Query 011729
Match_columns 478
No_of_seqs 120 out of 1325
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 14:09:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011729.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011729hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rtk_A 60 kDa chaperonin 2; he 100.0 1E-103 4E-108 843.8 39.1 453 5-478 52-514 (546)
2 1kp8_A Groel protein; chaperon 100.0 3E-102 1E-106 834.7 42.2 455 5-478 52-516 (547)
3 1we3_A CPN60(groel); chaperoni 100.0 3E-101 1E-105 827.8 45.0 455 5-478 52-518 (543)
4 1iok_A Chaperonin 60; chaperon 100.0 3E-102 1E-106 835.0 35.6 456 5-478 53-518 (545)
5 3p9d_C T-complex protein 1 sub 100.0 3.2E-87 1.1E-91 723.3 28.9 431 5-478 61-579 (590)
6 3ruv_A Chaperonin, CPN; double 100.0 3.7E-85 1.3E-89 704.3 37.9 401 5-478 61-512 (543)
7 3iyg_H T-complex protein 1 sub 100.0 7.7E-85 2.6E-89 697.9 40.0 404 5-478 53-507 (515)
8 3ko1_A Chaperonin; 9-fold symm 100.0 3.8E-85 1.3E-89 704.7 37.0 401 5-478 72-526 (553)
9 3iyg_B T-complex protein 1 sub 100.0 1.3E-84 4.6E-89 696.1 40.6 400 5-478 54-504 (513)
10 3aq1_B Thermosome subunit; gro 100.0 5.1E-85 1.7E-89 697.4 37.1 401 5-478 15-469 (500)
11 3p9d_A T-complex protein 1 sub 100.0 2.3E-85 8E-90 707.7 31.6 406 5-478 66-541 (559)
12 3iyg_A T-complex protein 1 sub 100.0 7.5E-84 2.6E-88 692.6 38.9 406 5-478 52-521 (529)
13 3p9d_D T-complex protein 1 sub 100.0 5.7E-85 1.9E-89 700.8 29.9 405 5-478 61-521 (528)
14 1q3q_A Thermosome alpha subuni 100.0 4.4E-84 1.5E-88 696.7 36.5 401 5-478 65-518 (548)
15 3iyg_E T-complex protein 1 sub 100.0 1.6E-83 5.4E-88 688.5 40.6 408 5-478 52-508 (515)
16 1a6d_A Thermosome (alpha subun 100.0 4.6E-84 1.6E-88 696.1 36.6 400 5-478 64-515 (545)
17 1a6d_B Thermosome (beta subuni 100.0 6.1E-84 2.1E-88 695.3 35.6 401 5-478 63-516 (543)
18 3iyg_D T-complex protein 1 sub 100.0 2.3E-83 7.9E-88 687.3 38.7 401 5-478 53-511 (518)
19 3iyg_Q T-complex protein 1 sub 100.0 1.3E-82 4.4E-87 680.9 39.6 407 5-478 53-505 (512)
20 3iyg_G T-complex protein 1 sub 100.0 2.7E-82 9.1E-87 678.6 39.3 401 5-478 51-507 (515)
21 3p9d_E T-complex protein 1 sub 100.0 5.4E-83 1.8E-87 689.6 32.4 407 5-478 87-551 (562)
22 3p9d_G T-complex protein 1 sub 100.0 7.8E-84 2.7E-88 694.5 24.8 403 5-478 66-520 (550)
23 3iyg_Z T-complex protein 1 sub 100.0 2.5E-82 8.4E-87 678.8 36.0 400 5-478 52-510 (517)
24 3p9d_B T-complex protein 1 sub 100.0 1.7E-83 5.6E-88 690.1 26.0 400 5-478 60-511 (527)
25 3p9d_F T-complex protein 1 sub 100.0 1.2E-81 4E-86 678.0 25.3 401 5-478 59-530 (546)
26 3p9d_H T-complex protein 1 sub 100.0 3.5E-81 1.2E-85 676.2 18.6 401 5-478 68-541 (568)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 2.5E-48 8.5E-53 355.9 14.2 189 140-328 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 7.8E-47 2.7E-51 346.6 16.0 185 143-327 12-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 7.2E-38 2.5E-42 274.2 15.0 144 145-288 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 1.1E-21 3.9E-26 181.6 13.2 144 139-336 3-174 (178)
31 1ass_A Thermosome; chaperonin, 99.8 4.3E-18 1.5E-22 154.7 13.2 127 143-292 1-154 (159)
No 1
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1.2e-103 Score=843.80 Aligned_cols=453 Identities=32% Similarity=0.478 Sum_probs=423.1
Q ss_pred HHHHhhhccccCcc----cccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINTT----GTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADA 79 (478)
Q Consensus 5 ~~~il~~~~~~~p~----~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~-G~~P~~I~~G~~~A~~~ 79 (478)
..||||+|++.||+ +|++ +++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.
T Consensus 52 G~TIlk~i~v~hp~~n~gAkll------~e~a~~qd~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~ 125 (546)
T 3rtk_A 52 GVSIAKEIELEDPYEKIGAELV------KEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEK 125 (546)
T ss_dssp ---------CCCHHHHHHHHHH------HHHHTSCC-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCChhhhHHHHHH------HHHHHhhhhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 36899999999999 6676 5888899999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhccCCceeEecCCCccceeEEEeeEEEeccccCCcccc
Q 011729 80 VVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFT 159 (478)
Q Consensus 80 ~~~~L~~~s~~v~~~~~l~~vA~ts~~~~~~la~li~~a~~~vg~~~~I~v~~g~~~~d~~~lv~G~~~~~g~~~~~~~~ 159 (478)
++++|+++++|+++.++|.++|++|++ ++.+++++++|+.+++.+|.|+|+.+++..+++++++||+||++|.||||++
T Consensus 126 a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~~liadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt 204 (546)
T 3rtk_A 126 VTETLLKGAKEVETKEQIAATAAISAG-DQSIGDLIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVT 204 (546)
T ss_dssp HHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCS
T ss_pred HHHHHHHhcccCCChHHHHhHeEEeCC-chHHHHHHHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCccccc
Confidence 999999999999988999999999998 8899999999999999999999998888878999999999999999999999
Q ss_pred ccccceeeecCceEEEeccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhhhhhHHhhhcCCCccEEEEEecccchhhh
Q 011729 160 HKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRK 239 (478)
Q Consensus 160 ~~~~~~~~l~~~~Ili~d~~i~~~~~i~~~le~i~~~~~~lvIi~~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk 239 (478)
++++|+.+++||+|+++|.+|+++++++++++++.++|+||||++++|+++++++|+.|+++|++++++||.|+||+.|+
T Consensus 205 ~~e~m~~~len~kIll~d~kIs~~~~l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk 284 (546)
T 3rtk_A 205 DPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRK 284 (546)
T ss_dssp BTTTTBEEEESCEEEEBSSEECCSTTTHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHH
T ss_pred CcccCeeEecccEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhcch----HHHH
Q 011729 240 AIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLK 315 (478)
Q Consensus 240 ~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~g~~~~~~i~~~~~~l~~~i~~~~s----~~l~ 315 (478)
++|+|||++|||++++++.+++++++++++||+|++|+++++++++|+||++++++..|+++|++++++++| ++|+
T Consensus 285 ~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~ 364 (546)
T 3rtk_A 285 AMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQ 364 (546)
T ss_dssp HHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHH
T ss_pred hhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHH
Confidence 999999999999999998899999999999999999999999999999999999999999999999999888 9999
Q ss_pred HHHhhhcCCeEEEEeccCchhHHHHHHHHHHHHHHHHHHHHHcCCcCCchHHHHHHHHHHHhhcCCChhhHHHHHHHHHH
Q 011729 316 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNA 395 (478)
Q Consensus 316 ~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~DAl~a~r~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~~~~gi~~~a~A 395 (478)
|||++|+|++|||+|||+|+++++|+||+++||||++|+++++|+|||||++|++++..|++++ .++++|+|+++|++|
T Consensus 365 erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~giVpGGGa~e~~~s~~L~~~~-~~g~eq~~i~~~a~A 443 (546)
T 3rtk_A 365 ERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAAPTLDELK-LEGDEATGANIVKVA 443 (546)
T ss_dssp HHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHTTGGGSTTSC-CCTTHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCCcccCCcHHHHHHHHHHHHhc-cccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999887 789999999999999
Q ss_pred HHHHHHHHHHhcCCChHHH-HHHHhcCCCCeeEeCCCCCcccccccCCCCCcccccccCCccccccHHHHHHHHHHHHHH
Q 011729 396 LKMAAYLIASNAGVDGSVI-DKLLEQDSSDLGYNPARGRWECFHFFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMISL 474 (478)
Q Consensus 396 L~~~~~~La~NaG~d~~~v-~~l~~~~~~~~G~d~~~~~~~~~~~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A~~ 474 (478)
|+.||++||+|||+|+.++ ++|++. ...+|||+.+| +++||++.|||||+.||+++|++|+|+|++
T Consensus 444 Le~ip~~La~NaG~d~~~vv~~l~~~-~~~~G~d~~~g------------~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~ 510 (546)
T 3rtk_A 444 LEAPLKQIAFNSGLEPGVVAEKVRNL-PAGHGLNAQTG------------VYEDLLAAGVADPVKVTRSALQNAASIAGL 510 (546)
T ss_dssp TTHHHHHHHTTTTCCHHHHHHHHHHS-CTTEECCSSSC------------CCEETTTTTCEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHhh-cCCEeEcCCCC------------cEeeHHHcCCEecHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 999875 34589999999 999999999999999999999999999999
Q ss_pred HhcC
Q 011729 475 KNAI 478 (478)
Q Consensus 475 iL~i 478 (478)
||+|
T Consensus 511 iL~i 514 (546)
T 3rtk_A 511 FLTT 514 (546)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 9986
No 2
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=3e-102 Score=834.72 Aligned_cols=455 Identities=34% Similarity=0.500 Sum_probs=440.7
Q ss_pred HHHHhhhccccCc----ccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINT----TGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADA 79 (478)
Q Consensus 5 ~~~il~~~~~~~p----~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~-G~~P~~I~~G~~~A~~~ 79 (478)
..||||+|++.|| .+|++ +++|++||+++||||||+||||++||+++.+++. |+||+.|++||++|++.
T Consensus 52 G~tIlk~i~~~hp~en~~Akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~ 125 (547)
T 1kp8_A 52 GVSVAREIELEDKFENMGAQMV------KEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTV 125 (547)
T ss_dssp HHHHHHHCCCSSHHHHHHHHHH------HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccccChhhhHHHHHH------HHHHHhhccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 4689999999999 88887 4888899999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhccCCceeEecCCCccceeEEEeeEEEeccccCCcccc
Q 011729 80 VVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFT 159 (478)
Q Consensus 80 ~~~~L~~~s~~v~~~~~l~~vA~ts~~~~~~la~li~~a~~~vg~~~~I~v~~g~~~~d~~~lv~G~~~~~g~~~~~~~~ 159 (478)
++++|+++++|+++.++|.++|++|++++++|++++++|+.+++++|.|+|++|++++|++++++|++||+||.||||++
T Consensus 126 a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~liadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt 205 (547)
T 1kp8_A 126 AVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFIN 205 (547)
T ss_dssp HHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCS
T ss_pred HHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHHHHHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCcccccccc
Confidence 99999999999988899999999999889999999999999999999999999999988779999999999999999999
Q ss_pred ccccceeeecCceEEEeccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhhhhhHHhhhcCCCccEEEEEecccchhhh
Q 011729 160 HKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRK 239 (478)
Q Consensus 160 ~~~~~~~~l~~~~Ili~d~~i~~~~~i~~~le~i~~~~~~lvIi~~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk 239 (478)
++++|+.+++||+|+++|++|+++++++++++++.++|+||||++++|+++++++|+.|+++|.++|+|||.|+||+.|+
T Consensus 206 ~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk 285 (547)
T 1kp8_A 206 KPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRK 285 (547)
T ss_dssp BTTTTBEEEESCEEECEESEECCGGGTHHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHH
T ss_pred CcccCceEecCceEEEEcCcCCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhcch----HHHH
Q 011729 240 AIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLK 315 (478)
Q Consensus 240 ~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~g~~~~~~i~~~~~~l~~~i~~~~s----~~l~ 315 (478)
++|+|||++|||++++++.+++++++++++||+|++|+++++++++|+||+++++++.|+++++.+++.++| ++|+
T Consensus 286 ~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~ 365 (547)
T 1kp8_A 286 AMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQ 365 (547)
T ss_dssp HHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHH
T ss_pred HHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHH
Confidence 999999999999999998888999999999999999999999999999999999999999999999998888 9999
Q ss_pred HHHhhhcCCeEEEEeccCchhHHHHHHHHHHHHHHHHHHHHHcCCcCCchHHHHHHHHHHHhhcCCChhhHHHHHHHHHH
Q 011729 316 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNA 395 (478)
Q Consensus 316 ~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~DAl~a~r~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~~~~gi~~~a~A 395 (478)
|||+||+|++|||+|||+|+++++|+||+++||||++|+++++|+|||||++|++++..|++++..++++|+|+++|++|
T Consensus 366 erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~A 445 (547)
T 1kp8_A 366 ERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNADQNVGIKVALRA 445 (547)
T ss_dssp HHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHTTTCCCSSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCCEEeCCcHHHHHHHHHHHHHhccCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998865688999999999999
Q ss_pred HHHHHHHHHHhcCCChHHH-HHHHhcCCCCeeEeCCCCCcccccccCCCCCcccccccCCccccccHHHHHHHHHHHHHH
Q 011729 396 LKMAAYLIASNAGVDGSVI-DKLLEQDSSDLGYNPARGRWECFHFFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMISL 474 (478)
Q Consensus 396 L~~~~~~La~NaG~d~~~v-~~l~~~~~~~~G~d~~~~~~~~~~~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A~~ 474 (478)
|+.||++||+|||+|+.++ ++|++. +.++|||+.+| +++||++.|||||+.||+++|++|+++|++
T Consensus 446 Le~ip~~la~NaG~d~~~vv~~l~~~-~~~~G~d~~~g------------~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~ 512 (547)
T 1kp8_A 446 MEAPLRQIVLNCGEEPSVVANTVKGG-DGNYGYNAATE------------EYGNMIDMGILDPTKVTRSALQYAASVAGL 512 (547)
T ss_dssp TTHHHHHHHHHHTSCHHHHHHHHHHS-CTTEEEETTTT------------EEEETTTTTCEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHhc-CCCEeEeCCCC------------ccccchhcCceechHhHHHHHHHHHHHHHH
Confidence 9999999999999999999 999875 46899999999 999999999999999999999999999999
Q ss_pred HhcC
Q 011729 475 KNAI 478 (478)
Q Consensus 475 iL~i 478 (478)
||+|
T Consensus 513 iL~i 516 (547)
T 1kp8_A 513 MITT 516 (547)
T ss_dssp HHTE
T ss_pred HHhH
Confidence 9986
No 3
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=2.9e-101 Score=827.82 Aligned_cols=455 Identities=35% Similarity=0.523 Sum_probs=440.3
Q ss_pred HHHHhhhccccCc----ccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINT----TGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADA 79 (478)
Q Consensus 5 ~~~il~~~~~~~p----~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~-G~~P~~I~~G~~~A~~~ 79 (478)
..||||+|++.|| .+|++ +++|++||+++||||||+||||++||+++.+++. |+||+.|++||++|++.
T Consensus 52 G~tIlk~i~~~hp~en~~Akll------~e~a~~qd~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~ 125 (543)
T 1we3_A 52 GVTVAKEVELEDHLENIGAQLL------KEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEA 125 (543)
T ss_dssp HHHHHHHCCCSSHHHHHHHHHH------HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccCChHHhHHHHHH------HHHHHhhheecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 4689999999999 88888 4888899999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhccCCceeEecCCCccceeEEEeeEEEeccccCCcccc
Q 011729 80 VVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFT 159 (478)
Q Consensus 80 ~~~~L~~~s~~v~~~~~l~~vA~ts~~~~~~la~li~~a~~~vg~~~~I~v~~g~~~~d~~~lv~G~~~~~g~~~~~~~~ 159 (478)
++++|+++++|+++.++|.++|++|++ ++.+++++++|+.+++.+|.|+|++|++++|++++++|++|++||.+|||++
T Consensus 126 a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt 204 (543)
T 1we3_A 126 AVEKIKALAIPVEDRKAIEEVATISAN-DPEVGKLIADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVT 204 (543)
T ss_dssp HHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCS
T ss_pred HHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHHHHHHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCcccccccc
Confidence 999999999999888999999999998 8999999999999999999999999999988889999999999999999999
Q ss_pred ccccceeeecCceEEEeccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhhhhhHHhhhcCCCccEEEEEecccchhhh
Q 011729 160 HKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRK 239 (478)
Q Consensus 160 ~~~~~~~~l~~~~Ili~d~~i~~~~~i~~~le~i~~~~~~lvIi~~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk 239 (478)
++++|+.+++||+|+++|.+|+++++++++++++.++|+||||++++|+++++++|+.|+++|.++|+|||.|+||+.|+
T Consensus 205 ~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~ 284 (543)
T 1we3_A 205 NPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRK 284 (543)
T ss_dssp BTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHH
T ss_pred CcccCceeecCceEEEECCCcCCHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhcch----HHHH
Q 011729 240 AIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLK 315 (478)
Q Consensus 240 ~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~g~~~~~~i~~~~~~l~~~i~~~~s----~~l~ 315 (478)
++|+|||++|||++++++.+++++++++++||+|+.|+++++++++|+||+++++++.|+++++.+++.++| ++|+
T Consensus 285 ~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~ 364 (543)
T 1we3_A 285 EMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQ 364 (543)
T ss_dssp HHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHH
T ss_pred HHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHH
Confidence 999999999999999998899999999999999999999999999999999999999999999999998888 9999
Q ss_pred HHHhhhcCCeEEEEeccCchhHHHHHHHHHHHHHHHHHHHHHcCCcCCchHHHHHHHHHHHhhcCC-ChhhHHHHHHHHH
Q 011729 316 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQN 394 (478)
Q Consensus 316 ~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~DAl~a~r~a~~~gvVpGGGa~e~~~s~~L~~~~~~-~~~~~~gi~~~a~ 394 (478)
|||+||+|++|||+|||+|+++++|+||+++||||++|+++++|+|||||++|++++..|++++.+ ++++|+|+++|++
T Consensus 365 erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ 444 (543)
T 1we3_A 365 ERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDEATGAKIVRR 444 (543)
T ss_dssp HHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCccHHHHHHHHHHHHHhhccCchHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999875 8999999999999
Q ss_pred HHHHHHHHHHHhcCCChHHH-HHHHhc-CCCCeeEeCCCCCcccccccCCCCCcccccccCCccccccHHHHHHHHHHHH
Q 011729 395 ALKMAAYLIASNAGVDGSVI-DKLLEQ-DSSDLGYNPARGRWECFHFFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMI 472 (478)
Q Consensus 395 AL~~~~~~La~NaG~d~~~v-~~l~~~-~~~~~G~d~~~~~~~~~~~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A 472 (478)
||+.||++||+|||+|+.++ .+|++. ++.++|||+.+| +++||++.|||||+.||+++|++|+++|
T Consensus 445 ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~G~d~~~g------------~~~dm~~~gI~dp~~vk~~al~~A~e~a 512 (543)
T 1we3_A 445 ALEEPARQIAENAGYEGSVIVQQILAETKNPRYGFNAATG------------EFVDMVEAGIVDPAKVTRSALQNAASIG 512 (543)
T ss_dssp HTTHHHHHHHHHHTSCHHHHHHHHHHCCSCTTEEEETTTT------------EEEETTTTTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHhcCCCCEEEeCCCC------------eecccccCCcCccHHHHHHHHHHHHHHH
Confidence 99999999999999999999 999874 356899999999 9999999999999999999999999999
Q ss_pred HHHhcC
Q 011729 473 SLKNAI 478 (478)
Q Consensus 473 ~~iL~i 478 (478)
++||+|
T Consensus 513 ~~iL~i 518 (543)
T 1we3_A 513 ALILTT 518 (543)
T ss_dssp HHHHTE
T ss_pred HHHHHH
Confidence 999986
No 4
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=3.1e-102 Score=835.02 Aligned_cols=456 Identities=36% Similarity=0.535 Sum_probs=399.1
Q ss_pred HHHHhhhccccCc----ccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINT----TGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADA 79 (478)
Q Consensus 5 ~~~il~~~~~~~p----~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~-G~~P~~I~~G~~~A~~~ 79 (478)
..||||+|++.|| .+|++ +++|++||+++||||||+||||++||+++.+++. |+||+.|++||++|++.
T Consensus 53 G~tIlk~i~~~hp~en~~Akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~ 126 (545)
T 1iok_A 53 GVSVAKEIELSDKFENMGAQMV------REVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAK 126 (545)
T ss_dssp HHHHHHHCCCSSHHHHHHHHHH------HHHHHHGGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCChhhHHHHHHH------HHHHHhhccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 4699999999999 88888 4888899999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhccCCceeEecCCCccceeEEEeeEEEeccccCCcccc
Q 011729 80 VVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFT 159 (478)
Q Consensus 80 ~~~~L~~~s~~v~~~~~l~~vA~ts~~~~~~la~li~~a~~~vg~~~~I~v~~g~~~~d~~~lv~G~~~~~g~~~~~~~~ 159 (478)
++++|+++++|+++.++|.++|++|+++++.|++++++|+.+++++|.|+|++|++++|++++++|++|++||.+|||++
T Consensus 127 a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt 206 (545)
T 1iok_A 127 VVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVT 206 (545)
T ss_dssp HHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHHHHHHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCC
T ss_pred HHHHHHHhcccCCCHHHHHHHHHhhcCCchhHHHHHHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCcccccccc
Confidence 99999999999988889999999999889999999999999999999999999999988779999999999999999999
Q ss_pred ccccceeeecCceEEEeccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhhhhhHHhhhcCCCccEEEEEecccchhhh
Q 011729 160 HKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRK 239 (478)
Q Consensus 160 ~~~~~~~~l~~~~Ili~d~~i~~~~~i~~~le~i~~~~~~lvIi~~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk 239 (478)
+|++|+.+++||+|+++|++|+++++++++++++.++|+||||++++|+++++++|+.|+++|.++|+|||.|+||+.|+
T Consensus 207 ~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~ 286 (545)
T 1iok_A 207 NADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRK 286 (545)
T ss_dssp CSSSSCEEEEEEEEEECSSCBCCCCC-----------CCCCEEEESCBC-----------------CEEEECSCCTTHHH
T ss_pred CcccCceeecCCeEEEEcCCcCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhcch----HHHH
Q 011729 240 AIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLK 315 (478)
Q Consensus 240 ~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~g~~~~~~i~~~~~~l~~~i~~~~s----~~l~ 315 (478)
++|+|||++|||++++++.+++++++++++||+|++|++++++|++|+||+++++++.|+++++.+++..+| ++|+
T Consensus 287 ~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~ 366 (545)
T 1iok_A 287 AMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQ 366 (545)
T ss_dssp HHHHHHHHHHTC---------------CTTSEEEEEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHH
T ss_pred HHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHH
Confidence 999999999999999998889999999999999999999999999999999999999999999999998887 9999
Q ss_pred HHHhhhcCCeEEEEeccCchhHHHHHHHHHHHHHHHHHHHHHcCCcCCchHHHHHHHHHHHhhcCCChhhHHHHHHHHHH
Q 011729 316 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNA 395 (478)
Q Consensus 316 ~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~DAl~a~r~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~~~~gi~~~a~A 395 (478)
|||+||+|++|||+|||+|+++++|+||+++||||++|+++++|+|||||++|++++.+|++++..++++|+|+++|++|
T Consensus 367 erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~A 446 (545)
T 1iok_A 367 ERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRA 446 (545)
T ss_dssp HHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHGGGGGSCCCSSHHHHHHHHHHHHH
T ss_pred HHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHhccCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998865688999999999999
Q ss_pred HHHHHHHHHHhcCCChHHH-HHHHhcCCCCeeEeCCCCCcccccccCCCCCcccccccCCccccccHHHHHHHHHHHHHH
Q 011729 396 LKMAAYLIASNAGVDGSVI-DKLLEQDSSDLGYNPARGRWECFHFFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMISL 474 (478)
Q Consensus 396 L~~~~~~La~NaG~d~~~v-~~l~~~~~~~~G~d~~~~~~~~~~~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A~~ 474 (478)
|+.||++||+|||+|+.++ ++|++.+++++|||+.+| +++||++.|||||+.||+++|++|+++|++
T Consensus 447 Le~ip~~La~NaG~d~~~vv~~l~~~~~~~~G~d~~~g------------~~~dm~~~gI~dp~~vk~~al~~A~~~A~~ 514 (545)
T 1iok_A 447 LEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTE------------EYGDMFKFGVIDPAKVVRTALEDAASVAGL 514 (545)
T ss_dssp TTHHHHHHHHHHTSCHHHHHHHHHSCCSTTEEEETTTT------------EEEEHHHHTCEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHhhcCCCeeEeCCCC------------cccchHhcCcEEccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 999876457899999999 999999999999999999999999999999
Q ss_pred HhcC
Q 011729 475 KNAI 478 (478)
Q Consensus 475 iL~i 478 (478)
||+|
T Consensus 515 iL~i 518 (545)
T 1iok_A 515 LITT 518 (545)
T ss_dssp HHTE
T ss_pred HHhH
Confidence 9986
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=3.2e-87 Score=723.35 Aligned_cols=431 Identities=13% Similarity=0.145 Sum_probs=358.3
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhh-cC-CCChHHHHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKA-LG-RANLTGLTQGFRMAADAVVR 82 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~l-i~-G~~P~~I~~G~~~A~~~~~~ 82 (478)
..||||+|++.||+||++ + ++|++||+++||||||+||||++||++|.++ +. |+||+.|++||++|++.+++
T Consensus 61 G~TIlk~i~~~hP~Akll--~----e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~ 134 (590)
T 3p9d_C 61 GHAILREIDVAHPAAKSM--L----ELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALE 134 (590)
T ss_dssp HHHHHHHSCCCCHHHHTH--H----HHTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCHHHHHH--H----HHHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4 7788999999999999999999999999999 99 99999999999999999999
Q ss_pred HHhccccccCC--HHHHHHHHHHhcC------CChhHHHHHHHHHHhhccCCc----------------eeEe--cCCCc
Q 011729 83 NLDCQARKITT--FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWENDL----------------ITIF--DRKAL 136 (478)
Q Consensus 83 ~L~~~s~~v~~--~~~l~~vA~ts~~------~~~~la~li~~a~~~vg~~~~----------------I~v~--~g~~~ 136 (478)
+|+++++|++. .+.|.++|+||++ +++.|++++++|+.++++++. |+|+ .|++.
T Consensus 135 ~L~~~s~~v~~~~~e~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~ 214 (590)
T 3p9d_C 135 VIKQVSKPVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDV 214 (590)
T ss_dssp HHHHHCCTTTTCCTHHHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCG
T ss_pred HHHHHhhccccCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCc
Confidence 99999999873 6789999988754 367899999999999987642 4444 47777
Q ss_pred cceeEEEeeEEEeccccCCccccccccceeeecCceEEEeccc-------------cCCHHHHHHHH-----------HH
Q 011729 137 YNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVIRQAS-----------LP 192 (478)
Q Consensus 137 ~d~~~lv~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~-------------i~~~~~i~~~l-----------e~ 192 (478)
. ++++++||+|++++.+|.| +.+++||+|+++|++ |++++++.+++ ++
T Consensus 215 ~-ds~lv~Gmvfdk~~~~~~m-------~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vek 286 (590)
T 3p9d_C 215 L-DSRVLKGVLLNKDVVHPKM-------SRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQ 286 (590)
T ss_dssp G-GCBCCSSEEECCCCSCTTS-------CSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred c-cceeeeEEEEecccCCCCC-------cceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5 5899999999999887755 457999999999984 34555655554 67
Q ss_pred HHhcCCCEEEEecCcchhhhhhHHhhhcCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCcee
Q 011729 193 CMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS 272 (478)
Q Consensus 193 i~~~~~~lvIi~~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~ 272 (478)
+.+.|.+|+|+.++|+++++++|..|+ |+++++. |+++|+|||++|||+++++ ++++++++||+
T Consensus 287 I~~~g~~vII~e~~I~d~Al~~L~k~~------I~av~~~-----~k~~le~ia~~TGa~iis~-----l~~~~~~~LG~ 350 (590)
T 3p9d_C 287 ILAVRPTLVITEKGVSDLAQHYLLKGG------CSVLRRV-----KKSDNNRIARVTGATIVNR-----VEDLKESDVGT 350 (590)
T ss_dssp HHTTCCSEECCSSCCCTHHHHHHHHTT------CCCCCCC-----CHHHHHHHHHHHTCCCCSC-----STTCCTTSCBC
T ss_pred HHhcCCcEEEecCCcCHHHHHHHHhcc------ceeeccC-----CHHHHHHHHHHhCCceeec-----ccCCCHHHhCC
Confidence 888987677767789999999999765 4555544 7888999999999999986 89999999999
Q ss_pred -eeEEE---EecceEEEEcCCCChhh--------------------------HHHHHHHHHHHhhhcchHHHHHHHhhhc
Q 011729 273 -CKRVI---ATMDNVVIIGGSGELVD--------------------------IQERCEQLRSTIKLSTSDKLKDRLAKLS 322 (478)
Q Consensus 273 -~~~v~---i~~~~~~~~~g~~~~~~--------------------------i~~~~~~l~~~i~~~~s~~l~~Rl~~l~ 322 (478)
|++|+ +++++|++|+||++++. |+.|+++++++++..+| .+.+|+++|+
T Consensus 351 ~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~-~~~~~~~~l~ 429 (590)
T 3p9d_C 351 NCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSG-HHHHHHHHGS 429 (590)
T ss_dssp CCSEEECCEETTEECEEECC----------------------------------------------------------CC
T ss_pred cCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCC-HHHHHHHhhc
Confidence 99996 68899999999999888 99999999999988777 3346689999
Q ss_pred CCeEEEEeccCchhHHHHHHHHHHHHHHHHHHHHHc-CCcCCchHHHHHHHHHHHhhcCC-ChhhHHHHHHHHHHHHHHH
Q 011729 323 GGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAA 400 (478)
Q Consensus 323 g~~~tI~v~G~t~~~l~E~~r~l~DAl~a~r~a~~~-gvVpGGGa~e~~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~ 400 (478)
|++|||+|||+|+++++|+||+++||||++|+++++ |+|||||++|++++..|++++.. ++++|+|+++|++||+.||
T Consensus 430 ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip 509 (590)
T 3p9d_C 430 GKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQWPYQAVADAMECIP 509 (590)
T ss_dssp CSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTHHHHHHHHHHTTHHH
T ss_pred CCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998 59999999999999999998654 8999999999999999999
Q ss_pred HHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCCcccccccCCCCCcccccccCCccccccHHHHHHHHHHHHHHHh
Q 011729 401 YLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGRWECFHFFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKN 476 (478)
Q Consensus 401 ~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~~~~~~~~~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A~~iL 476 (478)
++||+|||+|+.++ .+|++. +++++|||+.+| +++||++.|||||+.||+++|++|+++|++||
T Consensus 510 ~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g------------~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL 577 (590)
T 3p9d_C 510 RTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDGDKG------------KIVDMVSYGIWEPEVIKQQSVKTAIESACLLL 577 (590)
T ss_dssp HHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCTTSS------------SCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeCCCC------------eEeehHHcCCeEcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 999873 457899999999 99999999999999999999999999999999
Q ss_pred cC
Q 011729 477 AI 478 (478)
Q Consensus 477 ~i 478 (478)
+|
T Consensus 578 ~i 579 (590)
T 3p9d_C 578 RV 579 (590)
T ss_dssp SE
T ss_pred HH
Confidence 86
No 6
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=3.7e-85 Score=704.32 Aligned_cols=401 Identities=18% Similarity=0.239 Sum_probs=368.3
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|++.||+||++ + ++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 61 G~tIlk~i~v~hP~Akll--~----e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 134 (543)
T 3ruv_A 61 GVTILREMSVEHPAAKML--I----EVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQEL 134 (543)
T ss_dssp HHHHHHHSCCCCHHHHHH--H----HHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCcCHHHHHH--H----HHHHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 4 788899999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC-Cc-----eeEe--cCCCccceeEEEeeEE
Q 011729 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-DL-----ITIF--DRKALYNELNFVKGMK 147 (478)
Q Consensus 84 L~~~s~~v~--~~~~l~~vA~ts~~~------~~~la~li~~a~~~vg~~-~~-----I~v~--~g~~~~d~~~lv~G~~ 147 (478)
|+++++|++ +.+.|.++|+||+++ ++.|++++++|+.+++.+ |. |+|+ .|++. +++++++|++
T Consensus 135 L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~-~ds~lv~G~v 213 (543)
T 3ruv_A 135 LKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASI-DDTELIKGVL 213 (543)
T ss_dssp HHHHCEECCTTCHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCG-GGCEEESSEE
T ss_pred HHHhhCCCCCCCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCc-ccceeecceE
Confidence 999999987 788999999998863 689999999999999987 65 7776 57676 5799999999
Q ss_pred EeccccCCccccccccceeeecCceEEEeccc-------------cCCHHH-----------HHHHHHHHHhcCCCEEEE
Q 011729 148 LEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNV-----------IRQASLPCMMQGQSLLVV 203 (478)
Q Consensus 148 ~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~-------------i~~~~~-----------i~~~le~i~~~~~~lvIi 203 (478)
||++|.||||+ .+++||+|+++|++ |+++++ +.++++++.+.|+||||+
T Consensus 214 ~dk~~~~~~m~-------~~~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~ 286 (543)
T 3ruv_A 214 VDKERVSAQMP-------KKVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFC 286 (543)
T ss_dssp ESCCCSCTTSC-------SEEEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred EeccccCcccc-------ccccCcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 99999999984 47899999999984 566655 667889999999999999
Q ss_pred ecCcchhhhhhHHhhhcCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEe---c
Q 011729 204 AEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---M 280 (478)
Q Consensus 204 ~~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~~~~v~i~---~ 280 (478)
+++|+++++++|.. .+++++++. ++++|+|||++|||+++++ ++++++++||+|++|++. +
T Consensus 287 ~~~I~~~al~~L~~------~gI~~v~~v-----~k~~le~ia~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ig~ 350 (543)
T 3ruv_A 287 QKGIDDLAQHYLAK------EGIVAARRV-----KKSDMEKLAKATGANVIAA-----IAALSAQDLGDAGLVEERKISG 350 (543)
T ss_dssp SSCBCHHHHHHHHH------TTCEEECSC-----CHHHHHHHHHHHCCCEESC-----GGGCCGGGCEEEEEEEEEEETT
T ss_pred eCCccHHHHHHHHH------cCcEEEeeC-----CHHHHHHHHHHhCCceecc-----cccCCHHHCCcccEEEEEEeCC
Confidence 99999999999985 336889977 6788999999999999996 899999999999999864 8
Q ss_pred ceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHHHHHHHHHHHHHcC-
Q 011729 281 DNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG- 359 (478)
Q Consensus 281 ~~~~~~~g~~~~~~i~~~~~~l~~~i~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~DAl~a~r~a~~~g- 359 (478)
++|+||.||++++ .|||+|||+|+++++|+||+++||||++|+++++|
T Consensus 351 ~~~~~i~g~~~~~-------------------------------~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~ 399 (543)
T 3ruv_A 351 DSMIFVEECKHPK-------------------------------AVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGR 399 (543)
T ss_dssp EEEEEEECCSSCS-------------------------------SEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCE
T ss_pred ceEEEEECCCCCc-------------------------------eeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999998764 48999999999999999999999999999999999
Q ss_pred CcCCchHHHHHHHHHHHhhcCC-ChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCeeEeCCCCC
Q 011729 360 IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYNPARGR 433 (478)
Q Consensus 360 vVpGGGa~e~~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~----~~~~~G~d~~~~~ 433 (478)
+|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+|
T Consensus 400 iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g- 478 (543)
T 3ruv_A 400 IVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTG- 478 (543)
T ss_dssp EEETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTC-
T ss_pred eecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCC-
Confidence 9999999999999999998765 899999999999999999999999999999999 999773 346899999999
Q ss_pred cccccccCCCCCcccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 011729 434 WECFHFFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 478 (478)
Q Consensus 434 ~~~~~~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A~~iL~i 478 (478)
++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 479 -----------~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~i 512 (543)
T 3ruv_A 479 -----------AVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRI 512 (543)
T ss_dssp -----------SEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTC
T ss_pred -----------ccccHHHcCCEecHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999999997
No 7
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7.7e-85 Score=697.85 Aligned_cols=404 Identities=14% Similarity=0.154 Sum_probs=365.1
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|++.||++|++ + ++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 53 G~tIlk~i~v~hP~Akll--~----e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 126 (515)
T 3iyg_H 53 GATILKLLDVVHPAAKTL--V----DIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNK 126 (515)
T ss_pred HHHHHHHccCCCHHHHHH--H----HHHHHhhceeCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4 777899999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--C----HHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC---CceeEe--cCCCccceeEEEeeE
Q 011729 84 LDCQARKIT--T----FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---DLITIF--DRKALYNELNFVKGM 146 (478)
Q Consensus 84 L~~~s~~v~--~----~~~l~~vA~ts~~------~~~~la~li~~a~~~vg~~---~~I~v~--~g~~~~d~~~lv~G~ 146 (478)
|+++++|++ + .+.|.++|+||++ +++.|++++++|+.+++.+ +.|+|+ .|++. +++++++||
T Consensus 127 L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~-~ds~lv~G~ 205 (515)
T 3iyg_H 127 IKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGAL-EESQLVAGV 205 (515)
T ss_pred HHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCc-cceEEEeee
Confidence 999999984 5 5667999998764 4678999999999999876 678886 46666 478999999
Q ss_pred EEeccccCCccccccccceeeecCceEEEeccc-------------cCCHHHH-----------HHHHHHHHhcCCCEEE
Q 011729 147 KLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSLLV 202 (478)
Q Consensus 147 ~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~-------------i~~~~~i-----------~~~le~i~~~~~~lvI 202 (478)
+||++|.||||.+.|+ +++||+|+++|++ |++++++ .++++++.+.|+||||
T Consensus 206 ~~dk~~~~p~~~~~p~----~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi 281 (515)
T 3iyg_H 206 AFKKTFSYAGFEMQPK----KYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVL 281 (515)
T ss_pred EEecCccCcccccCCc----cccccEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9999999999976654 7999999999984 6777665 6779999999999999
Q ss_pred EecCcchhhhhhHHhhhcCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEe---
Q 011729 203 VAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT--- 279 (478)
Q Consensus 203 i~~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~~~~v~i~--- 279 (478)
++++|++.++++|.. .+++++++. ++++|+|||++|||+++++ ++++++++||+|+.|++.
T Consensus 282 ~~~~I~dla~~~l~~------~gI~~v~~~-----~k~~leria~~tGa~ii~~-----l~~~~~~~LG~a~~v~~~~ig 345 (515)
T 3iyg_H 282 SKLPIGDVATQYFAD------RDMFCAGRV-----PEEDLKRTMMACGGSIQTS-----VNALSSDVLGRCQVFEETQIG 345 (515)
T ss_pred ECCcccHHHHHHHHH------cCCcccccc-----cHHHHHHHHHHhCCEEeec-----cccCCHHHCCcccEEEEEEEc
Confidence 999999988876653 335677766 6888999999999999996 899999999999999854
Q ss_pred cceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHHHHHHHHHHHHHc-
Q 011729 280 MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE- 358 (478)
Q Consensus 280 ~~~~~~~~g~~~~~~i~~~~~~l~~~i~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~DAl~a~r~a~~~- 358 (478)
++++++|+||+++ +.|||++||+|+++++|+||+++||||++|+++++
T Consensus 346 ~~~~~~i~g~~~~-------------------------------~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~ 394 (515)
T 3iyg_H 346 GERYNFFTGCPKA-------------------------------KTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKND 394 (515)
T ss_pred CeEEEEEecCCCC-------------------------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 7899999998765 35999999999999999999999999999999998
Q ss_pred CCcCCchHHHHHHHHHHHhhcCC-ChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCC
Q 011729 359 GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGR 433 (478)
Q Consensus 359 gvVpGGGa~e~~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~~~ 433 (478)
++|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+|
T Consensus 395 ~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g- 473 (515)
T 3iyg_H 395 SVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTE- 473 (515)
T ss_pred CeecCCcHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCC-
Confidence 59999999999999999998765 899999999999999999999999999999999 999874 346789999999
Q ss_pred cccccccCCCCCcccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 011729 434 WECFHFFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 478 (478)
Q Consensus 434 ~~~~~~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A~~iL~i 478 (478)
++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 474 -----------~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~i 507 (515)
T 3iyg_H 474 -----------DIADNFEAFVWEPAMVRINALTAASEAACLIVSV 507 (515)
T ss_pred -----------cccccHhccCEECHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999986
No 8
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=3.8e-85 Score=704.73 Aligned_cols=401 Identities=19% Similarity=0.266 Sum_probs=368.6
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|++.||+||++ + ++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 72 G~tIlk~i~v~hP~Akll--~----e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 145 (553)
T 3ko1_A 72 GATILDKMDLQHPAAKLL--V----QIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQT 145 (553)
T ss_dssp HHHHHHSSCCCSHHHHHH--H----HHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhhhccChhHHHH--H----HHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHH
Confidence 469999999999999999 4 777899999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC--Cc-------eeEe--cCCCccceeEEEe
Q 011729 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN--DL-------ITIF--DRKALYNELNFVK 144 (478)
Q Consensus 84 L~~~s~~v~--~~~~l~~vA~ts~~~------~~~la~li~~a~~~vg~~--~~-------I~v~--~g~~~~d~~~lv~ 144 (478)
|++++++++ +.+.|.++|+||+++ ++.|++++++|+.+++.+ |. |+|+ .|++. +++++++
T Consensus 146 L~~~s~~v~~~d~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~-~ds~lv~ 224 (553)
T 3ko1_A 146 IQELAQTVSINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSI-NDTQLVY 224 (553)
T ss_dssp HHTTCEECCTTCHHHHHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCG-GGCEEES
T ss_pred HHHhcCCCCCCcHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCcc-ccceeeE
Confidence 999999987 788999999999875 678999999999999875 65 7876 56666 5799999
Q ss_pred eEEEeccccCCccccccccceeeecCceEEEecc-------------ccCCHHH-----------HHHHHHHHHhcCCCE
Q 011729 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT-------------KISNSNV-----------IRQASLPCMMQGQSL 200 (478)
Q Consensus 145 G~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~-------------~i~~~~~-----------i~~~le~i~~~~~~l 200 (478)
||+|+++|.||||+ .+++||+|+++|+ +|+++++ +.++++++.+.|+||
T Consensus 225 G~v~dk~~~~~~m~-------~~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~v 297 (553)
T 3ko1_A 225 GIVVDKEVVHPGMP-------KRLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANV 297 (553)
T ss_dssp EEEECSCBSCTTSC-------SCCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSE
T ss_pred EEEecccccCCCCc-------cccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceE
Confidence 99999999999984 3689999999998 4667766 567789999999999
Q ss_pred EEEecCcchhhhhhHHhhhcCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEe-
Q 011729 201 LVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT- 279 (478)
Q Consensus 201 vIi~~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~~~~v~i~- 279 (478)
||++++|+++++++|..+ +++++++. ++++|+|||++|||+++++ ++++++++||+|++|++.
T Consensus 298 vI~~~~I~~~al~~L~~~------gI~~v~~v-----~k~~leria~~tGa~ivs~-----l~~l~~~~LG~a~~v~~~~ 361 (553)
T 3ko1_A 298 IICQKGIDEVAQSYLAKK------GVLAVRRA-----KKSDLEKLARATGGRVVSN-----IDEISEQDLGYASLIEERK 361 (553)
T ss_dssp EECSSCBCSHHHHHHHHH------TCEEECCC-----CHHHHHHHHTTTTCCEESC-----GGGCCSSSSEECSEEECCC
T ss_pred EEeccChHHHHHHHHHhc------chhhhhhh-----hhhhHHHHHHhhCCeeecc-----cccCChhhcchHHHHHHhh
Confidence 999999999999999853 36889977 6778999999999999996 899999999999999864
Q ss_pred --cceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHHHHHHHHHHHHH
Q 011729 280 --MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE 357 (478)
Q Consensus 280 --~~~~~~~~g~~~~~~i~~~~~~l~~~i~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~DAl~a~r~a~~ 357 (478)
+++|+||+||++++ .|||+|||+|+++++|+||+++||||++|++++
T Consensus 362 ig~d~~~~i~g~~~~~-------------------------------~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~ 410 (553)
T 3ko1_A 362 VGEDKMVFVEGAKNPK-------------------------------SISILIRGGLERLVDETERALRDALGTVADVIK 410 (553)
T ss_dssp CSSSCCEEEESCSSSS-------------------------------CEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEEeccCCCCc-------------------------------eEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 89999999998764 489999999999999999999999999999999
Q ss_pred cC-CcCCchHHHHHHHHHHHhhcCC-ChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhcC---C-CCeeEeCC
Q 011729 358 EG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQD---S-SDLGYNPA 430 (478)
Q Consensus 358 ~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~~---~-~~~G~d~~ 430 (478)
+| +|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++.+ + +++|||+.
T Consensus 411 ~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~ 490 (553)
T 3ko1_A 411 DGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLY 490 (553)
T ss_dssp HCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETT
T ss_pred cCceecCCceeEeHHHHHHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEee
Confidence 99 9999999999999999998765 899999999999999999999999999999999 9998742 3 57999999
Q ss_pred CCCcccccccCCCCCcccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 011729 431 RGRWECFHFFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 478 (478)
Q Consensus 431 ~~~~~~~~~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A~~iL~i 478 (478)
+| ++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 491 ~g------------~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 526 (553)
T 3ko1_A 491 AG------------QPVDMWQKGVIEPALVKMNAIKAATEAATLVLRI 526 (553)
T ss_dssp TT------------EEEESGGGSCEEETTHHHHHHHHHHHHHHHHHHE
T ss_pred cC------------CchHHHHhCccchhhhhhhhhhhcchhheEEEeh
Confidence 99 9999999999999999999999999999999986
No 9
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=1.3e-84 Score=696.08 Aligned_cols=400 Identities=17% Similarity=0.192 Sum_probs=365.2
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|++.||+||++ + ++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 54 G~tIlk~i~v~hp~Akll--~----e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 127 (513)
T 3iyg_B 54 GATILKNIGVDNPAAKVL--V----DMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQA 127 (513)
T ss_pred HHHHHHHccccCHHHHHH--H----HHHHHhhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4 778899999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC-----CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC---CceeEe--cCCCccceeEEEeeEE
Q 011729 84 LDCQARKIT-----TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---DLITIF--DRKALYNELNFVKGMK 147 (478)
Q Consensus 84 L~~~s~~v~-----~~~~l~~vA~ts~~------~~~~la~li~~a~~~vg~~---~~I~v~--~g~~~~d~~~lv~G~~ 147 (478)
|+++++|++ +.+.|.++|+||.+ +++.|++++++|+.+++++ +.|+|+ .|++.. ++++++||+
T Consensus 128 L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~-ds~lv~G~v 206 (513)
T 3iyg_B 128 LLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLA-DSYLDEGFL 206 (513)
T ss_pred HHHhCcCcccccccCHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCcc-ceeEEeeEE
Confidence 999999986 46789999987764 4578999999999999987 778886 476664 589999999
Q ss_pred EeccccCCccccccccceeeecCceEEEecc--------------ccCCHHHHH-----------HHHHHHHhcCCCEEE
Q 011729 148 LEWGLKSPYFFTHKNKKECVLDGALVLIYDT--------------KISNSNVIR-----------QASLPCMMQGQSLLV 202 (478)
Q Consensus 148 ~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~--------------~i~~~~~i~-----------~~le~i~~~~~~lvI 202 (478)
|+++|.+| | +.+++||+|+++|+ +|++++++. ++++++.++|+||||
T Consensus 207 ~dk~~~~~-m-------~~~~en~kIll~~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi 278 (513)
T 3iyg_B 207 LDKKIGVN-Q-------PKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFI 278 (513)
T ss_pred EeccccCC-C-------ceeecCceEEEEcCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 99999887 4 35799999999998 466776664 478899999999999
Q ss_pred EecCcchhhhhhHHhhhcCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEE---Ee
Q 011729 203 VAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---AT 279 (478)
Q Consensus 203 i~~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~~~~v~---i~ 279 (478)
++++|+++++++|.. .+|++||+|+ +.+|+|||++|||+++++ ++++++++||+|++|+ ++
T Consensus 279 ~~~~I~~~al~~L~~------~~I~av~~~~-----~~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig 342 (513)
T 3iyg_B 279 NRQLIYNYPEQLFGA------AGVMAIEHAD-----FVGVERLALVTGGEIAST-----FDHPELVKLGSCKLIEEVMIG 342 (513)
T ss_pred EcCCccHHHHHHHHH------cCceEEecCC-----HHHHHHHHHHhCCEEecc-----cccCCHhHCCcccEEEEEEEC
Confidence 999999999999886 4589999996 456999999999999996 8999999999999997 78
Q ss_pred cceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHHHHHHHHHHHHHc-
Q 011729 280 MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE- 358 (478)
Q Consensus 280 ~~~~~~~~g~~~~~~i~~~~~~l~~~i~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~DAl~a~r~a~~~- 358 (478)
++++++|.||+++ ++|||+|||+|+++++|+||+++||||++|+++++
T Consensus 343 ~~~~~~~~g~~~~-------------------------------~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~ 391 (513)
T 3iyg_B 343 EDKLIHFSGVALG-------------------------------EACTIVLRGATQQILDEAERSLHDALCVLAQTVKDS 391 (513)
T ss_pred CeEEEEEecCCCC-------------------------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999998653 57999999999999999999999999999999998
Q ss_pred CCcCCchHHHHHHHHHHHhhcCC-ChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCC
Q 011729 359 GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGR 433 (478)
Q Consensus 359 gvVpGGGa~e~~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~~~ 433 (478)
++|||||++|++++++|++++.+ ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+|
T Consensus 392 ~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g- 470 (513)
T 3iyg_B 392 RTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEG- 470 (513)
T ss_pred cEEeCCcHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCC-
Confidence 69999999999999999999865 899999999999999999999999999999999 999874 456899999999
Q ss_pred cccccccCCCCCcccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 011729 434 WECFHFFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 478 (478)
Q Consensus 434 ~~~~~~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A~~iL~i 478 (478)
++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 471 -----------~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~i 504 (513)
T 3iyg_B 471 -----------TIGDMSVLGITESFQVKRQVLLSAAEAAEVILRV 504 (513)
T ss_pred -----------CccchHhccCEecHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999986
No 10
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=5.1e-85 Score=697.37 Aligned_cols=401 Identities=17% Similarity=0.235 Sum_probs=339.4
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|++.||+||++ + ++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 15 G~tIlk~i~v~hP~Akll--~----e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 88 (500)
T 3aq1_B 15 GATILKEMDIQHPAAKMI--V----EVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRHAAEKCREI 88 (500)
T ss_dssp ----------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCcCCCHHHHHH--H----HHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 368999999999999999 4 778899999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC--Cc--------eeEe--cCCCccceeEEE
Q 011729 84 LDCQARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN--DL--------ITIF--DRKALYNELNFV 143 (478)
Q Consensus 84 L~~~s~~v~--~~~~l~~vA~ts~~------~~~~la~li~~a~~~vg~~--~~--------I~v~--~g~~~~d~~~lv 143 (478)
|+++++|++ +.+.|.++|+||++ +++.|++++++|+.+++.+ |. |+|+ +|++.. +++++
T Consensus 89 L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G~~~~-ds~lv 167 (500)
T 3aq1_B 89 LETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGGSID-DSELI 167 (500)
T ss_dssp HHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEESSCGG-GCEEE
T ss_pred HHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEecCCCcc-ceEEE
Confidence 999999986 47899999997743 4678999999999999865 43 5676 788884 79999
Q ss_pred eeEEEeccccCCccccccccceeeecCceEEEeccc-------------cCCHHHH-----------HHHHHHHHhcCCC
Q 011729 144 KGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQS 199 (478)
Q Consensus 144 ~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~-------------i~~~~~i-----------~~~le~i~~~~~~ 199 (478)
+|++|+++|.||||+ .+++||+|+++|++ |++++++ .++++++.++|+|
T Consensus 168 ~G~v~dk~~~~~~m~-------~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~ 240 (500)
T 3aq1_B 168 DGLVIDKERSHPNMP-------EKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASGAN 240 (500)
T ss_dssp SEEEESCCCSSTTSC-------SEEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHTTCCS
T ss_pred eeeEEeecCCCCCCc-------ccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 999999999999984 37899999999998 6666664 8999999999999
Q ss_pred EEEEecCcchhhhhhHHhhhcCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEe
Q 011729 200 LLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT 279 (478)
Q Consensus 200 lvIi~~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~~~~v~i~ 279 (478)
|||++++|+++++++|..|+ |++|++. |+++|+|||++|||+++++ ++++++++||+|++|++.
T Consensus 241 lvi~~~~I~~~al~~L~~~~------I~av~~~-----~k~~le~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~ 304 (500)
T 3aq1_B 241 VVFCQKGIDDMAQYYIEKAG------IYAVRRV-----KKSDLKRLSKVTGATIIQD-----LDQITTEDVGTAGLVEEK 304 (500)
T ss_dssp EEEESSCBCHHHHHHHHHTT------CEEECSC-----CHHHHHHHHHHHCCCCBSC-----TTCCCSTTCEEEEEEEEE
T ss_pred EEEECCCcCHHHHHHHHHCC------EEEEEeC-----CHHHHHHHHHHhCCeEecc-----cccCCHhHCCCceEEEEE
Confidence 99999999999999999865 7899866 7888999999999999986 899999999999999865
Q ss_pred ---cceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHHHHHHHHHHHH
Q 011729 280 ---MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAK 356 (478)
Q Consensus 280 ---~~~~~~~~g~~~~~~i~~~~~~l~~~i~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~DAl~a~r~a~ 356 (478)
+++|++|+||+++ +.|||+|||+|+++++|+||+++||||++|+++
T Consensus 305 ~ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~ 353 (500)
T 3aq1_B 305 EVRGGKMTYVTGCQNS-------------------------------KAVTVLLHGGTEHVVDSLDHALNDALHVVGVVI 353 (500)
T ss_dssp ECSSSEEEEEEEETTC-------------------------------CCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCeEEEEEECCCCC-------------------------------ceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999998654 579999999999999999999999999999999
Q ss_pred HcC-CcCCchHHHHHHHHHHHhhcCC-ChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCC
Q 011729 357 EEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPA 430 (478)
Q Consensus 357 ~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~ 430 (478)
++| +|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +..++|||+.
T Consensus 354 ~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~ 433 (500)
T 3aq1_B 354 EDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEALEVIPVALAENAGLDPIDIMVELRSQHEKGNKNAGLNVY 433 (500)
T ss_dssp HHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTEEECTT
T ss_pred HCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeeEeCC
Confidence 999 9999999999999999999764 899999999999999999999999999999999 999863 3458999999
Q ss_pred CCCcccccccCCCCCcccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 011729 431 RGRWECFHFFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 478 (478)
Q Consensus 431 ~~~~~~~~~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A~~iL~i 478 (478)
+| ++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 434 ~g------------~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 469 (500)
T 3aq1_B 434 TG------------EVVDMWENDVIEPLRIKTQAINAAMEATVMILRI 469 (500)
T ss_dssp TC------------CEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC
T ss_pred CC------------CccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99 9999999999999999999999999999999987
No 11
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=2.3e-85 Score=707.66 Aligned_cols=406 Identities=17% Similarity=0.252 Sum_probs=369.3
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|++.||+||++ + ++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 66 G~tIlk~i~v~hP~Akll--~----e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 139 (559)
T 3p9d_A 66 GATILSLLDVQHPAGKIL--V----ELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRF 139 (559)
T ss_dssp HHHHHHHHCCCSHHHHHH--H----HHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHH--H----HHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 4 777899999999999999999999999999999 999999999999999999999
Q ss_pred Hhc-cccccCC--HHHHHHHHHHhcCC------ChhHHHHHHHHHHhhcc-----CCc-----eeEe--cCCCccceeEE
Q 011729 84 LDC-QARKITT--FEEIAQVGTTAANG------DGEIGELIAKVFEKGWE-----NDL-----ITIF--DRKALYNELNF 142 (478)
Q Consensus 84 L~~-~s~~v~~--~~~l~~vA~ts~~~------~~~la~li~~a~~~vg~-----~~~-----I~v~--~g~~~~d~~~l 142 (478)
|++ +++|++. .+.|.++|+||+++ ++.|++++++|+.++++ ++. |+|+ .|++.. ++++
T Consensus 140 L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~-ds~l 218 (559)
T 3p9d_A 140 INEVLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSAT-ESLL 218 (559)
T ss_dssp HHHHTGGGSCC--CTTHHHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSS-CCBC
T ss_pred HHHhcccCCCCCCHHHHHHHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCcc-ceeE
Confidence 999 9999874 67899999999875 68899999999999984 244 4554 388886 5899
Q ss_pred EeeEEEeccccCCccccccccceeeec--CceEEEecccc-------------CCHHH-----------HHHHHHHHHhc
Q 011729 143 VKGMKLEWGLKSPYFFTHKNKKECVLD--GALVLIYDTKI-------------SNSNV-----------IRQASLPCMMQ 196 (478)
Q Consensus 143 v~G~~~~~g~~~~~~~~~~~~~~~~l~--~~~Ili~d~~i-------------~~~~~-----------i~~~le~i~~~ 196 (478)
++||+|+++|.||||++ .++ ||+|+++|++| +++++ +.++++++.++
T Consensus 219 v~G~v~dk~~~~~~m~~-------~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~ 291 (559)
T 3p9d_A 219 VPGYALNCTVASQAMPK-------RIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDA 291 (559)
T ss_dssp CSEECCCCCCSSTTSCS-------EECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eccEEEeecccCCCcce-------eeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999863 677 99999999876 34333 68999999999
Q ss_pred CCCEEEEecCcchhhhhhHHhhhcCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCc-CCCCCCCceeeeE
Q 011729 197 GQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNS-TYFVPLKLGSCKR 275 (478)
Q Consensus 197 ~~~lvIi~~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~-~~~~~~~LG~~~~ 275 (478)
|+||||++++|+++++++|..|+ +++++++ |+++|+|||++|||+++++..++.+ +++++++||+|++
T Consensus 292 g~~lvI~~~~I~~~al~~L~~~~------I~av~~~-----~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~ 360 (559)
T 3p9d_A 292 GAQVVLTTKGIDDLCLKEFVEAK------IMGVRRC-----KKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDE 360 (559)
T ss_dssp CCSEEEESSCCCGGGTHHHHHTT------CEEESSC-----CHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEE
T ss_pred CCCEEEEcCCCCHHHHHHHHHcC------CceEccC-----CHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceE
Confidence 99999999999999999999876 5888876 6888999999999999998666554 8899999999999
Q ss_pred EE---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHHHHHHHH
Q 011729 276 VI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAV 352 (478)
Q Consensus 276 v~---i~~~~~~~~~g~~~~~~i~~~~~~l~~~i~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~DAl~a~ 352 (478)
|+ +++++|++|.||+++ ++|||+|||+|+++++|+||+++||||++
T Consensus 361 v~~~~ig~~~~~~~~g~~~~-------------------------------~~~tI~lrG~te~~l~E~kr~l~DAL~~~ 409 (559)
T 3p9d_A 361 VVQAKFSDDECILIKGTSKH-------------------------------SSSSIILRGANDYSLDEMERSLHDSLSVV 409 (559)
T ss_dssp EEEEECSSCEEECEEEESSS-------------------------------CCCCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCceEEEEEcCCCC-------------------------------CEEEEEEcCCCHHHHHHHHHHHHHHHHHH
Confidence 98 689999999998654 57999999999999999999999999999
Q ss_pred HHHHHcC-CcCCchHHHHHHHHHHHhhcCC-ChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCC---
Q 011729 353 QAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSS--- 423 (478)
Q Consensus 353 r~a~~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~--- 423 (478)
|+++++| +|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.
T Consensus 410 r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~ 489 (559)
T 3p9d_A 410 KRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKP 489 (559)
T ss_dssp HHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC-
T ss_pred HHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccc
Confidence 9999999 9999999999999999999875 899999999999999999999999999999999 999773 233
Q ss_pred ---------CeeEeCCCCCcccccccCCCCCcccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 011729 424 ---------DLGYNPARGRWECFHFFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 478 (478)
Q Consensus 424 ---------~~G~d~~~~~~~~~~~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A~~iL~i 478 (478)
++|||+.+| +++||++.|||||+.||+++|++|+++|++||+|
T Consensus 490 ~~~~~~~~~~~G~d~~~g------------~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 541 (559)
T 3p9d_A 490 EDVKRRSYRNYGLDLIRG------------KIVDEIHAGVLEPTISKVKSLKSALEACVAILRI 541 (559)
T ss_dssp ---CCCCCCCEEECTTSS------------SEEESTTSSCCEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred cccccccccceeEECCCC------------cEeehhhccCEecHHHHHHHHHHHHHHHHHHHhH
Confidence 789999999 9999999999999999999999999999999986
No 12
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7.5e-84 Score=692.64 Aligned_cols=406 Identities=16% Similarity=0.184 Sum_probs=365.5
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|++.||+||++ + ++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 52 G~tIlk~i~v~hP~akll--~----~~a~~qd~e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 125 (529)
T 3iyg_A 52 GATILKLLEVEHPAAKVL--C----ELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRY 125 (529)
T ss_pred HHHHHHHcccCChHHHHH--H----HHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4 777899999999999999999999999999999 999999999999999999999
Q ss_pred Hhc-cccccC--CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhc---cCC-----c--eeEe--cCCCccceeEE
Q 011729 84 LDC-QARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGW---END-----L--ITIF--DRKALYNELNF 142 (478)
Q Consensus 84 L~~-~s~~v~--~~~~l~~vA~ts~~------~~~~la~li~~a~~~vg---~~~-----~--I~v~--~g~~~~d~~~l 142 (478)
|++ ++++++ +.+.|.++|+||++ +++.|++++++|+.+++ .+| . |+|+ .|+++. ++++
T Consensus 126 L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~-ds~l 204 (529)
T 3iyg_A 126 ISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQM-ESML 204 (529)
T ss_pred HHHhcccCCCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCcc-ceEE
Confidence 999 999887 67899999999875 36789999999999997 334 2 6664 577764 5899
Q ss_pred EeeEEEeccccCCccccccccceeeecCceEEEecccc-------------CCHHH-----------HHHHHHHHHhcCC
Q 011729 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKI-------------SNSNV-----------IRQASLPCMMQGQ 198 (478)
Q Consensus 143 v~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~i-------------~~~~~-----------i~~~le~i~~~~~ 198 (478)
++|++|+++|.+|+|++ .++||+|+++|+++ +++++ +.++++++.+.|+
T Consensus 205 v~G~v~dk~~~~~~m~~-------~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~ 277 (529)
T 3iyg_A 205 INGYALNCVVGSQGMPK-------RIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGA 277 (529)
T ss_pred EeeeEEecCcccccCCc-------ccCCceEEEecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999864 68899999999864 33322 5688899999999
Q ss_pred CEEEEecCcchhhhhhHHhhhcCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCC-cCCCCCCCceeeeEEE
Q 011729 199 SLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMN-STYFVPLKLGSCKRVI 277 (478)
Q Consensus 199 ~lvIi~~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~-~~~~~~~~LG~~~~v~ 277 (478)
||||++++|++.++++|..|+ |++||+. ++++|+|||++|||+++++..++. .+++++++||+|+.|+
T Consensus 278 nvvi~~~~I~d~al~~L~~~g------I~av~~v-----~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~ 346 (529)
T 3iyg_A 278 NVILTTGGIDDMCLKYFVEAG------AMAVRRV-----LKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVV 346 (529)
T ss_pred CEEEECCCCCHHHHHHHHHcC------CceeccC-----CHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEE
Confidence 999999999999999999865 7899977 678899999999999999854443 2456688999999997
Q ss_pred ---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHHHHHHHHHH
Q 011729 278 ---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQA 354 (478)
Q Consensus 278 ---i~~~~~~~~~g~~~~~~i~~~~~~l~~~i~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~DAl~a~r~ 354 (478)
++++++++|.||+++ +.|||+|||+|+++++|.||+++||||++|+
T Consensus 347 ~~~ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~ 395 (529)
T 3iyg_A 347 QERICDDELILIKNTKAR-------------------------------TSASVILRGANDFMCDEMERSLHDALCVVKR 395 (529)
T ss_pred EEEeCCceEEEEEcCCCC-------------------------------ceEEEEECCchHHHHHHHHHHHHHHHHHHHH
Confidence 789999999998765 4699999999999999999999999999999
Q ss_pred HHHcC-CcCCchHHHHHHHHHHHhhcCC-ChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CC------
Q 011729 355 AKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DS------ 422 (478)
Q Consensus 355 a~~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~------ 422 (478)
++++| +|||||++|+++|.+|++++.+ ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +.
T Consensus 396 ~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~ 475 (529)
T 3iyg_A 396 VLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERK 475 (529)
T ss_pred HhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccc
Confidence 99999 9999999999999999999875 899999999999999999999999999999999 999873 22
Q ss_pred --CCeeEeCCCCCcccccccCCCCCcccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 011729 423 --SDLGYNPARGRWECFHFFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 478 (478)
Q Consensus 423 --~~~G~d~~~~~~~~~~~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A~~iL~i 478 (478)
.++|||+.+| ++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 476 ~~~~~G~d~~~g------------~~~d~~~~gV~dp~~vk~~al~~A~e~a~~iL~i 521 (529)
T 3iyg_A 476 NLKWIGLDLVNG------------KPRDNKQAGVFEPTIVKVKSLKFATEAAITILRI 521 (529)
T ss_pred cCceeeeeCCCC------------CccChhhccCEecHHHHHHHHHHHHHHHHHHHhH
Confidence 5799999999 9999999999999999999999999999999987
No 13
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=5.7e-85 Score=700.78 Aligned_cols=405 Identities=15% Similarity=0.142 Sum_probs=367.0
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|++.||++|++ + ++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 61 G~tIlk~i~v~hP~akll--~----e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 134 (528)
T 3p9d_D 61 GHTILKQMAILHPVARML--V----EVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDI 134 (528)
T ss_dssp HHHHHHHSCCCCTTHHHH--H----HHHHHHHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccCCHHHHHH--H----HHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 4 777899999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhcc--CCceeEe-------cCCCccceeEEEeeE
Q 011729 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWE--NDLITIF-------DRKALYNELNFVKGM 146 (478)
Q Consensus 84 L~~~s~~v~--~~~~l~~vA~ts~~~------~~~la~li~~a~~~vg~--~~~I~v~-------~g~~~~d~~~lv~G~ 146 (478)
|++++.|++ +.+.|.++|+||+++ ++.|++++++|+.++++ ++.|+++ .|+++. ++++++||
T Consensus 135 L~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~-ds~lv~G~ 213 (528)
T 3p9d_D 135 LLEMCHKVSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTID-DTEMIDGV 213 (528)
T ss_dssp HHTTCCCCCSCCHHHHHHHHHHHSCSSSCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSC-CCEEESSC
T ss_pred HHHhhCCCCCCCHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCcc-ceEEEeee
Confidence 999999987 788999999999974 57899999999999987 4554443 388875 58999999
Q ss_pred EEeccccCCccccccccceeeecCceEEEeccccC-------------CHH-----------HHHHHHHHHHhcCCCEEE
Q 011729 147 KLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSN-----------VIRQASLPCMMQGQSLLV 202 (478)
Q Consensus 147 ~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~i~-------------~~~-----------~i~~~le~i~~~~~~lvI 202 (478)
+|+++|.|||| |+..++||+|+++|++|+ +++ .+.++++++.+.|+||||
T Consensus 214 v~dk~~~~~~~------m~~~ien~kIll~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi 287 (528)
T 3p9d_D 214 VLTQTAIKSAG------GPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLL 287 (528)
T ss_dssp BCCCCCCCSSS------CCSEESSEEEEEECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEeecccCccc------CcccccCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999994 345899999999999765 443 378999999999999999
Q ss_pred EecCc-----chhhhhhHHhhhcCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEE
Q 011729 203 VAEDV-----ENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI 277 (478)
Q Consensus 203 i~~~i-----~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~~~~v~ 277 (478)
++++| ++.++++|..|+ |++||++ ++++|+|||++|||+++++ ++++++++||+|+.|+
T Consensus 288 ~~~~I~~~a~~~~al~~L~~~~------I~av~~~-----~k~~le~ia~~tGa~ii~~-----~~~l~~~~LG~a~~v~ 351 (528)
T 3p9d_D 288 IQKSILRDAVNDLALHFLSKLN------IMVVKDI-----EREEIEFLSKGLGCKPIAD-----IELFTEDRLDSADLVE 351 (528)
T ss_dssp ESSCSCTTSCSCHHHHHHTTTS------CCEEECC-----CTHHHHHHHHHHTCCCCSC-----STTCCSSSEEEESCEE
T ss_pred EeCCcccccCCHHHHHHHHHcC------cEEEEeC-----CHHHHHHHHHHHCCEEecc-----cccCCHHHCCcccEEE
Confidence 99999 999999888654 7899988 5778999999999999997 7899999999999997
Q ss_pred ---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHHHHHHHHHH
Q 011729 278 ---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQA 354 (478)
Q Consensus 278 ---i~~~~~~~~~g~~~~~~i~~~~~~l~~~i~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~DAl~a~r~ 354 (478)
++++++++|.+|.+.. .+++|||+|||+|+++++|+||+++||||++|+
T Consensus 352 ~~~ig~~~~~~i~g~~~~~----------------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~ 403 (528)
T 3p9d_D 352 EIDSDGSKIVRVTGIRNNN----------------------------ARPTVSVVIRGANNMIIDETERSLHDALCVIRC 403 (528)
T ss_dssp CCEETTEECCBCTTBCCGG----------------------------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHH
T ss_pred EEEECCEEEEEEEcccccC----------------------------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4577889999875211 147899999999999999999999999999999
Q ss_pred HHHcC-CcCCchHHHHHHHHHHHhhcCC-ChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEe
Q 011729 355 AKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYN 428 (478)
Q Consensus 355 a~~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~~~G~d 428 (478)
++++| +|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||
T Consensus 404 av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d 483 (528)
T 3p9d_D 404 LVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGIS 483 (528)
T ss_dssp HHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCC
T ss_pred HHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCcccee
Confidence 99999 9999999999999999999865 899999999999999999999999999999999 999874 35679999
Q ss_pred CCCCCcccccccCCCCCcccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 011729 429 PARGRWECFHFFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 478 (478)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A~~iL~i 478 (478)
+.+| ++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 484 ~~~g------------~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 521 (528)
T 3p9d_D 484 VRRS------------GTTNTYEEHILQPVLVSTSAITLASECVKSILRI 521 (528)
T ss_dssp SSSS------------SCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCCC------------CccchHhccCeecHHHHHHHHHHHHHHHHHHHhh
Confidence 9999 9999999999999999999999999999999987
No 14
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=4.4e-84 Score=696.71 Aligned_cols=401 Identities=17% Similarity=0.262 Sum_probs=370.4
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|++.||+||++ + ++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 65 G~tIlk~i~v~hP~Akll--~----e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 138 (548)
T 1q3q_A 65 CATILDKIDLQHPAAKMM--V----EVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEI 138 (548)
T ss_dssp HHHHHHHSCCCSHHHHHH--H----HHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccchHHHHH--H----HHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4 777899999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC--C-------ceeEe--cCCCccceeEEEe
Q 011729 84 LDCQARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN--D-------LITIF--DRKALYNELNFVK 144 (478)
Q Consensus 84 L~~~s~~v~--~~~~l~~vA~ts~~------~~~~la~li~~a~~~vg~~--~-------~I~v~--~g~~~~d~~~lv~ 144 (478)
|+++++|++ +.++|.++|+||++ +++.|++++++|+.+++++ | .|+|+ +|++.. ++++++
T Consensus 139 L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~-ds~lv~ 217 (548)
T 1q3q_A 139 LDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVE-ESELVR 217 (548)
T ss_dssp HHHHCEECCTTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGG-GCEEES
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCcc-ceEEEe
Confidence 999999986 37899999998754 3578999999999999875 4 68887 888886 579999
Q ss_pred eEEEeccccCCccccccccceeeecCceEEEeccc-------------cCCHHHH-----------HHHHHHHHhcCCCE
Q 011729 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSL 200 (478)
Q Consensus 145 G~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~-------------i~~~~~i-----------~~~le~i~~~~~~l 200 (478)
|++|+++|.||||+ .+++||+|+++|++ |++++++ .++++++.++|+||
T Consensus 218 G~v~dk~~~~~~m~-------~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~l 290 (548)
T 1q3q_A 218 GVVIDKEVVHPRMP-------KRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANV 290 (548)
T ss_dssp SEEESCCCSSTTSC-------SEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCE
T ss_pred eEEEeccCCCCCCc-------ceecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCE
Confidence 99999999999985 36899999999998 7777775 79999999999999
Q ss_pred EEEecCcchhhhhhHHhhhcCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEe-
Q 011729 201 LVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT- 279 (478)
Q Consensus 201 vIi~~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~~~~v~i~- 279 (478)
||++++|+++++++|..|+ |++|++. |+++|+|||++|||+++++ ++++++++||+|+.|++.
T Consensus 291 vi~~~~I~~~al~~L~~~~------I~av~~~-----~k~~le~ia~~tGa~ii~~-----l~~~~~~~LG~a~~v~~~~ 354 (548)
T 1q3q_A 291 VFVQKGIDDLAQHYLAKYG------IMAVRRV-----KKSDMEKLAKATGAKIVTN-----VKDLTPEDLGYAEVVEERK 354 (548)
T ss_dssp EEESSCBCHHHHHHHHHTT------CEEECSC-----CHHHHHHHHHHHCCCCBSS-----GGGCCGGGCEEESEEEEEE
T ss_pred EEEcCCcCHHHHHHHHHCC------cEEEccC-----CHHHHHHHHHHhCCeEecc-----cccCCHHHCCCceEEEEEE
Confidence 9999999999999999865 7899866 7888999999999999986 899999999999999864
Q ss_pred --cceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHHHHHHHHHHHHH
Q 011729 280 --MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE 357 (478)
Q Consensus 280 --~~~~~~~~g~~~~~~i~~~~~~l~~~i~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~DAl~a~r~a~~ 357 (478)
+++|++|+||+++ +.|||+|||+|+++++|+||+++||||++|++++
T Consensus 355 ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~ 403 (548)
T 1q3q_A 355 LAGENMIFVEGCKNP-------------------------------KAVTILIRGGTEHVIDEVERALEDAVKVVKDVME 403 (548)
T ss_dssp ETTEEEEEEECCSSC-------------------------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCceEEEEecCCCC-------------------------------CeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999998764 5699999999999999999999999999999999
Q ss_pred cC-CcCCchHHHHHHHHHHHhhcCC-ChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCC
Q 011729 358 EG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR 431 (478)
Q Consensus 358 ~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~ 431 (478)
+| +|||||++|++++.+|++++.+ ++++|+++++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+
T Consensus 404 ~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~ 483 (548)
T 1q3q_A 404 DGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFE 483 (548)
T ss_dssp SCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTT
T ss_pred CCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCC
Confidence 99 9999999999999999998764 899999999999999999999999999999999 999863 34689999999
Q ss_pred CCcccccccCCCCCcccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 011729 432 GRWECFHFFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 478 (478)
Q Consensus 432 ~~~~~~~~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A~~iL~i 478 (478)
| ++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 484 g------------~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 518 (548)
T 1q3q_A 484 G------------KPADMLEKGIIEPLRVKKQAIKSASEAAIMILRI 518 (548)
T ss_dssp T------------EEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTC
T ss_pred C------------CccchhhcCCEecHHHHHHHHHHHHHHHHHHHHH
Confidence 9 9999999999999999999999999999999987
No 15
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.6e-83 Score=688.49 Aligned_cols=408 Identities=16% Similarity=0.181 Sum_probs=361.7
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|++.||+||++ + ++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 52 G~tIlk~i~~~hP~Akll--~----~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 125 (515)
T 3iyg_E 52 GATILSMMDVDHQIAKLM--V----ELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEH 125 (515)
T ss_pred HHHHHHHcccCCHHHHHH--H----HHHHHhhhhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 4 777899999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCC----HHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC-------CceeEe--cCCCccceeEEEe
Q 011729 84 LDCQARKITT----FEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-------DLITIF--DRKALYNELNFVK 144 (478)
Q Consensus 84 L~~~s~~v~~----~~~l~~vA~ts~~~------~~~la~li~~a~~~vg~~-------~~I~v~--~g~~~~d~~~lv~ 144 (478)
|+++++|++. .++|.++|+||+++ .+.|++++++|+..+... +.|+|+ .|++.. ++++++
T Consensus 126 L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~-ds~lv~ 204 (515)
T 3iyg_E 126 LDKISDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLE-DTKLIK 204 (515)
T ss_pred HHHhceecCCCccCHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcc-cceEEe
Confidence 9999988753 57899999999874 357899999999988641 236665 588775 589999
Q ss_pred eEEEeccccCCcccccccc-ceeeecCceEEE-----eccccCCHHHH-----------HHHHHHHHhcCCCEEEEecCc
Q 011729 145 GMKLEWGLKSPYFFTHKNK-KECVLDGALVLI-----YDTKISNSNVI-----------RQASLPCMMQGQSLLVVAEDV 207 (478)
Q Consensus 145 G~~~~~g~~~~~~~~~~~~-~~~~l~~~~Ili-----~d~~i~~~~~i-----------~~~le~i~~~~~~lvIi~~~i 207 (478)
||+||++|.||||+++.+. +...++.|+.+. ++.+|++++++ .++++++.++|+||||++++|
T Consensus 205 G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I 284 (515)
T 3iyg_E 205 GVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGF 284 (515)
T ss_pred eEEEecccccccccccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 9999999999999875442 333344444433 23346777665 688999999999999999999
Q ss_pred chhhhhhHHhhhcCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEE-----ecce
Q 011729 208 ENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA-----TMDN 282 (478)
Q Consensus 208 ~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~~~~v~i-----~~~~ 282 (478)
+++++++|..|+ +.+++++ ++++|+|||++|||+++++ ++++++++||+|++|++ ++++
T Consensus 285 ~~~al~~L~~~~------I~~v~~v-----~k~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig~~k~~ 348 (515)
T 3iyg_E 285 DDEANHLLLQND------LPAVRWV-----GGPEIELIAIATGGRIVPR-----FSELTAEKLGFAGLVKEISFGTTKDK 348 (515)
T ss_pred CHHHHHHHHHCC------CEEEecc-----CHHHHHHHHHHhCCEEecc-----cccCCHHHCCcceEEEEEEeccccce
Confidence 999999999876 4678888 4677999999999999986 89999999999999986 4589
Q ss_pred EEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHHHHHHHHHHHHHcC-Cc
Q 011729 283 VVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IV 361 (478)
Q Consensus 283 ~~~~~g~~~~~~i~~~~~~l~~~i~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~DAl~a~r~a~~~g-vV 361 (478)
+++|+||+++. .|||+|||+|+++++|+||+++||||++|+++++| +|
T Consensus 349 ~~~~~g~~~~~-------------------------------~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iV 397 (515)
T 3iyg_E 349 MLVIEQCKNSR-------------------------------AVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVV 397 (515)
T ss_pred EEEEEcCCCCc-------------------------------eEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 99999998763 58999999999999999999999999999999999 99
Q ss_pred CCchHHHHHHHHHHHhhcCC-ChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCeeEeCCCCCcc
Q 011729 362 PGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYNPARGRWE 435 (478)
Q Consensus 362 pGGGa~e~~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~----~~~~~G~d~~~~~~~ 435 (478)
||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+|
T Consensus 398 pGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g--- 474 (515)
T 3iyg_E 398 YGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHK--- 474 (515)
T ss_pred CCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCC---
Confidence 99999999999999999875 899999999999999999999999999999999 999863 346799999999
Q ss_pred cccccCCCCCcccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 011729 436 CFHFFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 478 (478)
Q Consensus 436 ~~~~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A~~iL~i 478 (478)
+++||++.|||||+.||+++|++|+++|++||+|
T Consensus 475 ---------~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~i 508 (515)
T 3iyg_E 475 ---------GTNDMKHQHVIETLIGKKQQISLATQMVRMILKI 508 (515)
T ss_pred ---------cccchHhccCEEcHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999999986
No 16
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=4.6e-84 Score=696.14 Aligned_cols=400 Identities=19% Similarity=0.247 Sum_probs=369.4
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|++.||+||++ + ++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 64 G~tIlk~i~v~hP~Akll--~----e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 137 (545)
T 1a6d_A 64 GATILKEMDVEHPTAKMI--V----EVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKI 137 (545)
T ss_dssp HHHHHHHSCCCSHHHHHH--H----GGGGCTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhccchHHHHH--H----HHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4 777899999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC-CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC---------CceeEe--cCCCccceeEEEee
Q 011729 84 LDCQARKIT-TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---------DLITIF--DRKALYNELNFVKG 145 (478)
Q Consensus 84 L~~~s~~v~-~~~~l~~vA~ts~~------~~~~la~li~~a~~~vg~~---------~~I~v~--~g~~~~d~~~lv~G 145 (478)
|+++++| + +.+.|.++|+||++ +++.|++++++|+.+++++ +.|+|+ +|++.. ++++++|
T Consensus 138 L~~~s~~-~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~-ds~lv~G 215 (545)
T 1a6d_A 138 IDEIAEK-STDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVN-DTQFISG 215 (545)
T ss_dssp HHHHCEE-CCCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCST-TCEEESE
T ss_pred HHHhcCC-CCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCce-eeEEEee
Confidence 9999999 7 78899999998753 4678999999999999865 368887 888886 5799999
Q ss_pred EEEeccccCCccccccccceeeecCceEEEeccc-------------cCCHHHH-----------HHHHHHHHhcCCCEE
Q 011729 146 MKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSLL 201 (478)
Q Consensus 146 ~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~-------------i~~~~~i-----------~~~le~i~~~~~~lv 201 (478)
++|+++|.||||+ .+++||+|+++|++ |++++++ .++++++.++|+|||
T Consensus 216 ~v~dk~~~~~~m~-------~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lv 288 (545)
T 1a6d_A 216 IVIDKEKVHSKMP-------DVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVV 288 (545)
T ss_dssp EEESCCCSCTTSC-------SEEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred EEEeccCCCCCCc-------ceecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 9999999999985 36899999999998 6666664 799999999999999
Q ss_pred EEecCcchhhhhhHHhhhcCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEe--
Q 011729 202 VVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT-- 279 (478)
Q Consensus 202 Ii~~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~~~~v~i~-- 279 (478)
|++++|+++++++|..|+ |++|++. |+++|+|||++|||+++++ ++++++++||+|+.|++.
T Consensus 289 i~~~~I~~~al~~L~~~~------I~av~~~-----~k~~le~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~i 352 (545)
T 1a6d_A 289 LCQKGIDDVAQHYLAKEG------IYAVRRV-----KKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEERKI 352 (545)
T ss_dssp EESSCBCHHHHHHHHHHT------CEEECSC-----CHHHHHHHHHHHCCCEESS-----GGGCCGGGCEEEEEEEEEEE
T ss_pred EECCCccHHHHHHHHHCC------eeEeccC-----CHHHHHHHHHHhCCeeecc-----cccCCHHHCCCceEEEEEEe
Confidence 999999999999999875 6899866 7888999999999999986 899999999999999864
Q ss_pred -cceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHHHHHHHHHHHHHc
Q 011729 280 -MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE 358 (478)
Q Consensus 280 -~~~~~~~~g~~~~~~i~~~~~~l~~~i~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~DAl~a~r~a~~~ 358 (478)
+++|++|+||+++ ++|||+|||+|+++++|+||+++||||++|+++++
T Consensus 353 g~~~~~~~~g~~~~-------------------------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~ 401 (545)
T 1a6d_A 353 GDDRMTFVMGCKNP-------------------------------KAVSILIRGGTDHVVSEVERALNDAIRVVAITKED 401 (545)
T ss_dssp TTEEEEEEEEESCS-------------------------------SCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCceEEEEecCCCC-------------------------------ceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 7999999998754 57999999999999999999999999999999999
Q ss_pred C-CcCCchHHHHHHHHHHHhhcCC-ChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCC
Q 011729 359 G-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARG 432 (478)
Q Consensus 359 g-vVpGGGa~e~~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~~ 432 (478)
| +|||||++|++++.+|++++.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. +..++|||+.+|
T Consensus 402 g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g 481 (545)
T 1a6d_A 402 GKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNN 481 (545)
T ss_dssp CEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTT
T ss_pred CCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccC
Confidence 9 9999999999999999999864 899999999999999999999999999999999 999863 346899999999
Q ss_pred CcccccccCCCCCcccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 011729 433 RWECFHFFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 478 (478)
Q Consensus 433 ~~~~~~~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A~~iL~i 478 (478)
++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 482 ------------~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 515 (545)
T 1a6d_A 482 ------------GVGDMKAKGVVDPLRVKTHALESAVEVATMILRI 515 (545)
T ss_dssp ------------EEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTC
T ss_pred ------------ccccchhcCccccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999987
No 17
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=6.1e-84 Score=695.32 Aligned_cols=401 Identities=19% Similarity=0.252 Sum_probs=369.0
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|++.||+||++ + ++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 63 G~tIlk~i~v~hP~Akll--~----e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 136 (543)
T 1a6d_B 63 GVTILKEMDVEHPAAKMM--V----EVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRV 136 (543)
T ss_dssp HHHHHHHSCCCSHHHHHH--H----HHHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccchHHHHH--H----HHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4 777899999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCC--HHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC--Cc-------eeEe--cCCCccceeEEEe
Q 011729 84 LDCQARKITT--FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN--DL-------ITIF--DRKALYNELNFVK 144 (478)
Q Consensus 84 L~~~s~~v~~--~~~l~~vA~ts~~------~~~~la~li~~a~~~vg~~--~~-------I~v~--~g~~~~d~~~lv~ 144 (478)
|+++++|++. .+.|.++|+||++ +++.|++++++|+.+++++ |. |+|+ +|++.. ++++++
T Consensus 137 L~~~a~~v~~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~-ds~lv~ 215 (543)
T 1a6d_B 137 IDEISTKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAID-DTQLIN 215 (543)
T ss_dssp HHHHCEECCTTHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGG-GCEEES
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCcc-ceeEEc
Confidence 9999999874 6889999997753 3678999999999999876 53 7877 888886 579999
Q ss_pred eEEEeccccCCccccccccceeeecCceEEEeccc-------------cCCHHHH-----------HHHHHHHHhcCCCE
Q 011729 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSL 200 (478)
Q Consensus 145 G~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~-------------i~~~~~i-----------~~~le~i~~~~~~l 200 (478)
|++|+++|.||||+ .+++||+|+++|++ |++++++ .++++++.+.|+||
T Consensus 216 G~v~dk~~~~~~m~-------~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~l 288 (543)
T 1a6d_B 216 GIIVDKEKVHPGMP-------DVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANV 288 (543)
T ss_dssp EEEESCCCSSTTSC-------SEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred cEEEecCCCCCCCc-------ceecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 99999999999985 36899999999998 6666664 79999999999999
Q ss_pred EEEecCcchhhhhhHHhhhcCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEE--
Q 011729 201 LVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA-- 278 (478)
Q Consensus 201 vIi~~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~~~~v~i-- 278 (478)
||++++|+++++++|..|+ |++|++. ++++|+|||++|||+++++ ++++++++||+|+.|++
T Consensus 289 vi~~~~I~~~al~~L~~~~------I~av~~v-----~k~~le~ia~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ 352 (543)
T 1a6d_B 289 VITQKGIDDMAQHYLSRAG------IYAVRRV-----KKSDMDKLAKATGASIVST-----IDEISSSDLGTAERVEQVK 352 (543)
T ss_dssp EEESSCBCHHHHHHHHHTT------CEEECSC-----CHHHHHHHHHHHTCCEESC-----GGGCCGGGCEEEEEEEEEE
T ss_pred EEECCCcCHHHHHHHHHCC------eeEeccC-----CHHHHHHHHHHhCCceecc-----cccCCHHHCCCceEEEEEE
Confidence 9999999999999999865 7899877 6888999999999999986 89999999999999986
Q ss_pred -ecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHHHHHHHHHHHHH
Q 011729 279 -TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE 357 (478)
Q Consensus 279 -~~~~~~~~~g~~~~~~i~~~~~~l~~~i~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~DAl~a~r~a~~ 357 (478)
+++++++|+||+++ +.|||+|||+|+++++|+||+++||||++|++++
T Consensus 353 ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~ 401 (543)
T 1a6d_B 353 VGEDYMTFVTGCKNP-------------------------------KAVSILVRGETEHVVDEMERSITDSLHVVASALE 401 (543)
T ss_dssp ETTEEEEEEEEESSS-------------------------------SCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCceEEEEecCCCC-------------------------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999998764 5699999999999999999999999999999999
Q ss_pred cC-CcCCchHHHHHHHHHHHhhcCC-ChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCC
Q 011729 358 EG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR 431 (478)
Q Consensus 358 ~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~ 431 (478)
+| +|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +..++|||+.+
T Consensus 402 ~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~ 481 (543)
T 1a6d_B 402 DGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFT 481 (543)
T ss_dssp HCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTT
T ss_pred CCCccCCccHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCC
Confidence 99 9999999999999999998764 889999999999999999999999999999999 999863 44689999999
Q ss_pred CCcccccccCCCCCcccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 011729 432 GRWECFHFFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 478 (478)
Q Consensus 432 ~~~~~~~~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A~~iL~i 478 (478)
| ++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 482 g------------~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 516 (543)
T 1a6d_B 482 G------------EIEDMVKNGVIEPIRVGKQAIESATEAAIMILRI 516 (543)
T ss_dssp T------------EEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHE
T ss_pred C------------cccchhhcCceecHHHHHHHHHHHHHHHHHHHHH
Confidence 9 9999999999999999999999999999999986
No 18
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.3e-83 Score=687.26 Aligned_cols=401 Identities=15% Similarity=0.184 Sum_probs=359.8
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|++.||++|++ + ++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 53 G~tIlk~i~v~hP~akll--~----~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 126 (518)
T 3iyg_D 53 GATILKQMQVLHPAARML--V----ELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEI 126 (518)
T ss_pred HHHHHHHcccchHHHHHH--H----HHHHHhhhhhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4 777899999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCCC------hhHHHHHHHHHHhhcc---CCc-----eeEe--cCCCccceeEEEee
Q 011729 84 LDCQARKIT--TFEEIAQVGTTAANGD------GEIGELIAKVFEKGWE---NDL-----ITIF--DRKALYNELNFVKG 145 (478)
Q Consensus 84 L~~~s~~v~--~~~~l~~vA~ts~~~~------~~la~li~~a~~~vg~---~~~-----I~v~--~g~~~~d~~~lv~G 145 (478)
|++++.|++ +.+.|.++|+||++++ +.|++++++|+.+++. +|. |+|+ .|++. +++++++|
T Consensus 127 L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~-~ds~lv~G 205 (518)
T 3iyg_D 127 LTDMSRPVELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTI-DDCELVEG 205 (518)
T ss_pred HHHheeeCCCCChHHHHHHhHhhhccccchhhHHHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCCh-hhheEecc
Confidence 999999987 6789999999999864 7899999999999985 554 6665 46666 47899999
Q ss_pred EEEeccccCCccccccccceeeecCceEEEeccc-------------cCCHH-----------HHHHHHHHHHhcCCCEE
Q 011729 146 MKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSN-----------VIRQASLPCMMQGQSLL 201 (478)
Q Consensus 146 ~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~-------------i~~~~-----------~i~~~le~i~~~~~~lv 201 (478)
|+||++|.| .|+ ..++||+|++++++ |++++ ++.++++++.+.|+|||
T Consensus 206 ~~~dk~~~~-~mp-------~~i~n~kIlll~~~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lv 277 (518)
T 3iyg_D 206 LVLTQKVAN-SGI-------TRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVL 277 (518)
T ss_pred EEEeccccc-CCC-------ccccCceEEEEEeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 999999998 332 23566666666654 44554 46788999999999999
Q ss_pred EE-----ecCcchhhhhhHHhhhcCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEE
Q 011729 202 VV-----AEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRV 276 (478)
Q Consensus 202 Ii-----~~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~~~~v 276 (478)
|+ +++|+++++++|..|+ |++||+|+ +.+|+|||++|||+++++ ++++++++||+|++|
T Consensus 278 i~~k~i~~~~I~~~Al~~L~~~~------I~av~~~~-----~~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v 341 (518)
T 3iyg_D 278 LIQKSILRDALSDLALHFLNKMK------IMVVKDIE-----REDIEFICKTIGTKPVAH-----VDQFTADMLGSAELA 341 (518)
T ss_pred EEeccccccCcCHHHHHHHHHcC------cEEEecCC-----HHHHHHHHHHhCCEEecc-----cccCCHHHCCcCcEE
Confidence 99 7999999999999754 79999995 456999999999999997 899999999999999
Q ss_pred EE---ec-ceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHHHHHHHH
Q 011729 277 IA---TM-DNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAV 352 (478)
Q Consensus 277 ~i---~~-~~~~~~~g~~~~~~i~~~~~~l~~~i~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~DAl~a~ 352 (478)
++ ++ +++++|+||++ ++++|||+|||+|+++++|+||+++||||++
T Consensus 342 ~~~~~g~~~~~~~~~g~~~------------------------------~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~ 391 (518)
T 3iyg_D 342 EEVSLNGSGKLIKITGCAS------------------------------PGKTVTIVVRGSNKLVIEEAERSIHDALCVI 391 (518)
T ss_pred EEEEeCCCceEEEEECCCC------------------------------CCceEEEEECCCCHHHHHHHHHHHHHHHHHH
Confidence 75 44 68899999854 2468999999999999999999999999999
Q ss_pred HHHHHcC-CcCCchHHHHHHHHHHHhhcCC-ChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCee
Q 011729 353 QAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLG 426 (478)
Q Consensus 353 r~a~~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~~~G 426 (478)
|+++++| +|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|
T Consensus 392 r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G 471 (518)
T 3iyg_D 392 RCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTG 471 (518)
T ss_pred HHHHhCCCEeecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCcee
Confidence 9999998 9999999999999999999775 899999999999999999999999999999999 999873 456799
Q ss_pred EeCCCCCcccccccCCCCCcccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 011729 427 YNPARGRWECFHFFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 478 (478)
Q Consensus 427 ~d~~~~~~~~~~~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A~~iL~i 478 (478)
||+.+| ++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 472 ~d~~~g------------~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 511 (518)
T 3iyg_D 472 INVRKG------------GISNILEELVVQPLLVSVSALTLATETVRSILKI 511 (518)
T ss_pred EeCCCC------------cccchhhccCEEcHHHHHHHHHHHHHHHHHHHhh
Confidence 999999 9999999999999999999999999999999987
No 19
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.3e-82 Score=680.94 Aligned_cols=407 Identities=15% Similarity=0.188 Sum_probs=357.9
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|++.||+||++ + ++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 53 G~tIlk~i~v~hP~Akll--~----e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~ 126 (512)
T 3iyg_Q 53 AATILRELEVQHPAAKMI--V----MASHMQEQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEI 126 (512)
T ss_pred HHHHHHHcccCCHHHHHH--H----HHHHHhhhhhCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4 778899999999999999999999999999999 999999999999999999999
Q ss_pred Hhcc----ccccCCHHHHHHHHHHhcCC-----ChhHHHHHHHHHHhhccC-CceeEe-------cCCCccceeEEEeeE
Q 011729 84 LDCQ----ARKITTFEEIAQVGTTAANG-----DGEIGELIAKVFEKGWEN-DLITIF-------DRKALYNELNFVKGM 146 (478)
Q Consensus 84 L~~~----s~~v~~~~~l~~vA~ts~~~-----~~~la~li~~a~~~vg~~-~~I~v~-------~g~~~~d~~~lv~G~ 146 (478)
|+++ +.++++.++|.++|+||+++ ++.|++++++|+.+++++ +.|+++ .|+++ +++++++||
T Consensus 127 L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~-~ds~lv~G~ 205 (512)
T 3iyg_Q 127 LPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGV-HSSSVLHGM 205 (512)
T ss_pred HHHhhcccCCCCCCHHHHHHHHHHHhCCCCccchHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCc-ccceEEeeE
Confidence 9998 56677889999999999986 688999999999999876 444443 37777 579999999
Q ss_pred EEeccccCCccccccc-cceeeecCce-EEEeccc----cCCHHHHHHH-------HH----HHHhcCCCEEEEecCcch
Q 011729 147 KLEWGLKSPYFFTHKN-KKECVLDGAL-VLIYDTK----ISNSNVIRQA-------SL----PCMMQGQSLLVVAEDVEN 209 (478)
Q Consensus 147 ~~~~g~~~~~~~~~~~-~~~~~l~~~~-Ili~d~~----i~~~~~i~~~-------le----~i~~~~~~lvIi~~~i~~ 209 (478)
+||++|.+ |+++.+ .+...++.|+ +..++.+ |++++++.++ ++ ++.++|+||||++++|++
T Consensus 206 ~~dk~~~~--~~~~~~n~kI~ll~~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~ 283 (512)
T 3iyg_Q 206 VFKKETEG--DVTSVKDAKIAVYSCPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVAD 283 (512)
T ss_pred EEecCcCC--CCcccccCceEEEecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccH
Confidence 99999976 665433 2222334444 4444444 7778887766 55 888999999999999999
Q ss_pred hhhhhHHhhhcCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEE---ecceEEEE
Q 011729 210 EVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TMDNVVII 286 (478)
Q Consensus 210 ~al~~l~~n~~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~~~~v~i---~~~~~~~~ 286 (478)
.++++|.. .+|++||+|+ +.+|+|||++|||+++++ ++++++++||+|++|++ +++++++|
T Consensus 284 la~~~l~k------~~I~av~~~~-----~~dle~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~~g~~~~~~~ 347 (512)
T 3iyg_Q 284 MALHYANK------YNIMLVRLNS-----KWDLRRLCKTVGATALPR-----LNPPVLEEMGHCDSVYLSEVGDTQVVVF 347 (512)
T ss_pred HHHHHHHH------CCeEEEEeCC-----HHHHHHHHHHhCCEEecc-----cccCCHHHCCcccEEEEEEeCCeEEEEE
Confidence 99887764 5689999995 445999999999999996 89999999999999975 46689999
Q ss_pred cCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHHHHHHHHHHHHHcC-CcCCch
Q 011729 287 GGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSG 365 (478)
Q Consensus 287 ~g~~~~~~i~~~~~~l~~~i~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~DAl~a~r~a~~~g-vVpGGG 365 (478)
.+|+. +|++|||+|||+|+++++|+||+++||||++|+++++| +|||||
T Consensus 348 ~~~~~------------------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGG 397 (512)
T 3iyg_Q 348 KHEKE------------------------------DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGG 397 (512)
T ss_pred EcccC------------------------------CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCc
Confidence 98742 35789999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHhhcCC-ChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCC--CCCccccc
Q 011729 366 VALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPA--RGRWECFH 438 (478)
Q Consensus 366 a~e~~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~--~~~~~~~~ 438 (478)
++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+. +|
T Consensus 398 a~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g------ 471 (512)
T 3iyg_Q 398 ATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVP------ 471 (512)
T ss_pred HHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCC------
Confidence 9999999999999865 899999999999999999999999999999999 999873 4578999999 45
Q ss_pred ccCCCCCcccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 011729 439 FFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 478 (478)
Q Consensus 439 ~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A~~iL~i 478 (478)
++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 472 ------~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~i 505 (512)
T 3iyg_Q 472 ------AVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLRV 505 (512)
T ss_pred ------cccchHhccCeEcHHHHHHHHHHHHHHHHHHHhH
Confidence 8999999999999999999999999999999986
No 20
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.7e-82 Score=678.60 Aligned_cols=401 Identities=12% Similarity=0.155 Sum_probs=359.9
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|++.||+||++ + ++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 51 G~tIlk~i~v~hP~Akll--~----e~a~~qd~e~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 124 (515)
T 3iyg_G 51 GNAILREIQVQHPAAKSM--I----EISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMIST 124 (515)
T ss_pred HHHHHHhcccCCHHHHHH--H----HHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4 777899999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC--C--------ceeEe--cCCCccceeEEE
Q 011729 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN--D--------LITIF--DRKALYNELNFV 143 (478)
Q Consensus 84 L~~~s~~v~--~~~~l~~vA~ts~~~------~~~la~li~~a~~~vg~~--~--------~I~v~--~g~~~~d~~~lv 143 (478)
|++++.|++ +.+.|.++|+||+++ .+.+++++++|+..+.++ + .|.|+ +|++.. +++++
T Consensus 125 L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~-ds~lv 203 (515)
T 3iyg_G 125 LKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIE-DSCVL 203 (515)
T ss_pred HHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcc-cceEE
Confidence 999999886 367899999998863 245778999999988632 2 14554 688875 78999
Q ss_pred eeEEEeccccCCccccccccceeeecCceEEEecc-------------ccCCHHHHHHHHH-----------HHHhcCCC
Q 011729 144 KGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT-------------KISNSNVIRQASL-----------PCMMQGQS 199 (478)
Q Consensus 144 ~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~-------------~i~~~~~i~~~le-----------~i~~~~~~ 199 (478)
+|++|+++|.||.|+ .+++||+|+++|+ +|++++++.++++ ++.+.|.+
T Consensus 204 ~G~v~dk~~~~~~m~-------~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~ 276 (515)
T 3iyg_G 204 RGVMINKDVTHPRMR-------RYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPD 276 (515)
T ss_pred eeEEEeCCCCCCCCc-------ceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999764 4799999999998 5778888887777 88899888
Q ss_pred EEEEecCcchhhhhhHHhhhcCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCcee-eeEEEE
Q 011729 200 LLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS-CKRVIA 278 (478)
Q Consensus 200 lvIi~~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~-~~~v~i 278 (478)
++|+.++|++.++++|.. .+|+++++. ++++|+|||++|||+++++ ++++++++||+ |+.|++
T Consensus 277 vIi~~~~I~~~al~~L~~------~~I~av~~~-----~k~~leria~~tGa~ii~~-----l~~l~~~~LG~~a~~v~~ 340 (515)
T 3iyg_G 277 VVITEKGISDLAQHYLMR------ANITAIRRV-----RKTDNNRIARACGARIVSR-----PEELREEDVGTGAGLLEI 340 (515)
T ss_pred EEEECCccCHHHHHHHHH------CCceeeccC-----CHHHHHHHHHHhCCeeecc-----ccccChhhcCCcccEEEE
Confidence 888889999999998885 447888766 6888999999999999996 89999999999 999975
Q ss_pred ---ecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHHHHHHHHHHH
Q 011729 279 ---TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAA 355 (478)
Q Consensus 279 ---~~~~~~~~~g~~~~~~i~~~~~~l~~~i~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~DAl~a~r~a 355 (478)
++++|+||+||+++. .|||+|||+|+++++|+||++|||||++|++
T Consensus 341 ~~~g~~~~~~i~g~~~~~-------------------------------~~TIllrG~t~~~l~E~er~i~Dal~~~r~~ 389 (515)
T 3iyg_G 341 KKIGDEYFTFITECKDPK-------------------------------ACTILLRGASKEILSEVERNLQDAMQVCRNV 389 (515)
T ss_pred EEECCceEEEEeCCCCCC-------------------------------eEEEEEcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456899999998763 5999999999999999999999999999999
Q ss_pred HHc-CCcCCchHHHHHHHHHHHhhcCC-ChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCeeEe
Q 011729 356 KEE-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYN 428 (478)
Q Consensus 356 ~~~-gvVpGGGa~e~~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~----~~~~~G~d 428 (478)
+++ ++|||||++|++++++|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||
T Consensus 390 ~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d 469 (515)
T 3iyg_G 390 LLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVN 469 (515)
T ss_pred hhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeee
Confidence 975 59999999999999999998765 899999999999999999999999999999999 999874 24578999
Q ss_pred CCCCCcccccccCCCCCcccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 011729 429 PARGRWECFHFFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 478 (478)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A~~iL~i 478 (478)
+.+| ++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 470 ~~~g------------~~~d~~~~gi~dp~~vk~~al~~A~e~a~~iL~i 507 (515)
T 3iyg_G 470 GETG------------TLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRI 507 (515)
T ss_pred CCCC------------cccccHHcCCEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999 9999999999999999999999999999999986
No 21
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=5.4e-83 Score=689.63 Aligned_cols=407 Identities=19% Similarity=0.201 Sum_probs=360.5
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|++.||+||++ + ++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 87 G~tIlk~i~v~hP~Akll--~----e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 160 (562)
T 3p9d_E 87 GATILSQMELDNEIAKLL--V----QLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISK 160 (562)
T ss_dssp HHHHHHHSCCCSHHHHHH--H----HHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCCHHHHHH--H----HHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4 777899999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCCH------HHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC-------CceeEe--cCCCccceeEE
Q 011729 84 LDCQARKITTF------EEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-------DLITIF--DRKALYNELNF 142 (478)
Q Consensus 84 L~~~s~~v~~~------~~l~~vA~ts~~~------~~~la~li~~a~~~vg~~-------~~I~v~--~g~~~~d~~~l 142 (478)
|+++++|++.. +.|.++|+||+++ .+.|++++++|+.++... +.|+|+ .|+++. ++++
T Consensus 161 L~~~s~~v~~~~~~~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~-ds~l 239 (562)
T 3p9d_E 161 LEETCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSIS-DSKL 239 (562)
T ss_dssp TTTTTSSSSBCCCSSCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGG-GCEE
T ss_pred HHHhccCcCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChh-hhce
Confidence 99999987632 6899999999874 357999999999988642 346665 588876 4799
Q ss_pred EeeEEEeccccCCccccccccceeeecCceEEEeccc-------------cCCHHH-----------HHHHHHHHHhcCC
Q 011729 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNV-----------IRQASLPCMMQGQ 198 (478)
Q Consensus 143 v~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~-------------i~~~~~-----------i~~~le~i~~~~~ 198 (478)
++|++||++|.||||+++.+ ....+++|+|++++++ |+++++ +.++++++.++|+
T Consensus 240 veGmv~dk~~~sp~m~~~~~-~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~ 318 (562)
T 3p9d_E 240 INGVILDKDFSHPQMPKCVL-PKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGA 318 (562)
T ss_dssp ESSEEESSCCCTTSCCC------TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred eeeEEEecCCCCCCcCcccc-cccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999987541 0112356666666543 455555 6799999999999
Q ss_pred CEEEEecCcchhhhhhHHhhhcCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEE
Q 011729 199 SLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA 278 (478)
Q Consensus 199 ~lvIi~~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~~~~v~i 278 (478)
||||++++|+++++++|..|++ .+++++ ++++|+|||++|||+++++ ++++++++||+|+.|++
T Consensus 319 ~vvI~~~~I~~~Al~~L~~~~I------~~v~~v-----~k~~le~ia~~TGa~iis~-----l~~l~~~~LG~a~~v~~ 382 (562)
T 3p9d_E 319 DVVICQWGFDDEANHLLLQNDL------PAVRWV-----GGQELEHIAISTNGRIVPR-----FQDLSKDKLGTCSRIYE 382 (562)
T ss_dssp SCCEECSSCCSHHHHHHHTTTC------CCEECC-----CTTTHHHHHHHHCCCEEES-----SSCCCTTSCEECSCEEE
T ss_pred cEEEEeCCCCHHHHHHHHHCCC------EEEecc-----CHHHHHHHHHHhCCEEEec-----cccCCHHHCCcceEEEE
Confidence 9999999999999999998774 568888 4677999999999999996 89999999999999987
Q ss_pred -----ecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHHHHHHHHH
Q 011729 279 -----TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQ 353 (478)
Q Consensus 279 -----~~~~~~~~~g~~~~~~i~~~~~~l~~~i~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~DAl~a~r 353 (478)
+++++++|+||+++ +.|||+|||+|+++++|+||+++||||++|
T Consensus 383 ~~ig~~~~~~~~i~g~~~~-------------------------------~~~TIllrG~te~~l~E~kr~i~DAL~~~r 431 (562)
T 3p9d_E 383 QEFGTTKDRMLIIEQSKET-------------------------------KTVTCFVRGSNKMIVDEAERALHDSLCVVR 431 (562)
T ss_dssp ECCSSSSCCEEEECCCSCC-------------------------------SCCEEEEECTTTTTHHHHTHHHHHHHHHHH
T ss_pred EEeccCCceEEEEecCCCC-------------------------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 36889999999875 358999999999999999999999999999
Q ss_pred HHHHcC-CcCCchHHHHHHHHHHHhhcCC-ChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCee
Q 011729 354 AAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLG 426 (478)
Q Consensus 354 ~a~~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~----~~~~~G 426 (478)
+++++| +|||||++|++++++|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|
T Consensus 432 ~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G 511 (562)
T 3p9d_E 432 NLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIG 511 (562)
T ss_dssp HHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBC
T ss_pred HHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCcee
Confidence 999999 9999999999999999998765 899999999999999999999999999999999 999863 456899
Q ss_pred EeCCCCCcccccccCCCCCcccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 011729 427 YNPARGRWECFHFFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 478 (478)
Q Consensus 427 ~d~~~~~~~~~~~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A~~iL~i 478 (478)
||+.+| ++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 512 ~d~~~g------------~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 551 (562)
T 3p9d_E 512 VDCLGY------------GSNDMKELFVVDPFIGKKQQILLATQLCRMILKI 551 (562)
T ss_dssp CBTTTT------------BCCBTTTTTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred EecCCC------------cccchHhccCEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999 9999999999999999999999999999999986
No 22
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=7.8e-84 Score=694.54 Aligned_cols=403 Identities=16% Similarity=0.166 Sum_probs=361.9
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|++.||+||++ + ++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 66 G~TIlk~i~v~hP~Akll--~----e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~ 139 (550)
T 3p9d_G 66 GATILKLLDVVHPAAKTL--V----DISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEK 139 (550)
T ss_dssp HHHHTTTSCCCSHHHHHH--H----HHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCCHHHHHH--H----HHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 4 788899999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCC-----HHHHHHHHHHhcC------CChhHHHHHHHHHHhhcc-C------CceeEecCCCccceeEEEee
Q 011729 84 LDCQARKITT-----FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWE-N------DLITIFDRKALYNELNFVKG 145 (478)
Q Consensus 84 L~~~s~~v~~-----~~~l~~vA~ts~~------~~~~la~li~~a~~~vg~-~------~~I~v~~g~~~~d~~~lv~G 145 (478)
|+++++|++. .+.|.++|+||++ +++.|++++++|+.++++ + +.+.+ +|+++.| +++++|
T Consensus 140 L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv-~Gg~~~d-s~lv~G 217 (550)
T 3p9d_G 140 INELAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKI-PGGAMEE-SLFING 217 (550)
T ss_dssp HHHSEECCCCC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBC-CSSCGGG-CCCCSS
T ss_pred HHHhcccCCCCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHHHHHhCccccCchheeEEEe-cCCCccc-eeEEee
Confidence 9999999863 5679999998864 367899999999999984 3 34444 4888865 599999
Q ss_pred EEEeccccCCccccccccceeeecCceEEEeccc-------------cCCHHHHH-----------HHHHHHHhcCCCEE
Q 011729 146 MKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVIR-----------QASLPCMMQGQSLL 201 (478)
Q Consensus 146 ~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~-------------i~~~~~i~-----------~~le~i~~~~~~lv 201 (478)
++||++|.||||.+.|+ .++||+|+++|++ |++++++. ++++++.++|++||
T Consensus 218 ~~~dk~~~s~yf~~~~~----~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vV 293 (550)
T 3p9d_G 218 VAFKKTFSYAGFEQQPK----KFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIV 293 (550)
T ss_dssp EEECCCSSCTTCSCSCS----CCSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEE
T ss_pred EEEeccccccccccCcc----cccCceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999987554 5999999999987 45555544 47788999999999
Q ss_pred EEecCcchhhhhhHHhhhcCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEE---
Q 011729 202 VVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA--- 278 (478)
Q Consensus 202 Ii~~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~~~~v~i--- 278 (478)
|++++|++.++++|.. .+++++++. ++++|+|||++|||+++++ ++++++++||+|+.|++
T Consensus 294 i~~~~I~dla~~~L~~------~gI~~v~~v-----~k~~lerIa~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~i 357 (550)
T 3p9d_G 294 LSKLPIGDLATQFFAD------RNIFCAGRV-----SADDMNRVIQAVGGSIQST-----TSDIKPEHLGTCALFEEMQI 357 (550)
T ss_dssp EESSCCCHHHHHTTGG------GTCEEEECC-----CTTHHHHHHHHTCCCCBSS-----GGGCCGGGCCCCSBCCCCCC
T ss_pred EECCCccHHHHHHHHH------cCCccccCc-----CHHHHHHHHHHhCCceecc-----hhhCCHHHcCCceEEEEEEe
Confidence 9999999988887764 346888877 5778999999999999986 89999999999999975
Q ss_pred ecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHHHHHHHHHHHHHc
Q 011729 279 TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE 358 (478)
Q Consensus 279 ~~~~~~~~~g~~~~~~i~~~~~~l~~~i~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~DAl~a~r~a~~~ 358 (478)
+++++++|.||+++ ++|||+|||+|+++++|+||+++||||++|+++++
T Consensus 358 g~e~~~~~~g~~~~-------------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~ 406 (550)
T 3p9d_G 358 GSERYNLFQGCPQA-------------------------------KTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQN 406 (550)
T ss_dssp SSSCCEEEBCCTTC-------------------------------CCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCeEEEEEecCCCC-------------------------------ceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhc
Confidence 68899999998754 46999999999999999999999999999999999
Q ss_pred C-CcCCchHHHHHHHHHHHhhcCC-ChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCC
Q 011729 359 G-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARG 432 (478)
Q Consensus 359 g-vVpGGGa~e~~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~~ 432 (478)
| +|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+|
T Consensus 407 g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g 486 (550)
T 3p9d_G 407 KLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETE 486 (550)
T ss_dssp CCEEETTTHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSS
T ss_pred CCcccCCCHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCC
Confidence 9 9999999999999999998765 899999999999999999999999999999999 999773 456899999999
Q ss_pred CcccccccCCCCCcccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 011729 433 RWECFHFFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 478 (478)
Q Consensus 433 ~~~~~~~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A~~iL~i 478 (478)
++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 487 ------------~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~i 520 (550)
T 3p9d_G 487 ------------NIGDNFAKFVWEPALVKINALNSATEATNLILSV 520 (550)
T ss_dssp ------------SBCCHHHHTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred ------------cccchHhccCEecHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999999986
No 23
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.5e-82 Score=678.77 Aligned_cols=400 Identities=17% Similarity=0.230 Sum_probs=352.4
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|++.||++|++ + ++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 52 G~tIlk~i~v~hp~akll--~----~~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 125 (517)
T 3iyg_Z 52 GNVLLHEMQIQHPTASLI--A----KVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQF 125 (517)
T ss_pred HHHHHHHccCcCHHHHHH--H----HHHHHHHHHhCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 4 777899999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC-CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccCC------ceeEe--cCCCccceeEEEeeEEE
Q 011729 84 LDCQARKIT-TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEND------LITIF--DRKALYNELNFVKGMKL 148 (478)
Q Consensus 84 L~~~s~~v~-~~~~l~~vA~ts~~~------~~~la~li~~a~~~vg~~~------~I~v~--~g~~~~d~~~lv~G~~~ 148 (478)
|+++++|++ +.+.|.++|+||+++ .+.|++++++|+..+...+ .|.++ .|++. +++++++||+|
T Consensus 126 L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~-~ds~lv~G~v~ 204 (517)
T 3iyg_Z 126 LEQVKVSKEMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSE-TDTSLIRGLVL 204 (517)
T ss_pred HHhhCcCCCCCHHHHHHHHHHHhccccchhHHHHHHHHHHHHhheeccCCCcCChhHheeeeecCCCc-cccceEeeEEE
Confidence 999999987 778999999999874 3568888888988775432 23443 56665 57899999999
Q ss_pred eccccCCccccccccceeeecCceEEEeccccC-------------CHHHH-----------HHHHHHHHh--------c
Q 011729 149 EWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSNVI-----------RQASLPCMM--------Q 196 (478)
Q Consensus 149 ~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~i~-------------~~~~i-----------~~~le~i~~--------~ 196 (478)
|++|.||+|+ .+++||+|+++|++|+ +++++ ...++.+.. .
T Consensus 205 dk~~~~p~m~-------~~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~ 277 (517)
T 3iyg_Z 205 DHGARHPDMK-------KRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDS 277 (517)
T ss_pred eccCCCCCcc-------ccccCCeEEEecccccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Confidence 9999999874 4799999999998753 33332 223344432 3
Q ss_pred CCCEEEEe-cCcchhhhhhHHhhhcCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCC-ceeee
Q 011729 197 GQSLLVVA-EDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLK-LGSCK 274 (478)
Q Consensus 197 ~~~lvIi~-~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~-LG~~~ 274 (478)
++|+||++ ++|++.++++|..+ +++++++. ++.+|+|||++|||+++++ ++++++++ ||+|+
T Consensus 278 ~~~lvIi~~~~I~d~al~~L~~~------gI~~v~~v-----~~~~leria~~tGa~iv~~-----l~~l~~~~~LG~a~ 341 (517)
T 3iyg_Z 278 DKGFVVINQKGIDPFSLDALAKE------GIIALRRA-----KRRNMERLTLACGGIALNS-----LDDLNPDCLLGHAG 341 (517)
T ss_pred CCceEEEecccCCHHHHHHHHHC------CCEEEEec-----CHHHHHHHHHHhCCEEecc-----hhhCcccccCCcce
Confidence 56777665 89999999999874 36899988 4667999999999999996 89999999 99999
Q ss_pred EE---EEecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHHHHHHH
Q 011729 275 RV---IATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHA 351 (478)
Q Consensus 275 ~v---~i~~~~~~~~~g~~~~~~i~~~~~~l~~~i~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~DAl~a 351 (478)
| .+++++++||+||++++ .|||+|||+|+++++|+||+++||||+
T Consensus 342 -v~e~~ig~~~~~~~~g~~~~~-------------------------------~~TI~lrG~t~~~l~E~kr~l~DAl~~ 389 (517)
T 3iyg_Z 342 -VYEYTLGEEKFTFIEKCNNPR-------------------------------SVTLLIKGPNKHTLTQIKDAIRDGLRA 389 (517)
T ss_pred -EEEEEEcCceEEEEeCCCCch-------------------------------hheeeecCCcHHHHHHHHHHHHHHHHH
Confidence 9 57899999999998764 389999999999999999999999999
Q ss_pred HHHHHHcC-CcCCchHHHHHHHHHHHhhcCC-ChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCe
Q 011729 352 VQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDL 425 (478)
Q Consensus 352 ~r~a~~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~~~ 425 (478)
+|+++++| +|||||++|++++++|++++.+ ++++|+|+++|++||+.+|++||+|||+|+.++ .+|++. +++++
T Consensus 390 ~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~ 469 (517)
T 3iyg_Z 390 VKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLV 469 (517)
T ss_pred HHHHHhcceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcE
Confidence 99999999 9999999999999999999875 899999999999999999999999999999999 999874 45689
Q ss_pred eEeCCCCCcccccccCCCCCcccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 011729 426 GYNPARGRWECFHFFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 478 (478)
Q Consensus 426 G~d~~~~~~~~~~~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A~~iL~i 478 (478)
|||+.+| ++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 470 G~d~~~g------------~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 510 (517)
T 3iyg_Z 470 GVDLNTG------------EPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLV 510 (517)
T ss_pred EEeCCCC------------cccchhhccCeecHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999 9999999999999999999999999999999986
No 24
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=1.7e-83 Score=690.07 Aligned_cols=400 Identities=19% Similarity=0.209 Sum_probs=363.7
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC--CCChHHHHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG--RANLTGLTQGFRMAADAVVR 82 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~--G~~P~~I~~G~~~A~~~~~~ 82 (478)
..||||+|++.||+||++ +++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.+++
T Consensus 60 G~tIlk~i~~~hP~Akll------~e~a~~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~ 133 (527)
T 3p9d_B 60 GATILKSIPLDNPAAKVL------VNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALD 133 (527)
T ss_dssp HHHHHHTCCCCCHHHHHH------HHHHHHHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCHHHHHH------HHHHHHhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 4778899999999999999999999999999996 99999999999999999999
Q ss_pred HHhccccccCC-----HHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccCC---ceeEe--cCCCccceeEEEeeE
Q 011729 83 NLDCQARKITT-----FEEIAQVGTTAANG------DGEIGELIAKVFEKGWEND---LITIF--DRKALYNELNFVKGM 146 (478)
Q Consensus 83 ~L~~~s~~v~~-----~~~l~~vA~ts~~~------~~~la~li~~a~~~vg~~~---~I~v~--~g~~~~d~~~lv~G~ 146 (478)
+|+++++++++ .++|.++|+||+++ ++.|++++++|+.++++++ .|+|+ .|++.. ++++++||
T Consensus 134 ~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~-ds~lv~G~ 212 (527)
T 3p9d_B 134 ALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLS-DSFLDEGF 212 (527)
T ss_dssp HHHHTCBCCCCCHHHHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSS-CCCEESSC
T ss_pred HHHHhCccCCCcchhhHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCcc-ccEEEEeE
Confidence 99999999875 68899999999875 5789999999999999887 68887 476664 68999999
Q ss_pred EEeccccCCccccccccceeeecCceEEEeccc--------------cCCHHHH-----------HHHHHHHHhcCCCEE
Q 011729 147 KLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK--------------ISNSNVI-----------RQASLPCMMQGQSLL 201 (478)
Q Consensus 147 ~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~--------------i~~~~~i-----------~~~le~i~~~~~~lv 201 (478)
+||++|.+|| |+ .++||+|++++++ +++++++ .++++++.++|+|||
T Consensus 213 ~~dk~~~~~~----p~----~~~n~kIlll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vv 284 (527)
T 3p9d_B 213 ILAKKFGNNQ----PK----RIENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTF 284 (527)
T ss_dssp CCSCCCSSSC----CS----CCSSCEEEEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEE
T ss_pred EEecccCCCC----Ce----eeecceEEEeccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 9999999997 22 4689999998764 3445543 678999999999999
Q ss_pred EEecCcchhhhhhHHhhhcCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEE---E
Q 011729 202 VVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---A 278 (478)
Q Consensus 202 Ii~~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~~~~v~---i 278 (478)
|++++|++.++++|..|+ +++|++++ +.+|+|||++|||+++++ ++++++++||+|+.|+ +
T Consensus 285 i~~~~I~~~al~~L~~~~------i~av~~~~-----~~dle~ia~~tGa~iv~~-----~~~~~~~~LG~a~~v~~~~i 348 (527)
T 3p9d_B 285 INRQLIYDYPEQLFTDLG------INSIEHAD-----FEGVERLALVTGGEVVST-----FDEPSKCKLGECDVIEEIML 348 (527)
T ss_dssp ESSCCCTTTHHHHHHHTC------BCCCCCCH-----HHHHHHHHHHTCCCCCST-----TSCCTTSCEECSBCCBCCCS
T ss_pred EECCCCCHHHHHHHHHCC------CEEEecCC-----HHHHHHHHHHhCCEEecc-----hhhCCHHHCCCCcEEEEEEe
Confidence 999999999999999865 68999994 456999999999999986 8999999999999997 6
Q ss_pred ecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHHHHHHHHHHHHHc
Q 011729 279 TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE 358 (478)
Q Consensus 279 ~~~~~~~~~g~~~~~~i~~~~~~l~~~i~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~DAl~a~r~a~~~ 358 (478)
+++++++|.||+++ ++|||+|||+|+++++|+||+++||||++|+++++
T Consensus 349 g~~~~~~~~g~~~~-------------------------------~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~ 397 (527)
T 3p9d_B 349 GEQPFLKFSGCKAG-------------------------------EACTIVLRGATDQTLDEAERSLHDALSVLSQTTKE 397 (527)
T ss_dssp SSCCBCCBCSSCCS-------------------------------CCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHC
T ss_pred cceEEEEEECCCCC-------------------------------CEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 78999999998653 67999999999999999999999999999999999
Q ss_pred C-CcCCchHHHHHHHHHHHhhcCC-ChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCC
Q 011729 359 G-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARG 432 (478)
Q Consensus 359 g-vVpGGGa~e~~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~~ 432 (478)
| +|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+|
T Consensus 398 g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g 477 (527)
T 3p9d_B 398 TRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNG 477 (527)
T ss_dssp CCEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSST
T ss_pred CCcccCCcHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCC
Confidence 9 9999999999999999998765 899999999999999999999999999999999 999874 456899999999
Q ss_pred CcccccccCCCCCcccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 011729 433 RWECFHFFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 478 (478)
Q Consensus 433 ~~~~~~~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A~~iL~i 478 (478)
+++||++.|||||+.||+++|++|+++|++||+|
T Consensus 478 ------------~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 511 (527)
T 3p9d_B 478 ------------TIADMRQLGIVESYKLKRAVVSSASEAAEVLLRV 511 (527)
T ss_dssp ------------TCCCHHHHTCEEETTHHHHHHHHHHHHHHHHHHC
T ss_pred ------------CCcchHhccCEEcHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999999986
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=1.2e-81 Score=677.99 Aligned_cols=401 Identities=17% Similarity=0.222 Sum_probs=349.6
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|++.||++|++ + ++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 59 G~tIlk~i~v~hP~akll--~----e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 132 (546)
T 3p9d_F 59 GKVLLTEMQIQSPTAVLI--A----RAAAAQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKF 132 (546)
T ss_dssp HHHHHHTSCCCCHHHHHH--H----HHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCcCHHHHHH--H----HHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH
Confidence 469999999999999998 4 777899999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC----CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC-------CceeEe--cCCCccceeEEEe
Q 011729 84 LDCQARKIT----TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-------DLITIF--DRKALYNELNFVK 144 (478)
Q Consensus 84 L~~~s~~v~----~~~~l~~vA~ts~~~------~~~la~li~~a~~~vg~~-------~~I~v~--~g~~~~d~~~lv~ 144 (478)
|++++.|++ +.+.|.++|+||+++ .+.|++++++|+..+.+. ..|.+. .|++. +++++++
T Consensus 133 L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~-~ds~lv~ 211 (546)
T 3p9d_F 133 LDEFKISKTNLSNDREFLLQVARSSLLTKVDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSP-KDTTFIK 211 (546)
T ss_dssp HHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCT-TTCCCCS
T ss_pred HHHhhccccccccCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCc-cccEEEe
Confidence 999999884 578899999999874 357899999999988531 135554 46665 5689999
Q ss_pred eEEEeccccCCccccccccceeeecCceEEEeccccC-------------CHH----------H-HHHHHHHHHh-----
Q 011729 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSN----------V-IRQASLPCMM----- 195 (478)
Q Consensus 145 G~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~i~-------------~~~----------~-i~~~le~i~~----- 195 (478)
|++|+++|.+|+|+ .+++||+|+++|++++ +++ + +...++.+..
T Consensus 212 G~v~dk~~~~~~m~-------~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v 284 (546)
T 3p9d_F 212 GLVLDHGGRHPDMP-------TRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEV 284 (546)
T ss_dssp SCEESCCCCSSSSC-------SSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred eEEEecccccccCc-------ceecCceEEEecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999764 4799999999997653 221 1 2234455443
Q ss_pred ----cCCCEEEE-ecCcchhhhhhHHhhhcCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCc
Q 011729 196 ----QGQSLLVV-AEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKL 270 (478)
Q Consensus 196 ----~~~~lvIi-~~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~L 270 (478)
+|+|+||+ .++|+++++++|..|+ ++++|+. ++.+|+|||++|||+++++ ++++++++|
T Consensus 285 ~~~~~g~~~vIi~~k~I~~~Al~~L~~~g------I~~vr~v-----~~~~leria~~tGa~ii~~-----l~~l~~~~L 348 (546)
T 3p9d_F 285 CGMDPDKGFVIINQKGIDPMSLDVFAKHN------ILALRRA-----KRRNMERLQLVTGGEAQNS-----VEDLSPQIL 348 (546)
T ss_dssp --------CEEEESSCCCHHHHHHHTTTT------CEEECCC-----CHHHHHHHHHTTTBCCCCC-----CSSCSTTCC
T ss_pred hhhccCCceEEEecCcCcHHHHHHHHHCC------CeeEecC-----CHHHHHHHHHHhCCEEecc-----hhhCCHhHC
Confidence 56775555 5699999999999875 5889987 4667999999999999986 899999999
Q ss_pred eeeeEE---EEecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHHH
Q 011729 271 GSCKRV---IATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITN 347 (478)
Q Consensus 271 G~~~~v---~i~~~~~~~~~g~~~~~~i~~~~~~l~~~i~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~D 347 (478)
|+|+.| .+++++|+||+||++++ .|||+|||+|+++++|+||+++|
T Consensus 349 G~a~~v~~~~ig~~~~~~i~g~~~~~-------------------------------~~tI~lrG~te~~l~E~kr~l~D 397 (546)
T 3p9d_F 349 GFSGLVYQETIGEEKFTYVTENTDPK-------------------------------SCTILIKGSTHYALAQTKDAVRD 397 (546)
T ss_dssp BCCCCBCBCCCSSCCCEECSSCSCCS-------------------------------CEEEECCCSCHHHHHHHHHHHHH
T ss_pred CcccEEEEEEecCceEEEEecCCCCc-------------------------------eEEEEECCCCHHHHHHHHHHHHH
Confidence 999999 57899999999998764 59999999999999999999999
Q ss_pred HHHHHHHHHHcC-CcCCchHHHHHHHHHHHh---hcCC-ChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc-
Q 011729 348 ALHAVQAAKEEG-IVPGSGVALLYASKELDK---LQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ- 420 (478)
Q Consensus 348 Al~a~r~a~~~g-vVpGGGa~e~~~s~~L~~---~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~- 420 (478)
|||++|+++++| +|||||++|++++.+|++ |+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++.
T Consensus 398 Al~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h 477 (546)
T 3p9d_F 398 GLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDEL 477 (546)
T ss_dssp HHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHH
T ss_pred HHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHh
Confidence 999999999999 999999999999999998 4654 899999999999999999999999999999999 999763
Q ss_pred -------CCCCeeEeCCCCCcccccccCCCCCcccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 011729 421 -------DSSDLGYNPARGRWECFHFFSEPGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 478 (478)
Q Consensus 421 -------~~~~~G~d~~~~~~~~~~~~~~~~~~~dm~~~gI~dp~~v~~~al~~A~~~A~~iL~i 478 (478)
++.++|||+.+| +++||++.|||||+.||+++|++|+++|++||+|
T Consensus 478 ~~~~~~~~~~~~G~d~~~g------------~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~i 530 (546)
T 3p9d_F 478 DDAQDSDETRYVGVDLNIG------------DSCDPTIEGIWDSYRVLRNAITGATGIASNLLLC 530 (546)
T ss_dssp HHHTTSTTSSCCCCBTTTT------------BCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred hhhhcccCCceeeEeCCCC------------eecchHhccCEecHHHHHHHHHHHHHHHHHHHHH
Confidence 446799999999 9999999999999999999999999999999986
No 26
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=3.5e-81 Score=676.22 Aligned_cols=401 Identities=15% Similarity=0.142 Sum_probs=356.6
Q ss_pred HHHHhhhccccCcccccccchhhhhhhhhhccccccCCcchHHHhhhHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 011729 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (478)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~v~~s~~~s~~qd~evGDGTTTvvvLa~~Ll~~a~~li~-G~~P~~I~~G~~~A~~~~~~~ 83 (478)
..||||+|++.||+||++ + ++|++||+++||||||+||||++||++|.+++. |+||+.|++||++|++.++++
T Consensus 68 G~TIlk~i~v~hP~Akll--~----e~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~ 141 (568)
T 3p9d_H 68 AATMLRELDIVHPAVKVL--V----MATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKE 141 (568)
T ss_dssp HHHHTTTCCCCCHHHHHH--H----HHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccCCHHHHHH--H----HHHHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999 4 777899999999999999999999999999999 999999999999999999999
Q ss_pred Hhcccccc----CCHHHHHHHHHHhcC-----CChhHHHHHHHHHHhhccC-----C-------ceeEe--cCCCcccee
Q 011729 84 LDCQARKI----TTFEEIAQVGTTAAN-----GDGEIGELIAKVFEKGWEN-----D-------LITIF--DRKALYNEL 140 (478)
Q Consensus 84 L~~~s~~v----~~~~~l~~vA~ts~~-----~~~~la~li~~a~~~vg~~-----~-------~I~v~--~g~~~~d~~ 140 (478)
|++++.++ .+.+.|.++|+||++ ++++|++++++|+.+++++ + .|+|+ .|++.. ++
T Consensus 142 L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~-dS 220 (568)
T 3p9d_H 142 LDEMVVGEITDKNDKNELLKMIKPVISSKKYGSEDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLS-NS 220 (568)
T ss_dssp HHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGG-GC
T ss_pred HHHhccccCCCCCCHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcc-hh
Confidence 99999876 467889999999864 3578999999999999874 3 47776 488886 47
Q ss_pred EEEeeEEEeccccCCccccccccceeeec---CceEEEeccc-------------cCCHHHHHH-----------HHHHH
Q 011729 141 NFVKGMKLEWGLKSPYFFTHKNKKECVLD---GALVLIYDTK-------------ISNSNVIRQ-----------ASLPC 193 (478)
Q Consensus 141 ~lv~G~~~~~g~~~~~~~~~~~~~~~~l~---~~~Ili~d~~-------------i~~~~~i~~-----------~le~i 193 (478)
++++|++|+++|. +| +.+++ ||+|+++|++ |++++++.+ +++++
T Consensus 221 ~lv~G~v~dk~~~--~m-------~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I 291 (568)
T 3p9d_H 221 TVIKGMVFNREPE--GH-------VKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEI 291 (568)
T ss_dssp EEESSCCBSSCBS--SG-------GGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeccEEEeeccc--CC-------cEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999874 23 34677 9999999987 667766654 78889
Q ss_pred HhcCCCEEEEecCcchhhhhhHHhhhcCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceee
Q 011729 194 MMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSC 273 (478)
Q Consensus 194 ~~~~~~lvIi~~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~~ 273 (478)
.+.|+||||++++|++.++++|..++ |++||+++ +.+|+|||++|||+++++ ++++++++||+|
T Consensus 292 ~~~g~~vvi~~~~I~~~al~~L~~~g------I~av~~v~-----~~~leria~~tGa~ivs~-----l~~l~~~~LG~a 355 (568)
T 3p9d_H 292 ADMGVECIVAGAGVGELALHYLNRYG------ILVLKVPS-----KFELRRLCRVCGATPLPR-----LGAPTPEELGLV 355 (568)
T ss_dssp HHTTCCEEEECSCCCHHHHHHHHHHT------CEEECCCC-----HHHHHHHHHHHSCCCCSS-----SSCCCGGGCEEC
T ss_pred HhcCCeEEEECCCcChHHHHHHHHCC------eEEEecCC-----HHHHHHHHHHhCCEEEec-----cccCCHHHCCcc
Confidence 99999999999999999999998754 79999994 667999999999999996 899999999999
Q ss_pred eEEE---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHHHHHH
Q 011729 274 KRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALH 350 (478)
Q Consensus 274 ~~v~---i~~~~~~~~~g~~~~~~i~~~~~~l~~~i~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~~l~E~~r~l~DAl~ 350 (478)
+.|+ ++++++++|++|+. |++++|||+|||+|+++++|+||+++||||
T Consensus 356 ~~v~~~~ig~~~~~~~~g~~~-----------------------------l~~~~~TIllrG~t~~~l~E~er~i~DAL~ 406 (568)
T 3p9d_H 356 ETVKTMEIGGDRVTVFKQEQG-----------------------------EISRTSTIILRGATQNNLDDIERAIDDGVA 406 (568)
T ss_dssp SCCCCCEETTEECBCCCCCSS-----------------------------SCCSSCEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecCceEEEEecCCC-----------------------------CCCCeEEEEECCCcHHHHHHHHHHHHHHHH
Confidence 9986 45689999999862 234689999999999999999999999999
Q ss_pred HHHHHHH--c-CCcCCchHHHHHHHHHHHhhcCC-ChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc-----
Q 011729 351 AVQAAKE--E-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----- 420 (478)
Q Consensus 351 a~r~a~~--~-gvVpGGGa~e~~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~~~~~La~NaG~d~~~v-~~l~~~----- 420 (478)
++|++++ + ++|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++.
T Consensus 407 vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~ 486 (568)
T 3p9d_H 407 AVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTE 486 (568)
T ss_dssp HHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSS
T ss_pred HHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhc
Confidence 9999999 5 59999999999999999999765 899999999999999999999999999999999 999874
Q ss_pred ------CCCCeeEeCCCCCcccccccCCCCC---cccccccCCccccccHHHHHHHHHHHHHHHhcC
Q 011729 421 ------DSSDLGYNPARGRWECFHFFSEPGN---YVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 478 (478)
Q Consensus 421 ------~~~~~G~d~~~~~~~~~~~~~~~~~---~~dm~~~gI~dp~~v~~~al~~A~~~A~~iL~i 478 (478)
+++++|||+.+| + +.||++.|||||+.||+++|++|+++|++||+|
T Consensus 487 ~~~~~~~~~~~G~d~~~g------------~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 541 (568)
T 3p9d_H 487 PGAVKTDHLYKGVDIDGE------------SDEGVKDIREENIYDMLATKKFAINVATEAATTVLSI 541 (568)
T ss_dssp CCCCCCTTSSSCCCHHHH------------TCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC---
T ss_pred ccccccCCCceeEcccCC------------CcccccChHHccCEEcHHHHHHHHHHHHHHHHHHHhH
Confidence 235789999988 7 999999999999999999999999999999987
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.5e-48 Score=355.88 Aligned_cols=189 Identities=38% Similarity=0.559 Sum_probs=184.7
Q ss_pred eEEEeeEEEeccccCCccccccccceeeecCceEEEeccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhhhhhHHhhh
Q 011729 140 LNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDF 219 (478)
Q Consensus 140 ~~lv~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~i~~~~~i~~~le~i~~~~~~lvIi~~~i~~~al~~l~~n~ 219 (478)
+++++||.||+||+||||+|++++|.++++||+||++|.+|++.++++|+||.+.++|+||+||++|+++++|++|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHH
Q 011729 220 TCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERC 299 (478)
Q Consensus 220 ~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~g~~~~~~i~~~~ 299 (478)
++|.++|||||+|+||++||+.|+|||.+|||++++.+.++++++++.++||+|++|.+++++|++++|.++++.|+.|+
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcch----HHHHHHHhhhcCCeEEE
Q 011729 300 EQLRSTIKLSTS----DKLKDRLAKLSGGYAVL 328 (478)
Q Consensus 300 ~~l~~~i~~~~s----~~l~~Rl~~l~g~~~tI 328 (478)
++++++|+.++| ++|+||||||+||+|+|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999888 99999999999999865
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=7.8e-47 Score=346.63 Aligned_cols=185 Identities=35% Similarity=0.527 Sum_probs=180.7
Q ss_pred EeeEEEeccccCCccccccccceeeecCceEEEeccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhhhhhHHhhhcCC
Q 011729 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCT 222 (478)
Q Consensus 143 v~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~i~~~~~i~~~le~i~~~~~~lvIi~~~i~~~al~~l~~n~~~~ 222 (478)
.+||.||+||+||||++++++|.++++||+||++|.+|+++++++|+||.+.++|+||+||++|+++++|++|+.|+++|
T Consensus 12 ~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg 91 (201)
T 3osx_A 12 SEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRG 91 (201)
T ss_dssp CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHT
T ss_pred ccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccc
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHH
Q 011729 223 TEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQL 302 (478)
Q Consensus 223 ~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~g~~~~~~i~~~~~~l 302 (478)
.++|||||+|+||++||+.|+|||.+|||++++.+.++++++++.++||+|++|.+++++|++++|.++++.|+.|++++
T Consensus 92 ~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~qI 171 (201)
T 3osx_A 92 IVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQI 171 (201)
T ss_dssp SCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcch----HHHHHHHhhhcCCeEE
Q 011729 303 RSTIKLSTS----DKLKDRLAKLSGGYAV 327 (478)
Q Consensus 303 ~~~i~~~~s----~~l~~Rl~~l~g~~~t 327 (478)
+++|+.++| ++|+||||||+||+|+
T Consensus 172 r~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 172 RQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 999999888 9999999999999874
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=7.2e-38 Score=274.25 Aligned_cols=144 Identities=34% Similarity=0.535 Sum_probs=141.9
Q ss_pred eEEEeccccCCccccccccceeeecCceEEEeccccCCHHHHHHHHHHHHhcCCCEEEEecCcchhhhhhHHhhhcCCCc
Q 011729 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTE 224 (478)
Q Consensus 145 G~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~i~~~~~i~~~le~i~~~~~~lvIi~~~i~~~al~~l~~n~~~~~~ 224 (478)
||.||+||+||||++++++|.+++++|+||++|.+|++.++++|.||++.++|+||+||++|+++++|++|+.|+++|.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEecceEEEEcC
Q 011729 225 KVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGG 288 (478)
Q Consensus 225 ~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~g 288 (478)
++||||+|+||++||+.|+|||.+|||++++.+.++++++++.++||+|++|.+++++|++++|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999976
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.86 E-value=1.1e-21 Score=181.59 Aligned_cols=144 Identities=10% Similarity=0.163 Sum_probs=119.7
Q ss_pred eeEEEeeEEEeccccCCccccccccceeeecCceEEEeccccC-------------CHH-----------HHHHHHHHHH
Q 011729 139 ELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSN-----------VIRQASLPCM 194 (478)
Q Consensus 139 ~~~lv~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~i~-------------~~~-----------~i~~~le~i~ 194 (478)
+|++++|++|++++.+|.|+ ..++||+|+++|++++ +++ .+..++++|.
T Consensus 3 dS~lv~Gvvl~k~~~~~~mp-------k~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~ 75 (178)
T 1gml_A 3 DSCVLRGVMINKDVTHPRMR-------RYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDII 75 (178)
T ss_dssp CCSEEEEEEESCCCSSTTSC-------CEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEEEeccccCCCCC-------cccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 58899999999999887664 4789999999998653 221 2457788899
Q ss_pred hcCCCEEEEecCcchhhhhhHHhhhcCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCcee-e
Q 011729 195 MQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS-C 273 (478)
Q Consensus 195 ~~~~~lvIi~~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~-~ 273 (478)
+.|.++|+++++|++.++++|..+ +|+++++. ++++|++||++|||+++++ ++++++++||+ |
T Consensus 76 ~~g~nVVl~~k~I~d~a~~~l~k~------gI~~vr~v-----~~~dleria~atGa~iv~~-----~~~l~~~~LG~~~ 139 (178)
T 1gml_A 76 QLKPDVVITEKGISDLAQHYLMRA------NVTAIRRV-----RKTDNNRIARACGARIVSR-----PEELREDDVGTGA 139 (178)
T ss_dssp TTCCSEEEESSCBCHHHHHHHHHT------TCEEECCC-----CHHHHHHHHHHHCCCEESC-----GGGCCGGGSBCCE
T ss_pred hcCCcEEEECCcccHHHHHHHHHC------CCEEEecC-----CHHHHHHHHHHhCCeEeCC-----hhhCChhhhCCcc
Confidence 999999999999999999999874 47999988 4777999999999999996 89999999999 9
Q ss_pred eEEE---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCeEEEEeccCchh
Q 011729 274 KRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKA 336 (478)
Q Consensus 274 ~~v~---i~~~~~~~~~g~~~~~~i~~~~~~l~~~i~~~~s~~l~~Rl~~l~g~~~tI~v~G~t~~ 336 (478)
+.|+ ++++++++|+||.+++ .|||++||+|.+
T Consensus 140 ~~v~~~~ig~~~~~~~~gc~~~~-------------------------------~~TIllRG~~~~ 174 (178)
T 1gml_A 140 GLLEIKKIGDEYFTFITDCKDPK-------------------------------ACTILLRGASHH 174 (178)
T ss_dssp EEEEEEEETTEEEEEEEEESSTT-------------------------------SCEEEEEC----
T ss_pred cEEEEEEECCeEEEEEECCCCCC-------------------------------EEEEEEECCCcc
Confidence 9987 5788999999997653 599999999875
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.76 E-value=4.3e-18 Score=154.68 Aligned_cols=127 Identities=17% Similarity=0.264 Sum_probs=107.9
Q ss_pred EeeEEEeccccCCccccccccceeeecCceEEEeccccC-------------CHHH-----------HHHHHHHHHhcCC
Q 011729 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSNV-----------IRQASLPCMMQGQ 198 (478)
Q Consensus 143 v~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~i~-------------~~~~-----------i~~~le~i~~~~~ 198 (478)
++|++|++++.+|.|+ ..++||+|+++|++++ ++++ +..++++|.+.|.
T Consensus 1 i~Gvv~~k~~~~~~mp-------k~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMP-------DVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCTTSC-------SEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCCCCC-------cCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 4799999999888764 3788999999998654 3322 4577888999999
Q ss_pred CEEEEecCcchhhhhhHHhhhcCCCccEEEEEecccchhhhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEE-
Q 011729 199 SLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI- 277 (478)
Q Consensus 199 ~lvIi~~~i~~~al~~l~~n~~~~~~~v~avk~~~~g~~rk~~le~la~~tG~~v~s~~~~~~~~~~~~~~LG~~~~v~- 277 (478)
++|+++++|++.++++|..+ +|++++++ ++++|+|||++|||+++++ ++++++++||+|+.|+
T Consensus 74 nVVl~~k~I~d~a~~~l~k~------gI~~v~~v-----~~~dleria~atGa~iv~~-----~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKE------GIYAVRRV-----KKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHT------TCEEECSC-----CHHHHHHHHHHHTCCCBSS-----TTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHC------CCEEEccC-----CHHHHHHHHHHhCCeeeCc-----cccCCcccCccceEEEE
Confidence 99999999999999999874 47999998 4777999999999999996 8999999999999996
Q ss_pred --EecceEEEEcCCCCh
Q 011729 278 --ATMDNVVIIGGSGEL 292 (478)
Q Consensus 278 --i~~~~~~~~~g~~~~ 292 (478)
++++++++|+||.+.
T Consensus 138 ~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp EEETTEEEEEEESCC--
T ss_pred EEECCeEEEEEECCCCc
Confidence 578999999999764
Done!