Query 011730
Match_columns 478
No_of_seqs 164 out of 1446
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 04:36:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011730.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011730hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02280 IAA-amino acid hydrol 100.0 1.3E-61 2.8E-66 507.4 50.2 408 63-470 60-477 (478)
2 PLN02693 IAA-amino acid hydrol 100.0 1E-56 2.2E-61 467.4 46.0 371 96-469 45-423 (437)
3 COG1473 AbgB Metal-dependent a 100.0 5.2E-57 1.1E-61 456.5 42.1 370 95-469 9-391 (392)
4 PRK06915 acetylornithine deace 100.0 6.3E-50 1.4E-54 417.0 39.0 367 81-469 2-420 (422)
5 TIGR01891 amidohydrolases amid 100.0 4.7E-49 1E-53 402.5 40.6 349 101-453 2-361 (363)
6 PRK08588 succinyl-diaminopimel 100.0 1.2E-48 2.6E-53 401.5 39.6 349 98-468 2-377 (377)
7 PRK13013 succinyl-diaminopimel 100.0 3.6E-47 7.9E-52 396.8 40.3 362 86-468 4-423 (427)
8 PRK06837 acetylornithine deace 100.0 2.3E-46 5E-51 390.5 38.5 368 78-468 2-423 (427)
9 PRK07338 hypothetical protein; 100.0 1.3E-45 2.9E-50 382.1 40.5 359 83-468 4-399 (402)
10 PRK06133 glutamate carboxypept 100.0 2.1E-45 4.5E-50 381.3 40.8 360 84-469 25-409 (410)
11 PRK13009 succinyl-diaminopimel 100.0 2.1E-45 4.5E-50 377.2 37.9 348 99-467 3-374 (375)
12 TIGR01246 dapE_proteo succinyl 100.0 4.4E-45 9.6E-50 374.1 35.8 345 101-466 2-370 (370)
13 PRK13004 peptidase; Reviewed 100.0 6.4E-45 1.4E-49 376.6 37.2 362 85-469 4-398 (399)
14 TIGR03320 ygeY M20/DapE family 100.0 6.8E-45 1.5E-49 375.9 37.3 358 86-468 3-395 (395)
15 PRK13983 diaminopimelate amino 100.0 8E-45 1.7E-49 375.9 36.9 355 95-465 2-399 (400)
16 PRK08651 succinyl-diaminopimel 100.0 9.3E-45 2E-49 374.8 36.8 353 94-468 2-392 (394)
17 TIGR03526 selenium_YgeY putati 100.0 8.2E-45 1.8E-49 375.3 36.2 358 86-468 3-395 (395)
18 PRK05111 acetylornithine deace 100.0 2.8E-44 6.1E-49 369.9 36.4 344 97-468 4-382 (383)
19 TIGR01910 DapE-ArgE acetylorni 100.0 4.3E-45 9.3E-50 374.9 30.0 340 102-458 2-375 (375)
20 PRK08596 acetylornithine deace 100.0 4.2E-44 9.2E-49 372.8 37.8 364 86-471 3-420 (421)
21 TIGR01880 Ac-peptdase-euk N-ac 100.0 7.3E-44 1.6E-48 368.9 36.8 357 97-467 8-398 (400)
22 PRK07522 acetylornithine deace 100.0 7E-44 1.5E-48 367.1 35.2 344 98-467 4-384 (385)
23 PRK06446 hypothetical protein; 100.0 1.9E-43 4.2E-48 369.4 36.3 355 98-467 2-434 (436)
24 TIGR01892 AcOrn-deacetyl acety 100.0 2E-43 4.4E-48 360.9 32.8 333 102-462 1-363 (364)
25 PRK08652 acetylornithine deace 100.0 7.5E-43 1.6E-47 354.4 35.5 332 98-468 2-346 (347)
26 PRK09133 hypothetical protein; 100.0 8.2E-43 1.8E-47 368.3 37.0 356 94-468 33-470 (472)
27 PRK00466 acetyl-lysine deacety 100.0 9.4E-43 2E-47 353.8 34.7 330 95-469 7-345 (346)
28 PRK08201 hypothetical protein; 100.0 2.3E-42 5E-47 363.5 37.5 366 85-467 3-454 (456)
29 PRK07907 hypothetical protein; 100.0 8E-42 1.7E-46 358.6 39.4 368 84-466 6-446 (449)
30 PRK07473 carboxypeptidase; Pro 100.0 9.8E-42 2.1E-46 349.7 38.9 344 95-466 8-375 (376)
31 PRK13007 succinyl-diaminopimel 100.0 5.2E-42 1.1E-46 349.0 34.3 331 95-463 4-351 (352)
32 PRK09104 hypothetical protein; 100.0 6E-41 1.3E-45 353.4 40.2 367 84-467 5-462 (464)
33 TIGR01883 PepT-like peptidase 100.0 1.8E-41 4E-46 346.2 34.8 333 99-463 1-360 (361)
34 PRK08262 hypothetical protein; 100.0 2.1E-41 4.5E-46 358.9 34.6 359 95-468 41-485 (486)
35 PRK07079 hypothetical protein; 100.0 1.5E-40 3.2E-45 350.7 39.2 373 81-472 4-460 (469)
36 PRK04443 acetyl-lysine deacety 100.0 7.9E-41 1.7E-45 339.9 34.1 329 97-466 5-348 (348)
37 PRK12892 allantoate amidohydro 100.0 1.2E-40 2.7E-45 346.1 35.9 338 97-468 9-411 (412)
38 PRK08737 acetylornithine deace 100.0 1.2E-40 2.6E-45 339.9 34.8 336 95-465 3-363 (364)
39 PRK13381 peptidase T; Provisio 100.0 2.6E-40 5.5E-45 342.8 36.7 343 99-467 2-403 (404)
40 TIGR01900 dapE-gram_pos succin 100.0 1.3E-40 2.8E-45 341.2 33.6 323 103-448 1-373 (373)
41 TIGR01886 dipeptidase dipeptid 100.0 1.6E-40 3.5E-45 349.5 33.6 354 87-468 4-466 (466)
42 PRK07906 hypothetical protein; 100.0 2.6E-40 5.5E-45 345.1 34.5 348 101-465 2-425 (426)
43 COG0624 ArgE Acetylornithine d 100.0 1.4E-39 3E-44 337.9 37.8 361 94-468 9-408 (409)
44 PRK09290 allantoate amidohydro 100.0 3.2E-39 6.9E-44 335.5 37.3 337 97-469 6-412 (413)
45 PRK07318 dipeptidase PepV; Rev 100.0 7.3E-40 1.6E-44 345.1 32.4 351 87-468 5-466 (466)
46 PRK05469 peptidase T; Provisio 100.0 3.3E-39 7.2E-44 334.9 36.2 345 98-469 2-407 (408)
47 PRK12893 allantoate amidohydro 100.0 1.4E-38 3.1E-43 330.6 38.8 339 97-469 9-411 (412)
48 TIGR01902 dapE-lys-deAc N-acet 100.0 2.3E-39 5E-44 327.6 31.8 324 102-468 1-335 (336)
49 PRK12891 allantoate amidohydro 100.0 7.4E-38 1.6E-42 325.2 40.6 338 99-470 11-412 (414)
50 PRK12890 allantoate amidohydro 100.0 3.5E-37 7.5E-42 320.4 39.3 334 99-468 10-412 (414)
51 TIGR01882 peptidase-T peptidas 100.0 7.7E-38 1.7E-42 324.6 33.6 344 98-467 3-407 (410)
52 PRK07205 hypothetical protein; 100.0 9.8E-38 2.1E-42 327.2 34.7 350 94-469 7-444 (444)
53 TIGR01893 aa-his-dipept aminoa 100.0 7.3E-37 1.6E-41 323.1 32.8 339 97-466 3-476 (477)
54 PRK06156 hypothetical protein; 100.0 1.4E-36 3.1E-41 323.5 35.1 353 94-468 42-516 (520)
55 TIGR01879 hydantase amidase, h 100.0 8.7E-36 1.9E-40 308.5 36.6 321 112-466 25-401 (401)
56 TIGR03176 AllC allantoate amid 100.0 2.1E-35 4.5E-40 305.6 37.8 337 98-468 3-404 (406)
57 PRK13799 unknown domain/N-carb 100.0 2.6E-35 5.5E-40 317.1 39.6 340 94-468 177-590 (591)
58 PRK15026 aminoacyl-histidine d 100.0 4.2E-35 9E-40 308.2 34.6 337 97-466 9-482 (485)
59 PRK13590 putative bifunctional 100.0 1.8E-34 3.9E-39 310.8 39.9 341 95-469 178-589 (591)
60 PRK08554 peptidase; Reviewed 100.0 6.2E-35 1.3E-39 304.5 32.3 350 99-467 2-437 (438)
61 TIGR01887 dipeptidaselike dipe 100.0 1E-34 2.2E-39 303.4 32.0 341 98-463 2-447 (447)
62 KOG2275 Aminoacylase ACY1 and 100.0 1.6E-32 3.5E-37 270.1 30.0 353 99-466 26-417 (420)
63 KOG2276 Metalloexopeptidases [ 100.0 1.7E-26 3.7E-31 225.3 31.0 368 84-467 4-471 (473)
64 COG2195 PepD Di- and tripeptid 99.9 2E-20 4.4E-25 190.1 19.9 342 97-466 4-411 (414)
65 PF01546 Peptidase_M20: Peptid 99.7 3.7E-17 8.1E-22 151.1 11.1 169 157-464 1-188 (189)
66 PF07687 M20_dimer: Peptidase 99.7 4E-16 8.6E-21 131.7 12.2 102 257-358 4-110 (111)
67 TIGR03106 trio_M42_hydro hydro 99.3 7.4E-10 1.6E-14 111.8 22.1 69 97-166 2-71 (343)
68 COG4187 RocB Arginine degradat 99.2 2.7E-10 5.8E-15 113.5 17.1 250 97-352 7-322 (553)
69 PRK09961 exoaminopeptidase; Pr 99.2 6.2E-11 1.3E-15 119.9 12.5 65 101-166 3-67 (344)
70 TIGR03107 glu_aminopep glutamy 99.1 1.3E-09 2.7E-14 110.2 13.6 293 102-466 2-341 (350)
71 PRK10199 alkaline phosphatase 99.0 6.5E-09 1.4E-13 103.8 16.8 122 101-225 38-188 (346)
72 PRK09864 putative peptidase; P 98.9 1.6E-08 3.5E-13 102.0 13.1 64 101-166 3-66 (356)
73 COG1363 FrvX Cellulase M and r 98.9 7.2E-08 1.6E-12 96.6 16.7 68 98-166 2-70 (355)
74 KOG2194 Aminopeptidases of the 96.5 0.011 2.4E-07 65.0 9.2 125 99-238 58-224 (834)
75 PF04389 Peptidase_M28: Peptid 94.4 0.041 8.9E-07 50.1 3.8 73 155-238 2-88 (179)
76 KOG3946 Glutaminyl cyclase [Po 92.3 2.3 4.9E-05 41.3 11.7 108 86-205 39-159 (338)
77 PF05343 Peptidase_M42: M42 gl 91.6 0.65 1.4E-05 46.0 7.7 44 407-458 246-292 (292)
78 PF05343 Peptidase_M42: M42 gl 88.3 0.45 9.7E-06 47.2 3.5 24 143-166 2-26 (292)
79 TIGR01893 aa-his-dipept aminoa 82.8 2.1 4.5E-05 45.6 5.5 44 305-354 336-379 (477)
80 COG2234 Iap Predicted aminopep 69.7 12 0.00026 39.1 6.8 59 153-226 208-274 (435)
81 PTZ00371 aspartyl aminopeptida 69.4 11 0.00023 40.0 6.3 77 380-465 373-454 (465)
82 cd00433 Peptidase_M17 Cytosol 67.0 1.4E+02 0.003 31.8 13.9 109 96-208 152-283 (468)
83 PRK02256 putative aminopeptida 65.6 8.7 0.00019 40.6 4.7 76 380-464 380-460 (462)
84 PRK02813 putative aminopeptida 63.7 12 0.00027 39.2 5.4 75 380-463 346-425 (428)
85 PRK00913 multifunctional amino 58.0 2E+02 0.0043 30.7 13.1 111 96-208 169-297 (483)
86 PTZ00412 leucyl aminopeptidase 54.8 1.5E+02 0.0032 32.1 11.4 109 96-208 210-342 (569)
87 TIGR03107 glu_aminopep glutamy 51.7 40 0.00087 34.4 6.6 58 181-241 170-236 (350)
88 KOG2526 Predicted aminopeptida 50.2 75 0.0016 33.0 8.0 84 142-238 194-304 (555)
89 PRK05015 aminopeptidase B; Pro 47.6 2.5E+02 0.0055 29.3 11.6 41 97-137 99-142 (424)
90 PRK09961 exoaminopeptidase; Pr 45.5 61 0.0013 32.9 6.9 77 380-466 254-333 (344)
91 PRK06156 hypothetical protein; 39.2 1.7E+02 0.0038 31.4 9.5 25 308-332 240-264 (520)
92 PF00883 Peptidase_M17: Cytoso 37.9 44 0.00095 33.4 4.3 37 101-137 1-37 (311)
93 PF05450 Nicastrin: Nicastrin; 37.8 68 0.0015 30.7 5.5 59 154-225 1-74 (234)
94 COG1363 FrvX Cellulase M and r 36.5 70 0.0015 32.6 5.5 77 381-467 268-347 (355)
95 KOG2597 Predicted aminopeptida 35.4 3.2E+02 0.0069 29.3 10.2 113 96-208 187-318 (513)
96 KOG2195 Transferrin receptor a 34.1 97 0.0021 34.6 6.6 68 142-225 339-420 (702)
97 PRK09864 putative peptidase; P 33.9 94 0.002 31.8 6.0 77 380-466 262-341 (356)
98 PF13153 DUF3985: Protein of u 32.1 41 0.00088 22.4 2.0 21 7-27 21-41 (44)
99 PF13755 Sensor_TM1: Sensor N- 22.6 49 0.0011 25.9 1.3 25 5-29 11-35 (79)
100 PF03755 YicC_N: YicC-like fam 21.3 4.6E+02 0.01 23.2 7.6 63 329-395 31-94 (159)
101 PRK00423 tfb transcription ini 20.5 4.8E+02 0.01 26.0 8.3 32 32-63 48-81 (310)
102 cd06406 PB1_P67 A PB1 domain i 20.5 4.3E+02 0.0093 20.8 6.4 58 326-388 8-65 (80)
No 1
>PLN02280 IAA-amino acid hydrolase
Probab=100.00 E-value=1.3e-61 Score=507.44 Aligned_cols=408 Identities=82% Similarity=1.298 Sum_probs=349.6
Q ss_pred ccccCCCC-CCC-CCccccchhhHHHHHHHhcCcchHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEeccC
Q 011730 63 KNRSSTSR-KPY-SSCEVWSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLA 140 (478)
Q Consensus 63 ~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~ 140 (478)
+||+.+-. +++ .+|++|+..|+++++....+++..++|++++++++++||++++|.++++||.++|+++||++++..+
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~r~lh~~PEls~~E~~t~~~i~~~L~~~G~~~~~~~~ 139 (478)
T PLN02280 60 KNQSSGLPAKPSSDECEVWTKACSEAVLRLAYQPDTVAWLKSVRRKIHENPELAFEEYKTSELVRSELDRMGIMYRYPLA 139 (478)
T ss_pred ccccCCCCCCCCCchhhHhhhhhhHHHHHhhhhHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCeEEecCC
Confidence 33444333 344 6999999999998877765578889999999999999999999999999999999999999877666
Q ss_pred CceEEEEEcCCCCcEEEEEEccccccCCCCCCCCcccccCCeEEeCcchHHHHHHHHHHHHHHhcCCCCC--------CC
Q 011730 141 KTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLK--------PA 212 (478)
Q Consensus 141 ~~~via~~g~~~~p~v~~~aHlDvVP~~~~~~~Pf~~~~~G~~~g~G~dg~~a~~l~aa~~L~~~~~~l~--------~d 212 (478)
++|+++++|++++|+|+|+|||||||+++...|+|.+.++|++||||||+++|++++++++|++.+.+++ +|
T Consensus 140 ~~~vva~~g~~~~~~I~l~gh~DaVP~~e~~~w~~~p~~~G~~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~~if~pd 219 (478)
T PLN02280 140 KTGIRAWIGTGGPPFVAVRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQPA 219 (478)
T ss_pred CCEEEEEECCCCCCEEEEEEecCCCcccCCCCCCCCCCCCCeEEeCCCcHHHHHHHHHHHHHHhccccCCceEEEEeccc
Confidence 7899999965445899999999999998877899998889999999999999999999999987654332 99
Q ss_pred ccCCCcHHHHHHcCCCCCCcEEEEEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHH
Q 011730 213 EEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVIS 292 (478)
Q Consensus 213 EE~g~G~~~l~~~g~~~~~D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~ 292 (478)
||.+.|++.|+++|.+++.|++++.|+.+..|.+.++...+...+|..+++|+++|+++|+|.|+.|+|||..|++++..
T Consensus 220 EE~g~Ga~~li~~g~~~~~d~~~~~h~~~~~p~g~ig~~~~~~~~G~~~~~I~v~Gk~aHas~P~~G~NAI~~aa~li~~ 299 (478)
T PLN02280 220 EEAGNGAKRMIGDGALDDVEAIFAVHVSHEHPTAVIGSRPGPLLAGCGFFRAVISGKKGRAGSPHHSVDLILAASAAVIS 299 (478)
T ss_pred ccccchHHHHHHCCCCcCCCEEEEEecCCCCCCceeEecccccccceeEEEEEEECcchhcCCcccCcCHHHHHHHHHHH
Confidence 99888999999999988899999999876667777766667677789999999999999999999999999999999999
Q ss_pred HHhhhhcccCCCCCcEEEEEEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCC
Q 011730 293 LQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGN 372 (478)
Q Consensus 293 l~~l~~~~~~~~~~~~~~v~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~ 372 (478)
++.+..+...+....+++++.|+||.+.|+||++|++.+++|+++.++.+++.++|+++++..+..+++++++++.....
T Consensus 300 l~~l~~r~~~~~~~~tvnvg~I~GG~~~NvIPd~~~l~~diR~~~~e~~e~l~~~I~~~~~~~a~~~g~~~~v~~~~~~~ 379 (478)
T PLN02280 300 LQGIVSREANPLDSQVVSVTTMDGGNNLDMIPDTVVLGGTFRAFSNTSFYQLLKRIQEVIVEQAGVFRCSATVDFFEKQN 379 (478)
T ss_pred HHHHHhcccCCCCCcEEEEEEEEccCCCCEeCCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccc
Confidence 99886555555566789999999999999999999999999999999999999999999999888888888877632112
Q ss_pred CCCCCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHhcccceEEecccCCCCCCCCCCCCCCcccCcCch
Q 011730 373 TVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVL 452 (478)
Q Consensus 373 ~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l 452 (478)
..++++.+++++++.+++++.+.+|.+......+.++++|+++|...+|++++++|+++.++|....+|+++|++++++|
T Consensus 380 ~~~pp~~n~~~l~~~~~~~a~~~~G~~~~~~~~~~~g~tD~~~~~~~vP~i~~glG~~~~~~G~~~~~Htp~e~id~~~L 459 (478)
T PLN02280 380 TIYPPTVNNDAMYEHVRKVAIDLLGPANFTVVPPMMGAEDFSFYSQVVPAAFYYIGIRNETLGSTHTGHSPYFMIDEDVL 459 (478)
T ss_pred CCCCCccCCHHHHHHHHHHHHHhcCccccccCCCCeeechHHHHHhhCCEEEEEEeecCCCCCCCCCCCCCCCcCCHHHH
Confidence 45788889999999999998887776532222456889999999988999998889876543444579999999999999
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 011730 453 PVGAAVHATIAERFLNEY 470 (478)
Q Consensus 453 ~~~~~i~a~~~~~ll~~~ 470 (478)
..++++|+.++.+++..+
T Consensus 460 ~~~~~~~~~~~~~~l~~~ 477 (478)
T PLN02280 460 PIGAAVHAAIAERYLIEH 477 (478)
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 999999999999998753
No 2
>PLN02693 IAA-amino acid hydrolase
Probab=100.00 E-value=1e-56 Score=467.44 Aligned_cols=371 Identities=57% Similarity=0.963 Sum_probs=321.2
Q ss_pred hHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEeccCCceEEEEEcCCCCcEEEEEEccccccCCCCCCCCc
Q 011730 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEY 175 (478)
Q Consensus 96 ~~~~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~g~~~~p~v~~~aHlDvVP~~~~~~~Pf 175 (478)
..+++++++++||++||+|++|.+++++|.++|+++||+++...+++||+++++++++|+|+|+|||||||.++.+.|+|
T Consensus 45 ~~~~~~~~r~~lh~~PE~s~~E~~ta~~i~~~L~~~G~~~~~~~~~~~via~~g~~~g~~i~l~~h~DaVp~~e~~~~~~ 124 (437)
T PLN02693 45 VFDWMVRIRRKIHENPELGYEEFETSKLIRSELDLIGIKYRYPVAITGIIGYIGTGEPPFVALRADMDALPIQEAVEWEH 124 (437)
T ss_pred hHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHCCCeeEecCCCcEEEEEECCCCCCEEEEEeecCCCcCCCCCCCCC
Confidence 56789999999999999999999999999999999999977544678999999655579999999999999988777888
Q ss_pred ccccCCeEEeCcchHHHHHHHHHHHHHHhcCCCCC--------CCccCCCcHHHHHHcCCCCCCcEEEEEecCCCCCcce
Q 011730 176 KSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLK--------PAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGV 247 (478)
Q Consensus 176 ~~~~~G~~~g~G~dg~~a~~l~aa~~L~~~~~~l~--------~dEE~g~G~~~l~~~g~~~~~D~~i~~~~~~~~~~g~ 247 (478)
.+..+|++||||||+++|++++|+++|++.+..++ +|||.+.|++.|+++|.+++.|+++..|..+..+.|.
T Consensus 125 ~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE~~~Ga~~~i~~g~~~~~~~iig~h~~p~~~~g~ 204 (437)
T PLN02693 125 KSKIPGKMHACGHDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSPRTPFGK 204 (437)
T ss_pred CCCCCCCEECCcchHHHHHHHHHHHHHHhCcccCCceEEEEEEEcccchhhHHHHHHCCCCCCCCEEEEEecCCCCCCee
Confidence 88888999999999999999999999988654332 9999667999999999887778888888776667787
Q ss_pred EEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhcccCCCCCcEEEEEEEeCCCccceecCcE
Q 011730 248 IGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAV 327 (478)
Q Consensus 248 i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~v~~i~gG~~~NvIP~~a 327 (478)
+..+.|..++|..+++|+++|+++|+|.|+.|+|||..+++++..|+++..+...++...++++|.|+||.+.|+||++|
T Consensus 205 ~~~~~g~~~~G~~~~~i~v~Gk~aHaa~P~~G~nAI~~aa~~i~~l~~~~~~~~~~~~~~ti~vg~i~GG~~~NvVPd~a 284 (437)
T PLN02693 205 AASRAGSFMAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNGGNAFNVIPDSI 284 (437)
T ss_pred EEeccCcccccceEEEEEEEcccccCCCCCCCcCHHHHHHHHHHHHHHHhcccCCCCCCcEEEEEEEEcCCCCceECCeE
Confidence 77777877888999999999999999999999999999999999999986555556677899999999999999999999
Q ss_pred EEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCcccccCCC
Q 011730 328 VIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPM 407 (478)
Q Consensus 328 ~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~ 407 (478)
++.+++|+.+.. +.+.++|+++++..+..+++++++++....++.++++.+|+++++.+++++++.+|.++.....+.
T Consensus 285 ~~~~diR~~~~~--~~i~~~i~~i~~~~a~~~g~~~e~~~~~~~~~~~~~~~nd~~l~~~~~~~~~~~~G~~~~~~~~~~ 362 (437)
T PLN02693 285 TIGGTLRAFTGF--TQLQQRIKEIITKQAAVHRCNASVNLTPNGREPMPPTVNNMDLYKQFKKVVRDLLGQEAFVEAAPE 362 (437)
T ss_pred EEEEEEecCCHH--HHHHHHHHHHHHHHHHHhCCcEEEEEeecCccCCCCccCCHHHHHHHHHHHHHhcCCcceeecCCC
Confidence 999999999974 589999999999988788888888764322245677888999999999999998887653223456
Q ss_pred CccchHHHHHHhcccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHHhh
Q 011730 408 MGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 469 (478)
Q Consensus 408 ~g~tD~~~~~~~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll~~ 469 (478)
++++|+++|++.+|++++++|++++..+ ....|+|+|+++.+.|..++++|+.++.++|+.
T Consensus 363 ~gseDf~~~~~~vP~~~~~lG~~~~~~~-~~~~H~~~f~~de~~l~~~~~~~~~~~~~~l~~ 423 (437)
T PLN02693 363 MGSEDFSYFAETIPGHFSLLGMQDETNG-YASSHSPLYRINEDVLPYGAAIHATMAVQYLKE 423 (437)
T ss_pred ceechHHHHHHHhhhhEEEEecCCCCCC-CCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 7999999999999999999998853211 146999999999999999999999999999886
No 3
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=100.00 E-value=5.2e-57 Score=456.53 Aligned_cols=370 Identities=39% Similarity=0.625 Sum_probs=335.6
Q ss_pred chHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEecc-CCceEEEEEcCC-CCcEEEEEEccccccCCCCCC
Q 011730 95 ETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL-AKTGIRAWVGTG-GPPFVALRADMDALPIQEAVE 172 (478)
Q Consensus 95 ~~~~~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~-~~~~via~~g~~-~~p~v~~~aHlDvVP~~~~~~ 172 (478)
..+++|++|+|+||++||++++|+++++||.++|+++||++.... .+++++++++++ ++|+|+|++.||++|..+.+.
T Consensus 9 ~~~~~l~~~rr~lH~~PEL~f~E~~Ta~~i~~~L~~~g~~~~~~~~~~TGvva~~~~g~~g~tIalRAD~DALPi~E~t~ 88 (392)
T COG1473 9 ELKDELIEWRRDLHEHPELGFEEYRTAAYIAEKLEELGFEVVEVGGGKTGVVATLKGGKPGPTIALRADMDALPIQEETG 88 (392)
T ss_pred hhhHHHHHHHHHHhhCCccchhHHHHHHHHHHHHHHcCCeeEeccCCceEEEEEEcCCCCCCEEEEEeecccCccccccC
Confidence 458899999999999999999999999999999999999944444 379999999754 568999999999999999999
Q ss_pred CCcccccCCeEEeCcchHHHHHHHHHHHHHHhcCCCCC--------CCccCCCcHHHHHHcCCCCC-CcEEEEEecCCCC
Q 011730 173 WEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLK--------PAEEAGNGAKRMMADGALED-VEAIFAVHVSHEH 243 (478)
Q Consensus 173 ~Pf~~~~~G~~~g~G~dg~~a~~l~aa~~L~~~~~~l~--------~dEE~g~G~~~l~~~g~~~~-~D~~i~~~~~~~~ 243 (478)
.||++..+|++|+||||++++++|+++++|++.+.+++ |+||+++|++.|+++|.+++ +|+++.+|+.++.
T Consensus 89 ~~~~S~~~G~mHACGHD~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~~~Ga~~mi~~G~~~~~vD~v~g~H~~p~~ 168 (392)
T COG1473 89 LPFASKNPGVMHACGHDGHTAILLGAALALAEHKDNLPGTVRLIFQPAEEGGGGAKAMIEDGVFDDFVDAVFGLHPGPGL 168 (392)
T ss_pred CCcccCCCCCcccCCchHHHHHHHHHHHHHHhhhhhCCcEEEEEecccccccccHHHHHhcCCccccccEEEEecCCCCC
Confidence 99999999999999999999999999999998754433 99999889999999999999 9999999998877
Q ss_pred CcceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhcccCCCCCcEEEEEEEeCCCcccee
Q 011730 244 PTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMI 323 (478)
Q Consensus 244 ~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~v~~i~gG~~~NvI 323 (478)
|.|++.++.|...++...++++++|+++|++.||.++||+.+++.++..|+.+.++..+|....+++++.++||.+.|||
T Consensus 169 ~~g~v~~~~G~~~aa~d~~~i~~~GkggH~a~Ph~~~d~i~aa~~~v~~lq~ivsr~~~p~~~~vv~vg~~~aG~a~NVI 248 (392)
T COG1473 169 PVGTVALRPGALMAAADEFEITFKGKGGHAAAPHLGIDALVAAAQLVTALQTIVSRNVDPLDSAVVTVGKIEAGTAANVI 248 (392)
T ss_pred CCceEEeecccceeecceEEEEEEeCCcccCCcccccCHHHHHHHHHHHHHHHHhcccCCccCeEEEEEEecCCCcCCcC
Confidence 88999999998888899999999999999999999999999999999999999999888888899999999999999999
Q ss_pred cCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCccc-
Q 011730 324 PDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYR- 402 (478)
Q Consensus 324 P~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~- 402 (478)
|+++++.+++|....+..+.+.++|+++++..+..+||++|+.+. ..||++.||+.+.+.+++++++..|.....
T Consensus 249 pd~A~l~gtvR~~~~~~~~~~~~~i~~ia~g~a~~~g~~~ei~~~----~~~p~~~Nd~~~~~~~~~~~~~~~~~~~~~~ 324 (392)
T COG1473 249 PDSAELEGTIRTFSDEVREKLEARIERIAKGIAAAYGAEAEIDYE----RGYPPVVNDPALTDLLAEAAEEVGGEEVVVV 324 (392)
T ss_pred CCeeEEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEec----CCCCCccCCHHHHHHHHHHHHHhccccceec
Confidence 999999999999999999999999999999999999999999987 578999999999999999999987754322
Q ss_pred -ccCCCCccchHHHHHHhcccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHHhh
Q 011730 403 -VVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 469 (478)
Q Consensus 403 -~~~~~~g~tD~~~~~~~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll~~ 469 (478)
....+++++||++|++.+|.+++++|.++... .....|+|.+.++.+.+..++++++.++.+++..
T Consensus 325 ~~~~~~~gsEDf~~~~~~~Pg~~~~lG~~~~~~-~~~~~H~p~~~~de~~l~~g~~~~~~~~~~~~~~ 391 (392)
T COG1473 325 ELPPSMAGSEDFGYYLEKVPGAFFFLGTGSADG-GTYPLHHPKFDFDEAALATGVKLLAALALLYLAK 391 (392)
T ss_pred ccCCCCCccchHHHHHHhCCeeEEEeecCcCCC-CcccccCCcCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 22345699999999999999999999876531 1235999999999999999999999999988753
No 4
>PRK06915 acetylornithine deacetylase; Validated
Probab=100.00 E-value=6.3e-50 Score=416.99 Aligned_cols=367 Identities=16% Similarity=0.213 Sum_probs=295.9
Q ss_pred hhhHHHHHHHhcCcchHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEec--------------------cC
Q 011730 81 RACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYP--------------------LA 140 (478)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~--------------------~~ 140 (478)
.+.+++|.+++ ++..+++++++++|++|||+|++|.++++||.++|+++||+++.. ..
T Consensus 2 ~~~~~~~~~~~--~~~~~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (422)
T PRK06915 2 EQLKKQICDYI--ESHEEEAVKLLKRLIQEKSVSGDESGAQAIVIEKLRELGLDLDIWEPSFKKLKDHPYFVSPRTSFSD 79 (422)
T ss_pred cHHHHHHHHHH--HhhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCeeEEeecchhhhhcccccCCcccccCC
Confidence 45688999999 999999999999999999999999999999999999999997532 14
Q ss_pred CceEEEEEcC-CCCcEEEEEEccccccCCC---CCCCCcccc-cCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC--
Q 011730 141 KTGIRAWVGT-GGPPFVALRADMDALPIQE---AVEWEYKSK-VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLK-- 210 (478)
Q Consensus 141 ~~~via~~g~-~~~p~v~~~aHlDvVP~~~---~~~~Pf~~~-~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~-- 210 (478)
++|+++++++ +++|+|+|++||||||+++ |+.+||.+. ++|++||||+ | ++++++|.|++.|++.+.+++
T Consensus 80 ~~nlia~~~g~~~~~~l~l~~H~Dtvp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~ 159 (422)
T PRK06915 80 SPNIVATLKGSGGGKSMILNGHIDVVPEGDVNQWDHHPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGIELKGD 159 (422)
T ss_pred CceEEEEEcCCCCCCeEEEEeeccccCCCCcccCcCCCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCc
Confidence 6899999943 4568999999999999865 455699986 5899999999 5 666677888999988764432
Q ss_pred ------CCccCC-CcHHHHHHcCCCCCCcEEEEEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHH
Q 011730 211 ------PAEEAG-NGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPV 283 (478)
Q Consensus 211 ------~dEE~g-~G~~~l~~~g~~~~~D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi 283 (478)
+|||.+ .|+..++.+++ +.|++|+.+|+.. .+. ..++|..+++|+++|+++|+|.|+.|.||+
T Consensus 160 v~~~~~~dEE~g~~G~~~~~~~~~--~~d~~i~~ep~~~----~i~----~~~~G~~~~~i~v~G~~~H~s~p~~g~nAi 229 (422)
T PRK06915 160 VIFQSVIEEESGGAGTLAAILRGY--KADGAIIPEPTNM----KFF----PKQQGSMWFRLHVKGKAAHGGTRYEGVSAI 229 (422)
T ss_pred EEEEEecccccCCcchHHHHhcCc--CCCEEEECCCCCc----cce----eecccEEEEEEEEEeeccccCCCCcCcCHH
Confidence 899976 48888888774 5899999887542 121 123478999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhc----ccCCC-----CCcEEEEEEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHH
Q 011730 284 LAASAAVISLQGLVSR----EANPL-----DSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVE 354 (478)
Q Consensus 284 ~~~~~~i~~l~~l~~~----~~~~~-----~~~~~~v~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~ 354 (478)
..+++++..|+.+... ...++ .+.+++++.|+||...|+||++|++.+++|+.|.++.+++.+.|++.+++
T Consensus 230 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~a~~~~d~R~~p~~~~~~v~~~i~~~l~~ 309 (422)
T PRK06915 230 EKSMFVIDHLRKLEEKRNDRITDPLYKGIPIPIPINIGKIEGGSWPSSVPDSVILEGRCGIAPNETIEAAKEEFENWIAE 309 (422)
T ss_pred HHHHHHHHHHHHHHHHhccccCCCcccCCCCCceEeEEEeeCCCCCCccCcEEEEEEEEEECCCCCHHHHHHHHHHHHHH
Confidence 9999999999887431 11221 14589999999999999999999999999999999999999999999988
Q ss_pred HHhhc----CCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHh--cccceEEec
Q 011730 355 QARVF----RCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV--VPAAFYYIG 428 (478)
Q Consensus 355 ~~~~~----g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~--iP~~~~~~G 428 (478)
.+... +..+++++.... .....+..|+++++.+++++++++|.++. ....++++|+++|... +|+++ +|
T Consensus 310 ~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~d~~lv~~l~~a~~~~~G~~~~--~~~~~g~tD~~~~~~~~giP~v~--fG 384 (422)
T PRK06915 310 LNDVDEWFVEHPVEVEWFGAR-WVPGELEENHPLMTTLEHNFVEIEGNKPI--IEASPWGTDGGLLTQIAGVPTIV--FG 384 (422)
T ss_pred HhccChhhhcCCceEEeeccc-CCcccCCCCCHHHHHHHHHHHHHhCCCCe--eceeeeeccHHHHhccCCCCEEE--EC
Confidence 76532 234555543211 11124556889999999999998887653 3456789999999874 99965 45
Q ss_pred ccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHHhh
Q 011730 429 IKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 469 (478)
Q Consensus 429 ~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll~~ 469 (478)
++.. ..+|++||+++++++.+++++|+.++.++|.-
T Consensus 385 pg~~-----~~aH~~dE~v~~~~l~~~~~~~~~ll~~~~~~ 420 (422)
T PRK06915 385 PGET-----KVAHYPNEYIEVDKMIAAAKIIALTLLDWCEV 420 (422)
T ss_pred CCCc-----cccCCCCceeEHHHHHHHHHHHHHHHHHHhCC
Confidence 5432 46999999999999999999999999999864
No 5
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=100.00 E-value=4.7e-49 Score=402.50 Aligned_cols=349 Identities=41% Similarity=0.693 Sum_probs=290.4
Q ss_pred HHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEe-ccCCceEEEEEcCC-CCcEEEEEEccccccCCCCCCCCcccc
Q 011730 101 KSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKY-PLAKTGIRAWVGTG-GPPFVALRADMDALPIQEAVEWEYKSK 178 (478)
Q Consensus 101 ~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~-~~~~~~via~~g~~-~~p~v~~~aHlDvVP~~~~~~~Pf~~~ 178 (478)
++++++|++|||+|++|.++++||.++|+++||++++ .....|++++++++ ++|+|+|+|||||||++++..+||...
T Consensus 2 ~~~~~~L~~ips~s~~E~~~a~~l~~~l~~~g~~~~~~~~~~~~vva~~~~~~~~~~i~l~gH~DtVp~~~~~~~pf~~~ 81 (363)
T TIGR01891 2 TDIRRHLHEHPELSFEEFKTSSLIAEALESLGIEVRRGVGGATGVVATIGGGKPGPVVALRADMDALPIQEQTDLPYKST 81 (363)
T ss_pred hHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCceEecCCCCcEEEEEEeCCCCCCEEEEEeccCCCCcccccCCCcccC
Confidence 5789999999999999999999999999999999876 34567899999653 468999999999999888777999987
Q ss_pred cCCeEEeCcchHHHHHHHHHHHHHHhcCCCCC--------CCccCCCcHHHHHHcCCCCCCcEEEEEecCCCCCcceEEe
Q 011730 179 VAGKMHACGHDAHVAMLIGAAKILKSREHLLK--------PAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGS 250 (478)
Q Consensus 179 ~~G~~~g~G~dg~~a~~l~aa~~L~~~~~~l~--------~dEE~g~G~~~l~~~g~~~~~D~~i~~~~~~~~~~g~i~~ 250 (478)
++|++||||+++.++++++|+..|++.+..+. +|||.+.|++.+++++.+++.|++|+.||++..+.+.+..
T Consensus 82 ~~g~l~g~G~~~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~G~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~~~ 161 (363)
T TIGR01891 82 NPGVMHACGHDLHTAILLGTAKLLKKLADLLEGTVRLIFQPAEEGGGGATKMIEDGVLDDVDAILGLHPDPSIPAGTVGL 161 (363)
T ss_pred CCCceecCcCHHHHHHHHHHHHHHHhchhhCCceEEEEEeecCcCcchHHHHHHCCCCCCcCEEEEECCCCCCCCeEEEE
Confidence 78999999999888889999888887543221 9999878999999988777889999999876666666555
Q ss_pred ecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhcccCCCCCcEEEEEEEeCCCccceecCcEEEE
Q 011730 251 RPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIG 330 (478)
Q Consensus 251 ~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~v~~i~gG~~~NvIP~~a~~~ 330 (478)
..+..++|..+++++++|+++|++.|+.|+||+..|++++.+++++......+....+++++.|+||.+.|+||++|++.
T Consensus 162 ~~~~~~~g~~~~~i~~~G~~~Has~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~nvvP~~~~~~ 241 (363)
T TIGR01891 162 RPGTIMAAADKFEVTIHGKGAHAARPHLGRDALDAAAQLVVALQQIVSRNVDPSRPAVVTVGIIEAGGAPNVIPDKASMS 241 (363)
T ss_pred CCCcceeecceEEEEEEeecccccCcccccCHHHHHHHHHHHHHHHhhccCCCCCCcEEEEEEEEcCCCCcEECCeeEEE
Confidence 55666678889999999999999989999999999999999998864332223345689999999999999999999999
Q ss_pred EEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCccc-ccCCCCc
Q 011730 331 GTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYR-VVPPMMG 409 (478)
Q Consensus 331 ~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~-~~~~~~g 409 (478)
+|+|+.|.++.+++.+.|++++++.+...++++++++.. .+++...++++++.+++++++.+|..+.. .+..++|
T Consensus 242 ~diR~~~~~~~e~~~~~i~~~~~~~~~~~~~~ve~~~~~----~~p~~~~~~~l~~~l~~a~~~~~g~~~~~~~~~~~~g 317 (363)
T TIGR01891 242 GTVRSLDPEVRDQIIDRIERIVEGAAAMYGAKVELNYDR----GLPAVTNDPALTQILKEVARHVVGPENVAEDPEVTMG 317 (363)
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEec----CCCCccCCHHHHHHHHHHHHHhcCccceeccCCCCcc
Confidence 999999999999999999999999887778888887653 34445568899999999999987854321 1245789
Q ss_pred cchHHHHHHhcccceEEecccCCCCCCCCCCCCCCcccCcCchH
Q 011730 410 AEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLP 453 (478)
Q Consensus 410 ~tD~~~~~~~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~ 453 (478)
++|+++|++.+|++++|++..+.+.+.....|++++..+.+.|.
T Consensus 318 g~Da~~~~~~~P~~~~f~~~~~~~~~~~~~~h~~~~~~~~~~~~ 361 (363)
T TIGR01891 318 SEDFAYYSQKVPGAFFFLGIGNEGTGLSHPLHHPRFDIDEEALA 361 (363)
T ss_pred ccCHHHHHHhCCeeEEEEecCCCCCCCCCCCCCCCCcCChHHhc
Confidence 99999999999999999988753211124699999998877653
No 6
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.2e-48 Score=401.46 Aligned_cols=349 Identities=21% Similarity=0.250 Sum_probs=286.1
Q ss_pred HHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEec---cCCceEEEEEcCCCCcEEEEEEccccccCCC---CC
Q 011730 98 DWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYP---LAKTGIRAWVGTGGPPFVALRADMDALPIQE---AV 171 (478)
Q Consensus 98 ~~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~---~~~~~via~~g~~~~p~v~~~aHlDvVP~~~---~~ 171 (478)
++.++++++|++|||+|++|.++++||.++|+++||+++.. .+++|++++++++ .|+|+|++||||||+++ |+
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~g~~-~~~il~~~H~DtVp~~~~~~w~ 80 (377)
T PRK08588 2 EEKIQILADIVKINSVNDNEIEVANYLQDLFAKHGIESKIVKVNDGRANLVAEIGSG-SPVLALSGHMDVVAAGDVDKWT 80 (377)
T ss_pred hHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCceEEEecCCCCceEEEEeCCC-CceEEEEeeecccCCCCcccCc
Confidence 56789999999999999999999999999999999997653 3468999999654 48999999999999864 45
Q ss_pred CCCcccc-cCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC--------CCccCC-CcHHHHHHcCCCCCCcEEEEEe
Q 011730 172 EWEYKSK-VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLK--------PAEEAG-NGAKRMMADGALEDVEAIFAVH 238 (478)
Q Consensus 172 ~~Pf~~~-~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~--------~dEE~g-~G~~~l~~~g~~~~~D~~i~~~ 238 (478)
.+||... ++|++||||+ | +++++++.|++.|++.+..++ +|||.+ .|++.+++++.+.++|++++.+
T Consensus 81 ~~Pf~~~~~~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~l~~~~dEE~g~~G~~~~~~~~~~~~~d~~i~~e 160 (377)
T PRK08588 81 YDPFELTEKDGKLYGRGATDMKSGLAALVIAMIELKEQGQLLNGTIRLLATAGEEVGELGAKQLTEKGYADDLDALIIGE 160 (377)
T ss_pred CCCCCeEEECCEEEecCcccccchHHHHHHHHHHHHHcCCCCCCcEEEEEEcccccCchhHHHHHhcCccCCCCEEEEec
Confidence 6699864 6899999998 4 778888888888888764432 999976 5999999998887889999988
Q ss_pred cCCCCCcceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhcc---cCCCCCcEEEEEEEe
Q 011730 239 VSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSRE---ANPLDSQVVSVTYFN 315 (478)
Q Consensus 239 ~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~~---~~~~~~~~~~v~~i~ 315 (478)
|+.. .+. .+ .+|..+++|+++|+++|+|.|+.|.|||..+++++..++.+..+. ...++..+++++.|+
T Consensus 161 p~~~----~i~--~~--~~G~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~t~~v~~i~ 232 (377)
T PRK08588 161 PSGH----GIV--YA--HKGSMDYKVTSTGKAAHSSMPELGVNAIDPLLEFYNEQKEYFDSIKKHNPYLGGLTHVVTIIN 232 (377)
T ss_pred CCCc----eeE--EE--EEEEEEEEEEEEeechhccCCccccCHHHHHHHHHHHHHHHhhhhcccCccCCCCceeeeEEe
Confidence 7531 222 12 247889999999999999999999999999999999998764322 122456889999999
Q ss_pred CCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCc--cCCHHHHHHHHHHHH
Q 011730 316 GGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPT--VNDEDMYEHVKKVAI 393 (478)
Q Consensus 316 gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~--~~d~~l~~~~~~~~~ 393 (478)
||...|+||++|++.+|+|+.|.++.+++.+.|++++++.+...++++++++.. .++++ ..++++++.++++++
T Consensus 233 gG~~~nvip~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~----~~~p~~~~~~~~l~~~~~~~~~ 308 (377)
T PRK08588 233 GGEQVNSVPDEAELEFNIRTIPEYDNDQVISLLQEIINEVNQNGAAQLSLDIYS----NHRPVASDKDSKLVQLAKDVAK 308 (377)
T ss_pred CCCcCCcCCCeEEEEEEeccCCCCCHHHHHHHHHHHHHHHhhccCCceEEEEec----CCCCcCCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998776556777777653 23333 346799999999999
Q ss_pred HhcCCCcccccCCCCccchHHHHHHh---cccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHHh
Q 011730 394 DLLGPMNYRVVPPMMGAEDFSFYSEV---VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 468 (478)
Q Consensus 394 ~~~G~~~~~~~~~~~g~tD~~~~~~~---iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll~ 468 (478)
+.+|..+. ....+|++|+++|... +|++ .+|++.. .++|++||+++++++.+++++|.+++.++|+
T Consensus 309 ~~~g~~~~--~~~~~g~tD~~~~~~~~~~ip~i--~~Gpg~~-----~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~ 377 (377)
T PRK08588 309 SYVGQDIP--LSAIPGATDASSFLKKKPDFPVI--IFGPGNN-----LTAHQVDEYVEKDMYLKFIDIYKEIIIQYLK 377 (377)
T ss_pred HhhCCCCc--eecCCCcccHHHHhhhcCCCCEE--EECCCCC-----ccCCCCCceeEHHHHHHHHHHHHHHHHHHhC
Confidence 98887542 3567889999999754 4444 4566532 4699999999999999999999999998873
No 7
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=3.6e-47 Score=396.83 Aligned_cols=362 Identities=15% Similarity=0.122 Sum_probs=286.4
Q ss_pred HHHHHhcCcchHHHHHHHHHHhhcCCCCC--c-chHHHHHHHHHHHHhCCCcEEecc-----C------CceEEEEEcC-
Q 011730 86 EVMELARRPETVDWLKSVRRTIHQNPELA--F-QEFETSRLLRAELDRMEIGYKYPL-----A------KTGIRAWVGT- 150 (478)
Q Consensus 86 ~~~~~~~~~~~~~~l~~l~~~L~~iPs~s--~-~E~~~a~~l~~~L~~~G~~v~~~~-----~------~~~via~~g~- 150 (478)
++.+++ +++.+++++++++|++|||++ + +|.++++||.++|+++||+++... . ++|+++++++
T Consensus 4 ~~~~~~--~~~~~~~~~~l~~Lv~i~S~~~~g~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~nlia~~~g~ 81 (427)
T PRK13013 4 RLFAAI--EARRDDLVALTQDLIRIPTLNPPGRAYREICEFLAARLAPRGFEVELIRAEGAPGDSETYPRWNLVARRQGA 81 (427)
T ss_pred HHHHHH--HHhHHHHHHHHHHHhcCCCcCCCCccHHHHHHHHHHHHHHCCCceEEEecCCCCcccccCCcceEEEEecCC
Confidence 467777 788899999999999999987 3 568999999999999999986532 1 4699999943
Q ss_pred CCCcEEEEEEccccccCCC-CCCCCcccc-cCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC--------CCccCC-
Q 011730 151 GGPPFVALRADMDALPIQE-AVEWEYKSK-VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLK--------PAEEAG- 216 (478)
Q Consensus 151 ~~~p~v~~~aHlDvVP~~~-~~~~Pf~~~-~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~--------~dEE~g- 216 (478)
+++|+|+|++||||||+++ |+.+||++. ++|++||||. | ++++++|.|++.|++.+..++ +|||.+
T Consensus 82 ~~~~~i~l~gH~DvVp~~~~W~~~Pf~~~~~dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~ 161 (427)
T PRK13013 82 RDGDCVHFNSHHDVVEVGHGWTRDPFGGEVKDGRIYGRGACDMKGGLAASIIAAEAFLAVYPDFAGSIEISGTADEESGG 161 (427)
T ss_pred CCCCEEEEEeccccCCCCCCCcCCCCCceEECCEEEeccccccchHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccCC
Confidence 3468999999999999864 578899975 5899999997 3 899999999999998654332 999976
Q ss_pred -CcHHHHHHcCCCC--CCcEEEEEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHH
Q 011730 217 -NGAKRMMADGALE--DVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISL 293 (478)
Q Consensus 217 -~G~~~l~~~g~~~--~~D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l 293 (478)
+|..++++.+.+. ++|++|+.+|+.. ..+. .+ ++|..+++|+++|+++|++.|+.|+|||..|+++|.+|
T Consensus 162 ~~g~~~l~~~~~~~~~~~d~~i~~ep~~~---~~i~--~~--~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~l~~l 234 (427)
T PRK13013 162 FGGVAYLAEQGRFSPDRVQHVIIPEPLNK---DRIC--LG--HRGVWWAEVETRGRIAHGSMPFLGDSAIRHMGAVLAEI 234 (427)
T ss_pred hhHHHHHHhcCCccccCCCEEEEecCCCC---CceE--Ee--eeeEEEEEEEEEccccccCCCCcCcCHHHHHHHHHHHH
Confidence 4788888888765 5699999887642 1122 22 24788999999999999999999999999999999999
Q ss_pred Hhhhhcc-----c-CC-----CCCcEEEEEEEeCCCcc----------ceecCcEEEEEEEeccChHhHHHHHHHHHHHH
Q 011730 294 QGLVSRE-----A-NP-----LDSQVVSVTYFNGGDHL----------DMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVI 352 (478)
Q Consensus 294 ~~l~~~~-----~-~~-----~~~~~~~v~~i~gG~~~----------NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~ 352 (478)
+.+..+. . .+ ....+++++.|+||... |+||++|++.+|+|+.|.++.+++.++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~~~~~~~~~~~n~IPd~a~~~idiR~~p~~~~~~v~~~i~~~i 314 (427)
T PRK13013 235 EERLFPLLATRRTAMPVVPEGARQSTLNINSIHGGEPEQDPDYTGLPAPCVADRCRIVIDRRFLIEEDLDEVKAEITALL 314 (427)
T ss_pred HHHhhhhhhcccccCCCCCcccCCCceeeeEEeCCCccccccccccccccCCceEEEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 7653110 0 01 13578999999999766 99999999999999999999999999999999
Q ss_pred HHHHhhc-CCeeEEEEecCCCCCCCCc--cCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHh--cccceEEe
Q 011730 353 VEQARVF-RCSATVDFFDKGNTVYPPT--VNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV--VPAAFYYI 427 (478)
Q Consensus 353 ~~~~~~~-g~~~ev~~~~~~~~~~~~~--~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~--iP~~~~~~ 427 (478)
++.+... +++++++... .+++. ..++++++.+.+++++.+|.++. ...+++++|++++.+. +|.++ .+
T Consensus 315 ~~~~~~~~~~~~~~~~~~----~~~p~~~~~~~~lv~~l~~a~~~~~g~~~~--~~~~~g~~D~~~~~~~g~~~~~v-~f 387 (427)
T PRK13013 315 ERLKRARPGFAYEIRDLF----EVLPTMTDRDAPVVRSVAAAIERVLGRQAD--YVVSPGTYDQKHIDRIGKLKNCI-AY 387 (427)
T ss_pred HHHHhhCCCceeEEEEcc----cCCcccCCCCCHHHHHHHHHHHHhhCCCCc--eeecCccCCHHHHHhcCCCCCEE-EE
Confidence 9876533 4555654431 23333 34569999999999988887653 3456788999999875 34333 35
Q ss_pred cccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHHh
Q 011730 428 GIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 468 (478)
Q Consensus 428 G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll~ 468 (478)
|++.. ..+|++||++++++|.+++++|+.++.+|++
T Consensus 388 GPg~~-----~~aH~~nE~v~i~~l~~~~~~l~~~l~~~~~ 423 (427)
T PRK13013 388 GPGIL-----DLAHQPDEWVGIADMVDSAKVMALVLADLLA 423 (427)
T ss_pred CCCCc-----cccCCCCceeEHHHHHHHHHHHHHHHHHHhc
Confidence 66542 4699999999999999999999999999976
No 8
>PRK06837 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=2.3e-46 Score=390.55 Aligned_cols=368 Identities=14% Similarity=0.107 Sum_probs=294.0
Q ss_pred ccchhhHHHHHHHhcCcchHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEec-------------------
Q 011730 78 VWSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYP------------------- 138 (478)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~------------------- 138 (478)
|.+.++.+++.+++ +...+++++++++|++|||+|++|.++++||.++|+++|+++++.
T Consensus 2 ~~~~~~~~~~~~~i--~~~~~~~~~~l~~li~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (427)
T PRK06837 2 MLTPDLTQRILAAV--DAGFDAQVAFTQDLVRFPSTRGAEAPCQDFLARAFRERGYEVDRWSIDPDDLKSHPGAGPVEID 79 (427)
T ss_pred CCchHHHHHHHHHH--HhhhHHHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHCCCceEEecCCHHHhhhcccccccccc
Confidence 45667888999999 899999999999999999999999999999999999999987642
Q ss_pred -cCCceEEEEEcC-C-CCcEEEEEEccccccCC---CCCCCCcccc-cCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCC
Q 011730 139 -LAKTGIRAWVGT-G-GPPFVALRADMDALPIQ---EAVEWEYKSK-VAGKMHACGH-D--AHVAMLIGAAKILKSREHL 208 (478)
Q Consensus 139 -~~~~~via~~g~-~-~~p~v~~~aHlDvVP~~---~~~~~Pf~~~-~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~ 208 (478)
.+++|+++++++ + .+|+|+|+|||||||++ .|+.+||.+. ++|++||||+ | ++++++|.|++.+++.+..
T Consensus 80 ~~~~~nl~a~~~g~~~~~~~il~~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~~ 159 (427)
T PRK06837 80 YSGAPNVVGTYRPAGKTGRSLILQGHIDVVPEGPLDLWSRPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGLA 159 (427)
T ss_pred cCCCceEEEEecCCCCCCCeEEEEeecccCCCCCccccccCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCCC
Confidence 246799999953 3 36899999999999986 4678899986 5799999998 4 7788888888889876643
Q ss_pred CC--------CCccCC-CcHHHHHHcCCCCCCcEEEEEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCCCCCC
Q 011730 209 LK--------PAEEAG-NGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRS 279 (478)
Q Consensus 209 l~--------~dEE~g-~G~~~l~~~g~~~~~D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g 279 (478)
++ .+||.+ .|+..++..++ ..|++|+.+|+.. .+ ..|. .|..+++++++|+++|+|.|+.|
T Consensus 160 ~~~~i~~~~~~dEE~~g~g~~~~~~~~~--~~d~~iv~ep~~~----~i--~~~~--~G~~~~~i~v~G~~~Hs~~p~~g 229 (427)
T PRK06837 160 PAARVHFQSVIEEESTGNGALSTLQRGY--RADACLIPEPTGE----KL--VRAQ--VGVIWFRLRVRGAPVHVREAGTG 229 (427)
T ss_pred CCCcEEEEEEeccccCCHhHHHHHhcCc--CCCEEEEcCCCCC----cc--cccc--ceeEEEEEEEEeeccccCCcccC
Confidence 32 788865 58888877775 5799999887531 12 2232 47899999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhhhcc-----cCC-----CCCcEEEEEEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHH
Q 011730 280 VDPVLAASAAVISLQGLVSRE-----ANP-----LDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIE 349 (478)
Q Consensus 280 ~NAi~~~~~~i~~l~~l~~~~-----~~~-----~~~~~~~v~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~ 349 (478)
.||+..++++|..|+.+.... ..+ ..+.+++++.|+||...|+||++|++.+++|+.|.++.+++.++|+
T Consensus 230 ~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~t~ni~~i~gG~~~nvVP~~~~~~~~ir~~p~~~~~~v~~~i~ 309 (427)
T PRK06837 230 ANAIDAAYHLIQALRELEAEWNARKASDPHFEDVPHPINFNVGIIKGGDWASSVPAWCDLDCRIAIYPGVTAADAQAEIE 309 (427)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhhcccCCCcccCCCCceeEeeeeEeCCCCCCccCCEEEEEEEEeECCCCCHHHHHHHHH
Confidence 999999999999998764211 111 1245789999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhc----CCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHH--hcccc
Q 011730 350 EVIVEQARVF----RCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE--VVPAA 423 (478)
Q Consensus 350 ~~~~~~~~~~----g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~--~iP~~ 423 (478)
+++++.+... +..+++++.....++ ..+..++++++.+++++++.+|.+.. +..+++++|++++.. .+|++
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~a~~~~~g~~~~--~~~~~g~tDa~~~~~~~gip~v 386 (427)
T PRK06837 310 ACLAAAARDDRFLSNNPPEVVWSGFLAEG-YVLEPGSEAEAALARAHAAVFGGPLR--SFVTTAYTDTRFYGLYYGIPAL 386 (427)
T ss_pred HHHHHHHhcChhhhhCCCeEEEEecccCC-cCCCCCCHHHHHHHHHHHHHhCCCCe--eeEEeeccchHHHhccCCCCEE
Confidence 9998765432 223455443211111 23345679999999999998887542 356788999999974 58976
Q ss_pred eEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHHh
Q 011730 424 FYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 468 (478)
Q Consensus 424 ~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll~ 468 (478)
. +|++. ..+|++||+++++++.+++++|++++.++|.
T Consensus 387 ~--~Gp~~------~~~H~~nE~i~i~~l~~~~~~~~~~l~~~~~ 423 (427)
T PRK06837 387 C--YGPSG------EGIHGFDERVDLESVRKVTKTIALFVAEWCG 423 (427)
T ss_pred E--ECCCC------CccCCCCceEEHHHHHHHHHHHHHHHHHHhC
Confidence 5 56653 3599999999999999999999999999985
No 9
>PRK07338 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-45 Score=382.13 Aligned_cols=359 Identities=18% Similarity=0.201 Sum_probs=284.0
Q ss_pred hHHHHHHHhcCcchHHHHHHHHHHhhcCCCCCcch---HHHHHHHHHHHHhCCCcEEecc-----------------CCc
Q 011730 83 CSKEVMELARRPETVDWLKSVRRTIHQNPELAFQE---FETSRLLRAELDRMEIGYKYPL-----------------AKT 142 (478)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~l~~~L~~iPs~s~~E---~~~a~~l~~~L~~~G~~v~~~~-----------------~~~ 142 (478)
...++.+++ ++..+++++++++|++|||.++++ .++++||.++|+++||+++... .+.
T Consensus 4 ~~~~~~~~~--~~~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (402)
T PRK07338 4 EERAVLDLI--DDRQAPMLEQLIAWAAINSGSRNLDGLARMAELLADAFAALPGEIELIPLPPVEVIDADGRTLEQAHGP 81 (402)
T ss_pred HHHHHHHHH--hhhHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHhCCCcEEEecCCccccccccccccccCcCC
Confidence 456788888 888999999999999999998764 5789999999999999876421 125
Q ss_pred eEEEEEcCCCCcEEEEEEccccccCCCCCCCCccc---ccCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCC--C----
Q 011730 143 GIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKS---KVAGKMHACGH-D--AHVAMLIGAAKILKSREHLL--K---- 210 (478)
Q Consensus 143 ~via~~g~~~~p~v~~~aHlDvVP~~~~~~~Pf~~---~~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l--~---- 210 (478)
|++++++++.+++|+|+|||||||++. +||+. .++|++||||+ | ++++++|.|+++|++.+.++ .
T Consensus 82 nl~a~~~~~~~~~lll~gH~DvVp~~~---~Pf~~~~~~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~~ 158 (402)
T PRK07338 82 ALHVSVRPEAPRQVLLTGHMDTVFPAD---HPFQTLSWLDDGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGYDVL 158 (402)
T ss_pred eEEEEECCCCCccEEEEeecCccCCCC---CcccCCeEeeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCEEEE
Confidence 899998543346899999999999853 79986 46799999998 3 88999999999998765432 1
Q ss_pred --CCccCCC-cHHHHHHcCCCCCCcEEEEEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCC-CCCCCCHHHHH
Q 011730 211 --PAEEAGN-GAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAAN-PHRSVDPVLAA 286 (478)
Q Consensus 211 --~dEE~g~-G~~~l~~~g~~~~~D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~-p~~g~NAi~~~ 286 (478)
+|||.++ |++.+++++. .+.|++++++|+. +.+.+... .+|..+++|+++|+++|+|. |+.|.||+..+
T Consensus 159 ~~~dEE~g~~g~~~~~~~~~-~~~~~~i~~ep~~--~~~~v~~~----~kG~~~~~v~v~G~~aHs~~~p~~g~nAi~~~ 231 (402)
T PRK07338 159 INPDEEIGSPASAPLLAELA-RGKHAALTYEPAL--PDGTLAGA----RKGSGNFTIVVTGRAAHAGRAFDEGRNAIVAA 231 (402)
T ss_pred EECCcccCChhhHHHHHHHh-ccCcEEEEecCCC--CCCcEEee----cceeEEEEEEEEeEcccCCCCcccCccHHHHH
Confidence 9999774 8888888754 3578999998753 22333221 23678999999999999996 89999999999
Q ss_pred HHHHHHHHhhhhcccCCCCCcEEEEEEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEE
Q 011730 287 SAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVD 366 (478)
Q Consensus 287 ~~~i~~l~~l~~~~~~~~~~~~~~v~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~ 366 (478)
++++..|+++... ....+++++.|+||.+.|+||++|++++++|+.|.++.+++.++|++++++.+...+++++++
T Consensus 232 ~~~i~~l~~l~~~----~~~~t~~vg~i~gG~~~nvVP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~ 307 (402)
T PRK07338 232 AELALALHALNGQ----RDGVTVNVAKIDGGGPLNVVPDNAVLRFNIRPPTPEDAAWAEAELKKLIAQVNQRHGVSLHLH 307 (402)
T ss_pred HHHHHHHHhhhcc----CCCcEEEEEEEecCCCCceeccccEEEEEeccCCHHHHHHHHHHHHHHHhccccCCCeEEEEE
Confidence 9999999887422 234689999999999999999999999999999999999999999999998765556666654
Q ss_pred EecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHh-cccceEEecccCCCCCCCCCCCCCCc
Q 011730 367 FFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV-VPAAFYYIGIKNETLGSIHTGHSPYF 445 (478)
Q Consensus 367 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~-iP~~~~~~G~~~~~~~~~~~~H~~dE 445 (478)
... ..+++.....++++++.+++++++ +|.++. ...++|++|++++... +|+++ ++|++. ..+|++||
T Consensus 308 ~~~-~~~p~~~~~~~~~l~~~~~~~~~~-~g~~~~--~~~~~g~tDa~~~~~~giP~v~-~~Gpg~------~~~H~~~E 376 (402)
T PRK07338 308 GGF-GRPPKPIDAAQQRLFEAVQACGAA-LGLTID--WKDSGGVCDGNNLAAAGLPVVD-TLGVRG------GNIHSEDE 376 (402)
T ss_pred ccc-cCCCCCCCcchHHHHHHHHHHHHH-cCCCcc--cccCCccchHHHHhhcCCCeEe-ccCCCC------CCCCCccc
Confidence 321 112221122445799999998876 687542 3567889999999764 89885 456653 35899999
Q ss_pred ccCcCchHHHHHHHHHHHHHHHh
Q 011730 446 MIDEDVLPVGAAVHATIAERFLN 468 (478)
Q Consensus 446 ~i~~~~l~~~~~i~a~~~~~ll~ 468 (478)
+++++++.+++++|+.++.+|+.
T Consensus 377 ~v~i~~l~~~~~~~~~~l~~~~~ 399 (402)
T PRK07338 377 FVILDSLVERAQLSALILMRLAQ 399 (402)
T ss_pred eEehhhHHHHHHHHHHHHHHHhc
Confidence 99999999999999999998854
No 10
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=100.00 E-value=2.1e-45 Score=381.28 Aligned_cols=360 Identities=17% Similarity=0.189 Sum_probs=286.5
Q ss_pred HHHHHHHhcCcchHHHHHHHHHHhhcCCCCCcchH---HHHHHHHHHHHhCCCcEEecc----CCceEEEEEcCCCCcEE
Q 011730 84 SKEVMELARRPETVDWLKSVRRTIHQNPELAFQEF---ETSRLLRAELDRMEIGYKYPL----AKTGIRAWVGTGGPPFV 156 (478)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~l~~~L~~iPs~s~~E~---~~a~~l~~~L~~~G~~v~~~~----~~~~via~~g~~~~p~v 156 (478)
.+++.+++ ++..+++++++++|++|||.+++|. ++++||.++|+++||+++... .++|+++++++.+.|+|
T Consensus 25 ~~~~~~~~--~~~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~lia~~~g~~~~~i 102 (410)
T PRK06133 25 DAELLAAA--QQEQPAYLDTLKELVSIESGSGDAEGLKQVAALLAERLKALGAKVERAPTPPSAGDMVVATFKGTGKRRI 102 (410)
T ss_pred HHHHHHHH--HHhHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEEEECCCCCceE
Confidence 35688888 8889999999999999999997754 899999999999999987642 35799999954346899
Q ss_pred EEEEccccccCCC-CCCCCcccccCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC--------CCccCC-CcHHHHH
Q 011730 157 ALRADMDALPIQE-AVEWEYKSKVAGKMHACGH-D--AHVAMLIGAAKILKSREHLLK--------PAEEAG-NGAKRMM 223 (478)
Q Consensus 157 ~~~aHlDvVP~~~-~~~~Pf~~~~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~--------~dEE~g-~G~~~l~ 223 (478)
+|+|||||||.+. |+..||. .++|++||+|. | ++++++|.+++.|++.+..+. ++||.+ .|++.++
T Consensus 103 ll~~H~D~Vp~~~~w~~~Pf~-~~~~~iyGrG~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~~ 181 (410)
T PRK06133 103 MLIAHMDTVYLPGMLAKQPFR-IDGDRAYGPGIADDKGGVAVILHALKILQQLGFKDYGTLTVLFNPDEETGSPGSRELI 181 (410)
T ss_pred EEEeecCccCCCCccCCCCEE-EECCEEECCccccchHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCcccCCccHHHHH
Confidence 9999999999754 6778997 56799999996 3 889999999999987664322 999976 5899988
Q ss_pred HcCCCCCCcEEEEEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCC-CCCCCCCHHHHHHHHHHHHHhhhhcccC
Q 011730 224 ADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAA-NPHRSVDPVLAASAAVISLQGLVSREAN 302 (478)
Q Consensus 224 ~~g~~~~~D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has-~p~~g~NAi~~~~~~i~~l~~l~~~~~~ 302 (478)
++.. .+.|++|+.||+.. .+.+.. + ..|..+++++++|+++|+| .|+.|.||+..+++++..|+++..
T Consensus 182 ~~~~-~~~d~~i~~ep~~~--~~~v~~--~--~~G~~~~~v~v~G~~~Hsg~~p~~g~nAi~~~~~~i~~l~~~~~---- 250 (410)
T PRK06133 182 AELA-AQHDVVFSCEPGRA--KDALTL--A--TSGIATALLEVKGKASHAGAAPELGRNALYELAHQLLQLRDLGD---- 250 (410)
T ss_pred HHHh-ccCCEEEEeCCCCC--CCCEEE--e--ccceEEEEEEEEeeccccCCCcccCcCHHHHHHHHHHHHHhccC----
Confidence 7643 36799999997642 123332 2 2478899999999999986 699999999999999999987632
Q ss_pred CCCCcEEEEEEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccC--
Q 011730 303 PLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVN-- 380 (478)
Q Consensus 303 ~~~~~~~~v~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~-- 380 (478)
+....+++++.++||.+.|+||++|++.+++|+.|.++.+++.++|++++++ +...++++++++.. .++++..
T Consensus 251 ~~~~~t~~~~~i~gG~~~nvIP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~ 325 (410)
T PRK06133 251 PAKGTTLNWTVAKAGTNRNVIPASASAQADVRYLDPAEFDRLEADLQEKVKN-KLVPDTEVTLRFER----GRPPLEANA 325 (410)
T ss_pred CCCCeEEEeeEEECCCCCceeCCccEEEEEEEECCHHHHHHHHHHHHHHHhc-cCCCCeEEEEEecc----ccCCcccCc
Confidence 2234678999999999999999999999999999999999999999999987 33446777776542 3444433
Q ss_pred -CHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHh-cccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHH
Q 011730 381 -DEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV-VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAV 458 (478)
Q Consensus 381 -d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~-iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i 458 (478)
++++++.+++++++ .|......+..+++++|++++... +|++++++|+.. .++|++||+++++++..++++
T Consensus 326 ~~~~l~~~~~~~~~~-~~~~~~~~~~~~~g~tDa~~~~~~gip~v~~g~G~~~------~~aH~~nE~i~i~~~~~~~~~ 398 (410)
T PRK06133 326 ASRALAEHAQGIYGE-LGRRLEPIDMGTGGGTDAAFAAGSGKAAVLEGFGLVG------FGAHSNDEYIELNSIVPRLYL 398 (410)
T ss_pred chHHHHHHHHHHHHH-cCCCccccccCCCCCchHHHHHhcCCCceEecccCCC------CCCCCCCcEEEcccHHHHHHH
Confidence 34678888877776 465432112457889999999874 888765555532 359999999999999999999
Q ss_pred HHHHHHHHHhh
Q 011730 459 HATIAERFLNE 469 (478)
Q Consensus 459 ~a~~~~~ll~~ 469 (478)
|++++.+++++
T Consensus 399 ~~~~~~~~~~~ 409 (410)
T PRK06133 399 LTRMIMELSRD 409 (410)
T ss_pred HHHHHHHhhcC
Confidence 99999999875
No 11
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=2.1e-45 Score=377.15 Aligned_cols=348 Identities=17% Similarity=0.173 Sum_probs=276.1
Q ss_pred HHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEec--cCCceEEEEEcCCCCcEEEEEEccccccCCC---CCCC
Q 011730 99 WLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYP--LAKTGIRAWVGTGGPPFVALRADMDALPIQE---AVEW 173 (478)
Q Consensus 99 ~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~--~~~~~via~~g~~~~p~v~~~aHlDvVP~~~---~~~~ 173 (478)
++++++++|++|||++++|.+++++|.++|+++||+++.. .+..|+++++++ ++|+|+|++||||||+++ |+.+
T Consensus 3 ~~~~~l~~Lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~n~~~~~g~-~~~~i~l~~H~D~Vp~g~~~~w~~~ 81 (375)
T PRK13009 3 DVLELAQDLIRRPSVTPDDAGCQDLLAERLEALGFTCERMDFGDVKNLWARRGT-EGPHLCFAGHTDVVPPGDLEAWTSP 81 (375)
T ss_pred hHHHHHHHHhCCCCCCCchhhHHHHHHHHHHHcCCeEEEeccCCCcEEEEEecC-CCCEEEEEeecccCCCCCcccCCCC
Confidence 5789999999999999999999999999999999998753 345799999855 369999999999999864 5667
Q ss_pred Ccccc-cCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC--------CCccCC--CcHHHHHHcCC--CCCCcEEEEE
Q 011730 174 EYKSK-VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLK--------PAEEAG--NGAKRMMADGA--LEDVEAIFAV 237 (478)
Q Consensus 174 Pf~~~-~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~--------~dEE~g--~G~~~l~~~g~--~~~~D~~i~~ 237 (478)
||.+. ++|++||||+ | +++++++.|++.+++.+..++ +|||.+ .|++.+++... ...+|++++.
T Consensus 82 Pf~~~~~~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~i~~ 161 (375)
T PRK13009 82 PFEPTIRDGMLYGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIAFLITSDEEGPAINGTVKVLEWLKARGEKIDYCIVG 161 (375)
T ss_pred CCCcEEECCEEEecCCccChHHHHHHHHHHHHHHHhcCCCCceEEEEEEeecccccccCHHHHHHHHHHcCcCCCEEEEc
Confidence 99985 5899999998 4 788888888888887654442 999975 48888765311 1257999999
Q ss_pred ecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhccc-CCCCCcEEEEEEEeC
Q 011730 238 HVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREA-NPLDSQVVSVTYFNG 316 (478)
Q Consensus 238 ~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~~~-~~~~~~~~~v~~i~g 316 (478)
||+.....+. .+..|. +|..+++|+++|+++|++.|+.|.||+..++++|.+|+.+..+.. ..+.+.+++++.|+|
T Consensus 162 ep~~~~~~~~-~i~~g~--~g~~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~i~~i~~ 238 (375)
T PRK13009 162 EPTSTERLGD-VIKNGR--RGSLTGKLTVKGVQGHVAYPHLADNPIHLAAPALAELAATEWDEGNEFFPPTSLQITNIDA 238 (375)
T ss_pred CCCcccCCCC-eEEEec--ceEEEEEEEEEecCcccCCCCcccCHHHHHHHHHHHHHhhhccCCCccCCCceEEEEEEec
Confidence 8764332221 122232 378899999999999999999999999999999999987632222 224556899999998
Q ss_pred CC-ccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHh
Q 011730 317 GD-HLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDL 395 (478)
Q Consensus 317 G~-~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 395 (478)
|. +.|+||++|++.+++|++|.++.+++.++|++++++ .++++++++.. ...|...+++++++.+++++++.
T Consensus 239 G~~~~nvip~~~~~~~diR~~~~~~~e~i~~~i~~~~~~----~~~~~~~~~~~---~~~p~~~~~~~~~~~l~~a~~~~ 311 (375)
T PRK13009 239 GTGATNVIPGELEAQFNFRFSTEHTAESLKARVEAILDK----HGLDYTLEWTL---SGEPFLTPPGKLVDAVVAAIEAV 311 (375)
T ss_pred CCCCCcccCCcEEEEEEEecCCCCCHHHHHHHHHHHHHh----cCCCeEEEEec---CCCcccCCCcHHHHHHHHHHHHH
Confidence 86 789999999999999999999999999999999875 35677776542 11222223478999999999998
Q ss_pred cCCCcccccCCCCccchHHHHHH-hcccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHH
Q 011730 396 LGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFL 467 (478)
Q Consensus 396 ~G~~~~~~~~~~~g~tD~~~~~~-~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll 467 (478)
+|.++. ....++++|++++.+ .+|++. +|++. ..+|++||+++++++.+++++|++++.+|+
T Consensus 312 ~g~~~~--~~~~~g~tda~~~~~~g~p~v~--~Gp~~------~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 374 (375)
T PRK13009 312 TGITPE--LSTSGGTSDARFIADYGAQVVE--FGPVN------ATIHKVNECVSVADLEKLTRIYERILERLL 374 (375)
T ss_pred hCCCce--eeccCCCccHHHHHHcCCCeEE--eccCc------ccCCCCCCcEEHHHHHHHHHHHHHHHHHHh
Confidence 888753 345678899999987 477764 46553 359999999999999999999999999886
No 12
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=100.00 E-value=4.4e-45 Score=374.15 Aligned_cols=345 Identities=19% Similarity=0.214 Sum_probs=270.9
Q ss_pred HHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEec--cCCceEEEEEcCCCCcEEEEEEccccccCCC---CCCCCc
Q 011730 101 KSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYP--LAKTGIRAWVGTGGPPFVALRADMDALPIQE---AVEWEY 175 (478)
Q Consensus 101 ~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~--~~~~~via~~g~~~~p~v~~~aHlDvVP~~~---~~~~Pf 175 (478)
++++++|++|||+|++|.++++||.++|+++||+++.. .+..|++++.++ ++|+|+|++|+||||+++ |+.+||
T Consensus 2 ~~~l~~lv~ips~s~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~~g~-~~~~i~~~~H~DtVp~~~~~~W~~~p~ 80 (370)
T TIGR01246 2 TELAKELISRPSVTPNDAGCQDIIAERLEKLGFEIEWMHFGDTKNLWATRGT-GEPVLAFAGHTDVVPAGPEEQWSSPPF 80 (370)
T ss_pred hHHHHHHhcCCCCCcchHHHHHHHHHHHHHCCCEEEEEecCCCceEEEEecC-CCcEEEEEccccccCCCCccccccCCC
Confidence 57899999999999999999999999999999997653 245689998754 469999999999999864 577899
Q ss_pred ccc-cCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC--------CCccCC--CcHHHHHHcCC--CCCCcEEEEEec
Q 011730 176 KSK-VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLK--------PAEEAG--NGAKRMMADGA--LEDVEAIFAVHV 239 (478)
Q Consensus 176 ~~~-~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~--------~dEE~g--~G~~~l~~~g~--~~~~D~~i~~~~ 239 (478)
++. ++|++||||+ | +++++++.|++.+++.+..++ +|||.+ .|++.+++... ...+|++|+.||
T Consensus 81 ~~~~~dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~~~G~~~~~~~~~~~~~~~d~~i~~ep 160 (370)
T TIGR01246 81 EPVERDGKLYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSISLLITSDEEGTAIDGTKKVVETLMARDELIDYCIVGEP 160 (370)
T ss_pred CcEEECCEEEecccccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCCcCHHHHHHHHHhcCCCCCEEEEcCC
Confidence 984 6899999998 5 777777788887776654332 999975 48888765311 124799999997
Q ss_pred CCCCCcceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhcccC-CCCCcEEEEEEEeCCC
Q 011730 240 SHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREAN-PLDSQVVSVTYFNGGD 318 (478)
Q Consensus 240 ~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~~~~-~~~~~~~~v~~i~gG~ 318 (478)
+.....+.. +..+. +|..+++++++|+++|++.|+.|.||+..+++++..|+........ .+.+.+++++.|+||.
T Consensus 161 ~~~~~~~~~-i~~~~--~G~~~~~v~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~t~~i~~i~~g~ 237 (370)
T TIGR01246 161 SSVKKLGDV-IKNGR--RGSITGNLTIKGIQGHVAYPHLANNPIHKAAPALAELTAIKWDEGNEFFPPTSLQITNIHAGT 237 (370)
T ss_pred CCcccCCce-EEEee--eEEEEEEEEEEccCcccCCcccCCCHHHHHHHHHHHHhhhhhccCCccCCCCceEeeeeecCC
Confidence 643322211 22222 3788999999999999999999999999999999999876322211 2345789999999996
Q ss_pred -ccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcC
Q 011730 319 -HLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLG 397 (478)
Q Consensus 319 -~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G 397 (478)
..|+||++|++.+|+|++|.++.+++.+.|++++++ +++++++++.. ...|...+++++++.+++++++.+|
T Consensus 238 ~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~----~~~~~~v~~~~---~~~p~~~~~~~~~~~~~~a~~~~~g 310 (370)
T TIGR01246 238 GANNVIPGELYVQFNLRFSTEVSDEILKQRVEAILDQ----HGLDYDLEWSL---SGEPFLTNDGKLIDKAREAIEETNG 310 (370)
T ss_pred CCCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHH----cCCCEEEEEec---CCcceeCCCCHHHHHHHHHHHHHhC
Confidence 679999999999999999999999999999998775 35667776542 1222223478999999999998888
Q ss_pred CCcccccCCCCccchHHHHHH-hcccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHH
Q 011730 398 PMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERF 466 (478)
Q Consensus 398 ~~~~~~~~~~~g~tD~~~~~~-~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~l 466 (478)
.++. ...+++++|++++.. .+|++. +|++. ..+|++||+++++++.+++++|++++.+|
T Consensus 311 ~~~~--~~~~~g~~d~~~~~~~g~p~~~--~Gp~~------~~~H~~~E~i~i~~l~~~~~~~~~~l~~~ 370 (370)
T TIGR01246 311 IKPE--LSTGGGTSDGRFIALMGAEVVE--FGPVN------ATIHKVNECVSIEDLEKLSDVYQDLLENL 370 (370)
T ss_pred CCCc--eecCCCCchHHHHHHcCCCEEE--ecCCc------ccCCCCCceeEHHHHHHHHHHHHHHHHhC
Confidence 7653 355678899999976 477764 46653 35999999999999999999999998764
No 13
>PRK13004 peptidase; Reviewed
Probab=100.00 E-value=6.4e-45 Score=376.57 Aligned_cols=362 Identities=16% Similarity=0.166 Sum_probs=283.7
Q ss_pred HHHHHHhcCcchHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEeccCCceEEEEEcCCCCcEEEEEEcccc
Q 011730 85 KEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDA 164 (478)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~g~~~~p~v~~~aHlDv 164 (478)
+.+.+++ ++..+++++++++|++|||+|++|.+++++|.++|+++||++.......|++++++++ .|+|+|++||||
T Consensus 4 ~~~~~~~--~~~~~~~~~~l~~lv~ips~s~~e~~~a~~l~~~l~~~G~~~~~~~~~~n~~a~~~~~-~~~i~~~~H~Dt 80 (399)
T PRK13004 4 KLILMLA--EKYKADMTRFLRDLIRIPSESGDEKRVVKRIKEEMEKVGFDKVEIDPMGNVLGYIGHG-KKLIAFDAHIDT 80 (399)
T ss_pred HHHHHHH--HHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCcEEEEcCCCeEEEEECCC-CcEEEEEeccCc
Confidence 6788888 8889999999999999999999999999999999999999855444456899998654 489999999999
Q ss_pred ccCCC---CCCCCcccc-cCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC--------CCccCC--CcHHHHHHcCC
Q 011730 165 LPIQE---AVEWEYKSK-VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLK--------PAEEAG--NGAKRMMADGA 227 (478)
Q Consensus 165 VP~~~---~~~~Pf~~~-~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~--------~dEE~g--~G~~~l~~~g~ 227 (478)
||.++ |+.+||+.. ++|++||||+ | ++++++|+|++.|++.+..+. +|||.+ .|.+.+++++.
T Consensus 81 Vp~~~~~~w~~~P~~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~g~~~~~~~~~~~ 160 (399)
T PRK13004 81 VGIGDIKNWDFDPFEGEEDDGRIYGRGTSDQKGGMASMVYAAKIIKDLGLDDEYTLYVTGTVQEEDCDGLCWRYIIEEDK 160 (399)
T ss_pred cCCCChhhcccCCCccEEECCEEEeCCccccchHHHHHHHHHHHHHhcCCCCCCeEEEEEEcccccCcchhHHHHHHhcC
Confidence 99864 566789865 5799999998 4 899999999999998764432 889964 36777877654
Q ss_pred CCCCcEEEEEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhc--ccCCCC
Q 011730 228 LEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSR--EANPLD 305 (478)
Q Consensus 228 ~~~~D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~--~~~~~~ 305 (478)
+ .+|++++.+++.. .+. .+ ..|..+++|+++|+++|++.|+.|.||+..+++++..|+.+... .....+
T Consensus 161 ~-~~d~~i~~e~~~~----~i~--~~--~~G~~~~~v~v~G~~~Ha~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~ 231 (399)
T PRK13004 161 I-KPDFVVITEPTDL----NIY--RG--QRGRMEIRVETKGVSCHGSAPERGDNAIYKMAPILNELEELNPNLKEDPFLG 231 (399)
T ss_pred C-CCCEEEEccCCCC----ceE--Ee--cceEEEEEEEEeccccccCCCCCCCCHHHHHHHHHHHHHhhccccccCCcCC
Confidence 4 4799999887531 222 22 23788999999999999999999999999999999999887432 112234
Q ss_pred CcEEEEEEEeCC-CccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEec---------CCCCCC
Q 011730 306 SQVVSVTYFNGG-DHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFD---------KGNTVY 375 (478)
Q Consensus 306 ~~~~~v~~i~gG-~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~---------~~~~~~ 375 (478)
..+++++.|.+| .+.|+||++|++.+|+|++|.++.+++.++++++++. ...+.++++.... .....+
T Consensus 232 ~~~~~v~~i~~g~~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 309 (399)
T PRK13004 232 KGTLTVSDIFSTSPSRCAVPDSCAISIDRRLTVGETWESVLAEIRALPAV--KKANAKVSMYNYDRPSYTGLVYPTECYF 309 (399)
T ss_pred CceEEEeeeecCCCCCCccCCEEEEEEEEcCCCCCCHHHHHHHHHHHHhh--ccccceEEEecccCCCcccccccccccc
Confidence 567899998876 5899999999999999999999999999999988432 2233444332110 000123
Q ss_pred CC--ccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHH--hcccceEEecccCCCCCCCCCCCCCCcccCcCc
Q 011730 376 PP--TVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE--VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDV 451 (478)
Q Consensus 376 ~~--~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~--~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~ 451 (478)
++ +..++++++.+++++++.+|.++. .....+++|.+.+.+ ++|++. +|++.. ..+|++||++++++
T Consensus 310 p~~~~~~~~~~~~~l~~a~~~~~g~~~~--~~~~~~~td~~~~~~~~Gip~v~--~Gpg~~-----~~aH~~nE~i~i~~ 380 (399)
T PRK13004 310 PTWLYPEDHEFVKAAVEAYKGLFGKAPE--VDKWTFSTNGVSIAGRAGIPTIG--FGPGKE-----PLAHAPNEYTWKEQ 380 (399)
T ss_pred cccccCCCCHHHHHHHHHHHHHhCCCCe--ecccccccCCeEEehhcCCCEEE--ECCCcc-----cccCCCCceeEHHH
Confidence 33 345789999999999998887653 245567788877753 489875 455532 36999999999999
Q ss_pred hHHHHHHHHHHHHHHHhh
Q 011730 452 LPVGAAVHATIAERFLNE 469 (478)
Q Consensus 452 l~~~~~i~a~~~~~ll~~ 469 (478)
+.+++++|++++.+||++
T Consensus 381 l~~~~~~~~~~~~~~~~~ 398 (399)
T PRK13004 381 LVKAAAMYAAIPKSLLKK 398 (399)
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 999999999999999964
No 14
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=100.00 E-value=6.8e-45 Score=375.93 Aligned_cols=358 Identities=16% Similarity=0.181 Sum_probs=277.2
Q ss_pred HHHHHhcCcchHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEeccCCceEEEEEcCCCCcEEEEEEccccc
Q 011730 86 EVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDAL 165 (478)
Q Consensus 86 ~~~~~~~~~~~~~~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~g~~~~p~v~~~aHlDvV 165 (478)
++.+++ +++.+++++++++|++|||++++|.++++||.++|+++||++.......|++++++.+ +|+|+|++|||||
T Consensus 3 ~~~~~i--~~~~~~~~~~~~~lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~n~~~~~g~~-~~~l~l~~H~DtV 79 (395)
T TIGR03320 3 QIKSEA--KKYRGDMIRFLRDLVAIPSESGDEKRVAERIKEEMEKLGFDKVEIDPMGNVLGYIGHG-PKLIAMDAHIDTV 79 (395)
T ss_pred hHHHHH--HHHHHHHHHHHHHHHcCCCCCCchHHHHHHHHHHHHHhCCcEEEECCCCCEEEEeCCC-CcEEEEEeccccc
Confidence 567777 7788999999999999999999999999999999999999843323346899988543 5899999999999
Q ss_pred cCCC---CCCCCcccc-cCCeEEeCcc---hHHHHHHHHHHHHHHhcCCCCC--------CCccCCCc--HHHHHHcCCC
Q 011730 166 PIQE---AVEWEYKSK-VAGKMHACGH---DAHVAMLIGAAKILKSREHLLK--------PAEEAGNG--AKRMMADGAL 228 (478)
Q Consensus 166 P~~~---~~~~Pf~~~-~~G~~~g~G~---dg~~a~~l~aa~~L~~~~~~l~--------~dEE~g~G--~~~l~~~g~~ 228 (478)
|+++ |+.+||.+. ++|++||||+ ++++++++.|++.|++.+..+. +|||.++| .+.+++...+
T Consensus 80 p~~~~~~w~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~A~~~l~~~g~~~~~~i~~~~~~dEE~~~g~~~~~~~~~~~~ 159 (395)
T TIGR03320 80 GIGDSKQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDGI 159 (395)
T ss_pred CCCCccccccCCCceEEECCEEEecCccCccchHHHHHHHHHHHHHcCCCCCceEEEEecccccccCchHHHHHHHhcCC
Confidence 9865 456699875 5799999997 3889999999999988654221 78887544 3566655433
Q ss_pred CCCcEEEEEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhcc-cCC-CCC
Q 011730 229 EDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSRE-ANP-LDS 306 (478)
Q Consensus 229 ~~~D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~~-~~~-~~~ 306 (478)
.+|++|+.+|+.. .+. .| ++|..+++|+++|+++|+|.|+.|.||+..++++|..|+++.... ..+ ++.
T Consensus 160 -~~d~~iv~ep~~~----~i~--~g--~~G~~~~~v~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~ 230 (395)
T TIGR03320 160 -KPEFVVITEPTDM----NIY--RG--QRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGK 230 (395)
T ss_pred -CCCEEEEcCCCcc----ceE--Ee--cceEEEEEEEEeeeccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCc
Confidence 5899999987532 222 22 247889999999999999999999999999999999998874321 122 345
Q ss_pred cEEEEEEEeCCC-ccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCC-----------C
Q 011730 307 QVVSVTYFNGGD-HLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNT-----------V 374 (478)
Q Consensus 307 ~~~~v~~i~gG~-~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~-----------~ 374 (478)
.+++++.|++|. +.|+||++|++.+|+|+.|.++.+++.++|+++++.. +.++++++.....+ .
T Consensus 231 ~t~~v~~i~~g~~~~NviP~~~~~~~diR~~p~~~~~~i~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (395)
T TIGR03320 231 GTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQ----GAEAKVEMYNYDRPSYTGLVYPTECY 306 (395)
T ss_pred CceeeeeeecCCCCcCccCCEEEEEEEEecCCCCCHHHHHHHHHHHHhhc----CCCceEeeeccCcccccccccccccc
Confidence 689999999876 8899999999999999999999999999999886542 23344443211001 1
Q ss_pred CCC--ccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHH-HHHH-hcccceEEecccCCCCCCCCCCCCCCcccCcC
Q 011730 375 YPP--TVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFS-FYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDED 450 (478)
Q Consensus 375 ~~~--~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~-~~~~-~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~ 450 (478)
+++ +..++++++.+++++++++|.++. ....++++|.. ++.+ ++|++. +|++.. .++|++||+|+++
T Consensus 307 ~~~~~~~~~~~~v~~l~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~g~p~v~--~Gpg~~-----~~aH~~nE~v~i~ 377 (395)
T TIGR03320 307 FPTWVLPEDHLITKAALETYKRLFGKEPG--VDKWTFSTNGVSIMGRHGIPVIG--FGPGDE-----DQAHAPNEKTWKE 377 (395)
T ss_pred cCccccCCCCHHHHHHHHHHHHHhCCCCc--eeecceecccceehhhcCCCEEE--ECCCch-----hhccCCCcEEEHH
Confidence 233 345789999999999998887653 23456677774 4444 488874 466542 4699999999999
Q ss_pred chHHHHHHHHHHHHHHHh
Q 011730 451 VLPVGAAVHATIAERFLN 468 (478)
Q Consensus 451 ~l~~~~~i~a~~~~~ll~ 468 (478)
++.+++++|++++.+||+
T Consensus 378 ~l~~~~~~~~~~~~~~~~ 395 (395)
T TIGR03320 378 DLVRAAAMYAAIPTVYLE 395 (395)
T ss_pred HHHHHHHHHHHHHHHhhC
Confidence 999999999999999874
No 15
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=8e-45 Score=375.87 Aligned_cols=355 Identities=19% Similarity=0.219 Sum_probs=277.0
Q ss_pred chHHHHHHHHHHhhcCCCCCc-----chHHHHHHHHHHHHhCCCc-EEecc-------C--CceEEEEEcC-CCCcEEEE
Q 011730 95 ETVDWLKSVRRTIHQNPELAF-----QEFETSRLLRAELDRMEIG-YKYPL-------A--KTGIRAWVGT-GGPPFVAL 158 (478)
Q Consensus 95 ~~~~~l~~l~~~L~~iPs~s~-----~E~~~a~~l~~~L~~~G~~-v~~~~-------~--~~~via~~g~-~~~p~v~~ 158 (478)
++.+++++++++|++|||+|+ .|.+++++|.++|+++||+ ++... . ++|+++++++ +++|+|+|
T Consensus 2 ~~~~~~~~~l~~lv~i~s~s~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~nl~~~~~g~~~~~~lll 81 (400)
T PRK13983 2 ELRDEMIELLSELIAIPAVNPDFGGEGEKEKAEYLESLLKEYGFDEVERYDAPDPRVIEGVRPNIVAKIPGGDGKRTLWI 81 (400)
T ss_pred chHHHHHHHHHHHhCcCCCCCCCCCccHHHHHHHHHHHHHHcCCceEEEEecCCcccccCCCccEEEEecCCCCCCeEEE
Confidence 457889999999999999984 4899999999999999998 76431 1 5899999854 34579999
Q ss_pred EEccccccCCC---CCCCCcccc-cCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC--------CCccCC--CcHHH
Q 011730 159 RADMDALPIQE---AVEWEYKSK-VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLK--------PAEEAG--NGAKR 221 (478)
Q Consensus 159 ~aHlDvVP~~~---~~~~Pf~~~-~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~--------~dEE~g--~G~~~ 221 (478)
++||||||+++ |+.+||... .+|++||||+ | +++++++.|++.|++.+..++ +|||.+ .|+++
T Consensus 82 ~~H~Dtvp~~~~~~W~~~p~~~~~~~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~~~ 161 (400)
T PRK13983 82 ISHMDVVPPGDLSLWETDPFKPVVKDGKIYGRGSEDNGQGIVSSLLALKALMDLGIRPKYNLGLAFVSDEETGSKYGIQY 161 (400)
T ss_pred EeeccccCCCCcccccCCCCcceeeCCEEEecCccCccchHHHHHHHHHHHHHhCCCCCCcEEEEEEeccccCCcccHHH
Confidence 99999999864 567899876 5799999996 3 666666778888887664433 999976 38999
Q ss_pred HHHc--CCCCCCcEEEEEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHh-hhh
Q 011730 222 MMAD--GALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQG-LVS 298 (478)
Q Consensus 222 l~~~--g~~~~~D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~-l~~ 298 (478)
+++. +.+.+.|++++.+. ..+.+.. +..+ +.|..+++|+++|+++|+|.|+.|+||+..+++++..++. +..
T Consensus 162 ~~~~~~~~~~~~d~~i~~~~--~~~~~~~-i~~~--~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~ 236 (400)
T PRK13983 162 LLKKHPELFKKDDLILVPDA--GNPDGSF-IEIA--EKSILWLKFTVKGKQCHASTPENGINAHRAAADFALELDEALHE 236 (400)
T ss_pred HHhhcccccCCCCEEEEecC--CCCCCce-eEEe--ecceEEEEEEEEeEccccCCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 9877 66666788887542 2333331 1222 2478899999999999999999999999999999999987 321
Q ss_pred cc--cCC-C--CCcEEEEEEEeCC-CccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCC
Q 011730 299 RE--ANP-L--DSQVVSVTYFNGG-DHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGN 372 (478)
Q Consensus 299 ~~--~~~-~--~~~~~~v~~i~gG-~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~ 372 (478)
.. ..+ + ...+++++.+.+| ...|+||++|++++++|++|.++.++++++|++++++.+...+.+++++.....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~nvvp~~~~~~~diR~~p~~~~~~v~~~l~~~~~~~~~~~~~~v~~~~~~~~- 315 (400)
T PRK13983 237 KFNAKDPLFDPPYSTFEPTKKEANVDNINTIPGRDVFYFDCRVLPDYDLDEVLKDIKEIADEFEEEYGVKIEVEIVQRE- 315 (400)
T ss_pred hhcccccccCCCCcccccceeecCCcCCcccCCeeEEEEEEEeCCCCCHHHHHHHHHHHHHHhccccCcceeEEEeecc-
Confidence 11 111 1 1245677888877 588999999999999999999999999999999999877666777777654210
Q ss_pred CCCCCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHH-hcccceEEecccCCCCCCCCCCCCCCcccCcCc
Q 011730 373 TVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDV 451 (478)
Q Consensus 373 ~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~-~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~ 451 (478)
....++..|+++++.+.+++++.+|.++. ...+++++|+.++.. ++|++.+ |++. ..+|++||++++++
T Consensus 316 ~~~~~~~~~~~~v~~l~~a~~~~~g~~~~--~~~~~g~td~~~~~~~gip~v~~--Gp~~------~~~H~~nE~v~i~~ 385 (400)
T PRK13983 316 QAPPPTPPDSEIVKKLKRAIKEVRGIEPK--VGGIGGGTVAAFLRKKGYPAVVW--STLD------ETAHQPNEYAKISN 385 (400)
T ss_pred CCccCCCCCcHHHHHHHHHHHHhcCCCce--eeeecCcHHHHHHHHcCCCEEEe--CCcc------ccCCCCCceeeHHH
Confidence 12234567889999999999998887654 345678899998875 4898764 5543 35999999999999
Q ss_pred hHHHHHHHHHHHHH
Q 011730 452 LPVGAAVHATIAER 465 (478)
Q Consensus 452 l~~~~~i~a~~~~~ 465 (478)
+.+++++|++++.+
T Consensus 386 l~~~~~~~~~~~~~ 399 (400)
T PRK13983 386 LIEDAKVFALLLLE 399 (400)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999764
No 16
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=9.3e-45 Score=374.80 Aligned_cols=353 Identities=17% Similarity=0.250 Sum_probs=284.0
Q ss_pred cchHHHHHHHHHHhhcCCCCC---cchHHHHHHHHHHHHhCCCcEEeccC-----------CceEEEEEcCCCCcEEEEE
Q 011730 94 PETVDWLKSVRRTIHQNPELA---FQEFETSRLLRAELDRMEIGYKYPLA-----------KTGIRAWVGTGGPPFVALR 159 (478)
Q Consensus 94 ~~~~~~l~~l~~~L~~iPs~s---~~E~~~a~~l~~~L~~~G~~v~~~~~-----------~~~via~~g~~~~p~v~~~ 159 (478)
|.+.+++++++++|++|||+| .+|.++++||.++|+++||+++.... ++|+++..+.+ +|+|+|+
T Consensus 2 ~~~~~~~~~~l~~lv~i~S~s~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ill~ 80 (394)
T PRK08651 2 EAMMFDIVEFLKDLIKIPTVNPPGENYEEIAEFLRDTLEELGFSTEIIEVPNEYVKKHDGPRPNLIARRGSG-NPHLHFN 80 (394)
T ss_pred chhHHHHHHHHHHHhcCCccCCCCcCHHHHHHHHHHHHHHcCCeEEEEecCccccccccCCcceEEEEeCCC-CceEEEE
Confidence 567899999999999999998 67789999999999999998775321 13467766544 4899999
Q ss_pred EccccccCCC--CCCCCcccc-cCCeEEeCcc---hHHHHHHHHHHHHHHhcC-CCCC----CCccCC-CcHHHHHHcCC
Q 011730 160 ADMDALPIQE--AVEWEYKSK-VAGKMHACGH---DAHVAMLIGAAKILKSRE-HLLK----PAEEAG-NGAKRMMADGA 227 (478)
Q Consensus 160 aHlDvVP~~~--~~~~Pf~~~-~~G~~~g~G~---dg~~a~~l~aa~~L~~~~-~~l~----~dEE~g-~G~~~l~~~g~ 227 (478)
+||||||+++ |+.+||++. .+|++||||+ +++++++|.+++.+++.+ ..+. ++||.+ .|++.+++++.
T Consensus 81 ~HlDtvp~~~~~~~~~Pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~~~v~~~~~~~EE~g~~G~~~~~~~~~ 160 (394)
T PRK08651 81 GHYDVVPPGEGWSVNVPFEPKVKDGKVYGRGASDMKGGIAALLAAFERLDPAGDGNIELAIVPDEETGGTGTGYLVEEGK 160 (394)
T ss_pred eeeeeecCCCCccccCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHhcCCCCEEEEEecCccccchhHHHHHhccC
Confidence 9999999864 377899986 5899999998 388999999999998654 2222 999987 49999999876
Q ss_pred CCCCcEEEEEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhccc------
Q 011730 228 LEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREA------ 301 (478)
Q Consensus 228 ~~~~D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~~~------ 301 (478)
+ ++|++++.+++.. +.+.. + ..|..+++|+++|+++|++.|+.|.||+..|++++.+|+....+..
T Consensus 161 ~-~~d~~i~~~~~~~---~~i~~--~--~~G~~~~~i~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~ 232 (394)
T PRK08651 161 V-TPDYVIVGEPSGL---DNICI--G--HRGLVWGVVKVYGKQAHASTPWLGINAFEAAAKIAERLKSSLSTIKSKYEYD 232 (394)
T ss_pred C-CCCEEEEecCCCC---CceEE--e--cccEEEEEEEEEEeccccCCCccccCHHHHHHHHHHHHHHHHHhhhcccccc
Confidence 5 4799998886542 12222 2 2378899999999999999999999999999999999976432111
Q ss_pred CC-CCCcEEEEEE--EeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCc
Q 011730 302 NP-LDSQVVSVTY--FNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPT 378 (478)
Q Consensus 302 ~~-~~~~~~~v~~--i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~ 378 (478)
.+ ....+++++. ++||.+.|+||++|++.+++|+.|.++.+++.++|++++++.+..+++++++++.. .+++.
T Consensus 233 ~~~~~~~~~~ig~~~i~gG~~~nviP~~a~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~~~~i~~~~----~~~~~ 308 (394)
T PRK08651 233 DERGAKPTVTLGGPTVEGGTKTNIVPGYCAFSIDRRLIPEETAEEVRDELEALLDEVAPELGIEVEFEITP----FSEAF 308 (394)
T ss_pred ccccCCCceeecceeeeCCCCCCccCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhccCCCeeEEEec----ccCCc
Confidence 11 2345678888 99999999999999999999999999999999999999999888888878876652 23333
Q ss_pred --cCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHh-cccceEEecccCCCCCCCCCCCCCCcccCcCchHHH
Q 011730 379 --VNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV-VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVG 455 (478)
Q Consensus 379 --~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~-iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~ 455 (478)
..++++++.+++++++.+|.++. +..+.+++|+++|... +|++++ |++.. ..+|++||+++++++.++
T Consensus 309 ~~~~~~~l~~~~~~a~~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~~--Gpg~~-----~~~H~~~E~i~~~~l~~~ 379 (394)
T PRK08651 309 VTDPDSELVKALREAIREVLGVEPK--KTISLGGTDARFFGAKGIPTVVY--GPGEL-----ELAHAPDEYVEVKDVEKA 379 (394)
T ss_pred cCCCCCHHHHHHHHHHHHHhCCCCc--eeeecCcccHHHHhhCCCcEEEE--CCCCh-----HhcCCCCceeEHHHHHHH
Confidence 34568999999999998887653 3567799999999875 898653 66542 369999999999999999
Q ss_pred HHHHHHHHHHHHh
Q 011730 456 AAVHATIAERFLN 468 (478)
Q Consensus 456 ~~i~a~~~~~ll~ 468 (478)
+++|.+++.+|.+
T Consensus 380 ~~i~~~~i~~l~~ 392 (394)
T PRK08651 380 AKVYEEVLKRLAK 392 (394)
T ss_pred HHHHHHHHHHhhc
Confidence 9999999998854
No 17
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=100.00 E-value=8.2e-45 Score=375.29 Aligned_cols=358 Identities=16% Similarity=0.165 Sum_probs=277.6
Q ss_pred HHHHHhcCcchHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEeccCCceEEEEEcCCCCcEEEEEEccccc
Q 011730 86 EVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDAL 165 (478)
Q Consensus 86 ~~~~~~~~~~~~~~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~g~~~~p~v~~~aHlDvV 165 (478)
++.+++ +++.+++++++++|++|||++++|.+++++|.++|+++||++.......|+++.++.+ .|+|+|++|||||
T Consensus 3 ~~~~~~--~~~~~~~~~~l~~Lv~ips~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~v~~~~g~~-~~~l~l~~H~DtV 79 (395)
T TIGR03526 3 QIKSEA--EKYRGDMIRFLRDLVAIPSESGDEGRVALRIKQEMEKLGFDKVEIDPMGNVLGYIGHG-PKLIAMDAHIDTV 79 (395)
T ss_pred hHHHHH--HHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCceEEEcCCCcEEEEeCCC-CCEEEEEeecccc
Confidence 466777 7888999999999999999999999999999999999999843333346899988643 5899999999999
Q ss_pred cCCC---CCCCCcccc-cCCeEEeCcc---hHHHHHHHHHHHHHHhcCCCCC--------CCccCCC--cHHHHHHcCCC
Q 011730 166 PIQE---AVEWEYKSK-VAGKMHACGH---DAHVAMLIGAAKILKSREHLLK--------PAEEAGN--GAKRMMADGAL 228 (478)
Q Consensus 166 P~~~---~~~~Pf~~~-~~G~~~g~G~---dg~~a~~l~aa~~L~~~~~~l~--------~dEE~g~--G~~~l~~~g~~ 228 (478)
|+++ |+.+||... ++|++||||+ +++++++|.|++.|++.+..++ ++||.++ |...+++++.+
T Consensus 80 p~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~g~~~~~~~~~~~~ 159 (395)
T TIGR03526 80 GIGDMDQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDKI 159 (395)
T ss_pred CCCCcccccCCCCceEEECCEEEecCccccchhHHHHHHHHHHHHHcCCCCCceEEEEEecccccCCcHhHHHHHhccCC
Confidence 9865 456689875 5789999996 4889999999999988654322 7888433 56677776555
Q ss_pred CCCcEEEEEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhcc-cCC-CCC
Q 011730 229 EDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSRE-ANP-LDS 306 (478)
Q Consensus 229 ~~~D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~~-~~~-~~~ 306 (478)
.+|++|+.+|+.. .+. .| ++|..+++|+++|+++|+|.|+.|.|||..+++++.+|+.+.... ..+ ++.
T Consensus 160 -~~d~~i~~ep~~~----~i~--~g--~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~ 230 (395)
T TIGR03526 160 -KPEFVVITEPTDM----NIY--RG--QRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGK 230 (395)
T ss_pred -CCCEEEecCCCCc----eEE--EE--cceEEEEEEEEecCCCccCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCcccCc
Confidence 5799999887531 222 23 247889999999999999999999999999999999998874321 222 345
Q ss_pred cEEEEEEEeCCC-ccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCC-----------C
Q 011730 307 QVVSVTYFNGGD-HLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNT-----------V 374 (478)
Q Consensus 307 ~~~~v~~i~gG~-~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~-----------~ 374 (478)
.+++++.|+||. +.|+||++|++.+++|++|.++.+++.+.|+++++.. +.++++++.....+ .
T Consensus 231 ~~~~v~~i~~g~~~~nviP~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (395)
T TIGR03526 231 GTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQ----GAEAEVEMYEYDRPSYTGLVYPTECY 306 (395)
T ss_pred cceeeeeeecCCCCCCccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHhc----CCcceEEEeccccccccccccccccc
Confidence 689999999875 8999999999999999999999999999999987642 23344433211001 1
Q ss_pred CCC--ccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHH-HHH-hcccceEEecccCCCCCCCCCCCCCCcccCcC
Q 011730 375 YPP--TVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSF-YSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDED 450 (478)
Q Consensus 375 ~~~--~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~-~~~-~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~ 450 (478)
+++ +..++++++.+.+++++++|..+. ....++++|.+. +.+ .+|++. +|++.. ..+|++||+++++
T Consensus 307 ~p~~~~~~~~~~~~~l~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~g~p~v~--~Gpg~~-----~~aH~~dE~i~i~ 377 (395)
T TIGR03526 307 FPTWVLPEDHLITKAALETYKRLFGKEPG--VDKWTFSTNGVSIMGRHGIPVIG--FGPGDE-----DQAHAPNEKTWKE 377 (395)
T ss_pred cCccccCCCCHHHHHHHHHHHHHhCCCCc--eeeeeeecccceehhhcCCCEEE--ECCcch-----hhccCCCceEEHH
Confidence 232 346789999999999998887653 234566677754 444 488874 466542 4699999999999
Q ss_pred chHHHHHHHHHHHHHHHh
Q 011730 451 VLPVGAAVHATIAERFLN 468 (478)
Q Consensus 451 ~l~~~~~i~a~~~~~ll~ 468 (478)
++.+++++|++++.+|++
T Consensus 378 ~l~~~~~~~~~~~~~~~~ 395 (395)
T TIGR03526 378 DLVKAAAMYAAIPTVYLQ 395 (395)
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 999999999999999874
No 18
>PRK05111 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=2.8e-44 Score=369.87 Aligned_cols=344 Identities=16% Similarity=0.210 Sum_probs=271.7
Q ss_pred HHHHHHHHHHhhcCCCCCcch-------HHHHHHHHHHHHhCCCcEEecc-----CCceEEEEEcCCCCcEEEEEEcccc
Q 011730 97 VDWLKSVRRTIHQNPELAFQE-------FETSRLLRAELDRMEIGYKYPL-----AKTGIRAWVGTGGPPFVALRADMDA 164 (478)
Q Consensus 97 ~~~l~~l~~~L~~iPs~s~~E-------~~~a~~l~~~L~~~G~~v~~~~-----~~~~via~~g~~~~p~v~~~aHlDv 164 (478)
.+++++++++|++|||+|++| .++++||.++|+++|++++... +++|++++++++ .++|+|+|||||
T Consensus 4 ~~~~i~~l~~lv~i~s~s~~e~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~nvia~~g~~-~~~il~~~H~Dv 82 (383)
T PRK05111 4 LPSFIEMYRALIATPSISATDPALDQSNRAVIDLLAGWFEDLGFNVEIQPVPGTRGKFNLLASLGSG-EGGLLLAGHTDT 82 (383)
T ss_pred chHHHHHHHHHhCcCCcCCCCcccccchHHHHHHHHHHHHHCCCeEEEEecCCCCCCceEEEEeCCC-CCeEEEEeeece
Confidence 347999999999999999876 5699999999999999876431 457999999543 468999999999
Q ss_pred ccCC--CCCCCCcccc-cCCeEEeCcc---hHHHHHHHHHHHHHHhcCCC--C----CCCccCC-CcHHHHHHcCCCCCC
Q 011730 165 LPIQ--EAVEWEYKSK-VAGKMHACGH---DAHVAMLIGAAKILKSREHL--L----KPAEEAG-NGAKRMMADGALEDV 231 (478)
Q Consensus 165 VP~~--~~~~~Pf~~~-~~G~~~g~G~---dg~~a~~l~aa~~L~~~~~~--l----~~dEE~g-~G~~~l~~~g~~~~~ 231 (478)
||++ .|+.+||+.. ++|++||||+ +|+++++|.+++.|++.+.+ + .+|||.+ .|++.+++++.+ ..
T Consensus 83 vp~~~~~W~~~Pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~-~~ 161 (383)
T PRK05111 83 VPFDEGRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILEALRDIDLTKLKKPLYILATADEETSMAGARAFAEATAI-RP 161 (383)
T ss_pred ecCCCCcCcCCCCccEEECCEEEecccccccHHHHHHHHHHHHHhhcCCCCCeEEEEEeccccCcccHHHHHhcCCC-CC
Confidence 9975 4678899974 6899999997 48999999999998864322 1 1999976 599999988765 46
Q ss_pred cEEEEEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhc----ccCC---C
Q 011730 232 EAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSR----EANP---L 304 (478)
Q Consensus 232 D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~----~~~~---~ 304 (478)
|++|+.+|+...+ . .+ .+|..+++|+++|+++|+|.|+.|.||+..+++++..|+.+... ...+ .
T Consensus 162 d~~i~~ep~~~~~----~--~~--~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 233 (383)
T PRK05111 162 DCAIIGEPTSLKP----V--RA--HKGHMSEAIRITGQSGHSSDPALGVNAIELMHDVIGELLQLRDELQERYHNPAFTV 233 (383)
T ss_pred CEEEEcCCCCCce----e--ec--ccceEEEEEEEEeechhccCCccCcCHHHHHHHHHHHHHHHHHHHhccCCCccCCC
Confidence 8999888764221 1 12 24788999999999999999999999999999999999876321 1112 1
Q ss_pred CCcEEEEEEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCC--ccCCH
Q 011730 305 DSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPP--TVNDE 382 (478)
Q Consensus 305 ~~~~~~v~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~--~~~d~ 382 (478)
...+++++.|+||...|+||++|++.+|+|+.|+++.+++.++|++.+++.+..++++++++... ..+++ ...++
T Consensus 234 ~~~t~~i~~i~gg~~~NvVP~~~~~~~diR~~p~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 310 (383)
T PRK05111 234 PYPTLNLGHIHGGDAPNRICGCCELHFDIRPLPGMTLEDLRGLLREALAPVSERWPGRITVAPLH---PPIPGYECPADH 310 (383)
T ss_pred CCCceeEeeeecCCcCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeccc---cCCCCcCCCCCC
Confidence 35789999999999999999999999999999999999999999999998887777777775321 12232 23566
Q ss_pred HHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHh-cccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHH
Q 011730 383 DMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV-VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHAT 461 (478)
Q Consensus 383 ~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~-iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~ 461 (478)
++++.++++ +|..+ ....+++|+.++... +|+++ +|+++. ..+|++||++++++|.+++++|++
T Consensus 311 ~l~~~~~~~----~g~~~----~~~~~~~Da~~~~~~g~p~v~--~G~g~~-----~~~H~~~E~v~~~~l~~~~~i~~~ 375 (383)
T PRK05111 311 QLVRVVEKL----LGHKA----EVVNYCTEAPFIQQLGCPTLV--LGPGSI-----EQAHQPDEYLELSFIKPTRELLRQ 375 (383)
T ss_pred HHHHHHHHH----hCCCC----ceeeeeccHHHHHhcCCCEEE--ECCCch-----HhCcCCCCcccHHHHHHHHHHHHH
Confidence 788776554 35442 234578999888764 78776 455432 369999999999999999999999
Q ss_pred HHHHHHh
Q 011730 462 IAERFLN 468 (478)
Q Consensus 462 ~~~~ll~ 468 (478)
++.+|+.
T Consensus 376 ~~~~~~~ 382 (383)
T PRK05111 376 LIHHFCL 382 (383)
T ss_pred HHHHHhc
Confidence 9999864
No 19
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=100.00 E-value=4.3e-45 Score=374.92 Aligned_cols=340 Identities=17% Similarity=0.184 Sum_probs=270.2
Q ss_pred HHHHHhhcCCC---CCcchHHHHHHHHHHHHhCCCcEEecc---CCce----EEEEE-cCCCCcEEEEEEccccccCC--
Q 011730 102 SVRRTIHQNPE---LAFQEFETSRLLRAELDRMEIGYKYPL---AKTG----IRAWV-GTGGPPFVALRADMDALPIQ-- 168 (478)
Q Consensus 102 ~l~~~L~~iPs---~s~~E~~~a~~l~~~L~~~G~~v~~~~---~~~~----via~~-g~~~~p~v~~~aHlDvVP~~-- 168 (478)
+++++|++||| ++++|.++++||.++|+++|++++... ...+ +++.+ +.+++|+|+|++||||||.+
T Consensus 2 ~~l~~lv~i~s~~~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ill~~H~DtVp~~~~ 81 (375)
T TIGR01910 2 ELLKDLISIPSVNPPGGNEETIANYIKDLLREFGFSTDVIEITDDRLKVLGKVVVKEPGNGNEKSLIFNGHYDVVPAGDL 81 (375)
T ss_pred hhHHhhhcCCCCCCCCcCHHHHHHHHHHHHHHCCCceEEEecCchhcccccceEEeccCCCCCCEEEEecccccccCCCh
Confidence 67889999999 888999999999999999999986531 2222 44444 54446899999999999986
Q ss_pred -CCCCCCcccc-cCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC--------CCccCC-CcHHHHHHcCCCCCCcEE
Q 011730 169 -EAVEWEYKSK-VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLK--------PAEEAG-NGAKRMMADGALEDVEAI 234 (478)
Q Consensus 169 -~~~~~Pf~~~-~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~--------~dEE~g-~G~~~l~~~g~~~~~D~~ 234 (478)
+|+.+||+.. ++|++||||+ | ++++++|.+++.|++.+..++ ++||.+ .|++.+++++.+.+.|++
T Consensus 82 ~~w~~~Pf~~~~~~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~~~d~~ 161 (375)
T TIGR01910 82 ELWKTDPFKPVEKDGKLYGRGATDMKGGLVALLYALKAIREAGIKPNGNIILQSVVDEESGEAGTLYLLQRGYFKDADGV 161 (375)
T ss_pred hhCcCCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEEcCcccCchhHHHHHHcCCCCCCCEE
Confidence 3567799974 5799999997 3 889999999999988654332 999976 599999998877668999
Q ss_pred EEEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhccc------CCCCCcE
Q 011730 235 FAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREA------NPLDSQV 308 (478)
Q Consensus 235 i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~~~------~~~~~~~ 308 (478)
|+.+++. .+.+.. + ..|..+++|+++|+++|+|.|+.|.|||..++++|.+|+++..... ......+
T Consensus 162 i~~~~~~---~~~v~~--~--~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t 234 (375)
T TIGR01910 162 LIPEPSG---GDNIVI--G--HKGSIWFKLRVKGKQAHASFPQFGVNAIMKLAKLITELNELEEHIYARNSYGFIPGPIT 234 (375)
T ss_pred EECCCCC---CCceEE--E--ecceEEEEEEEeeeecccCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccccCCCcc
Confidence 9888653 122222 2 2378899999999999999999999999999999999988742211 1124578
Q ss_pred EEEEEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHH
Q 011730 309 VSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHV 388 (478)
Q Consensus 309 ~~v~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~ 388 (478)
++++.|+||...|+||++|++.+++|+.|.++.+++.++|++++++.+...+++++++.... .+.......++++++.+
T Consensus 235 ~~i~~i~gG~~~nviP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 313 (375)
T TIGR01910 235 FNPGVIKGGDWVNSVPDYCEFSIDVRIIPEENLDEVKQIIEDVVKALSKSDGWLYENEPVVK-WSGPNETPPDSRLVKAL 313 (375)
T ss_pred ccceeEECCCCcCcCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhcCcHHhhCCCeee-ecCCcCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999987766666666543321 12122455788999999
Q ss_pred HHHHHHhcCCCcccccCCCCccchHHHHHHh-cccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHH
Q 011730 389 KKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV-VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAV 458 (478)
Q Consensus 389 ~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~-iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i 458 (478)
++++++.+|.++. ....++++|++++.+. +|++. +|++.. ..+|++||+++++++.+++++
T Consensus 314 ~~~~~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~--~Gpg~~-----~~~H~~~E~v~~~~~~~~~~~ 375 (375)
T TIGR01910 314 EAIIKKVRGIEPE--VLVSTGGTDARFLRKAGIPSIV--YGPGDL-----ETAHQVNEYISIKNLVESTKV 375 (375)
T ss_pred HHHHHHHhCCCCe--EeeeccchhHHHHHHcCCcEEE--ECCCCc-----cccCCCCceeEHHHHHHHhhC
Confidence 9999988887653 3567899999999874 99875 455532 469999999999999998864
No 20
>PRK08596 acetylornithine deacetylase; Validated
Probab=100.00 E-value=4.2e-44 Score=372.84 Aligned_cols=364 Identities=16% Similarity=0.157 Sum_probs=283.3
Q ss_pred HHHHHhcCcchHHHHHHHHHHhhcCCCCC---cchHHHHHHHHHHHHhCCCcEEec---cCCceEEEEE-cCCC--CcEE
Q 011730 86 EVMELARRPETVDWLKSVRRTIHQNPELA---FQEFETSRLLRAELDRMEIGYKYP---LAKTGIRAWV-GTGG--PPFV 156 (478)
Q Consensus 86 ~~~~~~~~~~~~~~l~~l~~~L~~iPs~s---~~E~~~a~~l~~~L~~~G~~v~~~---~~~~~via~~-g~~~--~p~v 156 (478)
++.+++ ++..+++++++++|++|||++ ++|.++++||.++|+++||+++.. .+++|+++++ ++++ +|+|
T Consensus 3 ~~~~~i--~~~~~~~~~~l~~Lv~i~S~s~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~nvia~~~g~~~~~~~~l 80 (421)
T PRK08596 3 QLLEQI--ELRKDELLELLKTLVRFETPAPPARNTNEAQEFIAEFLRKLGFSVDKWDVYPNDPNVVGVKKGTESDAYKSL 80 (421)
T ss_pred HHHHHH--HhhHHHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHCCCeEEEEEccCCCceEEEEecCCCCCCCcEE
Confidence 467788 788899999999999999998 478889999999999999998753 3568999999 4332 3689
Q ss_pred EEEEccccccCCC---CCCCCcccc-cCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC--------CCccCC-CcHH
Q 011730 157 ALRADMDALPIQE---AVEWEYKSK-VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLK--------PAEEAG-NGAK 220 (478)
Q Consensus 157 ~~~aHlDvVP~~~---~~~~Pf~~~-~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~--------~dEE~g-~G~~ 220 (478)
+|+|||||||+++ |+.+||.+. ++|++||||+ | ++++++|.|+++|++.+..++ +|||.+ .|++
T Consensus 81 ll~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~G~~ 160 (421)
T PRK08596 81 IINGHMDVAEVSADEAWETNPFEPTIKDGWLYGRGAADMKGGLAGALFAIQLLHEAGIELPGDLIFQSVIGEEVGEAGTL 160 (421)
T ss_pred EEeccccccCCCCccccccCCCCcEEECCEEEeccccccchHHHHHHHHHHHHHHcCCCCCCcEEEEEEeccccCCcCHH
Confidence 9999999999865 567799875 5899999998 3 899999999999998765443 999976 5999
Q ss_pred HHHHcCCCCCCcEEEEEecCCCCCcceEEeecccccceeeEEEEEEEee----------cCCCCCCCCCCCHHHHHHHHH
Q 011730 221 RMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGK----------KGGAANPHRSVDPVLAASAAV 290 (478)
Q Consensus 221 ~l~~~g~~~~~D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~----------~~Has~p~~g~NAi~~~~~~i 290 (478)
++++.+. .+|++|+.+|+... + .| ..|...++++++|. .+|++.|+.|.|||..++++|
T Consensus 161 ~~~~~~~--~~d~~i~~ep~~~~----~---~~--~~G~~~~~~~v~g~~~~~~~~~~~~~H~~~p~~G~nai~~~~~~i 229 (421)
T PRK08596 161 QCCERGY--DADFAVVVDTSDLH----M---QG--QGGVITGWITVKSPQTFHDGTRRQMIHAGGGLFGASAIEKMMKII 229 (421)
T ss_pred HHHhcCC--CCCEEEECCCCCCc----c---cc--ccceeeEEEEEEeecccccccccccccccCCccCcCHHHHHHHHH
Confidence 9998875 47999999975421 1 11 12455566667765 479999999999999999999
Q ss_pred HHHHhhhhc-----ccC--CCCCcEEEEEEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhc----
Q 011730 291 ISLQGLVSR-----EAN--PLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVF---- 359 (478)
Q Consensus 291 ~~l~~l~~~-----~~~--~~~~~~~~v~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~---- 359 (478)
..|+.+... ... +.+..+++++.|+||...|+||++|++.+|+|+.|+++.+++.++|++++++.+...
T Consensus 230 ~~l~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~ 309 (421)
T PRK08596 230 QSLQELERHWAVMKSYPGFPPGTNTINPAVIEGGRHAAFIADECRLWITVHFYPNETYEQVIKEIEEYIGKVAAADPWLR 309 (421)
T ss_pred HHHHHHHHHHhhcccCccCCCCCcceeeeeeeCCCCCCccCceEEEEEEeeeCCCCCHHHHHHHHHHHHHHHHhcChhhh
Confidence 999886321 111 124468999999999999999999999999999999999999999999998754311
Q ss_pred CCeeEEEEec-----CCCCCCCC--ccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHH-hcccceEEecccC
Q 011730 360 RCSATVDFFD-----KGNTVYPP--TVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKN 431 (478)
Q Consensus 360 g~~~ev~~~~-----~~~~~~~~--~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~-~iP~~~~~~G~~~ 431 (478)
...+++++.. .....+++ +..++++++.+.+++++++|.++. .....+++|++++.. .+|++. +|++.
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~a~~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~--~Gpg~ 385 (421)
T PRK08596 310 ENPPQFKWGGESMIEDRGEIFPSLEIDSEHPAVKTLSSAHESVLSKNAI--LDMSTTVTDGGWFAEFGIPAVI--YGPGT 385 (421)
T ss_pred hCCceeEEecccccccccccCCCccCCCCchHHHHHHHHHHHHhCCCCe--eeEEeeecchhhhhhcCCCEEE--ECCCc
Confidence 0112222210 00011233 345789999999999998887652 345678999999976 489875 46553
Q ss_pred CCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHHhhcc
Q 011730 432 ETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEYG 471 (478)
Q Consensus 432 ~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll~~~~ 471 (478)
. ..+|++||+++++++.+++++|++++.+||...+
T Consensus 386 ~-----~~~H~~~E~v~i~~~~~~~~~~~~~l~~~~~~~~ 420 (421)
T PRK08596 386 L-----EEAHSVNEKVEIEQLIEYTKVITAFIYEWCHTKK 420 (421)
T ss_pred c-----cccCCCCceEEHHHHHHHHHHHHHHHHHHhCCCC
Confidence 2 4699999999999999999999999999987543
No 21
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=100.00 E-value=7.3e-44 Score=368.85 Aligned_cols=357 Identities=17% Similarity=0.161 Sum_probs=271.3
Q ss_pred HHHHHHHHHHhhcCCCCCcc--hHHHHHHHHHHHHhCCCcEEec---cCCceEEEEE-cCCC-CcEEEEEEccccccCC-
Q 011730 97 VDWLKSVRRTIHQNPELAFQ--EFETSRLLRAELDRMEIGYKYP---LAKTGIRAWV-GTGG-PPFVALRADMDALPIQ- 168 (478)
Q Consensus 97 ~~~l~~l~~~L~~iPs~s~~--E~~~a~~l~~~L~~~G~~v~~~---~~~~~via~~-g~~~-~p~v~~~aHlDvVP~~- 168 (478)
.+++++++++|++|||++++ |.++++||.++|+++|++++.. .+++|+++++ ++++ .|+|+|++||||||++
T Consensus 8 ~~~~~~~l~~lv~ipS~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~g~~~l~~~~~g~~~~~~~i~l~~H~DvVp~~~ 87 (400)
T TIGR01880 8 EDIAVTRFREYLRINTVQPNPDYAACVDFLIKQADELGLARKTIEFVPGKPVVVLTWPGSNPELPSILLNSHTDVVPVFR 87 (400)
T ss_pred hHHHHHHHHHHhccCccCCCccHHHHHHHHHHHHHhCCCceeEEEecCCceeEEEEEecCCCCCCeEEEEcccccCCCCc
Confidence 67889999999999999764 6789999999999999987542 2567899998 4343 4899999999999985
Q ss_pred -CCCCCCcccc--cCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC--------CCccCCC--cHHHHHHcCCCCCCc
Q 011730 169 -EAVEWEYKSK--VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLK--------PAEEAGN--GAKRMMADGALEDVE 232 (478)
Q Consensus 169 -~~~~~Pf~~~--~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~--------~dEE~g~--G~~~l~~~g~~~~~D 232 (478)
.|+.+||.+. ++|++||||+ | +.++++|.|++.|++.+.+++ +|||.++ |++.+++++.+...|
T Consensus 88 ~~W~~~Pf~~~~~~dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~~~~~~~v~l~~~~dEE~g~~~G~~~~~~~~~~~~~~ 167 (400)
T TIGR01880 88 EHWTHPPFSAFKDEDGNIYARGAQDMKCVGVQYLEAVRNLKASGFKFKRTIHISFVPDEEIGGHDGMEKFAKTDEFKALN 167 (400)
T ss_pred ccCccCCccceecCCCeEEEcccccccHHHHHHHHHHHHHHHcCCCCCceEEEEEeCCcccCcHhHHHHHHHhhhccCCc
Confidence 4578899974 4899999999 5 888889999999988764433 9999763 999999887666668
Q ss_pred EEEEEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhc------c---cCC
Q 011730 233 AIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSR------E---ANP 303 (478)
Q Consensus 233 ~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~------~---~~~ 303 (478)
+.++.++....+.+...+. ..++|..+++|+++|+++|++.|. +.||+..|+.++..|+++... . ...
T Consensus 168 ~~~~~d~g~~~~~~~~~i~--~~~kG~~~~~l~v~G~~~Hs~~~~-~~nai~~l~~~i~~l~~~~~~~~~~~~~~~~~~~ 244 (400)
T TIGR01880 168 LGFALDEGLASPDDVYRVF--YAERVPWWVVVTAPGNPGHGSKLM-ENTAMEKLEKSVESIRRFRESQFQLLQSNPDLAI 244 (400)
T ss_pred eEEEEcCCCccccccccee--EEeeEEEEEEEEEecCCCCCCCCC-CCCHHHHHHHHHHHHHHhhHHHHHHHhcCccccc
Confidence 8887753221222211122 223478999999999999999864 469999999999988765211 0 111
Q ss_pred CCCcEEEEEEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHH
Q 011730 304 LDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDED 383 (478)
Q Consensus 304 ~~~~~~~v~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~ 383 (478)
....+++++.|+||...|+||++|++.+|+|+.|.++.+++.++|++++++.. .++++++..... .+...+...+++
T Consensus 245 ~~~~t~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~~~~~i~~~i~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~ 321 (400)
T TIGR01880 245 GDVTSVNLTKLKGGVQSNVIPSEAEAGFDIRLAPSVDFEEMENRLDEWCADAG--EGVTYEFSQHSG-KPLVTPHDDSNP 321 (400)
T ss_pred cccceeecceeccCCcCCcCCCccEEEEEEeeCCCCCHHHHHHHHHHHHhccC--CceEEEEeecCC-CCCCCCCCCCCH
Confidence 12468999999999999999999999999999999999999999999988631 234444432211 111112234679
Q ss_pred HHHHHHHHHHHhcCCCcccccCCCCccchHHHHHH-hcccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHH
Q 011730 384 MYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATI 462 (478)
Q Consensus 384 l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~-~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~ 462 (478)
+++.+++++++. +... .+..+.++||+.++.. .+|++. +|++... ...+|++||+++++++.+++++|+++
T Consensus 322 lv~~l~~a~~~~-~~~~--~~~~~~g~tDa~~~~~~gip~v~--fgp~~~~---~~~aH~~dE~i~i~~l~~~~~~~~~~ 393 (400)
T TIGR01880 322 WWVAFKDAVKEM-GCTF--KPEILPGSTDSRYIRAAGVPALG--FSPMNNT---PVLLHDHNEFLNEAVFLRGIEIYQTL 393 (400)
T ss_pred HHHHHHHHHHHc-CCee--cceeecCcchHHHHHhCCCCeEE--ECCccCC---cccccCCCCceEHHHHHHHHHHHHHH
Confidence 999999999984 5432 2355788999999986 489864 3544311 13599999999999999999999999
Q ss_pred HHHHH
Q 011730 463 AERFL 467 (478)
Q Consensus 463 ~~~ll 467 (478)
+.+|.
T Consensus 394 l~~~~ 398 (400)
T TIGR01880 394 ISALA 398 (400)
T ss_pred HHHhh
Confidence 99875
No 22
>PRK07522 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=7e-44 Score=367.10 Aligned_cols=344 Identities=14% Similarity=0.170 Sum_probs=269.2
Q ss_pred HHHHHHHHHhhcCCCCCcch-HHHHHHHHHHHHhCCCcEEecc----CCceEEEEEcCCCCcEEEEEEccccccCCC--C
Q 011730 98 DWLKSVRRTIHQNPELAFQE-FETSRLLRAELDRMEIGYKYPL----AKTGIRAWVGTGGPPFVALRADMDALPIQE--A 170 (478)
Q Consensus 98 ~~l~~l~~~L~~iPs~s~~E-~~~a~~l~~~L~~~G~~v~~~~----~~~~via~~g~~~~p~v~~~aHlDvVP~~~--~ 170 (478)
.++++++++|++|||+|++| .++++||.++|+++|+++++.. .++|++++++++.+|+|+|+|||||||+++ |
T Consensus 4 ~~~~~~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~nv~a~~~~~~~~~ill~~H~Dtv~~~~~~W 83 (385)
T PRK07522 4 MSSLDILERLVAFDTVSRDSNLALIEWVRDYLAAHGVESELIPDPEGDKANLFATIGPADRGGIVLSGHTDVVPVDGQAW 83 (385)
T ss_pred hhHHHHHHHHhCCCCcCCCccHHHHHHHHHHHHHcCCeEEEEecCCCCcccEEEEeCCCCCCeEEEEeecccccCCCCCC
Confidence 57899999999999999887 4999999999999999976532 357999999654468999999999999854 5
Q ss_pred CCCCcccc-cCCeEEeCcc---hHHHHHHHHHHHHHHhcCCCCC------CCccCC-CcHHHHHHcCC--CCCCcEEEEE
Q 011730 171 VEWEYKSK-VAGKMHACGH---DAHVAMLIGAAKILKSREHLLK------PAEEAG-NGAKRMMADGA--LEDVEAIFAV 237 (478)
Q Consensus 171 ~~~Pf~~~-~~G~~~g~G~---dg~~a~~l~aa~~L~~~~~~l~------~dEE~g-~G~~~l~~~g~--~~~~D~~i~~ 237 (478)
+.+||+.. ++|++||||+ +++++++++|++.|++.+.+.+ +|||.+ .|++.+++... ..++|++++.
T Consensus 84 ~~~pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~~~~~~i~~~~~~dEE~g~~G~~~l~~~~~~~~~~~d~~i~~ 163 (385)
T PRK07522 84 TSDPFRLTERDGRLYGRGTCDMKGFIAAALAAVPELAAAPLRRPLHLAFSYDEEVGCLGVPSMIARLPERGVKPAGCIVG 163 (385)
T ss_pred CCCCCceEEECCEEEeccccccchHHHHHHHHHHHHHhCCCCCCEEEEEEeccccCCccHHHHHHHhhhcCCCCCEEEEc
Confidence 67899985 5899999997 4999999999999987643222 999976 69999987532 1247999988
Q ss_pred ecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhcccC--C----C--CCcEE
Q 011730 238 HVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREAN--P----L--DSQVV 309 (478)
Q Consensus 238 ~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~~~~--~----~--~~~~~ 309 (478)
+|+.. .+. .+ ..|..+++|+++|+++|+|.|+.|.||+..++++|..|+++..+... + + ...++
T Consensus 164 ep~~~----~~~--~~--~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~ 235 (385)
T PRK07522 164 EPTSM----RPV--VG--HKGKAAYRCTVRGRAAHSSLAPQGVNAIEYAARLIAHLRDLADRLAAPGPFDALFDPPYSTL 235 (385)
T ss_pred cCCCC----eee--ee--ecceEEEEEEEEeeccccCCCccCcCHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCccee
Confidence 87542 121 12 23788999999999999999999999999999999999887432211 1 1 13578
Q ss_pred EEEEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHH------HHhhcCCeeEEEEecCCCCCCCCccC--C
Q 011730 310 SVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVE------QARVFRCSATVDFFDKGNTVYPPTVN--D 381 (478)
Q Consensus 310 ~v~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~------~~~~~g~~~ev~~~~~~~~~~~~~~~--d 381 (478)
+++.|+||...|+||++|++.+++|+.|.++.+++.++|++.+++ .+...+++++++... .++++.. +
T Consensus 236 ~i~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~~ 311 (385)
T PRK07522 236 QTGTIQGGTALNIVPAECEFDFEFRNLPGDDPEAILARIRAYAEAELLPEMRAVHPEAAIEFEPLS----AYPGLDTAED 311 (385)
T ss_pred EEeeeecCccccccCCceEEEEEEccCCCCCHHHHHHHHHHHHHhhcchhhhhhcCCCcEEEEecc----CCCCCCCCCC
Confidence 999999999999999999999999999999999999999999987 234456677665542 3444443 4
Q ss_pred HHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHH-hcccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHH
Q 011730 382 EDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHA 460 (478)
Q Consensus 382 ~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~-~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a 460 (478)
+++++.+++++ +..+ .....+++|.++|.. .+|++. +|++.. ..+|++||+++++++.+++++|+
T Consensus 312 ~~~v~~~~~~~----~~~~---~~~~~~~td~~~~~~~gip~v~--~Gpg~~-----~~~H~~~E~i~i~~l~~~~~~~~ 377 (385)
T PRK07522 312 AAAARLVRALT----GDND---LRKVAYGTEAGLFQRAGIPTVV--CGPGSI-----EQAHKPDEFVELAQLAACEAFLR 377 (385)
T ss_pred cHHHHHHHHHh----CCCC---cceEeeecchHHhccCCCCEEE--ECCCCh-----hhCCCCCccccHHHHHHHHHHHH
Confidence 77888877654 4322 123457899999976 488865 465532 36999999999999999999999
Q ss_pred HHHHHHH
Q 011730 461 TIAERFL 467 (478)
Q Consensus 461 ~~~~~ll 467 (478)
+++.++.
T Consensus 378 ~~~~~~~ 384 (385)
T PRK07522 378 RLLASLA 384 (385)
T ss_pred HHHHHHh
Confidence 9998764
No 23
>PRK06446 hypothetical protein; Provisional
Probab=100.00 E-value=1.9e-43 Score=369.40 Aligned_cols=355 Identities=14% Similarity=0.165 Sum_probs=269.6
Q ss_pred HHHHHHHHHhhcCCCCCcc-h--HHHHHHHHHHHHhCCCcEEecc--CCceEEEEEcCCCCcEEEEEEccccccCC---C
Q 011730 98 DWLKSVRRTIHQNPELAFQ-E--FETSRLLRAELDRMEIGYKYPL--AKTGIRAWVGTGGPPFVALRADMDALPIQ---E 169 (478)
Q Consensus 98 ~~l~~l~~~L~~iPs~s~~-E--~~~a~~l~~~L~~~G~~v~~~~--~~~~via~~g~~~~p~v~~~aHlDvVP~~---~ 169 (478)
.++++++++|++|||++++ | .++++||.++|+++||+++... +++|++++++.+.+|+|+|+|||||||++ .
T Consensus 2 ~~~~~~l~eLV~i~S~s~~~~~~~~~a~~l~~~l~~~G~~ve~~~~~~~~~lia~~~~~~~~~vll~gH~DvVp~~~~~~ 81 (436)
T PRK06446 2 DEELYTLIEFLKKPSISATGEGIEETANYLKDTMEKLGIKANIERTKGHPVVYGEINVGAKKTLLIYNHYDVQPVDPLSE 81 (436)
T ss_pred hhHHHHHHHHhCCCCCCCCcHhHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCEEEEEecccCCCCCcccc
Confidence 4678999999999999964 3 6899999999999999986532 56789999865446899999999999974 4
Q ss_pred CCCCCcccc-cCCeEEeCcc-h--HHHHHHHHHHHHHHhcC-CCCC------CCccCCC-cHHHHHHcC--CCCCCcEEE
Q 011730 170 AVEWEYKSK-VAGKMHACGH-D--AHVAMLIGAAKILKSRE-HLLK------PAEEAGN-GAKRMMADG--ALEDVEAIF 235 (478)
Q Consensus 170 ~~~~Pf~~~-~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~-~~l~------~dEE~g~-G~~~l~~~g--~~~~~D~~i 235 (478)
|+.+||++. ++|++||||+ | ++++++|.|++.+++.. .... +|||.|+ |.+.++++. .+ ++|++|
T Consensus 82 W~~~Pf~~~~~dg~lyGRGa~DmKgglaa~l~A~~~l~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~-~~d~vi 160 (436)
T PRK06446 82 WKRDPFSATIENGRIYARGASDNKGTLMARLFAIKHLIDKHKLNVNVKFLYEGEEEIGSPNLEDFIEKNKNKL-KADSVI 160 (436)
T ss_pred ccCCCCceEEECCEEEEEeccCCcHHHHHHHHHHHHHHHcCCCCCCEEEEEEcccccCCHhHHHHHHHHHHHh-CCCEEE
Confidence 678899975 5899999998 3 88888888888886543 2212 9999774 777777652 23 468877
Q ss_pred EEecCCCCCcceEEeecccccceeeEEEEEEEe--ecCCCCCCCCCCCHHHHHHHHHHHHHhhhhcc-------------
Q 011730 236 AVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISG--KKGGAANPHRSVDPVLAASAAVISLQGLVSRE------------- 300 (478)
Q Consensus 236 ~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G--~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~~------------- 300 (478)
.+++...+.+...+..+ ++|..+++++++| +++|+|.|+.|.||+..|+++|.+|.+.....
T Consensus 161 -~E~~~~~~~~~~~i~~~--~kG~~~~~l~v~G~~~~~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 237 (436)
T PRK06446 161 -MEGAGLDPKGRPQIVLG--VKGLLYVELVLRTGTKDLHSSNAPIVRNPAWDLVKLLSTLVDGEGRVLIPGFYDDVRELT 237 (436)
T ss_pred -ECCCCccCCCCeEEEEe--cCeEEEEEEEEEeCCCCCCCCCCccCCCHHHHHHHHHHhhCCCCCCEEccchhcCCCCCC
Confidence 47765433342222333 2488999999999 99999999999999999999999997541000
Q ss_pred ---------------------------c--------CCCCCcEEEEEEEeCC----CccceecCcEEEEEEEeccChHhH
Q 011730 301 ---------------------------A--------NPLDSQVVSVTYFNGG----DHLDMIPDAVVIGGTLRAFSNTSF 341 (478)
Q Consensus 301 ---------------------------~--------~~~~~~~~~v~~i~gG----~~~NvIP~~a~~~~diR~~p~~~~ 341 (478)
. ..+...++|++.+.|| ...|+||++|++++|+|++|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~nv~~i~~g~~~~~~~nvvP~~a~~~~d~R~~p~~~~ 317 (436)
T PRK06446 238 EEERELLKKYDIDVEELRKALGFKELKYSDREKIAEALLTEPTCNIDGFYSGYTGKGSKTIVPSRAFAKLDFRLVPNQDP 317 (436)
T ss_pred HHHHHHHHhCCCCHHHHHHHhCCccccCCCcccHHHHHHhCCcEEEeeeeccccCCCCCcEecCceEEEEEEEcCCCCCH
Confidence 0 0012367899999887 467999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHH--h
Q 011730 342 YQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE--V 419 (478)
Q Consensus 342 ~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~--~ 419 (478)
+++.+.|++++++. +.++++.+... .++ ..+..++++++.+++++++++|.++.. .....|++|+++|.+ .
T Consensus 318 ~~v~~~l~~~~~~~----~~~~~~~~~~~-~~p-~~~~~~~~~v~~l~~a~~~~~g~~~~~-~~~~~g~~d~~~~~~~~g 390 (436)
T PRK06446 318 YKIFELLKKHLQKV----GFNGEIIVHGF-EYP-VRTSVNSKVVKAMIESAKRVYGTEPVV-IPNSAGTQPMGLFVYKLG 390 (436)
T ss_pred HHHHHHHHHHHHHc----CCCeEEEEcCC-cce-eecCCCCHHHHHHHHHHHHHhCCCCce-ecCCCCcchHHHHHHHhC
Confidence 99999999998863 34556655431 111 123457899999999999988876531 123346678888865 4
Q ss_pred cccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHH
Q 011730 420 VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFL 467 (478)
Q Consensus 420 iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll 467 (478)
+|++.+.+|++++. .++|++||+|+++++.+++++|.+++.++.
T Consensus 391 ip~v~~~~g~g~~~----~~~H~~dE~i~i~~l~~~~~~~~~~~~~~~ 434 (436)
T PRK06446 391 IRDIVSAIGVGGYY----SNAHAPNENIRIDDYYKAIKHTEEFLKLYS 434 (436)
T ss_pred CCcceeecccCCCC----cCCcCCCCCcCHHHHHHHHHHHHHHHHHhc
Confidence 89876555665432 479999999999999999999999998764
No 24
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=100.00 E-value=2e-43 Score=360.86 Aligned_cols=333 Identities=17% Similarity=0.225 Sum_probs=261.6
Q ss_pred HHHHHhhcCCCCCcch-HHHHHHHHHHHHhCCCcEEecc-----CCceEEEEEcCCCCcEEEEEEccccccCCC--CCCC
Q 011730 102 SVRRTIHQNPELAFQE-FETSRLLRAELDRMEIGYKYPL-----AKTGIRAWVGTGGPPFVALRADMDALPIQE--AVEW 173 (478)
Q Consensus 102 ~l~~~L~~iPs~s~~E-~~~a~~l~~~L~~~G~~v~~~~-----~~~~via~~g~~~~p~v~~~aHlDvVP~~~--~~~~ 173 (478)
+++++|++|||++++| .++++||.++|+++|++++... .++|+++++++.++|+|+|+|||||||.++ |+.+
T Consensus 1 ~~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~nl~~~~~~~~~~~i~l~~H~Dtvp~~~~~w~~~ 80 (364)
T TIGR01892 1 EILTKLVAFDSTSFRPNVDLIDWAQAYLEALGFSVEVQPFPDGAEKSNLVAVIGPSGAGGLALSGHTDVVPYDDAAWTRD 80 (364)
T ss_pred ChHHHhhCcCCcCCccHHHHHHHHHHHHHHcCCeEEEEeCCCCCccccEEEEecCCCCCeEEEEcccccccCCCCcCCCC
Confidence 4678999999999865 7999999999999999976532 357999999653468999999999999853 5678
Q ss_pred Cccc-ccCCeEEeCcc---hHHHHHHHHHHHHHHhcCCCCC------CCccCC-CcHHHHHHcCCCCCCcEEEEEecCCC
Q 011730 174 EYKS-KVAGKMHACGH---DAHVAMLIGAAKILKSREHLLK------PAEEAG-NGAKRMMADGALEDVEAIFAVHVSHE 242 (478)
Q Consensus 174 Pf~~-~~~G~~~g~G~---dg~~a~~l~aa~~L~~~~~~l~------~dEE~g-~G~~~l~~~g~~~~~D~~i~~~~~~~ 242 (478)
||+. .++|++||||. +++++++|+++++|++.+.+.+ ++||.+ .|++.+++++.+ ..|++++.+|+..
T Consensus 81 Pf~~~~~~~~i~GrG~~D~Kg~~a~~l~a~~~l~~~~~~~~v~~~~~~~EE~g~~G~~~~~~~~~~-~~d~~i~~ep~~~ 159 (364)
T TIGR01892 81 PFRLTEKDGRLYGRGTCDMKGFLACALAAAPDLAAEQLKKPLHLALTADEEVGCTGAPKMIEAGAG-RPRHAIIGEPTRL 159 (364)
T ss_pred CCcceeeCCEEEecCccccchHHHHHHHHHHHHHhcCcCCCEEEEEEeccccCCcCHHHHHHhcCC-CCCEEEECCCCCc
Confidence 9996 46799999994 5899999999999987532222 999976 699999998753 5799998886542
Q ss_pred CCcceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhccc-----CCC--CCcEEEEEEEe
Q 011730 243 HPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREA-----NPL--DSQVVSVTYFN 315 (478)
Q Consensus 243 ~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~~~-----~~~--~~~~~~v~~i~ 315 (478)
.+. .+ .+|..+++|+++|+++|++.|+.|.||+..+++++.+|+++..... .++ ...+++++.|+
T Consensus 160 ----~~~--~~--~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 231 (364)
T TIGR01892 160 ----IPV--RA--HKGYASAEVTVRGRSGHSSYPDSGVNAIFRAGRFLQRLVHLADTLLREDLDEGFTPPYTTLNIGVIQ 231 (364)
T ss_pred ----eeE--Ee--eceEEEEEEEEEcccccccCCccCcCHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCceEEEeeee
Confidence 111 12 2378899999999999999999999999999999999987642111 111 24689999999
Q ss_pred CCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHh-hcCCeeEEEEecCCCCCCCC--ccCCHHHHHHHHHHH
Q 011730 316 GGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQAR-VFRCSATVDFFDKGNTVYPP--TVNDEDMYEHVKKVA 392 (478)
Q Consensus 316 gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~-~~g~~~ev~~~~~~~~~~~~--~~~d~~l~~~~~~~~ 392 (478)
||...|+||++|++.+|+|++|.++.+++.++|++++++.+. ..+++++++... .+++ +..++++++.++++
T Consensus 232 gg~~~nviP~~~~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~~~~~v~~~~~~- 306 (364)
T TIGR01892 232 GGKAVNIIPGACEFVFEWRPIPGMDPEELLQLLETIAQALVRDEPGFEVQIEVVS----TDPGVNTEPDAELVAFLEEL- 306 (364)
T ss_pred cCCCCcccCCeEEEEEEeecCCCCCHHHHHHHHHHHHHHHHhhCCCceEEEEEcc----CCCCcCCCCCCHHHHHHHHH-
Confidence 999999999999999999999999999999999999988653 446677766542 2233 34567888877654
Q ss_pred HHhcCCCcccccCCCCccchHHHHHHh-cccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHH
Q 011730 393 IDLLGPMNYRVVPPMMGAEDFSFYSEV-VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATI 462 (478)
Q Consensus 393 ~~~~G~~~~~~~~~~~g~tD~~~~~~~-iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~ 462 (478)
+|.++ ...++++|+.+|... +|++. +|++.. ..+|++||+++++++.+++++|+.+
T Consensus 307 ---~~~~~----~~~~~~tD~~~~~~~gip~v~--~Gpg~~-----~~~H~~~E~i~i~~l~~~~~~~~~~ 363 (364)
T TIGR01892 307 ---SGNAP----EVVSYGTEAPQFQELGAEAVV--CGPGDI-----RQAHQPDEYVEIEDLVRCRAVLARL 363 (364)
T ss_pred ---hCCCC----ceecccccHHHHHhCCCcEEE--ECCCCh-----HhCCCCCceeeHHHHHHHHHHHHHh
Confidence 35432 234668999999764 89865 455432 3699999999999999999999876
No 25
>PRK08652 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=7.5e-43 Score=354.36 Aligned_cols=332 Identities=15% Similarity=0.113 Sum_probs=261.8
Q ss_pred HHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEeccC--CceEEEEEcCCCCcEEEEEEccccccCCCCCCCCc
Q 011730 98 DWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLA--KTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEY 175 (478)
Q Consensus 98 ~~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~--~~~via~~g~~~~p~v~~~aHlDvVP~~~~~~~Pf 175 (478)
+++++++++|++|||+|++|.++++||.++|+++||+++.... ..|+++ +++|+|+|+|||||||.+. .|+
T Consensus 2 ~~~~~~~~~lv~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~----~~~~~i~l~~H~D~vp~~~---~~~ 74 (347)
T PRK08652 2 ERAKELLKQLVKIPSPSGQEDEIALHIMEFLESLGYDVHIESDGEVINIVV----NSKAELFVEVHYDTVPVRA---EFF 74 (347)
T ss_pred hhHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCEEEEEecCceeEEEc----CCCCEEEEEccccccCCCC---CCE
Confidence 5688999999999999999999999999999999999876432 245554 3368999999999999742 232
Q ss_pred ccccCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC------CCccCC-CcHHHHHHcCCCCCCcEEEEEecCCCCCc
Q 011730 176 KSKVAGKMHACGH-D--AHVAMLIGAAKILKSREHLLK------PAEEAG-NGAKRMMADGALEDVEAIFAVHVSHEHPT 245 (478)
Q Consensus 176 ~~~~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~------~dEE~g-~G~~~l~~~g~~~~~D~~i~~~~~~~~~~ 245 (478)
.++|++||||+ | +++++++.|++.|++...+.. +|||.+ .|++.+++.. ..|++|+.+|+..
T Consensus 75 --~~~g~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~v~~~~~~dEE~g~~G~~~~~~~~---~~d~~i~~ep~~~--- 146 (347)
T PRK08652 75 --VDGVYVYGTGACDAKGGVAAILLALEELGKEFEDLNVGIAFVSDEEEGGRGSALFAERY---RPKMAIVLEPTDL--- 146 (347)
T ss_pred --EECCEEEeccchhhhHHHHHHHHHHHHHhhcccCCCEEEEEecCcccCChhHHHHHHhc---CCCEEEEecCCCC---
Confidence 35799999997 3 889999999998875433222 999976 5899888762 3589999987632
Q ss_pred ceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhcccCCCCCcEEEEEEEeCCCccceecC
Q 011730 246 GVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPD 325 (478)
Q Consensus 246 g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~v~~i~gG~~~NvIP~ 325 (478)
.+.. + .+|..+++|+++|+++|++.|+.|.||+..+++++..|+++.......+. ..++++.++||...|+||+
T Consensus 147 -~i~~--~--~~g~~~~~i~~~G~~~H~s~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~~-~~~~~~~i~gg~~~nviP~ 220 (347)
T PRK08652 147 -KVAI--A--HYGNLEAYVEVKGKPSHGACPESGVNAIEKAFEMLEKLKELLKALGKYFD-PHIGIQEIIGGSPEYSIPA 220 (347)
T ss_pred -ceee--e--cccEEEEEEEEEeeecccCCCCcCcCHHHHHHHHHHHHHHHHHhhhcccC-CCCcceeeecCCCCCccCC
Confidence 2222 2 24788999999999999999999999999999999999887433211122 2467778999999999999
Q ss_pred cEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCcccccC
Q 011730 326 AVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVP 405 (478)
Q Consensus 326 ~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~ 405 (478)
+|++.+|+|++|.++.+++.++|++++++ +++++++.... +. ..+..|+++++.+++++++. |.++. +.
T Consensus 221 ~~~~~~diR~~~~~~~~~v~~~i~~~~~~----~~v~~~~~~~~---~~-~~~~~~~~lv~~l~~a~~~~-g~~~~--~~ 289 (347)
T PRK08652 221 LCRLRLDARIPPEVEVEDVLDEIDPILDE----YTVKYEYTEIW---DG-FELDEDEEIVQLLEKAMKEV-GLEPE--FT 289 (347)
T ss_pred cEEEEEEEEcCCCCCHHHHHHHHHHHHHh----cCceEEEeccC---Cc-ccCCCCCHHHHHHHHHHHHh-CCCCC--cC
Confidence 99999999999999999999999998865 34555443221 22 23456789999999999986 87653 35
Q ss_pred CCCccchHHHHHHh-cccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHHh
Q 011730 406 PMMGAEDFSFYSEV-VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 468 (478)
Q Consensus 406 ~~~g~tD~~~~~~~-iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll~ 468 (478)
.+++++|+.+|... +|++. +|++.. ..+|++||+++++++.+++++|.+++.+||+
T Consensus 290 ~~~g~tDa~~~~~~gip~v~--~Gpg~~-----~~~H~~nE~i~i~~l~~~~~~l~~~~~~~~~ 346 (347)
T PRK08652 290 VMRSWTDAINFRYNGTKTVV--WGPGEL-----DLCHTKFERIDVREVEKAKEFLKALNEILLE 346 (347)
T ss_pred cCCccchhHHHHHCCCCEEE--ECCCch-----hhcCCCCceeeHHHHHHHHHHHHHHHHHHhc
Confidence 56789999999764 88865 465532 4699999999999999999999999999875
No 26
>PRK09133 hypothetical protein; Provisional
Probab=100.00 E-value=8.2e-43 Score=368.32 Aligned_cols=356 Identities=16% Similarity=0.158 Sum_probs=271.6
Q ss_pred cchHHHHHHHHHHhhcCCCCC--cchHHHHHHHHHHHHhCCCcEE---ec---cCCceEEEEEc-CCCCcEEEEEEcccc
Q 011730 94 PETVDWLKSVRRTIHQNPELA--FQEFETSRLLRAELDRMEIGYK---YP---LAKTGIRAWVG-TGGPPFVALRADMDA 164 (478)
Q Consensus 94 ~~~~~~l~~l~~~L~~iPs~s--~~E~~~a~~l~~~L~~~G~~v~---~~---~~~~~via~~g-~~~~p~v~~~aHlDv 164 (478)
...++++++++++|++|||++ ++|.++++||.++|+++||+++ .. ..+.|++++++ ++++|+|+|++||||
T Consensus 33 ~~~~~~~~~~l~~Lv~i~S~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~nli~~~~g~~~~~~lll~~H~Dt 112 (472)
T PRK09133 33 TADQQAARDLYKELIEINTTASTGSTTPAAEAMAARLKAAGFADADIEVTGPYPRKGNLVARLRGTDPKKPILLLAHMDV 112 (472)
T ss_pred chhHHHHHHHHHHHhccCCCCCCcchHHHHHHHHHHHHHcCCCceEEEeccCCCCceeEEEEecCCCCCCcEEEEeeccc
Confidence 345788999999999999998 6789999999999999999753 21 24679999984 344589999999999
Q ss_pred ccCC--CCCCCCcccc-cCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC--------CCcc-CC-CcHHHHHHcCC-
Q 011730 165 LPIQ--EAVEWEYKSK-VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLK--------PAEE-AG-NGAKRMMADGA- 227 (478)
Q Consensus 165 VP~~--~~~~~Pf~~~-~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~--------~dEE-~g-~G~~~l~~~g~- 227 (478)
||++ .|+.+||++. ++|++||||+ | ++++++|.+++.|++.+..++ +||| .+ .|++.+++...
T Consensus 113 Vp~~~~~W~~dPf~~~~~dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~g~~G~~~l~~~~~~ 192 (472)
T PRK09133 113 VEAKREDWTRDPFKLVEENGYFYGRGTSDDKADAAIWVATLIRLKREGFKPKRDIILALTGDEEGTPMNGVAWLAENHRD 192 (472)
T ss_pred CCCChhcCCCCCCcceEeCCEEEecCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCccchHHHHHHHHhh
Confidence 9985 4678899986 5799999998 4 889999999999987654332 9999 55 58888887632
Q ss_pred CCCCcEEEEEecCC------CCCcceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhcc-
Q 011730 228 LEDVEAIFAVHVSH------EHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSRE- 300 (478)
Q Consensus 228 ~~~~D~~i~~~~~~------~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~~- 300 (478)
.-+.|++|+ +++. +.|.. ..+..| .+|..+++|+++|+++|+|.|+ +.|||..++++|.+|+.+..+.
T Consensus 193 ~~~~~~~i~-e~~~~~~~~~gept~-~~i~~g--~kG~~~~~i~v~G~~~Hss~p~-~~nAi~~l~~~l~~l~~~~~~~~ 267 (472)
T PRK09133 193 LIDAEFALN-EGGGGTLDEDGKPVL-LTVQAG--EKTYADFRLEVTNPGGHSSRPT-KDNAIYRLAAALSRLAAYRFPVM 267 (472)
T ss_pred ccCeEEEEE-CCCccccCCCCCceE-EEeeee--cceeEEEEEEEecCCCCCCCCC-CCChHHHHHHHHHHHhhCCCCCc
Confidence 124688888 7653 22211 112223 3488999999999999999997 5899999999999997641100
Q ss_pred -----------------------------------------cCC----CCCcEEEEEEEeCCCccceecCcEEEEEEEec
Q 011730 301 -----------------------------------------ANP----LDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRA 335 (478)
Q Consensus 301 -----------------------------------------~~~----~~~~~~~v~~i~gG~~~NvIP~~a~~~~diR~ 335 (478)
..+ ....+++++.|+||...|+||++|++.+|+|+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gG~~~NvVP~~a~~~lDiR~ 347 (472)
T PRK09133 268 LNDVTRAYFKQSAAIETGPLAAAMRAFAANPADEAAIALLSADPSYNAMLRTTCVATMLEGGHAENALPQRATANVNCRI 347 (472)
T ss_pred cCCccHHHHHHHHHhCCchHHHHHHHHhcCcchHHHHHHHhcCcchhheeeeeEEeeEEecCCcCccCCCceEEEEEEEe
Confidence 001 13468899999999999999999999999999
Q ss_pred cChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhc-CCCcccccCCCCccchHH
Q 011730 336 FSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLL-GPMNYRVVPPMMGAEDFS 414 (478)
Q Consensus 336 ~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-G~~~~~~~~~~~g~tD~~ 414 (478)
+|+++.+++.++|++++++ ..++++..... ...++...++++++.+++++++.+ |... .+..++++||+.
T Consensus 348 ~p~~~~e~v~~~I~~~i~~------~~v~v~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~g~~~--~~~~~~ggtDa~ 418 (472)
T PRK09133 348 FPGDTIEAVRATLKQVVAD------PAIKITRIGDP-SPSPASPLRPDIMKAVEKLTAAMWPGVPV--IPSMSTGATDGR 418 (472)
T ss_pred CCchhHHHHHHHHHHHhcC------CCEEEEEccCC-CCCCCCCCCcHHHHHHHHHHHHHCCCCce--eccccccccchH
Confidence 9999999999999998864 23444433211 122345567889999999999877 4432 235678899999
Q ss_pred HHHH-hcccceEE--ecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHHh
Q 011730 415 FYSE-VVPAAFYY--IGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 468 (478)
Q Consensus 415 ~~~~-~iP~~~~~--~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll~ 468 (478)
++.. .+|++.+. +|++. ...+|++||+++++++.+++++|++++.+|++
T Consensus 419 ~~~~~gip~~~~~~i~gp~~-----~~~aH~~dE~v~i~~l~~~~~~l~~~l~~l~~ 470 (472)
T PRK09133 419 YLRAAGIPTYGVSGLFGDPD-----DTFAHGLNERIPVASFYEGRDFLYELVKDLAG 470 (472)
T ss_pred HHHhcCCCceeecCcccCcc-----cccCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 9976 48875321 23322 24699999999999999999999999998864
No 27
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=100.00 E-value=9.4e-43 Score=353.77 Aligned_cols=330 Identities=13% Similarity=0.125 Sum_probs=260.8
Q ss_pred chHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEeccCCceEEEEEcCCCCcEEEEEEccccccCCCCCCCC
Q 011730 95 ETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWE 174 (478)
Q Consensus 95 ~~~~~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~g~~~~p~v~~~aHlDvVP~~~~~~~P 174 (478)
.+.+++++++++|++|||++++|.++++||.++|+++||+++.... .|++. . + .|+|+|+||+||||. +
T Consensus 7 ~~~~~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~~~-~~~~~-~--g-~~~lll~gH~DtVp~------~ 75 (346)
T PRK00466 7 LVKQKAKELLLDLLSIYTPSGNETNATKFFEKISNELNLKLEILPD-SNSFI-L--G-EGDILLASHVDTVPG------Y 75 (346)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCeEEEecC-CCcEe-c--C-CCeEEEEeccccCCC------C
Confidence 3457899999999999999999999999999999999999876433 35543 1 2 468999999999994 2
Q ss_pred ccc-ccCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC----CCccCC-CcHHHHHHcCCCCCCcEEEEEecCCCCCc
Q 011730 175 YKS-KVAGKMHACGH-D--AHVAMLIGAAKILKSREHLLK----PAEEAG-NGAKRMMADGALEDVEAIFAVHVSHEHPT 245 (478)
Q Consensus 175 f~~-~~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~----~dEE~g-~G~~~l~~~g~~~~~D~~i~~~~~~~~~~ 245 (478)
|.+ .++|++||||. | +++++++.|+++|++.+..+. +|||.+ .|++.+++.+. ++|++++.+|+..
T Consensus 76 ~~~~~~~g~iyGrG~~DmKgg~aa~l~a~~~l~~~~~~i~~~~~~dEE~g~~G~~~l~~~~~--~~d~~i~~ep~~~--- 150 (346)
T PRK00466 76 IEPKIEGEVIYGRGAVDAKGPLISMIIAAWLLNEKGIKVMVSGLADEESTSIGAKELVSKGF--NFKHIIVGEPSNG--- 150 (346)
T ss_pred CCceeeCCEEEecCccccchHHHHHHHHHHHHHHcCCCEEEEEEcCcccCCccHHHHHhcCC--CCCEEEEcCCCCC---
Confidence 444 35799999997 3 888888899999987764433 999976 59999998863 5899999887641
Q ss_pred ceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhcccCCCCCcEEEEEEEeCCCccceecC
Q 011730 246 GVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPD 325 (478)
Q Consensus 246 g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~v~~i~gG~~~NvIP~ 325 (478)
..+ ..+ .+|..+++|+++|+++|+|.|+ .||+..|++++.+|.+... .+...+++++.++||...|+||+
T Consensus 151 ~~i--~~~--~kG~~~~~i~v~G~~~Has~p~--~nAi~~~~~~l~~l~~~~~----~~~~~t~~~~~i~gG~~~NvvP~ 220 (346)
T PRK00466 151 TDI--VVE--YRGSIQLDIMCEGTPEHSSSAK--SNLIVDISKKIIEVYKQPE----NYDKPSIVPTIIRAGESYNVTPA 220 (346)
T ss_pred Cce--EEE--eeEEEEEEEEEEeeccccCCCC--cCHHHHHHHHHHHHHhccc----cCCCCcceeeEEecCCcCcccCC
Confidence 112 222 3478999999999999999986 5999999999999876421 22346789999999999999999
Q ss_pred cEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCcccccC
Q 011730 326 AVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVP 405 (478)
Q Consensus 326 ~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~ 405 (478)
+|++.+|+|+.|.++.+++.++|++++++ +++++... .++ ..+..++++++.+.+++++ +|.++. ..
T Consensus 221 ~a~~~~diR~~p~~~~~~v~~~i~~~~~~------~~~~~~~~---~~~-~~~~~~~~lv~~l~~a~~~-~g~~~~--~~ 287 (346)
T PRK00466 221 KLYLHFDVRYAINNKRDDLISEIKDKFQE------CGLKIVDE---TPP-VKVSINNPVVKALMRALLK-QNIKPR--LV 287 (346)
T ss_pred ceEEEEEEEeCCCCCHHHHHHHHHHHHhh------CcEeeccC---CCC-cccCCCCHHHHHHHHHHHH-hCCCce--EE
Confidence 99999999999999999999999988875 34433211 121 2334568999999999998 477542 34
Q ss_pred CCCccchHHHHHHhcccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHHhh
Q 011730 406 PMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 469 (478)
Q Consensus 406 ~~~g~tD~~~~~~~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll~~ 469 (478)
.++|++|+++|.+..|.++ .+|++.. ..+|++||+++++++.+++++|++++.+|+++
T Consensus 288 ~~~g~tD~~~~~~~~~~~v-~fGpg~~-----~~aH~~nE~i~i~~l~~~~~~~~~~i~~l~~~ 345 (346)
T PRK00466 288 RKAGTSDMNILQKITTSIA-TYGPGNS-----MLEHTNQEKITLDEIYIAVKTYMLAIEELWQK 345 (346)
T ss_pred ecCCcCcHHHHHHhCCCEE-EECCCCc-----ccccCCCceeeHHHHHHHHHHHHHHHHHHHhc
Confidence 5678999999988655443 3566542 46999999999999999999999999999876
No 28
>PRK08201 hypothetical protein; Provisional
Probab=100.00 E-value=2.3e-42 Score=363.45 Aligned_cols=366 Identities=16% Similarity=0.142 Sum_probs=272.0
Q ss_pred HHHHHHhcCcchHHHHHHHHHHhhcCCCCCc------chHHHHHHHHHHHHhCCCc-EEec--cCCceEEEEEc-CCCCc
Q 011730 85 KEVMELARRPETVDWLKSVRRTIHQNPELAF------QEFETSRLLRAELDRMEIG-YKYP--LAKTGIRAWVG-TGGPP 154 (478)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~l~~~L~~iPs~s~------~E~~~a~~l~~~L~~~G~~-v~~~--~~~~~via~~g-~~~~p 154 (478)
+++.+++ ++.++++++++++|++|||+++ +|.++++||.++|+++||+ ++.. .++.|+++++. .+++|
T Consensus 3 ~~~~~~~--~~~~~~~~~~l~~LV~i~Svs~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~~~~~~~~ 80 (456)
T PRK08201 3 QQVEAYL--RERREAHLEELKEFLRIPSISALSEHKEDVRKAAEWLAGALEKAGLEHVEIMETAGHPIVYADWLHAPGKP 80 (456)
T ss_pred hHHHHHH--HHHHHHHHHHHHHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCeEEEEecCCCCEEEEEecCCCCCC
Confidence 5778888 8889999999999999999985 5678999999999999997 4432 24568999873 33468
Q ss_pred EEEEEEccccccCCC---CCCCCcccc-cCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC--------CCccCC-Cc
Q 011730 155 FVALRADMDALPIQE---AVEWEYKSK-VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLK--------PAEEAG-NG 218 (478)
Q Consensus 155 ~v~~~aHlDvVP~~~---~~~~Pf~~~-~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~--------~dEE~g-~G 218 (478)
+|+|+||+||||+++ |+.+||... ++|++||||+ | +++++++.|++.+++.+..++ .|||.+ .|
T Consensus 81 ~lll~gH~DvVp~~~~~~W~~dPf~~~~~~g~lyGRG~~DmKgglaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g 160 (456)
T PRK08201 81 TVLIYGHYDVQPVDPLNLWETPPFEPTIRDGKLYARGASDDKGQVFMHLKAVEALLKVEGTLPVNVKFCIEGEEEIGSPN 160 (456)
T ss_pred EEEEEeccCCcCCCchhcccCCCCceEeECCEEEEEecccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccCCcc
Confidence 999999999999864 678899975 5799999998 3 888899999988876543322 999976 47
Q ss_pred HHHHHHcCC-CCCCcEEEEEecCCCCCcceEEeecccccceeeEEEEEEEeecC--CCCCCC-CCCCHHHHHHHHHHHHH
Q 011730 219 AKRMMADGA-LEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKG--GAANPH-RSVDPVLAASAAVISLQ 294 (478)
Q Consensus 219 ~~~l~~~g~-~~~~D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~--Has~p~-~g~NAi~~~~~~i~~l~ 294 (478)
...++++.. .-..|++|+.+++...+. ...+..| ++|..+++|+++|+++ |||.|. .+.|||..|+++|.+|+
T Consensus 161 ~~~~l~~~~~~~~~d~~ii~e~~~~~~~-~~~i~~g--~kG~~~~~l~v~G~~~~~Hs~~~~~~~~nAi~~~~~~l~~l~ 237 (456)
T PRK08201 161 LDSFVEEEKDKLAADVVLISDTTLLGPG-KPAICYG--LRGLAALEIDVRGAKGDLHSGLYGGAVPNALHALVQLLASLH 237 (456)
T ss_pred HHHHHHhhHHhccCCEEEEeCCCcCCCC-CEEEEEe--cCCeEEEEEEEEeCCCCCccccccCcCCCHHHHHHHHHHhcC
Confidence 777776531 114699999997643221 1112223 3489999999999998 999755 45799999999999997
Q ss_pred hhhhcc-----------------------------------cCC-C------------CCcEEEEEEEeCCCc----cce
Q 011730 295 GLVSRE-----------------------------------ANP-L------------DSQVVSVTYFNGGDH----LDM 322 (478)
Q Consensus 295 ~l~~~~-----------------------------------~~~-~------------~~~~~~v~~i~gG~~----~Nv 322 (478)
++..+. ..+ + ...+++++.|.||.. .|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~~~Nv 317 (456)
T PRK08201 238 DEHGTVAVEGFYDGVRPLTPEEREEFAALGFDEEKLKRELGVDELFGEEGYTALERTWARPTLELNGVYGGFQGEGTKTV 317 (456)
T ss_pred CCCCCEecCCcccCCCCCCHHHHHHHHhCCCCHHHHHhhcCCccccCCcchHHHHHHHhCCcEEEEeeecCCCCCCCceE
Confidence 532100 000 0 134789999988754 799
Q ss_pred ecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCccc
Q 011730 323 IPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYR 402 (478)
Q Consensus 323 IP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~ 402 (478)
||++|++.+|+|++|+++.+++.+.|++++++.. ..+.++++..... .++ ..+..++++++.+.+++++++|.++.
T Consensus 318 VP~~a~~~~diR~~p~~~~e~v~~~i~~~l~~~~-~~~~~v~~~~~~~-~~~-~~~~~~~~~~~~l~~a~~~~~g~~~~- 393 (456)
T PRK08201 318 IPAEAHAKITCRLVPDQDPQEILDLIEAHLQAHT-PAGVRVTIRRFDK-GPA-FVAPIDHPAIQAAARAYEAVYGTEAA- 393 (456)
T ss_pred ECcceEEEEEEEeCCCCCHHHHHHHHHHHHHHhC-CCCeEEEEEECCC-cCc-eecCCCCHHHHHHHHHHHHHhCCCce-
Confidence 9999999999999999999999999999988632 2233444433211 111 13346789999999999998887653
Q ss_pred ccCCCCccc---hHHHHHH-hcccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHH
Q 011730 403 VVPPMMGAE---DFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFL 467 (478)
Q Consensus 403 ~~~~~~g~t---D~~~~~~-~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll 467 (478)
....+++ |+.+... .+|++.+ |++.. ..++|++||+++++++.+++++|++++.+|.
T Consensus 394 --~~~~gg~~~~~~~~~~~~gip~v~~--GpG~~----~~~~H~~nE~v~i~~l~~~~~~l~~~~~~~~ 454 (456)
T PRK08201 394 --FTRMGGSIPVVETFSSQLHIPIVLM--GFGLP----SENFHAPNEHFHLENFDKGLRTLVEYWHQLA 454 (456)
T ss_pred --ecCCCCcHHHHHHHHHHhCCCEEEe--cCCCC----CCCCCCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 2233444 5555533 4888754 55532 1469999999999999999999999998873
No 29
>PRK07907 hypothetical protein; Provisional
Probab=100.00 E-value=8e-42 Score=358.59 Aligned_cols=368 Identities=15% Similarity=0.170 Sum_probs=272.3
Q ss_pred HHHHHHHhcCcchHHHHHHHHHHhhcCCCCCcc------hHHHHHHHHHHHHhCCC-cEEec--cCCceEEEEEcCC-CC
Q 011730 84 SKEVMELARRPETVDWLKSVRRTIHQNPELAFQ------EFETSRLLRAELDRMEI-GYKYP--LAKTGIRAWVGTG-GP 153 (478)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~l~~~L~~iPs~s~~------E~~~a~~l~~~L~~~G~-~v~~~--~~~~~via~~g~~-~~ 153 (478)
.+++.+++ +++.+++++++++|++|||++++ |.++++||.++|+++|| +++.. .+++|++++++++ ++
T Consensus 6 ~~~~~~~i--~~~~~~~~~ll~~LV~ipS~s~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~nl~a~~~~~~~~ 83 (449)
T PRK07907 6 ADDLRARV--AELLPRVRADLEELVRIPSVAADPFRREEVARSAEWVADLLREAGFDDVRVVSADGAPAVIGTRPAPPGA 83 (449)
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHhcCCCCCCCccchhhHHHHHHHHHHHHHHcCCceEEEEecCCCCEEEEEecCCCCC
Confidence 35688888 88899999999999999999963 67899999999999998 67653 3568999998543 46
Q ss_pred cEEEEEEccccccCCC---CCCCCcccc-cCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC------CCccCC-CcH
Q 011730 154 PFVALRADMDALPIQE---AVEWEYKSK-VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLK------PAEEAG-NGA 219 (478)
Q Consensus 154 p~v~~~aHlDvVP~~~---~~~~Pf~~~-~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~------~dEE~g-~G~ 219 (478)
|+|+|+||+||||+++ |+.+||.+. ++|++||||+ | +++++++.|+++| ....+.. .+||.| .|.
T Consensus 84 ~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l-~~~~~~~i~~~~~~dEE~g~~g~ 162 (449)
T PRK07907 84 PTVLLYAHHDVQPPGDPDAWDSPPFELTERDGRLYGRGAADDKGGIAMHLAALRAL-GGDLPVGVTVFVEGEEEMGSPSL 162 (449)
T ss_pred CEEEEEcccCCCCCCCccccCCCCceeEEECCEEEECCccCCcHHHHHHHHHHHHh-ccCCCCcEEEEEEcCcccCCccH
Confidence 8999999999999864 678899975 5899999998 3 8888888888888 2222211 789876 588
Q ss_pred HHHHHcCC-CCCCcEEEEEecCCCCCcceEEeecccccceeeEEEEEEE--eecCCCCC-CCCCCCHHHHHHHHHHHHHh
Q 011730 220 KRMMADGA-LEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVIS--GKKGGAAN-PHRSVDPVLAASAAVISLQG 295 (478)
Q Consensus 220 ~~l~~~g~-~~~~D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~--G~~~Has~-p~~g~NAi~~~~~~i~~l~~ 295 (478)
+.+++... ..++|++|+.+++... .+...+..+ ++|..+++++++ |+++|+|. +..+.||+..++++|.+|.+
T Consensus 163 ~~~l~~~~~~~~~d~~iv~E~~~~~-~~~p~i~~~--~kG~~~~~l~v~~~G~~~Hss~~~~~~~nAi~~~~~~l~~l~~ 239 (449)
T PRK07907 163 ERLLAEHPDLLAADVIVIADSGNWS-VGVPALTTS--LRGNADVVVTVRTLEHAVHSGQFGGAAPDALTALVRLLATLHD 239 (449)
T ss_pred HHHHHhchHhhcCCEEEEecCCcCC-CCCeEEEEe--cCCcEEEEEEEEECCCCCCCccccccCCCHHHHHHHHHHhhCC
Confidence 88887631 1257999999975421 121112223 347888888888 89999997 46689999999999999976
Q ss_pred hhhccc-------CC---------------------------------CCCcEEEEEEEeC---CCccceecCcEEEEEE
Q 011730 296 LVSREA-------NP---------------------------------LDSQVVSVTYFNG---GDHLDMIPDAVVIGGT 332 (478)
Q Consensus 296 l~~~~~-------~~---------------------------------~~~~~~~v~~i~g---G~~~NvIP~~a~~~~d 332 (478)
...+.. .+ ....+++++.|+| |.+.|+||++|++++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~~~~~g~~~nvIP~~a~~~~d 319 (449)
T PRK07907 240 EDGNVAVDGLDATEPWLGVDYDEERFRADAGVLDGVELIGTGSVADRLWAKPAITVIGIDAPPVAGASNALPPSARARLS 319 (449)
T ss_pred CCCCEeCCCccCCCCcccccccHHHHHHHhhhhhcccccCCChHHHHhhhcCcEEEEeeecCCCCCCCCEecCceEEEEE
Confidence 421100 00 1235788888886 4688999999999999
Q ss_pred EeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccch
Q 011730 333 LRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAED 412 (478)
Q Consensus 333 iR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD 412 (478)
+|++|+++.+++.+.|++++++.. .++.++++++... .+++ .+..++++++.+++++++++|.++. ....+++++
T Consensus 320 iR~~p~~~~e~v~~~l~~~l~~~~-~~~~~~~~~~~~~-~~p~-~~~~~~~~~~~l~~a~~~~~g~~~~--~~~~~g~~~ 394 (449)
T PRK07907 320 LRVAPGQDAAEAQDALVAHLEAHA-PWGAHVTVERGDA-GQPF-AADASGPAYDAARAAMREAWGKDPV--DMGMGGSIP 394 (449)
T ss_pred EEcCCCCCHHHHHHHHHHHHHhcC-CCCcEEEEEECCC-cCce-eCCCCCHHHHHHHHHHHHHhCCCce--ecCCCCcHH
Confidence 999999999999999999988742 2345566654321 1211 3346789999999999999988653 233344444
Q ss_pred H-HHHHHhccc-ceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHH
Q 011730 413 F-SFYSEVVPA-AFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERF 466 (478)
Q Consensus 413 ~-~~~~~~iP~-~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~l 466 (478)
+ +.|.+..+. .+..+|++++. .++|++||+++++++.+++++|++++.+|
T Consensus 395 ~~~~~~~~~~~~~~v~~Gpg~~~----~~aH~~nE~i~i~~l~~~~~~~~~~l~~~ 446 (449)
T PRK07907 395 FIAELQEAFPQAEILVTGVEDPK----TRAHSPNESVHLGELERAAVAEALLLARL 446 (449)
T ss_pred HHHHHHHhcCCCcEEEeccCCCC----CCCcCCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 2 344443332 12235666431 46999999999999999999999999887
No 30
>PRK07473 carboxypeptidase; Provisional
Probab=100.00 E-value=9.8e-42 Score=349.70 Aligned_cols=344 Identities=14% Similarity=0.148 Sum_probs=262.0
Q ss_pred chHHHHHHHHHHhhcCCCCCcchH---HHHHHHHHHHHhCCCcEEeccC----CceEEEEEcC--CCCcEEEEEEccccc
Q 011730 95 ETVDWLKSVRRTIHQNPELAFQEF---ETSRLLRAELDRMEIGYKYPLA----KTGIRAWVGT--GGPPFVALRADMDAL 165 (478)
Q Consensus 95 ~~~~~l~~l~~~L~~iPs~s~~E~---~~a~~l~~~L~~~G~~v~~~~~----~~~via~~g~--~~~p~v~~~aHlDvV 165 (478)
...+++++++++|++|||++++|. ++++|+.++|+++|++++.... ..++++++++ +.+|+|+|+||||||
T Consensus 8 ~~~~~~~~~l~~Lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~gH~DtV 87 (376)
T PRK07473 8 FDSEAMLAGLRPWVECESPTWDAAAVNRMLDLAARDMAIMGATIERIPGRQGFGDCVRARFPHPRQGEPGILIAGHMDTV 87 (376)
T ss_pred cCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCeEEEEeCCCCCCCCeEEEEecCCCC
Confidence 347889999999999999999886 6678999999999999876432 2478898853 236899999999999
Q ss_pred cC-CCCCCCCcccccCCeEEeCcc---hHHHHHHHHHHHHHHhcCCCC--C------CCccCC-CcHHHHHHcCCCCCCc
Q 011730 166 PI-QEAVEWEYKSKVAGKMHACGH---DAHVAMLIGAAKILKSREHLL--K------PAEEAG-NGAKRMMADGALEDVE 232 (478)
Q Consensus 166 P~-~~~~~~Pf~~~~~G~~~g~G~---dg~~a~~l~aa~~L~~~~~~l--~------~dEE~g-~G~~~l~~~g~~~~~D 232 (478)
|+ +.+..+||. .++|++||||. +++++++|.|+++|++.+..+ + +|||.+ .|++.+++++.. ..|
T Consensus 88 ~~~~~~~~~p~~-~~~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~g~~~~~~~~~~-~~d 165 (376)
T PRK07473 88 HPVGTLEKLPWR-REGNKCYGPGILDMKGGNYLALEAIRQLARAGITTPLPITVLFTPDEEVGTPSTRDLIEAEAA-RNK 165 (376)
T ss_pred CCCCCccCCCeE-EECCEEEcCchhhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEeCCcccCCccHHHHHHHhhc-cCC
Confidence 64 555678996 56799999996 389999999999998765432 2 999976 489999887543 579
Q ss_pred EEEEEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCC-CCCCCCCHHHHHHHHHHHHHhhhhcccCCCCCcEEEE
Q 011730 233 AIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAA-NPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSV 311 (478)
Q Consensus 233 ~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has-~p~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~v 311 (478)
++|+.+|+.. ..+.+. + ..|..+++|+++|+++|++ .|+.|+|||..|++++.+|+++.. ...++++
T Consensus 166 ~~iv~ep~~~-~~~v~~---~--~~G~~~~~v~~~G~~aHag~~p~~g~nAi~~~~~~i~~l~~~~~------~~~~~~v 233 (376)
T PRK07473 166 YVLVPEPGRP-DNGVVT---G--RYAIARFNLEATGRPSHAGATLSEGRSAIREMARQILAIDAMTT------EDCTFSV 233 (376)
T ss_pred EEEEeCCCCC-CCCEEE---E--CeeeEEEEEEEEeEcCCCCCCcccCcCHHHHHHHHHHHHHHhcC------CCceEeE
Confidence 9999998632 112222 2 2378899999999999997 599999999999999999988732 1357899
Q ss_pred EEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHH
Q 011730 312 TYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKV 391 (478)
Q Consensus 312 ~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~ 391 (478)
+.|+||.+.|+||++|++.+++|....+..+++.+++.+.++ ...+++++++.... .+.+.....++++++.++++
T Consensus 234 g~i~gg~~~n~VP~~~~~~~d~r~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~ 309 (376)
T PRK07473 234 GIVHGGQWVNCVATTCTGEALSMAKRQADLDRGVARMLALSG---TEDDVTFTVTRGVT-RPVWEPDAGTMALYEKARAI 309 (376)
T ss_pred eeEEcCCCCcCCCCceEEEEEEEeCCHhHHHHHHHHHHHhhC---cCCCeEEEEEcccc-CCCCCCChhHHHHHHHHHHH
Confidence 999999999999999999999998887777777666655544 22344555542211 12221112234688888887
Q ss_pred HHHhcCCCcccccCCCCccchHHHHHH-hcccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHH
Q 011730 392 AIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERF 466 (478)
Q Consensus 392 ~~~~~G~~~~~~~~~~~g~tD~~~~~~-~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~l 466 (478)
.+. +|.++. ...+++++|+++++. .+|++. ++|++. ..+|++||+++++++.+++++|++++.++
T Consensus 310 ~~~-~g~~~~--~~~~~g~tDa~~~~~~giP~v~-g~Gpg~------~~~H~~dE~v~i~~l~~~~~vl~~~l~~~ 375 (376)
T PRK07473 310 AGQ-LGLSLP--HGSAGGGSDGNFTGAMGIPTLD-GLGVRG------ADYHTLNEHIEVDSLAERGRLMAGLLATL 375 (376)
T ss_pred HHH-cCCCCc--cccCccccHhhhHHhcCCCEEE-eccCCC------CCCCCCCceEecccHHHHHHHHHHHHHhc
Confidence 665 676542 356788999999976 489875 346543 35899999999999999999999998754
No 31
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=5.2e-42 Score=349.03 Aligned_cols=331 Identities=18% Similarity=0.217 Sum_probs=256.5
Q ss_pred chHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhC-CCcEEeccCCceEEEEEcCCCCcEEEEEEccccccCCCCCCC
Q 011730 95 ETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRM-EIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEW 173 (478)
Q Consensus 95 ~~~~~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~-G~~v~~~~~~~~via~~g~~~~p~v~~~aHlDvVP~~~~~~~ 173 (478)
++.+++++++++|++|||+|++|.++++||.++|+++ |+++... +.|++++++.+.+++|+|+|||||||+++
T Consensus 4 ~~~~~~~~~l~~li~ips~s~~e~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~i~l~~H~Dtvp~~~---- 77 (352)
T PRK13007 4 DLAADLAELTAALVDIPSVSGDEKALADAVEAALRALPHLEVIRH--GNSVVARTDLGRPSRVVLAGHLDTVPVAD---- 77 (352)
T ss_pred chHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHhCcCceEEec--CCeEEEEccCCCCCeEEEEccccccCCCC----
Confidence 3568899999999999999999999999999999996 8887653 46899998655456899999999999864
Q ss_pred Cccc-ccCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC----CCccCC---CcHHHHHHcC-CCCCCcEEEEEecCC
Q 011730 174 EYKS-KVAGKMHACGH-D--AHVAMLIGAAKILKSREHLLK----PAEEAG---NGAKRMMADG-ALEDVEAIFAVHVSH 241 (478)
Q Consensus 174 Pf~~-~~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~----~dEE~g---~G~~~l~~~g-~~~~~D~~i~~~~~~ 241 (478)
||.. .++|++||||+ | +++|++|.|++.|.+....+. ++||.+ .|++.++... .+.++|++|++||+.
T Consensus 78 ~~~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~~~~i~~~~~~~EE~~~~~~G~~~~~~~~~~~~~~d~~i~~ep~~ 157 (352)
T PRK13007 78 NLPSRREGDRLYGCGASDMKSGLAVMLHLAATLAEPAHDLTLVFYDCEEVEAEANGLGRLAREHPEWLAGDFAILLEPTD 157 (352)
T ss_pred CCCcceeCCEEEccCcccccHHHHHHHHHHHHhhccCCCeEEEEEecccccCCcccHHHHHHhcccccCCCEEEEecCCC
Confidence 3443 35799999999 4 889999999998854333332 999975 3788887653 234689999999754
Q ss_pred CCCcceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhcccC---CCCCcEEEEEEEeCCC
Q 011730 242 EHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREAN---PLDSQVVSVTYFNGGD 318 (478)
Q Consensus 242 ~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~~~~---~~~~~~~~v~~i~gG~ 318 (478)
. .+. .| ..|..+++|+++|+++|+|.|+.|.||+..++++|.+|+.+..+... .....+++++.|+||.
T Consensus 158 ~----~i~--~~--~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~i~gG~ 229 (352)
T PRK13007 158 G----VIE--AG--CQGTLRVTVTFHGRRAHSARSWLGENAIHKAAPVLARLAAYEPREVVVDGLTYREGLNAVRISGGV 229 (352)
T ss_pred C----ceE--ee--ccceEEEEEEEEecccccCCCccCcCHHHHHHHHHHHHHHhcccccccCCCCccceeEeEeEecCC
Confidence 2 222 22 23788999999999999999999999999999999999886432211 1113478999999999
Q ss_pred ccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCC
Q 011730 319 HLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGP 398 (478)
Q Consensus 319 ~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~ 398 (478)
..|+||++|++.+|+|++|.++.+++.++|++++++. + ++++... .+.+ ....++++++.+.++ +|.
T Consensus 230 ~~nviP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~----~---~~~~~~~-~~~~-~~~~~~~~~~~~~~~----~g~ 296 (352)
T PRK13007 230 AGNVIPDECVVNVNYRFAPDRSLEEALAHVREVFDGF----A---EVEVTDL-APGA-RPGLDHPAAAALVAA----VGG 296 (352)
T ss_pred cCccCCCeEEEEEEEeeCCCCCHHHHHHHHHHHhccc----c---EEEeecc-cCCC-CCCCCCHHHHHHHHH----hCC
Confidence 9999999999999999999999999999999887752 1 3433321 1222 223567888877775 354
Q ss_pred CcccccCCCCccchHHHHHHh-cccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHH
Q 011730 399 MNYRVVPPMMGAEDFSFYSEV-VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIA 463 (478)
Q Consensus 399 ~~~~~~~~~~g~tD~~~~~~~-iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~ 463 (478)
.+ ....+++|+++++.. +|++. +|++.. ..+|++||+++++++.+++++|+.++
T Consensus 297 ~~----~~~~g~td~~~~~~~Gip~v~--~Gpg~~-----~~~H~~~E~v~i~~l~~~~~~~~~~~ 351 (352)
T PRK13007 297 EV----RAKYGWTDVARFSALGIPAVN--FGPGDP-----ALAHQRDEHVPVAQITACARILRRWL 351 (352)
T ss_pred CC----ccccccchHHHHHhCCCCEEE--eCCCch-----hhccCCCCceEHHHHHHHHHHHHHHh
Confidence 32 345788999999864 89875 465532 46999999999999999999999875
No 32
>PRK09104 hypothetical protein; Validated
Probab=100.00 E-value=6e-41 Score=353.39 Aligned_cols=367 Identities=14% Similarity=0.107 Sum_probs=274.1
Q ss_pred HHHHHHHhcCcchHHHHHHHHHHhhcCCCCCcch------HHHHHHHHHHHHhCCCcEEec--cCCceEEEEEcC-C-CC
Q 011730 84 SKEVMELARRPETVDWLKSVRRTIHQNPELAFQE------FETSRLLRAELDRMEIGYKYP--LAKTGIRAWVGT-G-GP 153 (478)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~l~~~L~~iPs~s~~E------~~~a~~l~~~L~~~G~~v~~~--~~~~~via~~g~-~-~~ 153 (478)
.+++.+++ +...+++++++++|++|||+|+++ .++++||.++|+++||+++.. .+++|+++++++ + .+
T Consensus 5 ~~~~~~~~--~~~~~~~~~~L~~lv~i~Svs~~~~~~~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~l~a~~~g~~~~~ 82 (464)
T PRK09104 5 LDPVLDHI--DANLDASLERLFALLRIPSISTDPAYAADCRKAADWLVADLASLGFEASVRDTPGHPMVVAHHEGPTGDA 82 (464)
T ss_pred HHHHHHHH--HHhHHHHHHHHHHHhcCCCCCCCccchHHHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCC
Confidence 34688899 888999999999999999999764 678999999999999998653 346789999853 2 36
Q ss_pred cEEEEEEccccccCCC---CCCCCcccc-cCC-----eEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC--------CCc
Q 011730 154 PFVALRADMDALPIQE---AVEWEYKSK-VAG-----KMHACGH-D--AHVAMLIGAAKILKSREHLLK--------PAE 213 (478)
Q Consensus 154 p~v~~~aHlDvVP~~~---~~~~Pf~~~-~~G-----~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~--------~dE 213 (478)
|+|+|+||+||||+++ |+.+||.+. ++| ++||||+ | |+++++|.|++.|++.+..++ .||
T Consensus 83 ~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~~~~~~~~lyGRG~~D~Kg~laa~l~a~~~l~~~~~~~~~~i~~~~~~dE 162 (464)
T PRK09104 83 PHVLFYGHYDVQPVDPLDLWESPPFEPRIKETPDGRKVIVARGASDDKGQLMTFVEACRAWKAVTGSLPVRVTILFEGEE 162 (464)
T ss_pred CEEEEEecccCCCCCCcccCCCCCCcceEecCcCCcceEEEecccCCcHHHHHHHHHHHHHHHhcCCCCCcEEEEEECcc
Confidence 9999999999999854 678899975 333 5999998 3 889999999999988654332 999
Q ss_pred cCCC-cHHHHHHcCC-CCCCcEEEEEecCCCCC-cceEEeecccccceeeEEEEEEEe--ecCCCCC-CCCCCCHHHHHH
Q 011730 214 EAGN-GAKRMMADGA-LEDVEAIFAVHVSHEHP-TGVIGSRPGPLLAGCGFFHAVISG--KKGGAAN-PHRSVDPVLAAS 287 (478)
Q Consensus 214 E~g~-G~~~l~~~g~-~~~~D~~i~~~~~~~~~-~g~i~~~~g~~~~g~~~~~i~v~G--~~~Has~-p~~g~NAi~~~~ 287 (478)
|.|+ |.+.++.+.. ...+|++|+.+++...+ ...+. .+ ++|..+++|+++| +++|||. |+.|.||+..|+
T Consensus 163 E~g~~g~~~~l~~~~~~~~~d~~iv~E~~~~~~~~~~i~--~~--~kG~~~~~l~v~g~~~~~Hss~~~~~g~nai~~~~ 238 (464)
T PRK09104 163 ESGSPSLVPFLEANAEELKADVALVCDTGMWDRETPAIT--TS--LRGLVGEEVTITAADRDLHSGLFGGAAANPIRVLT 238 (464)
T ss_pred ccCCccHHHHHHhhHHhcCCCEEEEeCCCCCCCCCeEEE--ee--cCCeEEEEEEEEeCCCCccccccCCccCCHHHHHH
Confidence 9764 6666665421 12579999999653211 11222 22 3488999999999 7899996 789999999999
Q ss_pred HHHHHHHhhhhccc------------------------------------CC------------CCCcEEEEEEEeCCC-
Q 011730 288 AAVISLQGLVSREA------------------------------------NP------------LDSQVVSVTYFNGGD- 318 (478)
Q Consensus 288 ~~i~~l~~l~~~~~------------------------------------~~------------~~~~~~~v~~i~gG~- 318 (478)
+++.+|++...+.. .+ ....+++++.|+||.
T Consensus 239 ~~l~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~ 318 (464)
T PRK09104 239 RILAGLHDETGRVTLPGFYDGVEELPPEILAQWKALGFTAEAFLGPVGLSIPAGEKGRSVLEQIWSRPTCEINGIWGGYT 318 (464)
T ss_pred HHHHhccCCCCCEeCCccccCCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccCcccHHHHHHHhhCCeEEEeccccCCC
Confidence 99999865311000 00 113578999999985
Q ss_pred ---ccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHh
Q 011730 319 ---HLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDL 395 (478)
Q Consensus 319 ---~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 395 (478)
..|+||++|++.+|+|++|+++.+++.+.|++++++.. ..+.++++..... .....++.++++++.+.++++++
T Consensus 319 ~~~~~nvvP~~~~~~~diR~~p~~~~~~v~~~i~~~l~~~~-~~~~~v~~~~~~~--~~~~~~~~~~~~v~~l~~~~~~~ 395 (464)
T PRK09104 319 GEGFKTVIPAEASAKVSFRLVGGQDPAKIREAFRAYVRARL-PADCSVEFHDHGG--SPAIALPYDSPALAAAKAALSDE 395 (464)
T ss_pred CCCCccEecCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhC-CCCeEEEEEecCC--CCceECCCCCHHHHHHHHHHHHH
Confidence 46999999999999999999999999999999988631 1223344432211 11223456789999999999998
Q ss_pred cCCCcccccCCCCccc-hHHHHHH--hcccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHH
Q 011730 396 LGPMNYRVVPPMMGAE-DFSFYSE--VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFL 467 (478)
Q Consensus 396 ~G~~~~~~~~~~~g~t-D~~~~~~--~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll 467 (478)
+|.++. ....++++ |++.|.+ .+|++.+ |++.. ...+|++||+++++++.+++++|++++.+++
T Consensus 396 ~~~~~~--~~~~~g~~~~~~~~~~~~gip~v~~--g~G~~----~~~aH~~nE~i~i~~l~~~~~~~~~ll~~~~ 462 (464)
T PRK09104 396 WGKPAV--LIGSGGSIPIVGDFKRILGMDSLLV--GFGLD----DDRIHSPNEKYDLESFHKGIRSWARILAALA 462 (464)
T ss_pred hCCCce--ecCCCCcHHHHHHHHHHhCCCEEEe--cCCCC----CCCCcCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 887653 23333443 4677654 4888754 44432 1469999999999999999999999998875
No 33
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=100.00 E-value=1.8e-41 Score=346.22 Aligned_cols=333 Identities=17% Similarity=0.158 Sum_probs=265.4
Q ss_pred HHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEecc------CCceEEEEEcC-CCCcEEEEEEccccccCCCCC
Q 011730 99 WLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL------AKTGIRAWVGT-GGPPFVALRADMDALPIQEAV 171 (478)
Q Consensus 99 ~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~------~~~~via~~g~-~~~p~v~~~aHlDvVP~~~~~ 171 (478)
++++++++|++|||++++|.++++||.++|+++||+++... .++|+++++++ +++|+|+|+||+||||.++
T Consensus 1 ~~~~~~~~l~~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~l~~H~D~V~~~~-- 78 (361)
T TIGR01883 1 RLKKYFLELIQIDSESGKEKAILTYLKKQITKLGIPVSLDEVPAEVSNDNNLIARLPGTVKFDTIFFCGHMDTVPPGA-- 78 (361)
T ss_pred ChHHHHHHHeecCCCCCcHHHHHHHHHHHHHHcCCEEEEeccccccCCCceEEEEEeCCCCCCcEEEEeeccccCCCC--
Confidence 36789999999999999999999999999999999987643 36899999843 3458999999999999753
Q ss_pred CCCccc-ccCCeEEeCcc-----h--HHHHHHHHHHHHHHhcCC---CCC----CCccCC-CcHHHHHHcCCCCCCcEEE
Q 011730 172 EWEYKS-KVAGKMHACGH-----D--AHVAMLIGAAKILKSREH---LLK----PAEEAG-NGAKRMMADGALEDVEAIF 235 (478)
Q Consensus 172 ~~Pf~~-~~~G~~~g~G~-----d--g~~a~~l~aa~~L~~~~~---~l~----~dEE~g-~G~~~l~~~g~~~~~D~~i 235 (478)
||.. .++|++||||+ | ++++++|.+++.|++.+. .+. +|||.+ .|++.+.+.+. ..|+.+
T Consensus 79 --~~~~~~~~~~~~g~G~~~~g~D~k~g~a~~l~~~~~l~~~~~~~~~v~~~~~~~EE~g~~G~~~~~~~~~--~~~~~~ 154 (361)
T TIGR01883 79 --GPEPVVEDGIFTSLGGTILGADDKAGVAAMLEAMDVLSTEETPHGTIEFIFTVKEELGLIGMRLFDESKI--TAAYGY 154 (361)
T ss_pred --CCCceecCCeEecCCCeEeeccccHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccCchhHhHhChhhc--CcceeE
Confidence 3444 35689999996 6 788999999999987542 111 999976 48888776542 367877
Q ss_pred EEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCC-CCCCCCCHHHHHHHHHHHHHhhhhcccCCCCCcEEEEEEE
Q 011730 236 AVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAA-NPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYF 314 (478)
Q Consensus 236 ~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has-~p~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~v~~i 314 (478)
+.+++. ..+.+.. + ..|..+++++++|+++|++ .|+.|+||+..+++++..|+... .. ...+++++.+
T Consensus 155 ~~~~~~--~~~~i~~--~--~~g~~~~~i~~~G~~~Ha~~~p~~g~nAi~~~~~~i~~l~~~~---~~--~~~~~~i~~i 223 (361)
T TIGR01883 155 CLDAPG--EVGNIQL--A--APTQVKVDATIAGKDAHAGLVPEDGISAISVARMAIHAMRLGR---ID--EETTANIGSF 223 (361)
T ss_pred EEeCCC--CcceEEe--c--CCceEEEEEEEEeeecCCCCCcccCcCHHHHHHHHHHhccccC---CC--Ccccccccee
Confidence 777542 2233332 2 2478899999999999986 69999999999999999886531 11 2356889999
Q ss_pred eCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCC--ccCCHHHHHHHHHHH
Q 011730 315 NGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPP--TVNDEDMYEHVKKVA 392 (478)
Q Consensus 315 ~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~--~~~d~~l~~~~~~~~ 392 (478)
+||...|+||++|++.+++|..|.++.+.+.+++++.+++.+..+++++++++.. .+++ +..++++++.+++++
T Consensus 224 ~gG~~~nvVP~~~~~~~diR~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~lv~~l~~a~ 299 (361)
T TIGR01883 224 SGGVNTNIVQDEQLIVAEARSLSFRKAEAQVQTMRERFEQAAEKYGATLEEETRL----IYEGFKIHPQHPLMNIFKKAA 299 (361)
T ss_pred ecCCccCccCCceEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEEEe----ccccccCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998888788888876642 2233 345779999999999
Q ss_pred HHhcCCCcccccCCCCccchHHHHHH-hcccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHH
Q 011730 393 IDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIA 463 (478)
Q Consensus 393 ~~~~G~~~~~~~~~~~g~tD~~~~~~-~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~ 463 (478)
++ +|.++. ...+++++|++++.. .+|++++ |++. ..+|++||+++++++..++++|..++
T Consensus 300 ~~-~g~~~~--~~~~~g~tD~~~~~~~giP~v~~--G~g~------~~~Hs~~E~v~i~~~~~~~~~~~~~~ 360 (361)
T TIGR01883 300 KK-IGLKTS--EIFSGGGSDANVLNEKGVPTVNL--SAGY------VHAHTEKETISIEQLVKLAELVIALA 360 (361)
T ss_pred HH-cCCCcE--EEecCcccHHHHHhhCCCceEEE--CCCc------ccCcCcceeEEHHHHHHHHHHHHHHh
Confidence 87 687653 246678999999986 5999874 5543 25999999999999999999999876
No 34
>PRK08262 hypothetical protein; Provisional
Probab=100.00 E-value=2.1e-41 Score=358.92 Aligned_cols=359 Identities=13% Similarity=0.163 Sum_probs=265.9
Q ss_pred chHHHHHHHHHHhhcCCCCCcchH---------HHHHHHHHHHHhCCCcEEec-cCCceEEEEE-cCCCC-cEEEEEEcc
Q 011730 95 ETVDWLKSVRRTIHQNPELAFQEF---------ETSRLLRAELDRMEIGYKYP-LAKTGIRAWV-GTGGP-PFVALRADM 162 (478)
Q Consensus 95 ~~~~~l~~l~~~L~~iPs~s~~E~---------~~a~~l~~~L~~~G~~v~~~-~~~~~via~~-g~~~~-p~v~~~aHl 162 (478)
...+++++++++|++|||+|++|. ++++||.++|+.+|++++.. .++.|+++.+ +++++ |+|+|+|||
T Consensus 41 ~~~~~~v~~L~~lv~i~S~s~~~~~~~~~~~~~~~~~~L~~~~~~~g~~~~~~~~~~~~vv~~~~g~~~~~~~ill~gH~ 120 (486)
T PRK08262 41 VDEDAAAERLSEAIRFRTISNRDRAEDDAAAFDALHAHLEESYPAVHAALEREVVGGHSLLYTWKGSDPSLKPIVLMAHQ 120 (486)
T ss_pred CCHHHHHHHHHHhcccceeccCCCCcccHHHHHHHHHHHHHhChhhhceeEEEEECCccEEEEEECCCCCCCeEEEECcc
Confidence 447889999999999999998763 47888999988889976543 2346788877 44434 899999999
Q ss_pred ccccCCC-----CCCCCcccc-cCCeEEeCcc---hHHHHHHHHHHHHHHhcCCCCC--------CCccCC-CcHHHHHH
Q 011730 163 DALPIQE-----AVEWEYKSK-VAGKMHACGH---DAHVAMLIGAAKILKSREHLLK--------PAEEAG-NGAKRMMA 224 (478)
Q Consensus 163 DvVP~~~-----~~~~Pf~~~-~~G~~~g~G~---dg~~a~~l~aa~~L~~~~~~l~--------~dEE~g-~G~~~l~~ 224 (478)
||||+++ |+.+||.+. ++|++||||+ +|+++++|.|++.|++.+.+++ +|||.+ .|++.+++
T Consensus 121 DvVp~~~~~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~aa~L~A~~~l~~~~~~l~~~I~llf~~dEE~g~~G~~~l~~ 200 (486)
T PRK08262 121 DVVPVAPGTEGDWTHPPFSGVIADGYVWGRGALDDKGSLVAILEAAEALLAQGFQPRRTIYLAFGHDEEVGGLGARAIAE 200 (486)
T ss_pred cccCCCCCCcccCccCCCceEeeCCEEEecCccccchhHHHHHHHHHHHHHcCCCCCCeEEEEEecccccCCcCHHHHHH
Confidence 9999853 566799986 5799999996 4999999999999988764432 999976 48887775
Q ss_pred c----CCCCCCcEEE------EEec--CCCCCcceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHH
Q 011730 225 D----GALEDVEAIF------AVHV--SHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVIS 292 (478)
Q Consensus 225 ~----g~~~~~D~~i------~~~~--~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~ 292 (478)
. +. ..|+++ ..++ ....|.+.+. ...+|..+++|+++|+++|+|.|+. .||+..++++|.+
T Consensus 201 ~l~~~~~--~~~~~~~~~~~i~~~~~~~~~~p~~~i~----~~~kG~~~~~i~v~G~~~Hss~p~~-~nai~~l~~~l~~ 273 (486)
T PRK08262 201 LLKERGV--RLAFVLDEGGAITEGVLPGVKKPVALIG----VAEKGYATLELTARATGGHSSMPPR-QTAIGRLARALTR 273 (486)
T ss_pred HHHHhcC--CEEEEEeCCceecccccCCCCceEEeeE----EeeeeeEEEEEEEecCCCCCCCCCC-CCHHHHHHHHHHH
Confidence 3 22 334443 1111 1122323332 2235789999999999999999998 9999999999999
Q ss_pred HHhhhhc----------------c----------------------------cCCCCCcEEEEEEEeCCCccceecCcEE
Q 011730 293 LQGLVSR----------------E----------------------------ANPLDSQVVSVTYFNGGDHLDMIPDAVV 328 (478)
Q Consensus 293 l~~l~~~----------------~----------------------------~~~~~~~~~~v~~i~gG~~~NvIP~~a~ 328 (478)
|+....+ . ..++...+++++.|+||...|+||++|+
T Consensus 274 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~I~gG~~~NvIP~~a~ 353 (486)
T PRK08262 274 LEDNPLPMRLRGPVAEMFDTLAPEMSFAQRVVLANLWLFEPLLLRVLAKSPETAAMLRTTTAPTMLKGSPKDNVLPQRAT 353 (486)
T ss_pred HhhCCCCCccChHHHHHHHHHHHhcCHHHHHHhhcccchhhHHHHHHhcCCccceeEEeeeeeeEEecCCccccCCCccE
Confidence 9863100 0 0012346899999999999999999999
Q ss_pred EEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCcccccCCCC
Q 011730 329 IGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMM 408 (478)
Q Consensus 329 ~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~ 408 (478)
+.+|+|++|+++.+++.++|++++++. + +++++..........+..++++++.+++++++.+|.... .+..+.
T Consensus 354 ~~~diR~~p~~~~~~i~~~i~~~~~~~----~--~~v~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~~g~~~~-~~~~~~ 426 (486)
T PRK08262 354 ATVNFRILPGDSVESVLAHVRRAVADD----R--VEIEVLGGNSEPSPVSSTDSAAYKLLAATIREVFPDVVV-APYLVV 426 (486)
T ss_pred EEEEEEeCCCCCHHHHHHHHHHHhccC----c--eEEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCcc-ccceec
Confidence 999999999999999999999988762 3 444433211011234456789999999999998774222 224567
Q ss_pred ccchHHHHHHhcccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHHh
Q 011730 409 GAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 468 (478)
Q Consensus 409 g~tD~~~~~~~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll~ 468 (478)
+++|+++|....|+++.+.+... .++....+|++||++++++|.+++++|.+++.+++.
T Consensus 427 g~tDa~~~~~~~p~~~~~~~~~~-gpg~~~~~Ht~dE~i~i~~l~~~~~i~~~~l~~~~~ 485 (486)
T PRK08262 427 GATDSRHYSGISDNVYRFSPLRL-SPEDLARFHGTNERISVANYARMIRFYYRLIENAAG 485 (486)
T ss_pred ccccHHHHHHhcCCeEEECCccC-CcccccCCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 89999999877776554333321 112235799999999999999999999999988763
No 35
>PRK07079 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=350.72 Aligned_cols=373 Identities=12% Similarity=0.032 Sum_probs=272.3
Q ss_pred hhhHHHHHHHhcCcchHHHHHHHHHHhhcCCCCCcc---hHHHHHHHH----HHHHhCCCcEEecc-----CCceEEEEE
Q 011730 81 RACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQ---EFETSRLLR----AELDRMEIGYKYPL-----AKTGIRAWV 148 (478)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~l~~~L~~iPs~s~~---E~~~a~~l~----~~L~~~G~~v~~~~-----~~~~via~~ 148 (478)
+.+.+++.+++ +. +++++++++|++|||+|++ +.++++|+. ++|+++||+++... +++||++++
T Consensus 4 ~~~~~~~~~~~--~~--~~~~~~L~~LV~ipSvs~~~~~~~~~~~~l~~~~~~~l~~~G~~~~~~~~~~~~~~~~vva~~ 79 (469)
T PRK07079 4 EAAIARAAAYF--DS--GAFFADLARRVAYRTESQNPDRAPALRAYLTDEIAPALAALGFTCRIVDNPVAGGGPFLIAER 79 (469)
T ss_pred HHHHHHHHHhh--cc--HHHHHHHHHHhccCCCCCCcccHHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCEEEEEe
Confidence 34567788887 64 5799999999999999974 446677764 58999999987532 357899998
Q ss_pred cC-CCCcEEEEEEccccccCCC--CC--CCCcccc-cCCeEEeCcc-h--HHHHHHHHHHHHHHhc-CCCCC--------
Q 011730 149 GT-GGPPFVALRADMDALPIQE--AV--EWEYKSK-VAGKMHACGH-D--AHVAMLIGAAKILKSR-EHLLK-------- 210 (478)
Q Consensus 149 g~-~~~p~v~~~aHlDvVP~~~--~~--~~Pf~~~-~~G~~~g~G~-d--g~~a~~l~aa~~L~~~-~~~l~-------- 210 (478)
++ +++|+|+|+||+||||++. |+ .+||... ++|++||||+ | ++++++|.|+++|.+. +.++.
T Consensus 80 ~~~~~~~~lll~gH~DvVp~~~~~W~~~~~Pf~~~~~dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~~~~~~~~i~~~~~ 159 (469)
T PRK07079 80 IEDDALPTVLIYGHGDVVRGYDEQWREGLSPWTLTEEGDRWYGRGTADNKGQHTINLAALEQVLAARGGRLGFNVKLLIE 159 (469)
T ss_pred CCCCCCCEEEEEcccCCCCCChHHhcccCCCCcccccCCEEEEEeccCCcHHHHHHHHHHHHHHHhcCCCCCCCEEEEEE
Confidence 54 3468999999999999764 66 4899985 5799999998 3 8888888999887643 23332
Q ss_pred CCccCC-CcHHHHHHcCC-CCCCcEEEEEecCCCCCcceEEeecccccceeeEEEEEEEee--cCCCCC-CCCCCCHHHH
Q 011730 211 PAEEAG-NGAKRMMADGA-LEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGK--KGGAAN-PHRSVDPVLA 285 (478)
Q Consensus 211 ~dEE~g-~G~~~l~~~g~-~~~~D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~--~~Has~-p~~g~NAi~~ 285 (478)
.|||.+ .|++.++++.. ....|++|+.+++...+ +...+..| ++|..+++|+++|+ +.||+. ...+.||+..
T Consensus 160 ~dEE~g~~G~~~l~~~~~~~~~~d~~iv~e~~~~~~-~~~~i~~g--~kG~~~~~v~v~G~~~~~hs~~~~g~~~nai~~ 236 (469)
T PRK07079 160 MGEEIGSPGLAEVCRQHREALAADVLIASDGPRLSA-ERPTLFLG--SRGAVNFRLRVNLRDGAHHSGNWGGLLRNPGTV 236 (469)
T ss_pred CccccCCccHHHHHHHhHHhcCCCEEEEeCCCccCC-CCeEEEEe--cceEEEEEEEEeeCCCCCCCCccccccCCHHHH
Confidence 999987 48999888642 12479999988653211 11122233 35899999999997 456664 2234699999
Q ss_pred HHHHHHHHHhhhhcc------------------------c--------------------CCCCCcEEEEEEEeCCC---
Q 011730 286 ASAAVISLQGLVSRE------------------------A--------------------NPLDSQVVSVTYFNGGD--- 318 (478)
Q Consensus 286 ~~~~i~~l~~l~~~~------------------------~--------------------~~~~~~~~~v~~i~gG~--- 318 (478)
++.+|.++.+...+. . ..+...++|++.|+||.
T Consensus 237 l~~ai~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nv~~i~gG~~~~ 316 (469)
T PRK07079 237 LAHAIASLVDARGRIQVPGLRPPPLPAAVRAALADITVGGGPGDPAIDPDWGEPGLTPAERVFGWNTLEVLAFKTGNPDA 316 (469)
T ss_pred HHHHHHHhCCCCCCEecCCccCCCCCHHHHHHHHhCCCchhhhccCcccccCCCCcCHHHHHhhCCceEEEeeecCCCCC
Confidence 999999985421000 0 00123478999999994
Q ss_pred ccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCC
Q 011730 319 HLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGP 398 (478)
Q Consensus 319 ~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~ 398 (478)
..|+||++|++.+|+|++|+++.+++.+.|++++++... ..+++++... .++ ..+..++++++.+++++++++|.
T Consensus 317 ~~NvVP~~a~~~vdiR~~P~~~~e~v~~~l~~~i~~~~~---~~v~~~~~~~-~~p-~~~~~~~~~v~~l~~a~~~~~g~ 391 (469)
T PRK07079 317 PVNAIPGSARAVCQLRFVVGTDWENLAPHLRAHLDAHGF---PMVEVTVERG-SPA-TRLDPDDPWVRWALASIARTTGK 391 (469)
T ss_pred cceEecCceEEEEEEEcCCCCCHHHHHHHHHHHHHhcCC---CCeEEEEeCC-CCc-eecCCCCHHHHHHHHHHHHHhCC
Confidence 589999999999999999999999999999999887321 1355655431 111 12456789999999999998887
Q ss_pred CcccccCCCCccchHHHHHH--hcccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHHhhccc
Q 011730 399 MNYRVVPPMMGAEDFSFYSE--VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEYGQ 472 (478)
Q Consensus 399 ~~~~~~~~~~g~tD~~~~~~--~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll~~~~~ 472 (478)
++.. .....+++|.++|.. ++|++++ |++.++ ..+|++||+|+++++..++++|++++.+|++.++.
T Consensus 392 ~~~~-~~~~~g~~d~~~~~~~~giP~v~~--g~~~~~----~~~H~~dE~v~l~~l~~~~~~~~~~~~~~~~~~~~ 460 (469)
T PRK07079 392 KPAL-LPNLGGSLPNDVFADILGLPTLWV--PHSYPA----CSQHAPNEHLLASVAREGLQIMAGLFWDLGEQGPA 460 (469)
T ss_pred CCce-ecCCCcchhHHHHHHHhCCCEEEe--cCCCCC----ccCcCCCCCCCHHHHHHHHHHHHHHHHHHhccCCc
Confidence 6431 233456678888874 5898743 443321 24799999999999999999999999999886553
No 36
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=100.00 E-value=7.9e-41 Score=339.88 Aligned_cols=329 Identities=17% Similarity=0.152 Sum_probs=252.8
Q ss_pred HHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEeccCCceEEEEEcCCCCcEEEEEEccccccCCCCCCCCcc
Q 011730 97 VDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYK 176 (478)
Q Consensus 97 ~~~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~g~~~~p~v~~~aHlDvVP~~~~~~~Pf~ 176 (478)
.+++++++++|++|||++++|.++++|+.++|+++||+++... ..|++++++++ +|+|+|++|+||||.. .||.
T Consensus 5 ~~~~~~~l~~Lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~n~i~~~~~~-~~~l~~~~H~DtVp~~----~p~~ 78 (348)
T PRK04443 5 ALEARELLKGLVEIPSPSGEEAAAAEFLVEFMESHGREAWVDE-AGNARGPAGDG-PPLVLLLGHIDTVPGD----IPVR 78 (348)
T ss_pred hHHHHHHHHHHHcCCCCCCChHHHHHHHHHHHHHcCCEEEEcC-CCcEEEEcCCC-CCEEEEEeeccccCCC----CCcE
Confidence 5789999999999999999999999999999999999987643 35899998543 5899999999999953 3663
Q ss_pred cccCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCC--CC----CCccCCC-cHHHHHHcCCCCCCcEEEEEecCCCCCcc
Q 011730 177 SKVAGKMHACGH-D--AHVAMLIGAAKILKSREHL--LK----PAEEAGN-GAKRMMADGALEDVEAIFAVHVSHEHPTG 246 (478)
Q Consensus 177 ~~~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~--l~----~dEE~g~-G~~~l~~~g~~~~~D~~i~~~~~~~~~~g 246 (478)
.++|++||||. | +++++++.|++.| ....+ +. +|||.++ |...++.++. .+|++|+.||+...
T Consensus 79 -~~~g~iyGrG~~D~Kg~~aa~l~A~~~l-~~~~~~~i~~~~~~dEE~g~~~~~~~l~~~~--~~d~~iv~Ept~~~--- 151 (348)
T PRK04443 79 -VEDGVLWGRGSVDAKGPLAAFAAAAARL-EALVRARVSFVGAVEEEAPSSGGARLVADRE--RPDAVIIGEPSGWD--- 151 (348)
T ss_pred -eeCCeEEeecccccccHHHHHHHHHHHh-cccCCCCEEEEEEcccccCChhHHHHHHhcc--CCCEEEEeCCCCcc---
Confidence 35799999997 3 8888888998888 32221 11 9999874 4555555554 58999999986521
Q ss_pred eEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhh---cccCCCCCcEEEEEEEeCCCcccee
Q 011730 247 VIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVS---REANPLDSQVVSVTYFNGGDHLDMI 323 (478)
Q Consensus 247 ~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~---~~~~~~~~~~~~v~~i~gG~~~NvI 323 (478)
.+.. + ++|..+++++++|+++|||.| |.||+..|++++..|+++.. .....+...+++++.|. ...|+|
T Consensus 152 ~i~~--~--~kG~~~~~l~~~G~~~Hss~~--g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~i~~i~--~~~n~i 223 (348)
T PRK04443 152 GITL--G--YKGRLLVTYVATSESFHSAGP--EPNAAEDAIEWWLAVEAWFEANDGRERVFDQVTPKLVDFD--SSSDGL 223 (348)
T ss_pred ceee--e--cccEEEEEEEEEeCCCccCCC--CCCHHHHHHHHHHHHHHHHhcCccccccccccceeeeEEe--cCCCCC
Confidence 1221 2 247889999999999999987 79999999999999987643 11112445677888887 356999
Q ss_pred cCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCcccc
Q 011730 324 PDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRV 403 (478)
Q Consensus 324 P~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~ 403 (478)
|++|++.+|+|++|.++.+++.+.|++++.. .+ +++... .+++ .+..++++++.++++++++.+. +.
T Consensus 224 P~~~~~~~d~R~~p~~~~~~i~~~i~~~~~~------~~--~~~~~~-~~~~-~~~~~~~~~~~l~~~~~~~~~~-~~-- 290 (348)
T PRK04443 224 TVEAEMTVGLRLPPGLSPEEAREILDALLPT------GT--VTFTGA-VPAY-MVSKRTPLARAFRVAIREAGGT-PR-- 290 (348)
T ss_pred CceEEEEEEEccCCCCCHHHHHHHHHHhCCC------cE--EEEecC-CCce-ecCCCCHHHHHHHHHHHHhcCC-cc--
Confidence 9999999999999999999999999988732 33 333321 1222 2345778999999999997553 32
Q ss_pred cCCCCccchHHHHHH--hcccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHH
Q 011730 404 VPPMMGAEDFSFYSE--VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERF 466 (478)
Q Consensus 404 ~~~~~g~tD~~~~~~--~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~l 466 (478)
.....+++|+++|.+ .+|++. +|++.. ..+|++||++++++|.+++++|++++.+|
T Consensus 291 ~~~~~g~tD~~~~~~~~gip~v~--~Gpg~~-----~~~H~~dE~i~i~~l~~~~~~~~~~~~~l 348 (348)
T PRK04443 291 LKRKTGTSDMNVVAPAWGCPMVA--YGPGDS-----DLDHTPDEHLPLAEYLRAIAVLTDVLERL 348 (348)
T ss_pred eeccccCCcHHHHhhhcCCCEEE--ECCCCc-----cccCCCcccccHHHHHHHHHHHHHHHhhC
Confidence 234678999999975 488874 466542 46899999999999999999999998764
No 37
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.2e-40 Score=346.09 Aligned_cols=338 Identities=18% Similarity=0.177 Sum_probs=261.2
Q ss_pred HHHHHHHHHHhhcCCC---------CCcchHHHHHHHHHHHHhCCCcEEeccCCceEEEEEcC-CCCcEEEEEEcccccc
Q 011730 97 VDWLKSVRRTIHQNPE---------LAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGT-GGPPFVALRADMDALP 166 (478)
Q Consensus 97 ~~~l~~l~~~L~~iPs---------~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~g~-~~~p~v~~~aHlDvVP 166 (478)
.+++++++++|.+|++ .+++|.++++||.++|+++||+++.. ...|+++++++ +++|+|+|+||+||||
T Consensus 9 ~~~~~~~~~~~~~~~s~~~g~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~nl~a~~~g~~~~~~l~l~gH~DtVp 87 (412)
T PRK12892 9 GQRVLDDLMELAAIGAAKTGVHRPTYSDAHVAARRRLAAWCEAAGLAVRID-GIGNVFGRLPGPGPGPALLVGSHLDSQN 87 (412)
T ss_pred HHHHHHHHHHHHccCCCCCCeeeCCCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCeEEEEccccCCC
Confidence 4578888888888865 56778999999999999999998764 44699999954 4468999999999999
Q ss_pred CCCCCCCCcccccCCeEEeCcchHHHHHHHHHHHHHHhcCCCCC--------CCccCC------CcHHHHHHcCC-----
Q 011730 167 IQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLK--------PAEEAG------NGAKRMMADGA----- 227 (478)
Q Consensus 167 ~~~~~~~Pf~~~~~G~~~g~G~dg~~a~~l~aa~~L~~~~~~l~--------~dEE~g------~G~~~l~~~g~----- 227 (478)
++ |+.||++ +++++|.|++.|++.+..++ +|||.+ .|++.++....
T Consensus 88 ~~------------g~~dg~~---Gvaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~ 152 (412)
T PRK12892 88 LG------------GRYDGAL---GVVAGLEAARALNEHGIATRHPLDVVAWCDEEGSRFTPGFLGSRAYAGRLDPADAL 152 (412)
T ss_pred CC------------CcccchH---HHHHHHHHHHHHHHcCCCCCCCeEEEEecCcccccccCccccHHHHHcCCCHHHHH
Confidence 74 4445543 57788888999998765433 999974 38888874210
Q ss_pred -----C-------------CCCcEEEEEecCCCC--------------Ccce-EEeecccccceeeEEEEEEEeecCCCC
Q 011730 228 -----L-------------EDVEAIFAVHVSHEH--------------PTGV-IGSRPGPLLAGCGFFHAVISGKKGGAA 274 (478)
Q Consensus 228 -----~-------------~~~D~~i~~~~~~~~--------------~~g~-i~~~~g~~~~g~~~~~i~v~G~~~Has 274 (478)
. ...|++++.+|+... +.+. ..+.. .++|..+++|+++|+++|++
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~d~~~~~ep~~~~~~~e~~~~~g~~~e~~~~~~~i~~--~~kG~~~~~i~v~G~~aHa~ 230 (412)
T PRK12892 153 AARCRSDGVPLRDALAAAGLAGRPRPAADRARPKGYLEAHIEQGPVLEQAGLPVGVVT--GIVGIWQYRITVTGEAGHAG 230 (412)
T ss_pred hCccCCCCcCHHHHHHHcCCChhhcccccccCccEEEEEEeccCHhHhhCCCcEEEEE--EeccceEEEEEEEEECCCCC
Confidence 0 023555555543110 0010 11222 23478999999999999998
Q ss_pred C-CC-CCCCHHHHHHHHHHHHHhhhhcccCCCCCcEEEEEEEeCC-CccceecCcEEEEEEEeccChHhHHHHHHHHHHH
Q 011730 275 N-PH-RSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGG-DHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEV 351 (478)
Q Consensus 275 ~-p~-~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~v~~i~gG-~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~ 351 (478)
. |+ .|.|||..+++++.+|+++..+.. .+.++++|.|+|| .+.|+||++|++++|+|++|.++.+++.++|+++
T Consensus 231 ~~p~~~g~nAi~~a~~~i~~l~~~~~~~~---~~~~~~vg~i~gg~~~~NvIP~~a~~~~diR~~p~~~~~~v~~~i~~~ 307 (412)
T PRK12892 231 TTPMALRRDAGLAAAEMIAAIDEHFPRVC---GPAVVTVGRVALDPGSPSIIPGRVEFSFDARHPSPPVLQRLVALLEAL 307 (412)
T ss_pred CCCcccccCHHHHHHHHHHHHHHHHHhcC---CCcEEEEEEEEecCCCCeEECCeEEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 5 75 688999999999999998643322 2368999999986 7999999999999999999999999999999999
Q ss_pred HHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHhcccceEEecccC
Q 011730 352 IVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKN 431 (478)
Q Consensus 352 ~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~iP~~~~~~G~~~ 431 (478)
++..+..+++++++.... .++++..|+++++.+++++++ +|.++. ...+++++|+++|++.+|+++++ |++.
T Consensus 308 ~~~~~~~~~~~~e~~~~~----~~~~~~~d~~lv~~~~~a~~~-~g~~~~--~~~~~g~tDa~~~~~~ip~~~~~-gp~~ 379 (412)
T PRK12892 308 CREIARRRGCRVSVDRIA----EYAPAPCDAALVDALRAAAEA-AGGPYL--EMPSGAGHDAQNMARIAPSAMLF-VPSK 379 (412)
T ss_pred HHHHHHHhCCeEEEEEEe----cCCCcCCCHHHHHHHHHHHHH-cCCCcc--ccCcchHHHHHHHHhHCCEEEEE-eccC
Confidence 999887778888876552 456667889999999999998 787653 35678899999998778876544 4433
Q ss_pred CCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHHh
Q 011730 432 ETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 468 (478)
Q Consensus 432 ~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll~ 468 (478)
. ..+|++||++++++|.+++++|+.++.++++
T Consensus 380 ~-----~~~H~~~E~v~i~~l~~~~~il~~~l~~~~~ 411 (412)
T PRK12892 380 G-----GISHNPAEDTSPADLAQGARVLADTLRRLAR 411 (412)
T ss_pred C-----CCCCCCCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 2 3589999999999999999999999988764
No 38
>PRK08737 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1.2e-40 Score=339.95 Aligned_cols=336 Identities=15% Similarity=0.073 Sum_probs=250.5
Q ss_pred chHHHHHHHHHHhhcCCCCC----cchHHHHHHHHHHHHhCCCcEEecc---CCceEEEEEcCCCCcEEEEEEccccccC
Q 011730 95 ETVDWLKSVRRTIHQNPELA----FQEFETSRLLRAELDRMEIGYKYPL---AKTGIRAWVGTGGPPFVALRADMDALPI 167 (478)
Q Consensus 95 ~~~~~l~~l~~~L~~iPs~s----~~E~~~a~~l~~~L~~~G~~v~~~~---~~~~via~~g~~~~p~v~~~aHlDvVP~ 167 (478)
+..+++++++++|++|||.+ .+|.++++||.++|+ |++++... ++.|+++..+ +|+|+|+||+||||+
T Consensus 3 ~~~~~~~~~l~~Lv~i~s~~~~~~~~e~~~~~~l~~~l~--g~~~~~~~~~~~~~nli~~~g---~~~lll~gH~DtVp~ 77 (364)
T PRK08737 3 DLLESTLDHLQALVSFDTRNPPRAITTGGIFDYLRAQLP--GFQVEVIDHGAGAVSLYAVRG---TPKYLFNVHLDTVPD 77 (364)
T ss_pred ccHHHHHHHHHHHhCCCCcCCCCCCCcHHHHHHHHHHhC--CCEEEEecCCCCceEEEEEcC---CCeEEEEeeeCCCCC
Confidence 45678999999999999985 357899999999996 99876543 3468888643 378999999999998
Q ss_pred C-CCCCCCcccc-cCCeEEeCcch---HHHHHHHHHHHHHHhcCCCCC----CCccCCC--cHHHHHHcCCCCCCcEEEE
Q 011730 168 Q-EAVEWEYKSK-VAGKMHACGHD---AHVAMLIGAAKILKSREHLLK----PAEEAGN--GAKRMMADGALEDVEAIFA 236 (478)
Q Consensus 168 ~-~~~~~Pf~~~-~~G~~~g~G~d---g~~a~~l~aa~~L~~~~~~l~----~dEE~g~--G~~~l~~~g~~~~~D~~i~ 236 (478)
+ .|+.+||... .+|++||||+. +.+++++.|+..+ ...+. +|||.++ |++.+++.+. +.|++|+
T Consensus 78 ~~~w~~~Pf~~~~~~g~lyGrGa~DmKg~~aa~l~a~~~~---~~~v~~~~~~dEE~g~~~g~~~~~~~~~--~~~~~iv 152 (364)
T PRK08737 78 SPHWSADPHVMRRTDDRVIGLGVCDIKGAAAALLAAANAG---DGDAAFLFSSDEEANDPRCVAAFLARGI--PYEAVLV 152 (364)
T ss_pred CCCCCCCCCceEEECCEEEEECcccchHHHHHHHHHHHcc---CCCEEEEEEcccccCchhhHHHHHHhCC--CCCEEEE
Confidence 5 3677899874 57999999983 7788887776542 22222 9999764 8888888864 5799999
Q ss_pred EecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCCC-CCCCCHHHHHHHHHHHHHhhhhcc----cCCCCCcEEEE
Q 011730 237 VHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANP-HRSVDPVLAASAAVISLQGLVSRE----ANPLDSQVVSV 311 (478)
Q Consensus 237 ~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p-~~g~NAi~~~~~~i~~l~~l~~~~----~~~~~~~~~~v 311 (478)
.+|+.. .+ ..+ ++|..+++|+++|+++|+|.| +.|+|||..++++|.++.+..... .......++++
T Consensus 153 ~Ept~~----~~--~~~--~kG~~~~~v~v~Gk~aHas~p~~~G~NAI~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~v 224 (364)
T PRK08737 153 AEPTMS----EA--VLA--HRGISSVLMRFAGRAGHASGKQDPSASALHQAMRWGGQALDHVESLAHARFGGLTGLRFNI 224 (364)
T ss_pred cCCCCc----ee--EEe--cceeEEEEEEEEeeccccCCCcccCCCHHHHHHHHHHHHHHHHHhhhhhccCCCCCCceEE
Confidence 998752 22 122 347899999999999999997 689999999999998865542111 11223458999
Q ss_pred EEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccC-CHHHHHHHHH
Q 011730 312 TYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVN-DEDMYEHVKK 390 (478)
Q Consensus 312 ~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~-d~~l~~~~~~ 390 (478)
+.|+||.+.|+||++|++.+|+|+.|.++.+++.++|+++++.. ..++++.+.. +.+++... .+++++.+.+
T Consensus 225 g~i~GG~~~NvVP~~a~~~~d~R~~p~~~~e~v~~~i~~~~~~~----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 297 (364)
T PRK08737 225 GRVEGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFAEPA----AATFEETFRG---PSLPSGDIARAEERRLAAR 297 (364)
T ss_pred eeEecCCCCCcCCCceEEEEEeeeCCCCCHHHHHHHHHHHHHHc----CCceEEEecc---CCCCCcccCcchHHHHHHH
Confidence 99999999999999999999999999999999999998877652 2334443332 23333322 2345554433
Q ss_pred HHHHhcCCCcccccCCCCccchHHHHHH-hcccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHH
Q 011730 391 VAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAER 465 (478)
Q Consensus 391 ~~~~~~G~~~~~~~~~~~g~tD~~~~~~-~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ 465 (478)
.+.+..|.+. .....++||++++.. ++|++.+ |+|.. .++|++||+|++++|.+++++|.+++.+
T Consensus 298 ~~~~~~~~~~---~~~~~~~tDa~~~~~~Gip~v~~--GpG~~-----~~aHt~dE~i~i~~l~~~~~~~~~~~~~ 363 (364)
T PRK08737 298 DVADALDLPI---GNAVDFWTEASLFSAAGYTALVY--GPGDI-----AQAHTADEFVTLDQLQRYAESVHRIIND 363 (364)
T ss_pred HHHhhhcCCC---CceeccccCHHHHHHcCCCEEEE--CCCCh-----hhccCCCcceeHHHHHHHHHHHHHHhcC
Confidence 3333356543 123466899999976 4898764 66532 4699999999999999999999998753
No 39
>PRK13381 peptidase T; Provisional
Probab=100.00 E-value=2.6e-40 Score=342.77 Aligned_cols=343 Identities=17% Similarity=0.165 Sum_probs=260.8
Q ss_pred HHHHHHHHhhcCCCCCc----------chHHHHHHHHHHHHhCCCcEEeccCCceEEEEEc-CCCC-cEEEEEEcccccc
Q 011730 99 WLKSVRRTIHQNPELAF----------QEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVG-TGGP-PFVALRADMDALP 166 (478)
Q Consensus 99 ~l~~l~~~L~~iPs~s~----------~E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~g-~~~~-p~v~~~aHlDvVP 166 (478)
++++.+++|++|||.|. .+.++++||.++|+++|++....++.+||+++++ ++++ |+|+|+||+||||
T Consensus 2 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~nvi~~~~g~~~~~~~lll~~H~D~Vp 81 (404)
T PRK13381 2 QLTDRFFRYLKVNSQSDAASGTLPSTPGQHELAKLLADELRELGLEDIVIDEHAIVTAKLPGNTPGAPRIGFIAHLDTVD 81 (404)
T ss_pred cHHHHhHhhEEEeccCCCCCCCCcCChhHHHHHHHHHHHHHHcCCCcEEEcCCeEEEEEEecCCCCCCeEEEEEEecCCC
Confidence 36788899999999997 4788999999999999996444456779999984 4444 9999999999999
Q ss_pred CCCC-CCCC----ccc------------------------ccCCeEEeCcc-----h--HHHHHHHHHHHHHHhcCC---
Q 011730 167 IQEA-VEWE----YKS------------------------KVAGKMHACGH-----D--AHVAMLIGAAKILKSREH--- 207 (478)
Q Consensus 167 ~~~~-~~~P----f~~------------------------~~~G~~~g~G~-----d--g~~a~~l~aa~~L~~~~~--- 207 (478)
++.. ...| |+. ..+|++||||+ | ++++++|.|++.|++.+.
T Consensus 82 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GrG~~~~g~DmKgg~aa~l~a~~~l~~~~~~~g 161 (404)
T PRK13381 82 VGLSPDIHPQILRFDGGDLCLNAEQGIWLRTAEHPELLNYQGEDIIFSDGTSVLGADNKAAIAVVMTLLENLTENEVEHG 161 (404)
T ss_pred ccCCCCcCcEEEecCCCceecCCccceeechHhChhHHhccCCcEEeCCCccccccccHHHHHHHHHHHHHHHhcCCCCC
Confidence 8653 1111 221 13567999996 3 888999999999987532
Q ss_pred CCC----CCccCC-CcHHHHHHcCCCCCCcEEEEEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCC-CCCCCC
Q 011730 208 LLK----PAEEAG-NGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAAN-PHRSVD 281 (478)
Q Consensus 208 ~l~----~dEE~g-~G~~~l~~~g~~~~~D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~-p~~g~N 281 (478)
.+. ++||.+ .|++.++.+++ ..|++++.|.. .+ +.+.. + .+|..+++|+++|+++|++. |+.|.|
T Consensus 162 ~i~~~~~~dEE~g~~G~~~~~~~~~--~~d~~~~~~~~--~~-~~i~~--~--~~G~~~~~v~v~Gk~aHa~~~p~~g~N 232 (404)
T PRK13381 162 DIVVAFVPDEEIGLRGAKALDLARF--PVDFAYTIDCC--EL-GEVVY--E--NFNAASAEITITGVTAHPMSAKGVLVN 232 (404)
T ss_pred CEEEEEEcccccccccHHHHHHhcC--CCCEEEEecCC--Cc-ceEEE--e--cCcceEEEEEEEeEecCCCCCcccCcC
Confidence 111 899987 59998877654 37888877643 22 33322 2 24778999999999999885 899999
Q ss_pred HHHHHHHHHHHHHhhhhcccCCCCCcEEEEEEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcC-
Q 011730 282 PVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFR- 360 (478)
Q Consensus 282 Ai~~~~~~i~~l~~l~~~~~~~~~~~~~~v~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g- 360 (478)
||..|++++.+|+++..+........+++++.++|+ |++|++.+|+|+.|.++.+++.+.|++++++.+..++
T Consensus 233 AI~~a~~~i~~l~~~~~~~~~~~~~~~i~v~~i~g~------p~~~~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~ 306 (404)
T PRK13381 233 PILMANDFISHFPRQETPEHTEGREGYIWVNDLQGN------VNKAKLKLIIRDFDLDGFEARKQFIEEVVAKINAKYPT 306 (404)
T ss_pred HHHHHHHHHHhCCccCCCCCCCCcccEEEEEeEEeC------cceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999876433222222345778777764 8999999999999999999999999999999887776
Q ss_pred CeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHH-hcccceEEecccCCCCCCCCC
Q 011730 361 CSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHT 439 (478)
Q Consensus 361 ~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~-~iP~~~~~~G~~~~~~~~~~~ 439 (478)
+++++++..........+..++++++.+++++++ .|.++. ...+++++|+++|.. .+|+++++.| . ..
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~lv~~l~~a~~~-~g~~~~--~~~~~g~tDa~~~~~~giP~v~~GpG--~------~~ 375 (404)
T PRK13381 307 ARVSLTLTDQYSNISNSIKDDRRAVDLAFDAMKE-LGIEPK--VIPMRGGTDGAALSAKGLPTPNLFTG--A------HN 375 (404)
T ss_pred cEEEEEEEeCCchhhcccccCHHHHHHHHHHHHH-cCCCee--eccCCccchHHHHhcCCCCeEEECcc--c------cC
Confidence 6777765421111112355689999999999987 576543 346678999999975 4999886444 3 24
Q ss_pred CCCCCcccCcCchHHHHHHHHHHHHHHH
Q 011730 440 GHSPYFMIDEDVLPVGAAVHATIAERFL 467 (478)
Q Consensus 440 ~H~~dE~i~~~~l~~~~~i~a~~~~~ll 467 (478)
+|++||+|++++|.+++++|++++.++.
T Consensus 376 aH~~dE~v~i~~l~~~~~v~~~~~~~~~ 403 (404)
T PRK13381 376 FHSRFEFLPVSSFVKSYEVTITICLLAA 403 (404)
T ss_pred CcCcceeEEHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999998764
No 40
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=100.00 E-value=1.3e-40 Score=341.20 Aligned_cols=323 Identities=17% Similarity=0.134 Sum_probs=240.3
Q ss_pred HHHHhhcCCCCCcchHHHHHHHHHHHHhCCCc---EEeccCCceEEEEEcCCCCcEEEEEEccccccCCC-----CCCCC
Q 011730 103 VRRTIHQNPELAFQEFETSRLLRAELDRMEIG---YKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQE-----AVEWE 174 (478)
Q Consensus 103 l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~---v~~~~~~~~via~~g~~~~p~v~~~aHlDvVP~~~-----~~~~P 174 (478)
++++|++|||++++|.++++||.++|+++|++ +... +.|++++++++++|+|+|+|||||||+++ |+.+|
T Consensus 1 ll~~Lv~ipS~s~~e~~~~~~i~~~l~~~g~~~~~~~~~--~~nvva~~~~~~~~~l~l~gH~DtVp~~~~~~~~W~~~p 78 (373)
T TIGR01900 1 LLQQIMDIFSPSDHEGPIADEIEAALNNLELEGLEVFRF--GDNVLARTDFGKASRVILAGHIDTVPIADNFPPKWLEPG 78 (373)
T ss_pred ChHHHhCCCCCCchHHHHHHHHHHHHhhccccCceEEEE--CCEEEEecCCCCCCeEEEeCccccccCCCCChhhhccCc
Confidence 46789999999999999999999999998653 4332 45899998544468999999999999864 44444
Q ss_pred c--------cc-ccCCeEEeCcc-h--HHHHHHHHHHHHHHhc--CCCCC--------CCccCC---CcHHHHHHcCC-C
Q 011730 175 Y--------KS-KVAGKMHACGH-D--AHVAMLIGAAKILKSR--EHLLK--------PAEEAG---NGAKRMMADGA-L 228 (478)
Q Consensus 175 f--------~~-~~~G~~~g~G~-d--g~~a~~l~aa~~L~~~--~~~l~--------~dEE~g---~G~~~l~~~g~-~ 228 (478)
| .. .++|++||||+ | ++++++|.|++.|++. +..++ +|||.+ .|++.+++... +
T Consensus 79 ~~~~~~~~~~~~~~~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~~~~~~i~~~~~~dEE~~~~~~G~~~~~~~~~~~ 158 (373)
T TIGR01900 79 DSLIREEIAHAHPEDGILWGCGATDMKAGDAVMLHLAATLDGRAPETELKHDLTLIAYDCEEVAAEKNGLGHIRDAHPDW 158 (373)
T ss_pred ccccccccccccccCCEEEecCchhhhHHHHHHHHHHHHHhhhccccCCCCCEEEEEEecccccCCCCCHHHHHHhCccc
Confidence 3 33 45799999999 5 8889999999988542 22222 999975 38888887642 2
Q ss_pred CCCcEEEEEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhccc--CC-CC
Q 011730 229 EDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREA--NP-LD 305 (478)
Q Consensus 229 ~~~D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~~~--~~-~~ 305 (478)
.++|++|+.||+.. .+ ..| ++|..+++|+++|+++|+|.|+.|.|||..|+++|..|+++..... .. ..
T Consensus 159 ~~~d~~iv~Ept~~----~i--~~g--~~G~~~~~i~v~G~~~H~s~p~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~ 230 (373)
T TIGR01900 159 LAADFAIIGEPTGG----GI--EAG--CNGNIRFDVTAHGVAAHSARAWLGDNAIHKAADIINKLAAYEAAEVNIDGLDY 230 (373)
T ss_pred ccCCEEEEECCCCC----cc--ccc--ceeeEEEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHHhhcccccccCCcc
Confidence 35799999998652 12 223 3488999999999999999999999999999999999988643221 11 22
Q ss_pred CcEEEEEEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHH--------HHhh---cC-CeeEEEEecCCCC
Q 011730 306 SQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVE--------QARV---FR-CSATVDFFDKGNT 373 (478)
Q Consensus 306 ~~~~~v~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~--------~~~~---~g-~~~ev~~~~~~~~ 373 (478)
..+++++.|+||.+.|+||++|++.+++|+.|.++.+++.+.|+++++. .... .+ .+++++.... .+
T Consensus 231 ~~t~~v~~I~GG~~~nvVP~~a~~~~diR~~p~~~~e~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 309 (373)
T TIGR01900 231 REGLNATFCEGGKANNVIPDEARMHLNFRFAPDKDLAEAKALMMGADAGAELGNGEHVAEGGEFDGQDGIEIAMEDE-AG 309 (373)
T ss_pred cceEEEEEEeCCCCCcccCCeEEEEEEEecCCCcCHHHHHHHHHhhhhhhhhhHHHHHHhhccccccccceEEEccc-CC
Confidence 3679999999999999999999999999999999999999999765432 2111 11 1344433211 01
Q ss_pred CCCCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHH-hcccceEEecccCCCCCCCCCCCCCCcccC
Q 011730 374 VYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMID 448 (478)
Q Consensus 374 ~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~-~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~ 448 (478)
.. ....++++++.+.+++++++|.++. ...++||+++|.. .+|++. +|+++. .++|++|||++
T Consensus 310 ~~-~~~~~~~~~~~~~~a~~~~~~~~~~----~~~g~tD~~~~~~~gip~v~--~Gpg~~-----~~aH~~dE~v~ 373 (373)
T TIGR01900 310 GA-LPGLGAPLAQDLIDAVGEEKGRDPL----AKFGWTDVARFSALGIPALN--FGAGDP-----LFAHKHDEQCP 373 (373)
T ss_pred CC-CCCCCCHHHHHHHHHHHhccCCCcc----cccCCccHHHHHhcCCCEEE--eCCCCh-----hhccCCCCCCC
Confidence 11 1234678999999999988777642 3678899999875 488876 466642 46999999985
No 41
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=100.00 E-value=1.6e-40 Score=349.49 Aligned_cols=354 Identities=13% Similarity=0.015 Sum_probs=258.9
Q ss_pred HHHHhcCcchHHHHHHHHHHhhcCCCCCcc------------hHHHHHHHHHHHHhCCCcEEeccCCceEEEEE-cCCCC
Q 011730 87 VMELARRPETVDWLKSVRRTIHQNPELAFQ------------EFETSRLLRAELDRMEIGYKYPLAKTGIRAWV-GTGGP 153 (478)
Q Consensus 87 ~~~~~~~~~~~~~l~~l~~~L~~iPs~s~~------------E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~-g~~~~ 153 (478)
+.+++ +++++++++++++|++|||++.+ +.++++++.++|+++||+++... |.++.+ .++++
T Consensus 4 ~~~~i--~~~~~~~~~~l~~lv~ipS~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~~~---~~~~~~~~~~~~ 78 (466)
T TIGR01886 4 FKEEV--EARKDALLEDLEELLRIDSSEDLENATEEYPFGPGPVDALTKFLSFAERDGFTTKNFD---NYAGHVEYGAGD 78 (466)
T ss_pred HHHHH--HHhHHHHHHHHHHHhCCCCcCCCCCCCccCCCChhHHHHHHHHHHHHHHCCCeEEEec---CCceeEEecCCC
Confidence 45667 77889999999999999999753 46688999999999999987543 333332 22236
Q ss_pred cEEEEEEccccccCC-CCCCCCcccc-cCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC--------CCccCC-CcH
Q 011730 154 PFVALRADMDALPIQ-EAVEWEYKSK-VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLK--------PAEEAG-NGA 219 (478)
Q Consensus 154 p~v~~~aHlDvVP~~-~~~~~Pf~~~-~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~--------~dEE~g-~G~ 219 (478)
|+|+|++||||||++ .|+.+||.+. ++|++||||+ | |.+++++.|+++|++.+..++ .+||.+ .|.
T Consensus 79 ~~l~~~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~~a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~ 158 (466)
T TIGR01886 79 ERLGIIGHMDVVPAGEGWTRDPFEPEIDEGRIYARGASDDKGPSLAAYYAMKILKELGLPPSKKIRFVVGTNEETGWVDM 158 (466)
T ss_pred CEEEEEeecccCCCCCCCcCCCCCeEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCCCEEEEEECccccCcccH
Confidence 899999999999986 4788999985 5799999998 3 888888889999988775543 999987 589
Q ss_pred HHHHHcCCCCCCcEEEE---------EecCCCC---------------------------CcceEEeecc----------
Q 011730 220 KRMMADGALEDVEAIFA---------VHVSHEH---------------------------PTGVIGSRPG---------- 253 (478)
Q Consensus 220 ~~l~~~g~~~~~D~~i~---------~~~~~~~---------------------------~~g~i~~~~g---------- 253 (478)
+++++.+. .+|+++. .+++... |...-....+
T Consensus 159 ~~~~~~~~--~~d~~~~~d~~~~~~~ge~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~i~~~~~~~~~~~~ 236 (466)
T TIGR01886 159 DYYFKHEE--TPDFGFSPDAEFPIINGEKGNFTLELSFKGDNKGDYVLDSFKAGLAENMVPQVARAVISGPDAEALKAAY 236 (466)
T ss_pred HHHHhcCc--CCCEEEECCCCceeEEEecceEEEEEEEecCCCCceeEEEEEcCCcCCccCCeeEEEEecCCHHHHHHHH
Confidence 99988764 3566543 3322110 0000000000
Q ss_pred ---ccccee---------eEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHH----------Hhhhh-------------
Q 011730 254 ---PLLAGC---------GFFHAVISGKKGGAANPHRSVDPVLAASAAVISL----------QGLVS------------- 298 (478)
Q Consensus 254 ---~~~~g~---------~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l----------~~l~~------------- 298 (478)
..++|. .|++|+++|+++|+|.|+.|+|||..|+++|..+ +.+..
T Consensus 237 ~~~~~~kg~~~~~~~~~~~~~~i~v~G~~aH~s~P~~G~NAi~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 316 (466)
T TIGR01886 237 ESFLADKASLDGSFEINDESATIVLIGKGAHGAAPQVGINSATFLALFLNQYAFAGGAKNFIHFLAEVEHEDFYGEKLGI 316 (466)
T ss_pred HHHHhhccCceEEEEEeCCEEEEEEEeeEcccCCCCCCcCHHHHHHHHHHhccCChhHHHHHHHHHHhcCCCCCcccCCC
Confidence 001122 2789999999999999999999999999988872 22210
Q ss_pred -cccCCCCCcEEEEEEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCC
Q 011730 299 -REANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPP 377 (478)
Q Consensus 299 -~~~~~~~~~~~~v~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~ 377 (478)
.....++..++|+|+|+||.. | ++|++.+|+|++|+++.+++.++|++.++. ...++ +......++ .
T Consensus 317 ~~~~~~~g~~S~nvgvI~gG~~-~---~~~~l~iD~R~~Pge~~eev~~eI~~~i~~-----~~~v~--~~~~~~~P~-~ 384 (466)
T TIGR01886 317 AFHDELMGDLAMNAGMFDFDHA-N---KESKLLLNFRYPQGTSPETMQKQVLDKFGG-----IVDVT--YNGHFEEPH-Y 384 (466)
T ss_pred cccccCcCceEEEeEEEEEecC-C---ceEEEEEEEecCCCCCHHHHHHHHHHHHhc-----ccEEE--EecccCCCc-c
Confidence 011124567899999999965 4 899999999999999999999999988874 13333 321001111 2
Q ss_pred ccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHhcccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHH
Q 011730 378 TVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAA 457 (478)
Q Consensus 378 ~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~ 457 (478)
...++++++.+.+++++++|.++. ...+.++||+++|...+|... +|++. ..++|++||+|++++|.++++
T Consensus 385 ~~~ds~lv~~l~~a~~~v~G~~~~--~~~~~ggTDa~~~~~~i~~gv--~gPG~-----~~~aH~~dE~V~i~el~~a~~ 455 (466)
T TIGR01886 385 VPGSDPLVQTLLKVYEKHTGKKGH--EVIIGGGTYGRLLERGVAYGA--MFEGG-----PDVMHQANEFMMLDDLILAAA 455 (466)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCc--eeeecCccHHHhccccccccc--ccCCC-----CCCccCCCcceEHHHHHHHHH
Confidence 345679999999999998887542 346788999999986666544 34543 356999999999999999999
Q ss_pred HHHHHHHHHHh
Q 011730 458 VHATIAERFLN 468 (478)
Q Consensus 458 i~a~~~~~ll~ 468 (478)
+|++++.+|++
T Consensus 456 iy~~~i~~l~~ 466 (466)
T TIGR01886 456 IYAEAIYELAK 466 (466)
T ss_pred HHHHHHHHHhC
Confidence 99999999863
No 42
>PRK07906 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-40 Score=345.12 Aligned_cols=348 Identities=14% Similarity=0.135 Sum_probs=254.0
Q ss_pred HHHHHHhhcCCCCC------cchHHHHHHHHHHHHhCCCcEEecc---CCceEEEEEc-CCC-CcEEEEEEccccccCC-
Q 011730 101 KSVRRTIHQNPELA------FQEFETSRLLRAELDRMEIGYKYPL---AKTGIRAWVG-TGG-PPFVALRADMDALPIQ- 168 (478)
Q Consensus 101 ~~l~~~L~~iPs~s------~~E~~~a~~l~~~L~~~G~~v~~~~---~~~~via~~g-~~~-~p~v~~~aHlDvVP~~- 168 (478)
++++++|++|||++ .+|.++++||.++|+++||+++... ++.|++++++ ..+ .|+|+|++|+||||++
T Consensus 2 ~~ll~~Lv~i~S~s~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nv~~~~~g~~~~~~~lll~~H~DtVp~~~ 81 (426)
T PRK07906 2 VDLCSELIRIDTTNTGDGTGKGEREAAEYVAEKLAEVGLEPTYLESAPGRANVVARLPGADPSRPALLVHGHLDVVPAEA 81 (426)
T ss_pred hHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhCCCCeEEeecCCCceEEEEEEeCCCCCCCcEEEEcccccCCCCc
Confidence 67899999999998 6799999999999999999987542 4579999984 333 4899999999999985
Q ss_pred -CCCCCCcccc-cCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC--------CCccCC--CcHHHHHHcC--CCCCC
Q 011730 169 -EAVEWEYKSK-VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLK--------PAEEAG--NGAKRMMADG--ALEDV 231 (478)
Q Consensus 169 -~~~~~Pf~~~-~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~--------~dEE~g--~G~~~l~~~g--~~~~~ 231 (478)
.|+.+||... ++|++||||+ | ++++++|.|+++|++.+..++ +|||.+ .|++.+++.. .+...
T Consensus 82 ~~W~~~Pf~~~~~dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~~g~~~l~~~~~~~~~~~ 161 (426)
T PRK07906 82 ADWSVHPFSGEIRDGYVWGRGAVDMKDMDAMMLAVVRHLARTGRRPPRDLVFAFVADEEAGGTYGAHWLVDNHPELFEGV 161 (426)
T ss_pred ccCccCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEecCcccchhhhHHHHHHHHHHhccch
Confidence 4677899975 5799999998 3 889999999999988764432 999986 3888887753 22223
Q ss_pred cEEEEEecCCC---CCc--ceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhcc------
Q 011730 232 EAIFAVHVSHE---HPT--GVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSRE------ 300 (478)
Q Consensus 232 D~~i~~~~~~~---~~~--g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~~------ 300 (478)
++ ++.+++.. .+. ....+..+ .+|..+++|+++|+++|+|.|+. .|||..++++|.+|+++..+.
T Consensus 162 ~~-ii~e~~~~~~~~~~~~~~~~i~~~--~kG~~~~~v~v~G~~~Hss~p~~-~nAi~~~~~~l~~l~~~~~~~~~~~~~ 237 (426)
T PRK07906 162 TE-AISEVGGFSLTVPGRDRLYLIETA--EKGLAWMRLTARGRAGHGSMVND-DNAVTRLAEAVARIGRHRWPLVLTPTV 237 (426)
T ss_pred he-EEECCCceeeccCCCccEEEEEec--cceEEEEEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHhCCCCcccCHHH
Confidence 33 34554421 111 11122333 35889999999999999999875 999999999999987542100
Q ss_pred --------------cCCC-------------------CCcEEEEEEEeCCCccceecCcEEEEEEEeccChHhHHHHHHH
Q 011730 301 --------------ANPL-------------------DSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQR 347 (478)
Q Consensus 301 --------------~~~~-------------------~~~~~~v~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~ 347 (478)
..+. ..++++++.|+||.+.|+||++|++.+|+|++|.++ +++.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~i~gG~~~NviP~~~~~~~d~R~~p~~~-~~i~~~ 316 (426)
T PRK07906 238 RAFLDGVAELTGLEFDPDDPDALLAKLGPAARMVGATLRNTANPTMLKAGYKVNVIPGTAEAVVDGRFLPGRE-EEFLAT 316 (426)
T ss_pred HHHHHHhhhhcCcccCcccHHHHHHHHhhcCcchhhhhcccccceeEeccCccccCCCceEEEEEEeECCCCc-HHHHHH
Confidence 0000 135899999999999999999999999999999986 666666
Q ss_pred HHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHh-cccceEE
Q 011730 348 IEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV-VPAAFYY 426 (478)
Q Consensus 348 i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~-iP~~~~~ 426 (478)
|++++. .++++++... .+. ..+..++++++.+++++++.++.... .+....|+||+++|... +|++.
T Consensus 317 i~~~~~-------~~v~~~~~~~-~~~-~~~~~~~~~v~~l~~a~~~~~~~~~~-~~~~~~ggtDa~~~~~~g~p~~~-- 384 (426)
T PRK07906 317 VDELLG-------PDVEREWVHR-DPA-LETPFDGPLVDAMNAALLAEDPGARV-VPYMLSGGTDAKAFSRLGIRCYG-- 384 (426)
T ss_pred HHHHhC-------CCeEEEEecC-CCC-CCCCCCcHHHHHHHHHHHHHCCCCeE-eeeeecccCcHHHHHhcCCceEE--
Confidence 666542 2355554421 122 23456789999999999986532211 23446778999999864 67654
Q ss_pred ecccCCCCC--CCCCCCCCCcccCcCchHHHHHHHHHHHHH
Q 011730 427 IGIKNETLG--SIHTGHSPYFMIDEDVLPVGAAVHATIAER 465 (478)
Q Consensus 427 ~G~~~~~~~--~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ 465 (478)
+|++....+ ...++|++||++++++|.+++++|++++.+
T Consensus 385 ~gp~~~~~~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~ 425 (426)
T PRK07906 385 FAPLRLPPDLDFAALFHGVDERVPVDALRFGVRVLDRFLRT 425 (426)
T ss_pred EeccccCccccccccCcCCCCceeHHHHHHHHHHHHHHHHh
Confidence 344321000 014699999999999999999999999865
No 43
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-39 Score=337.90 Aligned_cols=361 Identities=20% Similarity=0.250 Sum_probs=269.6
Q ss_pred cchHHHHHHHHHHhhcCCCCC-cchHHHHHHHHHHHHhCCCcEEecc-C----CceEEEEEcCCC-CcEEEEEEcccccc
Q 011730 94 PETVDWLKSVRRTIHQNPELA-FQEFETSRLLRAELDRMEIGYKYPL-A----KTGIRAWVGTGG-PPFVALRADMDALP 166 (478)
Q Consensus 94 ~~~~~~l~~l~~~L~~iPs~s-~~E~~~a~~l~~~L~~~G~~v~~~~-~----~~~via~~g~~~-~p~v~~~aHlDvVP 166 (478)
...++++++++++|++|||++ ..+.++++++.++|+++|+.++... . ..|++++++++. +|.|+|+||+||||
T Consensus 9 ~~~~~~~~~~l~~lv~~~s~s~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~n~~~~~~~~~~~~~l~l~~H~DvVP 88 (409)
T COG0624 9 LDLLDDILELLKELVRIPSVSAGEEAEAAELLAEWLEELGFEVEEDEVGPGPGRPNLVARLGGGDGGPTLLLGGHLDVVP 88 (409)
T ss_pred HHhhHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHcCCceEEeecCCCCCceEEEEEecCCCCCCeEEEeccccccC
Confidence 455778889999999999999 8999999999999999999876542 2 358999996653 39999999999999
Q ss_pred CCC---CCCCCcccc-cCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC--------CCccCCC-cHHHHHHcCC---
Q 011730 167 IQE---AVEWEYKSK-VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLK--------PAEEAGN-GAKRMMADGA--- 227 (478)
Q Consensus 167 ~~~---~~~~Pf~~~-~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~--------~dEE~g~-G~~~l~~~g~--- 227 (478)
+++ |+.+||++. ++|++||||. | |.+++++.|++.+.+.+..++ .|||.++ |...++..+.
T Consensus 89 ~g~~~~W~~~Pf~~~~~dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~~~~~~~~~ 168 (409)
T COG0624 89 AGGGEDWTTDPFEPTIKDGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDVRLLFTADEESGGAGGKAYLEEGEEAL 168 (409)
T ss_pred CCCcccCccCCCccEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCeEEEEEEEeccccCCcchHHHHHhcchhh
Confidence 876 667799986 5689999998 3 889999999999998654332 9999874 6666666653
Q ss_pred CCCCcEEEEEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCC--CCCCCCHHHHHHHHHHHHHhhhhcccCC-C
Q 011730 228 LEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAAN--PHRSVDPVLAASAAVISLQGLVSREANP-L 304 (478)
Q Consensus 228 ~~~~D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~--p~~g~NAi~~~~~~i~~l~~l~~~~~~~-~ 304 (478)
...+|++|+.+++.....+..... + .+|..+++++++|+++|+|. |+.+.|++..+...+.++.....+...+ +
T Consensus 169 ~~~~d~~i~~E~~~~~~~~~~~~~-~--~kG~~~~~v~v~G~~~Has~~~p~~~~n~i~~a~~~~~~~~~~~~~~~~~~~ 245 (409)
T COG0624 169 GIRPDYEIVGEPTLESEGGDIIVV-G--HKGSLWLEVTVKGKAGHASTTPPDLGRNPIHAAIEALAELIEELGDLAGEGF 245 (409)
T ss_pred ccCCCEEEeCCCCCcccCCCeEEE-c--ceeEEEEEEEEEeecccccccCCcccccHHHHHHHHHHHHHHHhcccccccc
Confidence 236899999987321122222222 2 34899999999999999998 9999995544444444443322211112 2
Q ss_pred C-CcEEEEEEEeCCC--------ccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCC
Q 011730 305 D-SQVVSVTYFNGGD--------HLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVY 375 (478)
Q Consensus 305 ~-~~~~~v~~i~gG~--------~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~ 375 (478)
. ..+++++.+.+|. ..|+||++|++.+|+|+.|.++.+++.+.+++.++..+...++++++..... ...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~nviP~~~~~~~d~R~~p~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~--~~~ 323 (409)
T COG0624 246 DGPLGLNVGLILAGPGASVNGGDKVNVIPGEAEATVDIRLLPGEDLDDVLEELEAELRAIAPKEGVEYEIEPGLG--EPP 323 (409)
T ss_pred cCCccccccccccCCcccccCCccCceecceEEEEEEEecCCcCCHHHHHHHHHHHHHHhccccCceEEeccccC--Ccc
Confidence 2 3566666555554 4699999999999999999999999999999999887654345555543111 223
Q ss_pred CCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHh-cccceEEecccCCCCCCCCCCCCCCcccCcCchHH
Q 011730 376 PPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV-VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPV 454 (478)
Q Consensus 376 ~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~-iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~ 454 (478)
.++..++++++.+++++++.+|.+.. ....++++|+.++... +| + ..+|++.. ..+|++||+++++++.+
T Consensus 324 ~~~~~~~~~v~~l~~~~~~~~g~~~~--~~~~G~~~da~~~~~~~~~-~-~~fgp~~~-----~~~H~~~E~v~i~~l~~ 394 (409)
T COG0624 324 LPVPGDSPLVAALAEAAEELLGLPPE--VSTGGGTHDARFFARLGIP-A-VIFGPGDI-----GLAHQPNEYVELEDLVK 394 (409)
T ss_pred ccCCCchHHHHHHHHHHHHhhCCCce--ecCCCCcchHHHHHhcCCe-e-EEECCCCc-----ccccCCCceeeHHHHHH
Confidence 34567889999999999997787632 3444467999998876 57 3 33566542 47999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 011730 455 GAAVHATIAERFLN 468 (478)
Q Consensus 455 ~~~i~a~~~~~ll~ 468 (478)
++++|++++.+|+.
T Consensus 395 ~~~~~~~~l~~l~~ 408 (409)
T COG0624 395 GAKVLARLLYELAE 408 (409)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999875
No 44
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=3.2e-39 Score=335.46 Aligned_cols=337 Identities=16% Similarity=0.221 Sum_probs=258.4
Q ss_pred HHHHHHHHHHhhcC-C---------CCCcchHHHHHHHHHHHHhCCCcEEeccCCceEEEEEcC-C-CCcEEEEEEcccc
Q 011730 97 VDWLKSVRRTIHQN-P---------ELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGT-G-GPPFVALRADMDA 164 (478)
Q Consensus 97 ~~~l~~l~~~L~~i-P---------s~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~g~-~-~~p~v~~~aHlDv 164 (478)
.+.+++++++|++| + |+|++|.++++||.++|+++||+++.. ...|+++++++ + ++|.|+|+|||||
T Consensus 6 ~~~~~~~~~~l~~~~~~~~~g~~~~s~s~~e~~~a~~l~~~l~~~g~~~~~~-~~~nl~a~~~g~~~~~~~l~l~gH~Dt 84 (413)
T PRK09290 6 AERLWARLDELAKIGATPDGGVTRLALSPEDLQARDLFAEWMEAAGLTVRVD-AVGNLFGRLEGRDPDAPAVLTGSHLDT 84 (413)
T ss_pred HHHHHHHHHHHhcccCCCCCceeeccCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCCEEEEecCccC
Confidence 46777888888887 3 778999999999999999999998764 44699999954 2 3589999999999
Q ss_pred ccCCCCCCCCcccccCCeEEeCcchHHHHHHHHHHHHHHhcCCCCC--------CCccCC------CcHHHHHHc-----
Q 011730 165 LPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLK--------PAEEAG------NGAKRMMAD----- 225 (478)
Q Consensus 165 VP~~~~~~~Pf~~~~~G~~~g~G~dg~~a~~l~aa~~L~~~~~~l~--------~dEE~g------~G~~~l~~~----- 225 (478)
||++. ..+| .+++|+++.|++.|++.+..++ +|||.+ .|++.+++.
T Consensus 85 Vp~~g------------~~d~---k~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~G~~~~~~~~~~~~ 149 (413)
T PRK09290 85 VPNGG------------RFDG---PLGVLAGLEAVRTLNERGIRPRRPIEVVAFTNEEGSRFGPAMLGSRVFTGALTPED 149 (413)
T ss_pred CCCCC------------CcCC---HHHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCccccccCccccHHHHHcccCHHH
Confidence 99742 2222 2478888888899987764332 999974 267666522
Q ss_pred -------------------CCCCCCcEEEEE--ecCCC--------------CCcc-eEEeecccccceeeEEEEEEEee
Q 011730 226 -------------------GALEDVEAIFAV--HVSHE--------------HPTG-VIGSRPGPLLAGCGFFHAVISGK 269 (478)
Q Consensus 226 -------------------g~~~~~D~~i~~--~~~~~--------------~~~g-~i~~~~g~~~~g~~~~~i~v~G~ 269 (478)
| + +.|++++. +|+.. .|.+ ...+. ..++|..+++|+++|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~-~-~~d~~i~~~~ept~~~~~~~~~~~~~~~~e~~~~~~~i~--~~~kG~~~~~i~v~Gk 225 (413)
T PRK09290 150 ALALRDADGVSFAEALAAIG-Y-DGDEAVGAARARRDIKAFVELHIEQGPVLEAEGLPIGVV--TGIVGQRRYRVTFTGE 225 (413)
T ss_pred HHhccCCCCCCHHHHHHHcC-C-ChhhccccccCCCCccEEEEEEeccCHHHHHCCCcEEEE--eeeeccEEEEEEEEEE
Confidence 2 2 45666654 44321 0111 11112 2234789999999999
Q ss_pred cCCCC-CC-CCCCCHHHHHHHHHHHHHhhhhcccCCCCCcEEEEEEEeCC-CccceecCcEEEEEEEeccChHhHHHHHH
Q 011730 270 KGGAA-NP-HRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGG-DHLDMIPDAVVIGGTLRAFSNTSFYQLLQ 346 (478)
Q Consensus 270 ~~Has-~p-~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~v~~i~gG-~~~NvIP~~a~~~~diR~~p~~~~~~i~~ 346 (478)
++|+| .| +.|.|||..+++++.+|+++..+.. ...+++++.+++| .+.|+||++|++.+|+|++|.++.+++.+
T Consensus 226 ~aHas~~P~~~g~NAI~~~~~~i~~l~~l~~~~~---~~~~~~~g~i~~g~~~~NvIP~~a~~~~diR~~p~e~~e~v~~ 302 (413)
T PRK09290 226 ANHAGTTPMALRRDALLAAAEIILAVERIAAAHG---PDLVATVGRLEVKPNSVNVIPGEVTFTLDIRHPDDAVLDALVA 302 (413)
T ss_pred CCCCCCCCchhccCHHHHHHHHHHHHHHHHHhcC---CCeEEEEEEEEEcCCCCeEECCEEEEEEEEeCCCHHHHHHHHH
Confidence 99998 58 5899999999999999988743221 2357899999965 79999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHhcccceEE
Q 011730 347 RIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYY 426 (478)
Q Consensus 347 ~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~iP~~~~~ 426 (478)
+|++++++.+..+++++++.... .++++.+|+++++.+++++++ +|.++. ...+++++|+++|+..+|+++++
T Consensus 303 ~i~~~~~~~~~~~~~~~e~~~~~----~~~~~~~d~~lv~~l~~a~~~-~g~~~~--~~~~~g~tDa~~~~~~iP~~~~~ 375 (413)
T PRK09290 303 ELRAAAEAIAARRGVEVEIELIS----RRPPVPFDPGLVAALEEAAER-LGLSYR--RLPSGAGHDAQILAAVVPTAMIF 375 (413)
T ss_pred HHHHHHHHHHHHcCCeEEEEEEe----cCCCccCCHHHHHHHHHHHHH-cCCCcc--ccCCccchHHHHHhccCCEEEEE
Confidence 99999999877778888776542 356677889999999999977 476542 35578899999998789986654
Q ss_pred ecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHHhh
Q 011730 427 IGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 469 (478)
Q Consensus 427 ~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll~~ 469 (478)
+| +.. ..+|++||++++++|.+++++|++++.+|++.
T Consensus 376 gp-~~~-----~~~H~~dE~v~i~~l~~~~~v~~~~l~~l~~~ 412 (413)
T PRK09290 376 VP-SVG-----GISHNPAEFTSPEDCAAGANVLLHALLELAEE 412 (413)
T ss_pred ec-cCC-----CCCCCccccCCHHHHHHHHHHHHHHHHHHhcc
Confidence 43 321 35899999999999999999999999998764
No 45
>PRK07318 dipeptidase PepV; Reviewed
Probab=100.00 E-value=7.3e-40 Score=345.12 Aligned_cols=351 Identities=16% Similarity=0.092 Sum_probs=257.1
Q ss_pred HHHHhcCcchHHHHHHHHHHhhcCCCCCcc------------hHHHHHHHHHHHHhCCCcEEeccCCceEEEEEc-CCCC
Q 011730 87 VMELARRPETVDWLKSVRRTIHQNPELAFQ------------EFETSRLLRAELDRMEIGYKYPLAKTGIRAWVG-TGGP 153 (478)
Q Consensus 87 ~~~~~~~~~~~~~l~~l~~~L~~iPs~s~~------------E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~g-~~~~ 153 (478)
+.+++ +++++++++++++|++|||++++ +.++++||.++|+++||+++... |+++++. +.+.
T Consensus 5 ~~~~~--~~~~~~~~~~l~~lv~i~S~~~~~~~~~~~p~~~~~~~~~~~l~~~~~~~G~~~~~~~---n~~~~~~~~~~~ 79 (466)
T PRK07318 5 WKKEV--EKRKDDLIEDLQELLRINSVRDDSKAKEGAPFGPGPVKALEKFLEIAERDGFKTKNVD---NYAGHIEYGEGE 79 (466)
T ss_pred HHHHH--HHhHHHHHHHHHHHhccCcccCCcccccCCCCCccHHHHHHHHHHHHHHCCCEEEEec---CccceEEECCCC
Confidence 67777 88899999999999999999865 56899999999999999987542 5555542 2235
Q ss_pred cEEEEEEccccccCCC-CCCCCcccc-cCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC--------CCccCCC-cH
Q 011730 154 PFVALRADMDALPIQE-AVEWEYKSK-VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLK--------PAEEAGN-GA 219 (478)
Q Consensus 154 p~v~~~aHlDvVP~~~-~~~~Pf~~~-~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~--------~dEE~g~-G~ 219 (478)
|+|+|+||+||||+++ |+.+||.+. ++|++||||+ | |++++++.|++.|++.+..+. +|||.|+ |+
T Consensus 80 ~~l~l~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~DmKgg~aa~l~Al~~l~~~g~~~~~~i~l~~~~DEE~g~~G~ 159 (466)
T PRK07318 80 EVLGILGHLDVVPAGDGWDTDPYEPVIKDGKIYARGTSDDKGPTMAAYYALKIIKELGLPLSKKVRFIVGTDEESGWKCM 159 (466)
T ss_pred CEEEEEEecCCCCCCCCCCCCCcceEEECCEEEEcccccCcHHHHHHHHHHHHHHHcCCCCCccEEEEEEcccccCchhH
Confidence 8999999999999864 678899975 5799999997 3 888989999999988664432 9999874 99
Q ss_pred HHHHHcCCCCCCcE---------EEEEecCC-----------------------CCCcceE------E------------
Q 011730 220 KRMMADGALEDVEA---------IFAVHVSH-----------------------EHPTGVI------G------------ 249 (478)
Q Consensus 220 ~~l~~~g~~~~~D~---------~i~~~~~~-----------------------~~~~g~i------~------------ 249 (478)
+++++.... .++ ++..|++. +.+.+.+ .
T Consensus 160 ~~l~~~~~~--~~~~~~~d~~~~vi~~E~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~ 237 (466)
T PRK07318 160 DYYFEHEEA--PDFGFSPDAEFPIINGEKGITTFDLVHFEGENEGDYVLVSFKSGLRENMVPDSAEAVITGDDLDDLIAA 237 (466)
T ss_pred HHHHHhCCC--CCEEEEeCCCCcEEEEEeeeEEEEEEeccccCCCCceeEEEEcCccceecCcccEEEEecCCHHHHHHH
Confidence 999887421 122 23333211 0011100 0
Q ss_pred --------eecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhh------h----h-------------
Q 011730 250 --------SRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGL------V----S------------- 298 (478)
Q Consensus 250 --------~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l------~----~------------- 298 (478)
.+.|....+..+++|+++|+++|+|.|+.|.|||..|+++|..|+.. . .
T Consensus 238 ~~~~~~~~~~kG~~~~~~~~~~i~v~G~aaH~s~p~~g~NAI~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (466)
T PRK07318 238 FEAFLAENGLKGELEEEGGKLVLTVIGKSAHGSTPEKGVNAATYLAKFLNQLNLDGDAKAFLDFAAEYLHEDTRGEKLGI 317 (466)
T ss_pred HHHHHhhcCceEEEEecCCEEEEEEEeeEcccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCCcccCCC
Confidence 01111111234799999999999999999999999999999998641 0 0
Q ss_pred -cccCCCCCcEEEEEEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCC
Q 011730 299 -REANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPP 377 (478)
Q Consensus 299 -~~~~~~~~~~~~v~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~ 377 (478)
......+..++|++.|+||... +|++.+|+|+.|+++.+++.++|++.+++ ..+++++.. .+++
T Consensus 318 ~~~~~~~g~~t~nvg~i~gg~~~-----~~~~~iDiR~~p~~~~~~v~~~i~~~~~~------~~~~~~~~~----~~~p 382 (466)
T PRK07318 318 AYEDDVMGDLTMNVGVFSFDEEK-----GGTLGLNFRYPVGTDFEKIKAKLEKLIGV------TGVELSEHE----HQKP 382 (466)
T ss_pred cccCCCccCeEEEeeEEEEecCc-----EEEEEEEEeCCCCCCHHHHHHHHHHHHHh------cCeEEEEcc----CCCc
Confidence 0011124568999999998532 79999999999999999999999998765 234554432 2333
Q ss_pred --ccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHhcccceEEecccCCCCCCCCCCCCCCcccCcCchHHH
Q 011730 378 --TVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVG 455 (478)
Q Consensus 378 --~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~ 455 (478)
...++++++.+++++++.+|.++. ...++|++|++++...+|.... +++ ...++|++||+++++++.++
T Consensus 383 ~~~~~d~~lv~~l~~a~~~~~g~~~~--~~~~~ggtDa~~~~~~i~~Gp~--~pg-----~~~~aH~~dE~v~i~~l~~~ 453 (466)
T PRK07318 383 HYVPKDDPLVKTLLKVYEKQTGLKGE--EQVIGGGTYARLLKRGVAFGAM--FPG-----SEDTMHQANEYIEIDDLIKA 453 (466)
T ss_pred eeeCCCCHHHHHHHHHHHHHhCCCCC--eeEEcchHhHhhCCCeEEeCCC--CCC-----CCCCCcCCCcceeHHHHHHH
Confidence 346789999999999987887643 3456789999998654542211 122 12459999999999999999
Q ss_pred HHHHHHHHHHHHh
Q 011730 456 AAVHATIAERFLN 468 (478)
Q Consensus 456 ~~i~a~~~~~ll~ 468 (478)
+++|++++.++++
T Consensus 454 ~~v~~~~l~~~~~ 466 (466)
T PRK07318 454 AAIYAEAIYELAK 466 (466)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998864
No 46
>PRK05469 peptidase T; Provisional
Probab=100.00 E-value=3.3e-39 Score=334.89 Aligned_cols=345 Identities=17% Similarity=0.164 Sum_probs=260.2
Q ss_pred HHHHHHHHHhhcCCCCCcc----------hHHHHHHHHHHHHhCCCc-EEeccCCceEEEEEcCC---CCcEEEEEEccc
Q 011730 98 DWLKSVRRTIHQNPELAFQ----------EFETSRLLRAELDRMEIG-YKYPLAKTGIRAWVGTG---GPPFVALRADMD 163 (478)
Q Consensus 98 ~~l~~l~~~L~~iPs~s~~----------E~~~a~~l~~~L~~~G~~-v~~~~~~~~via~~g~~---~~p~v~~~aHlD 163 (478)
+++++.+++|++|||.|.+ |.++++||.++|+++|++ ++. ....||++.+++. ++|+|+|+||||
T Consensus 2 ~~~~~~l~~~~~i~s~s~~~~~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~-~~~~~v~~~~~g~~~~~~~~i~l~~H~D 80 (408)
T PRK05469 2 DKLLERFLRYVKIDTQSDENSTTVPSTEGQWDLAKLLVEELKELGLQDVTL-DENGYVMATLPANVDKDVPTIGFIAHMD 80 (408)
T ss_pred chHHHHHHhhEEeecccCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeEEE-CCCeEEEEEecCCCCCCCCeEEEEEecc
Confidence 4678899999999999976 889999999999999997 543 3445799998432 359999999999
Q ss_pred cccCCCC-CC--------------------CCcccc--------cCCeEEeCcc-----h--HHHHHHHHHHHHHHhcCC
Q 011730 164 ALPIQEA-VE--------------------WEYKSK--------VAGKMHACGH-----D--AHVAMLIGAAKILKSREH 207 (478)
Q Consensus 164 vVP~~~~-~~--------------------~Pf~~~--------~~G~~~g~G~-----d--g~~a~~l~aa~~L~~~~~ 207 (478)
|||+.+. .. |+|.+. ..+.+||||. | +++++++.|+++|++.+.
T Consensus 81 ~vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~rG~~~lg~D~Kgglaa~l~a~~~l~~~~~ 160 (408)
T PRK05469 81 TAPDFSGKNVKPQIIENYDGGDIALGDGNEVLSPAEFPELKNYIGQTLITTDGTTLLGADDKAGIAEIMTALEYLIAHPE 160 (408)
T ss_pred CCCCCCCCCCCCEEeccCCCcceecCCCceEechHhCchHHhccCCCEEEcCCCEeecccchHHHHHHHHHHHHHHhCCC
Confidence 9997442 11 222111 1245677663 3 889999999999987653
Q ss_pred CCC--------CCccCCCcHHHHHHcCCCCCCcEEEEEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCC-CCC
Q 011730 208 LLK--------PAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAAN-PHR 278 (478)
Q Consensus 208 ~l~--------~dEE~g~G~~~l~~~g~~~~~D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~-p~~ 278 (478)
.++ +|||.+.|++.++.++. ..|+++..++. +.|.+... ..|..+++|+++|+++|++. |+.
T Consensus 161 ~~~g~v~~~f~~dEE~g~Ga~~~~~~~~--~~~~~~~~~~~---~~g~~~~~----~~g~~~~~i~v~Gk~~Ha~~~p~~ 231 (408)
T PRK05469 161 IKHGDIRVAFTPDEEIGRGADKFDVEKF--GADFAYTVDGG---PLGELEYE----NFNAASAKITIHGVNVHPGTAKGK 231 (408)
T ss_pred CCCCCEEEEEecccccCCCHHHhhhhhc--CCcEEEEecCC---CcceEEec----cCceeEEEEEEeeecCCCCCCccc
Confidence 332 99998778888865543 35677666542 33444332 23667899999999999875 899
Q ss_pred CCCHHHHHHHHHHHHHhhhhcccCCCCCcEEEEEEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhh
Q 011730 279 SVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARV 358 (478)
Q Consensus 279 g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~v~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~ 358 (478)
|.|||..+++++..|+++..+........+++++.++|| |++|++.+++|+.+.++.+.+.++|++++++.+..
T Consensus 232 g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~~g~i~gg------p~~~~i~~diR~~~~e~~e~i~~~i~~~~~~~~~~ 305 (408)
T PRK05469 232 MVNALLLAADFHAMLPADETPETTEGYEGFYHLTSIKGT------VEEAELSYIIRDFDREGFEARKALMQEIAKKVNAK 305 (408)
T ss_pred ccCHHHHHHHHHHhCCCCCCCCCCCCceEEEEEEEEEEc------cceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998876432222222345678888776 89999999999999999999999999999998877
Q ss_pred c-CCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHH-hcccceEEecccCCCCCC
Q 011730 359 F-RCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGS 436 (478)
Q Consensus 359 ~-g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~-~iP~~~~~~G~~~~~~~~ 436 (478)
+ ++++++++.......++++.+++++++.+++++++ +|..+. ...+.+++|+++|+. .+|+++++ ++.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~a~~~-~g~~~~--~~~~~ggtD~~~~~~~giP~v~~g--pG~----- 375 (408)
T PRK05469 306 YGEGRVELEIKDQYYNMREKIEPHPHIVDLAKQAMED-LGIEPI--IKPIRGGTDGSQLSFMGLPCPNIF--TGG----- 375 (408)
T ss_pred cCCCeEEEEEeehhhhhhhhhcCCHHHHHHHHHHHHH-cCCCcE--EecCCCcccHHHHhhCCCceEEEC--cCc-----
Confidence 7 57777776521111123467889999999999998 576543 346789999999985 59997654 433
Q ss_pred CCCCCCCCcccCcCchHHHHHHHHHHHHHHHhh
Q 011730 437 IHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 469 (478)
Q Consensus 437 ~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll~~ 469 (478)
..+|++||++++++|..++++|.+++..++++
T Consensus 376 -~~~H~~~E~v~i~~l~~~~~~~~~~~~~~~~~ 407 (408)
T PRK05469 376 -HNFHGKFEFVSLESMEKAVEVIVEIAELTAER 407 (408)
T ss_pred -ccCcCcceeeEHHHHHHHHHHHHHHHHHHhcC
Confidence 24999999999999999999999999988764
No 47
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.4e-38 Score=330.56 Aligned_cols=339 Identities=17% Similarity=0.206 Sum_probs=257.6
Q ss_pred HHHHHHHHHHhhcCCCC----------CcchHHHHHHHHHHHHhCCCcEEeccCCceEEEEE-cCC-CCcEEEEEEcccc
Q 011730 97 VDWLKSVRRTIHQNPEL----------AFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWV-GTG-GPPFVALRADMDA 164 (478)
Q Consensus 97 ~~~l~~l~~~L~~iPs~----------s~~E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~-g~~-~~p~v~~~aHlDv 164 (478)
.+++++++++|++||+. |++|.++++||.++|+++||+++.. ...|+++++ +.+ ++|+|+|+||+||
T Consensus 9 ~~~~~~~l~~l~~i~s~~~~~~~~~~~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~n~~a~~~g~~~~~~~l~l~~H~Dt 87 (412)
T PRK12893 9 GERLWDSLMALARIGATPGGGVTRLALTDEDREARDLLAQWMEEAGLTVSVD-AIGNLFGRRAGTDPDAPPVLIGSHLDT 87 (412)
T ss_pred HHHHHHHHHHHhcccCCCCCcEEeccCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEeCCCCCCCCEEEEEecccC
Confidence 57899999999999954 4558999999999999999998763 345999999 434 3689999999999
Q ss_pred ccCCCCCCCCcccccCCeEEeCcchHHHHHHHHHHHHHHhcCCCCC--------CCccCC------CcHHHHHHcCCC--
Q 011730 165 LPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLK--------PAEEAG------NGAKRMMADGAL-- 228 (478)
Q Consensus 165 VP~~~~~~~Pf~~~~~G~~~g~G~dg~~a~~l~aa~~L~~~~~~l~--------~dEE~g------~G~~~l~~~g~~-- 228 (478)
||.+ |..+|+ ++++++|.|++.|++.+..++ +|||.+ .|+..+......
T Consensus 88 Vp~~------------g~~dgk---~gvaa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~G~~~~~~~~~~~~ 152 (412)
T PRK12893 88 QPTG------------GRFDGA---LGVLAALEVVRTLNDAGIRTRRPIEVVSWTNEEGARFAPAMLGSGVFTGALPLDD 152 (412)
T ss_pred CCCC------------Ccccch---hhHHHHHHHHHHHHHcCCCCCCCeEEEEEccccccccccccccHHHHhCcCChHH
Confidence 9964 333443 467788899999998765432 999975 267666543110
Q ss_pred -----------------------------CCCcEEEEEecCCCC---Ccc-eEEeecccccceeeEEEEEEEeecCCCCC
Q 011730 229 -----------------------------EDVEAIFAVHVSHEH---PTG-VIGSRPGPLLAGCGFFHAVISGKKGGAAN 275 (478)
Q Consensus 229 -----------------------------~~~D~~i~~~~~~~~---~~g-~i~~~~g~~~~g~~~~~i~v~G~~~Has~ 275 (478)
...|..+.+|...+. +.+ ...+. ..++|..+++|+++|+++|+|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~--~~~kG~~~~~i~v~G~~aHas~ 230 (412)
T PRK12893 153 ALARRDADGITLGEALARIGYRGTARVGRRAVDAYLELHIEQGPVLEAEGLPIGVV--TGIQGIRWLEVTVEGQAAHAGT 230 (412)
T ss_pred HHhccCCCCCCHHHHHHHcCCCcccccccCCccEEEEEEeccCHHHHHCCCcEEEE--eeecccEEEEEEEEEECCCcCC
Confidence 012334444431110 000 11111 2245789999999999999996
Q ss_pred -CC-CCCCHHHHHHHHHHHHHhhhhcccCCCCCcEEEEEEEeCC-CccceecCcEEEEEEEeccChHhHHHHHHHHHHHH
Q 011730 276 -PH-RSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGG-DHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVI 352 (478)
Q Consensus 276 -p~-~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~v~~i~gG-~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~ 352 (478)
|+ .|+|||..+++++.+|+++..+. . ...+++++.++|| .+.|+||++|++.+|+|++|.++.+++.++|++++
T Consensus 231 ~p~~~G~NAI~~a~~~i~~l~~~~~~~-~--~~~~~~vg~i~ggg~~~NvVP~~a~~~~diR~~p~~~~~~i~~~i~~~~ 307 (412)
T PRK12893 231 TPMAMRRDALVAAARIILAVERIAAAL-A--PDGVATVGRLRVEPNSRNVIPGKVVFTVDIRHPDDARLDAMEAALRAAC 307 (412)
T ss_pred CcchhccCHHHHHHHHHHHHHHHHHhc-C--CCceEEEEEEEeeCCCceEECCeeEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence 85 79999999999999999875322 1 2467899999984 79999999999999999999999999999999999
Q ss_pred HHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHhcccceEEecccCC
Q 011730 353 VEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNE 432 (478)
Q Consensus 353 ~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~iP~~~~~~G~~~~ 432 (478)
++.+..++++++++.. ..++++.+++++++.+++++++ +|.++. ...++++||+++|++.+|+++++ |++..
T Consensus 308 ~~~~~~~~~~v~~~~~----~~~~~~~~d~~l~~~l~~~~~~-~g~~~~--~~~~~g~tD~~~~~~~~p~~v~~-gp~~~ 379 (412)
T PRK12893 308 AKIAAARGVQVTVETV----WDFPPVPFDPALVALVEAAAEA-LGLSHM--RMVSGAGHDAMFLARVAPAAMIF-VPCRG 379 (412)
T ss_pred HHHHHHcCCeEEEEEE----ecCCCcCCCHHHHHHHHHHHHH-cCCCcc--ccCCccHHHHHHHHhhCCEEEEE-eecCC
Confidence 9987777777777654 2356677889999999999887 576542 35677899999998888865544 44322
Q ss_pred CCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHHhh
Q 011730 433 TLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 469 (478)
Q Consensus 433 ~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll~~ 469 (478)
..+|++||++++++|.+++++|++++.+++.+
T Consensus 380 -----~~~Hs~dE~v~i~~l~~~~~i~~~ll~~~~~~ 411 (412)
T PRK12893 380 -----GISHNEAEDTEPADLAAGANVLLHAVLELAGR 411 (412)
T ss_pred -----CCCCCccccCCHHHHHHHHHHHHHHHHHhhcc
Confidence 35899999999999999999999999998653
No 48
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=100.00 E-value=2.3e-39 Score=327.62 Aligned_cols=324 Identities=13% Similarity=0.129 Sum_probs=246.5
Q ss_pred HHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEeccCCceEEEEEcCCCCcEEEEEEccccccCCCCCCCCccc-ccC
Q 011730 102 SVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKS-KVA 180 (478)
Q Consensus 102 ~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~g~~~~p~v~~~aHlDvVP~~~~~~~Pf~~-~~~ 180 (478)
+++++|++|||++++|.++++||.++|+++||++.. ....|+++..+++ +|+|+|+|||||||. +|.. .++
T Consensus 1 ~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~-~~~~~~~~~~~~~-~~~i~~~~H~D~vp~------~~~~~~~~ 72 (336)
T TIGR01902 1 ELLKDLLEIYSPSGKEANAAKFLEEISKDLGLKLII-DDAGNFILGKGDG-HKKILLAGHVDTVPG------YIPVKIEG 72 (336)
T ss_pred ChHHHHhcCCCCCcchHHHHHHHHHHHHHcCCEEEE-CCCCcEEEEeCCC-CceEEEEccccccCC------CcccEEeC
Confidence 368899999999999999999999999999999853 3345788876433 699999999999994 2433 357
Q ss_pred CeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC----CCccCC-CcHHHHHHcCCCCCCcEEEEEecCCCCCcceEEeec
Q 011730 181 GKMHACGH-D--AHVAMLIGAAKILKSREHLLK----PAEEAG-NGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRP 252 (478)
Q Consensus 181 G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~----~dEE~g-~G~~~l~~~g~~~~~D~~i~~~~~~~~~~g~i~~~~ 252 (478)
|++||||. | +.+++++.|++.|++.+.++. +|||.+ .|++.+++... .+++++.||+.. +.+..
T Consensus 73 g~i~GrG~~D~Kg~~aa~l~a~~~l~~~~~~i~~~~~~dEE~g~~G~~~~~~~~~---~~~~ii~ept~~---~~i~~-- 144 (336)
T TIGR01902 73 GLLYGRGAVDAKGPLIAMIFATWLLNEKGIKVIVSGLVDEESSSKGAREVIDKNY---PFYVIVGEPSGA---EGITL-- 144 (336)
T ss_pred CEEEEecccCCCcHHHHHHHHHHHHHhCCCcEEEEEEeCcccCCccHHHHHhhcC---CCEEEEecCCCC---cceee--
Confidence 99999998 3 888888899998987665443 899986 49998888743 458899998642 12221
Q ss_pred ccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhcccCCCCCcEEEEEEEeCCCccceecCcEEEEEE
Q 011730 253 GPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGT 332 (478)
Q Consensus 253 g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~v~~i~gG~~~NvIP~~a~~~~d 332 (478)
+ ++|..+++++++|+++|+|.|+ ||+..+..++..|.+..... ......+++++.++||.+.|+||++|++.+|
T Consensus 145 ~--~kG~~~~~v~~~G~~~Hss~~~---~ai~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~i~gg~~~nvIP~~a~~~id 218 (336)
T TIGR01902 145 G--YKGSLQLKIMCEGTPFHSSSAG---NAAELLIDYSKKIIEVYKQP-ENYDKPSIVPTIIRFGESYNDTPAKLELHFD 218 (336)
T ss_pred e--eeeEEEEEEEEEecCcccCCCh---hHHHHHHHHHHHHHHHhccc-cCCCCCcceeEEEEccCCCcCCCceEEEEEE
Confidence 2 2478999999999999999875 48999999999887422111 1122346788899999999999999999999
Q ss_pred EeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccch
Q 011730 333 LRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAED 412 (478)
Q Consensus 333 iR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD 412 (478)
+|+.|.++.+++.+++++. ..++++.... .+++ .+..++++++.+++++++. +.++. ...+.|++|
T Consensus 219 iR~~p~~~~~~~~~~i~~~---------~~~~~~~~~~-~~p~-~~~~~~~lv~~~~~a~~~~-~~~~~--~~~~~g~tD 284 (336)
T TIGR01902 219 LRYPPNNKPEEAIKEITDK---------FPICLEIVDE-TPPY-KVSRNNPLVRAFVRAIRKQ-GMKPR--LKKKTGTSD 284 (336)
T ss_pred EeeCCCCCHHHHHHHHHhc---------cCceEEEEec-cCce-ecCCCCHHHHHHHHHHHHc-CCCeE--EeeccccCc
Confidence 9999999999988887751 2233433321 1211 2346789999999999985 54432 234568899
Q ss_pred HHHHHHh--cccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHHh
Q 011730 413 FSFYSEV--VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 468 (478)
Q Consensus 413 ~~~~~~~--iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll~ 468 (478)
++++.+. +|++. +|++.. ..+|++||+++++++.+++++|.+++.+|++
T Consensus 285 ~~~~~~~~g~p~v~--~Gpg~~-----~~aH~~nE~v~i~~l~~~~~~~~~~l~~l~~ 335 (336)
T TIGR01902 285 MNILAPIWTVPMVA--YGPGDS-----TLDHTPQEKISLAEYLIGIKTLMLAIEELWQ 335 (336)
T ss_pred cceeccccCCCeEE--ECCCCc-----ccCCCCcceeEHHHHHHHHHHHHHHHHHHhc
Confidence 9999764 56653 566542 3589999999999999999999999998865
No 49
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=7.4e-38 Score=325.17 Aligned_cols=338 Identities=16% Similarity=0.148 Sum_probs=254.8
Q ss_pred HHHHHHHHhhcC---C-------CCCcchHHHHHHHHHHHHhCCCcEEeccCCceEEEEEcC-C-CCcEEEEEEcccccc
Q 011730 99 WLKSVRRTIHQN---P-------ELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGT-G-GPPFVALRADMDALP 166 (478)
Q Consensus 99 ~l~~l~~~L~~i---P-------s~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~g~-~-~~p~v~~~aHlDvVP 166 (478)
++++.+..|-+| | +.+++|.++++||.++|+++||+++... ..|+++++.+ + ++|+|+|+|||||||
T Consensus 11 ~~~~~~~~~~~~~~~~~~g~~r~~~~~~e~~~~~~l~~~l~~~G~~v~~~~-~gNl~a~~~g~~~~~~~l~~~~H~DtVp 89 (414)
T PRK12891 11 RLWASLERMAQIGATPKGGVCRLALTDGDREARDLFVAWARDAGCTVRVDA-MGNLFARRAGRDPDAAPVMTGSHADSQP 89 (414)
T ss_pred HHHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCCCEEEECC-CCCEEEEecCCCCCCCeEEEEecccCCC
Confidence 556666666665 2 3456799999999999999999988753 4599999943 3 358999999999999
Q ss_pred CCCCCCCCcccccCCeEEeCcchHHHHHHHHHHHHHHhcCCCCC--------CCccCC------CcHHH-----------
Q 011730 167 IQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLK--------PAEEAG------NGAKR----------- 221 (478)
Q Consensus 167 ~~~~~~~Pf~~~~~G~~~g~G~dg~~a~~l~aa~~L~~~~~~l~--------~dEE~g------~G~~~----------- 221 (478)
.+. . .+..++++++|.|++.|++.+.++. +|||.+ .|++.
T Consensus 90 ~gg------------~---~D~k~Gv~a~l~a~~~l~~~~~~~~~~i~v~~~~dEE~~~f~~~~~Gs~~~~g~~~~~~~~ 154 (414)
T PRK12891 90 TGG------------R---YDGIYGVLGGLEVVRALNDAGIETERPVDVVIWTNEEGSRFAPSMVGSGVFFGVYPLEYLL 154 (414)
T ss_pred CCc------------c---ccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEecccccCcCCcccccHHHHhCCCCHHHHH
Confidence 642 1 1234678888899999998876543 999975 26643
Q ss_pred -------------HHHcCCCC-------CCcEEEEEecCCC---CCcc-eEEeecccccceeeEEEEEEEeecCCCC-CC
Q 011730 222 -------------MMADGALE-------DVEAIFAVHVSHE---HPTG-VIGSRPGPLLAGCGFFHAVISGKKGGAA-NP 276 (478)
Q Consensus 222 -------------l~~~g~~~-------~~D~~i~~~~~~~---~~~g-~i~~~~g~~~~g~~~~~i~v~G~~~Has-~p 276 (478)
+.+.|+.. ..++.+..|...+ .+.+ .+.+..+ ++|..+++|+++|+++|+| .|
T Consensus 155 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~e~h~e~g~vle~~~~~~~iv~~--~kG~~~~~v~v~Gk~aHa~~~P 232 (414)
T PRK12891 155 SRRDDTGRTLGEHLARIGYAGAEPVGGYPVHAAYELHIEQGAILERAGKTIGVVTA--GQGQRWYEVTLTGVDAHAGTTP 232 (414)
T ss_pred hccCCCCCCHHHHHHHCCCCcccccccCCCCEEEEEEeCCCHHHHHCCCcEEEEee--ccCcEEEEEEEEeECCCCCCCC
Confidence 33444321 1224444443221 0111 1122222 3478999999999999999 48
Q ss_pred C-CCCCHHHHHHHHHHHHHhhhhcccCCCCCcEEEEEEEeCC-CccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHH
Q 011730 277 H-RSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGG-DHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVE 354 (478)
Q Consensus 277 ~-~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~v~~i~gG-~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~ 354 (478)
+ .|.|||..+++++..|+++..+. ....++++|.|+|| .+.|+||++|++.+|+|++|.++.+++.++|++++++
T Consensus 233 ~~~g~nAI~~aa~~i~~l~~~~~~~---~~~~t~~vg~I~gG~~~~NvVP~~~~~~~diR~~~~e~~e~v~~~i~~~~~~ 309 (414)
T PRK12891 233 MAFRRDALVGAARMIAFLDALGRRD---APDARATVGMIDARPNSRNTVPGECFFTVEFRHPDDAVLDRLDAALRAELAR 309 (414)
T ss_pred cccccCHHHHHHHHHHHHHHHHHhc---CCCeEEEEEEEEeeCCCcceECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHH
Confidence 6 58999999999999999874321 12468999999997 6899999999999999999999999999999999998
Q ss_pred HHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHhcccceEEecccCCCC
Q 011730 355 QARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETL 434 (478)
Q Consensus 355 ~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~iP~~~~~~G~~~~~~ 434 (478)
.+..++++++++.. ..++++.+|+++++.+++++++ +|.+.. ...+++++|+.++...+|++++|++. ..
T Consensus 310 ~~~~~~~~~~~~~~----~~~~~~~~d~~lv~~l~~a~~~-~G~~~~--~~~~~ggtDa~~~~~giPt~~~~gp~-~~-- 379 (414)
T PRK12891 310 IADETGLRADIEQI----FGYAPAPFAPGCIDAVRDAARA-LGLSHM--DIVSGAGHDACFAARGAPTGMIFVPC-VD-- 379 (414)
T ss_pred HHHHhCCEEEEEEE----ecCCCcCCCHHHHHHHHHHHHH-cCCCce--ecCCcchHHHHHHHhhCCEEEEEEcC-CC--
Confidence 88777888877654 2456677889999999999876 576543 35678899999888789986654433 21
Q ss_pred CCCCCCCCCCcccCcCchHHHHHHHHHHHHHHHhhc
Q 011730 435 GSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEY 470 (478)
Q Consensus 435 ~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll~~~ 470 (478)
..+|++||++++++|..++++|+.++.++.+.-
T Consensus 380 ---~~aH~~dE~v~i~~l~~~~~il~~~l~~~~~~~ 412 (414)
T PRK12891 380 ---GLSHNEAEAITPEWFAAGADVLLRAVLQSAQEA 412 (414)
T ss_pred ---CCCCCccccCCHHHHHHHHHHHHHHHHHHhhhc
Confidence 358999999999999999999999999997653
No 50
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=3.5e-37 Score=320.36 Aligned_cols=334 Identities=17% Similarity=0.157 Sum_probs=247.8
Q ss_pred HHHHHHHHhhcC---------CCCCcchHHHHHHHHHHHHhCCCcEEeccCCceEEEEEcCC--CCcEEEEEEccccccC
Q 011730 99 WLKSVRRTIHQN---------PELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTG--GPPFVALRADMDALPI 167 (478)
Q Consensus 99 ~l~~l~~~L~~i---------Ps~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~g~~--~~p~v~~~aHlDvVP~ 167 (478)
++++.+..|.+| ||++++|.++++||.++|+++||++++. ...|+++++++. ++|+|+|+|||||||.
T Consensus 10 ~~~~~~~~~~~i~~~~~~~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~nlia~~~g~~~~~~~l~~~~H~DtVp~ 88 (414)
T PRK12890 10 RLLARLEELAAIGRDGPGWTRLALSDEERAARALLAAWMRAAGLEVRRD-AAGNLFGRLPGRDPDLPPLMTGSHLDTVPN 88 (414)
T ss_pred HHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCCCEEEEc-CCCcEEEEeCCCCCCCCEEEEeCcccCCCC
Confidence 445555555544 5789999999999999999999998874 346999999542 3689999999999996
Q ss_pred CCCCCCCcccccCCeEEeCcchHHHHHHHHHHHHHHhcCCCCC--------CCccCC------CcHHHHHHc--------
Q 011730 168 QEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLK--------PAEEAG------NGAKRMMAD-------- 225 (478)
Q Consensus 168 ~~~~~~Pf~~~~~G~~~g~G~dg~~a~~l~aa~~L~~~~~~l~--------~dEE~g------~G~~~l~~~-------- 225 (478)
+ |.. +..++++++|.+++.|++.+..++ +|||.+ .|++.+.+.
T Consensus 89 ~------------g~~---D~~~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~G~~~~~~~~~~~~~~~ 153 (414)
T PRK12890 89 G------------GRY---DGILGVLAGLEVVAALREAGIRPPHPLEVIAFTNEEGVRFGPSMIGSRALAGTLDVEAVLA 153 (414)
T ss_pred C------------CCc---CCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEecccccccCCccccHHHHHcccChHHHHh
Confidence 4 221 113578888888999987665432 999963 255544322
Q ss_pred ----------------CCCCCCcEEEE--EecCC-----------CC---Ccc-eEEeecccccceeeEEEEEEEeecCC
Q 011730 226 ----------------GALEDVEAIFA--VHVSH-----------EH---PTG-VIGSRPGPLLAGCGFFHAVISGKKGG 272 (478)
Q Consensus 226 ----------------g~~~~~D~~i~--~~~~~-----------~~---~~g-~i~~~~g~~~~g~~~~~i~v~G~~~H 272 (478)
|. ..|.+++ .+|+. +. +.+ ...+. ..++|..+++|+++|+++|
T Consensus 154 ~~~~~~~~~~~~~~~~g~--~~~~~~~~~~ep~~~~~~~~~h~~~g~~~~~~~~~~~i~--~~~kG~~~~~i~v~Gk~aH 229 (414)
T PRK12890 154 TRDDDGTTLAEALRRIGG--DPDALPGALRPPGAVAAFLELHIEQGPVLEAEGLPIGVV--TAIQGIRRQAVTVEGEANH 229 (414)
T ss_pred ccCCCCCCHHHHHHHcCC--ChhhccccccCCCCccEEEEEeeCcCHHHHhCCCceEEE--EeecCcEEEEEEEEEECCC
Confidence 21 1233222 23211 00 000 01111 1234789999999999999
Q ss_pred CCC-CCC-CCCHHHHHHHHHHHHHhhhhcccCCCCCcEEEEEEEeC-CCccceecCcEEEEEEEeccChHhHHHHHHHHH
Q 011730 273 AAN-PHR-SVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNG-GDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIE 349 (478)
Q Consensus 273 as~-p~~-g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~v~~i~g-G~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~ 349 (478)
+|. |+. +.|||..+++++.+|+++..+.. ...+++++.|++ |.+.|+||++|++.+|+|+.|.++.+++.++|+
T Consensus 230 as~~P~~~g~nAI~~~~~~i~~l~~~~~~~~---~~~~~~~g~i~~gg~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~ 306 (414)
T PRK12890 230 AGTTPMDLRRDALVAAAELVTAMERRARALL---HDLVATVGRLDVEPNAINVVPGRVVFTLDLRSPDDAVLEAAEAALL 306 (414)
T ss_pred CCcCChhhccCHHHHHHHHHHHHHHHHHhcC---CCeEEEEEEEEECCCCceEECCeEEEEEEeeCCCHHHHHHHHHHHH
Confidence 985 864 58999999999999998753321 346789999997 479999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHhcccceEEecc
Q 011730 350 EVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGI 429 (478)
Q Consensus 350 ~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~iP~~~~~~G~ 429 (478)
+++++.+..++++++++.. ..++++..++++++.+.+++++ +|.++. ...++++||+++|....|.++++ |+
T Consensus 307 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~-~g~~~~--~~~~~g~tDa~~~~~~gp~~~~~-gp 378 (414)
T PRK12890 307 AELEAIAAARGVRIELERL----SRSEPVPCDPALVDAVEAAAAR-LGYPSR--RMPSGAGHDAAAIARIGPSAMIF-VP 378 (414)
T ss_pred HHHHHHHHHhCCeEEEEEe----ecCCCcCCCHHHHHHHHHHHHH-cCCCce--ecCCcccHHHHHHHhhCCEEEEE-ec
Confidence 9999988777788877654 2456677889999999999987 576542 34578899999998766766544 33
Q ss_pred cCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHHh
Q 011730 430 KNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 468 (478)
Q Consensus 430 ~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll~ 468 (478)
+.. ..+|++||++++++|..++++|+.++.+|.+
T Consensus 379 ~~~-----~~aHs~dE~v~i~~l~~~~~i~~~ll~~l~~ 412 (414)
T PRK12890 379 CRG-----GISHNPEEAMDPEDLAAGARVLLDAVLRLDR 412 (414)
T ss_pred CCC-----CCCCCcCccCCHHHHHHHHHHHHHHHHHHhh
Confidence 321 3599999999999999999999999988743
No 51
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=100.00 E-value=7.7e-38 Score=324.56 Aligned_cols=344 Identities=15% Similarity=0.134 Sum_probs=256.4
Q ss_pred HHHHHHHHHhhcCCCCCc----------chHHHHHHHHHHHHhCCCc-EEeccCCceEEEEE-cCCC--CcEEEEEEccc
Q 011730 98 DWLKSVRRTIHQNPELAF----------QEFETSRLLRAELDRMEIG-YKYPLAKTGIRAWV-GTGG--PPFVALRADMD 163 (478)
Q Consensus 98 ~~l~~l~~~L~~iPs~s~----------~E~~~a~~l~~~L~~~G~~-v~~~~~~~~via~~-g~~~--~p~v~~~aHlD 163 (478)
+++++.+.++++|+|.|+ .|.+.+++|.++|+++|++ |+.+....||+|++ ++++ .|+|+|.+|||
T Consensus 3 ~~~~~~f~~~~~i~s~s~~~~~~~ps~~~~~~~a~~l~~~l~~lG~~~v~~d~~~gnv~~~~~~~~~~~~~~i~~~aHmD 82 (410)
T TIGR01882 3 EELLPRFLTYVKVNTRSDENSDTCPSTPGQLTFGNMLVDDLKSLGLQDAHYDEKNGYVIATIPSNTDKDVPTIGFLAHVD 82 (410)
T ss_pred hHHHHHHHhhEEEecccCCCCCCCCCCHhHHHHHHHHHHHHHHcCCceEEEcCCceEEEEEecCCCCCCCCEEEEEEecc
Confidence 578888889999999987 5558999999999999997 87754356899998 4343 39999999999
Q ss_pred cccCCCCC----------------------------CCCccc------c-cC-CeEEeCcchHHHHHHHHHHHHHHhcCC
Q 011730 164 ALPIQEAV----------------------------EWEYKS------K-VA-GKMHACGHDAHVAMLIGAAKILKSREH 207 (478)
Q Consensus 164 vVP~~~~~----------------------------~~Pf~~------~-~~-G~~~g~G~dg~~a~~l~aa~~L~~~~~ 207 (478)
|||..... ..||+. . .+ +.++|+++++++|++|.|++.|++.+.
T Consensus 83 Tv~~~~~~v~p~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~g~~l~G~D~KgglAa~l~A~~~L~e~~~ 162 (410)
T TIGR01882 83 TADFNGENVNPQIIENYDGESIIQLGDLEFTLDPDQFPNLSGYKGQTLITTDGTTLLGADDKAGIAEIMTAADYLINHPE 162 (410)
T ss_pred cCcCCCCCCCCEEEecCCCceeeecCCCCeEEChHhChhHHhccCceEEEcCCCEeecccCHHHHHHHHHHHHHHHhCCC
Confidence 99853221 335552 2 33 589998888999999999999987532
Q ss_pred C----C----CCCccCCCcHHHHHHcCCCCCCcEEEEEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCCC-CC
Q 011730 208 L----L----KPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANP-HR 278 (478)
Q Consensus 208 ~----l----~~dEE~g~G~~~l~~~g~~~~~D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p-~~ 278 (478)
. + .+|||.+.|++.+...+. +.|+.+..++ .|.|.+.... .|..+++|+++|+++|++.+ +.
T Consensus 163 ~~~g~I~~~ft~dEE~g~Ga~~l~~~~~--~~~~~~~i~g---ep~g~i~~~~----~g~~~~~I~v~Gk~aHa~~~~~~ 233 (410)
T TIGR01882 163 IKHGTIRVAFTPDEEIGRGAHKFDVKDF--NADFAYTVDG---GPLGELEYET----FSAAAAKITIQGNNVHPGTAKGK 233 (410)
T ss_pred CCCCCEEEEEECcccCCcCcchhhhhhc--CccEEEEeCC---CCCCeEEEcc----ccceEEEEEEEEEecCcccChHH
Confidence 1 1 299998778888765543 4566555542 3445543322 25789999999999999974 68
Q ss_pred CCCHHHHHHHHHHHHHhhhhcccCCCCCcEEEEEEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhh
Q 011730 279 SVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARV 358 (478)
Q Consensus 279 g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~v~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~ 358 (478)
++||+..+.+++..+..... + ...+-+++.+++| ..|.||++|++.+++|+++.++.+++.++|++++++.+..
T Consensus 234 g~nAi~~a~~~~~~l~~~~~----~-~~t~~~~g~i~~g-~i~giPd~a~l~~diR~~~~e~~e~i~~~i~~i~~~~~~~ 307 (410)
T TIGR01882 234 MINAAQIAIDLHNLLPEDDR----P-EYTEGREGFFHLL-SIDGTVEEAKLHYIIRDFEKENFQERKELMKRIVEKMNNE 307 (410)
T ss_pred HHHHHHHHHHHHHhcCCcCC----C-ccccceeEEEEEE-eEEEecCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988776654311 1 1111123455666 3677999999999999999999999999999999998887
Q ss_pred cCC-eeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHH-hcccceEEecccCCCCCC
Q 011730 359 FRC-SATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE-VVPAAFYYIGIKNETLGS 436 (478)
Q Consensus 359 ~g~-~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~-~iP~~~~~~G~~~~~~~~ 436 (478)
+++ .+++++..........+.+++++++.+++++++ +|.++. ...+.|++|+++|+. ++|++.+ |++.
T Consensus 308 ~g~~~v~~~~~~~~~~~~~~~~~~~~lv~~~~~a~~~-~G~~~~--~~~~~ggtDa~~~~~~Gip~~~~--G~G~----- 377 (410)
T TIGR01882 308 YGQDRIKLDMNDQYYNMAEKIEKVMEIVDIAKQAMEN-LGIEPK--ISPIRGGTDGSQLSYMGLPTPNI--FAGG----- 377 (410)
T ss_pred cCCceEEEEEEeeecChhhccCCCHHHHHHHHHHHHH-hCCCCc--ccccceechHHHHHhCCCCCCeE--cCCc-----
Confidence 774 456655421101112456788999999999987 586553 345688999999976 4898764 4442
Q ss_pred CCCCCCCCcccCcCchHHHHHHHHHHHHHHH
Q 011730 437 IHTGHSPYFMIDEDVLPVGAAVHATIAERFL 467 (478)
Q Consensus 437 ~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll 467 (478)
.++|++|||+++++|.+++++|++++..+.
T Consensus 378 -~~aHt~dE~v~i~~l~~~~~~~~~li~~~~ 407 (410)
T TIGR01882 378 -ENMHGRFEYISVDNMVKAVDVIVEIAKLNE 407 (410)
T ss_pred -ccCcCCceEEEHHHHHHHHHHHHHHHHHHh
Confidence 359999999999999999999999997764
No 52
>PRK07205 hypothetical protein; Provisional
Probab=100.00 E-value=9.8e-38 Score=327.19 Aligned_cols=350 Identities=16% Similarity=0.102 Sum_probs=244.6
Q ss_pred cchHHHHHHHHHHhhcCCCCCcch----------HHHHHHHHHHHHhCCCcEEeccCCceEEEEEcCCCCcEEEEEEccc
Q 011730 94 PETVDWLKSVRRTIHQNPELAFQE----------FETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMD 163 (478)
Q Consensus 94 ~~~~~~l~~l~~~L~~iPs~s~~E----------~~~a~~l~~~L~~~G~~v~~~~~~~~via~~g~~~~p~v~~~aHlD 163 (478)
++..+++++++++|++|||++++| .+.++++.++|+++||+++......+++++++++ +|+|+|+||+|
T Consensus 7 ~~~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~g~~-~~~lll~gH~D 85 (444)
T PRK07205 7 EKVQDACVAAIKTLVSYPSVLNEGENGTPFGQAIQDVLEATLDLCQGLGFKTYLDPKGYYGYAEIGQG-EELLAILCHLD 85 (444)
T ss_pred HHhHHHHHHHHHHHcccccccCCCcCCCCCchhHHHHHHHHHHHHHhCCCEEEEcCCCeEEEEEecCC-CcEEEEEEeec
Confidence 456789999999999999999765 5678899999999999987654344567776543 58999999999
Q ss_pred cccCCC---CCCCCcccc-cCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC--------CCccCCC-cHHHHHHcCC
Q 011730 164 ALPIQE---AVEWEYKSK-VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLK--------PAEEAGN-GAKRMMADGA 227 (478)
Q Consensus 164 vVP~~~---~~~~Pf~~~-~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~--------~dEE~g~-G~~~l~~~g~ 227 (478)
|||+++ |+.+||++. +||++||||+ | |+++++|.|+++|++.+..++ .|||.++ |++.+++...
T Consensus 86 vVp~~~~~~W~~~Pf~~~v~dg~lyGRGa~DmKgglaa~l~Al~~l~~~~~~~~~~i~l~~~~dEE~g~~g~~~~~~~~~ 165 (444)
T PRK07205 86 VVPEGDLSDWQTPPFEAVEKDGCLFGRGTQDDKGPSMAALYAVKALLDAGVQFNKRIRFIFGTDEETLWRCMNRYNEVEE 165 (444)
T ss_pred cCCCCCcccCCCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcccHHHHHhCCC
Confidence 999854 677899975 6899999998 3 889999999999988765432 9999864 7777776421
Q ss_pred CC----CCc--------------EEEEEecCCCCC--c----ceE---Eeeccc---------ccce----eeEEEEEEE
Q 011730 228 LE----DVE--------------AIFAVHVSHEHP--T----GVI---GSRPGP---------LLAG----CGFFHAVIS 267 (478)
Q Consensus 228 ~~----~~D--------------~~i~~~~~~~~~--~----g~i---~~~~g~---------~~~g----~~~~~i~v~ 267 (478)
.. ..| +.+..+++.... . +.+ ..+.|. ...| ..+.+++++
T Consensus 166 ~~~~~~~~~~~~~v~~~ekG~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~l~~~~~~~g~~~~~~~~~v~v~ 245 (444)
T PRK07205 166 QATMGFAPDSSFPLTYAEKGLLQAKLVGPGSDQLELEVGQAFNVVPAKASYQGPKLEAVKKELDKLGFEYVVKENEVTVL 245 (444)
T ss_pred CCCeeECCCCCCceEEEEeceEEEEEEeCCccceEEecCCcccccCceeEEEecCHHHHHHHHHhcCceEeecCcEEEEE
Confidence 10 122 133333321100 0 000 001111 0012 123489999
Q ss_pred eecCCCCCCCCCCCHHHHHHHHHHHHHhhh-----hcc--------------cC-CCCCcEEEEEEEeCCCccceecCcE
Q 011730 268 GKKGGAANPHRSVDPVLAASAAVISLQGLV-----SRE--------------AN-PLDSQVVSVTYFNGGDHLDMIPDAV 327 (478)
Q Consensus 268 G~~~Has~p~~g~NAi~~~~~~i~~l~~l~-----~~~--------------~~-~~~~~~~~v~~i~gG~~~NvIP~~a 327 (478)
|+++|+|.|+.|.|||..+++++.++++.. ... .. ..+..++|++. .|+||++|
T Consensus 246 G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nvg~------~nvvP~~a 319 (444)
T PRK07205 246 GKSVHAKDAPQGINAVIRLAKALVVLEPHPALDFLANVIGEDATGLNIFGDIEDEPSGKLSFNIAG------LTITKEKS 319 (444)
T ss_pred eEEcccCCCccCcCHHHHHHHHHHhccHHHHHHHHHHhcCCCCccccCCccccCCCcCCceEEeEE------EEEECCEE
Confidence 999999999999999999999998886421 000 01 12345666654 48999999
Q ss_pred EEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCC--ccCCHHHHHHHHHHHHHhcCCCcccccC
Q 011730 328 VIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPP--TVNDEDMYEHVKKVAIDLLGPMNYRVVP 405 (478)
Q Consensus 328 ~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~--~~~d~~l~~~~~~~~~~~~G~~~~~~~~ 405 (478)
++.+|+|++|+++.+++.+.|++++++ .+ +++.... .+++ ...++++++.+++++++.+|.... ..
T Consensus 320 ~~~ld~R~~p~~~~e~v~~~i~~~~~~----~~--v~~~~~~----~~~p~~~~~~~~lv~~l~~~~~~~~g~~~~--~~ 387 (444)
T PRK07205 320 EIRIDIRIPVLADKEKLVQQLSQKAQE----YG--LTYEEFD----YLAPLYVPLDSELVSTLMSVYQEKTGDDSP--AQ 387 (444)
T ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHHH----cC--cEEEEec----CCCceeeCCCcHHHHHHHHHHHHHhCCCCc--eE
Confidence 999999999999999999999998765 23 3333221 1223 346789999999999988887532 23
Q ss_pred CCCccchHHHHHHhcccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHHhh
Q 011730 406 PMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 469 (478)
Q Consensus 406 ~~~g~tD~~~~~~~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll~~ 469 (478)
.+++++|...+ .|++ .+|+..+ +....+|++||+++++++.+++++|++++.+++++
T Consensus 388 ~~gg~~~~~~~---~~~i--~~G~~~P--g~~~~aH~~nE~v~i~~l~~~~~~l~~~l~~l~~~ 444 (444)
T PRK07205 388 SSGGATFARTM---PNCV--AFGALFP--GAPQTEHQANEHIVLEDLYRAMDIYAEAIYRLTTD 444 (444)
T ss_pred EeccHHHHHhC---CCcE--EECCccC--CCCCCCcCcccCccHHHHHHHHHHHHHHHHHHhcC
Confidence 34555554432 2433 3453211 12356999999999999999999999999998763
No 53
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=100.00 E-value=7.3e-37 Score=323.10 Aligned_cols=339 Identities=15% Similarity=0.144 Sum_probs=248.9
Q ss_pred HHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEeccCCceEEEEEcC--C--CCcEEEEEEccccccCC----
Q 011730 97 VDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGT--G--GPPFVALRADMDALPIQ---- 168 (478)
Q Consensus 97 ~~~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~g~--~--~~p~v~~~aHlDvVP~~---- 168 (478)
.+++++++++|++||++|++|.++++||.++|+++|++++++. ..|+++++.+ + +.|+|+|.|||||||.+
T Consensus 3 ~~~~~~~l~~l~~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~n~~~~~~~~~g~~~~~~l~l~~HlDtV~~~~~~~ 81 (477)
T TIGR01893 3 PSRVFKYFEEISKIPRPSKNEKEVSNFIVNWAKKLGLEVKQDE-VGNVLIRKPATPGYENHPPIVLQGHMDMVCEKNEDS 81 (477)
T ss_pred HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHcCCeEEEeC-CCeEEEEEcCCCCCCCCCeEEEEeeccccCCCCCCC
Confidence 4678999999999999999999999999999999999987654 3589998832 2 25899999999999975
Q ss_pred --CCCCCCcccc-cCCeEEeCcc----h--HHHHHHHHHHHHHHhcCC---CCC----CCccCC-CcHHHHHHcCCCCCC
Q 011730 169 --EAVEWEYKSK-VAGKMHACGH----D--AHVAMLIGAAKILKSREH---LLK----PAEEAG-NGAKRMMADGALEDV 231 (478)
Q Consensus 169 --~~~~~Pf~~~-~~G~~~g~G~----d--g~~a~~l~aa~~L~~~~~---~l~----~dEE~g-~G~~~l~~~g~~~~~ 231 (478)
+|+..||.+. ++|++||||+ | ++++++|.+++. .+. .+. +|||.+ .|++.+..... ..
T Consensus 82 ~~~w~~~p~~~~~~~~~i~GrG~~lg~D~k~gva~~l~~~~~---~~~~~~~i~~~~~~dEE~g~~Gs~~l~~~~~--~~ 156 (477)
T TIGR01893 82 LHDFEKDPIELIIDGDWLKARGTTLGADNGIGVAMGLAILED---NNLKHPPLELLFTVDEETGMDGALGLDENWL--SG 156 (477)
T ss_pred CCCCCCCCeEEEEeCCEEEECCccccccccHHHHHHHHHHhc---CCCCCCCEEEEEEeccccCchhhhhcChhhc--CC
Confidence 3567799885 5799999997 6 556666665443 221 111 999976 58888876532 34
Q ss_pred cEEEEEecCCCCCcceEEe--------------ecccccceeeEEEEEEEe-ecCCCCC-CCCCC-CHHHHHHHHHHHHH
Q 011730 232 EAIFAVHVSHEHPTGVIGS--------------RPGPLLAGCGFFHAVISG-KKGGAAN-PHRSV-DPVLAASAAVISLQ 294 (478)
Q Consensus 232 D~~i~~~~~~~~~~g~i~~--------------~~g~~~~g~~~~~i~v~G-~~~Has~-p~~g~-NAi~~~~~~i~~l~ 294 (478)
++++..++... +.+.+ +.....+|..+++|+++| +++|||. |+.++ ||+..|+++|..++
T Consensus 157 ~~~~~~d~~~~---~~~~~g~~~~~~~~~~~e~~~e~~~kG~~~~~i~~~G~~~~Hsg~~p~~~r~nAi~~aa~~i~~l~ 233 (477)
T TIGR01893 157 KILINIDSEEE---GEFIVGCAGGRNVDITFPVKYEKFTKNEEGYQISLKGLKGGHSGADIHKGRANANKLMARVLNELK 233 (477)
T ss_pred cEEEEecCCCC---CeEEEECCCCeeEEEEEEEEEEecCCCceEEEEEEeCcCCCcCccccCCCCcCHHHHHHHHHHhhh
Confidence 56665553211 11100 001112577899999999 9999985 98885 99999999999988
Q ss_pred hhhhcccCCCCCcEEEEEEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhh--cC------------
Q 011730 295 GLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARV--FR------------ 360 (478)
Q Consensus 295 ~l~~~~~~~~~~~~~~v~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~--~g------------ 360 (478)
+.. .++++.+.||.+.|+||++|++.+++|....+..+.+.+.+.+.+++.+.. .+
T Consensus 234 ~~~----------~~~v~~~~gg~~~N~ip~~~~~~~diR~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (477)
T TIGR01893 234 ENL----------NFRLSDIKGGSKRNAIPREAKALIAIDENDVKLLENLVKNFQSKFKSEYSELEPNITIEVSKRENSV 303 (477)
T ss_pred hcC----------CeEEEEEeCCCcccccCCceEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEECCCcc
Confidence 752 257888999999999999999999999777777776666666655544411 01
Q ss_pred ----------------------------------------------------------------------------CeeE
Q 011730 361 ----------------------------------------------------------------------------CSAT 364 (478)
Q Consensus 361 ----------------------------------------------------------------------------~~~e 364 (478)
.+++
T Consensus 304 ~~~d~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~t~n~g~i~~~~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~~~~~ 383 (477)
T TIGR01893 304 KVFSENTTDKLINALNGLPNGVQSVSDEEPGLVESSLNLGVVKTKENKVIFTFLIRSSVESDKDYVTEKIESIAKLAGAR 383 (477)
T ss_pred cccCHHHHHHHHHHHHHCCccceeeccCCCCeEEeeeeEEEEEEcCCEEEEEEEeCCCCchhHHHHHHHHHHHhhhcCeE
Confidence 1233
Q ss_pred EEEecCCCCCCCC--ccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHhcccc-eEEecccCCCCCCCCCCC
Q 011730 365 VDFFDKGNTVYPP--TVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAA-FYYIGIKNETLGSIHTGH 441 (478)
Q Consensus 365 v~~~~~~~~~~~~--~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~iP~~-~~~~G~~~~~~~~~~~~H 441 (478)
++... .+++ +..|+++++.+.+++++.+|.++. ....+|++|++.|.+.+|.+ ...+|++. .++|
T Consensus 384 v~~~~----~~~p~~~~~d~plv~~l~~a~~~~~g~~~~--~~~~~Ggtd~~~~~~~~~~i~~v~~Gp~~------~~~H 451 (477)
T TIGR01893 384 VEVSA----GYPSWQPDPQSNLLDTARKVYSEMFGEDPE--VKVIHAGLECGIISSKIPDIDMISIGPNI------YDPH 451 (477)
T ss_pred EEEec----CCCcccCCCCCHHHHHHHHHHHHHHCCCCe--EEEeecCccHHHHHhhCCCceEEEeCCCC------CCCC
Confidence 33321 2222 346789999999999999998653 35678899998888765543 33456543 4699
Q ss_pred CCCcccCcCchHHHHHHHHHHHHHH
Q 011730 442 SPYFMIDEDVLPVGAAVHATIAERF 466 (478)
Q Consensus 442 ~~dE~i~~~~l~~~~~i~a~~~~~l 466 (478)
++||+++++++.+++++|++++.+|
T Consensus 452 ~~nE~i~i~~l~~~~~~~~~ll~~~ 476 (477)
T TIGR01893 452 SPNERVSISSVEKVWDFLVKVLERL 476 (477)
T ss_pred CCCceeeHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999998654
No 54
>PRK06156 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-36 Score=323.50 Aligned_cols=353 Identities=15% Similarity=0.133 Sum_probs=254.0
Q ss_pred cchHHHHHHHHHHhhcCCCCCc-----ch----HHHHHHHHHHHHhCCCcEEeccCCceEE-EEEcCCCCcEEEEEEccc
Q 011730 94 PETVDWLKSVRRTIHQNPELAF-----QE----FETSRLLRAELDRMEIGYKYPLAKTGIR-AWVGTGGPPFVALRADMD 163 (478)
Q Consensus 94 ~~~~~~l~~l~~~L~~iPs~s~-----~E----~~~a~~l~~~L~~~G~~v~~~~~~~~vi-a~~g~~~~p~v~~~aHlD 163 (478)
++..+++++++++|++|||++. +| .++++||.++|+++||+++.. +.+++ +.+++.+.|+|+|+||||
T Consensus 42 ~~~~~~~~~~l~~lv~i~S~~~~~~~~~e~~~~~~~~~~l~~~l~~~G~~~~~~--~~~v~~~~~~g~~~~~l~l~gH~D 119 (520)
T PRK06156 42 LKYGAAAIESLRELVAFPTVRVEGVPQHENPEFIGFKKLLKSLARDFGLDYRNV--DNRVLEIGLGGSGSDKVGILTHAD 119 (520)
T ss_pred hhhHHHHHHHHHHhcCcCcccCCCCCccCCccHHHHHHHHHHHHHHCCCeEEec--CCeEEEEEecCCCCCeEEEEEecC
Confidence 5668899999999999999874 23 356799999999999998542 22334 566533358999999999
Q ss_pred cccCC--CCCC-----CCcccc-cCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC--------CCccCC-CcHHHHH
Q 011730 164 ALPIQ--EAVE-----WEYKSK-VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLK--------PAEEAG-NGAKRMM 223 (478)
Q Consensus 164 vVP~~--~~~~-----~Pf~~~-~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~--------~dEE~g-~G~~~l~ 223 (478)
|||++ .|+. +||... ++|++||||+ | +++++++.|++.|++.+.+++ .|||.+ .|++.++
T Consensus 120 vVp~~~~~W~~~~~~~~Pf~~~~~~g~lyGRG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~~ 199 (520)
T PRK06156 120 VVPANPELWVLDGTRLDPFKVTLVGDRLYGRGTEDDKGAIVTALYAMKAIKDSGLPLARRIELLVYTTEETDGDPLKYYL 199 (520)
T ss_pred ccCCCCccCccCCccCCCCceEEECCEEEEcCcccchHHHHHHHHHHHHHHHcCCCCCceEEEEEecccccCchhHHHHH
Confidence 99985 4666 899986 5789999997 3 788888888999987664432 999986 4888888
Q ss_pred HcCCCCCCcEE---------EEEecCC------------------------CCCcceE------Eeecc-----------
Q 011730 224 ADGALEDVEAI---------FAVHVSH------------------------EHPTGVI------GSRPG----------- 253 (478)
Q Consensus 224 ~~g~~~~~D~~---------i~~~~~~------------------------~~~~g~i------~~~~g----------- 253 (478)
..+. ..++. ++.|++. +...+.+ .+...
T Consensus 200 ~~~~--~~~~~~~~D~~~~~~~~E~~~~~~~i~~~~~~~~~~~~~l~~~~gG~~~n~ip~~a~~~~~~~~~~~~~~~~~~ 277 (520)
T PRK06156 200 ERYT--PPDYNITLDAEYPVVTAEKGWGTIMATFPKRAADGKGAEIVAMTGGAFANQIPQTAVATLSGGDPAALAAALQA 277 (520)
T ss_pred HhcC--CCCeEEeeCCCCceEEEecceEEEEEEecCcCCCCCceeEEEEEcCCcCCCCCCccEEEEecCCHHHHHHHHHH
Confidence 7753 23443 3344321 0000000 00000
Q ss_pred ------cccceee---------EEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhc-------------------
Q 011730 254 ------PLLAGCG---------FFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSR------------------- 299 (478)
Q Consensus 254 ------~~~~g~~---------~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~------------------- 299 (478)
..+.|.. +++|+++|+++|+|.|+.|.|||..+++++.+|+++...
T Consensus 278 ~~~~~~~~~~g~~~~~~~~~~~~~~I~v~Gk~aHsS~P~~G~NAI~~aa~ii~~L~~~l~~~~~~~~~~~i~~~~~~~~~ 357 (520)
T PRK06156 278 AAAAQVKRHGGGFSIDFKRDGKDVTITVTGKSAHSSTPESGVNPVTRLALFLQSLDGDLPHNHAADAARYINDLVGLDYL 357 (520)
T ss_pred HHHHHHhhcccCceEEEEEcCCeEEEEEEeEECCCCCCCCCccHHHHHHHHHHhccccccchhHHHHHHHHHHhhCCCCc
Confidence 0001222 799999999999999999999999999999998752100
Q ss_pred -------ccCC-CCCcEEEEEEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCC
Q 011730 300 -------EANP-LDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKG 371 (478)
Q Consensus 300 -------~~~~-~~~~~~~v~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~ 371 (478)
...+ .+..+++++.|.+|. +.|++.+|+|++|+++.+++.++|++.+++.+..+++++++....
T Consensus 358 g~~~g~~~~~~~~g~~t~~~~~I~gg~------~~~~l~iDiR~~p~~~~eev~~~I~~~i~~~~~~~gv~ve~~~~~-- 429 (520)
T PRK06156 358 GEKFGVAYKDDFMGPLTLSPTVVGQDD------KGTEVTVNLRRPVGKTPELLKGEIADALAAWQAKHQVALDIDYYW-- 429 (520)
T ss_pred cCcCCccccCCCccCcEEeeeEEEEeC------CeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHhhcCceEEEeecC--
Confidence 0011 234567788888774 689999999999999999999999999988665556666654221
Q ss_pred CCCCCCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHhcccceEEecccCCCCCCCCCCCCCCcccCcCc
Q 011730 372 NTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDV 451 (478)
Q Consensus 372 ~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~ 451 (478)
........++++++.+++++++.+|.++. +..+.|+||++++. ++ +.+|++.+ +....+|++||++++++
T Consensus 430 -~~p~~~~~d~~lv~~l~~a~~~~~G~~~~--~~~~~ggTDa~~~~---~~--v~fGP~~~--g~~~~aHt~dE~V~ie~ 499 (520)
T PRK06156 430 -GEPMVRDPKGPWLKTLLDVFGHFTGLDAK--PVAIAGSTNAKLFP---NA--VSFGPAMP--GVKYTGHTENEFKTVEQ 499 (520)
T ss_pred -CCceeeCCCCHHHHHHHHHHHHHhCCCCc--eeeecChhhhhhCC---cc--EEEcCCCC--CCCCCCcCcccCCCHHH
Confidence 11112345779999999999998887653 35678899998873 33 23465422 11235899999999999
Q ss_pred hHHHHHHHHHHHHHHHh
Q 011730 452 LPVGAAVHATIAERFLN 468 (478)
Q Consensus 452 l~~~~~i~a~~~~~ll~ 468 (478)
+.+++++|++++.++++
T Consensus 500 l~~~~~i~~~~l~~l~~ 516 (520)
T PRK06156 500 FMLDLQMYTEMLIRIGN 516 (520)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999999976
No 55
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=100.00 E-value=8.7e-36 Score=308.48 Aligned_cols=321 Identities=17% Similarity=0.200 Sum_probs=240.6
Q ss_pred CCCcchHHHHHHHHHHHHhCCCcEEeccCCceEEEEEcC-CC-CcEEEEEEccccccCCCCCCCCcccccCCeEEeCcch
Q 011730 112 ELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGT-GG-PPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHD 189 (478)
Q Consensus 112 s~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~g~-~~-~p~v~~~aHlDvVP~~~~~~~Pf~~~~~G~~~g~G~d 189 (478)
+++++|.++++||.++|+++|++++.. ...|+++++++ ++ +|.|+|+||+||||.+ |+.+|+
T Consensus 25 ~~~~~e~~~~~~l~~~~~~~G~~~~~~-~~~nl~a~~~g~~~~~~~l~~~~H~DtV~~g------------g~~dg~--- 88 (401)
T TIGR01879 25 ALSPEDREAQDLFKKRMRAAGLEVRFD-EVGNLIGRKEGTEPPLEVVLSGSHIDTVVNG------------GNFDGQ--- 88 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEe-cCCcEEEEecCCCCCCCEEEEecccccCCCC------------CccCCH---
Confidence 346789999999999999999998764 34699999954 33 5899999999999964 344443
Q ss_pred HHHHHHHHHHHHHHhcCCCCC--------CCccCC------CcHHHHHHcC-------------C--------CC-----
Q 011730 190 AHVAMLIGAAKILKSREHLLK--------PAEEAG------NGAKRMMADG-------------A--------LE----- 229 (478)
Q Consensus 190 g~~a~~l~aa~~L~~~~~~l~--------~dEE~g------~G~~~l~~~g-------------~--------~~----- 229 (478)
.+++++|.+++.|++.+.+++ .|||.+ .|++.++... . ..
T Consensus 89 ~gvaa~l~a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~ 168 (401)
T TIGR01879 89 LGVLAGIEVVDALKEAYVVPLHPIEVVAFTEEEGSRFPYGMWGSRNMVGLANPEDVRNICDAKGISFAEAMKACGPDLPN 168 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCeEEEEEeCCcCcCcccccccHHHHhcccchhHHHhCcCCCCCCHHHHHHHcCCCccc
Confidence 256777889999998776443 999962 3777765321 0 00
Q ss_pred -------CCcEEEEEecCCCCC---cc-eEEeecccccceeeEEEEEEEeecCCCCC-CC-CCCCHHHHHHHHHHHHHhh
Q 011730 230 -------DVEAIFAVHVSHEHP---TG-VIGSRPGPLLAGCGFFHAVISGKKGGAAN-PH-RSVDPVLAASAAVISLQGL 296 (478)
Q Consensus 230 -------~~D~~i~~~~~~~~~---~g-~i~~~~g~~~~g~~~~~i~v~G~~~Has~-p~-~g~NAi~~~~~~i~~l~~l 296 (478)
+.++.+..|...+.- .| .+++..+ ++|..|++|+++|+++|++. |+ .|.||+..+++++..|+++
T Consensus 169 ~~~~~~~~~~~~~e~Hieqg~~l~~~g~~~~v~~~--~~G~~~~~i~v~G~~aHa~~~p~~~g~nAi~~aa~~i~~l~~l 246 (401)
T TIGR01879 169 QPLRPRGDIKAYVELHIEQGPVLESNGQPIGVVNA--IAGQRWYKVTLNGESNHAGTTPMSLRRDPLVAASRIIHQVEEK 246 (401)
T ss_pred ccccccccccEEEEEEEcCCcChhhCCCeEEEEEE--ecCcEEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHH
Confidence 112233333221100 01 1122222 34789999999999999996 64 5799999999999999987
Q ss_pred hhcccCCCCCcEEEEEEEeCC-CccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCC
Q 011730 297 VSREANPLDSQVVSVTYFNGG-DHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVY 375 (478)
Q Consensus 297 ~~~~~~~~~~~~~~v~~i~gG-~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~ 375 (478)
..+.. .+.+.+++.|++| .+.|+||++|++.+|+|+.|.++.+++.++|++++++.+...+++++++... .+
T Consensus 247 ~~~~~---~~~~~~vg~i~~g~~~~NvVP~~a~~~~diR~~p~~~~e~v~~~i~~~~~~~~~~~~~~~~~~~~~----~~ 319 (401)
T TIGR01879 247 AKRMG---DPTVGTVGKVEARPNGVNVIPGKVTFTLDLRHTDAAVLRDFTQQLENDIKAISDERDIGIDIERWM----DE 319 (401)
T ss_pred HHhcC---CCeEEEEEEEEecCCceEEECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCceEEEEEee----cC
Confidence 53321 2357889999985 6799999999999999999999999999999999998877778888876552 35
Q ss_pred CCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHhcccceEEecccCCCCCCCCCCCCCCcccCcCchHHH
Q 011730 376 PPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVG 455 (478)
Q Consensus 376 ~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~ 455 (478)
+++..|+++++.+++++++ +|.++. ...++++||+++|....|..+. +|++.. ..+|++||+++++++.++
T Consensus 320 ~~~~~d~~lv~~l~~a~~~-~g~~~~--~~~~~ggtDa~~~~~~~~~~v~-fgPg~~-----~~aH~~dE~v~~e~l~~~ 390 (401)
T TIGR01879 320 EPVPCSEELVAALTELCER-LGYNAR--VMVSGAGHDAQILAPIVPIGMI-FIPSIN-----GISHNPAEWSNITDCAEG 390 (401)
T ss_pred CCcCCCHHHHHHHHHHHHH-cCCCcc--ccccchHHHHHHHHhhCCEEEE-EecCCC-----CCcCCCCccCCHHHHHHH
Confidence 5677899999999999987 476543 3467899999999876555443 455432 358999999999999999
Q ss_pred HHHHHHHHHHH
Q 011730 456 AAVHATIAERF 466 (478)
Q Consensus 456 ~~i~a~~~~~l 466 (478)
+++|++++.++
T Consensus 391 ~~vl~~~i~~l 401 (401)
T TIGR01879 391 AKVLYLMVYQL 401 (401)
T ss_pred HHHHHHHHHhC
Confidence 99999998764
No 56
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=100.00 E-value=2.1e-35 Score=305.56 Aligned_cols=337 Identities=13% Similarity=0.150 Sum_probs=253.9
Q ss_pred HHHHHHHHHhhcC---C-------CCCcchHHHHHHHHHHHHhCCCcEEeccCCceEEEEEc-CC-CCcEEEEEEccccc
Q 011730 98 DWLKSVRRTIHQN---P-------ELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVG-TG-GPPFVALRADMDAL 165 (478)
Q Consensus 98 ~~l~~l~~~L~~i---P-------s~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~g-~~-~~p~v~~~aHlDvV 165 (478)
+++++.+..|-+| | ..|..+.++.+|+.++|+++|++++.+.. .|+++++. .. +.|.|++.+|||||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~g~~R~~~s~~~~~a~~~~~~~~~~~Gl~v~~D~~-gN~~~~~~g~~~~~~~i~~gsHlDtv 81 (406)
T TIGR03176 3 KHFRQAIEELSSFGADPAGGMTRLLYSPEWLAAQQQFKKRMAESGLETRFDDV-GNLYGRLVGTEFPEETILTGSHIDTV 81 (406)
T ss_pred HHHHHHHHHHhccCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCEEEEcCC-CcEEEEecCCCCCCCeEEEeccccCC
Confidence 4566666666665 2 12456788999999999999999887655 58999994 43 35999999999999
Q ss_pred cCCCCCCCCcccccCCeEEeCcchHHHHHHHHHHHHHHhcCCCCC--------CCccCC------CcHHHHHH-------
Q 011730 166 PIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLK--------PAEEAG------NGAKRMMA------- 224 (478)
Q Consensus 166 P~~~~~~~Pf~~~~~G~~~g~G~dg~~a~~l~aa~~L~~~~~~l~--------~dEE~g------~G~~~l~~------- 224 (478)
|.+ |+.- |. .++++.|.+++.|++.+.+++ .+||++ -|++.+..
T Consensus 82 ~~g------------G~~d--g~-~Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~g~~~~~~~ 146 (406)
T TIGR03176 82 VNG------------GNLD--GQ-FGALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFPYVFWGSKNIFGLAKPEDV 146 (406)
T ss_pred CCC------------CccC--ch-hhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCCcccccHHHHhCCCCHHHH
Confidence 964 2211 11 456667789999998865543 889874 26665542
Q ss_pred -----------------cCC--------CCCCcEEEEEecC--CCCC-cc-eEEeecccccceeeEEEEEEEeecCCCCC
Q 011730 225 -----------------DGA--------LEDVEAIFAVHVS--HEHP-TG-VIGSRPGPLLAGCGFFHAVISGKKGGAAN 275 (478)
Q Consensus 225 -----------------~g~--------~~~~D~~i~~~~~--~~~~-~g-~i~~~~g~~~~g~~~~~i~v~G~~~Has~ 275 (478)
.|+ ..++++.+.+|.. +.+. .| .+++..+ .+|..+++|+++|+++|+|.
T Consensus 147 ~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~elHieqG~~Le~~g~~igiv~~--~~G~~~~~v~v~GkaaHag~ 224 (406)
T TIGR03176 147 RTIEDAKGIKFVDAMHACGFDLRKAPTVRDDIKAFVELHIEQGCVLESEGQSIGVVNA--IVGQRRYTVNLKGEANHAGT 224 (406)
T ss_pred HhCcCCCCCCHHHHHHHcCCCcccccccccccceEEEEEECCCcchHHCCCeEEEEee--cccceEEEEEEEEECCCCCC
Confidence 111 0135677778863 2222 11 2333333 34788999999999999997
Q ss_pred CCC--CCCHHHHHHHHHHHHHhhhhcccCCCCCcEEEEEEEe-CCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHH
Q 011730 276 PHR--SVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFN-GGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVI 352 (478)
Q Consensus 276 p~~--g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~v~~i~-gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~ 352 (478)
|.. +.||+..+++++..++++..+. ....++++|.|+ +|.+.|+||++|++.+|+|+++.++.+.+.+++++.+
T Consensus 225 ~p~~~r~dAi~aaa~~i~~l~~~~~~~---~~~~~~tvG~I~~gg~~~NvIP~~a~~~~DiR~~~~~~~e~v~~~i~~~i 301 (406)
T TIGR03176 225 TPMSYRRDTVYAFSRICTQSIERAKEI---GDPLVLTFGKVEPVPNTVNVVPGETTFTIDCRHTDAAVLRNFTKELENDM 301 (406)
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHhc---CCCcEEEEEEEEEcCCceEEECCeEEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence 543 4899999999999998864322 234689999999 5789999999999999999999999999999999999
Q ss_pred HHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHhcccceEEecccCC
Q 011730 353 VEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNE 432 (478)
Q Consensus 353 ~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~iP~~~~~~G~~~~ 432 (478)
++.+..++++++++... . .++...|+++++.+++++++. +... ....+++++|+++|.+.+|++++|++...
T Consensus 302 ~~ia~~~g~~~ei~~~~---~-~~p~~~d~~lv~~l~~a~~~~-~~~~--~~~~sggg~Da~~~~~~vP~~~ifgp~~~- 373 (406)
T TIGR03176 302 KAIADEMDITIDIDLWM---D-EAPVPMNKEIVAIIEQLAKAE-KLNY--RLMHSGAGHDAQIFAPRVPTAMIFVPSIG- 373 (406)
T ss_pred HHHHHHcCCeEEEEEEe---c-CCCCCCCHHHHHHHHHHHHHc-CCCc--eecCcccHHHHHHHHHHCCEEEEEEeCCC-
Confidence 99988888888876532 2 233456789999999999985 4332 23567889999999988999876655432
Q ss_pred CCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHHh
Q 011730 433 TLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 468 (478)
Q Consensus 433 ~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll~ 468 (478)
..+|+|+|++++++|..++++|+.++.+|++
T Consensus 374 -----g~~H~p~E~v~~e~l~~g~~vl~~~l~~l~~ 404 (406)
T TIGR03176 374 -----GISHNPAERTNIEDLVEGVKTLADMLYELAY 404 (406)
T ss_pred -----CCCCCccccCCHHHHHHHHHHHHHHHHHHhc
Confidence 2589999999999999999999999999875
No 57
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=100.00 E-value=2.6e-35 Score=317.07 Aligned_cols=340 Identities=14% Similarity=0.143 Sum_probs=265.1
Q ss_pred cchHHHHHHHHHHhhcCCCC-------------CcchHHHHHHHHHHHHhCCCc-EEeccCCceEEEEEc-CC-CCcEEE
Q 011730 94 PETVDWLKSVRRTIHQNPEL-------------AFQEFETSRLLRAELDRMEIG-YKYPLAKTGIRAWVG-TG-GPPFVA 157 (478)
Q Consensus 94 ~~~~~~l~~l~~~L~~iPs~-------------s~~E~~~a~~l~~~L~~~G~~-v~~~~~~~~via~~g-~~-~~p~v~ 157 (478)
+.+.++|++.+..|-+|+.+ |..+.++++|+.+||+++|++ |+.+.. .|+++++. .. +.|.|+
T Consensus 177 ~~~~~r~~~~l~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~~~~~~~~~Gl~~v~~D~~-gNv~~~~~g~~~~~p~v~ 255 (591)
T PRK13799 177 PAIGADVMDWAEDIAAHSDPGYADEGALTCTYLSDAHRACANQISDWMRDAGFDEVEIDAV-GNVVGRYKAADDDAKTLI 255 (591)
T ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCCeEeECCC-CCEEEEcCCCCCCCCeEE
Confidence 45677888899999998631 234568999999999999998 987654 58999984 33 369999
Q ss_pred EEEccccccCCCCCCCCcccccCCeEEeCcchHHHHHHHHHHHHHHhcCCCCC--------CCccCC------CcHHHHH
Q 011730 158 LRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLK--------PAEEAG------NGAKRMM 223 (478)
Q Consensus 158 ~~aHlDvVP~~~~~~~Pf~~~~~G~~~g~G~dg~~a~~l~aa~~L~~~~~~l~--------~dEE~g------~G~~~l~ 223 (478)
+.+|+||||.+ |+.+|+ .++++.|.+++.|++.+.+++ .+||+. .|++.+.
T Consensus 256 ~gSHlDTV~~g------------G~~DG~---~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~EEg~rF~~~~~GS~~~~ 320 (591)
T PRK13799 256 TGSHYDTVRNG------------GKYDGR---EGIFLAIACVKELHEQGERLPFHFEVIAFAEEEGQRFKATFLGSGALI 320 (591)
T ss_pred EeccccccCCC------------CccccH---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCccCCCccccchHHHh
Confidence 99999999953 676666 477778899999999876543 899972 2555554
Q ss_pred --------H----cCC----------C------------CCCcEEEEEecCCC-------CCcceEEeecccccceeeEE
Q 011730 224 --------A----DGA----------L------------EDVEAIFAVHVSHE-------HPTGVIGSRPGPLLAGCGFF 262 (478)
Q Consensus 224 --------~----~g~----------~------------~~~D~~i~~~~~~~-------~~~g~i~~~~g~~~~g~~~~ 262 (478)
+ +|. + .++++.+.+|...+ .+. ++..+ .+|..++
T Consensus 321 G~~~~~~~~~~d~~G~~~~~~l~~~g~~~~~~~~~~~~~~~~~a~~ElHIEQgp~Le~~~~~i---gvV~g--~~G~~~~ 395 (591)
T PRK13799 321 GDFNMELLDIKDADGISLREAIQHAGHCIDAIPKIARDPADVLGFIEVHIEQGPVLLELDIPL---GIVTS--IAGSARY 395 (591)
T ss_pred CCChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCCcE---EEEee--eccceEE
Confidence 1 122 0 13456777775543 232 33333 3478899
Q ss_pred EEEEEeecCCCCC-CC-CCCCHHHHHHHHHHHHHhhhhcccCCCCCcEEEEEEEeCC-CccceecCcEEEEEEEeccChH
Q 011730 263 HAVISGKKGGAAN-PH-RSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGG-DHLDMIPDAVVIGGTLRAFSNT 339 (478)
Q Consensus 263 ~i~v~G~~~Has~-p~-~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~v~~i~gG-~~~NvIP~~a~~~~diR~~p~~ 339 (478)
+|+++|+++|+|. |. .+.||+..+++++..++++..+. +....+++||.|+++ .+.|+||++|++.+|+|+.+.+
T Consensus 396 ~Itv~GkaaHag~~Pm~~r~dAi~aaa~ii~~l~~~~~~~--~~~~~v~tVG~I~~~~ga~NvIP~~a~~~~DiR~~~~e 473 (591)
T PRK13799 396 ICEFIGMASHAGTTPMDMRKDAAAAAAEIALYIEKRAAQD--QHASLVATMGQLNVPSGSTNVIPGRCQFSLDIRAATDE 473 (591)
T ss_pred EEEEEEECCCCCCCChhhchhHHHHHHHHHHHHHHHHHhc--CCCCcEEEEEEEEecCCCCceECCEEEEEEEeeCCCHH
Confidence 9999999999996 64 58899999999999999875432 223357889999853 4899999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHh
Q 011730 340 SFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV 419 (478)
Q Consensus 340 ~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~ 419 (478)
+.+.+.+++++.+++.+..+++.+++++.. .++++.+|+++++.+.+++++ +|.+.. ...+++++|+++|...
T Consensus 474 ~~e~l~~~i~~~i~~ia~~~g~~~ei~~~~----~~~~~~~d~~lv~~~~~a~~~-~G~~~~--~~~sgag~Da~~~a~~ 546 (591)
T PRK13799 474 IRDAAVADILAEIAAIAARRGIEYKAELAM----KAAAAPCAPELMKQLEAATDA-AGVPLF--ELASGAGHDAMKIAEI 546 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeEEEEEEe----cCCCcCCCHHHHHHHHHHHHH-cCCCce--ecCcchHHHHHHHHhh
Confidence 999999999999999988888888877653 345677899999999998876 687642 3567899999999988
Q ss_pred cccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHHh
Q 011730 420 VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLN 468 (478)
Q Consensus 420 iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll~ 468 (478)
.|+.++|+++++. ..+|+|+|++++++|..++++|.+++.++.+
T Consensus 547 ~p~amif~~~g~~-----g~sHsp~E~v~~edL~~g~~vl~~~l~~l~~ 590 (591)
T PRK13799 547 MDQAMLFTRCGNA-----GISHNPLESMTADDMELSADAFLDFLNNFAE 590 (591)
T ss_pred CCEEEEEEecCCC-----CCCCCccccCCHHHHHHHHHHHHHHHHHHhh
Confidence 8887777766542 2489999999999999999999999988764
No 58
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=100.00 E-value=4.2e-35 Score=308.22 Aligned_cols=337 Identities=16% Similarity=0.166 Sum_probs=241.8
Q ss_pred HHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEeccCCceEEEEEc-C-C--CCcEEEEEEccccccCCC---
Q 011730 97 VDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVG-T-G--GPPFVALRADMDALPIQE--- 169 (478)
Q Consensus 97 ~~~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~g-~-~--~~p~v~~~aHlDvVP~~~--- 169 (478)
.+++++++++|++||++|++|.++++||.++|+++|++++.+. ..|+++.+. . + ..|.|+|.|||||||+++
T Consensus 9 ~~~~~~~l~~Lv~ips~S~~e~~~~~~l~~~~~~~G~~~~~d~-~gnvi~~~~~~~g~~~~~~v~l~gH~DtV~~~~~~~ 87 (485)
T PRK15026 9 PQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERDQ-VGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDT 87 (485)
T ss_pred HHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhCCCEEEEEe-cCeEEEEEcCCCCCCCCCEEEEEeeecccCCCCCCc
Confidence 5678999999999999999999999999999999999987653 357887763 2 2 358999999999999754
Q ss_pred ---CCCCCcccc-cCCeEEeCcc----h--HHHHHHHHHHHHHHhcCC---CC----CCCccCC-CcHHHHHHcCCCCCC
Q 011730 170 ---AVEWEYKSK-VAGKMHACGH----D--AHVAMLIGAAKILKSREH---LL----KPAEEAG-NGAKRMMADGALEDV 231 (478)
Q Consensus 170 ---~~~~Pf~~~-~~G~~~g~G~----d--g~~a~~l~aa~~L~~~~~---~l----~~dEE~g-~G~~~l~~~g~~~~~ 231 (478)
|+.+||+.. ++|++||+|. | ++++++|.+ |++.+. .+ .+|||.| .|++.+.. +. ..+
T Consensus 88 ~~~w~~~P~~~~i~~~~l~g~Gt~lgaD~k~gva~~l~~---l~~~~~~~~~i~~l~t~dEE~G~~ga~~l~~-~~-~~~ 162 (485)
T PRK15026 88 VHDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAV---LADENVVHGPLEVLLTMTEEAGMDGAFGLQS-NW-LQA 162 (485)
T ss_pred cccCCCCCceEEEcCCEEEeCCccccCccHHHHHHHHHH---HHhCCCCCCCEEEEEEcccccCcHhHHHhhh-cc-CCc
Confidence 457799875 5689999997 3 344544443 343322 12 2999987 48888865 33 368
Q ss_pred cEEEEEecCCCCCcceEE-eecccc-------------cceeeEEEEEEEe-ecCCCC-CCCCCC-CHHHHHHHHHHHHH
Q 011730 232 EAIFAVHVSHEHPTGVIG-SRPGPL-------------LAGCGFFHAVISG-KKGGAA-NPHRSV-DPVLAASAAVISLQ 294 (478)
Q Consensus 232 D~~i~~~~~~~~~~g~i~-~~~g~~-------------~~g~~~~~i~v~G-~~~Has-~p~~g~-NAi~~~~~~i~~l~ 294 (478)
|++|++||+.. |.+. .+.|.. .+|..+++|+++| +++||+ .|+.|+ |||..|+++|.++.
T Consensus 163 ~~~i~~e~~~~---g~l~~g~~G~~~~~~~~~~~r~~~~~g~~~~~i~v~Gl~ggHsG~~i~~g~~nAi~~la~~l~~~~ 239 (485)
T PRK15026 163 DILINTDSEEE---GEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHA 239 (485)
T ss_pred CEEEEeCCCCC---CeEEEeCCCcceEEEEEEEEEEecCCCceEEEEEEECCCCcCChHHHCCCCccHHHHHHHHHHHhH
Confidence 99999997632 3221 111110 1356789999999 999999 599999 99999999999854
Q ss_pred hhhhcccCCCCCcEEEEEEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHH--------------------
Q 011730 295 GLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVE-------------------- 354 (478)
Q Consensus 295 ~l~~~~~~~~~~~~~~v~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~-------------------- 354 (478)
. ..+++++.|+||++.|+||++|++.+++|....+..+.+.+.+.+.+++
T Consensus 240 ~----------~~~~~v~~i~GG~~~NaIp~~a~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (485)
T PRK15026 240 E----------ELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDALKSLVNTYQEILKNELAEKEKNLALLLDSVANDK 309 (485)
T ss_pred h----------hCCeEEEEEeCCCccCCCCCCcEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEEccccc
Confidence 2 1467899999999999999888888888866544444444433332221
Q ss_pred ------------------------------------------------------------------------HHhhcCCe
Q 011730 355 ------------------------------------------------------------------------QARVFRCS 362 (478)
Q Consensus 355 ------------------------------------------------------------------------~~~~~g~~ 362 (478)
.++.+|.
T Consensus 310 ~~~~~~~~~~~~~~l~~~~~Gv~~~s~~~~g~v~~S~Nlg~v~~~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~~g~- 388 (485)
T PRK15026 310 AALIAKSRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGA- 388 (485)
T ss_pred cccCHHHHHHHHHHHHHCCcccEEeccCCCCeEEeeeEEEEEEEeCCEEEEEEEecCCCchHHHHHHHHHHHHHHHcCc-
Confidence 0111121
Q ss_pred eEEEEecCCCCCCCCcc--CCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHhcccc-eEEecccCCCCCCCCC
Q 011730 363 ATVDFFDKGNTVYPPTV--NDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAA-FYYIGIKNETLGSIHT 439 (478)
Q Consensus 363 ~ev~~~~~~~~~~~~~~--~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~iP~~-~~~~G~~~~~~~~~~~ 439 (478)
+++.. ..||+.. .|+++++.+.+++++++|.++. +....+++|.+.|.+..|.+ ++-+||.. ..
T Consensus 389 -~~~~~----~~~p~w~~~~ds~lv~~l~~~y~e~~G~~~~--~~~ihaglEcG~~~~~~p~i~~VsfGP~~------~~ 455 (485)
T PRK15026 389 -KTEAK----GAYPGWQPDANSPVMHLVRETYQRLFNKTPN--IQIIHAGLECGLFKKPYPEMDMVSIGPTI------TG 455 (485)
T ss_pred -EEEEe----CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCe--EEEEEEEehHHHHHhhCCCCCEEEECCCC------CC
Confidence 12221 2355443 4679999999999999998753 35677999999999765542 23356653 35
Q ss_pred CCCCCcccCcCchHHHHHHHHHHHHHH
Q 011730 440 GHSPYFMIDEDVLPVGAAVHATIAERF 466 (478)
Q Consensus 440 ~H~~dE~i~~~~l~~~~~i~a~~~~~l 466 (478)
+|+|||+++++++.+..+++..++.++
T Consensus 456 ~HspdE~v~I~s~~~~~~~l~~~l~~~ 482 (485)
T PRK15026 456 PHSPDEQVHIESVGHYWTLLTELLKEI 482 (485)
T ss_pred CCCCCcEEEhHHHHHHHHHHHHHHHhh
Confidence 899999999999987777777777665
No 59
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=100.00 E-value=1.8e-34 Score=310.78 Aligned_cols=341 Identities=11% Similarity=0.097 Sum_probs=258.8
Q ss_pred chHHHHHHHHHHhhcCCCC-------------CcchHHHHHHHHHHHHhCCC-cEEeccCCceEEEEEc-CCC-CcEEEE
Q 011730 95 ETVDWLKSVRRTIHQNPEL-------------AFQEFETSRLLRAELDRMEI-GYKYPLAKTGIRAWVG-TGG-PPFVAL 158 (478)
Q Consensus 95 ~~~~~l~~l~~~L~~iPs~-------------s~~E~~~a~~l~~~L~~~G~-~v~~~~~~~~via~~g-~~~-~p~v~~ 158 (478)
...++|++.+..|-+|+.+ |..+.++++||.++|+++|+ +|+.+.. .|+++++. .++ .|.|++
T Consensus 178 ~~~~r~~~~~~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~l~~~~~~~Gl~~v~~D~~-GNl~~~~~g~~~~~~~v~~ 256 (591)
T PRK13590 178 VLGNDVWDWAERLAAHSDPGYAEKGQLTVTYLTDAHRACAQQISHWMRDCGFDEVHIDAV-GNVVGRYKGSTPQAKRLLT 256 (591)
T ss_pred hHHHHHHHHHHHHhcccCCCCCCCCceeeeeCCHHHHHHHHHHHHHHHHcCCCeeeECCC-CCEEEEecCCCCCCCeEEE
Confidence 4567788888888888653 33456899999999999999 8877544 58999984 343 489999
Q ss_pred EEccccccCCCCCCCCcccccCCeEEeCcchHHHHHHHHHHHHHHhcCCCCC--------CCccCC------CcHHH---
Q 011730 159 RADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLK--------PAEEAG------NGAKR--- 221 (478)
Q Consensus 159 ~aHlDvVP~~~~~~~Pf~~~~~G~~~g~G~dg~~a~~l~aa~~L~~~~~~l~--------~dEE~g------~G~~~--- 221 (478)
.+||||||.+ |+.+|. ++++++|.+++.|++.+..++ .+||++ .|++.
T Consensus 257 gsHlDTV~~g------------G~~DG~---~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~EEg~rF~~~~~GS~~~~G 321 (591)
T PRK13590 257 GSHYDTVRNG------------GKYDGR---LGIFVPMACVRELHRQGRRLPFGLEVVGFAEEEGQRYKATFLGSGALIG 321 (591)
T ss_pred ecccccCCCC------------CCcccH---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCccccCCccccchHHHhC
Confidence 9999999954 554444 577888899999998875432 999973 25553
Q ss_pred -----HHH---------------cCC----C-------CCCcEEEEEecCCCCC---cc-eEEeecccccceeeEEEEEE
Q 011730 222 -----MMA---------------DGA----L-------EDVEAIFAVHVSHEHP---TG-VIGSRPGPLLAGCGFFHAVI 266 (478)
Q Consensus 222 -----l~~---------------~g~----~-------~~~D~~i~~~~~~~~~---~g-~i~~~~g~~~~g~~~~~i~v 266 (478)
+++ .|+ + +.+++.+..|...+.. .| .+++..+ .+|..+++|++
T Consensus 322 ~~~~~~~~~~d~~g~~~~~al~~~g~~~~~~~~~~~~~~~~~a~~ElHiEqg~~Le~~~~~~gvV~~--~~G~~~~~v~v 399 (591)
T PRK13590 322 DFDPAWLDQKDADGITMREAMQHAGLCIDDIPKLRRDPARYLGFVEVHIEQGPVLNELDLPLGIVTS--INGSVRYVGEM 399 (591)
T ss_pred CChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCCceEEEee--eeccEEEEEEE
Confidence 222 111 0 1345667777553310 01 1222222 24788999999
Q ss_pred EeecCCCCC-CCC-CCCHHHHHHHHHHHHHhhhhcccCCCCCcEEEEEEEeC-CCccceecCcEEEEEEEeccChHhHHH
Q 011730 267 SGKKGGAAN-PHR-SVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNG-GDHLDMIPDAVVIGGTLRAFSNTSFYQ 343 (478)
Q Consensus 267 ~G~~~Has~-p~~-g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~v~~i~g-G~~~NvIP~~a~~~~diR~~p~~~~~~ 343 (478)
+|+++|+|. |.. +.||+..+++++..++++... ....+.+||.+.+ |.+.|+||++|++.+|+|+.+.++.+.
T Consensus 400 ~GkaaHag~~P~~~r~dAi~aaa~~i~~l~~~~~~----~~~~v~tVG~i~~~Gg~~NVIP~~a~~~iDiR~~~~e~~e~ 475 (591)
T PRK13590 400 IGMASHAGTTPMDRRRDAAAAVAELALYVEQRAAQ----DGDSVGTVGMLEVPGGSINVVPGRCRFSLDIRAPTDAQRDA 475 (591)
T ss_pred EeECCCCCCCCchhcccHHHHHHHHHHHHHHHHhc----CCCcEEEEEEEEECCCCCceECCEEEEEEEeeCCCHHHHHH
Confidence 999999996 655 689999999999999886422 1234779999873 568999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHhcccc
Q 011730 344 LLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEVVPAA 423 (478)
Q Consensus 344 i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~iP~~ 423 (478)
+.+++++.+++.+..++++++++... .++++.+|+++++.+.+++++ +|.+.. ..++++++|+++|+..+|++
T Consensus 476 v~~~i~~~i~~ia~~~g~~vei~~~~----~~~~~~~d~~lv~~~~~aa~~-~G~~~~--~~~sggg~Da~~~a~~~p~~ 548 (591)
T PRK13590 476 MVADVLAELEAICERRGLRYTLEETM----RAAAAPSAPAWQQRWEAAVAA-LGLPLF--RMPSGAGHDAMKLHEIMPQA 548 (591)
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEEee----cCCCcCCCHHHHHHHHHHHHH-cCCCcc--cCCcchhHHHHHHHHHCCEE
Confidence 99999999999988889888887653 355677899999999999987 687643 35678999999999888876
Q ss_pred eEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHHhh
Q 011730 424 FYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 469 (478)
Q Consensus 424 ~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll~~ 469 (478)
++| |++.. ...+|+++|++++++|.+++++|.+++.+++..
T Consensus 549 mif-gpg~~----~g~sH~p~E~v~~edL~~g~~vl~~ll~~l~~~ 589 (591)
T PRK13590 549 MLF-VRGEN----AGISHNPLESSTADDMQLAVQAFQHLLDQLAAE 589 (591)
T ss_pred EEE-EeeCC----CCCCCCCccCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 654 34321 135899999999999999999999999988754
No 60
>PRK08554 peptidase; Reviewed
Probab=100.00 E-value=6.2e-35 Score=304.51 Aligned_cols=350 Identities=20% Similarity=0.144 Sum_probs=246.9
Q ss_pred HHHHHHHHhhcCCCCCcc------hHHHHHHHHHHHHhCCCcEEecc--CCceEEEEEcCCCCcEEEEEEccccccCC--
Q 011730 99 WLKSVRRTIHQNPELAFQ------EFETSRLLRAELDRMEIGYKYPL--AKTGIRAWVGTGGPPFVALRADMDALPIQ-- 168 (478)
Q Consensus 99 ~l~~l~~~L~~iPs~s~~------E~~~a~~l~~~L~~~G~~v~~~~--~~~~via~~g~~~~p~v~~~aHlDvVP~~-- 168 (478)
++++++++|++|||+++. |.++++|+.++|+++||+++... +++++++.++.+ .|+|+|+|||||||++
T Consensus 2 ~~~~~l~~LV~i~S~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~l~~~~~~~-~~~l~l~gH~DtVp~~~~ 80 (438)
T PRK08554 2 DVLELLSSLVSFETVNDPSKGIKPSKECPKFIKDTLESWGIESELIEKDGYYAVYGEIGEG-KPKLLFMAHFDVVPVNPE 80 (438)
T ss_pred hHHHHHHHHhCCCCCCCcccCcchHHHHHHHHHHHHHHCCCeEEEEecCCceEEEEEeCCC-CCEEEEEeccccCCCCcc
Confidence 468889999999998753 57899999999999999976432 346899988543 5789999999999986
Q ss_pred CCCCCCcccc-cCCeEEeCcc---hHHHHHHHHHHHHHHhcCCC--CC----CCccCCC-cHHHHHHcC--CCCCCcEEE
Q 011730 169 EAVEWEYKSK-VAGKMHACGH---DAHVAMLIGAAKILKSREHL--LK----PAEEAGN-GAKRMMADG--ALEDVEAIF 235 (478)
Q Consensus 169 ~~~~~Pf~~~-~~G~~~g~G~---dg~~a~~l~aa~~L~~~~~~--l~----~dEE~g~-G~~~l~~~g--~~~~~D~~i 235 (478)
.|..+||++. ++|++||||. ++++++++.|++.|++.... +. +|||.++ +...+++.. ....+|++|
T Consensus 81 ~w~~~Pf~~~~~~g~lyGrG~~DmKgg~aa~l~A~~~l~~~~~~~~i~l~~~~dEE~g~~~~~~~~~~~~~~~~~~~~~i 160 (438)
T PRK08554 81 EWNTEPFKLTVKGDKAYGRGSADDKGNVASVMLALKELSKEPLNGKVIFAFTGDEEIGGAMAMHIAEKLREEGKLPKYMI 160 (438)
T ss_pred ccccCCceeEEECCEEEECCcccchHHHHHHHHHHHHHHhcCCCCCEEEEEEcccccCccccHHHHHHHHhcCCCCCEEE
Confidence 3688999985 5789999996 38889888999998764322 21 9999764 344554431 112579999
Q ss_pred EEecCCCCCcceEEeecccc-----------ccee---eEEEEEEEeec-CCCCCCCCCCC--HHHHHHHHHHHHHhhhh
Q 011730 236 AVHVSHEHPTGVIGSRPGPL-----------LAGC---GFFHAVISGKK-GGAANPHRSVD--PVLAASAAVISLQGLVS 298 (478)
Q Consensus 236 ~~~~~~~~~~g~i~~~~g~~-----------~~g~---~~~~i~v~G~~-~Has~p~~g~N--Ai~~~~~~i~~l~~l~~ 298 (478)
+.||+...+ .+..+.|.. ..|. .++.+++.|.+ +|++.+..|.| |+..+++++.++..+..
T Consensus 161 v~Ept~~~~--~~~~~kg~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Ha~~~~~g~~~~~i~~~~~~~~~~~~~~~ 238 (438)
T PRK08554 161 NADGIGMKP--IIRRRKGFGVTIRVPSEKVKVKGKLREQTFEIRTPVVETRHAAYFLPGVDTHPLIAASHFLRESNVLAV 238 (438)
T ss_pred EeCCCCCcc--hhhcCCceEEEEEecccccccccceeeeeeceeecccCccccccccCCcCchHHHHHHHHHhhcCceEE
Confidence 999875432 111111100 0121 35566666765 99998766665 58788877776654311
Q ss_pred cccC-------CCCCcEEEEEEEeCCC-----------------------------------cccee---cCcEEEEEEE
Q 011730 299 REAN-------PLDSQVVSVTYFNGGD-----------------------------------HLDMI---PDAVVIGGTL 333 (478)
Q Consensus 299 ~~~~-------~~~~~~~~v~~i~gG~-----------------------------------~~NvI---P~~a~~~~di 333 (478)
.... +....++++....+|. ..|++ |++|++.+|+
T Consensus 239 ~~~g~~~~~~~~~~~~~~~~~~p~~g~n~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~n~~~i~~g~a~~~~Di 318 (438)
T PRK08554 239 SLEGKFLKGNVVPGEVTLTYLEPGEGEEVEVDLGLTRLLKAIVPLVRAPIKAEKYSDYGVSITPNVYSFAEGKHVLKLDI 318 (438)
T ss_pred EEeeeeeecCcccceeEEEEecCCCCccccccccHHHHHHHHHHHHHHhhccccccccceeeccceEEecCCeEEEEEEE
Confidence 0000 1112223332223343 56777 9999999999
Q ss_pred eccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchH
Q 011730 334 RAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDF 413 (478)
Q Consensus 334 R~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~ 413 (478)
|+.| .+.+++.++++++++... .+++++++.... .....+..++++++.+++++++ +|.++. +...+|+||+
T Consensus 319 R~~~-~~~e~v~~~i~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~lv~~~~~~~~~-~g~~~~--~~~~~GgtDa 390 (438)
T PRK08554 319 RAMS-YSKEDIERTLKEVLEFNL--PEAEVEIRTNEK--AGYLFTPPDEEIVKVALRVLKE-LGEDAE--PVEGPGASDS 390 (438)
T ss_pred EecC-CCHHHHHHHHHHHhhccC--CCceEEEEeccC--CCCcCCCCChHHHHHHHHHHHH-hCCCcE--EEecCCchHH
Confidence 9988 588999999999887532 345666654321 2233445689999999999988 687642 4567899999
Q ss_pred HHHHH-hcccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHHH
Q 011730 414 SFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFL 467 (478)
Q Consensus 414 ~~~~~-~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~ll 467 (478)
++++. .+|++. +|++. .++|++|||+++++|.+++++|.+++.+|+
T Consensus 391 ~~~~~~Gip~v~--~Gp~~------~~~H~~~E~v~i~~l~~~~~i~~~~i~~l~ 437 (438)
T PRK08554 391 RYFTPYGVKAID--FGPKG------GNIHGPNEYVEIDSLKKMPEVYKRIALRLL 437 (438)
T ss_pred HHHHhcCCCceE--ECCCC------CCCCCCcceEEHHHHHHHHHHHHHHHHHHh
Confidence 99975 599976 35542 359999999999999999999999998886
No 61
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=100.00 E-value=1e-34 Score=303.45 Aligned_cols=341 Identities=15% Similarity=0.072 Sum_probs=234.2
Q ss_pred HHHHHHHHHhhcCCCCCcc------------hHHHHHHHHHHHHhCCCcEEeccCCceEEEEEcCCCCcEEEEEEccccc
Q 011730 98 DWLKSVRRTIHQNPELAFQ------------EFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDAL 165 (478)
Q Consensus 98 ~~l~~l~~~L~~iPs~s~~------------E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~g~~~~p~v~~~aHlDvV 165 (478)
+++++++++|++|||++.+ +.++++|+.++|+++||+++...+ ...++.++.+ .|+|+|+||||||
T Consensus 2 ~~~i~ll~~Lv~ipS~s~~~~p~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~-~~~~~~~~~~-~~~l~l~gH~D~V 79 (447)
T TIGR01887 2 DEILEDLKELIRIDSVEDLEEAKEGAPFGEGPKKALDKFLELAKRDGFTTENVDN-YAGYAEYGQG-EEYLGILGHLDVV 79 (447)
T ss_pred hHHHHHHHHhcCcCcCCCCCCCCCCCCcchhHHHHHHHHHHHHHHcCceEEEecC-ceEEEEeCCC-CCeEEEEeecCCC
Confidence 4688999999999999832 368999999999999999875321 1123334333 5799999999999
Q ss_pred cCC-CCCCCCcccc-cCCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC--------CCccCCC-cHHHHHHcCCCC--
Q 011730 166 PIQ-EAVEWEYKSK-VAGKMHACGH-D--AHVAMLIGAAKILKSREHLLK--------PAEEAGN-GAKRMMADGALE-- 229 (478)
Q Consensus 166 P~~-~~~~~Pf~~~-~~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~--------~dEE~g~-G~~~l~~~g~~~-- 229 (478)
|++ .|+.+||++. ++|++||||+ | |.+++++.|++.|++.+.+++ .|||.+. |.+.+++.....
T Consensus 80 p~~~~W~~~Pf~~~~~~g~lyGRGa~D~KG~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~ 159 (447)
T TIGR01887 80 PAGDGWTSPPFEAEIKDGRIYGRGTLDDKGPTIAALYAMKILKELGLKLKKKIRFIFGTDEETGWACIDYYFEHEEAPDI 159 (447)
T ss_pred CCCCCCcCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcHhHHHHHHhcCCCCE
Confidence 985 4788899986 5789999998 3 888888899999988764332 9999874 888777663211
Q ss_pred --CCcE---EEEEecC----------------------CCCCcceE-----Eeeccc----------------ccceee-
Q 011730 230 --DVEA---IFAVHVS----------------------HEHPTGVI-----GSRPGP----------------LLAGCG- 260 (478)
Q Consensus 230 --~~D~---~i~~~~~----------------------~~~~~g~i-----~~~~g~----------------~~~g~~- 260 (478)
..|. +++.+++ .+.+.+.+ ....+. -..|.+
T Consensus 160 ~~~~d~~~~~~~~e~g~~~~~~~v~g~~~~~~~i~~~~~Ge~tn~~p~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~ 239 (447)
T TIGR01887 160 GFTPDAEFPIIYGEKGIVTLEISFKDDTEGDVVLESFKAGEAFNMVPDHATAVISGKELLEVEKEKFVFFIAKELEGSFE 239 (447)
T ss_pred EEeCCCCcceEEEecCeEEEEEEeccCCCCceeEEEEeCCCcCCccCcceEEEEeccchhHHHHHHHHHhhhcCcceEEE
Confidence 1222 3333321 11222211 000000 001334
Q ss_pred ----EEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHH--hhhhc---------------------ccCC-CCCcEEEEE
Q 011730 261 ----FFHAVISGKKGGAANPHRSVDPVLAASAAVISLQ--GLVSR---------------------EANP-LDSQVVSVT 312 (478)
Q Consensus 261 ----~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~--~l~~~---------------------~~~~-~~~~~~~v~ 312 (478)
+++|+++|+++|+|.|+.|.|||..|++++..++ +...+ ...+ .+..++|+|
T Consensus 240 ~~~~~~~i~v~G~~aHss~p~~G~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t~nvg 319 (447)
T TIGR01887 240 VNDGTATITLEGKSAHGSAPEKGINAATYLALFLAQLNLAGGAKAFLQFLAEYLHEDHYGEKLGIDFHDDVSGDLTMNVG 319 (447)
T ss_pred ecCCEEEEEEEeeecccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCccccCCCcccCCCcCCcEEEEE
Confidence 7999999999999999999999999999999986 21100 0011 245678999
Q ss_pred EEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHHHHHH
Q 011730 313 YFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHVKKVA 392 (478)
Q Consensus 313 ~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~~~~~ 392 (478)
.|.|| +|++|++.+|+|++|+++.+++.+++.+.+. +. .++..... .+++ ....++++++.+.+++
T Consensus 320 ~I~~g-----~p~~~~~~~d~R~~p~~~~e~~~~~i~~~~~------~~-~~~~~~~~-~~p~-~~~~~~~lv~~l~~~~ 385 (447)
T TIGR01887 320 VIDYE-----NAEAGLIGLNVRYPVGNDPDTMLKNELAKES------GI-VEVTENGY-LKPL-YVPKDDPLVQTLMKVY 385 (447)
T ss_pred EEEEe-----CCcEEEEEEEEecCCCCCHHHHHHHHHHHhh------Cc-EEEEEccC-CCCe-EECCCCHHHHHHHHHH
Confidence 99988 3899999999999999999977777663322 11 22222210 0111 1235679999999999
Q ss_pred HHhcCCCcccccCCCCccchHHHHHHhcccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHH
Q 011730 393 IDLLGPMNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIA 463 (478)
Q Consensus 393 ~~~~G~~~~~~~~~~~g~tD~~~~~~~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~ 463 (478)
++.+|.++. .....++||+.++ |.+ +.+|+..+ |...++|++||++++++|..++++|.+++
T Consensus 386 ~~~~g~~~~--~~~~~ggtda~~~----~~~-i~~Gp~~p--G~~~~aH~~dE~v~i~~l~~~~~i~~~~~ 447 (447)
T TIGR01887 386 EKQTGDEGT--PVAIGGGTYARLM----ENG-VAFGALFP--GEEDTMHQANEYIMIDDLLLATAIYAEAI 447 (447)
T ss_pred HHHhCCCCC--eeEecchhhhhhC----CCc-EEeCCCCC--CCCCCccCCCcceeHHHHHHHHHHHHHhC
Confidence 998887642 2445777887764 332 23454321 23457999999999999999999999863
No 62
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-32 Score=270.10 Aligned_cols=353 Identities=17% Similarity=0.164 Sum_probs=260.7
Q ss_pred HHHHHHHHhhcCCCCCcc--hH-HHHHHHHHHHHhCCCcEEe---ccCCceEEEEE-cCCC-CcEEEEEEccccccCC--
Q 011730 99 WLKSVRRTIHQNPELAFQ--EF-ETSRLLRAELDRMEIGYKY---PLAKTGIRAWV-GTGG-PPFVALRADMDALPIQ-- 168 (478)
Q Consensus 99 ~l~~l~~~L~~iPs~s~~--E~-~~a~~l~~~L~~~G~~v~~---~~~~~~via~~-g~~~-~p~v~~~aHlDvVP~~-- 168 (478)
..+..+++.+|||++-.+ -. ..++|+..+.+.+|..++. ..+.++++.+| |+.+ -|.|+|++|.||||+.
T Consensus 26 ~~v~~f~eylRi~Tv~p~~dy~~a~~~Fl~~~a~~l~l~~~~i~~~p~~~~~l~T~~GS~P~L~silL~SH~DVVP~f~e 105 (420)
T KOG2275|consen 26 ISVTRFREYLRIPTVQPNPDYTIACADFLKKYAKSLGLTVQKIESEPGKYVLLYTWLGSDPELPSILLNSHTDVVPVFRE 105 (420)
T ss_pred hHHHHHHHHhhccccccCCCccHHHHHHHHHHHHhcCCceeEEEecCceeEEEEEeeCCCCCccceeeeccccccCCCcc
Confidence 456667778888886432 23 6899999999999987643 34578899998 7664 5999999999999975
Q ss_pred CCCCCCcccc--cCCeEEeCcch---HHHHHHHHHHHHHHhcCCCCC--------CCccCC--CcHHHHHHcCCCCCCcE
Q 011730 169 EAVEWEYKSK--VAGKMHACGHD---AHVAMLIGAAKILKSREHLLK--------PAEEAG--NGAKRMMADGALEDVEA 233 (478)
Q Consensus 169 ~~~~~Pf~~~--~~G~~~g~G~d---g~~a~~l~aa~~L~~~~~~l~--------~dEE~g--~G~~~l~~~g~~~~~D~ 233 (478)
.|+.+||... .+|.+||||+. +.+++.|.|++.|+..+.+.. +|||.+ .|++.+.+...+++...
T Consensus 106 ~W~h~Pfsa~~~~~g~IyaRGaqD~K~~~va~leAir~L~~~g~kp~Rti~lsfvpDEEi~G~~Gm~~fa~~~~~~~l~~ 185 (420)
T KOG2275|consen 106 KWTHPPFSAFKDEDGNIYARGAQDMKCVGVAYLEAIRNLKASGFKPKRTIHLSFVPDEEIGGHIGMKEFAKTEEFKKLNL 185 (420)
T ss_pred cCccCCccccccCCCcEEeccccchHhHHHHHHHHHHHHHhcCCCcCceEEEEecCchhccCcchHHHHhhhhhhcccce
Confidence 4588899985 57999999983 788889999999998876543 999987 48888888555666666
Q ss_pred EEEEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhc---------ccCCC
Q 011730 234 IFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSR---------EANPL 304 (478)
Q Consensus 234 ~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~---------~~~~~ 304 (478)
.++++-..-.+... ...+...+|.+|++++++|++||+|.|.. ..|+.++.++|..+.+...+ .....
T Consensus 186 ~filDEG~~se~d~--~~vfyaEkg~w~~~v~~~G~~GHss~~~~-nTa~~~l~klv~~~~~fr~~q~~~l~~~p~~~~~ 262 (420)
T KOG2275|consen 186 GFILDEGGATENDF--ATVFYAEKGPWWLKVTANGTPGHSSYPPP-NTAIEKLEKLVESLEEFREKQVDLLASGPKLALG 262 (420)
T ss_pred eEEecCCCCCcccc--eeEEEEeeceeEEEEEecCCCCCCCCCCC-ccHHHHHHHHHHHHHHhHHHHHHHhhcCCceecc
Confidence 66665221111112 22233445889999999999999998322 25677777777776654311 11124
Q ss_pred CCcEEEEEEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHH-HHHHHHHHhhcCCeeEEEEecCCCCCCC---CccC
Q 011730 305 DSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRI-EEVIVEQARVFRCSATVDFFDKGNTVYP---PTVN 380 (478)
Q Consensus 305 ~~~~~~v~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i-~~~~~~~~~~~g~~~ev~~~~~~~~~~~---~~~~ 380 (478)
+.+++|++.|+||.+.|++|++.++.+|+|..+..+..++.+++ ++++++ .+..+++++.......++ +...
T Consensus 263 ~vtT~Nv~~i~GGv~~N~~P~~~ea~~dirv~~~~d~~~i~~~l~~~w~~~----~~eg~t~~f~~~~~~~~~~~t~~~~ 338 (420)
T KOG2275|consen 263 DVTTINVGIINGGVQSNVLPETFEAAFDIRVRPHVDVKAIRDQLEDEWAEE----AGEGVTLEFSQKVILDYPPVTPTDD 338 (420)
T ss_pred ceeEEeeeeeecccccCcCchhheeeeeeEeccCCCHHHHHHHHHHHhhhh----cCCceEEeccCcccCCCCCCCCCCC
Confidence 67899999999999999999999999999999999999999999 666554 455566666542111232 2334
Q ss_pred CHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHh-cccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHH
Q 011730 381 DEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV-VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVH 459 (478)
Q Consensus 381 d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~-iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~ 459 (478)
+.++...+..++++..+ +. .+...+|+||.+++... +|..-+ .+..+. ....|..||+...+...+|+++|
T Consensus 339 s~p~w~~~~~a~~~~~~-k~--~~~i~~gstdsr~~rn~gvp~~~f-sp~~nt----~~~~H~hnE~l~~~~~l~gi~~~ 410 (420)
T KOG2275|consen 339 SNPFWTAFAGALKDEGG-KG--YPEIGPGSTDSRHIRNEGVPAIGF-SPIINT----PMLLHDHNEFLNEKVFLRGIEIY 410 (420)
T ss_pred CChHHHHHHHHHHHhcC-cc--ceeecccccccchhhhcCcchhcc-cccccc----cceecchhhhhCchhhhhhhhHH
Confidence 56899999999998643 33 24677899999998764 776543 343332 36799999999999999999999
Q ss_pred HHHHHHH
Q 011730 460 ATIAERF 466 (478)
Q Consensus 460 a~~~~~l 466 (478)
..++..+
T Consensus 411 ~~~i~~~ 417 (420)
T KOG2275|consen 411 YTIIVNL 417 (420)
T ss_pred HHHHHhh
Confidence 9987655
No 63
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=99.96 E-value=1.7e-26 Score=225.28 Aligned_cols=368 Identities=16% Similarity=0.116 Sum_probs=261.5
Q ss_pred HHHHHHHhcCcchHHHHHHHHHHhhcCCCCCcch------HHHHHHHHHHHHhCCCcEEecc-------------CCceE
Q 011730 84 SKEVMELARRPETVDWLKSVRRTIHQNPELAFQE------FETSRLLRAELDRMEIGYKYPL-------------AKTGI 144 (478)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~l~~~L~~iPs~s~~E------~~~a~~l~~~L~~~G~~v~~~~-------------~~~~v 144 (478)
...+.+.+ |..++++++.+++.++|+|+|... .+.++|+.++|+++|-+++..+ ..+-+
T Consensus 4 l~~~fq~i--d~~~de~~~~L~e~v~iqsvs~dp~~r~~v~rm~~~~~~~l~~lG~~~~l~dlg~q~~~~g~~v~lPpvv 81 (473)
T KOG2276|consen 4 LTKVFQSI--DLNKDEFINTLREAVAIQSVSADPTKRLEVRRMADWLRDYLTKLGAPLELVDLGYQSLPDGQIVPLPPVV 81 (473)
T ss_pred HHHHHHHh--hccHHHHHHHHHHHhcccccccCccccHHHHHHHHHHHHHHHHhCCceeeeecccCCCCCCcccccChhh
Confidence 46788899 999999999999999999998754 5789999999999996655311 12346
Q ss_pred EEEEcCCC-CcEEEEEEccccccCC---CCCCCCcccc-cCCeEEeCcch---HHHHHHHHHHHHHHhcCCCCC------
Q 011730 145 RAWVGTGG-PPFVALRADMDALPIQ---EAVEWEYKSK-VAGKMHACGHD---AHVAMLIGAAKILKSREHLLK------ 210 (478)
Q Consensus 145 ia~~g~~~-~p~v~~~aHlDvVP~~---~~~~~Pf~~~-~~G~~~g~G~d---g~~a~~l~aa~~L~~~~~~l~------ 210 (478)
.+++|+.+ .+++++++||||+|+. .|..+||... .+|+++|||+. |.+++-+.+++++++.+..|+
T Consensus 82 l~~~Gsdp~KktvlvYgHlDVqpA~~~DgW~TdPF~Lt~~~GkL~GRG~TDdkGPv~~wi~av~a~~~~g~~lpvnv~f~ 161 (473)
T KOG2276|consen 82 LGVLGSDPSKKTVLVYGHLDVQPANLEDGWNTDPFTLTEDDGKLFGRGATDDKGPVLSWIHAVKALQQLGIDLPVNVVFV 161 (473)
T ss_pred hhcccCCCCcceEEEEeeeeeeecCCCCCCcCCCeEEEEECCEEeccCcCCCCccchHHHHHHHHHHHhCccccceEEEE
Confidence 77777764 6899999999999976 4577799975 57999999983 899999999999999988776
Q ss_pred --CCccCCC-cHHHHHH---cCCCCCCcEEEEEecCCCCCcceEEeecccccceeeEEEEEEEe--ecCCCCC-CCCCCC
Q 011730 211 --PAEEAGN-GAKRMMA---DGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISG--KKGGAAN-PHRSVD 281 (478)
Q Consensus 211 --~dEE~g~-G~~~l~~---~g~~~~~D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G--~~~Has~-p~~g~N 281 (478)
.-||.|+ |-..+++ +.+++++|++.+.+.. ..-.....+..|.| |...+.++++| +..||+. ..--.-
T Consensus 162 ~EgmEEsgS~~L~~l~~~~kD~~~~~vD~vciSdny-Wlg~kkPcltyGlR--G~~yf~i~v~g~~~DlHSGvfGG~~hE 238 (473)
T KOG2276|consen 162 FEGMEESGSEGLDELIEKEKDKFFKDVDFVCISDNY-WLGTKKPCLTYGLR--GVIYFQIEVEGPSKDLHSGVFGGVVHE 238 (473)
T ss_pred EEechhccCccHHHHHHHHhhhhhccCCEEEeeCce-eccCCCcccccccc--cceeEEEEEeecccccccccccchhHH
Confidence 7788774 6555554 4567789998876521 11111233455655 67789999999 7889995 333346
Q ss_pred HHHHHHHHHHHHHhhhhc----------------c---------------------cCCCC-----------CcEEEEEE
Q 011730 282 PVLAASAAVISLQGLVSR----------------E---------------------ANPLD-----------SQVVSVTY 313 (478)
Q Consensus 282 Ai~~~~~~i~~l~~l~~~----------------~---------------------~~~~~-----------~~~~~v~~ 313 (478)
|+..+..++..|.....+ + ..+.. -..+++..
T Consensus 239 ~m~dL~~~ms~Lv~~~~~Ilipgiy~~vaplteeE~~~y~~I~f~~~e~~~~tg~~~l~~~~k~~~l~~rWryPSLsihg 318 (473)
T KOG2276|consen 239 AMNDLVLVMSSLVDIQGRILIPGIYEDVAPLTEEEDSIYDDIDFDVEEFKEATGSQMLPTDDKKRILMHRWRYPSLSIHG 318 (473)
T ss_pred HHHHHHHHHHHhcCcCCcEeccchhhhccCCChHHHhhhhcceeeHhhhhccccccccccCchHHHhhhhcccCccceec
Confidence 676677666666322100 0 00101 12244544
Q ss_pred Ee----CCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcC--CeeEEEEecCCCCCCC-CccCCHHHHH
Q 011730 314 FN----GGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFR--CSATVDFFDKGNTVYP-PTVNDEDMYE 386 (478)
Q Consensus 314 i~----gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g--~~~ev~~~~~~~~~~~-~~~~d~~l~~ 386 (478)
|. |..+..|||.++.-.|.+|.+|+++.+.+...+.+.+++.-+..+ .+++++... .+.+ ....+++-+.
T Consensus 319 IeGaFs~pG~kTVIP~kVigkfSiRlVP~md~e~verlv~~yl~~~f~~~nS~N~l~~~~~~---~~~~Wv~d~~~~~y~ 395 (473)
T KOG2276|consen 319 IEGAFSGPGAKTVIPAKVVGKFSIRLVPNMDPEQVERLVTRYLEKVFAELNSPNKLKVSMGH---AGAPWVSDPDDPHYL 395 (473)
T ss_pred ccceeeCCCceEEeehhheeeeEEEecCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEeecC---CCCceecCCCchhHH
Confidence 44 445789999999999999999999999999999998887655443 456666542 1222 2345778899
Q ss_pred HHHHHHHHhcCCCcccccCCCCccchHHH-HHHh--cccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHHHHHHH
Q 011730 387 HVKKVAIDLLGPMNYRVVPPMMGAEDFSF-YSEV--VPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIA 463 (478)
Q Consensus 387 ~~~~~~~~~~G~~~~~~~~~~~g~tD~~~-~~~~--iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~ 463 (478)
.+++++++++|.+|-. ..-+|+-.... |++. .|.+. ++.|..+ .++|+.||.+++..+..|++++++++
T Consensus 396 a~krA~~~v~gvePd~--~ReGgSIPvt~tfQ~~~~~~V~l--lP~G~~d----D~aHsqNEkl~i~N~~~G~k~l~ay~ 467 (473)
T KOG2276|consen 396 ALKRAIETVYGVEPDF--TREGGSIPVTLTFQDITGKSVLL--LPYGASD----DGAHSQNEKLNITNYVEGTKVLAAYI 467 (473)
T ss_pred HHHHHHHHhhCCCCCc--cccCCccceehHHHHHhCCCeEE--ecccccc----cchhhhcccccHHHHhhhHHHHHHHH
Confidence 9999999999987631 22233333333 3332 34444 4444222 47999999999999999999999999
Q ss_pred HHHH
Q 011730 464 ERFL 467 (478)
Q Consensus 464 ~~ll 467 (478)
.+|.
T Consensus 468 ~el~ 471 (473)
T KOG2276|consen 468 SELA 471 (473)
T ss_pred HHHh
Confidence 8874
No 64
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=99.86 E-value=2e-20 Score=190.06 Aligned_cols=342 Identities=17% Similarity=0.191 Sum_probs=250.9
Q ss_pred HHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcE-Eec-------c--CCce-EEEEEcC-C-CCcEEEEEEccc
Q 011730 97 VDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGY-KYP-------L--AKTG-IRAWVGT-G-GPPFVALRADMD 163 (478)
Q Consensus 97 ~~~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v-~~~-------~--~~~~-via~~g~-~-~~p~v~~~aHlD 163 (478)
.++|++.+.+++.||+.|++|.+++.++.+|++.+|+.+ .+. . .+.| +.+++.+ . .-|.+.|.+|||
T Consensus 4 ~~~l~~~F~~~~kI~~~S~~e~~~~p~~~~~~k~~~~~v~dE~~~i~~~~~a~~~~~~~~~~L~a~~d~V~~i~~~sh~D 83 (414)
T COG2195 4 MERLLDRFLELVKIPTQSKHEKAVAPSTVGQAKLLGLLVEDELGNIGLKKPATAGENYVPAVLQAHLDMVPEIGFISHHD 83 (414)
T ss_pred hHHHHHHHHHHeeCCCCCCCccccccccHHHHHHcCchhhhhhccccccccccCCCCeeeEEeecccccccccccccccc
Confidence 678999999999999999999999999999999999988 321 1 1122 4444533 2 248899999999
Q ss_pred cccCC-------CC---------------------CCCCcccc--cCCeEEe-----Ccch--HHHHHHHHHHHHHHhcC
Q 011730 164 ALPIQ-------EA---------------------VEWEYKSK--VAGKMHA-----CGHD--AHVAMLIGAAKILKSRE 206 (478)
Q Consensus 164 vVP~~-------~~---------------------~~~Pf~~~--~~G~~~g-----~G~d--g~~a~~l~aa~~L~~~~ 206 (478)
|+|-. ++ ...|.... .++.+.. -|.| ++.+.++.++..+++..
T Consensus 84 t~~d~~~~~v~~~~l~~~~Gad~i~~~~~~a~L~~~~~P~~~~~t~~~ei~~dGa~LLgaD~kAGia~i~~al~~~~~~~ 163 (414)
T COG2195 84 TVPDPIGPNVNPQILKATLGADNIGLAIGLAVLSPEHFPLEVLLTGDEEITTDGATLLGADDKAGIAEIMTALSVLREKH 163 (414)
T ss_pred ccccccccccCCceeeeccCcchhhhhhHHhhcCcccCCceeeeecceEEeccCccccCCcchhHHHHHHHHHHHHhhcC
Confidence 99621 11 01222211 1112222 3333 66777778888888553
Q ss_pred CCC---------CCCccCC-CcHHHHHHcCCCCCCcEEEEEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCC-
Q 011730 207 HLL---------KPAEEAG-NGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAAN- 275 (478)
Q Consensus 207 ~~l---------~~dEE~g-~G~~~l~~~g~~~~~D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~- 275 (478)
.++ .++||.+ .|+..+.-..+ .+|+.+..+ +.+.|.+....- +...+++++.|+.+|++.
T Consensus 164 ~~i~h~~i~~g~s~~Ee~g~rg~~~~~~a~f--~a~~ay~iD---Gg~~g~i~~ea~----~~~~~~~~~~g~~~h~~~a 234 (414)
T COG2195 164 PEIPHGGIRGGFSPDEEIGGRGAANKDVARF--LADFAYTLD---GGPVGEIPREAF----NAAAVRATIVGPNVHPGSA 234 (414)
T ss_pred ccccccCeEEEecchHHhhhhhhhhccHHhh--hcceeEecC---CCccCeeeeecc----chheeeeeeeccCcCccch
Confidence 222 2999987 58776654432 366777666 233455543221 356789999999999996
Q ss_pred CCCCCCHHHHHHHHHHHHHhhhhcccCCCCCcEEEEEEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHH
Q 011730 276 PHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQ 355 (478)
Q Consensus 276 p~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~v~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~ 355 (478)
+...+||++.+..++..+... +.. ..+..+.|..+++...|.|.+++.+.+.+|...........+.+++.+++.
T Consensus 235 ~~~~i~a~~~a~e~~~~~~~~---~~~--e~t~~~~Gv~~~~~~~~~V~~~s~~~~~iR~~d~~~~~s~~~~~~~~~~~~ 309 (414)
T COG2195 235 KGKMINALLLAAEFILELPLE---EVP--ELTEGPEGVYHLGDSTNSVEETSLNLAIIRDFDNLLFRARKDSMKDVVEEM 309 (414)
T ss_pred HHHHhhHHHhhhhhhhcCCcc---ccc--ccccccceEEeccccccchhhhhhhhhhhhhcchhHHHHhHHHHHHHHHHH
Confidence 777889999888877766532 111 235567888899999999999999999999999999999999999999999
Q ss_pred HhhcC--CeeEEEEecCCCCCCCCc--cCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHHh-cccceEEeccc
Q 011730 356 ARVFR--CSATVDFFDKGNTVYPPT--VNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSEV-VPAAFYYIGIK 430 (478)
Q Consensus 356 ~~~~g--~~~ev~~~~~~~~~~~~~--~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~~-iP~~~~~~G~~ 430 (478)
+..++ ..++++... .||.. ..++.+++.++++++++ +.++. ..++.||+|.+.++.+ .|+.++++|++
T Consensus 310 ~~~~g~~~~~~~~~~~----~Yp~~~~~~~~~iv~~a~~a~~~l-~~~p~--v~~i~gGtd~~~is~~g~p~~~i~~Gp~ 382 (414)
T COG2195 310 AASLGKLAGAELEVKD----SYPGWKIKPDSPLVDLAKKAYKEL-GIKPK--VKPIHGGTDGGVLSFKGLPTPNISTGPG 382 (414)
T ss_pred HHHhhhccceEEEEec----cccCcCCCCCchHHHHHHHHHHHh-CCCce--EEEeecccchhhhhccCCCCceEecccc
Confidence 88888 778887764 45543 34678999999999996 55453 4678899999998875 89999988962
Q ss_pred CCCCCCCCCCCCCCcccCcCchHHHHHHHHHHHHHH
Q 011730 431 NETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERF 466 (478)
Q Consensus 431 ~~~~~~~~~~H~~dE~i~~~~l~~~~~i~a~~~~~l 466 (478)
.+.|+++|+++++++.+...++.+++..+
T Consensus 383 -------~n~Hs~~E~v~I~s~ek~~~~l~~l~~~~ 411 (414)
T COG2195 383 -------ENPHSPDEFVSIESMEKAVQVLVELLKLA 411 (414)
T ss_pred -------cCCCCccceeehHHHHHHHHHHHHHHHHh
Confidence 46999999999999999999999987754
No 65
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.71 E-value=3.7e-17 Score=151.06 Aligned_cols=169 Identities=25% Similarity=0.281 Sum_probs=123.0
Q ss_pred EEEEccccccC-CCCCCCCcccc-cCCeEEeCcch---HHHHHHHHHHHHHHhcCCCCC--------CCccCCC--cHHH
Q 011730 157 ALRADMDALPI-QEAVEWEYKSK-VAGKMHACGHD---AHVAMLIGAAKILKSREHLLK--------PAEEAGN--GAKR 221 (478)
Q Consensus 157 ~~~aHlDvVP~-~~~~~~Pf~~~-~~G~~~g~G~d---g~~a~~l~aa~~L~~~~~~l~--------~dEE~g~--G~~~ 221 (478)
+|++||||||. ..|..+||... ++|++||||++ +.+++++.+++.+++.+.++. ++||.++ |++.
T Consensus 1 ll~~H~Dtv~~~~~w~~~pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~~~ 80 (189)
T PF01546_consen 1 LLYAHMDTVPGPEGWKHDPFELSIEDGRLYGRGADDMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGAKH 80 (189)
T ss_dssp EEEEES-BCSTGGGSSSSTTSEEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHHHH
T ss_pred CccccccccCCcCcCCCCCcccEEECCEEEcCCcCCCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchhhh
Confidence 68999999993 34577899875 67999999983 788888999999987665544 9999885 9999
Q ss_pred HHHcCC--CCCCcEEEEEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhc
Q 011730 222 MMADGA--LEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSR 299 (478)
Q Consensus 222 l~~~g~--~~~~D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~ 299 (478)
+++++. ..++|+++..+++.. +...
T Consensus 81 l~~~~~~~~~~~~~~~~~e~~~~---------------~~~~-------------------------------------- 107 (189)
T PF01546_consen 81 LLEEGAFFGLHPDYVIIGEPTGK---------------GGVG-------------------------------------- 107 (189)
T ss_dssp HHHHCEEEEEEESEEEECECETT---------------SEEE--------------------------------------
T ss_pred hhhhccccccccccccccccccc---------------cccc--------------------------------------
Confidence 999852 123566666554321 0000
Q ss_pred ccCCCCCcEEEEEEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCcc
Q 011730 300 EANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTV 379 (478)
Q Consensus 300 ~~~~~~~~~~~v~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~ 379 (478)
..
T Consensus 108 ------------------------------------------------------------------------------~~ 109 (189)
T PF01546_consen 108 ------------------------------------------------------------------------------SD 109 (189)
T ss_dssp ------------------------------------------------------------------------------HC
T ss_pred ------------------------------------------------------------------------------cc
Confidence 23
Q ss_pred CCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHH--hcccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHH
Q 011730 380 NDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE--VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAA 457 (478)
Q Consensus 380 ~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~--~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~ 457 (478)
.++++++.+++++++.++... ....+++++|++++.. ..+..+.++|++. .++|++||+++++++.++++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~tD~~~~~~~~~~~~~~i~~G~~~------~~~H~~~E~i~~~~l~~~~~ 181 (189)
T PF01546_consen 110 NDPPLVQALQAAAQEVGGEPP--EPVASGGGTDAGFLAEVKGLGIPAIGFGPGG------SNAHTPDEYIDIEDLVKGAK 181 (189)
T ss_dssp TCHHHHHHHHHHHHHTTSSEE--EEEEESSSSTHHHHHCHHHTTEEEEEEESCE------ESTTSTT-EEEHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhccc--cccceeccccchhhhhhhccccceeeeCCCC------CCCCCCCcEecHHHHHHHHH
Confidence 577899999999999755222 3467789999999995 3222333456543 36999999999999999999
Q ss_pred HHHHHHH
Q 011730 458 VHATIAE 464 (478)
Q Consensus 458 i~a~~~~ 464 (478)
+|++++.
T Consensus 182 ~~~~~l~ 188 (189)
T PF01546_consen 182 IYAALLE 188 (189)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999875
No 66
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=99.68 E-value=4e-16 Score=131.74 Aligned_cols=102 Identities=21% Similarity=0.317 Sum_probs=92.4
Q ss_pred ceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhcc-----cCCCCCcEEEEEEEeCCCccceecCcEEEEE
Q 011730 257 AGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSRE-----ANPLDSQVVSVTYFNGGDHLDMIPDAVVIGG 331 (478)
Q Consensus 257 ~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~~-----~~~~~~~~~~v~~i~gG~~~NvIP~~a~~~~ 331 (478)
.|..+++|+++|+++|+|.|+.|+||+..|++++..|+.+..+. ...+...+++++.++||...|+||++|++.+
T Consensus 4 ~G~~~~~i~~~G~~~H~s~~~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~~~n~ip~~a~~~~ 83 (111)
T PF07687_consen 4 RGVIWFRITITGKSGHSSRPEKGVNAIEAAARFLNALEELEFEWAFRPEEFFPGPPTLNIGSIEGGTAPNVIPDEATLTV 83 (111)
T ss_dssp EEEEEEEEEEESBSEETTSGGGSBCHHHHHHHHHHHHHHTTCHBTSTHHHCTCTSEEEEEEEEEEESSTTEESSEEEEEE
T ss_pred CCEEEEEEEEEeeccCCCCccCccCHHHHHHHHHHHHHHhhcccccccccccccccceeEeecccCCcCCEECCEEEEEE
Confidence 47889999999999999999999999999999999999885332 2345678999999999999999999999999
Q ss_pred EEeccChHhHHHHHHHHHHHHHHHHhh
Q 011730 332 TLRAFSNTSFYQLLQRIEEVIVEQARV 358 (478)
Q Consensus 332 diR~~p~~~~~~i~~~i~~~~~~~~~~ 358 (478)
++|++|.++.+++.+.|++.+++.+.+
T Consensus 84 ~~R~~p~~~~~~i~~~i~~~~~~~~~~ 110 (111)
T PF07687_consen 84 DIRYPPGEDLEEIKAEIEAAVEKIAKK 110 (111)
T ss_dssp EEEESTCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCcchHHHHHHHHHHHHHHhhhC
Confidence 999999999999999999999987654
No 67
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=99.27 E-value=7.4e-10 Score=111.79 Aligned_cols=69 Identities=20% Similarity=0.252 Sum_probs=60.3
Q ss_pred HHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEeccCCceEEEEEcC-CCCcEEEEEEcccccc
Q 011730 97 VDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGT-GGPPFVALRADMDALP 166 (478)
Q Consensus 97 ~~~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~g~-~~~p~v~~~aHlDvVP 166 (478)
.+.+++++++|+++|++|+.|.++++++.++|+++|++++.+ ...|+++++.+ .++|+|+|.||||+|.
T Consensus 2 ~~~~~~lLk~Lv~~~s~SG~E~~V~~~l~~~l~~~g~ev~~D-~~Gnlia~~~g~~~~~~v~l~aHmDevG 71 (343)
T TIGR03106 2 TDYLTETLLALLAIPSPTGFTDAVVRYVAERLEDLGIEYELT-RRGAIRATLPGREATPARAVVTHLDTLG 71 (343)
T ss_pred hHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCeEEEC-CCeEEEEEECCCCCCCeEEEEEeecccc
Confidence 356889999999999999999999999999999999998764 55789998743 3468999999999997
No 68
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=99.25 E-value=2.7e-10 Score=113.49 Aligned_cols=250 Identities=15% Similarity=0.146 Sum_probs=153.7
Q ss_pred HHHHHHHHHHhhcCCCCCc--chHHHHHHHHHHHHhCCC-c-----EEe-----cc-CCceEEEEEcC-CCCcEEEEEEc
Q 011730 97 VDWLKSVRRTIHQNPELAF--QEFETSRLLRAELDRMEI-G-----YKY-----PL-AKTGIRAWVGT-GGPPFVALRAD 161 (478)
Q Consensus 97 ~~~l~~l~~~L~~iPs~s~--~E~~~a~~l~~~L~~~G~-~-----v~~-----~~-~~~~via~~g~-~~~p~v~~~aH 161 (478)
.+++.++...|++.||+.+ .|...+++|...|+++.. + +.. ++ ++.||+|.+.+ ++..+|++.||
T Consensus 7 ~e~v~~lt~~LV~~~SvtgT~GE~a~ad~l~~vL~~~pYFqehped~~~~pi~nDpygR~nv~AlVrg~~~k~tvvl~gH 86 (553)
T COG4187 7 SERVRALTLSLVSWPSVTGTPGEGAFADRLLGVLGELPYFQEHPEDLWLQPIHNDPYGRRNVFALVRGGTSKRTVVLHGH 86 (553)
T ss_pred HHHHHHHHHHHeeccccCCCcccccHHHHHHHHHhcCchhhhChHhhcccCCCCCccccceeEEEEecCCCCceEEEeec
Confidence 5788899999999999976 578889999999998753 2 211 11 56799999854 45689999999
Q ss_pred cccccCCCC---C---CCC------------c---ccc---c-CCeEEeCcc-h--HHHHHHHHHHHHHHhcCCCCC---
Q 011730 162 MDALPIQEA---V---EWE------------Y---KSK---V-AGKMHACGH-D--AHVAMLIGAAKILKSREHLLK--- 210 (478)
Q Consensus 162 lDvVP~~~~---~---~~P------------f---~~~---~-~G~~~g~G~-d--g~~a~~l~aa~~L~~~~~~l~--- 210 (478)
+|||-..+. . .+| + +.. . .+++.|||. | ++.|+.|++++.+.+.. .++
T Consensus 87 ~DtV~iedYg~lKd~Afdp~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~DMKsGlav~la~L~~fa~~~-~~~GNl 165 (553)
T COG4187 87 FDTVSIEDYGELKDLAFDPLALLDALIESLELREERVLRDLESGDWLFGRGALDMKSGLAVHLACLEEFAART-DRQGNL 165 (553)
T ss_pred cceeecccccchhhhccCHHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchhhhhhhHHHHHHHHHHhhCC-CCCCcE
Confidence 999987553 1 233 1 011 1 247899998 4 77888888888777653 222
Q ss_pred -----CCccCC-CcHHHHHHc--CCCC--CCc--EEEEEecCCCCCcceE--EeecccccceeeEEEEEEEeecCCCCCC
Q 011730 211 -----PAEEAG-NGAKRMMAD--GALE--DVE--AIFAVHVSHEHPTGVI--GSRPGPLLAGCGFFHAVISGKKGGAANP 276 (478)
Q Consensus 211 -----~dEE~g-~G~~~l~~~--g~~~--~~D--~~i~~~~~~~~~~g~i--~~~~g~~~~g~~~~~i~v~G~~~Has~p 276 (478)
||||.- .|.+..+.. ++.+ +.+ ++|..+++...-.|.- ....|.. |.+---.-+.|+..|.|.|
T Consensus 166 Lf~a~pdEE~~s~G~r~a~~~L~~L~kk~~l~~~~~IN~D~~~~~~dGd~~ryvYtGti--GKLLp~f~vvG~etHvG~~ 243 (553)
T COG4187 166 LFMAVPDEEVESRGMREARPALPGLKKKFDLEYTAAINLDVTSDQGDGDQGRYVYTGTI--GKLLPFFFVVGCETHVGYP 243 (553)
T ss_pred EEEeccchhhhcccHHHHHHHHHHHHHhhCceEEEEeccccccCCCCCccceEEEeccc--hhhcceeEEEeeccccCCc
Confidence 999975 576654332 1111 233 3455454432222211 1223332 3333445688999999999
Q ss_pred CCCCCHHHHHHHHHHHHHhh---hhcccCC--CCCcEEEEEEEeCCCccce-ecCcEEEEEEEeccChHhHHHHHHHHHH
Q 011730 277 HRSVDPVLAASAAVISLQGL---VSREANP--LDSQVVSVTYFNGGDHLDM-IPDAVVIGGTLRAFSNTSFYQLLQRIEE 350 (478)
Q Consensus 277 ~~g~NAi~~~~~~i~~l~~l---~~~~~~~--~~~~~~~v~~i~gG~~~Nv-IP~~a~~~~diR~~p~~~~~~i~~~i~~ 350 (478)
..|+||-..++.++.+|+-- ..+.... +.+.++.. -.=-.+.|| .|.++.+.|++=+... +.+++.+++++
T Consensus 244 f~Gvnan~maSei~~~le~N~~l~dr~~Ge~t~PPs~L~q--kDlKe~Y~VqTp~~a~~~fN~l~h~~-ta~~~~d~l~~ 320 (553)
T COG4187 244 FEGVNANFMASEITRRLELNADLADRVDGEITPPPSCLEQ--KDLKESYNVQTPERAWLYFNWLYHSR-TAKELFDRLKE 320 (553)
T ss_pred ccCCCHHHHHHHHHHHhhcChhhhhhhCCeeCCCcHhhhh--hhhhhhccccCcchhhhhheehhhcC-CHHHHHHHHHH
Confidence 99999999999999988632 1221111 01111110 011235676 6889999998855432 33444444443
Q ss_pred HH
Q 011730 351 VI 352 (478)
Q Consensus 351 ~~ 352 (478)
.+
T Consensus 321 ~a 322 (553)
T COG4187 321 EA 322 (553)
T ss_pred HH
Confidence 33
No 69
>PRK09961 exoaminopeptidase; Provisional
Probab=99.24 E-value=6.2e-11 Score=119.89 Aligned_cols=65 Identities=20% Similarity=0.281 Sum_probs=57.0
Q ss_pred HHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEeccCCceEEEEEcCCCCcEEEEEEcccccc
Q 011730 101 KSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALP 166 (478)
Q Consensus 101 ~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~g~~~~p~v~~~aHlDvVP 166 (478)
++++++|+++|++|+.|.++++++.++|+++|++++.+ ...|+++++++.++|+|+|.||||+|+
T Consensus 3 ~~~L~~L~~~~s~sG~E~~v~~~i~~~l~~~~~~v~~D-~~Gnvi~~~~g~~~~~v~l~aHmDevg 67 (344)
T PRK09961 3 LSLLKALSEADAIASSEQEVRQILLEEADRLQKEVRFD-GLGSVLIRLNESTGPKVMICAHMDEVG 67 (344)
T ss_pred HHHHHHHHhCCCCCCChHHHHHHHHHHHHhhCCEEEEC-CCCCEEEEEcCCCCCEEEEEeccceec
Confidence 36799999999999999999999999999999998764 556899987444468999999999998
No 70
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=99.08 E-value=1.3e-09 Score=110.20 Aligned_cols=293 Identities=15% Similarity=0.113 Sum_probs=156.5
Q ss_pred HHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEeccCCceEEEEEcC--CCCcEEEEEEccccccC--CCCCCCCccc
Q 011730 102 SVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGT--GGPPFVALRADMDALPI--QEAVEWEYKS 177 (478)
Q Consensus 102 ~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~g~--~~~p~v~~~aHlDvVP~--~~~~~~Pf~~ 177 (478)
+++++|.++|++|+.|.++++++.++|++++.+++++ .-.|+++.+++ +.+|+|+|.+|||+|+- ..-
T Consensus 2 ~~L~~L~~~~gpSG~E~~v~~~i~~~l~~~~~~v~~D-~~GNvia~~~g~~~~~~~vml~AHmDeVGf~V~~I------- 73 (350)
T TIGR03107 2 NKIKEVTELQGTSGFEHPIRDYLRQDITPLVDQVETD-GLGGIFGIKESQVENAPRVMVAAHMDEVGFMVSQI------- 73 (350)
T ss_pred hHHHHHHhCCCCCCCcHHHHHHHHHHHHhhCCEEEEC-CCCCEEEEecCCCCCCCEEEEEecccEeCEEEEEE-------
Confidence 5689999999999999999999999999999988765 34589998744 23689999999999982 100
Q ss_pred ccCCeEEe--Ccc-h-----------------------HHHHHHHHHHHHHHh-c-CCCCCCCccC----C-CcHHHHHH
Q 011730 178 KVAGKMHA--CGH-D-----------------------AHVAMLIGAAKILKS-R-EHLLKPAEEA----G-NGAKRMMA 224 (478)
Q Consensus 178 ~~~G~~~g--~G~-d-----------------------g~~a~~l~aa~~L~~-~-~~~l~~dEE~----g-~G~~~l~~ 224 (478)
..+|.++- .|. + |.....+ +.. . +.+...-+|. | .......+
T Consensus 74 ~~~G~l~~~~vGG~~~~~l~gq~V~i~t~~g~~i~GViG~~~~Hl-----~~~~~~~~~~~~~~~l~IDiGa~skee~~~ 148 (350)
T TIGR03107 74 KPDGTFRVVELGGWNPLVVSSQRFTLFTRKGKKYPVISGSVPPHL-----LRGSSGGPQLPAVSDILFDGGFTNKDEAWS 148 (350)
T ss_pred CCCceEEEEeCCCccccccCCcEEEEEeCCCCEEEEEEeCCcccc-----cChhhcccccCChhhEEEEeCCCCHHHHHh
Confidence 01232221 110 0 0000000 000 0 0000000000 0 01111212
Q ss_pred cCCCCCCcEEEEEecCCCCCcceEEeecccccceeeEEEEEEEeecCCCCCCCCCCCHHHHHHHHHHHHHhhhhcccCCC
Q 011730 225 DGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPL 304 (478)
Q Consensus 225 ~g~~~~~D~~i~~~~~~~~~~g~i~~~~g~~~~g~~~~~i~v~G~~~Has~p~~g~NAi~~~~~~i~~l~~l~~~~~~~~ 304 (478)
.|.- --|.+. +.+.. .....+ =.+.|+ ....+=....+..++.++++. . +
T Consensus 149 ~GI~-vGd~v~-~~~~~------~~~~~~----------~~i~~k------alDdR~g~a~l~e~l~~l~~~---~---~ 198 (350)
T TIGR03107 149 FGVR-PGDVIV-PQTET------ILTANG----------KNVISK------AWDNRYGVLMILELLESLKDQ---E---L 198 (350)
T ss_pred cCCC-CCCEEE-ECCCe------EEEcCC----------CEEEEe------ccccHHHHHHHHHHHHHhhhc---C---C
Confidence 2211 112221 11000 000000 001222 222233444455555555432 1 1
Q ss_pred CCcEEEEEEEe------CC-CccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCC
Q 011730 305 DSQVVSVTYFN------GG-DHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPP 377 (478)
Q Consensus 305 ~~~~~~v~~i~------gG-~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~ 377 (478)
...++-+..++ |. .+.+.++....+.+|+=...+.... .. . +.|-...+...+ . .
T Consensus 199 ~~~l~~~~tvqEEvG~rGA~~aa~~i~pD~aI~vDv~~~~d~~~~--~~-----~-----~lg~Gp~i~~~D---~---~ 260 (350)
T TIGR03107 199 PNTLIAGANVQEEVGLRGAHVSTTKFNPDIFFAVDCSPAGDIYGD--QG-----G-----KLGEGTLLRFFD---P---G 260 (350)
T ss_pred CceEEEEEEChhhcCchhhhhHHhhCCCCEEEEEecCCcCCCCCC--Cc-----c-----ccCCCceEEEec---C---C
Confidence 11222222222 22 3456666667888887554321110 01 0 123344454432 1 1
Q ss_pred ccCCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHH--HHH-hcccceEEecccCCCCCCCCCCCCCCcccCcCchHH
Q 011730 378 TVNDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSF--YSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPV 454 (478)
Q Consensus 378 ~~~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~--~~~-~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~ 454 (478)
...++.+.+.+.+++++ .|.+.. .....++||++. ++. ++|++...++.. ..|++.|.++++++..
T Consensus 261 ~i~~~~l~~~l~~~A~~-~~I~~Q--~~~~~gGtDa~~~~~~~~Gvpt~~i~ip~R--------y~Hs~~e~i~~~D~~~ 329 (350)
T TIGR03107 261 HIMLPRMKDFLLTTAEE-AGIKYQ--YYVAKGGTDAGAAHLKNSGVPSTTIGVCAR--------YIHSHQTLYSIDDFLA 329 (350)
T ss_pred CCCCHHHHHHHHHHHHH-cCCCcE--EecCCCCchHHHHHHhCCCCcEEEEccCcc--------cccChhheeeHHHHHH
Confidence 23578899999999998 477643 244457999994 443 599987655543 4999999999999999
Q ss_pred HHHHHHHHHHHH
Q 011730 455 GAAVHATIAERF 466 (478)
Q Consensus 455 ~~~i~a~~~~~l 466 (478)
+++++..++.++
T Consensus 330 ~~~Ll~~~i~~l 341 (350)
T TIGR03107 330 AQAFLQAIVKKL 341 (350)
T ss_pred HHHHHHHHHHhc
Confidence 999999998765
No 71
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=99.05 E-value=6.5e-09 Score=103.81 Aligned_cols=122 Identities=17% Similarity=0.207 Sum_probs=86.8
Q ss_pred HHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEecc-------------------CCceEEEEEcCCCCcEEEEEEc
Q 011730 101 KSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL-------------------AKTGIRAWVGTGGPPFVALRAD 161 (478)
Q Consensus 101 ~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~-------------------~~~~via~~g~~~~p~v~~~aH 161 (478)
..+...+-.-+.-|..|.++++||.++|+++|++++... .+.|||+.+.+...+.|++.||
T Consensus 38 ~~ia~~~~gR~~gS~~E~~aA~yL~~~f~~lG~~v~~q~f~~~~~~~~~~g~~~~~~~~g~nVIa~~~G~~~~~Ill~AH 117 (346)
T PRK10199 38 RHIATFFPGRMTGSPAEMLSADYLRQQFQQMGYQSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKAPQQIIIMAH 117 (346)
T ss_pred HHHHHhcCCCCCCCHHHHHHHHHHHHHHHHCCCceEeeeccccceeecccccccccCCccceEEEEECCCCCCeEEEEEE
Confidence 333334555566678899999999999999999875310 1257999985444688999999
Q ss_pred cccccCCCCCCCCcccccCCeEEeCcch---HHHHHHHHHHHHHHhcCCCCC------CCccCC-CcHHHHHHc
Q 011730 162 MDALPIQEAVEWEYKSKVAGKMHACGHD---AHVAMLIGAAKILKSREHLLK------PAEEAG-NGAKRMMAD 225 (478)
Q Consensus 162 lDvVP~~~~~~~Pf~~~~~G~~~g~G~d---g~~a~~l~aa~~L~~~~~~l~------~dEE~g-~G~~~l~~~ 225 (478)
+|||++.....+++.. +..++.|.+ ++++++|.+++.|++.+.+.. .+||.| .|++.+++.
T Consensus 118 ~DTV~p~~~~~~~~~~---~g~~~~GA~DnasGvA~lLe~ar~l~~~~~~~~I~fv~~~~EE~Gl~GS~~~~~~ 188 (346)
T PRK10199 118 LDTYAPQSDADVDANL---GGLTLQGMDDNAAGLGVMLELAERLKNVPTEYGIRFVATSGEEEGKLGAENLLKR 188 (346)
T ss_pred cCcCCCCCCCccccCC---CCcccCCccccHHHHHHHHHHHHHHhhCCCCCcEEEEEECCcccCcHHHHHHHHh
Confidence 9999743323333332 225667763 789999999999986653322 999987 599999876
No 72
>PRK09864 putative peptidase; Provisional
Probab=98.90 E-value=1.6e-08 Score=102.04 Aligned_cols=64 Identities=17% Similarity=0.171 Sum_probs=55.4
Q ss_pred HHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEeccCCceEEEEEcCCCCcEEEEEEcccccc
Q 011730 101 KSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALP 166 (478)
Q Consensus 101 ~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~g~~~~p~v~~~aHlDvVP 166 (478)
++++++|.++|++|+.|.++++++.++|+.++.+++.+ ...|+++..+ .++|+|+|.||||.|+
T Consensus 3 ~~~L~~L~~~~g~SG~E~~v~~~l~~~l~~~~dev~~D-~~GNli~~~g-~~~~kvml~AHmDevG 66 (356)
T PRK09864 3 IELLQQLCEASAVSGDEQEVRDILINTLEPCVNEITFD-GLGSFVARKG-NKGPKVAVVGHMDEVG 66 (356)
T ss_pred HHHHHHHHcCCCCCCchHHHHHHHHHHHHHhCCEEEEC-CCCCEEEEeC-CCCcEEEEEecccccC
Confidence 46789999999999999999999999999999998664 3458998864 3357999999999998
No 73
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=98.88 E-value=7.2e-08 Score=96.61 Aligned_cols=68 Identities=21% Similarity=0.197 Sum_probs=59.3
Q ss_pred HHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEeccCCceEEEEEcCCCC-cEEEEEEcccccc
Q 011730 98 DWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGP-PFVALRADMDALP 166 (478)
Q Consensus 98 ~~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~~~~~via~~g~~~~-p~v~~~aHlDvVP 166 (478)
+++++++++|.++|++|+.|.++.+++.++|++++.+++++ ...|++++.++..+ |.|++.+|||.|-
T Consensus 2 ~~~~~~LkeL~~~~gpsG~E~eVr~~~~~el~~~~~ev~~D-~lGnlia~~~g~~g~~~imi~AHmDEiG 70 (355)
T COG1363 2 EELLELLKELLEAPGPSGYEEEVRDVLKEELEPLGDEVEVD-RLGNLIAKKGGKNGPPKVMIAAHMDEIG 70 (355)
T ss_pred hHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHhCCceEEc-CCCcEEEEecCCCCCccEEEEeecceee
Confidence 46789999999999999999999999999999999998764 45689999866334 6699999999996
No 74
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.48 E-value=0.011 Score=65.04 Aligned_cols=125 Identities=18% Similarity=0.291 Sum_probs=78.2
Q ss_pred HHHHHHHHhhcC---CCCCc-chHHHHHHHHHHHHhCC---------CcE--Eec-------------cCCceEEEEEcC
Q 011730 99 WLKSVRRTIHQN---PELAF-QEFETSRLLRAELDRME---------IGY--KYP-------------LAKTGIRAWVGT 150 (478)
Q Consensus 99 ~l~~l~~~L~~i---Ps~s~-~E~~~a~~l~~~L~~~G---------~~v--~~~-------------~~~~~via~~g~ 150 (478)
+.++.+.++.++ |..|. +|..+.+++.+.+.+.. +++ +.. .+-.|++..+..
T Consensus 58 rA~~~l~~ls~~G~~~~gS~~ne~~a~~~il~e~~~i~~~~~~~~~~~Evd~q~~sg~~~~~~~~~~Y~~i~NIvVki~~ 137 (834)
T KOG2194|consen 58 RALKDLLSLSAAGPHPVGSDNNEMHASSFILKEVNKIRKGSQSDLYDMEVDLQSASGSFILEGMTLVYQNISNIVVKISP 137 (834)
T ss_pred HHHHHHHHHHhcCCcccCchhhHHHHHHHHHHHHHHHHhhhhcchhhheeceeeccceeeehhhhheeeeeeeEEEecCC
Confidence 344444555544 33343 45578888888776531 111 110 012578888854
Q ss_pred C--CCc-EEEEEEccccccCCCCCCCCcccccCCeEEeCcch-HHHHHHHHHHHHHHhcCCCCC--------CCccCC-C
Q 011730 151 G--GPP-FVALRADMDALPIQEAVEWEYKSKVAGKMHACGHD-AHVAMLIGAAKILKSREHLLK--------PAEEAG-N 217 (478)
Q Consensus 151 ~--~~p-~v~~~aHlDvVP~~~~~~~Pf~~~~~G~~~g~G~d-g~~a~~l~aa~~L~~~~~~l~--------~dEE~g-~ 217 (478)
+ ... .|++++|+|+||.+ +|-|+| ..+|.+|.+++.+.+....++ .+||.+ .
T Consensus 138 k~~~~~~~lLlnaHfDSvpt~---------------~gAtDDg~~va~mLe~lRv~s~~~~~l~~~vVFLfNgaEE~~L~ 202 (834)
T KOG2194|consen 138 KNGNDKNALLLNAHFDSVPTG---------------PGATDDGSGVASMLEALRVLSKSDKLLTHSVVFLFNGAEESGLL 202 (834)
T ss_pred CCCCccceeeeeccccccCCC---------------CCCCcchhHHHHHHHHHHHhhcCCCcccccEEEEecCcccchhh
Confidence 3 233 79999999999953 345555 457888999999988765443 888876 5
Q ss_pred cHHHHHHcCCC-CCCcEEEEEe
Q 011730 218 GAKRMMADGAL-EDVEAIFAVH 238 (478)
Q Consensus 218 G~~~l~~~g~~-~~~D~~i~~~ 238 (478)
|+..++.+..+ +.+.++|-.|
T Consensus 203 gsH~FItQH~w~~~~ka~INLe 224 (834)
T KOG2194|consen 203 GSHAFITQHPWSKNIKAVINLE 224 (834)
T ss_pred hcccceecChhhhhhheEEecc
Confidence 77777764433 3466777665
No 75
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=94.43 E-value=0.041 Score=50.08 Aligned_cols=73 Identities=25% Similarity=0.440 Sum_probs=47.0
Q ss_pred EEEEEEccccccCCCCCCCCcccccCCeEEeCcc--h-HHHHHHHHHHHHHHhcCCCCC--------CCccCC-CcHHHH
Q 011730 155 FVALRADMDALPIQEAVEWEYKSKVAGKMHACGH--D-AHVAMLIGAAKILKSREHLLK--------PAEEAG-NGAKRM 222 (478)
Q Consensus 155 ~v~~~aHlDvVP~~~~~~~Pf~~~~~G~~~g~G~--d-g~~a~~l~aa~~L~~~~~~l~--------~dEE~g-~G~~~l 222 (478)
.|++.||+|+++ +... + .+..|+ + .+++++|..|+.|++.+.+++ .+||.+ .|++.+
T Consensus 2 ~ivi~aH~Ds~~-~~~~---------~-~~~~GA~DnasGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~gl~GS~~~ 70 (179)
T PF04389_consen 2 YIVIGAHYDSVG-GDAD---------G-SWSPGANDNASGVAALLELARVLKELKPQPKRTIRFVFFDGEEQGLLGSRAF 70 (179)
T ss_dssp EEEEEEE--BES-CCC----------T-CSSS-TTTTHHHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGTSHHHHHH
T ss_pred EEEEEeecCCCC-CcCC---------C-cccCCcccchHHHHHHHHHHHHHHHhhcccCccEEEEEecccccCccchHHH
Confidence 589999999998 2111 1 123444 3 678889999999998654443 889977 499988
Q ss_pred HHc--CCCCCCcEEEEEe
Q 011730 223 MAD--GALEDVEAIFAVH 238 (478)
Q Consensus 223 ~~~--g~~~~~D~~i~~~ 238 (478)
++. ....++.++|.++
T Consensus 71 ~~~~~~~~~~~~~~inlD 88 (179)
T PF04389_consen 71 VEHDHEELDNIAAVINLD 88 (179)
T ss_dssp HHHHHCHHHHEEEEEEEC
T ss_pred HHhhhcccccceeEEecc
Confidence 863 2223456677666
No 76
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=92.29 E-value=2.3 Score=41.30 Aligned_cols=108 Identities=14% Similarity=0.119 Sum_probs=69.9
Q ss_pred HHHHHhcCcchHHHHHHHHHHhh--cCCCCCcchHHHHHHHHHHHHhCCCcEEecc-------C---CceEEEEEcCCCC
Q 011730 86 EVMELARRPETVDWLKSVRRTIH--QNPELAFQEFETSRLLRAELDRMEIGYKYPL-------A---KTGIRAWVGTGGP 153 (478)
Q Consensus 86 ~~~~~~~~~~~~~~l~~l~~~L~--~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~-------~---~~~via~~g~~~~ 153 (478)
..++.+.-+....++++.++-|. ++|. |..-..+.+||.+.|+.+||.|+.+. + =.|+++++.....
T Consensus 39 ~~lr~i~~~s~~~~~~~~L~p~lv~Rvpg-s~g~~~vr~~i~~~l~~l~w~ve~~~f~~~tp~g~~~f~nii~tl~~~A~ 117 (338)
T KOG3946|consen 39 SRLRAINPDSDWNRLWENLLPILVPRVPG-SPGSRQVRRFIIQHLRNLGWAVETDAFTDNTPLGTRNFNNLIATLDPNAS 117 (338)
T ss_pred HHHHHhcCCCCHHHHHHhhhhhhccccCC-CCccHHHHHHHHHHHHhcCceeeeccccccCcceeeeeeeEEEecCCCcc
Confidence 33333332344567777755543 4443 34557789999999999999987531 1 1478888865545
Q ss_pred cEEEEEEccccccCCCCCCCCcccccCCe-EEeCcchHHHHHHHHHHHHHHhc
Q 011730 154 PFVALRADMDALPIQEAVEWEYKSKVAGK-MHACGHDAHVAMLIGAAKILKSR 205 (478)
Q Consensus 154 p~v~~~aHlDvVP~~~~~~~Pf~~~~~G~-~~g~G~dg~~a~~l~aa~~L~~~ 205 (478)
..+++.+|||.--... |. +.+-|....+|+++..+++|.+.
T Consensus 118 r~lVlachydsk~~p~-----------~~~vgatdsAvpcamll~laq~l~~~ 159 (338)
T KOG3946|consen 118 RYLVLACHYDSKIFPG-----------GMFVGATDSAVPCAMLLNLAQALDKI 159 (338)
T ss_pred hheeeecccccccCCC-----------cceEeeccccccHHHHHHHHHHHHHH
Confidence 6788999999874322 22 22333346788888888887754
No 77
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=91.60 E-value=0.65 Score=46.04 Aligned_cols=44 Identities=25% Similarity=0.213 Sum_probs=34.7
Q ss_pred CCccchHHHHHH---hcccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHHH
Q 011730 407 MMGAEDFSFYSE---VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAV 458 (478)
Q Consensus 407 ~~g~tD~~~~~~---~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~i 458 (478)
..++||++.+.. .+|++...++.. ..|+|.|.++++++..++++
T Consensus 246 ~~ggTDa~~~~~~~~Gi~t~~i~iP~r--------y~Hs~~e~~~~~Di~~~~~L 292 (292)
T PF05343_consen 246 SGGGTDAGAIQLSGGGIPTAVISIPCR--------YMHSPVEVIDLDDIEATIDL 292 (292)
T ss_dssp SSSSSTHHHHHTSTTSSEEEEEEEEEB--------STTSTTEEEEHHHHHHHHHH
T ss_pred CCcccHHHHHHHcCCCCCEEEEecccc--------cCCCcceEEEHHHHHHHhhC
Confidence 357888888864 478887666654 49999999999999988764
No 78
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=88.27 E-value=0.45 Score=47.21 Aligned_cols=24 Identities=29% Similarity=0.340 Sum_probs=16.3
Q ss_pred eEEEEEcC-CCCcEEEEEEcccccc
Q 011730 143 GIRAWVGT-GGPPFVALRADMDALP 166 (478)
Q Consensus 143 ~via~~g~-~~~p~v~~~aHlDvVP 166 (478)
|+++++++ ..+|+|+|.+|||-|-
T Consensus 2 nvi~~~~g~~~~~~vmi~AHmDEiG 26 (292)
T PF05343_consen 2 NVIARKKGKEGGPKVMIAAHMDEIG 26 (292)
T ss_dssp -EEEEECSSCSSSEEEEEEE--B-E
T ss_pred cEEEEECCCCCCceEEEEEccceee
Confidence 78999866 3479999999999985
No 79
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=82.76 E-value=2.1 Score=45.57 Aligned_cols=44 Identities=9% Similarity=0.071 Sum_probs=39.4
Q ss_pred CCcEEEEEEEeCCCccceecCcEEEEEEEeccChHhHHHHHHHHHHHHHH
Q 011730 305 DSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVIVE 354 (478)
Q Consensus 305 ~~~~~~v~~i~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~ 354 (478)
...++|+|++.++ |++|.+++++|++++++.+++.+.+++.++.
T Consensus 336 ~~~t~n~g~i~~~------~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~ 379 (477)
T TIGR01893 336 VESSLNLGVVKTK------ENKVIFTFLIRSSVESDKDYVTEKIESIAKL 379 (477)
T ss_pred EEeeeeEEEEEEc------CCEEEEEEEeCCCCchhHHHHHHHHHHHhhh
Confidence 3567888998876 7899999999999999999999999999885
No 80
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=69.73 E-value=12 Score=39.15 Aligned_cols=59 Identities=25% Similarity=0.334 Sum_probs=40.7
Q ss_pred CcEEEEEEccccccCCCCCCCCcccccCCeEEeCcch-HHHHHHHHHHHHHHhcCCCCC------CCccCC-CcHHHHHH
Q 011730 153 PPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHD-AHVAMLIGAAKILKSREHLLK------PAEEAG-NGAKRMMA 224 (478)
Q Consensus 153 ~p~v~~~aHlDvVP~~~~~~~Pf~~~~~G~~~g~G~d-g~~a~~l~aa~~L~~~~~~l~------~dEE~g-~G~~~l~~ 224 (478)
.+.+++.+|+|.+|.+ .|.-.| .+++++|.+++.|+....+.. ..||.| .|+..++.
T Consensus 208 ~~~~~~~a~~~s~~~~---------------~GA~DNasGva~llEiAr~l~~~~p~~~v~f~~~~aEE~Gl~GS~~~~~ 272 (435)
T COG2234 208 DSLGLLGAHIDSVPTG---------------PGADDNASGVAALLELARVLKGNPPKRTVRFVAFGAEESGLLGSEAYVK 272 (435)
T ss_pred CceeeecccccCCcCC---------------CCcccccHHHHHHHHHHHHHhcCCCCceEEEEEecchhhcccccHHHHh
Confidence 4667777888877632 122223 678889999999998764322 788876 68888877
Q ss_pred cC
Q 011730 225 DG 226 (478)
Q Consensus 225 ~g 226 (478)
.-
T Consensus 273 ~~ 274 (435)
T COG2234 273 RL 274 (435)
T ss_pred cC
Confidence 63
No 81
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=69.38 E-value=11 Score=40.04 Aligned_cols=77 Identities=9% Similarity=-0.182 Sum_probs=56.6
Q ss_pred CCHHHHHHHHHHHHHhcCCCccc--ccCCCCccchHHHHHH---hcccceEEecccCCCCCCCCCCCCCCcccCcCchHH
Q 011730 380 NDEDMYEHVKKVAIDLLGPMNYR--VVPPMMGAEDFSFYSE---VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPV 454 (478)
Q Consensus 380 ~d~~l~~~~~~~~~~~~G~~~~~--~~~~~~g~tD~~~~~~---~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~ 454 (478)
.|......+++++++. |.+-.. .....++|+|.+.+.. ++|++.++++. .-.|++-|.++.+++..
T Consensus 373 td~~~~a~i~~la~~~-~Ip~Q~~~~~~d~~~GsTig~i~~s~~Gi~tvDiGiP~--------l~MHS~rE~~~~~D~~~ 443 (465)
T PTZ00371 373 TNGVTASLLKAIAKKA-NIPIQEFVVKNDSPCGSTIGPILSSNLGIRTVDIGIPQ--------LAMHSIREMCGVVDIYY 443 (465)
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCcchHHHHHHhCCCCcEEEechhh--------cccccHHHHccHHHHHH
Confidence 4788899999999884 664321 1234556888888754 37877644333 34999999999999999
Q ss_pred HHHHHHHHHHH
Q 011730 455 GAAVHATIAER 465 (478)
Q Consensus 455 ~~~i~a~~~~~ 465 (478)
.++++..++..
T Consensus 444 ~~~l~~af~~~ 454 (465)
T PTZ00371 444 LVKLIKAFFTN 454 (465)
T ss_pred HHHHHHHHHHh
Confidence 99999888764
No 82
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and manganese-dependent exopeptidases ( EC 3.4.11.1), including leucine aminopeptidase. They catalyze removal of amino acids from the N-terminus of a protein and play a key role in protein degradation and in the metabolism of biologically active peptides. They do not contain HEXXH motif (which is used as one of the signature patterns to group the peptidase families) in the metal-binding site. The two associated zinc ions and the active site are entirely enclosed within the C-terminal catalytic domain in leucine aminopeptidase. The enzyme is a hexamer, with the catalytic domains clustered around the three-fold axis, and the two trimers related to one another by a two-fold rotation. The N-terminal domain is structurally similar to the ADP-ribose binding Macro domain. This family includes proteins from bacteria, archaea, animals and plants.
Probab=66.98 E-value=1.4e+02 Score=31.84 Aligned_cols=109 Identities=10% Similarity=-0.012 Sum_probs=67.3
Q ss_pred hHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEecc------CCc-eEEEEE-cCCCCcEEEEEEccccccC
Q 011730 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL------AKT-GIRAWV-GTGGPPFVALRADMDALPI 167 (478)
Q Consensus 96 ~~~~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~------~~~-~via~~-g~~~~p~v~~~aHlDvVP~ 167 (478)
...+-+.+.|+|.+.|.--..-...++++.+.+++.|++|+... -+. ++++.= |+...|.++...+...-+
T Consensus 152 ~~a~~~~~aRdL~n~P~n~~tP~~~a~~a~~l~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~p~lv~l~Y~g~~~- 230 (468)
T cd00433 152 AIAEGVNLARDLVNTPANDLTPTYLAEEAKELAKELGVKVEVLDEKELEELGMGALLAVGKGSEEPPRLIVLEYKGKGA- 230 (468)
T ss_pred HHHHHHHHHHHhhcCCcccCCHHHHHHHHHHHHHhcCCEEEEEcHHHHHhCCCCceeeecccCCCCCEEEEEEECCCCC-
Confidence 46678899999999997556667788999999999999987632 133 355542 333356666555543221
Q ss_pred CCCCCCCcccccCCeEE---------------eCcchHHHHHHHHHHHHHHhcCCC
Q 011730 168 QEAVEWEYKSKVAGKMH---------------ACGHDAHVAMLIGAAKILKSREHL 208 (478)
Q Consensus 168 ~~~~~~Pf~~~~~G~~~---------------g~G~dg~~a~~l~aa~~L~~~~~~ 208 (478)
...|...+-+|+-| .+.+-+++|+++++++++.+.+.+
T Consensus 231 ---~~~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlga~~aia~l~~~ 283 (468)
T cd00433 231 ---SKKPIALVGKGITFDTGGLSLKPAAGMDGMKYDMGGAAAVLGAMKAIAELKLP 283 (468)
T ss_pred ---CCCcEEEEcCceEecCCCccccCccChhhccccchhHHHHHHHHHHHHHcCCC
Confidence 12222222122211 111127888899999999887643
No 83
>PRK02256 putative aminopeptidase 1; Provisional
Probab=65.59 E-value=8.7 Score=40.61 Aligned_cols=76 Identities=9% Similarity=0.017 Sum_probs=53.9
Q ss_pred CCHHHHHHHHHHHHHhcCCCcccccC----CCCccchHHHHHH-hcccceEEecccCCCCCCCCCCCCCCcccCcCchHH
Q 011730 380 NDEDMYEHVKKVAIDLLGPMNYRVVP----PMMGAEDFSFYSE-VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPV 454 (478)
Q Consensus 380 ~d~~l~~~~~~~~~~~~G~~~~~~~~----~~~g~tD~~~~~~-~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~ 454 (478)
.+..++..+++++++. |.+-..... ...|+||...+++ ++|++..+++. .-.|++-|.++.+++..
T Consensus 380 ~~~~~~~~i~~iA~~~-~Ip~Q~~~~~r~d~~~GgTig~~~s~~Gi~tvdiGiP~--------l~MHS~rE~~~~~D~~~ 450 (462)
T PRK02256 380 ANAEFVAEVRNLFNKN-NVVWQTAELGKVDQGGGGTIAKFLANYGMEVIDCGVAL--------LSMHSPFEIASKADIYE 450 (462)
T ss_pred CCHHHHHHHHHHHHHc-CCCEEEEEeecCCCCCcChHHHHHcCCCCcEEEechhh--------hccccHHHHhhHHHHHH
Confidence 4778888899998874 664321111 2257999666664 48887644333 34999999999999999
Q ss_pred HHHHHHHHHH
Q 011730 455 GAAVHATIAE 464 (478)
Q Consensus 455 ~~~i~a~~~~ 464 (478)
+++++..++.
T Consensus 451 ~~~ll~~f~~ 460 (462)
T PRK02256 451 TYKAYKAFLE 460 (462)
T ss_pred HHHHHHHHHh
Confidence 9999987753
No 84
>PRK02813 putative aminopeptidase 2; Provisional
Probab=63.73 E-value=12 Score=39.15 Aligned_cols=75 Identities=8% Similarity=-0.120 Sum_probs=54.1
Q ss_pred CCHHHHHHHHHHHHHhcCCCccc--ccCCCCccchHHHHHH---hcccceEEecccCCCCCCCCCCCCCCcccCcCchHH
Q 011730 380 NDEDMYEHVKKVAIDLLGPMNYR--VVPPMMGAEDFSFYSE---VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPV 454 (478)
Q Consensus 380 ~d~~l~~~~~~~~~~~~G~~~~~--~~~~~~g~tD~~~~~~---~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~ 454 (478)
.|......+++++++. |.+-.. ....+++|+|.+.+.. ++|++..+++. ...|++-|.++.+++..
T Consensus 346 t~~~~~a~~~~ia~~~-~Ip~Q~~v~~~d~~gGstig~i~~s~~Gi~tvdiGiP~--------l~MHS~~E~~~~~D~~~ 416 (428)
T PRK02813 346 TDAESAAVFKLLCEKA-GVPYQEFVNRSDMPCGSTIGPITAARLGIRTVDVGAPM--------LAMHSARELAGVKDHAY 416 (428)
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCccHHHHHHHhCCCCcEEEeChhh--------cccccHHHHccHHHHHH
Confidence 4777888888888874 654321 1123357999998864 37877644333 34999999999999999
Q ss_pred HHHHHHHHH
Q 011730 455 GAAVHATIA 463 (478)
Q Consensus 455 ~~~i~a~~~ 463 (478)
.++++..++
T Consensus 417 ~~~l~~~f~ 425 (428)
T PRK02813 417 LIKALTAFF 425 (428)
T ss_pred HHHHHHHHh
Confidence 999988764
No 85
>PRK00913 multifunctional aminopeptidase A; Provisional
Probab=57.95 E-value=2e+02 Score=30.75 Aligned_cols=111 Identities=10% Similarity=0.039 Sum_probs=65.1
Q ss_pred hHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEecc------CCc-eEEEEE-cCCCCcEEEEEEccc----
Q 011730 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL------AKT-GIRAWV-GTGGPPFVALRADMD---- 163 (478)
Q Consensus 96 ~~~~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~------~~~-~via~~-g~~~~p~v~~~aHlD---- 163 (478)
...+-+.+.|+|.+.|.---.-...++++.+.+++.|++++... .+. ++++.= |+...|.++...+--
T Consensus 169 ~~a~~~~~aRdL~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~prli~l~Y~g~~~~ 248 (483)
T PRK00913 169 AIAEGVNLARDLVNEPPNILTPAYLAERAKELAKEYGLEVEVLDEKEMEKLGMGALLAVGQGSANPPRLIVLEYKGGKKP 248 (483)
T ss_pred HHHHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHhcCCEEEEEeHHHHHhCCCCcEEEEeccCCCCCeEEEEEECCCCCe
Confidence 46678899999999997555566778899999999999987532 233 455542 333346665554431
Q ss_pred cccCCCCCCCCccc----ccC--CeEEeCcchHHHHHHHHHHHHHHhcCCC
Q 011730 164 ALPIQEAVEWEYKS----KVA--GKMHACGHDAHVAMLIGAAKILKSREHL 208 (478)
Q Consensus 164 vVP~~~~~~~Pf~~----~~~--G~~~g~G~dg~~a~~l~aa~~L~~~~~~ 208 (478)
++-+|.. ..|.+ .+. +.-..+.+-+++|+++++++++.+.+.+
T Consensus 249 i~LVGKG--ITFDsGG~slKp~~~M~~MK~DM~GAAaVlga~~aia~lkl~ 297 (483)
T PRK00913 249 IALVGKG--LTFDSGGISLKPAAGMDEMKYDMGGAAAVLGTMRALAELKLP 297 (483)
T ss_pred EEEEcCc--eEecCCCccCCCCcChhhcccccHhHHHHHHHHHHHHHcCCC
Confidence 1111211 11110 011 1111122227888899999999887644
No 86
>PTZ00412 leucyl aminopeptidase; Provisional
Probab=54.85 E-value=1.5e+02 Score=32.15 Aligned_cols=109 Identities=10% Similarity=-0.028 Sum_probs=63.8
Q ss_pred hHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEE-ecc------CC-ceEEEEE-cCCCCcEEEEEEcccccc
Q 011730 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYK-YPL------AK-TGIRAWV-GTGGPPFVALRADMDALP 166 (478)
Q Consensus 96 ~~~~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~-~~~------~~-~~via~~-g~~~~p~v~~~aHlDvVP 166 (478)
...+-+.+.|+|.+-|.--..-...++.+.+.+.+.|++++ ... .+ .++++.= |+...|.++...+. |
T Consensus 210 ~ia~~vn~ARdLvn~P~N~ltP~~~Ae~a~~~~~~~g~~v~~Vl~~~~l~~~gmg~llaVgkGS~~pPrli~L~Y~---g 286 (569)
T PTZ00412 210 IIGHCVNEARNLGNLREDEGVPQFYAEWIKKELAPLGIKVRKVLRGEQLEGAGLNLMYNVGKGSRHEPYLVVFEYI---G 286 (569)
T ss_pred HHHHHHHHHHHhccCChhhcCHHHHHHHHHHHHhhcCCEEEEEEcHHHHHHCCCcceeeeeccCCCCCEEEEEEeC---C
Confidence 46678899999999997555556678888888888999885 321 12 3455543 33334555554442 2
Q ss_pred CCCCCCCCcccccCCeEE---------------eCcchHHHHHHHHHHHHHHhcCCC
Q 011730 167 IQEAVEWEYKSKVAGKMH---------------ACGHDAHVAMLIGAAKILKSREHL 208 (478)
Q Consensus 167 ~~~~~~~Pf~~~~~G~~~---------------g~G~dg~~a~~l~aa~~L~~~~~~ 208 (478)
.+ ....|...+-+|+-| ..++-+++|+++++++++.+.+.+
T Consensus 287 ~~-~~~~~iaLVGKGITFDSGGisLKP~~~M~~MK~DMgGAAaVlga~~AiA~Lklp 342 (569)
T PTZ00412 287 NP-RSSAATALVGKGVTFDCGGLNIKPYGSMETMHSDMMGAATVMCTLKAIAKLQLP 342 (569)
T ss_pred CC-CCCCcEEEEcCceEEcCCCCCCCCccChhhhhccchhHHHHHHHHHHHHHcCCC
Confidence 11 112233222222222 122227888889999988877644
No 87
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=51.68 E-value=40 Score=34.36 Aligned_cols=58 Identities=26% Similarity=0.272 Sum_probs=40.3
Q ss_pred CeEEeCcch--HHHHHHHHHHHHHHhcCCCC------CCCccCC-CcHHHHHHcCCCCCCcEEEEEecCC
Q 011730 181 GKMHACGHD--AHVAMLIGAAKILKSREHLL------KPAEEAG-NGAKRMMADGALEDVEAIFAVHVSH 241 (478)
Q Consensus 181 G~~~g~G~d--g~~a~~l~aa~~L~~~~~~l------~~dEE~g-~G~~~l~~~g~~~~~D~~i~~~~~~ 241 (478)
+++.|+.-| .++++++.+++.+++..... .+.||.| .|++..... + ++|.+|+.+.+.
T Consensus 170 ~~i~~kalDdR~g~a~l~e~l~~l~~~~~~~~l~~~~tvqEEvG~rGA~~aa~~-i--~pD~aI~vDv~~ 236 (350)
T TIGR03107 170 KNVISKAWDNRYGVLMILELLESLKDQELPNTLIAGANVQEEVGLRGAHVSTTK-F--NPDIFFAVDCSP 236 (350)
T ss_pred CEEEEeccccHHHHHHHHHHHHHhhhcCCCceEEEEEEChhhcCchhhhhHHhh-C--CCCEEEEEecCC
Confidence 445566654 78888889999998653322 2899988 587755433 2 589999998654
No 88
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=50.23 E-value=75 Score=33.03 Aligned_cols=84 Identities=19% Similarity=0.279 Sum_probs=48.8
Q ss_pred ceEEEEEcCC--------CCcEEEEEEccccccCCCCCCCCcccccCCeEEeCcch---HHHHHHHHHHHHHHhcCC---
Q 011730 142 TGIRAWVGTG--------GPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHD---AHVAMLIGAAKILKSREH--- 207 (478)
Q Consensus 142 ~~via~~g~~--------~~p~v~~~aHlDvVP~~~~~~~Pf~~~~~G~~~g~G~d---g~~a~~l~aa~~L~~~~~--- 207 (478)
.|+.+++.+| .-|+|++.+||||--+-. | +..|+| .++.++|..++.+.+...
T Consensus 194 ~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap-----------~--lsvgADSNGSGvvaLLelarlfSkly~yps 260 (555)
T KOG2526|consen 194 LNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAP-----------G--LSVGADSNGSGVVALLELARLFSKLYDYPS 260 (555)
T ss_pred ceEEeecccccccccccccCCeEEEEEeccccccCC-----------C--CCCCCCCCCccHHHHHHHHHHHHHHhcCcc
Confidence 5788887421 249999999999986422 1 333443 356567788887776532
Q ss_pred ---CCC-----CC--ccCCCcHHHHHHc---CCCCCCcEEEEEe
Q 011730 208 ---LLK-----PA--EEAGNGAKRMMAD---GALEDVEAIFAVH 238 (478)
Q Consensus 208 ---~l~-----~d--EE~g~G~~~l~~~---g~~~~~D~~i~~~ 238 (478)
+.+ .+ -=.-.|.+..++- .+-+.+|++|+.+
T Consensus 261 TrakYnLlF~lt~aG~lNyqGTkkWLe~dd~~lq~nVdfaiCLd 304 (555)
T KOG2526|consen 261 TRAKYNLLFILTAAGKLNYQGTKKWLEFDDADLQKNVDFAICLD 304 (555)
T ss_pred cccceeEEEEEccCccccccchhhhhhcchHHHHhcccEEEEhh
Confidence 111 11 1111366665552 1123689999876
No 89
>PRK05015 aminopeptidase B; Provisional
Probab=47.64 E-value=2.5e+02 Score=29.32 Aligned_cols=41 Identities=7% Similarity=0.011 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhC---CCcEEe
Q 011730 97 VDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRM---EIGYKY 137 (478)
Q Consensus 97 ~~~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~---G~~v~~ 137 (478)
+-+...+.|+|++.|.---.-...++...++++++ +++++.
T Consensus 99 ~~~~~~~aRdLvn~P~n~ltP~~lA~~a~~~~~~~~~~~v~v~V 142 (424)
T PRK05015 99 RLKIIDWVRDTINAPAEELGPEQLAQRAADLICSVAGDAVSYRI 142 (424)
T ss_pred HHHHHHHHHHHhcCCcccCCHHHHHHHHHHHHHhhccCceEEEE
Confidence 33568899999999975555556677777777776 576664
No 90
>PRK09961 exoaminopeptidase; Provisional
Probab=45.46 E-value=61 Score=32.89 Aligned_cols=77 Identities=14% Similarity=0.069 Sum_probs=55.7
Q ss_pred CCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHH---hcccceEEecccCCCCCCCCCCCCCCcccCcCchHHHH
Q 011730 380 NDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE---VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGA 456 (478)
Q Consensus 380 ~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~---~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~ 456 (478)
.|+.+++.+++++++. +.+.. ......++||++.+.. .+|++.+.+|. ...|+++|+++++++..++
T Consensus 254 ~~~~l~~~l~~~A~~~-~Ip~Q-~~~~~ggGTDa~~~~~~~~Giptv~ig~p~--------ry~Hs~~E~v~~~D~~~~~ 323 (344)
T PRK09961 254 APPKLTAWIETVAAEI-GIPLQ-ADMFSNGGTDGGAVHLTGTGVPTVVMGPAT--------RHGHCAASIADCRDILQMI 323 (344)
T ss_pred CCHHHHHHHHHHHHHc-CCCcE-EEecCCCcchHHHHHHhCCCCCEEEechhh--------hcccChhheEEHHHHHHHH
Confidence 4677888888888773 54432 1122346899997754 48988754442 2599999999999999999
Q ss_pred HHHHHHHHHH
Q 011730 457 AVHATIAERF 466 (478)
Q Consensus 457 ~i~a~~~~~l 466 (478)
+++..++..+
T Consensus 324 ~Ll~~~i~~l 333 (344)
T PRK09961 324 QLLSALIQRL 333 (344)
T ss_pred HHHHHHHHHc
Confidence 9999998554
No 91
>PRK06156 hypothetical protein; Provisional
Probab=39.23 E-value=1.7e+02 Score=31.40 Aligned_cols=25 Identities=20% Similarity=0.329 Sum_probs=21.2
Q ss_pred EEEEEEEeCCCccceecCcEEEEEE
Q 011730 308 VVSVTYFNGGDHLDMIPDAVVIGGT 332 (478)
Q Consensus 308 ~~~v~~i~gG~~~NvIP~~a~~~~d 332 (478)
..++..++||...|+||+.|.+.+.
T Consensus 240 ~~~l~~~~gG~~~n~ip~~a~~~~~ 264 (520)
T PRK06156 240 GAEIVAMTGGAFANQIPQTAVATLS 264 (520)
T ss_pred ceeEEEEEcCCcCCCCCCccEEEEe
Confidence 4567788999999999999998843
No 92
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M17 (leucyl aminopeptidase family, clan MF), the type example being leucyl aminopeptidase from Bos taurus (Bovine). Aminopeptidases are exopeptidases involved in the processing and regular turnover of intracellular proteins, although their precise role in cellular metabolism is unclear [, ]. Leucine aminopeptidases cleave leucine residues from the N-terminal of polypeptide chains, but substantial rates are evident for all amino acids []. The enzymes exist as homo-hexamers, comprising 2 trimers stacked on top of one another []. Each monomer binds 2 zinc ions and folds into 2 alpha/beta-type quasi-spherical globular domains, producing a comma-like shape []. The N-terminal 150 residues form a 5-stranded beta-sheet with 4 parallel and 1 anti-parallel strand sandwiched between 4 alpha-helices []. An alpha-helix extends into the C-terminal domain, which comprises a central 8-stranded saddle-shaped beta-sheet sandwiched between groups of helices, forming the monomer hydrophobic core []. A 3-stranded beta-sheet resides on the surface of the monomer, where it interacts with other members of the hexamer []. The 2 zinc ions and the active site are entirely located in the C-terminal catalytic domain [].; GO: 0004177 aminopeptidase activity, 0006508 proteolysis, 0005622 intracellular; PDB: 3KZW_L 3KQX_C 3KQZ_L 3KR4_I 3KR5_J 3T8W_C 3H8F_D 3H8G_A 3H8E_B 3IJ3_A ....
Probab=37.93 E-value=44 Score=33.40 Aligned_cols=37 Identities=5% Similarity=0.073 Sum_probs=30.1
Q ss_pred HHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEe
Q 011730 101 KSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKY 137 (478)
Q Consensus 101 ~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~ 137 (478)
+.+.|+|.+.|.---.-...++++.+.++++|++|+.
T Consensus 1 vn~aRdL~n~P~n~~~P~~~a~~~~~~~~~~~v~v~v 37 (311)
T PF00883_consen 1 VNLARDLVNTPPNILTPETFAEYAKELAKKYGVKVEV 37 (311)
T ss_dssp HHHHHHHHHS-TTTSSHHHHHHHHHHHHHHCTEEEEE
T ss_pred ChHHHhhhCCChhhcCHHHHHHHHHHHHhhcCCEEEE
Confidence 3578899999876667778899999999999998775
No 93
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=37.76 E-value=68 Score=30.67 Aligned_cols=59 Identities=25% Similarity=0.341 Sum_probs=38.1
Q ss_pred cEEEEEEccccccCCCCCCCCcccccCCeEEeCcch---HHHHHHHHHHHHHHhcCC---CCC--------CCccCC-Cc
Q 011730 154 PFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHD---AHVAMLIGAAKILKSREH---LLK--------PAEEAG-NG 218 (478)
Q Consensus 154 p~v~~~aHlDvVP~~~~~~~Pf~~~~~G~~~g~G~d---g~~a~~l~aa~~L~~~~~---~l~--------~dEE~g-~G 218 (478)
|.|++.+.||+.-.-. +. +.|++ .++.++|+++++|.+... .++ .+|--+ .|
T Consensus 1 ~iIlv~armDs~s~F~-----------~~--s~GA~s~~sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~dYiG 67 (234)
T PF05450_consen 1 PIILVVARMDSFSFFH-----------DL--SPGADSSVSGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESFDYIG 67 (234)
T ss_pred CEEEEEecccchhccc-----------CC--CCCcccchHHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccccccc
Confidence 6799999999885321 22 34543 567778899999986522 121 676655 47
Q ss_pred HHHHHHc
Q 011730 219 AKRMMAD 225 (478)
Q Consensus 219 ~~~l~~~ 225 (478)
+..|+.+
T Consensus 68 S~R~vyD 74 (234)
T PF05450_consen 68 SSRFVYD 74 (234)
T ss_pred hHHHHHH
Confidence 7766543
No 94
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=36.52 E-value=70 Score=32.64 Aligned_cols=77 Identities=17% Similarity=0.012 Sum_probs=53.2
Q ss_pred CHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHH---hcccceEEecccCCCCCCCCCCCCCCcccCcCchHHHHH
Q 011730 381 DEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE---VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAA 457 (478)
Q Consensus 381 d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~---~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~~ 457 (478)
++.+.+.+.+++++ .+.+... .....++||++.+.. .+|+..+.++. ...|+|.|.++++++..+.+
T Consensus 268 ~~~l~~~L~~~A~~-~~Ip~Q~-~v~~~ggTDA~a~~~~g~gvpta~Igip~--------ry~Hs~~e~~~~~D~~~~~~ 337 (355)
T COG1363 268 HPKLRKFLLELAEK-NNIPYQV-DVSPGGGTDAGAAHLTGGGVPTALIGIPT--------RYIHSPVEVAHLDDLEATVK 337 (355)
T ss_pred CHHHHHHHHHHHHH-cCCCeEE-EecCCCCccHHHHHHcCCCCceEEEeccc--------ccccCcceeecHHHHHHHHH
Confidence 44555555555555 2443321 122237888888765 38988755544 35999999999999999999
Q ss_pred HHHHHHHHHH
Q 011730 458 VHATIAERFL 467 (478)
Q Consensus 458 i~a~~~~~ll 467 (478)
++..++..+-
T Consensus 338 Ll~~~i~~~~ 347 (355)
T COG1363 338 LLVAYLESLD 347 (355)
T ss_pred HHHHHHHhcc
Confidence 9999987764
No 95
>KOG2597 consensus Predicted aminopeptidase of the M17 family [General function prediction only]
Probab=35.36 E-value=3.2e+02 Score=29.31 Aligned_cols=113 Identities=10% Similarity=-0.020 Sum_probs=66.0
Q ss_pred hHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhCCCcEEecc------CCceEEEEEc--CCCCcEEEEEEccccccC
Q 011730 96 TVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL------AKTGIRAWVG--TGGPPFVALRADMDALPI 167 (478)
Q Consensus 96 ~~~~l~~l~~~L~~iPs~s~~E~~~a~~l~~~L~~~G~~v~~~~------~~~~via~~g--~~~~p~v~~~aHlDvVP~ 167 (478)
...+-..+.|+|...|.---.-...++++.+++...|+.++... -..|.+.-.+ +...|.++...|..+=|.
T Consensus 187 ~~~~~~~lar~l~d~PaN~Mtp~~fae~a~~~~~~~~v~v~V~~~~~i~~~~~~~~l~V~k~s~~pP~ll~lsY~g~~~~ 266 (513)
T KOG2597|consen 187 FKAAAQNLARRLGDTPANRMTPTQFAEEAVDVLCPLGVTVEVRDEEWIEEQGMNSFLAVAKASCEPPRLLELSYKGTSGA 266 (513)
T ss_pred HHHHHHHHHHHhccCChhhcCHHHHHHHHHHhhcccCceEEEechHHHhhccccceeeeccccCCCCEEEEEEEcCCCCC
Confidence 45667778888888876444556789999999999998876532 1234333332 333577888888777553
Q ss_pred CCC-----CCCCccc----ccC-CeE-EeCcchHHHHHHHHHHHHHHhcCCC
Q 011730 168 QEA-----VEWEYKS----KVA-GKM-HACGHDAHVAMLIGAAKILKSREHL 208 (478)
Q Consensus 168 ~~~-----~~~Pf~~----~~~-G~~-~g~G~dg~~a~~l~aa~~L~~~~~~ 208 (478)
.+. ....|.. .+. +.+ ..|++-+++|+++++++++.+.+.+
T Consensus 267 ~~~i~lvGKGvtfDsGGl~iK~~~~M~~mr~dm~GAA~v~~~~~a~~~l~~~ 318 (513)
T KOG2597|consen 267 DKTILLVGKGVTFDSGGLSIKPKTGMDGMRRDMGGAAVVLGAFRAAAQLSLP 318 (513)
T ss_pred cceEEEEecceEEecCccccccCCChhhhhhhccccHHHHHHHHHHHhcCCC
Confidence 221 1111211 011 111 1233336777788888888776543
No 96
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=34.14 E-value=97 Score=34.65 Aligned_cols=68 Identities=22% Similarity=0.303 Sum_probs=43.5
Q ss_pred ceEEEEE-cCC-CCcEEEEEEccccccCCCCCCCCcccccCCeEEeCcchHHHHHHHHHHHHHHh---cCCCCC------
Q 011730 142 TGIRAWV-GTG-GPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKS---REHLLK------ 210 (478)
Q Consensus 142 ~~via~~-g~~-~~p~v~~~aHlDvVP~~~~~~~Pf~~~~~G~~~g~G~dg~~a~~l~aa~~L~~---~~~~l~------ 210 (478)
.|+++.+ |+. ++.-|++.+|.|..-.+. -..+.+++.++..++++.. .+.++.
T Consensus 339 ~NIig~I~Gs~epD~~ViigahrDSw~~Ga----------------~dp~sGta~Ll~i~~~~~~~~k~gwrP~RtI~F~ 402 (702)
T KOG2195|consen 339 QNIIGKIEGSEEPDRYVIIGAHRDSWTFGA----------------IDPNSGTALLLEIARALSKLKKRGWRPRRTILFA 402 (702)
T ss_pred eeEEEEEecCcCCCeEEEEeccccccccCC----------------cCCCccHHHHHHHHHHHHHHHHcCCCccceEEEE
Confidence 5899999 533 678999999999986321 1112346666666666554 333322
Q ss_pred --CCccCC-CcHHHHHHc
Q 011730 211 --PAEEAG-NGAKRMMAD 225 (478)
Q Consensus 211 --~dEE~g-~G~~~l~~~ 225 (478)
.+||.| -|+-.+++.
T Consensus 403 sWdAeEfGliGStE~~E~ 420 (702)
T KOG2195|consen 403 SWDAEEFGLLGSTEWAEE 420 (702)
T ss_pred EccchhccccccHHHHHH
Confidence 788876 587777664
No 97
>PRK09864 putative peptidase; Provisional
Probab=33.94 E-value=94 Score=31.78 Aligned_cols=77 Identities=13% Similarity=0.005 Sum_probs=57.4
Q ss_pred CCHHHHHHHHHHHHHhcCCCcccccCCCCccchHHHHHH---hcccceEEecccCCCCCCCCCCCCCCcccCcCchHHHH
Q 011730 380 NDEDMYEHVKKVAIDLLGPMNYRVVPPMMGAEDFSFYSE---VVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGA 456 (478)
Q Consensus 380 ~d~~l~~~~~~~~~~~~G~~~~~~~~~~~g~tD~~~~~~---~iP~~~~~~G~~~~~~~~~~~~H~~dE~i~~~~l~~~~ 456 (478)
.++.+.+.+.+++++ .|.+... .....++||++.+.. ++|++.+.++.. ..|+|.|.++++++..++
T Consensus 262 ~~~~l~~~l~~~A~~-~~Ip~Q~-~~~~~ggTDa~~i~~~~~Gvpt~~isiP~R--------Y~Hs~~e~~~~~D~e~~~ 331 (356)
T PRK09864 262 PNQKLVAALKSCAAH-NDLPLQF-STMKTGATDGGRYNVMGGGRPVVALCLPTR--------YLHANSGMISKADYDALL 331 (356)
T ss_pred CCHHHHHHHHHHHHH-cCCCceE-EEcCCCCchHHHHHHhCCCCcEEEEeeccC--------cCCCcceEeEHHHHHHHH
Confidence 356777777777777 3665331 123346899998764 489887655543 499999999999999999
Q ss_pred HHHHHHHHHH
Q 011730 457 AVHATIAERF 466 (478)
Q Consensus 457 ~i~a~~~~~l 466 (478)
+++..++.++
T Consensus 332 ~Ll~~~~~~l 341 (356)
T PRK09864 332 TLIRDFLTTL 341 (356)
T ss_pred HHHHHHHHhc
Confidence 9999998765
No 98
>PF13153 DUF3985: Protein of unknown function (DUF3985)
Probab=32.14 E-value=41 Score=22.37 Aligned_cols=21 Identities=43% Similarity=0.632 Sum_probs=17.6
Q ss_pred hhhhhhhhhhHHHHHHHhhcc
Q 011730 7 SVAFKILSFNLIIIILLQVES 27 (478)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~ 27 (478)
-||.|||..-|+|+.+.+.|+
T Consensus 21 yvalkilai~lii~~ive~g~ 41 (44)
T PF13153_consen 21 YVALKILAILLIIFLIVEFGS 41 (44)
T ss_pred HHHHHHHHHHHHHHHHHHHcc
Confidence 378899999899888888876
No 99
>PF13755 Sensor_TM1: Sensor N-terminal transmembrane domain
Probab=22.57 E-value=49 Score=25.94 Aligned_cols=25 Identities=28% Similarity=0.418 Sum_probs=20.2
Q ss_pred cchhhhhhhhhhHHHHHHHhhcccC
Q 011730 5 KLSVAFKILSFNLIIIILLQVESLT 29 (478)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (478)
.-+..-||+.|||+-..++.+|-|-
T Consensus 11 ~S~LtrrIl~~Nl~aL~vLv~G~Ly 35 (79)
T PF13755_consen 11 RSPLTRRILAFNLLALAVLVGGILY 35 (79)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 3467889999999999998887653
No 100
>PF03755 YicC_N: YicC-like family, N-terminal region ; InterPro: IPR013527 Proteins in this entry are homologues of YicC (P23839 from SWISSPROT) from Escherichia coli. Although it is relatively poorly characterised YicC has been shown to be important for cells in the stationary phase, and essential for growth at high temperatures []. This domain is found at the N-terminal region of these proteins.
Probab=21.29 E-value=4.6e+02 Score=23.16 Aligned_cols=63 Identities=11% Similarity=0.068 Sum_probs=35.3
Q ss_pred EEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCC-CCCCccCCHHHHHHHHHHHHHh
Q 011730 329 IGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNT-VYPPTVNDEDMYEHVKKVAIDL 395 (478)
Q Consensus 329 ~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~ 395 (478)
+.+.+|.|.. ...++..|++.+++.... .++++.+.-.... .......|.++++.+.++++++
T Consensus 31 Ldi~~rlP~~--l~~lE~~ir~~i~~~l~R--GkV~v~i~~~~~~~~~~~~~in~~l~~~y~~~l~~l 94 (159)
T PF03755_consen 31 LDISIRLPRE--LSSLEPEIRKLIRKKLSR--GKVEVSIRVERSSESAVELRINEELAKAYYEALKEL 94 (159)
T ss_pred eeeEEeCCHH--HHHHHHHHHHHHHHhccc--ceEEEEEEEEECcccCCCcccCHHHHHHHHHHHHHH
Confidence 4555665544 556777888877765432 3444433221111 2334556888888777776654
No 101
>PRK00423 tfb transcription initiation factor IIB; Reviewed
Probab=20.50 E-value=4.8e+02 Score=25.98 Aligned_cols=32 Identities=22% Similarity=0.228 Sum_probs=20.6
Q ss_pred CCCCCCcccCCCC--CccccccCCccCCCCCCcc
Q 011730 32 NNDYAFFDINSLG--SSTTAATTPALKPDGGSVK 63 (478)
Q Consensus 32 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 63 (478)
-+||+-|+.++++ +-.++.+++.++..|-|+.
T Consensus 48 g~EWR~f~~~~~~~~~RvG~~~~~~~~~~gl~T~ 81 (310)
T PRK00423 48 GPEWRAFDPEQREKRSRVGAPMTYTIHDKGLSTD 81 (310)
T ss_pred CCCccCCCccccCCccccCCCCCccccCCCCceE
Confidence 5799999987764 3344556666655455444
No 102
>cd06406 PB1_P67 A PB1 domain is present in p67 proteins which forms a signaling complex with p40, a crucial step for activation of NADPH oxidase during phagocytosis. PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes . A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The p67 proteins contain
Probab=20.48 E-value=4.3e+02 Score=20.77 Aligned_cols=58 Identities=14% Similarity=0.084 Sum_probs=37.4
Q ss_pred cEEEEEEEeccChHhHHHHHHHHHHHHHHHHhhcCCeeEEEEecCCCCCCCCccCCHHHHHHH
Q 011730 326 AVVIGGTLRAFSNTSFYQLLQRIEEVIVEQARVFRCSATVDFFDKGNTVYPPTVNDEDMYEHV 388 (478)
Q Consensus 326 ~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~g~~~ev~~~~~~~~~~~~~~~d~~l~~~~ 388 (478)
+.+..+-||.+++....++.++|.+-++-. +-.+.+.+..+....+.+. .|..+-.++
T Consensus 8 ~f~~tIaIrvp~~~~y~~L~~ki~~kLkl~----~e~i~LsYkde~s~~~v~l-~d~dle~aw 65 (80)
T cd06406 8 HFKYTVAIQVARGLSYATLLQKISSKLELP----AEHITLSYKSEASGEDVIL-SDTNMEDVW 65 (80)
T ss_pred EEEEEEEEEcCCCCCHHHHHHHHHHHhCCC----chhcEEEeccCCCCCccCc-ChHHHHHHH
Confidence 455678899999999999999888776642 2345555554433445555 555555443
Done!