Query 011725
Match_columns 478
No_of_seqs 140 out of 1364
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 14:04:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011725.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011725hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rtk_A 60 kDa chaperonin 2; he 100.0 2E-104 6E-109 851.1 38.8 452 5-465 52-518 (546)
2 1kp8_A Groel protein; chaperon 100.0 5E-103 2E-107 841.4 43.1 454 5-465 52-520 (547)
3 1we3_A CPN60(groel); chaperoni 100.0 6E-102 2E-106 833.9 45.6 454 5-465 52-522 (543)
4 1iok_A Chaperonin 60; chaperon 100.0 6E-103 2E-107 841.5 35.5 455 5-465 53-522 (545)
5 3p9d_C T-complex protein 1 sub 100.0 8.5E-88 2.9E-92 728.4 30.0 435 5-470 61-588 (590)
6 3iyg_H T-complex protein 1 sub 100.0 8.8E-86 3E-90 705.6 40.6 406 5-468 53-514 (515)
7 3ruv_A Chaperonin, CPN; double 100.0 1.4E-85 4.7E-90 708.2 38.1 400 5-465 61-516 (543)
8 3ko1_A Chaperonin; 9-fold symm 100.0 1.3E-85 4.5E-90 708.8 37.4 401 5-466 72-531 (553)
9 3iyg_B T-complex protein 1 sub 100.0 9.2E-85 3.2E-89 697.8 41.1 400 5-466 54-509 (513)
10 3aq1_B Thermosome subunit; gro 100.0 3.5E-85 1.2E-89 699.1 36.2 400 5-465 15-473 (500)
11 3p9d_A T-complex protein 1 sub 100.0 1.1E-85 3.9E-90 710.6 32.3 405 5-465 66-545 (559)
12 3iyg_A T-complex protein 1 sub 100.0 1.6E-84 5.6E-89 698.2 39.3 405 5-465 52-525 (529)
13 3iyg_E T-complex protein 1 sub 100.0 3.7E-84 1.3E-88 693.8 40.9 408 5-466 52-513 (515)
14 3p9d_D T-complex protein 1 sub 100.0 3.1E-85 1.1E-89 703.3 30.6 404 5-465 61-525 (528)
15 1q3q_A Thermosome alpha subuni 100.0 2.3E-84 7.9E-89 699.3 36.7 401 5-466 65-523 (548)
16 1a6d_A Thermosome (alpha subun 100.0 2.2E-84 7.5E-89 699.1 36.2 400 5-466 64-520 (545)
17 3iyg_D T-complex protein 1 sub 100.0 9.2E-84 3.2E-88 690.8 39.1 400 5-465 53-515 (518)
18 1a6d_B Thermosome (beta subuni 100.0 3.8E-84 1.3E-88 697.3 36.1 401 5-466 63-521 (543)
19 3iyg_G T-complex protein 1 sub 100.0 5.2E-83 1.8E-87 684.5 41.0 403 5-468 51-514 (515)
20 3iyg_Q T-complex protein 1 sub 100.0 4.8E-83 1.6E-87 684.7 40.2 406 5-465 53-509 (512)
21 3p9d_E T-complex protein 1 sub 100.0 5.7E-84 2E-88 697.7 32.3 410 5-469 87-559 (562)
22 3iyg_Z T-complex protein 1 sub 100.0 1.4E-82 4.9E-87 681.0 38.7 401 5-467 52-516 (517)
23 3p9d_G T-complex protein 1 sub 100.0 4E-84 1.4E-88 697.3 25.9 403 5-466 66-525 (550)
24 3p9d_B T-complex protein 1 sub 100.0 8.8E-84 3E-88 692.6 26.7 400 5-466 60-516 (527)
25 3p9d_F T-complex protein 1 sub 100.0 2.1E-82 7.2E-87 684.2 27.3 406 5-471 59-540 (546)
26 3p9d_H T-complex protein 1 sub 100.0 3.3E-81 1.1E-85 677.0 24.0 401 5-466 68-546 (568)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 5.1E-50 1.8E-54 367.6 13.5 189 140-328 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 1.9E-48 6.5E-53 357.9 15.4 185 143-327 12-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 6.3E-39 2.2E-43 281.5 14.5 144 145-288 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 8.1E-23 2.8E-27 189.5 13.0 144 139-336 3-174 (178)
31 1ass_A Thermosome; chaperonin, 99.8 5.8E-19 2E-23 160.6 13.0 127 143-292 1-154 (159)
No 1
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1.7e-104 Score=851.06 Aligned_cols=452 Identities=31% Similarity=0.462 Sum_probs=416.8
Q ss_pred HHHHhhhccccCcc----cccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINTT----GTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADA 79 (478)
Q Consensus 5 ~~~il~~~~~~~p~----~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~-gi~P~~I~~G~~~A~~~ 79 (478)
..||||+|+++||+ ||++ +++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.
T Consensus 52 G~TIlk~i~v~hp~~n~gAkll------~e~a~~qd~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~ 125 (546)
T 3rtk_A 52 GVSIAKEIELEDPYEKIGAELV------KEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEK 125 (546)
T ss_dssp ---------CCCHHHHHHHHHH------HHHHTSCC-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCChhhhHHHHHH------HHHHHhhhhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 46899999999999 7777 5788999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhccCcceeeecCCcccceeEEEeeEEEeecccCCcccc
Q 011725 80 VVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFT 159 (478)
Q Consensus 80 ~~~~L~~~s~~v~~~~~l~~vA~~s~~~~~~~~~li~~A~~~vg~~~~I~i~~g~~~~~~~~l~~G~~~~~g~~~~~~~~ 159 (478)
++++|+++++|+++.++|.+||++|++ ++.+++++++|+.+++.+|.|+|+.+++..+++++++||+|+++|.||||++
T Consensus 126 a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~~liadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt 204 (546)
T 3rtk_A 126 VTETLLKGAKEVETKEQIAATAAISAG-DQSIGDLIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVT 204 (546)
T ss_dssp HHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCS
T ss_pred HHHHHHHhcccCCChHHHHhHeEEeCC-chHHHHHHHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCccccc
Confidence 999999999999999999999999998 8899999999999999999999998877778899999999999999999999
Q ss_pred ccccceeeecCcEEEEeccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcchhhh
Q 011725 160 HKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRK 239 (478)
Q Consensus 160 ~~~~~~~~l~~p~Il~~d~~i~~~~~i~~~le~i~~~g~~lvIi~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk 239 (478)
+|++|+.+++||+|+++|++|+++++++++++++.++|+||||++++|+++++++|+.|+++|.+++++||+|+||+.|+
T Consensus 205 ~~e~m~~~len~kIll~d~kIs~~~~l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk 284 (546)
T 3rtk_A 205 DPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRK 284 (546)
T ss_dssp BTTTTBEEEESCEEEEBSSEECCSTTTHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHH
T ss_pred CcccCeeEecccEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccccceEEEeCceEEEEcCCCChhhHHHHHHHHHHHhhhccc----HHHH
Q 011725 240 AIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLK 315 (478)
Q Consensus 240 ~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~a~~v~i~~~~~~~i~g~~~~~~i~~r~~~l~~~l~~~~s----~~l~ 315 (478)
++|+|||++|||++++++.|++++++++++||+|++|++++++++|++||+++++++.|+++|++++++++| ++|+
T Consensus 285 ~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~ 364 (546)
T 3rtk_A 285 AMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQ 364 (546)
T ss_dssp HHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHH
T ss_pred hhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999988 9999
Q ss_pred HHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhcCcccChhHHHHHHHHHHHhhcCCChhHHHHHHHHHHH
Q 011725 316 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNA 395 (478)
Q Consensus 316 eRla~l~g~~atI~vrG~t~~~l~E~er~l~DAl~~~k~a~~~giVpGGGa~el~~s~~L~~~~~~~~~e~~gi~~~a~A 395 (478)
|||++|+|++|||+|||+|+++++|+||++|||||++|+++++|+|||||++|+++|.+|++|+ .++++|+|+++|++|
T Consensus 365 erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~giVpGGGa~e~~~s~~L~~~~-~~g~eq~~i~~~a~A 443 (546)
T 3rtk_A 365 ERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAAPTLDELK-LEGDEATGANIVKVA 443 (546)
T ss_dssp HHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHTTGGGSTTSC-CCTTHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCCcccCCcHHHHHHHHHHHHhc-cccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999988 789999999999999
Q ss_pred HHHHHHHHHHhcCCChHHH-HHHHhcCCCCeeEeCCCCcccccccCCcccchHhHHHHHHhhh-----Hhhhcccc
Q 011725 396 LKMAAYLIASNAGVDGSVI-DKLLEQDSSDLGYNPARGLYVQVWGCRSTETCTIRICKGHKYD-----FIEECNLV 465 (478)
Q Consensus 396 L~~ip~~La~NAG~d~~~i-~kl~~~~~~~~Gid~~~g~~~dm~~~gI~Dp~~Vk~~~~~~~~-----~~~~~~~~ 465 (478)
|+.||++||+|||+|+.++ .+|++. ..++|||+.+|++.||++.|||||++||++++..++ +|+++.+|
T Consensus 444 Le~ip~~La~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~id~iI 518 (546)
T 3rtk_A 444 LEAPLKQIAFNSGLEPGVVAEKVRNL-PAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAVV 518 (546)
T ss_dssp TTHHHHHHHTTTTCCHHHHHHHHHHS-CTTEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHhh-cCCEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 999885 345999999999999999999999999998876554 66677766
No 2
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=5.1e-103 Score=841.39 Aligned_cols=454 Identities=33% Similarity=0.474 Sum_probs=436.5
Q ss_pred HHHHhhhccccCc----ccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINT----TGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADA 79 (478)
Q Consensus 5 ~~~il~~~~~~~p----~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~-gi~P~~I~~G~~~A~~~ 79 (478)
..||||+|+++|| .||++ +++|++||+++||||||+||||++||+++++++. |+||+.|++||++|++.
T Consensus 52 G~tIlk~i~~~hp~en~~Akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~ 125 (547)
T 1kp8_A 52 GVSVAREIELEDKFENMGAQMV------KEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTV 125 (547)
T ss_dssp HHHHHHHCCCSSHHHHHHHHHH------HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccccChhhhHHHHHH------HHHHHhhccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 4699999999999 99998 4788999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhccCcceeeecCCcccceeEEEeeEEEeecccCCcccc
Q 011725 80 VVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFT 159 (478)
Q Consensus 80 ~~~~L~~~s~~v~~~~~l~~vA~~s~~~~~~~~~li~~A~~~vg~~~~I~i~~g~~~~~~~~l~~G~~~~~g~~~~~~~~ 159 (478)
++++|+++++|+++.++|.++|++|++++++|++++++|+.+++++|.|+|++|+++.+++++++||+|+++|.||||++
T Consensus 126 a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~liadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt 205 (547)
T 1kp8_A 126 AVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFIN 205 (547)
T ss_dssp HHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCS
T ss_pred HHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHHHHHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCcccccccc
Confidence 99999999999999999999999999889999999999999999999999999999987679999999999999999999
Q ss_pred ccccceeeecCcEEEEeccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcchhhh
Q 011725 160 HKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRK 239 (478)
Q Consensus 160 ~~~~~~~~l~~p~Il~~d~~i~~~~~i~~~le~i~~~g~~lvIi~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk 239 (478)
+|++|+.+++||+|+++|++|+++++++++++++.++|+||||++++|+++++++|+.|+++|.++|+|||.|+||+.|+
T Consensus 206 ~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk 285 (547)
T 1kp8_A 206 KPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRK 285 (547)
T ss_dssp BTTTTBEEEESCEEECEESEECCGGGTHHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHH
T ss_pred CcccCceEecCceEEEEcCcCCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccccceEEEeCceEEEEcCCCChhhHHHHHHHHHHHhhhccc----HHHH
Q 011725 240 AIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLK 315 (478)
Q Consensus 240 ~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~a~~v~i~~~~~~~i~g~~~~~~i~~r~~~l~~~l~~~~s----~~l~ 315 (478)
++|+|||++|||++++++.|++++++++++||+|++|++++++|+|++||++++++++|+++|+.+++.++| |+|+
T Consensus 286 ~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~ 365 (547)
T 1kp8_A 286 AMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQ 365 (547)
T ss_dssp HHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHH
T ss_pred HHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHH
Confidence 999999999999999998888999999999999999999999999999999999999999999999999988 9999
Q ss_pred HHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhcCcccChhHHHHHHHHHHHhhcCCChhHHHHHHHHHHH
Q 011725 316 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNA 395 (478)
Q Consensus 316 eRla~l~g~~atI~vrG~t~~~l~E~er~l~DAl~~~k~a~~~giVpGGGa~el~~s~~L~~~~~~~~~e~~gi~~~a~A 395 (478)
|||++|+|++|||+|||+|+++++|+||++|||||++|+++++|+|||||++|+++|.+|++++..++++|+|+++|++|
T Consensus 366 erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~A 445 (547)
T 1kp8_A 366 ERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNADQNVGIKVALRA 445 (547)
T ss_dssp HHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHTTTCCCSSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCCEEeCCcHHHHHHHHHHHHHhccCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999876689999999999999
Q ss_pred HHHHHHHHHHhcCCChHHH-HHHHhcCCCCeeEeCCCCcccccccCCcccchHhHHHHHHhhh-----Hhhhcccc
Q 011725 396 LKMAAYLIASNAGVDGSVI-DKLLEQDSSDLGYNPARGLYVQVWGCRSTETCTIRICKGHKYD-----FIEECNLV 465 (478)
Q Consensus 396 L~~ip~~La~NAG~d~~~i-~kl~~~~~~~~Gid~~~g~~~dm~~~gI~Dp~~Vk~~~~~~~~-----~~~~~~~~ 465 (478)
|+.||++||+|||+|+.++ .+|++. +.++|||+.+|++.||++.|||||++||++++..+. +|+++.+|
T Consensus 446 Le~ip~~la~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~id~iI 520 (547)
T 1kp8_A 446 MEAPLRQIVLNCGEEPSVVANTVKGG-DGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMV 520 (547)
T ss_dssp TTHHHHHHHHHHTSCHHHHHHHHHHS-CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHhc-CCCEeEeCCCCccccchhcCceechHhHHHHHHHHHHHHHHHHhHhhee
Confidence 9999999999999999999 999875 568999999999999999999999999998776664 55566666
No 3
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=5.8e-102 Score=833.87 Aligned_cols=454 Identities=33% Similarity=0.495 Sum_probs=436.2
Q ss_pred HHHHhhhccccCc----ccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINT----TGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADA 79 (478)
Q Consensus 5 ~~~il~~~~~~~p----~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~-gi~P~~I~~G~~~A~~~ 79 (478)
..||||+|+++|| +||++ +++|++||+++||||||+||||++||+++++++. |+||+.|++||++|++.
T Consensus 52 G~tIlk~i~~~hp~en~~Akll------~e~a~~qd~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~ 125 (543)
T 1we3_A 52 GVTVAKEVELEDHLENIGAQLL------KEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEA 125 (543)
T ss_dssp HHHHHHHCCCSSHHHHHHHHHH------HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccCChHHhHHHHHH------HHHHHhhheecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 4699999999999 99998 4788999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhccCcceeeecCCcccceeEEEeeEEEeecccCCcccc
Q 011725 80 VVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFT 159 (478)
Q Consensus 80 ~~~~L~~~s~~v~~~~~l~~vA~~s~~~~~~~~~li~~A~~~vg~~~~I~i~~g~~~~~~~~l~~G~~~~~g~~~~~~~~ 159 (478)
+++.|+++++|+++.++|.+||++|++ +++|++++++|+.+++++|.|+|++|+++.+++++++||+|++||.||||++
T Consensus 126 a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt 204 (543)
T 1we3_A 126 AVEKIKALAIPVEDRKAIEEVATISAN-DPEVGKLIADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVT 204 (543)
T ss_dssp HHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCS
T ss_pred HHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHHHHHHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCcccccccc
Confidence 999999999999999999999999998 8999999999999999999999999999987779999999999999999999
Q ss_pred ccccceeeecCcEEEEeccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcchhhh
Q 011725 160 HKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRK 239 (478)
Q Consensus 160 ~~~~~~~~l~~p~Il~~d~~i~~~~~i~~~le~i~~~g~~lvIi~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk 239 (478)
+|++|+.+++||+|+++|++|+++++++++++++.++|+||||++++|+++++++|+.|+++|.++|+|||.|+||+.|+
T Consensus 205 ~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~ 284 (543)
T 1we3_A 205 NPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRK 284 (543)
T ss_dssp BTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHH
T ss_pred CcccCceeecCceEEEECCCcCCHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccccceEEEeCceEEEEcCCCChhhHHHHHHHHHHHhhhccc----HHHH
Q 011725 240 AIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLK 315 (478)
Q Consensus 240 ~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~a~~v~i~~~~~~~i~g~~~~~~i~~r~~~l~~~l~~~~s----~~l~ 315 (478)
++|+|||++|||++++++.|++++++++++||+|++|++++++++|++||++++++++|+++|+.+++.++| ++|+
T Consensus 285 ~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~ 364 (543)
T 1we3_A 285 EMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQ 364 (543)
T ss_dssp HHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHH
T ss_pred HHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999988 9999
Q ss_pred HHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhcCcccChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHH
Q 011725 316 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQN 394 (478)
Q Consensus 316 eRla~l~g~~atI~vrG~t~~~l~E~er~l~DAl~~~k~a~~~giVpGGGa~el~~s~~L~~~~~~-~~~e~~gi~~~a~ 394 (478)
|||++|+|++|||+|||+|+++++|+||++|||||++|+++++|+|||||++|+++|.+|++++.. ++++|+|+++|++
T Consensus 365 erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ 444 (543)
T 1we3_A 365 ERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDEATGAKIVRR 444 (543)
T ss_dssp HHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCccHHHHHHHHHHHHHhhccCchHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999875 8999999999999
Q ss_pred HHHHHHHHHHHhcCCChHHH-HHHHhc-CCCCeeEeCCCCcccccccCCcccchHhHHHHHHhhh-----Hhhhcccc
Q 011725 395 ALKMAAYLIASNAGVDGSVI-DKLLEQ-DSSDLGYNPARGLYVQVWGCRSTETCTIRICKGHKYD-----FIEECNLV 465 (478)
Q Consensus 395 AL~~ip~~La~NAG~d~~~i-~kl~~~-~~~~~Gid~~~g~~~dm~~~gI~Dp~~Vk~~~~~~~~-----~~~~~~~~ 465 (478)
||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|++.||++.|||||++||++++..+. +|+++.+|
T Consensus 445 ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI 522 (543)
T 1we3_A 445 ALEEPARQIAENAGYEGSVIVQQILAETKNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVV 522 (543)
T ss_dssp HTTHHHHHHHHHHTSCHHHHHHHHHHCCSCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHhcCCCCEEEeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999 999873 3568999999999999999999999999998776654 56677776
No 4
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=5.5e-103 Score=841.46 Aligned_cols=455 Identities=34% Similarity=0.501 Sum_probs=394.8
Q ss_pred HHHHhhhccccCc----ccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINT----TGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADA 79 (478)
Q Consensus 5 ~~~il~~~~~~~p----~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~-gi~P~~I~~G~~~A~~~ 79 (478)
..||||+|+++|| +||++ +++|++||+++||||||+||||++||+++++++. |+||+.|++||++|++.
T Consensus 53 G~tIlk~i~~~hp~en~~Akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~ 126 (545)
T 1iok_A 53 GVSVAKEIELSDKFENMGAQMV------REVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAK 126 (545)
T ss_dssp HHHHHHHCCCSSHHHHHHHHHH------HHHHHHGGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCChhhHHHHHHH------HHHHHhhccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 4699999999999 99998 4788999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhccCcceeeecCCcccceeEEEeeEEEeecccCCcccc
Q 011725 80 VVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFT 159 (478)
Q Consensus 80 ~~~~L~~~s~~v~~~~~l~~vA~~s~~~~~~~~~li~~A~~~vg~~~~I~i~~g~~~~~~~~l~~G~~~~~g~~~~~~~~ 159 (478)
+++.|+++++|+++.++|.++|++|++++++|++++++|+.+++++|.|+|++|+++.+++++++||+|+++|.||||++
T Consensus 127 a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt 206 (545)
T 1iok_A 127 VVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVT 206 (545)
T ss_dssp HHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHHHHHHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCC
T ss_pred HHHHHHHhcccCCCHHHHHHHHHhhcCCchhHHHHHHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCcccccccc
Confidence 99999999999988889999999999889999999999999999999999999999987679999999999999999999
Q ss_pred ccccceeeecCcEEEEeccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcchhhh
Q 011725 160 HKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRK 239 (478)
Q Consensus 160 ~~~~~~~~l~~p~Il~~d~~i~~~~~i~~~le~i~~~g~~lvIi~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk 239 (478)
+|++|+.+++||+|+++|++|+++++++++++++.++|+||||++++|+++++++|+.|+++|.++|+|||.|+||+.|+
T Consensus 207 ~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~ 286 (545)
T 1iok_A 207 NADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRK 286 (545)
T ss_dssp CSSSSCEEEEEEEEEECSSCBCCCCC-----------CCCCEEEESCBC-----------------CEEEECSCCTTHHH
T ss_pred CcccCceeecCCeEEEEcCCcCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccccceEEEeCceEEEEcCCCChhhHHHHHHHHHHHhhhccc----HHHH
Q 011725 240 AIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLK 315 (478)
Q Consensus 240 ~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~a~~v~i~~~~~~~i~g~~~~~~i~~r~~~l~~~l~~~~s----~~l~ 315 (478)
++|+|||++|||++++++.|++++++++++||+|++|++++++|+|++||++++++++|+++++.+++.++| ++|+
T Consensus 287 ~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~ 366 (545)
T 1iok_A 287 AMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQ 366 (545)
T ss_dssp HHHHHHHHHHTC---------------CTTSEEEEEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHH
T ss_pred HHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999888 9999
Q ss_pred HHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhcCcccChhHHHHHHHHHHHhhcCCChhHHHHHHHHHHH
Q 011725 316 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNA 395 (478)
Q Consensus 316 eRla~l~g~~atI~vrG~t~~~l~E~er~l~DAl~~~k~a~~~giVpGGGa~el~~s~~L~~~~~~~~~e~~gi~~~a~A 395 (478)
|||++|+|++|||+|||+|+++++|+||++|||||++|+++++|+|||||++|+++|.+|++++..++++|+|+++|++|
T Consensus 367 erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~A 446 (545)
T 1iok_A 367 ERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRA 446 (545)
T ss_dssp HHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHGGGGGSCCCSSHHHHHHHHHHHHH
T ss_pred HHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHhccCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999876689999999999999
Q ss_pred HHHHHHHHHHhcCCChHHH-HHHHhcCCCCeeEeCCCCcccccccCCcccchHhHHHHHHhhh-----Hhhhcccc
Q 011725 396 LKMAAYLIASNAGVDGSVI-DKLLEQDSSDLGYNPARGLYVQVWGCRSTETCTIRICKGHKYD-----FIEECNLV 465 (478)
Q Consensus 396 L~~ip~~La~NAG~d~~~i-~kl~~~~~~~~Gid~~~g~~~dm~~~gI~Dp~~Vk~~~~~~~~-----~~~~~~~~ 465 (478)
|+.||++||+|||+|+.++ .+|++..++++|||+.+|++.||++.|||||++||++++..+. +|+++.+|
T Consensus 447 Le~ip~~La~NaG~d~~~vv~~l~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~id~iI 522 (545)
T 1iok_A 447 LEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMI 522 (545)
T ss_dssp TTHHHHHHHHHHTSCHHHHHHHHHSCCSTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHhhcCCCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhHHHhh
Confidence 9999999999999999999 9998754578999999999999999999999999998776664 55576666
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=8.5e-88 Score=728.39 Aligned_cols=435 Identities=12% Similarity=0.132 Sum_probs=358.2
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhh-cC-CCChHHHHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKA-LG-RANLTGLTQGFRMAADAVVR 82 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~l-i~-gi~P~~I~~G~~~A~~~~~~ 82 (478)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|+++ +. |+||+.|++||++|++.+++
T Consensus 61 G~TIlk~i~~~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~ 134 (590)
T 3p9d_C 61 GHAILREIDVAHPAAKSM------LELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALE 134 (590)
T ss_dssp HHHHHHHSCCCCHHHHTH------HHHTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCHHHHHH------HHHHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 47789999999999999999999999999999 99 99999999999999999999
Q ss_pred HHhccccccC--CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccCcc----------------eeee--cCCcc
Q 011725 83 NLDCQARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWENDL----------------ITIF--DRKAL 136 (478)
Q Consensus 83 ~L~~~s~~v~--~~~~l~~vA~~s~~------~~~~~~~li~~A~~~vg~~~~----------------I~i~--~g~~~ 136 (478)
+|+++++|++ +.+.|.++|+||++ ++++|++++++|+.++++++. |+|+ .|+++
T Consensus 135 ~L~~~s~~v~~~~~e~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~ 214 (590)
T 3p9d_C 135 VIKQVSKPVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDV 214 (590)
T ss_dssp HHHHHCCTTTTCCTHHHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCG
T ss_pred HHHHHhhccccCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCc
Confidence 9999999986 36889999988754 367899999999999987642 3444 48777
Q ss_pred cceeEEEeeEEEeecccCCccccccccceeeecCcEEEEeccc-------------cCCHHHHHHHH-----------HH
Q 011725 137 YNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVIRQAS-----------LP 192 (478)
Q Consensus 137 ~~~~~l~~G~~~~~g~~~~~~~~~~~~~~~~l~~p~Il~~d~~-------------i~~~~~i~~~l-----------e~ 192 (478)
. ++++++||+|++++.+|.| +.+++||+|+++|++ |++++++.+++ ++
T Consensus 215 ~-ds~lv~Gmvfdk~~~~~~m-------~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vek 286 (590)
T 3p9d_C 215 L-DSRVLKGVLLNKDVVHPKM-------SRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQ 286 (590)
T ss_dssp G-GCBCCSSEEECCCCSCTTS-------CSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred c-cceeeeEEEEecccCCCCC-------cceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4 6899999999999888754 447999999999984 45566666554 67
Q ss_pred HHhcCCCEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccc
Q 011725 193 CMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS 272 (478)
Q Consensus 193 i~~~g~~lvIi~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~ 272 (478)
+.+.|.+|||+.++|+++++++|..|+ |++++++ ++++|+|||++|||+++++ ++++++++||+
T Consensus 287 I~~~g~~vII~e~~I~d~Al~~L~k~~------I~av~~~-----~k~~le~ia~~TGa~iis~-----l~~~~~~~LG~ 350 (590)
T 3p9d_C 287 ILAVRPTLVITEKGVSDLAQHYLLKGG------CSVLRRV-----KKSDNNRIARVTGATIVNR-----VEDLKESDVGT 350 (590)
T ss_dssp HHTTCCSEECCSSCCCTHHHHHHHHTT------CCCCCCC-----CHHHHHHHHHHHTCCCCSC-----STTCCTTSCBC
T ss_pred HHhcCCcEEEecCCcCHHHHHHHHhcc------ceeeccC-----CHHHHHHHHHHhCCceeec-----ccCCCHHHhCC
Confidence 888986666666779999999999764 6677665 7889999999999999996 89999999999
Q ss_pred -cceEE---EeCceEEEEcCCCChhh--------------------------HHHHHHHHHHHhhhcccHHHHHHHhhhc
Q 011725 273 -CKRVI---ATMDNVVIIGGSGELVD--------------------------IQERCEQLRSTIKLSTSDKLKDRLAKLS 322 (478)
Q Consensus 273 -a~~v~---i~~~~~~~i~g~~~~~~--------------------------i~~r~~~l~~~l~~~~s~~l~eRla~l~ 322 (478)
|++|+ +++++|+||+||+++++ |++|+++|+++++.++|+-- +++++|+
T Consensus 351 ~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~-~~~~~l~ 429 (590)
T 3p9d_C 351 NCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHH-HHHHHGS 429 (590)
T ss_dssp CCSEEECCEETTEECEEECC----------------------------------------------------------CC
T ss_pred cCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHH-HHHHhhc
Confidence 99996 68999999999999988 99999999999998887332 5579999
Q ss_pred CCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhc-CcccChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHH
Q 011725 323 GGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAA 400 (478)
Q Consensus 323 g~~atI~vrG~t~~~l~E~er~l~DAl~~~k~a~~~-giVpGGGa~el~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~ip 400 (478)
|++|||+|||+|+++++|+||++|||||++|+++++ |+|||||++|+++|.+|++|+.. ++++|+|+++|++||+.||
T Consensus 430 ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip 509 (590)
T 3p9d_C 430 GKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQWPYQAVADAMECIP 509 (590)
T ss_dssp CSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTHHHHHHHHHHTTHHH
T ss_pred CCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 59999999999999999998764 8999999999999999999
Q ss_pred HHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCcccccccCCcccchHhHHHHHHhhh-----HhhhcccccCCCc
Q 011725 401 YLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGLYVQVWGCRSTETCTIRICKGHKYD-----FIEECNLVHGGSS 470 (478)
Q Consensus 401 ~~La~NAG~d~~~i-~kl~~~---~~~~~Gid~~~g~~~dm~~~gI~Dp~~Vk~~~~~~~~-----~~~~~~~~~~~~~ 470 (478)
++||+|||+|+.++ .+|++. +++++|||+.+|++.||++.|||||++||++++..++ +|+++.+|.+.+.
T Consensus 510 ~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~ 588 (590)
T 3p9d_C 510 RTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGVRK 588 (590)
T ss_dssp HHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSEEEEECCCC-
T ss_pred HHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999 999873 4678999999999999999999999999998877554 6678888876654
No 6
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=8.8e-86 Score=705.62 Aligned_cols=406 Identities=13% Similarity=0.136 Sum_probs=364.3
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~-gi~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++
T Consensus 53 G~tIlk~i~v~hP~Akll------~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 126 (515)
T 3iyg_H 53 GATILKLLDVVHPAAKTL------VDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNK 126 (515)
T ss_pred HHHHHHHccCCCHHHHHH------HHHHHHhhceeCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4778999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--C----HHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC---cceeee--cCCcccceeEEEeeE
Q 011725 84 LDCQARKIT--T----FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---DLITIF--DRKALYNELNFVKGM 146 (478)
Q Consensus 84 L~~~s~~v~--~----~~~l~~vA~~s~~------~~~~~~~li~~A~~~vg~~---~~I~i~--~g~~~~~~~~l~~G~ 146 (478)
|+++++|++ + .+.|.++|+||++ ++++||+++++|+.+++.+ +.|+|+ .|++. +++++++||
T Consensus 127 L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~-~ds~lv~G~ 205 (515)
T 3iyg_H 127 IKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGAL-EESQLVAGV 205 (515)
T ss_pred HHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCc-cceEEEeee
Confidence 999999984 5 5677999998774 4678999999999999876 677776 47666 479999999
Q ss_pred EEeecccCCccccccccceeeecCcEEEEeccc-------------cCCHHHH-----------HHHHHHHHhcCCCEEE
Q 011725 147 KLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSLLV 202 (478)
Q Consensus 147 ~~~~g~~~~~~~~~~~~~~~~l~~p~Il~~d~~-------------i~~~~~i-----------~~~le~i~~~g~~lvI 202 (478)
+|+++|.||||.++|+ +++||+|+++|++ |++++++ .++++++.+.|+||||
T Consensus 206 ~~dk~~~~p~~~~~p~----~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi 281 (515)
T 3iyg_H 206 AFKKTFSYAGFEMQPK----KYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVL 281 (515)
T ss_pred EEecCccCcccccCCc----cccccEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9999999999988776 7999999999984 6777765 5678999999999999
Q ss_pred EecCcchhHHHHHHHhccCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccccceEEE---e
Q 011725 203 VAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---T 279 (478)
Q Consensus 203 i~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~a~~v~i---~ 279 (478)
++++|++.++++|.. .+|+++++. ++++|+|||++|||+++++ ++++++++||+|++|++ +
T Consensus 282 ~~~~I~dla~~~l~~------~gI~~v~~~-----~k~~leria~~tGa~ii~~-----l~~~~~~~LG~a~~v~~~~ig 345 (515)
T 3iyg_H 282 SKLPIGDVATQYFAD------RDMFCAGRV-----PEEDLKRTMMACGGSIQTS-----VNALSSDVLGRCQVFEETQIG 345 (515)
T ss_pred ECCcccHHHHHHHHH------cCCcccccc-----cHHHHHHHHHHhCCEEeec-----cccCCHHHCCcccEEEEEEEc
Confidence 999999988876652 246788776 6888999999999999996 89999999999999985 4
Q ss_pred CceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhc-
Q 011725 280 MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE- 358 (478)
Q Consensus 280 ~~~~~~i~g~~~~~~i~~r~~~l~~~l~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~er~l~DAl~~~k~a~~~- 358 (478)
+++|+||+||+++. .|||+|||+|+++++|+||++|||||++|+++++
T Consensus 346 ~~~~~~i~g~~~~~-------------------------------~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~ 394 (515)
T 3iyg_H 346 GERYNFFTGCPKAK-------------------------------TCTIILRGGAEQFMEETERSLHDAIMIVRRAIKND 394 (515)
T ss_pred CeEEEEEecCCCCc-------------------------------eEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 78999999998764 4999999999999999999999999999999998
Q ss_pred CcccChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCc
Q 011725 359 GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGL 433 (478)
Q Consensus 359 giVpGGGa~el~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~ip~~La~NAG~d~~~i-~kl~~~---~~~~~Gid~~~g~ 433 (478)
++|||||++|+++|.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|+
T Consensus 395 ~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~ 474 (515)
T 3iyg_H 395 SVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTED 474 (515)
T ss_pred CeecCCcHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCc
Confidence 59999999999999999999875 899999999999999999999999999999999 999874 3467999999999
Q ss_pred ccccccCCcccchHhHHHHHHhhh-----HhhhcccccCC
Q 011725 434 YVQVWGCRSTETCTIRICKGHKYD-----FIEECNLVHGG 468 (478)
Q Consensus 434 ~~dm~~~gI~Dp~~Vk~~~~~~~~-----~~~~~~~~~~~ 468 (478)
+.||++.|||||++||++++..++ +|++++++.+.
T Consensus 475 ~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_H 475 IADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNP 514 (515)
T ss_pred ccccHhccCEECHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999998887544 66788877543
No 7
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=1.4e-85 Score=708.19 Aligned_cols=400 Identities=16% Similarity=0.216 Sum_probs=364.7
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~-gi~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++
T Consensus 61 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 134 (543)
T 3ruv_A 61 GVTILREMSVEHPAAKML------IEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQEL 134 (543)
T ss_dssp HHHHHHHSCCCCHHHHHH------HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCcCHHHHHH------HHHHHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4788999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC-cc-----eeee--cCCcccceeEEEeeEE
Q 011725 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-DL-----ITIF--DRKALYNELNFVKGMK 147 (478)
Q Consensus 84 L~~~s~~v~--~~~~l~~vA~~s~~~------~~~~~~li~~A~~~vg~~-~~-----I~i~--~g~~~~~~~~l~~G~~ 147 (478)
|+++++|++ +.+.|.++|++|+++ +++|++++++|+.+++++ |. |+|+ .|+++ +++++++||+
T Consensus 135 L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~-~ds~lv~G~v 213 (543)
T 3ruv_A 135 LKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASI-DDTELIKGVL 213 (543)
T ss_dssp HHHHCEECCTTCHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCG-GGCEEESSEE
T ss_pred HHHhhCCCCCCCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCc-ccceeecceE
Confidence 999999987 789999999999864 689999999999999886 65 7776 57776 4799999999
Q ss_pred EeecccCCccccccccceeeecCcEEEEeccc-------------cCCHHH-----------HHHHHHHHHhcCCCEEEE
Q 011725 148 LEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNV-----------IRQASLPCMMQGQSLLVV 203 (478)
Q Consensus 148 ~~~g~~~~~~~~~~~~~~~~l~~p~Il~~d~~-------------i~~~~~-----------i~~~le~i~~~g~~lvIi 203 (478)
|+++|.||||+ .+++||+|+++|++ |+++++ +.++++++.+.|+||||+
T Consensus 214 ~dk~~~~~~m~-------~~~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~ 286 (543)
T 3ruv_A 214 VDKERVSAQMP-------KKVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFC 286 (543)
T ss_dssp ESCCCSCTTSC-------SEEEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred EeccccCcccc-------ccccCcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 99999999983 37999999999984 566655 567789999999999999
Q ss_pred ecCcchhHHHHHHHhccCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccccceEEE---eC
Q 011725 204 AEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TM 280 (478)
Q Consensus 204 ~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~a~~v~i---~~ 280 (478)
+++|+++++++|..+ +|++|+++ ++++|+|||++|||+++++ ++++++++||+|++|++ ++
T Consensus 287 ~~~I~~~al~~L~~~------gI~~v~~v-----~k~~le~ia~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ig~ 350 (543)
T 3ruv_A 287 QKGIDDLAQHYLAKE------GIVAARRV-----KKSDMEKLAKATGANVIAA-----IAALSAQDLGDAGLVEERKISG 350 (543)
T ss_dssp SSCBCHHHHHHHHHT------TCEEECSC-----CHHHHHHHHHHHCCCEESC-----GGGCCGGGCEEEEEEEEEEETT
T ss_pred eCCccHHHHHHHHHc------CcEEEeeC-----CHHHHHHHHHHhCCceecc-----cccCCHHHCCcccEEEEEEeCC
Confidence 999999999988843 48899987 6888999999999999996 89999999999999985 48
Q ss_pred ceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhcC-
Q 011725 281 DNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG- 359 (478)
Q Consensus 281 ~~~~~i~g~~~~~~i~~r~~~l~~~l~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~er~l~DAl~~~k~a~~~g- 359 (478)
++|+|++||++++. |||+|||+|+++++|+||++|||||++|+++++|
T Consensus 351 ~~~~~i~g~~~~~~-------------------------------~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~ 399 (543)
T 3ruv_A 351 DSMIFVEECKHPKA-------------------------------VTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGR 399 (543)
T ss_dssp EEEEEEECCSSCSS-------------------------------EEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCE
T ss_pred ceEEEEECCCCCce-------------------------------eEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999988754 8999999999999999999999999999999999
Q ss_pred cccChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCeeEeCCCCc
Q 011725 360 IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYNPARGL 433 (478)
Q Consensus 360 iVpGGGa~el~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~ip~~La~NAG~d~~~i-~kl~~~----~~~~~Gid~~~g~ 433 (478)
+|||||++|+++|.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+|+
T Consensus 400 iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~ 479 (543)
T 3ruv_A 400 IVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGA 479 (543)
T ss_dssp EEETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCS
T ss_pred eecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCc
Confidence 9999999999999999999865 899999999999999999999999999999999 999763 3468999999999
Q ss_pred ccccccCCcccchHhHHHHHHhhh-----Hhhhcccc
Q 011725 434 YVQVWGCRSTETCTIRICKGHKYD-----FIEECNLV 465 (478)
Q Consensus 434 ~~dm~~~gI~Dp~~Vk~~~~~~~~-----~~~~~~~~ 465 (478)
+.||++.|||||++||++++..++ +|+++.+|
T Consensus 480 ~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii 516 (543)
T 3ruv_A 480 VEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVI 516 (543)
T ss_dssp EEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred cccHHHcCCEecHHHHHHHHHHHHHHHHHHHhHHhhe
Confidence 999999999999999998877554 66777777
No 8
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=1.3e-85 Score=708.80 Aligned_cols=401 Identities=18% Similarity=0.259 Sum_probs=365.7
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~-gi~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++
T Consensus 72 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 145 (553)
T 3ko1_A 72 GATILDKMDLQHPAAKLL------VQIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQT 145 (553)
T ss_dssp HHHHHHSSCCCSHHHHHH------HHHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhhhccChhHHHH------HHHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHH
Confidence 469999999999999999 4788999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC--cc-------eeee--cCCcccceeEEEe
Q 011725 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN--DL-------ITIF--DRKALYNELNFVK 144 (478)
Q Consensus 84 L~~~s~~v~--~~~~l~~vA~~s~~~------~~~~~~li~~A~~~vg~~--~~-------I~i~--~g~~~~~~~~l~~ 144 (478)
|+++++|++ +.+.|.++|++|+++ +++||+++++|+.+++++ |. |+|+ .|+++ +++++++
T Consensus 146 L~~~s~~v~~~d~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~-~ds~lv~ 224 (553)
T 3ko1_A 146 IQELAQTVSINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSI-NDTQLVY 224 (553)
T ss_dssp HHTTCEECCTTCHHHHHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCG-GGCEEES
T ss_pred HHHhcCCCCCCcHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCcc-ccceeeE
Confidence 999999987 789999999999875 679999999999999875 65 7776 57776 4799999
Q ss_pred eEEEeecccCCccccccccceeeecCcEEEEecc-------------ccCCHHH-----------HHHHHHHHHhcCCCE
Q 011725 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT-------------KISNSNV-----------IRQASLPCMMQGQSL 200 (478)
Q Consensus 145 G~~~~~g~~~~~~~~~~~~~~~~l~~p~Il~~d~-------------~i~~~~~-----------i~~~le~i~~~g~~l 200 (478)
||+|+++|.||||++ +++||+|+++|+ +|+++++ +.++++++.+.|+||
T Consensus 225 G~v~dk~~~~~~m~~-------~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~v 297 (553)
T 3ko1_A 225 GIVVDKEVVHPGMPK-------RLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANV 297 (553)
T ss_dssp EEEECSCBSCTTSCS-------CCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSE
T ss_pred EEEecccccCCCCcc-------ccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceE
Confidence 999999999999832 689999999998 4677766 567789999999999
Q ss_pred EEEecCcchhHHHHHHHhccCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccccceEEE--
Q 011725 201 LVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA-- 278 (478)
Q Consensus 201 vIi~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~a~~v~i-- 278 (478)
||++++|+++++++|..+ +|++|+++ ++++|+|||++|||+++++ ++++++++||+|++|++
T Consensus 298 vI~~~~I~~~al~~L~~~------gI~~v~~v-----~k~~leria~~tGa~ivs~-----l~~l~~~~LG~a~~v~~~~ 361 (553)
T 3ko1_A 298 IICQKGIDEVAQSYLAKK------GVLAVRRA-----KKSDLEKLARATGGRVVSN-----IDEISEQDLGYASLIEERK 361 (553)
T ss_dssp EECSSCBCSHHHHHHHHH------TCEEECCC-----CHHHHHHHHTTTTCCEESC-----GGGCCSSSSEECSEEECCC
T ss_pred EEeccChHHHHHHHHHhc------chhhhhhh-----hhhhHHHHHHhhCCeeecc-----cccCChhhcchHHHHHHhh
Confidence 999999999999998853 48899987 6888999999999999996 89999999999999986
Q ss_pred -eCceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHh
Q 011725 279 -TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE 357 (478)
Q Consensus 279 -~~~~~~~i~g~~~~~~i~~r~~~l~~~l~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~er~l~DAl~~~k~a~~ 357 (478)
++++|+|++||++++. |||+|||+|+++++|+||++|||||++|++++
T Consensus 362 ig~d~~~~i~g~~~~~~-------------------------------~TI~lrG~te~~l~E~er~l~DAl~~~r~av~ 410 (553)
T 3ko1_A 362 VGEDKMVFVEGAKNPKS-------------------------------ISILIRGGLERLVDETERALRDALGTVADVIK 410 (553)
T ss_dssp CSSSCCEEEESCSSSSC-------------------------------EEEEECCSSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEEeccCCCCce-------------------------------EEEeeeccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4899999999988754 89999999999999999999999999999999
Q ss_pred cC-cccChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CC-CCeeEeCC
Q 011725 358 EG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DS-SDLGYNPA 430 (478)
Q Consensus 358 ~g-iVpGGGa~el~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~ip~~La~NAG~d~~~i-~kl~~~---~~-~~~Gid~~ 430 (478)
+| +|||||++|+++|.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++ .++|||+.
T Consensus 411 ~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~ 490 (553)
T 3ko1_A 411 DGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLY 490 (553)
T ss_dssp HCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETT
T ss_pred cCceecCCceeEeHHHHHHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEee
Confidence 99 9999999999999999999875 899999999999999999999999999999999 999874 23 67999999
Q ss_pred CCcccccccCCcccchHhHHHHHHhhh-----Hhhhccccc
Q 011725 431 RGLYVQVWGCRSTETCTIRICKGHKYD-----FIEECNLVH 466 (478)
Q Consensus 431 ~g~~~dm~~~gI~Dp~~Vk~~~~~~~~-----~~~~~~~~~ 466 (478)
+|++.||++.|||||++||++++..++ +|+++.+|.
T Consensus 491 ~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~ 531 (553)
T 3ko1_A 491 AGQPVDMWQKGVIEPALVKMNAIKAATEAATLVLRIDDVVS 531 (553)
T ss_dssp TTEEEESGGGSCEEETTHHHHHHHHHHHHHHHHHHEEEECC
T ss_pred cCCchHHHHhCccchhhhhhhhhhhcchhheEEEehHHHHH
Confidence 999999999999999999998876554 677887773
No 9
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=9.2e-85 Score=697.80 Aligned_cols=400 Identities=16% Similarity=0.181 Sum_probs=362.1
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~-gi~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++
T Consensus 54 G~tIlk~i~v~hp~Akll------~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 127 (513)
T 3iyg_B 54 GATILKNIGVDNPAAKVL------VDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQA 127 (513)
T ss_pred HHHHHHHccccCHHHHHH------HHHHHHhhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 479999999999999999 4788999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC-----CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC---cceeee--cCCcccceeEEEeeEE
Q 011725 84 LDCQARKIT-----TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---DLITIF--DRKALYNELNFVKGMK 147 (478)
Q Consensus 84 L~~~s~~v~-----~~~~l~~vA~~s~~------~~~~~~~li~~A~~~vg~~---~~I~i~--~g~~~~~~~~l~~G~~ 147 (478)
|+++++|++ +.+.|.++|+||.+ ++++|++++++|+.+++++ +.|.|+ .|++.. ++++++||+
T Consensus 128 L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~-ds~lv~G~v 206 (513)
T 3iyg_B 128 LLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLA-DSYLDEGFL 206 (513)
T ss_pred HHHhCcCcccccccCHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCcc-ceeEEeeEE
Confidence 999999986 56899999987764 3578999999999999987 778876 477764 689999999
Q ss_pred EeecccCCccccccccceeeecCcEEEEecc--------------ccCCHHHHHH-----------HHHHHHhcCCCEEE
Q 011725 148 LEWGLKSPYFFTHKNKKECVLDGALVLIYDT--------------KISNSNVIRQ-----------ASLPCMMQGQSLLV 202 (478)
Q Consensus 148 ~~~g~~~~~~~~~~~~~~~~l~~p~Il~~d~--------------~i~~~~~i~~-----------~le~i~~~g~~lvI 202 (478)
|+++|.|| | +.+++||+|+++|+ +|++++++.+ +++++.++|+||||
T Consensus 207 ~dk~~~~~-m-------~~~~en~kIll~~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi 278 (513)
T 3iyg_B 207 LDKKIGVN-Q-------PKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFI 278 (513)
T ss_pred EeccccCC-C-------ceeecCceEEEEcCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 99999988 4 34799999999998 4667777654 68899999999999
Q ss_pred EecCcchhHHHHHHHhccCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccccceEE---Ee
Q 011725 203 VAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---AT 279 (478)
Q Consensus 203 i~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~a~~v~---i~ 279 (478)
++++|+++++++|.. .+|++||+|+ +++|+|||++|||+++++ ++++++++||+|++|+ ++
T Consensus 279 ~~~~I~~~al~~L~~------~~I~av~~~~-----~~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig 342 (513)
T 3iyg_B 279 NRQLIYNYPEQLFGA------AGVMAIEHAD-----FVGVERLALVTGGEIAST-----FDHPELVKLGSCKLIEEVMIG 342 (513)
T ss_pred EcCCccHHHHHHHHH------cCceEEecCC-----HHHHHHHHHHhCCEEecc-----cccCCHhHCCcccEEEEEEEC
Confidence 999999999998885 4599999996 457999999999999996 8999999999999997 78
Q ss_pred CceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhc-
Q 011725 280 MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE- 358 (478)
Q Consensus 280 ~~~~~~i~g~~~~~~i~~r~~~l~~~l~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~er~l~DAl~~~k~a~~~- 358 (478)
+++++++.||+++ ++|||+|||+|+++++|+||++|||||++|+++++
T Consensus 343 ~~~~~~~~g~~~~-------------------------------~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~ 391 (513)
T 3iyg_B 343 EDKLIHFSGVALG-------------------------------EACTIVLRGATQQILDEAERSLHDALCVLAQTVKDS 391 (513)
T ss_pred CeEEEEEecCCCC-------------------------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999998754 46999999999999999999999999999999998
Q ss_pred CcccChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCc
Q 011725 359 GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGL 433 (478)
Q Consensus 359 giVpGGGa~el~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~ip~~La~NAG~d~~~i-~kl~~~---~~~~~Gid~~~g~ 433 (478)
++|||||++|+++|++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|+
T Consensus 392 ~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~ 471 (513)
T 3iyg_B 392 RTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGT 471 (513)
T ss_pred cEEeCCcHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCC
Confidence 69999999999999999999875 899999999999999999999999999999999 999874 4568999999999
Q ss_pred ccccccCCcccchHhHHHHHHhhh-----Hhhhccccc
Q 011725 434 YVQVWGCRSTETCTIRICKGHKYD-----FIEECNLVH 466 (478)
Q Consensus 434 ~~dm~~~gI~Dp~~Vk~~~~~~~~-----~~~~~~~~~ 466 (478)
+.||++.|||||++||++++..++ +|+++.+|.
T Consensus 472 ~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~ 509 (513)
T 3iyg_B 472 IGDMSVLGITESFQVKRQVLLSAAEAAEVILRVDNIIK 509 (513)
T ss_pred ccchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998877554 666777763
No 10
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=3.5e-85 Score=699.09 Aligned_cols=400 Identities=17% Similarity=0.223 Sum_probs=331.7
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~-gi~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|+++||+||++ +++|++||+++||||||+|+||++||++|++++. |+||+.|++||++|++.++++
T Consensus 15 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 88 (500)
T 3aq1_B 15 GATILKEMDIQHPAAKMI------VEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRHAAEKCREI 88 (500)
T ss_dssp ----------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCcCCCHHHHHH------HHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999 3778999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC--cc--------eeee--cCCcccceeEEE
Q 011725 84 LDCQARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN--DL--------ITIF--DRKALYNELNFV 143 (478)
Q Consensus 84 L~~~s~~v~--~~~~l~~vA~~s~~------~~~~~~~li~~A~~~vg~~--~~--------I~i~--~g~~~~~~~~l~ 143 (478)
|+++++|++ +.+.|.++|+||++ +++.|++++++|+.+++++ |. |+|+ +|+++. +++++
T Consensus 89 L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G~~~~-ds~lv 167 (500)
T 3aq1_B 89 LETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGGSID-DSELI 167 (500)
T ss_dssp HHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEESSCGG-GCEEE
T ss_pred HHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEecCCCcc-ceEEE
Confidence 999999986 48899999997753 4788999999999999875 43 5666 788884 79999
Q ss_pred eeEEEeecccCCccccccccceeeecCcEEEEeccc-------------cCCHHHH-----------HHHHHHHHhcCCC
Q 011725 144 KGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQS 199 (478)
Q Consensus 144 ~G~~~~~g~~~~~~~~~~~~~~~~l~~p~Il~~d~~-------------i~~~~~i-----------~~~le~i~~~g~~ 199 (478)
+||+|+++|.||||++ +++||+|+++|++ |++++++ .++++++.++|+|
T Consensus 168 ~G~v~dk~~~~~~m~~-------~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~ 240 (500)
T 3aq1_B 168 DGLVIDKERSHPNMPE-------KVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASGAN 240 (500)
T ss_dssp SEEEESCCCSSTTSCS-------EEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHTTCCS
T ss_pred eeeEEeecCCCCCCcc-------cccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 9999999999999832 7899999999998 6666665 8899999999999
Q ss_pred EEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccccceEEEe
Q 011725 200 LLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT 279 (478)
Q Consensus 200 lvIi~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~a~~v~i~ 279 (478)
|||++++|+++++++|..|+ |++|++. ++++|+|||++|||+++++ ++++++++||+|++|++.
T Consensus 241 lvi~~~~I~~~al~~L~~~~------I~av~~~-----~k~~le~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~ 304 (500)
T 3aq1_B 241 VVFCQKGIDDMAQYYIEKAG------IYAVRRV-----KKSDLKRLSKVTGATIIQD-----LDQITTEDVGTAGLVEEK 304 (500)
T ss_dssp EEEESSCBCHHHHHHHHHTT------CEEECSC-----CHHHHHHHHHHHCCCCBSC-----TTCCCSTTCEEEEEEEEE
T ss_pred EEEECCCcCHHHHHHHHHCC------EEEEEeC-----CHHHHHHHHHHhCCeEecc-----cccCCHhHCCCceEEEEE
Confidence 99999999999999999864 8899876 6888999999999999996 899999999999999864
Q ss_pred ---CceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHH
Q 011725 280 ---MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAK 356 (478)
Q Consensus 280 ---~~~~~~i~g~~~~~~i~~r~~~l~~~l~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~er~l~DAl~~~k~a~ 356 (478)
+++|+|++||+++ ++|||+|||+|+++++|+||++|||||++|+++
T Consensus 305 ~ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~ 353 (500)
T 3aq1_B 305 EVRGGKMTYVTGCQNS-------------------------------KAVTVLLHGGTEHVVDSLDHALNDALHVVGVVI 353 (500)
T ss_dssp ECSSSEEEEEEEETTC-------------------------------CCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCeEEEEEECCCCC-------------------------------ceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999998765 469999999999999999999999999999999
Q ss_pred hcC-cccChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCC
Q 011725 357 EEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPA 430 (478)
Q Consensus 357 ~~g-iVpGGGa~el~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~ip~~La~NAG~d~~~i-~kl~~~---~~~~~Gid~~ 430 (478)
++| +|||||++|+++|.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.
T Consensus 354 ~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~ 433 (500)
T 3aq1_B 354 EDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEALEVIPVALAENAGLDPIDIMVELRSQHEKGNKNAGLNVY 433 (500)
T ss_dssp HHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTEEECTT
T ss_pred HCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeeEeCC
Confidence 999 9999999999999999999864 899999999999999999999999999999999 999863 3468999999
Q ss_pred CCcccccccCCcccchHhHHHHHHhhh-----Hhhhcccc
Q 011725 431 RGLYVQVWGCRSTETCTIRICKGHKYD-----FIEECNLV 465 (478)
Q Consensus 431 ~g~~~dm~~~gI~Dp~~Vk~~~~~~~~-----~~~~~~~~ 465 (478)
+|++.||++.|||||++||++++..+. +|+++.+|
T Consensus 434 ~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI 473 (500)
T 3aq1_B 434 TGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVV 473 (500)
T ss_dssp TCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC----
T ss_pred CCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998776665 55577777
No 11
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=1.1e-85 Score=710.56 Aligned_cols=405 Identities=16% Similarity=0.236 Sum_probs=365.9
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~-gi~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++
T Consensus 66 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 139 (559)
T 3p9d_A 66 GATILSLLDVQHPAGKIL------VELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRF 139 (559)
T ss_dssp HHHHHHHHCCCSHHHHHH------HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHH------HHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4788999999999999999999999999999999 999999999999999999999
Q ss_pred Hhc-cccccCC--HHHHHHHHHHhcCC------ChhHHHHHHHHHHhhcc-----Ccc-----eeee--cCCcccceeEE
Q 011725 84 LDC-QARKITT--FEEIAQVGTTAANG------DGEIGELIAKVFEKGWE-----NDL-----ITIF--DRKALYNELNF 142 (478)
Q Consensus 84 L~~-~s~~v~~--~~~l~~vA~~s~~~------~~~~~~li~~A~~~vg~-----~~~-----I~i~--~g~~~~~~~~l 142 (478)
|++ +++|++. .+.|.++|++|+++ +++|++++++|+.++++ ++. |+|+ .|+++. ++++
T Consensus 140 L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~-ds~l 218 (559)
T 3p9d_A 140 INEVLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSAT-ESLL 218 (559)
T ss_dssp HHHHTGGGSCC--CTTHHHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSS-CCBC
T ss_pred HHHhcccCCCCCCHHHHHHHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCcc-ceeE
Confidence 999 9999874 67899999999975 68999999999999984 244 4444 388886 6999
Q ss_pred EeeEEEeecccCCccccccccceeeec--CcEEEEecccc-------------CCHHH-----------HHHHHHHHHhc
Q 011725 143 VKGMKLEWGLKSPYFFTHKNKKECVLD--GALVLIYDTKI-------------SNSNV-----------IRQASLPCMMQ 196 (478)
Q Consensus 143 ~~G~~~~~g~~~~~~~~~~~~~~~~l~--~p~Il~~d~~i-------------~~~~~-----------i~~~le~i~~~ 196 (478)
++||+|+++|.||||++ +++ ||+|+++|++| +++++ ++++++++.++
T Consensus 219 v~G~v~dk~~~~~~m~~-------~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~ 291 (559)
T 3p9d_A 219 VPGYALNCTVASQAMPK-------RIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDA 291 (559)
T ss_dssp CSEECCCCCCSSTTSCS-------EECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eccEEEeecccCCCcce-------eeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999853 677 99999999876 34433 67889999999
Q ss_pred CCCEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCc-CCCCCCCccccce
Q 011725 197 GQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNS-TYFVPLKLGSCKR 275 (478)
Q Consensus 197 g~~lvIi~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~-~~~~~~~LG~a~~ 275 (478)
|+||||++++|+++++++|..|+ |++|+++ ++++|+|||++|||+++++..++.+ +++++++||+|++
T Consensus 292 g~~lvI~~~~I~~~al~~L~~~~------I~av~~~-----~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~ 360 (559)
T 3p9d_A 292 GAQVVLTTKGIDDLCLKEFVEAK------IMGVRRC-----KKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDE 360 (559)
T ss_dssp CCSEEEESSCCCGGGTHHHHHTT------CEEESSC-----CHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEE
T ss_pred CCCEEEEcCCCCHHHHHHHHHcC------CceEccC-----CHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceE
Confidence 99999999999999999999875 7899877 6888999999999999999766655 8899999999999
Q ss_pred EE---EeCceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHH
Q 011725 276 VI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAV 352 (478)
Q Consensus 276 v~---i~~~~~~~i~g~~~~~~i~~r~~~l~~~l~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~er~l~DAl~~~ 352 (478)
|+ +++++|+|+.||+++ ++|||+|||+|+++++|+||++|||||++
T Consensus 361 v~~~~ig~~~~~~~~g~~~~-------------------------------~~~tI~lrG~te~~l~E~kr~l~DAL~~~ 409 (559)
T 3p9d_A 361 VVQAKFSDDECILIKGTSKH-------------------------------SSSSIILRGANDYSLDEMERSLHDSLSVV 409 (559)
T ss_dssp EEEEECSSCEEECEEEESSS-------------------------------CCCCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCceEEEEEcCCCC-------------------------------CEEEEEEcCCCHHHHHHHHHHHHHHHHHH
Confidence 98 689999999998765 56999999999999999999999999999
Q ss_pred HHHHhcC-cccChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCC---
Q 011725 353 QAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSS--- 423 (478)
Q Consensus 353 k~a~~~g-iVpGGGa~el~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~ip~~La~NAG~d~~~i-~kl~~~---~~~--- 423 (478)
|+++++| +|||||++|+++|.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.
T Consensus 410 r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~ 489 (559)
T 3p9d_A 410 KRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKP 489 (559)
T ss_dssp HHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC-
T ss_pred HHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccc
Confidence 9999999 9999999999999999999875 899999999999999999999999999999999 999863 333
Q ss_pred ---------CeeEeCCCCcccccccCCcccchHhHHHHHHhh-----hHhhhcccc
Q 011725 424 ---------DLGYNPARGLYVQVWGCRSTETCTIRICKGHKY-----DFIEECNLV 465 (478)
Q Consensus 424 ---------~~Gid~~~g~~~dm~~~gI~Dp~~Vk~~~~~~~-----~~~~~~~~~ 465 (478)
++|||+.+|++.||++.|||||++||++++..+ .+|+++.+|
T Consensus 490 ~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii 545 (559)
T 3p9d_A 490 EDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILRIDTMI 545 (559)
T ss_dssp ---CCCCCCCEEECTTSSSEEESTTSSCCEEHHHHHHHHHHHHHHHHHHHTEEEEE
T ss_pred cccccccccceeEECCCCcEeehhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhh
Confidence 799999999999999999999999999887744 466788777
No 12
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.6e-84 Score=698.25 Aligned_cols=405 Identities=15% Similarity=0.177 Sum_probs=362.4
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~-gi~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|+++||+||++ + ++|++||+++||||||+||||++||++|+++++ |+||+.|++||++|++.++++
T Consensus 52 G~tIlk~i~v~hP~akll--~----~~a~~qd~e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 125 (529)
T 3iyg_A 52 GATILKLLEVEHPAAKVL--C----ELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRY 125 (529)
T ss_pred HHHHHHHcccCChHHHHH--H----HHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 479999999999999999 3 778999999999999999999999999999999 999999999999999999999
Q ss_pred Hhc-cccccC--CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhc---cCc-----c--eeee--cCCcccceeEE
Q 011725 84 LDC-QARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGW---END-----L--ITIF--DRKALYNELNF 142 (478)
Q Consensus 84 L~~-~s~~v~--~~~~l~~vA~~s~~------~~~~~~~li~~A~~~vg---~~~-----~--I~i~--~g~~~~~~~~l 142 (478)
|++ +++|++ +.+.|.++|+||++ ++++|++++++|+.+++ ++| . |+|+ .|+++. ++++
T Consensus 126 L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~-ds~l 204 (529)
T 3iyg_A 126 ISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQM-ESML 204 (529)
T ss_pred HHHhcccCCCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCcc-ceEE
Confidence 999 999987 68899999999875 36899999999999997 344 2 5554 587774 6999
Q ss_pred EeeEEEeecccCCccccccccceeeecCcEEEEecccc-------------CCHHH-----------HHHHHHHHHhcCC
Q 011725 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKI-------------SNSNV-----------IRQASLPCMMQGQ 198 (478)
Q Consensus 143 ~~G~~~~~g~~~~~~~~~~~~~~~~l~~p~Il~~d~~i-------------~~~~~-----------i~~~le~i~~~g~ 198 (478)
++||+|+++|.||+|++ .++||+|+++|+++ +++++ +.++++++.+.|+
T Consensus 205 v~G~v~dk~~~~~~m~~-------~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~ 277 (529)
T 3iyg_A 205 INGYALNCVVGSQGMPK-------RIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGA 277 (529)
T ss_pred EeeeEEecCcccccCCc-------ccCCceEEEecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999854 68999999999854 33332 5677899999999
Q ss_pred CEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCC-cCCCCCCCccccceEE
Q 011725 199 SLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMN-STYFVPLKLGSCKRVI 277 (478)
Q Consensus 199 ~lvIi~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~-~~~~~~~~LG~a~~v~ 277 (478)
||||++++|+++++++|..|+ |++||+. ++++|+|||++|||+++++..+++ .+++++++||+|++|+
T Consensus 278 nvvi~~~~I~d~al~~L~~~g------I~av~~v-----~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~ 346 (529)
T 3iyg_A 278 NVILTTGGIDDMCLKYFVEAG------AMAVRRV-----LKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVV 346 (529)
T ss_pred CEEEECCCCCHHHHHHHHHcC------CceeccC-----CHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEE
Confidence 999999999999999999874 8899987 688899999999999999865544 3556788999999997
Q ss_pred ---EeCceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHH
Q 011725 278 ---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQA 354 (478)
Q Consensus 278 ---i~~~~~~~i~g~~~~~~i~~r~~~l~~~l~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~er~l~DAl~~~k~ 354 (478)
+++++|+||+||+++. +|||+|||+|+++++|+||++|||||++|+
T Consensus 347 ~~~ig~~~~~~~~g~~~~~-------------------------------~~TI~lrG~t~~~l~E~er~l~Dal~v~r~ 395 (529)
T 3iyg_A 347 QERICDDELILIKNTKART-------------------------------SASVILRGANDFMCDEMERSLHDALCVVKR 395 (529)
T ss_pred EEEeCCceEEEEEcCCCCc-------------------------------eEEEEECCchHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999998764 599999999999999999999999999999
Q ss_pred HHhcC-cccChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CC------
Q 011725 355 AKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DS------ 422 (478)
Q Consensus 355 a~~~g-iVpGGGa~el~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~ip~~La~NAG~d~~~i-~kl~~~---~~------ 422 (478)
++++| +|||||++|+++|.+|++|+.. +|++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++
T Consensus 396 ~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~ 475 (529)
T 3iyg_A 396 VLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERK 475 (529)
T ss_pred HhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccc
Confidence 99999 9999999999999999999876 899999999999999999999999999999999 999863 22
Q ss_pred --CCeeEeCCCCcccccccCCcccchHhHHHHHHhhh-----Hhhhcccc
Q 011725 423 --SDLGYNPARGLYVQVWGCRSTETCTIRICKGHKYD-----FIEECNLV 465 (478)
Q Consensus 423 --~~~Gid~~~g~~~dm~~~gI~Dp~~Vk~~~~~~~~-----~~~~~~~~ 465 (478)
.++|||+.+|++.||++.|||||+.||++++..++ +|++++++
T Consensus 476 ~~~~~G~d~~~g~~~d~~~~gV~dp~~vk~~al~~A~e~a~~iL~iD~ii 525 (529)
T 3iyg_A 476 NLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLI 525 (529)
T ss_pred cCceeeeeCCCCCccChhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhh
Confidence 57999999999999999999999999998776654 66788776
No 13
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.7e-84 Score=693.80 Aligned_cols=408 Identities=15% Similarity=0.150 Sum_probs=359.6
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~-gi~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++
T Consensus 52 G~tIlk~i~~~hP~Akll------~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 125 (515)
T 3iyg_E 52 GATILSMMDVDHQIAKLM------VELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEH 125 (515)
T ss_pred HHHHHHHcccCCHHHHHH------HHHHHHhhhhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 479999999999999999 4788999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC----CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC-------cceeee--cCCcccceeEEEe
Q 011725 84 LDCQARKIT----TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-------DLITIF--DRKALYNELNFVK 144 (478)
Q Consensus 84 L~~~s~~v~----~~~~l~~vA~~s~~~------~~~~~~li~~A~~~vg~~-------~~I~i~--~g~~~~~~~~l~~ 144 (478)
|+++++|++ +.+.|.++|++|+++ .+.|+++++||+.++.+. +.|+|+ .|+++. ++++++
T Consensus 126 L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~-ds~lv~ 204 (515)
T 3iyg_E 126 LDKISDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLE-DTKLIK 204 (515)
T ss_pred HHHhceecCCCccCHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcc-cceEEe
Confidence 999998875 368899999999975 357899999999988642 235555 588875 699999
Q ss_pred eEEEeecccCCcccccccc-ceeeecCcEEEE-----eccccCCHHHH-----------HHHHHHHHhcCCCEEEEecCc
Q 011725 145 GMKLEWGLKSPYFFTHKNK-KECVLDGALVLI-----YDTKISNSNVI-----------RQASLPCMMQGQSLLVVAEDV 207 (478)
Q Consensus 145 G~~~~~g~~~~~~~~~~~~-~~~~l~~p~Il~-----~d~~i~~~~~i-----------~~~le~i~~~g~~lvIi~~~i 207 (478)
||+|+++|.||||+++.+. +...+++|+.+. ++.+|++++++ .++++++.++|+||||++++|
T Consensus 205 G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I 284 (515)
T 3iyg_E 205 GVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGF 284 (515)
T ss_pred eEEEecccccccccccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 9999999999999876543 333445554443 33457777765 678999999999999999999
Q ss_pred chhHHHHHHHhccCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccccceEEE-----eCce
Q 011725 208 ENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA-----TMDN 282 (478)
Q Consensus 208 ~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~a~~v~i-----~~~~ 282 (478)
+++++++|..|+ +.+++++ ++++|+|||++|||+++++ ++++++++||+|++|++ ++++
T Consensus 285 ~~~al~~L~~~~------I~~v~~v-----~k~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig~~k~~ 348 (515)
T 3iyg_E 285 DDEANHLLLQND------LPAVRWV-----GGPEIELIAIATGGRIVPR-----FSELTAEKLGFAGLVKEISFGTTKDK 348 (515)
T ss_pred CHHHHHHHHHCC------CEEEecc-----CHHHHHHHHHHhCCEEecc-----cccCCHHHCCcceEEEEEEeccccce
Confidence 999999999876 6789988 4778999999999999996 89999999999999986 4489
Q ss_pred EEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhcC-cc
Q 011725 283 VVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IV 361 (478)
Q Consensus 283 ~~~i~g~~~~~~i~~r~~~l~~~l~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~er~l~DAl~~~k~a~~~g-iV 361 (478)
|+||+||+++. .|||+|||+|+++++|+||++|||||++|+++++| +|
T Consensus 349 ~~~~~g~~~~~-------------------------------~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iV 397 (515)
T 3iyg_E 349 MLVIEQCKNSR-------------------------------AVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVV 397 (515)
T ss_pred EEEEEcCCCCc-------------------------------eEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 99999998775 48999999999999999999999999999999999 99
Q ss_pred cChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCeeEeCCCCccc
Q 011725 362 PGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYNPARGLYV 435 (478)
Q Consensus 362 pGGGa~el~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~ip~~La~NAG~d~~~i-~kl~~~----~~~~~Gid~~~g~~~ 435 (478)
||||++|+++|.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+|++.
T Consensus 398 pGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~ 477 (515)
T 3iyg_E 398 YGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTN 477 (515)
T ss_pred CCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCccc
Confidence 99999999999999999876 899999999999999999999999999999999 999863 356799999999999
Q ss_pred ccccCCcccchHhHHHHHHhhh-----Hhhhccccc
Q 011725 436 QVWGCRSTETCTIRICKGHKYD-----FIEECNLVH 466 (478)
Q Consensus 436 dm~~~gI~Dp~~Vk~~~~~~~~-----~~~~~~~~~ 466 (478)
||++.|||||++||++++..++ +|++++++.
T Consensus 478 d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~ 513 (515)
T 3iyg_E 478 DMKHQHVIETLIGKKQQISLATQMVRMILKIDDIRK 513 (515)
T ss_pred chHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHhhc
Confidence 9999999999999998877544 666777764
No 14
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=3.1e-85 Score=703.26 Aligned_cols=404 Identities=14% Similarity=0.130 Sum_probs=363.4
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~-gi~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++
T Consensus 61 G~tIlk~i~v~hP~akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 134 (528)
T 3p9d_D 61 GHTILKQMAILHPVARML------VEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDI 134 (528)
T ss_dssp HHHHHHHSCCCCTTHHHH------HHHHHHHHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccCCHHHHHH------HHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHH
Confidence 479999999999999998 4788999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhcc--Ccceeeec-------CCcccceeEEEeeE
Q 011725 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWE--NDLITIFD-------RKALYNELNFVKGM 146 (478)
Q Consensus 84 L~~~s~~v~--~~~~l~~vA~~s~~~------~~~~~~li~~A~~~vg~--~~~I~i~~-------g~~~~~~~~l~~G~ 146 (478)
|+++++|++ +.+.|.++|++|+++ +++|++++++|+.++++ +|.|+++. |+++. ++++++||
T Consensus 135 L~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~-ds~lv~G~ 213 (528)
T 3p9d_D 135 LLEMCHKVSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTID-DTEMIDGV 213 (528)
T ss_dssp HHTTCCCCCSCCHHHHHHHHHHHSCSSSCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSC-CCEEESSC
T ss_pred HHHhhCCCCCCCHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCcc-ceEEEeee
Confidence 999999987 789999999999975 57899999999999986 45554443 88885 68999999
Q ss_pred EEeecccCCccccccccceeeecCcEEEEeccccC-------------CHH-----------HHHHHHHHHHhcCCCEEE
Q 011725 147 KLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSN-----------VIRQASLPCMMQGQSLLV 202 (478)
Q Consensus 147 ~~~~g~~~~~~~~~~~~~~~~l~~p~Il~~d~~i~-------------~~~-----------~i~~~le~i~~~g~~lvI 202 (478)
+|+++|.|||| |+.+++||+|+++|++|+ +++ .+.++++++.+.|+||||
T Consensus 214 v~dk~~~~~~~------m~~~ien~kIll~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi 287 (528)
T 3p9d_D 214 VLTQTAIKSAG------GPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLL 287 (528)
T ss_dssp BCCCCCCCSSS------CCSEESSEEEEEECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEeecccCccc------CcccccCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999995 344799999999999765 443 377899999999999999
Q ss_pred EecCc-----chhHHHHHHHhccCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccccceEE
Q 011725 203 VAEDV-----ENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI 277 (478)
Q Consensus 203 i~~~i-----~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~a~~v~ 277 (478)
++++| +++++++|..|+ |++||++ ++++|+|||++|||+++++ ++++++++||+|++|+
T Consensus 288 ~~~~I~~~a~~~~al~~L~~~~------I~av~~~-----~k~~le~ia~~tGa~ii~~-----~~~l~~~~LG~a~~v~ 351 (528)
T 3p9d_D 288 IQKSILRDAVNDLALHFLSKLN------IMVVKDI-----EREEIEFLSKGLGCKPIAD-----IELFTEDRLDSADLVE 351 (528)
T ss_dssp ESSCSCTTSCSCHHHHHHTTTS------CCEEECC-----CTHHHHHHHHHHTCCCCSC-----STTCCSSSEEEESCEE
T ss_pred EeCCcccccCCHHHHHHHHHcC------cEEEEeC-----CHHHHHHHHHHHCCEEecc-----cccCCHHHCCcccEEE
Confidence 99999 999999888654 8899987 5788999999999999997 7889999999999997
Q ss_pred ---EeCceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHH
Q 011725 278 ---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQA 354 (478)
Q Consensus 278 ---i~~~~~~~i~g~~~~~~i~~r~~~l~~~l~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~er~l~DAl~~~k~ 354 (478)
+++++++++.||.... .+++|||+|||+|+++++|+||++|||||++|+
T Consensus 352 ~~~ig~~~~~~i~g~~~~~----------------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~ 403 (528)
T 3p9d_D 352 EIDSDGSKIVRVTGIRNNN----------------------------ARPTVSVVIRGANNMIIDETERSLHDALCVIRC 403 (528)
T ss_dssp CCEETTEECCBCTTBCCGG----------------------------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHH
T ss_pred EEEECCEEEEEEEcccccC----------------------------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4678899999986321 146799999999999999999999999999999
Q ss_pred HHhcC-cccChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEe
Q 011725 355 AKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYN 428 (478)
Q Consensus 355 a~~~g-iVpGGGa~el~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~ip~~La~NAG~d~~~i-~kl~~~---~~~~~Gid 428 (478)
++++| +|||||++|+++|.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||
T Consensus 404 av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d 483 (528)
T 3p9d_D 404 LVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGIS 483 (528)
T ss_dssp HHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCC
T ss_pred HHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCcccee
Confidence 99999 9999999999999999999875 899999999999999999999999999999999 999874 45679999
Q ss_pred CCCCcccccccCCcccchHhHHHHHHhhh-----Hhhhcccc
Q 011725 429 PARGLYVQVWGCRSTETCTIRICKGHKYD-----FIEECNLV 465 (478)
Q Consensus 429 ~~~g~~~dm~~~gI~Dp~~Vk~~~~~~~~-----~~~~~~~~ 465 (478)
+.+|++.||++.|||||++||++++..++ +|++++++
T Consensus 484 ~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii 525 (528)
T 3p9d_D 484 VRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDIA 525 (528)
T ss_dssp SSSSSCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCSCCC
T ss_pred cCCCCccchHhccCeecHHHHHHHHHHHHHHHHHHHhhhHhe
Confidence 99999999999999999999998877544 66677765
No 15
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=2.3e-84 Score=699.34 Aligned_cols=401 Identities=16% Similarity=0.231 Sum_probs=367.0
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~-gi~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|+++||+||++ +++|++||+++||||||+||||++||+++++++. |+||+.|++||++|++.++++
T Consensus 65 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 138 (548)
T 1q3q_A 65 CATILDKIDLQHPAAKMM------VEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEI 138 (548)
T ss_dssp HHHHHHHSCCCSHHHHHH------HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccchHHHHH------HHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4778999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC--c-------ceeee--cCCcccceeEEEe
Q 011725 84 LDCQARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN--D-------LITIF--DRKALYNELNFVK 144 (478)
Q Consensus 84 L~~~s~~v~--~~~~l~~vA~~s~~------~~~~~~~li~~A~~~vg~~--~-------~I~i~--~g~~~~~~~~l~~ 144 (478)
|+++++|++ +.++|.++|+||++ ++++|++++++|+.+++++ | .|+|+ +|+++. ++++++
T Consensus 139 L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~-ds~lv~ 217 (548)
T 1q3q_A 139 LDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVE-ESELVR 217 (548)
T ss_dssp HHHHCEECCTTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGG-GCEEES
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCcc-ceEEEe
Confidence 999999986 48899999998764 3578999999999999875 4 67887 788886 689999
Q ss_pred eEEEeecccCCccccccccceeeecCcEEEEeccc-------------cCCHHHH-----------HHHHHHHHhcCCCE
Q 011725 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSL 200 (478)
Q Consensus 145 G~~~~~g~~~~~~~~~~~~~~~~l~~p~Il~~d~~-------------i~~~~~i-----------~~~le~i~~~g~~l 200 (478)
||+|+++|.||||+ .+++||+|+++|++ |++++++ .++++++.++|+||
T Consensus 218 G~v~dk~~~~~~m~-------~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~l 290 (548)
T 1q3q_A 218 GVVIDKEVVHPRMP-------KRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANV 290 (548)
T ss_dssp SEEESCCCSSTTSC-------SEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCE
T ss_pred eEEEeccCCCCCCc-------ceecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCE
Confidence 99999999999983 26899999999998 7778775 78899999999999
Q ss_pred EEEecCcchhHHHHHHHhccCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccccceEEE--
Q 011725 201 LVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA-- 278 (478)
Q Consensus 201 vIi~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~a~~v~i-- 278 (478)
||++++|+++++++|..|+ |+||++. ++++|+|||++|||+++++ ++++++++||+|++|++
T Consensus 291 vi~~~~I~~~al~~L~~~~------I~av~~~-----~k~~le~ia~~tGa~ii~~-----l~~~~~~~LG~a~~v~~~~ 354 (548)
T 1q3q_A 291 VFVQKGIDDLAQHYLAKYG------IMAVRRV-----KKSDMEKLAKATGAKIVTN-----VKDLTPEDLGYAEVVEERK 354 (548)
T ss_dssp EEESSCBCHHHHHHHHHTT------CEEECSC-----CHHHHHHHHHHHCCCCBSS-----GGGCCGGGCEEESEEEEEE
T ss_pred EEEcCCcCHHHHHHHHHCC------cEEEccC-----CHHHHHHHHHHhCCeEecc-----cccCCHHHCCCceEEEEEE
Confidence 9999999999999999864 8899876 6888999999999999996 89999999999999986
Q ss_pred -eCceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHh
Q 011725 279 -TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE 357 (478)
Q Consensus 279 -~~~~~~~i~g~~~~~~i~~r~~~l~~~l~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~er~l~DAl~~~k~a~~ 357 (478)
++++|+|++||+++ ++|||+|||+|+++++|+||++|||||++|++++
T Consensus 355 ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~ 403 (548)
T 1q3q_A 355 LAGENMIFVEGCKNP-------------------------------KAVTILIRGGTEHVIDEVERALEDAVKVVKDVME 403 (548)
T ss_dssp ETTEEEEEEECCSSC-------------------------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCceEEEEecCCCC-------------------------------CeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999999865 4599999999999999999999999999999999
Q ss_pred cC-cccChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCC
Q 011725 358 EG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR 431 (478)
Q Consensus 358 ~g-iVpGGGa~el~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~ip~~La~NAG~d~~~i-~kl~~~---~~~~~Gid~~~ 431 (478)
+| +|||||++|+++|.+|++|+.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+
T Consensus 404 ~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~ 483 (548)
T 1q3q_A 404 DGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFE 483 (548)
T ss_dssp SCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTT
T ss_pred CCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCC
Confidence 99 9999999999999999999875 899999999999999999999999999999999 999863 34689999999
Q ss_pred CcccccccCCcccchHhHHHHHHhhh-----Hhhhccccc
Q 011725 432 GLYVQVWGCRSTETCTIRICKGHKYD-----FIEECNLVH 466 (478)
Q Consensus 432 g~~~dm~~~gI~Dp~~Vk~~~~~~~~-----~~~~~~~~~ 466 (478)
|++.||++.|||||+.||++++..+. +|+++.+|.
T Consensus 484 g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~ 523 (548)
T 1q3q_A 484 GKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIA 523 (548)
T ss_dssp TEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCccchhhcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998777664 666777774
No 16
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=2.2e-84 Score=699.07 Aligned_cols=400 Identities=17% Similarity=0.209 Sum_probs=365.6
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~-gi~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|+++||+||++ +++|++||+++||||||+||||++||+++++++. |+||+.|++||++|++.++++
T Consensus 64 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 137 (545)
T 1a6d_A 64 GATILKEMDVEHPTAKMI------VEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKI 137 (545)
T ss_dssp HHHHHHHSCCCSHHHHHH------HGGGGCTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhccchHHHHH------HHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4778999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC-CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC---------cceeee--cCCcccceeEEEee
Q 011725 84 LDCQARKIT-TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---------DLITIF--DRKALYNELNFVKG 145 (478)
Q Consensus 84 L~~~s~~v~-~~~~l~~vA~~s~~------~~~~~~~li~~A~~~vg~~---------~~I~i~--~g~~~~~~~~l~~G 145 (478)
|+++++| + +.+.|.++|+||++ ++++|++++++|+.+++++ +.|+|+ +|+++. ++++++|
T Consensus 138 L~~~s~~-~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~-ds~lv~G 215 (545)
T 1a6d_A 138 IDEIAEK-STDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVN-DTQFISG 215 (545)
T ss_dssp HHHHCEE-CCCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCST-TCEEESE
T ss_pred HHHhcCC-CCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCce-eeEEEee
Confidence 9999998 7 78999999998754 4688999999999999875 368887 788885 6899999
Q ss_pred EEEeecccCCccccccccceeeecCcEEEEeccc-------------cCCHHHH-----------HHHHHHHHhcCCCEE
Q 011725 146 MKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSLL 201 (478)
Q Consensus 146 ~~~~~g~~~~~~~~~~~~~~~~l~~p~Il~~d~~-------------i~~~~~i-----------~~~le~i~~~g~~lv 201 (478)
|+|+++|.||||+ .+++||+|+++|++ |++++++ .++++++.++|+|||
T Consensus 216 ~v~dk~~~~~~m~-------~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lv 288 (545)
T 1a6d_A 216 IVIDKEKVHSKMP-------DVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVV 288 (545)
T ss_dssp EEESCCCSCTTSC-------SEEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred EEEeccCCCCCCc-------ceecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 9999999999983 26899999999998 6677665 788999999999999
Q ss_pred EEecCcchhHHHHHHHhccCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccccceEEE---
Q 011725 202 VVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA--- 278 (478)
Q Consensus 202 Ii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~a~~v~i--- 278 (478)
|++++|+++++++|..|+ |+||++. ++++|+|||++|||+++++ ++++++++||+|++|++
T Consensus 289 i~~~~I~~~al~~L~~~~------I~av~~~-----~k~~le~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~i 352 (545)
T 1a6d_A 289 LCQKGIDDVAQHYLAKEG------IYAVRRV-----KKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEERKI 352 (545)
T ss_dssp EESSCBCHHHHHHHHHHT------CEEECSC-----CHHHHHHHHHHHCCCEESS-----GGGCCGGGCEEEEEEEEEEE
T ss_pred EECCCccHHHHHHHHHCC------eeEeccC-----CHHHHHHHHHHhCCeeecc-----cccCCHHHCCCceEEEEEEe
Confidence 999999999999999875 8899876 6888999999999999996 89999999999999986
Q ss_pred eCceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhc
Q 011725 279 TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE 358 (478)
Q Consensus 279 ~~~~~~~i~g~~~~~~i~~r~~~l~~~l~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~er~l~DAl~~~k~a~~~ 358 (478)
++++|+|++||+++ ++|||+|||+|+++++|+||++|||||++|+++++
T Consensus 353 g~~~~~~~~g~~~~-------------------------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~ 401 (545)
T 1a6d_A 353 GDDRMTFVMGCKNP-------------------------------KAVSILIRGGTDHVVSEVERALNDAIRVVAITKED 401 (545)
T ss_dssp TTEEEEEEEEESCS-------------------------------SCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCceEEEEecCCCC-------------------------------ceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 47999999998765 45999999999999999999999999999999999
Q ss_pred C-cccChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCC
Q 011725 359 G-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARG 432 (478)
Q Consensus 359 g-iVpGGGa~el~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~ip~~La~NAG~d~~~i-~kl~~~---~~~~~Gid~~~g 432 (478)
| +|||||++|+++|.+|++|+.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|
T Consensus 402 g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g 481 (545)
T 1a6d_A 402 GKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNN 481 (545)
T ss_dssp CEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTT
T ss_pred CCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccC
Confidence 9 9999999999999999999865 899999999999999999999999999999999 999863 346899999999
Q ss_pred cccccccCCcccchHhHHHHHHhhh-----Hhhhccccc
Q 011725 433 LYVQVWGCRSTETCTIRICKGHKYD-----FIEECNLVH 466 (478)
Q Consensus 433 ~~~dm~~~gI~Dp~~Vk~~~~~~~~-----~~~~~~~~~ 466 (478)
++.||++.|||||+.||++++..+. +|+++.+|.
T Consensus 482 ~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~ 520 (545)
T 1a6d_A 482 GVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIA 520 (545)
T ss_dssp EEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTCCEEC-
T ss_pred ccccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998777664 666777774
No 17
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=9.2e-84 Score=690.80 Aligned_cols=400 Identities=14% Similarity=0.168 Sum_probs=355.8
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~-gi~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++
T Consensus 53 G~tIlk~i~v~hP~akll------~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 126 (518)
T 3iyg_D 53 GATILKQMQVLHPAARML------VELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEI 126 (518)
T ss_pred HHHHHHHcccchHHHHHH------HHHHHHhhhhhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4778999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCCC------hhHHHHHHHHHHhhcc---Ccc-----eeee--cCCcccceeEEEee
Q 011725 84 LDCQARKIT--TFEEIAQVGTTAANGD------GEIGELIAKVFEKGWE---NDL-----ITIF--DRKALYNELNFVKG 145 (478)
Q Consensus 84 L~~~s~~v~--~~~~l~~vA~~s~~~~------~~~~~li~~A~~~vg~---~~~-----I~i~--~g~~~~~~~~l~~G 145 (478)
|+++++|++ +.+.|.++|++|++++ ++||+++++|+.++++ +|. |+|+ .|++. +++++++|
T Consensus 127 L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~-~ds~lv~G 205 (518)
T 3iyg_D 127 LTDMSRPVELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTI-DDCELVEG 205 (518)
T ss_pred HHHheeeCCCCChHHHHHHhHhhhccccchhhHHHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCCh-hhheEecc
Confidence 999999987 7889999999999864 7899999999999985 554 6665 47776 47999999
Q ss_pred EEEeecccCCccccccccceeeecCcEEEEeccc-------------cCCHH-----------HHHHHHHHHHhcCCCEE
Q 011725 146 MKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSN-----------VIRQASLPCMMQGQSLL 201 (478)
Q Consensus 146 ~~~~~g~~~~~~~~~~~~~~~~l~~p~Il~~d~~-------------i~~~~-----------~i~~~le~i~~~g~~lv 201 (478)
|+|+++|.| .| |+ .++||+|++++++ |++++ ++.++++++.+.|+|||
T Consensus 206 ~~~dk~~~~-~m---p~----~i~n~kIlll~~~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lv 277 (518)
T 3iyg_D 206 LVLTQKVAN-SG---IT----RVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVL 277 (518)
T ss_pred EEEeccccc-CC---Cc----cccCceEEEEEeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 999999998 33 22 3566777666654 44554 46788999999999999
Q ss_pred EE-----ecCcchhHHHHHHHhccCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccccceE
Q 011725 202 VV-----AEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRV 276 (478)
Q Consensus 202 Ii-----~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~a~~v 276 (478)
|+ +++|+++++++|..| +|+|||+|+ +.+|+|||++|||+++++ ++++++++||+|++|
T Consensus 278 i~~k~i~~~~I~~~Al~~L~~~------~I~av~~~~-----~~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v 341 (518)
T 3iyg_D 278 LIQKSILRDALSDLALHFLNKM------KIMVVKDIE-----REDIEFICKTIGTKPVAH-----VDQFTADMLGSAELA 341 (518)
T ss_pred EEeccccccCcCHHHHHHHHHc------CcEEEecCC-----HHHHHHHHHHhCCEEecc-----cccCCHHHCCcCcEE
Confidence 99 799999999999975 489999995 557999999999999997 899999999999999
Q ss_pred EE---eC-ceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHH
Q 011725 277 IA---TM-DNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAV 352 (478)
Q Consensus 277 ~i---~~-~~~~~i~g~~~~~~i~~r~~~l~~~l~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~er~l~DAl~~~ 352 (478)
++ ++ ++++||+||++. +++|||+|||+|+++++|+||++|||||++
T Consensus 342 ~~~~~g~~~~~~~~~g~~~~------------------------------~~~~tI~lrG~te~~l~E~kr~l~DAl~~~ 391 (518)
T 3iyg_D 342 EEVSLNGSGKLIKITGCASP------------------------------GKTVTIVVRGSNKLVIEEAERSIHDALCVI 391 (518)
T ss_pred EEEEeCCCceEEEEECCCCC------------------------------CceEEEEECCCCHHHHHHHHHHHHHHHHHH
Confidence 75 45 689999998651 367999999999999999999999999999
Q ss_pred HHHHhcC-cccChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCee
Q 011725 353 QAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLG 426 (478)
Q Consensus 353 k~a~~~g-iVpGGGa~el~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~ip~~La~NAG~d~~~i-~kl~~~---~~~~~G 426 (478)
|+++++| +|||||++|+++|.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|
T Consensus 392 r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G 471 (518)
T 3iyg_D 392 RCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTG 471 (518)
T ss_pred HHHHhCCCEeecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCcee
Confidence 9999998 9999999999999999999875 899999999999999999999999999999999 999873 456799
Q ss_pred EeCCCCcccccccCCcccchHhHHHHHHhhh-----Hhhhcccc
Q 011725 427 YNPARGLYVQVWGCRSTETCTIRICKGHKYD-----FIEECNLV 465 (478)
Q Consensus 427 id~~~g~~~dm~~~gI~Dp~~Vk~~~~~~~~-----~~~~~~~~ 465 (478)
||+.+|++.||++.|||||++||++++..++ +|++++++
T Consensus 472 ~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii 515 (518)
T 3iyg_D 472 INVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVV 515 (518)
T ss_pred EeCCCCcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhhcceE
Confidence 9999999999999999999999998877554 56677765
No 18
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=3.8e-84 Score=697.32 Aligned_cols=401 Identities=17% Similarity=0.215 Sum_probs=365.9
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~-gi~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++
T Consensus 63 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 136 (543)
T 1a6d_B 63 GVTILKEMDVEHPAAKMM------VEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRV 136 (543)
T ss_dssp HHHHHHHSCCCSHHHHHH------HHHHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccchHHHHH------HHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4778999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCC--HHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC--cc-------eeee--cCCcccceeEEEe
Q 011725 84 LDCQARKITT--FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN--DL-------ITIF--DRKALYNELNFVK 144 (478)
Q Consensus 84 L~~~s~~v~~--~~~l~~vA~~s~~------~~~~~~~li~~A~~~vg~~--~~-------I~i~--~g~~~~~~~~l~~ 144 (478)
|+++++|++. .++|.++|+||++ +++.|++++++|+.+++++ |. |+|+ +|+++. ++++++
T Consensus 137 L~~~a~~v~~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~-ds~lv~ 215 (543)
T 1a6d_B 137 IDEISTKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAID-DTQLIN 215 (543)
T ss_dssp HHHHCEECCTTHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGG-GCEEES
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCcc-ceeEEc
Confidence 9999999873 7899999997754 3678999999999999876 53 7777 788885 689999
Q ss_pred eEEEeecccCCccccccccceeeecCcEEEEeccc-------------cCCHHHH-----------HHHHHHHHhcCCCE
Q 011725 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSL 200 (478)
Q Consensus 145 G~~~~~g~~~~~~~~~~~~~~~~l~~p~Il~~d~~-------------i~~~~~i-----------~~~le~i~~~g~~l 200 (478)
||+|+++|.||||+ ..++||+|+++|++ |++++++ .++++++.++|+||
T Consensus 216 G~v~dk~~~~~~m~-------~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~l 288 (543)
T 1a6d_B 216 GIIVDKEKVHPGMP-------DVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANV 288 (543)
T ss_dssp EEEESCCCSSTTSC-------SEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred cEEEecCCCCCCCc-------ceecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 99999999999983 26899999999998 7777665 78899999999999
Q ss_pred EEEecCcchhHHHHHHHhccCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccccceEEE--
Q 011725 201 LVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA-- 278 (478)
Q Consensus 201 vIi~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~a~~v~i-- 278 (478)
||++++|+++++++|..|+ |++|++. ++++|+|||++|||+++++ ++++++++||+|++|++
T Consensus 289 vi~~~~I~~~al~~L~~~~------I~av~~v-----~k~~le~ia~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ 352 (543)
T 1a6d_B 289 VITQKGIDDMAQHYLSRAG------IYAVRRV-----KKSDMDKLAKATGASIVST-----IDEISSSDLGTAERVEQVK 352 (543)
T ss_dssp EEESSCBCHHHHHHHHHTT------CEEECSC-----CHHHHHHHHHHHTCCEESC-----GGGCCGGGCEEEEEEEEEE
T ss_pred EEECCCcCHHHHHHHHHCC------eeEeccC-----CHHHHHHHHHHhCCceecc-----cccCCHHHCCCceEEEEEE
Confidence 9999999999999999864 8899877 6888999999999999996 89999999999999985
Q ss_pred -eCceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHh
Q 011725 279 -TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE 357 (478)
Q Consensus 279 -~~~~~~~i~g~~~~~~i~~r~~~l~~~l~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~er~l~DAl~~~k~a~~ 357 (478)
++++|+|++||+++ ++|||+|||+|+++++|+||++|||||++|++++
T Consensus 353 ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~ 401 (543)
T 1a6d_B 353 VGEDYMTFVTGCKNP-------------------------------KAVSILVRGETEHVVDEMERSITDSLHVVASALE 401 (543)
T ss_dssp ETTEEEEEEEEESSS-------------------------------SCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCceEEEEecCCCC-------------------------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58999999999865 4599999999999999999999999999999999
Q ss_pred cC-cccChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCC
Q 011725 358 EG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR 431 (478)
Q Consensus 358 ~g-iVpGGGa~el~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~ip~~La~NAG~d~~~i-~kl~~~---~~~~~Gid~~~ 431 (478)
+| +|||||++|+++|.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+
T Consensus 402 ~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~ 481 (543)
T 1a6d_B 402 DGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFT 481 (543)
T ss_dssp HCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTT
T ss_pred CCCccCCccHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCC
Confidence 99 9999999999999999999864 899999999999999999999999999999999 999863 44689999999
Q ss_pred CcccccccCCcccchHhHHHHHHhhh-----Hhhhccccc
Q 011725 432 GLYVQVWGCRSTETCTIRICKGHKYD-----FIEECNLVH 466 (478)
Q Consensus 432 g~~~dm~~~gI~Dp~~Vk~~~~~~~~-----~~~~~~~~~ 466 (478)
|++.||++.|||||+.||++++..+. +|+++.+|.
T Consensus 482 g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~ 521 (543)
T 1a6d_B 482 GEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDVIA 521 (543)
T ss_dssp TEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHEEEEEC
T ss_pred CcccchhhcCceecHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998776654 666777774
No 19
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.2e-83 Score=684.52 Aligned_cols=403 Identities=11% Similarity=0.139 Sum_probs=359.1
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~-gi~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|+++||+||++ + ++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++
T Consensus 51 G~tIlk~i~v~hP~Akll--~----e~a~~qd~e~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 124 (515)
T 3iyg_G 51 GNAILREIQVQHPAAKSM--I----EISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMIST 124 (515)
T ss_pred HHHHHHhcccCCHHHHHH--H----HHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4 777999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC--c--------ceeee--cCCcccceeEEE
Q 011725 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN--D--------LITIF--DRKALYNELNFV 143 (478)
Q Consensus 84 L~~~s~~v~--~~~~l~~vA~~s~~~------~~~~~~li~~A~~~vg~~--~--------~I~i~--~g~~~~~~~~l~ 143 (478)
|+++++|++ +.+.|.++|++|+++ .+.+++++++|+..+.++ + .|.|+ +|+++. +++++
T Consensus 125 L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~-ds~lv 203 (515)
T 3iyg_G 125 LKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIE-DSCVL 203 (515)
T ss_pred HHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcc-cceEE
Confidence 999999886 478999999999864 245778999999988632 2 14454 688885 79999
Q ss_pred eeEEEeecccCCccccccccceeeecCcEEEEecc-------------ccCCHHHHHHHHH-----------HHHhcCCC
Q 011725 144 KGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT-------------KISNSNVIRQASL-----------PCMMQGQS 199 (478)
Q Consensus 144 ~G~~~~~g~~~~~~~~~~~~~~~~l~~p~Il~~d~-------------~i~~~~~i~~~le-----------~i~~~g~~ 199 (478)
+||+|+++|.||.|+ .+++||+|+++|+ +|++++++.++++ ++.+.|.+
T Consensus 204 ~G~v~dk~~~~~~m~-------~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~ 276 (515)
T 3iyg_G 204 RGVMINKDVTHPRMR-------RYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPD 276 (515)
T ss_pred eeEEEeCCCCCCCCc-------ceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999763 4799999999998 5778888888776 88899988
Q ss_pred EEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccc-cceEEE
Q 011725 200 LLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS-CKRVIA 278 (478)
Q Consensus 200 lvIi~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~-a~~v~i 278 (478)
|||++++|++.++++|.. .+|+++++. ++++|+|||++|||+++++ ++++++++||+ |+.|++
T Consensus 277 vIi~~~~I~~~al~~L~~------~~I~av~~~-----~k~~leria~~tGa~ii~~-----l~~l~~~~LG~~a~~v~~ 340 (515)
T 3iyg_G 277 VVITEKGISDLAQHYLMR------ANITAIRRV-----RKTDNNRIARACGARIVSR-----PEELREEDVGTGAGLLEI 340 (515)
T ss_pred EEEECCccCHHHHHHHHH------CCceeeccC-----CHHHHHHHHHHhCCeeecc-----ccccChhhcCCcccEEEE
Confidence 888888999999998875 358898876 6888999999999999997 89999999999 999974
Q ss_pred ---eCceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHH
Q 011725 279 ---TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAA 355 (478)
Q Consensus 279 ---~~~~~~~i~g~~~~~~i~~r~~~l~~~l~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~er~l~DAl~~~k~a 355 (478)
++++|+||+||+++. .|||+|||+|+++++|+||++|||||++|++
T Consensus 341 ~~~g~~~~~~i~g~~~~~-------------------------------~~TIllrG~t~~~l~E~er~i~Dal~~~r~~ 389 (515)
T 3iyg_G 341 KKIGDEYFTFITECKDPK-------------------------------ACTILLRGASKEILSEVERNLQDAMQVCRNV 389 (515)
T ss_pred EEECCceEEEEeCCCCCC-------------------------------eEEEEEcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 567899999998874 4999999999999999999999999999999
Q ss_pred Hhc-CcccChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCeeEe
Q 011725 356 KEE-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYN 428 (478)
Q Consensus 356 ~~~-giVpGGGa~el~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~ip~~La~NAG~d~~~i-~kl~~~----~~~~~Gid 428 (478)
+++ ++|||||++|+++|++|++|+.. +|++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||
T Consensus 390 ~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d 469 (515)
T 3iyg_G 390 LLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVN 469 (515)
T ss_pred hhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeee
Confidence 865 69999999999999999999875 999999999999999999999999999999999 999863 24579999
Q ss_pred CCCCcccccccCCcccchHhHHHHHHhhh-----HhhhcccccCC
Q 011725 429 PARGLYVQVWGCRSTETCTIRICKGHKYD-----FIEECNLVHGG 468 (478)
Q Consensus 429 ~~~g~~~dm~~~gI~Dp~~Vk~~~~~~~~-----~~~~~~~~~~~ 468 (478)
+.+|++.||++.|||||+.||++++..++ +|+++.++.++
T Consensus 470 ~~~g~~~d~~~~gi~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_G 470 GETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGH 514 (515)
T ss_pred CCCCcccccHHcCCEEcHHHHHHHHHHHHHHHHHHHHHHheeecC
Confidence 99999999999999999999998877554 77788888654
No 20
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.8e-83 Score=684.70 Aligned_cols=406 Identities=14% Similarity=0.176 Sum_probs=355.8
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~-gi~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++
T Consensus 53 G~tIlk~i~v~hP~Akll------~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~ 126 (512)
T 3iyg_Q 53 AATILRELEVQHPAAKMI------VMASHMQEQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEI 126 (512)
T ss_pred HHHHHHHcccCCHHHHHH------HHHHHHhhhhhCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4788999999999999999999999999999999 999999999999999999999
Q ss_pred Hhcc----ccccCCHHHHHHHHHHhcCC-----ChhHHHHHHHHHHhhccC-cceeee-------cCCcccceeEEEeeE
Q 011725 84 LDCQ----ARKITTFEEIAQVGTTAANG-----DGEIGELIAKVFEKGWEN-DLITIF-------DRKALYNELNFVKGM 146 (478)
Q Consensus 84 L~~~----s~~v~~~~~l~~vA~~s~~~-----~~~~~~li~~A~~~vg~~-~~I~i~-------~g~~~~~~~~l~~G~ 146 (478)
|+++ +.++++.++|.++|++|+++ +++||+++++|+.+++++ +.|+++ .|+++ +++++++||
T Consensus 127 L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~-~ds~lv~G~ 205 (512)
T 3iyg_Q 127 LPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGV-HSSSVLHGM 205 (512)
T ss_pred HHHhhcccCCCCCCHHHHHHHHHHHhCCCCccchHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCc-ccceEEeeE
Confidence 9998 56777899999999999986 688999999999999876 455543 38887 579999999
Q ss_pred EEeecccCCcccccccc-ceeeecCcE-EEEeccc----cCCHHHHHHH-------HH----HHHhcCCCEEEEecCcch
Q 011725 147 KLEWGLKSPYFFTHKNK-KECVLDGAL-VLIYDTK----ISNSNVIRQA-------SL----PCMMQGQSLLVVAEDVEN 209 (478)
Q Consensus 147 ~~~~g~~~~~~~~~~~~-~~~~l~~p~-Il~~d~~----i~~~~~i~~~-------le----~i~~~g~~lvIi~~~i~~ 209 (478)
+|+++|.| |+++.+. +...+++|+ +..++.+ |++++++.++ ++ ++.++|+||||++++|++
T Consensus 206 ~~dk~~~~--~~~~~~n~kI~ll~~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~ 283 (512)
T 3iyg_Q 206 VFKKETEG--DVTSVKDAKIAVYSCPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVAD 283 (512)
T ss_pred EEecCcCC--CCcccccCceEEEecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccH
Confidence 99999976 6664432 222345554 5555555 7788887776 55 888999999999999999
Q ss_pred hHHHHHHHhccCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccccceEEE---eCceEEEE
Q 011725 210 EVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TMDNVVII 286 (478)
Q Consensus 210 ~al~~l~~n~~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~a~~v~i---~~~~~~~i 286 (478)
.++++|.. .+|++||+|+ +.+|+|||++|||+++++ ++++++++||+|++|++ ++++++++
T Consensus 284 la~~~l~k------~~I~av~~~~-----~~dle~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~~g~~~~~~~ 347 (512)
T 3iyg_Q 284 MALHYANK------YNIMLVRLNS-----KWDLRRLCKTVGATALPR-----LNPPVLEEMGHCDSVYLSEVGDTQVVVF 347 (512)
T ss_pred HHHHHHHH------CCeEEEEeCC-----HHHHHHHHHHhCCEEecc-----cccCCHHHCCcccEEEEEEeCCeEEEEE
Confidence 99886663 4699999995 556999999999999996 89999999999999975 56789999
Q ss_pred cCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhcC-cccChh
Q 011725 287 GGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSG 365 (478)
Q Consensus 287 ~g~~~~~~i~~r~~~l~~~l~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~er~l~DAl~~~k~a~~~g-iVpGGG 365 (478)
.+|+. +|++|||+|||+|+++++|+||++|||||++|+++++| +|||||
T Consensus 348 ~~~~~------------------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGG 397 (512)
T 3iyg_Q 348 KHEKE------------------------------DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGG 397 (512)
T ss_pred EcccC------------------------------CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCc
Confidence 98853 35689999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCC--cccccc
Q 011725 366 VALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARG--LYVQVW 438 (478)
Q Consensus 366 a~el~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~ip~~La~NAG~d~~~i-~kl~~~---~~~~~Gid~~~g--~~~dm~ 438 (478)
++|+++|.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+| ++.||+
T Consensus 398 a~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~ 477 (512)
T 3iyg_Q 398 ATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDML 477 (512)
T ss_pred HHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchH
Confidence 9999999999999875 899999999999999999999999999999999 999873 567899999965 999999
Q ss_pred cCCcccchHhHHHHHHhhh-----Hhhhcccc
Q 011725 439 GCRSTETCTIRICKGHKYD-----FIEECNLV 465 (478)
Q Consensus 439 ~~gI~Dp~~Vk~~~~~~~~-----~~~~~~~~ 465 (478)
+.|||||++||++++..++ +|++++++
T Consensus 478 ~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii 509 (512)
T 3iyg_Q 478 EAGVLDTYLGKYWAIKLATNAAVTVLRVDQII 509 (512)
T ss_pred hccCeEcHHHHHHHHHHHHHHHHHHHhHhHhe
Confidence 9999999999998877554 66677766
No 21
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=5.7e-84 Score=697.70 Aligned_cols=410 Identities=17% Similarity=0.173 Sum_probs=360.3
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~-gi~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++
T Consensus 87 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 160 (562)
T 3p9d_E 87 GATILSQMELDNEIAKLL------VQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISK 160 (562)
T ss_dssp HHHHHHHSCCCSHHHHHH------HHHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCCHHHHHH------HHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 479999999999999999 4778999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCC------HHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC-------cceeee--cCCcccceeEE
Q 011725 84 LDCQARKITT------FEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-------DLITIF--DRKALYNELNF 142 (478)
Q Consensus 84 L~~~s~~v~~------~~~l~~vA~~s~~~------~~~~~~li~~A~~~vg~~-------~~I~i~--~g~~~~~~~~l 142 (478)
|+++++|+++ .+.|.++|++|+++ .+.|+++++||+.++.+. +.|+|+ .|+++. ++++
T Consensus 161 L~~~s~~v~~~~~~~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~-ds~l 239 (562)
T 3p9d_E 161 LEETCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSIS-DSKL 239 (562)
T ss_dssp TTTTTSSSSBCCCSSCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGG-GCEE
T ss_pred HHHhccCcCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChh-hhce
Confidence 9999998863 26899999999974 357999999999988652 235565 588886 5899
Q ss_pred EeeEEEeecccCCccccccccceeeecCcEEEEeccc-------------cCCHHH-----------HHHHHHHHHhcCC
Q 011725 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNV-----------IRQASLPCMMQGQ 198 (478)
Q Consensus 143 ~~G~~~~~g~~~~~~~~~~~~~~~~l~~p~Il~~d~~-------------i~~~~~-----------i~~~le~i~~~g~ 198 (478)
++||+|+++|.||||+++.+ ....+++|+|++++++ |+++++ +.++++++.++|+
T Consensus 240 veGmv~dk~~~sp~m~~~~~-~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~ 318 (562)
T 3p9d_E 240 INGVILDKDFSHPQMPKCVL-PKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGA 318 (562)
T ss_dssp ESSEEESSCCCTTSCCC------TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred eeeEEEecCCCCCCcCcccc-cccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999987541 1112467777776653 555555 6788999999999
Q ss_pred CEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccccceEEE
Q 011725 199 SLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA 278 (478)
Q Consensus 199 ~lvIi~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~a~~v~i 278 (478)
||||++++|+++++++|..|+ +.+++++ ++++|+|||++|||+++++ ++++++++||+|++|++
T Consensus 319 ~vvI~~~~I~~~Al~~L~~~~------I~~v~~v-----~k~~le~ia~~TGa~iis~-----l~~l~~~~LG~a~~v~~ 382 (562)
T 3p9d_E 319 DVVICQWGFDDEANHLLLQND------LPAVRWV-----GGQELEHIAISTNGRIVPR-----FQDLSKDKLGTCSRIYE 382 (562)
T ss_dssp SCCEECSSCCSHHHHHHHTTT------CCCEECC-----CTTTHHHHHHHHCCCEEES-----SSCCCTTSCEECSCEEE
T ss_pred cEEEEeCCCCHHHHHHHHHCC------CEEEecc-----CHHHHHHHHHHhCCEEEec-----cccCCHHHCCcceEEEE
Confidence 999999999999999999876 5578888 4778999999999999996 89999999999999987
Q ss_pred -----eCceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHH
Q 011725 279 -----TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQ 353 (478)
Q Consensus 279 -----~~~~~~~i~g~~~~~~i~~r~~~l~~~l~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~er~l~DAl~~~k 353 (478)
++++|+||+||+++. .|||+|||+|+++++|+||++|||||++|
T Consensus 383 ~~ig~~~~~~~~i~g~~~~~-------------------------------~~TIllrG~te~~l~E~kr~i~DAL~~~r 431 (562)
T 3p9d_E 383 QEFGTTKDRMLIIEQSKETK-------------------------------TVTCFVRGSNKMIVDEAERALHDSLCVVR 431 (562)
T ss_dssp ECCSSSSCCEEEECCCSCCS-------------------------------CCEEEEECTTTTTHHHHTHHHHHHHHHHH
T ss_pred EEeccCCceEEEEecCCCCC-------------------------------eEEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 368999999998764 48999999999999999999999999999
Q ss_pred HHHhcC-cccChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCee
Q 011725 354 AAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLG 426 (478)
Q Consensus 354 ~a~~~g-iVpGGGa~el~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~ip~~La~NAG~d~~~i-~kl~~~----~~~~~G 426 (478)
+++++| +|||||++|+++|++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|
T Consensus 432 ~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G 511 (562)
T 3p9d_E 432 NLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIG 511 (562)
T ss_dssp HHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBC
T ss_pred HHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCcee
Confidence 999999 9999999999999999999775 899999999999999999999999999999999 999863 456899
Q ss_pred EeCCCCcccccccCCcccchHhHHHHHHhh-----hHhhhcccccCCC
Q 011725 427 YNPARGLYVQVWGCRSTETCTIRICKGHKY-----DFIEECNLVHGGS 469 (478)
Q Consensus 427 id~~~g~~~dm~~~gI~Dp~~Vk~~~~~~~-----~~~~~~~~~~~~~ 469 (478)
||+.+|++.||++.|||||++||++++..+ .+|+++++|...+
T Consensus 512 ~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~ 559 (562)
T 3p9d_E 512 VDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKIDNVIISGK 559 (562)
T ss_dssp CBTTTTBCCBTTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEECCC
T ss_pred EecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999887744 4677888886544
No 22
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.4e-82 Score=681.04 Aligned_cols=401 Identities=17% Similarity=0.230 Sum_probs=351.4
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~-gi~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++
T Consensus 52 G~tIlk~i~v~hp~akll------~~~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 125 (517)
T 3iyg_Z 52 GNVLLHEMQIQHPTASLI------AKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQF 125 (517)
T ss_pred HHHHHHHccCcCHHHHHH------HHHHHHHHHHhCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 479999999999999999 4778999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC-CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccCc------ceeee--cCCcccceeEEEeeEEE
Q 011725 84 LDCQARKIT-TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEND------LITIF--DRKALYNELNFVKGMKL 148 (478)
Q Consensus 84 L~~~s~~v~-~~~~l~~vA~~s~~~------~~~~~~li~~A~~~vg~~~------~I~i~--~g~~~~~~~~l~~G~~~ 148 (478)
|+++++|++ +.+.|.++|+||+++ .+.|+++++||+..+.+.+ .|.|. .|++. +++++++||+|
T Consensus 126 L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~-~ds~lv~G~v~ 204 (517)
T 3iyg_Z 126 LEQVKVSKEMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSE-TDTSLIRGLVL 204 (517)
T ss_pred HHhhCcCCCCCHHHHHHHHHHHhccccchhHHHHHHHHHHHHhheeccCCCcCChhHheeeeecCCCc-cccceEeeEEE
Confidence 999999987 788999999999874 3578999999998875432 13343 57766 57999999999
Q ss_pred eecccCCccccccccceeeecCcEEEEeccccC-------------CHHHHH-----------HHHHHHHh--------c
Q 011725 149 EWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSNVIR-----------QASLPCMM--------Q 196 (478)
Q Consensus 149 ~~g~~~~~~~~~~~~~~~~l~~p~Il~~d~~i~-------------~~~~i~-----------~~le~i~~--------~ 196 (478)
+++|.||+|+ .+++||+|+++|++|+ +++++. ..++.+.. .
T Consensus 205 dk~~~~p~m~-------~~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~ 277 (517)
T 3iyg_Z 205 DHGARHPDMK-------KRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDS 277 (517)
T ss_pred eccCCCCCcc-------ccccCCeEEEecccccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Confidence 9999999873 3799999999998753 333332 23444433 3
Q ss_pred CCCEEEEe-cCcchhHHHHHHHhccCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCC-ccccc
Q 011725 197 GQSLLVVA-EDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLK-LGSCK 274 (478)
Q Consensus 197 g~~lvIi~-~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~-LG~a~ 274 (478)
++|+||++ ++|+++++++|..+ +|++++++ ++++|+|||++|||+++++ ++++++++ ||+|+
T Consensus 278 ~~~lvIi~~~~I~d~al~~L~~~------gI~~v~~v-----~~~~leria~~tGa~iv~~-----l~~l~~~~~LG~a~ 341 (517)
T 3iyg_Z 278 DKGFVVINQKGIDPFSLDALAKE------GIIALRRA-----KRRNMERLTLACGGIALNS-----LDDLNPDCLLGHAG 341 (517)
T ss_pred CCceEEEecccCCHHHHHHHHHC------CCEEEEec-----CHHHHHHHHHHhCCEEecc-----hhhCcccccCCcce
Confidence 56777665 89999999999864 48899987 4778999999999999996 89999999 99999
Q ss_pred eE---EEeCceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHH
Q 011725 275 RV---IATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHA 351 (478)
Q Consensus 275 ~v---~i~~~~~~~i~g~~~~~~i~~r~~~l~~~l~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~er~l~DAl~~ 351 (478)
| .+++++++|++||++++. |||+|||+|+++++|+||++|||||+
T Consensus 342 -v~e~~ig~~~~~~~~g~~~~~~-------------------------------~TI~lrG~t~~~l~E~kr~l~DAl~~ 389 (517)
T 3iyg_Z 342 -VYEYTLGEEKFTFIEKCNNPRS-------------------------------VTLLIKGPNKHTLTQIKDAIRDGLRA 389 (517)
T ss_pred -EEEEEEcCceEEEEeCCCCchh-------------------------------heeeecCCcHHHHHHHHHHHHHHHHH
Confidence 9 578999999999988764 89999999999999999999999999
Q ss_pred HHHHHhcC-cccChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCe
Q 011725 352 VQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDL 425 (478)
Q Consensus 352 ~k~a~~~g-iVpGGGa~el~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~ip~~La~NAG~d~~~i-~kl~~~---~~~~~ 425 (478)
+|+++++| +|||||++|+++|++|++|+.. ++++|+|+++|++||+.+|++||+|||+|+.++ .+|++. ++.++
T Consensus 390 ~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~ 469 (517)
T 3iyg_Z 390 VKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLV 469 (517)
T ss_pred HHHHHhcceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcE
Confidence 99999999 9999999999999999999885 999999999999999999999999999999999 999873 45689
Q ss_pred eEeCCCCcccccccCCcccchHhHHHHHHhhh-----HhhhcccccC
Q 011725 426 GYNPARGLYVQVWGCRSTETCTIRICKGHKYD-----FIEECNLVHG 467 (478)
Q Consensus 426 Gid~~~g~~~dm~~~gI~Dp~~Vk~~~~~~~~-----~~~~~~~~~~ 467 (478)
|||+.+|++.||++.|||||++||++++..++ +|++++++..
T Consensus 470 G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 516 (517)
T 3iyg_Z 470 GVDLNTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLVDEIMRA 516 (517)
T ss_pred EEeCCCCcccchhhccCeecHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999998877665 6667777643
No 23
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=4e-84 Score=697.33 Aligned_cols=403 Identities=15% Similarity=0.149 Sum_probs=358.6
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~-gi~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++
T Consensus 66 G~TIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~ 139 (550)
T 3p9d_G 66 GATILKLLDVVHPAAKTL------VDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEK 139 (550)
T ss_dssp HHHHTTTSCCCSHHHHHH------HHHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCCHHHHHH------HHHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4788999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--C---HHHHHHHHHHhcC------CChhHHHHHHHHHHhhcc-C------cceeeecCCcccceeEEEee
Q 011725 84 LDCQARKIT--T---FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWE-N------DLITIFDRKALYNELNFVKG 145 (478)
Q Consensus 84 L~~~s~~v~--~---~~~l~~vA~~s~~------~~~~~~~li~~A~~~vg~-~------~~I~i~~g~~~~~~~~l~~G 145 (478)
|+++++|++ + .+.|.++|+||++ ++++||++++||+.++++ + +.++++ |+++. ++++++|
T Consensus 140 L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv~-Gg~~~-ds~lv~G 217 (550)
T 3p9d_G 140 INELAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKIP-GGAME-ESLFING 217 (550)
T ss_dssp HHHSEECCCCC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBCC-SSCGG-GCCCCSS
T ss_pred HHHhcccCCCCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHHHHHhCccccCchheeEEEec-CCCcc-ceeEEee
Confidence 999999986 3 6789999998864 368899999999999984 3 344444 88886 4699999
Q ss_pred EEEeecccCCccccccccceeeecCcEEEEeccc-------------cCCHHHHHH-----------HHHHHHhcCCCEE
Q 011725 146 MKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVIRQ-----------ASLPCMMQGQSLL 201 (478)
Q Consensus 146 ~~~~~g~~~~~~~~~~~~~~~~l~~p~Il~~d~~-------------i~~~~~i~~-----------~le~i~~~g~~lv 201 (478)
|+|+++|.||||++.|+ .++||+|+++|++ |++++++.+ +++++.++|++||
T Consensus 218 ~~~dk~~~s~yf~~~~~----~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vV 293 (550)
T 3p9d_G 218 VAFKKTFSYAGFEQQPK----KFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIV 293 (550)
T ss_dssp EEECCCSSCTTCSCSCS----CCSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEE
T ss_pred EEEeccccccccccCcc----cccCceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999988776 4999999999987 456655544 6778999999999
Q ss_pred EEecCcchhHHHHHHHhccCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccccceEEE---
Q 011725 202 VVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA--- 278 (478)
Q Consensus 202 Ii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~a~~v~i--- 278 (478)
|++++|++.++++|.. .+|+++++. ++++|+|||++|||+++++ ++++++++||+|++|++
T Consensus 294 i~~~~I~dla~~~L~~------~gI~~v~~v-----~k~~lerIa~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~i 357 (550)
T 3p9d_G 294 LSKLPIGDLATQFFAD------RNIFCAGRV-----SADDMNRVIQAVGGSIQST-----TSDIKPEHLGTCALFEEMQI 357 (550)
T ss_dssp EESSCCCHHHHHTTGG------GTCEEEECC-----CTTHHHHHHHHTCCCCBSS-----GGGCCGGGCCCCSBCCCCCC
T ss_pred EECCCccHHHHHHHHH------cCCccccCc-----CHHHHHHHHHHhCCceecc-----hhhCCHHHcCCceEEEEEEe
Confidence 9999999988876553 358889887 5778999999999999996 89999999999999975
Q ss_pred eCceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhc
Q 011725 279 TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE 358 (478)
Q Consensus 279 ~~~~~~~i~g~~~~~~i~~r~~~l~~~l~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~er~l~DAl~~~k~a~~~ 358 (478)
++++++++.||+++ ++|||+|||+|+++++|+||++|||||++|+++++
T Consensus 358 g~e~~~~~~g~~~~-------------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~ 406 (550)
T 3p9d_G 358 GSERYNLFQGCPQA-------------------------------KTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQN 406 (550)
T ss_dssp SSSCCEEEBCCTTC-------------------------------CCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCeEEEEEecCCCC-------------------------------ceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhc
Confidence 78899999999765 35999999999999999999999999999999999
Q ss_pred C-cccChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCC
Q 011725 359 G-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARG 432 (478)
Q Consensus 359 g-iVpGGGa~el~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~ip~~La~NAG~d~~~i-~kl~~~---~~~~~Gid~~~g 432 (478)
| +|||||++|+++|.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+|
T Consensus 407 g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g 486 (550)
T 3p9d_G 407 KLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETE 486 (550)
T ss_dssp CCEEETTTHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSS
T ss_pred CCcccCCCHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCC
Confidence 9 9999999999999999999765 899999999999999999999999999999999 999873 456899999999
Q ss_pred cccccccCCcccchHhHHHHHHhhh-----Hhhhccccc
Q 011725 433 LYVQVWGCRSTETCTIRICKGHKYD-----FIEECNLVH 466 (478)
Q Consensus 433 ~~~dm~~~gI~Dp~~Vk~~~~~~~~-----~~~~~~~~~ 466 (478)
++.||+++|||||++||++++..++ +|+++.+|.
T Consensus 487 ~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~ 525 (550)
T 3p9d_G 487 NIGDNFAKFVWEPALVKINALNSATEATNLILSVDETIT 525 (550)
T ss_dssp SBCCHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEC
T ss_pred cccchHhccCEecHHHHHHHHHHHHHHHHHHHhHHHHhh
Confidence 9999999999999999998877544 666777773
No 24
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=8.8e-84 Score=692.61 Aligned_cols=400 Identities=18% Similarity=0.200 Sum_probs=361.2
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC--CCChHHHHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG--RANLTGLTQGFRMAADAVVR 82 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~--gi~P~~I~~G~~~A~~~~~~ 82 (478)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.+++
T Consensus 60 G~tIlk~i~~~hP~Akll------~e~a~~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~ 133 (527)
T 3p9d_B 60 GATILKSIPLDNPAAKVL------VNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALD 133 (527)
T ss_dssp HHHHHHTCCCCCHHHHHH------HHHHHHHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCHHHHHH------HHHHHHhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4788999999999999999999999999999996 99999999999999999999
Q ss_pred HHhccccccCC-----HHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccCc---ceeee--cCCcccceeEEEeeE
Q 011725 83 NLDCQARKITT-----FEEIAQVGTTAANG------DGEIGELIAKVFEKGWEND---LITIF--DRKALYNELNFVKGM 146 (478)
Q Consensus 83 ~L~~~s~~v~~-----~~~l~~vA~~s~~~------~~~~~~li~~A~~~vg~~~---~I~i~--~g~~~~~~~~l~~G~ 146 (478)
+|+++++++++ .++|.+||++|+++ +++||+++++|+.++++++ .|+|+ .|+++. ++++++||
T Consensus 134 ~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~-ds~lv~G~ 212 (527)
T 3p9d_B 134 ALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLS-DSFLDEGF 212 (527)
T ss_dssp HHHHTCBCCCCCHHHHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSS-CCCEESSC
T ss_pred HHHHhCccCCCcchhhHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCcc-ccEEEEeE
Confidence 99999999875 68999999999975 5789999999999999887 67877 477764 68999999
Q ss_pred EEeecccCCccccccccceeeecCcEEEEeccc--------------cCCHHHH-----------HHHHHHHHhcCCCEE
Q 011725 147 KLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK--------------ISNSNVI-----------RQASLPCMMQGQSLL 201 (478)
Q Consensus 147 ~~~~g~~~~~~~~~~~~~~~~l~~p~Il~~d~~--------------i~~~~~i-----------~~~le~i~~~g~~lv 201 (478)
+||++|.||| |+ .++||+|++++++ |++++++ ++.++++.++|+|||
T Consensus 213 ~~dk~~~~~~----p~----~~~n~kIlll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vv 284 (527)
T 3p9d_B 213 ILAKKFGNNQ----PK----RIENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTF 284 (527)
T ss_dssp CCSCCCSSSC----CS----CCSSCEEEEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEE
T ss_pred EEecccCCCC----Ce----eeecceEEEeccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 9999999997 44 4689999998764 3445444 578899999999999
Q ss_pred EEecCcchhHHHHHHHhccCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccccceEE---E
Q 011725 202 VVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---A 278 (478)
Q Consensus 202 Ii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~a~~v~---i 278 (478)
|++++|++.++++|..|+ |++||+++ +.+|+|||++|||+++++ ++++++++||+|++|+ +
T Consensus 285 i~~~~I~~~al~~L~~~~------i~av~~~~-----~~dle~ia~~tGa~iv~~-----~~~~~~~~LG~a~~v~~~~i 348 (527)
T 3p9d_B 285 INRQLIYDYPEQLFTDLG------INSIEHAD-----FEGVERLALVTGGEVVST-----FDEPSKCKLGECDVIEEIML 348 (527)
T ss_dssp ESSCCCTTTHHHHHHHTC------BCCCCCCH-----HHHHHHHHHHTCCCCCST-----TSCCTTSCEECSBCCBCCCS
T ss_pred EECCCCCHHHHHHHHHCC------CEEEecCC-----HHHHHHHHHHhCCEEecc-----hhhCCHHHCCCCcEEEEEEe
Confidence 999999999999999864 88999994 567999999999999997 7899999999999997 6
Q ss_pred eCceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHhc
Q 011725 279 TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE 358 (478)
Q Consensus 279 ~~~~~~~i~g~~~~~~i~~r~~~l~~~l~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~er~l~DAl~~~k~a~~~ 358 (478)
++++++++.||+++ ++|||+|||+|+.+++|+||++|||||++|+++++
T Consensus 349 g~~~~~~~~g~~~~-------------------------------~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~ 397 (527)
T 3p9d_B 349 GEQPFLKFSGCKAG-------------------------------EACTIVLRGATDQTLDEAERSLHDALSVLSQTTKE 397 (527)
T ss_dssp SSCCBCCBCSSCCS-------------------------------CCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHC
T ss_pred cceEEEEEECCCCC-------------------------------CEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 88999999998754 56999999999999999999999999999999999
Q ss_pred C-cccChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCC
Q 011725 359 G-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARG 432 (478)
Q Consensus 359 g-iVpGGGa~el~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~ip~~La~NAG~d~~~i-~kl~~~---~~~~~Gid~~~g 432 (478)
| +|||||++|+++|.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+|
T Consensus 398 g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g 477 (527)
T 3p9d_B 398 TRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNG 477 (527)
T ss_dssp CCEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSST
T ss_pred CCcccCCcHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCC
Confidence 9 9999999999999999999875 899999999999999999999999999999999 999873 456899999999
Q ss_pred cccccccCCcccchHhHHHHHHhhh-----Hhhhccccc
Q 011725 433 LYVQVWGCRSTETCTIRICKGHKYD-----FIEECNLVH 466 (478)
Q Consensus 433 ~~~dm~~~gI~Dp~~Vk~~~~~~~~-----~~~~~~~~~ 466 (478)
++.||++.|||||++||++++..++ +|+++.+|.
T Consensus 478 ~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~ 516 (527)
T 3p9d_B 478 TIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNIIR 516 (527)
T ss_dssp TCCCHHHHTCEEETTHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred CCcchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHHHh
Confidence 9999999999999999998877554 667777773
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=2.1e-82 Score=684.19 Aligned_cols=406 Identities=16% Similarity=0.207 Sum_probs=350.4
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~-gi~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|+++||+||++ + ++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++
T Consensus 59 G~tIlk~i~v~hP~akll--~----e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 132 (546)
T 3p9d_F 59 GKVLLTEMQIQSPTAVLI--A----RAAAAQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKF 132 (546)
T ss_dssp HHHHHHTSCCCCHHHHHH--H----HHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCcCHHHHHH--H----HHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4 788999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC----CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC-c------ceeee--cCCcccceeEEEe
Q 011725 84 LDCQARKIT----TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-D------LITIF--DRKALYNELNFVK 144 (478)
Q Consensus 84 L~~~s~~v~----~~~~l~~vA~~s~~~------~~~~~~li~~A~~~vg~~-~------~I~i~--~g~~~~~~~~l~~ 144 (478)
|+++++|++ +.+.|.++|+||+++ .+.|+++++||+..+.+. + .|.+. .|++. +++++++
T Consensus 133 L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~-~ds~lv~ 211 (546)
T 3p9d_F 133 LDEFKISKTNLSNDREFLLQVARSSLLTKVDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSP-KDTTFIK 211 (546)
T ss_dssp HHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCT-TTCCCCS
T ss_pred HHHhhccccccccCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCc-cccEEEe
Confidence 999999884 678999999999974 467999999999988631 1 24444 57766 4799999
Q ss_pred eEEEeecccCCccccccccceeeecCcEEEEeccccC-------------CHHH-----------HHHHHHHHHh-----
Q 011725 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSNV-----------IRQASLPCMM----- 195 (478)
Q Consensus 145 G~~~~~g~~~~~~~~~~~~~~~~l~~p~Il~~d~~i~-------------~~~~-----------i~~~le~i~~----- 195 (478)
||+|+++|.||+| +.+++||+|+++|++++ ++++ +...++.+..
T Consensus 212 G~v~dk~~~~~~m-------~~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v 284 (546)
T 3p9d_F 212 GLVLDHGGRHPDM-------PTRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEV 284 (546)
T ss_dssp SCEESCCCCSSSS-------CSSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred eEEEecccccccC-------cceecCceEEEecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999976 34799999999997653 2221 2234555544
Q ss_pred ----cCCCEEEE-ecCcchhHHHHHHHhccCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCc
Q 011725 196 ----QGQSLLVV-AEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKL 270 (478)
Q Consensus 196 ----~g~~lvIi-~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~L 270 (478)
+|+|+||+ +++|+++++++|..|+ |+++|++ ++.+|+|||++|||+++++ ++++++++|
T Consensus 285 ~~~~~g~~~vIi~~k~I~~~Al~~L~~~g------I~~vr~v-----~~~~leria~~tGa~ii~~-----l~~l~~~~L 348 (546)
T 3p9d_F 285 CGMDPDKGFVIINQKGIDPMSLDVFAKHN------ILALRRA-----KRRNMERLQLVTGGEAQNS-----VEDLSPQIL 348 (546)
T ss_dssp --------CEEEESSCCCHHHHHHHTTTT------CEEECCC-----CHHHHHHHHHTTTBCCCCC-----CSSCSTTCC
T ss_pred hhhccCCceEEEecCcCcHHHHHHHHHCC------CeeEecC-----CHHHHHHHHHHhCCEEecc-----hhhCCHhHC
Confidence 46775555 5699999999999764 7899987 4667999999999999996 899999999
Q ss_pred cccceE---EEeCceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHH
Q 011725 271 GSCKRV---IATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITN 347 (478)
Q Consensus 271 G~a~~v---~i~~~~~~~i~g~~~~~~i~~r~~~l~~~l~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~er~l~D 347 (478)
|+|++| .+++++|+|++||++++. |||+|||+|+++++|+||++||
T Consensus 349 G~a~~v~~~~ig~~~~~~i~g~~~~~~-------------------------------~tI~lrG~te~~l~E~kr~l~D 397 (546)
T 3p9d_F 349 GFSGLVYQETIGEEKFTYVTENTDPKS-------------------------------CTILIKGSTHYALAQTKDAVRD 397 (546)
T ss_dssp BCCCCBCBCCCSSCCCEECSSCSCCSC-------------------------------EEEECCCSCHHHHHHHHHHHHH
T ss_pred CcccEEEEEEecCceEEEEecCCCCce-------------------------------EEEEECCCCHHHHHHHHHHHHH
Confidence 999999 578999999999988754 9999999999999999999999
Q ss_pred HHHHHHHHHhcC-cccChhHHHHHHHHHHHh---hcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc-
Q 011725 348 ALHAVQAAKEEG-IVPGSGVALLYASKELDK---LQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ- 420 (478)
Q Consensus 348 Al~~~k~a~~~g-iVpGGGa~el~~s~~L~~---~~~~-~~~e~~gi~~~a~AL~~ip~~La~NAG~d~~~i-~kl~~~- 420 (478)
|||++|+++++| +|||||++|+++|.+|++ |+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++.
T Consensus 398 Al~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h 477 (546)
T 3p9d_F 398 GLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDEL 477 (546)
T ss_dssp HHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHH
T ss_pred HHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHh
Confidence 999999999999 999999999999999999 5665 899999999999999999999999999999998 999863
Q ss_pred -------CCCCeeEeCCCCcccccccCCcccchHhHHHHHHhh-----hHhhhcccccCCCcc
Q 011725 421 -------DSSDLGYNPARGLYVQVWGCRSTETCTIRICKGHKY-----DFIEECNLVHGGSSM 471 (478)
Q Consensus 421 -------~~~~~Gid~~~g~~~dm~~~gI~Dp~~Vk~~~~~~~-----~~~~~~~~~~~~~~~ 471 (478)
++.++|||+.+|++.||++.|||||++||++++..+ .+|++++++...+++
T Consensus 478 ~~~~~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~~~~ 540 (546)
T 3p9d_F 478 DDAQDSDETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLCDELLRAGRST 540 (546)
T ss_dssp HHHTTSTTSSCCCCBTTTTBCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCSS
T ss_pred hhhhcccCCceeeEeCCCCeecchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc
Confidence 456799999999999999999999999999887655 477799998665544
No 26
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=3.3e-81 Score=676.96 Aligned_cols=401 Identities=13% Similarity=0.132 Sum_probs=351.3
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhhcccccCCcchhHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011725 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~l~~~~~s~~~a~~Qd~evGDGTTTvvvLa~~Ll~~~~~li~-gi~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|+++||+||++ +++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++
T Consensus 68 G~TIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~ 141 (568)
T 3p9d_H 68 AATMLRELDIVHPAVKVL------VMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKE 141 (568)
T ss_dssp HHHHTTTCCCCCHHHHHH------HHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccCCHHHHHH------HHHHHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4778999999999999999999999999999999 999999999999999999999
Q ss_pred Hhcccccc----CCHHHHHHHHHHhcC-----CChhHHHHHHHHHHhhccC-----c-------ceeee--cCCccccee
Q 011725 84 LDCQARKI----TTFEEIAQVGTTAAN-----GDGEIGELIAKVFEKGWEN-----D-------LITIF--DRKALYNEL 140 (478)
Q Consensus 84 L~~~s~~v----~~~~~l~~vA~~s~~-----~~~~~~~li~~A~~~vg~~-----~-------~I~i~--~g~~~~~~~ 140 (478)
|++++.++ ++.+.|.++|++|++ ++++|++++++|+.+++++ + .|+|+ .|+++. ++
T Consensus 142 L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~-dS 220 (568)
T 3p9d_H 142 LDEMVVGEITDKNDKNELLKMIKPVISSKKYGSEDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLS-NS 220 (568)
T ss_dssp HHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGG-GC
T ss_pred HHHhccccCCCCCCHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcc-hh
Confidence 99999876 567899999999874 3578999999999999874 3 46776 488885 58
Q ss_pred EEEeeEEEeecccCCccccccccceeeec---CcEEEEeccc-------------cCCHHHHHH-----------HHHHH
Q 011725 141 NFVKGMKLEWGLKSPYFFTHKNKKECVLD---GALVLIYDTK-------------ISNSNVIRQ-----------ASLPC 193 (478)
Q Consensus 141 ~l~~G~~~~~g~~~~~~~~~~~~~~~~l~---~p~Il~~d~~-------------i~~~~~i~~-----------~le~i 193 (478)
++++||+|+++|. .| +.+++ ||+|+++|++ |++++++.+ +++++
T Consensus 221 ~lv~G~v~dk~~~--~m-------~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I 291 (568)
T 3p9d_H 221 TVIKGMVFNREPE--GH-------VKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEI 291 (568)
T ss_dssp EEESSCCBSSCBS--SG-------GGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeccEEEeeccc--CC-------cEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999974 23 34677 9999999987 667776654 68889
Q ss_pred HhcCCCEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCcccc
Q 011725 194 MMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSC 273 (478)
Q Consensus 194 ~~~g~~lvIi~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~a 273 (478)
.+.|+||||++++|++.++++|..+ +|++||+|+ +.+|+|||++|||+++++ ++++++++||+|
T Consensus 292 ~~~g~~vvi~~~~I~~~al~~L~~~------gI~av~~v~-----~~~leria~~tGa~ivs~-----l~~l~~~~LG~a 355 (568)
T 3p9d_H 292 ADMGVECIVAGAGVGELALHYLNRY------GILVLKVPS-----KFELRRLCRVCGATPLPR-----LGAPTPEELGLV 355 (568)
T ss_dssp HHTTCCEEEECSCCCHHHHHHHHHH------TCEEECCCC-----HHHHHHHHHHHSCCCCSS-----SSCCCGGGCEEC
T ss_pred HhcCCeEEEECCCcChHHHHHHHHC------CeEEEecCC-----HHHHHHHHHHhCCEEEec-----cccCCHHHCCcc
Confidence 9999999999999999999999875 489999994 667999999999999997 899999999999
Q ss_pred ceEE---EeCceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHHHHHHHHHHHHHHHH
Q 011725 274 KRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALH 350 (478)
Q Consensus 274 ~~v~---i~~~~~~~i~g~~~~~~i~~r~~~l~~~l~~~~s~~l~eRla~l~g~~atI~vrG~t~~~l~E~er~l~DAl~ 350 (478)
++|+ +++++++||+||+. |++++|||+|||+|+++++|+||++|||||
T Consensus 356 ~~v~~~~ig~~~~~~~~g~~~-----------------------------l~~~~~TIllrG~t~~~l~E~er~i~DAL~ 406 (568)
T 3p9d_H 356 ETVKTMEIGGDRVTVFKQEQG-----------------------------EISRTSTIILRGATQNNLDDIERAIDDGVA 406 (568)
T ss_dssp SCCCCCEETTEECBCCCCCSS-----------------------------SCCSSCEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecCceEEEEecCCC-----------------------------CCCCeEEEEECCCcHHHHHHHHHHHHHHHH
Confidence 9986 45689999999862 234679999999999999999999999999
Q ss_pred HHHHHHh--c-CcccChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc-----
Q 011725 351 AVQAAKE--E-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----- 420 (478)
Q Consensus 351 ~~k~a~~--~-giVpGGGa~el~~s~~L~~~~~~-~~~e~~gi~~~a~AL~~ip~~La~NAG~d~~~i-~kl~~~----- 420 (478)
++|++++ + ++|||||++|+++|.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++.
T Consensus 407 vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~ 486 (568)
T 3p9d_H 407 AVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTE 486 (568)
T ss_dssp HHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSS
T ss_pred HHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhc
Confidence 9999999 5 59999999999999999999765 899999999999999999999999999999999 999874
Q ss_pred ------CCCCeeEeCCCCc---ccccccCCcccchHhHHHHHHhhh-----Hhhhccccc
Q 011725 421 ------DSSDLGYNPARGL---YVQVWGCRSTETCTIRICKGHKYD-----FIEECNLVH 466 (478)
Q Consensus 421 ------~~~~~Gid~~~g~---~~dm~~~gI~Dp~~Vk~~~~~~~~-----~~~~~~~~~ 466 (478)
+++++|||+.+|+ +.||++.|||||++||++++..++ +|+++.+|-
T Consensus 487 ~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~ 546 (568)
T 3p9d_H 487 PGAVKTDHLYKGVDIDGESDEGVKDIREENIYDMLATKKFAINVATEAATTVLSIDQIIM 546 (568)
T ss_dssp CCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC--------
T ss_pred ccccccCCCceeEcccCCCcccccChHHccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhh
Confidence 2457999999997 999999999999999999998655 677888873
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.1e-50 Score=367.63 Aligned_cols=189 Identities=38% Similarity=0.559 Sum_probs=185.4
Q ss_pred eEEEeeEEEeecccCCccccccccceeeecCcEEEEeccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhHHHHHHHhc
Q 011725 140 LNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDF 219 (478)
Q Consensus 140 ~~l~~G~~~~~g~~~~~~~~~~~~~~~~l~~p~Il~~d~~i~~~~~i~~~le~i~~~g~~lvIi~~~i~~~al~~l~~n~ 219 (478)
+++++||.||+||+||||++++++|.++++||+||++|.||+++++++|+||.+.++|+||+|+++|++++||++|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccccceEEEeCceEEEEcCCCChhhHHHHH
Q 011725 220 TCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERC 299 (478)
Q Consensus 220 ~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~a~~v~i~~~~~~~i~g~~~~~~i~~r~ 299 (478)
++|.++++|||+|+|||+||+.|+|||.+|||++++.+.|+++++++.++||+|++|.+++|+|++++|.+++++|++|+
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccc----HHHHHHHhhhcCCeEEE
Q 011725 300 EQLRSTIKLSTS----DKLKDRLAKLSGGYAVL 328 (478)
Q Consensus 300 ~~l~~~l~~~~s----~~l~eRla~l~g~~atI 328 (478)
++|+++++.++| |||+||||||+||+|+|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999988 99999999999999865
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=1.9e-48 Score=357.93 Aligned_cols=185 Identities=35% Similarity=0.527 Sum_probs=181.2
Q ss_pred EeeEEEeecccCCccccccccceeeecCcEEEEeccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhHHHHHHHhccCC
Q 011725 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCT 222 (478)
Q Consensus 143 ~~G~~~~~g~~~~~~~~~~~~~~~~l~~p~Il~~d~~i~~~~~i~~~le~i~~~g~~lvIi~~~i~~~al~~l~~n~~~~ 222 (478)
.+||.||+||+||||++++++|.++++||+||++|.||+++++++|+||.+.++|+||+|+++|++++||++|+.|+++|
T Consensus 12 ~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg 91 (201)
T 3osx_A 12 SEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRG 91 (201)
T ss_dssp CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHT
T ss_pred ccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccc
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccccceEEEeCceEEEEcCCCChhhHHHHHHHH
Q 011725 223 TEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQL 302 (478)
Q Consensus 223 ~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~a~~v~i~~~~~~~i~g~~~~~~i~~r~~~l 302 (478)
.++|+|||+|+|||+||+.|+|||.+|||++++++.|+++++++.++||+|++|.|++|+|++++|.+++++|++|+++|
T Consensus 92 ~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~qI 171 (201)
T 3osx_A 92 IVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQI 171 (201)
T ss_dssp SCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccc----HHHHHHHhhhcCCeEE
Q 011725 303 RSTIKLSTS----DKLKDRLAKLSGGYAV 327 (478)
Q Consensus 303 ~~~l~~~~s----~~l~eRla~l~g~~at 327 (478)
+++++.++| |||+||||||+||+|+
T Consensus 172 r~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 172 RQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 999999988 9999999999999874
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=6.3e-39 Score=281.47 Aligned_cols=144 Identities=34% Similarity=0.535 Sum_probs=142.1
Q ss_pred eEEEeecccCCccccccccceeeecCcEEEEeccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhHHHHHHHhccCCCC
Q 011725 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTE 224 (478)
Q Consensus 145 G~~~~~g~~~~~~~~~~~~~~~~l~~p~Il~~d~~i~~~~~i~~~le~i~~~g~~lvIi~~~i~~~al~~l~~n~~~~~~ 224 (478)
||.||+||+||||++++++|.++++||+||++|.||++.++++|+||++.++|+||+|+++|++++||++|+.|+++|.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccccceEEEeCceEEEEcC
Q 011725 225 KVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGG 288 (478)
Q Consensus 225 ~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~a~~v~i~~~~~~~i~g 288 (478)
+++|||+|+|||+||+.|+|||.+|||++++++.|+++++++.++||+|++|++++|+|++++|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999976
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.89 E-value=8.1e-23 Score=189.51 Aligned_cols=144 Identities=10% Similarity=0.167 Sum_probs=120.3
Q ss_pred eeEEEeeEEEeecccCCccccccccceeeecCcEEEEeccccC-------------CHH-----------HHHHHHHHHH
Q 011725 139 ELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSN-----------VIRQASLPCM 194 (478)
Q Consensus 139 ~~~l~~G~~~~~g~~~~~~~~~~~~~~~~l~~p~Il~~d~~i~-------------~~~-----------~i~~~le~i~ 194 (478)
+|++++|++|++++.+|.|+ ..++||+|++++++++ +++ .+...+++|.
T Consensus 3 dS~lv~Gvvl~k~~~~~~mp-------k~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~ 75 (178)
T 1gml_A 3 DSCVLRGVMINKDVTHPRMR-------RYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDII 75 (178)
T ss_dssp CCSEEEEEEESCCCSSTTSC-------CEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEEEeccccCCCCC-------cccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 68999999999999988763 3689999999998643 222 2456688899
Q ss_pred hcCCCEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccc-c
Q 011725 195 MQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS-C 273 (478)
Q Consensus 195 ~~g~~lvIi~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~-a 273 (478)
+.|.++|+++++|++.++++|..+ +|++++++ ++++|+|||++|||+++++ ++++++++||+ |
T Consensus 76 ~~g~nVVl~~k~I~d~a~~~l~k~------gI~~vr~v-----~~~dleria~atGa~iv~~-----~~~l~~~~LG~~~ 139 (178)
T 1gml_A 76 QLKPDVVITEKGISDLAQHYLMRA------NVTAIRRV-----RKTDNNRIARACGARIVSR-----PEELREDDVGTGA 139 (178)
T ss_dssp TTCCSEEEESSCBCHHHHHHHHHT------TCEEECCC-----CHHHHHHHHHHHCCCEESC-----GGGCCGGGSBCCE
T ss_pred hcCCcEEEECCcccHHHHHHHHHC------CCEEEecC-----CHHHHHHHHHHhCCeEeCC-----hhhCChhhhCCcc
Confidence 999999999999999999988864 48999998 5778999999999999997 89999999999 9
Q ss_pred ceEE---EeCceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHH
Q 011725 274 KRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKA 336 (478)
Q Consensus 274 ~~v~---i~~~~~~~i~g~~~~~~i~~r~~~l~~~l~~~~s~~l~eRla~l~g~~atI~vrG~t~~ 336 (478)
+.|+ +++++++||+||+++++ |||+|||+|.+
T Consensus 140 ~~v~~~~ig~~~~~~~~gc~~~~~-------------------------------~TIllRG~~~~ 174 (178)
T 1gml_A 140 GLLEIKKIGDEYFTFITDCKDPKA-------------------------------CTILLRGASHH 174 (178)
T ss_dssp EEEEEEEETTEEEEEEEEESSTTS-------------------------------CEEEEEC----
T ss_pred cEEEEEEECCeEEEEEECCCCCCE-------------------------------EEEEEECCCcc
Confidence 9987 57899999999987754 89999999864
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.79 E-value=5.8e-19 Score=160.57 Aligned_cols=127 Identities=17% Similarity=0.273 Sum_probs=108.2
Q ss_pred EeeEEEeecccCCccccccccceeeecCcEEEEeccccC-------------CHHH-----------HHHHHHHHHhcCC
Q 011725 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSNV-----------IRQASLPCMMQGQ 198 (478)
Q Consensus 143 ~~G~~~~~g~~~~~~~~~~~~~~~~l~~p~Il~~d~~i~-------------~~~~-----------i~~~le~i~~~g~ 198 (478)
++|++|++++.+|.|++ .++||+|++++++++ ++++ +...+++|.+.|.
T Consensus 1 i~Gvv~~k~~~~~~mpk-------~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPD-------VVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCTTSCS-------EEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCCCCCc-------CcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 47999999999987633 689999999998654 3333 3456888999999
Q ss_pred CEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCccccceEE-
Q 011725 199 SLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI- 277 (478)
Q Consensus 199 ~lvIi~~~i~~~al~~l~~n~~~~~~~i~avk~~~~g~~rk~~le~la~~tGa~ii~~~~~~~~~~~~~~~LG~a~~v~- 277 (478)
++|+++++|++.++++|..+ +|++++++ ++++|+|||++|||+++++ ++++++++||+|+.|+
T Consensus 74 nVVl~~k~I~d~a~~~l~k~------gI~~v~~v-----~~~dleria~atGa~iv~~-----~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKE------GIYAVRRV-----KKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHT------TCEEECSC-----CHHHHHHHHHHHTCCCBSS-----TTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHC------CCEEEccC-----CHHHHHHHHHHhCCeeeCc-----cccCCcccCccceEEEE
Confidence 99999999999999988864 48999998 5778999999999999997 8999999999999996
Q ss_pred --EeCceEEEEcCCCCh
Q 011725 278 --ATMDNVVIIGGSGEL 292 (478)
Q Consensus 278 --i~~~~~~~i~g~~~~ 292 (478)
++++++++|+||++.
T Consensus 138 ~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp EEETTEEEEEEESCC--
T ss_pred EEECCeEEEEEECCCCc
Confidence 578999999999865
Done!