (478)
... . .+- ......+.+.++. .+||+||+=.+. .-...+-......++-+
T Consensus 80 ~~~---~---~~r--------~~~~~~~~~~l~~-----~~~Dliv~agy~~IL~~~~l~~~~~~~iNi 129 (229)
T 3auf_A 80 PAA---Y---PSR--------TAFDAALAERLQA-----YGVDLVCLAGYMRLVRGPMLTAFPNRILNI 129 (229)
T ss_dssp GGG---S---SSH--------HHHHHHHHHHHHH-----TTCSEEEESSCCSCCCHHHHHHSTTCEEEE
T ss_pred ccc---c---cch--------hhccHHHHHHHHh-----cCCCEEEEcChhHhCCHHHHhhccCCEEEE
Confidence 210 0 010 0111122234444 469999998765 33444445555555555
No 72
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=78.71 E-value=8 Score=35.19 Aligned_cols=111 Identities=12% Similarity=0.083 Sum_probs=63.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCCCCCCC
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLPLNFD 89 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 89 (478)
||||+.-=-+. |.--+.+|++.|++.| +|+++.+...+.-+-.+ +.....+++..+... ...
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g~a-------------iTl~~Pl~~~~~~~~---~~~ 63 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGASNS-------------LTLESSLRTFTFDNG---DIA 63 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTC-------------CCCSSCCEEEECTTS---CEE
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCccCC-------------cCCCCCeEEEEeCCC---CeE
Confidence 68777653333 4445777999998876 99999998877666421 122335666655211 111
Q ss_pred CC-CCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCC----------c---hhhHHHHHHcCCccEEEec
Q 011724 90 RS-LNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTF----------F---VWSSMIAKKYNLVNISFWT 151 (478)
Q Consensus 90 ~~-~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~----------~---~~~~~~A~~lgiP~v~~~~ 151 (478)
-. .....-....+ ..++ . .+||+||+-.. + .++..-|..+|||.|.++.
T Consensus 64 v~~GTPaDCV~lal-------~~ll---~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 126 (254)
T 2v4n_A 64 VQMGTPTDCVYLGV-------NALM---R---PRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSL 126 (254)
T ss_dssp EETCCHHHHHHHHH-------HTTS---S---SCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEE
T ss_pred ECCCCHHHHHHHHH-------hhcc---C---CCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 12 33333333321 1222 2 47999998431 1 2344445667999999974
No 73
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=78.70 E-value=3.1 Score=36.12 Aligned_cols=44 Identities=11% Similarity=0.085 Sum_probs=38.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhh
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQIT 53 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 53 (478)
|+||++...++.|-+ =...|.+.|+++|++|.++.++.....+.
T Consensus 1 mk~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~ 44 (189)
T 2ejb_A 1 MQKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLK 44 (189)
T ss_dssp CCEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CCEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhh
Confidence 468999998988854 57889999999999999999999998887
No 74
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=77.52 E-value=11 Score=32.39 Aligned_cols=39 Identities=26% Similarity=0.372 Sum_probs=30.8
Q ss_pred CEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCch
Q 011724 10 PHAIAIC--YPLQGHVIPFVNLALKLASSGFTITFVNTHSI 48 (478)
Q Consensus 10 ~~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 48 (478)
||++.+. -+|-|-..-...||..|+++|++|.++-.+..
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~ 41 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQ 41 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 3444443 56779999999999999999999999987643
No 75
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=76.81 E-value=9 Score=36.47 Aligned_cols=43 Identities=19% Similarity=0.172 Sum_probs=35.3
Q ss_pred CCCCEEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCchh
Q 011724 7 KPKPHAIAIC-YPLQGHVIPFVNLALKLASSGFTITFVNTHSIH 49 (478)
Q Consensus 7 ~~~~~il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 49 (478)
+++++|+|++ -+|-|-..-..+||..|+++|++|.++..+...
T Consensus 13 ~~~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~ 56 (334)
T 3iqw_A 13 QRSLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAH 56 (334)
T ss_dssp CTTCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSC
T ss_pred CCCeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCC
Confidence 3456776666 567799999999999999999999999988543
No 76
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=75.90 E-value=18 Score=31.89 Aligned_cols=35 Identities=9% Similarity=-0.003 Sum_probs=25.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCC--eEEEEeCC
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGF--TITFVNTH 46 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh--~Vt~~~~~ 46 (478)
||||+|+..+..+ -+.++.++|.+.+| +|..+.+.
T Consensus 1 m~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~ 37 (216)
T 2ywr_A 1 MLKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISD 37 (216)
T ss_dssp CEEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEES
T ss_pred CCEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeC
Confidence 5799998766543 46778888888888 77666654
No 77
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=75.88 E-value=13 Score=33.75 Aligned_cols=38 Identities=11% Similarity=0.158 Sum_probs=30.0
Q ss_pred CCCCEEEEEcCC--CccCHHHHHHHHHHHHhCCCeEEEEe
Q 011724 7 KPKPHAIAICYP--LQGHVIPFVNLALKLASSGFTITFVN 44 (478)
Q Consensus 7 ~~~~~il~~~~~--~~GH~~p~l~La~~L~~rGh~Vt~~~ 44 (478)
.++|+.+|++.. +-|-..-.+.|++.|+++|++|.++=
T Consensus 23 ~~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fK 62 (251)
T 3fgn_A 23 QSHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCK 62 (251)
T ss_dssp CSSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Confidence 344666666633 45899999999999999999999984
No 78
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=75.29 E-value=3.5 Score=35.31 Aligned_cols=43 Identities=7% Similarity=0.023 Sum_probs=36.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhh
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQIT 53 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 53 (478)
+||++...++.|=+. ...|.+.|+++|++|.++.++.....+.
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi~ 48 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFIN 48 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGSC
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHhh
Confidence 689888888876654 8899999999999999999999887765
No 79
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=74.12 E-value=3.5 Score=36.02 Aligned_cols=43 Identities=16% Similarity=0.030 Sum_probs=37.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCchhhhhh
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASS-GFTITFVNTHSIHHQIT 53 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~~~ 53 (478)
|||++...++.|-+. ...|.+.|+++ |++|.++.++.....+.
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~ 44 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIE 44 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhH
Confidence 588888888877655 89999999999 99999999999988886
No 80
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=73.05 E-value=5.1 Score=32.66 Aligned_cols=44 Identities=14% Similarity=0.121 Sum_probs=37.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhh
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQI 52 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 52 (478)
+.||++.+.++-+|-....-++..|..+|++|...+.....+.+
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~ 46 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELF 46 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHH
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 36899999999999999999999999999999988765544433
No 81
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=73.01 E-value=7.9 Score=37.51 Aligned_cols=37 Identities=14% Similarity=-0.012 Sum_probs=31.6
Q ss_pred CCEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011724 9 KPHAIAICY-PLQGHVIPFVNLALKLASSGFTITFVNT 45 (478)
Q Consensus 9 ~~~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 45 (478)
||+|+++.. ++.|-..-..+||..|+++|++|.++..
T Consensus 1 M~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 1 MALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp -CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 578887774 5669999999999999999999999998
No 82
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=71.80 E-value=35 Score=29.92 Aligned_cols=35 Identities=3% Similarity=-0.064 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCC
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASS--GFTITFVNTH 46 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~ 46 (478)
|+||+++..++.+ -+.++.++|.+. +|+|..+.+.
T Consensus 3 m~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~ 39 (212)
T 3av3_A 3 MKRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCD 39 (212)
T ss_dssp CEEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEES
T ss_pred CcEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeC
Confidence 5799888877644 366677888776 7899877765
No 83
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=70.37 E-value=4.5 Score=35.46 Aligned_cols=45 Identities=16% Similarity=0.002 Sum_probs=37.2
Q ss_pred CCCEEEEEcCCCccCHH-HHHHHHHHHHhCCCeEEEEeCCchhhhhh
Q 011724 8 PKPHAIAICYPLQGHVI-PFVNLALKLASSGFTITFVNTHSIHHQIT 53 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~-p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 53 (478)
+++||++...|+ +..+ -.+.|.+.|+++|++|.++.++.....+.
T Consensus 6 ~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i~ 51 (201)
T 3lqk_A 6 AGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTTDT 51 (201)
T ss_dssp TTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTTC
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHHH
Confidence 457999888887 4555 78999999999999999999998766664
No 84
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=68.67 E-value=22 Score=30.20 Aligned_cols=38 Identities=13% Similarity=-0.028 Sum_probs=27.2
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEECCC
Q 011724 284 GSVLYVSFGSYAHASKNDIVEIALGLLLSEVSFVWVLRPD 323 (478)
Q Consensus 284 ~~~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 323 (478)
+|+|-|-+||.. +....++....|++++..+-..+.+-
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SA 59 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA 59 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcc
Confidence 456888888876 45567888888888888766655433
No 85
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=68.33 E-value=7.9 Score=33.99 Aligned_cols=45 Identities=18% Similarity=0.045 Sum_probs=39.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhh
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQI 52 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 52 (478)
+..+|++.+.++..|-....-++..|..+|++|.+.+.....+.+
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l 131 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKF 131 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 356999999999999999999999999999999999886655544
No 86
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=68.25 E-value=6.8 Score=32.17 Aligned_cols=44 Identities=16% Similarity=0.219 Sum_probs=35.9
Q ss_pred CEEEEEc-CCCc-cCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhh
Q 011724 10 PHAIAIC-YPLQ-GHVIPFVNLALKLASSGFTITFVNTHSIHHQIT 53 (478)
Q Consensus 10 ~~il~~~-~~~~-GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 53 (478)
||++++- .|.. -.+--.+-++..|+++||+|++.+++.....++
T Consensus 7 m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLle 52 (157)
T 1kjn_A 7 GKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQ 52 (157)
T ss_dssp CEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred eeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhhee
Confidence 6776554 5544 666668889999999999999999999998887
No 87
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=67.22 E-value=6 Score=33.26 Aligned_cols=43 Identities=16% Similarity=0.220 Sum_probs=37.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhh
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHH 50 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 50 (478)
++.||++.+.++.+|-....-++..|...|++|++.......+
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e 59 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPE 59 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHH
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHH
Confidence 4689999999999999999999999999999999987654433
No 88
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=66.50 E-value=5.9 Score=37.52 Aligned_cols=36 Identities=17% Similarity=0.087 Sum_probs=30.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
+.|+||.|+-.++.| +-++|+.|+++||+|+..=..
T Consensus 2 ~~~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 2 NAMKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp -CCCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcCC
Confidence 567899999999888 567999999999999987553
No 89
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=66.48 E-value=35 Score=30.21 Aligned_cols=137 Identities=12% Similarity=0.086 Sum_probs=75.1
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChHhhhhcc
Q 011724 283 RGSVLYVSFGSYAHASKNDIVEIALGLLLSEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQIDVISHS 362 (478)
Q Consensus 283 ~~~~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~~vL~~~ 362 (478)
.++++.|..|.++ ...+..|.+.|..+.++.... .+.+..-. ..+.+.+....-+...|..+
T Consensus 31 gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~~----------~~~l~~l~-~~~~i~~i~~~~~~~dL~~a 92 (223)
T 3dfz_A 31 GRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPTV----------SAEINEWE-AKGQLRVKRKKVGEEDLLNV 92 (223)
T ss_dssp TCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSSC----------CHHHHHHH-HTTSCEEECSCCCGGGSSSC
T ss_pred CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCCC----------CHHHHHHH-HcCCcEEEECCCCHhHhCCC
Confidence 4568888877665 455677777888877664321 12222210 12345444222234456777
Q ss_pred CcceeeeccCchhhHHHHhcCcceeccCc-ccchhHHHHHh-----hc-------------ccCHHHHHHHHHHHhCCCC
Q 011724 363 AIGGFLTHCGWNSIQESIWCSVPLLCFPL-LTDQFTNRKLV-----KS-------------SITKEEVSEKINRLMSGKS 423 (478)
Q Consensus 363 ~v~~~ItHGG~~s~~Eal~~GvP~l~~P~-~~DQ~~na~rv-----~~-------------~~t~~~l~~~v~~ll~~~~ 423 (478)
++ +|.--|.-.+.+.++.-.- ..+|. ..|.|..+.-+ .+ -.-+..|++.|.+++- +.
T Consensus 93 dL--VIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~G~sP~la~~iR~~ie~~lp-~~ 168 (223)
T 3dfz_A 93 FF--IVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQFSRGRLSLAISTDGASPLLTKRIKEDLSSNYD-ES 168 (223)
T ss_dssp SE--EEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHHHSC-TH
T ss_pred CE--EEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEEEeCCEEEEEECCCCCcHHHHHHHHHHHHHcc-HH
Confidence 77 9988888777777665443 44444 35666555322 11 2224667777777774 22
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 011724 424 SDELRKNIKEVRKKLENA 441 (478)
Q Consensus 424 ~~~~r~~a~~l~~~~~~a 441 (478)
...+-+.+.++++++++.
T Consensus 169 ~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 169 YTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 355667777777777653
No 90
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=66.48 E-value=19 Score=32.62 Aligned_cols=34 Identities=12% Similarity=0.008 Sum_probs=25.1
Q ss_pred CCccEEEE-cCCc-hhhHHHHHHcCCccEEEecchh
Q 011724 121 PEMNCLVT-DTFF-VWSSMIAKKYNLVNISFWTEPA 154 (478)
Q Consensus 121 ~~pD~vi~-D~~~-~~~~~~A~~lgiP~v~~~~~~~ 154 (478)
..||+||+ |... .-+..=|.++|||+|.++.+.+
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn~ 192 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDS 192 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTTS
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCC
Confidence 46888875 5433 5567779999999999976543
No 91
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=66.09 E-value=3.6 Score=38.55 Aligned_cols=46 Identities=13% Similarity=0.121 Sum_probs=30.2
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhC-----C-CeEEEEeCCchhhhhh
Q 011724 3 NNHKKPKPHAIAICYPLQGHVIPFVNLALKLASS-----G-FTITFVNTHSIHHQIT 53 (478)
Q Consensus 3 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~r-----G-h~Vt~~~~~~~~~~~~ 53 (478)
|.+++++|||+|+-.+..|. .+|..|++. | |+|+++......+.+.
T Consensus 2 ~~m~~~~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r~~~~~~l~ 53 (317)
T 2qyt_A 2 NAMNQQPIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIARGAHLEAIR 53 (317)
T ss_dssp -----CCEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECCHHHHHHHH
T ss_pred CCCCCCCCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEcHHHHHHHH
Confidence 44566678999997776663 568888888 9 9999997633334444
No 92
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=65.86 E-value=15 Score=38.46 Aligned_cols=46 Identities=11% Similarity=0.124 Sum_probs=33.5
Q ss_pred CCeEEe---eccCh---------HhhhhccCcceeee---ccCc-hhhHHHHhcCcceeccCcc
Q 011724 345 GRGLIV---PWCSQ---------IDVISHSAIGGFLT---HCGW-NSIQESIWCSVPLLCFPLL 392 (478)
Q Consensus 345 ~nv~v~---~~ipq---------~~vL~~~~v~~~It---HGG~-~s~~Eal~~GvP~l~~P~~ 392 (478)
++|.++ .|++. .++++.+++ ||. +=|+ .+.+||+++|+|+|+.-..
T Consensus 490 drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 490 DRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp CSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred CceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 445443 88865 457899999 664 3344 5899999999999987664
No 93
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=65.49 E-value=3.7 Score=38.55 Aligned_cols=41 Identities=17% Similarity=0.101 Sum_probs=31.2
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 1 MENNHKKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 1 ~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
|.++...++|||.|+-.+..| ..+|+.|++.||+|+++...
T Consensus 1 m~m~~~~~~~~IgiIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 41 (306)
T 3l6d_A 1 MSLSDESFEFDVSVIGLGAMG-----TIMAQVLLKQGKRVAIWNRS 41 (306)
T ss_dssp -CCCCCCCSCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCCCcccCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 677766677999999766555 36899999999999987543
No 94
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=65.38 E-value=18 Score=30.52 Aligned_cols=38 Identities=13% Similarity=0.003 Sum_probs=26.7
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEECCC
Q 011724 284 GSVLYVSFGSYAHASKNDIVEIALGLLLSEVSFVWVLRPD 323 (478)
Q Consensus 284 ~~~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 323 (478)
.|.|-|-+||.. +....++....|++++..+-+.+.+-
T Consensus 12 ~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa 49 (173)
T 4grd_A 12 APLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA 49 (173)
T ss_dssp SCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc
Confidence 456878888876 45567778888888888765555433
No 95
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=65.30 E-value=5.6 Score=34.22 Aligned_cols=44 Identities=7% Similarity=-0.028 Sum_probs=37.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhh
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQIT 53 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 53 (478)
++||++...++.|=+ -...|.+.|+++|++|.++.++.....+.
T Consensus 2 ~k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~ 45 (181)
T 1g63_A 2 YGKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFIN 45 (181)
T ss_dssp CCCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSC
T ss_pred CCEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHH
Confidence 368888887877666 67899999999999999999999887775
No 96
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=63.29 E-value=4.6 Score=35.20 Aligned_cols=44 Identities=16% Similarity=-0.036 Sum_probs=37.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhh
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQIT 53 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 53 (478)
.+||++...++.|=+. ...|.+.|.++|++|.++.++.....+.
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi~ 51 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLIP 51 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHSC
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHHH
Confidence 4689888888877665 7889999999999999999998887764
No 97
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=62.74 E-value=9 Score=35.90 Aligned_cols=48 Identities=8% Similarity=-0.063 Sum_probs=32.5
Q ss_pred CCCCCCCCCCEEEEEcCCCcc-C---HHHHHHHHHHHHhCCCeEEEEeCCch
Q 011724 1 MENNHKKPKPHAIAICYPLQG-H---VIPFVNLALKLASSGFTITFVNTHSI 48 (478)
Q Consensus 1 ~~~~~~~~~~~il~~~~~~~G-H---~~p~l~La~~L~~rGh~Vt~~~~~~~ 48 (478)
|++....+++||+++..+-.+ | +.....++++|.+.||+|..+.+...
T Consensus 5 ~~~~~~~~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~~ 56 (317)
T 4eg0_A 5 MSGIDPKRFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAER 56 (317)
T ss_dssp ---CCGGGGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTS
T ss_pred cCccchhhcceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 444444456899988854332 3 34677899999999999999986543
No 98
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=62.71 E-value=14 Score=29.85 Aligned_cols=45 Identities=7% Similarity=-0.093 Sum_probs=33.9
Q ss_pred CCEEEEEcCCC---ccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhh
Q 011724 9 KPHAIAICYPL---QGHVIPFVNLALKLASSGFTITFVNTHSIHHQIT 53 (478)
Q Consensus 9 ~~~il~~~~~~---~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 53 (478)
++|++|+..-+ .......+.+|...++.||+|+++........+.
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~~l~ 62 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPXLLD 62 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGGGGB
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHHHHh
Confidence 46776655433 4677788889999999999999998887666554
No 99
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=62.64 E-value=7.5 Score=34.18 Aligned_cols=44 Identities=9% Similarity=-0.110 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEeCCchhhhh
Q 011724 8 PKPHAIAICYPLQGHVIP-FVNLALKLASSGFTITFVNTHSIHHQI 52 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~~~~~~~~~ 52 (478)
+.+||++...|+ +..+- ...|.+.|+++|++|.++.++.....+
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~~vl 48 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQSTN 48 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC------
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHHHHH
Confidence 347898888776 45665 889999999999999999999876444
No 100
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=61.98 E-value=17 Score=34.81 Aligned_cols=40 Identities=15% Similarity=0.095 Sum_probs=33.8
Q ss_pred CCCEEEEEc-CCCccCHHHHHHHHHHHH--hCCCeEEEEeCCc
Q 011724 8 PKPHAIAIC-YPLQGHVIPFVNLALKLA--SSGFTITFVNTHS 47 (478)
Q Consensus 8 ~~~~il~~~-~~~~GH~~p~l~La~~L~--~rGh~Vt~~~~~~ 47 (478)
+.++|++++ -+|-|-..-..+||..|+ ++|++|.++..+.
T Consensus 16 ~~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~ 58 (348)
T 3io3_A 16 DSLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDP 58 (348)
T ss_dssp TTCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCS
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 346776666 567799999999999999 8999999999974
No 101
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=61.09 E-value=38 Score=32.62 Aligned_cols=36 Identities=6% Similarity=-0.106 Sum_probs=27.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
++++||+++..+.. .+.+++.+++.|+++.++..+.
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~~ 40 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMPN 40 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECSS
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCCC
Confidence 45689999876654 3669999999999999997643
No 102
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=59.39 E-value=42 Score=28.17 Aligned_cols=36 Identities=14% Similarity=-0.031 Sum_probs=24.4
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEC
Q 011724 284 GSVLYVSFGSYAHASKNDIVEIALGLLLSEVSFVWVLR 321 (478)
Q Consensus 284 ~~~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~ 321 (478)
+|.|-|-+||.. +.+..++....|++.+.++=+.+.
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~ 46 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVV 46 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEE
Confidence 355777777765 455667777888888877655554
No 103
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=59.39 E-value=13 Score=32.76 Aligned_cols=46 Identities=17% Similarity=0.173 Sum_probs=38.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhh
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQI 52 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 52 (478)
.+..||++.+.++..|-....-++..|..+|++|+..+.....+.+
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~i 135 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENV 135 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHH
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHH
Confidence 4458999999999999999999999999999999999876555444
No 104
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=59.31 E-value=66 Score=31.23 Aligned_cols=38 Identities=16% Similarity=0.169 Sum_probs=26.0
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 5 HKKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 5 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|+++.+||+++...- .+ ..+.++.++.|++|+++.+..
T Consensus 1 M~~~~k~l~Il~~~~-~~----~~i~~aa~~lG~~vv~v~~~~ 38 (425)
T 3vot_A 1 MTKRNKNLAIICQNK-HL----PFIFEEAERLGLKVTFFYNSA 38 (425)
T ss_dssp -CCCCCEEEEECCCT-TC----CHHHHHHHHTTCEEEEEEETT
T ss_pred CCCCCcEEEEECCCh-hH----HHHHHHHHHCCCEEEEEECCC
Confidence 346678999987443 22 235677888899999987644
No 105
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=59.24 E-value=80 Score=26.60 Aligned_cols=36 Identities=14% Similarity=0.009 Sum_probs=23.7
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEECC
Q 011724 285 SVLYVSFGSYAHASKNDIVEIALGLLLSEVSFVWVLRP 322 (478)
Q Consensus 285 ~~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 322 (478)
|.|-|-+||.. +....++....|+..+.++=+.+.+
T Consensus 8 ~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~S 43 (174)
T 3lp6_A 8 PRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVS 43 (174)
T ss_dssp CSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEC
Confidence 34666677665 4556677788888888776555543
No 106
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=59.17 E-value=12 Score=35.00 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=30.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhh
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQIT 53 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 53 (478)
|||+++-.+..| ..+|..|++.||+|+++.... .+.+.
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~-~~~i~ 40 (312)
T 3hn2_A 3 LRIAIVGAGALG-----LYYGALLQRSGEDVHFLLRRD-YEAIA 40 (312)
T ss_dssp -CEEEECCSTTH-----HHHHHHHHHTSCCEEEECSTT-HHHHH
T ss_pred CEEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcCc-HHHHH
Confidence 799999888888 456889999999999999876 46665
No 107
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=58.94 E-value=13 Score=33.93 Aligned_cols=45 Identities=13% Similarity=0.070 Sum_probs=38.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhh
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQ 51 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~ 51 (478)
.+..+|++.+.++..|-....-++..|..+|++|.+.+.....+.
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~ 165 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEE 165 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHH
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 345799999999999999999999999999999998886544433
No 108
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=58.90 E-value=10 Score=35.79 Aligned_cols=37 Identities=16% Similarity=0.187 Sum_probs=28.1
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 6 KKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 6 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
+++||||+|+-.+..+ +...+.|.++||+|..+.+..
T Consensus 1 ~~~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 37 (317)
T 3rfo_A 1 SNAMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQP 37 (317)
T ss_dssp CCTTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCC
T ss_pred CCCceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCC
Confidence 4789999999877654 234567778899999888754
No 109
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=58.08 E-value=6 Score=37.63 Aligned_cols=42 Identities=10% Similarity=0.092 Sum_probs=30.6
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEeCCc
Q 011724 1 MENNHKKPKPHAIAICYPLQGHVIPFVNLALKLASSGF-TITFVNTHS 47 (478)
Q Consensus 1 ~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh-~Vt~~~~~~ 47 (478)
|++.+.+++|||.++-.+..|.. ||..|+..|| +|+++-...
T Consensus 1 ~~~~~~~~~~kI~VIGaG~vG~~-----lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 1 MAPALVQRRKKVAMIGSGMIGGT-----MGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp --CCCCSCCCEEEEECCSHHHHH-----HHHHHHHHTCCEEEEECSSS
T ss_pred CCcCcCCCCCEEEEECCCHHHHH-----HHHHHHhCCCCeEEEEECCh
Confidence 66677788899999875544433 8889999999 988887654
No 110
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=57.54 E-value=49 Score=27.77 Aligned_cols=35 Identities=11% Similarity=0.028 Sum_probs=21.6
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEC
Q 011724 285 SVLYVSFGSYAHASKNDIVEIALGLLLSEVSFVWVLR 321 (478)
Q Consensus 285 ~~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~ 321 (478)
|.|-|-+||.. +....++....|+..+.++-+.+.
T Consensus 7 ~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~ 41 (169)
T 3trh_A 7 IFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHIL 41 (169)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEE
Confidence 34556666654 455566777777777776655544
No 111
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=56.95 E-value=8.6 Score=33.80 Aligned_cols=46 Identities=20% Similarity=0.198 Sum_probs=36.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCchhhhhh
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLAS-SGFTITFVNTHSIHHQIT 53 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~~~~~ 53 (478)
.+++||++...++.+=+ -...|++.|++ .|++|.++.++....++.
T Consensus 17 l~~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A~~fi~ 63 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERAKHFYS 63 (206)
T ss_dssp CSSEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGGGGSSC
T ss_pred cCCCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhHHHHhC
Confidence 34478988888887744 45899999999 899999999999887775
No 112
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=56.88 E-value=29 Score=34.70 Aligned_cols=50 Identities=22% Similarity=0.243 Sum_probs=32.6
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCC
Q 011724 1 MENNHKKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSN 58 (478)
Q Consensus 1 ~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~ 58 (478)
|+..+.+++||-+|++. ++=.-++.+|+.|.+.|++|. ++..-...++ ..
T Consensus 1 ~~~~~~~~~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~---e~ 50 (523)
T 3zzm_A 1 MSTDDGRRPIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIA---DT 50 (523)
T ss_dssp ---CCCCCCCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHH---TT
T ss_pred CCcccccccccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHH---Hc
Confidence 55554445455444444 344558899999999999975 7777777777 66
No 113
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=56.83 E-value=13 Score=35.74 Aligned_cols=37 Identities=19% Similarity=0.247 Sum_probs=24.9
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEECCC
Q 011724 285 SVLYVSFGSYAHASKNDIVEIALGLLLSEVSFVWVLRPD 323 (478)
Q Consensus 285 ~~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 323 (478)
.+++.+-||..+..+. ..++++|++.|+.++|+....
T Consensus 4 ~i~i~~GGTgGHi~pa--lala~~L~~~g~~V~~vg~~~ 40 (365)
T 3s2u_A 4 NVLIMAGGTGGHVFPA--LACAREFQARGYAVHWLGTPR 40 (365)
T ss_dssp EEEEECCSSHHHHHHH--HHHHHHHHHTTCEEEEEECSS
T ss_pred cEEEEcCCCHHHHHHH--HHHHHHHHhCCCEEEEEECCc
Confidence 3666666676432222 458888999999999987543
No 114
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=56.55 E-value=24 Score=32.62 Aligned_cols=40 Identities=13% Similarity=0.223 Sum_probs=31.5
Q ss_pred CCEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCch
Q 011724 9 KPHAIAIC--YPLQGHVIPFVNLALKLASSGFTITFVNTHSI 48 (478)
Q Consensus 9 ~~~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 48 (478)
+.|+++++ -++-|-..-...||..|++.|.+|.++-.+.-
T Consensus 91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 91 QNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp TCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 34555554 45779999999999999999999999976553
No 115
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=55.79 E-value=35 Score=32.21 Aligned_cols=32 Identities=16% Similarity=0.020 Sum_probs=23.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNT 45 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 45 (478)
+|||+|+. --+-...+.++|.++||+|..+.+
T Consensus 22 ~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt 53 (329)
T 2bw0_A 22 SMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFT 53 (329)
T ss_dssp CCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEe
Confidence 38999992 223334567889899999987765
No 116
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=55.50 E-value=17 Score=32.40 Aligned_cols=41 Identities=10% Similarity=0.064 Sum_probs=36.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
+-+++|++...||.|-..-++.+|..|+++|++|.++..+.
T Consensus 4 ~g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 4 RGRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 34588999999999999999999999999999998887754
No 117
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=55.33 E-value=31 Score=30.35 Aligned_cols=49 Identities=6% Similarity=-0.054 Sum_probs=28.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCchhhhhhhhcCC
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLAS-SGFTITFVNTHSIHHQITKAQSN 58 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~~~~~~~~~~ 58 (478)
.+|+||+++..+..+- +.+|.+++.+ .+++|..+.+.......+.+.+.
T Consensus 10 ~~~~ri~vl~SG~gsn---l~all~~~~~~~~~eI~~Vis~~~a~~~~~A~~~ 59 (215)
T 3da8_A 10 SAPARLVVLASGTGSL---LRSLLDAAVGDYPARVVAVGVDRECRAAEIAAEA 59 (215)
T ss_dssp CSSEEEEEEESSCCHH---HHHHHHHSSTTCSEEEEEEEESSCCHHHHHHHHT
T ss_pred CCCcEEEEEEeCChHH---HHHHHHHHhccCCCeEEEEEeCCchHHHHHHHHc
Confidence 4568999988776443 3444555533 35688877765544333322255
No 118
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=55.06 E-value=86 Score=29.33 Aligned_cols=34 Identities=21% Similarity=0.039 Sum_probs=24.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
++|||+|+-.+..+ +...++|.++||+|..+.+.
T Consensus 6 ~~mrivf~Gt~~fa-----~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 6 QSLRIVFAGTPDFA-----ARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHTSSSEEEEEECC
T ss_pred cCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEcC
Confidence 46899998766433 34457777889999887774
No 119
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=54.36 E-value=83 Score=26.61 Aligned_cols=73 Identities=10% Similarity=0.044 Sum_probs=41.2
Q ss_pred eEEeeccCh-Hhhh-hccCcceeeeccCchhhHHH---HhcCcceeccCccc-chhHHHHHhhc----ccCHHHHHHHHH
Q 011724 347 GLIVPWCSQ-IDVI-SHSAIGGFLTHCGWNSIQES---IWCSVPLLCFPLLT-DQFTNRKLVKS----SITKEEVSEKIN 416 (478)
Q Consensus 347 v~v~~~ipq-~~vL-~~~~v~~~ItHGG~~s~~Ea---l~~GvP~l~~P~~~-DQ~~na~rv~~----~~t~~~l~~~v~ 416 (478)
..+++..++ ..++ ..++. .++-=||.||+-|+ +..++|++++|.+. ++-....+-.+ .-+++++.+.+.
T Consensus 91 ~i~~~~~~~Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~~~~gfi~~~~~~~i~~~~~~~e~~~~l~ 169 (176)
T 2iz6_A 91 PIVTGLGSARDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQPEAEKFFTSLDAGLVHVAADVAGAIAAVK 169 (176)
T ss_dssp EEECCCCSSSCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCCHHHHHHHHHHCTTTEEEESSHHHHHHHHH
T ss_pred eEEcCCHHHHHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCcccccccCChhhcCeEEEcCCHHHHHHHHH
Confidence 344566664 3333 34443 45556888886655 67999999999843 01100001001 556777777776
Q ss_pred HHhC
Q 011724 417 RLMS 420 (478)
Q Consensus 417 ~ll~ 420 (478)
+.+.
T Consensus 170 ~~~~ 173 (176)
T 2iz6_A 170 QLLA 173 (176)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6553
No 120
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=53.61 E-value=12 Score=34.35 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=24.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
|||++. |+.|-+- ..|+++|.++||+|+.++-.
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 787765 4455444 35789999999999998754
No 121
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=53.51 E-value=68 Score=26.82 Aligned_cols=131 Identities=12% Similarity=0.108 Sum_probs=69.5
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChHhhhhccCc
Q 011724 285 SVLYVSFGSYAHASKNDIVEIALGLLLSEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQIDVISHSAI 364 (478)
Q Consensus 285 ~~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~~vL~~~~v 364 (478)
|.|-|-+||.. +.+..++....|+..+..+-+.+.+-+ -.|+.+.+. +. -+....+
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~SaH-------Rtp~~l~~~------------~~---~~~~~g~ 61 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSAH-------RTPDKMFDY------------AE---TAKERGL 61 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTT-------TCHHHHHHH------------HH---HTTTTTC
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcCc-------CCHHHHHHH------------HH---HHHhCCC
Confidence 34666677765 456677888888888887666554331 233332221 00 0111123
Q ss_pred ceeeeccCch----hhHHHHhcCcceeccCcccchh-HHHHH--hhc----------ccC------HHHHHHHHHHHhCC
Q 011724 365 GGFLTHCGWN----SIQESIWCSVPLLCFPLLTDQF-TNRKL--VKS----------SIT------KEEVSEKINRLMSG 421 (478)
Q Consensus 365 ~~~ItHGG~~----s~~Eal~~GvP~l~~P~~~DQ~-~na~r--v~~----------~~t------~~~l~~~v~~ll~~ 421 (478)
++||.=.|.. ++.-+ ..-+|+|.+|...... ..... +.+ .+. +.-++..|..+ .
T Consensus 62 ~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I~~ag~~nAa~lAa~Il~~-~- 138 (166)
T 3oow_A 62 KVIIAGAGGAAHLPGMVAA-KTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGMAGAKNAALFAASILQH-T- 138 (166)
T ss_dssp CEEEEEECSSCCHHHHHHH-TCSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHGG-G-
T ss_pred cEEEEECCcchhhHHHHHh-ccCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHcC-C-
Confidence 3488777753 33322 3457888888743211 11111 122 122 22223333222 2
Q ss_pred CChHHHHHHHHHHHHHHHHHHhc
Q 011724 422 KSSDELRKNIKEVRKKLENALSA 444 (478)
Q Consensus 422 ~~~~~~r~~a~~l~~~~~~a~~~ 444 (478)
|++.+++.+..++++++.+.+
T Consensus 139 --d~~l~~kl~~~r~~~~~~v~~ 159 (166)
T 3oow_A 139 --DINIAKALAEFRAEQTRFVLE 159 (166)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHT
T ss_pred --CHHHHHHHHHHHHHHHHHHHh
Confidence 789999999999999876543
No 122
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=53.44 E-value=46 Score=28.08 Aligned_cols=36 Identities=17% Similarity=0.029 Sum_probs=23.7
Q ss_pred eEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEECCC
Q 011724 286 VLYVSFGSYAHASKNDIVEIALGLLLSEVSFVWVLRPD 323 (478)
Q Consensus 286 ~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 323 (478)
.|-|-+||.. +.+..++....|++.+.++-+.+.+-
T Consensus 14 ~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~Sa 49 (174)
T 3kuu_A 14 KIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVSA 49 (174)
T ss_dssp CEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred cEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc
Confidence 4666667665 45566777888888888766555433
No 123
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=53.27 E-value=11 Score=35.79 Aligned_cols=40 Identities=15% Similarity=0.119 Sum_probs=31.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhh
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQIT 53 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 53 (478)
+|||+++-.+..| ..+|..|++.||+|+++......+.+.
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~~~~~~~~ 42 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLALAGEAINVLARGATLQALQ 42 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCHHHHHHHH
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEChHHHHHHH
Confidence 4899999877776 457899999999999999754445554
No 124
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=53.23 E-value=15 Score=34.54 Aligned_cols=35 Identities=14% Similarity=0.202 Sum_probs=28.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
.++|||.|+-.+..| ..+|+.|++.||+|+++...
T Consensus 29 ~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 29 PYARKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CCCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred cCCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 456899999777767 66889999999999988654
No 125
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=52.77 E-value=13 Score=32.32 Aligned_cols=38 Identities=18% Similarity=0.177 Sum_probs=25.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHH-hCCCeEEEEeCCc
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLA-SSGFTITFVNTHS 47 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~-~rGh~Vt~~~~~~ 47 (478)
++|||.++++ ++.|-+- .++++.|+ ++||+|+.+.-..
T Consensus 2 ~~mmk~vlVt-Gasg~iG--~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 2 NAMYXYITIL-GAAGQIA--QXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp CCSCSEEEEE-STTSHHH--HHHHHHHHHHCCCEEEEEESSH
T ss_pred CceEEEEEEE-eCCcHHH--HHHHHHHHhcCCceEEEEecCc
Confidence 4567744444 3333332 57899999 8999999987653
No 126
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=52.64 E-value=14 Score=34.70 Aligned_cols=38 Identities=16% Similarity=0.183 Sum_probs=31.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhh
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQIT 53 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 53 (478)
|||+++-.+..| ..+|..|++.||+|+++.... .+.+.
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~-~~~i~ 40 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRSD-YETVK 40 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECSTT-HHHHH
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCCh-HHHHH
Confidence 899999888777 357889999999999999876 35565
No 127
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=52.43 E-value=9.5 Score=35.08 Aligned_cols=52 Identities=10% Similarity=0.125 Sum_probs=39.2
Q ss_pred cCcceeeeccCchhhHHHHhc------CcceeccCcccchhHHHHHhhcccCHHHHHHHHHHHhCC
Q 011724 362 SAIGGFLTHCGWNSIQESIWC------SVPLLCFPLLTDQFTNRKLVKSSITKEEVSEKINRLMSG 421 (478)
Q Consensus 362 ~~v~~~ItHGG~~s~~Eal~~------GvP~l~~P~~~DQ~~na~rv~~~~t~~~l~~~v~~ll~~ 421 (478)
+++ +|+=||-||+.+++.. ++|++.+|... .+ -+. .+.++++.+++++++.+
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G~---lg--fl~-~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHTGH---LG--FYA-DWRPAEADKLVKLLAKG 93 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEESSS---CC--SSC-CBCGGGHHHHHHHHHTT
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCCC---CC--cCC-cCCHHHHHHHHHHHHcC
Confidence 456 9999999999999765 89999998631 11 111 35688899999999874
No 128
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=52.41 E-value=74 Score=29.72 Aligned_cols=34 Identities=24% Similarity=0.047 Sum_probs=23.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
++|||+|+..+..+ ....++|.+.||+|..+.+.
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~~~~~i~~Vvt~ 35 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLSSGHNVVGVFTQ 35 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEeC
Confidence 45999999876533 34446666789999877764
No 129
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=52.38 E-value=94 Score=28.85 Aligned_cols=43 Identities=16% Similarity=0.162 Sum_probs=28.9
Q ss_pred CEEEEEcCCCcc---C--HHHHHHHHHHHHhCCCeEEEEeCCchhhhh
Q 011724 10 PHAIAICYPLQG---H--VIPFVNLALKLASSGFTITFVNTHSIHHQI 52 (478)
Q Consensus 10 ~~il~~~~~~~G---H--~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 52 (478)
..|++.|....+ . ..-+..|++.|.++|++|.+++++.-.+..
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~ 228 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAG 228 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHH
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHH
Confidence 356666543121 2 336888999999899999998777655444
No 130
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=52.34 E-value=52 Score=31.11 Aligned_cols=44 Identities=9% Similarity=-0.060 Sum_probs=31.1
Q ss_pred CEEEEEcCCCcc--C--HHHHHHHHHHHHhCCCeEEEEeCCchhhhhh
Q 011724 10 PHAIAICYPLQG--H--VIPFVNLALKLASSGFTITFVNTHSIHHQIT 53 (478)
Q Consensus 10 ~~il~~~~~~~G--H--~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 53 (478)
.-|++.|..++. . ..-+..|++.|.++|++|.+++++.-.+.++
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~ 233 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQ 233 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHH
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHH
Confidence 456666654432 2 3458899999998999999988777666554
No 131
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=51.67 E-value=9.5 Score=36.65 Aligned_cols=38 Identities=24% Similarity=0.139 Sum_probs=30.0
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 5 HKKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 5 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
++.++|||.|+-.+.+| .++|..|++.||+|+++....
T Consensus 25 m~~~~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWG-----TALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp --CCCSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSCH
T ss_pred ccccCCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCCH
Confidence 34456899999888777 468999999999999998753
No 132
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=51.06 E-value=44 Score=27.88 Aligned_cols=34 Identities=18% Similarity=0.024 Sum_probs=21.8
Q ss_pred eEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEC
Q 011724 286 VLYVSFGSYAHASKNDIVEIALGLLLSEVSFVWVLR 321 (478)
Q Consensus 286 ~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~ 321 (478)
.|-|-+||.. +.+..++....|+..+.++=+.+.
T Consensus 5 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~ 38 (163)
T 3ors_A 5 KVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVV 38 (163)
T ss_dssp CEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEE
Confidence 3555566664 455667777777777777655554
No 133
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=50.73 E-value=15 Score=32.12 Aligned_cols=36 Identities=25% Similarity=0.259 Sum_probs=26.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
+||+|++. ++.|.+- ..|++.|.++||+|+.++-..
T Consensus 3 ~m~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 3 KVKKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCCEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSCG
T ss_pred CCCEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcCc
Confidence 35788776 4445443 468899999999999987654
No 134
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=50.59 E-value=10 Score=30.55 Aligned_cols=35 Identities=20% Similarity=0.153 Sum_probs=26.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
+|+||+++-. |.+ -..+|+.|.++||+|+++....
T Consensus 5 ~~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 5 GRYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp -CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECCH
Confidence 4578888865 332 3568999999999999987654
No 135
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=50.47 E-value=9.3 Score=34.81 Aligned_cols=53 Identities=13% Similarity=0.094 Sum_probs=40.1
Q ss_pred ccCcceeeeccCchhhHHHHhc---CcceeccCcccchhHHHHHhhcccCHHHHHHHHHHHhCC
Q 011724 361 HSAIGGFLTHCGWNSIQESIWC---SVPLLCFPLLTDQFTNRKLVKSSITKEEVSEKINRLMSG 421 (478)
Q Consensus 361 ~~~v~~~ItHGG~~s~~Eal~~---GvP~l~~P~~~DQ~~na~rv~~~~t~~~l~~~v~~ll~~ 421 (478)
.+++ +|+=||-||+.+++.. ++|+++++...- .... .+.++++.+++++++.+
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~G~~--Gfl~----~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKAGRL--GFLT----SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEESSSC--CSSC----CBCGGGHHHHHHHHHTT
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEECCCC--CccC----cCCHHHHHHHHHHHHcC
Confidence 4566 9999999999999876 889988874211 1111 35789999999999974
No 136
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=50.46 E-value=12 Score=33.27 Aligned_cols=38 Identities=16% Similarity=-0.081 Sum_probs=33.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|||+|..-+|-|=..=...||..|+++|++|.++=.+.
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 68999777788999999999999999999999986654
No 137
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=50.08 E-value=51 Score=28.96 Aligned_cols=101 Identities=13% Similarity=0.142 Sum_probs=54.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCch-hhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCC
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLASS--GFTITFVNTHSI-HHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDG 83 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 83 (478)
.+|+||+++..+..+- +.+|.+++.+. +++|..+.+... ....+.+.+. +|.+..++..
T Consensus 6 ~~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~---------------gIp~~~~~~~ 67 (215)
T 3kcq_A 6 KKELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLIAQSY---------------GIPTFVVKRK 67 (215)
T ss_dssp -CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHT---------------TCCEEECCBT
T ss_pred CCCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHc---------------CCCEEEeCcc
Confidence 4568998888665433 55666666554 378888777432 1122211244 6776665421
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCc-hhhHHHHHHcCCccEEE
Q 011724 84 LPLNFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFF-VWSSMIAKKYNLVNISF 149 (478)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~-~~~~~~A~~lgiP~v~~ 149 (478)
. . .+ ..+.+.++. .+||+||+-.+. .-...+-....-.++-+
T Consensus 68 ~---~---~~-------------~~~~~~L~~-----~~~Dlivlagy~~IL~~~~l~~~~~~~iNi 110 (215)
T 3kcq_A 68 P---L---DI-------------EHISTVLRE-----HDVDLVCLAGFMSILPEKFVTDWHHKIINI 110 (215)
T ss_dssp T---B---CH-------------HHHHHHHHH-----TTCSEEEESSCCSCCCHHHHHHTTTSEEEE
T ss_pred c---C---Ch-------------HHHHHHHHH-----hCCCEEEEeCCceEeCHHHHhhccCCeEEE
Confidence 0 1 00 122234444 469999998765 33344445555555555
No 138
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=49.96 E-value=45 Score=29.03 Aligned_cols=48 Identities=8% Similarity=-0.069 Sum_probs=34.5
Q ss_pred hhHhHhhcCCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEE
Q 011724 272 SECTQWLNTKPRGSVLYVSFGSYAHASKNDIVEIALGLLLSEVSFVWV 319 (478)
Q Consensus 272 ~~~~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~ 319 (478)
+-+.+|+.....+.++||..++......+.+..+.++|++.|..+.+.
T Consensus 16 ~~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 16 PLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 335566644444679999988776555667888999999999876544
No 139
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=49.10 E-value=16 Score=31.38 Aligned_cols=39 Identities=13% Similarity=0.345 Sum_probs=28.1
Q ss_pred CCCEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeCCc
Q 011724 8 PKPHAIAICYPLQGHVIPFVN-LALKLASSGFTITFVNTHS 47 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~-La~~L~~rGh~Vt~~~~~~ 47 (478)
+||||+++-.- .|+..-+.. +++.|.+.|++|.++--..
T Consensus 3 ~mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 42 (199)
T 2zki_A 3 CKPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVRE 42 (199)
T ss_dssp CCCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CCcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehhH
Confidence 46899888766 887665554 5667777899998886544
No 140
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=48.88 E-value=26 Score=27.00 Aligned_cols=45 Identities=7% Similarity=-0.003 Sum_probs=33.1
Q ss_pred CCEEEEEcCC---CccCHHHHHHHHHHHHhC-CC-eEEEEeCCchhhhhh
Q 011724 9 KPHAIAICYP---LQGHVIPFVNLALKLASS-GF-TITFVNTHSIHHQIT 53 (478)
Q Consensus 9 ~~~il~~~~~---~~GH~~p~l~La~~L~~r-Gh-~Vt~~~~~~~~~~~~ 53 (478)
|+|++++-.. +.......+.+|..+.+. || +|+++..........
T Consensus 1 M~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~~ 50 (117)
T 1jx7_A 1 MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAGL 50 (117)
T ss_dssp CCEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGGB
T ss_pred CcEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHHh
Confidence 4566555533 234567788999999998 99 999999888776665
No 141
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=48.59 E-value=15 Score=34.34 Aligned_cols=37 Identities=16% Similarity=0.231 Sum_probs=28.6
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 5 HKKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 5 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
...+||||.|+-.+..| ..+|+.|++.||+|+++...
T Consensus 17 ~~~~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 17 RGSHMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp -CCCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred ccccCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 35567999999766555 56899999999999987653
No 142
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=48.52 E-value=15 Score=29.98 Aligned_cols=33 Identities=24% Similarity=0.315 Sum_probs=26.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
..||+++-. |++- ..+++.|.++||+|+++...
T Consensus 3 ~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 368888843 5444 67899999999999999885
No 143
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=47.97 E-value=13 Score=30.86 Aligned_cols=37 Identities=16% Similarity=0.177 Sum_probs=29.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCch
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSI 48 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 48 (478)
..++++++. +.| +.|++++++.|.++|.+|+++ ....
T Consensus 23 ~~~~llIaG-G~G-ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 23 FGKILAIGA-YTG-IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp CSEEEEEEE-TTH-HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CCeEEEEEc-cCc-HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 357887774 444 999999999999999999999 6543
No 144
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=47.67 E-value=13 Score=34.44 Aligned_cols=34 Identities=15% Similarity=0.168 Sum_probs=26.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
+||||+|+-.+..| ..+|..|+++||+|+++...
T Consensus 2 ~~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 2 NAMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEECC
Confidence 35899999766556 45789999999999998764
No 145
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=47.64 E-value=11 Score=35.14 Aligned_cols=35 Identities=11% Similarity=0.020 Sum_probs=26.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
.++|||.|+-.+..| ..+|+.|++.||+|+++...
T Consensus 5 ~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 5 GTDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEECC
Confidence 455899999766555 46899999999999988653
No 146
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=47.08 E-value=20 Score=38.04 Aligned_cols=110 Identities=10% Similarity=0.066 Sum_probs=76.2
Q ss_pred CCeEEe-eccChHhhhhccCcceeeeccCchhhHHHHhcCcceeccCcccchhHHHHHhhc-----------ccCHHHHH
Q 011724 345 GRGLIV-PWCSQIDVISHSAIGGFLTHCGWNSIQESIWCSVPLLCFPLLTDQFTNRKLVKS-----------SITKEEVS 412 (478)
Q Consensus 345 ~nv~v~-~~ipq~~vL~~~~v~~~ItHGG~~s~~Eal~~GvP~l~~P~~~DQ~~na~rv~~-----------~~t~~~l~ 412 (478)
+.+.-+ ++.+-.++|..+|+ +||=- ...+.|.+..++|+|....-.|+...-.|--. --+.++|.
T Consensus 598 ~~~~~~~~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d~~~~~pg~~~~~~~eL~ 674 (729)
T 3l7i_A 598 NFAIDVSNYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMNYMEDLPGPIYTEPYGLA 674 (729)
T ss_dssp TTEEECTTCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSSCCSBSSCTTSSSSSCEESSHHHHH
T ss_pred CcEEeCCCCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhccCCcccChhHhCCCCeECCHHHHH
Confidence 344433 66777889999999 99983 45788999999999988765555543211111 56789999
Q ss_pred HHHHHHhCCCChHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 011724 413 EKINRLMSGKSSDELRKNIKEVRKKLENALSADGSSQKNFNQFINDVQ 460 (478)
Q Consensus 413 ~~v~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~i~~~~ 460 (478)
++|.+.... +..|+++.+++.+++-.- +.|.++++.++.+++...
T Consensus 675 ~~i~~~~~~--~~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 675 KELKNLDKV--QQQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HHHTTHHHH--HHHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHH
T ss_pred HHHhhhhcc--chhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCc
Confidence 999887751 356788888888777642 556666666666666554
No 147
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=47.07 E-value=14 Score=34.72 Aligned_cols=41 Identities=12% Similarity=0.083 Sum_probs=30.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhh
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQIT 53 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 53 (478)
.+|||+++-.+..| ..+|..|++.||+|+++..+...+.+.
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~ 58 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIE 58 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHH
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHH
Confidence 45899999888777 567889999999999994444455554
No 148
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=46.44 E-value=13 Score=34.44 Aligned_cols=37 Identities=27% Similarity=0.300 Sum_probs=28.7
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 5 HKKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 5 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
+.++|+||.|+-.+..|+ .+|..|+++||+|+++...
T Consensus 11 ~~~~~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 11 KKIIVKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp -CCCCCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred ccccCCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 345578999998776665 5888999999999988654
No 149
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=46.03 E-value=91 Score=27.32 Aligned_cols=107 Identities=11% Similarity=0.175 Sum_probs=55.3
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCchhh-hhhhhcCCCCCcchhccccCCCCCeEEEEcCCC
Q 011724 6 KKPKPHAIAICYPLQGHVIPFVNLALKLAS-SGFTITFVNTHSIHH-QITKAQSNGDEDDIFAGARKAGLDIRYATVSDG 83 (478)
Q Consensus 6 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 83 (478)
+.+++||+++..+..+- +.+|.++..+ .+++|..+.+..... ..+.+.+. +|.+..++..
T Consensus 2 ~~~~~riavl~SG~Gsn---l~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~---------------gIp~~~~~~~ 63 (215)
T 3tqr_A 2 NREPLPIVVLISGNGTN---LQAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQA---------------DIPTHIIPHE 63 (215)
T ss_dssp --CCEEEEEEESSCCHH---HHHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHT---------------TCCEEECCGG
T ss_pred CCCCcEEEEEEeCCcHH---HHHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHc---------------CCCEEEeCcc
Confidence 35678999888766443 3445555544 368998877743221 12211145 6777665421
Q ss_pred -CCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCc-hhhHHHHHHcCCccEEEe
Q 011724 84 -LPLNFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFF-VWSSMIAKKYNLVNISFW 150 (478)
Q Consensus 84 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~-~~~~~~A~~lgiP~v~~~ 150 (478)
++ +-..+ ...+.+.++. .+||+||+-.+. .-...+-....-.++-+.
T Consensus 64 ~~~-------~r~~~--------d~~~~~~l~~-----~~~Dliv~agy~~il~~~~l~~~~~~~iNiH 112 (215)
T 3tqr_A 64 EFP-------SRTDF--------ESTLQKTIDH-----YDPKLIVLAGFMRKLGKAFVSHYSGRMINIH 112 (215)
T ss_dssp GSS-------SHHHH--------HHHHHHHHHT-----TCCSEEEESSCCSCCCHHHHHHTTTSEEEEE
T ss_pred ccC-------chhHh--------HHHHHHHHHh-----cCCCEEEEccchhhCCHHHHhhccCCeEEeC
Confidence 11 00001 1122233444 569999998765 333444455555555553
No 150
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=45.83 E-value=45 Score=28.24 Aligned_cols=46 Identities=9% Similarity=0.058 Sum_probs=31.2
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 1 MENNHKKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 1 ~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|.+..+.+++||+|+.+++.. ..-+....+.|.+.|++|++++...
T Consensus 1 m~~~~~~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 1 MTKAKDLTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp -----CCTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCCCCCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 444434556899999876654 3455667788888999999999764
No 151
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=45.05 E-value=47 Score=32.53 Aligned_cols=25 Identities=20% Similarity=0.050 Sum_probs=19.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCC
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGF 38 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh 38 (478)
|||||++-.++.. .+||..|++.+.
T Consensus 3 ~mkvlviG~ggre-----~ala~~l~~s~~ 27 (431)
T 3mjf_A 3 AMNILIIGNGGRE-----HALGWKAAQSPL 27 (431)
T ss_dssp CEEEEEEECSHHH-----HHHHHHHTTCTT
T ss_pred CcEEEEECCCHHH-----HHHHHHHHhCCC
Confidence 6999999877544 478999998875
No 152
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=44.63 E-value=19 Score=33.27 Aligned_cols=39 Identities=8% Similarity=0.130 Sum_probs=28.9
Q ss_pred CCEEEEEcCCCccC---HHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 9 KPHAIAICYPLQGH---VIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 9 ~~~il~~~~~~~GH---~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
||||+++..+.... ......++++|+++||+|.++....
T Consensus 1 mm~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~~ 42 (316)
T 1gsa_A 1 MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGD 42 (316)
T ss_dssp CCEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGGG
T ss_pred CceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchhH
Confidence 47999999764221 2344679999999999999987643
No 153
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=44.60 E-value=28 Score=28.43 Aligned_cols=36 Identities=17% Similarity=0.170 Sum_probs=26.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
...++|+++-.+..| ..+|+.|.++|++|+++....
T Consensus 17 ~~~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESCG
T ss_pred cCCCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEECCH
Confidence 345899988544334 457899999999999987643
No 154
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=44.13 E-value=44 Score=30.08 Aligned_cols=39 Identities=13% Similarity=0.197 Sum_probs=29.4
Q ss_pred CCEEEEEcCCCc----------c-CHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 9 KPHAIAICYPLQ----------G-HVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 9 ~~~il~~~~~~~----------G-H~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|+||+++..... | ...=++.-...|.+.|++|+++++..
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g 58 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETG 58 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 679988875531 2 24557777889999999999999754
No 155
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=44.13 E-value=16 Score=34.57 Aligned_cols=33 Identities=15% Similarity=0.060 Sum_probs=26.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
+|||+++-.+..| ..+|..|++.||+|+++...
T Consensus 4 ~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 4899999766555 34788899999999988653
No 156
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=43.22 E-value=19 Score=33.36 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=27.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
+||||.|+-.+..|. .+|+.|++.||+|+++...
T Consensus 2 ~m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 2 HMKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp -CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcCC
Confidence 578999997776664 6789999999999988554
No 157
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=42.77 E-value=1.3e+02 Score=24.86 Aligned_cols=18 Identities=11% Similarity=0.196 Sum_probs=12.6
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 011724 424 SDELRKNIKEVRKKLENA 441 (478)
Q Consensus 424 ~~~~r~~a~~l~~~~~~a 441 (478)
|++.+++.+..++++++.
T Consensus 132 d~~l~~kl~~~r~~~~~~ 149 (159)
T 3rg8_A 132 DKEIADSVKSYMESNAQK 149 (159)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 677777777777766653
No 158
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=42.76 E-value=29 Score=29.62 Aligned_cols=40 Identities=15% Similarity=0.330 Sum_probs=27.4
Q ss_pred CCCEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeCCc
Q 011724 8 PKPHAIAICYPLQGHVIPFVN-LALKLASSGFTITFVNTHS 47 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~-La~~L~~rGh~Vt~~~~~~ 47 (478)
+||||+++-.-..|+..-+.. +++.|.+.|++|.++--..
T Consensus 4 ~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 44 (200)
T 2a5l_A 4 SSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVPA 44 (200)
T ss_dssp -CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCCC
T ss_pred CcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhhh
Confidence 467887776545677665544 6777777899998876544
No 159
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=42.58 E-value=23 Score=27.94 Aligned_cols=34 Identities=24% Similarity=0.258 Sum_probs=25.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
.|||+++-. |.+- ..+|+.|.+.||+|+++....
T Consensus 4 ~m~i~IiG~---G~iG--~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGI---GRVG--YTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECC---CHHH--HHHHHHHHhCCCeEEEEECCH
Confidence 379988843 5543 357899999999999987643
No 160
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=42.58 E-value=96 Score=31.73 Aligned_cols=26 Identities=15% Similarity=0.295 Sum_probs=22.4
Q ss_pred ceeeeccC------chhhHHHHhcCcceeccC
Q 011724 365 GGFLTHCG------WNSIQESIWCSVPLLCFP 390 (478)
Q Consensus 365 ~~~ItHGG------~~s~~Eal~~GvP~l~~P 390 (478)
+++++|.| .+.+.||-+.++|||++-
T Consensus 70 ~v~~~tsGpG~~N~~~gl~~A~~~~vPll~It 101 (590)
T 1v5e_A 70 GVTVGSGGPGASHLINGLYDAAMDNIPVVAIL 101 (590)
T ss_dssp CEEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred EEEEeCcChHHHHHHHHHHHHHhcCCCEEEEc
Confidence 44999998 668999999999999884
No 161
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=42.43 E-value=21 Score=27.13 Aligned_cols=35 Identities=14% Similarity=0.127 Sum_probs=25.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCCc
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSG-FTITFVNTHS 47 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~~~ 47 (478)
++++|+++-.+..| ..+++.|.++| ++|+++....
T Consensus 4 ~~~~v~I~G~G~iG-----~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 4 MRWNICVVGAGKIG-----QMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp TCEEEEEECCSHHH-----HHHHHHHHHCSSEEEEEEESCH
T ss_pred CcCeEEEECCCHHH-----HHHHHHHHhCCCceEEEEeCCH
Confidence 45788887543333 46788999999 9998877644
No 162
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=42.25 E-value=12 Score=32.99 Aligned_cols=36 Identities=14% Similarity=0.098 Sum_probs=27.1
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 6 KKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 6 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
.++||||+|+-.+..| ..+|+.|++.||+|+++...
T Consensus 20 ~m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~r 55 (220)
T 4huj_A 20 FQSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANSR 55 (220)
T ss_dssp GGGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECTT
T ss_pred hhcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 3457899998765555 46889999999999985543
No 163
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=42.09 E-value=32 Score=28.01 Aligned_cols=44 Identities=20% Similarity=0.156 Sum_probs=34.9
Q ss_pred CEEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhh
Q 011724 10 PHAIAIC-YPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQIT 53 (478)
Q Consensus 10 ~~il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 53 (478)
.|++|+. .+..-.+++.+.+|...++.|++|+++.+......+.
T Consensus 8 ~kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l~ 52 (144)
T 2qs7_A 8 KKLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAIT 52 (144)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTB
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHHh
Confidence 3554444 5566788899999999999999999999988776665
No 164
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=42.08 E-value=44 Score=25.87 Aligned_cols=40 Identities=10% Similarity=0.088 Sum_probs=31.2
Q ss_pred CCCCCCEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEe
Q 011724 5 HKKPKPHAIAICYPLQGHVIP-FVNLALKLASSGFTITFVN 44 (478)
Q Consensus 5 ~~~~~~~il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~ 44 (478)
..++|+||+++|..|.|.-.- .-.|-+.+.+.|.++.+-.
T Consensus 17 ~~~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 17 FQGSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp CSCSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred hcccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 456678999999999998875 4567788888999865444
No 165
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=41.72 E-value=18 Score=32.34 Aligned_cols=35 Identities=23% Similarity=0.178 Sum_probs=29.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
..+|||.|+-.+..|- .||..|+++||+|+.+...
T Consensus 4 ~~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CCCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 3458999999888874 5899999999999987764
No 166
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=41.30 E-value=2.2e+02 Score=26.33 Aligned_cols=103 Identities=17% Similarity=0.266 Sum_probs=57.9
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCC--chhhhhhhhcCCCCCcchhccccCCCCCeEEEEcC
Q 011724 6 KKPKPHAIAICYPLQGHVIPFVNLALKLASS--GFTITFVNTH--SIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVS 81 (478)
Q Consensus 6 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 81 (478)
+.+++||+++..+. || -+.+|..+-++. +.+|..+.+. .....++ .. +|.+..+|
T Consensus 102 ~~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~---~~---------------gIp~~~~~ 160 (302)
T 3o1l_A 102 SAQKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVE---WH---------------DIPYYHVP 160 (302)
T ss_dssp TTSCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHH---TT---------------TCCEEECC
T ss_pred cCCCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHH---Hc---------------CCCEEEcC
Confidence 45678999888666 55 466666665442 5788887764 3445554 55 77777765
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCc-hhhHHHHHHcCCccEEE
Q 011724 82 DGLPLNFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFF-VWSSMIAKKYNLVNISF 149 (478)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~-~~~~~~A~~lgiP~v~~ 149 (478)
..... . ..+ ...+.++++. .+||+||.=.+. .-...+...+.-.++-+
T Consensus 161 ~~~~~------r-~~~--------~~~~~~~l~~-----~~~DliVlagym~IL~~~~l~~~~~~~INi 209 (302)
T 3o1l_A 161 VDPKD------K-EPA--------FAEVSRLVGH-----HQADVVVLARYMQILPPQLCREYAHQVINI 209 (302)
T ss_dssp CCSSC------C-HHH--------HHHHHHHHHH-----TTCSEEEESSCCSCCCTTHHHHTTTCEEEE
T ss_pred CCcCC------H-HHH--------HHHHHHHHHH-----hCCCEEEHhHhhhhcCHHHHhhhhCCeEEe
Confidence 32110 0 011 1122234444 469999998765 33334444444445554
No 167
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=41.16 E-value=29 Score=30.81 Aligned_cols=38 Identities=8% Similarity=-0.060 Sum_probs=29.2
Q ss_pred CCCCEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEe
Q 011724 7 KPKPHAIAICY-PLQGHVIPFVNLALKLASSGFTITFVN 44 (478)
Q Consensus 7 ~~~~~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~ 44 (478)
.+|..|++... .+-|-..-...|++.|+++|++|.++=
T Consensus 2 ~~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 2 NAMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TTCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 34545544443 455999999999999999999999974
No 168
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=40.62 E-value=49 Score=25.31 Aligned_cols=38 Identities=5% Similarity=-0.024 Sum_probs=28.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNT 45 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 45 (478)
+|+||+++|..|.|--.-.-.+=+.+.++|.++.+...
T Consensus 2 ~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~ 39 (106)
T 1e2b_A 2 EKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAF 39 (106)
T ss_dssp CCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 35799999987776555555788888889987765543
No 169
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=40.46 E-value=79 Score=32.35 Aligned_cols=25 Identities=20% Similarity=0.351 Sum_probs=21.5
Q ss_pred eeeeccCch------hhHHHHhcCcceeccC
Q 011724 366 GFLTHCGWN------SIQESIWCSVPLLCFP 390 (478)
Q Consensus 366 ~~ItHGG~~------s~~Eal~~GvP~l~~P 390 (478)
++++|.|-| .+.||-+.++|||++-
T Consensus 78 v~~~TsGpG~~N~~~gv~~A~~~~vPll~it 108 (590)
T 1ybh_A 78 ICIATSGPGATNLVSGLADALLDSVPLVAIT 108 (590)
T ss_dssp EEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred EEEeccCchHHHHHHHHHHHHhhCCCEEEEe
Confidence 389999954 7899999999999984
No 170
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=40.39 E-value=26 Score=31.46 Aligned_cols=38 Identities=16% Similarity=0.064 Sum_probs=30.6
Q ss_pred CCCCEEEEEcCC--CccCHHHHHHHHHHHHhCCCeEEEEe
Q 011724 7 KPKPHAIAICYP--LQGHVIPFVNLALKLASSGFTITFVN 44 (478)
Q Consensus 7 ~~~~~il~~~~~--~~GH~~p~l~La~~L~~rGh~Vt~~~ 44 (478)
++|+|.+|++.. +-|=..-.+.|++.|+++|.+|.++=
T Consensus 18 ~~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 18 YFQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp -CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hhcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 456777777643 44899999999999999999999984
No 171
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=40.21 E-value=29 Score=29.46 Aligned_cols=41 Identities=12% Similarity=0.150 Sum_probs=29.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHH-HHHHHHh-CCCeEEEEeCCc
Q 011724 7 KPKPHAIAICYPLQGHVIPFVN-LALKLAS-SGFTITFVNTHS 47 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~-La~~L~~-rGh~Vt~~~~~~ 47 (478)
+.||||+++-.-..|+..-+.. +++.|.+ .|++|.++--..
T Consensus 2 ~~M~kiliiy~S~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~~ 44 (188)
T 2ark_A 2 NAMGKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVDE 44 (188)
T ss_dssp CCCEEEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEETTT
T ss_pred CCCCEEEEEEECCCcHHHHHHHHHHHHHhhcCCCeEEEEEhhh
Confidence 4578998876555677665554 6777877 899998887554
No 172
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=40.08 E-value=1.9e+02 Score=25.17 Aligned_cols=104 Identities=12% Similarity=0.121 Sum_probs=55.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCchh-hhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCCCC
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASS--GFTITFVNTHSIH-HQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLPL 86 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 86 (478)
|||+++..+..+ -+.+|.+++++. +|+|..+.+.... ...+.+.+. +|.+..++...
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~---------------gIp~~~~~~~~-- 60 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQA---------------GIATHTLIASA-- 60 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHT---------------TCEEEECCGGG--
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHc---------------CCcEEEeCccc--
Confidence 578888766554 367788888775 6898777765322 122211144 77777653210
Q ss_pred CCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCc-hhhHHHHHHcCCccEEEe
Q 011724 87 NFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFF-VWSSMIAKKYNLVNISFW 150 (478)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~-~~~~~~A~~lgiP~v~~~ 150 (478)
. .+- ..... ++++.+++ .+||+||+-.+. .-...+-......++-+.
T Consensus 61 -~---~~r--------~~~~~---~~~~~l~~--~~~Dliv~agy~~il~~~~l~~~~~~~iNiH 108 (212)
T 1jkx_A 61 -F---DSR--------EAYDR---ELIHEIDM--YAPDVVVLAGFMRILSPAFVSHYAGRLLNIH 108 (212)
T ss_dssp -C---SSH--------HHHHH---HHHHHHGG--GCCSEEEESSCCSCCCHHHHHHTTTSEEEEE
T ss_pred -c---cch--------hhccH---HHHHHHHh--cCCCEEEEeChhhhCCHHHHhhccCCEEEEc
Confidence 0 010 01111 23344443 569999998765 333444455555555553
No 173
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=40.00 E-value=37 Score=30.28 Aligned_cols=32 Identities=6% Similarity=-0.079 Sum_probs=23.5
Q ss_pred CccEEEE-cCCc-hhhHHHHHHcCCccEEEecch
Q 011724 122 EMNCLVT-DTFF-VWSSMIAKKYNLVNISFWTEP 153 (478)
Q Consensus 122 ~pD~vi~-D~~~-~~~~~~A~~lgiP~v~~~~~~ 153 (478)
.||+||+ |... .-+..=|.++|||+|.++.+.
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDTn 190 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDTN 190 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCSS
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecCC
Confidence 5888875 5433 456666999999999997543
No 174
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=39.91 E-value=29 Score=32.24 Aligned_cols=32 Identities=16% Similarity=0.223 Sum_probs=27.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNT 45 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 45 (478)
|+||.|+-.+-.|. ++|+.|.+.||+|+++--
T Consensus 3 M~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr 34 (300)
T 3obb_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (300)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred cCEEEEeeehHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 57999999888774 789999999999998743
No 175
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=39.71 E-value=16 Score=34.13 Aligned_cols=36 Identities=11% Similarity=0.048 Sum_probs=26.5
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEeCC
Q 011724 6 KKPKPHAIAICYPLQGHVIPFVNLALKLASSGF-TITFVNTH 46 (478)
Q Consensus 6 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh-~Vt~~~~~ 46 (478)
+++||||.|+-.+..| ..+|+.|++.|| +|+++...
T Consensus 21 ~~~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 21 QSNAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp ----CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECSS
T ss_pred cCCCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcCC
Confidence 3456899999776556 478999999999 99988764
No 176
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=39.60 E-value=22 Score=31.34 Aligned_cols=39 Identities=13% Similarity=0.134 Sum_probs=24.3
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCCc
Q 011724 6 KKPKPHAIAICYPLQGHVIPFVNLALKLASSG-FTITFVNTHS 47 (478)
Q Consensus 6 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~~~ 47 (478)
++.||+.++++ ++.|-+- .+|++.|+++| |+|+.++-..
T Consensus 19 ~~~~mk~vlVt-GatG~iG--~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 19 FQGHMKNVLIL-GAGGQIA--RHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp ---CCEEEEEE-TTTSHHH--HHHHHHHTTCTTEEEEEEESSG
T ss_pred ecCcccEEEEE-eCCcHHH--HHHHHHHHhCCCceEEEEEcCh
Confidence 34445555555 3334332 46899999999 9999887653
No 177
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=39.44 E-value=37 Score=26.38 Aligned_cols=59 Identities=8% Similarity=0.071 Sum_probs=44.3
Q ss_pred hhccCcceeeeccCchh---------hHHHHhcCcceeccCcccch--hHHHHHhhc---ccCHHHHHHHHHHHh
Q 011724 359 ISHSAIGGFLTHCGWNS---------IQESIWCSVPLLCFPLLTDQ--FTNRKLVKS---SITKEEVSEKINRLM 419 (478)
Q Consensus 359 L~~~~v~~~ItHGG~~s---------~~Eal~~GvP~l~~P~~~DQ--~~na~rv~~---~~t~~~l~~~v~~ll 419 (478)
+..+++ +|--.|..| +..|...|+|++++=.+..+ |..-..... ..+.+.|.++|+..+
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~~P~~l~~~a~~iV~Wn~~~I~~aI~~~~ 108 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLENVPPELEAVSSEVVGWNPHCIRDALEDAL 108 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSCCCTTHHHHCSEEECSCHHHHHHHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCcCCHHHHhhCceeccCCHHHHHHHHHhcc
Confidence 456777 999999887 66788899999988877765 333222222 788999999999876
No 178
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=39.37 E-value=31 Score=27.85 Aligned_cols=39 Identities=15% Similarity=0.269 Sum_probs=26.8
Q ss_pred CCEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeCCc
Q 011724 9 KPHAIAICYPLQGHVIPFVN-LALKLASSGFTITFVNTHS 47 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~-La~~L~~rGh~Vt~~~~~~ 47 (478)
||||+++-.-..|+..-+.. |++.|.++|++|.++....
T Consensus 1 M~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 40 (148)
T 3f6r_A 1 MSKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAAD 40 (148)
T ss_dssp -CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhh
Confidence 46776665555787665444 6777888899999886554
No 179
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=39.32 E-value=1.8e+02 Score=24.71 Aligned_cols=35 Identities=11% Similarity=-0.015 Sum_probs=23.9
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEC
Q 011724 285 SVLYVSFGSYAHASKNDIVEIALGLLLSEVSFVWVLR 321 (478)
Q Consensus 285 ~~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~ 321 (478)
|.|-|-+||.. +.+..++....|+..+.++=+.+.
T Consensus 14 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~ 48 (183)
T 1o4v_A 14 PRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIV 48 (183)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEE
Confidence 56777777765 455667777777788877655554
No 180
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=39.11 E-value=34 Score=31.88 Aligned_cols=56 Identities=13% Similarity=0.160 Sum_probs=38.4
Q ss_pred hhhccCcceeeeccCchhhHHHHhc----CcceeccCcccchhHHHHHhhcccCHHHHHHHHHHHhCC
Q 011724 358 VISHSAIGGFLTHCGWNSIQESIWC----SVPLLCFPLLTDQFTNRKLVKSSITKEEVSEKINRLMSG 421 (478)
Q Consensus 358 vL~~~~v~~~ItHGG~~s~~Eal~~----GvP~l~~P~~~DQ~~na~rv~~~~t~~~l~~~v~~ll~~ 421 (478)
....+++ +|+-||-||+.+++.. ++|++.++... ..-+. .+.++++.+++++++.+
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~G~-----~gfl~-~~~~~~~~~~~~~i~~g 131 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNLGR-----IGFLA-EAEAEAIDAVLEHVVAQ 131 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEECSS-----CCSSC-SEEGGGHHHHHHHHHHT
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeCCC-----CccCc-ccCHHHHHHHHHHHHcC
Confidence 4456677 9999999999999754 89999998521 11111 24578888888888864
No 181
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=38.70 E-value=86 Score=32.80 Aligned_cols=26 Identities=19% Similarity=0.422 Sum_probs=22.1
Q ss_pred ceeeeccCc------hhhHHHHhcCcceeccC
Q 011724 365 GGFLTHCGW------NSIQESIWCSVPLLCFP 390 (478)
Q Consensus 365 ~~~ItHGG~------~s~~Eal~~GvP~l~~P 390 (478)
+++++|.|- +.+.||-+.++|||++-
T Consensus 147 gvv~~TsGpG~~N~~~gia~A~~d~vPllvIt 178 (677)
T 1t9b_A 147 GVVLVTSGPGATNVVTPMADAFADGIPMVVFT 178 (677)
T ss_dssp EEEEECSTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred EEEEECCChHHHHHHHHHHHHHHcCCCEEEEe
Confidence 348999986 58999999999999984
No 182
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=38.22 E-value=1.2e+02 Score=30.74 Aligned_cols=25 Identities=12% Similarity=0.062 Sum_probs=21.8
Q ss_pred eeeeccCc------hhhHHHHhcCcceeccC
Q 011724 366 GFLTHCGW------NSIQESIWCSVPLLCFP 390 (478)
Q Consensus 366 ~~ItHGG~------~s~~Eal~~GvP~l~~P 390 (478)
++++|.|- +.+.||-+.++|||++-
T Consensus 76 v~~~TsGpG~~N~~~~l~~A~~~~vPll~it 106 (566)
T 1ozh_A 76 VALVTSGPGCSNLITGMATANSEGDPVVALG 106 (566)
T ss_dssp EEEECSTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred EEEEccChHHHHHHHHHHHHHhcCCCEEEEe
Confidence 38999886 68999999999999884
No 183
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=37.76 E-value=22 Score=34.04 Aligned_cols=30 Identities=27% Similarity=0.268 Sum_probs=25.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVN 44 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 44 (478)
|||+|+-.+-.| +.+|..|+++|++|+++=
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEEe
Confidence 899998766445 778999999999999983
No 184
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=37.56 E-value=40 Score=29.07 Aligned_cols=40 Identities=10% Similarity=0.142 Sum_probs=27.9
Q ss_pred CCCEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeCCc
Q 011724 8 PKPHAIAICYPLQGHVIPFVN-LALKLASSGFTITFVNTHS 47 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~-La~~L~~rGh~Vt~~~~~~ 47 (478)
+||||+++-.-..|+..-+.. +++.|.+.|++|.++--..
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 45 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVRE 45 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEeccc
Confidence 568987776544777666554 6777777899988775433
No 185
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=37.32 E-value=30 Score=30.14 Aligned_cols=39 Identities=3% Similarity=0.018 Sum_probs=21.2
Q ss_pred CCCCCEEEEEcCC-C--c-cCHHHHHH-HHHHHHhC--CCeEEEEe
Q 011724 6 KKPKPHAIAICYP-L--Q-GHVIPFVN-LALKLASS--GFTITFVN 44 (478)
Q Consensus 6 ~~~~~~il~~~~~-~--~-GH~~p~l~-La~~L~~r--Gh~Vt~~~ 44 (478)
+++||||+++..- - . |...-+.. +++.|.++ |++|+++-
T Consensus 1 ~~mM~kiLiI~gSpr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~d 46 (211)
T 3p0r_A 1 SNAMTKVLFVKANNRPAEQAVSVKLYEAFLASYKEAHPNDTVVELD 46 (211)
T ss_dssp ---CCEEEEEECCCSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred CcccCEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 3568899887733 3 2 33333332 45666555 88887754
No 186
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=37.25 E-value=19 Score=32.77 Aligned_cols=36 Identities=17% Similarity=0.106 Sum_probs=26.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCch
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSI 48 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 48 (478)
+||||++.- + |.+- ..|++.|.++||+|+.++-...
T Consensus 4 m~~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 4 MTGTLLSFG--H-GYTA--RVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp -CCEEEEET--C-CHHH--HHHHHHHGGGTCEEEEEESCGG
T ss_pred CcCcEEEEC--C-cHHH--HHHHHHHHHCCCEEEEEEcChh
Confidence 357887774 4 5444 3578999999999999987553
No 187
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=37.17 E-value=34 Score=31.79 Aligned_cols=37 Identities=11% Similarity=0.146 Sum_probs=25.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
.++|+|++.- +.|.+- ..|++.|.++||+|+.++-..
T Consensus 11 ~~~M~ilVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~~ 47 (342)
T 2x4g_A 11 GAHVKYAVLG--ATGLLG--HHAARAIRAAGHDLVLIHRPS 47 (342)
T ss_dssp -CCCEEEEES--TTSHHH--HHHHHHHHHTTCEEEEEECTT
T ss_pred ccCCEEEEEC--CCcHHH--HHHHHHHHHCCCEEEEEecCh
Confidence 3457877764 444332 457889999999999987643
No 188
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=36.91 E-value=27 Score=33.91 Aligned_cols=60 Identities=22% Similarity=0.344 Sum_probs=42.1
Q ss_pred ChHhhhhccCcceeeeccCchhhHHHHhc----Cc-ceeccCcccchhHHHHHhhcccCHHHHHHHHHHHhCC
Q 011724 354 SQIDVISHSAIGGFLTHCGWNSIQESIWC----SV-PLLCFPLLTDQFTNRKLVKSSITKEEVSEKINRLMSG 421 (478)
Q Consensus 354 pq~~vL~~~~v~~~ItHGG~~s~~Eal~~----Gv-P~l~~P~~~DQ~~na~rv~~~~t~~~l~~~v~~ll~~ 421 (478)
+...+-..+++ +|+=||-||+..|+.. ++ |+|.+....--+. . .+..+++.+++.+++.|
T Consensus 107 ~~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G~lGFL-----t-~~~~~~~~~al~~il~g 171 (388)
T 3afo_A 107 PEQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFALGTLGFL-----S-PFDFKEHKKVFQEVISS 171 (388)
T ss_dssp CHHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEECSSCCSS-----C-CEEGGGHHHHHHHHHTT
T ss_pred chhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEECCCcccC-----C-cCChHHHHHHHHHHhcC
Confidence 34455567788 9999999999999653 67 7888864311000 0 35568899999999874
No 189
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=36.85 E-value=30 Score=31.10 Aligned_cols=38 Identities=21% Similarity=0.071 Sum_probs=31.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
|+.|.|..-+|-|-..-...||..|+++|++|.++=.+
T Consensus 1 M~vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 1 MRQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred CcEEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 35566766778899999999999999999999988554
No 190
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=36.65 E-value=33 Score=30.52 Aligned_cols=39 Identities=15% Similarity=0.111 Sum_probs=31.1
Q ss_pred CCEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 9 KPHAIAIC--YPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 9 ~~~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|+|++.+. -++-|-..-...||..|+++|++|.++=.+.
T Consensus 1 M~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 1 MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp -CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 45665554 4567999999999999999999999987664
No 191
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=36.59 E-value=34 Score=31.26 Aligned_cols=39 Identities=15% Similarity=0.159 Sum_probs=31.3
Q ss_pred CCEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 9 KPHAIAIC--YPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 9 ~~~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|+|++.+. -++-|-..-...||..|+++|++|.++=.+.
T Consensus 3 M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 3 ETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp -CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 56665554 4677999999999999999999999887665
No 192
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=36.42 E-value=15 Score=35.08 Aligned_cols=32 Identities=16% Similarity=0.134 Sum_probs=26.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
|||+|+-.+..| ..+|..|++.||+|+++...
T Consensus 16 ~kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 16 NKAVVFGSGAFG-----TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEEECCSHHH-----HHHHHHHTTTEEEEEEECSC
T ss_pred CeEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 399999877666 46789999999999998764
No 193
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=36.41 E-value=2.1e+02 Score=25.15 Aligned_cols=40 Identities=10% Similarity=0.047 Sum_probs=30.1
Q ss_pred CEEEEEcCCCccCHHHHHHHH------HHHHhCC-CeEEEEeCCchh
Q 011724 10 PHAIAICYPLQGHVIPFVNLA------LKLASSG-FTITFVNTHSIH 49 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La------~~L~~rG-h~Vt~~~~~~~~ 49 (478)
++.++++.|+.+.++.++.-+ +.|++.| .+|++.+.....
T Consensus 28 ~~~VlVtgGS~~~~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~ 74 (224)
T 2jzc_A 28 EKALFVTCGATVPFPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS 74 (224)
T ss_dssp SCCEEEECCSCCSCHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch
Confidence 456777778887788887755 8888888 788888876543
No 194
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=36.37 E-value=34 Score=31.81 Aligned_cols=41 Identities=22% Similarity=0.224 Sum_probs=22.4
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011724 1 MENNHKKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNT 45 (478)
Q Consensus 1 ~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 45 (478)
|...++..+++|++. |+.|-+- ..|+++|.++||+|+.+.-
T Consensus 1 ~~~~~~~~~~~vlVT--GatGfIG--~~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 1 MATQHPIGKKTACVV--GGTGFVA--SLLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp --------CCEEEEE--CTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCcCcCCCCCEEEEE--CCchHHH--HHHHHHHHHCCCEEEEEEc
Confidence 444444445676655 3444333 3578999999999987654
No 195
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=36.07 E-value=37 Score=29.72 Aligned_cols=39 Identities=21% Similarity=0.185 Sum_probs=30.6
Q ss_pred CCEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 9 KPHAIAIC--YPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 9 ~~~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|+|++.+. -++-|-..-...||..|+++|++|.++-.+.
T Consensus 1 M~~~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CceEEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 34554443 4577999999999999999999999997654
No 196
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=35.90 E-value=1.1e+02 Score=25.93 Aligned_cols=37 Identities=14% Similarity=0.065 Sum_probs=25.5
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEECCC
Q 011724 285 SVLYVSFGSYAHASKNDIVEIALGLLLSEVSFVWVLRPD 323 (478)
Q Consensus 285 ~~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 323 (478)
+.|-|-+||.. +....++....|+..+.++=+.+.+-
T Consensus 22 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa 58 (182)
T 1u11_A 22 PVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSA 58 (182)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 34666677765 55667788888888888766655433
No 197
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=35.48 E-value=34 Score=31.80 Aligned_cols=35 Identities=9% Similarity=0.112 Sum_probs=28.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchh
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIH 49 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 49 (478)
+|||+++..+ ....++++++++||+|.++......
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~~~ 36 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSKVK 36 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGGGH
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCCCC
Confidence 3799998865 4678999999999999998876543
No 198
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=35.27 E-value=31 Score=30.94 Aligned_cols=41 Identities=27% Similarity=0.249 Sum_probs=31.4
Q ss_pred CCCEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCch
Q 011724 8 PKPHAIAIC--YPLQGHVIPFVNLALKLASSGFTITFVNTHSI 48 (478)
Q Consensus 8 ~~~~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 48 (478)
++++++.+. -++-|-..-...||..|+++|++|.++=.+..
T Consensus 4 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 46 (257)
T 1wcv_1 4 AKVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQ 46 (257)
T ss_dssp -CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 345555444 55778999999999999999999999876543
No 199
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=35.18 E-value=35 Score=26.71 Aligned_cols=47 Identities=11% Similarity=-0.012 Sum_probs=31.9
Q ss_pred CCCCCCEEEEEcCCCc-cCH-HHHHHHHHHHHhCC--CeEEEEeCCchhhhh
Q 011724 5 HKKPKPHAIAICYPLQ-GHV-IPFVNLALKLASSG--FTITFVNTHSIHHQI 52 (478)
Q Consensus 5 ~~~~~~~il~~~~~~~-GH~-~p~l~La~~L~~rG--h~Vt~~~~~~~~~~~ 52 (478)
++.+ +|++|+-.-+. -.. +..+..|...+++| |+|.++........+
T Consensus 4 ~~~~-~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v~L~ 54 (117)
T 2fb6_A 4 MSAN-DKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGASVKLV 54 (117)
T ss_dssp SSTT-SEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHHHHH
T ss_pred cccC-CeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCeeeec
Confidence 3344 77777665543 332 44677888888998 899999887765543
No 200
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=35.16 E-value=2.4e+02 Score=24.94 Aligned_cols=40 Identities=5% Similarity=-0.124 Sum_probs=23.7
Q ss_pred CCCCCEEEEEcCCCccCHH-H-HHHHHHHHHhCCCeEEEEeC
Q 011724 6 KKPKPHAIAICYPLQGHVI-P-FVNLALKLASSGFTITFVNT 45 (478)
Q Consensus 6 ~~~~~~il~~~~~~~GH~~-p-~l~La~~L~~rGh~Vt~~~~ 45 (478)
+++..+|+++.......+. . ...+-+++.++|+++.+...
T Consensus 2 s~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 43 (291)
T 3l49_A 2 SLEGKTIGITAIGTDHDWDLKAYQAQIAEIERLGGTAIALDA 43 (291)
T ss_dssp CCTTCEEEEEESCCSSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEcC
Confidence 4566788777644332222 2 34466667778888777644
No 201
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=34.94 E-value=39 Score=30.98 Aligned_cols=34 Identities=18% Similarity=0.140 Sum_probs=25.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
++|||+|+-.+..|. .+|+.|.+.||+|+++...
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 458999997766664 4688888999999876543
No 202
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=34.92 E-value=27 Score=32.51 Aligned_cols=39 Identities=18% Similarity=-0.047 Sum_probs=30.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCch-hhhhh
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSI-HHQIT 53 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~-~~~~~ 53 (478)
+|||+|+-.++.|- .+|..|+ .||+|+++..... .+.+.
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~~~~~~l~ 41 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQEQAAAIQ 41 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCHHHHHHHH
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCHHHHHHHH
Confidence 38999998887774 5688888 9999999987653 35555
No 203
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=34.75 E-value=42 Score=30.36 Aligned_cols=33 Identities=18% Similarity=0.245 Sum_probs=24.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
||||++.- + |.+- ..|++.|.++||+|+.++-.
T Consensus 3 ~~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 3 LSKILIAG--C-GDLG--LELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCEEEEC--C-SHHH--HHHHHHHHHTTCCEEEEECT
T ss_pred CCcEEEEC--C-CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 47888773 3 6333 46889999999999998754
No 204
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=34.68 E-value=63 Score=32.53 Aligned_cols=24 Identities=13% Similarity=0.095 Sum_probs=20.3
Q ss_pred eeeeccCc------hhhHHHHhcCcceecc
Q 011724 366 GFLTHCGW------NSIQESIWCSVPLLCF 389 (478)
Q Consensus 366 ~~ItHGG~------~s~~Eal~~GvP~l~~ 389 (478)
++++|.|- +.+.||-+.++|||++
T Consensus 66 v~~~tsGpG~~N~~~~l~~A~~~~~Pll~i 95 (528)
T 1q6z_A 66 FINLHSAAGTGNAMGALSNAWNSHSPLIVT 95 (528)
T ss_dssp EEEEEHHHHHHHTHHHHHHHHHTTCCEEEE
T ss_pred EEEEcCChHHHHHHHHHHHHhhcCCCEEEE
Confidence 38888774 4789999999999999
No 205
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=34.32 E-value=85 Score=26.66 Aligned_cols=42 Identities=7% Similarity=0.060 Sum_probs=32.0
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 5 HKKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 5 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
.+.+++||+|+.+++..- .-+....+.|.+.|++|++++...
T Consensus 19 ~~~~~~kV~ill~~g~~~-~e~~~~~~~l~~ag~~v~~vs~~~ 60 (193)
T 1oi4_A 19 KAGLSKKIAVLITDEFED-SEFTSPADEFRKAGHEVITIEKQA 60 (193)
T ss_dssp TTTCCCEEEEECCTTBCT-HHHHHHHHHHHHTTCEEEEEESST
T ss_pred hhccCCEEEEEECCCCCH-HHHHHHHHHHHHCCCEEEEEECCC
Confidence 345568999999876653 345567778888999999999765
No 206
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=34.32 E-value=35 Score=31.21 Aligned_cols=33 Identities=9% Similarity=0.111 Sum_probs=25.6
Q ss_pred CCEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 9 KPHAIAICY-PLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 9 ~~~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
||||+|+-. +..| ..+|+.|++.||+|+++...
T Consensus 11 mm~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 11 PKTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CCEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECCS
T ss_pred CCEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 579999876 6555 45788999999999977543
No 207
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=34.13 E-value=65 Score=28.83 Aligned_cols=39 Identities=18% Similarity=0.320 Sum_probs=28.6
Q ss_pred CCEEEEEcCCCc----------c-CHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 9 KPHAIAICYPLQ----------G-HVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 9 ~~~il~~~~~~~----------G-H~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|+||+++..... | ...=+..-...|.+.|++|+++++..
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g 52 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETG 52 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 578988876421 2 23456777888999999999999754
No 208
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=33.72 E-value=74 Score=31.31 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=27.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNT 45 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 45 (478)
-+.+||+|+-.+..| .++|+.|+++||+|+..=.
T Consensus 7 ~~~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 7 FENKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TTTCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred cCCCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 345899999886655 2469999999999998765
No 209
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=33.70 E-value=40 Score=30.91 Aligned_cols=32 Identities=13% Similarity=0.261 Sum_probs=24.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
|||+|+-.+..|. .+|..|.+.||+|+++...
T Consensus 6 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGK-----PMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECchHHHH-----HHHHHHHhCCCEEEEEeCC
Confidence 7999998766664 4688898999999877543
No 210
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=33.67 E-value=45 Score=28.25 Aligned_cols=39 Identities=13% Similarity=0.302 Sum_probs=26.8
Q ss_pred CCEEEEEcCCCccCHHHHHH-HHHHHHh-CCCeEEEEeCCc
Q 011724 9 KPHAIAICYPLQGHVIPFVN-LALKLAS-SGFTITFVNTHS 47 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~-La~~L~~-rGh~Vt~~~~~~ 47 (478)
||||+++-.--.|+..-+.. +++.|.+ .|++|.++--..
T Consensus 1 Mmkilii~~S~~g~t~~la~~i~~~l~~~~g~~v~~~~l~~ 41 (198)
T 3b6i_A 1 MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPE 41 (198)
T ss_dssp -CEEEEEECCSSSHHHHHHHHHHHHHHTSTTCEEEEEECCC
T ss_pred CCeEEEEEeCCCcHHHHHHHHHHHHHhhcCCCEEEEEEccc
Confidence 57887776555677666554 6777777 899988876543
No 211
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=33.57 E-value=47 Score=28.66 Aligned_cols=45 Identities=11% Similarity=0.102 Sum_probs=35.1
Q ss_pred HHHHHHHHHhhccCCCccEEEEcCCchhhHHHHHHcCCccEEEecchhHH
Q 011724 107 AHVDELVGNLIQLNPEMNCLVTDTFFVWSSMIAKKYNLVNISFWTEPALV 156 (478)
Q Consensus 107 ~~~~~ll~~l~~~~~~pD~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~ 156 (478)
..+++.++.+++ .+.|+||.|. .+..+|+++|+|.+.+.++..+.
T Consensus 129 ~e~~~~i~~l~~--~G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~eSI 173 (196)
T 2q5c_A 129 DEITTLISKVKT--ENIKIVVSGK---TVTDEAIKQGLYGETINSGEESL 173 (196)
T ss_dssp GGHHHHHHHHHH--TTCCEEEECH---HHHHHHHHTTCEEEECCCCHHHH
T ss_pred HHHHHHHHHHHH--CCCeEEECCH---HHHHHHHHcCCcEEEEecCHHHH
Confidence 355667777776 6799999985 45789999999999998866553
No 212
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=33.28 E-value=49 Score=31.40 Aligned_cols=42 Identities=19% Similarity=0.153 Sum_probs=35.2
Q ss_pred CCCCEEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCch
Q 011724 7 KPKPHAIAIC-YPLQGHVIPFVNLALKLASSGFTITFVNTHSI 48 (478)
Q Consensus 7 ~~~~~il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 48 (478)
++|++|+|++ -+|-|-..-..+||..|+++|++|.++..+..
T Consensus 23 ~~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 23 KDGTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp SCSCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred cCCCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 4556776665 56779999999999999999999999998773
No 213
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=33.25 E-value=46 Score=25.59 Aligned_cols=39 Identities=13% Similarity=0.170 Sum_probs=29.2
Q ss_pred CCCCCEEEEEcCCCccCHHHHH-HHHHHHHhCCCe-EEEEe
Q 011724 6 KKPKPHAIAICYPLQGHVIPFV-NLALKLASSGFT-ITFVN 44 (478)
Q Consensus 6 ~~~~~~il~~~~~~~GH~~p~l-~La~~L~~rGh~-Vt~~~ 44 (478)
.++|+||+++|..|.|+-.-+. .|-+.+.++|.+ +.+-.
T Consensus 15 ~~~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~ 55 (110)
T 3czc_A 15 RGSMVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESAS 55 (110)
T ss_dssp ---CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred ccCCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 4457899999999999888877 677788889987 65433
No 214
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=33.20 E-value=1.1e+02 Score=26.92 Aligned_cols=44 Identities=7% Similarity=0.014 Sum_probs=28.9
Q ss_pred eEEeeccCh-Hh-hhhccCcceeeeccCchhhHHHH---------hcCcceeccCc
Q 011724 347 GLIVPWCSQ-ID-VISHSAIGGFLTHCGWNSIQESI---------WCSVPLLCFPL 391 (478)
Q Consensus 347 v~v~~~ipq-~~-vL~~~~v~~~ItHGG~~s~~Eal---------~~GvP~l~~P~ 391 (478)
+.++...+. .. +...++. .++--||.||+-|.. .+++|++++-.
T Consensus 89 ~~~~~~~~~Rk~~~~~~sda-~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 89 VRVVADMHERKAAMAQEAEA-FIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEEESSHHHHHHHHHHHCSE-EEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred ccccCCHHHHHHHHHHhCCE-EEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 445555553 33 3344554 466788999988776 47999999874
No 215
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=33.20 E-value=77 Score=27.56 Aligned_cols=38 Identities=8% Similarity=0.137 Sum_probs=28.2
Q ss_pred CEEEEEcCC---------CccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 10 PHAIAICYP---------LQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 10 ~~il~~~~~---------~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
+||+|+... ..-...-+....+.|.+.|++|++++...
T Consensus 6 ~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~~ 52 (224)
T 1u9c_A 6 KRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQG 52 (224)
T ss_dssp CEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCCC
Confidence 689888762 22244566777888889999999999765
No 216
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=32.80 E-value=35 Score=30.99 Aligned_cols=33 Identities=9% Similarity=-0.068 Sum_probs=25.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|||+|+-.+..| ..+|..|++.||+|+++....
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSSC
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcCc
Confidence 578888766555 368899999999999986543
No 217
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=32.67 E-value=50 Score=25.32 Aligned_cols=35 Identities=9% Similarity=0.057 Sum_probs=26.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEE
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITF 42 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~ 42 (478)
+.|||+++|..|.|+-.-.-.|-+.+.++|.++.+
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i 37 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATI 37 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEE
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEE
Confidence 34889999999888885555677778888986554
No 218
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=32.58 E-value=37 Score=29.43 Aligned_cols=34 Identities=9% Similarity=0.126 Sum_probs=25.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
.+|+|+|+-.+..| ..+|..|+++||+|+++...
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcCC
Confidence 35899998765555 56789999999999988643
No 219
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=32.44 E-value=34 Score=31.25 Aligned_cols=33 Identities=21% Similarity=0.245 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
||||.|+-.+..| ..+|+.|++.||+|+++...
T Consensus 1 M~~I~iiG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pdu_A 1 MTTYGFLGLGIMG-----GPMAANLVRAGFDVTVWNRN 33 (287)
T ss_dssp CCCEEEECCSTTH-----HHHHHHHHHHTCCEEEECSS
T ss_pred CCeEEEEccCHHH-----HHHHHHHHHCCCeEEEEcCC
Confidence 5789999777666 35788999999999988654
No 220
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=32.37 E-value=38 Score=31.38 Aligned_cols=30 Identities=17% Similarity=0.186 Sum_probs=24.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVN 44 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 44 (478)
.||.|+-.+-.| .++|+.|.++||+|+++-
T Consensus 6 ~kIgfIGLG~MG-----~~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 6 EKIAFLGLGNLG-----TPIAEILLEAGYELVVWN 35 (297)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEC-
T ss_pred CcEEEEecHHHH-----HHHHHHHHHCCCeEEEEe
Confidence 489999887777 478999999999998763
No 221
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=32.31 E-value=44 Score=30.77 Aligned_cols=40 Identities=10% Similarity=-0.046 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
+++.|+|..-+|-|=..-...||..|+++|++|.++=.+.
T Consensus 40 ~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 79 (307)
T 3end_A 40 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 79 (307)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3345556656677999999999999999999999987653
No 222
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=32.30 E-value=40 Score=30.98 Aligned_cols=38 Identities=11% Similarity=0.047 Sum_probs=24.1
Q ss_pred CCCCEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEe
Q 011724 7 KPKPHAIAICYPLQGHVIP-FVNLALKLASSGFTITFVN 44 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~ 44 (478)
..|+||+++..|..++... ...+.+.|.++|++|.+..
T Consensus 3 ~~mkki~ii~np~~~~~~~~~~~i~~~l~~~g~~v~~~~ 41 (292)
T 2an1_A 3 NHFKCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVEQ 41 (292)
T ss_dssp -CCCEEEEECC-------CHHHHHHHHHHHTTCEEEEEH
T ss_pred CcCcEEEEEEcCCCHHHHHHHHHHHHHHHHCCCEEEEec
Confidence 3468999999988766555 4558899999999987753
No 223
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=32.28 E-value=91 Score=31.57 Aligned_cols=25 Identities=20% Similarity=0.310 Sum_probs=21.7
Q ss_pred eeeeccCch------hhHHHHhcCcceeccC
Q 011724 366 GFLTHCGWN------SIQESIWCSVPLLCFP 390 (478)
Q Consensus 366 ~~ItHGG~~------s~~Eal~~GvP~l~~P 390 (478)
++++|.|-| .+.||-+.++|||++-
T Consensus 69 v~~~TsGpG~~N~~~gi~~A~~~~vPvl~it 99 (549)
T 3eya_A 69 VCAGSCGPGNLHLINGLFDCHRNHVPVLAIA 99 (549)
T ss_dssp EEEECTTHHHHTTHHHHHHHHHTTCCEEEEE
T ss_pred EEEeCCCCcHhhhHHHHHHHHhhCCCEEEEe
Confidence 389999865 8999999999999884
No 224
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=32.25 E-value=54 Score=33.58 Aligned_cols=45 Identities=11% Similarity=0.028 Sum_probs=39.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhh
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQI 52 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 52 (478)
...+|++.+.++..|-....-++..|..+|++|+.++.....+.+
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~i 141 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKI 141 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 357999999999999999999999999999999999886655554
No 225
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=32.25 E-value=82 Score=25.27 Aligned_cols=45 Identities=11% Similarity=-0.006 Sum_probs=32.0
Q ss_pred CCEEEEEc-CCCccCHHH--HHHHHHHHHhCCCeEEEEeCCchhhhhh
Q 011724 9 KPHAIAIC-YPLQGHVIP--FVNLALKLASSGFTITFVNTHSIHHQIT 53 (478)
Q Consensus 9 ~~~il~~~-~~~~GH~~p--~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 53 (478)
|+|++|+- .+-+|+... .+.+|..+.+.||+|.++-..+......
T Consensus 5 Mkk~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~DGV~~~~ 52 (136)
T 2hy5_B 5 VKKFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDDGVYQLT 52 (136)
T ss_dssp CCEEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGGGGGGGB
T ss_pred hhEEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhHHHHHHh
Confidence 44576655 334465444 5677999999999999999888776665
No 226
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=31.93 E-value=82 Score=24.84 Aligned_cols=44 Identities=11% Similarity=-0.137 Sum_probs=31.3
Q ss_pred CEEEEEc-CCCcc--CHHHHHHHHHHHHhCCCeE-EEEeCCchhhhhh
Q 011724 10 PHAIAIC-YPLQG--HVIPFVNLALKLASSGFTI-TFVNTHSIHHQIT 53 (478)
Q Consensus 10 ~~il~~~-~~~~G--H~~p~l~La~~L~~rGh~V-t~~~~~~~~~~~~ 53 (478)
||++|+- .+-+| .....+.+|..+.+.||+| .++-..+......
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dGV~~~~ 48 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDGVNNST 48 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGGGGGGB
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechHHHHHh
Confidence 3554443 33333 4567788999999999999 9888877666654
No 227
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=31.76 E-value=47 Score=30.27 Aligned_cols=44 Identities=16% Similarity=0.068 Sum_probs=33.9
Q ss_pred CCCEEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEeCCchhhh
Q 011724 8 PKPHAIAICYP---LQGHVIPFVNLALKLASSGFTITFVNTHSIHHQ 51 (478)
Q Consensus 8 ~~~~il~~~~~---~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~ 51 (478)
+.||.+|++.+ +.|-=.-.-.|+..|+.||++||..=-+.+...
T Consensus 21 ~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlNv 67 (295)
T 2vo1_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINI 67 (295)
T ss_dssp CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSCC
T ss_pred ccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccceec
Confidence 45899999966 345556677899999999999999876665443
No 228
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=31.61 E-value=1.3e+02 Score=27.78 Aligned_cols=33 Identities=18% Similarity=0.188 Sum_probs=21.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|||+|+..+.. .....+.|.++||+|..+.+..
T Consensus 1 mrivf~gt~~f-----a~~~L~~L~~~~~~i~~Vvt~~ 33 (305)
T 2bln_A 1 MKTVVFAYHDM-----GCLGIEALLAAGYEISAIFTHT 33 (305)
T ss_dssp CEEEEEECHHH-----HHHHHHHHHHTTCEEEEEECCC
T ss_pred CEEEEEEcCHH-----HHHHHHHHHHCCCcEEEEEcCC
Confidence 68888864322 2344566777899998887753
No 229
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=31.50 E-value=93 Score=28.68 Aligned_cols=81 Identities=11% Similarity=0.026 Sum_probs=47.5
Q ss_pred eEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChHhhhhccCcc
Q 011724 286 VLYVSFGSYAHASKNDIVEIALGLLLSEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQIDVISHSAIG 365 (478)
Q Consensus 286 ~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~~vL~~~~v~ 365 (478)
.|+++--+......+....+...|++.+..+.+..... ..-...+..+ +....++
T Consensus 12 ~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~-------~~~a~~~~~~-----------------~~~~~d~- 66 (304)
T 3s40_A 12 LLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKE-------QGDATKYCQE-----------------FASKVDL- 66 (304)
T ss_dssp EEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCS-------TTHHHHHHHH-----------------HTTTCSE-
T ss_pred EEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccC-------cchHHHHHHH-----------------hhcCCCE-
Confidence 34444433333234456677788888787776654422 0000111111 1123455
Q ss_pred eeeeccCchhhHHHHh------cCcceeccCcc
Q 011724 366 GFLTHCGWNSIQESIW------CSVPLLCFPLL 392 (478)
Q Consensus 366 ~~ItHGG~~s~~Eal~------~GvP~l~~P~~ 392 (478)
+|.-||-||+.|++. .++|+.++|..
T Consensus 67 -vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 67 -IIVFGGDGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp -EEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred -EEEEccchHHHHHHHHHhhCCCCCcEEEecCC
Confidence 999999999999864 57899999973
No 230
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=31.49 E-value=42 Score=30.61 Aligned_cols=38 Identities=18% Similarity=0.083 Sum_probs=31.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
|+.|+|..-+|-|-..-...||..|+++|++|.++=.+
T Consensus 2 MkvIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 2 MRQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ceEEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 44566666778899999999999999999999988554
No 231
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=31.22 E-value=31 Score=27.63 Aligned_cols=35 Identities=26% Similarity=0.317 Sum_probs=27.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCch
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSI 48 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 48 (478)
+.||+++-++..| ..+|+.|.++||+|+++.....
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCHH
Confidence 3788888765545 4789999999999999987653
No 232
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=31.05 E-value=48 Score=29.18 Aligned_cols=41 Identities=15% Similarity=0.115 Sum_probs=23.7
Q ss_pred CCCCCCEEEEEc-CCCc----cCHHH-HH-HHHHHHHhCCCeEEEEeC
Q 011724 5 HKKPKPHAIAIC-YPLQ----GHVIP-FV-NLALKLASSGFTITFVNT 45 (478)
Q Consensus 5 ~~~~~~~il~~~-~~~~----GH~~p-~l-~La~~L~~rGh~Vt~~~~ 45 (478)
.+++||||+++. .|-. |-++- ++ .+++.|.+.||+|.++--
T Consensus 21 ~~~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL 68 (218)
T 3rpe_A 21 QSNAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTV 68 (218)
T ss_dssp ---CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEG
T ss_pred ccccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEEC
Confidence 457788998776 4432 22343 22 355666678999987653
No 233
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=31.04 E-value=34 Score=31.31 Aligned_cols=32 Identities=19% Similarity=0.234 Sum_probs=24.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVN 44 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 44 (478)
+||||+|+-.+..|. .+|+.|.+.||+|+++.
T Consensus 2 ~~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp --CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 358999987666664 46888999999998765
No 234
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=30.94 E-value=47 Score=29.66 Aligned_cols=38 Identities=24% Similarity=0.292 Sum_probs=30.1
Q ss_pred CEEEEE-c-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 10 PHAIAI-C-YPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 10 ~~il~~-~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
+|++.+ . -++-|-..=...||..|+++|++|.++=.+.
T Consensus 2 ~~~I~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (263)
T 1hyq_A 2 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI 41 (263)
T ss_dssp CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 454443 3 5677999999999999999999999987654
No 235
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=30.94 E-value=1.3e+02 Score=24.23 Aligned_cols=100 Identities=8% Similarity=-0.030 Sum_probs=63.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCchhhhhhhhcC-CCCCcchhccccCCCCCeEEEEcCCCC
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASS--GFTITFVNTHSIHHQITKAQS-NGDEDDIFAGARKAGLDIRYATVSDGL 84 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~ 84 (478)
+||+|++.. ...+=.-++.+|+.|.+. ||++ +.+..-...++ + . |+....+..+.
T Consensus 2 ~~~~ialsv--~D~dK~~~v~~a~~~~~ll~Gf~l--~AT~gTa~~L~---e~~---------------Gl~v~~v~k~~ 59 (134)
T 2xw6_A 2 HMRALALIA--HDAKKEEMVAFCQRHREVLARFPL--VATGTTGRRIE---EAT---------------GLTVEKLLSGP 59 (134)
T ss_dssp CSCEEEEEE--CGGGHHHHHHHHHHTHHHHTTSCE--EECHHHHHHHH---HHH---------------CCCCEECSCGG
T ss_pred CccEEEEEE--ecccHHHHHHHHHHHHHHhCCCEE--EEccHHHHHHH---Hhh---------------CceEEEEEecC
Confidence 578888875 344556789999999998 9964 56666666666 4 4 55555443210
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCC--c--------hhhHHHHHHcCCccEEEecc
Q 011724 85 PLNFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTF--F--------VWSSMIAKKYNLVNISFWTE 152 (478)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~--~--------~~~~~~A~~lgiP~v~~~~~ 152 (478)
- + .++++.++++. .+.|+||...- . ..-.-+|-.++||+++-..+
T Consensus 60 ~-------e-----------G~p~I~d~I~~-----geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~lat 114 (134)
T 2xw6_A 60 L-------G-----------GDQQMGARVAE-----GRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLATNPMA 114 (134)
T ss_dssp G-------T-----------HHHHHHHHHHT-----TCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEECSHHH
T ss_pred C-------C-----------CcchHHHHHHC-----CCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEcCHHH
Confidence 0 0 12234445554 67999998553 1 22457788899999875433
No 236
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=30.89 E-value=28 Score=27.49 Aligned_cols=33 Identities=15% Similarity=0.142 Sum_probs=24.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
++||+++-.+..| ..+++.|.+.|++|+++...
T Consensus 6 ~~~v~I~G~G~iG-----~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFG-----GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHH-----HHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 4578887653334 45789999999999988764
No 237
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=30.72 E-value=2.5e+02 Score=24.31 Aligned_cols=110 Identities=9% Similarity=0.033 Sum_probs=0.0
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEeC-CchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCC
Q 011724 6 KKPKPHAIAICYPLQGHVIPFVNLALKLASSG--FTITFVNT-HSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSD 82 (478)
Q Consensus 6 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 82 (478)
++.++||+++..+..+- +.+|.+++.+.+ ++|..+.+ .......+.+.+. +|.+..++.
T Consensus 4 ~m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~---------------gIp~~~~~~ 65 (209)
T 4ds3_A 4 SMKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAA---------------GIATQVFKR 65 (209)
T ss_dssp --CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHT---------------TCCEEECCG
T ss_pred cCCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHc---------------CCCEEEeCc
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCc-hhhHHHHHHcCCccEEEecc
Q 011724 83 GLPLNFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFF-VWSSMIAKKYNLVNISFWTE 152 (478)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~-~~~~~~A~~lgiP~v~~~~~ 152 (478)
..-.. .......+.+.++... ||++|+-.+. .-...+-....-.++-+.++
T Consensus 66 ~~~~~--------------r~~~d~~~~~~l~~~~-----~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 66 KDFAS--------------KEAHEDAILAALDVLK-----PDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp GGSSS--------------HHHHHHHHHHHHHHHC-----CSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred cccCC--------------HHHHHHHHHHHHHhcC-----CCEEEEeccccCcCHHHHhhccCCeEEECCc
No 238
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=30.72 E-value=90 Score=27.67 Aligned_cols=39 Identities=15% Similarity=0.280 Sum_probs=28.9
Q ss_pred CCEEEEEcCCC----------cc-CHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 9 KPHAIAICYPL----------QG-HVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 9 ~~~il~~~~~~----------~G-H~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|+||+++.... .| ...=+......|.+.|++|+++++..
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 46898887531 12 44567777888999999999999765
No 239
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=30.38 E-value=23 Score=35.30 Aligned_cols=32 Identities=19% Similarity=0.380 Sum_probs=24.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNT 45 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 45 (478)
|+||+++-.+--| |.-|..|+++|++|+++=.
T Consensus 1 Mk~VvVIGaG~~G-----L~aA~~La~~G~~V~VlEa 32 (501)
T 4dgk_A 1 MKPTTVIGAGFGG-----LALAIRLQAAGIPVLLLEQ 32 (501)
T ss_dssp CCCEEEECCHHHH-----HHHHHHHHHTTCCEEEECC
T ss_pred CCCEEEECCcHHH-----HHHHHHHHHCCCcEEEEcc
Confidence 6788888655434 6668899999999999854
No 240
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=30.28 E-value=3e+02 Score=24.58 Aligned_cols=30 Identities=10% Similarity=0.148 Sum_probs=25.0
Q ss_pred CccEEEEcCCch------hhHHHHHHcCCccEEEec
Q 011724 122 EMNCLVTDTFFV------WSSMIAKKYNLVNISFWT 151 (478)
Q Consensus 122 ~pD~vi~D~~~~------~~~~~A~~lgiP~v~~~~ 151 (478)
+||+||+..-.. .+..+|..||+|.++...
T Consensus 113 ~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 113 GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 499999987553 678999999999999864
No 241
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=30.16 E-value=72 Score=27.98 Aligned_cols=48 Identities=17% Similarity=0.206 Sum_probs=31.9
Q ss_pred CCCCCCEEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEeCC-chhhhh
Q 011724 5 HKKPKPHAIAICYPLQGH----VIPFVNLALKLASSGFTITFVNTH-SIHHQI 52 (478)
Q Consensus 5 ~~~~~~~il~~~~~~~GH----~~p~l~La~~L~~rGh~Vt~~~~~-~~~~~~ 52 (478)
..++|.+|.+++....+- ..-...|++.|+++|+.|+.-... .....+
T Consensus 9 ~~~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg~~GiM~aa 61 (215)
T 2a33_A 9 QKSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLV 61 (215)
T ss_dssp CCCSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHH
T ss_pred ccCCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCChhhHhHHH
Confidence 345566799996444432 234667899999999999877765 444333
No 242
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=29.90 E-value=28 Score=32.12 Aligned_cols=33 Identities=12% Similarity=-0.008 Sum_probs=26.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
+|||.|+-.+..|. .+|+.|+++||+|+++...
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECSS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 47999997776663 6899999999999988654
No 243
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=29.68 E-value=54 Score=28.01 Aligned_cols=34 Identities=12% Similarity=0.073 Sum_probs=24.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|||++. ++.|.+- ..|+++|.++||+|+.++-..
T Consensus 1 MkvlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGII--GATGRAG--SRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEE--cCCchhH--HHHHHHHHhCCCEEEEEEcCc
Confidence 576655 3444443 478999999999999998754
No 244
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=29.66 E-value=46 Score=30.40 Aligned_cols=34 Identities=18% Similarity=0.266 Sum_probs=26.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
+++||+|+-.+..| ..+|..|+++||+|+++-..
T Consensus 3 ~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 3 GITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp SCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 35799999655545 46899999999999987554
No 245
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=29.63 E-value=33 Score=32.16 Aligned_cols=24 Identities=13% Similarity=0.160 Sum_probs=20.4
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCch
Q 011724 25 PFVNLALKLASSGFTITFVNTHSI 48 (478)
Q Consensus 25 p~l~La~~L~~rGh~Vt~~~~~~~ 48 (478)
.-.+||+++.++|++|||++.+..
T Consensus 67 mG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 67 RGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHHHCCCEEEEEecCCC
Confidence 456789999999999999998653
No 246
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=29.61 E-value=39 Score=31.71 Aligned_cols=34 Identities=12% Similarity=0.029 Sum_probs=28.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
..|||.|+-.+..| ..+|..|++.||+|+++...
T Consensus 13 ~~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 34999999877776 57899999999999998764
No 247
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=29.53 E-value=54 Score=30.64 Aligned_cols=38 Identities=21% Similarity=0.085 Sum_probs=32.8
Q ss_pred CEEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 10 PHAIAIC-YPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 10 ~~il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
++|+|+. -+|-|-..-..+||..|+++|++|.++..+.
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 5666655 5677999999999999999999999999876
No 248
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=29.30 E-value=55 Score=28.11 Aligned_cols=34 Identities=9% Similarity=0.067 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|||++. ++.|.+- ..|+++|.++||+|+.++-..
T Consensus 1 MkilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 1 MKIAVL--GATGRAG--SAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEE--cCCCHHH--HHHHHHHHHCCCEEEEEEecc
Confidence 566555 3444443 578899999999999998654
No 249
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=29.03 E-value=72 Score=30.27 Aligned_cols=38 Identities=11% Similarity=0.102 Sum_probs=26.1
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 6 KKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 6 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
+.+||+|++.- +.|-+- ..|++.|.++||+|+.+.-..
T Consensus 26 ~~~~~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~~ 63 (379)
T 2c5a_A 26 PSENLKISITG--AGGFIA--SHIARRLKHEGHYVIASDWKK 63 (379)
T ss_dssp TTSCCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESSC
T ss_pred cccCCeEEEEC--CccHHH--HHHHHHHHHCCCeEEEEECCC
Confidence 34567877664 344332 457889999999999887543
No 250
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=28.93 E-value=73 Score=24.11 Aligned_cols=33 Identities=12% Similarity=0.018 Sum_probs=22.5
Q ss_pred CCccEEEEcCCch--hhHHHHHHc-------CCccEEEecch
Q 011724 121 PEMNCLVTDTFFV--WSSMIAKKY-------NLVNISFWTEP 153 (478)
Q Consensus 121 ~~pD~vi~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 153 (478)
.+||+||.|...+ .+..+.+.+ ++|.+.++...
T Consensus 45 ~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 45 FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 5699999997653 355555543 58888887543
No 251
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=28.81 E-value=42 Score=31.38 Aligned_cols=34 Identities=9% Similarity=-0.014 Sum_probs=28.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCC
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSG-FTITFVNTH 46 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~~ 46 (478)
.+|||.|+-.+..| .++|..|++.| |+|+++...
T Consensus 23 M~m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 23 MMTTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp SCCEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECGG
T ss_pred cCCeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeCC
Confidence 35899999877666 67899999999 999988654
No 252
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=28.75 E-value=73 Score=28.16 Aligned_cols=36 Identities=14% Similarity=-0.015 Sum_probs=25.1
Q ss_pred HHHHhhccCCCccEEEEcCCchh-------hHHHHHHcCCccEEEe
Q 011724 112 LVGNLIQLNPEMNCLVTDTFFVW-------SSMIAKKYNLVNISFW 150 (478)
Q Consensus 112 ll~~l~~~~~~pD~vi~D~~~~~-------~~~~A~~lgiP~v~~~ 150 (478)
+++.+. .+||+|++|..... |..+.-.+++|+|.+.
T Consensus 96 al~~L~---~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 96 AWEKLR---TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVA 138 (225)
T ss_dssp HHTTCC---SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred HHHhcC---CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEE
Confidence 345554 57999999987643 3344555689999985
No 253
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=28.64 E-value=23 Score=30.95 Aligned_cols=33 Identities=18% Similarity=0.161 Sum_probs=24.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|||+++-. |.+ -..+|+.|.++||+|+++....
T Consensus 1 M~iiIiG~---G~~--G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGG---ETT--AYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECC---HHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECC---CHH--HHHHHHHHHhCCCeEEEEECCH
Confidence 57777754 332 3478999999999999998654
No 254
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=28.49 E-value=2.7e+02 Score=24.16 Aligned_cols=45 Identities=11% Similarity=0.021 Sum_probs=28.8
Q ss_pred eEEeeccCh-HhhhhccCcceeeeccCchhhHHHHh---------cCcceeccCc
Q 011724 347 GLIVPWCSQ-IDVISHSAIGGFLTHCGWNSIQESIW---------CSVPLLCFPL 391 (478)
Q Consensus 347 v~v~~~ipq-~~vL~~~~v~~~ItHGG~~s~~Eal~---------~GvP~l~~P~ 391 (478)
..+....++ ..++..-+-..++--||.||+-|..- +++|++++-.
T Consensus 93 ~~~~~~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 93 VRAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EEEESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred eeecCCHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 345555564 33443333345667899999988762 4899998875
No 255
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=28.47 E-value=96 Score=26.70 Aligned_cols=39 Identities=13% Similarity=0.097 Sum_probs=29.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
.|+||+|+.+++.- ..-+....+.|.+.|++|++++...
T Consensus 8 m~~~v~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~g 46 (208)
T 3ot1_A 8 MSKRILVPVAHGSE-EMETVIIVDTLVRAGFQVTMAAVGD 46 (208)
T ss_dssp -CCEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cCCeEEEEECCCCc-HHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 34689998877654 4555666788888999999999863
No 256
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=28.40 E-value=40 Score=30.03 Aligned_cols=22 Identities=18% Similarity=0.301 Sum_probs=19.3
Q ss_pred HHHHHHHHHhCCCeEEEEeCCc
Q 011724 26 FVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 26 ~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
-.+||++|+++|++|++++.+.
T Consensus 32 G~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 32 GKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHCCCEEEEEeCCc
Confidence 4568999999999999999875
No 257
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=28.38 E-value=39 Score=26.67 Aligned_cols=30 Identities=17% Similarity=-0.043 Sum_probs=20.9
Q ss_pred CCccEEEEcCCch--hhHHHHHH---cCCccEEEe
Q 011724 121 PEMNCLVTDTFFV--WSSMIAKK---YNLVNISFW 150 (478)
Q Consensus 121 ~~pD~vi~D~~~~--~~~~~A~~---lgiP~v~~~ 150 (478)
.+||+||.|...+ .+..+++. .++|+|.++
T Consensus 52 ~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 52 GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 5799999998663 34555444 478987664
No 258
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=28.30 E-value=58 Score=29.93 Aligned_cols=34 Identities=6% Similarity=-0.017 Sum_probs=24.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
++|++. ++.|.+- ..|+++|.++||+|+.++-..
T Consensus 12 ~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 12 SKILIF--GGTGYIG--NHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CCEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECTT
T ss_pred CeEEEE--CCCchHH--HHHHHHHHHCCCcEEEEECCC
Confidence 366655 4445443 467899999999999988654
No 259
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=28.19 E-value=59 Score=32.45 Aligned_cols=37 Identities=16% Similarity=0.146 Sum_probs=30.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-CC-eEEEEeCCch
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLASS-GF-TITFVNTHSI 48 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh-~Vt~~~~~~~ 48 (478)
.++|||.++-.+..| +++|..|++. || +|+++-....
T Consensus 16 ~~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 16 GPIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CSCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECChh
Confidence 456899999888777 5789999999 99 9999876543
No 260
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=28.07 E-value=18 Score=36.03 Aligned_cols=33 Identities=24% Similarity=0.210 Sum_probs=27.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|||+++-.+-.|. .||+.|.+.||+|+++=...
T Consensus 4 M~iiI~G~G~vG~-----~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 4 MKIIILGAGQVGG-----TLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEEECCSHHHH-----HHHHHTCSTTEEEEEEESCH
T ss_pred CEEEEECCCHHHH-----HHHHHHHHCCCCEEEEECCH
Confidence 9999988776663 58999999999999997654
No 261
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=28.02 E-value=2.5e+02 Score=24.95 Aligned_cols=37 Identities=16% Similarity=-0.035 Sum_probs=24.7
Q ss_pred CEEEEEcCCCccCH-HHHHHHHHHHHhCCCeEEEEeCC
Q 011724 10 PHAIAICYPLQGHV-IPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 10 ~~il~~~~~~~GH~-~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
|||+++-.-+.-++ ..+...++.++..|.+|.+++.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 68877776665555 45566777776667777776654
No 262
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=27.93 E-value=41 Score=29.26 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=24.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
++|||+|+-.+..| ..+|+.|.+.||+|+++...
T Consensus 27 ~~~~I~iiG~G~~G-----~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 27 EAPKVGILGSGDFA-----RSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp --CCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEEccCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 56899998644444 35788899999999987654
No 263
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=27.91 E-value=57 Score=27.57 Aligned_cols=42 Identities=10% Similarity=0.028 Sum_probs=26.3
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 5 HKKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 5 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|.+.+.+|+++...+.=.. =+..-.+.|.+.|++|++++...
T Consensus 4 m~~t~~~v~il~~~gFe~~-E~~~p~~~l~~ag~~V~~~s~~~ 45 (177)
T 4hcj_A 4 MGKTNNILYVMSGQNFQDE-EYFESKKIFESAGYKTKVSSTFI 45 (177)
T ss_dssp -CCCCEEEEECCSEEECHH-HHHHHHHHHHHTTCEEEEEESSS
T ss_pred cccCCCEEEEECCCCccHH-HHHHHHHHHHHCCCEEEEEECCC
Confidence 3343444455554444333 35566788889999999999765
No 264
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=27.89 E-value=55 Score=29.88 Aligned_cols=35 Identities=11% Similarity=0.036 Sum_probs=25.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
||+|++. ++.|.+- ..|++.|.++||+|+.++-..
T Consensus 4 ~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 4 KSRVLIV--GGTGYIG--KRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp CCCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCSC
T ss_pred CCEEEEE--cCCcHHH--HHHHHHHHhCCCcEEEEECCC
Confidence 4677766 4445443 457889999999999988653
No 265
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=27.87 E-value=54 Score=30.16 Aligned_cols=36 Identities=8% Similarity=-0.166 Sum_probs=25.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
+||+|++. ++.|.+- ..|+++|.++||+|+.++-..
T Consensus 3 ~~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 3 HMEKIIIY--GGTGYIG--KFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp -CCCEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECCC
T ss_pred cccEEEEE--cCCchhH--HHHHHHHHhCCCcEEEEECCc
Confidence 35677665 4455553 357899999999999988754
No 266
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=27.83 E-value=34 Score=31.78 Aligned_cols=37 Identities=19% Similarity=0.159 Sum_probs=25.9
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCC--eEEEEeCCc
Q 011724 6 KKPKPHAIAICYPLQGHVIPFVNLALKLASSGF--TITFVNTHS 47 (478)
Q Consensus 6 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh--~Vt~~~~~~ 47 (478)
.+++|||+++-.+..|- . +|..|++.|| +|+++....
T Consensus 4 ~~~~mkI~IiGaG~vG~---~--~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 4 TVKPTKLAVIGAGAVGS---T--LAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp ---CCEEEEECCSHHHH---H--HHHHHHHTTCCSEEEEECSSH
T ss_pred CCCCCEEEEECCCHHHH---H--HHHHHHhCCCCCEEEEEeCCh
Confidence 35668999986544443 2 6778899999 999997764
No 267
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=27.67 E-value=30 Score=31.88 Aligned_cols=56 Identities=4% Similarity=0.135 Sum_probs=39.9
Q ss_pred hhhccCcceeeeccCchhhHHHHh----cCcceeccCcccchhHHHHHhhcccCHHHHHHHHHHHhCC
Q 011724 358 VISHSAIGGFLTHCGWNSIQESIW----CSVPLLCFPLLTDQFTNRKLVKSSITKEEVSEKINRLMSG 421 (478)
Q Consensus 358 vL~~~~v~~~ItHGG~~s~~Eal~----~GvP~l~~P~~~DQ~~na~rv~~~~t~~~l~~~v~~ll~~ 421 (478)
+-..+++ +|+=||-||+.+++. .++|++.++... ..-+. .+.++++.++++++++|
T Consensus 60 ~~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~Gt-----~gfla-~~~~~~~~~al~~i~~g 119 (292)
T 2an1_A 60 IGQQADL--AVVVGGDGNMLGAARTLARYDINVIGINRGN-----LGFLT-DLDPDNALQQLSDVLEG 119 (292)
T ss_dssp HHHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCSSS-----CCSSC-CBCTTSHHHHHHHHHTT
T ss_pred cccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEECCC-----cccCC-cCCHHHHHHHHHHHHcC
Confidence 3445677 999999999999974 378999998431 01111 24567888999999874
No 268
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=27.49 E-value=54 Score=30.50 Aligned_cols=37 Identities=3% Similarity=0.049 Sum_probs=28.9
Q ss_pred CCEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEeC
Q 011724 9 KPHAIAICYPLQGHVIP-FVNLALKLASSGFTITFVNT 45 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~~ 45 (478)
|+||+++..+..++... ...+.+.|.++|++|.+..+
T Consensus 4 m~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~ 41 (307)
T 1u0t_A 4 HRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSA 41 (307)
T ss_dssp -CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecc
Confidence 57999999998877654 56689999999999887544
No 269
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=27.44 E-value=90 Score=29.26 Aligned_cols=81 Identities=9% Similarity=-0.033 Sum_probs=46.8
Q ss_pred EEEEecccccCCHHHHHHHHHHHhhCCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChHhhhhccCcce
Q 011724 287 LYVSFGSYAHASKNDIVEIALGLLLSEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQIDVISHSAIGG 366 (478)
Q Consensus 287 Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~~vL~~~~v~~ 366 (478)
|++.-.+...........+...|++.+..+.+..... +....+ . -........++
T Consensus 29 vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~----------~~~a~~------------~-~~~~~~~~~d~-- 83 (337)
T 2qv7_A 29 IIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEK----------IGDATL------------E-AERAMHENYDV-- 83 (337)
T ss_dssp EEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCS----------TTHHHH------------H-HHHHTTTTCSE--
T ss_pred EEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecC----------cchHHH------------H-HHHHhhcCCCE--
Confidence 4444433322223456778888888877765554322 001100 0 01112233455
Q ss_pred eeeccCchhhHHHHh------cCcceeccCcc
Q 011724 367 FLTHCGWNSIQESIW------CSVPLLCFPLL 392 (478)
Q Consensus 367 ~ItHGG~~s~~Eal~------~GvP~l~~P~~ 392 (478)
+|.=||-||+.|++. .++|+.++|..
T Consensus 84 vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~G 115 (337)
T 2qv7_A 84 LIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMG 115 (337)
T ss_dssp EEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred EEEEcCchHHHHHHHHHHhCCCCCcEEEecCC
Confidence 999999999999853 46899999974
No 270
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=27.41 E-value=58 Score=29.16 Aligned_cols=41 Identities=17% Similarity=0.127 Sum_probs=31.6
Q ss_pred CCEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCchh
Q 011724 9 KPHAIAIC--YPLQGHVIPFVNLALKLASSGFTITFVNTHSIH 49 (478)
Q Consensus 9 ~~~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 49 (478)
|++++.+. -++-|=..-...||..|+++|++|.++=.+...
T Consensus 17 ~~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 17 IKSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp CSCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 45554443 556799999999999999999999998765443
No 271
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=27.34 E-value=1.2e+02 Score=25.55 Aligned_cols=40 Identities=20% Similarity=0.224 Sum_probs=29.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
++++||+++-.++.. ..-+....+.|.+.|++|++++...
T Consensus 3 ~m~kkv~ill~~g~~-~~e~~~~~~~l~~ag~~v~~~s~~~ 42 (190)
T 4e08_A 3 HMSKSALVILAPGAE-EMEFIIAADVLRRAGIKVTVAGLNG 42 (190)
T ss_dssp -CCCEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCcEEEEEECCCch-HHHHHHHHHHHHHCCCEEEEEECCC
Confidence 344789888876653 4445566788889999999999865
No 272
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=27.04 E-value=2.2e+02 Score=28.53 Aligned_cols=33 Identities=15% Similarity=-0.032 Sum_probs=22.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
+|++++. .-.-.++|++.|.+-|.+|..+.+..
T Consensus 361 krv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~~ 393 (519)
T 1qgu_B 361 KKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSHN 393 (519)
T ss_dssp CEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeCC
Confidence 5777763 33445677888888898888666544
No 273
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=26.97 E-value=59 Score=29.97 Aligned_cols=34 Identities=15% Similarity=0.164 Sum_probs=23.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
||+|++.- +.|-+- ..|++.|.++||+|+.+...
T Consensus 1 M~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 34 (330)
T 2c20_A 1 MNSILICG--GAGYIG--SHAVKKLVDEGLSVVVVDNL 34 (330)
T ss_dssp -CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEEC--CCcHHH--HHHHHHHHhCCCEEEEEeCC
Confidence 56777663 333332 56889999999999988643
No 274
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=26.95 E-value=66 Score=28.64 Aligned_cols=36 Identities=19% Similarity=0.070 Sum_probs=25.5
Q ss_pred HHHHhhccCCCccEEEEcCCchh-------hHHHHHHcCCccEEEe
Q 011724 112 LVGNLIQLNPEMNCLVTDTFFVW-------SSMIAKKYNLVNISFW 150 (478)
Q Consensus 112 ll~~l~~~~~~pD~vi~D~~~~~-------~~~~A~~lgiP~v~~~ 150 (478)
++++++ .+||+|++|..... |.-+.-.+++|+|.+.
T Consensus 100 al~~L~---~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 100 ALDALP---CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp HHHTSS---SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEE
T ss_pred HHHhcC---CCCCEEEEeCceeecCCCcchhheeeeecCCCEEeee
Confidence 445555 57999999986632 3455566789999985
No 275
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=26.94 E-value=90 Score=26.13 Aligned_cols=41 Identities=12% Similarity=0.161 Sum_probs=31.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
++|..|.+....+.|-..=+..|++.|.++|++|..+....
T Consensus 2 ~~~~~i~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~ 42 (169)
T 1xjc_A 2 NAMNVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHG 42 (169)
T ss_dssp --CCEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHhhHhcCCeeeEEEeCC
Confidence 34455666667788998889999999999999998888654
No 276
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=26.71 E-value=20 Score=33.09 Aligned_cols=33 Identities=21% Similarity=0.151 Sum_probs=27.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
+|||+|+-.++.|- .+|..|++.||+|+++...
T Consensus 2 ~mkI~iiGaGa~G~-----~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGPGAVGT-----TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp -CCEEEECCSHHHH-----HHHHHHHHHCTTCEEEESS
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEec
Confidence 38999998887774 5788899999999999865
No 277
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=26.54 E-value=1.4e+02 Score=27.82 Aligned_cols=81 Identities=16% Similarity=-0.000 Sum_probs=0.0
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChHhhhhcc
Q 011724 283 RGSVLYVSFGSYAHASKNDIVEIALGLLLSEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQIDVISHS 362 (478)
Q Consensus 283 ~~~~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~~vL~~~ 362 (478)
++-.|+++-.+... +....+...|++.+..+.+..... .+-... +-...+...+
T Consensus 30 ~~~~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~-----------~~~~~~------------~~~~~~~~~~ 83 (332)
T 2bon_A 30 PASLLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWE-----------KGDAAR------------YVEEARKFGV 83 (332)
T ss_dssp CCEEEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCS-----------TTHHHH------------HHHHHHHHTC
T ss_pred ceEEEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecC-----------cchHHH------------HHHHHHhcCC
Q ss_pred CcceeeeccCchhhHHHH--------hcCcceeccCc
Q 011724 363 AIGGFLTHCGWNSIQESI--------WCSVPLLCFPL 391 (478)
Q Consensus 363 ~v~~~ItHGG~~s~~Eal--------~~GvP~l~~P~ 391 (478)
++ +|.-||-||+.|++ ..++|+.++|.
T Consensus 84 d~--vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~ 118 (332)
T 2bon_A 84 AT--VIAGGGDGTINEVSTALIQCEGDDIPALGILPL 118 (332)
T ss_dssp SE--EEEEESHHHHHHHHHHHHHCCSSCCCEEEEEEC
T ss_pred CE--EEEEccchHHHHHHHHHhhcccCCCCeEEEecC
No 278
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=26.35 E-value=82 Score=28.61 Aligned_cols=39 Identities=8% Similarity=-0.006 Sum_probs=28.3
Q ss_pred CCEEEEEcCCCc-cCHH---HHHHHHHHHHhCCCeEEEEeCCc
Q 011724 9 KPHAIAICYPLQ-GHVI---PFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 9 ~~~il~~~~~~~-GH~~---p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
+|||+++..+.. -|-. ....++++|.++||+|.++....
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~~ 44 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE 44 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecCc
Confidence 378999875432 2333 34579999999999999988763
No 279
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=26.16 E-value=59 Score=25.05 Aligned_cols=38 Identities=3% Similarity=-0.053 Sum_probs=23.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVN 44 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 44 (478)
.++|||+++|..|.|--.-...+=+...++|.+|.+..
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 56799999998776433333334444445688877754
No 280
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=26.11 E-value=46 Score=26.88 Aligned_cols=36 Identities=14% Similarity=0.058 Sum_probs=29.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
..++++++.+. =+.|++++++.|.++|.+|+++ ...
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R 53 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVT 53 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEE
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 36788877443 3899999999999999999999 544
No 281
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=25.99 E-value=65 Score=30.74 Aligned_cols=37 Identities=8% Similarity=0.081 Sum_probs=27.9
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 6 KKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 6 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
++++|||+++..+ . ....+++++++.|++|..+....
T Consensus 8 ~~~~~~ili~g~g---~--~~~~~~~a~~~~G~~v~~~~~~~ 44 (391)
T 1kjq_A 8 RPAATRVMLLGSG---E--LGKEVAIECQRLGVEVIAVDRYA 44 (391)
T ss_dssp STTCCEEEEESCS---H--HHHHHHHHHHTTTCEEEEEESST
T ss_pred CCCCCEEEEECCC---H--HHHHHHHHHHHcCCEEEEEECCC
Confidence 4566899999543 1 34678999999999998887654
No 282
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=25.96 E-value=63 Score=29.85 Aligned_cols=39 Identities=18% Similarity=0.183 Sum_probs=24.9
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 5 HKKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 5 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
+.+++|+|++.- +.|-+- ..|++.|.++||+|+.+.-..
T Consensus 10 ~~~~~~~vlVTG--atG~iG--~~l~~~L~~~g~~V~~~~r~~ 48 (335)
T 1rpn_A 10 HGSMTRSALVTG--ITGQDG--AYLAKLLLEKGYRVHGLVARR 48 (335)
T ss_dssp -----CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEECCC
T ss_pred ccccCCeEEEEC--CCChHH--HHHHHHHHHCCCeEEEEeCCC
Confidence 445668887664 444442 468899999999999987643
No 283
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=25.93 E-value=50 Score=31.53 Aligned_cols=34 Identities=12% Similarity=0.125 Sum_probs=26.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
++|||.|+-.+..| ..+|+.|++.||+|+++...
T Consensus 21 ~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 21 QSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 34899999765544 47889999999999988654
No 284
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=25.90 E-value=46 Score=30.16 Aligned_cols=41 Identities=17% Similarity=0.130 Sum_probs=31.4
Q ss_pred CCEEEEEcCCC---ccCHHHHHHHHHHHHhCCCeEEEEeCCchh
Q 011724 9 KPHAIAICYPL---QGHVIPFVNLALKLASSGFTITFVNTHSIH 49 (478)
Q Consensus 9 ~~~il~~~~~~---~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 49 (478)
+||.+|++.+. .|-=.-.-.|+..|+.||++||.+=-+.+.
T Consensus 22 ~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPYl 65 (294)
T 2c5m_A 22 SMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYI 65 (294)
T ss_dssp CCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECBC
T ss_pred ceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCce
Confidence 47999998663 355566778999999999999987655543
No 285
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=25.90 E-value=3.6e+02 Score=26.99 Aligned_cols=32 Identities=13% Similarity=-0.068 Sum_probs=21.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
+|++++. .-.-..+|++.|.+-|.+|..+.+.
T Consensus 365 KrvaI~g-----d~~~~~~la~fL~elGm~vv~v~~~ 396 (523)
T 3u7q_B 365 KRFALWG-----DPDFVMGLVKFLLELGCEPVHILCH 396 (523)
T ss_dssp CEEEEEC-----SHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CEEEEEC-----CchHHHHHHHHHHHcCCEEEEEEeC
Confidence 5777762 3344567777888888888877654
No 286
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=25.83 E-value=98 Score=27.14 Aligned_cols=47 Identities=11% Similarity=0.148 Sum_probs=32.2
Q ss_pred CCCCCEEEEEcCCCcc----CHHHHHHHHHHHHhCCCeEEEEeCC-chhhhh
Q 011724 6 KKPKPHAIAICYPLQG----HVIPFVNLALKLASSGFTITFVNTH-SIHHQI 52 (478)
Q Consensus 6 ~~~~~~il~~~~~~~G----H~~p~l~La~~L~~rGh~Vt~~~~~-~~~~~~ 52 (478)
.++|.+|.+++....+ +..-...|++.|+++|+.|..-+.. .....+
T Consensus 6 ~~~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~~GlM~aa 57 (216)
T 1ydh_A 6 RSRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLI 57 (216)
T ss_dssp CCSCSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHH
T ss_pred CCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCcccHhHHH
Confidence 4556679998644333 3456777899999999998777765 544443
No 287
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=25.81 E-value=64 Score=32.16 Aligned_cols=40 Identities=15% Similarity=0.134 Sum_probs=27.4
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeC
Q 011724 1 MENNHKKPKPHAIAICYPLQGHVIPFVNLALKLASS--GFTITFVNT 45 (478)
Q Consensus 1 ~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~ 45 (478)
|...-+++||||.++-.+..| +.+|..|++. ||+|+++-.
T Consensus 1 m~~~~~~~~mkI~VIG~G~vG-----~~~A~~La~~g~g~~V~~~D~ 42 (481)
T 2o3j_A 1 MTDQVFGKVSKVVCVGAGYVG-----GPTCAMIAHKCPHITVTVVDM 42 (481)
T ss_dssp --CCSSCCCCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEECS
T ss_pred CCCCCCCCCCEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEEEC
Confidence 433333456899999766666 4568888887 799998864
No 288
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=25.66 E-value=1.2e+02 Score=25.92 Aligned_cols=39 Identities=18% Similarity=0.078 Sum_probs=30.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCch
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSI 48 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 48 (478)
|+||+|+.+++. ...-+....+.|.+.|++|++++....
T Consensus 2 ~~kV~ill~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~~~ 40 (205)
T 2ab0_A 2 SASALVCLAPGS-EETEAVTTIDLLVRGGIKVTTASVASD 40 (205)
T ss_dssp CCEEEEEECTTC-CHHHHHHHHHHHHHTTCEEEEEECSST
T ss_pred CcEEEEEEcCCC-cHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 368998888766 345566677889899999999997653
No 289
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=25.56 E-value=95 Score=23.82 Aligned_cols=38 Identities=16% Similarity=0.226 Sum_probs=23.3
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEE
Q 011724 1 MENNHKKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITF 42 (478)
Q Consensus 1 ~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~ 42 (478)
|.+..+.++++|+++- .+-.-...|.+.|.+.|++|+.
T Consensus 1 M~~~~~~~~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~ 38 (140)
T 3cg0_A 1 MSLTASDDLPGVLIVE----DGRLAAATLRIQLESLGYDVLG 38 (140)
T ss_dssp -------CCCEEEEEC----CBHHHHHHHHHHHHHHTCEEEE
T ss_pred CCcccCCCCceEEEEE----CCHHHHHHHHHHHHHCCCeeEE
Confidence 6666666779999886 4445556678888888999875
No 290
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=25.43 E-value=58 Score=28.26 Aligned_cols=37 Identities=11% Similarity=0.100 Sum_probs=26.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
...+++..+..|+..-...++..|.++|++|..+--+
T Consensus 12 ~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~~ 48 (267)
T 3sty_A 12 KKHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLG 48 (267)
T ss_dssp CCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CCeEEEECCCCCCcchHHHHHHHHHhcCCeEEEeccc
Confidence 3445555566677777778999999999998877544
No 291
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=25.25 E-value=51 Score=29.41 Aligned_cols=34 Identities=6% Similarity=-0.072 Sum_probs=25.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
+||||+|+-.+..| ..+|+.|.+.||+|+++...
T Consensus 2 ~~m~i~iiG~G~mG-----~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 2 NAMKIGIIGVGKMA-----SAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHTTSSCEEEEECSS
T ss_pred CccEEEEECCCHHH-----HHHHHHHHhCCCeEEEECCC
Confidence 46899998765555 35788899999998877543
No 292
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=25.22 E-value=86 Score=24.32 Aligned_cols=44 Identities=7% Similarity=-0.076 Sum_probs=31.2
Q ss_pred CEEEEEc-CCCccCH--HHHHHHHHHHHhCCCeEEEEeCCchhhhhh
Q 011724 10 PHAIAIC-YPLQGHV--IPFVNLALKLASSGFTITFVNTHSIHHQIT 53 (478)
Q Consensus 10 ~~il~~~-~~~~GH~--~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 53 (478)
+|++++- .+-+|+- .-.+.+|..+...||+|.++-..+....+.
T Consensus 2 kk~~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~DGV~~~~ 48 (119)
T 2d1p_B 2 KRIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGVFQLL 48 (119)
T ss_dssp CCEEEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGGGGGGGC
T ss_pred cEEEEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehHHHHHHh
Confidence 4455544 3344655 566788999988999999998887666664
No 293
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=25.22 E-value=73 Score=28.34 Aligned_cols=36 Identities=14% Similarity=0.105 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
++|.++++..+. -+ -.++|++|+++|++|+++....
T Consensus 6 ~~k~vlVTGas~-gI--G~~~a~~l~~~G~~v~~~~~~~ 41 (264)
T 3i4f_A 6 FVRHALITAGTK-GL--GKQVTEKLLAKGYSVTVTYHSD 41 (264)
T ss_dssp CCCEEEETTTTS-HH--HHHHHHHHHHTTCEEEEEESSC
T ss_pred ccCEEEEeCCCc-hh--HHHHHHHHHHCCCEEEEEcCCC
Confidence 467777774443 22 2578999999999999886543
No 294
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=25.14 E-value=4e+02 Score=24.46 Aligned_cols=16 Identities=13% Similarity=0.100 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHH
Q 011724 425 DELRKNIKEVRKKLEN 440 (478)
Q Consensus 425 ~~~r~~a~~l~~~~~~ 440 (478)
..|++|++++.+++.+
T Consensus 159 ~~Y~~Na~~~~~~L~~ 174 (307)
T 3ujp_A 159 KYYNANAAVYSEQLKA 174 (307)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5699999999998875
No 295
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=25.09 E-value=41 Score=28.96 Aligned_cols=36 Identities=11% Similarity=0.038 Sum_probs=21.0
Q ss_pred CCEEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 011724 9 KPHAIAIC-YPLQGHVIPFVNLALKLASSGFTITFVN 44 (478)
Q Consensus 9 ~~~il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 44 (478)
||||+++. .|-.+.-.-..++++.+.+.|++|+++-
T Consensus 1 MmkiLiI~gsp~~~~s~l~~~l~~~~~~~g~ev~~~d 37 (192)
T 3f2v_A 1 MPKTLIILAHPNISQSTVHKHWSDAVRQHTDRFTVHE 37 (192)
T ss_dssp -CCEEEEECCTTGGGCSHHHHHHHHHTTCTTTEEEEE
T ss_pred CCEEEEEEeCCCccHHHHHHHHHHHHHhCCCeEEEEE
Confidence 57787665 4433321234456677777788777664
No 296
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=24.89 E-value=78 Score=29.02 Aligned_cols=39 Identities=26% Similarity=0.325 Sum_probs=30.0
Q ss_pred CCCCEEEEEcCCCccCHHHH--HHHHHHHHhCC-CeEEEEeCC
Q 011724 7 KPKPHAIAICYPLQGHVIPF--VNLALKLASSG-FTITFVNTH 46 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~--l~La~~L~~rG-h~Vt~~~~~ 46 (478)
+++.|||++. +..+|-.+. -.|++.|.+.| ++|++...+
T Consensus 2 ~~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 4679999995 444886554 46888888888 999999875
No 297
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=24.82 E-value=99 Score=29.10 Aligned_cols=26 Identities=4% Similarity=-0.015 Sum_probs=20.8
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEECCC
Q 011724 298 SKNDIVEIALGLLLSEVSFVWVLRPD 323 (478)
Q Consensus 298 ~~~~~~~~~~al~~~~~~~i~~~~~~ 323 (478)
+.+....+.+++.+...+.||.+.++
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG 88 (331)
T 4e5s_A 63 ISSRVQDLHEAFRDPNVKAILTTLGG 88 (331)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 34556779999999999999988766
No 298
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=24.61 E-value=63 Score=32.06 Aligned_cols=34 Identities=15% Similarity=0.067 Sum_probs=26.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCC
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASS--GFTITFVNTH 46 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~ 46 (478)
+||||.|+-.+..| ..+|..|++. ||+|+++-..
T Consensus 4 ~~mkI~VIG~G~mG-----~~lA~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 4 EIKKICCIGAGYVG-----GPTCSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp CCCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEECSC
T ss_pred CccEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEEECC
Confidence 46899999766555 4678888888 8999988543
No 299
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=24.52 E-value=66 Score=27.62 Aligned_cols=34 Identities=15% Similarity=0.116 Sum_probs=24.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|||++.- +.|-+- ..|+++|.++||+|+.++-..
T Consensus 1 M~ilItG--atG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 1 MKIFIVG--STGRVG--KSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp CEEEEES--TTSHHH--HHHHHHHTTSSCEEEEEESSG
T ss_pred CeEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEECCc
Confidence 4766654 334333 478999999999999988654
No 300
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=24.49 E-value=67 Score=28.72 Aligned_cols=41 Identities=20% Similarity=0.233 Sum_probs=31.3
Q ss_pred CCCCEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCch
Q 011724 7 KPKPHAIAIC--YPLQGHVIPFVNLALKLASSGFTITFVNTHSI 48 (478)
Q Consensus 7 ~~~~~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 48 (478)
++++|++.+. -+|-|-..-...||..|+ +|++|.++=.+..
T Consensus 24 ~~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~~ 66 (267)
T 3k9g_A 24 NKKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMDTQ 66 (267)
T ss_dssp --CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECTT
T ss_pred CCCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECCCC
Confidence 4556776665 456789999999999999 9999999876543
No 301
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=24.46 E-value=79 Score=29.84 Aligned_cols=35 Identities=9% Similarity=-0.158 Sum_probs=26.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCch
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSI 48 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 48 (478)
|+||+++..+ .....+++++++.||+|.++.+...
T Consensus 1 M~~Ililg~g-----~~~~~~~~a~~~~G~~v~~~~~~~~ 35 (365)
T 2z04_A 1 MLTVGILGGG-----QLGWMTILEGRKLGFKFHVLEDKEN 35 (365)
T ss_dssp -CEEEEECCS-----HHHHHHHHHHGGGTCEEEEECSSSS
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 5789888643 3466789999999999999887543
No 302
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=24.44 E-value=79 Score=26.27 Aligned_cols=35 Identities=11% Similarity=-0.044 Sum_probs=21.3
Q ss_pred CCCCEEEEEcC----CCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011724 7 KPKPHAIAICY----PLQGHVIPFVNLALKLASSGFTITFVNT 45 (478)
Q Consensus 7 ~~~~~il~~~~----~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 45 (478)
+.|||+++++. ...||+ .++++.++.+.+|.++.+
T Consensus 2 ~~mm~i~i~~GsFDPiH~GHl----~li~~A~~~~d~viv~v~ 40 (162)
T 4f3r_A 2 NAMKPIAIYPGTFDPLTNGHV----DIIERALPLFNKIIVACA 40 (162)
T ss_dssp ---CCEEEEEECCTTCCHHHH----HHHHHHGGGCSEEEEEEC
T ss_pred CCceEEEEEEEEcCCCCHHHH----HHHHHHHHHCCcEEEEEe
Confidence 56789988883 345775 455666666677776655
No 303
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=24.42 E-value=76 Score=28.55 Aligned_cols=35 Identities=9% Similarity=-0.064 Sum_probs=24.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
+|+++++.++ |-+ -.++|+.|+++|++|+......
T Consensus 5 ~k~vlVTGas-~gI--G~~~a~~l~~~G~~V~~~~r~~ 39 (281)
T 3m1a_A 5 AKVWLVTGAS-SGF--GRAIAEAAVAAGDTVIGTARRT 39 (281)
T ss_dssp CCEEEETTTT-SHH--HHHHHHHHHHTTCEEEEEESSG
T ss_pred CcEEEEECCC-ChH--HHHHHHHHHHCCCEEEEEeCCH
Confidence 5677777443 333 2468999999999998887643
No 304
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=24.40 E-value=46 Score=33.38 Aligned_cols=35 Identities=9% Similarity=0.324 Sum_probs=27.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
++.||+++-.+.-| +.+|+.|.+.|++||++....
T Consensus 41 ~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 45699998755444 567899999999999998754
No 305
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=24.39 E-value=3.4e+02 Score=23.36 Aligned_cols=35 Identities=9% Similarity=0.026 Sum_probs=23.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCc
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASS--GFTITFVNTHS 47 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~ 47 (478)
+||+++..+..+- +.+|.+.+++. +++|..+.+..
T Consensus 1 ~riaVl~SG~Gs~---L~aLi~~~~~~~~~~~I~~Vvs~~ 37 (209)
T 1meo_A 1 ARVAVLISGTGSN---LQALIDSTREPNSSAQIDIVISNK 37 (209)
T ss_dssp CEEEEEESSSCTT---HHHHHHHHHSTTCSCEEEEEEESS
T ss_pred CeEEEEEECCchH---HHHHHHHHhcCCCCcEEEEEEeCC
Confidence 4788887665543 44555666554 79998877654
No 306
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=24.34 E-value=3e+02 Score=23.19 Aligned_cols=115 Identities=17% Similarity=0.172 Sum_probs=64.0
Q ss_pred ccCCHHHHHHHHHHHhhCCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChHhhhhccCcceeeeccCch
Q 011724 295 AHASKNDIVEIALGLLLSEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQIDVISHSAIGGFLTHCGWN 374 (478)
Q Consensus 295 ~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~~vL~~~~v~~~ItHGG~~ 374 (478)
....++.+.++++..++.+.+++++.-+. ..-||.-.... .+--|+=+.- +.. +=.|+.
T Consensus 59 AHRtp~~l~~~~~~a~~~g~~ViIa~AG~------aahLpGvvAa~--T~~PVIGVPv--~s~-----------~l~G~D 117 (181)
T 4b4k_A 59 AHRTPDYMFEYAETARERGLKVIIAGAGG------AAHLPGMVAAK--TNLPVIGVPV--QSK-----------ALNGLD 117 (181)
T ss_dssp TTTSHHHHHHHHHHTTTTTCCEEEEEECS------SCCHHHHHHTT--CCSCEEEEEC--CCT-----------TTTTHH
T ss_pred cccChHHHHHHHHHHHhcCceEEEEeccc------cccchhhHHhc--CCCCEEEEec--CCC-----------Cccchh
Confidence 35678888888888888888888876544 11244322222 1111221110 000 013444
Q ss_pred hhHHHH--hcCcceeccCcccchhHHHHHhhcccCHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHh
Q 011724 375 SIQESI--WCSVPLLCFPLLTDQFTNRKLVKSSITKEEVSEKINRLMSGKSSDELRKNIKEVRKKLENALS 443 (478)
Q Consensus 375 s~~Eal--~~GvP~l~~P~~~DQ~~na~rv~~~~t~~~l~~~v~~ll~~~~~~~~r~~a~~l~~~~~~a~~ 443 (478)
+++..+ -.|+|+..+-....-..||+.+.- ++|.-. |++.+++.+..++.+++.+.
T Consensus 118 sLlSivQMP~GvpVaTvaig~~ga~NAallA~------------qILa~~-d~~l~~kl~~~r~~~~~~v~ 175 (181)
T 4b4k_A 118 SLLSIVQMPGGVPVATVAIGKAGSTNAGLLAA------------QILGSF-HDDIHDALELRREAIEKDVR 175 (181)
T ss_dssp HHHHHHTCCTTCCCEECCSSHHHHHHHHHHHH------------HHHTTT-CHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhCCCCCceEEEecCCccHHHHHHHHH------------HHHccC-CHHHHHHHHHHHHHHHHHHH
Confidence 444333 469999888887777888887433 222111 56777777777666665443
No 307
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=24.23 E-value=1.4e+02 Score=26.16 Aligned_cols=38 Identities=13% Similarity=-0.014 Sum_probs=29.2
Q ss_pred CCEEEEEcC-----CCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 9 KPHAIAICY-----PLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 9 ~~~il~~~~-----~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|+||+|+.. ++. ...=+....+.|.+.|++|++++...
T Consensus 6 m~kv~ill~~~~~~~g~-~~~E~~~p~~~l~~ag~~v~~~s~~g 48 (232)
T 1vhq_A 6 MKKIGVILSGCGVYDGS-EIHEAVLTLLAISRSGAQAVCFAPDK 48 (232)
T ss_dssp CCEEEEECCSBSTTTSB-CHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCeEEEEEccCCCCCCe-eHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 578999887 543 45556667788889999999999765
No 308
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=24.21 E-value=43 Score=33.53 Aligned_cols=35 Identities=23% Similarity=0.388 Sum_probs=27.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
+.||+|.|+-.+..| .+||..|+++||+|+++...
T Consensus 2 ~~~~kIgiIGlG~MG-----~~lA~~L~~~G~~V~v~dr~ 36 (484)
T 4gwg_A 2 NAQADIALIGLAVMG-----QNLILNMNDHGFVVCAFNRT 36 (484)
T ss_dssp -CCBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCCCEEEEEChhHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 356899999876666 46899999999999988643
No 309
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=24.19 E-value=58 Score=29.64 Aligned_cols=35 Identities=6% Similarity=0.050 Sum_probs=24.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|++|++. ++.|.+- ..|+++|.++||+|+.++-..
T Consensus 2 ~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILIL--GPTGAIG--RHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEE--STTSTTH--HHHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEE--CCCchHH--HHHHHHHHhCCCcEEEEECCC
Confidence 4677665 4445443 357888999999999987654
No 310
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=24.10 E-value=73 Score=31.94 Aligned_cols=36 Identities=14% Similarity=0.103 Sum_probs=26.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
+||||++.- +.|-+- ..|++.|.++||+|+.++-..
T Consensus 146 k~m~VLVTG--atG~IG--~~l~~~L~~~G~~V~~l~R~~ 181 (516)
T 3oh8_A 146 SPLTVAITG--SRGLVG--RALTAQLQTGGHEVIQLVRKE 181 (516)
T ss_dssp CCCEEEEES--TTSHHH--HHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEECCC
Confidence 378988764 334333 367899999999999998653
No 311
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=24.09 E-value=1e+02 Score=29.24 Aligned_cols=34 Identities=12% Similarity=0.001 Sum_probs=26.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|+||+++..+ ..-..++++|++.|++|.++.+..
T Consensus 1 M~~Ililg~g-----~~g~~~~~a~~~~G~~v~~~~~~~ 34 (380)
T 3ax6_A 1 MKKIGIIGGG-----QLGKMMTLEAKKMGFYVIVLDPTP 34 (380)
T ss_dssp CCEEEEECCS-----HHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4689988753 234668888999999999888754
No 312
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=24.04 E-value=71 Score=26.97 Aligned_cols=37 Identities=8% Similarity=-0.007 Sum_probs=24.0
Q ss_pred CCEEEEEc-CCC--ccCHHHHHH-HHHHHHhCC--CeEEEEeC
Q 011724 9 KPHAIAIC-YPL--QGHVIPFVN-LALKLASSG--FTITFVNT 45 (478)
Q Consensus 9 ~~~il~~~-~~~--~GH~~p~l~-La~~L~~rG--h~Vt~~~~ 45 (478)
||||+++. .+. .|+..-+.. +++.|.++| ++|.++--
T Consensus 1 Mmkilii~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl 43 (201)
T 1t5b_A 1 MSKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDL 43 (201)
T ss_dssp CCEEEEEECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEET
T ss_pred CCeEEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 57887766 444 266666554 567777766 88887754
No 313
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=24.02 E-value=75 Score=25.34 Aligned_cols=33 Identities=18% Similarity=0.124 Sum_probs=24.0
Q ss_pred CCccEEEEcCCch--hhHHHHHHc-------CCccEEEecch
Q 011724 121 PEMNCLVTDTFFV--WSSMIAKKY-------NLVNISFWTEP 153 (478)
Q Consensus 121 ~~pD~vi~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 153 (478)
.+||+||.|...+ -|..+++.+ .+|.|.++...
T Consensus 56 ~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 56 GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 3699999998764 466776654 48888887543
No 314
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=24.00 E-value=73 Score=29.18 Aligned_cols=38 Identities=18% Similarity=0.151 Sum_probs=23.5
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 5 HKKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 5 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
+.+++++|++. ++.|-+- ..|+++|.++||+|+.+...
T Consensus 8 ~~~~~~~vlVT--GatG~iG--~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 8 HHHGSMRALIT--GVAGFVG--KYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp -----CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred cccCcceEEEE--CCCChHH--HHHHHHHHHCCCEEEEEecC
Confidence 44556776655 3444443 46889999999999987654
No 315
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=23.78 E-value=58 Score=30.44 Aligned_cols=35 Identities=9% Similarity=-0.034 Sum_probs=24.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
+|+|++.- +.|.+- ..|++.|.++||+|+.++-..
T Consensus 10 ~~~IlVtG--atG~iG--~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIAG--ATGFIG--QFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp -CCEEEEC--TTSHHH--HHHHHHHHHTTCCEEEEECSS
T ss_pred CCeEEEEC--CCcHHH--HHHHHHHHHCCCCEEEEECCC
Confidence 46777664 444433 457889999999999998755
No 316
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=23.78 E-value=3.6e+02 Score=26.21 Aligned_cols=36 Identities=11% Similarity=-0.041 Sum_probs=24.9
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEC
Q 011724 284 GSVLYVSFGSYAHASKNDIVEIALGLLLSEVSFVWVLR 321 (478)
Q Consensus 284 ~~~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~ 321 (478)
.+.|-|-+||.. +....++....|+..|.++-+.+.
T Consensus 265 ~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~ 300 (425)
T 2h31_A 265 QCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVT 300 (425)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeee
Confidence 356777777765 456667788888888887655554
No 317
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=23.75 E-value=1e+02 Score=24.86 Aligned_cols=97 Identities=13% Similarity=0.119 Sum_probs=56.0
Q ss_pred EEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCCCCCCCCCC
Q 011724 13 IAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLPLNFDRSL 92 (478)
Q Consensus 13 l~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 92 (478)
+|++.. ..+=.-++.+|+.|.+.|+++ +++..-...++ .. ++....+......+...
T Consensus 27 vliSv~-d~dK~~l~~~a~~l~~lGf~i--~AT~GTa~~L~---~~---------------Gi~v~~v~k~~egg~~~-- 83 (143)
T 2yvq_A 27 ILIGIQ-QSFRPRFLGVAEQLHNEGFKL--FATEATSDWLN---AN---------------NVPATPVAWPSQEGQNP-- 83 (143)
T ss_dssp EEEECC-GGGHHHHHHHHHHHHTTTCEE--EEEHHHHHHHH---HT---------------TCCCEEECCGGGC------
T ss_pred EEEEec-ccchHHHHHHHHHHHHCCCEE--EECchHHHHHH---Hc---------------CCeEEEEEeccCCCccc--
Confidence 444433 345667889999999999974 44455566776 56 45544443221100000
Q ss_pred CHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCc--------hhhHHHHHHcCCccEEE
Q 011724 93 NHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFF--------VWSSMIAKKYNLVNISF 149 (478)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~--------~~~~~~A~~lgiP~v~~ 149 (478)
..+.+.+++++ .+.|+||-..-. +.-...|-.++||+++-
T Consensus 84 ------------~~~~i~d~i~~-----g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 84 ------------SLSSIRKLIRD-----GSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp -------------CBCHHHHHHT-----TSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred ------------ccccHHHHHHC-----CCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 00123344444 679999986532 23456688899999774
No 318
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=23.73 E-value=1.3e+02 Score=28.81 Aligned_cols=46 Identities=15% Similarity=0.209 Sum_probs=29.1
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 1 MENNHKKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 1 ~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|......+|+||+|+.+++.- ..-+....+.|.+.|++|++++...
T Consensus 2 m~~~~~~~mkkV~ILl~dgf~-~~El~~p~dvL~~Ag~~v~vvS~~~ 47 (365)
T 3fse_A 2 MTNHNNSGKKKVAILIEQAVE-DTEFIIPCNGLKQAGFEVVVLGSRM 47 (365)
T ss_dssp ---------CEEEEECCTTBC-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCCCCCceEEEEEECCCCc-HHHHHHHHHHHHHCCCEEEEEECCC
Confidence 433345677899999988664 3445556688888999999999765
No 319
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=23.66 E-value=68 Score=28.47 Aligned_cols=36 Identities=17% Similarity=0.074 Sum_probs=26.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
...+||.|+-.+..| .+||+.|++.||+|++.....
T Consensus 17 ~~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESCH
T ss_pred cCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCCh
Confidence 345899999666555 457999999999999886543
No 320
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=23.64 E-value=3.6e+02 Score=23.34 Aligned_cols=36 Identities=6% Similarity=-0.009 Sum_probs=23.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCc
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASS--GFTITFVNTHS 47 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~ 47 (478)
|+||+++..+. | .-+.+|.++.++. ..+|..+.+..
T Consensus 2 m~riavl~Sg~-G--snl~ali~~~~~~~l~~eI~~Visn~ 39 (211)
T 3p9x_A 2 MKRVAIFASGS-G--TNAEAIIQSQKAGQLPCEVALLITDK 39 (211)
T ss_dssp -CEEEEECCTT-C--HHHHHHHHHHHTTCCSSEEEEEEESC
T ss_pred CCEEEEEEeCC-c--hHHHHHHHHHHcCCCCcEEEEEEECC
Confidence 68999988775 4 3367777776543 35888777753
No 321
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=23.63 E-value=69 Score=28.32 Aligned_cols=40 Identities=10% Similarity=0.156 Sum_probs=32.2
Q ss_pred HHHHHHHHHhhccCCCccEEEEcCCchhhHHHHHHcCCccEEEec
Q 011724 107 AHVDELVGNLIQLNPEMNCLVTDTFFVWSSMIAKKYNLVNISFWT 151 (478)
Q Consensus 107 ~~~~~ll~~l~~~~~~pD~vi~D~~~~~~~~~A~~lgiP~v~~~~ 151 (478)
..++..++.++. .+.|+||.|. .+..+|+++|+|.+.+.+
T Consensus 141 ee~~~~i~~l~~--~G~~vVVG~~---~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 141 EDARGQINELKA--NGTEAVVGAG---LITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHH--TTCCEEEESH---HHHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHH--CCCCEEECCH---HHHHHHHHcCCcEEEECC
Confidence 456677777776 6799999985 457899999999999884
No 322
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=23.50 E-value=53 Score=30.05 Aligned_cols=36 Identities=22% Similarity=0.176 Sum_probs=24.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
++++|++.- +.|.+- ..|++.|.++||+|+.++-..
T Consensus 6 ~~~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~~ 41 (321)
T 3vps_A 6 LKHRILITG--GAGFIG--GHLARALVASGEEVTVLDDLR 41 (321)
T ss_dssp -CCEEEEET--TTSHHH--HHHHHHHHHTTCCEEEECCCS
T ss_pred CCCeEEEEC--CCChHH--HHHHHHHHHCCCEEEEEecCC
Confidence 357777664 444443 368899999999999987544
No 323
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=23.44 E-value=47 Score=30.18 Aligned_cols=45 Identities=7% Similarity=0.006 Sum_probs=38.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHH--------HHhC-CCeEEEEeCCchhhhh
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALK--------LASS-GFTITFVNTHSIHHQI 52 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~--------L~~r-Gh~Vt~~~~~~~~~~~ 52 (478)
+..+|++.+.++-.|-....-++.. |..+ |++|+..+.....+.+
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~i 172 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDF 172 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHH
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHH
Confidence 3578999999999999999999988 9999 9999998886655444
No 324
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=23.28 E-value=75 Score=29.39 Aligned_cols=33 Identities=18% Similarity=0.115 Sum_probs=22.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNT 45 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 45 (478)
||+|++.- +.|-+- ..|++.|.++||+|+.+..
T Consensus 1 M~~vlVTG--atG~iG--~~l~~~L~~~g~~V~~~~r 33 (347)
T 1orr_A 1 MAKLLITG--GCGFLG--SNLASFALSQGIDLIVFDN 33 (347)
T ss_dssp -CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred CcEEEEeC--CCchhH--HHHHHHHHhCCCEEEEEeC
Confidence 46766653 444332 4678999999999999864
No 325
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=23.26 E-value=3.4e+02 Score=23.47 Aligned_cols=112 Identities=10% Similarity=0.058 Sum_probs=60.3
Q ss_pred CCEEEEEcCCCccCHHH----HHHHHHHHHhC-CCeEEEEeC-CchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCC
Q 011724 9 KPHAIAICYPLQGHVIP----FVNLALKLASS-GFTITFVNT-HSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSD 82 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p----~l~La~~L~~r-Gh~Vt~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 82 (478)
|.+|+++.--..|.+.| ++..|++|++. |-+|+.++- +...+.++.+... |+ ..+-...-+
T Consensus 3 m~~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~~~--------Ga----d~v~~v~~~- 69 (217)
T 3ih5_A 3 ANNLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILPY--------GV----DKLHVFDAE- 69 (217)
T ss_dssp CCCEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGGG--------TC----SEEEEEECG-
T ss_pred cccEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHhc--------CC----CEEEEecCc-
Confidence 56788888655566555 57778889873 766665553 2233333322233 21 012222111
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCch---hhHHHHHHcCCccEEEec
Q 011724 83 GLPLNFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFFV---WSSMIAKKYNLVNISFWT 151 (478)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~~---~~~~~A~~lgiP~v~~~~ 151 (478)
.+. ......+ ...+.++++.. +||+|++-.... .+..+|.++|+|.+.-++
T Consensus 70 ~~~-----~~~~~~~--------a~~l~~~i~~~-----~p~~Vl~g~t~~G~~laprlAa~L~~~~~sdv~ 123 (217)
T 3ih5_A 70 GLY-----PYTSLPH--------TSILVNLFKEE-----QPQICLMGATVIGRDLGPRVSSALTSGLTADCT 123 (217)
T ss_dssp GGS-----SCCHHHH--------HHHHHHHHHHH-----CCSEEEEECSHHHHHHHHHHHHHTTCCCBCSCS
T ss_pred ccc-----cCCHHHH--------HHHHHHHHHhc-----CCCEEEEeCCcchhhHHHHHHHHhCCCccceEE
Confidence 100 0011111 12233455553 499999987553 456889999999987543
No 326
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=23.26 E-value=1.2e+02 Score=27.53 Aligned_cols=38 Identities=11% Similarity=0.093 Sum_probs=23.4
Q ss_pred CCEEEEEc-CCCc-cCHHHHHH-HHHHHHhCCCeEEEEeCC
Q 011724 9 KPHAIAIC-YPLQ-GHVIPFVN-LALKLASSGFTITFVNTH 46 (478)
Q Consensus 9 ~~~il~~~-~~~~-GH~~p~l~-La~~L~~rGh~Vt~~~~~ 46 (478)
|||||++. .|-. |+..-+.. +++.|.+.||+|+++--.
T Consensus 2 MmkiLiI~gSpr~~s~t~~la~~~~~~l~~~g~eV~~~dL~ 42 (273)
T 1d4a_A 2 GRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLY 42 (273)
T ss_dssp CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred CCEEEEEEeCCCCccHHHHHHHHHHHHHHhCCCeEEEEEcc
Confidence 67887776 3332 33333333 566677789999987543
No 327
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=23.16 E-value=2.8e+02 Score=28.03 Aligned_cols=76 Identities=12% Similarity=0.019 Sum_probs=44.6
Q ss_pred HHHHHHHHHhhCCCeEEEEECCCC-CCCCccCCCChhhhhhhccCCCeEEeeccC-h---------HhhhhccCcceeee
Q 011724 301 DIVEIALGLLLSEVSFVWVLRPDI-VSSDETDFLPVGFEEKIKISGRGLIVPWCS-Q---------IDVISHSAIGGFLT 369 (478)
Q Consensus 301 ~~~~~~~al~~~~~~~i~~~~~~~-~~~~~~~~l~~~~~~~~~~~~nv~v~~~ip-q---------~~vL~~~~v~~~It 369 (478)
.-+.+++.|++.|.+.++.+.+.. . + .+.+. +.+ +..+.-.. | ..+-..+. ++++
T Consensus 14 ~a~~l~~~L~~~GV~~vfg~PG~~~~-------~--~l~~a--l~~-i~~i~~~~E~~Aa~~A~Gyar~tg~p~--v~~~ 79 (573)
T 2iht_A 14 AAHALLSRLRDHGVGKVFGVVGREAA-------S--ILFDE--VEG-IDFVLTRHEFTAGVAADVLARITGRPQ--ACWA 79 (573)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCGGGG-------T--CCSCS--STT-CEEEECSSHHHHHHHHHHHHHHHCSCE--EEEE
T ss_pred HHHHHHHHHHHCCCCEEEEecCCcch-------h--HHHHH--HcC-CeEEeeCCHHHHHHHHHHHHHHHCCCE--EEEE
Confidence 346678888888888888776651 1 0 11111 111 33322221 1 11222344 4999
Q ss_pred ccCch------hhHHHHhcCcceeccC
Q 011724 370 HCGWN------SIQESIWCSVPLLCFP 390 (478)
Q Consensus 370 HGG~~------s~~Eal~~GvP~l~~P 390 (478)
|.|-| .+.||-+.++|||++-
T Consensus 80 TsGpG~~N~~~~v~~A~~~~~Pll~it 106 (573)
T 2iht_A 80 TLGPGMTNLSTGIATSVLDRSPVIALA 106 (573)
T ss_dssp CTTHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ccCchHHHHHHHHHHHHhhCCCEEEEc
Confidence 99965 6889999999999873
No 328
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=23.14 E-value=74 Score=30.30 Aligned_cols=37 Identities=19% Similarity=0.275 Sum_probs=23.6
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011724 5 HKKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNT 45 (478)
Q Consensus 5 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 45 (478)
+..++++|++.- +.|.+- ..|++.|.++||+|+.+..
T Consensus 7 ~~~~~~~vlVTG--~tGfIG--~~l~~~L~~~G~~V~~~~r 43 (404)
T 1i24_A 7 HHHHGSRVMVIG--GDGYCG--WATALHLSKKNYEVCIVDN 43 (404)
T ss_dssp -----CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred cccCCCeEEEeC--CCcHHH--HHHHHHHHhCCCeEEEEEe
Confidence 445678888764 444443 4578999999999999864
No 329
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=23.07 E-value=76 Score=28.84 Aligned_cols=32 Identities=22% Similarity=0.238 Sum_probs=25.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
|||.|+-.+..| ..+|+.|+++||+|+++...
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcCC
Confidence 789888766555 56789999999999987654
No 330
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=23.04 E-value=70 Score=27.95 Aligned_cols=40 Identities=13% Similarity=0.077 Sum_probs=31.6
Q ss_pred CCEEEEEc--CCCccCHHHHHHHHHHHHhC-CCeEEEEeCCch
Q 011724 9 KPHAIAIC--YPLQGHVIPFVNLALKLASS-GFTITFVNTHSI 48 (478)
Q Consensus 9 ~~~il~~~--~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~ 48 (478)
++|++.+. -++-|-..-...||..|+++ |++|.++=.+..
T Consensus 3 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 3 AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 45554443 56779999999999999998 999999977643
No 331
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=22.97 E-value=2e+02 Score=29.23 Aligned_cols=26 Identities=19% Similarity=0.342 Sum_probs=22.2
Q ss_pred ceeeeccCch------hhHHHHhcCcceeccC
Q 011724 365 GGFLTHCGWN------SIQESIWCSVPLLCFP 390 (478)
Q Consensus 365 ~~~ItHGG~~------s~~Eal~~GvP~l~~P 390 (478)
+++++|.|-| .+.||-+.++|||++-
T Consensus 76 gv~~~TsGpG~~N~~~gia~A~~d~vPll~it 107 (578)
T 3lq1_A 76 VVLLCTSGTAAANYFPAVAEANLSQIPLIVLT 107 (578)
T ss_dssp EEEEECSSHHHHTTHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCchhhhhhhHHHHHHHhcCCCeEEEe
Confidence 3499999965 7899999999999985
No 332
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=22.95 E-value=73 Score=27.26 Aligned_cols=32 Identities=25% Similarity=0.228 Sum_probs=23.4
Q ss_pred CEEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 10 PHAIAIC-YPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 10 ~~il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
|||+++- .+..| ..+|+.|.++||+|+++...
T Consensus 1 m~i~iiGa~G~~G-----~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLGGTGNLG-----KGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEcCCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 5788774 43334 46788999999999988654
No 333
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=22.94 E-value=4e+02 Score=23.60 Aligned_cols=85 Identities=8% Similarity=-0.003 Sum_probs=0.0
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHH--HHHHHHHHHhCCCeEEE-EeCCchhhhhhhhcCCCCCcchhccccCCCCCeEE
Q 011724 1 MENNHKKPKPHAIAICYPLQGHVIP--FVNLALKLASSGFTITF-VNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRY 77 (478)
Q Consensus 1 ~~~~~~~~~~~il~~~~~~~GH~~p--~l~La~~L~~rGh~Vt~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 77 (478)
|+.. .+|+++.......+.. ...+-+++.++|+++.+ ..+....+...
T Consensus 1 ~s~~-----~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~------------------------ 51 (305)
T 3g1w_A 1 MSLN-----ETYMMITFQSGMDYWKRCLKGFEDAAQALNVTVEYRGAAQYDIQEQI------------------------ 51 (305)
T ss_dssp ---------CEEEEEESSTTSTHHHHHHHHHHHHHHHHTCEEEEEECSSSCHHHHH------------------------
T ss_pred CCCC-----ceEEEEEccCCChHHHHHHHHHHHHHHHcCCEEEEeCCCcCCHHHHH------------------------
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCchh----hHHHHHHcCCccEEE
Q 011724 78 ATVSDGLPLNFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFFVW----SSMIAKKYNLVNISF 149 (478)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~~~----~~~~A~~lgiP~v~~ 149 (478)
+.++.+.. .++|.||+...... ....+...|||+|.+
T Consensus 52 ---------------------------------~~i~~l~~--~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~ 92 (305)
T 3g1w_A 52 ---------------------------------TVLEQAIA--KNPAGIAISAIDPVELTDTINKAVDAGIPIVLF 92 (305)
T ss_dssp ---------------------------------HHHHHHHH--HCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEE
T ss_pred ---------------------------------HHHHHHHH--hCCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEE
No 334
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=22.88 E-value=1.1e+02 Score=23.66 Aligned_cols=33 Identities=12% Similarity=0.117 Sum_probs=21.7
Q ss_pred CCccEEEEcCCch--hhHHHHHHc-------CCccEEEecch
Q 011724 121 PEMNCLVTDTFFV--WSSMIAKKY-------NLVNISFWTEP 153 (478)
Q Consensus 121 ~~pD~vi~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 153 (478)
..||+||+|...+ .+..+++.+ .+|.|.++...
T Consensus 47 ~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 47 NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 4699999998653 344444432 57888877543
No 335
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=22.83 E-value=4.3e+02 Score=25.79 Aligned_cols=84 Identities=12% Similarity=-0.096 Sum_probs=47.1
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEECCCCCCCCccCCCChhhhhhhccCCCeEEeeccChHhhhhcc
Q 011724 283 RGSVLYVSFGSYAHASKNDIVEIALGLLLSEVSFVWVLRPDIVSSDETDFLPVGFEEKIKISGRGLIVPWCSQIDVISHS 362 (478)
Q Consensus 283 ~~~~Vyvs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~nv~v~~~ipq~~vL~~~ 362 (478)
.+.++.+..|... ...+..|.+.|..+.++-... .+.+..- ....++.+..---+...|..+
T Consensus 12 ~~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~~----------~~~~~~l-~~~~~i~~~~~~~~~~~l~~~ 73 (457)
T 1pjq_A 12 DRDCLIVGGGDVA-------ERKARLLLEAGARLTVNALTF----------IPQFTVW-ANEGMLTLVEGPFDETLLDSC 73 (457)
T ss_dssp TCEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESSC----------CHHHHHH-HTTTSCEEEESSCCGGGGTTC
T ss_pred CCEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCCC----------CHHHHHH-HhcCCEEEEECCCCccccCCc
Confidence 3568888887765 445566777888877665422 1222221 011345443222223345666
Q ss_pred CcceeeeccCchh-----hHHHHhcCcce
Q 011724 363 AIGGFLTHCGWNS-----IQESIWCSVPL 386 (478)
Q Consensus 363 ~v~~~ItHGG~~s-----~~Eal~~GvP~ 386 (478)
++ +|.--|.-. ..+|-..|+|+
T Consensus 74 ~l--Vi~at~~~~~n~~i~~~a~~~~i~v 100 (457)
T 1pjq_A 74 WL--AIAATDDDTVNQRVSDAAESRRIFC 100 (457)
T ss_dssp SE--EEECCSCHHHHHHHHHHHHHTTCEE
T ss_pred cE--EEEcCCCHHHHHHHHHHHHHcCCEE
Confidence 76 888878764 44556678886
No 336
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=22.83 E-value=73 Score=27.98 Aligned_cols=39 Identities=15% Similarity=0.117 Sum_probs=22.1
Q ss_pred CCCCCEEEEEcC-CC----ccCHHHHHH-HHHHHHhC--CC-eEEEEe
Q 011724 6 KKPKPHAIAICY-PL----QGHVIPFVN-LALKLASS--GF-TITFVN 44 (478)
Q Consensus 6 ~~~~~~il~~~~-~~----~GH~~p~l~-La~~L~~r--Gh-~Vt~~~ 44 (478)
++.||||+++.. |- .|.-.-+.. +++.|.++ || +|+++-
T Consensus 1 ~~~MmkIL~I~gSpr~~~~~S~s~~L~~~~~~~l~~~~~~~~ev~~id 48 (223)
T 3u7i_A 1 SNAMNKTLIINAHPKVDDTSSVSIKVFKHFLESYKELISNNETIEQIN 48 (223)
T ss_dssp --CCCEEEEEECCTTTTCTTSHHHHHHHHHHHHHHHHCCSSCEEEEEE
T ss_pred CCccCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 467899988763 32 233333333 55566554 68 887764
No 337
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=22.76 E-value=1.8e+02 Score=23.60 Aligned_cols=38 Identities=3% Similarity=0.047 Sum_probs=29.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
.|||+|+.+++.-. .-+....+.|.+.|++|.+++...
T Consensus 2 ~~ki~il~~~g~~~-~e~~~~~~~l~~ag~~v~~vs~~~ 39 (168)
T 3l18_A 2 SMKVLFLSADGFED-LELIYPLHRIKEEGHEVYVASFQR 39 (168)
T ss_dssp CCEEEEECCTTBCH-HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcEEEEEeCCCccH-HHHHHHHHHHHHCCCEEEEEECCC
Confidence 48999998876533 445566788888999999998764
No 338
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=22.74 E-value=51 Score=32.46 Aligned_cols=42 Identities=12% Similarity=0.166 Sum_probs=26.9
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 1 MENNHKKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 1 ~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|.+.......+|+++-.+-.| +..|..|+++|++|+++=...
T Consensus 3 ~~~~~~~~~~dvvVIGaG~~G-----L~aA~~La~~G~~V~vlE~~~ 44 (453)
T 2bcg_G 3 MDQETIDTDYDVIVLGTGITE-----CILSGLLSVDGKKVLHIDKQD 44 (453)
T ss_dssp ----CCCCBCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSSS
T ss_pred CchhhccccCCEEEECcCHHH-----HHHHHHHHHCCCeEEEEeCCC
Confidence 444433344678877655333 678889999999999986543
No 339
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=22.66 E-value=49 Score=30.80 Aligned_cols=31 Identities=16% Similarity=0.135 Sum_probs=24.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNT 45 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 45 (478)
|||+|+-.+..| ..+|..|+++||+|+++..
T Consensus 1 m~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 588888766555 4568899999999999876
No 340
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=22.65 E-value=4.4e+02 Score=23.98 Aligned_cols=104 Identities=11% Similarity=0.181 Sum_probs=58.9
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCc--hhhhhhhhcCCCCCcchhccccCCCCCeEEEEcC
Q 011724 6 KKPKPHAIAICYPLQGHVIPFVNLALKLASS--GFTITFVNTHS--IHHQITKAQSNGDEDDIFAGARKAGLDIRYATVS 81 (478)
Q Consensus 6 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 81 (478)
+.+++||+++..+. || -+.+|..+-.+. ..+|..+.+.. .....+ .. +|.+..+|
T Consensus 87 ~~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~---~~---------------gIp~~~~~ 145 (286)
T 3n0v_A 87 PNHRPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAH---WH---------------KIPYYHFA 145 (286)
T ss_dssp TTCCCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHH---HT---------------TCCEEECC
T ss_pred CCCCcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHH---Hc---------------CCCEEEeC
Confidence 45678999888666 43 455666665442 47888777643 344444 55 78887776
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCc-hhhHHHHHHcCCccEEEe
Q 011724 82 DGLPLNFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFF-VWSSMIAKKYNLVNISFW 150 (478)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~-~~~~~~A~~lgiP~v~~~ 150 (478)
.... +-.. ....+.++++. .+||+||.=.+. .-...+...+.-.++-+.
T Consensus 146 ~~~~-------~r~~--------~~~~~~~~l~~-----~~~Dlivla~y~~il~~~~l~~~~~~~iNiH 195 (286)
T 3n0v_A 146 LDPK-------DKPG--------QERKVLQVIEE-----TGAELVILARYMQVLSPELCRRLDGWAINIH 195 (286)
T ss_dssp CBTT-------BHHH--------HHHHHHHHHHH-----HTCSEEEESSCCSCCCHHHHHHTTTSEEEEE
T ss_pred CCcC-------CHHH--------HHHHHHHHHHh-----cCCCEEEecccccccCHHHHhhhcCCeEEec
Confidence 4311 1001 11223344444 359999998765 444455555555555553
No 341
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=22.65 E-value=1.1e+02 Score=25.84 Aligned_cols=36 Identities=14% Similarity=0.146 Sum_probs=29.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNT 45 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 45 (478)
..++++..+..|+-.-...+++.|+++|+.|..+-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 456777777778878889999999999998877654
No 342
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=22.62 E-value=61 Score=32.03 Aligned_cols=33 Identities=15% Similarity=0.140 Sum_probs=26.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|||.|+-.+..| +++|..|+++||+|+++-...
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECCH
Confidence 799998665545 578999999999999887654
No 343
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=22.43 E-value=62 Score=30.67 Aligned_cols=32 Identities=16% Similarity=0.255 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNT 45 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 45 (478)
+++|+++-.+-.| +.+|..|+++|++|+++-.
T Consensus 11 ~~dVvIVGaG~aG-----l~~A~~L~~~G~~v~viE~ 42 (379)
T 3alj_A 11 TRRAEVAGGGFAG-----LTAAIALKQNGWDVRLHEK 42 (379)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECCCHHH-----HHHHHHHHHCCCCEEEEec
Confidence 4689888765445 6788999999999999854
No 344
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=22.38 E-value=4.4e+02 Score=23.96 Aligned_cols=104 Identities=9% Similarity=0.150 Sum_probs=56.8
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCc---hhhhhhhhcCCCCCcchhccccCCCCCeEEEEc
Q 011724 6 KKPKPHAIAICYPLQGHVIPFVNLALKLASS--GFTITFVNTHS---IHHQITKAQSNGDEDDIFAGARKAGLDIRYATV 80 (478)
Q Consensus 6 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (478)
+.+++||+++..+. || -+.+|..+-++. ..+|..+.+.. ..+.++ .. +|.+..+
T Consensus 86 ~~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~---~~---------------gIp~~~~ 144 (288)
T 3obi_A 86 RETRRKVMLLVSQS-DH--CLADILYRWRVGDLHMIPTAIVSNHPRETFSGFD---FG---------------DIPFYHF 144 (288)
T ss_dssp TTSCEEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTT---TT---------------TCCEEEC
T ss_pred cCCCcEEEEEEcCC-CC--CHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHH---Hc---------------CCCEEEe
Confidence 45678998888665 44 445566655442 35777777654 222222 33 7888877
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCc-hhhHHHHHHcCCccEEEe
Q 011724 81 SDGLPLNFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFF-VWSSMIAKKYNLVNISFW 150 (478)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~-~~~~~~A~~lgiP~v~~~ 150 (478)
|.... + .. .....+.++++. .+||+||.=.+. .-...+...+.-.++-+.
T Consensus 145 ~~~~~-------~-r~-------~~~~~~~~~l~~-----~~~Dlivlagy~~il~~~~l~~~~~~~iNiH 195 (288)
T 3obi_A 145 PVNKD-------T-RR-------QQEAAITALIAQ-----THTDLVVLARYMQILSDEMSARLAGRCINIH 195 (288)
T ss_dssp CCCTT-------T-HH-------HHHHHHHHHHHH-----HTCCEEEESSCCSCCCHHHHHHTTTSEEEEE
T ss_pred CCCcc-------c-HH-------HHHHHHHHHHHh-----cCCCEEEhhhhhhhCCHHHHhhhcCCeEEeC
Confidence 64321 0 00 011223344444 359999998765 444455555555555553
No 345
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=22.37 E-value=68 Score=29.01 Aligned_cols=32 Identities=22% Similarity=0.106 Sum_probs=24.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
||||+|+-.+..|. .+|..|.+ ||+|+++...
T Consensus 1 M~~i~iiG~G~~G~-----~~a~~l~~-g~~V~~~~~~ 32 (289)
T 2cvz_A 1 MEKVAFIGLGAMGY-----PMAGHLAR-RFPTLVWNRT 32 (289)
T ss_dssp -CCEEEECCSTTHH-----HHHHHHHT-TSCEEEECSS
T ss_pred CCeEEEEcccHHHH-----HHHHHHhC-CCeEEEEeCC
Confidence 57899997776664 46888889 9999887653
No 346
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=22.29 E-value=99 Score=24.69 Aligned_cols=36 Identities=25% Similarity=0.219 Sum_probs=26.0
Q ss_pred CCEEEEEcCCCccCHHHHH-HHHHHHHhCCCeEEEEe
Q 011724 9 KPHAIAICYPLQGHVIPFV-NLALKLASSGFTITFVN 44 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l-~La~~L~~rGh~Vt~~~ 44 (478)
||||+++=.-..|+..-+- .|++.|.+.|++|..+-
T Consensus 1 M~ki~I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~ 37 (147)
T 2hna_A 1 MADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLH 37 (147)
T ss_dssp CCSEEEECCTTSCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCeEEEEEECCchHHHHHHHHHHHHHHHCCCceEEec
Confidence 4567666555568877654 47888988999998764
No 347
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=22.28 E-value=2.1e+02 Score=22.38 Aligned_cols=39 Identities=8% Similarity=0.119 Sum_probs=24.8
Q ss_pred cCcceeccCcccchhHHHHHhhc--------ccCHHHHHHHHHHHhC
Q 011724 382 CSVPLLCFPLLTDQFTNRKLVKS--------SITKEEVSEKINRLMS 420 (478)
Q Consensus 382 ~GvP~l~~P~~~DQ~~na~rv~~--------~~t~~~l~~~v~~ll~ 420 (478)
..+|+|++--..|.......+.. .++.++|...|++++.
T Consensus 74 ~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~L~~~i~~~~~ 120 (155)
T 1qkk_A 74 PDLPMILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQSARRAEE 120 (155)
T ss_dssp TTSCEEEEECGGGHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHhcCCCeEEeCCCCHHHHHHHHHHHHH
Confidence 46777776544443222222222 6789999999999997
No 348
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=22.23 E-value=51 Score=32.85 Aligned_cols=33 Identities=27% Similarity=0.436 Sum_probs=26.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
++||.|+-.+..| ..+|..|+++||+|+++...
T Consensus 5 ~~~IgvIG~G~mG-----~~lA~~L~~~G~~V~v~dr~ 37 (474)
T 2iz1_A 5 QANFGVVGMAVMG-----KNLALNVESRGYTVAIYNRT 37 (474)
T ss_dssp TBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCcEEEEeeHHHH-----HHHHHHHHhCCCEEEEEcCC
Confidence 4789999776666 45788999999999887653
No 349
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=22.21 E-value=94 Score=26.62 Aligned_cols=45 Identities=13% Similarity=0.155 Sum_probs=30.5
Q ss_pred CCCEEEEEcCCC-c--cCHHHHHHHHHHHHhCCCeEEEEeCC-chhhhh
Q 011724 8 PKPHAIAICYPL-Q--GHVIPFVNLALKLASSGFTITFVNTH-SIHHQI 52 (478)
Q Consensus 8 ~~~~il~~~~~~-~--GH~~p~l~La~~L~~rGh~Vt~~~~~-~~~~~~ 52 (478)
.+|+|.+++... . -+..-...|++.|+++|+.|..-..+ ...+.+
T Consensus 12 ~~~~I~Vfg~s~~~~~~~~~~A~~lg~~la~~g~~lv~GGG~~GlM~a~ 60 (189)
T 3sbx_A 12 GRWTVAVYCAAAPTHPELLELAGAVGAAIAARGWTLVWGGGHVSAMGAV 60 (189)
T ss_dssp -CCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEECCBCSHHHHHH
T ss_pred CCeEEEEEEeCCCCChHHHHHHHHHHHHHHHCCCEEEECCCccCHHHHH
Confidence 448999988544 1 22345677888899999998887655 544444
No 350
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=22.21 E-value=2.5e+02 Score=28.70 Aligned_cols=27 Identities=30% Similarity=0.476 Sum_probs=22.1
Q ss_pred cceeeeccCc------hhhHHHHhcCcceeccC
Q 011724 364 IGGFLTHCGW------NSIQESIWCSVPLLCFP 390 (478)
Q Consensus 364 v~~~ItHGG~------~s~~Eal~~GvP~l~~P 390 (478)
++++++|.|- +.++||-+.++|||++-
T Consensus 92 ~~v~~~TsGpG~~N~~~~l~~A~~~~vPlvvIt 124 (616)
T 2pan_A 92 IGVCLGTSGPAGTDMITALYSASADSIPILCIT 124 (616)
T ss_dssp CEEEEECSTHHHHTSHHHHHHHHHTTCCEEEEE
T ss_pred ceEEEeCCCchHHHHHHHHHHHHhcCCCEEEEe
Confidence 3447888885 58999999999999874
No 351
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=22.17 E-value=91 Score=28.23 Aligned_cols=41 Identities=24% Similarity=0.302 Sum_probs=32.2
Q ss_pred CCCEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCch
Q 011724 8 PKPHAIAIC--YPLQGHVIPFVNLALKLASSGFTITFVNTHSI 48 (478)
Q Consensus 8 ~~~~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 48 (478)
+++|+++++ -++-|-..-...||..|++.|.+|.++-.+..
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 345555554 46779999999999999999999999876643
No 352
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=22.03 E-value=96 Score=28.62 Aligned_cols=34 Identities=12% Similarity=0.128 Sum_probs=24.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC-C-CeEEEEeCCc
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASS-G-FTITFVNTHS 47 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~r-G-h~Vt~~~~~~ 47 (478)
++|||+++..+.. .+|++.|++. | ++|..+....
T Consensus 3 ~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~~ 38 (331)
T 2pn1_A 3 QKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCSP 38 (331)
T ss_dssp TCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESCT
T ss_pred ccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCCC
Confidence 4489999865544 4799999886 7 8888776543
No 353
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=21.99 E-value=1.6e+02 Score=24.37 Aligned_cols=43 Identities=5% Similarity=-0.101 Sum_probs=35.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCchhhhhh
Q 011724 11 HAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQIT 53 (478)
Q Consensus 11 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 53 (478)
-.+++..+..--+++.+-||..-+.-|++|+++.+......++
T Consensus 7 l~II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf~Gl~~l~ 49 (160)
T 3pnx_A 7 MNLLLFSGDYDKALASLIIANAAREMEIEVTIFCAFWGLLLLR 49 (160)
T ss_dssp EEEEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECGGGGGGGB
T ss_pred EEEEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEeehhHHHhc
Confidence 3445556677888999999999999999999999988887776
No 354
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=21.91 E-value=1.3e+02 Score=27.57 Aligned_cols=37 Identities=11% Similarity=0.048 Sum_probs=23.7
Q ss_pred CCCCEEEEEc-CCCccCHHHHH--HHHHHHHhCCCeEEEE
Q 011724 7 KPKPHAIAIC-YPLQGHVIPFV--NLALKLASSGFTITFV 43 (478)
Q Consensus 7 ~~~~~il~~~-~~~~GH~~p~l--~La~~L~~rGh~Vt~~ 43 (478)
.++||||++- .|-..-++-.+ ..++.|.+.||+|+++
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~ 59 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVS 59 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEE
Confidence 4457886664 55544444433 3677888899999987
No 355
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=21.79 E-value=49 Score=30.00 Aligned_cols=39 Identities=10% Similarity=0.054 Sum_probs=27.8
Q ss_pred CCCCEEEEEcCCCccCHH--HHHHHHHHHHhCCCeEEEEeCCchh
Q 011724 7 KPKPHAIAICYPLQGHVI--PFVNLALKLASSGFTITFVNTHSIH 49 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~--p~l~La~~L~~rGh~Vt~~~~~~~~ 49 (478)
+-|.|||++- ||-. -...|.+.|.+.|++|+++......
T Consensus 2 ~~m~~vLiV~----g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~~ 42 (259)
T 3rht_A 2 NAMTRVLYCG----DTSLETAAGYLAGLMTSWQWEFDYIPSHVGL 42 (259)
T ss_dssp ----CEEEEE----SSCTTTTHHHHHHHHHHTTCCCEEECTTSCB
T ss_pred CCCceEEEEC----CCCchhHHHHHHHHHHhCCceEEEecccccc
Confidence 4578999993 6744 3566888999999999999987763
No 356
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=21.67 E-value=2.6e+02 Score=27.45 Aligned_cols=26 Identities=23% Similarity=0.523 Sum_probs=21.5
Q ss_pred CCccEEEEcCCchhhHHHHHHcCCccEEE
Q 011724 121 PEMNCLVTDTFFVWSSMIAKKYNLVNISF 149 (478)
Q Consensus 121 ~~pD~vi~D~~~~~~~~~A~~lgiP~v~~ 149 (478)
.+||++|.+.. ...+|+++|||++.+
T Consensus 384 ~~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 384 EGVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp SCCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred cCCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 46999998863 467789999999987
No 357
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=21.65 E-value=70 Score=27.48 Aligned_cols=30 Identities=7% Similarity=0.134 Sum_probs=24.9
Q ss_pred ccCcceeeeccCchhhHHHHhcCcceeccCccc
Q 011724 361 HSAIGGFLTHCGWNSIQESIWCSVPLLCFPLLT 393 (478)
Q Consensus 361 ~~~v~~~ItHGG~~s~~Eal~~GvP~l~~P~~~ 393 (478)
.+++ +|+.||........ .++|+|-++..+
T Consensus 51 ~~dV--IISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 51 EVDA--IISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TCSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCeE--EEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 3455 99999999999876 579999999854
No 358
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=21.63 E-value=1.4e+02 Score=30.52 Aligned_cols=26 Identities=15% Similarity=0.341 Sum_probs=22.4
Q ss_pred ceeeeccCc------hhhHHHHhcCcceeccC
Q 011724 365 GGFLTHCGW------NSIQESIWCSVPLLCFP 390 (478)
Q Consensus 365 ~~~ItHGG~------~s~~Eal~~GvP~l~~P 390 (478)
+++++|.|- +.+.||-+.++|||++-
T Consensus 96 gv~~~TsGpG~~N~~~gia~A~~~~vPlv~It 127 (604)
T 2x7j_A 96 VLLICTSGTAAANFYPAVVEAHYSRVPIIVLT 127 (604)
T ss_dssp EEEEECSSHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred EEEEECChhHHHHHHHHHHHHhhcCCCEEEEe
Confidence 349999996 58899999999999985
No 359
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=21.61 E-value=96 Score=30.96 Aligned_cols=34 Identities=21% Similarity=0.206 Sum_probs=27.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVN 44 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 44 (478)
.+++||.|+-.++.| +-++|+.|+++|++|+..=
T Consensus 20 ~~~~~v~viGiG~sG----~s~~A~~l~~~G~~V~~~D 53 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAG----MGGIAEVLANEGYQISGSD 53 (494)
T ss_dssp --CCEEEEETTTSTT----HHHHHHHHHHTTCEEEEEC
T ss_pred ccCCEEEEEEEcHhh----HHHHHHHHHhCCCeEEEEE
Confidence 455899999998877 4458999999999999764
No 360
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=21.60 E-value=80 Score=28.66 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=24.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|++|++.- +.|.+- ..|++.|.++||+|+.++-..
T Consensus 4 ~~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 4 RSRILLIG--ATGYIG--RHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp CCCEEEES--TTSTTH--HHHHHHHHHTTCCEEEECCCC
T ss_pred CCEEEEEc--CCcHHH--HHHHHHHHhCCCCEEEEECCc
Confidence 46776654 444443 357899999999999887653
No 361
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=21.59 E-value=79 Score=30.20 Aligned_cols=38 Identities=16% Similarity=0.073 Sum_probs=28.6
Q ss_pred CCEEEEEcCCCcc-C---HHHHHHHHHHH-HhCCCeEEEEeCC
Q 011724 9 KPHAIAICYPLQG-H---VIPFVNLALKL-ASSGFTITFVNTH 46 (478)
Q Consensus 9 ~~~il~~~~~~~G-H---~~p~l~La~~L-~~rGh~Vt~~~~~ 46 (478)
+|||+++..+-.+ | +.....++++| .++||+|+.+-..
T Consensus 3 k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 3 KKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 4899999754333 3 34568899999 9999999998643
No 362
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=21.59 E-value=64 Score=31.75 Aligned_cols=34 Identities=6% Similarity=0.077 Sum_probs=25.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
|+||+++. .|. -.+.+++++++.|++|+.+.+..
T Consensus 6 ~k~ILI~g---~g~--~~~~i~~a~~~~G~~vv~v~~~~ 39 (461)
T 2dzd_A 6 IRKVLVAN---RGE--IAIRVFRACTELGIRTVAIYSKE 39 (461)
T ss_dssp CSEEEECS---CHH--HHHHHHHHHHHHTCEEEEEECGG
T ss_pred CcEEEEEC---CcH--HHHHHHHHHHHcCCEEEEEECCc
Confidence 46788773 232 25678999999999999887654
No 363
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=21.55 E-value=1.2e+02 Score=22.57 Aligned_cols=33 Identities=9% Similarity=0.174 Sum_probs=21.6
Q ss_pred CCccEEEEcCCch--hhHHHHHH----cCCccEEEecch
Q 011724 121 PEMNCLVTDTFFV--WSSMIAKK----YNLVNISFWTEP 153 (478)
Q Consensus 121 ~~pD~vi~D~~~~--~~~~~A~~----lgiP~v~~~~~~ 153 (478)
.+||+||.|...+ .+..+.+. .++|.+.++...
T Consensus 45 ~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~ 83 (120)
T 3f6p_A 45 LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKD 83 (120)
T ss_dssp TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCC
Confidence 5699999998653 34444433 368888776543
No 364
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=21.55 E-value=75 Score=27.48 Aligned_cols=39 Identities=18% Similarity=0.106 Sum_probs=30.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCch
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASS-GFTITFVNTHSI 48 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~ 48 (478)
|.||+|+.+++...+. +...++.|.++ |++|++++....
T Consensus 3 m~kV~ill~~g~~~~E-~~~~~~~l~~~~~~~v~~vs~~~~ 42 (206)
T 3f5d_A 3 LKKALFLILDQYADWE-GVYLASALNQREDWSVHTVSLDPI 42 (206)
T ss_dssp CEEEEEECCSSBCTTT-SHHHHHHHHTSTTEEEEEEESSSE
T ss_pred ccEEEEEEcCCCcHHH-HHHHHHHHhccCCeEEEEEECCCC
Confidence 5799999988887654 34567788887 999999998764
No 365
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=21.46 E-value=2e+02 Score=29.13 Aligned_cols=26 Identities=8% Similarity=0.151 Sum_probs=21.8
Q ss_pred ceeeeccCc------hhhHHHHhcCcceeccC
Q 011724 365 GGFLTHCGW------NSIQESIWCSVPLLCFP 390 (478)
Q Consensus 365 ~~~ItHGG~------~s~~Eal~~GvP~l~~P 390 (478)
+++++|.|- +.+.||-+.++|||++-
T Consensus 67 ~v~~~TsGpG~~N~~~gia~A~~~~vPll~it 98 (568)
T 2wvg_A 67 AAAVVTYSVGALSAFDAIGGAYAENLPVILIS 98 (568)
T ss_dssp EEEEECTTTTHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eEEEEeCCCCHHHHHHHHHHHhhhCCCEEEEe
Confidence 448888886 58899999999999884
No 366
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=21.44 E-value=36 Score=32.97 Aligned_cols=31 Identities=16% Similarity=0.074 Sum_probs=25.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEe
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLAS-SGFTITFVN 44 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~ 44 (478)
||||+|+-.+..|. .+|..|++ .||+|+++.
T Consensus 2 ~mkI~ViGaG~~G~-----~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 2 TVKVCVCGGGNGAH-----TLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHTTSTTEEEEEEC
T ss_pred CceEEEECCCHHHH-----HHHHHHHhCCCCEEEEEe
Confidence 48999998777665 56888988 599999987
No 367
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=21.42 E-value=3.8e+02 Score=23.95 Aligned_cols=30 Identities=7% Similarity=-0.077 Sum_probs=17.8
Q ss_pred CCccEEEEcCCchhhHHHHHHcCCccEEEe
Q 011724 121 PEMNCLVTDTFFVWSSMIAKKYNLVNISFW 150 (478)
Q Consensus 121 ~~pD~vi~D~~~~~~~~~A~~lgiP~v~~~ 150 (478)
.++|.||.-.............++|+|.+.
T Consensus 68 ~~vDgII~~~~~~~~~~~~~~~~iPvV~~~ 97 (302)
T 2qh8_A 68 ENPDVLVGIATPTAQALVSATKTIPIVFTA 97 (302)
T ss_dssp TCCSEEEEESHHHHHHHHHHCSSSCEEEEE
T ss_pred CCCCEEEECChHHHHHHHhcCCCcCEEEEe
Confidence 569999975321111122235689998875
No 368
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=21.39 E-value=4.2e+02 Score=24.72 Aligned_cols=90 Identities=8% Similarity=-0.047 Sum_probs=56.7
Q ss_pred CEEEEEcCCCcc----CHHHHHHHHHHHHhCCCeEEEEeCCchhhhhhhhcCCCCCcchhccccCCCCCeEEEEcCCCCC
Q 011724 10 PHAIAICYPLQG----HVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLP 85 (478)
Q Consensus 10 ~~il~~~~~~~G----H~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 85 (478)
.++++++.++.+ ...-+..+++.|.+.+.+|.+++.....+.++ .. ..++.+..+-
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l~---~~-------------~~~v~~~~~~---- 291 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDISPLG---TL-------------PRNVRAVGWT---- 291 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCCGGGC---SC-------------CTTEEEESSC----
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcChhhhc---cC-------------CCcEEEEccC----
Confidence 457777777763 33446778889988899999988776544443 21 1155554210
Q ss_pred CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHhhccCCCccEEEEcCCchhhHHHHHHcCCccEEE
Q 011724 86 LNFDRSLNHDQFMECLLHVFSAHVDELVGNLIQLNPEMNCLVTDTFFVWSSMIAKKYNLVNISF 149 (478)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~pD~vi~D~~~~~~~~~A~~lgiP~v~~ 149 (478)
. ..+++. ..|++|+.. ......=|-..|+|.|.+
T Consensus 292 -------~---------------~~~ll~-------~ad~~v~~~-G~~t~~Eal~~G~P~v~~ 325 (398)
T 3oti_A 292 -------P---------------LHTLLR-------TCTAVVHHG-GGGTVMTAIDAGIPQLLA 325 (398)
T ss_dssp -------C---------------HHHHHT-------TCSEEEECC-CHHHHHHHHHHTCCEEEC
T ss_pred -------C---------------HHHHHh-------hCCEEEECC-CHHHHHHHHHhCCCEEEc
Confidence 0 112332 279999875 344556677889999986
No 369
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=21.38 E-value=4.9e+02 Score=24.04 Aligned_cols=30 Identities=13% Similarity=0.164 Sum_probs=19.4
Q ss_pred HHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHH
Q 011724 409 EEVSEKINRLMSGKS-SDELRKNIKEVRKKLEN 440 (478)
Q Consensus 409 ~~l~~~v~~ll~~~~-~~~~r~~a~~l~~~~~~ 440 (478)
+.|++++.++- ++ -..|++|++++.+++.+
T Consensus 158 ~~I~~~L~~~D--P~~a~~Y~~Na~~~~~~L~~ 188 (321)
T 1xvl_A 158 ENIRQAFVELD--PDNAKYYNANAAVYSEQLKA 188 (321)
T ss_dssp HHHHHHHHHHC--GGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC--cccHHHHHHHHHHHHHHHHH
Confidence 34444444432 22 35699999999998875
No 370
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=21.34 E-value=85 Score=27.73 Aligned_cols=29 Identities=14% Similarity=0.086 Sum_probs=24.7
Q ss_pred cCcceeeeccCchhhHHHHhcCcceeccCccc
Q 011724 362 SAIGGFLTHCGWNSIQESIWCSVPLLCFPLLT 393 (478)
Q Consensus 362 ~~v~~~ItHGG~~s~~Eal~~GvP~l~~P~~~ 393 (478)
+++ +|+.||.......- .++|+|-++..+
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 566 99999999999876 579999999854
No 371
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=21.19 E-value=82 Score=29.52 Aligned_cols=35 Identities=17% Similarity=0.352 Sum_probs=27.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
++.+|+++-.+..| +.+|..|+++|++|+++-...
T Consensus 5 ~~~dVvVIG~Gi~G-----ls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 5 SQKRVVVLGSGVIG-----LSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCEEEECCCHHH-----HHHHHHHHhCCCEEEEEeccC
Confidence 34789998877555 678889999999999996543
No 372
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=21.08 E-value=1.3e+02 Score=27.66 Aligned_cols=37 Identities=11% Similarity=0.175 Sum_probs=25.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
.+.++|++. |+.|.+- ..|++.|.++||+|+.+.-..
T Consensus 9 ~~~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 45 (342)
T 1y1p_A 9 PEGSLVLVT--GANGFVA--SHVVEQLLEHGYKVRGTARSA 45 (342)
T ss_dssp CTTCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEE--CCccHHH--HHHHHHHHHCCCEEEEEeCCc
Confidence 344677665 3444443 467899999999999887643
No 373
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=21.05 E-value=81 Score=28.26 Aligned_cols=36 Identities=14% Similarity=-0.057 Sum_probs=25.1
Q ss_pred HHHHhhccCCCccEEEEcCCchh-------hHHHHHHcCCccEEEe
Q 011724 112 LVGNLIQLNPEMNCLVTDTFFVW-------SSMIAKKYNLVNISFW 150 (478)
Q Consensus 112 ll~~l~~~~~~pD~vi~D~~~~~-------~~~~A~~lgiP~v~~~ 150 (478)
+++.++ .+||+|++|..... |.-+.-.+++|+|.+.
T Consensus 102 al~~L~---~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 144 (246)
T 3ga2_A 102 AAKKLE---TEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIA 144 (246)
T ss_dssp HHHHCS---SCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred HHHhcC---CCCCEEEEcCcEEecCCCcchhheeeeecCCCEEeee
Confidence 445555 57999999986632 3445566789999984
No 374
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=20.91 E-value=88 Score=27.61 Aligned_cols=36 Identities=11% Similarity=0.166 Sum_probs=24.2
Q ss_pred CCEEEEEcCCCc--cCHHHHHH-HHHHHHhC-CCeEEEEe
Q 011724 9 KPHAIAICYPLQ--GHVIPFVN-LALKLASS-GFTITFVN 44 (478)
Q Consensus 9 ~~~il~~~~~~~--GH~~p~l~-La~~L~~r-Gh~Vt~~~ 44 (478)
||||+++..--. |+..-+.. +++.|.+. |++|.++-
T Consensus 1 MmkIliI~gS~r~~s~T~~la~~i~~~l~~~~g~~v~~~d 40 (242)
T 1sqs_A 1 MNKIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRT 40 (242)
T ss_dssp CCEEEEEECCCCTTCHHHHHHHHHHHHHHHHSCCEEEEEC
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 578877764332 66555554 56777777 99998874
No 375
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=20.90 E-value=59 Score=29.04 Aligned_cols=30 Identities=20% Similarity=0.123 Sum_probs=23.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVN 44 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 44 (478)
|||.|+-.+..|. .+|+.|++.||+|++..
T Consensus 1 M~I~iIG~G~mG~-----~la~~l~~~g~~V~~~~ 30 (264)
T 1i36_A 1 LRVGFIGFGEVAQ-----TLASRLRSRGVEVVTSL 30 (264)
T ss_dssp CEEEEESCSHHHH-----HHHHHHHHTTCEEEECC
T ss_pred CeEEEEechHHHH-----HHHHHHHHCCCeEEEeC
Confidence 5888886655553 57899999999999853
No 376
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=20.75 E-value=1.1e+02 Score=24.13 Aligned_cols=34 Identities=12% Similarity=0.156 Sum_probs=22.0
Q ss_pred CCCEEEEEcCCCccCHH--------HHHHHHHHHHhCCCeEE
Q 011724 8 PKPHAIAICYPLQGHVI--------PFVNLALKLASSGFTIT 41 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~--------p~l~La~~L~~rGh~Vt 41 (478)
-+||.++++.|-.|... .+...|..|.++||.+.
T Consensus 6 ~~M~~IYIagPysg~~~n~~~~n~~~~~r~A~~l~~~G~ip~ 47 (125)
T 1t1j_A 6 GHMRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVF 47 (125)
T ss_dssp -CCCEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhhheeEECCCCCCcchHHHHHHHHHHHHHHHHHHCCCeee
Confidence 45677788878777632 23445666788999654
No 377
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=20.70 E-value=99 Score=28.51 Aligned_cols=33 Identities=15% Similarity=0.262 Sum_probs=23.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNT 45 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 45 (478)
+|+|++.- +.|-+- ..|++.|.++||+|+.+..
T Consensus 5 ~~~vlVTG--atG~iG--~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTG--GAGYIG--SHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp SCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEECC
T ss_pred CcEEEEec--CCcHHH--HHHHHHHHHCCCcEEEEec
Confidence 36766553 334332 4689999999999998864
No 378
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=20.68 E-value=78 Score=29.77 Aligned_cols=36 Identities=6% Similarity=0.214 Sum_probs=25.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCc
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASS-GFTITFVNTHS 47 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~ 47 (478)
+||+|++.- +.|.+- ..|+++|.++ ||+|+.+.-..
T Consensus 23 ~~~~vlVtG--atG~iG--~~l~~~L~~~~g~~V~~~~r~~ 59 (372)
T 3slg_A 23 KAKKVLILG--VNGFIG--HHLSKRILETTDWEVFGMDMQT 59 (372)
T ss_dssp CCCEEEEES--CSSHHH--HHHHHHHHHHSSCEEEEEESCC
T ss_pred CCCEEEEEC--CCChHH--HHHHHHHHhCCCCEEEEEeCCh
Confidence 457777654 444443 4678899888 99999998643
No 379
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=20.60 E-value=3.2e+02 Score=27.51 Aligned_cols=28 Identities=14% Similarity=0.242 Sum_probs=22.7
Q ss_pred ccCcceeeeccCc------hhhHHHHhcCcceeccC
Q 011724 361 HSAIGGFLTHCGW------NSIQESIWCSVPLLCFP 390 (478)
Q Consensus 361 ~~~v~~~ItHGG~------~s~~Eal~~GvP~l~~P 390 (478)
.+.+ +++|.|- +.+.||-+.++|||++-
T Consensus 70 ~pgv--~~~TsGpG~~N~~~gi~~A~~~~vPll~it 103 (564)
T 2q28_A 70 KPGI--CLTVSAPGFLNGLTALANATVNGFPMIMIS 103 (564)
T ss_dssp SCEE--EEECSHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCEE--EEEccCchHHHHHHHHHHHHhcCCCEEEEe
Confidence 3445 8999986 47789999999999984
No 380
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=20.40 E-value=66 Score=30.10 Aligned_cols=35 Identities=20% Similarity=0.341 Sum_probs=26.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 8 PKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 8 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
+++||.|+-.+..| .++|..|+++||+|+++-...
T Consensus 5 ~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 5 AAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSCH
T ss_pred CCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCCH
Confidence 46899999776666 478999999999999986543
No 381
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=20.35 E-value=87 Score=26.74 Aligned_cols=37 Identities=8% Similarity=0.189 Sum_probs=23.4
Q ss_pred CCEEEEEc-CCC---ccCHHHHHH-HHHHHHhCC--CeEEEEeC
Q 011724 9 KPHAIAIC-YPL---QGHVIPFVN-LALKLASSG--FTITFVNT 45 (478)
Q Consensus 9 ~~~il~~~-~~~---~GH~~p~l~-La~~L~~rG--h~Vt~~~~ 45 (478)
||||+++. .+- .|+..-+.. +++.|.++| ++|.++--
T Consensus 1 M~kilii~gS~r~~~~s~t~~la~~~~~~~~~~g~~~~v~~~dL 44 (208)
T 2hpv_A 1 MSKLLVVKAHPLTKEESRSVRALETFLASYRETNPSDEIEILDV 44 (208)
T ss_dssp -CEEEEEECCSSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEET
T ss_pred CCeEEEEEecCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEeeC
Confidence 57886665 443 366655544 577777776 99888753
No 382
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=20.31 E-value=58 Score=30.76 Aligned_cols=34 Identities=26% Similarity=0.350 Sum_probs=27.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
..+|+++-.+..| +.+|..|+++|++|+++-...
T Consensus 5 ~~dVvIIGgGi~G-----l~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVG-----VTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSSS
T ss_pred cCCEEEECCCHHH-----HHHHHHHHHCCCeEEEEeCCC
Confidence 4678888766555 778999999999999997654
No 383
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=20.31 E-value=3.4e+02 Score=24.64 Aligned_cols=39 Identities=10% Similarity=0.042 Sum_probs=27.9
Q ss_pred HHHHHHhhccCCCccEEEEcCCc--hhhHHHHHHcCCccEEEe
Q 011724 110 DELVGNLIQLNPEMNCLVTDTFF--VWSSMIAKKYNLVNISFW 150 (478)
Q Consensus 110 ~~ll~~l~~~~~~pD~vi~D~~~--~~~~~~A~~lgiP~v~~~ 150 (478)
.++++.+++ .+..+|+++... -.+-.+|+..|++++.+.
T Consensus 218 ~~l~~~ik~--~~v~~if~e~~~~~~~~~~la~~~g~~v~~l~ 258 (286)
T 3gi1_A 218 KEIQDFVKE--YNVKTIFAEDNVNPKIAHAIAKSTGAKVKTLS 258 (286)
T ss_dssp HHHHHHHHH--TTCCEEEECTTSCTHHHHHHHHTTTCEEEECC
T ss_pred HHHHHHHHH--cCCCEEEEeCCCChHHHHHHHHHhCCeEEEec
Confidence 344444544 579999999865 345678999999988763
No 384
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=20.22 E-value=1e+02 Score=28.63 Aligned_cols=36 Identities=25% Similarity=0.271 Sum_probs=24.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011724 7 KPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTH 46 (478)
Q Consensus 7 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 46 (478)
.++|+|++.- +.|-+- ..|++.|.++||+|+.+...
T Consensus 25 ~~~~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 25 KDRKRILITG--GAGFVG--SHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp --CCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred cCCCEEEEEc--CccHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 3457776653 444332 46789999999999998753
No 385
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=20.15 E-value=98 Score=24.20 Aligned_cols=32 Identities=6% Similarity=0.083 Sum_probs=21.2
Q ss_pred CCccEEEEcCCch--hhHHHHHHc---------CCccEEEecc
Q 011724 121 PEMNCLVTDTFFV--WSSMIAKKY---------NLVNISFWTE 152 (478)
Q Consensus 121 ~~pD~vi~D~~~~--~~~~~A~~l---------giP~v~~~~~ 152 (478)
.+||+||.|...+ .+..+++.+ .+|.+.++..
T Consensus 57 ~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 57 EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 4699999997553 355554443 2788887654
No 386
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=20.15 E-value=1.4e+02 Score=27.38 Aligned_cols=42 Identities=14% Similarity=0.176 Sum_probs=29.6
Q ss_pred CCCCEEEEEcCCCc--cCHH-HHHHHHHHHHhCCCeEEEEeCCch
Q 011724 7 KPKPHAIAICYPLQ--GHVI-PFVNLALKLASSGFTITFVNTHSI 48 (478)
Q Consensus 7 ~~~~~il~~~~~~~--GH~~-p~l~La~~L~~rGh~Vt~~~~~~~ 48 (478)
.+|+|++++..|.. |... -.-.+...|.++|+++++..+...
T Consensus 6 ~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~ 50 (304)
T 3s40_A 6 TKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQ 50 (304)
T ss_dssp CSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCST
T ss_pred CCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCc
Confidence 45688888887754 4432 344677888889999998876543
No 387
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=20.12 E-value=1.1e+02 Score=25.71 Aligned_cols=38 Identities=13% Similarity=-0.088 Sum_probs=27.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCc
Q 011724 9 KPHAIAICYPLQGHVIPFVNLALKLAS-SGFTITFVNTHS 47 (478)
Q Consensus 9 ~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~ 47 (478)
|+||+|+.+++..... +....+.|.+ .|++|++++...
T Consensus 1 m~~i~ill~~g~~~~e-~~~~~~~l~~a~~~~v~~vs~~~ 39 (188)
T 2fex_A 1 MTRIAIALAQDFADWE-PALLAAAARSYLGVEIVHATPDG 39 (188)
T ss_dssp CCEEEEECCTTBCTTS-SHHHHHHHHHHSCCEEEEEETTS
T ss_pred CcEEEEEeCCCchHHH-HHHHHHHHhhcCCceEEEEeCCC
Confidence 5789999888765433 2234567777 999999999765
No 388
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=20.11 E-value=96 Score=26.84 Aligned_cols=35 Identities=14% Similarity=0.121 Sum_probs=23.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 011724 10 PHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHS 47 (478)
Q Consensus 10 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 47 (478)
.|.++++. +.|-+ -..+++.|+++||+|+++....
T Consensus 5 ~k~vlVtG-asggi--G~~~a~~l~~~G~~V~~~~r~~ 39 (234)
T 2ehd_A 5 KGAVLITG-ASRGI--GEATARLLHAKGYRVGLMARDE 39 (234)
T ss_dssp CCEEEESS-TTSHH--HHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEEC-CCcHH--HHHHHHHHHHCCCEEEEEECCH
Confidence 45555663 33433 2578999999999999887643
No 389
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=20.10 E-value=74 Score=29.08 Aligned_cols=45 Identities=9% Similarity=0.044 Sum_probs=32.5
Q ss_pred CCEEEEEcCCCcc-C---HHHHHHHHHHHHhCCCeEEEEeCCchhhhhh
Q 011724 9 KPHAIAICYPLQG-H---VIPFVNLALKLASSGFTITFVNTHSIHHQIT 53 (478)
Q Consensus 9 ~~~il~~~~~~~G-H---~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 53 (478)
+|||+++..+..+ | +.....++++|.++||+|..+........+.
T Consensus 3 ~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~~~~ 51 (307)
T 3r5x_A 3 AMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKMDLIE 51 (307)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECSSGGGHHH
T ss_pred CcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEcccCchhHHH
Confidence 4899998854322 2 3445678999999999999998876555444
Done!