Query 011728
Match_columns 478
No_of_seqs 254 out of 1470
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 04:35:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011728.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011728hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1382 Multiple inositol poly 100.0 4.5E-68 9.8E-73 516.6 36.0 409 27-467 32-446 (467)
2 PF00328 His_Phos_2: Histidine 100.0 1.3E-46 2.9E-51 377.2 28.0 327 60-422 1-347 (347)
3 cd07061 HP_HAP_like Histidine 100.0 2.1E-44 4.5E-49 343.6 23.5 241 60-422 1-242 (242)
4 KOG3720 Lysosomal & prostatic 100.0 1.2E-44 2.6E-49 365.4 22.8 329 55-461 28-383 (411)
5 PRK10173 glucose-1-phosphatase 100.0 2.9E-38 6.3E-43 318.0 28.9 319 55-448 25-410 (413)
6 PRK10172 phosphoanhydride phos 100.0 5.7E-37 1.2E-41 306.5 30.8 334 54-451 27-431 (436)
7 KOG3672 Histidine acid phospha 99.9 8.9E-24 1.9E-28 200.1 13.0 339 55-445 88-462 (487)
8 KOG1057 Arp2/3 complex-interac 98.4 1.2E-06 2.6E-11 91.2 9.1 63 124-187 509-578 (1018)
9 cd07040 HP Histidine phosphata 98.2 3.7E-06 8E-11 73.6 6.6 49 124-181 23-71 (153)
10 cd07067 HP_PGM_like Histidine 95.1 0.053 1.2E-06 47.2 6.1 47 125-180 24-70 (153)
11 COG0406 phoE Broad specificity 94.9 0.066 1.4E-06 49.4 6.4 47 125-180 27-73 (208)
12 PF00300 His_Phos_1: Histidine 94.5 0.069 1.5E-06 46.5 5.3 46 126-180 25-70 (158)
13 PTZ00122 phosphoglycerate muta 94.3 0.11 2.3E-06 51.0 6.7 52 126-180 125-176 (299)
14 TIGR03848 MSMEG_4193 probable 94.0 0.11 2.3E-06 47.9 5.7 45 125-180 25-69 (204)
15 PRK14116 gpmA phosphoglyceromu 94.0 0.14 3.1E-06 48.1 6.6 46 125-179 26-71 (228)
16 PRK15004 alpha-ribazole phosph 93.9 0.15 3.2E-06 46.8 6.4 44 125-179 25-68 (199)
17 PRK01112 phosphoglyceromutase; 93.4 0.17 3.6E-06 47.6 6.0 44 125-179 26-69 (228)
18 PRK01295 phosphoglyceromutase; 93.3 0.19 4.2E-06 46.4 6.2 47 125-180 27-73 (206)
19 PRK14120 gpmA phosphoglyceromu 92.9 0.28 6E-06 46.8 6.7 46 125-179 29-74 (249)
20 PRK14119 gpmA phosphoglyceromu 92.9 0.28 6E-06 46.1 6.6 46 125-179 26-71 (228)
21 PRK03482 phosphoglycerate muta 92.7 0.33 7.1E-06 45.1 6.8 44 125-179 26-69 (215)
22 PRK14118 gpmA phosphoglyceromu 92.7 0.3 6.5E-06 45.9 6.5 46 125-179 25-70 (227)
23 TIGR03162 ribazole_cobC alpha- 92.6 0.17 3.6E-06 45.4 4.5 44 125-179 22-65 (177)
24 PRK14115 gpmA phosphoglyceromu 92.6 0.31 6.7E-06 46.4 6.6 47 125-180 25-71 (247)
25 smart00855 PGAM Phosphoglycera 92.6 0.21 4.6E-06 43.6 5.0 49 124-180 23-71 (155)
26 PRK13463 phosphatase PhoE; Pro 92.4 0.35 7.6E-06 44.5 6.5 43 125-178 27-69 (203)
27 KOG0235 Phosphoglycerate mutas 92.4 0.21 4.5E-06 46.0 4.8 48 125-181 30-77 (214)
28 TIGR01258 pgm_1 phosphoglycera 91.9 0.37 8.1E-06 45.8 6.1 47 125-180 25-71 (245)
29 PRK07238 bifunctional RNase H/ 91.3 0.38 8.3E-06 48.8 5.9 46 125-180 196-241 (372)
30 PRK06193 hypothetical protein; 90.4 0.77 1.7E-05 42.3 6.4 44 125-177 72-115 (206)
31 PTZ00123 phosphoglycerate muta 90.1 0.49 1.1E-05 44.7 5.0 48 125-181 13-60 (236)
32 PRK14117 gpmA phosphoglyceromu 90.0 0.81 1.8E-05 43.0 6.5 45 125-178 26-70 (230)
33 TIGR00249 sixA phosphohistidin 89.3 0.68 1.5E-05 40.5 5.0 47 125-180 21-67 (152)
34 COG2062 SixA Phosphohistidine 89.0 0.92 2E-05 40.0 5.5 49 124-181 23-71 (163)
35 PRK15416 lipopolysaccharide co 87.7 0.78 1.7E-05 42.0 4.4 44 125-178 78-121 (201)
36 PRK10848 phosphohistidine phos 84.9 1.4 3E-05 38.9 4.4 47 125-180 21-67 (159)
37 PTZ00322 6-phosphofructo-2-kin 84.3 1.7 3.6E-05 47.8 5.7 47 124-178 441-487 (664)
38 PRK13462 acid phosphatase; Pro 82.9 2.1 4.5E-05 39.4 4.9 43 125-176 30-72 (203)
39 KOG4754 Predicted phosphoglyce 81.8 2.6 5.7E-05 38.5 4.8 50 124-180 45-94 (248)
40 KOG3734 Predicted phosphoglyce 72.7 6.3 0.00014 37.7 4.9 48 125-181 68-115 (272)
41 COG3422 Uncharacterized conser 46.5 26 0.00056 24.9 2.9 25 400-427 3-28 (59)
42 PF15284 PAGK: Phage-encoded v 45.2 17 0.00038 26.0 1.9 23 1-23 1-23 (61)
43 cd07040 HP Histidine phosphata 35.5 43 0.00093 28.3 3.4 46 339-407 99-144 (153)
44 KOG4609 Predicted phosphoglyce 33.2 44 0.00096 30.7 3.1 50 122-180 109-158 (284)
45 PRK14758 hypothetical protein; 28.1 61 0.0013 19.0 2.0 15 6-20 10-24 (27)
46 PTZ00264 circumsporozoite-rela 27.1 55 0.0012 26.9 2.4 22 1-22 1-22 (148)
47 PF06589 CRA: Circumsporozoite 22.4 1E+02 0.0022 25.9 3.1 20 1-20 1-20 (157)
48 cd00280 TRFH Telomeric Repeat 21.5 65 0.0014 29.1 2.0 73 277-362 21-93 (200)
No 1
>KOG1382 consensus Multiple inositol polyphosphate phosphatase [General function prediction only]
Probab=100.00 E-value=4.5e-68 Score=516.61 Aligned_cols=409 Identities=31% Similarity=0.529 Sum_probs=324.3
Q ss_pred cccccccccCccCcccCCCCCCCCCCCCCCCCceeeeEeeeeccCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 011728 27 FDVRRHLSTVSRYDFVKDVVDKNFVPSEIPDGCTPIHLNLVARHGTRAPTKKRMRELERLADHLEVLIREAKEKGSSLQK 106 (478)
Q Consensus 27 ~~~~~~~g~~spY~~~~~~~~~~~~~~~~p~~~~l~~V~~l~RHG~R~P~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 106 (478)
+++..++|+++||+.+... .|++.+.|+||+++|||+|+|||+|+|+.+.+..+...+.++.+++........+..+
T Consensus 32 ~~f~~~~gskt~Y~~p~~~---~g~~~~lp~~C~p~qv~~l~RHGtR~PT~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 108 (467)
T KOG1382|consen 32 FDFTRLLGSKTPYQFPGFY---IGPSRDLPEGCEPKQVQLLIRHGTRYPTKSVIAKIVSLAYKLKNYTRDQLGRSSPLND 108 (467)
T ss_pred hhhhhhcCCCCcccccccc---CCCCCCCCCCcceeeeeeehhcCCCCCcHhHHHHHHHHHHHHHHHHHHhcCCCCcccc
Confidence 5788899999999984333 2445569999999999999999999999999988888888888887665444444444
Q ss_pred chhhhcCCCCCCCCccccCccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhccCCCCCC
Q 011728 107 VPGWLQGWKSPWQGKLKGGELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMGLFNERGT 186 (478)
Q Consensus 107 ~~~~l~~w~~~~~~~~~~g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~Glf~~~~~ 186 (478)
...|...|..++......++|-.+|..+++.++.|++++++.++-..+++..+.|++|.++||..||++|+.|||+....
T Consensus 109 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~g~~~a~R~~r~f~~~y~~~~n~~~y~i~tt~~~R~~dSA~~F~~GLfg~~~~ 188 (467)
T KOG1382|consen 109 DYEFFILDWSKLEMEVTEAELVDQLEDEGRMLAKRLARRFPALYYELENPTVYNINTTASQRVVDSAQAFAYGLFGEDHF 188 (467)
T ss_pred cccccccccchhcccccccchhhhhhhhHHHHHHHHHHHHHHHHHhhcCCceEEeeccchHHHHHHHHHHHhhhcccccc
Confidence 33332222222222345677777777777777777777777766555677889999999999999999999999986654
Q ss_pred CCCCCccceeEeecCCCCCCccccCcCccchhhhhcc-ChhHHHHhhh-HHHHHHHHHHHhhcCC-CCChhhHHHHHHHh
Q 011728 187 LGPGRHRAFAVTSESRASDIKLRFHDCCDNYKDFRIS-QAPAVERLKE-PILDEMTSSIARRYEL-NFTRQDVSSLWFLC 263 (478)
Q Consensus 187 ~~~~~~~~i~i~t~~~~~d~~L~~~~~Cp~~~~~~~~-~~~~~~~~~~-~~~~~~~~~l~~~~g~-~~t~~~v~~~~~~c 263 (478)
..+ .+.+.....+..+ .|++++.||+|+..... ......+|.. ++++++.++|+++.+. |++..||..||.+|
T Consensus 189 ~~t--~~~~~E~~~~gan--~Lr~y~~Cp~~k~~~~k~t~~~~~~~~~~~~l~~I~~rl~k~~~~~nLt~~Di~~lf~~C 264 (467)
T KOG1382|consen 189 NIT--LQTVSEAPSAGAN--DLRFYNSCPKWKTDVNKTTDDILEKFLTEPYLNPIAKRLNKRNDLLNLTNADISSLFFWC 264 (467)
T ss_pred CCC--ceeeeccCCCCcc--hhhhhhcCcchhccccccchHHHHHHhcchhhHHHHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence 322 1112211112223 38999999999987653 2345677875 9999999999998754 89999999999999
Q ss_pred hhhhhhcccCcccccCCChhHHhhhhhhhhHHHHHHhcCCCchhhhhchHHHHHHHHHHHHhhhhcccCCCCCcccCcEE
Q 011728 264 KQEASLLDITDQACGLFSPSEVALLEWTDDLEVFILKGYGKSLNYRMGVPLLEDIVQSMEQAINAKEEKHTSGNYEKARL 343 (478)
Q Consensus 264 ~~e~~~~g~~s~~c~~ft~~e~~~~ey~~dl~~y~~~g~g~~~~~~~g~~ll~~i~~~l~~~~~~~~~~~~~~~~~k~~l 343 (478)
.||.++.|..|+||++|+++|+..+||.+||++||..|||.++++..||+|++++++.|++.++..+ ..|+.+
T Consensus 265 ~yE~a~~~~~S~~C~iFt~~e~~~~EY~~DL~~yy~~GyGy~~~~~~g~~l~ndl~~~L~~~~~~~~-------~~kV~L 337 (467)
T KOG1382|consen 265 AYEIALKGYRSDWCDIFTPDELLVFEYLEDLEYYYGDGYGYELNSSLGCPLFNDLLKSLRESEEQDQ-------DQKVWL 337 (467)
T ss_pred HHHHHhcCCCCccccCcCHHHHhHhhhhhhHHHHhccCCCcchHhhhccHHHHHHHHHHhhhhcccc-------cccEEE
Confidence 9999999977999999999999999999999999999999999999999999999999998876542 369999
Q ss_pred EeecccchHHHHHHhccccccchhhhhcccCCCCCCCCC-CCCCCeeeeccccccceeEEEEeeCCCCCCCCeEEEEEec
Q 011728 344 RFAHAETVIPFTCLLGLFLERSEFQQIQKEEPLALPPKP-PQSRNWRGSILAPFTGNNMLVLYSCPANSSDKYFVQVLHN 422 (478)
Q Consensus 344 ~f~HD~ti~~ll~aLgl~~~~~~l~~~~~~~pl~~~~~~-~~~r~w~~s~i~Pfas~l~~El~~~~~~~~~~~~Vrvl~N 422 (478)
.|+||++|++++++||+++|.. ||++...+ +.++.|+ |.++|||||+++|+|.|++ ++++||+++|
T Consensus 338 ~FtHdt~Ilp~lt~lG~f~D~~---------plt~~~~~~~~~~~~~-S~~vPfa~Nlitely~C~~---~k~yVr~l~N 404 (467)
T KOG1382|consen 338 SFTHDTTILPLLTALGLFDDKT---------PLTALHVDKQIHTRHR-SWIVPFAANLITELYQCSA---NKYYVRVLVN 404 (467)
T ss_pred EeecccchHHHHHHhccccCCC---------cCccccccccccccch-hhccccccceEEEEEeCCC---CCeeeEEEec
Confidence 9999999999999999998854 55544332 3366677 7999999999999999984 7899999999
Q ss_pred cccccCCCCCCC--CCCChHHHHHHhhcccccCccccccccCCCCcc
Q 011728 423 EHPTPMPGCNGT--DFCPFDVFKERIVAPHLKYDYNTLCNVQTEQAI 467 (478)
Q Consensus 423 ~~~~~lp~C~~~--~~Cpl~~F~~~~~~~~~~~d~~~~C~~~~~~~~ 467 (478)
+++++|++|+.+ ..|++.+|.+++.++.. +.|..++....
T Consensus 405 e~Vvpl~~C~~gp~~Sc~l~~f~~y~~~~v~-----~~~~v~s~s~~ 446 (467)
T KOG1382|consen 405 EQVVPLPGCSVGPGFSCELEDFYAYANNPVR-----EVCDVNSVSNS 446 (467)
T ss_pred CceeECCCCCCCCcccchHHHHHHHHhcchh-----hhhcccccccc
Confidence 999999999753 38999999998766543 56766555444
No 2
>PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Acid phosphatases (3.1.3.2 from EC) are a heterogeneous group of proteins that hydrolyse phosphate esters, optimally at low pH. It has been shown [] that a number of acid phosphatases, from both prokaryotes and eukaryotes, share two regions of sequence similarity, each centred around a conserved histidine residue. These two histidines seem to be involved in the enzymes' catalytic mechanism [, ]. The first histidine is located in the N-terminal section and forms a phosphohistidine intermediate while the second is located in the C-terminal section and possibly acts as proton donor. Enzymes belonging to this family are called 'histidine acid phosphatases' and include: Escherichia coli pH 2.5 acid phosphatase (gene appA). E. coli glucose-1-phosphatase (3.1.3.10 from EC) (gene agp). Yeast constitutive and repressible acid phosphatases (genes PHO3 and PHO5). Schizosaccharomyces pombe acid phosphatase (gene pho1). Aspergillus awamori phytases A and B (3.1.3.8 from EC) (gene phyA and phyB). Mammalian lysosomal and prostatic acid phosphatase. Several Caenorhabditis elegans hypothetical proteins. ; GO: 0003993 acid phosphatase activity; PDB: 1DKN_A 1DKQ_A 1DKL_B 1DKP_A 1DKM_A 1DKO_A 2GFI_B 3IT1_B 3IT0_B 3IT3_B ....
Probab=100.00 E-value=1.3e-46 Score=377.24 Aligned_cols=327 Identities=25% Similarity=0.404 Sum_probs=233.6
Q ss_pred eeeeEeeeeccCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCCCCCchhhhcCCCCC-CCCccccCccchhhHHHHHHH
Q 011728 60 TPIHLNLVARHGTRAPTKKRMRELERLADHLEVLIREAKEKGSSLQKVPGWLQGWKSP-WQGKLKGGELISKGEDELYDL 138 (478)
Q Consensus 60 ~l~~V~~l~RHG~R~P~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~-~~~~~~~g~LT~~G~~q~~~l 138 (478)
+|++|++|+|||+|+|+........+.............. ....|...|..+ ....|+.|+||+.|++|++++
T Consensus 1 ~L~~v~v~~RHG~R~P~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~g~LT~~G~~q~~~l 74 (347)
T PF00328_consen 1 ELEQVQVLHRHGDRTPLSSFPKDVTEWWDCELESSAMSPE------TPGPFPGNYIQNEFNWPCKWGQLTPRGMEQHYQL 74 (347)
T ss_dssp EEEEEEEEEE--SBB-SHHHHHHHHHHHHHHHHTHHHHHT------GGSGGGGTT--TCCGSSSCTTSBTHHHHHHHHHH
T ss_pred CEEEEEEEEeCcCCcCCCCCCccccccccchhhhhhcccC------CCCCccccccccccccCCCCCcccchhhhHHHHH
Confidence 6999999999999999999864333322111100000000 112455433111 123578899999999999999
Q ss_pred HHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhccCCCCCC------CCCCCccceeEeecCC----CCCCcc
Q 011728 139 GIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMGLFNERGT------LGPGRHRAFAVTSESR----ASDIKL 208 (478)
Q Consensus 139 G~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~Glf~~~~~------~~~~~~~~i~i~t~~~----~~d~~L 208 (478)
|++||+||+.|+++.+++++|+||||+.+||++||++|+.||||+... .....++++++++.+. ..+.++
T Consensus 75 G~~lr~~Y~~l~~~~~~~~~v~vrSt~~~Rt~~Sa~af~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (347)
T PF00328_consen 75 GKRLRERYPGLFPDNYNPEQVYVRSTNKQRTIQSAQAFLQGLYPPSGEPFPDITQPPNSWQPIPVHTIPEIKKNDDDILL 154 (347)
T ss_dssp HHHHHHHHHTSSTSSS-TTTEEEEEESSHHHHHHHHHHHHHHSHTTSS-ECTTTSCTSCTCTEEEEEEECCHCGTTSSSS
T ss_pred HHHHHHHHHHhccccccccceeEEEeccchHHHHHHHHHHHHhCCCccccccccccccCCCCcceeeccccccccchhcc
Confidence 999999999999999999999999999999999999999999987761 1123467777777655 344455
Q ss_pred ccCcCccchhhh----hccChhHHHHhhhHHHHHHHHHHHhh-cCC-CCChhhHHHHHHHhhhhhhhcccCcccccCCCh
Q 011728 209 RFHDCCDNYKDF----RISQAPAVERLKEPILDEMTSSIARR-YEL-NFTRQDVSSLWFLCKQEASLLDITDQACGLFSP 282 (478)
Q Consensus 209 ~~~~~Cp~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~-~~t~~~v~~~~~~c~~e~~~~g~~s~~c~~ft~ 282 (478)
..+..||++.+. .......+.++...+...+.++|.+. .|. +++..++..++..|.++.. ....+++|.+|+.
T Consensus 155 ~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 233 (347)
T PF00328_consen 155 PNYDNCPAYNEIDSENEKEQSEEIDKWNQDFQESLAKRLQKVIPGEDNLTFFDVWAIFDDCLYEQI-YNDGSPFPEWFTD 233 (347)
T ss_dssp TSHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECTHHHHHHHHHHHHHHHH-HHTT-GGGGGSCH
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccccCccccccchhhhhhhhhhhhhhc-cCCCCCCchhhcc
Confidence 556789999871 11112333444444333444477776 343 5677788888888887765 2335799999999
Q ss_pred --hHHhhhhhhhhHHHHHHh-cCCCchhhhhchHHHHHHHHHHHHhhhhcccCCCCCcccCcEEEeecccchHHHHHHhc
Q 011728 283 --SEVALLEWTDDLEVFILK-GYGKSLNYRMGVPLLEDIVQSMEQAINAKEEKHTSGNYEKARLRFAHAETVIPFTCLLG 359 (478)
Q Consensus 283 --~e~~~~ey~~dl~~y~~~-g~g~~~~~~~g~~ll~~i~~~l~~~~~~~~~~~~~~~~~k~~l~f~HD~ti~~ll~aLg 359 (478)
+++..+++..|+..+|.. +.+..+.+..|++++++|+++|...+.+.. .+..+|+++|||||+||++|+++||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~l~~~~~~~~----~~~~~k~~~~s~HD~tl~~ll~~Lg 309 (347)
T PF00328_consen 234 MKEDALQLEYLEDLKEYYQYYGYSDEIARLQGGPLLNELLRRLKQAINGNS----PGRPPKLVLYSGHDTTLMPLLSALG 309 (347)
T ss_dssp TSHHHHHHHHHHHHHHHHHHCSTTHHHHHHHHHHHHHHHHHHHHHCHSSTC----SCSSCSEEEEEE-HHHHHHHHHHTT
T ss_pred cchHHHHHHhhhhHHHHhhcccCCchHHHHHHhHHHHHHHHHHhhcccccc----ccccceEEEEecCHHHHHHHHHHhC
Confidence 999999999999999887 778888999999999999999999876542 1234799999999999999999999
Q ss_pred cccccchhhhhcccCCCCCCCCCCCCCCeeeeccccccceeEEEEeeCCCCCCCCeEEEEEec
Q 011728 360 LFLERSEFQQIQKEEPLALPPKPPQSRNWRGSILAPFTGNNMLVLYSCPANSSDKYFVQVLHN 422 (478)
Q Consensus 360 l~~~~~~l~~~~~~~pl~~~~~~~~~r~w~~s~i~Pfas~l~~El~~~~~~~~~~~~Vrvl~N 422 (478)
+..... +. .+.+|||||+|+||+|+|++ ++++|||+||
T Consensus 310 l~~~~~---------~~-------------~~~~pp~as~l~fEl~~~~~---~~~~Vr~~yN 347 (347)
T PF00328_consen 310 LDNYSP---------PY-------------QSYWPPYASNLVFELYRDSG---KNYYVRVLYN 347 (347)
T ss_dssp CTTTST---------TT-------------HSSCSSTT-EEEEEEEEETT---TEEEEEEEET
T ss_pred CCccCc---------cc-------------cCCCCCccceeEEEEEEeCC---CcEEEEEEEC
Confidence 965311 10 23789999999999999842 3499999998
No 3
>cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been
Probab=100.00 E-value=2.1e-44 Score=343.58 Aligned_cols=241 Identities=31% Similarity=0.505 Sum_probs=206.2
Q ss_pred eeeeEeeeeccCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCCCCCchhhhcCCCCCCCCccccCccchhhHHHHHHHH
Q 011728 60 TPIHLNLVARHGTRAPTKKRMRELERLADHLEVLIREAKEKGSSLQKVPGWLQGWKSPWQGKLKGGELISKGEDELYDLG 139 (478)
Q Consensus 60 ~l~~V~~l~RHG~R~P~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~g~LT~~G~~q~~~lG 139 (478)
+|++|++++|||+|+| |+||+.|++|++++|
T Consensus 1 ~L~~v~~~~RHg~r~p-------------------------------------------------~~LT~~G~~q~~~~G 31 (242)
T cd07061 1 ELEQVQVLSRHGDRYP-------------------------------------------------GELTPFGRQQAFELG 31 (242)
T ss_pred CeEEEEEEEecCCCCc-------------------------------------------------hhhhHHHHHHHHHHH
Confidence 5899999999999998 579999999999999
Q ss_pred HHHHHHchhhhcC-CCCCCceEEEeccCchHHHHHHHHHhccCCCCCCCCCCCccceeEeecCCCCCCccccCcCccchh
Q 011728 140 IRIREKYPDLFSE-EYHPDVYPIKATQVPRASASAVAFGMGLFNERGTLGPGRHRAFAVTSESRASDIKLRFHDCCDNYK 218 (478)
Q Consensus 140 ~~lr~rY~~ll~~-~~~~~~i~vrST~~~Rt~~SA~af~~Glf~~~~~~~~~~~~~i~i~t~~~~~d~~L~~~~~Cp~~~ 218 (478)
++||++|++++.. .++++.++||||+.+||++||++|+.||||+.. +++++|++.+...|
T Consensus 32 ~~lr~~y~~~~~~~~~~~~~~~~~ss~~~Rt~~Sa~~~~~gl~~~~~------~~~~~i~~~~~~~~------------- 92 (242)
T cd07061 32 RYFRQRYGELLLLHSYNRSDLYIRSSDSQRTLQSAQAFLAGLFPPDG------WQPIAVHTIPEEED------------- 92 (242)
T ss_pred HHHHHHHHHhcccccCCCCeeEEEECCCcHHHHHHHHHHHhcCCCcc------cCCCceEEecCCCc-------------
Confidence 9999999987653 567889999999999999999999999999874 45678877654333
Q ss_pred hhhccChhHHHHhhhHHHHHHHHHHHhhcCCCCChhhHHHHHHHhhhhhhhcccCcccccCCChhHHhhhhhhhhHHHHH
Q 011728 219 DFRISQAPAVERLKEPILDEMTSSIARRYELNFTRQDVSSLWFLCKQEASLLDITDQACGLFSPSEVALLEWTDDLEVFI 298 (478)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~t~~~v~~~~~~c~~e~~~~g~~s~~c~~ft~~e~~~~ey~~dl~~y~ 298 (478)
++..++++|.++....+..++||.+|+.+||..+++..|+.+|+
T Consensus 93 ------------------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~ 136 (242)
T cd07061 93 ------------------------------------DVSNLFDLCAYETVAKGYSAPFCDLFTEEEWVKLEYLNDLKFYY 136 (242)
T ss_pred ------------------------------------hHHHHHHHCHHHHHhcCCCChhhcccCHHHHhhcchHhHHHHHh
Confidence 56778999999998877656999999999999999999999999
Q ss_pred HhcCCCchhhhhchHHHHHHHHHHHHhhhhcccCCCCCcccCcEEEeecccchHHHHHHhccccccchhhhhcccCCCCC
Q 011728 299 LKGYGKSLNYRMGVPLLEDIVQSMEQAINAKEEKHTSGNYEKARLRFAHAETVIPFTCLLGLFLERSEFQQIQKEEPLAL 378 (478)
Q Consensus 299 ~~g~g~~~~~~~g~~ll~~i~~~l~~~~~~~~~~~~~~~~~k~~l~f~HD~ti~~ll~aLgl~~~~~~l~~~~~~~pl~~ 378 (478)
..+++.++++.+|++++++|+++|++.+.+... .....|++++||||+||++|+++||+.++. .|++.
T Consensus 137 ~~~~~~~~~~~~~~~ll~~i~~~l~~~~~~~~~---~~~~~k~~l~saHD~ti~~ll~~LGl~~~~---------~~~~~ 204 (242)
T cd07061 137 GYGPGNPLARAQGSPLLNELLARLTNGPSGSQT---FPLDRKLYLYFSHDTTILPLLTALGLFDFA---------EPLPP 204 (242)
T ss_pred ccCCCCcchHHhhHHHHHHHHHHHhCCCCcccc---CCCCCeEEEEeEccchHHHHHHHhCCCcCC---------CCCCC
Confidence 999888999999999999999999987654210 012369999999999999999999997642 23332
Q ss_pred CCCCCCCCCeeeeccccccceeEEEEeeCCCCCCCCeEEEEEec
Q 011728 379 PPKPPQSRNWRGSILAPFTGNNMLVLYSCPANSSDKYFVQVLHN 422 (478)
Q Consensus 379 ~~~~~~~r~w~~s~i~Pfas~l~~El~~~~~~~~~~~~Vrvl~N 422 (478)
...|.|+.+.+|||||+|+||+|+|++ +++++|||+||
T Consensus 205 ----~~~~~~~~~~~pP~as~l~fEl~~~~~--~~~~~VRv~~N 242 (242)
T cd07061 205 ----DFLRGFSESDYPPFAARLVFELWRCPG--DGESYVRVLVN 242 (242)
T ss_pred ----CCCCceeeecccCCcceEEEEEEECCC--CCceeEEEEeC
Confidence 458899999999999999999999963 46789999998
No 4
>KOG3720 consensus Lysosomal & prostatic acid phosphatases [Lipid transport and metabolism]
Probab=100.00 E-value=1.2e-44 Score=365.42 Aligned_cols=329 Identities=20% Similarity=0.287 Sum_probs=234.4
Q ss_pred CCCCceeeeEeeeeccCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCCCCCchhhhcCCCCCCCCccccCccchhhHHH
Q 011728 55 IPDGCTPIHLNLVARHGTRAPTKKRMRELERLADHLEVLIREAKEKGSSLQKVPGWLQGWKSPWQGKLKGGELISKGEDE 134 (478)
Q Consensus 55 ~p~~~~l~~V~~l~RHG~R~P~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~g~LT~~G~~q 134 (478)
....++|++||+++|||+|+|....+. .+++.+... | .+|.||||++|++|
T Consensus 28 ~~~~~~Lefv~~i~RHGdRaP~~~~yp-------------------~dp~~~~~~----~------~~G~GqLT~~G~~Q 78 (411)
T KOG3720|consen 28 AVFNGELEFVQVIFRHGDRAPVDTPYP-------------------LDPFKEEDF----W------PRGWGQLTDRGMEQ 78 (411)
T ss_pred ccCCCceEEEEEEeecCCCCcccCCCC-------------------CCccccccc----C------CCCcchhhHHHHHH
Confidence 346889999999999999999655221 223221111 3 25679999999999
Q ss_pred HHHHHHHHHHHch---hhhcCCCCCCceEEEeccCchHHHHHHHHHhccCCCCCCC----CCCCccceeEeecCCCCCC-
Q 011728 135 LYDLGIRIREKYP---DLFSEEYHPDVYPIKATQVPRASASAVAFGMGLFNERGTL----GPGRHRAFAVTSESRASDI- 206 (478)
Q Consensus 135 ~~~lG~~lr~rY~---~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~Glf~~~~~~----~~~~~~~i~i~t~~~~~d~- 206 (478)
+++||++||+||+ +||++.|+++++++|||+.+||++||+++++||||+.... .+..|+||||++.....|.
T Consensus 79 ~~~LG~~LR~rYvr~~~fL~~~y~~~ev~iRStd~nRtl~SAqs~laGlfp~~~~~~~~~~~~~W~piPV~~~~~~~D~~ 158 (411)
T KOG3720|consen 79 MFELGRFLRKRYVRYGNFLSPKYNPKEVYIRSTDVNRTLMSAQSVLAGLFPPEGRKMGWNYPDGWQPVPVPTHTLEEDDL 158 (411)
T ss_pred HHHHHHHHHHHHhhccccCCcccCcceEEEecCCccHHHHHHHHHHHhhCCCCCCCcccCcccCCCceeeEEeecCcchh
Confidence 9999999999554 6999999999999999999999999999999999997432 2336999999998766664
Q ss_pred cccc-CcCccchhhhhccC-h-hHHHHhhhHHHHHHHHHHHhhcCCCC-ChhhHHHHHHHhhhhhhhcccCcccccCCCh
Q 011728 207 KLRF-HDCCDNYKDFRISQ-A-PAVERLKEPILDEMTSSIARRYELNF-TRQDVSSLWFLCKQEASLLDITDQACGLFSP 282 (478)
Q Consensus 207 ~L~~-~~~Cp~~~~~~~~~-~-~~~~~~~~~~~~~~~~~l~~~~g~~~-t~~~v~~~~~~c~~e~~~~g~~s~~c~~ft~ 282 (478)
++.+ ...||++....... . +...+... ....+.++|.+..|.+. ....+..++|....+... + -+.++.+++
T Consensus 159 ~~~~~~~~Cpr~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~g~~~~~~~~~~~~~d~l~~e~~~-~--~~~p~w~~~ 234 (411)
T KOG3720|consen 159 LLLPQKAPCPRYDELWREVAEEPELQKINE-PVAELLRRLTNHTGLTHVDLDNFNDLYDTLKCEQFN-N--LPLPPWLND 234 (411)
T ss_pred hhccccCCCCcHHHHHHHHhhhhhhhhccc-HHHHHHHHHHHhhCCCcccchhhcccccHHHHHHHh-C--CCCCcchhh
Confidence 3444 78899998865431 1 22222222 24677888888888775 323333344432222211 1 244455554
Q ss_pred hHHhhhhhhhhHHHHHHh------cCCCchhhhhchHHHHHHHHHHHHhhhhcccCCCCCcccCcEEEee---cccchHH
Q 011728 283 SEVALLEWTDDLEVFILK------GYGKSLNYRMGVPLLEDIVQSMEQAINAKEEKHTSGNYEKARLRFA---HAETVIP 353 (478)
Q Consensus 283 ~e~~~~ey~~dl~~y~~~------g~g~~~~~~~g~~ll~~i~~~l~~~~~~~~~~~~~~~~~k~~l~f~---HD~ti~~ 353 (478)
+ .+...|-..++.. .++.++.+++||+|+++|+++|..+..+.. .++..++++ ||+||.+
T Consensus 235 ~----~~~~~~~i~~~~~~~~~~~~~~~e~~kl~gG~lln~il~~~~~k~~~~~-------~~~~~~~~~~~~HD~tl~a 303 (411)
T KOG3720|consen 235 Q----AQIFYDSIQAFSEGLFVGPDYSPEMRKLRGGPLLNDLLNNMVEKSSCSL-------AKKKLFYSYLYGHDTTLYA 303 (411)
T ss_pred H----HHHHHHHHHHHHHHHccCcchhHHHHHhccChhHHHHHHHHHHHHhccc-------CccccceeeccCccHHHHH
Confidence 3 0111111111111 134577899999999999999999887643 245666666 9999999
Q ss_pred HHHHhccccccchhhhhcccCCCCCCCCCCCCCCeeeeccccccceeEEEEeeCCCCCCCCeEEEEEec-c-----cccc
Q 011728 354 FTCLLGLFLERSEFQQIQKEEPLALPPKPPQSRNWRGSILAPFTGNNMLVLYSCPANSSDKYFVQVLHN-E-----HPTP 427 (478)
Q Consensus 354 ll~aLgl~~~~~~l~~~~~~~pl~~~~~~~~~r~w~~s~i~Pfas~l~~El~~~~~~~~~~~~Vrvl~N-~-----~~~~ 427 (478)
||.+|++.++ .+|||||.|+||+|+..+ ++.+||++|. + .++.
T Consensus 304 lL~aL~~~~~----------------------------~~P~yas~i~iEl~~~~~---~~~~vk~~yr~~~~~~~~~~~ 352 (411)
T KOG3720|consen 304 LLAALGVGDG----------------------------EWPPYASAIAIELHRNKG---GKPYVKLLYRNDEHSEPVTLQ 352 (411)
T ss_pred HHHHHhccCC----------------------------CCCchHHHhHhhheecCC---CCEEEEEEEecCCCCCceecc
Confidence 9999988642 689999999999999763 6899999993 3 1346
Q ss_pred CCCCCCCCCCChHHHHHHhhcccccCcccccccc
Q 011728 428 MPGCNGTDFCPFDVFKERIVAPHLKYDYNTLCNV 461 (478)
Q Consensus 428 lp~C~~~~~Cpl~~F~~~~~~~~~~~d~~~~C~~ 461 (478)
+|||+ ..||+++|.+. .+...+.++..+|..
T Consensus 353 ipgC~--~~C~l~~f~~~-~~~~~p~~~~~~~~~ 383 (411)
T KOG3720|consen 353 IPGCD--GPCPLSTFQNL-AKDVRPDKPIEECCG 383 (411)
T ss_pred CCCCC--CCCCHHHHHHH-HhhcCCCChHHHhcc
Confidence 79997 59999999984 567778888888876
No 5
>PRK10173 glucose-1-phosphatase/inositol phosphatase; Provisional
Probab=100.00 E-value=2.9e-38 Score=317.99 Aligned_cols=319 Identities=16% Similarity=0.222 Sum_probs=208.3
Q ss_pred CCCCceeeeEeeeeccCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCCCCCchhhhcCCCCCCCCccccCccchhhHHH
Q 011728 55 IPDGCTPIHLNLVARHGTRAPTKKRMRELERLADHLEVLIREAKEKGSSLQKVPGWLQGWKSPWQGKLKGGELISKGEDE 134 (478)
Q Consensus 55 ~p~~~~l~~V~~l~RHG~R~P~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~g~LT~~G~~q 134 (478)
.+++++|++|.+|+|||.|+|+......+ ..++ + ..|++ |. +..|+||+.|+.+
T Consensus 25 ~~~~~~L~~vvilsRHg~R~P~~~~~~~l-------~~~t--------~----~~Wp~-w~------~~~G~LT~~G~~~ 78 (413)
T PRK10173 25 VPEGYQLQQVLMMSRHNLRAPLANNGSVL-------EQST--------P----NAWPE-WD------VPGGQLTTKGGVL 78 (413)
T ss_pred CcccCeEEEEEEEeecccCCCCCCcchhh-------hhcC--------C----CCCCC-CC------CCcccccHHHHHH
Confidence 45799999999999999999998753211 1111 0 23553 64 5679999999999
Q ss_pred HHHHHHHHHHHch--hhhcCCC--CCCceEEEeccCchHHHHHHHHHhccCCCCCCCCCCCccceeEeec-C-CCCCCcc
Q 011728 135 LYDLGIRIREKYP--DLFSEEY--HPDVYPIKATQVPRASASAVAFGMGLFNERGTLGPGRHRAFAVTSE-S-RASDIKL 208 (478)
Q Consensus 135 ~~~lG~~lr~rY~--~ll~~~~--~~~~i~vrST~~~Rt~~SA~af~~Glf~~~~~~~~~~~~~i~i~t~-~-~~~d~~L 208 (478)
+..+|+.+|++|. +|++..+ +++.|+|||+..+||++||++|+.||||.+. |+|+.. + ...|++.
T Consensus 79 ~~~~G~~~r~~~~~~~ll~~~~cp~~~~v~~~a~~~~RT~~Sa~afl~Gl~P~c~---------i~v~~~~~~~~~DPlF 149 (413)
T PRK10173 79 EVYMGHYMREWLAQQGLVKSGECPPPDTVYAYANSLQRTVATAQFFITGAFPGCD---------IPVHHQEKMGTMDPTF 149 (413)
T ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCcCeEEEEeCCchHHHHHHHHHHHhcCCCCC---------ceeeecCCcCCCCCCC
Confidence 9999999999997 3888753 6789999999999999999999999999875 466653 2 3347776
Q ss_pred ccCc--Cccchhhhhcc-ChhHHHHhhhHHHHHHHHHHHhhcC--------------C---------------CCC----
Q 011728 209 RFHD--CCDNYKDFRIS-QAPAVERLKEPILDEMTSSIARRYE--------------L---------------NFT---- 252 (478)
Q Consensus 209 ~~~~--~Cp~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g--------------~---------------~~t---- 252 (478)
.|.. ..+.+.+.... -..... ...++.-++.|.+.++ + .++
T Consensus 150 ~p~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~L~~vld~~~s~~C~~~~~c~~~~~~~~~~~~~~~~~~~~G~~~ 226 (413)
T PRK10173 150 NPVITDDSAAFREQALAAMEKELS---KLQLTPSYQLLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLK 226 (413)
T ss_pred CccccCChHHHHHHHHHHhccchh---hccccHHHHHHHHHhCcccCccCCCCCCCcCcCCCCceeecCCCCccccCchh
Confidence 5432 12222211100 000000 0001111122221111 0 010
Q ss_pred -hhhHHHHHHHhhhhhhhcccCcccccCCChhHHhhhhhhhhHHHHHHhcC-CC-chhhhhchHHHHHHHHHHHHhhhhc
Q 011728 253 -RQDVSSLWFLCKQEASLLDITDQACGLFSPSEVALLEWTDDLEVFILKGY-GK-SLNYRMGVPLLEDIVQSMEQAINAK 329 (478)
Q Consensus 253 -~~~v~~~~~~c~~e~~~~g~~s~~c~~ft~~e~~~~ey~~dl~~y~~~g~-g~-~~~~~~g~~ll~~i~~~l~~~~~~~ 329 (478)
..++.+++.+..++.-.. ..++||..+++++|..+. ++.++|..+. +. ++++..|+|||+.|.+.+.. .+.
T Consensus 227 ~a~~l~D~l~lqy~~G~~l-~~~~W~~~~t~~~~~~l~---~L~~~~~~~~~~tp~~ar~~g~pLL~~i~~~L~~--~~~ 300 (413)
T PRK10173 227 VGNSLVDAFTLQYYEGFPM-DQVAWGEIKTDQQWKVLS---KLKNGYQDSLFTSPEVARNVAKPLVKYIDKALVT--DRA 300 (413)
T ss_pred hhhhHHHHHHHHHHhcCCC-CCCCccccCCHHHHHHHH---HHHHHHHhhcccCHHHHHHHHHHHHHHHHHHHhc--CCC
Confidence 011222222222221111 136899999999887655 7777666664 43 47899999999999777762 111
Q ss_pred ccCCCCCcccCcEEEeecccchHHHHHHhccccccchhhhhcccCCCCCCCCCCCCCCeeeeccccccceeEEEEeeCCC
Q 011728 330 EEKHTSGNYEKARLRFAHAETVIPFTCLLGLFLERSEFQQIQKEEPLALPPKPPQSRNWRGSILAPFTGNNMLVLYSCPA 409 (478)
Q Consensus 330 ~~~~~~~~~~k~~l~f~HD~ti~~ll~aLgl~~~~~~l~~~~~~~pl~~~~~~~~~r~w~~s~i~Pfas~l~~El~~~~~ 409 (478)
..+|+++|||||+||++|+++||+++.. -|.. ...+||||+|+||+|+|.+
T Consensus 301 -------~~~Kl~lysgHDtnIa~ll~ALgl~~~~---------lP~~-------------~~~~P~g~~LvFEl~~d~~ 351 (413)
T PRK10173 301 -------SAPKVTVLVGHDSNIASLLTALDFKPYQ---------LHDQ-------------YERTPIGGKIVFQRWHDSK 351 (413)
T ss_pred -------CCCCEEEEEEccccHHHHHHHhCCCccc---------cCCC-------------CCcCCccceEEEEEEEeCC
Confidence 1369999999999999999999997431 1211 0458999999999999864
Q ss_pred CCCCCeEEEEEe--cc------------------ccccCCCCCC--CCCCChHHHHHHhhc
Q 011728 410 NSSDKYFVQVLH--NE------------------HPTPMPGCNG--TDFCPFDVFKERIVA 448 (478)
Q Consensus 410 ~~~~~~~Vrvl~--N~------------------~~~~lp~C~~--~~~Cpl~~F~~~~~~ 448 (478)
+++.+|||.| |. .++.+|||+. +++|||++|.+.+..
T Consensus 352 --~~~~~Vkv~y~~qs~~qlRn~~~l~~~~pP~~~~l~lpGC~~~~~~~Cpl~~F~~~~~~ 410 (413)
T PRK10173 352 --ANRDLMKIEYVYQSAEQLRNADALTLQAPPQRVTLELKGCPIDANGFCPMDKFDSVLNE 410 (413)
T ss_pred --CCCeEEEEEEEecchHhhhccccccccCCCccccccCCCCCCCCCCcCCHHHHHHHHHH
Confidence 4677899864 31 1357899963 479999999997643
No 6
>PRK10172 phosphoanhydride phosphorylase; Provisional
Probab=100.00 E-value=5.7e-37 Score=306.48 Aligned_cols=334 Identities=16% Similarity=0.185 Sum_probs=212.5
Q ss_pred CCCCCceeeeEeeeeccCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCCCCCCchhhhcCCCCCCCCccccCccchhhHH
Q 011728 54 EIPDGCTPIHLNLVARHGTRAPTKKRMRELERLADHLEVLIREAKEKGSSLQKVPGWLQGWKSPWQGKLKGGELISKGED 133 (478)
Q Consensus 54 ~~p~~~~l~~V~~l~RHG~R~P~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~g~LT~~G~~ 133 (478)
..+.+.+|++|++|+|||.|+|+..... -..+.. ..|. .|. ++.|+||+.|++
T Consensus 27 ~~~~~~~L~~Vvil~RHG~RaP~~~~~~-------------------~~~~t~-~~w~-~W~------~~~GqLT~~G~~ 79 (436)
T PRK10172 27 QSEPELKLESVVIVSRHGVRAPTKATQL-------------------MQDVTP-DAWP-QWP------VKLGWLTPRGGE 79 (436)
T ss_pred cCCCCCeEEEEEEEeeCCCCCCCCCCcc-------------------cccCCC-CCCC-CCC------CCcchhhHHHHH
Confidence 3468999999999999999999986531 001111 1222 242 578999999999
Q ss_pred HHHHHHHHHHHHchh--hhcCC--CCCCceEEEeccCchHHHHHHHHHhccCCCCCCCCCCCccceeEeecCC--CCCCc
Q 011728 134 ELYDLGIRIREKYPD--LFSEE--YHPDVYPIKATQVPRASASAVAFGMGLFNERGTLGPGRHRAFAVTSESR--ASDIK 207 (478)
Q Consensus 134 q~~~lG~~lr~rY~~--ll~~~--~~~~~i~vrST~~~Rt~~SA~af~~Glf~~~~~~~~~~~~~i~i~t~~~--~~d~~ 207 (478)
|++.+|+++|+||.+ |++.. +++++|+|||+..+||++||++|++||||++. |+||+.+. ..|++
T Consensus 80 ~~~~lG~~lR~rY~~~~lL~~~~c~~~~~v~v~a~~~~RTi~SAqafl~GlyP~c~---------i~vh~~~~~~~~Dpl 150 (436)
T PRK10172 80 LVTLLGHYQRQRLVADGLLAAKGCPQPGQVAAIADVDQRTRKTGEAFLAGLAPDCA---------ITVHTQADTSKPDPL 150 (436)
T ss_pred HHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEeCCchHHHHHHHHHHHhcCCCCC---------CcceecCCCCCCCCc
Confidence 999999999999986 99885 68899999999999999999999999999985 57777654 46999
Q ss_pred cccC-cCccchhhhh-cc-----ChhHHHHhhhHHHHHHHHHHHhhcC-------------C---CCC------------
Q 011728 208 LRFH-DCCDNYKDFR-IS-----QAPAVERLKEPILDEMTSSIARRYE-------------L---NFT------------ 252 (478)
Q Consensus 208 L~~~-~~Cp~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~l~~~~g-------------~---~~t------------ 252 (478)
+++- ..|+.++... .. .......+. ..+++.++.|.+.++ . .+.
T Consensus 151 F~pv~~~~~~~d~~~~~~a~~~~~~g~~~~~~-~~~~~~~~~L~~vl~~~~s~~C~~~~~~~~~C~l~~~~p~~~~~~~~ 229 (436)
T PRK10172 151 FNPLKTGVCQLDNANVTDAILSRAGGSIADFT-QRYQTAFRELERVLNFAQSPLCLSREKQDKSCSLTQALPSELKVSAD 229 (436)
T ss_pred cChhhcCCCccCHHHHHHHHHHHhCCchhhhh-HhHHHHHHHHHHHhccccccccccccCCCCCccccccCCcceeecCC
Confidence 8874 4477665421 10 000111111 113333444443221 0 010
Q ss_pred ---hhhHHHHHHH--hhhhhhh-ccc-CcccccCCChhHHhhhhhhhhHHHHHHhcCCCchhhhhchHHHHHHHHHHHHh
Q 011728 253 ---RQDVSSLWFL--CKQEASL-LDI-TDQACGLFSPSEVALLEWTDDLEVFILKGYGKSLNYRMGVPLLEDIVQSMEQA 325 (478)
Q Consensus 253 ---~~~v~~~~~~--c~~e~~~-~g~-~s~~c~~ft~~e~~~~ey~~dl~~y~~~g~g~~~~~~~g~~ll~~i~~~l~~~ 325 (478)
......+... ..+...+ .|. ...|-.+-++++|..+-...+..+-.. .....+++..|+|||+.|.+.|.+.
T Consensus 230 ~~~l~G~~~las~l~e~~lLqy~eg~p~vaWg~~~~~~~~~~L~~l~n~~fd~~-~~tp~vAr~~a~pLL~~I~~~L~~~ 308 (436)
T PRK10172 230 NVSLSGAVSLASMLTEIFLLQQAQGMPEPAWGRITDSHQWNTLLSLHNAQFYLL-QRTPEVARHRATPLLDLIMTALTPH 308 (436)
T ss_pred CCccccHHHHHhHHHHHHHHHHhcCCCcccccCCCCHHHHHHHHHHHHHHHHHh-hcCHHHHHhcccHHHHHHHHHHhcc
Confidence 0011111110 1111000 121 234555556777877666665532211 1234678999999999999999763
Q ss_pred hhhcccCCCCCcccCcEEEeecccchHHHHHHhccccccchhhhhcccCCCCCCCCCCCCCCeeeeccccccceeEEEEe
Q 011728 326 INAKEEKHTSGNYEKARLRFAHAETVIPFTCLLGLFLERSEFQQIQKEEPLALPPKPPQSRNWRGSILAPFTGNNMLVLY 405 (478)
Q Consensus 326 ~~~~~~~~~~~~~~k~~l~f~HD~ti~~ll~aLgl~~~~~~l~~~~~~~pl~~~~~~~~~r~w~~s~i~Pfas~l~~El~ 405 (478)
..+..... .....|+.++.|||+||+.|+++||+.. . | ++.+ .-+|+|+.|+||+|
T Consensus 309 ~~~~~~~~-~~~p~kl~~lvGHDTNIA~l~~~L~~~w---~---------l--p~q~---------~~tPpGg~LvFErw 364 (436)
T PRK10172 309 PPQKQAYG-ITLPTSVLFIAGHDTNLANLGGALELNW---T---------L--PGQP---------DNTPPGGELVFERW 364 (436)
T ss_pred cccccccc-CCCCceEEEEEecchhHHHHHHHhCCCc---c---------C--CCCC---------CCCCCcceEEEEEE
Confidence 21110000 0012399999999999999999999931 1 1 1111 22678999999999
Q ss_pred eCCCCCCCCeEEEEEe--c-------c-----------ccccCCCCCC---CCCCChHHHHHHhhcccc
Q 011728 406 SCPANSSDKYFVQVLH--N-------E-----------HPTPMPGCNG---TDFCPFDVFKERIVAPHL 451 (478)
Q Consensus 406 ~~~~~~~~~~~Vrvl~--N-------~-----------~~~~lp~C~~---~~~Cpl~~F~~~~~~~~~ 451 (478)
++.+ +++.+|||.| . . .++.+|||+. +++|||++|.+.+.+.+.
T Consensus 365 ~d~~--~~~~~vrv~~~yQsl~qLR~~~~L~l~~pp~~~~l~l~gC~~~~~~g~Cpl~~f~~~~~~~~~ 431 (436)
T PRK10172 365 RRLS--DNSQWIQVSLVYQTLQQMRDKTPLSLNTPPGEVKLTLAGCEERNAQGMCSLAGFTQIVNEARI 431 (436)
T ss_pred eeCC--CCceEEEEEEEEcCHHHHhhcCcccccCCCcceeeecCCCCCcCcCCcCCHHHHHHHHHHHhh
Confidence 9853 3566666664 2 1 2456799974 569999999997765544
No 7
>KOG3672 consensus Histidine acid phosphatase [General function prediction only]
Probab=99.90 E-value=8.9e-24 Score=200.05 Aligned_cols=339 Identities=17% Similarity=0.201 Sum_probs=192.5
Q ss_pred CCCCceeeeEeeeeccCCCCCChhHHHH-HHHHHH---------HHHHHHHHHhhcCCCCCCchhhhcCCC-CCCCCccc
Q 011728 55 IPDGCTPIHLNLVARHGTRAPTKKRMRE-LERLAD---------HLEVLIREAKEKGSSLQKVPGWLQGWK-SPWQGKLK 123 (478)
Q Consensus 55 ~p~~~~l~~V~~l~RHG~R~P~~~~~~~-~~~~~~---------~l~~~~~~~~~~~~~~~~~~~~l~~w~-~~~~~~~~ 123 (478)
.|++.+|+.|.+++|||+|+|++....+ +.+.+. ..++++..+ .+..+.....-++++. .|....|.
T Consensus 88 ~~~~~KL~gV~vviRHGdR~Pvs~V~~~kI~C~~s~~~d~~~f~~~~~~~~s~--s~~~~~~~~~pl~~~Pl~P~~~~C~ 165 (487)
T KOG3672|consen 88 YEKKLKLRGVTVVIRHGDRSPVSKVEDDKIGCLASRDVDRKAFVAYKELAESD--SIKAFLKLDPPLKQYPLVPLVSKCV 165 (487)
T ss_pred cccceEEEEEEEEEEcCCcCCceecccCCcceeeecCCCcchhhhhHHHhhcc--cccccccccCccccCCcCcCcCCCc
Confidence 7899999999999999999999876542 433211 111221111 0101100001122221 12234799
Q ss_pred cCccchhhHHHHHHHHHHHHHHchh----hhcCCCCCCceEEEeccCchHHHHHHHHHhccCCCCCCCCCCCccceeEee
Q 011728 124 GGELISKGEDELYDLGIRIREKYPD----LFSEEYHPDVYPIKATQVPRASASAVAFGMGLFNERGTLGPGRHRAFAVTS 199 (478)
Q Consensus 124 ~g~LT~~G~~q~~~lG~~lr~rY~~----ll~~~~~~~~i~vrST~~~Rt~~SA~af~~Glf~~~~~~~~~~~~~i~i~t 199 (478)
.|+||..|..||..+|+.||++|.+ ..++....++.+|.+|.++||+|||.||+-|+.|... |.+|.|-.
T Consensus 166 ~G~LT~~G~~QhL~~G~~~r~~Y~k~~lk~~pN~~sv~~lyv~TT~y~RT~QSaLA~lf~~lp~~~------w~~i~iR~ 239 (487)
T KOG3672|consen 166 SGMLTAEGALQHLRLGKYFRHRYEKTKLKADPNQRSVADLYVVTTKYNRTVQSALAFLFLYLPRTF------WAPIQIRA 239 (487)
T ss_pred ccceeHHhHHHHHhhhHHHHHHHhhccccCCccccccceeEEEeccccHHHHHHHHHHHHhcchhh------hheeeeec
Confidence 9999999999999999999999975 2234445567899999999999999999999998753 66666632
Q ss_pred cCCCCCCccccCcCccchhhhhccCh-hHHHHhhhHHHHHHHHHHHhhcCC-----CCChhhH-HHHH-HHhhhhhhhcc
Q 011728 200 ESRASDIKLRFHDCCDNYKDFRISQA-PAVERLKEPILDEMTSSIARRYEL-----NFTRQDV-SSLW-FLCKQEASLLD 271 (478)
Q Consensus 200 ~~~~~d~~L~~~~~Cp~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~g~-----~~t~~~v-~~~~-~~c~~e~~~~g 271 (478)
. ...-..+ ..+.||--+..++.-. ...+.+.+.-.+++.+...+..-+ .+.+-++ ..|. .+|.-.+.. +
T Consensus 240 s-~s~~fC~-g~C~Cp~~~~~r~~~e~~~~~q~lk~~~~dv~~~~~~~~~~~~p~~~~~pf~~ID~ll~~~Ch~~tlP-C 316 (487)
T KOG3672|consen 240 S-NSSYFCI-GQCACPIHKSIRRIYEEEHLQQFLKMKSDDVADEEKKFLSFPQPAASFDPFQMIDVLLSFICHRKTLP-C 316 (487)
T ss_pred C-cccceec-ccccchHHHHHHHHHHHHHHHHHHhcchHHHHhhhcceeeecccccccCchhHHHHHHHhhhccCccc-c
Confidence 1 1111122 2478998776654311 111122211122233332221111 1112111 1122 235433211 0
Q ss_pred cCcccccCCChhHHhhhh--hhhhHHHHHHhcCC--CchhhhhchHHHHHHHHHHHHhhhhcccCCCCCcccCcEEEeec
Q 011728 272 ITDQACGLFSPSEVALLE--WTDDLEVFILKGYG--KSLNYRMGVPLLEDIVQSMEQAINAKEEKHTSGNYEKARLRFAH 347 (478)
Q Consensus 272 ~~s~~c~~ft~~e~~~~e--y~~dl~~y~~~g~g--~~~~~~~g~~ll~~i~~~l~~~~~~~~~~~~~~~~~k~~l~f~H 347 (478)
.-.-| .+-+.+.... ...|...-...-.+ ..+..+.+-|.+.-.+++++...++.. ..-+-+++||
T Consensus 317 -rrk~c--v~~~~f~k~~n~~~~d~~~~~~de~~~~~~~~~~~a~pils~~~~~~n~~~~~~~-------~~~~~i~s~H 386 (487)
T KOG3672|consen 317 -RRKEC--VTLDSFNKMINLTTSDGSRMFDDEIGVARRLQSMEAYPILSYLRDSVNKIRKFPH-------SNYIQIFSGH 386 (487)
T ss_pred -ccccc--cchHHHhhhcceeechhhhhhhhHHHHHHHHhhcccCCCcchhhhccCccccCCh-------hheeeeeccc
Confidence 00011 1111111110 01121111111001 112234456777777777776554432 2467899999
Q ss_pred ccchHHHHHHhccccccchhhhhcccCCCCCCCCCCCCCCeeeeccccccceeEEEEeeCCCCCCCCeEEEEEeccccc-
Q 011728 348 AETVIPFTCLLGLFLERSEFQQIQKEEPLALPPKPPQSRNWRGSILAPFTGNNMLVLYSCPANSSDKYFVQVLHNEHPT- 426 (478)
Q Consensus 348 D~ti~~ll~aLgl~~~~~~l~~~~~~~pl~~~~~~~~~r~w~~s~i~Pfas~l~~El~~~~~~~~~~~~Vrvl~N~~~~- 426 (478)
|.|+.+++.+||+..- .-|-|+++++||+|+..+ ++..||++|||...
T Consensus 387 dvTl~p~l~~Lg~~~a----------------------------~~p~y~~r~vfe~y~~~~---~~~s~r~lyng~d~T 435 (487)
T KOG3672|consen 387 DVTLGPILRVLGIPFA----------------------------DPPHYTSRIVFEIYEHSD---DGLSIRTLYNGRDKT 435 (487)
T ss_pred cchhhHHHHHhCCCcC----------------------------CCcchhhhhhHHhhhccc---cceEEEEEEecCcce
Confidence 9999999999999321 346799999999999874 68999999998654
Q ss_pred -cCCCCCC-------CCCCChHHHHHH
Q 011728 427 -PMPGCNG-------TDFCPFDVFKER 445 (478)
Q Consensus 427 -~lp~C~~-------~~~Cpl~~F~~~ 445 (478)
.+..|++ .-.||++.....
T Consensus 436 ~~i~fcqd~~~~~~~~~~~~~~nl~~~ 462 (487)
T KOG3672|consen 436 YNIRFCQDDHTKRSMKPATPLENLVRF 462 (487)
T ss_pred EEEEeccCccccccCcccChHHHHHHH
Confidence 4456753 246888887653
No 8
>KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton]
Probab=98.38 E-value=1.2e-06 Score=91.16 Aligned_cols=63 Identities=35% Similarity=0.553 Sum_probs=54.9
Q ss_pred cCccchhhHHHHHHHHHHHHHHchh-----h--hcCCCCCCceEEEeccCchHHHHHHHHHhccCCCCCCC
Q 011728 124 GGELISKGEDELYDLGIRIREKYPD-----L--FSEEYHPDVYPIKATQVPRASASAVAFGMGLFNERGTL 187 (478)
Q Consensus 124 ~g~LT~~G~~q~~~lG~~lr~rY~~-----l--l~~~~~~~~i~vrST~~~Rt~~SA~af~~Glf~~~~~~ 187 (478)
.|+||+.|+.|.-+||+.||..|+. | |...|. ..+.|+|++.-|+.+||.+|+.||+...+.+
T Consensus 509 GGelT~agr~QAeeLGr~FR~~~~gg~g~gllrLhst~r-hDlKIYaSdEgRVqmtAaaFAkgLL~lEgel 578 (1018)
T KOG1057|consen 509 GGELTHAGRYQAEELGRQFRCDYPGGQGLGLLRLHSTYR-HDLKIYASDEGRVQMTAAAFAKGLLALEGEL 578 (1018)
T ss_pred CCEecchhHhhHHHHHHHHHhcCCCCCCcceeeehhhhh-ccceeEecCcchHHHHHHHHHHHHHhhccCC
Confidence 4999999999999999999999983 3 334453 5699999999999999999999999988765
No 9
>cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent Hi
Probab=98.18 E-value=3.7e-06 Score=73.62 Aligned_cols=49 Identities=33% Similarity=0.478 Sum_probs=44.3
Q ss_pred cCccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhccC
Q 011728 124 GGELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMGLF 181 (478)
Q Consensus 124 ~g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~Glf 181 (478)
.+.||+.|++|...+|++|+++| .....|+||...||.+||+.++.+++
T Consensus 23 d~~Lt~~G~~qa~~l~~~l~~~~---------~~~~~v~sSp~~R~~~Ta~~~~~~~~ 71 (153)
T cd07040 23 DGPLTEKGRQQARELGKALRERY---------IKFDRIYSSPLKRAIQTAEIILEGLF 71 (153)
T ss_pred CCCcCHHHHHHHHHHHHHHHHhC---------CCCCEEEECChHHHHHHHHHHHHHhc
Confidence 58899999999999999999988 13368899999999999999999987
No 10
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phos
Probab=95.09 E-value=0.053 Score=47.20 Aligned_cols=47 Identities=26% Similarity=0.237 Sum_probs=38.8
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhcc
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMGL 180 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~Gl 180 (478)
-.||+.|++|...+|++|+..- . ..-.|.+|...||++||+.+..++
T Consensus 24 ~~Lt~~G~~qa~~~~~~l~~~~-------~--~~~~i~~Sp~~Ra~qTa~~l~~~~ 70 (153)
T cd07067 24 VPLTEKGREQARALGKRLKELG-------I--KFDRIYSSPLKRAIQTAEIILEEL 70 (153)
T ss_pred CCCCHHHHHHHHHHHHHHHhcC-------C--CCCEEEECcHHHHHHHHHHHHHhc
Confidence 5699999999999999987532 1 124688999999999999988776
No 11
>COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]
Probab=94.86 E-value=0.066 Score=49.42 Aligned_cols=47 Identities=19% Similarity=0.246 Sum_probs=38.9
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhcc
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMGL 180 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~Gl 180 (478)
..||+.|++|...+|++|+.+ . .....|.||+..|+++||+.++..+
T Consensus 27 ~pLt~~G~~QA~~l~~~l~~~-----~----~~~~~i~sS~l~Ra~~TA~~~a~~~ 73 (208)
T COG0406 27 SPLTEEGRAQAEALAERLAAR-----D----IGFDAIYSSPLKRAQQTAEPLAEEL 73 (208)
T ss_pred CCCCHHHHHHHHHHHHHHhhc-----C----CCCCEEEECchHHHHHHHHHHHHhc
Confidence 479999999999999999865 1 1224568999999999999998865
No 12
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=94.47 E-value=0.069 Score=46.48 Aligned_cols=46 Identities=22% Similarity=0.339 Sum_probs=38.0
Q ss_pred ccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhcc
Q 011728 126 ELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMGL 180 (478)
Q Consensus 126 ~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~Gl 180 (478)
-||+.|+.|...+|+.|.+. ....-.|.+|...||++||..+..++
T Consensus 25 ~Lt~~G~~qA~~~~~~l~~~---------~~~~~~i~~Sp~~R~~qTA~~~~~~~ 70 (158)
T PF00300_consen 25 PLTERGREQARQLGEYLAER---------DIQIDVIYSSPLRRCIQTAEIIAEGL 70 (158)
T ss_dssp GBEHHHHHHHHHHHHHHHHT---------TSSCSEEEEESSHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHhhccccccc---------ccCceEEecCCcchhhhhhchhhccc
Confidence 69999999999999998871 11223488999999999999988865
No 13
>PTZ00122 phosphoglycerate mutase; Provisional
Probab=94.33 E-value=0.11 Score=50.98 Aligned_cols=52 Identities=15% Similarity=0.242 Sum_probs=38.8
Q ss_pred ccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhcc
Q 011728 126 ELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMGL 180 (478)
Q Consensus 126 ~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~Gl 180 (478)
.||+.|++|...+|++|+..+... ...... -.|.||+..||.+||+.++.++
T Consensus 125 ~LTe~G~~QA~~lg~~L~~~~~~~-~~~~~~--d~IysSPL~RA~qTAeiIa~~~ 176 (299)
T PTZ00122 125 RLTELGKEQARITGKYLKEQFGEI-LVDKKV--KAIYHSDMTRAKETAEIISEAF 176 (299)
T ss_pred CCCHHHHHHHHHHHHHHHHhhccc-cccCCC--CEEEEcCcHHHHHHHHHHHHhC
Confidence 499999999999999998764210 000111 2578999999999999998764
No 14
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=94.01 E-value=0.11 Score=47.93 Aligned_cols=45 Identities=16% Similarity=0.206 Sum_probs=36.5
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhcc
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMGL 180 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~Gl 180 (478)
-.||+.|++|...+|++|+.. .+ -.|.||+..||++||+.++.++
T Consensus 25 ~~Lt~~G~~qa~~l~~~l~~~-------~~----~~i~sSpl~Ra~qTA~~i~~~~ 69 (204)
T TIGR03848 25 VDLDERGREQAAALAERLADL-------PI----AAIVSSPLERCRETAEPIAEAR 69 (204)
T ss_pred CCcCHHHHHHHHHHHHHHhcC-------CC----CEEEeCcHHHHHHHHHHHHHhc
Confidence 359999999999999988631 11 2578999999999999998754
No 15
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=93.97 E-value=0.14 Score=48.06 Aligned_cols=46 Identities=22% Similarity=0.103 Sum_probs=36.6
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhc
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMG 179 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~G 179 (478)
-.||+.|++|...+|++|+..- ..+ -.|.||+..||++||+.++.+
T Consensus 26 ~pLt~~G~~QA~~l~~~L~~~~-----~~~----d~i~sSpL~Ra~qTA~~i~~~ 71 (228)
T PRK14116 26 VDLSEKGVEEAKKAGRLIKEAG-----LEF----DQAYTSVLTRAIKTLHYALEE 71 (228)
T ss_pred CCcCHHHHHHHHHHHHHHHhcC-----CCC----CEEEECChHHHHHHHHHHHHh
Confidence 4699999999999999987520 011 258899999999999998764
No 16
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=93.88 E-value=0.15 Score=46.77 Aligned_cols=44 Identities=16% Similarity=0.218 Sum_probs=36.1
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhc
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMG 179 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~G 179 (478)
-.||+.|++|...+|++|+.. .+ =.|.||...||++||+.++.+
T Consensus 25 ~pLt~~G~~Qa~~~~~~l~~~-------~~----~~i~sSpl~Ra~qTA~~i~~~ 68 (199)
T PRK15004 25 TPLTARGIEQAQNLHTLLRDV-------PF----DLVLCSELERAQHTARLVLSD 68 (199)
T ss_pred CCcCHHHHHHHHHHHHHHhCC-------CC----CEEEECchHHHHHHHHHHHhc
Confidence 469999999999999988621 11 158999999999999998764
No 17
>PRK01112 phosphoglyceromutase; Provisional
Probab=93.43 E-value=0.17 Score=47.63 Aligned_cols=44 Identities=18% Similarity=0.138 Sum_probs=36.2
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhc
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMG 179 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~G 179 (478)
-.||+.|.+|...+|++|+. + .+ -.|.||+..||++||+.++..
T Consensus 26 ~~Lte~G~~Qa~~l~~~L~~-----~--~~----d~iysSpl~Ra~qTA~~i~~~ 69 (228)
T PRK01112 26 IPLSQQGIAEAIAAGEKIKD-----L--PI----DCIFTSTLVRSLMTALLAMTN 69 (228)
T ss_pred CCcCHHHHHHHHHHHHHhhc-----C--CC----CEEEEcCcHHHHHHHHHHHHh
Confidence 46999999999999998874 1 11 257999999999999988753
No 18
>PRK01295 phosphoglyceromutase; Provisional
Probab=93.34 E-value=0.19 Score=46.39 Aligned_cols=47 Identities=15% Similarity=0.073 Sum_probs=37.5
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhcc
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMGL 180 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~Gl 180 (478)
..||+.|.+|...+|++|+..... . -.|.||+..||++||+.++..+
T Consensus 27 ~~Lt~~G~~qA~~~~~~L~~~~~~-------~--d~i~sSpl~Ra~qTA~~i~~~~ 73 (206)
T PRK01295 27 PDLTEQGVAEAKAAGRKLKAAGLK-------F--DIAFTSALSRAQHTCQLILEEL 73 (206)
T ss_pred CCcCHHHHHHHHHHHHHHHhCCCC-------C--CEEEeCCcHHHHHHHHHHHHHc
Confidence 459999999999999999853211 1 1578999999999999987654
No 19
>PRK14120 gpmA phosphoglyceromutase; Provisional
Probab=92.92 E-value=0.28 Score=46.79 Aligned_cols=46 Identities=24% Similarity=0.121 Sum_probs=36.3
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhc
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMG 179 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~G 179 (478)
-.||+.|++|...+|+.|+.. .... -.|.||...||++||+.++.+
T Consensus 29 ~pLTe~G~~QA~~~a~~l~~~-------~~~~--~~IysSpl~Ra~qTA~~i~~~ 74 (249)
T PRK14120 29 VDLTEKGEAEAKRGGELLAEA-------GVLP--DVVYTSLLRRAIRTANLALDA 74 (249)
T ss_pred CCcCHHHHHHHHHHHHHHHhc-------CCCC--CEEEecChHHHHHHHHHHHHh
Confidence 469999999999999998742 1111 258899999999999988653
No 20
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=92.89 E-value=0.28 Score=46.11 Aligned_cols=46 Identities=17% Similarity=0.143 Sum_probs=36.6
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhc
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMG 179 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~G 179 (478)
-.||+.|++|...+|++|+.. ... .-.|.||+..||++||+.++..
T Consensus 26 ~pLt~~G~~QA~~l~~~L~~~-------~~~--~d~i~sSpL~Ra~~TA~~i~~~ 71 (228)
T PRK14119 26 VNLSEQGINEATRAGEKVREN-------NIA--IDVAFTSLLTRALDTTHYILTE 71 (228)
T ss_pred CCcCHHHHHHHHHHHHHHHhc-------CCC--CCEEEeCccHHHHHHHHHHHHh
Confidence 469999999999999988752 011 1258899999999999998764
No 21
>PRK03482 phosphoglycerate mutase; Provisional
Probab=92.69 E-value=0.33 Score=45.09 Aligned_cols=44 Identities=20% Similarity=0.270 Sum_probs=36.1
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhc
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMG 179 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~G 179 (478)
..||+.|++|...+|++|... .. -.|.||...||++||+.++..
T Consensus 26 ~~Lt~~G~~qA~~~~~~l~~~-------~~----~~I~sSpl~Ra~qTA~~i~~~ 69 (215)
T PRK03482 26 SPLTAKGEQQAMQVAERAKEL-------GI----THIISSDLGRTRRTAEIIAQA 69 (215)
T ss_pred CCcCHHHHHHHHHHHHHHhcC-------CC----CEEEECCcHHHHHHHHHHHHh
Confidence 569999999999999988631 11 268899999999999988754
No 22
>PRK14118 gpmA phosphoglyceromutase; Provisional
Probab=92.68 E-value=0.3 Score=45.87 Aligned_cols=46 Identities=17% Similarity=0.148 Sum_probs=37.1
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhc
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMG 179 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~G 179 (478)
-.||+.|++|...+|++|+..- .. .-.|.||+..||.+||+.+...
T Consensus 25 ~~Lt~~G~~qa~~~~~~l~~~~-------~~--~d~i~sSpl~Ra~~TA~~i~~~ 70 (227)
T PRK14118 25 VNLTERGVEEAKAAGKKLKEAG-------YE--FDIAFTSVLTRAIKTCNIVLEE 70 (227)
T ss_pred CCCCHHHHHHHHHHHHHHHhcC-------CC--CCEEEEeChHHHHHHHHHHHHh
Confidence 4699999999999999998621 11 1258899999999999998764
No 23
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=92.63 E-value=0.17 Score=45.36 Aligned_cols=44 Identities=14% Similarity=0.159 Sum_probs=36.5
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhc
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMG 179 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~G 179 (478)
..||+.|++|...+|++|+. . ..-.|.||...||++||+.++..
T Consensus 22 ~~Lt~~G~~qa~~l~~~l~~-------~----~~~~i~sSpl~Ra~qTA~~i~~~ 65 (177)
T TIGR03162 22 VPLAEKGAEQAAALREKLAD-------V----PFDAVYSSPLSRCRELAEILAER 65 (177)
T ss_pred CCcChhHHHHHHHHHHHhcC-------C----CCCEEEECchHHHHHHHHHHHhh
Confidence 57999999999999999862 1 12368899999999999998764
No 24
>PRK14115 gpmA phosphoglyceromutase; Provisional
Probab=92.62 E-value=0.31 Score=46.41 Aligned_cols=47 Identities=21% Similarity=0.095 Sum_probs=37.2
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhcc
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMGL 180 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~Gl 180 (478)
-.||+.|.+|...+|+.|+..- +.. -.|.||+..||++||+.+..++
T Consensus 25 ~pLte~G~~QA~~la~~L~~~~-------~~~--d~IysSpl~Ra~qTA~~i~~~~ 71 (247)
T PRK14115 25 VDLSEKGVSEAKAAGKLLKEEG-------YTF--DVAYTSVLKRAIRTLWIVLDEL 71 (247)
T ss_pred CCcCHHHHHHHHHHHHHHHhcC-------CCC--CEEEEcCCHHHHHHHHHHHHHc
Confidence 4599999999999999987421 111 2588999999999999987643
No 25
>smart00855 PGAM Phosphoglycerate mutase family. Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate PUBMED:2847721, PUBMED:2831102, PUBMED:10958932. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.
Probab=92.57 E-value=0.21 Score=43.60 Aligned_cols=49 Identities=20% Similarity=0.177 Sum_probs=38.6
Q ss_pred cCccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhcc
Q 011728 124 GGELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMGL 180 (478)
Q Consensus 124 ~g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~Gl 180 (478)
.-.||+.|++|...+|+.|+..- ....-.|.||...||++||+.+...+
T Consensus 23 d~~Lt~~G~~qa~~~a~~l~~~~--------~~~~~~i~sSpl~Ra~qTa~~i~~~~ 71 (155)
T smart00855 23 DSPLTELGRAQAEALGELLASLG--------RLRFDVIYSSPLLRARETAEALAIAL 71 (155)
T ss_pred CCCCCHHHHHHHHHHHHHHHhcc--------CCCCCEEEeCchHHHHHHHHHHHHhc
Confidence 35699999999999999987541 11224688999999999999987654
No 26
>PRK13463 phosphatase PhoE; Provisional
Probab=92.43 E-value=0.35 Score=44.51 Aligned_cols=43 Identities=19% Similarity=0.158 Sum_probs=34.7
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHh
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGM 178 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~ 178 (478)
-.||+.|++|...+|++|+.. .. -.|.||+..||++||+.+..
T Consensus 27 ~~Lt~~G~~Qa~~~~~~l~~~---------~~--~~i~sSpl~Ra~qTA~~i~~ 69 (203)
T PRK13463 27 SALTENGILQAKQLGERMKDL---------SI--HAIYSSPSERTLHTAELIKG 69 (203)
T ss_pred CCcCHHHHHHHHHHHHHhcCC---------CC--CEEEECCcHHHHHHHHHHHh
Confidence 579999999999999987531 11 25779999999999998754
No 27
>KOG0235 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=92.40 E-value=0.21 Score=46.01 Aligned_cols=48 Identities=19% Similarity=0.165 Sum_probs=39.1
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhccC
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMGLF 181 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~Glf 181 (478)
-.||+.|.+|+..+|++++.+=.. ...+.||+..|+.+||+.++...-
T Consensus 30 ~~Lte~G~~qA~~~~~~l~~~~~~---------~~~~~tS~l~RakqT~~~il~~~~ 77 (214)
T KOG0235|consen 30 APLTEKGEEQAKAAAQRLKDLNIE---------FDVCYTSDLKRAKQTAELILEELK 77 (214)
T ss_pred CccChhhHHHHHHHHHHHHhcCCc---------ccEEecCHHHHHHHHHHHHHHhhc
Confidence 399999999999999988865322 123378999999999999998865
No 28
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1. Most members of this family are phosphoglycerate mutase (EC 5.4.2.1). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (EC 5.4.2.4). This model is designated as a subfamily for this reason. The second and third paralogs in S. cerevisiae are somewhat divergent and apparently inactive (see PUBMED:9544241) but are also part of this subfamily phylogenetically.
Probab=91.86 E-value=0.37 Score=45.80 Aligned_cols=47 Identities=21% Similarity=0.097 Sum_probs=37.7
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhcc
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMGL 180 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~Gl 180 (478)
-.||+.|++|...+|++|...- ... -.|.||+..||++||+-+...+
T Consensus 25 ~~Lt~~G~~QA~~la~~L~~~~-------~~~--d~iysSpl~Ra~qTA~ii~~~~ 71 (245)
T TIGR01258 25 VKLSEKGQQEAKRAGELLKEEG-------YEF--DVAYTSLLKRAIHTLNIALDEL 71 (245)
T ss_pred CCcCHHHHHHHHHHHHHHHhcC-------CCC--CEEEEcChHHHHHHHHHHHHhc
Confidence 5799999999999999997421 111 1588999999999999987654
No 29
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional
Probab=91.32 E-value=0.38 Score=48.79 Aligned_cols=46 Identities=20% Similarity=0.203 Sum_probs=37.8
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhcc
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMGL 180 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~Gl 180 (478)
-.||+.|++|...+|++|+... .. + .|.||...||++||+.+..++
T Consensus 196 ~~Lt~~G~~QA~~l~~~l~~~~------~~--d--~i~sSpl~Ra~qTA~~i~~~~ 241 (372)
T PRK07238 196 PELTEVGRRQAAAAARYLAARG------GI--D--AVVSSPLQRARDTAAAAAKAL 241 (372)
T ss_pred CCcCHHHHHHHHHHHHHHhccC------CC--C--EEEECChHHHHHHHHHHHHhc
Confidence 5699999999999999887531 11 1 588999999999999988765
No 30
>PRK06193 hypothetical protein; Provisional
Probab=90.44 E-value=0.77 Score=42.29 Aligned_cols=44 Identities=16% Similarity=0.091 Sum_probs=35.3
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHH
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFG 177 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~ 177 (478)
-.||+.|++|...+|++|++.- ..++ .|.+|...||.+||+.+.
T Consensus 72 rpLt~~G~~qA~~l~~~L~~~~-------~~~d--~V~sSpl~Ra~qTA~il~ 115 (206)
T PRK06193 72 RNLSEEGREQARAIGEAFRALA-------IPVG--KVISSPYCRAWETAQLAF 115 (206)
T ss_pred CCCCHHHHHHHHHHHHHHHhcC-------CCCC--EEEECCcHHHHHHHHHHh
Confidence 4799999999999999998632 1122 578999999999998754
No 31
>PTZ00123 phosphoglycerate mutase like-protein; Provisional
Probab=90.07 E-value=0.49 Score=44.70 Aligned_cols=48 Identities=23% Similarity=0.122 Sum_probs=38.6
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhccC
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMGLF 181 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~Glf 181 (478)
-.||+.|++|...+|+.|+..= ... -.|.||+..||++||+.+..++-
T Consensus 13 ~pLTe~G~~QA~~l~~~L~~~~-------~~~--d~iysSpl~Ra~qTA~~i~~~~~ 60 (236)
T PTZ00123 13 VPLSEKGVQEAREAGKLLKEKG-------FRF--DVVYTSVLKRAIKTAWIVLEELG 60 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcC-------CCC--CEEEECChHHHHHHHHHHHHhcC
Confidence 4699999999999999998531 111 25789999999999999987763
No 32
>PRK14117 gpmA phosphoglyceromutase; Provisional
Probab=90.04 E-value=0.81 Score=43.03 Aligned_cols=45 Identities=20% Similarity=0.056 Sum_probs=35.5
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHh
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGM 178 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~ 178 (478)
-.||+.|++|...+|++|+... ... -.|.||+..||++||+.++.
T Consensus 26 ~~Lt~~G~~qa~~~~~~l~~~~-------~~~--~~i~sSpl~Ra~~TA~~i~~ 70 (230)
T PRK14117 26 VDLSEKGTQQAIDAGKLIKEAG-------IEF--DLAFTSVLKRAIKTTNLALE 70 (230)
T ss_pred CCcCHHHHHHHHHHHHHHHHcC-------CCC--CEEEECCcHHHHHHHHHHHH
Confidence 4599999999999999987521 111 24789999999999998764
No 33
>TIGR00249 sixA phosphohistidine phosphatase SixA.
Probab=89.25 E-value=0.68 Score=40.46 Aligned_cols=47 Identities=21% Similarity=0.129 Sum_probs=38.2
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhcc
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMGL 180 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~Gl 180 (478)
=.||+.|++|...+|++|+..- +.+ -.|.+|...||++||+.+...+
T Consensus 21 r~Lt~~G~~qa~~~~~~l~~~~-------~~~--d~i~sSp~~Ra~qTa~~l~~~~ 67 (152)
T TIGR00249 21 RPLTTNGCDESRLVAQWLKGQG-------VEI--ERILVSPFVRAEQTAEIVGDCL 67 (152)
T ss_pred CCcCHHHHHHHHHHHHHHHhCC-------CCC--CEEEECCcHHHHHHHHHHHHHc
Confidence 4699999999999999987631 111 2688999999999999988775
No 34
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=89.00 E-value=0.92 Score=40.02 Aligned_cols=49 Identities=16% Similarity=0.088 Sum_probs=40.7
Q ss_pred cCccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhccC
Q 011728 124 GGELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMGLF 181 (478)
Q Consensus 124 ~g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~Glf 181 (478)
.=.||+.|++|...+|++|+.+=. .+ =.|-+|..-||.|||+.+...|-
T Consensus 23 dR~Lt~~G~~ea~~~a~~L~~~~~-------~~--D~VL~Spa~Ra~QTae~v~~~~~ 71 (163)
T COG2062 23 DRPLTERGRKEAELVAAWLAGQGV-------EP--DLVLVSPAVRARQTAEIVAEHLG 71 (163)
T ss_pred cCcCCHHHHHHHHHHHHHHHhcCC-------CC--CEEEeChhHHHHHHHHHHHHhhC
Confidence 356999999999999999998753 11 24778999999999999988876
No 35
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=87.74 E-value=0.78 Score=41.95 Aligned_cols=44 Identities=23% Similarity=0.325 Sum_probs=36.0
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHh
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGM 178 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~ 178 (478)
-.||+.|++|...+|++|++.- . . ..|.+|+..||.+||+.+..
T Consensus 78 RpLTerG~~qA~~lg~~L~~~~-------~--~-d~I~sSpa~Ra~qTAe~ia~ 121 (201)
T PRK15416 78 TGITVKGTQDARELGKAFSADI-------P--D-YDLYSSNTVRTIQSATWFSA 121 (201)
T ss_pred CCCCHHHHHHHHHHHHHHhCCC-------C--C-CEEEECCCHHHHHHHHHHhc
Confidence 4699999999999999997431 1 1 26789999999999999865
No 36
>PRK10848 phosphohistidine phosphatase; Provisional
Probab=84.85 E-value=1.4 Score=38.86 Aligned_cols=47 Identities=17% Similarity=0.087 Sum_probs=37.7
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhcc
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMGL 180 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~Gl 180 (478)
-.||+.|++|...+|++|+..- ..+ =.|.+|...||.+||+.+...+
T Consensus 21 rpLt~~G~~qa~~~~~~l~~~~-------~~~--d~i~sSp~~Ra~qTa~~l~~~~ 67 (159)
T PRK10848 21 RPLTTCGCDESRLMANWLKGQK-------VDI--ERVLVSPYLRAEQTLEVVGECL 67 (159)
T ss_pred CCcCHHHHHHHHHHHHHHHhCC-------CCC--CEEEECCHHHHHHHHHHHHHHh
Confidence 4699999999999999987531 111 2688999999999999987664
No 37
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=84.30 E-value=1.7 Score=47.76 Aligned_cols=47 Identities=11% Similarity=0.153 Sum_probs=37.3
Q ss_pred cCccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHh
Q 011728 124 GGELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGM 178 (478)
Q Consensus 124 ~g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~ 178 (478)
.-.||+.|++|...+|++|+... . .....|+||+..||++||+.+..
T Consensus 441 d~pLt~~G~~qA~~l~~~l~~~~------~--~~~~~V~sSpl~Ra~~TA~~i~~ 487 (664)
T PTZ00322 441 NSRLTERGRAYSRALFEYFQKEI------S--TTSFTVMSSCAKRCTETVHYFAE 487 (664)
T ss_pred CCccCHHHHHHHHHHHHHHHhcc------C--CCCcEEEcCCcHHHHHHHHHHHh
Confidence 45799999999999999886531 0 11247999999999999998754
No 38
>PRK13462 acid phosphatase; Provisional
Probab=82.92 E-value=2.1 Score=39.43 Aligned_cols=43 Identities=21% Similarity=0.076 Sum_probs=33.9
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHH
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAF 176 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af 176 (478)
-.||+.|++|...+|++|+.. .++ ...|.||+..||.+||+.+
T Consensus 30 ~pLt~~G~~QA~~l~~~l~~~-------~~~--~~~i~sSpl~Ra~qTA~~i 72 (203)
T PRK13462 30 LELTETGRTQAELAGQALGEL-------ELD--DPLVISSPRRRALDTAKLA 72 (203)
T ss_pred CCCCHHHHHHHHHHHHHHHhC-------CCC--CCEEEECchHHHHHHHHHh
Confidence 359999999999999988641 111 1258899999999999975
No 39
>KOG4754 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=81.78 E-value=2.6 Score=38.46 Aligned_cols=50 Identities=16% Similarity=0.127 Sum_probs=35.6
Q ss_pred cCccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhcc
Q 011728 124 GGELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMGL 180 (478)
Q Consensus 124 ~g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~Gl 180 (478)
...||+.|++|..+|++.+...= ++. ..=.|.+|.--||++||.--..|-
T Consensus 45 D~~LTplG~~Qv~~l~~~~~A~q---L~~----~ieliv~SPMrRtLqT~v~~f~~~ 94 (248)
T KOG4754|consen 45 DPHLTPLGWKQVDNLRKHLMAKQ---LPN----KIELIVVSPMRRTLQTMVIAFGGY 94 (248)
T ss_pred ccccCHHHHHHHHHHhhhhhhhh---cCC----ceeEEEechHHHHHHHHHHHhcce
Confidence 47899999999999998554321 111 112467888999999998665554
No 40
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=72.72 E-value=6.3 Score=37.69 Aligned_cols=48 Identities=15% Similarity=-0.016 Sum_probs=37.8
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhccC
Q 011728 125 GELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMGLF 181 (478)
Q Consensus 125 g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~Glf 181 (478)
-=||..|.-|....|+.|+.+-.. + -.+..+...||++||...+.|+=
T Consensus 68 ~pit~~g~~~~~~~gr~l~~a~~~-------i--~~ifcSPs~r~VqTa~~i~~~~g 115 (272)
T KOG3734|consen 68 PPITVSGFIQCKLIGRELLNAGIA-------I--DVIFCSPSLRCVQTAAKIKKGLG 115 (272)
T ss_pred CCccchhHHHHHHHHHHHHhcCCC-------c--ceeecCCchhHHHHHHHHHHhhc
Confidence 339999999999999988765421 1 24567888999999999999973
No 41
>COG3422 Uncharacterized conserved protein [Function unknown]
Probab=46.49 E-value=26 Score=24.92 Aligned_cols=25 Identities=16% Similarity=0.171 Sum_probs=20.3
Q ss_pred eEEEEeeCCCCCCCCeEEEEEe-cccccc
Q 011728 400 NMLVLYSCPANSSDKYFVQVLH-NEHPTP 427 (478)
Q Consensus 400 l~~El~~~~~~~~~~~~Vrvl~-N~~~~~ 427 (478)
.-||+|++.+ +++..|+.. |++.+-
T Consensus 3 ~kfei~kdk~---Ge~rfrlkA~N~eiI~ 28 (59)
T COG3422 3 GKFEIYKDKA---GEYRFRLKAANGEIIL 28 (59)
T ss_pred ceEEEEEcCC---CcEEEEEEccCccEEE
Confidence 4699999874 889999998 888764
No 42
>PF15284 PAGK: Phage-encoded virulence factor
Probab=45.17 E-value=17 Score=25.99 Aligned_cols=23 Identities=22% Similarity=0.391 Sum_probs=19.3
Q ss_pred CcchhHHHHHHHHHHHhhhcccc
Q 011728 1 MKKATASFMLILCVLLLTHLNDA 23 (478)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~ 23 (478)
|||.+-+|+..++++++..|++.
T Consensus 1 Mkk~ksifL~l~~~LsA~~FSas 23 (61)
T PF15284_consen 1 MKKFKSIFLALVFILSAAGFSAS 23 (61)
T ss_pred ChHHHHHHHHHHHHHHHhhhhHH
Confidence 89999999999999888777654
No 43
>cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent Hi
Probab=35.49 E-value=43 Score=28.34 Aligned_cols=46 Identities=22% Similarity=0.164 Sum_probs=34.7
Q ss_pred cCcEEEeecccchHHHHHHhccccccchhhhhcccCCCCCCCCCCCCCCeeeeccccccceeEEEEeeC
Q 011728 339 EKARLRFAHAETVIPFTCLLGLFLERSEFQQIQKEEPLALPPKPPQSRNWRGSILAPFTGNNMLVLYSC 407 (478)
Q Consensus 339 ~k~~l~f~HD~ti~~ll~aLgl~~~~~~l~~~~~~~pl~~~~~~~~~r~w~~s~i~Pfas~l~~El~~~ 407 (478)
.+..+.+||+.+|..++..|+-..... .| ...+|+++.+.+|++.|
T Consensus 99 ~~~iliv~H~~~i~~~~~~l~~~~~~~---------------------~~--~~~~~~~~~~~~~~~~~ 144 (153)
T cd07040 99 GKNVLIVSHGGTIRALLAALLGLSDEE---------------------IL--SLNLPNGSILVLELDEC 144 (153)
T ss_pred CCEEEEEeCCHHHHHHHHHHhCcCHHH---------------------hc--cccCCCCceEEEEEcCC
Confidence 366899999999999999988642110 00 13578999999999987
No 44
>KOG4609 consensus Predicted phosphoglycerate mutase [General function prediction only]
Probab=33.23 E-value=44 Score=30.73 Aligned_cols=50 Identities=20% Similarity=0.124 Sum_probs=38.2
Q ss_pred cccCccchhhHHHHHHHHHHHHHHchhhhcCCCCCCceEEEeccCchHHHHHHHHHhcc
Q 011728 122 LKGGELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAFGMGL 180 (478)
Q Consensus 122 ~~~g~LT~~G~~q~~~lG~~lr~rY~~ll~~~~~~~~i~vrST~~~Rt~~SA~af~~Gl 180 (478)
.....||+.|++|.-..|+||++.=.. ++ .|.++.-.|+.++|.-.+.-|
T Consensus 109 g~~~hLTelGReQAE~tGkRL~elglk-----~d----~vv~StM~RA~ETadIIlk~l 158 (284)
T KOG4609|consen 109 GSLEHLTELGREQAELTGKRLAELGLK-----FD----KVVASTMVRATETADIILKHL 158 (284)
T ss_pred CchhhcchhhHHHHHHHhHHHHHcCCc-----hh----hhhhhhhhhhHHHHHHHHHhC
Confidence 345699999999999999999975332 21 244666789999999888765
No 45
>PRK14758 hypothetical protein; Provisional
Probab=28.06 E-value=61 Score=18.95 Aligned_cols=15 Identities=33% Similarity=0.733 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHhhhc
Q 011728 6 ASFMLILCVLLLTHL 20 (478)
Q Consensus 6 ~~~~~~~~~~~~~~~ 20 (478)
.++++|+|.+++.++
T Consensus 10 iLivlIlCalia~~f 24 (27)
T PRK14758 10 ILIILILCALIAARF 24 (27)
T ss_pred HHHHHHHHHHHHHHh
Confidence 457788888888776
No 46
>PTZ00264 circumsporozoite-related antigen; Provisional
Probab=27.10 E-value=55 Score=26.91 Aligned_cols=22 Identities=32% Similarity=0.461 Sum_probs=14.8
Q ss_pred CcchhHHHHHHHHHHHhhhccc
Q 011728 1 MKKATASFMLILCVLLLTHLND 22 (478)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~ 22 (478)
||-++++|+|+|.++.--++..
T Consensus 1 mkils~vFllF~~il~~~a~g~ 22 (148)
T PTZ00264 1 MKLLSAVFLLFCAILCKHALGE 22 (148)
T ss_pred ChHHHHHHHHHHHHHhHHhhcc
Confidence 8889999886665555444433
No 47
>PF06589 CRA: Circumsporozoite-related antigen (CRA); InterPro: IPR009512 The mode of choroquine action or resistance of the malarial parasite Plasmodium falciparum is not fully elucidated and presents a huge challenge world wide. Plasmodial EXP-1 protein, also called circumsporozoite-related antigen, changes under chloroquine treatment, making it a potential chloroquine resistance marker []. Although there are no authentic repeats in this antigen, there are a number of internal homologies (N-A-N-P) and (N-A-D-P). The first of these tetramers is the dominant repeat found in the circumsporozoite protein (CSP) of P. falciparum and reacts with antibodies against circumsporozoite-related antigen (CRA). It is possible that immune responses to CRA may act against the CSP also. The CRA is found in many parasitic strains.
Probab=22.39 E-value=1e+02 Score=25.88 Aligned_cols=20 Identities=35% Similarity=0.361 Sum_probs=12.4
Q ss_pred CcchhHHHHHHHHHHHhhhc
Q 011728 1 MKKATASFMLILCVLLLTHL 20 (478)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~ 20 (478)
||-++++|+++|.+++--+.
T Consensus 1 mkl~s~~FllF~~il~~~A~ 20 (157)
T PF06589_consen 1 MKLLSAFFLLFCLILCDHAL 20 (157)
T ss_pred CcHHHHHHHHHHHHHhhhhh
Confidence 78888888855544433333
No 48
>cd00280 TRFH Telomeric Repeat binding Factor or TTAGGG Repeat binding Factor, central (dimerization) domain Homology; TRFH. Telomeres are protein/DNA complexes that make up the physical ends of eukaryotic linear chromosomes and are essential for chromosome stability, protecting the chromosome ends from degradation and end-to-end fusion. Proteins TRF1, TRF2 and Taz1 bind telomeric DNA and are also involved in recruiting interacting proteins, TIN2, and Rap1, to the telomeres. It has also been demonstrated that PARP1 associates with TRF2 and is capable of poly(ADP-ribosyl)ation of TRF2, which affects binding of TRF2 to telomeric DNA. TRF1, TRF2 and Taz1 proteins contain three functional domains: an N-terminal acidic domain, a central TRF-specific/dimerization domain, and a C-terminal DNA binding domain with a single Myb-like repeat. Homodimerization, a prerequisite to DNA binding, results in the juxtaposition of two Myb DNA binding domains.
Probab=21.54 E-value=65 Score=29.05 Aligned_cols=73 Identities=15% Similarity=0.231 Sum_probs=41.0
Q ss_pred ccCCChhHHhhhhhhhhHHHHHHhcCCCchhhhhchHHHHHHHHHHHHhhhhcccCCCCCcccCcEEEeecccchHHHHH
Q 011728 277 CGLFSPSEVALLEWTDDLEVFILKGYGKSLNYRMGVPLLEDIVQSMEQAINAKEEKHTSGNYEKARLRFAHAETVIPFTC 356 (478)
Q Consensus 277 c~~ft~~e~~~~ey~~dl~~y~~~g~g~~~~~~~g~~ll~~i~~~l~~~~~~~~~~~~~~~~~k~~l~f~HD~ti~~ll~ 356 (478)
|..|.++....+....|+......|+-.--....-...+=.++.|+.+ | .++-..|-||+.|.||-+
T Consensus 21 c~aFR~~r~~dFr~~rdi~e~ll~~~~~~~a~~~k~l~i~QfLsRI~e---G----------~~LD~~Fd~~~~~TPLES 87 (200)
T cd00280 21 CRAFREGRYEDFRRTRDIAEALLVGPLKLTATQLKTLRIMQFLSRIAE---G----------KNLDCQFENDEELTPLES 87 (200)
T ss_pred HHHHHccChHHHHHHHHHHHHHHhccccccccchhHhHHHHHHHHHHc---C----------CCCCCccCCCCCcChHHH
Confidence 444544444555566676666655543211111111123334445432 2 355667999999999999
Q ss_pred Hhcccc
Q 011728 357 LLGLFL 362 (478)
Q Consensus 357 aLgl~~ 362 (478)
||++++
T Consensus 88 Al~v~~ 93 (200)
T cd00280 88 ALMVLE 93 (200)
T ss_pred HHHHHH
Confidence 999963
Done!