BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011732
(478 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297739782|emb|CBI29964.3| unnamed protein product [Vitis vinifera]
Length = 1363
Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/484 (82%), Positives = 440/484 (90%), Gaps = 6/484 (1%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH+KRLNV+KF+LGGTP+KVLYHSESRLL+VMRTEL+ DT SSDICCVDPLSGSVLSSF
Sbjct: 880 MVHSKRLNVQKFYLGGTPRKVLYHSESRLLLVMRTELSQDTYSSDICCVDPLSGSVLSSF 939
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
KLELGETGKSMELVRV +EQVLV+GTSLSSGPA+MPSGEAESTKGRLIVLC+EHMQNSD
Sbjct: 940 KLELGETGKSMELVRVVNEQVLVIGTSLSSGPAMMPSGEAESTKGRLIVLCLEHMQNSDS 999
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
GSMTFCSKAGSSSQRTSPFREIVGYA EQLS SSLCSSPDD SCDG++LEE+E WQLRLA
Sbjct: 1000 GSMTFCSKAGSSSQRTSPFREIVGYAAEQLSGSSLCSSPDDTSCDGVRLEESEAWQLRLA 1059
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
Y+ TWPGMVLAICPYLDRYFLASAGN+FYVCGFPNDNPQRVRRFAVGRTRFMIM LTAHF
Sbjct: 1060 YTATWPGMVLAICPYLDRYFLASAGNSFYVCGFPNDNPQRVRRFAVGRTRFMIMSLTAHF 1119
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
TRIAVGDCRDG++FYSYHED+RKLEQ+YCDP QRLVADC+LMDVDTAVVSDRKGSIAVLS
Sbjct: 1120 TRIAVGDCRDGVVFYSYHEDSRKLEQLYCDPEQRLVADCILMDVDTAVVSDRKGSIAVLS 1179
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLAS---FESSQT 357
CS+ LEDNASPECNLT NC+Y+MGEIA+SI+KGSF YKLPADD L C S + S+
Sbjct: 1180 CSNHLEDNASPECNLTLNCSYYMGEIAMSIKKGSFSYKLPADDVLKGCDGSNTIIDFSEN 1239
Query: 358 TIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPV---G 414
+I+A TLLGSI++ IPIS EE+ELLEAVQARLA+H LTAP+LGNDH+EFRSREN V G
Sbjct: 1240 SIMAGTLLGSIIMLIPISREEHELLEAVQARLAVHQLTAPILGNDHNEFRSRENSVRKAG 1299
Query: 415 VPKILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLERVH 474
V KILDGDML+QFLELTS QQEAVL+ LGS +T+ +SSK SPI VN+VVQLLERVH
Sbjct: 1300 VSKILDGDMLAQFLELTSMQQEAVLALPLGSLETVTSSSKQTLLSPISVNRVVQLLERVH 1359
Query: 475 YALN 478
YALN
Sbjct: 1360 YALN 1363
>gi|225441567|ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-like [Vitis vinifera]
Length = 1387
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/494 (80%), Positives = 439/494 (88%), Gaps = 16/494 (3%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH+KRLNV+KF+LGGTP+KVLYHSESRLL+VMRTEL+ DT SSDICCVDPLSGSVLSSF
Sbjct: 894 MVHSKRLNVQKFYLGGTPRKVLYHSESRLLLVMRTELSQDTYSSDICCVDPLSGSVLSSF 953
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
KLELGETGKSMELVRV +EQVLV+GTSLSSGPA+MPSGEAESTKGRLIVLC+EHMQNSD
Sbjct: 954 KLELGETGKSMELVRVVNEQVLVIGTSLSSGPAMMPSGEAESTKGRLIVLCLEHMQNSDS 1013
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
GSMTFCSKAGSSSQRTSPFREIVGYA EQLS SSLCSSPDD SCDG++LEE+E WQLRLA
Sbjct: 1014 GSMTFCSKAGSSSQRTSPFREIVGYAAEQLSGSSLCSSPDDTSCDGVRLEESEAWQLRLA 1073
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
Y+ TWPGMVLAICPYLDRYFLASAGN+FYVCGFPNDNPQRVRRFAVGRTRFMIM LTAHF
Sbjct: 1074 YTATWPGMVLAICPYLDRYFLASAGNSFYVCGFPNDNPQRVRRFAVGRTRFMIMSLTAHF 1133
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
TRIAVGDCRDG++FYSYHED+RKLEQ+YCDP QRLVADC+LMDVDTAVVSDRKGSIAVLS
Sbjct: 1134 TRIAVGDCRDGVVFYSYHEDSRKLEQLYCDPEQRLVADCILMDVDTAVVSDRKGSIAVLS 1193
Query: 301 CSDRLE-------------DNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGD 347
CS+ LE DNASPECNLT NC+Y+MGEIA+SI+KGSF YKLPADD L
Sbjct: 1194 CSNHLEELHGFKFLIISCPDNASPECNLTLNCSYYMGEIAMSIKKGSFSYKLPADDVLKG 1253
Query: 348 CLAS---FESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHS 404
C S + S+ +I+A TLLGSI++ IPIS EE+ELLEAVQARLA+H LTAP+LGNDH+
Sbjct: 1254 CDGSNTIIDFSENSIMAGTLLGSIIMLIPISREEHELLEAVQARLAVHQLTAPILGNDHN 1313
Query: 405 EFRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVN 464
EFRSREN GV KILDGDML+QFLELTS QQEAVL+ LGS +T+ +SSK SPI VN
Sbjct: 1314 EFRSRENSAGVSKILDGDMLAQFLELTSMQQEAVLALPLGSLETVTSSSKQTLLSPISVN 1373
Query: 465 QVVQLLERVHYALN 478
+VVQLLERVHYALN
Sbjct: 1374 RVVQLLERVHYALN 1387
>gi|449437538|ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus]
Length = 1376
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/481 (81%), Positives = 434/481 (90%), Gaps = 4/481 (0%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH KRLNV+KFHLGGTP+KVLYHSES+LL+VMRT+L NDT SSDICCVDPLSGS+LSS
Sbjct: 897 MVHTKRLNVQKFHLGGTPRKVLYHSESKLLLVMRTQLINDTSSSDICCVDPLSGSILSSH 956
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
KLE+GETGKSMELVR G+EQVLVVGTSLSSGPAIM SGEAESTKGRLIVLC+EH+QNSD
Sbjct: 957 KLEIGETGKSMELVRNGNEQVLVVGTSLSSGPAIMASGEAESTKGRLIVLCLEHVQNSDT 1016
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
GSMTFCSKAG SS + SPFREIVGYATEQLSSSSLCSSPDDAS DGIKLEETE WQLR+
Sbjct: 1017 GSMTFCSKAGLSSLQASPFREIVGYATEQLSSSSLCSSPDDASSDGIKLEETEAWQLRVV 1076
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
YST+ PGMVLAICPYLDRYFLASAGNAFYVCGFPND+ QRV+RFAVGRTRFMI LTAH
Sbjct: 1077 YSTSLPGMVLAICPYLDRYFLASAGNAFYVCGFPNDSFQRVKRFAVGRTRFMITSLTAHV 1136
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
RIAVGDCRDGILF+SY EDA+KLEQIY DPSQRLVADC L+DVDTAVVSDRKGSIA+LS
Sbjct: 1137 NRIAVGDCRDGILFFSYQEDAKKLEQIYSDPSQRLVADCTLLDVDTAVVSDRKGSIAILS 1196
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCL---ASFESSQT 357
CSDRLEDNASPECNLT NCAY+MGEIA+++RKGSF YKLPADD L C + F+SS
Sbjct: 1197 CSDRLEDNASPECNLTLNCAYYMGEIAMTLRKGSFSYKLPADDLLRGCAVPGSDFDSSHN 1256
Query: 358 TIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPK 417
TIIASTLLGSIVIF P+S +EYELLEAVQA+LA+HPLT+P+LGNDH E+RSRENP+GVPK
Sbjct: 1257 TIIASTLLGSIVIFTPLSRDEYELLEAVQAKLAVHPLTSPILGNDHYEYRSRENPIGVPK 1316
Query: 418 ILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLERVHYAL 477
ILDGD+L+QFLELTS QQE VLS ++GS +K SSK P+S IP+NQVVQLLER+HYAL
Sbjct: 1317 ILDGDILTQFLELTSMQQELVLSSSVGSLSAVKPSSKSMPAS-IPINQVVQLLERIHYAL 1375
Query: 478 N 478
N
Sbjct: 1376 N 1376
>gi|297829750|ref|XP_002882757.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328597|gb|EFH59016.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1384
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/494 (72%), Positives = 410/494 (82%), Gaps = 17/494 (3%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH+KR N +KFHLGGTP+KV+YHSES+LLIVMRT+L DTC+SDICCVDPLSGSVLSS+
Sbjct: 892 MVHSKRRNAQKFHLGGTPRKVIYHSESKLLIVMRTDLY-DTCTSDICCVDPLSGSVLSSY 950
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
KL+ GETGKSMELVRVG+E VLVVGTSLSSGPAI+PSGEAESTKGRLI+LC+EH QNSD
Sbjct: 951 KLKPGETGKSMELVRVGNEHVLVVGTSLSSGPAILPSGEAESTKGRLIILCLEHTQNSDS 1010
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
GSMT CSKAGSSSQRTSPFR++VGY TEQLSSSS CSSPDD S DGIK +E ETWQLRLA
Sbjct: 1011 GSMTICSKAGSSSQRTSPFRDVVGYTTEQLSSSSHCSSPDDNSYDGIKFDEAETWQLRLA 1070
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
+TTWPGMVLAICPYLD YFLASAGNAFYVCGFPND+P+R++RFAVGRTRFMI L +F
Sbjct: 1071 SATTWPGMVLAICPYLDHYFLASAGNAFYVCGFPNDSPERMKRFAVGRTRFMITSLRTYF 1130
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
TRI VGDCRDG+LFYSYHE+++KL QIYCDP+QRLVADC LMD ++ VSDRKGSIA+LS
Sbjct: 1131 TRIVVGDCRDGVLFYSYHEESKKLHQIYCDPAQRLVADCFLMDANSVAVSDRKGSIAILS 1190
Query: 301 CSDRLE--------------DNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALG 346
C D E + +SPE NL NCAY+MGEIA++I+KG IYKLPADD L
Sbjct: 1191 CQDHSEFGTKHLAFSPRDDPEYSSPESNLNLNCAYYMGEIAMAIKKGCNIYKLPADDVLR 1250
Query: 347 D--CLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHS 404
S +++ TIIA TLLGSI +F PISSEEYELLEAVQA+L IHPLTAP+LGNDH+
Sbjct: 1251 SYGLSKSIDTADDTIIAGTLLGSIFVFAPISSEEYELLEAVQAKLGIHPLTAPVLGNDHN 1310
Query: 405 EFRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVN 464
EFR RENP KILDGDML+QFLELT+ QQE+VL S T KASSK S P+ ++
Sbjct: 1311 EFRGRENPSQATKILDGDMLAQFLELTNRQQESVLLTPQPSPSTSKASSKQRSSPPLMLH 1370
Query: 465 QVVQLLERVHYALN 478
QVVQLLERVHYAL+
Sbjct: 1371 QVVQLLERVHYALH 1384
>gi|356570929|ref|XP_003553635.1| PREDICTED: uncharacterized protein LOC100799711 [Glycine max]
Length = 1258
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/481 (75%), Positives = 404/481 (83%), Gaps = 6/481 (1%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
M H KRLNV+KFHL GTP+KVLYH ES++L+VMRTELN C SDICCVD LSGSVLSSF
Sbjct: 781 MGHGKRLNVQKFHLEGTPRKVLYHDESKMLLVMRTELNCGPCLSDICCVDSLSGSVLSSF 840
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
+LELGETGKSMELVRVG EQVLVVGTSLSSGP MP+GEAES KGRL+VLC++H+QNSD
Sbjct: 841 RLELGETGKSMELVRVGSEQVLVVGTSLSSGPHTMPTGEAESCKGRLLVLCLDHVQNSDS 900
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
GSMTFCSKAGSSSQ+TSPF EIV YA E LSSSSL SSPDD S DGIKL E E WQ RLA
Sbjct: 901 GSMTFCSKAGSSSQKTSPFHEIVTYAPELLSSSSLGSSPDDNSSDGIKLHENEVWQFRLA 960
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
Y+T WPG+VL ICPYLDRYFLA+AGNAFYVCGFPNDNPQRVRR+A+GRTR+MI LTAH
Sbjct: 961 YATKWPGVVLKICPYLDRYFLATAGNAFYVCGFPNDNPQRVRRYAMGRTRYMITSLTAHL 1020
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
TRIAVGDCRDGIL YSYHE+A+KLE +Y DPSQR+VADC+LMD DTAVVSDRKGSIAVL
Sbjct: 1021 TRIAVGDCRDGILLYSYHEEAKKLELLYNDPSQRIVADCILMDADTAVVSDRKGSIAVL- 1079
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDAL---GDCLASFESSQT 357
CSD LEDNA +CN+T +CAY M EIA+SI+KGS+ Y+LPADD L + +S Q
Sbjct: 1080 CSDHLEDNAGAQCNMTLSCAYFMAEIAMSIKKGSYSYRLPADDVLEGGNGPKTNVDSLQN 1139
Query: 358 TIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPK 417
TIIASTLLGSI+IFIP+S EEYELLE VQARL +H LTAP+LGNDH EFRSREN VGVPK
Sbjct: 1140 TIIASTLLGSIMIFIPLSREEYELLEVVQARLVVHHLTAPVLGNDHHEFRSRENRVGVPK 1199
Query: 418 ILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLERVHYAL 477
ILDGD+L+QFLELTS QQ+ +LS L D +K S K S + VNQVVQLLERVH AL
Sbjct: 1200 ILDGDILTQFLELTSMQQKMILS--LEQPDMVKPSLKPLLPSHVSVNQVVQLLERVHDAL 1257
Query: 478 N 478
N
Sbjct: 1258 N 1258
>gi|6671952|gb|AAF23212.1|AC016795_25 hypothetical protein [Arabidopsis thaliana]
gi|10998135|dbj|BAB03106.1| unnamed protein product [Arabidopsis thaliana]
Length = 1331
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/486 (73%), Positives = 407/486 (83%), Gaps = 9/486 (1%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH+KR N +KF LGGTP+KV+YHSES+LLIVMRT+L DTC+SDICCVDPLSGSVLSS+
Sbjct: 847 MVHSKRRNAQKFQLGGTPRKVIYHSESKLLIVMRTDLY-DTCTSDICCVDPLSGSVLSSY 905
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
KL+ GETGKSMELVRVG+E VLVVGTSLSSGPAI+PSGEAESTKGR+I+LC+EH QNSD
Sbjct: 906 KLKPGETGKSMELVRVGNEHVLVVGTSLSSGPAILPSGEAESTKGRVIILCLEHTQNSDS 965
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
GSMT CSKA SSSQRTSPF ++VGY TE LSSSSLCSSPDD S DGIKL+E ETWQLRLA
Sbjct: 966 GSMTICSKACSSSQRTSPFHDVVGYTTENLSSSSLCSSPDDYSYDGIKLDEAETWQLRLA 1025
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
STTWPGMVLAICPYLD YFLASAGNAFYVCGFPND+P+R++RFAVGRTRFMI L +F
Sbjct: 1026 SSTTWPGMVLAICPYLDHYFLASAGNAFYVCGFPNDSPERMKRFAVGRTRFMITSLRTYF 1085
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
TRI VGDCRDG+LFYSYHE+++KL QIYCDP+QRLVADC LMD ++ VSDRKGSIA+LS
Sbjct: 1086 TRIVVGDCRDGVLFYSYHEESKKLHQIYCDPAQRLVADCFLMDANSVAVSDRKGSIAILS 1145
Query: 301 CSDRLE------DNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGD--CLASF 352
C D + + +SPE NL NCAY+MGEIA+SI+KG IYKLPADD L S
Sbjct: 1146 CKDHSDFGMKHLEYSSPESNLNLNCAYYMGEIAMSIKKGCNIYKLPADDVLRSYGLSKSI 1205
Query: 353 ESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+++ TIIA TLLGSI +F PISSEEYELLE VQA+L IHPLTAP+LGNDH+EFR RENP
Sbjct: 1206 DTADDTIIAGTLLGSIFVFAPISSEEYELLEGVQAKLGIHPLTAPVLGNDHNEFRGRENP 1265
Query: 413 VGVPKILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLER 472
KILDGDML+QFLELT+ QQE+VLS S T KASSK P+ ++QVVQLLER
Sbjct: 1266 SQARKILDGDMLAQFLELTNRQQESVLSTPQPSPSTSKASSKQRSFPPLMLHQVVQLLER 1325
Query: 473 VHYALN 478
VHYAL+
Sbjct: 1326 VHYALH 1331
>gi|42564075|ref|NP_187802.2| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein [Arabidopsis thaliana]
gi|29824376|gb|AAP04148.1| unknown protein [Arabidopsis thaliana]
gi|110739103|dbj|BAF01468.1| hypothetical protein [Arabidopsis thaliana]
gi|332641608|gb|AEE75129.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein [Arabidopsis thaliana]
Length = 1379
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/486 (73%), Positives = 407/486 (83%), Gaps = 9/486 (1%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH+KR N +KF LGGTP+KV+YHSES+LLIVMRT+L DTC+SDICCVDPLSGSVLSS+
Sbjct: 895 MVHSKRRNAQKFQLGGTPRKVIYHSESKLLIVMRTDLY-DTCTSDICCVDPLSGSVLSSY 953
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
KL+ GETGKSMELVRVG+E VLVVGTSLSSGPAI+PSGEAESTKGR+I+LC+EH QNSD
Sbjct: 954 KLKPGETGKSMELVRVGNEHVLVVGTSLSSGPAILPSGEAESTKGRVIILCLEHTQNSDS 1013
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
GSMT CSKA SSSQRTSPF ++VGY TE LSSSSLCSSPDD S DGIKL+E ETWQLRLA
Sbjct: 1014 GSMTICSKACSSSQRTSPFHDVVGYTTENLSSSSLCSSPDDYSYDGIKLDEAETWQLRLA 1073
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
STTWPGMVLAICPYLD YFLASAGNAFYVCGFPND+P+R++RFAVGRTRFMI L +F
Sbjct: 1074 SSTTWPGMVLAICPYLDHYFLASAGNAFYVCGFPNDSPERMKRFAVGRTRFMITSLRTYF 1133
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
TRI VGDCRDG+LFYSYHE+++KL QIYCDP+QRLVADC LMD ++ VSDRKGSIA+LS
Sbjct: 1134 TRIVVGDCRDGVLFYSYHEESKKLHQIYCDPAQRLVADCFLMDANSVAVSDRKGSIAILS 1193
Query: 301 CSDRLE------DNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGD--CLASF 352
C D + + +SPE NL NCAY+MGEIA+SI+KG IYKLPADD L S
Sbjct: 1194 CKDHSDFGMKHLEYSSPESNLNLNCAYYMGEIAMSIKKGCNIYKLPADDVLRSYGLSKSI 1253
Query: 353 ESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+++ TIIA TLLGSI +F PISSEEYELLE VQA+L IHPLTAP+LGNDH+EFR RENP
Sbjct: 1254 DTADDTIIAGTLLGSIFVFAPISSEEYELLEGVQAKLGIHPLTAPVLGNDHNEFRGRENP 1313
Query: 413 VGVPKILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLER 472
KILDGDML+QFLELT+ QQE+VLS S T KASSK P+ ++QVVQLLER
Sbjct: 1314 SQARKILDGDMLAQFLELTNRQQESVLSTPQPSPSTSKASSKQRSFPPLMLHQVVQLLER 1373
Query: 473 VHYALN 478
VHYAL+
Sbjct: 1374 VHYALH 1379
>gi|30681985|ref|NP_850565.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein [Arabidopsis thaliana]
gi|332641609|gb|AEE75130.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein [Arabidopsis thaliana]
Length = 1329
Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/494 (72%), Positives = 408/494 (82%), Gaps = 17/494 (3%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH+KR N +KF LGGTP+KV+YHSES+LLIVMRT+L DTC+SDICCVDPLSGSVLSS+
Sbjct: 837 MVHSKRRNAQKFQLGGTPRKVIYHSESKLLIVMRTDLY-DTCTSDICCVDPLSGSVLSSY 895
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
KL+ GETGKSMELVRVG+E VLVVGTSLSSGPAI+PSGEAESTKGR+I+LC+EH QNSD
Sbjct: 896 KLKPGETGKSMELVRVGNEHVLVVGTSLSSGPAILPSGEAESTKGRVIILCLEHTQNSDS 955
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
GSMT CSKA SSSQRTSPF ++VGY TE LSSSSLCSSPDD S DGIKL+E ETWQLRLA
Sbjct: 956 GSMTICSKACSSSQRTSPFHDVVGYTTENLSSSSLCSSPDDYSYDGIKLDEAETWQLRLA 1015
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
STTWPGMVLAICPYLD YFLASAGNAFYVCGFPND+P+R++RFAVGRTRFMI L +F
Sbjct: 1016 SSTTWPGMVLAICPYLDHYFLASAGNAFYVCGFPNDSPERMKRFAVGRTRFMITSLRTYF 1075
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
TRI VGDCRDG+LFYSYHE+++KL QIYCDP+QRLVADC LMD ++ VSDRKGSIA+LS
Sbjct: 1076 TRIVVGDCRDGVLFYSYHEESKKLHQIYCDPAQRLVADCFLMDANSVAVSDRKGSIAILS 1135
Query: 301 CSDRLE-----------DN---ASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALG 346
C D + DN +SPE NL NCAY+MGEIA+SI+KG IYKLPADD L
Sbjct: 1136 CKDHSDFGMKHLVKIPHDNPEYSSPESNLNLNCAYYMGEIAMSIKKGCNIYKLPADDVLR 1195
Query: 347 D--CLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHS 404
S +++ TIIA TLLGSI +F PISSEEYELLE VQA+L IHPLTAP+LGNDH+
Sbjct: 1196 SYGLSKSIDTADDTIIAGTLLGSIFVFAPISSEEYELLEGVQAKLGIHPLTAPVLGNDHN 1255
Query: 405 EFRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVN 464
EFR RENP KILDGDML+QFLELT+ QQE+VLS S T KASSK P+ ++
Sbjct: 1256 EFRGRENPSQARKILDGDMLAQFLELTNRQQESVLSTPQPSPSTSKASSKQRSFPPLMLH 1315
Query: 465 QVVQLLERVHYALN 478
QVVQLLERVHYAL+
Sbjct: 1316 QVVQLLERVHYALH 1329
>gi|358348136|ref|XP_003638105.1| Pre-mRNA-splicing factor rse1 [Medicago truncatula]
gi|355504040|gb|AES85243.1| Pre-mRNA-splicing factor rse1 [Medicago truncatula]
Length = 1370
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/485 (73%), Positives = 404/485 (83%), Gaps = 11/485 (2%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MV++KRLN+RKFHL GTP+KVLYH+ES++L+VMRTEL+ TC SDICCVDPLSGSVLSSF
Sbjct: 890 MVYSKRLNMRKFHLKGTPRKVLYHNESQMLLVMRTELSIGTCLSDICCVDPLSGSVLSSF 949
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
+LELGET SMEL+RVG EQVLVVGTSL SGP +PSGEAES KGRL+VLCI+H+QNSD
Sbjct: 950 RLELGETATSMELIRVGSEQVLVVGTSLYSGPPAIPSGEAESAKGRLLVLCIDHVQNSDS 1009
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSS--PDDASCDGIKLEETETWQLR 178
GSMTFCSKAGSSSQRTSPF EIVG+ EQL SS + PDD S DGIKL+E E WQ R
Sbjct: 1010 GSMTFCSKAGSSSQRTSPFNEIVGHVPEQLCLSSSSLASSPDDNSFDGIKLDENEIWQFR 1069
Query: 179 LAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTA 238
LA +TTW G+V AICPYLDRYFLASA NAFYVCGFPND PQRVR++AVGRTR+ I LTA
Sbjct: 1070 LASATTWQGIVQAICPYLDRYFLASAANAFYVCGFPNDTPQRVRKYAVGRTRYSIRSLTA 1129
Query: 239 HFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAV 298
+F+RIAVGD RDGILF+SYHE+ARKLEQ+Y DPSQRLVADC+LMD +TA+VSDRKGSIAV
Sbjct: 1130 YFSRIAVGDNRDGILFFSYHEEARKLEQLYGDPSQRLVADCILMDDNTAIVSDRKGSIAV 1189
Query: 299 LSCSDRLE--DNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLA---SFE 353
L CSD LE +NAS ECNL +CAY M EIAVSIRKGS+ Y+LPADD L + + +
Sbjct: 1190 L-CSDHLEAPNNASTECNLRLSCAYFMAEIAVSIRKGSYSYRLPADDLLSGGIGPKTNVD 1248
Query: 354 SSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPV 413
S Q TI+ STLLGSI+IFIP+S EEYELLEAVQARLA+H LTAP+LGNDH+EFRSRENPV
Sbjct: 1249 SLQNTILVSTLLGSIMIFIPLSREEYELLEAVQARLAVHHLTAPVLGNDHNEFRSRENPV 1308
Query: 414 GVPKILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLERV 473
G PKILDGDML+QFLELT+ QQ +LS + D +K S K P VNQVVQLLERV
Sbjct: 1309 GTPKILDGDMLTQFLELTNMQQNNILS--MEPLDVVKPSLK-PLLPQFSVNQVVQLLERV 1365
Query: 474 HYALN 478
HYALN
Sbjct: 1366 HYALN 1370
>gi|255581562|ref|XP_002531586.1| spliceosomal protein sap, putative [Ricinus communis]
gi|223528782|gb|EEF30789.1| spliceosomal protein sap, putative [Ricinus communis]
Length = 1220
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/416 (82%), Positives = 376/416 (90%), Gaps = 4/416 (0%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH+KRLNV+KFHLGGTP+KVLYHSESRLL+VMRTEL+NDTCSSDICCVDPLSGSV+SSF
Sbjct: 798 MVHSKRLNVQKFHLGGTPRKVLYHSESRLLLVMRTELSNDTCSSDICCVDPLSGSVVSSF 857
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
KLE GETGKSMELVRVG EQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLC+EH+Q+SD
Sbjct: 858 KLEHGETGKSMELVRVGTEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCLEHLQSSDS 917
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
GSMTFCSKAGSSSQRTSPF E+VGY EQLSSSSL S D SCDG+KLEE+E WQLRLA
Sbjct: 918 GSMTFCSKAGSSSQRTSPFCEVVGYTAEQLSSSSL-CSSPDDSCDGVKLEESEAWQLRLA 976
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
Y+T WPGM L ICPYLDRYFLASAG+AFYVCGFPNDNPQRVR+FA+ RTRF I+ LTAHF
Sbjct: 977 YATKWPGMALTICPYLDRYFLASAGSAFYVCGFPNDNPQRVRKFAIARTRFTIISLTAHF 1036
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
TRIAVGDCRDGILFYSYHED RKLEQ+YCDPSQRLVADC+L+DVDTAVVSDRKGSIAVLS
Sbjct: 1037 TRIAVGDCRDGILFYSYHEDTRKLEQVYCDPSQRLVADCILLDVDTAVVSDRKGSIAVLS 1096
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLA---SFESSQT 357
CS E NASPECNLT CAY+MGEIA+SIRKGSF Y+LPADD L A + +S
Sbjct: 1097 CSGDSERNASPECNLTLTCAYYMGEIAMSIRKGSFSYRLPADDMLMGYDAVTPNNYASHN 1156
Query: 358 TIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPV 413
TI+ASTLLGSI+IFIP++ EE+ELLEAVQARL +HPLTAP+LGNDHSEFRSRENPV
Sbjct: 1157 TIMASTLLGSIIIFIPLTREEHELLEAVQARLVVHPLTAPILGNDHSEFRSRENPV 1212
>gi|356505471|ref|XP_003521514.1| PREDICTED: uncharacterized protein LOC100806799 [Glycine max]
Length = 1278
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/468 (74%), Positives = 396/468 (84%), Gaps = 6/468 (1%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH+KRLN++KFHL GTP+KVLYH ES++L+VMRTELN TC SDIC +DPLSGSVLSSF
Sbjct: 787 MVHSKRLNMQKFHLEGTPRKVLYHDESKMLLVMRTELNCGTCLSDICIMDPLSGSVLSSF 846
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
+LELGETGKSMELVRVG EQVLVVGTSLSSGP M +GEAES KGRL+VLC++H+QNSD
Sbjct: 847 RLELGETGKSMELVRVGSEQVLVVGTSLSSGPHTMATGEAESCKGRLLVLCLDHVQNSDS 906
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
GS+TFCSKAGSSSQ+TSPFREIV YA EQLSSSSL SSPDD S DGIKL+E E WQ RL
Sbjct: 907 GSVTFCSKAGSSSQKTSPFREIVTYAPEQLSSSSLGSSPDDNSSDGIKLDENEVWQFRLT 966
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
++T WPG+VL ICPYLDRYFLA+AGNAFYVCGFPNDNPQRVRR+A+GR RFMI LTAHF
Sbjct: 967 FATKWPGVVLKICPYLDRYFLATAGNAFYVCGFPNDNPQRVRRYAMGRARFMITSLTAHF 1026
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
TRIAVGDCRDGIL YSYHE+A+KLE +Y DPS RLVADC+LMD DTAVVSDRKGSIAVL
Sbjct: 1027 TRIAVGDCRDGILLYSYHEEAKKLELLYNDPSLRLVADCILMDADTAVVSDRKGSIAVL- 1085
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDAL---GDCLASFESSQT 357
CSD LEDNA +CN+ +CAY M EIA+SI+KGS+ Y+LPADD L + +S Q
Sbjct: 1086 CSDHLEDNAGAQCNMALSCAYFMAEIAMSIKKGSYSYRLPADDVLQGGNGPKTNVDSLQN 1145
Query: 358 TIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPK 417
TIIA+TLLGSI+IFIP+S EEYELLEAVQARL +H LTAP+LGNDH+EFRSREN VGVPK
Sbjct: 1146 TIIATTLLGSIMIFIPLSREEYELLEAVQARLVVHHLTAPVLGNDHNEFRSRENRVGVPK 1205
Query: 418 ILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQ 465
ILDGDML+QFLELTS QQ+ +LS L D +K S K S + VNQ
Sbjct: 1206 ILDGDMLTQFLELTSMQQKMILSLELP--DMVKPSLKPLLPSHVSVNQ 1251
>gi|147860990|emb|CAN78747.1| hypothetical protein VITISV_022228 [Vitis vinifera]
Length = 1298
Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust.
Identities = 293/332 (88%), Positives = 318/332 (95%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH+KRLNV+KF+LGGTP+KVLYHSESRLL+VMRTEL+ DT SSDICCVDPLSGSVLSSF
Sbjct: 955 MVHSKRLNVQKFYLGGTPRKVLYHSESRLLLVMRTELSQDTYSSDICCVDPLSGSVLSSF 1014
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
KLELGETGKSMELVRV +EQVLV+GTSLSSGPA+MPSGEAESTKGRLIVLC+EHMQNSD
Sbjct: 1015 KLELGETGKSMELVRVVNEQVLVIGTSLSSGPAMMPSGEAESTKGRLIVLCLEHMQNSDS 1074
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
GSMTFCSKAGSSSQRTSPFREIVGYA EQLS SSLCSSPDD SCDG++LEE+E WQLRLA
Sbjct: 1075 GSMTFCSKAGSSSQRTSPFREIVGYAAEQLSGSSLCSSPDDTSCDGVRLEESEAWQLRLA 1134
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
Y+ TWPGMVLAICPYLDRYFLASAGN+FY CGFPNDNPQRVRRFAVGRTRFMIM LTAHF
Sbjct: 1135 YTATWPGMVLAICPYLDRYFLASAGNSFYACGFPNDNPQRVRRFAVGRTRFMIMSLTAHF 1194
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
TRIAVGDCRDG++FYSYHED+RKLEQ+YCDP QRLVADC+LMDVDTAVVSDRKGSIAVLS
Sbjct: 1195 TRIAVGDCRDGVVFYSYHEDSRKLEQLYCDPEQRLVADCILMDVDTAVVSDRKGSIAVLS 1254
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSIRK 332
CS+ LEDNASPECNLT NC+Y+MGEIA+SI+K
Sbjct: 1255 CSNHLEDNASPECNLTLNCSYYMGEIAMSIKK 1286
>gi|414883930|tpg|DAA59944.1| TPA: hypothetical protein ZEAMMB73_987949 [Zea mays]
Length = 1355
Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust.
Identities = 262/479 (54%), Positives = 343/479 (71%), Gaps = 15/479 (3%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
+VH KRLN +KF +GGTP+KVLYH+ESR L+V+RT LN + SSD+ VDP +G +LS +
Sbjct: 891 LVHGKRLNAQKFSIGGTPRKVLYHNESRTLLVLRTGLNGASSSSDVVQVDPQNGVLLSRY 950
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQN-SD 119
K E GET K M++ ++G++QVL+VGT+ S+G +M +GEAES KGRLIVL +E +++ +
Sbjct: 951 KCEPGETAKCMQIAKIGNDQVLIVGTTKSAGRPMMSNGEAESIKGRLIVLSLEAVESPRE 1010
Query: 120 CGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRL 179
S SS SPF EIVGY TE+ SS+S+CSSPD+ SC+ I+ E+ T QLR
Sbjct: 1011 SSSFIPTFSFNPSSHSGSPFHEIVGYTTEEFSSNSMCSSPDEFSCNQIQAEQM-TGQLRS 1069
Query: 180 AYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH 239
G VLA+CPYLDRY LA+AGN YV GF N+NP R+++ AVGRTRF I L
Sbjct: 1070 LTQYILNGAVLALCPYLDRYVLAAAGNMIYVFGFTNENPHRIKKCAVGRTRFTITCLKTF 1129
Query: 240 FTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL 299
+RIAVGDCRDG+LFYSY+E RKLE +Y DP+ RLV D L++ +TAVVSDR+GSI+VL
Sbjct: 1130 ASRIAVGDCRDGVLFYSYNESHRKLELVYSDPAHRLVGDIALLNCETAVVSDRRGSISVL 1189
Query: 300 SCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTI 359
SC+ RLE + SP+ NL NC+++MGE A+SI+K +F Y+LP DD D E+ I
Sbjct: 1190 SCT-RLEVSESPQKNLAVNCSFYMGETAMSIQKAAFRYRLPIDD---DTDPVLETVYNCI 1245
Query: 360 IASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKIL 419
+AST+LGS+ + IP+SSEE++LL+ VQ +L++HPLTAP+LGNDH+EFR R P VP IL
Sbjct: 1246 VASTMLGSLFVMIPLSSEEHQLLQDVQEKLSVHPLTAPVLGNDHAEFRQRGTPSVVPPIL 1305
Query: 420 DGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLERVHYALN 478
DGDML QFLELT QQ+A+L+ L K + P+ V QV+Q LERVHYALN
Sbjct: 1306 DGDMLVQFLELTGEQQQAILTHALPG----KGQHR-----PLSVFQVLQTLERVHYALN 1355
>gi|115471083|ref|NP_001059140.1| Os07g0203700 [Oryza sativa Japonica Group]
gi|113610676|dbj|BAF21054.1| Os07g0203700, partial [Oryza sativa Japonica Group]
Length = 666
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 264/479 (55%), Positives = 342/479 (71%), Gaps = 16/479 (3%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH KRLN +KF +GGTP+KVLYHS+SR L+V+RT L + +CSSDI +DP +G++LS F
Sbjct: 203 MVHGKRLNAQKFSIGGTPRKVLYHSDSRTLLVLRTGLTSVSCSSDIVQIDPSNGALLSRF 262
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQN-SD 119
K E GET K M++ ++G++QVL+VGTS S+G +MP+GEAES KGRLI+L +E +++ +
Sbjct: 263 KCEPGETAKCMQIAKIGNDQVLIVGTSKSNGRPMMPNGEAESIKGRLILLSLETIESPRE 322
Query: 120 CGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRL 179
GS T S +SS SPF E VGYA E+LSS+S+CSSPD+ C+ I+ E LR
Sbjct: 323 SGSFTAASNL-NSSHAGSPFPEFVGYAAEELSSNSMCSSPDEVCCNQIQ-PELMAGHLRS 380
Query: 180 AYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH 239
T+ G VLA+ PYLDRY LA+AGN +V GF N++P R++++ RTRF I L +
Sbjct: 381 LVQHTFNGAVLAVHPYLDRYVLAAAGNVLFVFGFLNESPHRIKKYTTSRTRFTITCLKTY 440
Query: 240 FTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL 299
+RIAVGDCRDG+LFYSYHE+ RKLE IY DP+QRLV D L+ +TAVVSDR+GSI+VL
Sbjct: 441 ASRIAVGDCRDGVLFYSYHENLRKLELIYSDPAQRLVGDVALLSCETAVVSDRRGSISVL 500
Query: 300 SCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTI 359
SC RLE + SPE NL +C+++MGE A+SI+K +F + LP DD L ES +
Sbjct: 501 SCP-RLEVSESPEKNLAVHCSFYMGETAMSIQKVAFKHWLPIDDLTEPVL---ESVYNCV 556
Query: 360 IASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKIL 419
+ASTLLGSI + IP++SEE+++L+ VQ RL++HPLTAPLLGNDH+EFR R P GVP IL
Sbjct: 557 VASTLLGSIFVMIPLTSEEHQMLQDVQERLSVHPLTAPLLGNDHAEFRRRGIPSGVPPIL 616
Query: 420 DGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLERVHYALN 478
DGDML QFLELTS QQ VL+ S I V QV++ LERVHYALN
Sbjct: 617 DGDMLVQFLELTSEQQHDVLNIV---------SPGKKRQHDISVFQVMRALERVHYALN 666
>gi|357111224|ref|XP_003557414.1| PREDICTED: DNA damage-binding protein 1-like [Brachypodium
distachyon]
Length = 1356
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 260/478 (54%), Positives = 340/478 (71%), Gaps = 14/478 (2%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH KRLN +K + GTP+KVLYHS+SR L+VMRT L +CSSDI +DP +G++LS F
Sbjct: 893 MVHGKRLNAQKLSIEGTPRKVLYHSDSRTLLVMRTGLTGASCSSDIVQIDPNNGTLLSRF 952
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
K E GET K +++ ++G+EQVL+VGTS S+ +MP+GEAES KGRLIVL ++ + +
Sbjct: 953 KCEPGETAKCIQIAKIGNEQVLLVGTSKSTDRPMMPNGEAESIKGRLIVLSLDTLGSPRE 1012
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
S + SSS T F EIVGYATE+ SS+S+CSSPDD + I+ E+ +R
Sbjct: 1013 SSSFVPTSNLSSSSHTGSFPEIVGYATEEFSSNSMCSSPDDVCYNQIQHEQM-AGHMRSL 1071
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
T+ G VLA+ PYLDRY +A+AGNA V GF N+NP R++++A+ RTRF I L +
Sbjct: 1072 THVTFAGAVLAVYPYLDRYVVAAAGNALCVFGFVNENPHRMKKYAISRTRFTITCLKTYA 1131
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
+RIA GDCRDG+LFYSYHE+ RKLE IY DP+QRLV D L++ +TAVVSDR+GSI+VLS
Sbjct: 1132 SRIAAGDCRDGVLFYSYHENLRKLELIYADPAQRLVGDVALLNCETAVVSDRRGSISVLS 1191
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTII 360
C RLE + SPE NL C++ MGEIA+SI+K +F Y+LP DD L ES+ ++
Sbjct: 1192 CP-RLEVSESPEKNLAVRCSFFMGEIAMSIQKAAFKYRLPIDDETDPVL---ESAYNCVV 1247
Query: 361 ASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILD 420
ASTLLGS+ + IP++SEE+ LL+ VQ RL++HPLTAP+LGNDH+EFR R P+G+P ILD
Sbjct: 1248 ASTLLGSVFVMIPLTSEEHHLLQDVQERLSLHPLTAPILGNDHAEFRRRGIPLGIPPILD 1307
Query: 421 GDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLERVHYALN 478
GDML QFLELT QQ+AVL+ S+ P I V QV++ LER+HYALN
Sbjct: 1308 GDMLVQFLELTGEQQQAVLN---------DMPSEKGPHRSISVFQVMRTLERLHYALN 1356
>gi|33146591|dbj|BAC79787.1| putative Splicing factor 3B subunit 3 [Oryza sativa Japonica Group]
gi|222636635|gb|EEE66767.1| hypothetical protein OsJ_23488 [Oryza sativa Japonica Group]
gi|429459546|gb|AFZ84679.1| spotted leaf 5 [Oryza sativa Japonica Group]
Length = 1355
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 264/479 (55%), Positives = 342/479 (71%), Gaps = 16/479 (3%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH KRLN +KF +GGTP+KVLYHS+SR L+V+RT L + +CSSDI +DP +G++LS F
Sbjct: 892 MVHGKRLNAQKFSIGGTPRKVLYHSDSRTLLVLRTGLTSVSCSSDIVQIDPSNGALLSRF 951
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQN-SD 119
K E GET K M++ ++G++QVL+VGTS S+G +MP+GEAES KGRLI+L +E +++ +
Sbjct: 952 KCEPGETAKCMQIAKIGNDQVLIVGTSKSNGRPMMPNGEAESIKGRLILLSLETIESPRE 1011
Query: 120 CGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRL 179
GS T S +SS SPF E VGYA E+LSS+S+CSSPD+ C+ I+ E LR
Sbjct: 1012 SGSFTAASNL-NSSHAGSPFPEFVGYAAEELSSNSMCSSPDEVCCNQIQ-PELMAGHLRS 1069
Query: 180 AYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH 239
T+ G VLA+ PYLDRY LA+AGN +V GF N++P R++++ RTRF I L +
Sbjct: 1070 LVQHTFNGAVLAVHPYLDRYVLAAAGNVLFVFGFLNESPHRIKKYTTSRTRFTITCLKTY 1129
Query: 240 FTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL 299
+RIAVGDCRDG+LFYSYHE+ RKLE IY DP+QRLV D L+ +TAVVSDR+GSI+VL
Sbjct: 1130 ASRIAVGDCRDGVLFYSYHENLRKLELIYSDPAQRLVGDVALLSCETAVVSDRRGSISVL 1189
Query: 300 SCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTI 359
SC RLE + SPE NL +C+++MGE A+SI+K +F + LP DD L ES +
Sbjct: 1190 SCP-RLEVSESPEKNLAVHCSFYMGETAMSIQKVAFKHWLPIDDLTEPVL---ESVYNCV 1245
Query: 360 IASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKIL 419
+ASTLLGSI + IP++SEE+++L+ VQ RL++HPLTAPLLGNDH+EFR R P GVP IL
Sbjct: 1246 VASTLLGSIFVMIPLTSEEHQMLQDVQERLSVHPLTAPLLGNDHAEFRRRGIPSGVPPIL 1305
Query: 420 DGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLERVHYALN 478
DGDML QFLELTS QQ VL+ S I V QV++ LERVHYALN
Sbjct: 1306 DGDMLVQFLELTSEQQHDVLNIV---------SPGKKRQHDISVFQVMRALERVHYALN 1355
>gi|326510951|dbj|BAJ91823.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1360
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 264/479 (55%), Positives = 336/479 (70%), Gaps = 16/479 (3%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH KRLN +KF +GGTP+KVLYHS+SR L+VMRT L +CSSDI +DP +G +LS F
Sbjct: 897 MVHGKRLNAQKFSIGGTPRKVLYHSDSRTLLVMRTGLTGASCSSDIVQIDPNNGILLSRF 956
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQN-SD 119
K ELGET K +++ ++G EQVL+VGTS S +MP+GEAE KGRLIVL ++ + + +
Sbjct: 957 KCELGETAKCIQIAKIGSEQVLIVGTSKSIDRPMMPNGEAEGIKGRLIVLSLDTLGSPHE 1016
Query: 120 CGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRL 179
C S S SSS T F EIVGYA E+ SS+S+CSSPDD + I+ E+ LR
Sbjct: 1017 CSSFIPTSNLSSSSH-TGSFPEIVGYANEEFSSNSMCSSPDDICYNQIQFEQIAG-NLRS 1074
Query: 180 AYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH 239
T+ G VLA+ PYLDRY LA+AGN V GF N+NP R++++AV RTRF I L +
Sbjct: 1075 LTHVTFTGAVLAVYPYLDRYVLAAAGNTLSVFGFVNENPHRMKKYAVSRTRFTITCLKTY 1134
Query: 240 FTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL 299
++IA GDCRDG+LFYSYHE+ RKLE +Y DP+QRLV D VL+D +TAVVSDR GSI+VL
Sbjct: 1135 ASQIAAGDCRDGVLFYSYHENLRKLELVYADPAQRLVGDVVLLDCETAVVSDRCGSISVL 1194
Query: 300 SCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTI 359
SC LE + SPE NL C++ MGEIA+SI+K +F Y+L D L ES+ +
Sbjct: 1195 SCPG-LEVSESPEKNLAVQCSFFMGEIAMSIQKAAFKYRLSIGDETDPVL---ESAYNCV 1250
Query: 360 IASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKIL 419
+ASTLLGS+ + IP++SEE++LL+ VQ RL++HPLTAP+LGNDH+EFR R P GVP IL
Sbjct: 1251 VASTLLGSVFVMIPLTSEEHQLLQDVQERLSLHPLTAPILGNDHAEFRRRGIPSGVPSIL 1310
Query: 420 DGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLERVHYALN 478
DGDML QFLELTS QQ+ V+ SS P I V QV+++LERVHYALN
Sbjct: 1311 DGDMLVQFLELTSEQQQTVID---------DGSSVKVPHRSISVFQVMRMLERVHYALN 1360
>gi|326519701|dbj|BAK00223.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1360
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 263/479 (54%), Positives = 335/479 (69%), Gaps = 16/479 (3%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH KRLN +KF +GGTP+KVLYHS+SR L+VMRT L +CSSDI +DP +G +LS F
Sbjct: 897 MVHGKRLNAQKFSIGGTPRKVLYHSDSRTLLVMRTGLTGASCSSDIVQIDPNNGILLSRF 956
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQN-SD 119
K ELGET K +++ ++G EQVL+VGTS S +MP+GEAE KGRLIVL ++ + + +
Sbjct: 957 KCELGETAKCIQIAKIGSEQVLIVGTSKSIDRPMMPNGEAEGIKGRLIVLSLDTLGSPHE 1016
Query: 120 CGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRL 179
C S S SSS T F EIVG A E+ SS+S+CSSPDD + I+ E+ LR
Sbjct: 1017 CSSFIPTSNLSSSSH-TGSFPEIVGCANEEFSSNSMCSSPDDICYNQIQFEQIAG-NLRS 1074
Query: 180 AYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH 239
T+ G VLA+ PYLDRY LA+AGN V GF N+NP R++++AV RTRF I L +
Sbjct: 1075 LTHVTFTGAVLAVYPYLDRYVLAAAGNTLSVFGFVNENPHRMKKYAVSRTRFTITCLKTY 1134
Query: 240 FTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL 299
++IA GDCRDG+LFYSYHE+ RKLE +Y DP+QRLV D VL+D +TAVVSDR GSI+VL
Sbjct: 1135 ASQIAAGDCRDGVLFYSYHENLRKLELVYADPAQRLVGDVVLLDCETAVVSDRCGSISVL 1194
Query: 300 SCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTI 359
SC LE + SPE NL C++ MGEIA+SI+K +F Y+L D L ES+ +
Sbjct: 1195 SCPG-LEVSESPEKNLAVQCSFFMGEIAMSIQKAAFKYRLSIGDETDPVL---ESAYNCV 1250
Query: 360 IASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKIL 419
+ASTLLGS+ + IP++SEE++LL+ VQ RL++HPLTAP+LGNDH+EFR R P GVP IL
Sbjct: 1251 VASTLLGSVFVMIPLTSEEHQLLQDVQERLSLHPLTAPILGNDHAEFRRRGIPSGVPSIL 1310
Query: 420 DGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLERVHYALN 478
DGDML QFLELTS QQ+ V+ SS P I V QV+++LERVHYALN
Sbjct: 1311 DGDMLVQFLELTSEQQQTVID---------DGSSVKVPHRSISVFQVMRMLERVHYALN 1360
>gi|218199276|gb|EEC81703.1| hypothetical protein OsI_25307 [Oryza sativa Indica Group]
Length = 1429
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 258/552 (46%), Positives = 335/552 (60%), Gaps = 88/552 (15%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH KRLN +KF +GGTP+KVLYHS+SR L+V+RT L + +CSSDI +DP +G++LS F
Sbjct: 892 MVHGKRLNAQKFSIGGTPRKVLYHSDSRTLLVLRTGLTSVSCSSDIVQIDPSNGALLSRF 951
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQN-SD 119
K E GET K M++ ++G++QVL+VGTS S+G +MP+GEAES KGRLI+L +E +++ +
Sbjct: 952 KCEPGETAKCMQIAKIGNDQVLIVGTSKSNGRPMMPNGEAESIKGRLILLSLETIESPRE 1011
Query: 120 CGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRL 179
GS T S +SS SPF E VGYA E+LSS+S+CSSPD+ C+ I+ E LR
Sbjct: 1012 SGSFTAASNL-NSSHAGSPFPEFVGYAAEELSSNSMCSSPDEVCCNQIQ-PELMAGHLRS 1069
Query: 180 AYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH 239
T+ G VLA+ PYLDRY LA+AGN +V GF N++P R++++ RTRF I L +
Sbjct: 1070 LVQHTFNGAVLAVHPYLDRYVLAAAGNVLFVFGFLNESPHRIKKYTTSRTRFTITCLKTY 1129
Query: 240 FTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL 299
+RIAVGDCRDG+LFYSYHE+ RKLE IY DP+QRLV D L+ +TAVVSDR+GSI+VL
Sbjct: 1130 ASRIAVGDCRDGVLFYSYHENLRKLELIYSDPAQRLVGDVALLSCETAVVSDRRGSISVL 1189
Query: 300 S-----------------CSDRLEDNA----------SPECNLTP-NCAYHMGEIAVSIR 331
S CS + + A + C L P C GE + ++R
Sbjct: 1190 SCPRLEVSESPEKNLAVHCSGYMGETAMSIQKRWRLRNNTCWLLPLGCWLLRGEASSAVR 1249
Query: 332 KG---------------------------------------------SFIYKLPADDALG 346
K +F + LP DD
Sbjct: 1250 KSRQWGRRLVGVAMAASSVVVAAAKRRDGGAKRRDGAARWWRYETAVAFKHWLPIDDLTE 1309
Query: 347 DCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEF 406
L ES ++ASTLLGSI + IP++SEE+++L+ VQ RL++HPLTAPLLGNDH+EF
Sbjct: 1310 PVL---ESVYNCVVASTLLGSIFVMIPLTSEEHQMLQDVQERLSVHPLTAPLLGNDHAEF 1366
Query: 407 RSRENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQV 466
R R P GVP ILDGDML QFLELTS QQ VL+ S I V QV
Sbjct: 1367 RRRGIPSGVPPILDGDMLVQFLELTSEQQHDVLNIV---------SPGKKRQHDISVFQV 1417
Query: 467 VQLLERVHYALN 478
++ LERVHYALN
Sbjct: 1418 MRALERVHYALN 1429
>gi|224088148|ref|XP_002308344.1| predicted protein [Populus trichocarpa]
gi|222854320|gb|EEE91867.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/260 (84%), Positives = 243/260 (93%), Gaps = 3/260 (1%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTEL--NNDTCSSDICCVDPLSGSVLS 58
MVH+ RLNV+KFHLGGTP+KV YHSES+LL+VMRTEL +NDTCSSDICCVDPLSGS +S
Sbjct: 7 MVHSTRLNVQKFHLGGTPRKVQYHSESKLLLVMRTELSNDNDTCSSDICCVDPLSGSTVS 66
Query: 59 SFKLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNS 118
SFKLE GETGKSMELV++G+EQVLV+GTSLSSGPAIMPSGEAESTKGR+IVLC+E++QNS
Sbjct: 67 SFKLERGETGKSMELVKIGNEQVLVIGTSLSSGPAIMPSGEAESTKGRVIVLCLENLQNS 126
Query: 119 DCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLR 178
D GSMTFCSKAGSSSQRTSPFREIVGYA EQLSSSSLCSSPDD SCDG+KLEETETWQLR
Sbjct: 127 DSGSMTFCSKAGSSSQRTSPFREIVGYAAEQLSSSSLCSSPDDTSCDGVKLEETETWQLR 186
Query: 179 LAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTA 238
+TT PGMVLAICPYLDR+FLASAGN+FYVCGF NDN +RV++FAVGRTRFMIM LTA
Sbjct: 187 FVSATTLPGMVLAICPYLDRFFLASAGNSFYVCGFANDN-KRVKKFAVGRTRFMIMSLTA 245
Query: 239 HFTRIAVGDCRDGILFYSYH 258
+ TRIAVGDCRDGILFY+YH
Sbjct: 246 YHTRIAVGDCRDGILFYAYH 265
>gi|168031491|ref|XP_001768254.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680432|gb|EDQ66868.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1391
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 227/494 (45%), Positives = 310/494 (62%), Gaps = 31/494 (6%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDT-CSSDICCVDPLSGSVLSS 59
M H KRLNV+K LG TP++VLYH+ES+ LIVMRT+ D SD+CCVDPLSG+ S
Sbjct: 913 MEHLKRLNVQKLPLGRTPRRVLYHTESKTLIVMRTDYGPDGGLVSDVCCVDPLSGANYSC 972
Query: 60 FKLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSD 119
+ L+ GE +S++L + EQ+L+VGTSL G IM SGEAES KGRL+V +
Sbjct: 973 YTLDAGEVARSIQLWKRRQEQLLLVGTSLIGGGGIMSSGEAESAKGRLLVFQL------- 1025
Query: 120 CGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRL 179
G+ SQ + + SS + D L + E W+LRL
Sbjct: 1026 -----LSKHVGTHSQPVMSSTNTPTLSNQSTPGSSAADPMVLSESDESDLTDGEGWELRL 1080
Query: 180 AYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH 239
PG VL++ YL +Y LASAGN + GF D+PQR+RR A+ +TRFMI L+ H
Sbjct: 1081 KTHIILPGAVLSVSSYLGQYVLASAGNCLFCLGFRPDSPQRLRRMAMVKTRFMITSLSVH 1140
Query: 240 FTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL 299
+RIAVGDCRDGILFY+Y E + +LE +YC Q+LVADCVLMD DTAVV+DR+G+
Sbjct: 1141 LSRIAVGDCRDGILFYTYQEVSGQLELLYCGGIQQLVADCVLMDTDTAVVTDRRGNFCTF 1200
Query: 300 SCSDRLE--------DNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCL-- 349
S + E ++ SPE NL+ C YH+GE + I K SF Y+ PA++++ +C
Sbjct: 1201 SSASTPEGDLNFFFAESVSPERNLSLGCWYHIGETLMRIHKASFAYESPAEESMKNCGSN 1260
Query: 350 -ASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRS 408
A + ++++AS+LLGS+ IFI ++ EEY+LL+AVQ+RLA +P+T PLLGN+H ++R
Sbjct: 1261 DAIAHPTHSSVVASSLLGSVFIFIKVTREEYDLLKAVQSRLAHYPITTPLLGNNHEDYRG 1320
Query: 409 RENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSS----PIPVN 464
+ P GV ++LDGDML QFLELTS QQE VL+ G + S P SS + V+
Sbjct: 1321 QGCPAGVCQVLDGDMLCQFLELTSAQQENVLTEPQG---VVSLSVPNPGSSFLERSLAVD 1377
Query: 465 QVVQLLERVHYALN 478
+V++LLERVH +L+
Sbjct: 1378 RVLRLLERVHNSLS 1391
>gi|302820387|ref|XP_002991861.1| hypothetical protein SELMODRAFT_448595 [Selaginella moellendorffii]
gi|300140399|gb|EFJ07123.1| hypothetical protein SELMODRAFT_448595 [Selaginella moellendorffii]
Length = 1292
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 195/494 (39%), Positives = 290/494 (58%), Gaps = 54/494 (10%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
M ++ LNV+K HLG T ++VLYH ES +LIV+R + SD+CC++PLSG+VL
Sbjct: 837 MEQSRTLNVQKLHLGCTGRRVLYHPESGVLIVLRLLSEH---RSDVCCIEPLSGAVLCVH 893
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAE---------STKGRLIVLC 111
+ + K MEL+++G EQ+L+VGT+ S A+M +GEAE S++G L+VL
Sbjct: 894 PFGVEQIVKCMELMKLGDEQLLLVGTASDSRRAVMTTGEAERQAFYFLFSSSRGVLVVLY 953
Query: 112 IEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEE 171
++ S + SS + +S+ PDD
Sbjct: 954 LDAPPPPSPRSPMSSPTSESSGR------------------ASIVFQPDD---------- 985
Query: 172 TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFP--NDNPQRVRRFAVGRT 229
+ + PG V A+ YL +Y LA AGN + G +++P+R ++ A +T
Sbjct: 986 ---YCFVPRANVGLPGPVNAVASYLGQYVLACAGNHLFCLGIASMDESPRRWKKLASIKT 1042
Query: 230 RFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVV 289
RF+I ++ FT IAVGDCRDG+L ++Y ED++KLE I CDP +RLV+DC L+DVDTAVV
Sbjct: 1043 RFVITSISVRFTTIAVGDCRDGVLLFTYREDSKKLEPIRCDPMRRLVSDCTLVDVDTAVV 1102
Query: 290 SDRKGSIAVLSCSDRLE-----DNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDA 344
DR+G+ LS ++ E ++ SPE NL +C +H+GE+ ++RKGSF +K D
Sbjct: 1103 VDRQGNFCALSANEETEGKCDSNSGSPEKNLEAHCWFHIGEVCTTVRKGSFAFKAVEDSC 1162
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHS 404
D L ++ +IA+TLLGS+ IF+ ++ EEY LL+A+Q RL++ P TAP+LGNDH+
Sbjct: 1163 SVDRLIP-NMGKSCVIATTLLGSVFIFVRMTGEEYSLLQALQRRLSVLPATAPVLGNDHA 1221
Query: 405 EFRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVN 464
FR + P GV ++LDGD+L QFLELTS +Q AVL G K+ P + V
Sbjct: 1222 RFRGQGRPAGVKEVLDGDLLEQFLELTSAEQVAVLK-EPGPMVLRKSGGAYSPE--LQVE 1278
Query: 465 QVVQLLERVHYALN 478
+V++LLE++H+ +
Sbjct: 1279 RVLRLLEKIHHTVT 1292
>gi|302822731|ref|XP_002993022.1| hypothetical protein SELMODRAFT_136264 [Selaginella moellendorffii]
gi|300139222|gb|EFJ05968.1| hypothetical protein SELMODRAFT_136264 [Selaginella moellendorffii]
Length = 1277
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 193/480 (40%), Positives = 281/480 (58%), Gaps = 30/480 (6%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
M ++ LNV+K LG T ++VLYH ES +LIV+R + SD+CC++PLSG+VL
Sbjct: 826 MEQSRTLNVQKLRLGCTGRRVLYHPESGVLIVLRLLSEH---RSDVCCIEPLSGAVLCVH 882
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDC 120
+G+ K MEL+++G EQ+L+VGT+ + A+M +GEAE V + +S
Sbjct: 883 PFGVGQIVKCMELMKLGDEQLLLVGTASDTRRAVMATGEAERQAFYFCVSNTGYFPSSSR 942
Query: 121 GSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLA 180
G + + SP + A+E +S+ PDD +
Sbjct: 943 GVLVVLYL--DAPPPPSPHSPMSSPASESSGGASIVFQPDD-------------YCFVPR 987
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFP--NDNPQRVRRFAVGRTRFMIMLLTA 238
+ PG V A+ YL +Y LA AGN + G +++P+R ++ A +TRF+I ++
Sbjct: 988 ANVGLPGPVNAVASYLGQYVLACAGNHLFCLGIASMDESPRRWKKLASIKTRFVITSISV 1047
Query: 239 HFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAV 298
FT IAVGDCRDG+L ++Y ED++KLE I CDP +RLV+DC L+DVDTAVV DR G+
Sbjct: 1048 RFTTIAVGDCRDGVLLFTYREDSKKLEPIRCDPMRRLVSDCTLVDVDTAVVVDRHGNFCA 1107
Query: 299 LSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTT 358
LS ++ E N SPE NL +C +H+GE+ ++RK L D S E S +
Sbjct: 1108 LSTNEETEGNGSPEKNLEAHCWFHIGEVCTTVRKVRTSRFLCKD-------TSRECSVSC 1160
Query: 359 IIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKI 418
+IA+TLLGS+ IF+ I+ EEY LL+A+Q RL+ P TAP+LGNDH+ FR + P GV ++
Sbjct: 1161 VIATTLLGSVFIFVRITGEEYSLLQALQRRLSFLPATAPVLGNDHARFRGQGRPAGVKEV 1220
Query: 419 LDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLERVHYALN 478
LDGD+L QFLELTS +Q AVL G K+ P + V +V++LLE++H+ +
Sbjct: 1221 LDGDLLEQFLELTSAEQVAVLK-EPGPMVLRKSGGAYSPE--LQVERVLRLLEKIHHTVT 1277
>gi|147855335|emb|CAN83881.1| hypothetical protein VITISV_003998 [Vitis vinifera]
Length = 150
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/150 (60%), Positives = 113/150 (75%), Gaps = 6/150 (4%)
Query: 282 MDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPA 341
MDVDT VVSB KGSI VLSCS+ LEDNASP+ NLT C+Y+ G+ ++SI+KGSF Y+LP
Sbjct: 1 MDVDTXVVSBCKGSIVVLSCSNHLEDNASPKXNLTLXCSYYXGKTSMSIKKGSFSYELPT 60
Query: 342 DDALGDCLAS---FESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPL 398
DD L C S + S+ +I+ TLL SI++FIPIS EE+ELLE VQARL +H LT +
Sbjct: 61 DDVLKGCAGSKTIIDXSENSIMVGTLLRSIIMFIPISREEHELLEVVQARLVVHQLTTSI 120
Query: 399 LGNDHSEFRSRENPV---GVPKILDGDMLS 425
LGNDH+EF+S EN V GV KILDGDML+
Sbjct: 121 LGNDHNEFQSCENSVRKAGVSKILDGDMLA 150
>gi|449526686|ref|XP_004170344.1| PREDICTED: uncharacterized protein LOC101227016, partial [Cucumis
sativus]
Length = 997
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 87/101 (86%), Positives = 95/101 (94%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSF 60
MVH KRLNV+KFHLGGTP+KVLYHSES+LL+VMRT+L NDT SSDICCVDPLSGS+LSS
Sbjct: 897 MVHTKRLNVQKFHLGGTPRKVLYHSESKLLLVMRTQLINDTSSSDICCVDPLSGSILSSH 956
Query: 61 KLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAE 101
KLE+GETGKSMELVR G+EQVLVVGTSLSSGPAIM SGEAE
Sbjct: 957 KLEIGETGKSMELVRNGNEQVLVVGTSLSSGPAIMASGEAE 997
>gi|255590114|ref|XP_002535175.1| hypothetical protein RCOM_2050800 [Ricinus communis]
gi|223523827|gb|EEF27208.1| hypothetical protein RCOM_2050800 [Ricinus communis]
Length = 94
Score = 147 bits (372), Expect = 1e-32, Method: Composition-based stats.
Identities = 72/92 (78%), Positives = 78/92 (84%), Gaps = 1/92 (1%)
Query: 387 ARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGSF 446
ARL +HPLTAP+LGNDHSEFRSRENPVG PKILDGD+L+QFLELTS QQEA+LS LG
Sbjct: 4 ARLVVHPLTAPILGNDHSEFRSRENPVGAPKILDGDVLAQFLELTSAQQEAILSLPLGLL 63
Query: 447 DTIKASSKLPPSSPIPVNQVVQLLERVHYALN 478
DT+K K P PIPVNQVVQLLERVHYALN
Sbjct: 64 DTVKKGLK-PLPLPIPVNQVVQLLERVHYALN 94
>gi|449516353|ref|XP_004165211.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus]
Length = 158
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/122 (67%), Positives = 99/122 (81%), Gaps = 4/122 (3%)
Query: 360 IASTLLGSIVIFI---PISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVP 416
+ S L GSI + I +EYELLEAVQA+LA+HPLT+P+LGNDH E+RSRENP+GVP
Sbjct: 38 LPSILCGSISLIIFSFWFFRDEYELLEAVQAKLAVHPLTSPILGNDHYEYRSRENPIGVP 97
Query: 417 KILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLERVHYA 476
KILDGD+L+QFLELTS QQE VLS ++GS +K SSK P+S IP+NQVVQLLER+HYA
Sbjct: 98 KILDGDILTQFLELTSMQQELVLSSSVGSLSAVKPSSKSMPAS-IPINQVVQLLERIHYA 156
Query: 477 LN 478
LN
Sbjct: 157 LN 158
>gi|147777738|emb|CAN75738.1| hypothetical protein VITISV_025903 [Vitis vinifera]
Length = 501
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/123 (59%), Positives = 82/123 (66%), Gaps = 28/123 (22%)
Query: 384 AVQARLAIHPLTAPLLGNDHSEFRSRENPV----------------------------GV 415
AVQARLA+H LTAP+LGNDH+EFRSREN V GV
Sbjct: 379 AVQARLAVHQLTAPILGNDHNEFRSRENSVRKVWDVGWYGNIFRLWGRVGNLSSTSHAGV 438
Query: 416 PKILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLERVHY 475
KILDGDML+QFLELTS QQEAVL+ LGS +T+ +SSK SPI VN+VVQLLERVHY
Sbjct: 439 SKILDGDMLAQFLELTSMQQEAVLALPLGSLETVTSSSKQTLLSPISVNRVVQLLERVHY 498
Query: 476 ALN 478
ALN
Sbjct: 499 ALN 501
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 326 IAVSIRKGSFIYKLPADDALGDCLAS---FESSQTTIIASTLLGSIVIFIPIS 375
+A ++ GSF YKLPADD L C S + S+ +I+A TLLGSI++ IPIS
Sbjct: 1 MARALFLGSFSYKLPADDVLKGCDGSNTIIDFSENSIMAGTLLGSIIMLIPIS 53
>gi|156084934|ref|XP_001609950.1| splicing factor 3b, subunit 3, 130kD [Babesia bovis T2Bo]
gi|154797202|gb|EDO06382.1| splicing factor 3b, subunit 3, 130kD, putative [Babesia bovis]
Length = 1169
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 123/281 (43%), Gaps = 54/281 (19%)
Query: 174 TWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMI 233
+++RL + T G+V A Y R LAS G +R+R +A+G+ + ++
Sbjct: 904 NFEIRLLHVTRVGGVVRAFTGYEGR-LLASVG-------------KRIRLYALGKKQLLL 949
Query: 234 ------------MLLTAHFTRIAVGDCRDGILFYS---YHEDARKLEQIYCDPSQRLVAD 278
+ L A +RI GD R+GI Y E+A + E + R +
Sbjct: 950 KAEHRTCSDHGFIWLNAVGSRIFAGDIREGIQILRIKFYSEEAAEFEWVGGATGPRWLTS 1009
Query: 279 CVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYK 338
C +D T + D+ SI V ++ ++ L C +H+G++ ++ K
Sbjct: 1010 CAQLDYSTVIAGDKFDSIFVTRVP---QEESTRHIQLENVCQFHLGDLPTAMDK------ 1060
Query: 339 LPADDALGDCLASFESSQTTIIASTLLGSIVIFIPI-SSEEYELLEAVQARLAIHPLTAP 397
A+ S ++ T++GSI +P S +E + L+ ++ +A P
Sbjct: 1061 -----------AALSQSTHVVLYGTVMGSIGALVPFQSKDELDFLQHLEMLMATE--APP 1107
Query: 398 LLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
L G +HS +RS PV +++DGD+ QF LT QQ V
Sbjct: 1108 LCGREHSFYRSYYVPV--QQVVDGDLCEQFRHLTEAQQRKV 1146
>gi|330790247|ref|XP_003283209.1| CPSF domain-containing protein [Dictyostelium purpureum]
gi|325086890|gb|EGC40273.1| CPSF domain-containing protein [Dictyostelium purpureum]
Length = 1233
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 181/447 (40%), Gaps = 33/447 (7%)
Query: 7 LNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGE 66
N LG TP++ + H ++ +I + TE N +T DI ++ + K E+ E
Sbjct: 781 FNQETIKLGATPRRFIVHPQTNYIITLETETNYNTEQIDIEKINAERQAEYEKKKQEIQE 840
Query: 67 TGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIE---------HMQN 117
+ ++ G P + +A + R I+ I+ + +
Sbjct: 841 NMDMDMDMDDNNDDANTDGQI--KKPKFIYKPKAGRGQWRSIIKIIDPISHQVYESYQLD 898
Query: 118 SDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQL 177
+ + C+ + S F +VG + + C S AS + K E E +L
Sbjct: 899 ENEAGFSLCTLSFSDRGDGEIFL-VVGCGNNVILNPKSCES---ASINLYKFTE-EGKKL 953
Query: 178 RLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLT 237
+L Y T V A+ P+ R A G + + + +R+ I+ +
Sbjct: 954 QLVYKTEAEEPVYAMAPFQGR-LCAGVGKNIRI--YDMGKKKLLRKCETKNLPNTIVNIH 1010
Query: 238 AHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIA 297
+ R+ VGD ++ I F Y + L D + R + V++D DT +D+ G+I
Sbjct: 1011 SLGDRLVVGDIQESIHFIKYKKLENMLYVFADDLAPRWITSSVMLDYDTVAGADKFGNIF 1070
Query: 298 VLSCSDRLEDNASPECNLTP---NCAYHMGEIAVSIRKGSFIYKLPADDALG--DCLASF 352
+L RL N S E P + G + + K I + A DA+ + +
Sbjct: 1071 IL----RLPSNVSDEVEEDPTGSKLKFESGLLNGAPHKLEHIANIFAGDAITTLNKTSLV 1126
Query: 353 ESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSREN 411
++ +T+ G+I IP +S E+ + +++ L + APL G DH +RS
Sbjct: 1127 VGGSDVLLYTTISGAIGALIPFVSREDVDFFSSLE--LQLRNEHAPLCGRDHLAYRSYYF 1184
Query: 412 PVGVPKILDGDMLSQFLELTSTQQEAV 438
P V I+DGD+ QF+ L +Q +
Sbjct: 1185 P--VKNIIDGDLCEQFITLDPQKQRQI 1209
>gi|321478392|gb|EFX89349.1| hypothetical protein DAPPUDRAFT_303178 [Daphnia pulex]
Length = 1215
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 40/216 (18%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ I F Y +L D R V L+D DT V+D+ G+I+VL
Sbjct: 997 RVYVADVQESIHFVRYKRMENQLIIFADDTHPRYVTTMCLLDYDTVAVADKFGNISVLRL 1056
Query: 302 SDRLEDNASPE------------CNLTPN-----CAYHMGEIAVSIRKGSFIYKLPADDA 344
R D+ + N N C H+GE A+S+++ + I
Sbjct: 1057 PSRTSDDVDEDPTGNKSFWDRGVLNGASNKAEVLCNIHIGETALSLQRATLI-------- 1108
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPLLGND 402
+++ +TL GSI + +P +S E+++ +A++ L + HP PL G D
Sbjct: 1109 --------PGGSESLVYTTLSGSIGVLVPFTSREDHDFFQALEMHLRSEHP---PLCGRD 1157
Query: 403 HSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
H FRS P V ++DGD+ QF + S++Q+AV
Sbjct: 1158 HLAFRSFYFP--VKNVIDGDLCEQFNSIDSSKQKAV 1191
>gi|17861814|gb|AAL39384.1| GM01240p [Drosophila melanogaster]
gi|220943184|gb|ACL84135.1| CG13900-PB [synthetic construct]
Length = 688
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 116/266 (43%), Gaps = 41/266 (15%)
Query: 191 AICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRD 250
A+C + R LA G + F + +R+ + I+ + A R+ V D ++
Sbjct: 422 ALCGFQGR-LLAGCGRMLRIYDF--GKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQE 478
Query: 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNAS 310
+ F Y +L D R V L+D DT ++D+ G++++ + D+
Sbjct: 479 SVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVD 538
Query: 311 PECNLTPN-----------------CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
+ T + C++H+GEI +S++K + I
Sbjct: 539 EDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI----------------P 582
Query: 354 SSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+I +TL G++ F+P +S E+Y+ + ++ + + PL G DH +RS P
Sbjct: 583 GGSEALIYATLSGTVGAFVPFTSREDYDFFQHLE--MHMRNENPPLCGRDHLSYRSSYYP 640
Query: 413 VGVPKILDGDMLSQFLELTSTQQEAV 438
V +LDGD+ Q+L + + +Q+++
Sbjct: 641 --VKNVLDGDLCEQYLSIEAAKQKSI 664
>gi|195586770|ref|XP_002083143.1| GD13507 [Drosophila simulans]
gi|194195152|gb|EDX08728.1| GD13507 [Drosophila simulans]
Length = 1227
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 116/266 (43%), Gaps = 41/266 (15%)
Query: 191 AICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRD 250
A+C + R LA G + F + +R+ + I+ + A R+ V D ++
Sbjct: 961 ALCGFQGR-LLAGCGRMLRIYDF--GKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQE 1017
Query: 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNAS 310
+ F Y +L D R V L+D DT ++D+ G++++ + D+
Sbjct: 1018 SVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVD 1077
Query: 311 PECNLTPN-----------------CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
+ T + C++H+GEI +S++K + I
Sbjct: 1078 EDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI----------------P 1121
Query: 354 SSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+I +TL G++ F+P +S E+Y+ + ++ + + PL G DH +RS P
Sbjct: 1122 GGSEALIYATLSGTVGAFVPFTSREDYDFFQHLE--MHMRNENPPLCGRDHLSYRSSYYP 1179
Query: 413 VGVPKILDGDMLSQFLELTSTQQEAV 438
V +LDGD+ Q+L + + +Q+++
Sbjct: 1180 --VKNVLDGDLCEQYLSIEAAKQKSI 1203
>gi|194864680|ref|XP_001971056.1| GG14635 [Drosophila erecta]
gi|190652839|gb|EDV50082.1| GG14635 [Drosophila erecta]
Length = 1227
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 116/266 (43%), Gaps = 41/266 (15%)
Query: 191 AICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRD 250
A+C + R LA G + F + +R+ + I+ + A R+ V D ++
Sbjct: 961 ALCGFQGR-LLAGCGRMLRIYDF--GKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQE 1017
Query: 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNAS 310
+ F Y +L D R V L+D DT ++D+ G++++ + D+
Sbjct: 1018 SVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVD 1077
Query: 311 PECNLTPN-----------------CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
+ T + C++H+GEI +S++K + I
Sbjct: 1078 EDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI----------------P 1121
Query: 354 SSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+I +TL G++ F+P +S E+Y+ + ++ + + PL G DH +RS P
Sbjct: 1122 GGSEALIYATLSGTVGAFVPFTSREDYDFFQHLE--MHMRNENPPLCGRDHLSYRSSYYP 1179
Query: 413 VGVPKILDGDMLSQFLELTSTQQEAV 438
V +LDGD+ Q+L + + +Q+++
Sbjct: 1180 --VKNVLDGDLCEQYLSIEAAKQKSI 1203
>gi|195490209|ref|XP_002093045.1| GE20993 [Drosophila yakuba]
gi|194179146|gb|EDW92757.1| GE20993 [Drosophila yakuba]
Length = 1227
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 116/266 (43%), Gaps = 41/266 (15%)
Query: 191 AICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRD 250
A+C + R LA G + F + +R+ + I+ + A R+ V D ++
Sbjct: 961 ALCGFQGR-LLAGCGRMLRIYDF--GKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQE 1017
Query: 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNAS 310
+ F Y +L D R V L+D DT ++D+ G++++ + D+
Sbjct: 1018 SVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVD 1077
Query: 311 PECNLTPN-----------------CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
+ T + C++H+GEI +S++K + I
Sbjct: 1078 EDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI----------------P 1121
Query: 354 SSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+I +TL G++ F+P +S E+Y+ + ++ + + PL G DH +RS P
Sbjct: 1122 GGSEALIYATLSGTVGAFVPFTSREDYDFFQHLE--MHMRNENPPLCGRDHLSYRSSYYP 1179
Query: 413 VGVPKILDGDMLSQFLELTSTQQEAV 438
V +LDGD+ Q+L + + +Q+++
Sbjct: 1180 --VKNVLDGDLCEQYLSIEAAKQKSI 1203
>gi|195336406|ref|XP_002034829.1| GM14250 [Drosophila sechellia]
gi|194127922|gb|EDW49965.1| GM14250 [Drosophila sechellia]
Length = 1227
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 116/266 (43%), Gaps = 41/266 (15%)
Query: 191 AICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRD 250
A+C + R LA G + F + +R+ + I+ + A R+ V D ++
Sbjct: 961 ALCGFQGR-LLAGCGRMLRIYDF--GKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQE 1017
Query: 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNAS 310
+ F Y +L D R V L+D DT ++D+ G++++ + D+
Sbjct: 1018 SVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVD 1077
Query: 311 PECNLTPN-----------------CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
+ T + C++H+GEI +S++K + I
Sbjct: 1078 EDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI----------------P 1121
Query: 354 SSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+I +TL G++ F+P +S E+Y+ + ++ + + PL G DH +RS P
Sbjct: 1122 GGSEALIYATLSGTVGAFVPFTSREDYDFFQHLE--MHMRNENPPLCGRDHLSYRSSYYP 1179
Query: 413 VGVPKILDGDMLSQFLELTSTQQEAV 438
V +LDGD+ Q+L + + +Q+++
Sbjct: 1180 --VKNVLDGDLCEQYLSIEAAKQKSI 1203
>gi|60677959|gb|AAX33486.1| RE01065p [Drosophila melanogaster]
Length = 1227
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 116/266 (43%), Gaps = 41/266 (15%)
Query: 191 AICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRD 250
A+C + R LA G + F + +R+ + I+ + A R+ V D ++
Sbjct: 961 ALCGFQGR-LLAGCGRMLRIYDF--GKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQE 1017
Query: 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNAS 310
+ F Y +L D R V L+D DT ++D+ G++++ + D+
Sbjct: 1018 SVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVD 1077
Query: 311 PECNLTPN-----------------CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
+ T + C++H+GEI +S++K + I
Sbjct: 1078 EDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI----------------P 1121
Query: 354 SSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+I +TL G++ F+P +S E+Y+ + ++ + + PL G DH +RS P
Sbjct: 1122 GGSEALIYATLSGTVGAFVPFTSREDYDFFQHLE--MHMRNENPPLCGRDHLSYRSSYYP 1179
Query: 413 VGVPKILDGDMLSQFLELTSTQQEAV 438
V +LDGD+ Q+L + + +Q+++
Sbjct: 1180 --VKNVLDGDLCEQYLSIEAAKQKSI 1203
>gi|24654874|ref|NP_728546.1| CG13900, isoform A [Drosophila melanogaster]
gi|23092721|gb|AAF47416.2| CG13900, isoform A [Drosophila melanogaster]
gi|60678131|gb|AAX33572.1| LD01809p [Drosophila melanogaster]
gi|220950356|gb|ACL87721.1| CG13900-PA [synthetic construct]
gi|289803030|gb|ADD20765.1| FI04459p [Drosophila melanogaster]
Length = 1227
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 116/266 (43%), Gaps = 41/266 (15%)
Query: 191 AICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRD 250
A+C + R LA G + F + +R+ + I+ + A R+ V D ++
Sbjct: 961 ALCGFQGR-LLAGCGRMLRIYDF--GKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQE 1017
Query: 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNAS 310
+ F Y +L D R V L+D DT ++D+ G++++ + D+
Sbjct: 1018 SVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVD 1077
Query: 311 PECNLTPN-----------------CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
+ T + C++H+GEI +S++K + I
Sbjct: 1078 EDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI----------------P 1121
Query: 354 SSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+I +TL G++ F+P +S E+Y+ + ++ + + PL G DH +RS P
Sbjct: 1122 GGSEALIYATLSGTVGAFVPFTSREDYDFFQHLE--MHMRNENPPLCGRDHLSYRSSYYP 1179
Query: 413 VGVPKILDGDMLSQFLELTSTQQEAV 438
V +LDGD+ Q+L + + +Q+++
Sbjct: 1180 --VKNVLDGDLCEQYLSIEAAKQKSI 1203
>gi|195996829|ref|XP_002108283.1| hypothetical protein TRIADDRAFT_49802 [Trichoplax adhaerens]
gi|190589059|gb|EDV29081.1| hypothetical protein TRIADDRAFT_49802 [Trichoplax adhaerens]
Length = 1208
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 42/228 (18%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
+ I+ +++ +R+ VGD ++ + F Y +L D S R V +D DT V
Sbjct: 979 YRIVTISSMGSRVIVGDVQESVHFVKYRAKENRLVVFADDVSPRYVTATCFLDYDTIAVG 1038
Query: 291 DRKGSIAVLSCSDRLED-------------------NASPECNLTPNCAYHMGEIAVSIR 331
D+ GSIA+L SD + D AS + NL ++++GE +S++
Sbjct: 1039 DKFGSIAILRLSDDINDEIEEDPTGAKAFWDRGLLNGASQKANL--EASFYIGETVMSLQ 1096
Query: 332 KGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLA 390
K + I ++I +TL GSI + +P +S EE + + ++ L
Sbjct: 1097 KTTII----------------PGGSESLIYTTLSGSIGVLLPFTSREEVDFFQHLEMHL- 1139
Query: 391 IHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
AP+ G DH +RS P ++DGDM QF L +++ +
Sbjct: 1140 -RSENAPICGRDHLAYRSYYFP--AKNVIDGDMCEQFNALDGSKRRTL 1184
>gi|195012560|ref|XP_001983703.1| GH16029 [Drosophila grimshawi]
gi|193897185|gb|EDV96051.1| GH16029 [Drosophila grimshawi]
Length = 1228
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 117/266 (43%), Gaps = 41/266 (15%)
Query: 191 AICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRD 250
A+C + R LA G + + + +R+ + I+ + A R+ V D ++
Sbjct: 962 ALCGFQGR-LLAGCGRMLRI--YDLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQE 1018
Query: 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNAS 310
+ F Y +L D R V L+D DT ++D+ G++++ + D+
Sbjct: 1019 SVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVD 1078
Query: 311 PECNLTPN-----------------CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
+ T + C++H+GEI +S++K + I
Sbjct: 1079 EDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI----------------P 1122
Query: 354 SSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+I STL G++ F+P +S E+Y+ + ++ + + PL G DH +RS P
Sbjct: 1123 GGSEALIYSTLSGTVGAFVPFTSREDYDFFQHLE--MHMRNENPPLCGRDHLSYRSSYYP 1180
Query: 413 VGVPKILDGDMLSQFLELTSTQQEAV 438
V +LDGD+ Q+L + +++Q+++
Sbjct: 1181 --VKNVLDGDLCEQYLSVDASKQKSI 1204
>gi|195169735|ref|XP_002025674.1| GL20829 [Drosophila persimilis]
gi|194109167|gb|EDW31210.1| GL20829 [Drosophila persimilis]
Length = 1225
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 116/266 (43%), Gaps = 41/266 (15%)
Query: 191 AICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRD 250
A+C + R LA G + + + +R+ + I+ + A R+ V D ++
Sbjct: 959 ALCGFQGR-LLAGCGRMLRI--YDLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQE 1015
Query: 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNAS 310
+ F Y +L D R V L+D DT ++D+ G++++ + D+
Sbjct: 1016 SVFFLRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVD 1075
Query: 311 PECNLTPN-----------------CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
+ T + C++H+GEI +S++K + I
Sbjct: 1076 EDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI----------------P 1119
Query: 354 SSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+I STL G++ F+P +S E+Y+ + ++ + + PL G DH +RS P
Sbjct: 1120 GGSEALIYSTLNGTVGAFVPFTSREDYDFFQHLE--MHMRNENPPLCGRDHLSYRSSYYP 1177
Query: 413 VGVPKILDGDMLSQFLELTSTQQEAV 438
V +LDGD+ Q+L + + +Q+++
Sbjct: 1178 --VKNVLDGDLCEQYLSIEAAKQKSI 1201
>gi|125977518|ref|XP_001352792.1| GA12611 [Drosophila pseudoobscura pseudoobscura]
gi|54641542|gb|EAL30292.1| GA12611 [Drosophila pseudoobscura pseudoobscura]
Length = 1228
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 116/266 (43%), Gaps = 41/266 (15%)
Query: 191 AICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRD 250
A+C + R LA G + + + +R+ + I+ + A R+ V D ++
Sbjct: 962 ALCGFQGR-LLAGCGRMLRI--YDLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQE 1018
Query: 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNAS 310
+ F Y +L D R V L+D DT ++D+ G++++ + D+
Sbjct: 1019 SVFFLRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVD 1078
Query: 311 PECNLTPN-----------------CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
+ T + C++H+GEI +S++K + I
Sbjct: 1079 EDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI----------------P 1122
Query: 354 SSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+I STL G++ F+P +S E+Y+ + ++ + + PL G DH +RS P
Sbjct: 1123 GGSEALIYSTLNGTVGAFVPFTSREDYDFFQHLE--MHMRNENPPLCGRDHLSYRSSYYP 1180
Query: 413 VGVPKILDGDMLSQFLELTSTQQEAV 438
V +LDGD+ Q+L + + +Q+++
Sbjct: 1181 --VKNVLDGDLCEQYLSIEAAKQKSI 1204
>gi|340721347|ref|XP_003399083.1| PREDICTED: splicing factor 3B subunit 3-like [Bombus terrestris]
gi|350406701|ref|XP_003487854.1| PREDICTED: splicing factor 3B subunit 3-like [Bombus impatiens]
Length = 1217
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 124/287 (43%), Gaps = 45/287 (15%)
Query: 172 TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRF 231
+E L L + TT + LAICPY R L G + + + +R+
Sbjct: 932 SECTNLELVHKTTLDEVPLAICPYQGR-VLVGVGRMLRL--YDMGKKKLLRKCENKHIPN 988
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
++ + A RI V D ++ + Y +L D R + ++D DT +D
Sbjct: 989 AVVSINAIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATAD 1048
Query: 292 RKGSIAVLSCSDRLED------------------NASPECNLTPNCAYHMGEIAVSIRKG 333
+ G+IAV+ + + D N + + T C +H+GE +S++K
Sbjct: 1049 KFGNIAVIRLASGINDDVDEDPTGNKALWDRGLLNGASQKADTVAC-FHVGETVMSLQKA 1107
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AI 391
+ I +++ +TL G++ + +P +S E+++ + ++ + +
Sbjct: 1108 TLI----------------PGGSESLVYTTLSGTVGVLVPFTSHEDHDFFQHLEMHMRSE 1151
Query: 392 HPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
HP PL G DH FRS P V ++DGD+ QF + T+Q+++
Sbjct: 1152 HP---PLCGRDHLSFRSYYYP--VKNVIDGDLCEQFNSIEPTKQKSI 1193
>gi|194749950|ref|XP_001957397.1| GF24063 [Drosophila ananassae]
gi|190624679|gb|EDV40203.1| GF24063 [Drosophila ananassae]
Length = 1228
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 117/266 (43%), Gaps = 41/266 (15%)
Query: 191 AICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRD 250
A+C + R LA G + + + +R+ + I+ + A R+ V D ++
Sbjct: 962 ALCGFQGR-LLAGCGRMLRI--YDLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQE 1018
Query: 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNAS 310
+ F Y +L D R V L+D DT ++D+ G++++ + D+
Sbjct: 1019 SVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVD 1078
Query: 311 PECNLTPN-----------------CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
+ T + C++H+GEI +S++K + I
Sbjct: 1079 EDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI----------------P 1122
Query: 354 SSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+I +TL G++ F+P +S E+Y+ + ++ + + PL G DH +RS P
Sbjct: 1123 GGSEALIYATLSGTVGAFVPFTSREDYDFFQHLE--MHMRNENPPLCGRDHLSYRSSYYP 1180
Query: 413 VGVPKILDGDMLSQFLELTSTQQEAV 438
V +LDGD+ Q+L + +++Q+++
Sbjct: 1181 V--KNVLDGDLCEQYLSIDASKQKSI 1204
>gi|383847297|ref|XP_003699291.1| PREDICTED: splicing factor 3B subunit 3-like [Megachile rotundata]
Length = 1217
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 123/287 (42%), Gaps = 45/287 (15%)
Query: 172 TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRF 231
TE L L + TT + LAICPY R L G + + + +R+
Sbjct: 932 TECTSLELVHKTTLDEVPLAICPYQGR-VLVGVGRMLRL--YDMGKKKLLRKCENKHIPN 988
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
I+ + A RI V D ++ + Y +L D R + ++D DT +D
Sbjct: 989 AIVSINAIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATAD 1048
Query: 292 RKGSIAVLSCSDRLED------------------NASPECNLTPNCAYHMGEIAVSIRKG 333
+ G+IAV+ + + D N + + T C +H+GE +S++K
Sbjct: 1049 KFGNIAVIRLASGINDDVDEDPTGNKALWDRGLLNGASQKADTVAC-FHVGETVMSLQKA 1107
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AI 391
+ I +++ +TL G++ + +P +S E+++ + ++ + +
Sbjct: 1108 TLI----------------PGGSESLVYTTLSGTVGVLVPFTSHEDHDFFQHLEMHMRSE 1151
Query: 392 HPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
HP PL G DH FRS P V ++DGD+ QF + +Q+++
Sbjct: 1152 HP---PLCGRDHLSFRSYYYP--VKNVIDGDLCEQFNSIEPAKQKSI 1193
>gi|195126264|ref|XP_002007593.1| GI12293 [Drosophila mojavensis]
gi|193919202|gb|EDW18069.1| GI12293 [Drosophila mojavensis]
Length = 1227
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 116/266 (43%), Gaps = 41/266 (15%)
Query: 191 AICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRD 250
A+C + R LA G + + + +R+ + I+ + A R+ V D ++
Sbjct: 961 ALCGFQGR-LLAGCGRMLRI--YDLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQE 1017
Query: 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNAS 310
+ F Y +L D R V L+D DT ++D+ G++++ + D+
Sbjct: 1018 SVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVD 1077
Query: 311 PECNLTPN-----------------CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
+ T + C++H+GEI +S++K + I
Sbjct: 1078 EDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI----------------P 1121
Query: 354 SSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+I +TL G++ F+P +S E+Y+ + ++ + + PL G DH +RS P
Sbjct: 1122 GGSEALIYATLSGTVGAFVPFTSREDYDFFQHLE--MHMRNENPPLCGRDHLSYRSSYYP 1179
Query: 413 VGVPKILDGDMLSQFLELTSTQQEAV 438
V +LDGD+ Q+L + + +Q+++
Sbjct: 1180 --VKNVLDGDLCEQYLSIDAVKQKSI 1203
>gi|195428692|ref|XP_002062402.1| GK16677 [Drosophila willistoni]
gi|194158487|gb|EDW73388.1| GK16677 [Drosophila willistoni]
Length = 1273
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 116/266 (43%), Gaps = 41/266 (15%)
Query: 191 AICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRD 250
A+C + R LA G + + + +R+ + I+ + A R+ V D ++
Sbjct: 1007 ALCGFQGR-LLAGCGRMLRI--YDLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQE 1063
Query: 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNAS 310
+ F Y +L D R V L+D DT ++D+ G++++ + D+
Sbjct: 1064 SVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVD 1123
Query: 311 PECNLTPN-----------------CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
+ T + C++H+GEI +S++K + I
Sbjct: 1124 EDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI----------------P 1167
Query: 354 SSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+I +TL G++ F+P +S E+Y+ + ++ + + PL G DH +RS P
Sbjct: 1168 GGSEALIYATLSGTVGAFVPFTSREDYDFFQHLE--MHMRNENPPLCGRDHLSYRSSYYP 1225
Query: 413 VGVPKILDGDMLSQFLELTSTQQEAV 438
V +LDGD+ Q+L + + +Q+++
Sbjct: 1226 --VKNVLDGDLCEQYLSIDAVKQKSI 1249
>gi|195376606|ref|XP_002047087.1| GJ13230 [Drosophila virilis]
gi|194154245|gb|EDW69429.1| GJ13230 [Drosophila virilis]
Length = 1229
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 116/266 (43%), Gaps = 41/266 (15%)
Query: 191 AICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRD 250
A+C + R LA G + + + +R+ + I+ + A R+ V D ++
Sbjct: 963 ALCGFQGR-LLAGCGRMLRI--YDLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQE 1019
Query: 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNAS 310
+ F Y +L D R V L+D DT ++D+ G++++ + D+
Sbjct: 1020 SVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVD 1079
Query: 311 PECNLTPN-----------------CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
+ T + C++H+GEI +S++K + I
Sbjct: 1080 EDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI----------------P 1123
Query: 354 SSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+I +TL G++ F+P +S E+Y+ + ++ + + PL G DH +RS P
Sbjct: 1124 GGSEALIYATLSGTVGAFVPFTSREDYDFFQHLE--MHMRNENPPLCGRDHLSYRSSYYP 1181
Query: 413 VGVPKILDGDMLSQFLELTSTQQEAV 438
V +LDGD+ Q+L + + +Q+++
Sbjct: 1182 --VKNVLDGDLCEQYLSIDAVKQKSI 1205
>gi|229577321|ref|NP_001153352.1| splicing factor 3b, subunit 3 [Nasonia vitripennis]
Length = 1216
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 102/468 (21%), Positives = 184/468 (39%), Gaps = 84/468 (17%)
Query: 7 LNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSD-------ICCVDPLSGSVLSS 59
N F TP+K + H+ES ++++ TE N T + + +GS ++
Sbjct: 773 FNQVSFPFEYTPRKFVIHNESAHVLLIETEHNAYTEETKQQRRLQMAEEMQEAAGSDEAA 832
Query: 60 FKLELGETGKSMELVRVGHEQVL---VVGTSLSS------GPAIMPSGEAESTKGRLIVL 110
EL E S E +EQV G L + P + + + L L
Sbjct: 833 VARELAEAFLSEE----PNEQVFGAPRAGPGLWASLIRVMAPTTGTTFQVHRLEQNLAAL 888
Query: 111 CIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLE 170
C+ ++ ++ G F + + +P R G SS C+S
Sbjct: 889 CLALVKFANQGDQQFLIVGVAKEYQLNP-RISNGGFLYTYKVSSDCTS------------ 935
Query: 171 ETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTR 230
+ L + TT + LAICPY R L G + + + +R+
Sbjct: 936 ------IELMHRTTLDEIPLAICPYQGR-VLVGVGKMLRL--YDMGKKKLLRKCENKHIP 986
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
++ + A RI V D ++ + Y +L D R + ++D DT +
Sbjct: 987 NAVICINAIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATA 1046
Query: 291 DRKGSIAVLSCSDRLED------------------NASPECNLTPNCAYHMGEIAVSIRK 332
D+ G+IAV+ + + D N + + T C +H+GE +S++K
Sbjct: 1047 DKFGNIAVIRLASSINDDVDEDPTGNKALWDRGLLNGASQKADTVAC-FHVGETVMSLQK 1105
Query: 333 GSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-A 390
+ I +++ +TL G++ + +P +S E+++ + ++ + A
Sbjct: 1106 ATLI----------------PGGSESLVYTTLSGTVGVLVPFTSHEDHDFFQHLEMHMRA 1149
Query: 391 IHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
HP PL G DH FRS P V ++DGD+ QF + +Q+++
Sbjct: 1150 EHP---PLCGRDHLSFRSYYYP--VKNVIDGDLCEQFNSIEPGKQKSI 1192
>gi|31213215|ref|XP_315551.1| AGAP005549-PA [Anopheles gambiae str. PEST]
gi|21299714|gb|EAA11859.1| AGAP005549-PA [Anopheles gambiae str. PEST]
Length = 1217
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 122/288 (42%), Gaps = 41/288 (14%)
Query: 171 ETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTR 230
+++T QL + T A+CP+ R LA G + + + +R+
Sbjct: 931 DSQTHQLEHMHRTEIDDAPGALCPFQGR-LLAGIGKVLRI--YDLGKKKLLRKCENKHIP 987
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
I+ + R+ V D ++ + Y +L D R + L+D DT
Sbjct: 988 NQIVNIQGMGQRVYVSDVQESVYCIKYKRAENQLIIFADDTHPRWITSASLLDYDTVATG 1047
Query: 291 DRKGSIAVL----SCSDRLEDNASPECNLTPN-------------CAYHMGEIAVSIRKG 333
D+ G+IA+L S SD ++++ + L C +H+GEI +S++K
Sbjct: 1048 DKFGNIAILRLPHSVSDDVDEDPTGNKALWDRGLLNGASQKAENICTFHLGEIVMSLQKA 1107
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIH 392
+ I ++I +T+ G++ +P +S E+Y+ + ++ + +
Sbjct: 1108 TLI----------------PGGSESLIYATMSGTVGALVPFTSREDYDFFQHLE--MHMR 1149
Query: 393 PLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLS 440
PL G DH +RS P V ++DGD+ QF L +Q+++ S
Sbjct: 1150 NENPPLCGRDHLSYRSYYYP--VKNVMDGDLCEQFTSLDPAKQKSIAS 1195
>gi|66553024|ref|XP_623333.1| PREDICTED: splicing factor 3B subunit 3 isoform 1 [Apis mellifera]
gi|380015815|ref|XP_003691890.1| PREDICTED: splicing factor 3B subunit 3-like [Apis florea]
Length = 1217
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 124/289 (42%), Gaps = 45/289 (15%)
Query: 172 TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRF 231
+E L L + TT + LAICPY R L G + + + +R+
Sbjct: 932 SECTNLELVHKTTLDEVPLAICPYQGR-VLVGVGRMLRL--YDMGKKKLLRKCENKHIPN 988
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
++ + A RI V D ++ + Y +L D R + ++D DT +D
Sbjct: 989 AVVSINAIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATAD 1048
Query: 292 RKGSIAVLSCSDRLED------------------NASPECNLTPNCAYHMGEIAVSIRKG 333
+ G+IAV+ + + D N + + T C +H+GE +S++K
Sbjct: 1049 KFGNIAVIRLASGINDDVDEDPTGNKALWDRGLLNGASQKADTVAC-FHVGETVMSLQKA 1107
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AI 391
+ I +++ +TL G++ + +P +S E+++ + ++ + +
Sbjct: 1108 TLI----------------PGGSESLVYTTLSGTVGVLVPFTSHEDHDFFQHLEMHMRSE 1151
Query: 392 HPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLS 440
HP PL G DH FRS P + ++DGD+ QF + +Q+++ S
Sbjct: 1152 HP---PLCGRDHLSFRSYYYP--IKNVIDGDLCEQFNSIEPAKQKSISS 1195
>gi|328872326|gb|EGG20693.1| hypothetical protein DFA_00554 [Dictyostelium fasciculatum]
Length = 1355
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 127/316 (40%), Gaps = 26/316 (8%)
Query: 140 REIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLAYSTTWPGMVLAICPYLDRY 199
+ ++ Y E +SS ++ A I L+E + + P + +I P D
Sbjct: 1020 KNLIIYGGESNQNSSTRNNRGIAYFLNIHLQEVDIGITEFK-TLQQPIPINSIVPLSDGN 1078
Query: 200 FLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHE 259
+ S N + N + + + + R+ G +DG+ Y+Y+
Sbjct: 1079 IIVSTSNETTILDIANRTNTSLMNAIITTSSIQCISYQPITNRVLFGTLKDGMFLYNYNS 1138
Query: 260 DARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNC 319
L + A CV + + DR G+ VL + L+ + P
Sbjct: 1139 SNNSLRKKIGQNMPLATAQCVFITDELFAGIDRFGNFLVLEYDELLDADVDRYEVRDPVS 1198
Query: 320 AYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEY 379
Y SI++G LG L E S I+AS G + +F + EEY
Sbjct: 1199 NY-------SIKEG----------CLG--LQRMEQSNN-ILASGSSGGLYLFARLGKEEY 1238
Query: 380 ELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAVL 439
++LE +Q+ L LT L GNDH +RS + V ILDGDML Q+LEL T Q ++
Sbjct: 1239 QILETLQSILCQFDLTKSLTGNDHQCYRSEVS--MVKNILDGDMLVQYLELQDTLQISIA 1296
Query: 440 SFTLGSFDTIKASSKL 455
+ + D +K +L
Sbjct: 1297 TIII---DELKQKQQL 1309
>gi|198420618|ref|XP_002125906.1| PREDICTED: similar to Splicing factor 3B subunit 3
(Spliceosome-associated protein 130) (SAP 130)
(Pre-mRNA-splicing factor SF3b 130 kDa subunit) (SF3b130)
(STAF130) [Ciona intestinalis]
Length = 1216
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 147/351 (41%), Gaps = 58/351 (16%)
Query: 110 LCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDG--- 166
+C+E QN S+ C +S +VG A E L +P A G
Sbjct: 878 ICLE--QNEAALSIAICKFPNNSDDTFV----LVGVACE------LLINPRQARGGGEIH 925
Query: 167 -IKLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFA 225
K+ E E +L L + T + AICPY R L G + + + +R+
Sbjct: 926 TYKINE-EGNKLELVHKTVVDEVPSAICPYQGR-VLIGVGKLLRI--YDLGKKKLLRKCE 981
Query: 226 VGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I + A RI V D ++ + + Y +L D R V ++D +
Sbjct: 982 NKHIPNYIASIQAVGHRIIVCDVQESVHWVRYRRHENQLVVFADDTYPRWVTSATVLDWN 1041
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNASPECNLTPN-------------CAYHMGEIAV 328
T VSD+ G+I+VL +D ++D+ S L C YH+GE +
Sbjct: 1042 TVAVSDKFGNISVLRLPSDVNDDVQDDPSGTKALWTRGILNGAMQKCEVLCMYHVGETVL 1101
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
S++K + I +++ +TL GSI + +P +S E+++ + ++
Sbjct: 1102 SLQKTTLI----------------PGGSESLVYTTLSGSIGMLVPFTSHEDHDFFQHLE- 1144
Query: 388 RLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ + PLLG DH +RS P V ++DGD+ F + +++Q++V
Sbjct: 1145 -MHMRNECPPLLGRDHLAYRSYYFP--VKNVIDGDLCELFNSMEASKQKSV 1192
>gi|312370905|gb|EFR19207.1| hypothetical protein AND_22901 [Anopheles darlingi]
Length = 1287
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 38/217 (17%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL-- 299
R+ V D ++ + Y +L D R V L+D DT D+ G+IAVL
Sbjct: 1069 RVYVSDVQESVYCLKYKRPENQLIIFADDTHPRWVTSATLLDYDTVATGDKFGNIAVLRL 1128
Query: 300 --SCSDRLEDNASPECNLTPN-------------CAYHMGEIAVSIRKGSFIYKLPADDA 344
S SD ++++ + L C +H+GEI +S++K + I
Sbjct: 1129 PHSVSDDVDEDPTGNKALWDRGLLNGASQKAENICTFHLGEIVMSLQKATLI-------- 1180
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDH 403
++I +T+ G++ +P +S E+Y+ + ++ + + PL G DH
Sbjct: 1181 --------PGGSESLIYATMSGTVGALVPFTSREDYDFFQHLE--MHMRNENPPLCGRDH 1230
Query: 404 SEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLS 440
+RS P V ++DGD+ QF L +Q+++ S
Sbjct: 1231 LSYRSYYYP--VKNVMDGDLCEQFTSLDPAKQKSIAS 1265
>gi|307166104|gb|EFN60356.1| Splicing factor 3B subunit 3 [Camponotus floridanus]
Length = 1201
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 122/287 (42%), Gaps = 45/287 (15%)
Query: 172 TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRF 231
TE + L + + + LAICPY R L G + + + +R+
Sbjct: 916 TECTSIELLHKSPLDEVPLAICPYQGR-VLVGVGRMLRL--YDMGKKKLLRKCENKHIPN 972
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
++ + A RI V D ++ + Y +L D R + ++D DT +D
Sbjct: 973 AVVSINAIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRFITTTCVLDYDTVATAD 1032
Query: 292 RKGSIAVLSCSDRLED------------------NASPECNLTPNCAYHMGEIAVSIRKG 333
+ G+IAV+ + + D N + + T C +H+GE +S++K
Sbjct: 1033 KYGNIAVIRLATGINDDVDEDPTGNKALWDRGLLNGASQKADTVAC-FHVGETVMSLQKA 1091
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AI 391
+ I +++ +TL G++ + +P +S E+++ + ++ + +
Sbjct: 1092 TLI----------------PGGSESLVYTTLSGTVGVLVPFTSHEDHDFFQHLEMHMRSE 1135
Query: 392 HPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
HP PL G DH FRS P V ++DGD+ QF + +Q+++
Sbjct: 1136 HP---PLCGRDHLSFRSYYYP--VKNVIDGDLCEQFNSIEPVKQKSI 1177
>gi|443922899|gb|ELU42250.1| splicing factor 3B subunit 3 [Rhizoctonia solani AG-1 IA]
Length = 1212
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ LT+ +RI VG+ ++ + + +Y ++ +L D S R V L+D DT V D+
Sbjct: 984 IVTLTSQGSRIIVGEMQESVHYATYKPESNRLLVFADDTSARWVTSAALVDYDTVAVGDK 1043
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASF 352
G+I V +RL N S + + P A M E + KL A +GD + S
Sbjct: 1044 FGNIFV----NRLPANISQQVDDDPTGAGIMHEREF-LHGAPHKTKLLAHYNVGDIVTSV 1098
Query: 353 ESS------QTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSE 405
+ + + + L G+I + IP++S E+ + + ++ + + L+G DH
Sbjct: 1099 HRAALVPGGRDVVAYTGLHGTIGVLIPLASKEDVDFITTLEQHMRSE--HSSLVGRDHLA 1156
Query: 406 FRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+R P V ++DGD+ +F L ST+Q+++
Sbjct: 1157 YRGYYVP--VKAVVDGDLCERFAMLPSTKQKSI 1187
>gi|299751161|ref|XP_001830098.2| pre-mRNA-splicing factor rse1 [Coprinopsis cinerea okayama7#130]
gi|298409248|gb|EAU91763.2| pre-mRNA-splicing factor rse1 [Coprinopsis cinerea okayama7#130]
Length = 1205
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 117/249 (46%), Gaps = 21/249 (8%)
Query: 200 FLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHE 259
LA G A + +++ R A ++ I+ L +RI +GD ++ LF Y E
Sbjct: 947 LLAGVGKALRIYDL---GKKKLLRKAETKSPTAIVSLATQGSRIVIGDMQESTLFAVYKE 1003
Query: 260 DARKLEQIYCDPSQ-RLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPN 318
+L I+ D +Q R V+ ++D +T V D+ G+I V +RL+ S + + P
Sbjct: 1004 AENRL-LIFGDDTQPRWVSAMTMVDYNTVAVGDKFGNIFV----NRLDSTISDQVDEDPT 1058
Query: 319 CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFES------SQTTIIASTLLGSIVIFI 372
A + E A ++ K+ A +GD + S + ++ + L G+I I +
Sbjct: 1059 GAGILHEKA-TLNGAPHKTKMLAHFHVGDIITSIHKVSLVVGGREVLLYTGLQGTIGILV 1117
Query: 373 PISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELT 431
P++S E+ E L ++ I L+G DH +R PV ++DGD+ + L+
Sbjct: 1118 PLTSKEDIEFLTMLEQH--IRNEQGSLVGRDHLSWRGYYVPVKA--VIDGDLCETYGGLS 1173
Query: 432 STQQEAVLS 440
S++Q A+ S
Sbjct: 1174 SSKQSAIAS 1182
>gi|332026090|gb|EGI66238.1| Splicing factor 3B subunit 3 [Acromyrmex echinatior]
Length = 1217
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 45/269 (16%)
Query: 190 LAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCR 249
LAICPY R L G + + + +R+ ++ + A RI V D +
Sbjct: 950 LAICPYQGR-VLVGVGRMLRL--YDMGKKKLLRKCENKHIPNAVVSINAIGQRIYVSDVQ 1006
Query: 250 DGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLED-- 307
+ + Y +L D R + ++D DT +D+ G+IAV+ + + D
Sbjct: 1007 ESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRLATGINDDV 1066
Query: 308 ----------------NASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLAS 351
N + + T C +H+GE +S++K + I
Sbjct: 1067 DEDPTGNKALWDRGLLNGASQKADTVAC-FHVGETVMSLQKATLI--------------- 1110
Query: 352 FESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPLLGNDHSEFRSR 409
+++ +TL G++ + +P +S E+++ + ++ + + HP PL G DH FRS
Sbjct: 1111 -PGGSESLVYTTLSGTVGVLVPFTSHEDHDFFQHLEMHMRSEHP---PLCGRDHLSFRSY 1166
Query: 410 ENPVGVPKILDGDMLSQFLELTSTQQEAV 438
P V ++DGD+ QF + T+Q+++
Sbjct: 1167 YYP--VKNVIDGDLCEQFNSIEPTKQKSI 1193
>gi|322797581|gb|EFZ19622.1| hypothetical protein SINV_00421 [Solenopsis invicta]
Length = 1217
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 45/269 (16%)
Query: 190 LAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCR 249
LAICPY R L G + + + +R+ ++ + A RI V D +
Sbjct: 950 LAICPYQGR-VLVGVGRMLRL--YDMGKKKLLRKCENKHIPNAVVSINAIGQRIYVSDVQ 1006
Query: 250 DGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLED-- 307
+ + Y +L D R + ++D DT +D+ G+IAV+ + + D
Sbjct: 1007 ESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRLATGINDDV 1066
Query: 308 ----------------NASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLAS 351
N + + T C +H+GE +S++K + I
Sbjct: 1067 DEDPTGNKALWDRGLLNGASQKADTVAC-FHVGETVMSLQKATLI--------------- 1110
Query: 352 FESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPLLGNDHSEFRSR 409
+++ +TL G++ + +P +S E+++ + ++ + + HP PL G DH FRS
Sbjct: 1111 -PGGSESLVYTTLSGTVGVLVPFTSHEDHDFFQHLEMHMRSEHP---PLCGRDHLSFRSY 1166
Query: 410 ENPVGVPKILDGDMLSQFLELTSTQQEAV 438
P V ++DGD+ QF + T+Q+++
Sbjct: 1167 YYP--VKNVIDGDLCEQFNSIEPTKQKSI 1193
>gi|168064351|ref|XP_001784126.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664326|gb|EDQ51050.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1214
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 118/291 (40%), Gaps = 63/291 (21%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ A+C + R + Q +R + +G+ + +
Sbjct: 935 LELVHKTPVDGVPTALCQFQGRLLVGVG--------------QVLRIYDLGKRKLLRKCE 980
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ + Y D +L D R + + +D D
Sbjct: 981 NKNFPNTIIAIHTYGDRIYVGDIQESFHYVKYRRDENQLYTFADDSCPRWLTASLHIDFD 1040
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G+I V+ S+ +ED+ + N PN +H+GE+
Sbjct: 1041 TMAGADKFGNIYVMRLPQDVSEEIEDDPTGGKIKWEQGRLNGAPNKVEEIIQFHVGEVVT 1100
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
S++K S I +++ T++GS+ +P SS E+ + ++
Sbjct: 1101 SLQKASLI----------------PGGGESVLYGTIMGSMGALLPFSSREDVDFFSHLEM 1144
Query: 388 RLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
L PL G DH FRS P V ++DGD+ Q+ LTS Q+ +
Sbjct: 1145 HLRQE--NPPLCGRDHMGFRSAYFP--VKDVIDGDLCEQYPMLTSELQKKI 1191
>gi|427798971|gb|JAA64937.1| Putative damage-specific dna binding complex subunit ddb1, partial
[Rhipicephalus pulchellus]
Length = 1259
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 127/294 (43%), Gaps = 67/294 (22%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM--- 232
+L L ++T+ A+CP+ R LA G +R + +GR + +
Sbjct: 933 RLELVHATSVEEAPTALCPFQGR-LLAGVGKC-------------LRLYDLGRKKLLRKC 978
Query: 233 --------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDV 284
I+ + + R+ VGD ++ F Y +L D R + ++D
Sbjct: 979 ENKYIPSAIVSIQSMGNRVVVGDVQESFFFLRYKRQENQLVIFADDAVPRWITASCMLDY 1038
Query: 285 DTAVVSDRKGSIAVL----SCSDRLEDN---------------ASPECNLTPNCAYHMGE 325
DT +D+ G+++++ S SD ++++ +S + + N +H+GE
Sbjct: 1039 DTVAGADKFGNVSIIRLPNSVSDEVDEDPTGIKSLWDRGWLGGSSQKAEVISN--FHIGE 1096
Query: 326 IAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEA 384
+S++K + I +++ TL G+I + +P ++ E+++ +
Sbjct: 1097 TVLSLQKATLI----------------PGGSESLVYVTLSGTIGVLVPFTAHEDHDFFQH 1140
Query: 385 VQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
++ + + PL G DH FRS P V ++DGD+ QF L ++Q+++
Sbjct: 1141 LE--MHMRSENPPLCGRDHLSFRSSYFP--VKNVIDGDLCEQFNSLDPSKQKSI 1190
>gi|357606250|gb|EHJ64976.1| putative Splicing factor 3B subunit [Danaus plexippus]
Length = 1216
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 142/331 (42%), Gaps = 78/331 (23%)
Query: 142 IVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLAYST---TWPGMVLAICPYLDR 198
+VG A + L S CS + S K+ T +L L + T +PG + A +
Sbjct: 906 VVGVAKDALLSPRSCS---EGSLHVYKI--YNTGKLELVHKTPIDEYPGALAA----FNG 956
Query: 199 YFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF-----------TRIAVGD 247
LA G + +R + +GR + + H RI V D
Sbjct: 957 KLLAGVG-------------RMLRLYDIGRRKLLRKCENRHIPNLIADIKTIRQRIFVSD 1003
Query: 248 CRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL----SCSD 303
++ + Y + +L D + R + + ++D DT ++D+ G++AVL S SD
Sbjct: 1004 VQESVFCVKYKKRENQLIIFADDTNPRWITNTCILDYDTVAMADKFGNVAVLRLPQSVSD 1063
Query: 304 RLEDN---------------ASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
++++ AS + ++T N +H+GE S+++ + I
Sbjct: 1064 DVDEDPTGNKALWDRGLLNGASQKGDITVN--FHVGETVTSLQRATLI------------ 1109
Query: 349 LASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFR 407
++ +T+ G++ +F+P +S E+++ + ++ + + +PL G DH FR
Sbjct: 1110 ----PGGSEALLYATVSGALGVFLPFTSREDHDFFQHLE--MHMRSENSPLCGRDHLSFR 1163
Query: 408 SRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
S P V ++DGD+ QF L +Q+A+
Sbjct: 1164 SYYYP--VKNVIDGDLCEQFNSLEPAKQKAI 1192
>gi|168046759|ref|XP_001775840.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672847|gb|EDQ59379.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1214
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 117/291 (40%), Gaps = 63/291 (21%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ A+C + R + Q +R + +G+ + +
Sbjct: 935 LELVHKTPVDGVPTALCQFQGRLLVGVG--------------QVLRIYDLGKRKLLRKCE 980
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ + Y D +L D R + + +D D
Sbjct: 981 NKNFPNTIIAIHTYGDRIYVGDIQESFHYVKYRRDENQLYTFADDSCPRWLTASLHIDFD 1040
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G++ V+ S+ +ED+ + N PN +H+GE+
Sbjct: 1041 TMAGADKFGNVYVMRLPQDVSEEIEDDPTGGKIKWEQGRLNGAPNKVEEIIQFHVGEVVT 1100
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
S++K S I +++ T++GS+ +P SS E+ + ++
Sbjct: 1101 SLQKASLI----------------PGGGESVLYGTIMGSVGALLPFSSREDVDFFSHLEM 1144
Query: 388 RLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
L PL G DH FRS P V ++DGD+ Q+ LTS Q +
Sbjct: 1145 HLRQE--NPPLCGRDHMAFRSAYFP--VKDVIDGDLCEQYPMLTSELQRKI 1191
>gi|324501533|gb|ADY40680.1| Splicing factor 3B subunit 3 [Ascaris suum]
Length = 1214
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 24/208 (11%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCD-PSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
RI V D ++ + F Y + +L I+CD S R V ++D DT V DR GSIAVL
Sbjct: 996 RIVVSDSQESLHFMRYKKQDNQL-SIFCDDTSPRFVTCICILDYDTVAVGDRFGSIAVL- 1053
Query: 301 CSDRLEDNASPECNLTPN---CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQT 357
RL + E P + G + + +K I + +GD + S + +
Sbjct: 1054 ---RLPKGVTEEVQEDPTGVRALWDRGNLNGASQKVEHIGQF----YVGDTVTSMQKTSL 1106
Query: 358 T------IIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRE 410
++ +T+ G+I + +P +S +E++ + ++ L + PL G DH FRS
Sbjct: 1107 VPGANDCLVYTTISGTIGMLVPFVSRDEFDFFQNLEMHLRVE--FPPLCGRDHLAFRSFY 1164
Query: 411 NPVGVPKILDGDMLSQFLELTSTQQEAV 438
PV I+DGD+ Q+ + +Q+AV
Sbjct: 1165 FPVKC--IIDGDLCEQYALMPLDKQKAV 1190
>gi|307205956|gb|EFN84082.1| Splicing factor 3B subunit 3 [Harpegnathos saltator]
Length = 1217
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 122/287 (42%), Gaps = 45/287 (15%)
Query: 172 TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRF 231
+E L L + + + LAICPY R L G + + + +R+
Sbjct: 932 SECTNLELLHKSPLDEVPLAICPYQGR-VLVGVGRMLRL--YDMGKKKLLRKCENKHIPN 988
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
++ + A RI V D ++ + Y +L D R + ++D DT +D
Sbjct: 989 AVVSINAIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATAD 1048
Query: 292 RKGSIAVLSCSDRLED------------------NASPECNLTPNCAYHMGEIAVSIRKG 333
+ G+IAV+ + + D N + + T C +H+GE +S++K
Sbjct: 1049 KFGNIAVIRLATGINDDVDEDPTGNKALWDRGLLNGASQKADTVAC-FHVGETVMSLQKA 1107
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AI 391
+ I +++ +TL G++ + +P +S E+++ + ++ + +
Sbjct: 1108 TLI----------------PGGSESLVYTTLSGTVGVLVPFTSHEDHDFFQHLEMHMRSE 1151
Query: 392 HPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
HP PL G DH FRS P V ++DGD+ QF + +Q+++
Sbjct: 1152 HP---PLCGRDHLSFRSYYYP--VKNVIDGDLCEQFNSIEPAKQKSI 1193
>gi|429329284|gb|AFZ81043.1| CPSF A subunit region domain-containing protein [Babesia equi]
Length = 1175
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 123/282 (43%), Gaps = 55/282 (19%)
Query: 174 TWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMI 233
+++RL ++T G+ A+ Y + +C + R+R +A+G+ + ++
Sbjct: 909 NYEIRLLHATPITGVPRALAGYEGKL----------ICALGS----RLRLYALGKRQLLL 954
Query: 234 ------------MLLTAHFTRIAVGDCRDGILFYS---YHEDARKLEQIYCDPSQRLVAD 278
+ ++ +RI GD R+G Y EDA + E I R ++
Sbjct: 955 KAEHRTCTDHGFIWISVCGSRIFAGDIREGFQLLRLRFYAEDAAEFEWIGHSTGPRWLSC 1014
Query: 279 CVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYK 338
C +D T + D+ S+ + ++ + + +H+G++ +I K SF
Sbjct: 1015 CEQLDYHTVIGGDKFDSLFIARVP---QEEFTKATQFENHAQFHLGDLPTAISKVSF--- 1068
Query: 339 LPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAI-HPLTA 396
SQ +I ST+LGSI FIP ++ +E +L++ ++ +A HP
Sbjct: 1069 -------------NNMSQPIVIYSTILGSIGAFIPYANKDELDLMQHLEMIMANEHP--- 1112
Query: 397 PLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
PL G +H+ FRS P V I+DGD+ Q L Q +
Sbjct: 1113 PLCGREHAFFRSYYYP--VQNIVDGDLCEQVKTLPEAVQRKI 1152
>gi|157131296|ref|XP_001662180.1| spliceosomal protein sap [Aedes aegypti]
gi|108881836|gb|EAT46061.1| AAEL002709-PA [Aedes aegypti]
Length = 1215
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 101/226 (44%), Gaps = 38/226 (16%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ + A +R+ V D ++ I Y +L D R + L+D DT +D+
Sbjct: 988 IVNIQAMGSRVFVSDVQESIYCIKYKRAENQLIIFADDTHPRWITTSTLLDYDTVATADK 1047
Query: 293 KGSIAVL----SCSDRLEDNASPECNLTPN-------------CAYHMGEIAVSIRKGSF 335
G+IA+L S SD ++++ + L C +H+GE +S++K +
Sbjct: 1048 FGNIAILRLPHSVSDDVDEDPTGNKALWDRGLLNGASQKAENICTFHLGETIMSLQKATL 1107
Query: 336 IYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPL 394
I ++I +T+ G++ +P +S E+Y+ + ++ + +
Sbjct: 1108 I----------------PGGSESLIYATMSGTVGALVPFTSREDYDFFQHLE--MHMRNE 1149
Query: 395 TAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLS 440
PL G DH +RS P V ++DGD+ QF + +Q+++ S
Sbjct: 1150 NTPLCGRDHLSYRSYYYP--VKHVMDGDLCEQFTSMDPAKQKSIAS 1193
>gi|157141630|ref|XP_001647735.1| spliceosomal protein sap [Aedes aegypti]
gi|108867854|gb|EAT32403.1| AAEL015441-PA, partial [Aedes aegypti]
Length = 645
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 101/226 (44%), Gaps = 38/226 (16%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ + A +R+ V D ++ I Y +L D R + L+D DT +D+
Sbjct: 418 IVNIQAMGSRVFVSDVQESIYCIKYKRAENQLIIFADDTHPRWITTSTLLDYDTVATADK 477
Query: 293 KGSIAVL----SCSDRLEDNASPECNLTPN-------------CAYHMGEIAVSIRKGSF 335
G+IA+L S SD ++++ + L C +H+GE +S++K +
Sbjct: 478 FGNIAILRLPHSVSDDVDEDPTGNKALWDRGLLNGASQKAENICTFHLGETIMSLQKATL 537
Query: 336 IYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPL 394
I ++I +T+ G++ +P +S E+Y+ + ++ + +
Sbjct: 538 I----------------PGGSESLIYATMSGTVGALVPFTSREDYDFFQHLE--MHMRNE 579
Query: 395 TAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLS 440
PL G DH +RS P V ++DGD+ QF + +Q+++ S
Sbjct: 580 NTPLCGRDHLSYRSYYYP--VKHVMDGDLCEQFTSMDPAKQKSIAS 623
>gi|453087531|gb|EMF15572.1| splicing factor 3B subunit 3 [Mycosphaerella populorum SO2202]
Length = 1223
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 121/278 (43%), Gaps = 18/278 (6%)
Query: 167 IKLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAV 226
KLEE T +L + T + V A+ P+ R L GN ++ + + R A
Sbjct: 934 FKLEEDGT-KLTFVHKTKFDQPVYALLPFHGRLALG-VGNELFIYDI---GQKALLRKAR 988
Query: 227 GR-TRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
G+ T I+ L +H RI GD +G+ + Y +L D QR ++D +
Sbjct: 989 GQATPNQIVSLESHGQRIICGDVSEGVTYMVYKPGYNRLIPFVDDVVQRWTTGTTMIDYE 1048
Query: 286 TAVVSDRKGSIAVLSCSDRLEDNASPE--CNLTPNCAYHMG--EIAVSIRKGSFIYKLPA 341
T D+ G++ V+ C ++ A E N ++G + +R + +P
Sbjct: 1049 TTAGGDKFGNLWVVRCPEQPSQEADEEGAGGFIMNERSYLGGAPYRLDLRAHYYCQDIPM 1108
Query: 342 DDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLG 400
+A Q + S L G++ + +P ++ E+ E +++ +L I PL G
Sbjct: 1109 SLQRTALVA---GGQEVLFWSGLQGTLGMLVPFVTREDVEFFTSLEQQLRIE--DPPLAG 1163
Query: 401 NDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
DH +RS P V ++DGD+ +F+ L+ ++ V
Sbjct: 1164 RDHLMYRSYYVP--VKGVIDGDLCERFMALSYDSKQKV 1199
>gi|168045572|ref|XP_001775251.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673464|gb|EDQ59987.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1201
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 118/291 (40%), Gaps = 63/291 (21%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ A+C + R + Q +R + +G+ + +
Sbjct: 922 LELVHKTPVDGVPTALCQFQGRLLVGVG--------------QVLRIYDLGKRKLLRKCE 967
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ + Y D +L D R + + +D D
Sbjct: 968 NKNFPNTIIAIHTYGDRIYVGDIQESFHYVKYRRDENQLYTFADDSCPRWLTASLHIDFD 1027
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G++ V+ S+ +ED+ + N PN +H+GE+
Sbjct: 1028 TMAGADKFGNVYVMRLPQDVSEEIEDDPTGGKIKWEQGRLNGAPNKVDEIIQFHVGEVVT 1087
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
S++K S I +++ T++GS+ +P SS E+ + ++
Sbjct: 1088 SLQKASLI----------------PGGGESMLYGTVMGSMGALLPFSSREDVDFFSHLEM 1131
Query: 388 RLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
L PL G DH FRS P V ++DGD+ Q+ LTS Q+ +
Sbjct: 1132 HLRQE--NPPLCGRDHMAFRSAYFP--VKDVIDGDLCEQYSMLTSELQKKI 1178
>gi|91092128|ref|XP_972649.1| PREDICTED: similar to AGAP005549-PA [Tribolium castaneum]
gi|270004662|gb|EFA01110.1| hypothetical protein TcasGA2_TC010322 [Tribolium castaneum]
Length = 1219
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 190/455 (41%), Gaps = 53/455 (11%)
Query: 7 LNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGE 66
N F L TP+K + H ES L+++ TE N T + ++ + + E E
Sbjct: 775 FNQVSFPLEYTPRKFIIHPESNNLLIIETEHNAYTEETKKQRRLQMAEEMKEAAGEEEQE 834
Query: 67 TGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEA--ESTKGRLIVLCIEHMQNSDCGSMT 124
K M + + + ++ +G + S + +G ++ CI QN S
Sbjct: 835 LAKEMADAFLNEDLPESIFSAPKAGHGMWASTLKIMDPVQG-IVHKCIRLEQNEAAMSSV 893
Query: 125 FCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLAYSTT 184
K + Q+T IVG + + + C++ D K++ +L + T
Sbjct: 894 LV-KFQNQPQQT--LFLIVGISKDFQLNPRHCNT---GFLDTYKMDPMGR-ELEFVHRTP 946
Query: 185 WPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIA 244
+ +A+C Y + LA G + + + +R+ I+ + A RI
Sbjct: 947 VDEVPMALCAY-NGLLLAGVGRMLRL--YDMGKKKLLRKCENKHIPNAIVNIQAMGKRIF 1003
Query: 245 VGDCRDGILFYSYHEDARKLEQIYCDPSQRLVA-DCVLMDVDTAVVSDRKGSIAVL---- 299
V D ++ + Y +L D R V +CVL D DT V+D+ G+IA+L
Sbjct: 1004 VSDVQESVFMVRYKRAENQLIIFADDTHPRWVTCNCVL-DYDTVAVADKFGNIAILRLPP 1062
Query: 300 SCSDRLEDNASPECNLTPN-------------CAYHMGEIAVSIRKGSFIYKLPADDALG 346
+ SD +E++ + +L +H+GE ++K + I
Sbjct: 1063 NVSDDVEEDPTGHKSLWDRGLLNGASQKADTIATFHVGETVTWLQKATLI---------- 1112
Query: 347 DCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSE 405
+ES +I +TL GS+ + +P +S E+++ + ++ + + +PL G DH
Sbjct: 1113 --PGGWES----LIYTTLSGSVGVLVPFTSREDHDFFQHLE--MHMRSENSPLCGRDHLS 1164
Query: 406 FRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLS 440
FRS P V ++DGD+ Q+ L +Q+++ S
Sbjct: 1165 FRSYYFP--VKNVIDGDLCEQYNSLEPVKQKSIAS 1197
>gi|409075182|gb|EKM75565.1| hypothetical protein AGABI1DRAFT_64324 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1213
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 125/286 (43%), Gaps = 51/286 (17%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
QL L + T + LA+ + R +A G A + + + +R+ + I+
Sbjct: 931 QLELVHKTEIDDVPLALMAFQGR-LVAGVGKALRI--YDIGKKKMLRKVENKQFGSAIVT 987
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQ-RLVADCVLMDVDTAVVSDRKG 294
L+ +RI VGD ++ I F Y +L I+ D SQ R ++ ++D +T V +DR G
Sbjct: 988 LSTQGSRILVGDMQESIFFAVYKAPENRL-LIFADDSQPRWISAATMVDYNTVVAADRFG 1046
Query: 295 SIAVLSCSDRLEDNASPECNLTPN---------------------CAYHMGEIAVSIRKG 333
+I V +RL+ S + + P C +H+G++ SI K
Sbjct: 1047 NIFV----NRLDPRVSDQVDEDPTGAGILHEKGLYMGAPHKTKMICHFHVGDLITSIHKV 1102
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIH 392
S + + ++ + L G+I I +P ++ E+ + + ++ +
Sbjct: 1103 SLV----------------AGGREVLLYTGLHGTIGILVPFVTKEDVDFISTLEQHMRTE 1146
Query: 393 PLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
++ L+G DH +R PV ++DGD+ + +L ++Q A+
Sbjct: 1147 QVS--LVGRDHLGWRGYYVPVKA--VVDGDLCEMYAKLPGSKQSAI 1188
>gi|426192113|gb|EKV42051.1| hypothetical protein AGABI2DRAFT_229642 [Agaricus bisporus var.
bisporus H97]
Length = 1213
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 125/286 (43%), Gaps = 51/286 (17%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
QL L + T + LA+ + R +A G A + + + +R+ + I+
Sbjct: 931 QLELVHKTEIDDVPLALMAFQGR-LVAGVGKALRI--YDIGKKKMLRKVENKQFGSAIVT 987
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQ-RLVADCVLMDVDTAVVSDRKG 294
L+ +RI VGD ++ I F Y +L I+ D SQ R ++ ++D +T V +DR G
Sbjct: 988 LSTQGSRILVGDMQESIFFAVYKAPENRL-LIFADDSQPRWISAATMVDYNTVVAADRFG 1046
Query: 295 SIAVLSCSDRLEDNASPECNLTPN---------------------CAYHMGEIAVSIRKG 333
+I V +RL+ S + + P C +H+G++ SI K
Sbjct: 1047 NIFV----NRLDPRVSDQVDEDPTGAGILHEKGLYMGAPHKTKMICHFHVGDLITSIHKV 1102
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIH 392
S + + ++ + L G+I I +P ++ E+ + + ++ +
Sbjct: 1103 SLV----------------AGGREVLLYTGLHGTIGILVPFVTKEDVDFISTLEQHMRTE 1146
Query: 393 PLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
++ L+G DH +R PV ++DGD+ + +L ++Q A+
Sbjct: 1147 QVS--LVGRDHLGWRGYYVPVKA--VVDGDLCEMYAKLPGSKQSAI 1188
>gi|53136520|emb|CAG32589.1| hypothetical protein RCJMB04_30d19 [Gallus gallus]
Length = 503
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 285 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVAGADKFGNI----C 340
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 341 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 396
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 397 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 441
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 442 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 479
>gi|449282569|gb|EMC89402.1| Splicing factor 3B subunit 3 [Columba livia]
Length = 1225
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 1007 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVAGADKFGNI----C 1062
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1063 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1118
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1119 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1163
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 1164 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 1201
>gi|326927039|ref|XP_003209702.1| PREDICTED: splicing factor 3B subunit 3-like [Meleagris gallopavo]
gi|363738006|ref|XP_001232348.2| PREDICTED: splicing factor 3B subunit 3 [Gallus gallus]
Length = 1217
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 1156 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 1193
>gi|224064143|ref|XP_002188384.1| PREDICTED: splicing factor 3B subunit 3 [Taeniopygia guttata]
Length = 1217
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 1156 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 1193
>gi|328869269|gb|EGG17647.1| CPSF domain-containing protein [Dictyostelium fasciculatum]
Length = 1194
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
RI V D ++ + F++Y L D + R V CV++D DT ++D+ G+IAV+
Sbjct: 973 RIVVSDVQESVHFFTYRRSENVLVLFADDTAPRFVTSCVMLDFDTVAIADKFGTIAVVRM 1032
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESS------ 355
+ + E L ++A++ +L A +G+ + +
Sbjct: 1033 PPSSDTDIDIENELDIGTLTTKSKLALNGAANKL--ELVASFYVGETCCNLTRTSLMVGG 1090
Query: 356 QTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGV 415
II +TL G+I IP SS E E+ Q + + L G DH +RS P V
Sbjct: 1091 SEVIIYTTLGGAIGALIPFSSRE-EVDFFAQLEMQMRQEKESLCGRDHLSYRSYYFP--V 1147
Query: 416 PKILDGDMLSQFLELTSTQQEAV 438
++DGD+ Q+ L +T+Q +V
Sbjct: 1148 KNVIDGDLCEQYSTLDATKQRSV 1170
>gi|71004436|ref|XP_756884.1| hypothetical protein UM00737.1 [Ustilago maydis 521]
gi|74704394|sp|Q4PGM6.1|RSE1_USTMA RecName: Full=Pre-mRNA-splicing factor RSE1
gi|46095609|gb|EAK80842.1| hypothetical protein UM00737.1 [Ustilago maydis 521]
Length = 1221
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
++ L A +RI VGD ++ I+F SY +L D + V C ++D DT +D+
Sbjct: 993 VVSLDAQGSRIVVGDMQESIIFASYKPLENRLVTFADDVMPKFVTRCTMLDYDTVAAADK 1052
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASF 352
G+I VL RL+ N S + P + E V + + L A +GD + S
Sbjct: 1053 FGNIYVL----RLDGNTSRSVDEDPTGMTIVHEKPV-LMGAAHKASLVAHFFVGDIITSL 1107
Query: 353 ESS------QTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSE 405
+ + ++ + L GSI +P +S E+ + L +++ L ++G DH
Sbjct: 1108 HRTAMVAGGREVLLYTGLSGSIGALVPFVSKEDVDTLSTLESHLRQE--NNSIVGRDHLA 1165
Query: 406 FRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+RS P V ++DGD+ F L+ +Q A+
Sbjct: 1166 YRSSYAP--VKSVIDGDLCETFGLLSPAKQNAI 1196
>gi|193785523|dbj|BAG50889.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 285 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 340
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 341 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 396
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 397 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 441
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 442 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 479
>gi|327286386|ref|XP_003227911.1| PREDICTED: splicing factor 3B subunit 3-like [Anolis carolinensis]
Length = 1217
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTHPRWVTTACLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 1156 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 1193
>gi|119572189|gb|EAW51804.1| splicing factor 3b, subunit 3, 130kDa, isoform CRA_b [Homo sapiens]
Length = 635
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 417 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 472
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 473 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 528
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 529 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 573
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 574 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 611
>gi|40788938|dbj|BAA32662.2| KIAA0017 protein [Homo sapiens]
Length = 1253
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 1035 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1090
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1091 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1146
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1147 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1191
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 1192 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 1229
>gi|440907208|gb|ELR57379.1| Splicing factor 3B subunit 3 [Bos grunniens mutus]
Length = 1133
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 915 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 970
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 971 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1026
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1027 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1071
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 1072 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 1109
>gi|332263858|ref|XP_003280968.1| PREDICTED: splicing factor 3B subunit 3 [Nomascus leucogenys]
Length = 1271
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 1053 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1108
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1109 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1164
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1165 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1209
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 1210 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 1247
>gi|28175094|gb|AAH31197.2| Sf3b3 protein, partial [Mus musculus]
Length = 494
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 276 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 331
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 332 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 387
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 388 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 432
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 433 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 470
>gi|334313376|ref|XP_003339894.1| PREDICTED: splicing factor 3B subunit 3-like [Monodelphis domestica]
Length = 1202
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 984 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1039
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1040 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1095
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1096 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1140
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 1141 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 1178
>gi|285999|dbj|BAA02805.1| KIAA0017 [Homo sapiens]
Length = 399
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 181 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 236
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 237 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 292
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 293 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 337
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 338 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 375
>gi|12653387|gb|AAH00463.1| SF3B3 protein [Homo sapiens]
gi|13111947|gb|AAH03146.1| SF3B3 protein [Homo sapiens]
Length = 399
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 181 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 236
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 237 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 292
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 293 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 337
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 338 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 375
>gi|193786710|dbj|BAG52033.1| unnamed protein product [Homo sapiens]
Length = 897
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 679 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 734
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 735 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 790
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 791 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 835
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 836 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 873
>gi|149038189|gb|EDL92549.1| splicing factor 3b, subunit 3 (predicted) [Rattus norvegicus]
Length = 650
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 432 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 487
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 488 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 543
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 544 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 588
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 589 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 626
>gi|26351753|dbj|BAC39513.1| unnamed protein product [Mus musculus]
Length = 463
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 245 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 300
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 301 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 356
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 357 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 401
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 402 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 439
>gi|241560031|ref|XP_002400960.1| spliceosomal protein sap, putative [Ixodes scapularis]
gi|215501812|gb|EEC11306.1| spliceosomal protein sap, putative [Ixodes scapularis]
Length = 1019
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 125/294 (42%), Gaps = 67/294 (22%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM--- 232
QL L ++T A+CP+ R LA G +R + +GR + +
Sbjct: 738 QLELVHATPVEEAPTALCPFQGR-LLAGVGKC-------------LRLYDLGRKKLLRKC 783
Query: 233 --------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDV 284
I+ + A R+ V D ++ F Y +L D R + ++D
Sbjct: 784 ENKYIPNAIVSIQAMGNRVVVSDVQESFFFLRYKRQENQLVIFADDSVPRWITASCMLDY 843
Query: 285 DTAVVSDRKGSIAVL----SCSDRLEDN---------------ASPECNLTPNCAYHMGE 325
+T +D+ G+++++ S SD ++++ +S + ++ N +H+GE
Sbjct: 844 ETVAGADKFGNVSIIRLPSSISDDVDEDPTGIKSLWDRGWLGGSSQKADVISN--FHIGE 901
Query: 326 IAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEA 384
+S++K + I +++ TL G++ + +P ++ E+++ +
Sbjct: 902 TVLSLQKATLI----------------PGGSESLVYVTLSGTVGVLVPFTAHEDHDFFQH 945
Query: 385 VQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
++ + PL G DH FRS PV ++DGD+ QF L ++Q+++
Sbjct: 946 LEMHMRYE--NPPLCGRDHLSFRSSYFPVK--NVIDGDLCEQFNSLDPSKQKSI 995
>gi|432114152|gb|ELK36185.1| Splicing factor 3B subunit 3 [Myotis davidii]
Length = 1217
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 1156 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 1193
>gi|73957045|ref|XP_536791.2| PREDICTED: splicing factor 3B subunit 3 isoform 1 [Canis lupus
familiaris]
gi|149699332|ref|XP_001500880.1| PREDICTED: splicing factor 3B subunit 3 [Equus caballus]
gi|301771131|ref|XP_002920989.1| PREDICTED: splicing factor 3B subunit 3-like [Ailuropoda melanoleuca]
gi|344290794|ref|XP_003417122.1| PREDICTED: splicing factor 3B subunit 3-like [Loxodonta africana]
gi|410983914|ref|XP_003998280.1| PREDICTED: splicing factor 3B subunit 3 [Felis catus]
gi|426242169|ref|XP_004014947.1| PREDICTED: splicing factor 3B subunit 3 [Ovis aries]
gi|417406150|gb|JAA49749.1| Putative damage-specific dna binding complex subunit ddb1 [Desmodus
rotundus]
gi|431912451|gb|ELK14585.1| Splicing factor 3B subunit 3 [Pteropus alecto]
Length = 1217
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 1156 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 1193
>gi|6006515|emb|CAB56791.1| spliceosomal protein SAP 130 [Homo sapiens]
Length = 1217
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 1156 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 1193
>gi|410297890|gb|JAA27545.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
Length = 1217
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 1156 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 1193
>gi|149640712|ref|XP_001506454.1| PREDICTED: splicing factor 3B subunit 3 [Ornithorhynchus anatinus]
gi|395508661|ref|XP_003758628.1| PREDICTED: splicing factor 3B subunit 3 [Sarcophilus harrisii]
Length = 1217
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 1156 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 1193
>gi|46362557|gb|AAH68974.1| Splicing factor 3b, subunit 3, 130kDa [Homo sapiens]
Length = 1217
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 1156 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 1193
>gi|54112121|ref|NP_036558.3| splicing factor 3B subunit 3 [Homo sapiens]
gi|118150814|ref|NP_001071319.1| splicing factor 3B subunit 3 [Bos taurus]
gi|296231541|ref|XP_002761182.1| PREDICTED: splicing factor 3B subunit 3 isoform 2 [Callithrix
jacchus]
gi|332846357|ref|XP_511081.3| PREDICTED: splicing factor 3B subunit 3 [Pan troglodytes]
gi|397518709|ref|XP_003829523.1| PREDICTED: splicing factor 3B subunit 3 [Pan paniscus]
gi|402908991|ref|XP_003917214.1| PREDICTED: splicing factor 3B subunit 3 [Papio anubis]
gi|403298333|ref|XP_003939977.1| PREDICTED: splicing factor 3B subunit 3 [Saimiri boliviensis
boliviensis]
gi|426382761|ref|XP_004057969.1| PREDICTED: splicing factor 3B subunit 3 [Gorilla gorilla gorilla]
gi|116242787|sp|Q15393.4|SF3B3_HUMAN RecName: Full=Splicing factor 3B subunit 3; AltName:
Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
Short=SF3b130; AltName: Full=STAF130; AltName:
Full=Spliceosome-associated protein 130; Short=SAP 130
gi|125987788|sp|A0JN52.1|SF3B3_BOVIN RecName: Full=Splicing factor 3B subunit 3; AltName:
Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
Short=SF3b130; AltName: Full=Spliceosome-associated
protein 130; Short=SAP 130
gi|117306205|gb|AAI26519.1| Splicing factor 3b, subunit 3, 130kDa [Bos taurus]
gi|119572190|gb|EAW51805.1| splicing factor 3b, subunit 3, 130kDa, isoform CRA_c [Homo sapiens]
gi|168274284|dbj|BAG09562.1| splicing factor 3B subunit 3 [synthetic construct]
gi|296478233|tpg|DAA20348.1| TPA: splicing factor 3B subunit 3 [Bos taurus]
gi|355710371|gb|EHH31835.1| Spliceosome-associated protein 130 [Macaca mulatta]
gi|355756944|gb|EHH60552.1| Spliceosome-associated protein 130 [Macaca fascicularis]
gi|380811142|gb|AFE77446.1| splicing factor 3B subunit 3 [Macaca mulatta]
gi|383417057|gb|AFH31742.1| splicing factor 3B subunit 3 [Macaca mulatta]
gi|384946118|gb|AFI36664.1| splicing factor 3B subunit 3 [Macaca mulatta]
gi|410209986|gb|JAA02212.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
gi|410260956|gb|JAA18444.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
gi|410355121|gb|JAA44164.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
Length = 1217
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 1156 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 1193
>gi|395836972|ref|XP_003791420.1| PREDICTED: splicing factor 3B subunit 3 [Otolemur garnettii]
Length = 1217
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 1156 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 1193
>gi|158256968|dbj|BAF84457.1| unnamed protein product [Homo sapiens]
Length = 1217
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 1156 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 1193
>gi|19527174|ref|NP_598714.1| splicing factor 3B subunit 3 [Mus musculus]
gi|297207121|ref|NP_001099657.2| splicing factor 3B subunit 3 [Rattus norvegicus]
gi|354477789|ref|XP_003501101.1| PREDICTED: splicing factor 3B subunit 3 [Cricetulus griseus]
gi|81879817|sp|Q921M3.1|SF3B3_MOUSE RecName: Full=Splicing factor 3B subunit 3; AltName:
Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
Short=SF3b130; AltName: Full=Spliceosome-associated
protein 130; Short=SAP 130
gi|15030278|gb|AAH11412.1| Splicing factor 3b, subunit 3 [Mus musculus]
gi|26353236|dbj|BAC40248.1| unnamed protein product [Mus musculus]
gi|27503728|gb|AAH42580.1| Splicing factor 3b, subunit 3 [Mus musculus]
gi|148679525|gb|EDL11472.1| splicing factor 3b, subunit 3 [Mus musculus]
gi|187951307|gb|AAI39016.1| Splicing factor 3b, subunit 3 [Mus musculus]
gi|187954163|gb|AAI39017.1| Splicing factor 3b, subunit 3 [Mus musculus]
gi|344248014|gb|EGW04118.1| Splicing factor 3B subunit 3 [Cricetulus griseus]
Length = 1217
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 1156 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 1193
>gi|348572800|ref|XP_003472180.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3B subunit 3-like
[Cavia porcellus]
Length = 1215
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 997 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1052
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1053 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1108
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1109 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1153
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 1154 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 1191
>gi|197246825|gb|AAI68883.1| Sf3b3 protein [Rattus norvegicus]
Length = 908
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 690 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 745
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 746 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 801
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 802 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 846
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 847 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 884
>gi|37359734|dbj|BAC97845.1| mKIAA0017 protein [Mus musculus]
Length = 1122
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 904 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 959
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 960 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1015
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1016 ------------PGGSESLVYTTLSGGIGILVPFTSYEDHDFFQHVEMHLRSEHP---PL 1060
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 1061 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 1098
>gi|19115326|ref|NP_594414.1| U2 snRNP-associated protein Sap130 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|73919127|sp|Q9UTT2.1|RSE1_SCHPO RecName: Full=Pre-mRNA-splicing factor prp12; AltName:
Full=Pre-mRNA-processing protein 12; AltName:
Full=Spliceosome-associated protein 130
gi|6451681|dbj|BAA86918.1| Prp12p/SAP130 [Schizosaccharomyces pombe]
gi|7981404|emb|CAB92100.1| U2 snRNP-associated protein Sap130 (predicted) [Schizosaccharomyces
pombe]
Length = 1206
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 115/284 (40%), Gaps = 41/284 (14%)
Query: 173 ETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM 232
E +L L T G+ +A+ P+ R LA G + + N + +R+ +
Sbjct: 923 EGKKLELISHTEIDGIPMALTPFQGR-MLAGVGRFLRI--YDLGNKKMLRKGELSAVPLF 979
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I +T +RI V D + + F Y + L D R VL+D DT D+
Sbjct: 980 ITHITVQASRIVVADSQYSVRFVVYKPEDNHLLTFADDTIHRWTTTNVLVDYDTLAGGDK 1039
Query: 293 KGSIAVLSCSDRL-----EDNA-------SPECNLTPN-----CAYHMGEIAVSIRKGSF 335
G+I +L C + + E+N+ P N TP+ + +I S++K
Sbjct: 1040 FGNIWLLRCPEHVSKLADEENSESKLIHEKPFLNSTPHKLDLMAHFFTNDIPTSLQKVQL 1099
Query: 336 IYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPL 394
+ E ++ ++ + LLG++ +F P I+ E+ + Q +
Sbjct: 1100 V----------------EGAREVLLWTGLLGTVGVFTPFINQEDVRFFQ--QLEFLLRKE 1141
Query: 395 TAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
PL G DH +RS PV ++DGD+ + L QE +
Sbjct: 1142 CPPLAGRDHLAYRSYYAPVKC--VIDGDLCEMYYSLPHPVQEMI 1183
>gi|197101659|ref|NP_001125500.1| splicing factor 3B subunit 3 [Pongo abelii]
gi|75042033|sp|Q5RBI5.1|SF3B3_PONAB RecName: Full=Splicing factor 3B subunit 3; AltName:
Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
Short=SF3b130; AltName: Full=Spliceosome-associated
protein 130; Short=SAP 130
gi|55728259|emb|CAH90875.1| hypothetical protein [Pongo abelii]
Length = 1217
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTNDEVDEDPTGNKALRDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1155
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 1156 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 1193
>gi|351712542|gb|EHB15461.1| Splicing factor 3B subunit 3 [Heterocephalus glaber]
Length = 1240
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 1022 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1077
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1078 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1133
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1134 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1178
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 1179 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 1216
>gi|109129162|ref|XP_001107025.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Macaca
mulatta]
gi|297284421|ref|XP_002802591.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Macaca
mulatta]
Length = 1199
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 981 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1036
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1037 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1092
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP PL
Sbjct: 1093 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PL 1137
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q+ V
Sbjct: 1138 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPNKQKNV 1175
>gi|242018509|ref|XP_002429717.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
gi|212514723|gb|EEB16979.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
Length = 1218
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 124/294 (42%), Gaps = 69/294 (23%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + TT A+CPY R L G + +R + +G+ + +
Sbjct: 938 LELVHKTTVDEAPAAVCPYHGR-LLVGVG-------------RMLRLYDLGKKKLLRKCE 983
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + A R+ V D ++ + Y +L D R + ++D D
Sbjct: 984 NKYIPNQIVSICATGQRVFVSDVQESVYMVRYKRQENQLIIFADDTHPRWITCTTILDYD 1043
Query: 286 TAVVSDRKGSIAVLSCSDRLEDN-------------------ASPECNLTPNCAYHMGEI 326
T +D+ G+IA++ S + D+ AS + ++ N +H+GE
Sbjct: 1044 TVATADKFGNIAIIRLSSIITDDVDEDPTGNKALWDRGLLNGASQKADVLAN--FHVGET 1101
Query: 327 AVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAV 385
+S++K + I +++ ++L G++ + +P +S E+++ + +
Sbjct: 1102 CMSLQKATLI----------------PGGSESLVYTSLSGTVGVLVPFTSREDHDFFQHL 1145
Query: 386 QARL-AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ + + HP PL G DH FRS P V ++DGD+ Q+ + +Q+++
Sbjct: 1146 EMHMRSEHP---PLCGRDHLSFRSYYYP--VKNVIDGDLCEQYNSIEPAKQKSI 1194
>gi|170041368|ref|XP_001848437.1| splicing factor 3B subunit 3 [Culex quinquefasciatus]
gi|167864946|gb|EDS28329.1| splicing factor 3B subunit 3 [Culex quinquefasciatus]
Length = 1215
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 100/224 (44%), Gaps = 38/224 (16%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ + A +R+ V D ++ I Y +L D R + L+D DT +D+
Sbjct: 988 IVNIQAMGSRVFVSDVQESIYCVKYKRAENQLIIFADDTHPRWITTSTLLDYDTVATADK 1047
Query: 293 KGSIAVL----SCSDRLEDNASPECNLTPN-------------CAYHMGEIAVSIRKGSF 335
G+++VL S SD ++++ + L C +H+GE +S++K +
Sbjct: 1048 FGNVSVLRLPHSVSDDVDEDPTGNKALWDRGLLNGASQKAENVCTFHLGETIMSLQKATL 1107
Query: 336 IYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPL 394
I ++I +T+ G++ +P +S E+++ + ++ + +
Sbjct: 1108 I----------------PGGSESLIYATMSGTVGALVPFTSREDFDFFQHLE--MHMRNE 1149
Query: 395 TAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
PL G DH FRS P V ++DGD+ QF + +Q+++
Sbjct: 1150 NPPLCGRDHLSFRSYYYP--VKNVMDGDLCEQFTSMDPAKQKSI 1191
>gi|312072035|ref|XP_003138882.1| hypothetical protein LOAG_03297 [Loa loa]
gi|307765956|gb|EFO25190.1| hypothetical protein LOAG_03297 [Loa loa]
Length = 1197
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 35/242 (14%)
Query: 219 QRVRRFAVGRTRFM-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQI 267
++VR + +G+ + + ++ + + RI V D ++ + F Y + +L I
Sbjct: 945 KKVRLYDLGKRKLLAKCENRQIPTQVVDIRSMGQRIVVSDSQESVHFMRYKKQDGQL-SI 1003
Query: 268 YCDPSQRLVADCV-LMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPN---CAYHM 323
+CD + CV L+D DT V DR G+IAVL RL + E P +
Sbjct: 1004 FCDETSPRYVTCVCLLDYDTVAVGDRFGNIAVL----RLPKGVTEEVQEDPTGVRALWDR 1059
Query: 324 GEIAVSIRKGSFIYKLPADDALGDCLASFESSQTT------IIASTLLGSIVIFIP-ISS 376
G + + +K I L +GD + S + + + +T+ G I I +P +S
Sbjct: 1060 GNLNGASQKLEAIAHL----YIGDAITSMQKTSLVPGANDCLCYTTISGIIGILVPFMSR 1115
Query: 377 EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQE 436
+E+E + ++ + + PL G DH +RS P V I+DGD+ Q+ + +Q+
Sbjct: 1116 DEFEFFQNLEMHMRVE--YPPLCGRDHLAYRSYYFP--VKSIIDGDLCEQYSLMPLDKQK 1171
Query: 437 AV 438
+V
Sbjct: 1172 SV 1173
>gi|322693432|gb|EFY85292.1| Pre-mRNA-splicing factor RSE1 [Metarhizium acridum CQMa 102]
Length = 1221
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 118/286 (41%), Gaps = 41/286 (14%)
Query: 171 ETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTR 230
+ E +L + T LA+ P+ + LA G V + Q +R+
Sbjct: 926 QEEGRELEFIHKTKIEEPALALIPFQGK-LLAGVGKTLRV--YDLGMRQMLRKAQAEVAP 982
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
I+ L +RI VGD + G+ + +Y KL D R + ++D ++
Sbjct: 983 QQIVSLNTQGSRIIVGDVQQGVTYVTYKPTTNKLIPFADDIIARWITCTTMVDYESVAGG 1042
Query: 291 DRKGSIAVLSCSDRLEDNASPECN-----------------LTPNCAYHMGEIAVSIRKG 333
D+ G++ ++ C + + A E + L C ++ +I S+ K
Sbjct: 1043 DKFGNMFIVRCPPKASEEADEEQSGLHLMNARDYLHGTSQRLDLMCHFYTQDIPTSMAKT 1102
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIH 392
S + Q ++ S L+G+I +FIP IS E+ + +++++ L
Sbjct: 1103 SLVV----------------GGQDVLLWSGLMGTIGVFIPLISREDADFFQSLESHLRTE 1146
Query: 393 PLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
PL G DH +RS P V I+DGD+ ++ L + +++ +
Sbjct: 1147 --DPPLAGRDHLMYRSYYAP--VKGIIDGDLCERYTLLPNDKKQMI 1188
>gi|224100909|ref|XP_002312063.1| predicted protein [Populus trichocarpa]
gi|222851883|gb|EEE89430.1| predicted protein [Populus trichocarpa]
Length = 1213
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 122/292 (41%), Gaps = 65/292 (22%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+C + R LA G+ +R + +G+ R +
Sbjct: 934 LELLHKTQVEGVPLALCQFQGR-LLAGIGSV-------------LRLYDLGKKRLLRKCE 979
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ F Y D +L D R + +D D
Sbjct: 980 NKLFPNSIVSIHTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTASYHVDFD 1039
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G+I + SD +E++ + + N PN +H+G++
Sbjct: 1040 TMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHIGDVVN 1099
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
S++K S I P G+C I+ T++GS+ +P +S ++ + ++
Sbjct: 1100 SLQKASLI---PGG---GEC----------IMYGTVMGSVGALLPFTSRDDVDFFSHLEM 1143
Query: 388 RL-AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
L HP PL G DH +RS P V ++DGD+ QF L Q +
Sbjct: 1144 HLRQDHP---PLCGRDHMAYRSAYFP--VKDVIDGDLCEQFPTLPLDAQRKI 1190
>gi|294875343|ref|XP_002767276.1| spliceosome factor, putative [Perkinsus marinus ATCC 50983]
gi|239868839|gb|EEQ99993.1| spliceosome factor, putative [Perkinsus marinus ATCC 50983]
Length = 1258
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 42/286 (14%)
Query: 173 ETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM 232
E++ L+L + T G+ A+ P+ R +A G+ P P +R + +G+ R +
Sbjct: 972 ESYNLQLIHVTPLEGVPSAMYPFEGRLLVALRGS-------PTVAPV-LRIYELGKKRLL 1023
Query: 233 -------------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADC 279
IM L + RI D RD IL + +++ I D R +
Sbjct: 1024 KKCEYKFLPESGGIMWLDVNKDRIFAADSRDSILVLRWRYSDNQMQVISDDTYPRCITAA 1083
Query: 280 VLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKL 339
++D +T VV D+ +IAVL R+ +A + Y G +F L
Sbjct: 1084 AVLDYNTIVVGDKFDNIAVL----RVPGDAKDAGAWGRDNDYASGN--------TFKMDL 1131
Query: 340 PADDALGDCLASFE------SSQTTIIASTLLGSIVIFIPISSE-EYELLEAVQARLAIH 392
+G+ + S + +I ST+LG+I P SS+ E+ L+A++ +
Sbjct: 1132 IGHFHVGETITSLQRVTMVAGGAEIVIYSTVLGTIGALYPFSSKREHGFLQALEMHMRNT 1191
Query: 393 PLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ L G +H +RS +P + +D D+ + +L + +Q +
Sbjct: 1192 AASPSLTGREHVMYRSFYHP--IKNFVDADLCEVYYQLPAEKQRQI 1235
>gi|224109600|ref|XP_002315251.1| predicted protein [Populus trichocarpa]
gi|222864291|gb|EEF01422.1| predicted protein [Populus trichocarpa]
Length = 1213
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 121/292 (41%), Gaps = 65/292 (22%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+C + R LA G+ +R + +G+ R +
Sbjct: 934 LELLHKTQVEGVPLALCQFQGR-LLAGIGSV-------------LRLYDLGKKRLLRKCE 979
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ F Y D +L D R + +D D
Sbjct: 980 NKLFPNTIVSIHTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRWLTSSYHVDFD 1039
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
+ +D+ G+I SD +E++ + + N PN +H+G++
Sbjct: 1040 SMAGADKFGNIYFARLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHIGDVVN 1099
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
S++K S I P G+C II T++GS+ +P +S ++ + ++
Sbjct: 1100 SLQKASLI---PGG---GEC----------IIYGTVMGSVGALLPFTSRDDVDFFSHLEM 1143
Query: 388 RL-AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
L HP PL G DH +RS P V ++DGD+ QF L Q +
Sbjct: 1144 HLRQDHP---PLCGRDHMSYRSAYFP--VKDVIDGDLCEQFPTLPLDAQRKI 1190
>gi|322707263|gb|EFY98842.1| Pre-mRNA-splicing factor rse-1 [Metarhizium anisopliae ARSEF 23]
Length = 1212
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 117/286 (40%), Gaps = 41/286 (14%)
Query: 171 ETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTR 230
+ E +L + T LA+ P+ + LA G V + Q +R+
Sbjct: 926 QEEGRELEFIHKTKIEEPALALIPFQGK-LLAGVGKTLRV--YDLGMRQMLRKAQAEVAP 982
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
I+ L +RI VGD + G+ + +Y KL D R ++D ++
Sbjct: 983 QQIVSLNTQGSRIIVGDIQQGVTYVTYKPTTNKLIPFADDTIARWTTCTTMVDYESVAGG 1042
Query: 291 DRKGSIAVLSCSDRLEDNASPECN-----------------LTPNCAYHMGEIAVSIRKG 333
D+ G++ ++ C + + A E + L C ++ +I S+ K
Sbjct: 1043 DKFGNMFIVRCPPKASEEADEEQSGLHLMNARDYLHGTSQRLDLMCHFYTQDIPTSMAKT 1102
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIH 392
S + Q ++ S L+G+I +FIP IS E+ + +++++ L
Sbjct: 1103 SLVV----------------GGQDVLLWSGLMGTIGVFIPLISREDADFFQSLESHLRTE 1146
Query: 393 PLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
PL G DH +RS P V I+DGD+ ++ L + +++ +
Sbjct: 1147 --DPPLAGRDHLMYRSYYAP--VKGIIDGDLCERYTLLPNDKKQMI 1188
>gi|389586447|dbj|GAB69176.1| splicing factor 3B subunit 3 [Plasmodium cynomolgi strain B]
Length = 1286
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 122/283 (43%), Gaps = 41/283 (14%)
Query: 174 TWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM- 232
++L L + T CP+ R LAS GN ++R +A+G+ + +
Sbjct: 1004 NYKLNLLHITPVEDQPFCFCPFNGR-LLASIGN-------------KLRIYALGKKKLLK 1049
Query: 233 ----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLM 282
I+ + RI D R+ +L + Y + L I D R + ++
Sbjct: 1050 KCEYKDIPEAIISIKVSGDRIFASDIRESVLIFFYDSNMNTLRLISDDIIPRWITCSEIL 1109
Query: 283 DVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPAD 342
D T + +D+ S+ VL R+ + A E N ++ GEI K + + +
Sbjct: 1110 DHHTIMAADKFDSVFVL----RVPEEAKQEEYGISNKCWYGGEIMAGSNKNRRLEHIMSF 1165
Query: 343 DALGDCLASFE------SSQTTIIASTLLGSIVIFIPI-SSEEYELLEAVQARLAIHPLT 395
+G+ + S + +S II ST++G+I FIP + EE EL + ++ + +
Sbjct: 1166 H-VGEIVTSLQKVKLSPTSSECIIYSTIMGTIGAFIPYDNKEELELTQHLE--IILRTEN 1222
Query: 396 APLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
PL G +H FRS +P V ++DGD+ QF L Q V
Sbjct: 1223 PPLCGREHIFFRSYYHP--VQHVIDGDLCEQFSSLPYDVQRKV 1263
>gi|170580631|ref|XP_001895346.1| splicing factor 3B subunit 3 [Brugia malayi]
gi|158597745|gb|EDP35799.1| splicing factor 3B subunit 3, putative [Brugia malayi]
Length = 1181
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 111/242 (45%), Gaps = 35/242 (14%)
Query: 219 QRVRRFAVGRTRFM-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQI 267
++VR + +G+ + + ++ + + RI V D ++ + F Y + +L I
Sbjct: 929 KKVRLYDLGKRKLLAKCENRQIPTQVVDIRSMGQRIVVSDSQESVHFMRYKKQDGQL-SI 987
Query: 268 YCDPSQRLVADCV-LMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPN---CAYHM 323
+CD + CV L+D DT V DR G++AVL RL + E P +
Sbjct: 988 FCDETSPRYVTCVCLLDYDTVAVGDRFGNVAVL----RLPKGVTEEVQEDPTGVRALWDR 1043
Query: 324 GEIAVSIRKGSFIYKLPADDALGDCLASFESSQTT------IIASTLLGSIVIFIP-ISS 376
G + + +K I L +GD + S + + + +T+ G I I +P +S
Sbjct: 1044 GNLNGASQKLEAIAHL----YIGDAITSMQKTSLVPGANDCLSYTTISGIIGILVPFMSR 1099
Query: 377 EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQE 436
+E+E + ++ + + PL G DH +RS P V ++DGD+ Q+ + +Q+
Sbjct: 1100 DEFEFFQNLEMHMRVE--YPPLCGRDHLAYRSYYFP--VKSVIDGDLCEQYSLMPLDKQK 1155
Query: 437 AV 438
+V
Sbjct: 1156 SV 1157
>gi|402077250|gb|EJT72599.1| pre-mRNA-splicing factor RSE1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1216
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 12/212 (5%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI VGD + G+++ +Y ++A KL D QR ++D ++ D
Sbjct: 988 VIVSLQTQGSRIVVGDSQHGLIYVAYKQEANKLIAFADDSIQRWTTCSTMVDYESTAGGD 1047
Query: 292 RKGSIAVLSCSDRLE---DNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
+ G+I +L C ++ D E +L Y G S R + D A C
Sbjct: 1048 KFGNIWILRCPEKASQEADQPGSEVHLMHARDYLHG---TSNRLALMAHVYTQDIATSIC 1104
Query: 349 LASF-ESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEF 406
+ Q ++ + G+I + IP +S E+ + + ++ + PL G DH +
Sbjct: 1105 KTNLVVGGQEVLLWGGIQGTIGVLIPFVSREDADFFQTLEQHMRSE--DPPLAGRDHLMY 1162
Query: 407 RSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
RS P V ++DGD+ +F L + +++ +
Sbjct: 1163 RSYYVP--VKGVIDGDLCERFTMLPNDKKQMI 1192
>gi|391341059|ref|XP_003744849.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Metaseiulus
occidentalis]
Length = 1223
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 117/286 (40%), Gaps = 51/286 (17%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
+L L ++T + A+C + +R L G + F + +R+ +I+
Sbjct: 942 ELELVHTTVMDDVPQAMCNFGNR-VLIGVGRCLRIYDF--GKKKMLRKCENKHIPNLIVT 998
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGS 295
+ A RI VGD ++ F Y +L D + R ++D T V D+ G+
Sbjct: 999 INAVGNRIVVGDVQESFFFIRYRMLENQLIIFADDFTPRWTTAACMVDYRTVVGGDKFGN 1058
Query: 296 IAVLSCSDRLEDNASPECNLTPN---------------------CAYHMGEIAVSIRKGS 334
+ +L RL N S + + P H+GE+ VS++K +
Sbjct: 1059 VYIL----RLPGNTSDDVDEDPTGVRSLWDRGWLGGAGQKAEVLSMTHVGELIVSLQKTA 1114
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAI-H 392
I P I+ +T+ G + IP SS +++E + ++ + H
Sbjct: 1115 LIPGGPE----------------AIVYTTIAGGVGALIPFSSKDDHEFFQHLEMYMRTEH 1158
Query: 393 PLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
P P+ G DH FRS P V ++DGD+ Q+ L + +Q+ +
Sbjct: 1159 P---PICGRDHLSFRSYYFP--VKAVIDGDLCEQYNSLDANKQKQI 1199
>gi|452986188|gb|EME85944.1| hypothetical protein MYCFIDRAFT_59215 [Pseudocercospora fijiensis
CIRAD86]
Length = 1223
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 115/273 (42%), Gaps = 25/273 (9%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNP-QRVRRFAVGRTRFMIM 234
+L + T + V A+ P+ R L GN ++ ++ R AV I+
Sbjct: 942 ELEFVHKTKFELPVYALMPFRGRLALG-VGNELFIYDMGMKALLRKARNIAVPN---QIV 997
Query: 235 LLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKG 294
L + RI GD +G+ + Y +L D QR ++D +TA D+ G
Sbjct: 998 SLESQGNRIICGDVSEGVTYLVYKPTFNRLIPFVDDTVQRWTTTTTMVDYETAAGGDKFG 1057
Query: 295 SIAVLSCSDRLEDNASPECNLTPNCAYHMGEIA--------VSIRKGSFIYKLPADDALG 346
++ ++ C ++ S E + Y M E + + +R F +P
Sbjct: 1058 NLWIVRCPEQ----PSQEADEEGAGGYIMNERSYLNGAPYRLDLRAHYFCQDIPMSMQRT 1113
Query: 347 DCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSE 405
+A Q + S L G++ I IP ++ E+ E A++ ++ PL G DH
Sbjct: 1114 ALVA---GGQEVLFWSGLQGTLGILIPFVTREDVEFFTALEQQMRTE--DPPLAGRDHLM 1168
Query: 406 FRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+RS P V ++DGD+L +F+ L+ ++ +
Sbjct: 1169 YRSYYVP--VKGVIDGDLLERFMGLSYDTKQKI 1199
>gi|302807210|ref|XP_002985318.1| hypothetical protein SELMODRAFT_181612 [Selaginella moellendorffii]
gi|300147146|gb|EFJ13812.1| hypothetical protein SELMODRAFT_181612 [Selaginella moellendorffii]
Length = 1207
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 117/292 (40%), Gaps = 65/292 (22%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ A+C + R LA G Q +R + +G+ + +
Sbjct: 928 LELVHKTPIDGVPTALCQFQGR-LLAGIG-------------QILRIYDLGKRKLLRKCE 973
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I + ++ RI VGD ++ + Y D +L D S R + + +D D
Sbjct: 974 NKNFPNTITSIHSYGDRIYVGDIQESFHYVKYRRDENQLYAFADDSSPRWLTASLHIDFD 1033
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T D+ G++ + S+ +ED+ + N PN +H+GE+
Sbjct: 1034 TMAAGDKFGNLFFVRLPQDLSEEIEDDPTGGKIKWEQGRLNGAPNKVEEIIQFHVGEVVT 1093
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
++K S I ++I T++GS+ +P SS E+ + ++
Sbjct: 1094 CMQKASLI----------------PGGGESVIYGTVMGSVGALLPFSSREDVDFFSHLEM 1137
Query: 388 RL-AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ HP PL G DH FRS P V ++DGD+ Q+ L Q +
Sbjct: 1138 HMRQEHP---PLCGRDHMAFRSAYFP--VKDVIDGDLCEQYPTLPPDLQRKI 1184
>gi|156095699|ref|XP_001613884.1| Splicing factor 3B subunit 3 [Plasmodium vivax Sal-1]
gi|148802758|gb|EDL44157.1| Splicing factor 3B subunit 3, putative [Plasmodium vivax]
Length = 1230
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 122/283 (43%), Gaps = 41/283 (14%)
Query: 174 TWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM- 232
++L L + T CP+ R LAS GN ++R +A+G+ + +
Sbjct: 948 NYKLNLLHITPVEDQPFCFCPFNGR-LLASIGN-------------KLRIYALGKKKLLK 993
Query: 233 ----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLM 282
I+ + RI D R+ +L + Y + L I D R + ++
Sbjct: 994 KCEYKDIPEAIISIKVSGDRIFASDIRESVLIFFYDANMNTLRLISDDIIPRWITCSEIL 1053
Query: 283 DVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPAD 342
D T + +D+ S+ VL R+ + A E N ++ GEI K + + +
Sbjct: 1054 DHHTIMAADKFDSVFVL----RVPEEAKQEEYGISNKCWYGGEIMAGSNKNRRLEHIMSF 1109
Query: 343 DALGDCLASFE------SSQTTIIASTLLGSIVIFIPI-SSEEYELLEAVQARLAIHPLT 395
+G+ + S + +S II ST++G+I FIP + EE EL + ++ + +
Sbjct: 1110 H-VGEIVTSLQKVKLSPTSSECIIYSTIMGTIGAFIPYDNKEELELTQHLE--IILRTEN 1166
Query: 396 APLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
PL G +H FRS +P V ++DGD+ QF L Q V
Sbjct: 1167 PPLCGREHIFFRSYYHP--VQHVIDGDLCEQFSSLPYDVQRKV 1207
>gi|302773427|ref|XP_002970131.1| hypothetical protein SELMODRAFT_171237 [Selaginella moellendorffii]
gi|300162642|gb|EFJ29255.1| hypothetical protein SELMODRAFT_171237 [Selaginella moellendorffii]
Length = 1207
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 117/292 (40%), Gaps = 65/292 (22%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ A+C + R LA G Q +R + +G+ + +
Sbjct: 928 LELVHKTPIDGVPTALCQFQGR-LLAGIG-------------QILRIYDLGKRKLLRKCE 973
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I + ++ RI VGD ++ + Y D +L D S R + + +D D
Sbjct: 974 NKNFPNTITSIHSYGDRIYVGDIQESFHYVKYRRDENQLYAFADDSSPRWLTASLHIDFD 1033
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T D+ G++ + S+ +ED+ + N PN +H+GE+
Sbjct: 1034 TMAAGDKFGNLFFVRLPQDLSEEIEDDPTGGKIKWEQGRLNGAPNKVEEIIQFHVGEVVT 1093
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
++K S I ++I T++GS+ +P SS E+ + ++
Sbjct: 1094 CMQKASLI----------------PGGGESVIYGTVMGSVGALLPFSSREDVDFFSHLEM 1137
Query: 388 RL-AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ HP PL G DH FRS P V ++DGD+ Q+ L Q +
Sbjct: 1138 HMRQEHP---PLCGRDHMAFRSAYFP--VKDVIDGDLCEQYPTLPPDLQRKI 1184
>gi|328771718|gb|EGF81757.1| hypothetical protein BATDEDRAFT_34564 [Batrachochytrium dendrobatidis
JAM81]
Length = 1248
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 131/320 (40%), Gaps = 77/320 (24%)
Query: 184 TWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRT---------RFMIM 234
T G VLA+C +++ Y LASAG+ Y +++ AV RT +I
Sbjct: 901 TLNGPVLALCTFVNSYLLASAGSTLY----------QLKIEAVHRTITAGASIDINSIIT 950
Query: 235 LLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKG 294
+ A T+I + + +D I Y + + I D + R+ ++C +D + +DR G
Sbjct: 951 RIHALKTQIFIANTQDSISVYKFDIATKAFAFIKSDVTSRVGSECFPLDDSLVIGTDRHG 1010
Query: 295 SIAVLSCSDRLEDNASPEC----NLTPNCAYHMGEIAVSIRKGSFIYKLP---------- 340
+I L +++ ED+ + E ++ +H+ +I + ++ GS ++L
Sbjct: 1011 NIYGLD-TNQGEDSDTHESTDSQSMQTGFEFHILDIVLQLKPGSMKHRLQQITSATAAEH 1069
Query: 341 ---ADDALGDCLASFE---------------------------SSQTTIIASTLLGSIVI 370
DD + L + + S +I + G VI
Sbjct: 1070 TSFTDDRMISELDTLDKGWWSNNGTALSKPMQKLYHVSTAENVSISNEVIEQRVHGGQVI 1129
Query: 371 F-----------IPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKIL 419
+ + + S+ Y LE +Q LA T PLLGND FRS + K +
Sbjct: 1130 YGATLSGGLIAMLRLRSDVYIALEILQNVLAEFEQTRPLLGNDFKTFRSGSGE--LKKCI 1187
Query: 420 DGDMLSQFLELTSTQQEAVL 439
DG +SQFL L+ + V+
Sbjct: 1188 DGQFVSQFLLLSDEIAQEVM 1207
>gi|301604148|ref|XP_002931705.1| PREDICTED: splicing factor 3B subunit 3 [Xenopus (Silurana)
tropicalis]
Length = 1217
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 94/220 (42%), Gaps = 48/220 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ + D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 999 RVILSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTSCLLDYDTVAGADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTPN---------------------CAYHMGEIAVSIRKGSFIYKLP 340
RL N + + + P YH+GE +S++K + I
Sbjct: 1055 IVRLPSNTNDDVDEDPTGNKALWDRGLLNGASQKAEVIVNYHVGETVLSVQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPL 398
+++ +TL G I I +P +S E+++ + V+ L + HP P+
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PI 1155
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q++V
Sbjct: 1156 CGRDHLSFRSYYFP--VKNVIDGDLCEQFNSMEPVKQKSV 1193
>gi|391341057|ref|XP_003744848.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Metaseiulus
occidentalis]
Length = 1211
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 117/286 (40%), Gaps = 51/286 (17%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
+L L ++T + A+C + +R L G + F + +R+ +I+
Sbjct: 930 ELELVHTTVMDDVPQAMCNFGNR-VLIGVGRCLRIYDF--GKKKMLRKCENKHIPNLIVT 986
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGS 295
+ A RI VGD ++ F Y +L D + R ++D T V D+ G+
Sbjct: 987 INAVGNRIVVGDVQESFFFIRYRMLENQLIIFADDFTPRWTTAACMVDYRTVVGGDKFGN 1046
Query: 296 IAVLSCSDRLEDNASPECNLTPN---------------------CAYHMGEIAVSIRKGS 334
+ +L RL N S + + P H+GE+ VS++K +
Sbjct: 1047 VYIL----RLPGNTSDDVDEDPTGVRSLWDRGWLGGAGQKAEVLSMTHVGELIVSLQKTA 1102
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAI-H 392
I P I+ +T+ G + IP SS +++E + ++ + H
Sbjct: 1103 LIPGGPE----------------AIVYTTIAGGVGALIPFSSKDDHEFFQHLEMYMRTEH 1146
Query: 393 PLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
P P+ G DH FRS P V ++DGD+ Q+ L + +Q+ +
Sbjct: 1147 P---PICGRDHLSFRSYYFP--VKAVIDGDLCEQYNSLDANKQKQI 1187
>gi|388855100|emb|CCF51231.1| probable splicing factor 3B subunit 3 [Ustilago hordei]
Length = 1221
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 19/270 (7%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
+L + + T + L + P+ R LA G A + + + +R+ I+
Sbjct: 939 ELEVHHKTEIDDIPLVLRPFQGR-LLAGVGKALRI--YDLGKKKLLRKCENKSFPTAIVS 995
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGS 295
L A +RI VGD ++ I+F SY +L D + V C ++D DT +D+ G+
Sbjct: 996 LDAQGSRIVVGDMQESIVFTSYKPLENRLVTFADDVMPKFVTRCTMLDYDTVAAADKFGN 1055
Query: 296 IAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESS 355
+ VL R++ + S + P + E V + + L A +GD + S +
Sbjct: 1056 LYVL----RIDADTSRSVDEDPTGMTIVHEKPV-LMGAAHKATLLAHYFVGDIITSLNRT 1110
Query: 356 ------QTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRS 408
+ ++ + + G+I +P +S E+ + L +Q +L L+G DH +RS
Sbjct: 1111 VMVPGGREVLMYTGISGTIGALVPFVSKEDVDTLSTLQTQLRQE--NNSLVGRDHLAYRS 1168
Query: 409 RENPVGVPKILDGDMLSQFLELTSTQQEAV 438
P V ++DGD+ F L +Q A+
Sbjct: 1169 SYAP--VKSVIDGDLCETFGLLQPAKQNAI 1196
>gi|307111604|gb|EFN59838.1| hypothetical protein CHLNCDRAFT_29381 [Chlorella variabilis]
Length = 1108
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 108/238 (45%), Gaps = 31/238 (13%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
+ VGD I ++ E+ LE D ++ ++D DT + ++ ++ +
Sbjct: 896 VVVGDLMKSIQLLAWGEEEGALELRARDFHPNWMSAVTVLDDDTYMGAENSYNLFTVR-- 953
Query: 303 DRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTII 360
R D A+ E L YH+GE + GS + +LP D L S T++
Sbjct: 954 -RNADAATDEERSRLETVGRYHLGEFVNRFQPGSLVMRLP-DSEL--------SQIPTVL 1003
Query: 361 ASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSREN----PVGVP 416
T+ G I + + +Y+LLE++Q A+ + + G DH+++R+ N
Sbjct: 1004 FGTINGVIGVVASLPHAQYQLLESLQE--AMRKVVKGVGGFDHAQWRAFSNQHMPATPAR 1061
Query: 417 KILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLERVH 474
+ +DGD++ QFL+L EAV++ G T+++ V Q+V+ L R+H
Sbjct: 1062 QFVDGDLIEQFLDLKRDSAEAVIAAMAGGGATVES-----------VTQLVEELSRLH 1108
>gi|389614684|dbj|BAM20371.1| spliceosomal protein sap, partial [Papilio polytes]
Length = 541
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 105/238 (44%), Gaps = 31/238 (13%)
Query: 221 VRRFAVGRTRFMIMLLTAHF-----------TRIAVGDCRDGILFYSYHEDARKLEQIYC 269
+R + +GR + + H RI V D ++ + Y + +L
Sbjct: 291 LRMYDIGRRKLLRKCENRHIPNLIADIKTIGQRIFVADVQESVFCVKYKKRENQLIIFAD 350
Query: 270 DPSQRLVADCVLMDVDTAVVSDRKGSIAVL----SCSDRLEDNASPECNLTP----NCAY 321
D + R + + ++D DT +SD+ G++AV+ S SD ++++ + L N A
Sbjct: 351 DTNPRWITNTCVLDYDTVAMSDKFGNVAVMRLPHSVSDDVDEDPTGNKALWDRGLLNGAS 410
Query: 322 HMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYE 380
GE+ V+ G + L + ++ +T G++ +P +S E+++
Sbjct: 411 QKGEVVVNFHVGETVTSLQRATLI-------PGGSEALLYATAGGALGALLPFTSREDHD 463
Query: 381 LLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ ++ + + APL G DH FRS P V ++DGD+ QF L +Q+A+
Sbjct: 464 XFQHLE--MHMRSENAPLCGRDHLSFRSYYYP--VKNVIDGDLCEQFNSLEPAKQKAI 517
>gi|323508292|emb|CBQ68163.1| probable splicing factor 3B subunit 3 [Sporisorium reilianum SRZ2]
Length = 1221
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 119/273 (43%), Gaps = 25/273 (9%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRV---RRFAVGRTRFM 232
+L + + T + L + P+ R LA G A + R + FA
Sbjct: 939 ELEVLHKTEVDDIPLVLRPFQGR-LLAGIGKALRIYDLGKKKLLRKCENKSFATA----- 992
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L A +RI VGD ++ I+F SY +L D + V C ++D DT +D+
Sbjct: 993 IVSLDAQGSRIVVGDMQESIIFTSYKPLENRLVTFADDVMPKFVTRCAMLDYDTVAAADK 1052
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASF 352
G++ VL R++ + S + P + E V + + L A +GD + S
Sbjct: 1053 FGNVYVL----RIDADTSRSVDEDPTGMTIVHEKPV-LMGAAHKATLVAHFFVGDIVTSL 1107
Query: 353 ESS------QTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSE 405
+ + ++ + + G+I +P +S E+ + L +++ L + L+G DH
Sbjct: 1108 NRTVMVPGGREVLLYTGVSGTIGALVPFVSKEDVDTLSTLESHLRQE--NSSLVGRDHLA 1165
Query: 406 FRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+RS P V ++DGD+ F L +Q A+
Sbjct: 1166 YRSSYAP--VKSVIDGDLCETFGLLPPAKQNAI 1196
>gi|326432370|gb|EGD77940.1| splicing factor 3b subunit 3 [Salpingoeca sp. ATCC 50818]
Length = 1232
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 115/290 (39%), Gaps = 69/290 (23%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
+L + T M A+ P+ R +A GN VR + +GR + +
Sbjct: 951 KLDFVHRTEVEAMPCALTPFAGR-LIAGVGNI-------------VRIYDMGRKKLLRKC 996
Query: 236 LTAHF-----------TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQ-RLVADCVLMD 283
H TR+ V D R+ + F Y L ++CD + R +++D
Sbjct: 997 ENKHLPSRVVDIEVMGTRVVVADQRESVFFLKYKPTENVL-SVFCDDTTPRWCTAMLMVD 1055
Query: 284 VDTAVVSDRKGSIAVLSCSDRLED------------------NASPECNLTPNCAYHMGE 325
T V+D+ G+++VL C D + D N +P+ L +++GE
Sbjct: 1056 YSTVCVADKFGNVSVLRCPDDVTDTLQEDPSGAKAFWARGYLNGAPQ-KLVQVANFYIGE 1114
Query: 326 IAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPIS-SEEYELLEA 384
I S+ K + S I +TL GSI +P S E+ E +
Sbjct: 1115 IVQSLHKTTLT----------------PSGTECIAYTTLSGSIGALMPFSHKEDAEFFQT 1158
Query: 385 VQARL-AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTST 433
++ L HP P+ G DH FRS P ++DGD+ ++ L+++
Sbjct: 1159 LELHLRQEHP---PICGRDHLAFRSAYVP--CKSVIDGDLCEEYNMLSAS 1203
>gi|328717412|ref|XP_003246201.1| PREDICTED: splicing factor 3B subunit 3-like [Acyrthosiphon pisum]
Length = 1218
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 125/283 (44%), Gaps = 47/283 (16%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLL 236
L L + TT + AIC + R + G + + + +R+ + +IM +
Sbjct: 938 LELVHKTTVDNVPTAICGFQGRVII---GIGRILRLYDIGKKKLLRKCENKQIPLLIMGI 994
Query: 237 TAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQ-RLVADCVLMDVDTAVVSDRKGS 295
RI V D ++ + Y + +L I+ D +Q R + ++D +T +D+ G+
Sbjct: 995 RVMGCRIYVSDVQESVYMVRYKRNENQL-IIFADDTQPRYITAMEILDYNTVATADKCGN 1053
Query: 296 IAVL----SCSDRLEDN---------------ASPECNLTPNCAYHMGEIAVSIRKGSFI 336
I+V+ S SD ++D+ AS + + N +H+GEI SI+K + I
Sbjct: 1054 ISVVRLASSISDEVDDDPTGNKSLWDRGLLNGASQKADFIVN--FHIGEICTSIQKATLI 1111
Query: 337 YKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLT 395
+++ +T+ G+I + +P ++ EE + + ++ + +
Sbjct: 1112 ----------------PGGSESLVYATVTGTIGVLVPFTAHEEQDFFQHLE--MHMRSEN 1153
Query: 396 APLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
PL G DH +RS P V + DGD+ Q+ + +Q+++
Sbjct: 1154 PPLCGRDHLSYRSYYFP--VKNVCDGDLCEQYNSIDIAKQKSI 1194
>gi|348503892|ref|XP_003439496.1| PREDICTED: splicing factor 3B subunit 3-like [Oreochromis niloticus]
Length = 1217
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 99/217 (45%), Gaps = 42/217 (19%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL-- 299
R+ V D ++ + + Y + +L D R V L+D DT +D+ G+I+++
Sbjct: 999 RVIVSDVQESLFWVRYRRNENQLIIFADDTYPRWVTTACLLDYDTMAAADKFGNISIVRL 1058
Query: 300 --SCSDRLEDN---------------ASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPAD 342
+ SD ++++ AS + + N YH+GE +S++K + I
Sbjct: 1059 PPNTSDDVDEDPTGNKALWDRGLLNGASQKAEIIMN--YHVGETVLSLQKTTLI------ 1110
Query: 343 DALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGN 401
+++ +TL G I I +P +S E+++ + ++ + + PL G
Sbjct: 1111 ----------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHLE--MHMRSEFPPLCGR 1158
Query: 402 DHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
DH FRS P V ++DGD+ QF + +Q++V
Sbjct: 1159 DHLSFRSYYFP--VKNVIDGDLCEQFNSMDPHKQKSV 1193
>gi|380490733|emb|CCF35810.1| pre-mRNA-splicing factor rse-1 [Colletotrichum higginsianum]
Length = 1212
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 12/225 (5%)
Query: 219 QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVAD 278
Q +R+ +I+ L+ +RI VGD + GI + Y KL D R V
Sbjct: 971 QMLRKAQADVAPQLIVSLSTQGSRIIVGDVQHGITYVVYKPTTNKLIPFVDDTISRWVTC 1030
Query: 279 CVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECN----LTPNCAYHMGEIAVSIRKGS 334
++D ++ V D+ G+I ++ C ++ A E L H +S+ S
Sbjct: 1031 TTMVDYESVVGGDKFGNIFLVRCPEKASQEADEESGGLHLLNTRDYLHGTPHRLSLLGHS 1090
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHP 393
+ +P + Q ++ S + G+I +FIP ++ E+ + + ++ +
Sbjct: 1091 YTQDVPTSITKTSLVVG---GQDVLLWSGINGTIGVFIPFVTREDVDFFQNLEQHMRTE- 1146
Query: 394 LTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
APL G DH +RS P V ++DGD+ ++ L S +++ +
Sbjct: 1147 -DAPLAGRDHLMYRSYYVP--VKGVIDGDLCERYTLLPSEKKQMI 1188
>gi|5817204|emb|CAB53699.1| hypothetical protein [Homo sapiens]
Length = 215
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 48/215 (22%)
Query: 247 DCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLE 306
D ++ ++ Y + +L D R V L+D DT +D+ G+I V+ RL
Sbjct: 2 DVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVV----RLP 57
Query: 307 DNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLPADDAL 345
N + E + P N A YH+GE +S++K + I
Sbjct: 58 PNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI--------- 108
Query: 346 GDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPLLGNDH 403
+++ +TL G I I +P +S E+++ + V+ L + HP PL G DH
Sbjct: 109 -------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP---PLCGRDH 158
Query: 404 SEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
FRS PV ++DGD+ QF + +Q+ V
Sbjct: 159 LSFRSYYFPVK--NVIDGDLCEQFNSMEPNKQKNV 191
>gi|301110252|ref|XP_002904206.1| pre-mRNA-splicing factor RSE1 [Phytophthora infestans T30-4]
gi|262096332|gb|EEY54384.1| pre-mRNA-splicing factor RSE1 [Phytophthora infestans T30-4]
Length = 1197
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 115/289 (39%), Gaps = 50/289 (17%)
Query: 172 TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRF 231
E QL L ++T + A+C + R L S G A + +++ R R
Sbjct: 914 VEGMQLVLVHTTEIDDIPHAMCEFQGR-LLVSVGRALRIYDL---GKKKMLRKCENRNFP 969
Query: 232 MIML-LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
I++ L A RI D + F Y +D +L D R + VL+D DT +
Sbjct: 970 SILVELKAAGDRIYASDMHESFHFVKYKKDENQLVIFADDCVPRFITSSVLLDYDTLCGA 1029
Query: 291 DRKGSIAVL----SCSDRLED-------------NASPECNLTPNCAYHMGEIAVSIRKG 333
D+ G++ V SD +++ N +P L +H+G++ S+ +
Sbjct: 1030 DKFGNVFVSRLPSEVSDEIDNPTGNRILWDSGLLNGAPN-KLEQVAQFHVGDVVTSMVRS 1088
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE----YELLEAVQARL 389
S + +I +T++G I IP +S E Y LE +
Sbjct: 1089 SLV----------------PGGTEAVIYATIMGRIGALIPFTSREDVDFYTHLE-----M 1127
Query: 390 AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ PL G DH +RS PV I DGD+ QF L+ +Q +V
Sbjct: 1128 YMRQEQPPLCGRDHLSYRSYYIPV--KNITDGDLCEQFSSLSVEKQASV 1174
>gi|223647430|gb|ACN10473.1| Splicing factor 3B subunit 3 [Salmo salar]
Length = 1217
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 46/219 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ + + Y + +L D R V L+D DT +D+ G+I+++
Sbjct: 999 RVIVTDVQESLFWVRYKRNENQLIIFADDTHPRWVTTACLLDYDTMASADKFGNISIV-- 1056
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N S + + P N A YH+GE +S++K + I
Sbjct: 1057 --RLPPNTSDDVDEDPTGNKALWDRGLLNGASQKAEVIMNYHIGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLL 399
+++ +TL G I I +P +S E+++ + ++ + + PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHLE--MHMRSEFPPLC 1156
Query: 400 GNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q++V
Sbjct: 1157 GRDHLSFRSYYFP--VKNVIDGDLCEQFNSMDPHKQKSV 1193
>gi|403411971|emb|CCL98671.1| predicted protein [Fibroporia radiculosa]
Length = 1212
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 135/346 (39%), Gaps = 61/346 (17%)
Query: 119 DCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSS----PDDASCDGIKLEETET 174
D F S S R+ +VG A + + C+S + DG LE
Sbjct: 877 DNNEAAFSLAVVSFSARSGELHLVVGTAQDTFLAPRSCTSGFLRTYRFTDDGTNLE---- 932
Query: 175 WQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIM 234
L + T + LA+ + R +A G A + + + +R+ I+
Sbjct: 933 ----LLHKTETNDVPLAVLGFQGR-LVAGVGKALRL--YDMGKKKLLRKVENKTFASAIV 985
Query: 235 LLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKG 294
L +RI VGD ++ + F Y KL D R + ++D +T +DR G
Sbjct: 986 SLATQGSRILVGDMQESVSFAVYKPPENKLLVFADDTQPRWTSAMTMVDYNTVASADRFG 1045
Query: 295 SIAVLSCSDRLEDNASPECNLTPNCA---------------------YHMGEIAVSIRKG 333
+I V +RL+ S + + P A +H+G+I SI K
Sbjct: 1046 NIYV----NRLDPKVSEQVDDDPTGAGILHEKGLLAGAPHKTELLSHFHVGDIVTSINKV 1101
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIH 392
S + + ++ + L G+I I +P +S E+ + + ++ +
Sbjct: 1102 SLV----------------AGGREVLLYTGLHGTIGILVPFVSKEDVDFISTLEQHMRTE 1145
Query: 393 PLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
L+ L+G DH +R PV ++DGD+ F L +++Q A+
Sbjct: 1146 QLS--LVGRDHLTWRGYYVPVKA--VVDGDLCETFARLPASKQSAI 1187
>gi|399216895|emb|CCF73582.1| unnamed protein product [Babesia microti strain RI]
Length = 1232
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 95/227 (41%), Gaps = 39/227 (17%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
F +M L A RI VGD R+ I + E KL I D R + ++D T +
Sbjct: 1003 FGVMWLGASGNRIFVGDIRESITVLKFDEQMAKLSLICDDIRPRWITGATVLDHHTVALV 1062
Query: 291 DRKGSIAVLSC-SDRLEDNASPECN-----------------LTPNCAYHMGEIAVSIRK 332
D+ + AV S+ N S N +H+G+++ I K
Sbjct: 1063 DKFDTFAVCRVPSEASASNLSSALNSGSLEAVMPTILGVGNKFEQEAQFHLGDLSTCIDK 1122
Query: 333 GSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAI 391
+ C E+ ++ +T+LGSI IP ISS+E + L+ ++ +A
Sbjct: 1123 VTL------------CSGCTEA----VVYATILGSIGALIPFISSDELDTLQHLELLMAN 1166
Query: 392 HPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
PL G +HS +RS P V ++DGD+ +F L S Q +
Sbjct: 1167 E--NPPLSGREHSIYRSYYGP--VQHVIDGDLCEEFESLDSITQSRI 1209
>gi|221061705|ref|XP_002262422.1| splicing factor 3b, subunit 3, 130kd [Plasmodium knowlesi strain H]
gi|193811572|emb|CAQ42300.1| splicing factor 3b, subunit 3, 130kd, putative [Plasmodium knowlesi
strain H]
Length = 1276
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 124/284 (43%), Gaps = 32/284 (11%)
Query: 174 TWQLRL-AYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM 232
T LR+ Y + +L I P D+ F S N + N ++R +A+G+ + +
Sbjct: 983 TAALRVYTYDINYKLNLLHITPVEDQPFCFSPFNGRLLASVGN----KLRIYALGKKKLL 1038
Query: 233 -----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL 281
I+ + RI D R+ +L + Y + L I D R + +
Sbjct: 1039 KKCEYKDIPEAIISIKVSGDRIFASDIRESVLVFFYDANMNALRLISDDIIPRWITCSEI 1098
Query: 282 MDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPA 341
+D T + +D+ S+ VL R+ + A E N ++ GE+ K + +
Sbjct: 1099 LDHHTIMAADKFDSVFVL----RVPEEAKQEEYGISNKCWYGGEMMAGSNKNRRLEHI-M 1153
Query: 342 DDALGDCLASFE------SSQTTIIASTLLGSIVIFIPI-SSEEYELLEAVQARLAIHPL 394
+ +G+ + S + +S II ST++G+I FIP + EE EL + ++ + +
Sbjct: 1154 NFHVGEIVTSLQKVKLSPTSSECIIYSTIMGTIGAFIPYDNKEELELTQHLE--IILRTE 1211
Query: 395 TAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
PL G +H FRS +P V ++DGD+ QF L Q V
Sbjct: 1212 NPPLCGREHIFFRSYYHP--VQHVIDGDLCEQFSSLPYDIQRKV 1253
>gi|47087273|ref|NP_998668.1| splicing factor 3B subunit 3 [Danio rerio]
gi|28502779|gb|AAH47171.1| Splicing factor 3b, subunit 3 [Danio rerio]
Length = 1217
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 46/219 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ + + Y + +L D R + L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESLFWVRYRRNENQLIIFADDTYPRWITTACLLDYDTMASADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTPN---------------------CAYHMGEIAVSIRKGSFIYKLP 340
RL N S + + P YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTSDDVDEDPTGNKALWDRGLLNGASQKAEIIINYHIGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLL 399
+++ +TL G I I +P +S E+++ + ++ + + PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHLE--MHMRSEFPPLC 1156
Query: 400 GNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q++V
Sbjct: 1157 GRDHLSFRSYYFP--VKNVIDGDLCEQFNSMDPHKQKSV 1193
>gi|326676028|ref|XP_002667683.2| PREDICTED: splicing factor 3B subunit 3-like [Danio rerio]
gi|123888555|sp|Q1LVE8.1|SF3B3_DANRE RecName: Full=Splicing factor 3B subunit 3
Length = 1217
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 46/219 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ + + Y + +L D R + L+D DT +D+ G+I C
Sbjct: 999 RVIVSDVQESLFWVRYRRNENQLIIFADDTYPRWITTACLLDYDTMASADKFGNI----C 1054
Query: 302 SDRLEDNASPECNLTPN---------------------CAYHMGEIAVSIRKGSFIYKLP 340
RL N S + + P YH+GE +S++K + I
Sbjct: 1055 VVRLPPNTSDDVDEDPTGNKALWDRGLLNGASQKAEIIINYHIGETVLSLQKTTLI---- 1110
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLL 399
+++ +TL G I I +P +S E+++ + ++ + + PL
Sbjct: 1111 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHLE--MHMRSEFPPLC 1156
Query: 400 GNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ QF + +Q++V
Sbjct: 1157 GRDHLSFRSYYFP--VKNVIDGDLCEQFNSMDPHKQKSV 1193
>gi|303285956|ref|XP_003062268.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456679|gb|EEH53980.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1213
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 126/313 (40%), Gaps = 56/313 (17%)
Query: 151 SSSSLCSSPDDASCDG--IKLEE-TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNA 207
++ L +P D CDG + L E + L + T G+ A+C + R L GNA
Sbjct: 909 TAVGLTFAPRD--CDGGFVHLYRYLEDGTVTLVHKTPLDGVPGAMCGFKGRLLLG-CGNA 965
Query: 208 FYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFT--RIAVGDCRDGILFYSYHEDARKLE 265
+ F R V F + T H + RI VGD ++ F Y + L
Sbjct: 966 LRLYDFGKKKLLR----KVENRNFPNFITTVHASGDRIYVGDVQESFHFVKYKREDLSLI 1021
Query: 266 QIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPN------- 318
+ D R + + +D DT +D+ G++ V RL + S + P
Sbjct: 1022 IVADDVQPRHITAALPLDYDTMAGADKFGNVFVA----RLAQDVSADIEEDPTGGKASGG 1077
Query: 319 ------------CAYHMGEIAVSIRKGSFIYKLPADDALG-DCLASFESSQTTIIASTLL 365
+H+GE ++ KG+ A G +C+ + +TL+
Sbjct: 1078 TLNGAPRKVEHVAQFHVGETVCALTKGTL-------QAGGLECM----------LYATLM 1120
Query: 366 GSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLS 425
G++ +P +S ++ A + + PLLG DH +RS P V ++DGD+
Sbjct: 1121 GTVGALMPFTSRA-DVDFATHLEMHVRQENPPLLGRDHMAYRSAYFP--VKDVVDGDLCE 1177
Query: 426 QFLELTSTQQEAV 438
Q++ L + Q A+
Sbjct: 1178 QYVTLPAETQRAI 1190
>gi|169848339|ref|XP_001830877.1| pre-mRNA-splicing factor RSE1 [Coprinopsis cinerea okayama7#130]
gi|116508046|gb|EAU90941.1| pre-mRNA-splicing factor RSE1 [Coprinopsis cinerea okayama7#130]
Length = 1213
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 128/313 (40%), Gaps = 23/313 (7%)
Query: 133 SQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLAYSTTWPGMVLAI 192
S R +VG A + S C S K E T L L + T + +A+
Sbjct: 892 SARNGELHLVVGTAKDTTVSPRTCES---GFLRTYKFTENGTG-LELLHKTETDDVPMAL 947
Query: 193 CPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGI 252
+ R A G A + + + +R+ I+ LT +RI VGD ++ +
Sbjct: 948 LAFQGR-LAAGVGKALRI--YDIGKKKLLRKVENKSFTTAIVTLTTQGSRILVGDMQESV 1004
Query: 253 LFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPE 312
+ Y + +L D R V ++D +T V DR G+I V +RL+ S +
Sbjct: 1005 QYVVYKQPENRLLTFADDTQPRWVTAITMVDYNTIVAGDRFGNIFV----NRLDSKVSDQ 1060
Query: 313 CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFES------SQTTIIASTLLG 366
+ P A + E + + K+ A +GD + S + I+ + L G
Sbjct: 1061 VDEDPTGAGILHEKPI-LMGAPHKTKMIAHFHVGDIITSLHKVSLVAGGREVIVYTGLHG 1119
Query: 367 SIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLS 425
+I I +P IS E+ + + ++ + L+G D +R PV ++DGD+
Sbjct: 1120 TIGILMPFISKEDVDFISTLEQHMRTE--QPSLVGRDQLAYRGYYVPVKA--VVDGDLCE 1175
Query: 426 QFLELTSTQQEAV 438
+ L +++Q ++
Sbjct: 1176 TYAHLPASKQSSI 1188
>gi|310793065|gb|EFQ28526.1| CPSF A subunit region [Glomerella graminicola M1.001]
Length = 1212
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 99/225 (44%), Gaps = 12/225 (5%)
Query: 219 QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVAD 278
Q +R+ T +I+ L+ +RI VGD + GI + Y KL D R V
Sbjct: 971 QMLRKAQADVTPQLIVSLSTQGSRIIVGDVQHGITYVVYKPTTNKLIPFVDDTVSRWVTC 1030
Query: 279 CVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECN----LTPNCAYHMGEIAVSIRKGS 334
++D ++ D+ G++ ++ CS++ A E + H +S+ S
Sbjct: 1031 TTMVDYESVAGGDKFGNMFLVRCSEKATQEADDESGGLHLINTRDYLHGTPHRLSLLAHS 1090
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHP 393
+ +P + Q ++ S + G+I +FIP ++ E+ + + ++ +
Sbjct: 1091 YTQDVPTSITKTSLVVG---GQDVLLWSGINGTIGVFIPFVTREDVDFFQNLEQHMRTE- 1146
Query: 394 LTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
APL G DH +R P V ++DGD+ ++ L S +++ +
Sbjct: 1147 -DAPLAGRDHLMYRGYYVP--VKGVIDGDLCERYTLLPSEKKQMI 1188
>gi|116207186|ref|XP_001229402.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183483|gb|EAQ90951.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 1211
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 110/255 (43%), Gaps = 17/255 (6%)
Query: 190 LAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTR-FMIMLLTAHFTRIAVGDC 248
+A+ P+ R LA G V +++ R A G +I+ L +RI VGD
Sbjct: 944 MALIPFQGR-LLAGIGKTLRVYDL---GLRQLLRKAQGEVAPQLIVSLQTQGSRIIVGDV 999
Query: 249 RDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRL--- 305
+ GI + Y ++ KL D R ++D ++ D+ G+I +L CS+R
Sbjct: 1000 QQGITYVVYKPESNKLLPFADDTINRWTTCTTMVDYESVAGGDKFGNIWILRCSERASQE 1059
Query: 306 EDNASPECNLTPNCAY-HMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTL 364
D E L Y H + +S + LP + + Q ++ S +
Sbjct: 1060 SDEPGSEIQLLHARNYLHGAQSRLSAMAHFYTQDLPTSIVKTNLVV---GGQDVLVWSGI 1116
Query: 365 LGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDM 423
G++ + IP +S E+ + + +++ + PL G DH +R P V ++DGD+
Sbjct: 1117 QGTVGVLIPFVSREDVDFFQNLESHMRAE--DPPLAGRDHLIYRGYYVP--VKGVIDGDL 1172
Query: 424 LSQFLELTSTQQEAV 438
+F L + +++ +
Sbjct: 1173 CERFSLLPNDKKQMI 1187
>gi|66361481|ref|XP_627314.1| possible spliceosome factor [Cryptosporidium parvum Iowa II]
gi|46228697|gb|EAK89567.1| possible spliceosome factor [Cryptosporidium parvum Iowa II]
Length = 1317
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQR-LVADCVLMDVDTAVVSDRKGSIAVLS 300
RI GD +G+L + ++ + + + DP R L + C ++D T VSD+ +I V
Sbjct: 1099 RIFAGDISNGVLVFKFNNTSNQFILVAKDPMPRWLTSACEVLDYHTIAVSDKFDNIIVSR 1158
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTT-- 358
D+ S + T N + + + + A LGD + + SQ T
Sbjct: 1159 VPAEASDDFSFVTSFTDNNNSQSSALMRTHQINTV-----AQFHLGDIVTCLQKSQLTPT 1213
Query: 359 ----IIASTLLGSIVIFIPI-SSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPV 413
II T+LGSI PI ++E+ ELL ++ + + + LL DH FRS +P
Sbjct: 1214 SAEAIIYGTVLGSIGSLSPILNNEDIELLSKLE--ILLRKQKSTLLSRDHLMFRSYYSP- 1270
Query: 414 GVPKILDGDMLSQFLELTSTQQEAVLS 440
V ++DGD F L S Q + S
Sbjct: 1271 -VHNVIDGDFCQTFTILDSQIQSEIAS 1296
>gi|124806507|ref|XP_001350742.1| splicing factor 3b, subunit 3, 130kD, putative [Plasmodium falciparum
3D7]
gi|23496869|gb|AAN36422.1|AE014849_41 splicing factor 3b, subunit 3, 130kD, putative [Plasmodium falciparum
3D7]
Length = 1329
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
RI D R+ +L + Y + L I D R + ++D T + +D+ S+ +L
Sbjct: 1111 NRIFACDIRESVLIFFYDPNQNTLRLISDDIIPRWITCSEILDHHTIMAADKFDSVFILR 1170
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE------S 354
E+ E +T C Y GEI S K + + + +G+ + S + +
Sbjct: 1171 VP---EEAKQDEYGITNKCWYG-GEIMNSSTKNRKLEHMMSF-HIGEIVTSMQKVRLSPT 1225
Query: 355 SQTTIIASTLLGSIVIFIPI-SSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPV 413
S II ST++G+I FIP + EE EL + ++ + + PL G +H FRS +P
Sbjct: 1226 SSECIIYSTIMGTIGAFIPYDNKEELELTQHLE--IILRTEKPPLCGREHIFFRSYYHP- 1282
Query: 414 GVPKILDGDMLSQFLELTSTQQEAV 438
V ++DGD+ QF L+ Q+ +
Sbjct: 1283 -VQNVVDGDLCEQFSSLSYDAQKKI 1306
>gi|339259094|ref|XP_003369733.1| splicing factor 3B subunit 3 [Trichinella spiralis]
gi|316965959|gb|EFV50595.1| splicing factor 3B subunit 3 [Trichinella spiralis]
Length = 1241
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 116/273 (42%), Gaps = 35/273 (12%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
+L + + TT V A+ + R LASAG + + + +R+ +I
Sbjct: 970 RLEMMHRTTVDEAVTALASFRGR-LLASAGKMLRI--YDLGKKKLLRKCENKHMPNLITH 1026
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVV---SD- 291
+ RI VGD ++ + FY Y +L D QR + ++D DT + SD
Sbjct: 1027 ILTMGHRIFVGDVQESVFFYRYKPIENQLVVFADDTHQRFCSAMCILDYDTVALRLPSDC 1086
Query: 292 ----RKGSIAVLSCSDR-LEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALG 346
++ + + D+ + + AS +C + +++GE ++K I
Sbjct: 1087 TDDVQEDPTGIRALWDKGILNGASQKCEMV--ATFYVGECVTCLQKAMLI---------- 1134
Query: 347 DCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSE 405
S +++ ST+ G I +P SS E+YE + ++ L PL G DH
Sbjct: 1135 ------PGSSESLVYSTMSGMIGALVPFSSKEDYEFFQHLEMHLRTE--YPPLCGRDHLA 1186
Query: 406 FRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+RS P V ++DGD+ Q+ L +Q+ +
Sbjct: 1187 YRSFYAP--VKGVIDGDLCEQYCLLEYGKQKEI 1217
>gi|241952575|ref|XP_002419009.1| pre-mRNA-splicing factor, putative; pre-spliceosome component,
putative [Candida dubliniensis CD36]
gi|223642349|emb|CAX42591.1| pre-mRNA-splicing factor, putative [Candida dubliniensis CD36]
Length = 1187
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 241 TRIAVGDC-RDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL 299
RI + D + I+F + + + D +R + + +D+DT + D+ G+I V
Sbjct: 969 NRIIICDSHKSSIIFAKFDDSQNQFVPFADDIMKRQITSIMNLDIDTLIGGDKFGNIFVT 1028
Query: 300 SCSDRLEDNASPECNLTP-------NCAY--------HMGEIAVSIRKGSFIYKLPADDA 344
+ + A + + +C Y H+G+I S+ G
Sbjct: 1029 RIDEDISKQADDDWTILKSQEGILNSCPYKLQNLIEFHIGDIITSLNLGCL--------- 1079
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDH 403
LA ES +I + L G+I + +P +S E ELL +Q L + L+G DH
Sbjct: 1080 ---NLAGTES----VIYTGLQGTIGLLVPLVSKSEVELLFNLQ--LLMQQFQNNLVGKDH 1130
Query: 404 SEFRSRENPVGVPKILDGDMLSQFLELTST 433
+FRS NP + ++DGD+L +FLE ++
Sbjct: 1131 LKFRSYYNP--IKNVIDGDLLERFLEFDTS 1158
>gi|448528339|ref|XP_003869702.1| hypothetical protein CORT_0D07360 [Candida orthopsilosis Co 90-125]
gi|380354055|emb|CCG23569.1| hypothetical protein CORT_0D07360 [Candida orthopsilosis]
Length = 1170
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 112/260 (43%), Gaps = 48/260 (18%)
Query: 195 YLDRYFLASAGN-AFYVCGFPNDNPQRVRRFAVGRTRFM--IMLLTAH-FTRIAVGDCRD 250
+ DR +AS + + Y G +++ R ++ R F+ I+ +T RI + D +
Sbjct: 903 FQDRLLVASGNSISLYELG-----QRQLLRKSLTRIDFIQTIVKVTPQPRDRILLADSAN 957
Query: 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNA- 309
I+F + ++ + + D +R + +D DT + D+ G+I V S DR E
Sbjct: 958 SIVFAKFDQEENQFVSMADDTVKRNITAWKQLDYDTVIGGDKFGNIFV-SRLDREESKQI 1016
Query: 310 -------------SPECN-----LTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLAS 351
SP N L C Y++ +I S + GSF LG
Sbjct: 1017 DQNWTVLKQAAKNSPNLNSCVYKLQNLCEYYIPDIITSFQLGSF--------NLG----- 1063
Query: 352 FESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRE 410
+ II + L G+I I +P IS E ELL +Q ++ + + G +H++ RS
Sbjct: 1064 ---GEECIIYTGLTGTIGILLPLISKSEIELLHDLQLEISAYNDKVNVAGKNHAKLRSYY 1120
Query: 411 NPVGVPKILDGDMLSQFLEL 430
NP I DGD L +L L
Sbjct: 1121 NP--AKNIFDGDFLELYLNL 1138
>gi|67600754|ref|XP_666354.1| CG13900 gene product [Cryptosporidium hominis TU502]
gi|54657334|gb|EAL36124.1| CG13900 gene product [Cryptosporidium hominis]
Length = 1318
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQR-LVADCVLMDVDTAVVSDRKGSIAVLS 300
RI GD +G+L + ++ + + + DP R L + C ++D T VSD+ +I V
Sbjct: 1100 RIFAGDISNGVLVFKFNNTSNQFILVAKDPMPRWLTSACEVLDYHTIAVSDKFDNIIVSR 1159
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTT-- 358
D+ S + T N + + + + A LGD + + SQ T
Sbjct: 1160 VPVEASDDFSFVTSFTDNNNSQSSALMRTHQINTV-----AQFHLGDIVTCLQKSQLTPT 1214
Query: 359 ----IIASTLLGSIVIFIPI-SSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPV 413
II T+LGSI PI ++E+ ELL ++ + + + LL DH FRS +P
Sbjct: 1215 SAEAIIYGTVLGSIGSLSPILNNEDIELLSKLE--ILLRKQKSTLLSRDHLMFRSYYSP- 1271
Query: 414 GVPKILDGDMLSQFLELTSTQQEAVLS 440
V ++DGD F L S Q + S
Sbjct: 1272 -VHNVIDGDFCQTFTILDSKIQSEIAS 1297
>gi|320581947|gb|EFW96166.1| hypothetical protein HPODL_2449 [Ogataea parapolymorpha DL-1]
Length = 1203
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 219 QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVAD 278
Q V+R + + I+ L R+ V D RD + + Y D QR V
Sbjct: 969 QLVKRSSTRLECYEIVDLKTQGFRVIVSDVRDSVRYTVYKPLENSFVDFIDDTMQRHVTR 1028
Query: 279 CVLMDVDTAVVSDRKGSIAVLSCSDRL-----EDNAS-----PECNLTPNCAYHMGEIAV 328
+L+D DT VV D+ G+I+VL C +++ EDN L Y++G++
Sbjct: 1029 TLLLDYDTVVVGDKFGNISVLRCPEQISEMSDEDNHGFLVKMRRTKLDNPVNYYVGDMPT 1088
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
+KGS + ES II L G + P+ S E + +Q
Sbjct: 1089 FFQKGSL------------TIGGAES----IIYGCLQGQMGCLYPMKSLSEINFFKELQ- 1131
Query: 388 RLAIHPLTAPLLGNDHSEFRSRENPVGVPK-ILDGDMLSQFLEL 430
RL IH T+ L ++ +F+ NP PK +DGD++ ++ L
Sbjct: 1132 RLIIHEFTS-LTDREYLKFKGYYNP---PKNSIDGDLIEEYYRL 1171
>gi|46125735|ref|XP_387421.1| hypothetical protein FG07245.1 [Gibberella zeae PH-1]
Length = 1208
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 96/224 (42%), Gaps = 38/224 (16%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI VGD + G+ + Y + KL D R ++D ++ D+
Sbjct: 985 IVSLNTQGSRIIVGDVQQGVTYVVYKPASNKLIPFVDDTIARWTTCTTMVDYESVAGGDK 1044
Query: 293 KGSIAVLSCSDRLEDNASPE------------CNLTPN-----CAYHMGEIAVSIRKGSF 335
G++ ++ C ++ + A E + TP+ C ++ +I SI K S
Sbjct: 1045 FGNMFIVRCPEKASEEADEEQSGLHLINARDYLHGTPHRVSLMCHFYTQDIPTSITKASL 1104
Query: 336 IYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPL 394
+ Q ++ S ++G+I +FIP +S E+ + + ++ L
Sbjct: 1105 VV----------------GGQEVLLWSGIMGTIGVFIPFVSREDADFFQNLEQHLRTE-- 1146
Query: 395 TAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
PL G DH +R P V ++DGD+ ++ L + +++ +
Sbjct: 1147 DPPLAGRDHLMYRGYYAP--VKGVIDGDLCERYNLLPNDKKQMI 1188
>gi|408400551|gb|EKJ79630.1| hypothetical protein FPSE_00190 [Fusarium pseudograminearum CS3096]
Length = 1212
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 96/224 (42%), Gaps = 38/224 (16%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI VGD + G+ + Y + KL D R ++D ++ D+
Sbjct: 985 IVSLNTQGSRIIVGDVQQGVTYVVYKPASNKLIPFVDDTIARWTTCTTMVDYESVAGGDK 1044
Query: 293 KGSIAVLSCSDRLEDNASPE------------CNLTPN-----CAYHMGEIAVSIRKGSF 335
G++ ++ C ++ + A E + TP+ C ++ +I SI K S
Sbjct: 1045 FGNMFIVRCPEKASEEADEEQSGLHLINARDYLHGTPHRVSLMCHFYTQDIPTSITKASL 1104
Query: 336 IYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPL 394
+ Q ++ S ++G+I +FIP +S E+ + + ++ L
Sbjct: 1105 VV----------------GGQEVLLWSGIMGTIGVFIPFVSREDADFFQNLEQHLRTE-- 1146
Query: 395 TAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
PL G DH +R P V ++DGD+ ++ L + +++ +
Sbjct: 1147 DPPLAGRDHLMYRGYYAP--VKGVIDGDLCERYNLLPNDKKQMI 1188
>gi|255588145|ref|XP_002534515.1| spliceosomal protein sap, putative [Ricinus communis]
gi|223525135|gb|EEF27867.1| spliceosomal protein sap, putative [Ricinus communis]
Length = 1214
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 119/292 (40%), Gaps = 65/292 (22%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+ + R LA G +R + +G+ R +
Sbjct: 935 LELLHKTQVEGVPLALSQFQGR-LLAGIGPV-------------LRLYDLGKKRLLRKCE 980
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ F Y D +L D R + +D D
Sbjct: 981 NKLFPNSIVSIQTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDCVPRWLTASHHVDFD 1040
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G+I + SD +E++ + + N PN +H+G++
Sbjct: 1041 TMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHIGDVVT 1100
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
S+ K S I P G+C II T++GS+ +P +S ++ + ++
Sbjct: 1101 SLSKASLI---PGG---GEC----------IIYGTVMGSVGALLPFTSRDDVDFFSHLEM 1144
Query: 388 RL-AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
L HP PL G DH +RS P V ++DGD+ QF L Q +
Sbjct: 1145 HLRQDHP---PLCGRDHMAYRSAYFP--VKDVIDGDLCEQFPTLPLDAQRKI 1191
>gi|393217872|gb|EJD03361.1| hypothetical protein FOMMEDRAFT_108572 [Fomitiporia mediterranea
MF3/22]
Length = 1213
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 108/254 (42%), Gaps = 59/254 (23%)
Query: 219 QRVRRFAVGRTRFM-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQI 267
+ +R + +G+ + + I+ L +RI VGD ++ I++ + +L I
Sbjct: 960 KSLRIYEIGKKKLLRKVETKTYGSAIVTLNTQGSRIIVGDMQESIVYAVFKPPENRL-LI 1018
Query: 268 YCDPSQ-RLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCA------ 320
+ D SQ R V++D T D+ G++ + +RL+ S + + P A
Sbjct: 1019 FADDSQPRWTTSAVMVDYTTIAAGDKFGNVFI----NRLDSKISDQVDEDPTGAGILHEK 1074
Query: 321 ---------------YHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLL 365
+H+G+I SI K S + + ++ + L
Sbjct: 1075 GLLMGAPHKTGMIAHFHVGDIVTSIHKISLV----------------AGGREVLLYTCLH 1118
Query: 366 GSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDML 424
G+I I +P +S E+ + + ++ + L+ L+G DH +R PV ++DGD+
Sbjct: 1119 GTIGILVPFVSKEDVDFISTLEQHMRSEKLS--LVGRDHLAWRGYYVPVKA--VVDGDLC 1174
Query: 425 SQFLELTSTQQEAV 438
QF L + +Q A+
Sbjct: 1175 EQFARLPANKQSAI 1188
>gi|348667612|gb|EGZ07437.1| hypothetical protein PHYSODRAFT_565381 [Phytophthora sojae]
Length = 1197
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 113/288 (39%), Gaps = 48/288 (16%)
Query: 172 TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRF 231
E QL L ++T + A+C + R L S G A + +++ R R
Sbjct: 914 VEGMQLVLVHTTEIDDIPHAMCEFQGR-LLVSVGRALRIYDL---GKKKMLRKCENRNFP 969
Query: 232 MIML-LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
I++ L A RI D + F Y +D +L D R + VL+D DT +
Sbjct: 970 SILVELKAAGDRIYASDMHESFHFVKYKKDENQLVIFADDCVPRFITSSVLLDYDTLCGA 1029
Query: 291 DRKGSIAVLSCSDRLEDNA-SPECNL----------TPN-----CAYHMGEIAVSIRKGS 334
D+ G++ V + D +P N PN +H+G++ S+ + S
Sbjct: 1030 DKFGNVFVSRLPSEVSDEIDNPTANRILWDSGLLNGAPNKLEQVAQFHVGDVVTSMVRTS 1089
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE----YELLEAVQARLA 390
+ II +T++G I IP +S + Y LE +
Sbjct: 1090 LV----------------PGGIEAIIYATIMGRIGALIPFTSRQDVDFYTHLE-----MY 1128
Query: 391 IHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ PL G DH +RS PV + DGD+ QF L+ +Q +V
Sbjct: 1129 MRQEQPPLCGRDHLSYRSYYIPV--KNVTDGDLCEQFSSLSVEKQASV 1174
>gi|336371417|gb|EGN99756.1| hypothetical protein SERLA73DRAFT_88390 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384183|gb|EGO25331.1| hypothetical protein SERLADRAFT_355643 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1216
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 126/314 (40%), Gaps = 22/314 (7%)
Query: 133 SQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLAYSTTWPGMVLAI 192
S R + +VG A + + CSS K E T L L + T + LA+
Sbjct: 892 SARGNELHLVVGTAADTFLAPRSCSS---GFLRTYKFTEDGT-GLELLHKTETDDVPLAL 947
Query: 193 CPYLDRYFLASAGNAFYVCGFPNDNP-QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDG 251
+ R +A G A + ++V A I+ L +RI VGD ++
Sbjct: 948 MAFQGR-LVAGVGKALRIYDIGKKKLLRKVENKARATFSTAIVTLNTQGSRIIVGDMQES 1006
Query: 252 ILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASP 311
I F +Y +L D R + ++D T DR G+I V +RL+ S
Sbjct: 1007 ISFVAYKAPENRLLVFADDNQPRWITATTMVDYTTIAAGDRFGNIFV----NRLDPKVSE 1062
Query: 312 ECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFES------SQTTIIASTLL 365
+ + P A + E + + K+ A +GD + S + ++ + L
Sbjct: 1063 QVDDDPTGAGILHEKGL-LMGAPHKTKMLAHFHIGDLVTSINKVSLVAGGREVLLYTGLH 1121
Query: 366 GSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDML 424
G+I I +P +S E+ + + ++ + L+G D +R P V ++DGD+
Sbjct: 1122 GTIGILVPFVSKEDVDFISTLEQHMRTE--QGSLVGRDQLSWRGYYTP--VKSVVDGDLC 1177
Query: 425 SQFLELTSTQQEAV 438
+ L T+Q A+
Sbjct: 1178 ETYARLPGTKQSAI 1191
>gi|255081708|ref|XP_002508076.1| predicted protein [Micromonas sp. RCC299]
gi|226523352|gb|ACO69334.1| predicted protein [Micromonas sp. RCC299]
Length = 1199
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 120/296 (40%), Gaps = 20/296 (6%)
Query: 151 SSSSLCSSPDDASCDGIKLEE-TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFY 209
S+ SL SP D+ I L T+ + L + T G+ A+C + R L GN
Sbjct: 893 SAVSLTFSPRDSEGGFIHLYRYTQDGGIELFHKTPLDGVPGAMCGFKGR-LLVGVGNTLR 951
Query: 210 VCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYC 269
+ F + +R+ I + A RI VGD ++ + Y + + +
Sbjct: 952 LYDF--GKKKLLRKVENRNFPNFIKTIHAQGERIYVGDVQESFHYVRYKREDGSMYIVAD 1009
Query: 270 DPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTP---NCAYHMGEI 326
D R V +D DT DR G++ V RL + S E P AY G +
Sbjct: 1010 DVQPRHVTAACPLDYDTIAGGDRFGNVFV----SRLAQDVSDEIEEDPTGGKTAYGQGAL 1065
Query: 327 AVSIRKGSFIYKLPADDALGDCLASFESSQT----TIIASTLLGSIVIFIPISSEEYELL 382
+ K + + + + + C + + Q ++I +TL+G++ +P + E ++
Sbjct: 1066 NGASHKINQVTQFHVGETV--CALTKGTLQAGGLESMIYATLMGTLGALMPFGNRE-DVD 1122
Query: 383 EAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ + PLLG DH FRS P V ++DGD+ + L Q V
Sbjct: 1123 FCTHLEMHMRQELPPLLGRDHLAFRSSYFP--VKDVIDGDLCEMYTVLPHEAQRRV 1176
>gi|302831461|ref|XP_002947296.1| hypothetical protein VOLCADRAFT_73165 [Volvox carteri f. nagariensis]
gi|300267703|gb|EFJ51886.1| hypothetical protein VOLCADRAFT_73165 [Volvox carteri f. nagariensis]
Length = 1221
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 116/283 (40%), Gaps = 44/283 (15%)
Query: 176 QLRLAYSTTWPGMVL-AICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIM 234
+L L + T G V A+C + R LA G + + + +R+ R IM
Sbjct: 940 RLELVHKTIVDGGVPGALCGFKGR-LLAGVGPTLRL--YDMGKKKLLRKCEYNRLPHQIM 996
Query: 235 LLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKG 294
+T RI VGD ++ + Y + D + R + + +D DT D+ G
Sbjct: 997 NITVQGPRIYVGDAQESVHMMRYKKADNAFYIFADDIAPRYLTTILPLDYDTLAAGDKFG 1056
Query: 295 SIAVL----SCSDRLEDN--------ASPECNLTPN-----CAYHMGEIAVSIRKGSFIY 337
+ VL S ++ED+ AS N P+ +H+G+ S+++
Sbjct: 1057 NFVVLRLPREASQQVEDDPTGGKMAAASGRLNGAPHKLEEVVKFHVGDTITSLQRAEMQ- 1115
Query: 338 KLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLT 395
Q ++ ST++G+I + P ++ E+ + ++ L HP
Sbjct: 1116 ---------------AGGQEVLLYSTVMGAIGVLYPFTNREDVDFFGHLEMHLRQEHP-- 1158
Query: 396 APLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
PL G DH FRS P V +DGD+ Q+ + + +Q+ +
Sbjct: 1159 -PLCGRDHLSFRSAYFP--VRSCVDGDLCGQYASIPAKKQQMI 1198
>gi|390601867|gb|EIN11260.1| hypothetical protein PUNSTDRAFT_118747 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1214
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 94/228 (41%), Gaps = 44/228 (19%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI VGD ++ + + Y +L D R ++ ++D +T + DR
Sbjct: 984 IVTLATQGSRILVGDMQESMAYAVYKPPENRLLVFADDVQPRWISSSTMVDYNTVIAGDR 1043
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPN---------------------CAYHMGEIAVSIR 331
G++ V +RL+ S + + P C YH+G+I S+
Sbjct: 1044 FGNVFV----NRLDAKVSEQVDDDPTGAGILHEKGLLMGAPHKTKMLCHYHVGDIVTSLS 1099
Query: 332 KGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLA 390
K +A + I+ + L G+I + +P +S E+ + + ++ +
Sbjct: 1100 K----------------VALVPGGREVILYTGLHGTIGVLVPFVSKEDVDFISTLEQHMR 1143
Query: 391 IHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
L+G DH +R PV ++DGD+ F L + +Q ++
Sbjct: 1144 TELTQFGLVGRDHLSWRGYYVPVKA--VVDGDLCEAFATLPAPKQSSI 1189
>gi|390357128|ref|XP_001198237.2| PREDICTED: splicing factor 3B subunit 3-like [Strongylocentrotus
purpuratus]
Length = 949
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 105/228 (46%), Gaps = 43/228 (18%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
F+ +LT R+ + D ++ + F Y ++ D + R + L+D DT + +
Sbjct: 721 FITNILTTG-NRVIISDVQESLHFLKYKRQENQMVIFADDSNPRWITATCLLDHDTVMCA 779
Query: 291 DRKGSIAVL----SCSDRLEDN---------------ASPECNLTPNCAYHMGEIAVSIR 331
D+ G+I VL S +D L+++ AS + ++ ++ +GE +S++
Sbjct: 780 DKFGNITVLRLPTSVNDNLDEDPTGVKALWDRGLLNGASQKTDVV--SSFFIGETVLSLQ 837
Query: 332 KGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLA 390
K + I +++ +TL G+I + +P ++ E+++ + ++ +
Sbjct: 838 KATLI----------------PGGSESVVYTTLSGAIGVLVPFTAHEDHDFFQHLE--MH 879
Query: 391 IHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ APL G DH +RS P V ++DGD+ Q+ + ++Q V
Sbjct: 880 MRSEYAPLCGRDHLSYRSYYYP--VKNVIDGDLCEQYNSMELSKQRTV 925
>gi|409045147|gb|EKM54628.1| hypothetical protein PHACADRAFT_210427 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1213
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 48/229 (20%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQ-RLVADCVLMDVDTAVVSD 291
I+ L +RI VGD ++ I + Y +L I+ D +Q R + ++D +T D
Sbjct: 985 IVTLNTQGSRIIVGDMQESIFYAVYKPPENRL-LIFADDAQPRWITAVTMIDYNTVAAGD 1043
Query: 292 RKGSIAVLSCSDRLEDNASPECNLTPNCA---------------------YHMGEIAVSI 330
R G++ V +RL+ S + + P A +H+G+I SI
Sbjct: 1044 RFGNVFV----NRLDPKISDQVDDDPTGAGILHEKGILMGAPHKTAMIAHFHVGDIVTSI 1099
Query: 331 RKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARL 389
K S + + ++ + L G++ I +P +S E+ + + ++ +
Sbjct: 1100 HKVSLV----------------AGGRELLLYTGLHGTVGILVPFVSKEDVDFISTLEQHM 1143
Query: 390 AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
L+ L+G DH +R PV ++DGD+ F L +++Q ++
Sbjct: 1144 RTEQLS--LVGRDHLAWRGYYVPVKA--VVDGDLCEMFARLPASKQSSI 1188
>gi|85682925|gb|ABC73438.1| CG13900 [Drosophila miranda]
Length = 341
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 98/236 (41%), Gaps = 39/236 (16%)
Query: 191 AICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRD 250
A+C + R LA G + + + +R+ + I+ + A R+ V D ++
Sbjct: 127 ALCGFQGR-LLAGCGRMLRI--YDLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQE 183
Query: 251 GILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNAS 310
+ F Y +L D R V L+D DT ++D+ G++++ + D+
Sbjct: 184 SVFFLRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVD 243
Query: 311 PECNLTPN-----------------CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
+ T + C++H+GEI +S++K + I
Sbjct: 244 EDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI----------------P 287
Query: 354 SSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRS 408
+I STL G++ F+P +S E+Y+ + ++ + + PL G DH +RS
Sbjct: 288 GGSEALIYSTLNGTVGAFVPFTSREDYDFFQHLE--MHMRNENPPLCGRDHLSYRS 341
>gi|296086939|emb|CBI33172.3| unnamed protein product [Vitis vinifera]
Length = 934
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 117/281 (41%), Gaps = 65/281 (23%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+C + R LA G+ +R + +G+ R +
Sbjct: 655 LELLHKTQVEGVPLALCQFQGR-LLAGIGSV-------------LRLYDLGKRRLLRKCE 700
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ + Y D +L D R + +D D
Sbjct: 701 NKLFPNTIVSIHTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYHIDFD 760
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G+I + SD +E++ + + N PN +H+G++
Sbjct: 761 TMAGADKFGNIYFVRLPQDVSDEVEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVT 820
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
++K S I P G+C II T++GS+ + +S ++ + ++
Sbjct: 821 CLQKASLI---PGG---GEC----------IIYGTVMGSLGALLAFTSRDDVDFFSHLEM 864
Query: 388 RL-AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQF 427
+ HP PL G DH +RS P V ++DGD+ QF
Sbjct: 865 HMRQEHP---PLCGRDHMAYRSAYFP--VKDVIDGDLCEQF 900
>gi|225448823|ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like [Vitis vinifera]
Length = 1214
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 117/281 (41%), Gaps = 65/281 (23%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+C + R LA G+ +R + +G+ R +
Sbjct: 935 LELLHKTQVEGVPLALCQFQGR-LLAGIGSV-------------LRLYDLGKRRLLRKCE 980
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ + Y D +L D R + +D D
Sbjct: 981 NKLFPNTIVSIHTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYHIDFD 1040
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G+I + SD +E++ + + N PN +H+G++
Sbjct: 1041 TMAGADKFGNIYFVRLPQDVSDEVEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVT 1100
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
++K S I P G+C II T++GS+ + +S ++ + ++
Sbjct: 1101 CLQKASLI---PGG---GEC----------IIYGTVMGSLGALLAFTSRDDVDFFSHLEM 1144
Query: 388 RL-AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQF 427
+ HP PL G DH +RS P V ++DGD+ QF
Sbjct: 1145 HMRQEHP---PLCGRDHMAYRSAYFP--VKDVIDGDLCEQF 1180
>gi|323454388|gb|EGB10258.1| hypothetical protein AURANDRAFT_23619 [Aureococcus anophagefferens]
Length = 1212
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 33/211 (15%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL-- 299
RI V D + Y D +L DP R V +D DT V+D+ G++AVL
Sbjct: 998 RIFVADAAMSVHLARYVRDRNRLAVFADDPVGRCVTAFAPLDYDTVAVADKFGNVAVLRL 1057
Query: 300 --SCSDRLED----------NASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGD 347
CSD ++D N LT YH+G++ ++RK + + A A G
Sbjct: 1058 GPECSDDVDDAAGDAWDNGRNGGAPNKLTQLAHYHVGDVVTALRKATLV----AGGAEG- 1112
Query: 348 CLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFR 407
I+ +T+ G + +P +S E A + + AP+ G DH +R
Sbjct: 1113 -----------IVYATVSGGVGALVPSASREDRDFFA-HLEMHMRQELAPVTGRDHVSYR 1160
Query: 408 SRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
S P V + DGD+ ++F L Q+ V
Sbjct: 1161 SYYLP--VKDVADGDLCAEFARLPFDAQKRV 1189
>gi|407919154|gb|EKG12409.1| Cleavage/polyadenylation specificity factor A subunit [Macrophomina
phaseolina MS6]
Length = 1210
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 40/226 (17%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLM-DVDTAVVS 290
+++ L +RI D ++ + + Y +L Q +CD S C M D +T
Sbjct: 982 ILIGLQTQGSRIVCSDVQESVTYVVYKHLENRLIQ-FCDDSIHRWTSCTAMVDYETTAGG 1040
Query: 291 DRKGSIAVLSCSDRLED------------NASPECNLTPN-----CAYHMGEIAVSIRKG 333
D+ G+I ++ C + + N P TPN ++ +I SI+K
Sbjct: 1041 DKFGNIWLVRCPPKASEEADEEGSGLHLINERPYLQGTPNRLDLLAHFYTQDIPTSIQKT 1100
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIH 392
+ + + ++ S L G++ IFIP +S E+ + ++++ +L
Sbjct: 1101 ALV----------------AGGRELLLWSGLQGTLGIFIPFVSREDVDFFQSLEQQLRTE 1144
Query: 393 PLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
P+ G DH +RS PV ++DGD+ +FL L ++E +
Sbjct: 1145 --DPPIAGRDHLAYRSYYVPV--KGVIDGDLCERFLRLPRDKKETI 1186
>gi|378730761|gb|EHY57220.1| pre-mRNA-splicing factor rse1, variant [Exophiala dermatitidis
NIH/UT8656]
Length = 914
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 36/222 (16%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI V D ++ + + Y KL D R C ++D +T D
Sbjct: 684 LIVGLQTQGSRIIVSDIQESVTYCVYKFQENKLIPFCDDVIARWTTCCTMVDYETVAGGD 743
Query: 292 RKGSIAVLSCSDRLEDNASPE------------CNLTPN-----CAYHMGEIAVSIRKGS 334
+ G++ +L C ++ + A + N TPN Y G+I SI+K +
Sbjct: 744 KFGNLWMLRCPQKVSEEADEDNSGVHLLHERGYLNGTPNRLSLMIHYFPGDIPTSIQKTN 803
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHP 393
+ + + + G++ I +P +S E+ + ++++ +LA
Sbjct: 804 LV----------------AGGRDVVFWTGFQGTLGILVPFVSREDVDFFQSLEMQLASSN 847
Query: 394 LTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQ 435
PLLG DH +RS P ++DGD+ F L + ++
Sbjct: 848 GNPPLLGRDHLIYRSYYAP--SKGVIDGDLCETFFLLPNDKK 887
>gi|145348011|ref|XP_001418451.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578680|gb|ABO96744.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1196
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 111/273 (40%), Gaps = 27/273 (9%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLL 236
L L +ST G V A+C Y + LA N+ + + + +R+ I L
Sbjct: 917 LNLVHSTPTDGPVGALCGY-KGHLLAGVNNSLRIYDY--GKKKLLRKVENRNFPNFITTL 973
Query: 237 TAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI 296
A RI VGD ++ I + Y D + D R + + +D DT +D+ G+I
Sbjct: 974 HAAGDRIYVGDVQESIHYVKYKADEGSIYIFADDTKPRYITATLPLDYDTLAGADKFGNI 1033
Query: 297 AVLSCSDRLEDNASPECNLTPNCA---YHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
V +RL + S + + P Y G + + K + A +G+ + +
Sbjct: 1034 FV----NRLPKDVSEDMDDDPTGGKNIYSQGVLNGAPNKS----ETSAQTYIGETVCALT 1085
Query: 354 SSQ------TTIIASTLLGSIVIFIPISSE-EYELLEAVQARLAIHPLTAP-LLGNDHSE 405
I+ T +G I +P SS E E ++ + AP ++G DH
Sbjct: 1086 KGALQPGGIEIIMYGTFMGGIGCLLPFSSRSEIEFFTHLEMHMRQE---APSIVGRDHMA 1142
Query: 406 FRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
FRS P V ++DGD+ QF L + Q +
Sbjct: 1143 FRSYYAP--VKNVIDGDLCEQFGALPADVQRRI 1173
>gi|170083859|ref|XP_001873153.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650705|gb|EDR14945.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1213
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 132/314 (42%), Gaps = 25/314 (7%)
Query: 133 SQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLAYSTTWPGMVLAI 192
S R +VG A + + S C+S K E L + T + LA+
Sbjct: 892 SARNGELHLVVGTAADTIVSPRSCTS---GYLRTYKFT-NEGAGLEFQHKTEVDDVPLAL 947
Query: 193 CPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGI 252
+ R +A G A + + + +R+ I+ L+ +RI VGD ++ I
Sbjct: 948 LAFQGR-LVAGVGKALRI--YDIGKKKLLRKVENKTFSSAIVTLSTQGSRIIVGDMQESI 1004
Query: 253 LFYSYHEDARKLEQIYCDPSQ-RLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASP 311
F Y +L ++ D SQ R + ++D +T V DR G+I V +RL+ S
Sbjct: 1005 QFAVYKPPENRL-LVFADDSQPRWITASSMVDYNTIVAGDRFGNIFV----NRLDPKVSE 1059
Query: 312 ECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFES------SQTTIIASTLL 365
+ + P A + E + + K+ A LGD + S + ++ + L
Sbjct: 1060 QVDDDPTGAGILHEKGI-LMGAPHKTKMLAHFHLGDLVTSIHKVSLVAGGREVLMYTGLH 1118
Query: 366 GSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDML 424
G+I I +P +S E+ + + ++ + + L+G D +R PV ++DGD+
Sbjct: 1119 GTIGILVPFVSKEDVDFISTLEQHMRTE--QSSLVGRDQLSWRGYYAPVKA--VVDGDLC 1174
Query: 425 SQFLELTSTQQEAV 438
+ L + +Q ++
Sbjct: 1175 ETYARLPAAKQSSI 1188
>gi|443896643|dbj|GAC73987.1| predicted DNA methylase [Pseudozyma antarctica T-34]
Length = 1285
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L A +RI VGD ++ ++F SY +L D R V C ++D DT +D+
Sbjct: 1057 IVALDAQGSRIVVGDMQESVIFASYKPLENRLVTFADDIMPRYVTRCTMLDYDTVAAADK 1116
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASF 352
G++ V+ R++ + S + M E + + + L A +GD + S
Sbjct: 1117 FGNVYVV----RIDADTSRSVDEDVTGMTTMHEKPL-LMGAAHKATLLAHYFVGDIITSL 1171
Query: 353 ESS------QTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSE 405
+ + ++ + + G+I +P +S E+ + + ++ +L + L+G DH
Sbjct: 1172 SRAVMVPGGREVLLYTGISGTIGALVPFVSKEDVDTMTTLEMQLRQQ--SDSLVGRDHLA 1229
Query: 406 FRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+RS P V ++DGD+ F L +Q AV
Sbjct: 1230 YRSSYAP--VKHVIDGDLCESFGLLPPAKQSAV 1260
>gi|412992547|emb|CCO18527.1| predicted protein [Bathycoccus prasinos]
Length = 1275
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 94/456 (20%), Positives = 185/456 (40%), Gaps = 52/456 (11%)
Query: 5 KRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSD---ICCVDPLSGSVLSSFK 61
++L++R L P+++ + E++ L V+ + ++ + + D + L+ +
Sbjct: 852 QKLHIRTVPLREQPRRIAHQPETKTLAVLTMKESDVPGQEEEFFVRLFDNKTFETLAKYP 911
Query: 62 LELGETGKSMELVRV-GHEQV-LVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSD 119
LE E S+ G + + VVGT+ + P E ES++GR++V + + +S
Sbjct: 912 LEPNENDASIISCSFDGDDDIYFVVGTAFAD-----PHSEPESSRGRILVFKVSNTSSSG 966
Query: 120 CGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRL 179
G+ + ++ SSS+ C+ +ET L
Sbjct: 967 GGNAVVNGNDHGDGRASA--------------SSSVLQKSLTLVCE----KETRGAVYNL 1008
Query: 180 AYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAH 239
+ G +LA L + F G +N + + + + +
Sbjct: 1009 ---NAFCGKLLAGINSLVKLF---------NWGVSKENKRELVHECSHMGHIIALKVETK 1056
Query: 240 FTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL 299
I VGD I Y ++ ++E++ D S + ++D +T + ++ ++ +
Sbjct: 1057 DNLIVVGDLMKSITLLQYQRESGRIEEVAHDFSSNWMTAVEILDDNTYLGAESSYNLFTV 1116
Query: 300 SCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTI 359
+ D L A+H+G+ R+GS + ++P L D +S S +T
Sbjct: 1117 Q-RNADADTEDKRGTLELCGAFHLGDSVNRFRRGSLVMRMPD---LSDDTSSL-SEISTW 1171
Query: 360 IASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSREN---PVGVP 416
+ T+ G + + + ++ LL VQ A+ + + HS+FRS N V +
Sbjct: 1172 LFGTISGGLGVVATLPKRDFMLLNKVQE--AMQKVVTGVGNFSHSDFRSFHNVQRSVEMR 1229
Query: 417 KILDGDMLSQFLELTSTQQEAV--LSFTLGSFDTIK 450
+DGD++ FL+L+ Q AV LS S D +K
Sbjct: 1230 NFIDGDLVEIFLDLSKEDQVAVSELSGVSNSEDLVK 1265
>gi|68476233|ref|XP_717766.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
albicans SC5314]
gi|68476422|ref|XP_717672.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
albicans SC5314]
gi|74586274|sp|Q5A7S5.1|RSE1_CANAL RecName: Full=Pre-mRNA-splicing factor RSE1
gi|46439394|gb|EAK98712.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
albicans SC5314]
gi|46439495|gb|EAK98812.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
albicans SC5314]
Length = 1219
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 142/357 (39%), Gaps = 69/357 (19%)
Query: 103 TKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDA 162
+K ++ ++ N SM+ S +S+ +VG T Q + L +S D +
Sbjct: 871 SKSNQVIQSLQLDGNESIVSMSAVSFNKTSTPSVPASHLVVGVCTNQ---TILPNSYDKS 927
Query: 163 SCDGIKLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVR 222
K+ + L+L + T + + + D+ +AS GN +R
Sbjct: 928 YLYTFKIGKK---HLQLVHKTELDHIPQVLENFQDKLLVAS-GN-------------HIR 970
Query: 223 RFAVGRTRFM------------IMLLTAHFTRIAVGDC-RDGILFYSYHEDARKLEQIYC 269
+ +G+ + + I + RI + D + I+F + E +
Sbjct: 971 LYDIGQKQLLKKSTTIIDFSTNINKIIPQTNRIIICDSHKSSIVFAKFDESQNQFVPFAD 1030
Query: 270 DPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTP-------NCAY- 321
D +R + + +D+DT + D+ G+I V + + A + + +C Y
Sbjct: 1031 DVMKRQITSIMNLDIDTLIGGDKFGNIFVTRIDEDISKQADDDWTILKTQDGILNSCPYK 1090
Query: 322 -------HMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP- 373
H+G+I S G LA ES +I + L G+I + IP
Sbjct: 1091 LQNLIEFHIGDIITSFNLGCL------------NLAGTES----VIYTGLQGTIGLLIPL 1134
Query: 374 ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLEL 430
+S E ELL +Q L + L+G DH + RS NP + ++DGD+L +FLE
Sbjct: 1135 VSKSEVELLFNLQ--LYMQQSQNNLVGKDHLKLRSYYNP--IKNVIDGDLLERFLEF 1187
>gi|378730762|gb|EHY57221.1| pre-mRNA-splicing factor rse1 [Exophiala dermatitidis NIH/UT8656]
Length = 1210
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 36/222 (16%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI V D ++ + + Y KL D R C ++D +T D
Sbjct: 980 LIVGLQTQGSRIIVSDIQESVTYCVYKFQENKLIPFCDDVIARWTTCCTMVDYETVAGGD 1039
Query: 292 RKGSIAVLSCSDRLEDNASPE------------CNLTPN-----CAYHMGEIAVSIRKGS 334
+ G++ +L C ++ + A + N TPN Y G+I SI+K +
Sbjct: 1040 KFGNLWMLRCPQKVSEEADEDNSGVHLLHERGYLNGTPNRLSLMIHYFPGDIPTSIQKTN 1099
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHP 393
+ + + + G++ I +P +S E+ + ++++ +LA
Sbjct: 1100 LV----------------AGGRDVVFWTGFQGTLGILVPFVSREDVDFFQSLEMQLASSN 1143
Query: 394 LTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQ 435
PLLG DH +RS P ++DGD+ F L + ++
Sbjct: 1144 GNPPLLGRDHLIYRSYYAP--SKGVIDGDLCETFFLLPNDKK 1183
>gi|330805789|ref|XP_003290860.1| hypothetical protein DICPUDRAFT_95240 [Dictyostelium purpureum]
gi|325078985|gb|EGC32608.1| hypothetical protein DICPUDRAFT_95240 [Dictyostelium purpureum]
Length = 1327
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 348 CLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFR 407
CL + + + II +LLGS+++F +S EY++L +Q L + P+ NDH+ +R
Sbjct: 1207 CLKLLQLNNSKIITCSLLGSVILFGKLSRVEYKVLLTIQNSLKNDKSSKPITNNDHNLYR 1266
Query: 408 SRENPVGVPKILDGDMLSQFLELTSTQQEAVLS--FTLGSFDTIKA 451
S +LDGD+L QFL L Q ++S F L + K
Sbjct: 1267 SE--ISNCKNVLDGDLLYQFLFLEEIDQINLISKLFKLNDINNTKV 1310
>gi|402222132|gb|EJU02199.1| hypothetical protein DACRYDRAFT_21931 [Dacryopinax sp. DJM-731 SS1]
Length = 1209
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 108/243 (44%), Gaps = 41/243 (16%)
Query: 221 VRRFAVGRTRFM-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYC 269
+R F +G+ R + I+ L+ +RI VGD + I F +Y +L I+
Sbjct: 958 LRIFDMGKKRLLRKCENKSFATAIVTLSTQGSRIIVGDMAESIYFATYKPPENRL-LIFA 1016
Query: 270 DPSQ-RLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAV 328
D SQ R + ++D DT D+ G++ V +RL + + P A + E
Sbjct: 1017 DDSQPRWITASAMVDYDTVCAGDKFGNVFV----NRLPPKVGEQVDEDPTGAGVLHE--- 1069
Query: 329 SIRKGSFI-----YKLPADDALGDCLASFES------SQTTIIASTLLGSIVIFIP-ISS 376
KG F+ + A +GD + S + ++ + L G+I + IP IS
Sbjct: 1070 ---KGLFMGAPHKTNMLAHYYVGDIITSMHKVALVTGGRDIVLYTGLHGTIGVLIPFISK 1126
Query: 377 EEYELLEAVQARLAIHPLTAP-LLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQ 435
E+ + + ++ + AP L+G DH +R P V ++DGD+ F L + +Q
Sbjct: 1127 EDVDFIRTLEQHMRTE---APSLVGRDHLTYRGYYVP--VKGVVDGDLCELFSLLPTQKQ 1181
Query: 436 EAV 438
+++
Sbjct: 1182 QSI 1184
>gi|224004656|ref|XP_002295979.1| spliceosome associated factor 3b, subunit 3; 130kD spliceosome
associated protein [Thalassiosira pseudonana CCMP1335]
gi|209586011|gb|ACI64696.1| spliceosome associated factor 3b, subunit 3; 130kD spliceosome
associated protein [Thalassiosira pseudonana CCMP1335]
Length = 1212
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 93/225 (41%), Gaps = 40/225 (17%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
M+ L A R VGD + F Y A +L + D + R + L+D++T V D
Sbjct: 987 MVKTLQAAGDRAFVGDMMQSMQFIRYDSTANRLVLVAKDRNPRPITCQELLDINTVAVGD 1046
Query: 292 RKGSIAVL-----------------SCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGS 334
+ G++ +L + D D+A+P+ L C YH+GE+ S+ + S
Sbjct: 1047 KFGNVTILRLPRGADAGAIDVTGTRALWDSARDDATPK--LETLCTYHVGEVVTSMTRAS 1104
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHP 393
+ ++I T+ G + F+P +S ++ E +++ L
Sbjct: 1105 LV----------------AGGAESLIYVTVTGRVGAFVPFTSRDDVEFYTSLEGFLRTE- 1147
Query: 394 LTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
T G D +RS P + I+DGD+ F +L ++ +
Sbjct: 1148 -TPRPTGRDPQSYRSYYAP--MKHIVDGDLCDAFAQLPYETKQKI 1189
>gi|344231825|gb|EGV63707.1| hypothetical protein CANTEDRAFT_134986 [Candida tenuis ATCC 10573]
gi|344231826|gb|EGV63708.1| hypothetical protein CANTEDRAFT_134986 [Candida tenuis ATCC 10573]
Length = 991
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 100/242 (41%), Gaps = 47/242 (19%)
Query: 225 AVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDV 284
A+ +I ++ RI VGD + +F + E++ I D R + +D
Sbjct: 772 AIKHINKIIRIVYQGKDRIVVGDSNNSTIFCKFIENS--FVPISDDTMNRQITSLSTLDY 829
Query: 285 DTAVVSDRKGSIAV--------LSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFI 336
DT + D+ G++ V + + +S C + + +I +S KG+ +
Sbjct: 830 DTVIGGDKFGNVFVNRIKYDNTYFVEESYLNGSSGRCQTL--AEFFLNDIPMSFTKGTLV 887
Query: 337 YKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTA 396
P II + L G+I I +PIS +++ L + L+I
Sbjct: 888 LGGPE----------------VIIYAGLQGTIGILLPISESDFKFL----SNLSIELNKD 927
Query: 397 PLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLP 456
LLG DH +FR N ++DGD++ +FLEL ++ + IK S+KL
Sbjct: 928 LLLGRDHMKFRGYYN--STHNVIDGDIIEKFLELNASSR-------------IKISNKLN 972
Query: 457 PS 458
S
Sbjct: 973 KS 974
>gi|150863836|ref|XP_001382447.2| hypothetical protein PICST_54680 [Scheffersomyces stipitis CBS 6054]
gi|149385092|gb|ABN64418.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 1228
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 39/210 (18%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
RIA GD I+F + + D +R + +D DT + D+ G++ V
Sbjct: 1011 RIAFGDSHSSIVFAKFDSAENRFVPFADDIMKRQITAVAALDYDTVIGGDKFGNVFVSRV 1070
Query: 302 SDRL-----ED-----------NASPECNLTPN-CAYHMGEIAVSIRKGSFIYKLPADDA 344
D + ED NASP + T N C + + + S KGS
Sbjct: 1071 PDSVSKKSDEDWSLLKVQESYLNASP--SRTKNLCEFFLSDTPTSFTKGSM--------T 1120
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIPISSE-EYELLEAVQARLAIHPLTAPLLGNDH 403
+G II + + G++ + +P+S++ E + + +++ L + LLG DH
Sbjct: 1121 IG--------GHDGIIYTGIQGTVGLLLPLSTKSEVQFINSLEQSLR-QQMGFNLLGMDH 1171
Query: 404 SEFRSRENPVGVPKILDGDMLSQFLELTST 433
+FRS NP V ++DGD++ ++ EL+ +
Sbjct: 1172 LKFRSYYNP--VKNVIDGDLIEKYYELSQS 1199
>gi|125580741|gb|EAZ21672.1| hypothetical protein OsJ_05303 [Oryza sativa Japonica Group]
Length = 1224
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 120/296 (40%), Gaps = 65/296 (21%)
Query: 173 ETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM 232
E L L + T + LA+C + R LA G+ +R + +G+ + +
Sbjct: 941 EGRSLELLHKTQVEEVPLALCQFQGR-LLAGVGSV-------------LRLYDLGKRKLL 986
Query: 233 -----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL 281
I+ + + RI VGD ++ + Y D +L D R +
Sbjct: 987 RKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANH 1046
Query: 282 MDVDTAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMG 324
+D DT +D+ G+I SD +E++ + + N PN +H+G
Sbjct: 1047 IDFDTMAGADKFGNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVG 1106
Query: 325 EIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLE 383
++ ++K S I P G+CL I T++GS+ + +S E+ +
Sbjct: 1107 DVVTCLQKASLI---PGG---GECL----------IYGTVMGSVGALLAFTSREDVDFFS 1150
Query: 384 AVQARL-AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
++ L HP PL G DH +RS P V ++DGD+ QF L + Q +
Sbjct: 1151 HLEMHLRQEHP---PLCGRDHMAYRSAYFP--VKDVIDGDLCEQFPSLPADMQRKI 1201
>gi|42409127|dbj|BAD10377.1| putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa Japonica
Group]
gi|42409258|dbj|BAD10521.1| putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa Japonica
Group]
gi|125538000|gb|EAY84395.1| hypothetical protein OsI_05771 [Oryza sativa Indica Group]
Length = 1234
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 120/296 (40%), Gaps = 65/296 (21%)
Query: 173 ETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM 232
E L L + T + LA+C + R LA G+ +R + +G+ + +
Sbjct: 951 EGRSLELLHKTQVEEVPLALCQFQGR-LLAGVGSV-------------LRLYDLGKRKLL 996
Query: 233 -----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL 281
I+ + + RI VGD ++ + Y D +L D R +
Sbjct: 997 RKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANH 1056
Query: 282 MDVDTAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMG 324
+D DT +D+ G+I SD +E++ + + N PN +H+G
Sbjct: 1057 IDFDTMAGADKFGNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVG 1116
Query: 325 EIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLE 383
++ ++K S I P G+CL I T++GS+ + +S E+ +
Sbjct: 1117 DVVTCLQKASLI---PGG---GECL----------IYGTVMGSVGALLAFTSREDVDFFS 1160
Query: 384 AVQARL-AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
++ L HP PL G DH +RS P V ++DGD+ QF L + Q +
Sbjct: 1161 HLEMHLRQEHP---PLCGRDHMAYRSAYFP--VKDVIDGDLCEQFPSLPADMQRKI 1211
>gi|452820919|gb|EME27955.1| splicing factor 3B subunit 3 [Galdieria sulphuraria]
Length = 1294
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 28/210 (13%)
Query: 240 FTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL 299
+ RI + D ++ + Y Y I D + L+D DT + D+ G+I++L
Sbjct: 1051 YDRIFLSDVQESVFLYRYSAADNLFLCIADDYLPKWCTTMCLLDYDTVAIGDKMGNISIL 1110
Query: 300 SCSDRLEDNAS------PECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
RL A P L A H ++ GS I CL+ E
Sbjct: 1111 ----RLPPEAGTFIEQDPTGGLLSKEAPHHFQLEACYYVGSVI----------QCLSKVE 1156
Query: 354 SSQTTI---IASTLLGSIVIFIPI-SSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSR 409
+ + TL G+I + IP+ S+ + EL +A++ L + +PL G H +RS
Sbjct: 1157 WTTGDVPLLFYGTLDGAIGVMIPLRSTLDMELFQALE--LQLREYRSPLCGRHHLAYRSY 1214
Query: 410 ENPVGVPKILDGDMLSQFLELTSTQQEAVL 439
PV ++DGD+ +F L+ QQE ++
Sbjct: 1215 FFPVR--HVIDGDLCEEFYRLSLEQQEKIV 1242
>gi|297598550|ref|NP_001045829.2| Os02g0137400 [Oryza sativa Japonica Group]
gi|255670583|dbj|BAF07743.2| Os02g0137400 [Oryza sativa Japonica Group]
Length = 845
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 120/296 (40%), Gaps = 65/296 (21%)
Query: 173 ETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM 232
E L L + T + LA+C + R LA G+ +R + +G+ + +
Sbjct: 562 EGRSLELLHKTQVEEVPLALCQFQGR-LLAGVGSV-------------LRLYDLGKRKLL 607
Query: 233 -----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL 281
I+ + + RI VGD ++ + Y D +L D R +
Sbjct: 608 RKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANH 667
Query: 282 MDVDTAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMG 324
+D DT +D+ G+I SD +E++ + + N PN +H+G
Sbjct: 668 IDFDTMAGADKFGNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVG 727
Query: 325 EIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLE 383
++ ++K S I P G+CL I T++GS+ + +S E+ +
Sbjct: 728 DVVTCLQKASLI---PGG---GECL----------IYGTVMGSVGALLAFTSREDVDFFS 771
Query: 384 AVQARL-AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
++ L HP PL G DH +RS P V ++DGD+ QF L + Q +
Sbjct: 772 HLEMHLRQEHP---PLCGRDHMAYRSAYFP--VKDVIDGDLCEQFPSLPADMQRKI 822
>gi|66811906|ref|XP_640132.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
gi|74854972|sp|Q54SA7.1|SF3B3_DICDI RecName: Full=Probable splicing factor 3B subunit 3
gi|60468134|gb|EAL66144.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
Length = 1256
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 91/215 (42%), Gaps = 38/215 (17%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS- 300
R+ VGD ++ I F Y L D + R + V++D DT +D+ G+I VL
Sbjct: 1038 RLVVGDIQESIHFIKYKRSENMLYVFADDLAPRWMTSSVMLDYDTVAGADKFGNIFVLRL 1097
Query: 301 ---CSDRLEDN--------ASPECNLTPNCAYHM-----GEIAVSIRKGSFIYKLPADDA 344
SD +E++ S N P+ H+ G+ ++ K S + P
Sbjct: 1098 PLLISDEVEEDPTGTKLKFESGTLNGAPHKLDHIANFFVGDTVTTLNKTSLVVGGPE--- 1154
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDH 403
I+ +T+ G+I IP +S E+ + ++ + L PL G DH
Sbjct: 1155 -------------VILYTTISGAIGALIPFTSREDVDFFSTLEMNMRSDCL--PLCGRDH 1199
Query: 404 SEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+RS P V I+DGD+ QF L +Q ++
Sbjct: 1200 LAYRSYYFP--VKNIIDGDLCEQFSTLNYQKQLSI 1232
>gi|302916981|ref|XP_003052301.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733240|gb|EEU46588.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1212
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 94/224 (41%), Gaps = 38/224 (16%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI VGD + G+ Y KL D R ++D ++ D+
Sbjct: 985 IVSLNTQGSRIVVGDVQQGVTLVVYKSATNKLIPFADDTVARWTTCTTMVDYESIAGGDK 1044
Query: 293 KGSIAVLSCSDRLEDNASPE------------CNLTPN-----CAYHMGEIAVSIRKGSF 335
G++ ++ C ++ + A E + TP+ C ++ ++ SI K S
Sbjct: 1045 FGNMFIVRCPEKASEEADEEQSGLHLINARDYLHGTPHRLGLMCHFYTQDVPTSITKTSL 1104
Query: 336 IYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPL 394
+ Q ++ S ++G+I +FIP +S E+ + + ++ L
Sbjct: 1105 VV----------------GGQEILLWSGIMGTIGVFIPFVSREDADFFQNLEQHLRTE-- 1146
Query: 395 TAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
PL G DH +R P V ++DGD+ ++ L + +++ +
Sbjct: 1147 DPPLAGRDHLMYRGYYAP--VKGVIDGDLCERYNLLPNDKKQMI 1188
>gi|66826737|ref|XP_646723.1| hypothetical protein DDB_G0270344 [Dictyostelium discoideum AX4]
gi|60474585|gb|EAL72522.1| hypothetical protein DDB_G0270344 [Dictyostelium discoideum AX4]
Length = 1547
Score = 58.5 bits (140), Expect = 7e-06, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 349 LASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRS 408
L S S++ II +LLGS+++F +S EY +L +Q L T PLL NDH +RS
Sbjct: 1423 LKSPLSNKNKIITCSLLGSVIVFGKLSKREYRILNNIQQILKKSNNTRPLLNNDHQLYRS 1482
Query: 409 RENPVGVPKILDGDMLSQFLELTSTQQ 435
+ +LDGD+L QFL L Q
Sbjct: 1483 ELS--FSKNMLDGDLLFQFLFLDDEDQ 1507
>gi|342885857|gb|EGU85809.1| hypothetical protein FOXB_03657 [Fusarium oxysporum Fo5176]
Length = 1189
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 28/203 (13%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI VGD + G+ + Y + KL D R ++D ++ D+
Sbjct: 972 IVSLNTQGSRIIVGDVQQGVTYVVYKPASNKLIPFVDDTIARWTTCTTMVDYESVAGGDK 1031
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMG----EIAVSIRKGSFIYKLPADDAL 345
G++ ++ C ++ + A E +L Y G +I SI K S +
Sbjct: 1032 FGNMFIVRCPEKASEEADEEQTGLHLINAREYLHGTPHRDIPTSITKTSLVV-------- 1083
Query: 346 GDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHS 404
Q ++ S ++G+I +FIP IS E+ + + ++ L PL G DH
Sbjct: 1084 --------GGQEILLWSGIMGTIGVFIPFISREDADFFQNLEQHLRTE--DPPLAGRDHL 1133
Query: 405 EFRSRENPVGVPKILDGDMLSQF 427
+R P V ++DGD+ ++
Sbjct: 1134 MYRGYYAP--VKGVIDGDLCERY 1154
>gi|400597418|gb|EJP65151.1| CPSF A subunit region [Beauveria bassiana ARSEF 2860]
Length = 1212
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 91/222 (40%), Gaps = 38/222 (17%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI VGD + G+ Y + KL D R ++D ++ D+
Sbjct: 985 IVSLNTQGSRIVVGDVQQGVTLVVYKPASNKLIPFADDTIARWTTCTTMVDYESVAGGDK 1044
Query: 293 KGSIAVLSCSDRLEDNASPEC-----------------NLTPNCAYHMGEIAVSIRKGSF 335
G++ ++ + + A E L C + ++ SI K S
Sbjct: 1045 FGNMFIVRSPAKASEEADEEQAGLHLVNARDYLHGAQHRLELMCHFFTQDVPTSINKTSL 1104
Query: 336 IYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPL 394
+ Q ++ S ++G+I +FIP +S E+ + ++++ L
Sbjct: 1105 VV----------------GGQDVLLWSGIMGTIGVFIPFVSREDADFFQSLEQHLRTE-- 1146
Query: 395 TAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQE 436
APL G DH +RS P V ++DGD+ +F L + +++
Sbjct: 1147 DAPLAGRDHLMYRSYYAP--VKGVIDGDLCERFAALPNDKKQ 1186
>gi|346971485|gb|EGY14937.1| pre-mRNA-splicing factor RSE1 [Verticillium dahliae VdLs.17]
Length = 1230
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 96/213 (45%), Gaps = 14/213 (6%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L+ +RI VGD + G+ + Y + KL D R + ++D ++ D
Sbjct: 1002 LIVSLSTQGSRIVVGDVQQGVTYVVYKPLSNKLIPFVDDTVARWMTCTTMVDYESVAGGD 1061
Query: 292 RKGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
+ G+I ++ ++ A E +LT Y G + + S + + D L
Sbjct: 1062 KFGNIFIVRAPEKASQEADEEGAGLHLTNTRDYLHG----TPHRLSLVSHFYSQDVLTSI 1117
Query: 349 LAS--FESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSE 405
+ Q ++ S + G+I +FIP ++ E+ + + ++ L APL G DH
Sbjct: 1118 TKTSLVVGGQDVLLWSGISGTIGVFIPFVTREDADFFQTLEQHLRTE--DAPLAGRDHLM 1175
Query: 406 FRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+R P V ++DGD+ ++ L + +++ +
Sbjct: 1176 YRGYYAP--VKGVIDGDLCERYTLLPNDKKQMI 1206
>gi|115465791|ref|NP_001056495.1| Os05g0592400 [Oryza sativa Japonica Group]
gi|48475231|gb|AAT44300.1| putative DNA damage binding protein 1 [Oryza sativa Japonica Group]
gi|113580046|dbj|BAF18409.1| Os05g0592400 [Oryza sativa Japonica Group]
gi|215694552|dbj|BAG89545.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632766|gb|EEE64898.1| hypothetical protein OsJ_19757 [Oryza sativa Japonica Group]
Length = 1090
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E++ D + ++ ++D + + ++ +I V
Sbjct: 882 IVVGDLMKSISLLVYKHEESAIEELARDYNANWMSAVEMLDDEIYIGAENNYNIFTVRKN 941
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
SD D + YH+GE +R GS + +LP D +G T+I
Sbjct: 942 SDAATDEERGRLEVVGE--YHLGEFVNRLRHGSLVMRLP-DSEMGQI--------PTVIF 990
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGN-DHSEFRSRENPVGVPK--- 417
T+ G I I + E+Y LE +Q+ L +GN H ++RS N +
Sbjct: 991 GTINGVIGIIASLPHEQYVFLEKLQSTLVKF---IKGVGNLSHEQWRSFHNDKKTSEARN 1047
Query: 418 ILDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L+ + E V
Sbjct: 1048 FLDGDLIESFLDLSRNKMEEV 1068
>gi|218197365|gb|EEC79792.1| hypothetical protein OsI_21216 [Oryza sativa Indica Group]
Length = 1089
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E++ D + ++ ++D + + ++ +I V
Sbjct: 881 IVVGDLMKSISLLVYKHEESAIEELARDYNANWMSAVEMLDDEIYIGAENNYNIFTVRKN 940
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
SD D + YH+GE +R GS + +LP D +G T+I
Sbjct: 941 SDAATDEERGRLEVVGE--YHLGEFVNRLRHGSLVMRLP-DSEMGQI--------PTVIF 989
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGN-DHSEFRSRENPVGVPK--- 417
T+ G I I + E+Y LE +Q+ L +GN H ++RS N +
Sbjct: 990 GTINGVIGIIASLPHEQYVFLEKLQSTLVKF---IKGVGNLSHEQWRSFHNDKKTSEARN 1046
Query: 418 ILDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L+ + E V
Sbjct: 1047 FLDGDLIESFLDLSRNKMEEV 1067
>gi|68531971|ref|XP_723667.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478038|gb|EAA15232.1| Drosophila melanogaster CG13900 gene product [Plasmodium yoelii
yoelii]
Length = 1235
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 124/294 (42%), Gaps = 49/294 (16%)
Query: 174 TWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM- 232
++L L + T CP+ R + S GN ++R +A+G+ + +
Sbjct: 939 NYKLNLLHITPIEDQPYCFCPFNGR-VIVSVGN-------------KLRIYALGKKKLLK 984
Query: 233 ----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLM 282
I+ + RI D R+ +L + Y + + I D R + ++
Sbjct: 985 KCEYKDIPEAIVSIKVSGDRIFASDIRESVLIFFYDSNQNLIRLISDDIIPRWITCSEIL 1044
Query: 283 DVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTP-----------NCAYHMGEIAVSIR 331
D T + +D+ S+ +L S L +P C+L P N ++ GE+ S
Sbjct: 1045 DHHTIIAADKFDSVFILRVS-LLTFFITPFCHLVPEEAKQEEYGIANKCWYGGEVINSST 1103
Query: 332 KGSFIYKLPADDALGDCLASFE------SSQTTIIASTLLGSIVIFIPI-SSEEYELLEA 384
K + + + +G+ + S + +S II ST++G+I FIP S EE EL +
Sbjct: 1104 KNRKMEHIMSFH-IGEIVTSLQKVKLSPTSSECIIYSTIMGTIGAFIPYDSKEELELTQH 1162
Query: 385 VQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
++ L + L G +H FRS +P V ++DGD+ QF L Q +
Sbjct: 1163 LEIILRTEKHS--LCGREHIFFRSYYHP--VQHVIDGDLCEQFSSLPFEVQRKI 1212
>gi|440792421|gb|ELR13643.1| splicing factor 3b subunit 3, putative [Acanthamoeba castellanii str.
Neff]
Length = 1227
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 92/213 (43%), Gaps = 17/213 (7%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I +T RI VGD + F Y + +L D + R + ++D DT +D+
Sbjct: 1002 IQSITTQGERIIVGDLAESFHFVKYRKAENQLNVYADDSNPRWLTASQMLDYDTMAGADK 1061
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLAS- 351
G++ ++ RL + E P + M + S+ +F + + +GD + S
Sbjct: 1062 FGNVFIV----RLPSEVNEELEDNPMGNFLMSK--QSLNGAAFKLQTLINFHVGDTINSM 1115
Query: 352 -----FESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSE 405
F ++ +TL+G + +P +S E+ + ++ + + PL G DH
Sbjct: 1116 TKASLFTGGADVLVYTTLMGGMGALLPFVSREDVDFFSHLE--MHMRSELPPLCGRDHLA 1173
Query: 406 FRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+RS P V ++DGD+ QF L +Q +
Sbjct: 1174 YRSYYFP--VKDVIDGDLCEQFSLLPPEKQRTI 1204
>gi|358391805|gb|EHK41209.1| hypothetical protein TRIATDRAFT_135379 [Trichoderma atroviride IMI
206040]
Length = 1212
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 92/225 (40%), Gaps = 38/225 (16%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I L+ RI VGD + GI + Y + KL D R ++D +T D
Sbjct: 984 LINSLSTQGNRIIVGDVQQGITYVVYKQTTNKLIPFVDDTVARWTTCSTMVDYETVAGGD 1043
Query: 292 RKGSIAVLSCSDRLEDNASPEC-----------------NLTPNCAYHMGEIAVSIRKGS 334
+ G+I V+ + + A E L C + +I SI K S
Sbjct: 1044 KFGNIFVVRSPQKASEEADEEQAGLHLLNARDYLHGRSHRLDLMCHLYTQDIPTSITKTS 1103
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHP 393
+ Q ++ S L+G+I + IP ++ E+ + ++++ L +
Sbjct: 1104 LVV----------------GGQDVLLWSGLMGTIGVLIPFVTREDTDFFQSLE--LHLRA 1145
Query: 394 LTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
PL G DH +RS P V ++DGD+ ++ L + +++ +
Sbjct: 1146 EDPPLAGRDHLMYRSYYAP--VKGVIDGDLCERYTLLPNDKKQMI 1188
>gi|242060436|ref|XP_002451507.1| hypothetical protein SORBIDRAFT_04g003000 [Sorghum bicolor]
gi|241931338|gb|EES04483.1| hypothetical protein SORBIDRAFT_04g003000 [Sorghum bicolor]
Length = 1232
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 120/296 (40%), Gaps = 65/296 (21%)
Query: 173 ETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM 232
E L L + T + LA+C + R LA G+ +R + +G+ + +
Sbjct: 949 EGRSLELLHKTQVEEVPLALCQFQGR-LLAGVGSV-------------LRLYDLGKRKLL 994
Query: 233 -----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL 281
I+ + + RI VGD ++ + Y D +L D R +
Sbjct: 995 RKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAAQH 1054
Query: 282 MDVDTAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMG 324
+D DT +D+ G+I SD +E++ + + N PN +H+G
Sbjct: 1055 IDFDTMAGADKFGNIYFARLPQDISDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVG 1114
Query: 325 EIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLE 383
++ ++K S I P G+CL I T++GS+ + +S E+ +
Sbjct: 1115 DVVTCLQKASLI---PGG---GECL----------IYGTVMGSVGALLAFTSREDVDFFS 1158
Query: 384 AVQARL-AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
++ L HP PL G DH +RS P V ++DGD+ Q+ L + Q +
Sbjct: 1159 HLEMHLRQEHP---PLCGRDHMAYRSAYFP--VKDVIDGDLCEQYPSLPADMQRKI 1209
>gi|12082087|dbj|BAB20761.1| UV-damaged DNA binding protein [Oryza sativa Japonica Group]
Length = 1090
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 19/201 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E++ D + ++ ++D + + ++ +I V
Sbjct: 882 IVVGDLMKSISLLVYKHEESAIEELARDYNANWMSAVEMLDDEIYIGAENNYNIFTVRKN 941
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
SD D + YH+GE R GS + +LP D +G T+I
Sbjct: 942 SDAATDEERGRLEVVGE--YHLGEFGNRFRHGSLVMRLP-DSEMGQI--------PTVIF 990
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGN-DHSEFRSRENPVGVPK--- 417
T+ G I I + E+Y LE +Q+ L +GN H ++RS N +
Sbjct: 991 GTINGVIGIIASLPHEQYVFLEKLQSTLVKF---IKGVGNLSHEQWRSFHNDKKTSEARN 1047
Query: 418 ILDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L+ + E V
Sbjct: 1048 FLDGDLIESFLDLSRNKMEEV 1068
>gi|440636768|gb|ELR06687.1| pre-mRNA-splicing factor rse1 [Geomyces destructans 20631-21]
Length = 1212
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 16/221 (7%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI V D ++ I F Y KL D R ++D +T D
Sbjct: 984 LIVGLQTQGSRIIVSDVQESITFVVYKFQENKLIPFADDTIARWTTCTTMVDYETVAGGD 1043
Query: 292 RKGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMGEI-AVSIRKGSFIYKLPADDALGD 347
+ G++ +L C + + A E +L Y G V++ +F +P +
Sbjct: 1044 KFGNLWLLRCPTKASEEADEEGSGAHLVHERQYLQGAPHRVALMAHNFANDIPTSIQKTN 1103
Query: 348 CLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEF 406
+A + ++ S L G+I I IP +S E+ + + ++ L APL G DH +
Sbjct: 1104 LVAG---GRDCLLWSGLQGTIAIMIPFVSREDVDFFQTLEQHLRTE--DAPLAGRDHLIY 1158
Query: 407 RSRENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGSFD 447
RS P V ++DGD+ ++ L + ++ + G FD
Sbjct: 1159 RSYYVP--VKGVIDGDLCERYTLLPTDKKMMI----AGEFD 1193
>gi|356536504|ref|XP_003536777.1| PREDICTED: splicing factor 3B subunit 3-like [Glycine max]
Length = 1214
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 119/292 (40%), Gaps = 65/292 (22%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+C + R LA G +R + +G+ R +
Sbjct: 935 LELLHKTQVEGVPLALCQFQGR-LLAGIGPV-------------LRLYDLGKKRLLRKCE 980
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + A+ RI VGD ++ + Y D +L D R + +D D
Sbjct: 981 NKLFPNTIISIHAYRDRIYVGDVQESFHYCKYRRDENQLYIFADDCVPRWLTASYHIDFD 1040
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G+I + SD +E++ + + N PN +H+G++
Sbjct: 1041 TMAGTDKFGNIYFVRLPQDVSDEIEEDPTGGRIKWEQGKLNGAPNKVEEIVQFHVGDVVT 1100
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSI-VIFIPISSEEYELLEAVQA 387
++K S I P G+C I+ T++GS+ + S ++ + ++
Sbjct: 1101 CLQKASLI---PGG---GEC----------IVFGTVMGSVGALHAFTSRDDVDFFSHLEM 1144
Query: 388 RL-AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ HP PL G DH +RS P V ++DGD+ Q+ L Q +
Sbjct: 1145 HMRQDHP---PLCGRDHMAYRSAYFP--VKDVIDGDLCEQYPTLPMDLQRKI 1191
>gi|401883281|gb|EJT47496.1| U2 snRNA binding protein [Trichosporon asahii var. asahii CBS 2479]
Length = 1216
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQ-RLVADCVLMDVDTAVVSDRKGSIAVLS 300
RI VGD ++ + Y + I+ D SQ R + +D DT +D+ G+I V
Sbjct: 997 RIIVGDLQESTFYCVYRSIPSRQLLIFADDSQPRFLTAVCNVDYDTVCCADKFGNIFV-- 1054
Query: 301 CSDRLEDNASPECNLTPNCA---YHMGEIAVSIRKGSFIYKLPADDALGDCLASFE---- 353
+RLE+ S + + P A + G + S K I A +G + S
Sbjct: 1055 --NRLEERVSEKVDDDPTGAVILHEKGFLMGSANKTDLI----AHYNVGSVVTSLTKVSV 1108
Query: 354 --SSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRE 410
+ ++ +T+ G++ +P IS+++ E + ++ + I L L+G DH +R
Sbjct: 1109 APGGRDVVVYTTISGAVGALVPFISNDDVEFMTTLE--MHIRSLNTSLVGRDHLAYRGYY 1166
Query: 411 NPVGVPKILDGDMLSQFLELTSTQQEAV 438
PV ++DGD+ F L QQ+A+
Sbjct: 1167 APVKA--VVDGDLCESFNMLPYPQQQAI 1192
>gi|406698009|gb|EKD01256.1| U2 snRNA binding protein [Trichosporon asahii var. asahii CBS 8904]
Length = 1216
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQ-RLVADCVLMDVDTAVVSDRKGSIAVLS 300
RI VGD ++ + Y + I+ D SQ R + +D DT +D+ G+I V
Sbjct: 997 RIIVGDLQESTFYCVYRSIPSRQLLIFADDSQPRFLTAVCNVDYDTVCCADKFGNIFV-- 1054
Query: 301 CSDRLEDNASPECNLTPNCA---YHMGEIAVSIRKGSFIYKLPADDALGDCLASFE---- 353
+RLE+ S + + P A + G + S K I A +G + S
Sbjct: 1055 --NRLEERVSEKVDDDPTGAVILHEKGFLMGSANKTDLI----AHYNVGSVVTSLTKVSV 1108
Query: 354 --SSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRE 410
+ ++ +T+ G++ +P IS+++ E + ++ + I L L+G DH +R
Sbjct: 1109 APGGRDVVVYTTISGAVGALVPFISNDDVEFMTTLE--MHIRSLNTSLVGRDHLAYRGYY 1166
Query: 411 NPVGVPKILDGDMLSQFLELTSTQQEAV 438
PV ++DGD+ F L QQ+A+
Sbjct: 1167 APVKA--VVDGDLCESFNMLPYPQQQAI 1192
>gi|325186344|emb|CCA20849.1| predicted protein putative [Albugo laibachii Nc14]
Length = 1148
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 102/224 (45%), Gaps = 22/224 (9%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+++ + + I VGD I ++ + +E+I D + + ++D D V S+
Sbjct: 903 LVLYMESRGDFIVVGDLMKSISLLNHKQLDGSIEEIARDLNSNWMTAVGIIDDDNYVGSE 962
Query: 292 RKGSIAVLSCSDRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYK----------- 338
++ + R AS E L YH+GE R GS + +
Sbjct: 963 TDFNLFTVQ---RNSGAASDEERGRLETIGEYHLGEFVNRFRYGSLVMQHNLSIGAEAPG 1019
Query: 339 LPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPL 398
+ D + L+ S Q +++ T+ G I + +PIS E++E L VQ+ A++ + +
Sbjct: 1020 ISLSDDRPESLSPL-SVQRSMLFGTVSGMIGVILPISKEKHEFLMRVQS--ALNQVIQGV 1076
Query: 399 LGNDHSEFRSREN---PVGVPKILDGDMLSQFLELTSTQQEAVL 439
G HSE+R+ EN + +DGD++ FL+L+ + + V+
Sbjct: 1077 GGFSHSEWRTFENRRSSIEAHNFIDGDLIESFLDLSKDEMKQVV 1120
>gi|294654658|ref|XP_456718.2| DEHA2A08932p [Debaryomyces hansenii CBS767]
gi|218511767|sp|Q6BYK1.2|RSE1_DEBHA RecName: Full=Pre-mRNA-splicing factor RSE1
gi|199429049|emb|CAG84677.2| DEHA2A08932p [Debaryomyces hansenii CBS767]
Length = 1256
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 91/222 (40%), Gaps = 45/222 (20%)
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
+RI VGD F Y + D +R + V +D DT + D+ G+I V
Sbjct: 1026 SRIVVGDSSMSTTFVKYDSTENQFIPFADDIMKRQITALVTLDYDTIIGGDKFGNIFVSR 1085
Query: 301 CSDRLEDNASPECN---------------LTPNCAYHMGEIAVSIRKGSFIYKLPADDAL 345
+ + + + + L C +++ +I S KGS +
Sbjct: 1086 VPETISQQSDKDWSLLRYQESYLNGSGSRLKNICEFYLQDIPTSFTKGSLVM-------- 1137
Query: 346 GDCLASFESSQTTIIASTLLGSIVIFIPISSE-EYELLEAVQARLAIH-----------P 393
+ +II + + G++ + +P+S+E E + L +Q L +
Sbjct: 1138 --------GGKESIIYTGIQGTLGLLLPLSTENEVKFLGDLQLLLRKYFDYNFDDFDKDK 1189
Query: 394 LTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQ 435
LLG DH +FRS NP V ++DGD++ +F EL+ + +
Sbjct: 1190 NGYNLLGKDHLKFRSYYNP--VKNVMDGDLIERFYELSQSMK 1229
>gi|325189950|emb|CCA24429.1| splicing factor putative [Albugo laibachii Nc14]
Length = 1644
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 174/464 (37%), Gaps = 86/464 (18%)
Query: 7 LNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGS-VLSSFKLELG 65
N +K L TP++++ H SR LI++ ++ +S + LS + V++S + E
Sbjct: 1212 FNQQKCFLRYTPRRMVLHPPSRRLIIVESDYGEANAASKQLFGESLSDTPVIASEEPEED 1271
Query: 66 ETGKSMELVRV--GHEQ------VLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQN 117
E +++ RV HE V + A + E T R I C+ H
Sbjct: 1272 EDRQALLYPRVERSHEPGKWASCVRIFDPITCETIACHELEDNEHT--RSITTCVFH--- 1326
Query: 118 SDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQL 177
D G F + R P SSP+ ++ E QL
Sbjct: 1327 -DRGGEVFVIIGSVKNLRLHPI-----------------SSPEGGLLRVYRV--VEGSQL 1366
Query: 178 RLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGR--TRFMIML 235
L ++T G+ A+ + R L S G + +++ R R T MI L
Sbjct: 1367 VLVHTTPVDGIPYAMIEFQGR-LLVSVGKVLRIYDL---GKRKLLRKCENRYFTSPMIDL 1422
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGS 295
+A RI D + I F Y + +L D + L+D DT D+ G+
Sbjct: 1423 KSAG-DRIYASDVHESIHFVKYKAEDNQLITFADDCVPHFMTSSTLLDYDTIAGGDKFGN 1481
Query: 296 IAVL----SCSDRLED-------------NASPECNLTPNCAYHMGEIAVSIRKGSFIYK 338
+ V SD +++ N +P L +H+GE+ S+ + S +
Sbjct: 1482 VFVTRLPAEVSDEIDNPTGNRMLWDTGLLNGAPH-KLEQIAQFHVGEVITSVLRTSLV-- 1538
Query: 339 LPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE----YELLEAVQARLAIHPL 394
I+ +T+LG I +P +S + Y LE + +
Sbjct: 1539 --------------PGGMEVILYTTILGRIGALVPFTSRDDVDFYTHLE-----MYMRQE 1579
Query: 395 TAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
APL G DH +RS P V + DGD+ QF L +Q+ +
Sbjct: 1580 KAPLCGRDHLSYRSYFIP--VKNVTDGDLCEQFSSLGPDKQKNI 1621
>gi|452845193|gb|EME47126.1| hypothetical protein DOTSEDRAFT_69180 [Dothistroma septosporum NZE10]
Length = 1223
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 89/211 (42%), Gaps = 12/211 (5%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L A RI GD +GI + Y ++ D QR ++D +TA D+
Sbjct: 996 IVSLEAQGNRIVCGDVSEGITYVVYKPKFNRMIPFVDDVVQRWTTCTTMVDYETAAGGDK 1055
Query: 293 KGSIAVLSCSDRLEDNASPECN----LTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
G++ V+ C ++ A E + + + +R F +P
Sbjct: 1056 FGNLWVVRCPEQPSQEADEEGAGGFIMNERSYLNGAPYRLDLRAHYFCQDIPTSMQRTAL 1115
Query: 349 LASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFR 407
+A Q + S L G++ + +P ++ E+ E ++ ++ PL G DH +R
Sbjct: 1116 VA---GGQELLFWSGLQGTLGMLVPFVTREDVEFFTQLEQQMRAE--DPPLAGRDHLMYR 1170
Query: 408 SRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
S P V ++DGD+ +F+ L+ ++ +
Sbjct: 1171 SYYVP--VKGVIDGDLCERFMHLSYDGKQKI 1199
>gi|167522323|ref|XP_001745499.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775848|gb|EDQ89470.1| predicted protein [Monosiga brevicollis MX1]
Length = 1172
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 102/226 (45%), Gaps = 42/226 (18%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
++ +T TRI D + ++ Y L D + R VL+D T +D+
Sbjct: 945 VVHITTMGTRICAADQKHSFVWLKYKPAENALTIFADDTNPRWCTRGVLLDYQTVAGADK 1004
Query: 293 KGSIAV----LSCSDRLEDN---------------ASPECNLTPNCAYHMGEIAVSIRKG 333
G+ V +D+++D+ AS + ++ C YH+GE +S++K
Sbjct: 1005 FGNFVVARLGTDLTDQIDDDPTGSKAFWSRGILNGASQKMDIL--CNYHVGETILSLQKV 1062
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIH 392
+ + P +C I+ +T+ G I +F+P S+ +++E +++ L +
Sbjct: 1063 TLV---PGG---AEC----------ILYTTMSGGIGLFLPFSNRDDFEFFTSLE--LHLR 1104
Query: 393 PLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
APL G DH +RS P V ++DGD+ Q+ L+++ + V
Sbjct: 1105 QEHAPLCGRDHLHYRSAYFP--VKSVIDGDLCEQYPLLSASVKNEV 1148
>gi|342320507|gb|EGU12447.1| Pre-mRNA-splicing factor RSE1 [Rhodotorula glutinis ATCC 204091]
Length = 1212
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 101/252 (40%), Gaps = 55/252 (21%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
MIM L TRI VGD ++ + + Y +L D S R +++D +T D
Sbjct: 985 MIMTLNTQGTRIIVGDAQESVYYALYKAPENRLLIFADDISPRWTTASIMVDYETVAAGD 1044
Query: 292 RKGSIAVLSCSDRLEDNASPECNLTPNCA---------------------YHMGEIAVSI 330
+ G+ V +RL S + + P A YH+G+I S+
Sbjct: 1045 KFGNFFV----NRLPKGVSSDVDDDPTGAGIMHEKPYLMGAPHRTHLLAHYHIGDIITSL 1100
Query: 331 RKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARL 389
K +A + ++ + L+G++ + +P +S+E+ + ++ L
Sbjct: 1101 HK----------------VALVAGGRDLLVYTGLMGTVGVLVPFVSNEDVDFFTTLEMHL 1144
Query: 390 AIHPLTAP-LLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQ-------EAVLSF 441
AP L G +H +RS PV +DGD+ + L +Q E +S
Sbjct: 1145 RSE---APSLCGREHLAYRSAYTPVKA--TVDGDLCEVYRSLPMAKQGQIAGELERTVSE 1199
Query: 442 TLGSFDTIKASS 453
+ D ++AS+
Sbjct: 1200 VIKKLDNVRASA 1211
>gi|356576847|ref|XP_003556541.1| PREDICTED: splicing factor 3B subunit 3-like [Glycine max]
Length = 1214
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 119/292 (40%), Gaps = 65/292 (22%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+C + R LA G +R + +G+ R +
Sbjct: 935 LELLHKTQVEGVPLALCQFQGR-LLAGIGPV-------------LRLYDLGKRRLLRKCE 980
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + A+ RI VGD ++ + Y D +L D R + +D D
Sbjct: 981 NKLFPNTIVSIHAYRDRIYVGDVQESFHYCKYRRDENQLYIFADDCVPRWLTASYHIDFD 1040
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G+I + SD +E++ + + N PN +H+G++
Sbjct: 1041 TMAGADKFGNIYFVRLPQDVSDEIEEDPTGGRIKWEQGKLNGAPNKVEEIVQFHIGDVVT 1100
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSI-VIFIPISSEEYELLEAVQA 387
++K S I P G+C I+ T++GS+ + S ++ + ++
Sbjct: 1101 CLQKASLI---PGG---GEC----------IVFGTVMGSVGALHAFTSRDDVDFFSHLEM 1144
Query: 388 RL-AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ HP PL G DH +RS P V ++DGD+ Q+ L Q +
Sbjct: 1145 HMRQDHP---PLCGRDHMAYRSAYFP--VKDVIDGDLCEQYPTLPMDLQRKI 1191
>gi|413935524|gb|AFW70075.1| hypothetical protein ZEAMMB73_605375 [Zea mays]
Length = 1229
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 120/296 (40%), Gaps = 65/296 (21%)
Query: 173 ETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM 232
E L L + T + LA+C + R LA G+ +R + +G+ + +
Sbjct: 946 EGRSLELLHKTQVEEVPLALCQFQGR-LLAGVGSV-------------LRLYDLGKRKLL 991
Query: 233 -----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL 281
++ + + RI VGD ++ + Y D +L D R +
Sbjct: 992 RKCENKLFPRTLVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTTAQH 1051
Query: 282 MDVDTAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMG 324
+D DT +D+ G+I SD +E++ + + N PN +H+G
Sbjct: 1052 IDFDTMAGADKFGNIYFARLPQDISDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVG 1111
Query: 325 EIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLE 383
++ ++K S I P G+CL I T++GS+ + +S E+ +
Sbjct: 1112 DVVTCLQKASLI---PGG---GECL----------IYGTVMGSVGALLAFTSREDVDFFS 1155
Query: 384 AVQARL-AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
++ L HP PL G DH +RS P V ++DGD+ Q+ L + Q +
Sbjct: 1156 HLEMHLRQEHP---PLCGRDHMAYRSAYFP--VKDVIDGDLCEQYPSLPADMQRKI 1206
>gi|70954357|ref|XP_746229.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56526771|emb|CAH77136.1| hypothetical protein PC000016.02.0 [Plasmodium chabaudi chabaudi]
Length = 372
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 16/206 (7%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
RI D R+ +L + Y + + I D R + ++D T + +D+ S+ +L
Sbjct: 155 RIFASDIRESVLIFFYDSNQNVIRLISDDIIPRWITCSEILDHHTIMAADKFDSVFIL-- 212
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE------SS 355
R+ + A E N ++ GE+ S K + + + +G+ + S + +S
Sbjct: 213 --RVPEEAKQEEYGIANKCWYGGEVISSSTKNRKMEHIMSFH-IGEIVTSLQKVKLSPAS 269
Query: 356 QTTIIASTLLGSIVIFIPI-SSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVG 414
II ST++G+I FIP + EE EL + ++ + + L G +H FRS +P
Sbjct: 270 SECIIYSTIMGTIGAFIPYDNKEELELTQHLE--IILRTEKHALCGREHIFFRSYYHP-- 325
Query: 415 VPKILDGDMLSQFLELTSTQQEAVLS 440
V ++DGD+ QF L Q V S
Sbjct: 326 VQHVIDGDLCEQFSSLPFDVQRKVAS 351
>gi|326511015|dbj|BAJ91855.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 706
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 120/297 (40%), Gaps = 65/297 (21%)
Query: 172 TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRF 231
E L L + T + L++C + R LA G+ +R + +G+ +
Sbjct: 422 NEGKSLELLHKTQVEEVPLSLCQFQGR-LLAGVGSV-------------LRLYDLGKRKL 467
Query: 232 M-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCV 280
+ I+ + + RI VGD ++ + Y D +L D R +
Sbjct: 468 LRKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAAN 527
Query: 281 LMDVDTAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHM 323
+D DT +D+ G+I SD +E++ + + N PN +H+
Sbjct: 528 HIDFDTMAGADKFGNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHV 587
Query: 324 GEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELL 382
G++ ++K S I P G+CL I T++GS+ + +S E+ +
Sbjct: 588 GDVVTCLQKASLI---PGG---GECL----------IYGTVMGSVGALLAFTSREDVDFF 631
Query: 383 EAVQARL-AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
++ L HP PL G DH +RS P V ++DGD+ Q+ L + Q +
Sbjct: 632 SHLEMHLRQEHP---PLCGRDHMAYRSAYFP--VKDVIDGDLCEQYPSLPADMQRKI 683
>gi|255316764|gb|ACU01763.1| putative DNA damage binding protein [Brachypodium distachyon]
Length = 384
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 13/198 (6%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E++ D + + ++D D V ++ ++ V
Sbjct: 176 IVVGDLMKSISLLVYKHEESAIEELARDYNANWMTAVEMIDDDIYVGAENSYNLFTVRKN 235
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
SD D + YH+GE R GS + +LP D +G T+I
Sbjct: 236 SDAATDEERGRLEVVGE--YHLGEFVNRFRHGSLVMRLP-DTEMGQI--------PTVIF 284
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDH-SEFRSRENPVGVPKILD 420
T+ G I I + ++Y LE +Q+ L L +D F + + LD
Sbjct: 285 GTINGVIGIIASLPHDQYVFLEKLQSILGKFIKGVGSLSHDQWRSFHNEKKTAEARNFLD 344
Query: 421 GDMLSQFLELTSTQQEAV 438
GD++ FL+L ++ E V
Sbjct: 345 GDLIESFLDLNRSKMEEV 362
>gi|225443992|ref|XP_002280744.1| PREDICTED: DNA damage-binding protein 1 isoform 2 [Vitis vinifera]
Length = 1068
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E+ D + ++ ++D D + ++ +I V
Sbjct: 860 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNIFTVRKN 919
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
S+ D + YH+GE R GS + +LP D T+I
Sbjct: 920 SEGATDEERGRLEVVGE--YHLGEFVNRFRHGSLVMRLPDSDV---------GQIPTVIF 968
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP---VGVPKI 418
T+ G I + + ++Y LE +QA L + + G H ++RS N V
Sbjct: 969 GTVNGVIGVIASLPHDQYVFLEKLQANL--RKVIKGVGGLSHEQWRSFNNEKKTVDAKNF 1026
Query: 419 LDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L T+ + +
Sbjct: 1027 LDGDLIETFLDLNRTRMDEI 1046
>gi|225443990|ref|XP_002280735.1| PREDICTED: DNA damage-binding protein 1 isoform 1 [Vitis vinifera]
Length = 1089
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E+ D + ++ ++D D + ++ +I V
Sbjct: 881 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNIFTVRKN 940
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
S+ D + YH+GE R GS + +LP D T+I
Sbjct: 941 SEGATDEERGRLEVVGE--YHLGEFVNRFRHGSLVMRLPDSDV---------GQIPTVIF 989
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP---VGVPKI 418
T+ G I + + ++Y LE +QA L + + G H ++RS N V
Sbjct: 990 GTVNGVIGVIASLPHDQYVFLEKLQANL--RKVIKGVGGLSHEQWRSFNNEKKTVDAKNF 1047
Query: 419 LDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L T+ + +
Sbjct: 1048 LDGDLIETFLDLNRTRMDEI 1067
>gi|430814207|emb|CCJ28534.1| unnamed protein product [Pneumocystis jirovecii]
Length = 904
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 91/451 (20%), Positives = 183/451 (40%), Gaps = 104/451 (23%)
Query: 5 KRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELN------NDTCSSDICCVDPLS-GSVL 57
++L ++ LG P+++ YH + ++ V+ +L+ N+ +S + +D S +L
Sbjct: 518 QQLQIQTIPLGELPRRICYHDKQKVFGVLTIKLSLEASNGNEVQTSYLKILDVTSFDGIL 577
Query: 58 SSFKLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQN 117
SF+LEL E + + V + ++ + VVGT S +P E ES+KGR+I+
Sbjct: 578 DSFQLELNECVQCITSVTIDNQDIFVVGTGFS-----LPE-EEESSKGRIILF------- 624
Query: 118 SDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQL 177
G ++++ F EI D C GI
Sbjct: 625 ------------GVTNKKIWVFSEI--------------QVNDAVYCIGI---------- 648
Query: 178 RLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLT 237
+D +A ++ + + + + A R+ + + L
Sbjct: 649 ------------------IDNKIIAGINALVHIYAY-DSSLKNFNVIATYRSTTLCLSLA 689
Query: 238 AHFTRIAVGDCRDGI--LFYSYHEDARKLEQIY--CDPSQRLVADCV-LMDVDTAVVSDR 292
H T + +GD + L + E+ +L+++ C+P L CV +D D + ++
Sbjct: 690 VHGTHVIIGDLMKSVSLLAFINTENGPRLKEVAKDCNP---LWMTCVAALDNDLYIGAEA 746
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASF 352
+G++++ + + E L GE+ I+ G+ +Y +++++ A+F
Sbjct: 747 EGNLSLFW---KDFNTTFEENKLQIISEIKWGELVNQIKPGTILY---SENSIIIPKATF 800
Query: 353 ESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRS---R 409
T+ GSI I + E E L +Q+ + + + + +HS +R+ R
Sbjct: 801 ---------VTVDGSIGIIFTVKREYLEFLVNLQSNMG--KIISGIGCLNHSNWRAFCNR 849
Query: 410 ENPVGVPK-ILDGDMLSQFLELTSTQQEAVL 439
PK +DGD + F+ L ++ V+
Sbjct: 850 RKKSNEPKCFIDGDFVEIFINLDDDIKQKVI 880
>gi|428164905|gb|EKX33915.1| hypothetical protein GUITHDRAFT_158867 [Guillardia theta CCMP2712]
Length = 1092
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 22/234 (9%)
Query: 228 RTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTA 287
R +++ L I GD I +Y + ++E+I D + + ++D DT
Sbjct: 868 RGHILVLYLQTRGDFIVAGDLMRSISLLTYKQVDGQIEEIARDFNANWMTAVDILDDDTF 927
Query: 288 VVSDRKGSIAVLSCSDRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALG 346
+ ++ G + + + + E L YH+G++ ++GS + +
Sbjct: 928 LGAE--GYFNLFTVRKNTDATSDEERARLEVVGEYHLGDMVNRFQRGSLVLR-------- 977
Query: 347 DCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEF 406
+S + TII T+ G I + +S EEYE L VQ A++ + + G H ++
Sbjct: 978 ---SSDTPTTDTIIFGTVNGMIGVIAVLSKEEYEFLLKVQD--ALNFVIKGVGGLRHEDW 1032
Query: 407 RSRENP----VGVPK-ILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKL 455
RS EN PK +DGD++ FL+L + E V +GS + S K+
Sbjct: 1033 RSFENERTQGARAPKGFIDGDLIESFLDLRREKMEEV-CHAIGSITVEELSRKI 1085
>gi|326497839|dbj|BAJ94782.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1227
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 120/297 (40%), Gaps = 65/297 (21%)
Query: 172 TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRF 231
E L L + T + L++C + R LA G+ +R + +G+ +
Sbjct: 943 NEGKSLELLHKTQVEEVPLSLCQFQGR-LLAGVGSV-------------LRLYDLGKRKL 988
Query: 232 M-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCV 280
+ I+ + + RI VGD ++ + Y D +L D R +
Sbjct: 989 LRKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAAN 1048
Query: 281 LMDVDTAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHM 323
+D DT +D+ G+I SD +E++ + + N PN +H+
Sbjct: 1049 HIDFDTMAGADKFGNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHV 1108
Query: 324 GEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELL 382
G++ ++K S I P G+CL I T++GS+ + +S E+ +
Sbjct: 1109 GDVVTCLQKASLI---PGG---GECL----------IYGTVMGSVGALLAFTSREDVDFF 1152
Query: 383 EAVQARL-AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
++ L HP PL G DH +RS P V ++DGD+ Q+ L + Q +
Sbjct: 1153 SHLEMHLRQEHP---PLCGRDHMAYRSAYFP--VKDVIDGDLCEQYPSLPADMQRKI 1204
>gi|449459948|ref|XP_004147708.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
gi|449513493|ref|XP_004164340.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
Length = 1214
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 119/292 (40%), Gaps = 65/292 (22%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+ + R LA G+ +R + +G+ R +
Sbjct: 935 LELLHKTQVEGVPLALAQFQGR-LLAGLGSV-------------LRLYDLGKRRLLRKCE 980
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ + Y D +L D R + +D D
Sbjct: 981 NKLFPNTIVSIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYHVDFD 1040
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G+I + SD +E++ + + N PN +H+G++
Sbjct: 1041 TMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIIQFHIGDVVT 1100
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSI-VIFIPISSEEYELLEAVQA 387
S++K S I P G+C I+ T++GS+ + S ++ + ++
Sbjct: 1101 SLQKASLI---PGG---GEC----------ILYGTVMGSLGALHAFTSRDDVDFFSHLEM 1144
Query: 388 RL-AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ HP PL G DH +RS P V ++DGD+ QF L Q +
Sbjct: 1145 HMRQEHP---PLCGRDHMGYRSAYFP--VKDVIDGDLCEQFPSLPLDMQRKI 1191
>gi|449017314|dbj|BAM80716.1| similar to splicing factor 3b subunit 3 [Cyanidioschyzon merolae
strain 10D]
Length = 1678
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 103/245 (42%), Gaps = 39/245 (15%)
Query: 175 WQLRLAYSTTWPGMVLAICPYLDRYFLASAGN--AFYV---CGFPNDNPQRVRRFAVGRT 229
W+L L ++P + + + R+ + + GN A Y CG+ P V + A+
Sbjct: 1333 WKLVLTERLSFPESIGDLS-RVGRHLVVAHGNRLALYTHTRCGW---RPLTVSKRALASP 1388
Query: 230 RFMIMLLTAH--FTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTA 287
I+ LTAH RI V GI + Y+ +L + D +R + L+D DT
Sbjct: 1389 ---IVALTAHEALCRIFVASLHHGISLFKYYVQENRLVLVAEDMQRRWIHRLQLLDADTV 1445
Query: 288 VVSDRKGSIAVLSCS-------------DRLED--NASPE------CNLTPNCAYHMGEI 326
V +D+ GSIAVL RL + ASPE L P C+ H+G +
Sbjct: 1446 VAADKFGSIAVLRLPVESSAAIEGDPSYGRLAERYGASPESARSFVARLMPECSVHVGSV 1505
Query: 327 AVSIRKGSFIYKLPAD-DALGDCLASFESSQTTIIASTLLGSIVIFIPISSE-EYELLEA 384
S+ F Y D DA + I+ T+ G + IP + E+++++
Sbjct: 1506 VTSLHV--FGYGAATDPDATPASAPRSWTEAEAILYGTVSGGFGMLIPFRTRAEWDIVQR 1563
Query: 385 VQARL 389
++ L
Sbjct: 1564 LEREL 1568
>gi|68075683|ref|XP_679761.1| splicing factor 3b, subunit 3, 130kD [Plasmodium berghei strain ANKA]
gi|56500578|emb|CAH95367.1| splicing factor 3b, subunit 3, 130kD, putative [Plasmodium berghei]
Length = 1216
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
RI D R+ +L + Y + + I D R + ++D T + +D+ S+ +L
Sbjct: 998 NRIFASDIRESVLIFFYDSNQNVIRLISDDIIPRWITCSEILDHHTIIAADKFDSVFIL- 1056
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFES------ 354
R+ + A E N ++ GE+ S K + + + +G+ + S +
Sbjct: 1057 ---RVPEEAKQEEYGIANKCWYGGEVINSSTKNRKMEHIMSFH-IGEIVTSLQKVKLSPV 1112
Query: 355 SQTTIIASTLLGSIVIFIPI-SSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPV 413
S II ST++G+I FIP + EE EL + ++ L L G +H FRS +P
Sbjct: 1113 SSECIIYSTIMGTIGAFIPYDNKEELELTQHLEIILRTE--KHALCGREHIFFRSYYHP- 1169
Query: 414 GVPKILDGDMLSQFLELTSTQQEAV 438
V ++DGD+ QF L Q +
Sbjct: 1170 -VQHVIDGDLCEQFSSLPFEVQRKI 1193
>gi|357147370|ref|XP_003574320.1| PREDICTED: splicing factor 3B subunit 3-like [Brachypodium
distachyon]
Length = 1228
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 120/296 (40%), Gaps = 65/296 (21%)
Query: 173 ETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM 232
E L L + T + L++C + R LA G+ +R + +G+ + +
Sbjct: 945 EGKSLELLHKTQVEEVPLSLCQFQGR-LLAGVGSV-------------LRLYDLGKRKLL 990
Query: 233 -----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL 281
I+ + + RI VGD ++ + Y D +L D R +
Sbjct: 991 RKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANH 1050
Query: 282 MDVDTAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMG 324
+D DT +D+ G+I SD +E++ + + N PN +H+G
Sbjct: 1051 IDFDTMAGADKFGNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVG 1110
Query: 325 EIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLE 383
++ ++K S I P G+CL I T++GS+ + +S E+ +
Sbjct: 1111 DVVTCLQKASLI---PGG---GECL----------IYGTVMGSVGALLAFTSREDVDFFS 1154
Query: 384 AVQARL-AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
++ L HP PL G DH +RS P V ++DGD+ Q+ L + Q +
Sbjct: 1155 HLEMHLRQEHP---PLCGRDHMAYRSAYFP--VKDVIDGDLCEQYPSLPADMQRKI 1205
>gi|440473070|gb|ELQ41892.1| pre-mRNA-splicing factor rse-1 [Magnaporthe oryzae Y34]
Length = 1229
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI VGD + G+++ +Y + +L D R ++D D+ +D
Sbjct: 988 LIVSLNTQGSRIIVGDVQHGLIYVAYKSETNRLIPFADDTIARWTTCTTMVDYDSTAGAD 1047
Query: 292 RKGSIAVLSCSDRL---EDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
+ G++ +L C ++ D E +L + Y G S R + D C
Sbjct: 1048 KFGNLWILRCPEKASQESDEPGSEVHLVHSRDYLHG---TSNRLALMAHVYTQDIPTSIC 1104
Query: 349 LASF-ESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEF 406
+ Q ++ G+I + IP +S E+ + ++++ L PL G DH +
Sbjct: 1105 KTNLVVGGQEVLLWGGFQGTIGVLIPFVSREDADFFQSLEQHLRSE--DPPLAGRDHLMY 1162
Query: 407 RSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
R P V ++DGD+ ++ L + +++ +
Sbjct: 1163 RGCYVP--VKGVIDGDLCERYTMLPNDKKQMI 1192
>gi|430813298|emb|CCJ29330.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1197
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 16/213 (7%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI + D ++ I F Y +L D R ++D +T D+
Sbjct: 970 IVQLHTQGSRIIIADIQESIHFAVYKYLENRLIVFADDVIPRWTTTSTMLDYETVAAGDK 1029
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASF 352
G+ + C + ++A + P+ A + E + + K+ A +GD S
Sbjct: 1030 FGNFWINRCPLEVSESADED----PSGAQLIHEKSYLFGAAKRL-KMLAHFYIGDTFTSM 1084
Query: 353 ESSQ------TTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSE 405
Q I+ + ++GSI IF+P + E+ + + ++A + L+ L+G DH
Sbjct: 1085 HKVQLIAGGRDIIVYTGMMGSIGIFLPFVGREDVDFFQQLEALMRTEDLS--LIGRDHLM 1142
Query: 406 FRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+R PV ++DGD+ +FL L +++ +
Sbjct: 1143 YRGYYVPV--KSVVDGDLCERFLMLPYNKKQVI 1173
>gi|345563727|gb|EGX46712.1| hypothetical protein AOL_s00097g460 [Arthrobotrys oligospora ATCC
24927]
Length = 1308
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 20/216 (9%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I LT RI V D ++ + + Y + KL D R L+D ++ D
Sbjct: 1080 LITGLTTQNNRIIVSDIQESVTYVVYKQQENKLIPFADDMVPRWTTCTALLDYESVAGGD 1139
Query: 292 RKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIA--------VSIRKGSFIYKLPADD 343
+ G++ V+ R AS E + P+ Y + E + V++ F +P
Sbjct: 1140 KFGNLWVV----RAPPKASEEADEDPSSGYLLHEKSYLQGAPNRVNLMSHFFTQDVPTSI 1195
Query: 344 ALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGND 402
+ +A + ++ S L G+I I +P IS E+ + + ++ + APL G D
Sbjct: 1196 QKVNLVAG---GRDCVVWSGLQGTIGIMVPFISREDVDFFQTLEQHMRTE--DAPLAGRD 1250
Query: 403 HSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
H +RS P V ++DGD+ +F L +++ +
Sbjct: 1251 HLIYRSYYVP--VKGVIDGDLCERFALLPYDKKQMI 1284
>gi|389638952|ref|XP_003717109.1| pre-mRNA-splicing factor RSE1 [Magnaporthe oryzae 70-15]
gi|148887431|sp|Q52E49.2|RSE1_MAGO7 RecName: Full=Pre-mRNA-splicing factor RSE1
gi|351642928|gb|EHA50790.1| pre-mRNA-splicing factor RSE1 [Magnaporthe oryzae 70-15]
Length = 1216
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI VGD + G+++ +Y + +L D R ++D D+ +D
Sbjct: 988 LIVSLNTQGSRIIVGDVQHGLIYVAYKSETNRLIPFADDTIARWTTCTTMVDYDSTAGAD 1047
Query: 292 RKGSIAVLSCSDRL---EDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
+ G++ +L C ++ D E +L + Y G S R + D C
Sbjct: 1048 KFGNLWILRCPEKASQESDEPGSEVHLVHSRDYLHG---TSNRLALMAHVYTQDIPTSIC 1104
Query: 349 LASF-ESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEF 406
+ Q ++ G+I + IP +S E+ + ++++ L PL G DH +
Sbjct: 1105 KTNLVVGGQEVLLWGGFQGTIGVLIPFVSREDADFFQSLEQHLRSE--DPPLAGRDHLMY 1162
Query: 407 RSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
R P V ++DGD+ ++ L + +++ +
Sbjct: 1163 RGCYVP--VKGVIDGDLCERYTMLPNDKKQMI 1192
>gi|440478305|gb|ELQ59147.1| pre-mRNA-splicing factor rse-1 [Magnaporthe oryzae P131]
Length = 1223
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI VGD + G+++ +Y + +L D R ++D D+ +D
Sbjct: 988 LIVSLNTQGSRIIVGDVQHGLIYVAYKSETNRLIPFADDTIARWTTCTTMVDYDSTAGAD 1047
Query: 292 RKGSIAVLSCSDRL---EDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
+ G++ +L C ++ D E +L + Y G S R + D C
Sbjct: 1048 KFGNLWILRCPEKASQESDEPGSEVHLVHSRDYLHG---TSNRLALMAHVYTQDIPTSIC 1104
Query: 349 LASF-ESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEF 406
+ Q ++ G+I + IP +S E+ + ++++ L PL G DH +
Sbjct: 1105 KTNLVVGGQEVLLWGGFQGTIGVLIPFVSREDADFFQSLEQHLRSE--DPPLAGRDHLMY 1162
Query: 407 RSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
R P V ++DGD+ ++ L + +++ +
Sbjct: 1163 RGCYVP--VKGVIDGDLCERYTMLPNDKKQMI 1192
>gi|357132340|ref|XP_003567788.1| PREDICTED: DNA damage-binding protein 1a-like [Brachypodium
distachyon]
Length = 1090
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 13/198 (6%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E++ D + + ++D D V ++ ++ V
Sbjct: 882 IVVGDLMKSISLLVYKHEESAIEELARDYNANWMTAVEMIDDDIYVGAENSYNLFTVRKN 941
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
SD D + YH+GE R GS + +LP D +G T+I
Sbjct: 942 SDAATDEERGRLEVVGE--YHLGEFVNRFRHGSLVMRLP-DTEMGQI--------PTVIF 990
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDH-SEFRSRENPVGVPKILD 420
T+ G I I + ++Y LE +Q+ L L +D F + + LD
Sbjct: 991 GTINGVIGIIASLPHDQYVFLEKLQSILGKFIKGVGSLSHDQWRSFHNEKKTAEARNFLD 1050
Query: 421 GDMLSQFLELTSTQQEAV 438
GD++ FL+L ++ E V
Sbjct: 1051 GDLIESFLDLNRSKMEEV 1068
>gi|50549733|ref|XP_502337.1| YALI0D02717p [Yarrowia lipolytica]
gi|74634908|sp|Q6CAH5.1|RSE1_YARLI RecName: Full=Pre-mRNA-splicing factor RSE1
gi|49648205|emb|CAG80525.1| YALI0D02717p [Yarrowia lipolytica CLIB122]
Length = 1143
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 114/259 (44%), Gaps = 27/259 (10%)
Query: 190 LAICPYLDRYFLASAGNA--FYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF---TRIA 244
LA+C Y + +A G+ Y G Q +R+ + ++ + L AHF R+A
Sbjct: 880 LALCAY-NGLLVAGIGSQVRLYALGLK----QVLRKAQIELSKRVTCL--AHFAGSNRVA 932
Query: 245 VGDCRDGILFYSYHED--ARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
VGD R + E+ + + CD R V +D +T + DR G +L
Sbjct: 933 VGDIRQSVTVCVVLEEDSGHVIYPLVCDKISRQVTCLFFVDYETVALGDRFGGFTML--- 989
Query: 303 DRLEDNASPECNLTPNCAYHMGEIAVSIRK-GSFIYKLPADDALGDCLASFESSQTTIIA 361
R+ AS + N A H+ ++ ++ F + A + D + ++
Sbjct: 990 -RIPSEASKLADEDHN-AVHLRQLEPTLNGPAHFRFDHVASFHIEDVPVAIHMYNDYLVV 1047
Query: 362 STLLGSIVIFIPI-SSEEYELLEAVQARL-AIHPLTAPLLGNDHSEFRSRENPVGVPKIL 419
LLG++ F+P+ S ++ L+ ++ + A P L+G DH FR PV +++
Sbjct: 1048 CGLLGTVSAFVPVVSPKQSRDLKTIEKFVCASDP---GLMGRDHGRFRGYYVPV--KEVV 1102
Query: 420 DGDMLSQFLELTSTQQEAV 438
DGDML + L + ++E V
Sbjct: 1103 DGDMLREVLVMDEKRREEV 1121
>gi|255080490|ref|XP_002503825.1| predicted protein [Micromonas sp. RCC299]
gi|226519092|gb|ACO65083.1| predicted protein [Micromonas sp. RCC299]
Length = 1114
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 22/215 (10%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD + +Y + +E+ D + + ++D DT + ++ ++ L
Sbjct: 902 IVVGDLMKSVSLLAYKPEESVIEERARDYNANWMTAVDILDDDTYLGAENNFNLFTLR-- 959
Query: 303 DRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTII 360
R D A+ E L YH+GE R+GS + +LP + + T++
Sbjct: 960 -RQSDAATDEERSRLEVVGEYHVGEFVNRFRRGSLVMRLPDQE---------NADVPTLL 1009
Query: 361 ASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSREN------PVG 414
T+ G I + + E++E L A+QA A++ + + G H +RS +N G
Sbjct: 1010 FGTVSGVIGVLATLPREQFEFLSALQA--ALNKTVSGVGGLSHDAWRSFQNEHRHRAKDG 1067
Query: 415 VPKILDGDMLSQFLELTSTQQEAVLSFTLGSFDTI 449
+DGD++ FL+L + V + S D +
Sbjct: 1068 ARGFVDGDLIESFLDLRPEKAREVAAAVKLSVDEL 1102
>gi|62318656|dbj|BAD95136.1| UV-damaged DNA-binding protein- like [Arabidopsis thaliana]
Length = 1088
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 19/201 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
IAVGD I Y + +E+ D + +A +++ D + +D +I + +
Sbjct: 880 IAVGDLMKSISLLIYKHEEGAIEERARDYNANWMAAVEILNDDIYLGTDNCFNIFTVKKN 939
Query: 303 DRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTII 360
+ + A+ E + YH+GE R GS + KLP D +G T+I
Sbjct: 940 N---EGATDEERARMEVVGEYHIGEFVNRFRHGSLVMKLP-DSDIGQI--------PTVI 987
Query: 361 ASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPK--- 417
T+ G I + + E+Y LE +Q L + + G H ++RS N +
Sbjct: 988 FGTVSGMIGVIASLPQEQYAFLEKLQTSL--RKVIKGVGGLSHEQWRSFNNEKRTAEAKG 1045
Query: 418 ILDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L+ + E +
Sbjct: 1046 YLDGDLIESFLDLSRGKMEEI 1066
>gi|18377609|gb|AAL66955.1| putative UV-damaged DNA binding factor [Arabidopsis thaliana]
Length = 270
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 17/200 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + ++ ++D D + ++ + +L+
Sbjct: 62 IVVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAE--NNFNLLTVK 119
Query: 303 DRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
E E L YH+GE R GS + +LP D +G T+I
Sbjct: 120 KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP-DSEIGQI--------PTVIF 170
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPK---I 418
T+ G I + + E+Y LE +Q+ ++ + + G H ++RS N +
Sbjct: 171 GTVNGVIGVIASLPQEQYTFLEKLQS--SLRKVIKGVGGLSHEQWRSFNNEKRTAEARNF 228
Query: 419 LDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L+ + E +
Sbjct: 229 LDGDLIESFLDLSRNKMEDI 248
>gi|260947152|ref|XP_002617873.1| hypothetical protein CLUG_01332 [Clavispora lusitaniae ATCC 42720]
gi|238847745|gb|EEQ37209.1| hypothetical protein CLUG_01332 [Clavispora lusitaniae ATCC 42720]
Length = 1242
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 132/333 (39%), Gaps = 72/333 (21%)
Query: 142 IVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQLRLAYSTTWPGMVLAICPYLDRYFL 201
IVG TE L S S + IK + +L + TT ++C + ++ L
Sbjct: 916 IVG-TTENLVYSPHYYSGNSIYTFRIKRNAKKKPELVYLHKTTIEFPPSSLCAFNEK-LL 973
Query: 202 ASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTA-HFTR------------IAVGDC 248
AGN ++R + VGR + + T F R I V D
Sbjct: 974 VGAGN-------------QLRLYDVGRKQLLRKTSTKIDFLRRINKIQHIAGDVIVVCDS 1020
Query: 249 RDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAV----LSCSDR 304
+ + F + + + D ++R + ++D T + DR G+I V + +++
Sbjct: 1021 SESVSFMRFDQTKNQFIAFCNDTAKRQITALEVLDSRTVIAGDRFGNIFVSRIPKNVAEQ 1080
Query: 305 LEDN----------ASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFES 354
LE+N + L C ++ +I S+ KGSF+
Sbjct: 1081 LENNVLMKFEEETLGASSSRLDKLCDFYTQDIVTSLHKGSFVV----------------G 1124
Query: 355 SQTTIIASTLLGSIVIFIPI-SSEEYELLEAVQARLAIH-----------PLTAPLLGND 402
+II + L G++ I +P+ +++E +LL ++ L + L+G +
Sbjct: 1125 GSESIIYTGLQGTVGILLPLATTQEVDLLMKLENSLRDYFNDSFDDFDNTKQGFNLVGRE 1184
Query: 403 HSEFRSRENPVGVPKILDGDMLSQFLELTSTQQ 435
H +FR NP V ++DGD + +F EL + Q
Sbjct: 1185 HLKFRGYYNP--VENVIDGDFIERFFELNPSAQ 1215
>gi|413948669|gb|AFW81318.1| hypothetical protein ZEAMMB73_456332 [Zea mays]
Length = 674
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 99/237 (41%), Gaps = 33/237 (13%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E+ D + + ++D + V ++ ++ V
Sbjct: 466 IVVGDLMKSISLLVYKHEESAIEERARDYNANWMTAVEMLDDEVYVGAENGYNLFTVRKN 525
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
SD D+ + + YH+GE R GS + +LP D +G T+I
Sbjct: 526 SDAATDDERAKLEVVGE--YHLGEFVNRFRHGSLVMRLP-DSEIGKI--------PTVIF 574
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGN-DHSEFRSRENPVGVPK--- 417
T+ G I I + + Y LE Q+ L + +GN H ++RS N +
Sbjct: 575 GTINGVIGIIASLPHDHYTFLEKFQSTLVKY---IKGVGNMSHEQWRSFHNDKKTAEARN 631
Query: 418 ILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLERVH 474
LDGD++ FL+L+ ++ E V SK S ++++V+ L R+H
Sbjct: 632 FLDGDLIESFLDLSRSKMEVV--------------SKAMGVSVEDLSKIVEELTRLH 674
>gi|255712143|ref|XP_002552354.1| KLTH0C02904p [Lachancea thermotolerans]
gi|238933733|emb|CAR21916.1| KLTH0C02904p [Lachancea thermotolerans CBS 6340]
Length = 1288
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 110/270 (40%), Gaps = 61/270 (22%)
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL- 299
+R+AVGD + + + Y + A + I D ++R V +D T V DR G+I VL
Sbjct: 1017 SRVAVGDIHESVTLFLYDKRADRFISIADDITKRHVTALEFLDRSTVVGGDRFGNIWVLR 1076
Query: 300 --SCSDRLEDNASP------ECNLTPNCAYHMGEIAVSIRKGSFIYKLPADD---ALGDC 348
S +RL + P N+ + A ++ E K + A+D +L
Sbjct: 1077 LPSIHERLVSDEFPFFLSKFHNNVNNSIAKNIMECPF---KWDLVNHFYANDIPVSLNVV 1133
Query: 349 LASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLA----------------- 390
S + +I+ L GS+ +P+++ +E E LE +Q L+
Sbjct: 1134 KNMHSSDKVSILYLGLQGSVGCLLPLATKKEAEFLEKLQGGLSEADEAFYMDFEAQKASE 1193
Query: 391 ------------------IHPLTAP-------LLGNDHSEFRSRENPVGVPKILDGDMLS 425
H P L+G DH+ +RS P V K++DGD+
Sbjct: 1194 ESEHTDDWSMDYNQGTKLKHKSPRPIVEGAFSLVGRDHTVYRSYYAP--VRKVIDGDLCE 1251
Query: 426 QFLELTSTQQEAVLSFTLGSFDTIKASSKL 455
QF +L ++QE L+ LG D S+L
Sbjct: 1252 QFYQLYPSEQE-FLTKKLGFKDVAFVKSRL 1280
>gi|189208368|ref|XP_001940517.1| pre-mRNA-splicing factor rse1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976610|gb|EDU43236.1| pre-mRNA-splicing factor rse1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1247
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 103/233 (44%), Gaps = 40/233 (17%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDAR--KLEQIYCDPSQRLVADCVLMDVDTAVVS 290
I+ + +R+ V D + ++ + + +L D R + ++D DT +
Sbjct: 1015 IVDIKTQGSRLVVSDQAQSVTYFVHKDQVHPNRLIPFVDDSVARHTSASEMLDYDTTIGG 1074
Query: 291 DRKGSIAVLSCSDRLEDNA--SPE----------CNLTPN-----CAYHMGEIAVSIRKG 333
D+ G+I ++ C + +++ SP+ TPN Y +I VSI+K
Sbjct: 1075 DKFGNIWLVRCPKEISESSDESPDGSDLLVDKSYLGGTPNRLDLIAHYFTNDIPVSIQKA 1134
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE-YELLEAVQARLAIH 392
+ I + GD + I + L G++ IP +S ++L + Q L +
Sbjct: 1135 NLI-------SGGDKV---------IFWAGLQGTLGALIPFTSRRTHKLFQ--QLELTLR 1176
Query: 393 PLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGS 445
PL G DH +RS PV ++DGD++ ++L L+S ++E++ GS
Sbjct: 1177 SEDKPLSGRDHLTYRSYYAPV--KSVIDGDLIERYLVLSSDKRESIAGQMTGS 1227
>gi|449664009|ref|XP_004205855.1| PREDICTED: splicing factor 3B subunit 3-like [Hydra magnipapillata]
Length = 1213
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 42/217 (19%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI----- 296
RI V D +D F Y +L D ++R + L+D DT +D+ G+I
Sbjct: 995 RIMVHDIQDSFHFLKYKRKDNQLVLFADDVNKRFLTCGCLVDYDTMAGADKFGNIFFVRL 1054
Query: 297 -------------AVLSCSDR-LEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPAD 342
V + DR L + AS + ++ YH+GE A+S++K + I
Sbjct: 1055 PADVKDDIEEDPTGVKALWDRGLLNGASQKADVV--SVYHIGETALSLQKATLI------ 1106
Query: 343 DALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGN 401
+++ +T+ G I + +P +S E+ + + ++ + + + PL G
Sbjct: 1107 ----------PGGSESLVYTTVSGGIGMLVPFTSREDIDFFQHLE--MHMRQDSPPLCGR 1154
Query: 402 DHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
DH FRS + V +DGD+ QF L +++A+
Sbjct: 1155 DHLWFRSSFS--SVKNCVDGDLCEQFNSLEYAKRKAI 1189
>gi|357478269|ref|XP_003609420.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355510475|gb|AES91617.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 1225
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 117/291 (40%), Gaps = 63/291 (21%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+C + R LA G +R + +G+ R +
Sbjct: 946 LELLHKTQVEGVPLALCQFQGR-LLAGIGPV-------------LRLYDLGKRRLLRKCE 991
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + A+ RI VG ++ + Y D +L D R + +D D
Sbjct: 992 NKSFPSSIVSIHAYRDRIYVGGIQESFHYCKYRRDENQLYIFADDSVPRWLTSSYHIDFD 1051
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G+I SD +E++ + + N PN +H+G++
Sbjct: 1052 TMAGADKFGNIFFARLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVIT 1111
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSI-VIFIPISSEEYELLEAVQA 387
S++K S + P G+C I+ T++GS+ + S ++ + ++
Sbjct: 1112 SLQKASLV---PGG---GEC----------IVYGTVMGSVGALHAFTSRDDVDFFSHLE- 1154
Query: 388 RLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ + PL G DH +RS P V ++DGD+ QF L Q +
Sbjct: 1155 -MHMRQDNPPLCGRDHMAYRSAYFP--VKDVIDGDLCEQFPTLPMDLQRKI 1202
>gi|429859776|gb|ELA34542.1| pre-mRNA-splicing factor rse1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1212
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 12/209 (5%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L+ +RI VGD + G+ + Y KL D R V ++D ++ D
Sbjct: 984 LIVSLSTQGSRIVVGDVQHGVTYVVYKPTTNKLIPFVDDTIARWVTCTTMVDYESVAGGD 1043
Query: 292 RKGSIAVLSCSDRLEDNASPECN----LTPNCAYHMGEIAVSIRKGSFIYKLPADDALGD 347
+ G++ ++ C ++ A E L H +++ S+ +P
Sbjct: 1044 KFGNMFLVRCPEKASQEADEEQAGLHLLNTRDYLHGAPHRLNLLSHSYTQDVPTSITKTS 1103
Query: 348 CLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEF 406
+ Q ++ S + G+I +FIP ++ E+ + + ++ + APL G DH +
Sbjct: 1104 LVVG---GQDVLLWSGINGTIGVFIPFVTREDVDFFQNLEQHMRTE--DAPLAGRDHLMY 1158
Query: 407 RSRENPVGVPKILDGDMLSQFLELTSTQQ 435
R P V ++DGD+ ++ L + ++
Sbjct: 1159 RGYYVP--VKGVIDGDLCERYTLLPNDKK 1185
>gi|260819268|ref|XP_002604959.1| hypothetical protein BRAFLDRAFT_92599 [Branchiostoma floridae]
gi|229290288|gb|EEN60969.1| hypothetical protein BRAFLDRAFT_92599 [Branchiostoma floridae]
Length = 163
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 23/122 (18%)
Query: 319 CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-E 377
C YH+GE+ S++K + I +++ +T+ G + I +P +S E
Sbjct: 39 CNYHVGEVVTSVQKATLI----------------PGGSESLVYTTISGGVGILVPFTSHE 82
Query: 378 EYELLEAVQARL-AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQE 436
+++ + ++ + + HP PL G DH FRS P V ++DGD+ QF + ++Q+
Sbjct: 83 DHDFFQHLEMHIRSEHP---PLCGRDHLSFRSYYYP--VKNVIDGDLCEQFNSMEPSKQK 137
Query: 437 AV 438
+V
Sbjct: 138 SV 139
>gi|384500266|gb|EIE90757.1| hypothetical protein RO3G_15468 [Rhizopus delemar RA 99-880]
Length = 1057
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 115/270 (42%), Gaps = 25/270 (9%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
+LRL GM+ + P ++ LAS Y+ + + QR+ + + R +
Sbjct: 779 KLRLISQLKTGGMIDCVRP-IEGKLLASIQGTLYLYRWQS---QRLVKVSSRRLPSVTRC 834
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGS 295
+T H I GD ++ + Y + +L ++ + V +D + + ++R+G
Sbjct: 835 MTTHENFIMTGDLAYSVVMFQYDRQSDQLLEVAAHEKTKEVLAMKAIDSNLVIGAEREGH 894
Query: 296 IAVLS-CSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFES 354
+ VL C D + ++ E L +H+G++ R GS + +
Sbjct: 895 LFVLEHCQDEV---SADEPLLDVISTWHLGDVVSRFRFGSL--------GMNNVDPDSSP 943
Query: 355 SQTTIIASTLLGSIVIFIPISSEEYELLEAVQARL-----AIHPLTAPLLGNDHSEFRSR 409
++I +T G+I + +S E Y+LL +Q + I L+ N + +R
Sbjct: 944 IAPSLIFATASGAIGVIADLSPERYKLLYQMQCNMCRVVKGIGELSHTDWRNVNIMYRKE 1003
Query: 410 ENPVGVPKILDGDMLSQFLELTSTQQEAVL 439
E +DGD++ FL+L+S Q + V+
Sbjct: 1004 E----AMNFIDGDLIESFLDLSSQQMQNVV 1029
>gi|405970223|gb|EKC35151.1| Splicing factor 3B subunit 3 [Crassostrea gigas]
Length = 1217
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 94/219 (42%), Gaps = 44/219 (20%)
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL- 299
RI D +D F Y +L D + R + +D +T +D+ G+I ++
Sbjct: 998 NRIIASDVQDSFHFVRYKRQENQLIVFADDTNPRWITASCSLDYNTVAGADKFGNITIIR 1057
Query: 300 ---SCSDRLEDN---------------ASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPA 341
SD ++++ AS + ++ N +H+GE+ S++K + I
Sbjct: 1058 LPGDVSDDVDEDPTGNKALWDRGLLNGASQKADVMMN--FHLGEMVTSLQKATLI----- 1110
Query: 342 DDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAI-HPLTAPLL 399
+++ +TL G I + + +S E+++ + ++ + HP PL
Sbjct: 1111 -----------PGGSESLVYTTLSGGIGMLVAFTSHEDHDFFQHLEMYMRTEHP---PLC 1156
Query: 400 GNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FRS P V ++DGD+ F + +Q++V
Sbjct: 1157 GRDHLSFRSYYYP--VKNVIDGDLCEMFNSMDPVKQKSV 1193
>gi|110741229|dbj|BAF02165.1| UV-damaged DNA binding factor - like protein [Arabidopsis thaliana]
Length = 727
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 17/200 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + ++ ++D D + ++ + +L+
Sbjct: 519 IVVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN--NFNLLTVK 576
Query: 303 DRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
E E L YH+GE R GS + +LP D +G T+I
Sbjct: 577 KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP-DSEIGQI--------PTVIF 627
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPK---I 418
T+ G I + + E+Y LE +Q+ L + + G H ++RS N +
Sbjct: 628 GTVNGVIGVIASLPQEQYTFLEKLQSSL--RKVIKGVGGLSHEQWRSFNNEKRTAEARNF 685
Query: 419 LDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L+ + E +
Sbjct: 686 LDGDLIESFLDLSRNKMEDI 705
>gi|302837243|ref|XP_002950181.1| UV-damaged DNA binding complex subunit 1 protein [Volvox carteri f.
nagariensis]
gi|300264654|gb|EFJ48849.1| UV-damaged DNA binding complex subunit 1 protein [Volvox carteri f.
nagariensis]
Length = 1104
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 170/443 (38%), Gaps = 101/443 (22%)
Query: 5 KRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCS-SDICCVDPLSGSVLSSFKLE 63
++L+VR LG P+++ +H +R+L V+ L++D S + +D + V++S+ L
Sbjct: 746 QKLHVRAVPLGENPRRIAHHEGARMLGVLTMRLDSDGSERSFLRLLDDTTFDVVASYALA 805
Query: 64 LGET--------GKSMELVRVGH-EQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEH 114
GE G S VG +VGT+ I+P E E TKGR++VL EH
Sbjct: 806 PGEMPCSLAAWPGSSNGTAAVGALNACFLVGTAF-----IVPE-EPEPTKGRILVL--EH 857
Query: 115 MQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCD--GIKLEET 172
++ + + ++ PF + +S+ S + CD G+++E
Sbjct: 858 VR------LVTEKEVKGAAYNVLPF-------VKDKILASVNSKVPASGCDLGGVRVE-- 902
Query: 173 ETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM 232
LA ++ G +LA+ +LA+ GN
Sbjct: 903 ------LASECSYLGNILAL-------YLATRGNL------------------------- 924
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
+ VGD + SY+ + LE D + +D DT + D
Sbjct: 925 ----------VVVGDLMRSVSLLSYNVEQGVLEHRAADYNSGWTTSVEALDDDTYLEGDN 974
Query: 293 KGSIAVLSCSDRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLA 350
++ VL R D+A+ E L YH G R GS + + P +
Sbjct: 975 HLNLVVLR---RNADSATDEERARLQVVGEYHTGTFVNRFRHGSLVMRPPDSE------- 1024
Query: 351 SFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHS---EFR 407
F S ++ G + + + YE+L +Q+ A+ + + G H F
Sbjct: 1025 -FVSLPVPLLFGGTDGRLGVIARLPPGLYEMLTKLQS--ALRQVVRGVGGLSHEAWIAFS 1081
Query: 408 SRENPVGVPKILDGDMLSQFLEL 430
+ +DGD++ FL+L
Sbjct: 1082 NERRTADAKGFVDGDLIETFLDL 1104
>gi|412993390|emb|CCO16923.1| predicted protein [Bathycoccus prasinos]
Length = 1273
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 242 RIAVGDCRDGILFYSY-HEDARKLE-QIYCDP-SQRLVADCVLMDVDTAVVSDRKGSIAV 298
R V D + F Y ED ++ I+ D + R V + +D DT VSD+ G+ A
Sbjct: 1048 RFFVTDACESAFFVKYVREDDQECSMHIFADDIAPRYVTSMLPLDRDTVAVSDKFGNFAA 1107
Query: 299 L----SCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADD---ALGDCLAS 351
L SD +E + S + + +G + + K + D +L C
Sbjct: 1108 LRLPKDVSDEIESDISGGKHAALTSSAALGALNGANNKLQACAQFHVGDVICSLTKCALQ 1167
Query: 352 FESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRE 410
S+ I+ +TL G++ F+P +S +E + ++ L I P+LGN+H FRS
Sbjct: 1168 TGGSE-VIVYATLGGALGAFVPFASKDEADFCTHLEMHLRIE--APPVLGNEHGAFRSSY 1224
Query: 411 NPVGVPKILDGDMLSQFLELTSTQQEAV 438
PV ++DGD+ QF L + Q +
Sbjct: 1225 FPVKA--VVDGDLCEQFGRLGADAQRRI 1250
>gi|413946716|gb|AFW79365.1| hypothetical protein ZEAMMB73_562969 [Zea mays]
Length = 1089
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E+ D + + ++D + V ++ ++ V
Sbjct: 881 IVVGDLMKSISLLVYKHEESAIEERARDYNANWMTAVEMLDDEVYVGAENSYNLFTVRKN 940
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
SD D+ + YH+GE R GS + +LP D +G T+I
Sbjct: 941 SDAATDDERARLEVVGE--YHLGEFVNRFRHGSLVMRLP-DSDIGQI--------PTVIF 989
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGN-DHSEFRSRENPVGVPK--- 417
T+ G I I + ++Y LE +Q+ L + +GN H ++RS N +
Sbjct: 990 GTINGVIGIIASLPHDQYIFLEKLQSTLVKY---IKGVGNLSHEQWRSFHNDKKTAEARN 1046
Query: 418 ILDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L+ ++ E V
Sbjct: 1047 FLDGDLIESFLDLSRSKMEEV 1067
>gi|226510488|ref|NP_001145925.1| uncharacterized protein LOC100279448 [Zea mays]
gi|219884971|gb|ACL52860.1| unknown [Zea mays]
Length = 416
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E+ D + + ++D + V ++ ++ V
Sbjct: 208 IVVGDLMKSISLLVYKHEESAIEERARDYNANWMTAVEMLDDEVYVGAENSYNLFTVRKN 267
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
SD D+ + YH+GE R GS + +LP D +G T+I
Sbjct: 268 SDAATDDERARLEVVGE--YHLGEFVNRFRHGSLVMRLP-DSDIGQI--------PTVIF 316
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGN-DHSEFRSRENPVGVPK--- 417
T+ G I I + ++Y LE +Q+ L + +GN H ++RS N +
Sbjct: 317 GTINGVIGIIASLPHDQYIFLEKLQSTLVKY---IKGVGNLSHEQWRSFHNDKKTAEARN 373
Query: 418 ILDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L+ ++ E V
Sbjct: 374 FLDGDLIESFLDLSRSKMEEV 394
>gi|224061051|ref|XP_002300334.1| predicted protein [Populus trichocarpa]
gi|222847592|gb|EEE85139.1| predicted protein [Populus trichocarpa]
Length = 1088
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 17/200 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E+ D + ++ ++D D + ++ ++ V
Sbjct: 880 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN 939
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
S+ D + YH+GE R GS + +LP D T+I
Sbjct: 940 SEGATDEERGRLEVVGE--YHLGEFVNRFRHGSLVMRLPDSDV---------GQIPTVIF 988
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP---VGVPKI 418
T+ G I + + E+Y LE +Q+ L + + G H ++RS N V
Sbjct: 989 GTVNGVIGVIASLPHEQYLFLEKLQSNL--RKVIKGVGGLSHEQWRSFNNEKKTVDAKNF 1046
Query: 419 LDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L+ ++ + +
Sbjct: 1047 LDGDLIESFLDLSRSRMDEI 1066
>gi|340367933|ref|XP_003382507.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Amphimedon
queenslandica]
Length = 1214
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 121/297 (40%), Gaps = 55/297 (18%)
Query: 163 SCDGIKLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVR 222
S DG KLE T QL + +A+ P+ R L G + + + +R
Sbjct: 928 SPDGSKLEHVHTTQL--------DDVPIAMAPFQGR-LLVGVGKLLRI--YDIGKKKMLR 976
Query: 223 RFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLM 282
+ ++++ + R+ VGD ++ + F Y +L + R ++
Sbjct: 977 KCENKHLPYLVVDIKVMGRRVYVGDVQEAVHFLYYRPHENQLVIFADEVVPRFCTTSCIL 1036
Query: 283 DVDTAVVSDRKGSIAVL----SCSDRLEDNASPECNLTPN-------------CAYHMGE 325
D +T +D+ G+I +L +D+++++ S +L +YH+GE
Sbjct: 1037 DYNTVASADKFGNITILRLPSDVTDQVDEDPSGSRSLWDRGFLNGATQKANVMTSYHVGE 1096
Query: 326 IAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE----YEL 381
++ K S I ++ +TL GSI I +P SS+E ++
Sbjct: 1097 GINTLHKVSLI----------------PGGSEVLVYTTLSGSIGILVPFSSKEDSDFFQH 1140
Query: 382 LEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
LE + + + L+G DH FRS P V ++DGD+ + L +++ +
Sbjct: 1141 LE-----MHMRSEWSNLVGRDHLSFRSYYVP--VKSVIDGDLCEVYNSLDPSKRREI 1190
>gi|291000406|ref|XP_002682770.1| predicted protein [Naegleria gruberi]
gi|284096398|gb|EFC50026.1| predicted protein [Naegleria gruberi]
Length = 1216
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 85/206 (41%), Gaps = 39/206 (18%)
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAV-- 298
RI VGD + F ++ L + + R + L+D +T D+ G+ +
Sbjct: 996 NRIFVGDITESFHFVKFNSSENSLTIFADNTTPRWLTASALVDHNTIAGGDKFGNFFISR 1055
Query: 299 --LSCSDRLED---------------NASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPA 341
SD LED N +P+ T +++G + SI K S I P+
Sbjct: 1056 LPSDVSDELEDSSTGKEKWIWERGLLNGAPQ-KATEIVKFYVGSMITSIYKTSLIAGGPS 1114
Query: 342 DDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGN 401
+I +T+ G++ +F P +S++ ++ Q + + PL G
Sbjct: 1115 ----------------ILIYTTITGAVGVFFPFTSKK-DIEFFTQLEMHLREKNPPLCGR 1157
Query: 402 DHSEFRSRENPVGVPKILDGDMLSQF 427
DH +RS P V ++DGD++ QF
Sbjct: 1158 DHLAYRSYYFP--VKSVVDGDLIEQF 1181
>gi|209875989|ref|XP_002139437.1| spliceosomal protein SAP 130 [Cryptosporidium muris RN66]
gi|209555043|gb|EEA05088.1| spliceosomal protein SAP 130, putative [Cryptosporidium muris RN66]
Length = 1300
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 35/215 (16%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQR-LVADCVLMDVDTAVVSDRKGSIAV-- 298
RI GD R G++ + YH +L I D R L + C ++D T + SD+ ++ V
Sbjct: 1084 RIFAGDIRHGVIIFKYHSVQNRLSIIANDIMPRWLTSACEILDYHTVITSDKFDNLIVCR 1143
Query: 299 ----LSCSDRLEDNASPECN---------LTPNCAYHMGEIAVSIRKGSFIYKLPADDAL 345
S + N + + N + P +H+G++ I K L
Sbjct: 1144 VPTEASSNYDFTSNFNSQTNTSSYMKPYQINPVAHFHVGDLVTCIHKNQL-------SPL 1196
Query: 346 GDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSE 405
G T+I T+LGSI PI++++ ++ + L + + L+ DH
Sbjct: 1197 G---------VETLIFGTILGSIGTLTPITNKD-DVDLLCKLELLLRNESPSLMSRDHLM 1246
Query: 406 FRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLS 440
FRS P V ++DGD+ F +S Q + S
Sbjct: 1247 FRSYYAP--VLNVIDGDLCETFTSYSSDVQARIAS 1279
>gi|186511557|ref|NP_001118940.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
gi|332657118|gb|AEE82518.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
Length = 1067
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 17/200 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + ++ ++D D + ++ + +L+
Sbjct: 859 IVVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN--NFNLLTVK 916
Query: 303 DRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
E E L YH+GE R GS + +LP D +G T+I
Sbjct: 917 KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP-DSEIGQI--------PTVIF 967
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPK---I 418
T+ G I + + E+Y LE +Q+ L + + G H ++RS N +
Sbjct: 968 GTVNGVIGVIASLPQEQYTFLEKLQSSL--RKVIKGVGGLSHEQWRSFNNEKRTAEARNF 1025
Query: 419 LDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L+ + E +
Sbjct: 1026 LDGDLIESFLDLSRNKMEDI 1045
>gi|330932624|ref|XP_003303845.1| hypothetical protein PTT_16226 [Pyrenophora teres f. teres 0-1]
gi|311319874|gb|EFQ88052.1| hypothetical protein PTT_16226 [Pyrenophora teres f. teres 0-1]
Length = 1247
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 100/233 (42%), Gaps = 40/233 (17%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDAR--KLEQIYCDPSQRLVADCVLMDVDTAVVS 290
I+ + +R+ V D + ++ + + +L D R + ++D DT +
Sbjct: 1015 IVDIKTQGSRLVVSDQAQSVTYFVHKDQVHPNRLIPFVDDSISRHTSASEMLDYDTTIGG 1074
Query: 291 DRKGSIAVLSCSDRLEDNA--SPE----------CNLTPN-----CAYHMGEIAVSIRKG 333
D+ G+I ++ C + +++ SP+ TPN Y +I VSI+K
Sbjct: 1075 DKFGNIWLVRCPKEISESSDESPDGSDLLVDKSYLGGTPNRLDLIAHYFTNDIPVSIQKA 1134
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE-YELLEAVQARLAIH 392
+ I I + L G++ IP +S ++L + Q L++
Sbjct: 1135 NLI----------------SGGDKVIFWAGLQGTLGALIPFTSRRNHKLFQ--QLELSLR 1176
Query: 393 PLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGS 445
PL G DH +RS PV ++DGD++ ++L L+ ++E++ + GS
Sbjct: 1177 SEDKPLSGRDHLTYRSYYAPV--KSVIDGDLIERYLVLSRDKRESIAAQMTGS 1227
>gi|297799958|ref|XP_002867863.1| hypothetical protein ARALYDRAFT_492777 [Arabidopsis lyrata subsp.
lyrata]
gi|297313699|gb|EFH44122.1| hypothetical protein ARALYDRAFT_492777 [Arabidopsis lyrata subsp.
lyrata]
Length = 1088
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 19/201 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + +A ++D D + +D ++ + +
Sbjct: 880 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMAAVEILDDDIYLGADNCFNLFTVKKN 939
Query: 303 DRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTII 360
+ + A+ E + YH+GE R GS + +LP D +G T+I
Sbjct: 940 N---EGATDEERARMEVVGEYHIGEFVNRFRHGSLVMRLP-DSEIGQI--------PTVI 987
Query: 361 ASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP---VGVPK 417
T+ G I + + E+Y LE +Q L + + G H ++RS N
Sbjct: 988 FGTVSGMIGVIASLPQEQYAFLEKLQTSL--RKVIKGVGGLSHEQWRSFNNEKRTAEAKS 1045
Query: 418 ILDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L+ + E +
Sbjct: 1046 YLDGDLIESFLDLSRGKMEEI 1066
>gi|357519461|ref|XP_003630019.1| DNA damage-binding protein [Medicago truncatula]
gi|355524041|gb|AET04495.1| DNA damage-binding protein [Medicago truncatula]
Length = 1171
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 17/200 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + ++ ++D D + ++ S + +
Sbjct: 963 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDVYLGAEN--SFNLFTVR 1020
Query: 303 DRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
E E L YH+GE R GS + +LP D T+I
Sbjct: 1021 KNSEGATDEERGRLEVAGEYHLGEFINRFRHGSLVMRLPDSDV---------GQIPTVIF 1071
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP---VGVPKI 418
T+ G I + + E+Y LE +Q+ L + + G H ++RS N V
Sbjct: 1072 GTINGVIGVIASLPHEQYVFLEKLQSNL--RKVIKGVGGLSHEQWRSFNNEKKTVEARNF 1129
Query: 419 LDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L ++ + +
Sbjct: 1130 LDGDLIESFLDLKRSKMDEI 1149
>gi|15235577|ref|NP_192451.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
gi|55976605|sp|Q9M0V3.1|DDB1A_ARATH RecName: Full=DNA damage-binding protein 1a; AltName: Full=UV-damaged
DNA-binding protein 1a; Short=DDB1a
gi|7267302|emb|CAB81084.1| UV-damaged DNA binding factor-like protein [Arabidopsis thaliana]
gi|25054828|gb|AAN71904.1| putative UV-damaged DNA binding factor [Arabidopsis thaliana]
gi|332657117|gb|AEE82517.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
Length = 1088
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 17/200 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + ++ ++D D + ++ + +L+
Sbjct: 880 IVVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN--NFNLLTVK 937
Query: 303 DRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
E E L YH+GE R GS + +LP D +G T+I
Sbjct: 938 KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP-DSEIGQI--------PTVIF 988
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPK---I 418
T+ G I + + E+Y LE +Q+ L + + G H ++RS N +
Sbjct: 989 GTVNGVIGVIASLPQEQYTFLEKLQSSL--RKVIKGVGGLSHEQWRSFNNEKRTAEARNF 1046
Query: 419 LDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L+ + E +
Sbjct: 1047 LDGDLIESFLDLSRNKMEDI 1066
>gi|331238007|ref|XP_003331659.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309310649|gb|EFP87240.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1213
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 90/230 (39%), Gaps = 46/230 (20%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L+ +RI VGD +D + + Y +L D R ++D DT DR
Sbjct: 986 IISLSVQGSRILVGDSQDSVSYAVYKPAENRLIVFADDVVPRWTTCATMVDYDTVAGGDR 1045
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPNCA---------------------YHMGEIAVSIR 331
G++ V RL N S E + P A +H+ +I SI+
Sbjct: 1046 FGNLWV----SRLPKNVSDEVDEDPTGAGIMHEKGYLMGAPHKLKNLVHFHLNDIPTSIQ 1101
Query: 332 KGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLA 390
K S + + ++ + + GSI I +P IS E+ + + ++ +
Sbjct: 1102 KTSLV----------------PGGREVLLYTGVQGSIGILVPFISKEDVDFFQTLEMHMR 1145
Query: 391 IHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLS 440
L+G DH +R P V +DGD+ F L S +Q V S
Sbjct: 1146 NE--MPSLVGRDHLAYRGYYFP--VKNCVDGDLCESFALLPSAKQLQVAS 1191
>gi|331221690|ref|XP_003323519.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309302509|gb|EFP79100.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1213
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 91/230 (39%), Gaps = 46/230 (20%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L+ +RI VGD +D + + Y +L D R ++D DT DR
Sbjct: 986 IISLSVQGSRILVGDSQDSVSYAVYKPAENRLIVFADDVVPRWTTCATMVDYDTVAGGDR 1045
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPNCA---------------------YHMGEIAVSIR 331
G++ V RL N S E + P A +H+ +I SI+
Sbjct: 1046 FGNLWV----SRLPKNVSDEVDEDPTGAGIMHEKGYLMGAPHKLKNLVHFHLNDIPTSIQ 1101
Query: 332 KGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLA 390
K S + + ++ + + GSI I +P IS E+ + + ++ +
Sbjct: 1102 KTSLV----------------PGGREVLLYTGVQGSIGILVPFISKEDVDFFQTLE--MH 1143
Query: 391 IHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLS 440
+ L+G DH +R P V +DGD+ F L S +Q V S
Sbjct: 1144 MRNEMPSLVGRDHLAYRGYYFP--VKNCVDGDLCESFALLPSAKQLQVAS 1191
>gi|15233515|ref|NP_193842.1| DNA damage-binding protein 1b [Arabidopsis thaliana]
gi|73620956|sp|O49552.2|DDB1B_ARATH RecName: Full=DNA damage-binding protein 1b; AltName: Full=UV-damaged
DNA-binding protein 1b; Short=DDB1b
gi|110739453|dbj|BAF01636.1| UV-damaged DNA-binding protein- like [Arabidopsis thaliana]
gi|332659001|gb|AEE84401.1| DNA damage-binding protein 1b [Arabidopsis thaliana]
Length = 1088
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
IAVGD I Y + +E+ D + + +++ D + +D +I + +
Sbjct: 880 IAVGDLMKSISLLIYKHEEGAIEERARDYNANWMTAVEILNDDIYLGTDNCFNIFTVKKN 939
Query: 303 DRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTII 360
+ + A+ E + YH+GE R GS + KLP D +G T+I
Sbjct: 940 N---EGATDEERARMEVVGEYHIGEFVNRFRHGSLVMKLP-DSDIGQI--------PTVI 987
Query: 361 ASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPK--- 417
T+ G I + + E+Y LE +Q L + + G H ++RS N +
Sbjct: 988 FGTVSGMIGVIASLPQEQYAFLEKLQTSL--RKVIKGVGGLSHEQWRSFNNEKRTAEAKG 1045
Query: 418 ILDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L+ + E +
Sbjct: 1046 YLDGDLIESFLDLSRGKMEEI 1066
>gi|389740093|gb|EIM81285.1| hypothetical protein STEHIDRAFT_86633 [Stereum hirsutum FP-91666 SS1]
Length = 1213
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 91/228 (39%), Gaps = 46/228 (20%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI VGD ++ I + Y KL D R V ++D T DR
Sbjct: 985 IISLNTQGSRIIVGDMQESIAYAVYKAPENKLLVFADDTQARWVTCSTMVDYTTVAAGDR 1044
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPNCA---------------------YHMGEIAVSIR 331
G+I + +RL+ S + + P A +H+G++ SI
Sbjct: 1045 FGNIFI----NRLDSKVSDQVDDDPTGAGILHEKGILMGAPHKTAMLAHFHVGDLVTSIH 1100
Query: 332 KGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLA 390
K S + + ++ + L G+I + +P +S E+ + + ++ +
Sbjct: 1101 KVSLV----------------AGGREVLLYTGLHGTIGMLVPLVSKEDVDFISTLEQHIR 1144
Query: 391 IHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ L+G DH +R PV ++DGD+ F L + +Q +
Sbjct: 1145 TEQTS--LVGRDHLAWRGYYVPVKA--VVDGDLCETFARLPAAKQSMI 1188
>gi|406868052|gb|EKD21089.1| pre-mRNA-splicing factor rse1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1236
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 95/212 (44%), Gaps = 12/212 (5%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI V D ++ I+ Y KL D R + ++D +T D
Sbjct: 984 LIVGLQTQGSRIVVSDVQESIIMIVYKFQENKLIPFVDDTISRWTSCTTMVDYETVAGGD 1043
Query: 292 RKGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMGEI-AVSIRKGSFIYKLPADDALGD 347
+ G++ +L C + + A E +L +Y G +++ F +P +
Sbjct: 1044 KFGNLWLLRCPTKASEEADEEGSASHLVHERSYLQGSPHRLTLMAHFFTQDIPMSIQKTN 1103
Query: 348 CLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEF 406
+A + I+ S + G++ I IP +S E+ + + ++ L APL G DH +
Sbjct: 1104 LVAG---GRDCILWSGIQGTLGILIPFVSREDVDFFQTLEQHLRSE--DAPLAGRDHLIY 1158
Query: 407 RSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
RS P V ++DGD+ ++ L + +++ +
Sbjct: 1159 RSYYVP--VKGVIDGDLCERYTLLPTDKKQMI 1188
>gi|322700233|gb|EFY91989.1| Pre-mRNA-splicing factor rse-1 [Metarhizium acridum CQMa 102]
Length = 1039
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 91/215 (42%), Gaps = 20/215 (9%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L + RI VGD + G+ Y+ + KL D R + D ++ D+
Sbjct: 812 IVSLQSQGFRIVVGDVQHGVTMVVYNPVSNKLLPFVDDTIARWTTCLAMADYESVAGGDK 871
Query: 293 KGSIAVLSCSDRLE---DNASPECNLTPNCAY-HMGEIAVSIRKGSFIYKLPADDALGDC 348
G+I ++ C D+ D + L+ +Y H + + F+ +P C
Sbjct: 872 FGNIWIVRCPDKASAEADEPGSDVQLSNGQSYLHGAAHRLQLMAHMFVQDIPT----SIC 927
Query: 349 LASF-ESSQTTIIASTLLGSIVIFIPISSEE----YELLEAVQARLAIHPLTAPLLGNDH 403
S Q ++ S L G+I + IP+ + E ++ LE + + PL G DH
Sbjct: 928 KTSLVVGGQDVLLWSGLQGTIGVLIPLVTRETADFFQTLE-----MHMRNEDPPLAGRDH 982
Query: 404 SEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+R P V ++DGD+ +F L+ +++ +
Sbjct: 983 LMYRGYHVP--VKGVIDGDLCERFSLLSREKKQMI 1015
>gi|297809743|ref|XP_002872755.1| UV-damaged DNA-binding protein 1A [Arabidopsis lyrata subsp. lyrata]
gi|297318592|gb|EFH49014.1| UV-damaged DNA-binding protein 1A [Arabidopsis lyrata subsp. lyrata]
Length = 1088
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + ++ ++D D + ++ ++ +
Sbjct: 880 IVVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLVTVK-- 937
Query: 303 DRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTII 360
+ + A+ E L YH+GE R GS + +LP D +G T+I
Sbjct: 938 -KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP-DSEIGQI--------PTVI 987
Query: 361 ASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPK--- 417
T+ G I + + E+Y LE +Q+ L + + G H ++RS N +
Sbjct: 988 FGTVNGVIGVIASLPQEQYTFLEKLQSSL--RKVIKGVGGLSHEQWRSFNNEKRTAEARN 1045
Query: 418 ILDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L+ + E +
Sbjct: 1046 FLDGDLIESFLDLSRNKMEDI 1066
>gi|312283457|dbj|BAJ34594.1| unnamed protein product [Thellungiella halophila]
Length = 1088
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 17/200 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + ++ ++D D + ++ + +L+
Sbjct: 880 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN--NFNLLTVK 937
Query: 303 DRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
E E L YH+GE R GS + +LP D +G T+I
Sbjct: 938 KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP-DSEIGQI--------PTVIF 988
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPK---I 418
T+ G I + + E+Y LE +Q+ L + + G H ++RS N +
Sbjct: 989 GTVNGVIGVIASLPQEQYMFLEKLQSSL--RKVIKGVGGLSHEQWRSFNNEKRTAEARNF 1046
Query: 419 LDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L+ + E +
Sbjct: 1047 LDGDLIESFLDLSRNKMEDI 1066
>gi|2911067|emb|CAA17529.1| UV-damaged DNA-binding protein-like [Arabidopsis thaliana]
gi|7268907|emb|CAB79110.1| UV-damaged DNA-binding protein-like [Arabidopsis thaliana]
Length = 1102
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 19/201 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
IAVGD I Y + +E+ D + + +++ D + +D +I + +
Sbjct: 894 IAVGDLMKSISLLIYKHEEGAIEERARDYNANWMTAVEILNDDIYLGTDNCFNIFTVKKN 953
Query: 303 DRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTII 360
+ + A+ E + YH+GE R GS + KLP D T+I
Sbjct: 954 N---EGATDEERARMEVVGEYHIGEFVNRFRHGSLVMKLPDSDI---------GQIPTVI 1001
Query: 361 ASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPK--- 417
T+ G I + + E+Y LE +Q L + + G H ++RS N +
Sbjct: 1002 FGTVSGMIGVIASLPQEQYAFLEKLQTSL--RKVIKGVGGLSHEQWRSFNNEKRTAEAKG 1059
Query: 418 ILDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L+ + E +
Sbjct: 1060 YLDGDLIESFLDLSRGKMEEI 1080
>gi|168066745|ref|XP_001785293.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663100|gb|EDQ49884.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1090
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 100/237 (42%), Gaps = 19/237 (8%)
Query: 207 AFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQ 266
A Y +D + ++ + + + + + I VGD I Y + +E+
Sbjct: 846 ALYKWTLRDDGTRELQYESSHHGHILALYVQSRGDFIVVGDLMKSISLLIYKPEEGAIEE 905
Query: 267 IYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPE--CNLTPNCAYHMG 324
D + + ++D DT + ++ ++ + ++ D A+ E L YH+G
Sbjct: 906 RARDYNANWMTAVEILDDDTYLGAENSFNLFTVRKNN---DAATDEERGRLEVVGEYHLG 962
Query: 325 EIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEA 384
E R GS + +LP +A S T+I T+ G I + + +++ L+
Sbjct: 963 EFVNRFRHGSLVMRLPDSEA---------SQIPTVIFGTVNGVIGVIASLPQDQFLFLQK 1013
Query: 385 VQARLAIHPLTAPLLGNDHSEFRSRENP---VGVPKILDGDMLSQFLELTSTQQEAV 438
+Q A+ + + G H ++RS N V LDGD++ FL+L+ + E +
Sbjct: 1014 LQQ--ALVKVIKGVGGLSHEQWRSFSNERKTVDARNFLDGDLIESFLDLSRNKMEEI 1068
>gi|443694993|gb|ELT96001.1| hypothetical protein CAPTEDRAFT_155561 [Capitella teleta]
Length = 1215
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 98/235 (41%), Gaps = 49/235 (20%)
Query: 229 TRFMIMLLTA---HFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
+F+ +TA + RI V D +D F Y +L D R + ++D +
Sbjct: 981 NKFLPNFVTAIHVNGNRIMVSDIQDSFHFVRYKRHENQLIVFADDTCPRWLTCSCMLDYN 1040
Query: 286 TAVVSDRKGSIAVLSCSDRLEDNASPECNLTPN---------------------CAYHMG 324
T +D+ G+I V+ RL NA+ + + P +H+G
Sbjct: 1041 TMAGADKFGNICVV----RLPSNATDDVDEDPTGNKALWDRGSLNGASQKADSIANFHVG 1096
Query: 325 EIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLE 383
E+ S++K + I +++ +TL GS+ + +P SS E+++ +
Sbjct: 1097 EMITSLQKATLI----------------PGGSESLVYTTLSGSLGMLVPFSSHEDHDFFQ 1140
Query: 384 AVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
++ + + L G DH +RS P V ++DGD+ F + ++Q+ +
Sbjct: 1141 HLE--MHMRSEVQSLCGRDHLAYRSYYFP--VRNVIDGDLCEMFTSMDVSRQKQI 1191
>gi|281202916|gb|EFA77118.1| G-protein-coupled receptor family protein [Polysphondylium pallidum
PN500]
Length = 1820
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 99/232 (42%), Gaps = 31/232 (13%)
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARK----LEQIYCDPSQRLVADCVLMDVDTAVVSD 291
L RI VG G+ Y Y + L ++ + L + C+ + D V+ D
Sbjct: 1097 LAYQNNRIMVGTQNTGLKVYRYTQSLNNQPDTLGKLKYQQTPMLTSSCLFLSPDEYVIVD 1156
Query: 292 RKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIA-VSIRKGSFIYKLPADDALGDCLA 350
G+I+VL DN+ P N N + IA SI++ C
Sbjct: 1157 IFGNISVL------HDNSDPS-NEDRNTT--LDTIANFSIKES--------------CTK 1193
Query: 351 SFESSQTTIIASTLLGSIVIFIPIS-SEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSR 409
+I LG + + I+ +++Y+LL +Q RL LTAPLL NDH +RS
Sbjct: 1194 LHRIDNNRLIVGGGLGGVHMISKINNTKDYDLLLELQRRLCEFKLTAPLLSNDHLCYRSE 1253
Query: 410 ENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPI 461
+ + +LDG+ML+QFL L Q +L T +A + ++PI
Sbjct: 1254 MS--MMRNVLDGEMLAQFLCLPEDCQIRILKNISRKIITYRACNTFNNTNPI 1303
>gi|389609725|dbj|BAM18474.1| spliceosomal protein sap [Papilio xuthus]
Length = 367
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 221 VRRFAVGRTRFMIMLLTAHF-----------TRIAVGDCRDGILFYSYHEDARKLEQIYC 269
+R + +GR + + H RI V D ++ + Y + +L
Sbjct: 158 LRMYDIGRRKLLRKCENRHIPNLIADIKTIGQRIFVADVQESVFCVKYKKRENQLIIFAD 217
Query: 270 DPSQRLVADCVLMDVDTAVVSDRKGSIAVL----SCSDRLEDNASPECNLTP----NCAY 321
D + R + + ++D DT +SD+ G+++V+ S SD ++++ + L N A
Sbjct: 218 DTNPRWITNTCVLDYDTVAMSDKFGNVSVMRLPHSVSDDVDEDPTGNKALWDRGLLNGAS 277
Query: 322 HMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYE 380
GEI V+ G + L + ++ +T+ G++ + +P +S E+++
Sbjct: 278 QKGEIVVNFHVGETVASLQRATLI-------PGGSEALLYATISGALGVLLPFTSREDHD 330
Query: 381 LLEAVQARLAIHPLTAPLLGNDHSEFRSRENPV 413
+ ++ + + +PL G DH FRS PV
Sbjct: 331 FFQHLE--MHMRSENSPLCGRDHLSFRSYYYPV 361
>gi|356525401|ref|XP_003531313.1| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Glycine max]
Length = 1089
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 17/200 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + ++ ++D D + ++ S + +
Sbjct: 881 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIVDDDIYLGAEN--SFNLFTVR 938
Query: 303 DRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
E E L YH+GE R GS + +LP D T+I
Sbjct: 939 KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV---------GQIPTVIF 989
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP---VGVPKI 418
T+ G I + + E+Y LE +Q+ L + + G H ++RS N V
Sbjct: 990 GTINGVIGVIASLPHEQYVFLEKLQSNL--RKVIKGVGGLSHEQWRSFNNEKKTVEARNF 1047
Query: 419 LDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L ++ + +
Sbjct: 1048 LDGDLIESFLDLNRSKMDEI 1067
>gi|356512638|ref|XP_003525025.1| PREDICTED: DNA damage-binding protein 1a-like isoform 2 [Glycine max]
Length = 1068
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 17/200 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + ++ ++D D + ++ S + +
Sbjct: 860 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIVDDDIYLGAEN--SFNLFTVR 917
Query: 303 DRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
E E L YH+GE R GS + +LP D T+I
Sbjct: 918 KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV---------GQIPTVIF 968
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP---VGVPKI 418
T+ G I + + E+Y LE +Q+ L + + G H ++RS N V
Sbjct: 969 GTINGVIGVIASLPHEQYVFLEKLQSNL--RKVIKGVGGLSHEQWRSFNNEKKTVEARNF 1026
Query: 419 LDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L ++ + +
Sbjct: 1027 LDGDLIESFLDLNRSKMDEI 1046
>gi|356525403|ref|XP_003531314.1| PREDICTED: DNA damage-binding protein 1-like isoform 2 [Glycine max]
Length = 1068
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 17/200 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + ++ ++D D + ++ S + +
Sbjct: 860 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIVDDDIYLGAEN--SFNLFTVR 917
Query: 303 DRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
E E L YH+GE R GS + +LP D T+I
Sbjct: 918 KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV---------GQIPTVIF 968
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP---VGVPKI 418
T+ G I + + E+Y LE +Q+ L + + G H ++RS N V
Sbjct: 969 GTINGVIGVIASLPHEQYVFLEKLQSNL--RKVIKGVGGLSHEQWRSFNNEKKTVEARNF 1026
Query: 419 LDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L ++ + +
Sbjct: 1027 LDGDLIESFLDLNRSKMDEI 1046
>gi|356512636|ref|XP_003525024.1| PREDICTED: DNA damage-binding protein 1a-like isoform 1 [Glycine max]
Length = 1089
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 17/200 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + ++ ++D D + ++ S + +
Sbjct: 881 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIVDDDIYLGAEN--SFNLFTVR 938
Query: 303 DRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
E E L YH+GE R GS + +LP D T+I
Sbjct: 939 KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV---------GQIPTVIF 989
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP---VGVPKI 418
T+ G I + + E+Y LE +Q+ L + + G H ++RS N V
Sbjct: 990 GTINGVIGVIASLPHEQYVFLEKLQSNL--RKVIKGVGGLSHEQWRSFNNEKKTVEARNF 1047
Query: 419 LDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L ++ + +
Sbjct: 1048 LDGDLIESFLDLNRSKMDEI 1067
>gi|328770638|gb|EGF80679.1| hypothetical protein BATDEDRAFT_11194 [Batrachochytrium dendrobatidis
JAM81]
Length = 1098
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 105/239 (43%), Gaps = 26/239 (10%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I V D I + L+++ D + L+D DT + +D +I LS
Sbjct: 879 ILVADLIKSITLLQFDLATDSLKELAYDADSNWMTAAELIDDDTFLGADSSMNIFALS-- 936
Query: 303 DRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTII 360
+ D S E L P +H GE+ RKGS L A D A E I+
Sbjct: 937 -KQGDQVSEEERQRLRPKGWFHTGELINRFRKGSL--TLHATDETLALPAIPE-----IL 988
Query: 361 ASTLLGSIVIFIPISSEEY-ELLEAVQARL-AIHPLTAPLLGNDHSEFRSRENPVGVPKI 418
T+ G+I + I S+E ++L +Q L ++ L+ +D +R+ + I
Sbjct: 989 YCTVHGAIGVVARIPSDETAKILSTLQEALKSVVQGVGGLIHSDWRRYRTERRSIKSAGI 1048
Query: 419 LDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLE---RVH 474
+DGD++ FLEL + Q+ V + + ++++ S+P+ + + +++E R+H
Sbjct: 1049 IDGDLIESFLELDRSMQDHVFT---------QVATQVAGSTPVTLETLTKMVEDLTRIH 1098
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 17/121 (14%)
Query: 5 KRLNVRKFHLGGTPKKVLYHSESR----LLIVMRTELNNDTCSSDICCVDPLSGS---VL 57
++L+++ LG TP+++ YH S L + R N D +DI C+ L G VL
Sbjct: 701 QKLHIKTIKLGETPRRIAYHDVSHTFGVLTVFSRNLPNGDL--ADISCLRLLDGQGYEVL 758
Query: 58 SSFKLELGETGKSMELVRVGHEQVL--VVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHM 115
S +L+ E S+ +R + L VGT + P E E +GR++V + M
Sbjct: 759 DSIELQPFEIASSLITIRFTDDDTLYYTVGTGFA-----FPH-EDEPVRGRILVFKVNDM 812
Query: 116 Q 116
+
Sbjct: 813 R 813
>gi|388582014|gb|EIM22320.1| hypothetical protein WALSEDRAFT_60013 [Wallemia sebi CBS 633.66]
Length = 1208
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 117/281 (41%), Gaps = 33/281 (11%)
Query: 172 TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRV---RRFAVGR 228
T+ QL L + T + AI + R LA G A + R + FA G
Sbjct: 923 TQDSQLELLHKTDIDDVPYAIHAFKGR-LLAGVGKALRLYDLGKKRLLRKCENKSFAAG- 980
Query: 229 TRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAV 288
I+ L +RI VGD ++ + F Y +L D R +D DT
Sbjct: 981 ----IVNLNVVGSRIYVGDMQESVSFAVYKAPENRLLVFADDIMSRWTTTATPVDYDTVA 1036
Query: 289 VSDRKGSIAVL----SCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDA 344
D+ G+I + S S+ ++++ S L YH G S KL A
Sbjct: 1037 GGDKFGNIFITRVDKSTSEWVDEDESGGGLLHARGLYH-GAPNRS--------KLLAHFY 1087
Query: 345 LGDCLASFESSQTT------IIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAP 397
+GD + S SQ + ++ + L G++ + IP +S ++ E + ++ L + +
Sbjct: 1088 VGDIVTSITKSQLSAGGRDVLVYTCLHGTVGMIIPFASKDDIEFMSTLE--LHMRQESPS 1145
Query: 398 LLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
L+G DH FRS P +DGD+ + L T+Q+A+
Sbjct: 1146 LVGRDHLGFRSYYIPCKA--FVDGDLCELYASLPVTKQQAI 1184
>gi|357478323|ref|XP_003609447.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355510502|gb|AES91644.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 1225
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 112/283 (39%), Gaps = 47/283 (16%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+C + R LA G +R + +G+ R +
Sbjct: 946 LELLHKTQVEGVPLALCQFQGR-LLAGIGPV-------------LRLYDLGKRRLLRKCE 991
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + A+ RI VGD ++ + Y D +L D R + +D D
Sbjct: 992 NKSFPISIVSIHAYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYHIDFD 1051
Query: 286 TAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCA---YHMGEIAVSIRKGSFIYKLPAD 342
T +D+ G+I RL + S E P + G++ ++ K I +
Sbjct: 1052 TMAGADKFGNIFFA----RLPQDVSDEVEEDPTSGKIKWEQGKLNGALNKVEEIVQF--- 1104
Query: 343 DALGDCLASFESSQTT------IIASTLLGSI-VIFIPISSEEYELLEAVQARLAIHPLT 395
+GD + S + + I+ T++G + + S ++ + ++ + +
Sbjct: 1105 -HVGDVITSLQKAALVPGGGECIVYGTVMGCVGALHAFTSRDDVDFFSHLE--MHMRQDN 1161
Query: 396 APLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
PL G DH +RS P V +LDGD+ QF L Q +
Sbjct: 1162 PPLCGRDHMAYRSAYFP--VKDVLDGDLCEQFPTLPMDLQRKI 1202
>gi|254572247|ref|XP_002493233.1| Protein involved in pre-mRNA splicing [Komagataella pastoris GS115]
gi|238033031|emb|CAY71054.1| Protein involved in pre-mRNA splicing [Komagataella pastoris GS115]
gi|328352752|emb|CCA39150.1| Pre-mRNA-splicing factor rse1 [Komagataella pastoris CBS 7435]
Length = 1179
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 90/208 (43%), Gaps = 30/208 (14%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
RI + D + +F S++ + + + D +QR + ++D T V DR G+I+VL C
Sbjct: 962 RIVISDMKQSSMFLSFNAEENRFISLCDDITQRHITCSKMLDYSTVVTGDRFGTISVLRC 1021
Query: 302 SDRLE----DNASPECNLTPNC--------AYHMGEIAVSIRKGSFIYKLPADDALGDCL 349
+++ D + + C +Y++ ++ S+ +GS
Sbjct: 1022 PEKVNKDHLDYIEAKSKMIGECPFKLKQLASYYVQDVVTSLSRGSLTV------------ 1069
Query: 350 ASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRS 408
+ +II + L G+I I PI + + + +++ L L + L S +
Sbjct: 1070 ----GGKQSIIYTGLQGTIGILSPIQTPSDIDFFVSLEDSLRQELLKSKHLLTGRSHLKY 1125
Query: 409 RENPVGVPKILDGDMLSQFLEL-TSTQQ 435
R V ++DGD++ F +L ST+Q
Sbjct: 1126 RGYYVPAQGVVDGDLIQYFYQLPDSTKQ 1153
>gi|169599248|ref|XP_001793047.1| hypothetical protein SNOG_02443 [Phaeosphaeria nodorum SN15]
gi|160704565|gb|EAT90655.2| hypothetical protein SNOG_02443 [Phaeosphaeria nodorum SN15]
Length = 1246
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 102/234 (43%), Gaps = 42/234 (17%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDA---RKLEQIYCDPSQRLVADCVLMDVDTAVV 289
I+ L +R+ V D + Y H+D ++ D QR ++D DT V
Sbjct: 1014 IVDLKTQGSRLVVSDSVQSVT-YVVHKDQIHPNRMIPFIDDTIQRHTTCTEMLDYDTTVG 1072
Query: 290 SDRKGSIAVLSCSDRLEDNA--SPECN---------------LTPNCAYHMGEIAVSIRK 332
D+ G++ ++ C ++ +++ SP+ + L Y +I +SI+K
Sbjct: 1073 GDKFGNLWLVRCPQKVSESSDESPDGSDILVDKSYLGGTANRLDSVAHYFANDIPISIQK 1132
Query: 333 GSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSE-EYELLEAVQARLAI 391
+ ++ I + L G++ IP +S ++++ + Q L +
Sbjct: 1133 THLL----------------SGAERIIFWAGLQGTLGALIPFNSRRQHKMFQ--QLELQL 1174
Query: 392 HPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGS 445
P+ G DH FRS NPV ++DGD++ +FL L+ ++E+++ G+
Sbjct: 1175 RSDDKPMSGRDHLAFRSYFNPV--KSVIDGDLIERFLVLSRDKRESIVGQLTGA 1226
>gi|255571318|ref|XP_002526608.1| DNA repair protein xp-E, putative [Ricinus communis]
gi|223534048|gb|EEF35767.1| DNA repair protein xp-E, putative [Ricinus communis]
Length = 1033
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E+ D + ++ ++D D + ++ ++ V
Sbjct: 825 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN 884
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
S+ D + YH+GE R GS + +LP D T+I
Sbjct: 885 SEGATDEERGRLEVVGE--YHLGEFVNRFRHGSLVMRLPDSDV---------GQIPTVIF 933
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP---VGVPKI 418
T+ G I + + E+Y LE +Q+ L + + G H ++RS N V
Sbjct: 934 GTVNGVIGVIASLPHEQYIFLEKLQSNL--RRVIKGVGGLSHEQWRSFNNEKKTVEAKNF 991
Query: 419 LDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L+ + + +
Sbjct: 992 LDGDLIESFLDLSRNRMDEI 1011
>gi|145549784|ref|XP_001460571.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428401|emb|CAK93174.1| unnamed protein product [Paramecium tetraurelia]
Length = 1178
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 110/280 (39%), Gaps = 41/280 (14%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLL 236
L+L +ST + A+ + R L AG V + N + +++ + I +
Sbjct: 899 LKLKHSTPIDEIPYALAAWRGR-LLVGAGCNLRV--YEMGNQRILKKAEIKNLNSFITSI 955
Query: 237 TAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI 296
RI V + D I Y+ + ++ D R V ++D T + D+ +I
Sbjct: 956 MVKEDRIYVAEVADSIHLLRYNIRDQTFMELADDILPRYVTASTVLDYHTVIAGDKFENI 1015
Query: 297 AV----LSCSDRLED--------------NASPECNLTPNCAYHMGEIAVSIRKGSFIYK 338
V L + E+ N +P + C +++GE+ S++K
Sbjct: 1016 FVSRVPLDIDEEQEEHPYEYKMKMDQGCMNGAP-FKMDQICNFYVGEVITSLQK------ 1068
Query: 339 LPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPL 398
+A +S ++ T +GSI P ++E ++ + + + PL
Sbjct: 1069 ----------IALVSTSSEVVVYGTSMGSIAALYPFDNKE-DIDFFLHLEMYLRVEHQPL 1117
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH +FRS P I+DGD+ QF + +Q AV
Sbjct: 1118 SGRDHMQFRSAYGP--CKSIIDGDLCDQFGNMQYNKQRAV 1155
>gi|391335522|ref|XP_003742140.1| PREDICTED: DNA damage-binding protein 1-like [Metaseiulus
occidentalis]
Length = 1154
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 17/200 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD + +Y+ D LE+I D ++D DT + ++ ++ V
Sbjct: 936 ILVGDLMRSMTLLNYNADITSLEEIGRDYQTNWTTAVEILDEDTFLAAESNLNLYVCKRD 995
Query: 303 DRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIAS 362
D+ ++ YH+GE+ I KGS + P D L + +
Sbjct: 996 PSAADDTRQ--HMHEVALYHLGEMVNVIVKGSLVMAQPGDMPL--------PLNKSFLYG 1045
Query: 363 TLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGN-DHSEFRS--RENPVG-VPKI 418
+L G++ + +PI E Y +L +Q LA T +G +H +R+ E +
Sbjct: 1046 SLHGAVGVIVPIKQELYAILNQIQTNLA---KTIKSVGKIEHGFWRTFLAERKIEPATGF 1102
Query: 419 LDGDMLSQFLELTSTQQEAV 438
+DGD++ Q L+L E+V
Sbjct: 1103 IDGDLIEQLLDLPKEALESV 1122
>gi|300176205|emb|CBK23516.2| unnamed protein product [Blastocystis hominis]
Length = 702
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 95/208 (45%), Gaps = 15/208 (7%)
Query: 243 IAVGDCRDGILFYSYHED---ARKLEQIYCDPSQRLVADCVLMD-----VDTAVVSDRKG 294
IA+GD ++ Y + R+L Q+ C S+R D ++ VV D G
Sbjct: 447 IALGDILYSVVVYKLVLEVVRGRQLAQLECIASERRRRDVTALERLPEAQSEMVVGDAYG 506
Query: 295 SIAVLSCSDRLE-DNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE 353
++ V+ + + D ++P+ + ++H+ + ++ +++ A+D + A
Sbjct: 507 NLMVMQVVEEADLDRSNPQKIVVTKESFHLDD-QINRFVPVQLFRSGAEDKKKEKRAEES 565
Query: 354 SSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPV 413
+ +T+ G I + ++ E+ +L A++ A+ + P+ G DH ++R P
Sbjct: 566 EIAFNLAFATVSGRIGMIGALNDREFRMLRAIET--AMENVITPVGGLDHKQWRCSNTPF 623
Query: 414 GVPKI---LDGDMLSQFLELTSTQQEAV 438
G+ + +DGD++ FLEL Q +
Sbjct: 624 GIKNLAYCIDGDLVEMFLELDDESQAKI 651
>gi|384253371|gb|EIE26846.1| hypothetical protein COCSUDRAFT_52476 [Coccomyxa subellipsoidea
C-169]
Length = 1205
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 119/273 (43%), Gaps = 25/273 (9%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
QL L + T G+ A+ + R LA G + + + +R+ + I
Sbjct: 925 QLELIHKTPTGGIPGALAAFKGR-LLAGVGPTLRI--YEAGKKKLLRKCEHRKLPTHIAT 981
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGS 295
L RI VGD ++ + ++ Y + L + D + R + + +D DT +D+ +
Sbjct: 982 LATSGDRIFVGDLQESMHYFRYKANENALYEYADDIAPRHLTAALPLDYDTVAGADKFCN 1041
Query: 296 IAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLP--ADDALGDCLASFE 353
I V RL + S + P G A + G+ +KL + +GD + S +
Sbjct: 1042 IFVT----RLPRDVSTQVEEDPTGGKFAG--AAGLLNGA-PHKLEDVVNFHVGDLVTSLQ 1094
Query: 354 SS------QTTIIASTLLGSIVIFIPI-SSEEYELLEAVQARL-AIHPLTAPLLGNDHSE 405
+ + ++ +T++G+I +P S E+ + ++ L HP P+ G DH
Sbjct: 1095 RAVLQPGGREVLLYATVMGAIGAMLPFPSREDVDFFSHLEMHLRQEHP---PMGGRDHMS 1151
Query: 406 FRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+R P V ++DGD+ F +L + +Q+++
Sbjct: 1152 YRGSYFP--VKDVIDGDLCEHFSQLPAAKQKSI 1182
>gi|302308830|ref|NP_985929.2| AFR382Wp [Ashbya gossypii ATCC 10895]
gi|442570014|sp|Q753D4.2|RSE1_ASHGO RecName: Full=Pre-mRNA-splicing factor RSE1
gi|299790815|gb|AAS53753.2| AFR382Wp [Ashbya gossypii ATCC 10895]
Length = 1288
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 123/324 (37%), Gaps = 65/324 (20%)
Query: 168 KLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDN--PQRVRRFA 225
K ++L + T + A+CP+ D+ L NA + G + +
Sbjct: 947 KAANNRRFELLALHDTVAGSTIHAMCPFHDK-LLVPLANAVVLYGLGKKQLLKKSISYLP 1005
Query: 226 VGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
T+ ++ L + TR+AVGD + + + E + + D ++R V +D
Sbjct: 1006 TSITK-IVALDQWNGTRVAVGDIHESVTLLHFDERKNQFIPVADDVTKRHVTVVKFVDEC 1064
Query: 286 TAVVSDRKGSIAVLSCS---DRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPAD 342
T + DR G+I +L DRL LT N I +IR+ F ++L
Sbjct: 1065 TVIGGDRFGNIWLLRLPLEYDRLIKEGVDSYLLTLNTG-----IPSNIRECVFKWQLLNH 1119
Query: 343 DALGDCLASFE-------SSQTTIIASTLLGSIVIFIPISS----EEYELLE-------- 383
+ D SF + + +I+ + L G+I IP+ + E ++LLE
Sbjct: 1120 FYINDIPMSFHLIASPQMADRASILYAGLQGTIGYLIPLITRREIEFFDLLEQAMRDADH 1179
Query: 384 --------------------------------AVQARLAIHPLTAPLLGNDHSEFRSREN 411
+VQ + I L+G D +RS N
Sbjct: 1180 LFYLDQENRLNDTSELNDGADEEGSVIDRRFPSVQKKRKIPEGAYSLVGRDAMMYRSYYN 1239
Query: 412 PVGVPKILDGDMLSQFLELTSTQQ 435
P V + DGD+ QFLEL +++
Sbjct: 1240 P--VRHVTDGDLCEQFLELYPSEK 1261
>gi|357528934|sp|Q5B1X8.2|RSE1_EMENI RecName: Full=Pre-mRNA-splicing factor rse1
gi|259485100|tpe|CBF81885.1| TPA: Pre-mRNA-splicing factor rse1
[Source:UniProtKB/Swiss-Prot;Acc:Q5B1X8] [Aspergillus
nidulans FGSC A4]
Length = 1209
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 982 IVGLQTQGSRIVVSDVRESVTYVVYKYQDNVLIPFVDDSIARWTTAATMVDYETTAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMG-----EIAVSIRKGSFIYKLPADDA 344
G++ ++ C + + A E +L + Y G E+ + + F +P
Sbjct: 1042 FGNLWLVRCPKKASEEADEEGSGAHLIHDRGYLQGTPNRLELMIHV----FTQDIPTSLH 1097
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDH 403
+A + ++ + G+I I +P +S E+ + ++++ +LA PL G DH
Sbjct: 1098 KTQLVAG---GRDILVWTGFQGTIGILVPFVSREDVDFFQSLEMQLASQ--CPPLAGRDH 1152
Query: 404 SEFRSRENPVGVPKILDGDMLSQFLELTS 432
+RS P V ++DGD+ Q+ L++
Sbjct: 1153 LIYRSYYAP--VKGVIDGDLCEQYFLLSN 1179
>gi|374095609|gb|AEY85032.1| spliceosomal-like protein [Camellia sinensis]
Length = 1212
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 118/291 (40%), Gaps = 63/291 (21%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T + LA+C + + LA G+ +R + +G+ + +
Sbjct: 933 LELLHKTQVDDVPLALCQFQGK-LLAGVGSV-------------LRLYDLGKRKLLRKCE 978
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I + + RI VGD ++ + Y D +L D R + +D D
Sbjct: 979 NKLFPNTITSIHTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASYHIDFD 1038
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G+I + SD +E++ + + N PN +H+G++
Sbjct: 1039 TMAGADKFGNIYFVRLAQDVSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVT 1098
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQA 387
++K S I P+ G+C +I T++GS+ + +S ++ + ++
Sbjct: 1099 CLQKASLI---PSG---GEC----------VIYGTVMGSLGALLAFTSRDDVDFFSHLE- 1141
Query: 388 RLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ + PL G DH +RS P V ++DGD+ QF L Q +
Sbjct: 1142 -MHMRQENPPLCGRDHMAYRSAYFP--VKDVIDGDLCEQFPTLPMDMQRKI 1189
>gi|67538564|ref|XP_663056.1| hypothetical protein AN5452.2 [Aspergillus nidulans FGSC A4]
gi|40743422|gb|EAA62612.1| hypothetical protein AN5452.2 [Aspergillus nidulans FGSC A4]
Length = 1226
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 982 IVGLQTQGSRIVVSDVRESVTYVVYKYQDNVLIPFVDDSIARWTTAATMVDYETTAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMG-----EIAVSIRKGSFIYKLPADDA 344
G++ ++ C + + A E +L + Y G E+ + + F +P
Sbjct: 1042 FGNLWLVRCPKKASEEADEEGSGAHLIHDRGYLQGTPNRLELMIHV----FTQDIPTSLH 1097
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDH 403
+A + ++ + G+I I +P +S E+ + ++++ +LA PL G DH
Sbjct: 1098 KTQLVAG---GRDILVWTGFQGTIGILVPFVSREDVDFFQSLEMQLASQ--CPPLAGRDH 1152
Query: 404 SEFRSRENPVGVPKILDGDMLSQFLELTS 432
+RS P V ++DGD+ Q+ L++
Sbjct: 1153 LIYRSYYAP--VKGVIDGDLCEQYFLLSN 1179
>gi|398407593|ref|XP_003855262.1| hypothetical protein MYCGRDRAFT_69118 [Zymoseptoria tritici IPO323]
gi|339475146|gb|EGP90238.1| hypothetical protein MYCGRDRAFT_69118 [Zymoseptoria tritici IPO323]
Length = 1218
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 110/268 (41%), Gaps = 25/268 (9%)
Query: 173 ETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNP-QRVRRFAVGRTRF 231
E +L + T + + A+C + R L GN ++ + ++ R AV
Sbjct: 934 EGTKLEFVHRTQFDSPIYALCKFNGRLALG-VGNELFIYDMGMKHLLRKARGTAVPN--- 989
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I +T+ R+ D + + + Y +L D QR L+D +T +D
Sbjct: 990 LITHITSVGNRLICADVSESVTYVVYKPAFNRLIPFVDDTIQRWTTATALVDYETVAGAD 1049
Query: 292 RKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIA--------VSIRKGSFIYKLPADD 343
+ G++ V+ C + S E + Y M E + + +R F +P
Sbjct: 1050 KFGNLWVVRCPE----ATSTEADEDGAGGYIMNERSYLGGAPYRLELRSHFFANDIPTSL 1105
Query: 344 ALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGND 402
+A I S L G++ + +P +S E+ E A+++++ PL G D
Sbjct: 1106 QRTSLVAG---GAEVIFWSGLQGTLGMLVPFVSREDVEFFTALESQMRQE--DPPLAGRD 1160
Query: 403 HSEFRSRENPVGVPKILDGDMLSQFLEL 430
H +RS P V ++DGD+ ++L L
Sbjct: 1161 HLMYRSYYVP--VKGVIDGDLCERYLGL 1186
>gi|168047617|ref|XP_001776266.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672361|gb|EDQ58899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1089
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 19/201 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + +E+ D + + ++D DT + ++ ++ + +
Sbjct: 881 IVVGDLMKSISLLIYKPEEGAIEERARDYNANWMTAVEILDDDTYLGAENSFNLFTVRKN 940
Query: 303 DRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTII 360
+ D A+ E L YH+GE R GS + +LP +A S T+I
Sbjct: 941 N---DAATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSEA---------SLIPTVI 988
Query: 361 ASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP---VGVPK 417
T+ G I + + +++ L+ +Q A+ + + G H ++RS N V
Sbjct: 989 FGTVNGVIGVIASLPQDKFLFLQKLQQ--ALVKVIKGVGGLSHEQWRSFSNERKTVDARN 1046
Query: 418 ILDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L+ + E +
Sbjct: 1047 FLDGDLIESFLDLSRNKMEEI 1067
>gi|307109500|gb|EFN57738.1| hypothetical protein CHLNCDRAFT_56079 [Chlorella variabilis]
Length = 1144
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 102/239 (42%), Gaps = 33/239 (13%)
Query: 221 VRRFAVGRTRFM-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYC 269
+R + +G+ R + I L +RI VGD ++ F Y + +
Sbjct: 895 LRLYDMGKKRMLRKCEYRRLPTRIATLHVSGSRIYVGDGQESTFFMRYKKGDNQFYIFAD 954
Query: 270 DPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVS 329
D R V + +D DT +DR G++ V RL S + P + E +
Sbjct: 955 DIVPRHVTAALHLDYDTLAGADRFGNVFV----SRLPQEVSAQVEDDPTGGKYATETGLL 1010
Query: 330 IRKGSFIYKLPADDA--LGDCLASFESS------QTTIIASTLLGSIVIFIPISS-EEYE 380
G KL ++ +G+ + + + + + I+ T+ G+I + P +S E+ +
Sbjct: 1011 ---GGAPNKLRTINSFHVGETVTALQRAVLQPGGRELIVYGTINGAIGVLYPFTSKEDCD 1067
Query: 381 LLEAVQARL-AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ ++ + HP PLLG DH +RS P V ++DGD+ Q+ +L + + V
Sbjct: 1068 FFQHLEMHMRQEHP---PLLGRDHLAYRSFYFP--VKDVVDGDLCEQYPQLAADKARGV 1121
>gi|167517245|ref|XP_001742963.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778062|gb|EDQ91677.1| predicted protein [Monosiga brevicollis MX1]
Length = 1670
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 183/472 (38%), Gaps = 86/472 (18%)
Query: 1 MVHNKRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNN-DTCSSDIC---CVDPLSGSV 56
M + + L +RK L TP V YH S V T IC +D S V
Sbjct: 756 MENMQNLQIRKIPLDETPLGVTYHKSSGAFCVATDAARACPTPQEPICYLRLIDAQSFEV 815
Query: 57 LSSFKLELGET--GKSMELVRVGHE--QVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCI 112
SFKLE E+ G S+ +++ ++ + +VVGT++ +P +GR++VL +
Sbjct: 816 RDSFKLEQAESLFGHSLHTMQLRNDSTEYIVVGTAMHDPNRPLPK------QGRILVLRV 869
Query: 113 EHMQNSDCGSMTFCSKAGSSSQRTS--PFRE-IVGYATEQLSSSSLCSSPDDASCDGIKL 169
N D S A S FR+ +V +L SL S+P L
Sbjct: 870 ----NDDGKLELVVSHAIHDGGIFSLQAFRDGVVAGINGRLEYFSLESTP---------L 916
Query: 170 EETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVR--RFAVG 227
E ++ +A T + GM C L GN V D Q V ++
Sbjct: 917 ER----KVEVASQTVFRGMQTVSC-------LGVCGNTVLV----GDILQSVTAVNYSEQ 961
Query: 228 RTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLV----------A 277
R RF++ GD L + + ++CD Q LV
Sbjct: 962 RNRFVV----------GPGDPESRYLLTCFLPAEDRF--LFCDSDQNLVLGMPPVDTVEN 1009
Query: 278 DCVLMDVDTAV-VSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKG--- 333
D LM + + + D S + +C +P L P+ + + V+ R
Sbjct: 1010 DASLMHLAGRIHIGDNINSYVICACIHVW----TPYL-LCPDSTFCFAALFVTSRFAFGS 1064
Query: 334 -SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIH 392
S Y+ PA+ + + S I+ +T+LG + + + + + + +Q RLA
Sbjct: 1065 LSLSYERPAEAGEAGEDGAKQQSSPPIVFTTVLGGVGMILEVQQKHLWFMHEMQRRLA-- 1122
Query: 393 PLTAPLLGNDHSEFRS-----RENPVGVPKILDGDMLSQFLELTSTQQEAVL 439
+ + G H ++RS RE+ +DG+++ FLELT + E V+
Sbjct: 1123 DMGNAVGGLTHEDYRSTKNGKRESVTPARCFVDGNLIESFLELTPEEMEEVM 1174
>gi|328770812|gb|EGF80853.1| hypothetical protein BATDEDRAFT_29900 [Batrachochytrium dendrobatidis
JAM81]
Length = 1213
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 22/216 (10%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L RI +GD ++ + + Y ++ D R V ++D DT V D+
Sbjct: 986 IVTLHTQGNRIILGDAQESVHYAMYRAFDNRIVIFADDTIPRWVTATCMVDYDTVVGGDK 1045
Query: 293 KGSIAVLSCSDRLEDNASP--ECNLTPNCA-YHMGEIAVSIRKGSFIYKLPADDALGDCL 349
G+I V +RL S + + T N A + G + + K AD LG+ L
Sbjct: 1046 MGNIFV----NRLSAEVSKGIDEDTTGNQAIFDRGYLQGAPHK----VHHEADFFLGETL 1097
Query: 350 ASFESS------QTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGND 402
S + + ++ +TL+G I + IP IS ++ + + ++ + + PL G D
Sbjct: 1098 TSLTKTSLVPGGREILLYTTLMGGIGLLIPFISKDDVDFFQTLE--MTMRSECPPLCGRD 1155
Query: 403 HSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
H +RS PV I+DGD+ F + ++ +
Sbjct: 1156 HLAYRSFYTPVHA--IIDGDLCEMFNVMVGDKKRGI 1189
>gi|145510432|ref|XP_001441149.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408388|emb|CAK73752.1| unnamed protein product [Paramecium tetraurelia]
Length = 1174
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 109/280 (38%), Gaps = 41/280 (14%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLL 236
L+L +ST + A+ + R L AG V + N + +++ + I +
Sbjct: 895 LKLKHSTQIDEIPYALAAWRGR-LLVGAGCNLRV--YEMGNQRILKKAEIKNLNSFITSI 951
Query: 237 TAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI 296
RI V + D I Y+ + ++ D R V ++D T + D+ +I
Sbjct: 952 MVKEDRIYVAEVSDSIHLLRYNIRDQTFMELADDILPRYVTASTVLDYHTVIAGDKFENI 1011
Query: 297 AV----LSCSDRLED--------------NASPECNLTPNCAYHMGEIAVSIRKGSFIYK 338
V L + E+ N +P + C +++GE+ S++K
Sbjct: 1012 FVSRVPLDIDEEQEEHPYEYKMKMDQGCMNGAP-FKMDQICNFYVGEVITSLQK------ 1064
Query: 339 LPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPL 398
+A +S ++ T +GSI P ++E ++ + + + PL
Sbjct: 1065 ----------IALVSTSSEVVVYGTSMGSIAALYPFDNKE-DIDFFLHLEMYLRVEHQPL 1113
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH +FRS P I+DGD+ QF + +Q V
Sbjct: 1114 SGRDHMQFRSAYGP--CKSIIDGDLCEQFGNMQYNKQRTV 1151
>gi|397627714|gb|EJK68584.1| hypothetical protein THAOC_10223, partial [Thalassiosira oceanica]
Length = 456
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 88/228 (38%), Gaps = 46/228 (20%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
M+ L A R VGD + F Y A +L + D S R + L+DV+T V D
Sbjct: 231 MVKTLQAAGDRAFVGDMMQSMQFVRYDATANRLVLVARDRSARPITCQELLDVNTVAVGD 290
Query: 292 RKGSIAVL-----------------SCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGS 334
+ G++ L + D ++A+P+ L C YH+GE+ S+ + S
Sbjct: 291 KFGNVTTLRLPRGADTGAVDVSGTRALWDSSREDATPK--LETLCTYHVGEVVTSLTRAS 348
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE----YELLEAVQARLA 390
+ ++I T+ G I +P +S E Y LE+
Sbjct: 349 LV----------------AGGAESLIYVTVTGRIGALVPFTSREDVEFYTSLESHVRSEV 392
Query: 391 IHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
P G D +RS P V ++DGD+ + L +E +
Sbjct: 393 PRP-----TGRDPQSYRSFYCP--VKHVIDGDLCEAYGGLPYEARERI 433
>gi|374109159|gb|AEY98065.1| FAFR382Wp [Ashbya gossypii FDAG1]
Length = 1288
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 122/324 (37%), Gaps = 65/324 (20%)
Query: 168 KLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDN--PQRVRRFA 225
K ++L + T + A+CP+ D+ L NA + G + +
Sbjct: 947 KAANNRRFELLALHDTVAGSTIHAMCPFHDK-LLVPLANAVVLYGLGKKQLLKKSISYLP 1005
Query: 226 VGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
T+ ++ L + TR+AVGD + + + E + + D ++R V +D
Sbjct: 1006 TSITK-IVALDQWNGTRVAVGDIHESVTLLHFDERKNQFIPVADDVTKRHVTVVKFVDEC 1064
Query: 286 TAVVSDRKGSIAVLSCS---DRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPAD 342
T + DR G+I +L DRL LT N I +IR+ F + L
Sbjct: 1065 TVIGGDRFGNIWLLRLPLEYDRLIKEGVDSYLLTLNTG-----IPSNIRECVFKWHLLNH 1119
Query: 343 DALGDCLASFE-------SSQTTIIASTLLGSIVIFIPISS----EEYELLE-------- 383
+ D SF + + +I+ + L G+I IP+ + E ++LLE
Sbjct: 1120 FYINDIPMSFHLIASPQMADRASILYAGLQGTIGYLIPLITRREIEFFDLLEQAMRDADH 1179
Query: 384 --------------------------------AVQARLAIHPLTAPLLGNDHSEFRSREN 411
+VQ + I L+G D +RS N
Sbjct: 1180 LFYLDQENRLNDTSELNEGADEEGSVIDRRFPSVQKKRKIPEGAYSLVGRDAMMYRSYYN 1239
Query: 412 PVGVPKILDGDMLSQFLELTSTQQ 435
P V + DGD+ QFLEL +++
Sbjct: 1240 P--VRHVTDGDLCEQFLELYPSEK 1261
>gi|326426696|gb|EGD72266.1| hypothetical protein PTSG_00286 [Salpingoeca sp. ATCC 50818]
Length = 1104
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
+ VGD + + +D KL+ + + V+ C L++ +V+ S++V C
Sbjct: 886 VLVGDMLNAVFVMQKAQD--KLQLVAGSQTANWVSSCALVNETVFLVASHAHSLSV--CQ 941
Query: 303 DRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIAS 362
E ++ + L ++GE S + + D +S T +
Sbjct: 942 REFEPGSTMQ-TLNAKFEIYLGETVTSFVRAALGSAAAVD-------SSMPLRNTFFVFG 993
Query: 363 TLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGV-----PK 417
T+ G + +P++ + ELL A++ R+ L G DH EFR+ + + P+
Sbjct: 994 TMGGGLACLLPLTPPQTELLTALECRM--EEKIGGLGGLDHREFRTARDEQRMAQQVNPR 1051
Query: 418 ILDGDMLSQFLELTSTQQEAVLS 440
++DGD++ FL+L +Q+ +++
Sbjct: 1052 LVDGDLVETFLQLPEEEQKELVA 1074
>gi|55976392|sp|Q6E7D1.1|DDB1_SOLCE RecName: Full=DNA damage-binding protein 1; AltName: Full=UV-damaged
DNA-binding protein 1
gi|49484911|gb|AAT66742.1| UV-damaged DNA binding protein 1 [Solanum cheesmaniae]
Length = 1095
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 17/200 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I + + +E+ D + ++ ++D D + ++ ++ V
Sbjct: 887 IVVGDLMKSISLLIFKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN 946
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
S+ D + YH+GE R GS + +LP D T+I
Sbjct: 947 SEGATDEERSRLEVVGE--YHLGEFVNRFRHGSLVMRLPDSDV---------GQIPTVIF 995
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP---VGVPKI 418
T+ G I + + ++Y LE +Q L + + G H ++RS N V
Sbjct: 996 GTVNGVIGVIASLPHDQYLFLEKLQTNL--RKVIKGVGGLSHEQWRSFYNEKKTVDAKNF 1053
Query: 419 LDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L+ + E +
Sbjct: 1054 LDGDLIESFLDLSRNRMEEI 1073
>gi|349605921|gb|AEQ01001.1| Splicing factor 3B subunit 3-like protein, partial [Equus caballus]
Length = 162
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 23/120 (19%)
Query: 321 YHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEY 379
YH+GE +S++K + I +++ +TL G I I +P +S E++
Sbjct: 40 YHVGETVLSLQKTTLI----------------PGGSESLVYTTLSGGIGILVPFTSHEDH 83
Query: 380 ELLEAVQARL-AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ + V+ L + HP PL G DH FRS PV ++DGD+ QF + +Q+ V
Sbjct: 84 DFFQHVEMHLRSEHP---PLCGRDHLSFRSYYFPVK--NVIDGDLCEQFNSMEPNKQKNV 138
>gi|350537001|ref|NP_001234275.1| DNA damage-binding protein 1 [Solanum lycopersicum]
gi|350539125|ref|NP_001233864.1| UV damaged DNA binding protein 1 [Solanum lycopersicum]
gi|55976440|sp|Q6QNU4.1|DDB1_SOLLC RecName: Full=DNA damage-binding protein 1; AltName: Full=High
pigmentation protein 1; AltName: Full=UV-damaged
DNA-binding protein 1
gi|38455768|gb|AAR20885.1| UV damaged DNA binding protein 1 [Solanum lycopersicum]
gi|42602165|gb|AAS21683.1| UV-damaged DNA binding protein 1 [Solanum lycopersicum]
Length = 1090
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 17/200 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I + + +E+ D + ++ ++D D + ++ ++ V
Sbjct: 882 IVVGDLMKSISLLIFKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN 941
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
S+ D + YH+GE R GS + +LP D T+I
Sbjct: 942 SEGATDEERSRLEVVGE--YHLGEFVNRFRHGSLVMRLPDSDV---------GQIPTVIF 990
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP---VGVPKI 418
T+ G I + + ++Y LE +Q L + + G H ++RS N V
Sbjct: 991 GTVNGVIGVIASLPHDQYLFLEKLQTNL--RKVIKGVGGLSHEQWRSFYNEKKTVDAKNF 1048
Query: 419 LDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L+ + E +
Sbjct: 1049 LDGDLIESFLDLSRNRMEEI 1068
>gi|268568396|ref|XP_002640241.1| C. briggsae CBR-TAG-203 protein [Caenorhabditis briggsae]
Length = 1218
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
RI V D ++ + F Y + +L D + R V+ ++D T ++D+ G+++V+
Sbjct: 1000 RIIVSDSQESVHFLRYRKGDNQLVVFADDTTPRYVSCVCVLDYHTVAIADKFGNLSVVRL 1059
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESS------ 355
+R+ ++ + ++ + + G + + +K +L A+ +GD + S + +
Sbjct: 1060 PERVNEDVQDDPTVSKS-VWDRGWLNGASQK----VELVANFFIGDTITSLQKTSLMPGA 1114
Query: 356 QTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVG 414
++ +T+ G+I + +S +E + ++ + + PL G DH +RS P
Sbjct: 1115 NEALVYTTIGGAIGCLVSFMSKDEVDFFTNLE--MHVRSEYPPLCGRDHLSYRSYYAP-- 1170
Query: 415 VPKILDGDMLSQFLELTSTQQEAV 438
++DGD+ QF + ++Q+ V
Sbjct: 1171 CKSVIDGDICEQFSLMELSKQKEV 1194
>gi|302769568|ref|XP_002968203.1| hypothetical protein SELMODRAFT_145521 [Selaginella moellendorffii]
gi|300163847|gb|EFJ30457.1| hypothetical protein SELMODRAFT_145521 [Selaginella moellendorffii]
Length = 1089
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 21/202 (10%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E+ D + + ++D D + ++ ++ V
Sbjct: 881 IVVGDLMKSISLLLYKPEEGAIEERARDYNANWMTAVEILDDDIYLGAENSFNLFTVRKN 940
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQT-TII 360
SD D + YH+GE R GS + +LP + E+SQ T+I
Sbjct: 941 SDAATDEERGRLEVVGE--YHLGEFVNRFRHGSLVMRLPDN----------ETSQIPTVI 988
Query: 361 ASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRS----RENPVGVP 416
T+ G I + + E++ L+ +Q LA + + G H ++RS R+N
Sbjct: 989 FGTVNGVIGVVASLQQEQFNFLQRLQHCLA--KVIKGVGGLSHEQWRSFSSERKN-ADAK 1045
Query: 417 KILDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L + + V
Sbjct: 1046 NFLDGDLIESFLDLNRAKMDEV 1067
>gi|298713790|emb|CBJ27162.1| spliceosomal protein sap, putative [Ectocarpus siliculosus]
Length = 1256
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 110/279 (39%), Gaps = 38/279 (13%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
+L L + T P + LA+ + R L G + + + + +R+ R M++
Sbjct: 977 RLVLLHKTEVPDVPLAMKEFQGR-LLVGVGQSLRM--YDLGRKKLLRKCENKRMPSMVVS 1033
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGS 295
LT R+ GD + + Y +L + D R + L+D D+ +D+ G+
Sbjct: 1034 LTVTGDRVFAGDQMESCHCFKYRRAENRLVEFADDQVPRFMTKTCLLDYDSIAGADKFGN 1093
Query: 296 IAVLSCS-DRLEDNASPECNL----------TPN-----CAYHMGEIAVSIRKGSFIYKL 339
I VL D +D +P N PN +H+GE+ S+R+ + +
Sbjct: 1094 IFVLRVPLDVSDDVDNPTGNRLLWDSGHLSGAPNKVQQQLQFHVGEVVSSLRRTTLV--- 1150
Query: 340 PADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLL 399
++ ST+ GSI +P S + ++ + + L
Sbjct: 1151 -------------PGGAEVLLYSTINGSIGALLPFKSRD-DVDFFTHMEMYMRQEKPTLC 1196
Query: 400 GNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH +RS P ++DGD+ QF L +Q+ V
Sbjct: 1197 GRDHISYRSYYLP--AKDVIDGDLCEQFSSLPFEKQKLV 1233
>gi|302788810|ref|XP_002976174.1| hypothetical protein SELMODRAFT_151061 [Selaginella moellendorffii]
gi|300156450|gb|EFJ23079.1| hypothetical protein SELMODRAFT_151061 [Selaginella moellendorffii]
Length = 1089
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 21/202 (10%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E+ D + + ++D D + ++ ++ V
Sbjct: 881 IVVGDLMKSISLLLYKPEEGAIEERARDYNANWMTAVEILDDDIYLGAENSFNLFTVRKN 940
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQT-TII 360
SD D + YH+GE R GS + +LP + E+SQ T+I
Sbjct: 941 SDAATDEERGRLEVVGE--YHLGEFVNRFRHGSLVMRLPDN----------ETSQIPTVI 988
Query: 361 ASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRS----RENPVGVP 416
T+ G I + + E++ L+ +Q LA + + G H ++RS R+N
Sbjct: 989 FGTVNGVIGVVASLQQEQFNFLQRLQHCLA--KVIKGVGGLSHEQWRSFSSERKN-ADAK 1045
Query: 417 KILDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L + + V
Sbjct: 1046 NFLDGDLIESFLDLNRAKMDEV 1067
>gi|346327528|gb|EGX97124.1| pre-mRNA splicing factor RSE1 [Cordyceps militaris CM01]
Length = 1206
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 89/224 (39%), Gaps = 38/224 (16%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D + G+ Y + KL D R ++D ++ D+
Sbjct: 979 IVSLNTQGSRIVVSDVQQGVTLVVYKSASNKLIPFVDDSIARWSTCTTMVDYESVAGGDK 1038
Query: 293 KGSIAVLSCSDRLEDNASPEC-----------------NLTPNCAYHMGEIAVSIRKGSF 335
G++ ++ + + A + L C + +I SI K
Sbjct: 1039 FGNMFIVRSPAKASEEADEDAAGLHLVNARDYLHGTQHRLELMCHFFTQDILTSINKTGL 1098
Query: 336 IYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPL 394
+ Q ++ S ++G+I +FIP +S E+ + ++++ L
Sbjct: 1099 VV----------------GGQDVLLWSGIMGTIGVFIPFVSREDTDFFQSLEQHLRTE-- 1140
Query: 395 TAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
PL G DH +RS P V ++DGD+ +F L + +++ +
Sbjct: 1141 DGPLAGRDHLMYRSYYAP--VKGVIDGDLCERFSILPNDKKQMI 1182
>gi|397615212|gb|EJK63291.1| hypothetical protein THAOC_16062, partial [Thalassiosira oceanica]
Length = 322
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 88/228 (38%), Gaps = 46/228 (20%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
M+ L A R VGD + F Y A +L + D S R + L+DV+T V D
Sbjct: 97 MVKTLQAAGDRAFVGDMMQSMQFVRYDATANRLVLVARDRSARPITCQELLDVNTVAVGD 156
Query: 292 RKGSIAVL-----------------SCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGS 334
+ G++ L + D ++A+P+ L C YH+GE+ S+ + S
Sbjct: 157 KFGNVTTLRLPRGADTGAVDVSGTRALWDSSREDATPK--LETLCTYHVGEVVTSLTRAS 214
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE----YELLEAVQARLA 390
+ ++I T+ G I +P +S E Y LE+
Sbjct: 215 LV----------------AGGAESLIYVTVTGRIGALVPFTSREDVEFYTSLESHVRSEV 258
Query: 391 IHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
P G D +RS P V ++DGD+ + L +E +
Sbjct: 259 PRP-----TGRDPQSYRSFYCP--VKHVIDGDLCEAYGGLPYEARERI 299
>gi|354547430|emb|CCE44165.1| hypothetical protein CPAR2_503890 [Candida parapsilosis]
Length = 1171
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 39/209 (18%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
RI + D + I+F + + + + D +R + +D DT + D+ G+I V
Sbjct: 950 RILLADSANSIVFAKFDNEENQFIPVADDVVKRNITAWKQLDYDTIIGGDKFGNIFVTRL 1009
Query: 302 SDR------------LEDNASPECNLTP-------NCAYHMGEIAVSIRKGSFIYKLPAD 342
DR L+ A NL C Y++ +I S + GSF
Sbjct: 1010 -DREESKQVDQDWTVLKQAAQNSSNLNSCVFKLQNLCQYYIPDIITSFQLGSF------- 1061
Query: 343 DALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGN 401
LG + II + ++G+I + IP +S E EL+ +Q ++ I + G
Sbjct: 1062 -NLG--------GEECIIYTGVMGTIGVLIPLLSKSEIELVHDLQLQIGIWNDGVNVAGK 1112
Query: 402 DHSEFRSRENPVGVPKILDGDMLSQFLEL 430
+H + RS NP + DGD L + +
Sbjct: 1113 NHGKLRSYYNP--RKNVYDGDFLELYFAI 1139
>gi|315053737|ref|XP_003176243.1| pre-mRNA-splicing factor rse1 [Arthroderma gypseum CBS 118893]
gi|311338089|gb|EFQ97291.1| pre-mRNA-splicing factor rse1 [Arthroderma gypseum CBS 118893]
Length = 1181
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 103/235 (43%), Gaps = 32/235 (13%)
Query: 219 QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILF--YSYHEDARKLEQIYCDPSQRLV 276
Q +R+ T +I+ L +RI V D ++ + + Y Y E+A L D R
Sbjct: 934 QLLRKCQAQITPRVIVGLQTQGSRIIVSDVQESVTYVVYKYQENA--LIPFADDIISRWT 991
Query: 277 ADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFI 336
++D +T D+ G+I +L C + + A + G A I + ++
Sbjct: 992 TCTTMVDYETVAGGDKFGNIWLLRCPTKASEEADED-----------GSGAHLIHERQYL 1040
Query: 337 YKLPADDAL------GDCLASFESSQTT------IIASTLLGSIVIFIP-ISSEEYELLE 383
P +L D S + +Q ++ + L G++ +F+P I+ ++ + +
Sbjct: 1041 QGAPNRLSLVVHFYSQDIPTSIQKTQLVAGGRDILVWTGLQGTVGMFVPFITRDDVDFFQ 1100
Query: 384 AVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
++ +LA APL G DH +R P ++DGD+ FL L + +++A+
Sbjct: 1101 TLEMQLASQ--NAPLAGRDHLIYRGYYAP--CKGVIDGDLCETFLLLPNDKKQAI 1151
>gi|452002380|gb|EMD94838.1| hypothetical protein COCHEDRAFT_1128717 [Cochliobolus heterostrophus
C5]
Length = 1235
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 96/234 (41%), Gaps = 42/234 (17%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDA---RKLEQIYCDPSQRLVADCVLMDVDTAVV 289
I L +R+ V D + Y H+D +L D R ++D DT V
Sbjct: 1003 ITGLKTQGSRLVVSDQAQSVT-YVVHKDQVHPNRLIPFVDDTVARHTTASEMLDYDTTVG 1061
Query: 290 SDRKGSIAVLSCSDRLEDNA--SPE----------CNLTPN-----CAYHMGEIAVSIRK 332
D+ G+I ++ C ++ +++ SP+ TPN Y +I VSI+K
Sbjct: 1062 GDKFGNIWLVRCPQKVSESSDESPDGSDLLVDKSYLGGTPNRLDLIAHYFTNDIPVSIQK 1121
Query: 333 GSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE-YELLEAVQARLAI 391
+ + + + L G++ IP +S +++ + Q L +
Sbjct: 1122 TVLL----------------SGGERVVFWAGLQGTLGALIPFNSRRSHKMFQ--QLELQL 1163
Query: 392 HPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGS 445
PL G DH FRS PV ++DGD++ +FL L ++E++ GS
Sbjct: 1164 RSDDKPLSGRDHLAFRSYFAPV--KSVIDGDLIERFLVLPRDKRESIAGQITGS 1215
>gi|328853180|gb|EGG02320.1| hypothetical protein MELLADRAFT_44871 [Melampsora larici-populina
98AG31]
Length = 1210
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 27/238 (11%)
Query: 219 QRVRRFAVGRTRFM-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQI 267
+ +R F +G+ + + I L+ R+ VGD +D I + Y +L
Sbjct: 958 KALRIFDLGKKKLLRKVENKTFSAAISSLSTQGPRLLVGDAQDSISYAVYKPAENRLLVF 1017
Query: 268 YCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIA 327
D S R ++D DT DR G++ V +R+ S E + P A M E
Sbjct: 1018 ADDISPRWTTCATMVDYDTCAGGDRFGNVWV----NRIPKTVSDEVDDDPTGAGIMHEKG 1073
Query: 328 VSIRKGSFIYKLPADDALGDCLASFESS------QTTIIASTLLGSIVIFIP-ISSEEYE 380
+ + L L D S E + + ++ + L G++ I IP +S E+ +
Sbjct: 1074 YLMGAPHKVKNL-VHFHLNDIPTSMEKTSLVPGGREVLLYTGLQGTVGILIPFLSKEDVD 1132
Query: 381 LLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ ++ + + L+G DH +R P V +DGDM F L ++Q+ V
Sbjct: 1133 FFQTLE--MHMRSELPSLVGRDHLAYRGYYFP--VKNCVDGDMCESFALLPMSKQQQV 1186
>gi|242089089|ref|XP_002440377.1| hypothetical protein SORBIDRAFT_09g030580 [Sorghum bicolor]
gi|241945662|gb|EES18807.1| hypothetical protein SORBIDRAFT_09g030580 [Sorghum bicolor]
Length = 1783
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 16/122 (13%)
Query: 321 YHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYE 380
YH+GE R GS + +LP D +G T+I T+ G I I + ++Y
Sbjct: 981 YHLGEFVNRFRHGSLVMRLP-DSEIGQI--------PTVIFGTINGVIGIIASLPHDQYV 1031
Query: 381 LLEAVQARLAIHPLTAPLLGN-DHSEFRSRENPVGVPK---ILDGDMLSQFLELTSTQQE 436
LE +Q+ L + +GN H ++RS N + LDGD++ FL+L+ ++ E
Sbjct: 1032 FLEKLQSTLVKY---IKGVGNLSHEQWRSFHNDKKTAEARNFLDGDLIESFLDLSRSKME 1088
Query: 437 AV 438
V
Sbjct: 1089 EV 1090
>gi|451852814|gb|EMD66108.1| hypothetical protein COCSADRAFT_34693 [Cochliobolus sativus ND90Pr]
Length = 1235
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 96/234 (41%), Gaps = 42/234 (17%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDA---RKLEQIYCDPSQRLVADCVLMDVDTAVV 289
I L +R+ V D + Y H+D +L D R ++D DT V
Sbjct: 1003 ITGLKTQGSRLVVSDQAQSVT-YVVHKDQVHPNRLIPFVDDTIARHTTASEMLDYDTTVG 1061
Query: 290 SDRKGSIAVLSCSDRLEDNA--SPE----------CNLTPN-----CAYHMGEIAVSIRK 332
D+ G+I ++ C ++ +++ SP+ TPN Y +I VSI+K
Sbjct: 1062 GDKFGNIWLVRCPQKVSESSDESPDGSDLLVDKSYLGGTPNRLDLIAHYFTNDIPVSIQK 1121
Query: 333 GSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE-YELLEAVQARLAI 391
+ + + + L G++ IP +S +++ + Q L +
Sbjct: 1122 TVLL----------------SGGERVVFWAGLQGTLGALIPFNSRRSHKMFQ--QLELQL 1163
Query: 392 HPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGS 445
PL G DH FRS PV ++DGD++ +FL L ++E++ GS
Sbjct: 1164 RSDDKPLSGRDHLAFRSYFAPV--KSVIDGDLIERFLVLPRDKRESIAGQITGS 1215
>gi|213405251|ref|XP_002173397.1| U2 snRNP-associated protein Sap130 [Schizosaccharomyces japonicus
yFS275]
gi|212001444|gb|EEB07104.1| U2 snRNP-associated protein Sap130 [Schizosaccharomyces japonicus
yFS275]
Length = 1166
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 95/227 (41%), Gaps = 12/227 (5%)
Query: 217 NPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLV 276
N + +R+ V I + RI V D + F + + + D R
Sbjct: 924 NKKLLRKSEVRAVPNFITTIQTQGYRIIVTDAQHSAFFVVFKPEDNRYIVFADDCVARWA 983
Query: 277 ADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECN----LTPNCAYHMGEIAVSIRK 332
++D DT V D+ ++ +L C + + A E + L H + +
Sbjct: 984 TATAMVDYDTVVGGDKFSNLWLLRCPESVSQLADEENSGSKLLHEKPFLHSSPHKLDLMA 1043
Query: 333 GSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAI 391
+F+ +P + E ++ I+ + LLG+I + P ++ E+ + +++ L
Sbjct: 1044 HTFVNDIPTSI---QKVQLVEGARDVIMWTGLLGTIGVLSPFVNREDVRFFQQLESLLRA 1100
Query: 392 HPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
L+ ++G DH +RS PV ++DGD+ Q+ L +QE++
Sbjct: 1101 EDLS--IVGRDHLAYRSYYVPVKC--VVDGDLCEQYYNLPRDKQESI 1143
>gi|348681092|gb|EGZ20908.1| hypothetical protein PHYSODRAFT_259403 [Phytophthora sojae]
Length = 1137
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 20/220 (9%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+++ + + I VGD + SY + +E+I D + ++ ++D DT + S+
Sbjct: 895 LVLYMESRGDFIVVGDLMKSVSLLSYKQLDGTIEEIAKDLNSNWMSALGIVDDDTYIGSE 954
Query: 292 RKGSIAVLSCSDRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCL 349
++ + R AS E L +H+GE R GS PA D +
Sbjct: 955 TDFNLFTVQ---RNSGAASDEERGRLETVGEFHLGEFVNRFRYGSLT---PAAAGPTDMV 1008
Query: 350 ASFESS-------QTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGND 402
E + +++ T+ G I + +P++ ++Y L VQ A+ + + G
Sbjct: 1009 DVVEQAPIVPAAQNQSMLFGTVSGMIGVILPLTKDQYSFLLRVQQ--ALTQVVKGVGGFS 1066
Query: 403 HSEFRSRENPVGVPK---ILDGDMLSQFLELTSTQQEAVL 439
H ++R EN V + +DGD++ FL+L Q V+
Sbjct: 1067 HKDWRMFENRRSVSEARNFIDGDLVESFLDLPKAQMTKVV 1106
>gi|18410222|ref|NP_567015.1| splicing factor 3B subunit 3 [Arabidopsis thaliana]
gi|18410226|ref|NP_567016.1| putative splicing factor [Arabidopsis thaliana]
gi|7019653|emb|CAB75754.1| spliceosomal-like protein [Arabidopsis thaliana]
gi|7019655|emb|CAB75756.1| spliceosomal-like protein [Arabidopsis thaliana]
gi|332645831|gb|AEE79352.1| splicing factor 3B subunit 3 [Arabidopsis thaliana]
gi|332645833|gb|AEE79354.1| putative splicing factor [Arabidopsis thaliana]
Length = 1214
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 114/291 (39%), Gaps = 63/291 (21%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+C + R LA G +R + +G+ R +
Sbjct: 935 LELLHKTQVEGVPLALCQFQGR-LLAGIGPV-------------LRLYDLGKKRLLRKCE 980
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ + Y D +L D R + +D D
Sbjct: 981 NKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFD 1040
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G++ + S+ +E++ + + N PN +H+G++
Sbjct: 1041 TMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVT 1100
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSI-VIFIPISSEEYELLEAVQA 387
++K S I +I+ T++GSI + S ++ + ++
Sbjct: 1101 CLQKASMI----------------PGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLE- 1143
Query: 388 RLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ + PL G DH +RS P V ++DGD+ QF L Q +
Sbjct: 1144 -MHMRQEYPPLCGRDHMAYRSAYFP--VKDVIDGDLCEQFPTLPMDLQRKI 1191
>gi|297816810|ref|XP_002876288.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322126|gb|EFH52547.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 633
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 114/291 (39%), Gaps = 63/291 (21%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+C + R LA G +R + +G+ R +
Sbjct: 354 LELLHKTQVEGVPLALCQFQGR-LLAGIGPV-------------LRLYDLGKKRLLRKCE 399
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ + Y D +L D R + +D D
Sbjct: 400 NKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFD 459
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G++ + S+ +E++ + + N PN +H+G++
Sbjct: 460 TMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVT 519
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSI-VIFIPISSEEYELLEAVQA 387
++K S I +I+ T++GSI + S ++ + ++
Sbjct: 520 CLQKASMI----------------PGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLE- 562
Query: 388 RLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ + PL G DH +RS P V ++DGD+ QF L Q +
Sbjct: 563 -MHMRQEYPPLCGRDHMAYRSAYFP--VKDVIDGDLCEQFPTLPMDLQRKI 610
>gi|448114553|ref|XP_004202604.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
gi|359383472|emb|CCE79388.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
Length = 1248
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 87/222 (39%), Gaps = 45/222 (20%)
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
RI D F Y + + + D +R + +D DT V D+ G+I V
Sbjct: 1018 NRIMAADANISSTFVKYDQVENQFFPLADDIMKRKITSMCSLDYDTIVGGDKFGNIFVSR 1077
Query: 301 CSDRLEDNASPECNLTPN---------------CAYHMGEIAVSIRKGSFIYKLPADDAL 345
+ L A + L + C ++ G+I S KGS I L
Sbjct: 1078 IPEVLSKQADQDWGLIRHQDSYLNGAVSRLKNLCEFYSGDIPTSFSKGSLI--------L 1129
Query: 346 GDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIH-----------P 393
G S+ +I + L+G++ IP ++ E + ++A L +
Sbjct: 1130 G--------SEESIFYTGLMGTVGALIPLVTKSEVQFFIELEAELRGYFDYNFDNFDEQK 1181
Query: 394 LTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQ 435
LLG DH + RS NP V ++DGD++ +F E++ +
Sbjct: 1182 NGYNLLGKDHLKHRSYYNP--VKNVIDGDLIERFSEVSYNNK 1221
>gi|238487250|ref|XP_002374863.1| nuclear mRNA splicing factor, putative [Aspergillus flavus NRRL3357]
gi|220699742|gb|EED56081.1| nuclear mRNA splicing factor, putative [Aspergillus flavus NRRL3357]
Length = 1210
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 20/207 (9%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 982 IVGLQTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETTAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMG-----EIAVSIRKGSFIYKLPADDA 344
G+I +L C ++ + A + +L Y G E+ + + + +P
Sbjct: 1042 FGNIWMLRCPKKISEQADEDGSGAHLIHERGYLHGTPNRLELMIHV----YTQDIPTTLH 1097
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDH 403
+A + ++ S G+I + +P +S E+ + + ++ +LA PL G DH
Sbjct: 1098 KTQLVAG---GRDILVWSGFHGTIGMLVPFVSREDVDFFQNLEMQLAAQ--NPPLAGRDH 1152
Query: 404 SEFRSRENPVGVPKILDGDMLSQFLEL 430
+RS P V ++DGD+ + L
Sbjct: 1153 LIYRSYYAP--VKGVIDGDLCETYFLL 1177
>gi|308504990|ref|XP_003114678.1| hypothetical protein CRE_28194 [Caenorhabditis remanei]
gi|308258860|gb|EFP02813.1| hypothetical protein CRE_28194 [Caenorhabditis remanei]
Length = 270
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 97/217 (44%), Gaps = 26/217 (11%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
RI V D ++ + F Y + +L D + R V+ ++D T V+D+ G++AV+
Sbjct: 36 RIIVSDSQESVHFLRYRKGDNQLVVFADDTTPRYVSCVCVLDYHTVAVADKFGNLAVVRL 95
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESS------ 355
+R+ ++ + ++ + + G + + +K +L A+ +GD + S + +
Sbjct: 96 PERVNEDVQDDPTVSKS-VWDRGWLNGASQK----VELVANFFIGDTITSLQKTSLMPGA 150
Query: 356 QTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGV 415
++ +T+ G+I + S++ E+ + + PL G DH +RS P V
Sbjct: 151 NEALVYTTIGGAIGCLVSFMSKD-EVDFFTNLEMHVRSEYPPLCGRDHLAYRSYYAPCKV 209
Query: 416 --------------PKILDGDMLSQFLELTSTQQEAV 438
++DGD+ QF + ++Q+ V
Sbjct: 210 CFNFLLFRSIVSLFQSVIDGDICEQFSLMDLSKQKEV 246
>gi|297820284|ref|XP_002878025.1| hypothetical protein ARALYDRAFT_906938 [Arabidopsis lyrata subsp.
lyrata]
gi|297323863|gb|EFH54284.1| hypothetical protein ARALYDRAFT_906938 [Arabidopsis lyrata subsp.
lyrata]
Length = 454
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 114/291 (39%), Gaps = 63/291 (21%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+C + R LA G +R + +G+ R +
Sbjct: 175 LELLHKTQVEGVPLALCQFQGR-LLAGIGPV-------------LRLYDLGKKRLLRKCE 220
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ + Y D +L D R + +D D
Sbjct: 221 NKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFD 280
Query: 286 TAVVSDRKGSIAVL----SCSDRLEDNAS--------PECNLTPN-----CAYHMGEIAV 328
T +D+ G++ + S+ +E++ + + N PN +H+G++
Sbjct: 281 TMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVT 340
Query: 329 SIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSI-VIFIPISSEEYELLEAVQA 387
++K S I +I+ T++GSI + S ++ + ++
Sbjct: 341 CLQKASMI----------------PGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLE- 383
Query: 388 RLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ + PL G DH +RS P V ++DGD+ QF L Q +
Sbjct: 384 -MHMRQEYPPLCGRDHMAYRSAYFP--VKDVIDGDLCEQFPTLPMDLQRKI 431
>gi|317143715|ref|XP_001819645.2| pre-mRNA-splicing factor rse1 [Aspergillus oryzae RIB40]
Length = 1209
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 20/207 (9%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 982 IVGLQTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETTAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMG-----EIAVSIRKGSFIYKLPADDA 344
G+I +L C ++ + A + +L Y G E+ + + + +P
Sbjct: 1042 FGNIWMLRCPKKISEQADEDGSGAHLIHERGYLHGTPNRLELMIHV----YTQDIPTTLH 1097
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDH 403
+A + ++ S G+I + +P +S E+ + + ++ +LA PL G DH
Sbjct: 1098 KTQLVAG---GRDILVWSGFHGTIGMLVPFVSREDVDFFQNLEMQLAAQ--NPPLAGRDH 1152
Query: 404 SEFRSRENPVGVPKILDGDMLSQFLEL 430
+RS P V ++DGD+ + L
Sbjct: 1153 LIYRSYYAP--VKGVIDGDLCETYFLL 1177
>gi|361131929|gb|EHL03544.1| putative Pre-mRNA-splicing factor rse1 [Glarea lozoyensis 74030]
Length = 967
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 96/225 (42%), Gaps = 38/225 (16%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI V D ++ ++ Y +L D R + ++D +T D
Sbjct: 739 LIVGLRTQGSRIIVSDVQESVVMVVYKFQENRLIPFVDDTIARWTSCSTMVDYETVAGGD 798
Query: 292 RKGSIAVLSCSDRLEDNASPECN-----------------LTPNCAYHMGEIAVSIRKGS 334
+ G++ +L C + + A E + LT ++ +I +SI+K +
Sbjct: 799 KFGNLWLLRCPAKASEEADEEGSGAHLLHERQYLQGAPHRLTLMAHFYSQDIPMSIQKTN 858
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHP 393
+ P DCL + + L G++ I IP + E+ + + ++ +
Sbjct: 859 LVVGGP------DCL----------LWAGLQGTLGILIPFVGREDVDFFQTLEQHMRNE- 901
Query: 394 LTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
APL G DH +RS P V ++DGD+ ++ L + +++ +
Sbjct: 902 -DAPLAGRDHLIYRSYYVP--VKGMIDGDLCERYTLLPTDKKQMI 943
>gi|391867503|gb|EIT76749.1| splicing factor 3b, subunit 3 [Aspergillus oryzae 3.042]
Length = 1034
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 20/207 (9%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 807 IVGLQTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETTAGGDK 866
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMG-----EIAVSIRKGSFIYKLPADDA 344
G+I +L C ++ + A + +L Y G E+ + + + +P
Sbjct: 867 FGNIWMLRCPKKISEQADEDGSGAHLIHERGYLHGTPNRLELMIHV----YTQDIPTTLH 922
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDH 403
+A + ++ S G+I + +P +S E+ + + ++ +LA PL G DH
Sbjct: 923 KTQLVAG---GRDILVWSGFHGTIGMLVPFVSREDVDFFQNLEMQLAAQ--NPPLAGRDH 977
Query: 404 SEFRSRENPVGVPKILDGDMLSQFLEL 430
+RS P V ++DGD+ + L
Sbjct: 978 LIYRSYYAP--VKGVIDGDLCETYFLL 1002
>gi|321478515|gb|EFX89472.1| hypothetical protein DAPPUDRAFT_303245 [Daphnia pulex]
Length = 1158
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 15/200 (7%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC- 301
I VGD I Y E++ D + ++ ++D DT + ++ S + C
Sbjct: 938 ILVGDLMRSITLLQYKTMEGSFEEMARDSNPNWMSAVEILDDDTFLGAEN--SFNLFVCQ 995
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
D LT +H+G++ R GS + D + L + +Q ++
Sbjct: 996 KDSAATTEEERQQLTEVGRFHLGDMVNVFRHGSLVM-----DHAAETLTT--PTQGCVLF 1048
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGV---PKI 418
T+ G+I + + SE Y L VQ R+A + P+ +HS +RS V
Sbjct: 1049 GTVHGAIGVVTQLPSEFYHFLSEVQTRMA--RVIKPVGKIEHSFWRSFATERKVEPCEGF 1106
Query: 419 LDGDMLSQFLELTSTQQEAV 438
+DGD++ FL+L+S + + V
Sbjct: 1107 IDGDLIESFLDLSSDKMKEV 1126
>gi|320164105|gb|EFW41004.1| splicing factor 3B subunit 3 [Capsaspora owczarzaki ATCC 30864]
Length = 1218
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 84/202 (41%), Gaps = 15/202 (7%)
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGS 295
+T RI V D ++ F Y L D + R V ++D DT D+ G+
Sbjct: 992 ITTSGGRIVVTDVQESFHFLRYRPSDNMLAVFADDSNPRWVTSSTMVDYDTVAAGDKFGN 1051
Query: 296 IAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE-- 353
+ VL RL + + P +G ++ + + +GD + + +
Sbjct: 1052 VFVL----RLPQDLQDDLEDDPTGGRLLGSSKNTLNGAAQKADTIINFHVGDTVTTMQKT 1107
Query: 354 ----SSQTTIIASTLLGSIVIFIPISSE-EYELLEAVQARLAIHPLTAPLLGNDHSEFRS 408
S ++ +T LG+I + IP +++ + + + ++ + + P+ G DH FRS
Sbjct: 1108 ALIPSGSECLVYTTTLGAIGVLIPFTTQSDIDFFKHLE--MHMRQENPPICGRDHLAFRS 1165
Query: 409 RENPVGVPKILDGDMLSQFLEL 430
P ++DGD+ QF L
Sbjct: 1166 HYFP--SKNVIDGDLCEQFNSL 1185
>gi|83767504|dbj|BAE57643.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1270
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 20/207 (9%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 982 IVGLQTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETTAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMG-----EIAVSIRKGSFIYKLPADDA 344
G+I +L C ++ + A + +L Y G E+ + + + +P
Sbjct: 1042 FGNIWMLRCPKKISEQADEDGSGAHLIHERGYLHGTPNRLELMIHV----YTQDIPTTLH 1097
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDH 403
+A + ++ S G+I + +P +S E+ + + ++ +LA PL G DH
Sbjct: 1098 KTQLVAG---GRDILVWSGFHGTIGMLVPFVSREDVDFFQNLEMQLAAQ--NPPLAGRDH 1152
Query: 404 SEFRSRENPVGVPKILDGDMLSQFLEL 430
+RS P V ++DGD+ + L
Sbjct: 1153 LIYRSYYAP--VKGVIDGDLCETYFLL 1177
>gi|428180158|gb|EKX49026.1| hypothetical protein GUITHDRAFT_68305 [Guillardia theta CCMP2712]
Length = 1202
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 106/292 (36%), Gaps = 55/292 (18%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
QL + T G+ A+C + R L G+A + + + +R+ +++
Sbjct: 914 QLTFVHKTPIDGVPRALCSFQGR-LLVGVGSALRL--YEMGKRKLLRKCENRNIPNLVVT 970
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGS 295
++ RI VGD + I F Y+ +L D R + +D DT +D+ G+
Sbjct: 971 ISTMGDRIYVGDVAESISFLKYNRILNELVIFADDTHPRWMTAACPVDYDTVAGADKFGN 1030
Query: 296 IAVLSCSDRLEDNASPECNLTPNCA--------------------YHMGEIAVSIRKGSF 335
I + RL DN S E + P YH+GE S++K +
Sbjct: 1031 IFLT----RLPDNVSDEISEEPGAVGMFEGNDLQGAHYKAEEIVQYHVGETVCSLQKATL 1086
Query: 336 IYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSE---------EYELLEAVQ 386
II T+ G I P S E L A
Sbjct: 1087 S----------------PGGSDAIIYGTMYGGIGALQPFVSREDVDFFLHLEMHLRGAAG 1130
Query: 387 ARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
AR P + G D FRS P V ++DGD+ F L+ ++Q+ +
Sbjct: 1131 AR-EHKPAGEGICGRDQLSFRSYYFP--VKDVVDGDLCETFNYLSPSRQKQI 1179
>gi|384490247|gb|EIE81469.1| hypothetical protein RO3G_06174 [Rhizopus delemar RA 99-880]
Length = 1197
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 117/296 (39%), Gaps = 53/296 (17%)
Query: 168 KLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVG 227
++ + E QLRL + P + PY LA G G + +R + +G
Sbjct: 906 RVVQGEQGQLRLHFIHKTP---IDDVPYA---MLAFQGRLLVGAG------KSLRIYDIG 953
Query: 228 RTRFM-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLV 276
+ + + I+ L R+ D ++ + + Y +L D R +
Sbjct: 954 KKKMLRKCETKSIPNCIVSLHTQGHRVIATDVQESVHYVIYKHADNRLVVFADDTIPRWM 1013
Query: 277 ADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECN--LTPNCAYHMGEIAVSIRKGS 334
++D +T D+ G+ V RL + S E + T N YH KG
Sbjct: 1014 TGSTMVDYETVAGGDKFGNFFV----SRLPGSISREVDEDTTGNRIYH--------EKGY 1061
Query: 335 FIYKLPADDAL-----GDCLASFESS------QTTIIASTLLGSIVIFIP-ISSEEYELL 382
D+L GD + S + + ++ ++ LG+I I++P +S E+ E
Sbjct: 1062 LQGAPNKIDSLCEYFTGDIITSLHKTTLLSGGREVVLTTSFLGAISIYVPFLSKEDVEFF 1121
Query: 383 EAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ ++ + PL G DH +RS P V ++DGD+ QF L + ++ +
Sbjct: 1122 QMLEMHMRAE--APPLAGRDHLLYRSYYIP--VKSVIDGDLCEQFNTLAAEKKRMI 1173
>gi|302654423|ref|XP_003019019.1| hypothetical protein TRV_07032 [Trichophyton verrucosum HKI 0517]
gi|291182709|gb|EFE38374.1| hypothetical protein TRV_07032 [Trichophyton verrucosum HKI 0517]
Length = 460
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 113/261 (43%), Gaps = 35/261 (13%)
Query: 219 QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILF--YSYHEDARKLEQIYCDPSQRLV 276
Q +R+ T +I+ L +RI V D ++ + + Y Y E+A L D R
Sbjct: 200 QLLRKCQAQITPRVIVGLQTQGSRIIVSDVQESVTYVVYKYQENA--LIPFADDIIPRWT 257
Query: 277 ADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFI 336
++D +T D+ G+I +L C + + A + G A I + ++
Sbjct: 258 TCTTMVDYETVAGGDKFGNIWLLRCPTKASEEADED-----------GSGAHLIHERQYL 306
Query: 337 YKLPADDAL------GDCLASFESSQTT------IIASTLLGSIVIFIP-ISSEEYELLE 383
P +L D S + +Q ++ + L G++ +F+P I+ ++ + +
Sbjct: 307 QGAPNRLSLVIHFYSQDIPTSIQKTQLVAGGRDILVWTGLQGTVGMFVPFITRDDVDFFQ 366
Query: 384 AVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV---LS 440
++ +LA PL G DH +R P ++DGD+ FL L + +++A+ L
Sbjct: 367 TLEMQLASQ--NPPLAGRDHLIYRGYYAPCK--GVIDGDLCETFLLLPNDKKQAIAGELD 422
Query: 441 FTLGSFDTIKASSKLPPSSPI 461
++ + + +PPS+ I
Sbjct: 423 RSVREIERKISVRTIPPSANI 443
>gi|403370717|gb|EJY85226.1| Spliceosomal protein sap, putative [Oxytricha trifallax]
Length = 1203
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 83/214 (38%), Gaps = 33/214 (15%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAV--- 298
RI GD ++ + Y + +L D R + L+D DT D+ ++ +
Sbjct: 983 RIYAGDLQESVHVLKYKPEDVQLYIFSDDILNRWLTSFCLLDHDTIAGVDKFENVFINRL 1042
Query: 299 -LSCSDRLEDNASP-------------ECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDA 344
+ C D ED+ + + P C + GE+ I+K S
Sbjct: 1043 PVGCEDDAEDDPTATKFKWENGYLNGAAFKMDPICQFFTGEVGTCIQKCSL--------- 1093
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHS 404
+ L+ S I+ T GS+ +P + E E+ V + + PL G DH
Sbjct: 1094 --NTLSGTNSE--IILFGTTSGSLGALLPFETRE-EIDFFVHLEMYLRIEAQPLCGRDHV 1148
Query: 405 EFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
FRS PV ++DGD+ QF L +Q +
Sbjct: 1149 TFRSSYVPV--KDVVDGDLCEQFASLEFNKQRVL 1180
>gi|384250802|gb|EIE24281.1| hypothetical protein COCSUDRAFT_28729 [Coccomyxa subellipsoidea
C-169]
Length = 1101
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 95/446 (21%), Positives = 163/446 (36%), Gaps = 91/446 (20%)
Query: 5 KRLNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSD-----ICCVDPLSGSVLSS 59
++L++R LG P+++ + SR +V+ + N T D + +D + L
Sbjct: 710 QKLHIRTVPLGEQPRRLAHQEASRSFLVLTSPNNGATGMDDAGPDSVRLLDDQTFETLDR 769
Query: 60 FKLELGETGKSMELVRVGHEQ--VLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQN 117
F LE E + + + VVGT AI + E E TKGR++V
Sbjct: 770 FGLETNEVCCAAASMSFSDDPCPYYVVGT------AITVAEEPEPTKGRILV-------- 815
Query: 118 SDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQL 177
F +K G S +E+ G A + ++ K ++E
Sbjct: 816 -------FGAKGGKLSLVCE--KEVKGAAYNLHPFQGKLIAGINSRVQLFKWTQSEDGSR 866
Query: 178 RLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLT 237
L + G VLA+ + V R F+I
Sbjct: 867 ELTNECSHVGHVLAL-------------------------------YIVTRGDFVI---- 891
Query: 238 AHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIA 297
VGD + Y D LE D + ++D DT + ++ +I
Sbjct: 892 -------VGDLMRSLQLLIYRADEGILEVRARDYKTHWMTAVEVLDDDTYLGAENSNNIF 944
Query: 298 VLSCSDRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESS 355
L + D A+ E L YH+G R GS + KLP +A +
Sbjct: 945 TLR---KNTDAAADEDRNRLETVGQYHLGVFVNRFRHGSLVMKLPDSEA---------AK 992
Query: 356 QTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRS-RENPVG 414
T++ T+ GSI + + ++++ L +Q + + + G H +R+ ++
Sbjct: 993 IPTVLFVTINGSIGVIASLPQQQFQFLSRLQD--CLRKVIKGVGGLSHVAWRTFQDEHTK 1050
Query: 415 VP--KILDGDMLSQFLELTSTQQEAV 438
+P +DGD++ QFL+L E V
Sbjct: 1051 MPSQNFVDGDLIEQFLDLKRDSMERV 1076
>gi|393245024|gb|EJD52535.1| hypothetical protein AURDEDRAFT_111199 [Auricularia delicata
TFB-10046 SS5]
Length = 1214
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 89/225 (39%), Gaps = 46/225 (20%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I L+ RI GD + I F Y +L D QR +++D +T V D+
Sbjct: 986 ITSLSTQGARIIAGDAQQSIFFCVYKAAENRLLVFADDSQQRWTTSQLMLDYNTVVAGDK 1045
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPN---------------------CAYHMGEIAVSIR 331
G++ V +RL D+ S + P C +H+G+I +S++
Sbjct: 1046 FGNVFV----NRLSDHVSNLVDDDPTGAGLLHEKGMFMGAPHKTSMLCHFHVGDIIMSLQ 1101
Query: 332 KGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLA 390
+ S + + I+ L G+I + +P +S E+ + ++ +
Sbjct: 1102 RTSLV----------------PGGREVIVYFGLHGTIGMLVPFASKEDVDFFTTLEQHMR 1145
Query: 391 IHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQ 435
L+ L+ D +R PV ++DGD+ F +L +Q
Sbjct: 1146 SENLS--LVSRDILAWRGYYVPVKA--VVDGDLCEYFAKLPQGKQ 1186
>gi|327309050|ref|XP_003239216.1| pre-mRNA splicing factor rse1 [Trichophyton rubrum CBS 118892]
gi|326459472|gb|EGD84925.1| pre-mRNA splicing factor rse1 [Trichophyton rubrum CBS 118892]
Length = 1209
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 102/235 (43%), Gaps = 32/235 (13%)
Query: 219 QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILF--YSYHEDARKLEQIYCDPSQRLV 276
Q +R+ T +I+ L +RI V D ++ + + Y Y E+A L D R
Sbjct: 968 QLLRKCQAQITPRVIVGLQTQGSRIIVSDVQESVTYVVYKYQENA--LISFADDIIPRWT 1025
Query: 277 ADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFI 336
++D +T D+ G+I +L C + + A + G A I + ++
Sbjct: 1026 TCTTMVDYETVAGGDKFGNIWLLRCPTKASEEADED-----------GSGAHLIHERQYL 1074
Query: 337 YKLPADDAL------GDCLASFESSQTT------IIASTLLGSIVIFIP-ISSEEYELLE 383
P +L D S + +Q ++ + L G++ +F+P I+ ++ + +
Sbjct: 1075 QGAPNRLSLVIHFYSQDIPTSIQKTQLVAGGRDILVWTGLQGTVGMFVPFITRDDVDFFQ 1134
Query: 384 AVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
++ +LA PL G DH +R P ++DGD+ FL L + +++A+
Sbjct: 1135 TLEMQLASQ--NPPLAGRDHLIYRGYYAP--CKGVIDGDLCETFLLLPNDKKQAI 1185
>gi|347829304|emb|CCD45001.1| similar to pre-mRNA-splicing factor rse1 [Botryotinia fuckeliana]
Length = 1212
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
MI+ L +RI V D ++ I Y +L D R + ++D +T D
Sbjct: 984 MIVGLQTQGSRIIVSDVQESITMVVYKFQENRLIPFVDDTIARWTSCTTMVDYETVAGGD 1043
Query: 292 RKGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMGEI-AVSIRKGSFIYKLPADDALGD 347
+ G++ +L C + + A E +L Y G +++ +F +P +
Sbjct: 1044 KFGNLWLLRCPAKASEEADEEGSGAHLLHERQYLAGAPHRLTLMAHNFSQDIPMSIQKTN 1103
Query: 348 CLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEF 406
+A + ++ S L G++ I IP +S E+ + + ++ L PL G DH +
Sbjct: 1104 LVAG---GRDCLLWSGLQGTLGILIPFVSREDVDFFQTLEQHLRSE--DPPLAGRDHLIY 1158
Query: 407 RSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
RS P V ++DGD+ ++ L + +++ +
Sbjct: 1159 RSYYVP--VKGVIDGDLCERYTLLPTDKKQMI 1188
>gi|302504585|ref|XP_003014251.1| hypothetical protein ARB_07556 [Arthroderma benhamiae CBS 112371]
gi|291177819|gb|EFE33611.1| hypothetical protein ARB_07556 [Arthroderma benhamiae CBS 112371]
Length = 460
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 102/235 (43%), Gaps = 32/235 (13%)
Query: 219 QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILF--YSYHEDARKLEQIYCDPSQRLV 276
Q +R+ T +I+ L +RI V D ++ + + Y Y E+A L D R
Sbjct: 200 QLLRKCQAQITPRVIVGLQTQGSRIIVSDVQESVTYVVYKYQENA--LIPFADDIIPRWT 257
Query: 277 ADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFI 336
++D +T D+ G+I +L C + + A + G A I + ++
Sbjct: 258 TCTTMVDYETVAGGDKFGNIWLLRCPTKASEEADED-----------GSGAHLIHERQYL 306
Query: 337 YKLPADDAL------GDCLASFESSQTT------IIASTLLGSIVIFIP-ISSEEYELLE 383
P +L D S + +Q ++ + L G++ +F+P I+ ++ + +
Sbjct: 307 QGAPNRLSLVIHFYSQDIPTSIQKTQLVAGGRDILVWTGLQGTVGMFVPFITRDDVDFFQ 366
Query: 384 AVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
++ +LA PL G DH +R P ++DGD+ FL L + +++A+
Sbjct: 367 TLEMQLASQ--NPPLAGRDHLIYRGYYAPCK--GVIDGDLCETFLLLPNDKKQAI 417
>gi|296417673|ref|XP_002838477.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634416|emb|CAZ82668.1| unnamed protein product [Tuber melanosporum]
Length = 1202
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 91/226 (40%), Gaps = 39/226 (17%)
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGS 295
L +RI V D ++ + + Y +L D R ++D +T DR G+
Sbjct: 978 LQTQGSRIIVSDVQESVTYVVYKYQDNRLIPFADDMIPRFTTCTTMVDYETVAGGDRFGN 1037
Query: 296 IAVLSCSDRLEDNASPE------------CNLTPN-----CAYHMGEIAVSIRKGSFIYK 338
++ C + D + + PN C ++ +I S++K +
Sbjct: 1038 FWIVRCPQKASDESDEDPAGGHLIHERSYLQGAPNRLNLMCHFYPQDIPTSVQKAQLV-- 1095
Query: 339 LPADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAP 397
+ T++ + L G+I + +P +S E+ + + ++ + AP
Sbjct: 1096 --------------TGGRDTLVWTGLQGTIGLMVPFVSREDVDFFQTLEQHMRTE--DAP 1139
Query: 398 LLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTL 443
+ G DH +RS P V ++DGD+ + L S ++A+++ L
Sbjct: 1140 IAGRDHLIYRSYYVP--VKGVIDGDLCENY-SLLSRDKKAMIAAEL 1182
>gi|301121252|ref|XP_002908353.1| DNA damage-binding protein, putative [Phytophthora infestans T30-4]
gi|262103384|gb|EEY61436.1| DNA damage-binding protein, putative [Phytophthora infestans T30-4]
Length = 1150
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 99/230 (43%), Gaps = 27/230 (11%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+++ + + I VGD I SY + +E+I D + ++ ++D DT + S+
Sbjct: 895 LVLYMESRGDFIVVGDLMKSISLLSYKQLDGTIEEIAKDLNSNWMSAVGIVDDDTYIGSE 954
Query: 292 RKGSIAVLSCSDRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADD------ 343
++ + R AS E L +H+GE R GS + + +
Sbjct: 955 TDFNLFTVQ---RNSGAASDEERGRLETVGEFHLGEFVNRFRYGSLVMQNSSSTSQTPSG 1011
Query: 344 -------ALGDCLASFESS----QTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIH 392
A+ D S ++ +++ T+ G I + +PIS ++Y L VQ A+
Sbjct: 1012 VVSTGPTAMVDVGESAPAAPVVQNQSMLFGTVSGMIGVILPISKDQYSFLLRVQQ--ALT 1069
Query: 393 PLTAPLLGNDHSEFRSRENPVGVPK---ILDGDMLSQFLELTSTQQEAVL 439
+ + G H ++R+ EN V + +DGD++ FL+L Q V+
Sbjct: 1070 HVVKGVGGFSHKDWRTFENRRSVSEARNFIDGDLVESFLDLPKPQMTKVV 1119
>gi|449519304|ref|XP_004166675.1| PREDICTED: DNA damage-binding protein 1a-like [Cucumis sativus]
Length = 596
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 17/200 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E+ D + ++ ++D D + ++ ++ V
Sbjct: 388 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENYFNLFTVRKN 447
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
S+ D + YH+GE + GS + +LP D T+I
Sbjct: 448 SEGATDEERSRLEVVGE--YHLGEFVNRFQHGSLVMRLPDSDV---------GQIPTVIF 496
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP---VGVPKI 418
++ G I + + ++Y LE +Q+ L + + G H ++RS N
Sbjct: 497 GSVNGVIGVIASLPHDQYVFLERLQSNL--RKVIKGVGGLSHEQWRSFNNEKRTAEAKNF 554
Query: 419 LDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L ++ E +
Sbjct: 555 LDGDLIESFLDLNRSKMEEI 574
>gi|326483043|gb|EGE07053.1| pre-mRNA-splicing factor rse1 [Trichophyton equinum CBS 127.97]
Length = 1209
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 102/235 (43%), Gaps = 32/235 (13%)
Query: 219 QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILF--YSYHEDARKLEQIYCDPSQRLV 276
Q +R+ T +I+ L +RI V D ++ + + Y Y E+A L D R
Sbjct: 968 QLLRKCQAQITPRVIVGLQTQGSRIIVSDVQESVTYVVYKYQENA--LIPFADDIIPRWT 1025
Query: 277 ADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFI 336
++D +T D+ G+I +L C + + A + G A I + ++
Sbjct: 1026 TCTTMVDYETVAGGDKFGNIWLLRCPTKASEEADED-----------GSGAHLIHERQYL 1074
Query: 337 YKLPADDAL------GDCLASFESSQTT------IIASTLLGSIVIFIP-ISSEEYELLE 383
P +L D S + +Q ++ + L G++ +F+P I+ ++ + +
Sbjct: 1075 QGAPNRLSLVIHFYSQDIPTSIQKTQLVAGGRDILVWTGLQGTVGMFVPFITRDDVDFFQ 1134
Query: 384 AVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
++ +LA PL G DH +R P ++DGD+ FL L + +++A+
Sbjct: 1135 TLEMQLASQ--NPPLAGRDHLIYRGYYAP--CKGVIDGDLCETFLLLPNDKKQAI 1185
>gi|89632640|gb|ABD77552.1| splicing factor 3b subunit 3 [Ictalurus punctatus]
Length = 131
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 21/119 (17%)
Query: 321 YHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEY 379
YH+GE A+S++K + I +++ +TL G I I +P +S E++
Sbjct: 9 YHIGETALSLQKTTLI----------------PGGSESLVYTTLSGGIGILVPFTSHEDH 52
Query: 380 ELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ + ++ + PL G DH FRS PV ++DGD+ QF + +Q++V
Sbjct: 53 DFFQHLEMHMRSE--FPPLCGRDHLSFRSYYFPVK--NVIDGDLCEQFNSMDPHKQKSV 107
>gi|326469377|gb|EGD93386.1| splicing factor 3B subunit 3 [Trichophyton tonsurans CBS 112818]
Length = 1188
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 102/235 (43%), Gaps = 32/235 (13%)
Query: 219 QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILF--YSYHEDARKLEQIYCDPSQRLV 276
Q +R+ T +I+ L +RI V D ++ + + Y Y E+A L D R
Sbjct: 947 QLLRKCQAQITPRVIVGLQTQGSRIIVSDVQESVTYVVYKYQENA--LIPFADDIIPRWT 1004
Query: 277 ADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFI 336
++D +T D+ G+I +L C + + A + G A I + ++
Sbjct: 1005 TCTTMVDYETVAGGDKFGNIWLLRCPTKASEEADED-----------GSGAHLIHERQYL 1053
Query: 337 YKLPADDAL------GDCLASFESSQTT------IIASTLLGSIVIFIP-ISSEEYELLE 383
P +L D S + +Q ++ + L G++ +F+P I+ ++ + +
Sbjct: 1054 QGAPNRLSLVIHFYSQDIPTSIQKTQLVAGGRDILVWTGLQGTVGMFVPFITRDDVDFFQ 1113
Query: 384 AVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
++ +LA PL G DH +R P ++DGD+ FL L + +++A+
Sbjct: 1114 TLEMQLASQ--NPPLAGRDHLIYRGYYAP--CKGVIDGDLCETFLLLPNDKKQAI 1164
>gi|449435512|ref|XP_004135539.1| PREDICTED: DNA damage-binding protein 1-like [Cucumis sativus]
Length = 1093
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 17/200 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E+ D + ++ ++D D + ++ ++ V
Sbjct: 885 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENYFNLFTVRKN 944
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
S+ D + YH+GE + GS + +LP D T+I
Sbjct: 945 SEGATDEERSRLEVVGE--YHLGEFVNRFQHGSLVMRLPDSDV---------GQIPTVIF 993
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP---VGVPKI 418
++ G I + + ++Y LE +Q+ L + + G H ++RS N
Sbjct: 994 GSVNGVIGVIASLPHDQYVFLERLQSNL--RKVIKGVGGLSHEQWRSFNNEKRTAEAKNF 1051
Query: 419 LDGDMLSQFLELTSTQQEAV 438
LDGD++ FL+L ++ E +
Sbjct: 1052 LDGDLIESFLDLNRSKMEEI 1071
>gi|448111975|ref|XP_004201977.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
gi|359464966|emb|CCE88671.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
Length = 1249
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 86/222 (38%), Gaps = 45/222 (20%)
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
RI D F Y + + + D +R + +D DT V D+ G++ V
Sbjct: 1019 NRIMAADASMSSTFVKYDQVENQFFPLADDVMKRKITSMCPLDYDTIVGGDKFGNVFVSR 1078
Query: 301 CSDRLEDNASPECNLTPN---------------CAYHMGEIAVSIRKGSFIYKLPADDAL 345
+ L + L + C ++ G+I S KGS I L
Sbjct: 1079 IPEFLSKQVDQDWGLIRHQDSYLNGAASRLKNLCEFYSGDIPTSFSKGSLI--------L 1130
Query: 346 GDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIH-----------P 393
G S+ +I + L+G++ IP ++ E + ++A L +
Sbjct: 1131 G--------SEESIFYTGLMGTVGALIPLVTKNEVQFFIELEAELRSYFDYNFDNFDEQK 1182
Query: 394 LTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQ 435
LLG DH + RS NP V ++DGD++ +F E++ +
Sbjct: 1183 NGHNLLGKDHLKHRSYYNP--VKNVIDGDLIERFSEVSYNNK 1222
>gi|118400837|ref|XP_001032740.1| CPSF A subunit region family protein [Tetrahymena thermophila]
gi|89287084|gb|EAR85077.1| CPSF A subunit region family protein [Tetrahymena thermophila SB210]
Length = 1197
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 19/120 (15%)
Query: 319 CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE 378
C ++ GE+ +++K S + + ++ T +GSI ++P ++E
Sbjct: 1074 CHFYAGEVITTLQKASLV----------------STGNEIVLYGTSMGSIGAYLPFQTKE 1117
Query: 379 YELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
++ + + + PL G DH FRS PV ++DGD+ QF++L+S +Q+ +
Sbjct: 1118 -DIDFFIHLEMYLRLDVLPLAGRDHVMFRSFYGPV--KSVIDGDLCEQFIKLSSGKQKVL 1174
>gi|432863837|ref|XP_004070177.1| PREDICTED: splicing factor 3B subunit 3-like [Oryzias latipes]
Length = 1146
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 32/183 (17%)
Query: 263 KLEQIYCDPSQRLVADC---VLMDVDTA--VVSDRKGSIAVLSCSDR-LEDNASPECNLT 316
KL +IY ++L+ C V + +T+ V D G+ A+ DR L + AS + +
Sbjct: 965 KLLRIYDLGKKKLLRKCENKVRLPPNTSDDVDEDPTGNKALW---DRGLLNGASQKAEVV 1021
Query: 317 PNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS 376
N YH+GE +S++K + I +++ +TL G I I +P +S
Sbjct: 1022 VN--YHVGETVLSLQKTTLI----------------PGGSESLVYTTLSGGIGILVPFTS 1063
Query: 377 -EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQ 435
E+++ + ++ + + P+ G DH FRS PV ++DGD+ QF + + +Q
Sbjct: 1064 HEDHDFFQHLE--MHMRSEFPPICGRDHLSFRSYYFPV--KNVIDGDLCEQFNSMDTHKQ 1119
Query: 436 EAV 438
++V
Sbjct: 1120 KSV 1122
>gi|350630003|gb|EHA18376.1| hypothetical protein ASPNIDRAFT_38018 [Aspergillus niger ATCC 1015]
Length = 1219
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 86/208 (41%), Gaps = 22/208 (10%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 982 IVGLQTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTATTMVDYETTAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMG-----EIAVSIRKGSFIYKLPADDA 344
G++ +L C + + A + +L Y G E+ + + + +P
Sbjct: 1042 FGNLWLLRCPKKTSEEADEDGSGAHLIHERGYLQGTPNRLELMIHV----YTQDIPTSLH 1097
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAI-HPLTAPLLGND 402
+A + ++ + G+I + +P I E+ + + ++ +LA HP PL G D
Sbjct: 1098 KTQLVAG---GRDILVWTGFQGTIGMLVPFIGREDVDFFQNLEMQLAAQHP---PLAGRD 1151
Query: 403 HSEFRSRENPVGVPKILDGDMLSQFLEL 430
H +RS P V ++DGD+ + L
Sbjct: 1152 HLIYRSYYAP--VKGVIDGDLCEMYFLL 1177
>gi|340508225|gb|EGR33979.1| splicing factor subunit 130kda, putative [Ichthyophthirius
multifiliis]
Length = 983
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 88/219 (40%), Gaps = 46/219 (21%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
RI V D + + + + ++ D R ++ ++D T + D+ ++ V C
Sbjct: 766 RIFVSMVGDAVHIMKHKQKEQTFYEVCDDVLPRWMSAFQVLDYSTYIGGDKFENMFV--C 823
Query: 302 SDRLEDNASPECNLTPN---------------------CAYHMGEIAVSIRKGSFIYKLP 340
R+ NA E + P C +++GE+ + +K
Sbjct: 824 --RIPQNAEEEMDENPMSYKLRWESGYLNGAPYKTEQICQFYVGEVVTTFQKA------- 874
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPI-SSEEYELLEAVQARLAIHPLTAPLL 399
CL S + II T +GSI F P + E+ + ++ L I L PL
Sbjct: 875 -------CLVS--TGNECIIYGTSMGSIGAFYPFQTKEDIDFFVHLEMYLRIDVL--PLA 923
Query: 400 GNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH FR+ PV ++DGD+ QF+ + +Q+ +
Sbjct: 924 GRDHVMFRAFYGPV--KSVIDGDLCEQFMRIGQGKQKVL 960
>gi|145240731|ref|XP_001393012.1| pre-mRNA-splicing factor rse1 [Aspergillus niger CBS 513.88]
gi|134077536|emb|CAK96680.1| unnamed protein product [Aspergillus niger]
Length = 1209
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 86/208 (41%), Gaps = 22/208 (10%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 982 IVGLQTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTATTMVDYETTAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMG-----EIAVSIRKGSFIYKLPADDA 344
G++ +L C + + A + +L Y G E+ + + + +P
Sbjct: 1042 FGNLWLLRCPKKTSEEADEDGSGAHLIHERGYLQGTPNRLELMIHV----YTQDIPTSLH 1097
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAI-HPLTAPLLGND 402
+A + ++ + G+I + +P I E+ + + ++ +LA HP PL G D
Sbjct: 1098 KTQLVAG---GRDILVWTGFQGTIGMLVPFIGREDVDFFQNLEMQLAAQHP---PLAGRD 1151
Query: 403 HSEFRSRENPVGVPKILDGDMLSQFLEL 430
H +RS P V ++DGD+ + L
Sbjct: 1152 HLIYRSYYAP--VKGVIDGDLCEMYFLL 1177
>gi|154419018|ref|XP_001582526.1| CPSF A subunit region family protein [Trichomonas vaginalis G3]
gi|121916762|gb|EAY21540.1| CPSF A subunit region family protein [Trichomonas vaginalis G3]
Length = 1142
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 106/254 (41%), Gaps = 33/254 (12%)
Query: 226 VGRTRFM-----------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQR 274
VGRT+ + I L A TRI GD + F + ++ L D R
Sbjct: 900 VGRTKLLKKCCSKAFPHCINYLKAFGTRIIAGDAMESFHFVKFDKEEDILSIFADDMVPR 959
Query: 275 LVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEI-----AVS 329
+ +D T D+ GS +L RL + + + + P+ H E A +
Sbjct: 960 HPLSAIGLDRSTVCCGDKFGSFCIL----RLPPDINDDAEIDPSDVGHAFENEKFPGAKN 1015
Query: 330 IRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE----YELLEAV 385
+ S +Y + G CL+ + T+I+ T+ G I +FIP+ ++ + LLE
Sbjct: 1016 KVELSNMYHI-GSPITGLCLSQGDFENTSIVYGTVDGEIGLFIPLKTDTDARLFRLLEDE 1074
Query: 386 QARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLEL-TSTQQEAVLSFTLG 444
+L P +G +FRS P+ + D ++L +++L T+ Q+E +
Sbjct: 1075 MKKLIKSP-----VGRFIEQFRSYYTPLKC--VNDSNLLLSYIDLPTNLQKEIAEKLKVK 1127
Query: 445 SFDTIKASSKLPPS 458
FD + +K+ S
Sbjct: 1128 PFDLSRLLAKVDSS 1141
>gi|358366518|dbj|GAA83139.1| nuclear mRNA splicing factor [Aspergillus kawachii IFO 4308]
Length = 1209
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 86/208 (41%), Gaps = 22/208 (10%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 982 IVGLQTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTATTMVDYETTAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMG-----EIAVSIRKGSFIYKLPADDA 344
G++ +L C + + A + +L Y G E+ + + + +P
Sbjct: 1042 FGNLWLLRCPKKTSEEADEDGSGAHLIHERGYLQGTPNRLELMIHV----YTQDIPTSLH 1097
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAI-HPLTAPLLGND 402
+A + ++ + G+I + +P I E+ + + ++ +LA HP PL G D
Sbjct: 1098 KTQLVAG---GRDILVWTGFQGTIGMLVPFIGREDVDFFQNLEMQLAAQHP---PLAGRD 1151
Query: 403 HSEFRSRENPVGVPKILDGDMLSQFLEL 430
H +RS P V ++DGD+ + L
Sbjct: 1152 HLIYRSYYAP--VKGVIDGDLCEMYFLL 1177
>gi|449296290|gb|EMC92310.1| hypothetical protein BAUCODRAFT_151722 [Baudoinia compniacensis UAMH
10762]
Length = 1224
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
R+ D + I + + ++ D QR ++D +T+ D+ G++ V+
Sbjct: 1005 NRLICADVSESITYVVFKPKHNRMIGFVDDVIQRWTTTAAMIDYETSAGGDKFGNLWVVR 1064
Query: 301 CSDRLEDNASPEC--NLTPNCAYHMG--EIAVSIRKGSFIYKLPADDALGDCLASFESSQ 356
C ++ + E N ++G + +R F +P +A Q
Sbjct: 1065 CPEQASKESDEEGLGGYIVNERSYLGGAPYRLELRSHFFTQDIPMSIQRTALVAG---GQ 1121
Query: 357 TTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGV 415
+ S L G++ + +P +S E+ E Q I PL G DH +RS P V
Sbjct: 1122 EVLFWSGLQGTLGMLVPFVSREDVEFF--TQLETLIRAEEPPLAGRDHLMYRSYYVP--V 1177
Query: 416 PKILDGDMLSQFLELTSTQQEAV 438
++DGD+ +F++L+ ++ +
Sbjct: 1178 KGVIDGDLCERFMKLSFDGKQKI 1200
>gi|115390120|ref|XP_001212565.1| splicing factor 3B subunit 3 [Aspergillus terreus NIH2624]
gi|114194961|gb|EAU36661.1| splicing factor 3B subunit 3 [Aspergillus terreus NIH2624]
Length = 1217
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 87/212 (41%), Gaps = 30/212 (14%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 982 IVGLQTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSISRWTTSTTMVDYETVAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDAL------G 346
G++ ++ C ++ + A + G A I + +++ P L
Sbjct: 1042 FGNLWLVRCPKKVSEQADED-----------GSGAHLIHERGYLHGTPNRLELMIHVYTQ 1090
Query: 347 DCLASFESSQTT------IIASTLLGSIVIFIP-ISSEEYELLEAVQARLA-IHPLTAPL 398
D S +Q ++ + G+I + +P +S E+ + + ++ +LA HP PL
Sbjct: 1091 DIPTSLHKTQLVAGGRDILVWTGFHGTIGMLVPFVSREDVDFFQNLEMQLASQHP---PL 1147
Query: 399 LGNDHSEFRSRENPVGVPKILDGDMLSQFLEL 430
G DH +RS P V ++DGD+ + L
Sbjct: 1148 AGRDHLIYRSYYAP--VKGVIDGDLCETYFLL 1177
>gi|321249291|ref|XP_003191408.1| U2 snRNA binding protein [Cryptococcus gattii WM276]
gi|317457875|gb|ADV19621.1| U2 snRNA binding protein, putative [Cryptococcus gattii WM276]
Length = 1217
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 95/221 (42%), Gaps = 27/221 (12%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL-MDVDTAVVSD 291
++ + RI VGD ++ + Y + I+ D SQ CV +D +T D
Sbjct: 989 VVTINVQGARIIVGDMQESTFYCVYRSIPTRQLLIFADDSQPRWITCVTSVDYETVACGD 1048
Query: 292 RKGSIAV----LSCSDRLEDNASPECNLTPNC----AYHMGEIAVSIRKGSF---IYKLP 340
+ G+I + S S++++D+ + L A H E+ GS I K+P
Sbjct: 1049 KFGNIFINRLDPSISEKVDDDPTGATILHEKSFLMGAAHKTEMIAHYNIGSVVTSITKIP 1108
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLL 399
+ ++ +T+ G++ +P +S ++ E + ++ + ++ L+
Sbjct: 1109 L----------VAGGRDVLVYTTISGAVGALVPFVSPDDIEFMSTLEMHMRTQDIS--LV 1156
Query: 400 GNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLS 440
G DH +R P + ++DGD+ F L +Q+A+ S
Sbjct: 1157 GRDHIAYRGYYVP--IKGVVDGDLCESFSLLPYPKQQAIAS 1195
>gi|58258783|ref|XP_566804.1| U2 snRNA binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|338819361|sp|P0CR23.1|RSE1_CRYNB RecName: Full=Pre-mRNA-splicing factor RSE1
gi|338819362|sp|P0CR22.1|RSE1_CRYNJ RecName: Full=Pre-mRNA-splicing factor RSE1
gi|57222941|gb|AAW40985.1| U2 snRNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1217
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 95/219 (43%), Gaps = 27/219 (12%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL-MDVDTAVVSD 291
++ + RI VGD ++ + Y + I+ D SQ CV +D +T D
Sbjct: 989 VVTINVQGARIIVGDMQESTFYCVYRSIPTRQLLIFADDSQPRWITCVTSVDYETVACGD 1048
Query: 292 RKGSIAV----LSCSDRLEDNASPECNLTPNC----AYHMGEIAVSIRKGSF---IYKLP 340
+ G+I + S S++++D+ + L A H E+ GS I K+P
Sbjct: 1049 KFGNIFINRLDPSISEKVDDDPTGATILHEKSFLMGAAHKTEMIGHYNIGSVVTSITKIP 1108
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLL 399
+ ++ +T+ G++ +P +SS++ E + ++ + ++ L+
Sbjct: 1109 L----------VAGGRDVLVYTTISGAVGALVPFVSSDDIEFMSTLEMHMRTQDIS--LV 1156
Query: 400 GNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH +R P + ++DGD+ F L +Q+A+
Sbjct: 1157 GRDHIAYRGYYVP--IKGVVDGDLCESFSLLPYPKQQAI 1193
>gi|134106833|ref|XP_777958.1| hypothetical protein CNBA4270 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260658|gb|EAL23311.1| hypothetical protein CNBA4270 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1218
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 95/219 (43%), Gaps = 27/219 (12%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL-MDVDTAVVSD 291
++ + RI VGD ++ + Y + I+ D SQ CV +D +T D
Sbjct: 990 VVTINVQGARIIVGDMQESTFYCVYRSIPTRQLLIFADDSQPRWITCVTSVDYETVACGD 1049
Query: 292 RKGSIAV----LSCSDRLEDNASPECNLTPNC----AYHMGEIAVSIRKGSF---IYKLP 340
+ G+I + S S++++D+ + L A H E+ GS I K+P
Sbjct: 1050 KFGNIFINRLDPSISEKVDDDPTGATILHEKSFLMGAAHKTEMIGHYNIGSVVTSITKIP 1109
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLL 399
+ ++ +T+ G++ +P +SS++ E + ++ + ++ L+
Sbjct: 1110 L----------VAGGRDVLVYTTISGAVGALVPFVSSDDIEFMSTLEMHMRTQDIS--LV 1157
Query: 400 GNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH +R P + ++DGD+ F L +Q+A+
Sbjct: 1158 GRDHIAYRGYYVP--IKGVVDGDLCESFSLLPYPKQQAI 1194
>gi|261329035|emb|CBH12013.1| damage-specific DNA binding protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 1270
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 74/193 (38%), Gaps = 26/193 (13%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDV----DTA 287
+I ++ + I D R F L + DP R V DC ++ D
Sbjct: 949 LIPVMQKEVSYIVASDARHSCFFVRIDTIQGSLNIVARDPELRGVMDCAILQYESRHDVC 1008
Query: 288 VVSDRKGSIAV-----LSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSF------- 335
+ D V L+ S + A P L + YHMG++ + +GSF
Sbjct: 1009 LGDDLFNFFCVSHVEPLANSSGVSAPAMPTKKLQTSAQYHMGDLITVMHQGSFAPCSVLN 1068
Query: 336 -IYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPL 394
+ +PA G C I+ T G+ PISSE + LL+ ++ +A +
Sbjct: 1069 DVVPIPATLVRGVC-------GPQIVYGTSHGAFGAITPISSETFILLKGLEVSVA--SV 1119
Query: 395 TAPLLGNDHSEFR 407
PL G H+ FR
Sbjct: 1120 VPPLGGFTHASFR 1132
>gi|159486547|ref|XP_001701300.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
gi|158271783|gb|EDO97595.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
Length = 1078
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 92/228 (40%), Gaps = 38/228 (16%)
Query: 229 TRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAV 288
R+ + L F R ++ + Y + D + R ++ + +D DT
Sbjct: 848 NRWTNIFLHVFFYRPYFRSSQESVHMMRYKKADNAFYIFADDVAPRYLSALLPLDYDTIA 907
Query: 289 VSDRKGSIAVL----SCSDRLEDN--------ASPECNLTPN-----CAYHMGEIAVSIR 331
D+ G++ +L S ++ED+ AS + N P+ +H+G+ +++
Sbjct: 908 TGDKFGNLVILRLPQEASQQVEDDPTGGKMAAASGKLNGAPHKLEELVKFHVGDTITALQ 967
Query: 332 KGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLA 390
+ Q ++ ST++G+I + P +S E+ + ++ L
Sbjct: 968 RAEMQ----------------AGGQEVLVYSTVMGAIGVVYPFTSREDVDFFSHLEMHLR 1011
Query: 391 IHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
PL G DH +RS P V +DGD+ SQ+ + +Q+ +
Sbjct: 1012 QE--NPPLAGRDHLAYRSAYFP--VRNCVDGDLCSQYASIPMKKQQMI 1055
>gi|190345965|gb|EDK37945.2| hypothetical protein PGUG_02043 [Meyerozyma guilliermondii ATCC 6260]
Length = 1206
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 80/204 (39%), Gaps = 21/204 (10%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
RI VGD + F Y D +R + +D DT + D+ G++ V
Sbjct: 977 RIVVGDGSNSTTFLKYDSSDNIFVSFADDVMKRHITALECLDHDTVIGGDKFGNVFVNRI 1036
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKG---SFIYKLPADDALGDCLASFESSQTT 358
L A E +L +++ A + KG F+ +P G + + S
Sbjct: 1037 PFTLSKQADQEWSLVKYQDHYLNS-AGNRSKGLCEFFLQDIPTSFFKGTLVTGGKES--- 1092
Query: 359 IIASTLLGSIVIFIP-ISSEEYELLEAVQ--ARLAIHP---------LTAPLLGNDHSEF 406
I + L GS+ F P IS E A++ R + P L LLG D +F
Sbjct: 1093 IFYTGLCGSLGFFEPLISKSEVSFFTALENSIRKVLDPNLEEHDKKRLYCQLLGKDQLKF 1152
Query: 407 RSRENPVGVPKILDGDMLSQFLEL 430
R NP V ++DGD + + EL
Sbjct: 1153 RGYYNP--VKNVIDGDFVEYYFEL 1174
>gi|443707495|gb|ELU03057.1| hypothetical protein CAPTEDRAFT_148808 [Capitella teleta]
Length = 1084
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 20/203 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC- 301
I VGD + SY E+I D + + ++D DT + ++ S + +C
Sbjct: 865 ILVGDLMRSVTLLSYKPMEGCFEEIARDYNPNWMTSIDVLDDDTFLGAEN--SFNIFTCQ 922
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
D +L YH+GE R GS + + P G+C + +Q +++
Sbjct: 923 KDSAATTDEERQHLQEVGLYHLGEFVNVFRHGSLVMQHP-----GECTS---PTQGSVLF 974
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLA-----IHPLTAPLLGNDHSEFRSRENPVGVP 416
T+ G++ + + E Y L VQ +LA + + + H+E R E G
Sbjct: 975 GTVNGALGLVTQLPQEFYLFLLEVQNKLAKTIKSVGKVEHAFWRSFHTE-RKTEPATG-- 1031
Query: 417 KILDGDMLSQFLELTSTQQEAVL 439
+DGD++ FL+L+ + + V+
Sbjct: 1032 -FIDGDLIESFLDLSRDKMQEVV 1053
>gi|72390667|ref|XP_845628.1| damage-specific DNA binding protein [Trypanosoma brucei TREU927]
gi|62359843|gb|AAX80271.1| damage-specific DNA binding protein, putative [Trypanosoma brucei]
gi|70802163|gb|AAZ12069.1| damage-specific DNA binding protein, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 1270
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 73/193 (37%), Gaps = 26/193 (13%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDV----DTA 287
+I ++ + I D R F L + DP R V DC ++ D
Sbjct: 949 LIPVMQKEVSYIVASDARHSCFFVRIDTIQGSLNIVARDPELRGVMDCAILQYESRHDVC 1008
Query: 288 VVSDRKGSIAV-----LSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSF------- 335
+ D V L+ S + A P L YHMG++ + +GSF
Sbjct: 1009 LGDDLFNFFCVSHVEPLANSSGVSAPAMPTKKLQTTAQYHMGDLITVMHQGSFAPCSVLN 1068
Query: 336 -IYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPL 394
+ +PA G C I+ T G+ PISSE + LL+ ++ +A +
Sbjct: 1069 DVVPIPATLVRGVC-------GPQIVYGTSHGAFGAITPISSETFILLKGLEVSVA--SV 1119
Query: 395 TAPLLGNDHSEFR 407
PL G H+ FR
Sbjct: 1120 VPPLGGFTHASFR 1132
>gi|396488712|ref|XP_003842924.1| similar to pre-mRNA splicing factor 3b [Leptosphaeria maculans JN3]
gi|312219502|emb|CBX99445.1| similar to pre-mRNA splicing factor 3b [Leptosphaeria maculans JN3]
Length = 1236
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 96/226 (42%), Gaps = 42/226 (18%)
Query: 241 TRIAVGDCRDGILFYSYHEDA---RKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIA 297
+R+ V D + Y H+D +L D R + ++D +T V D+ G+I
Sbjct: 1012 SRLVVSDQAQSVT-YVVHKDQVHPNRLIPFADDTVPRHTSASDMLDYETTVGGDKFGNIW 1070
Query: 298 VLSCSDRLED--NASPE----------CNLTPN-----CAYHMGEIAVSIRKGSFIYKLP 340
++ C ++ + + SP+ TPN Y +I VSI+K +
Sbjct: 1071 LVRCPPKVSEASDESPDGSDLLVDKSFLGGTPNRLDLVAHYFANDIPVSIQKTVLL---- 1126
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSE-EYELLEAVQARLAIHPLTAPLL 399
+ I + L G++ IP +S ++++ + Q L + PL
Sbjct: 1127 ------------SGGERIIFWAGLQGTLGALIPFNSRRQHKMFQ--QLELQLRQDDKPLS 1172
Query: 400 GNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGS 445
G DH +RS PV ++DGD++ +FL L+ ++E++ G+
Sbjct: 1173 GRDHLAYRSYFAPVKC--VIDGDLIERFLVLSRDKRESIAGQMTGA 1216
>gi|405117821|gb|AFR92596.1| pre-mRNA-splicing factor RSE1 [Cryptococcus neoformans var. grubii
H99]
Length = 1217
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 94/219 (42%), Gaps = 27/219 (12%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL-MDVDTAVVSD 291
++ + RI VGD ++ + Y + I+ D SQ CV +D +T D
Sbjct: 989 VVTINVQGARIIVGDMQESTFYCVYRSIPTRQLLIFADDSQPRWITCVTSVDYETVACGD 1048
Query: 292 RKGSIAV----LSCSDRLEDNASPECNLTPNC----AYHMGEIAVSIRKGSF---IYKLP 340
+ G+I + S S++++D+ + L A H E+ GS I K+P
Sbjct: 1049 KFGNIFINRLDPSISEKVDDDPTGATILHEKSFLMGAAHKTEMIAHYNIGSVVTSITKIP 1108
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLL 399
+ ++ +T+ G++ +P +SS++ E + ++ + ++ +
Sbjct: 1109 L----------VAGGRDVLVYTTISGAVGALVPFVSSDDIEFMSTLEMHMRTQDISP--V 1156
Query: 400 GNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
G DH +R P + ++DGD+ F L +Q+A+
Sbjct: 1157 GRDHIAYRGYYVP--IKGVVDGDLCESFSLLPYPKQQAI 1193
>gi|166240328|ref|XP_637896.2| UV-damaged DNA binding protein1 [Dictyostelium discoideum AX4]
gi|238064940|sp|B0M0P5.1|DDB1_DICDI RecName: Full=DNA damage-binding protein 1; AltName: Full=DNA repair
protein E; AltName: Full=UV-damaged DNA-binding protein 1
gi|165988543|gb|EAL64385.2| UV-damaged DNA binding protein1 [Dictyostelium discoideum AX4]
Length = 1181
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 17/214 (7%)
Query: 225 AVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDV 284
+V + MI+ L + I VGD + D LEQI +P + +++
Sbjct: 956 SVHKGHTMILKLASRGHFILVGDMMKSMSLLVEQSDG-SLEQIARNPQPIWIRSVAMIND 1014
Query: 285 DTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDA 344
D + ++ + V+ ++ + E L YH+GE S+R GS + +LP D
Sbjct: 1015 DYFIGAEASNNFIVVKKNNDSTNELEREL-LDSVGHYHIGESINSMRHGSLV-RLPDSD- 1071
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHS 404
+ TI+ +++ GSI + IS E++ +Q ++ + + G H
Sbjct: 1072 --------QPIIPTILYASVNGSIGVVASISEEDFIFFSKLQK--GLNQVVRGVGGFSHE 1121
Query: 405 EFRSREN---PVGVPKILDGDMLSQFLELTSTQQ 435
+R+ N + +DGD++ FL+L Q
Sbjct: 1122 TWRAFSNDHHTIDSKNFIDGDLIETFLDLKYESQ 1155
>gi|392580116|gb|EIW73243.1| hypothetical protein TREMEDRAFT_37240 [Tremella mesenterica DSM 1558]
Length = 1214
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVL-MDVDTAVVSDRKGSIAVLS 300
RI VGD ++ F Y + ++ D +Q CV +D DT D+ G++ V
Sbjct: 995 RIIVGDMQESTFFCVYRSIPTRQLLVFGDDTQPRFLTCVTNVDYDTVACGDKFGNVFV-- 1052
Query: 301 CSDRLEDNASPECNLTPNCA---YHMGEIAVSIRKGSFIYKLPADDALGDCLASFE---- 353
+R++ S + + P A + G + + K + I A +G + S
Sbjct: 1053 --NRMDQAVSEKVDDDPTGAGILHEKGFLMGAAHKTTLI----AHYQVGSVVTSLTKVSL 1106
Query: 354 --SSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRE 410
+ ++ +T+ G++ +P IS ++ E + ++ + ++ L+G DH +R
Sbjct: 1107 VPGGRDVLVYTTISGAVGALVPFISMDDVEFMTTLEMHMRSQNIS--LVGRDHLAYRGYY 1164
Query: 411 NPVGVPKILDGDMLSQFLELTSTQQEAV 438
PV ++DGD+ + L T+Q ++
Sbjct: 1165 APVM--GVVDGDLCDAYSSLPYTKQSSI 1190
>gi|1399512|gb|AAC47162.1| repE [Dictyostelium discoideum]
Length = 1139
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 17/214 (7%)
Query: 225 AVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDV 284
+V + MI+ L + I VGD + D LEQI +P + +++
Sbjct: 914 SVHKGHTMILKLASRGHFILVGDMMKSMSLLVEQSDG-SLEQIARNPQPIWIRSVAMIND 972
Query: 285 DTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDA 344
D + ++ + V+ ++ + E L YH+GE S+R GS + +LP D
Sbjct: 973 DYFIGAEASNNFIVVKKNNDSTNELEREL-LDSVGHYHIGESINSMRHGSLV-RLPDSD- 1029
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHS 404
+ TI+ +++ GSI + IS E++ +Q ++ + + G H
Sbjct: 1030 --------QPIIPTILYASVNGSIGVVASISEEDFIFFSKLQK--GLNQVVRGVGGFSHE 1079
Query: 405 EFRSREN---PVGVPKILDGDMLSQFLELTSTQQ 435
+R+ N + +DGD++ FL+L Q
Sbjct: 1080 TWRAFSNDHHTIDSKNFIDGDLIETFLDLKYESQ 1113
>gi|239611898|gb|EEQ88885.1| protein CFT1 [Ajellomyces dermatitidis ER-3]
gi|327352847|gb|EGE81704.1| CFT1 [Ajellomyces dermatitidis ATCC 18188]
Length = 1402
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 15/210 (7%)
Query: 245 VGDCRDGILFYSYHEDARKLEQIYCDPS--QRLVADCVLMDVDT--AVVSDRKGSIAVLS 300
+GD GI F Y E+ KL D Q + AD L D +V+D +I VL
Sbjct: 1179 MGDALKGIWFAGYSEEPYKLSLFSKDDGTLQVMAAD-FLPDGKRLYILVADDDCNIHVLQ 1237
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIA--VSIRKGSFIYKLPADDALGDCLASFESSQTT 358
D + +S L +H G A +++ + I DA D + +SS
Sbjct: 1238 Y-DPEDPGSSKGDRLLHRSTFHTGHFASTMTLLPRTIIPSAQGPDANPDMM-ELDSSGPL 1295
Query: 359 --IIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRE-NPVGV 415
++ ++ GSI + P+S Y L A+Q++L I+ L P G + FR+ E + +G
Sbjct: 1296 YHVLVTSETGSIALITPLSETAYRRLSALQSQL-INTLEHP-CGLNPRAFRAIESDGIGG 1353
Query: 416 PKILDGDMLSQFLELTSTQQEAVLSFTLGS 445
++DGD+L ++L+L TQ++A ++ +G+
Sbjct: 1354 RGMVDGDLLHRWLDL-GTQRKAEIAHRVGA 1382
>gi|193644722|ref|XP_001942922.1| PREDICTED: DNA damage-binding protein 1-like [Acyrthosiphon pisum]
Length = 1156
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/240 (19%), Positives = 102/240 (42%), Gaps = 23/240 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I GD + Y E+I D + + ++D D + ++ ++ ++
Sbjct: 932 IVCGDLMRSLTLLQYKTMEGSFEEIARDYNPKWSTAIEIIDDDVFLGAENDKNLFIIHKD 991
Query: 303 DRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIAS 362
L + + L +H G++ R GS + + D ++ S Q I+
Sbjct: 992 STLTSDEARH-QLQEIGQFHCGDLINVFRHGSLVMQHFTD--------TYVSVQGGILYG 1042
Query: 363 TLLGSIVIFIPISSEEYELLEAVQARLA-----IHPLTAPLLGNDHSEFRSRENPVGVPK 417
T G++ + ++ + ++ L ++ LA + + + H+E R+ +
Sbjct: 1043 TCSGALGLVTQLTPKMFDFLSDLEKSLATVVKGVGKINHQFWRSYHTEIRTEPSE----S 1098
Query: 418 ILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLE---RVH 474
+DGD++ FL+L+ + AV+ G++D K+P + I ++ V++L+E R+H
Sbjct: 1099 FVDGDLIESFLDLSKREMIAVVDALQGAYD--HEFKKIPKDTKISLDDVIKLVEDLTRIH 1156
>gi|261201748|ref|XP_002628088.1| protein CFT1 [Ajellomyces dermatitidis SLH14081]
gi|239590185|gb|EEQ72766.1| protein CFT1 [Ajellomyces dermatitidis SLH14081]
Length = 1403
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 15/210 (7%)
Query: 245 VGDCRDGILFYSYHEDARKLEQIYCDPS--QRLVADCVLMDVDT--AVVSDRKGSIAVLS 300
+GD GI F Y E+ KL D Q + AD L D +V+D +I VL
Sbjct: 1180 MGDALKGIWFAGYSEEPYKLSLFSKDDGTLQVMAAD-FLPDGKRLYILVADDDCNIHVLQ 1238
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIA--VSIRKGSFIYKLPADDALGDCLASFESSQTT 358
D + +S L +H G A +++ + I DA D + +SS
Sbjct: 1239 Y-DPEDPGSSKGDRLLHRSTFHTGHFASTMTLLPRTIIPSAQGPDANPDMM-ELDSSGPL 1296
Query: 359 --IIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRE-NPVGV 415
++ ++ GSI + P+S Y L A+Q++L I+ L P G + FR+ E + +G
Sbjct: 1297 YHVLVTSETGSIALITPLSETAYRRLSALQSQL-INTLEHP-CGLNPRAFRAIESDGIGG 1354
Query: 416 PKILDGDMLSQFLELTSTQQEAVLSFTLGS 445
++DGD+L ++L+L TQ++A ++ +G+
Sbjct: 1355 RGMVDGDLLHRWLDL-GTQRKAEIAHRVGA 1383
>gi|393236715|gb|EJD44262.1| hypothetical protein AURDEDRAFT_137476 [Auricularia delicata
TFB-10046 SS5]
Length = 1244
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 80/206 (38%), Gaps = 44/206 (21%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I L+ RI GD + I F Y +L D QR V++D +T V D+
Sbjct: 964 ITSLSTQGARIIAGDAQQSIFFCVYKATENRLLVFADDSQQRWTTSQVMLDYNTVVAGDK 1023
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPN---------------------CAYHMGEIAVSIR 331
G++ V +RL D+ S + P C +H+G+I +S++
Sbjct: 1024 FGNVFV----NRLSDHVSNLVDDDPTGTGLLHEKGMFMGAPHKTSMLCHFHVGDIIMSLQ 1079
Query: 332 KGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLA 390
+ S + + I+ L G+I + +P +S E+ + ++ +
Sbjct: 1080 RTSLV----------------PGGREVIVYFGLHGTIGMLVPFASKEDVDFFTPLEQHMR 1123
Query: 391 IHPLTAPLLGNDHSEFRSRENPVGVP 416
L+ L+ D +R PV +P
Sbjct: 1124 SENLS--LVSRDILAWRGYYVPVKIP 1147
>gi|121700262|ref|XP_001268396.1| nuclear mRNA splicing factor, putative [Aspergillus clavatus NRRL 1]
gi|119396538|gb|EAW06970.1| nuclear mRNA splicing factor, putative [Aspergillus clavatus NRRL 1]
Length = 1209
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 86/203 (42%), Gaps = 12/203 (5%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R + ++D +T D+
Sbjct: 982 IVGLQTQGSRIIVSDVRESVTYVVYKYQENVLIPFVDDTVSRWMTSTTMVDYETVAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAY-HMGEIAVSIRKGSFIYKLPADDALGDC 348
G++ ++ C ++ + A + +L Y H + + ++ +P
Sbjct: 1042 FGNLWLVRCPKKISEEADEDGSGAHLIHERGYLHGTPNRLELMIHTYTQDIPTSVHKTQL 1101
Query: 349 LASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFR 407
+A + ++ + G+I + +P +S E+ + + ++ +LA PL G DH +R
Sbjct: 1102 VAG---GRDILVWTGFQGTIGMLVPFMSREDVDFFQNLEMQLASQ--CPPLAGRDHLIYR 1156
Query: 408 SRENPVGVPKILDGDMLSQFLEL 430
S P V ++DGD+ + L
Sbjct: 1157 SYYAP--VKGVIDGDLCEMYFLL 1177
>gi|452824087|gb|EME31092.1| DNA damage-binding protein 1 isoform 1 [Galdieria sulphuraria]
Length = 1128
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 90/201 (44%), Gaps = 19/201 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I +GD + +Y +E + D + ++D+D + ++ ++ L
Sbjct: 920 ILIGDLVRSVSLLAYKPMNGTIEDVARDIDPSWITVIEMLDLDYYISAENCFNLFTLK-- 977
Query: 303 DRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTII 360
R D ++ E L YH+GE+ IR G + ++P S S +++
Sbjct: 978 -RNSDASTEEERSRLEKVGEYHLGELVNRIRHGRLVLQIPE---------SGISILKSLL 1027
Query: 361 ASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFR--SRENPVGVPK- 417
T G++ + I + ++ L ++Q A++ + + G H ++R + E +G K
Sbjct: 1028 YGTANGALGVIASIDEKTFQFLHSLQT--ALNEVIKGVGGIQHEDWRRFTSERRIGDSKN 1085
Query: 418 ILDGDMLSQFLELTSTQQEAV 438
LDGD++ +FL+L+ + E V
Sbjct: 1086 FLDGDLIERFLDLSRDKMELV 1106
>gi|58383228|ref|XP_312466.2| AGAP002472-PA [Anopheles gambiae str. PEST]
gi|55242305|gb|EAA08181.2| AGAP002472-PA [Anopheles gambiae str. PEST]
Length = 1138
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 33/242 (13%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + E+I D + ++D D + +D ++ V C
Sbjct: 920 ILVGDLMRSITLLQYKQMEGSFEEIARDYQPNWMTAVEILDDDAFLGADNSNNLFV--C- 976
Query: 303 DRLEDNAS---PECNLTPNCA-YHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTT 358
L+D+A+ E P A +H+G++ R GS + + ++ S+ TT
Sbjct: 977 --LKDSAATTDEERQQMPEVAQFHLGDMVNVFRHGSLVMQNISE----------RSTPTT 1024
Query: 359 --IIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGN-DHSEFRSRENPVGV 415
++ T+ G+I + I S+ YE L +Q L T +G DHS +RS +
Sbjct: 1025 GCVLFGTVSGAIGLVTQIQSDFYEFLRKLQENLT---NTIKSVGKIDHSYWRSFHTETKM 1081
Query: 416 PK---ILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLER 472
+ +DGD++ FL+L+ +E + +LG ++ + + I ++V+ L R
Sbjct: 1082 ERCEGFIDGDLVESFLDLS---REKMREASLGLEIDVEGTKREATVDDII--KIVEDLTR 1136
Query: 473 VH 474
+H
Sbjct: 1137 IH 1138
>gi|410930842|ref|XP_003978807.1| PREDICTED: splicing factor 3B subunit 3-like [Takifugu rubripes]
Length = 399
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 134/332 (40%), Gaps = 64/332 (19%)
Query: 118 SDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDASCDGIKLEETETWQL 177
SD + T +KA Q E G +L++ + ++ + I +
Sbjct: 97 SDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLNENLPEAI-------FGA 149
Query: 178 RLAYSTTWPGMVLAICPY----LDRYFLASAGNAF--YVCGFPNDNPQRVRRFAVGRTRF 231
A + W +V I P LD+ L AF VC FP VG R
Sbjct: 150 PKAGAGQWASLVRLINPIQGVTLDQVQLEQNEAAFSVAVCRFPKTGDDWY--VLVGVARD 207
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYH--EDARKLEQIYCDPSQRLVADCVLMDVDTAVV 289
MI+ +VG G Y+Y KLE ++ RL + DVD
Sbjct: 208 MIL------NPKSVG----GGFIYTYRLVSGGEKLEFVH---KVRLPPNTS-DDVD---- 249
Query: 290 SDRKGSIAVLSCSDR-LEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
D G+ A+ DR L + AS + + N YH+GE +S++K + I
Sbjct: 250 EDPTGNKALW---DRGLLNGASQKAEVAMN--YHVGETVLSLQKTTLI------------ 292
Query: 349 LASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHPLTAPLLGNDHSEF 406
+++ +TL G I I +P +S E+++ + ++ + A P PL G DH F
Sbjct: 293 ----PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHLEMHMRAEFP---PLCGRDHLSF 345
Query: 407 RSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
RS P V ++DGD+ QF + +Q+++
Sbjct: 346 RSYYFP--VKNVIDGDLCEQFNSMDPHRQKSL 375
>gi|238880502|gb|EEQ44140.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 1168
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 130/339 (38%), Gaps = 67/339 (19%)
Query: 103 TKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDA 162
+K ++ ++ N SM+ S +S+ +VG T Q + L +S D +
Sbjct: 867 SKSNQVIQSLQLDGNESIVSMSAVSFNKTSTPSVPASHLVVGVCTNQ---TILPNSYDKS 923
Query: 163 SCDGIKLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVR 222
K+ + L+L + T + + + D+ +AS GN +R
Sbjct: 924 YLYTFKIGKK---HLQLVHKTELDHIPQVLENFQDKLLVAS-GN-------------HIR 966
Query: 223 RFAVGRTRFM------------IMLLTAHFTRIAVGDC-RDGILFYSYHEDARKLEQIYC 269
+ +G+ + + I + RI + D + I+F + E +
Sbjct: 967 LYDIGQKQLLKKSTTIIDFSTNINKIIPQTNRIIICDSHKSSIVFAKFDESQNQFVPFAD 1026
Query: 270 DPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTP-------NCAY- 321
D +R + + +D+DT + D+ G+I V + + A + + +C Y
Sbjct: 1027 DVMKRQITSIMNLDIDTLIGGDKFGNIFVTRIDEDISKQADDDWTILKTQDGILNSCPYK 1086
Query: 322 -------HMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIP- 373
H+G+I S G LA ES +I + L G+I + IP
Sbjct: 1087 LQNLIEFHIGDIITSFNLGCL------------NLAGTES----VIYTGLQGTIGLLIPL 1130
Query: 374 ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
+S E ELL +Q L + L+G DH + RS NP
Sbjct: 1131 VSKSEVELLFNLQ--LYMQQSQNNLVGKDHLKLRSYYNP 1167
>gi|119473054|ref|XP_001258481.1| nuclear mRNA splicing factor, putative [Neosartorya fischeri NRRL
181]
gi|119406633|gb|EAW16584.1| nuclear mRNA splicing factor, putative [Neosartorya fischeri NRRL
181]
Length = 1209
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 85/203 (41%), Gaps = 12/203 (5%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 982 IVGLQTQGSRIIVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETVAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAY-HMGEIAVSIRKGSFIYKLPADDALGDC 348
G++ ++ C ++ + A + +L Y H + + ++ +P
Sbjct: 1042 FGNLWLVRCPKKVSEEADEDGSGAHLIHERGYLHGTPNRLDLMIHTYTQDIPTSLHKTQL 1101
Query: 349 LASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFR 407
+A + ++ + G+I + +P +S E+ + + ++ +LA PL G DH +R
Sbjct: 1102 VAG---GRDILVWTGFQGTIGMLVPFVSREDVDFFQNLEMQLASQ--CPPLAGRDHLIYR 1156
Query: 408 SRENPVGVPKILDGDMLSQFLEL 430
S P V ++DGD+ + L
Sbjct: 1157 SYYAP--VKGVIDGDLCEMYFLL 1177
>gi|159130328|gb|EDP55441.1| nuclear mRNA splicing factor, putative [Aspergillus fumigatus A1163]
Length = 1225
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 982 IVGLQTQGSRIVVSDVRESVTYVVYKYQDNILIPFVDDSVSRWTTSTTMVDYETVAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAY-HMGEIAVSIRKGSFIYKLPADDALGDC 348
G++ ++ C + + A + +L Y H + + ++ +P
Sbjct: 1042 FGNLWLVRCPKKASEEADEDGSGAHLIHERGYLHGAPNRLDLMIHTYTQDIPTSLHKTQL 1101
Query: 349 LASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFR 407
+A + ++ + G+I + +P +S E+ + + ++ +LA PL G DH +R
Sbjct: 1102 VAG---GRDILVWTGFQGTIGMLVPFVSREDVDFFQNLEMQLASQ--CPPLAGRDHLIYR 1156
Query: 408 SRENPVGVPKILDGDMLSQFLEL 430
S P V ++DGD+ + L
Sbjct: 1157 SYYAP--VKGVIDGDLCEMYFLL 1177
>gi|70992737|ref|XP_751217.1| nuclear mRNA splicing factor [Aspergillus fumigatus Af293]
gi|74670386|sp|Q4WLI5.1|RSE1_ASPFU RecName: Full=Pre-mRNA-splicing factor rse1
gi|66848850|gb|EAL89179.1| nuclear mRNA splicing factor, putative [Aspergillus fumigatus Af293]
Length = 1225
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDR 292
I+ L +RI V D R+ + + Y L D R ++D +T D+
Sbjct: 982 IVGLQTQGSRIVVSDVRESVTYVVYKYQDNILIPFVDDSVSRWTTSTTMVDYETVAGGDK 1041
Query: 293 KGSIAVLSCSDRLEDNASPE---CNLTPNCAY-HMGEIAVSIRKGSFIYKLPADDALGDC 348
G++ ++ C + + A + +L Y H + + ++ +P
Sbjct: 1042 FGNLWLVRCPKKASEEADEDGSGAHLIHERGYLHGAPNRLDLMIHTYTQDIPTSLHKTQL 1101
Query: 349 LASFESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFR 407
+A + ++ + G+I + +P +S E+ + + ++ +LA PL G DH +R
Sbjct: 1102 VAG---GRDILVWTGFQGTIGMLVPFVSREDVDFFQNLEMQLASQ--CPPLAGRDHLIYR 1156
Query: 408 SRENPVGVPKILDGDMLSQFLEL 430
S P V ++DGD+ + L
Sbjct: 1157 SYYAP--VKGVIDGDLCEMYFLL 1177
>gi|198432471|ref|XP_002129229.1| PREDICTED: similar to DNA damage-binding protein 1 (Damage-specific
DNA-binding protein 1) (UV-damaged DNA-binding factor)
(DDB p127 subunit) (DNA damage-binding protein a) (DDBa)
(UV-damaged DNA-binding protein 1) (UV-DDB 1) (Xeroderma
pigmentosum group E-co... isoform 2 [Ciona intestinalis]
Length = 1142
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 107/267 (40%), Gaps = 19/267 (7%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
+L L G V +C + + + LA+ + + + + + +R ++ + +
Sbjct: 860 KLTLVAEKEVKGAVFCLCQF-NGHVLAAINTSVSIYQWTTE--KELRAECSNQSNILALY 916
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGS 295
L + VGD + +Y L++I D S + ++D D + ++ +
Sbjct: 917 LKCKGDFVLVGDLMRSMSILNYKHVEGNLDEIAKDYSPNWMTAVEILDDDNFLGAENFYN 976
Query: 296 IAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESS 355
+ + D L +H+G+ + R GS + + + A+ SS
Sbjct: 977 VFICQ-KDSGATTDEERSKLREAALFHVGDSINTFRHGSLVMQNVGETAV--------SS 1027
Query: 356 QTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGN-DHSEFRS---REN 411
+ I+ T+ GSI + + + Y L ++Q RLA +GN DH +RS E
Sbjct: 1028 KGHILFGTVHGSIGVITTVDEDLYAFLHSIQNRLA---KVIKSVGNIDHESWRSFCTNEK 1084
Query: 412 PVGVPKILDGDMLSQFLELTSTQQEAV 438
+DGD++ FL+L + V
Sbjct: 1085 TEAHRGFVDGDLIECFLDLNREKMAEV 1111
>gi|198432469|ref|XP_002129207.1| PREDICTED: similar to DNA damage-binding protein 1 (Damage-specific
DNA-binding protein 1) (UV-damaged DNA-binding factor)
(DDB p127 subunit) (DNA damage-binding protein a) (DDBa)
(UV-damaged DNA-binding protein 1) (UV-DDB 1) (Xeroderma
pigmentosum group E-co... isoform 1 [Ciona intestinalis]
Length = 1150
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 107/267 (40%), Gaps = 19/267 (7%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIML 235
+L L G V +C + + + LA+ + + + + + +R ++ + +
Sbjct: 864 KLTLVAEKEVKGAVFCLCQF-NGHVLAAINTSVSIYQWTTE--KELRAECSNQSNILALY 920
Query: 236 LTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGS 295
L + VGD + +Y L++I D S + ++D D + ++ +
Sbjct: 921 LKCKGDFVLVGDLMRSMSILNYKHVEGNLDEIAKDYSPNWMTAVEILDDDNFLGAENFYN 980
Query: 296 IAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESS 355
+ + D L +H+G+ + R GS + + + A+ SS
Sbjct: 981 VFICQ-KDSGATTDEERSKLREAALFHVGDSINTFRHGSLVMQNVGETAV--------SS 1031
Query: 356 QTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGN-DHSEFRS---REN 411
+ I+ T+ GSI + + + Y L ++Q RLA +GN DH +RS E
Sbjct: 1032 KGHILFGTVHGSIGVITTVDEDLYAFLHSIQNRLA---KVIKSVGNIDHESWRSFCTNEK 1088
Query: 412 PVGVPKILDGDMLSQFLELTSTQQEAV 438
+DGD++ FL+L + V
Sbjct: 1089 TEAHRGFVDGDLIECFLDLNREKMAEV 1115
>gi|308805058|ref|XP_003079841.1| spliceosomal-like protein (ISS) [Ostreococcus tauri]
gi|116058298|emb|CAL53487.1| spliceosomal-like protein (ISS) [Ostreococcus tauri]
Length = 1166
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 20/206 (9%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
RI VGD ++ I F Y D + D + + +D DT +D+ G+I V
Sbjct: 949 RIYVGDVQESIHFVKYKADEGSMYIFADDTKPAYMTAALPLDFDTLAGADKFGNIFV--- 1005
Query: 302 SDRLEDNASPECNLTPNCA---YHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQ-- 356
+RL + S + + P Y G + + K + A +G+ + +
Sbjct: 1006 -NRLPKDISEDMDEDPTGGKNIYSQGVLNGAPNKS----ETCARTFIGETVCALTKGALQ 1060
Query: 357 ----TTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
I+ T LG I +P + E+ + + + + ++G DH FRS P
Sbjct: 1061 PGGIDIIMYGTFLGGIGALVPFQTRS-EIDFFITLEMHMRQEASSIVGRDHMAFRSYYAP 1119
Query: 413 VGVPKILDGDMLSQFLELTSTQQEAV 438
V ++DGD+ QF L Q +
Sbjct: 1120 --VKNVIDGDLCEQFGALAPEVQRRI 1143
>gi|356467155|gb|AET09709.1| splicing factor 3B subunit 3 [Trichinella pseudospiralis]
Length = 129
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 345 LGDCLASFES------SQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAP 397
+G+C+ + S +++ ST+ G I +P SS E+YE + ++ L P
Sbjct: 9 VGECVTCLQKAMLIPGSSESLVYSTMSGMIGALVPFSSKEDYEFFQHLEMHLRTE--YPP 66
Query: 398 LLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
L G DH +RS P V ++DGD+ Q+ L +Q+ +
Sbjct: 67 LCGRDHLAYRSFYAP--VKGVIDGDLCEQYCLLEYAKQKEI 105
>gi|124359136|gb|ABD32504.2| CPSF A subunit, C-terminal; WD40-like [Medicago truncatula]
Length = 632
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 107/265 (40%), Gaps = 33/265 (12%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNA--FYVCGFPNDNPQRVRRFAVGRTRFMIM 234
L L + T G+ LA+ + R LA G FY G + +R++ I+
Sbjct: 377 LELLHKTQVEGVPLALSQFQGR-LLAGIGPVLRFYDLG----KRRLLRKYENKLFPNTIV 431
Query: 235 LLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKG 294
+ + RI VGD ++ + Y D +L D R + +D DT G
Sbjct: 432 SIQTYRDRIYVGDTQESFHYCKYRWDENQLYIFADDCVPRWLTASYHIDFDTMAEDPTGG 491
Query: 295 SIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFES 354
I ++ + N +P + +H+G++ ++K S I P G+C
Sbjct: 492 RIK----WEQGKLNGAPN-KVEEIVQFHVGDVISCLQKASLI---PGG---GEC------ 534
Query: 355 SQTTIIASTLLGSI-VIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPV 413
I+ T++GSI + S ++ + ++ + + PL G DH +RS P
Sbjct: 535 ----ILNGTVMGSIGALHAFTSRDDVDFFSHLE--MHMRQDNPPLCGRDHMAYRSAYFP- 587
Query: 414 GVPKILDGDMLSQFLELTSTQQEAV 438
V ++DGD+ QF L Q +
Sbjct: 588 -VKDVIDGDLCEQFPTLPMDLQRKI 611
>gi|320037168|gb|EFW19106.1| pre-mRNA-splicing factor rse1 [Coccidioides posadasii str.
Silveira]
Length = 970
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 89/214 (41%), Gaps = 22/214 (10%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI V D ++ + + Y +L D R ++D +T D
Sbjct: 742 LIVGLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAGGD 801
Query: 292 RKGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
+ G++ +L C + + A + +L Y G R ++ P D
Sbjct: 802 KFGNLWLLRCPQKASEEADEDGSGAHLIHERQYLQG---APNRLSLMVHFYPQD-----I 853
Query: 349 LASFESSQTT------IIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGN 401
S + +Q ++ + L G++ + +P +S E+ + ++++ +L T PL G
Sbjct: 854 PTSIQKTQLVAGGRDILVWTGLQGTVGMLVPFVSREDVDFFQSLEMQLTSQ--TPPLAGR 911
Query: 402 DHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQ 435
DH +RS P +DGD+ + L + ++
Sbjct: 912 DHLIYRSYYAP--AKGTIDGDLCETYFTLPNDKK 943
>gi|119173562|ref|XP_001239205.1| hypothetical protein CIMG_10227 [Coccidioides immitis RS]
Length = 1208
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 89/214 (41%), Gaps = 22/214 (10%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI V D ++ + + Y +L D R ++D +T D
Sbjct: 981 LIVGLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAGGD 1040
Query: 292 RKGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
+ G++ +L C + + A + +L Y G R ++ P D
Sbjct: 1041 KFGNLWLLRCPQKASEEADEDGSGAHLIHERQYLQG---APNRLSLMVHFYPQD-----I 1092
Query: 349 LASFESSQTT------IIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGN 401
S + +Q ++ + L G++ + +P +S E+ + ++++ +L T PL G
Sbjct: 1093 PTSIQKTQLVAGGRDILVWTGLQGTVGMLVPFVSREDVDFFQSLEMQLTSQ--TPPLAGR 1150
Query: 402 DHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQ 435
DH +RS P +DGD+ + L + ++
Sbjct: 1151 DHLIYRSYYAP--AKGTIDGDLCETYFTLPNDKK 1182
>gi|392869416|gb|EJB11761.1| pre-mRNA-splicing factor rse1 [Coccidioides immitis RS]
Length = 1209
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 89/214 (41%), Gaps = 22/214 (10%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI V D ++ + + Y +L D R ++D +T D
Sbjct: 981 LIVGLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAGGD 1040
Query: 292 RKGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
+ G++ +L C + + A + +L Y G R ++ P D
Sbjct: 1041 KFGNLWLLRCPQKASEEADEDGSGAHLIHERQYLQG---APNRLSLMVHFYPQD-----I 1092
Query: 349 LASFESSQTT------IIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGN 401
S + +Q ++ + L G++ + +P +S E+ + ++++ +L T PL G
Sbjct: 1093 PTSIQKTQLVAGGRDILVWTGLQGTVGMLVPFVSREDVDFFQSLEMQLTSQ--TPPLAGR 1150
Query: 402 DHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQ 435
DH +RS P +DGD+ + L + ++
Sbjct: 1151 DHLIYRSYYAP--AKGTIDGDLCETYFTLPNDKK 1182
>gi|303324325|ref|XP_003072150.1| Splicing factor 3B subunit 3, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240111860|gb|EER30005.1| Splicing factor 3B subunit 3, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 1209
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 89/214 (41%), Gaps = 22/214 (10%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
+I+ L +RI V D ++ + + Y +L D R ++D +T D
Sbjct: 981 LIVGLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAGGD 1040
Query: 292 RKGSIAVLSCSDRLEDNASPE---CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
+ G++ +L C + + A + +L Y G R ++ P D
Sbjct: 1041 KFGNLWLLRCPQKASEEADEDGSGAHLIHERQYLQG---APNRLSLMVHFYPQD-----I 1092
Query: 349 LASFESSQTT------IIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGN 401
S + +Q ++ + L G++ + +P +S E+ + ++++ +L T PL G
Sbjct: 1093 PTSIQKTQLVAGGRDILVWTGLQGTVGMLVPFVSREDVDFFQSLEMQLTSQ--TPPLAGR 1150
Query: 402 DHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQ 435
DH +RS P +DGD+ + L + ++
Sbjct: 1151 DHLIYRSYYAP--AKGTIDGDLCETYFTLPNDKK 1182
>gi|384249029|gb|EIE22512.1| hypothetical protein COCSUDRAFT_83469 [Coccomyxa subellipsoidea
C-169]
Length = 822
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 95/234 (40%), Gaps = 42/234 (17%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCV----------LMDVDTAVVSDR 292
IA + YSY D+ E + DP R A C+ L +AV D
Sbjct: 570 IAAAGKTQSVTLYSYSPDS-GFEVLCADPCSRRAASCLITSECRGDEALETPQSAVCLDA 628
Query: 293 KGSIAVLSCSDRLE-DNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLAS 351
G + L R E D + N+ + +H + V I +GS C+
Sbjct: 629 DGGLYGL----RFERDERGLQRNMQMDMHFHCRGLGVCIVEGSLT-----------CIGK 673
Query: 352 FESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSR-E 410
E+ T I T G++V +S+ +Y +L AV+A LA L PL G HS FRS E
Sbjct: 674 -EARGTAPIVCTAEGALVQLSALSAGDYAVLAAVEAALARSSLAGPLSGASHSAFRSAVE 732
Query: 411 NPVGVPKIL------------DGDMLSQFLELTSTQQEAVL-SFTLGSFDTIKA 451
G K L DGD+L+Q ++L + + +L S T G I A
Sbjct: 733 ASAGGNKTLAHGLAGGSLRAIDGDILAQLVQLPDREVQLILGSVTEGDLPKIHA 786
>gi|296806499|ref|XP_002844059.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238845361|gb|EEQ35023.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 1348
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 105/210 (50%), Gaps = 14/210 (6%)
Query: 245 VGDCRDGILFYSYHEDARKLEQIYCDPSQRL--VADCVLMDVDT--AVVSDRKGSIAVLS 300
VGD G+ F Y E+ KL+ ++ ++ + +A L D + +V+D ++ VL
Sbjct: 1125 VGDAIKGLWFTGYSEEPYKLD-LFGKENENIAVIAADFLPDGNRLYVLVADDDCNLHVLQ 1183
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSIR---KGSFIYKLPADDALGDCLASFESSQT 357
D + ++S L +H+G A ++ +GS PAD D A S+
Sbjct: 1184 Y-DPEDPSSSKGDRLLHRNVFHVGHFASTMTLLPQGSHTPHSPADRDAMDTDAPLPPSKY 1242
Query: 358 TIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP--VGV 415
I+ + GS+ I P++ + Y L A+Q++L ++ L P G + +R+ E+ G
Sbjct: 1243 QILMTFQTGSVGIITPLNEDSYRRLLALQSQL-VNALEHP-CGLNPRGYRAVESDGIGGQ 1300
Query: 416 PKILDGDMLSQFLELTSTQQEAVLSFTLGS 445
++DG++L ++L++ Q++A ++ +G+
Sbjct: 1301 RGMIDGNLLLRWLDM-GAQRKAEIAGRVGA 1329
>gi|355718834|gb|AES06402.1| splicing factor 3b, subunit 3, 130kDa [Mustela putorius furo]
Length = 1101
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 43/175 (24%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 946 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 1001
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 1002 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 1057
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARL-AIHP 393
+++ +TL G I I +P +S E+++ + V+ L + HP
Sbjct: 1058 ------------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP 1100
>gi|320163506|gb|EFW40405.1| UV-damaged DNA binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 1123
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 11/149 (7%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y +E+I D V ++D D + + S + +C
Sbjct: 972 IIVGDLMRSISLLMYKSGTSSIEEIAQDTCPNWVTAVDMLDDDVFIGGE--SSFNIFTCR 1029
Query: 303 DRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
LE + E L +H+GE R GS + KLP + + Q + +
Sbjct: 1030 RNLEASTDEERKRLEVVGEFHVGEFINQFRAGSLVMKLPDEQE--------QPIQPSTLF 1081
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLA 390
T G I + ++ +YE L+ VQA +A
Sbjct: 1082 GTGNGVIGVIARLTRSQYEFLQLVQAAMA 1110
>gi|427788481|gb|JAA59692.1| Putative dna damage-binding protein 1 [Rhipicephalus pulchellus]
Length = 1156
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 104/251 (41%), Gaps = 26/251 (10%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
+ + L A + VGD + +Y E+I D ++ ++D DT + +
Sbjct: 925 ILALYLRAKGDFVLVGDLMRSMSLLAYKPLEGNFEEIARDYQTNWMSSVEILDDDTFLGA 984
Query: 291 DRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLA 350
+ ++ V D +L +H+GE R GS + + P + +
Sbjct: 985 ESTTNLFVCQ-KDSAATTDEERQHLQEVGQFHLGEFVNVFRHGSLVMQHPGETS------ 1037
Query: 351 SFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRS-- 408
+Q +++ T+ G+I + + ++ Y L VQ +L + + DH+ +RS
Sbjct: 1038 --SPTQGSVLFGTIHGAIGLVSQLPADFYTFLSEVQEKLT--KVIKSVGKIDHAFWRSFS 1093
Query: 409 ----RENPVGVPKILDGDMLSQFLELTSTQ-QEAVLSFTLGSFDTIKASSKLPPSSPIPV 463
E VG +DGD++ FL+L+ + QE V + +K + + +
Sbjct: 1094 TERKTEPAVG---FIDGDLIESFLDLSRDKMQEVVQGIQMDDGSGMKRDASVD-----DL 1145
Query: 464 NQVVQLLERVH 474
++++ L R+H
Sbjct: 1146 IKIIEELSRIH 1156
>gi|427780151|gb|JAA55527.1| Putative dna damage-binding protein 1 [Rhipicephalus pulchellus]
Length = 1181
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 104/251 (41%), Gaps = 26/251 (10%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
+ + L A + VGD + +Y E+I D ++ ++D DT + +
Sbjct: 950 ILALYLRAKGDFVLVGDLMRSMSLLAYKPLEGNFEEIARDYQTNWMSSVEILDDDTFLGA 1009
Query: 291 DRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLA 350
+ ++ V D +L +H+GE R GS + + P + +
Sbjct: 1010 ESTTNLFVCQ-KDSAATTDEERQHLQEVGQFHLGEFVNVFRHGSLVMQHPGETS------ 1062
Query: 351 SFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRS-- 408
+Q +++ T+ G+I + + ++ Y L VQ +L + + DH+ +RS
Sbjct: 1063 --SPTQGSVLFGTIHGAIGLVSQLPADFYTFLSEVQEKLT--KVIKSVGKIDHAFWRSFS 1118
Query: 409 ----RENPVGVPKILDGDMLSQFLELTSTQ-QEAVLSFTLGSFDTIKASSKLPPSSPIPV 463
E VG +DGD++ FL+L+ + QE V + +K + + +
Sbjct: 1119 TERKTEPAVG---FIDGDLIESFLDLSRDKMQEVVQGIQMDDGSGMKRDASVD-----DL 1170
Query: 464 NQVVQLLERVH 474
++++ L R+H
Sbjct: 1171 IKIIEELSRIH 1181
>gi|225679191|gb|EEH17475.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 1377
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 16/210 (7%)
Query: 245 VGDCRDGILFYSYHEDARKLEQIYCDPS--QRLVADCVLMDVDTAV-VSDRKGSIAVLSC 301
+GD G+ F Y E+ KL D Q + AD + + V+D +I VL
Sbjct: 1153 MGDALKGLWFAGYSEEPYKLSLFSKDDGSLQVMAADFLPHGKRLFIMVADDDCNIHVLQY 1212
Query: 302 SDRLEDNASPECN-LTPNCAYHMGEIAVSIR---KGSFIYKLPADDALG-DCLASFESSQ 356
ED S + + L +H G+ A ++ + S + + P +A D +S Q
Sbjct: 1213 DP--EDPGSAKGDRLLHRSTFHTGQFASTLTLLPRTSVLSQGPEAEANAMDLDSSGPLHQ 1270
Query: 357 TTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRE-NPVGV 415
+ + T GSI + P+S Y L A+Q+++ I+ L P G + FR+ E + +G
Sbjct: 1271 VLVTSET--GSIALITPVSEMAYRRLSALQSQM-INTLEHP-CGLNPRAFRAVESDGIGG 1326
Query: 416 PKILDGDMLSQFLELTSTQQEAVLSFTLGS 445
++DGD++ ++L+L TQ++A ++ +G+
Sbjct: 1327 RGMVDGDLVQKWLDL-GTQRKAEIASRVGA 1355
>gi|147787360|emb|CAN64633.1| hypothetical protein VITISV_043788 [Vitis vinifera]
Length = 1143
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 97/265 (36%), Gaps = 63/265 (23%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFM---- 232
L L + T G+ LA+C + R LA G+ +R + +G+ R +
Sbjct: 894 LELLHKTQVEGVPLALCQFQGR-LLAGIGSV-------------LRLYDLGKRRLLRKCE 939
Query: 233 -------IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVD 285
I+ + + RI VGD ++ + Y D +L D R + +D D
Sbjct: 940 NKLFPNTIVSIHTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYHIDFD 999
Query: 286 TAVVSDRKGSIAVLSCSDRLEDNASPECNLTP---NCAYHMGEIAVSIRKGSFIYKLPAD 342
T +D+ G+I + RL + S E P + G++ + K I +
Sbjct: 1000 TMAGADKFGNIYFV----RLPQDVSDEVEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVG 1055
Query: 343 DALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGND 402
D + CL AS + G R+ + PL G D
Sbjct: 1056 DVV-TCLQK---------ASLIPGG-------------------WRMHMRQEHPPLCGRD 1086
Query: 403 HSEFRSRENPVGVPKILDGDMLSQF 427
H +RS P V ++DGD+ QF
Sbjct: 1087 HMAYRSAYFP--VKDVIDGDLCEQF 1109
>gi|295665178|ref|XP_002793140.1| cleavage and polyadenylation specificity factor subunit A
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226278054|gb|EEH33620.1| cleavage and polyadenylation specificity factor subunit A
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 1408
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 16/210 (7%)
Query: 245 VGDCRDGILFYSYHEDARKLEQIYCDP-SQRLVADCVLMDVDT--AVVSDRKGSIAVLSC 301
+GD G+ F Y E+ KL D S +++A L D +V+D +I VL
Sbjct: 1186 MGDALKGLWFAGYSEEPYKLSLFSKDDGSLQVMAADFLPDGKRLYIMVADDDCNIHVLQY 1245
Query: 302 SDRLEDNASPECN-LTPNCAYHMGEIAVSIR---KGSFIYKLPADDALG-DCLASFESSQ 356
ED S + + L +H G+ A ++ + S + + P +A D S Q
Sbjct: 1246 DP--EDPGSAKGDRLLHRSTFHTGQFASTLTLLPRTSVLSQGPETEANAMDLDLSGPLHQ 1303
Query: 357 TTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRE-NPVGV 415
+ + T GSI + P+S Y L A+Q+++ I+ L P G + FR+ E + +G
Sbjct: 1304 VLVTSET--GSIALITPVSEMAYRRLSALQSQM-INTLEHP-CGLNPRAFRAVESDGIGG 1359
Query: 416 PKILDGDMLSQFLELTSTQQEAVLSFTLGS 445
++DGD++ ++L+L TQ++A ++ +G+
Sbjct: 1360 RGMVDGDLVQKWLDL-GTQRKAEIASRVGA 1388
>gi|219110831|ref|XP_002177167.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411702|gb|EEC51630.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1303
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 83/216 (38%), Gaps = 42/216 (19%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R +GD I Y A +L I D S R + L+D +T V D+ G+I+V+
Sbjct: 1088 RAYIGDMMQSIQIVRYDVSANRLVLIANDASPRPIVCQELLDWNTVAVGDKFGNISVMRL 1147
Query: 302 SDRLEDNA-----------SPECNLTPN----CAYHMGEIAVSIRKGSFIYKLPADDALG 346
+ +A S ++ P C Y++GE+ S+ + S +
Sbjct: 1148 PRGADTSAIDVTGQRALWDSSREDMIPKLELLCQYYVGEVVTSMTRSSLV---------- 1197
Query: 347 DCLASFESSQTTIIASTLLGSIVIFIPISSEE----YELLEAVQARLAIHPLTAPLLGND 402
++I T+ G I F+P ++ Y LE+ A P G D
Sbjct: 1198 ------AGGAESLIYVTVSGRIGAFVPFTNRNDVDFYSQLESELRGDASRP-----TGRD 1246
Query: 403 HSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+RS P + ++DGD+ F L +Q +
Sbjct: 1247 PQSYRSYYAP--MMHVVDGDLCDAFNSLGPEKQNKI 1280
>gi|167386195|ref|XP_001737658.1| spliceosomal protein sap [Entamoeba dispar SAW760]
gi|165899468|gb|EDR26056.1| spliceosomal protein sap, putative [Entamoeba dispar SAW760]
Length = 1079
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 86/196 (43%), Gaps = 15/196 (7%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL-- 299
+I VG G ++ +Y DA L D + ++D + + D+ GS+ +
Sbjct: 860 KIVVGTVATGFIYVNYDSDANILSITEKDRIWHSLTASTILDETSTIGFDKLGSVFITET 919
Query: 300 -SCSDRLE-DNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLA-SFESSQ 356
+ S++L N P N +++G++ S+ I+K D+ + ++
Sbjct: 920 NTTSNQLNLTNVIPLSNEI--VQWYVGDVVTSVSVNE-IWKGITDNINEYTFEEQIKENK 976
Query: 357 TTIIASTLLGSIVIFIPIS-SEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP-VG 414
II S L+G I + IP + E+ E ++ + I +PLL N +R P +G
Sbjct: 977 NVIIYSCLMGRIGVLIPFNFREDVEFFSKLE--MEIKNNYSPLLSNSFDSYRGTNYPGIG 1034
Query: 415 VPKILDGDMLSQFLEL 430
V +DGD+ F ++
Sbjct: 1035 V---IDGDLCDYFNQM 1047
>gi|326477251|gb|EGE01261.1| protein kinase subdomain-containing protein [Trichophyton equinum CBS
127.97]
Length = 1267
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 97/209 (46%), Gaps = 13/209 (6%)
Query: 245 VGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAV---VSDRKGSIAVLSC 301
+GD G+ F Y E+ KL+ + V D + + V+D ++ VL
Sbjct: 1045 IGDAFKGLWFIGYSEEPYKLDLFGKENENLAVVDADFLPDGNKLYILVADDDCNLHVLQY 1104
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIR---KGSFIYKLPADDALGDCLASFESSQTT 358
D + ++S L +H G A ++ G++ P D+ D S S+
Sbjct: 1105 -DPEDPSSSKGDRLLHRSVFHTGHFASTMTLLPHGAYTPSAPVDEDAMDT-DSLPPSKYQ 1162
Query: 359 IIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP--VGVP 416
I+ + GSI + P+S + Y L A+Q++L ++ L P N +R+ E+ G
Sbjct: 1163 ILMTFQTGSIAVITPLSEDSYRRLLALQSQL-VNALEHPCSLNPRG-YRAVESDGMGGQR 1220
Query: 417 KILDGDMLSQFLELTSTQQEAVLSFTLGS 445
++DG++L ++L++ Q++A ++ +G+
Sbjct: 1221 GMIDGNLLLRWLDM-GAQRKAEIAGRVGA 1248
>gi|350645868|emb|CCD59413.1| Splicing factor 3B subunit 3, 5' fragment [Schistosoma mansoni]
Length = 1073
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 133/350 (38%), Gaps = 61/350 (17%)
Query: 7 LNVRKFHLGGTPKKVLYHSESRLLIVMRTELNNDTCSSDICCVDPLSGSVLSSFKLELGE 66
N + L TP+K ++H +S + ++ T+ N+ T ++ +++S LG
Sbjct: 742 FNQISYPLQYTPRKFVFHPDSNITYIIETDHNSYTDDVKNTHKRQMAEKMIAS---ALGG 798
Query: 67 TGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCIEHMQNSDCGSMTFC 126
T + M L + L S + AI + +A ++ C + + S C + F
Sbjct: 799 TPEDMALAKESAAAFL----SENLPEAIFGAPKAGPGMWASLLRCFKPLDGSTCQIIRFP 854
Query: 127 SKAGSSSQRTSPFREIVGYATEQLSSSSLCSS--PDDASCDGIKLEETETW----QLRLA 180
+ + F + + EQ +L + SC G L+ W +L
Sbjct: 855 QNEAAHALT---FVKFNNHPAEQFLVVALVKDLILNPRSCSGGCLKTYRIWNNGERLEFL 911
Query: 181 YSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHF 240
+ T A+C + R L GN R+R + +G+ + + H
Sbjct: 912 HETPVDDFPAALCAFQGR-LLVGVGN-------------RLRIYDLGKKKLLKKCENKHI 957
Query: 241 -----------TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQ-RLVADCVLMDVDTAV 288
+RI V D ++ + + Y + I+ D + R + ++D T
Sbjct: 958 PTLINGIYSVGSRIIVTDVQESVHWVRYRPRSDSQLVIFADDTNPRWIIHLAVLDASTVA 1017
Query: 289 VSDRKGSIAVL----SCSDRLEDN---------------ASPECNLTPNC 319
VSD+ G++ +L + D +ED+ AS +C++ PNC
Sbjct: 1018 VSDKFGNVTILRLPPNVIDDIEDDPSGNRALWDRGFLGGASQKCDVCPNC 1067
>gi|405970039|gb|EKC34976.1| DNA damage-binding protein 1 [Crassostrea gigas]
Length = 1160
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 81/201 (40%), Gaps = 17/201 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC- 301
I VGD I Y E+I D + ++D D + ++ S + +C
Sbjct: 941 ILVGDLMRSITLLLYKPMEGTFEEIARDCNPNWTTAVEILDDDNFLGAEN--SFNLFTCQ 998
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
D NL +H+GE R GS + + + + +Q +++
Sbjct: 999 KDSASTTDEDRQNLQEVGMFHLGEFVNVFRHGSLVMQHSGETS--------TPTQGSVLY 1050
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRS---RENPVGVPKI 418
T+ G++ + + E Y L+ +Q+RLA + + +HS +RS
Sbjct: 1051 GTVNGAVGLVTQVPQEFYSFLQDIQSRLA--KVIKSVGKIEHSFWRSFHTERKTEACEGF 1108
Query: 419 LDGDMLSQFLELTSTQ-QEAV 438
+DGD++ FL+L + QE V
Sbjct: 1109 IDGDLIESFLDLNRDKMQETV 1129
>gi|326471884|gb|EGD95893.1| protein kinase subdomain-containing protein [Trichophyton tonsurans
CBS 112818]
Length = 1398
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 97/209 (46%), Gaps = 13/209 (6%)
Query: 245 VGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAV---VSDRKGSIAVLSC 301
+GD G+ F Y E+ KL+ + V D + + V+D ++ VL
Sbjct: 1176 IGDAFKGLWFIGYSEEPYKLDLFGKENENLAVVDADFLPDGNKLYILVADDDCNLHVLQY 1235
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIR---KGSFIYKLPADDALGDCLASFESSQTT 358
D + ++S L +H G A ++ G++ P D+ D S S+
Sbjct: 1236 -DPEDPSSSKGDRLLHRSVFHTGHFASTMTLLPHGAYTPSAPVDEDAMDT-DSLPPSKYQ 1293
Query: 359 IIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP--VGVP 416
I+ + GSI + P+S + Y L A+Q++L ++ L P N +R+ E+ G
Sbjct: 1294 ILMTFQTGSIAVITPLSEDSYRRLLALQSQL-VNALEHPCSLNPRG-YRAVESDGMGGQR 1351
Query: 417 KILDGDMLSQFLELTSTQQEAVLSFTLGS 445
++DG++L ++L++ Q++A ++ +G+
Sbjct: 1352 GMIDGNLLLRWLDM-GAQRKAEIAGRVGA 1379
>gi|146420838|ref|XP_001486372.1| hypothetical protein PGUG_02043 [Meyerozyma guilliermondii ATCC 6260]
Length = 1206
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 78/203 (38%), Gaps = 19/203 (9%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
RI VGD + F Y D +R + +D DT + D+ G++ V
Sbjct: 977 RIVVGDGSNSTTFLKYDSLDNIFVSFADDVMKRHITALECLDHDTVIGGDKFGNVFVNRI 1036
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRK--GSFIYKLPADDALGDCLASFESSQTTI 359
L A E +L +++ ++ F+ +P G + + S I
Sbjct: 1037 PFTLSKQADQEWSLVKYQDHYLNSAGNRLKGLCEFFLQDIPTLFFKGTLVTGGKES---I 1093
Query: 360 IASTLLGSIVIFIP-ISSEEYELLEAVQ--ARLAIHP---------LTAPLLGNDHSEFR 407
+ L GS+ F P IS E A++ R + P L LLG D +FR
Sbjct: 1094 FYTGLCGSLGFFEPLISKLEVSFFTALENSIRKVLDPNLEEHDKKRLYCQLLGKDQLKFR 1153
Query: 408 SRENPVGVPKILDGDMLSQFLEL 430
NP V ++DGD + + EL
Sbjct: 1154 GYYNP--VKNVIDGDFVEYYFEL 1174
>gi|294460600|gb|ADE75875.1| unknown [Picea sitchensis]
Length = 173
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 26/133 (19%)
Query: 312 ECNLTPN-----CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLG 366
+ N PN +H+G++ S++K S I G+CL I T++G
Sbjct: 38 KLNGAPNKVEEIIQFHIGDVVTSLQKASLI------PGGGECL----------IYGTVMG 81
Query: 367 SIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLS 425
SI +P +S E+ + ++ L PL G DH +RS P V ++DGD+
Sbjct: 82 SIGALLPFTSREDVDFFSHLEMHLRQE--QPPLCGRDHMGYRSSYFP--VKDVIDGDLCE 137
Query: 426 QFLELTSTQQEAV 438
QF L Q +
Sbjct: 138 QFPTLPPDLQRKI 150
>gi|68059720|ref|XP_671834.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56488368|emb|CAI04007.1| hypothetical protein PB301481.00.0 [Plasmodium berghei]
Length = 129
Score = 43.9 bits (102), Expect = 0.18, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 21/122 (17%)
Query: 320 AYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPI-SSEE 378
++H+GEI S++K KL S II ST++G+I FIP + EE
Sbjct: 7 SFHIGEIVTSLQK----VKLSP------------VSSECIIYSTIMGTIGAFIPYDNKEE 50
Query: 379 YELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
EL + ++ + + L G +H FRS +P V ++DGD+ QF L Q +
Sbjct: 51 LELTQHLE--IILRTEKHALCGREHIFFRSYYHP--VQHVIDGDLCEQFSSLPFEVQRKI 106
Query: 439 LS 440
S
Sbjct: 107 GS 108
>gi|449706784|gb|EMD46555.1| splicing factor 3b subunit 3, putative [Entamoeba histolytica KU27]
Length = 1079
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 84/199 (42%), Gaps = 21/199 (10%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
+I VG G ++ +Y DA L D + ++D + + D+ GS+ +
Sbjct: 860 KIVVGTVATGFIYVNYDSDANILSITEKDRIWHSLTASTILDETSTIGFDKLGSVFITET 919
Query: 302 SDRLEDNASPECNLT-------PNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLA-SFE 353
+ S + NLT +++G++ S+ I+K D+ +
Sbjct: 920 NTN-----SNQLNLTDIIPLSNEIVQWYVGDVVTSVSVNE-IWKGITDNTNEYTFEEQIK 973
Query: 354 SSQTTIIASTLLGSIVIFIPIS-SEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
++ II S L+G I + IP + E+ E ++ + I +PLL N +R P
Sbjct: 974 ENKNVIIYSCLMGRIGVLIPFNFREDVEFFSKLE--MEIKNNYSPLLSNSFDSYRGTNYP 1031
Query: 413 -VGVPKILDGDMLSQFLEL 430
+GV +DGD+ F ++
Sbjct: 1032 GIGV---IDGDLCDYFNQM 1047
>gi|290981010|ref|XP_002673224.1| CPSF A subunit [Naegleria gruberi]
gi|284086806|gb|EFC40480.1| CPSF A subunit [Naegleria gruberi]
Length = 1373
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 122/289 (42%), Gaps = 41/289 (14%)
Query: 175 WQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIM 234
++L L ST+ G + + +DRY + S GN Y F + +R+ + T+F
Sbjct: 1070 YKLNLISSTSVKGPITTL-EQVDRYIICSVGNRIYTYYFDWEE-KRMHITSFYDTQFYTA 1127
Query: 235 LLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCD--PSQRLVADCVL-MDVDTAVVSD 291
L I GD + F + E +L + D P Q + ++ ++ D+ V D
Sbjct: 1128 SLNTVRNFIMFGDIYKSVSFLRWKEKGHRLILLAKDNRPLQVVSSEFLVNNDLLGLAVID 1187
Query: 292 RKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDA--LGDC- 348
++ + S + +++ NL P C +H+G + S+ + + +LP D+ LG+
Sbjct: 1188 TSKNLQIFSYLPQHQESNDGR-NLVPVCDFHIGTLINSLIRMK-VRELPDDNTIRLGNVN 1245
Query: 349 ----------LASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARL--------A 390
+ + I+ ++ G+I PI+ + L A+Q ++
Sbjct: 1246 EKPKQSGKKDITKTNPNHQFILFGSVDGAIGYVAPINEVTHRRLFALQLKMYTQLEQAAG 1305
Query: 391 IHP----LTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQ 435
+HP L PL + +E+ ++N I+DG ++ + + + Q
Sbjct: 1306 LHPKSFRLYKPL---ERTEYNYKKN------IIDGQLIWNYANINTILQ 1345
>gi|403170487|ref|XP_003329830.2| hypothetical protein PGTG_11767 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375168746|gb|EFP85411.2| hypothetical protein PGTG_11767 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1513
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 113/272 (41%), Gaps = 30/272 (11%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVG----RTRFM 232
LRL Y V A+ ++ YFL + G Y F D R AVG +
Sbjct: 1240 LRLRYYEETKACVTAV-DAINGYFLHTMGQKLYAKCFEQDE----RLLAVGFLDIKPYTT 1294
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQI---YCDPSQRLVADCVLMDVDTAVV 289
M + +F I +GD GI ++ E+ KL ++ Y D + D +++D A+V
Sbjct: 1295 CMRIFKNF--ILLGDAVKGITLVAFQEEPYKLIELGHTYVDLKCSTI-DFLVIDGKLAIV 1351
Query: 290 -SDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
+D G I + + ++ + L + E+ S++ G +L A D
Sbjct: 1352 ATDLNGVIRIFEYNPTNIESQGGQKLLCRSEFNTSSEMTCSMQFGK---RLSAKD----- 1403
Query: 349 LASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIH-PLTAPLLGNDHSEFR 407
E+ ++L GSI +P Y+ L+ VQ RL H A L H R
Sbjct: 1404 ----EAKVMGTFFASLDGSISSLVPAKEAVYKRLQLVQTRLTRHIQHFAGLNPKGHRTVR 1459
Query: 408 SRENPVGVPK-ILDGDMLSQFLELTSTQQEAV 438
+ + + ILDG++L +F L+ TQQ +
Sbjct: 1460 NDLVSRAINRGILDGELLIKFHLLSVTQQAEI 1491
>gi|296814646|ref|XP_002847660.1| pre-mRNA-splicing factor rse1 [Arthroderma otae CBS 113480]
gi|238840685|gb|EEQ30347.1| pre-mRNA-splicing factor rse1 [Arthroderma otae CBS 113480]
Length = 1235
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 95/233 (40%), Gaps = 28/233 (12%)
Query: 219 QRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVAD 278
Q +R+ T +I+ L +RI V D ++ + + Y L D R
Sbjct: 968 QLLRKCQAQITPRVIVGLQTQGSRIIVSDVQESVTYVVYKYQENNLIPFADDIIPRWTTC 1027
Query: 279 CVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYK 338
++D +T D+ G+I +L C + + A + G A I + ++
Sbjct: 1028 TTMVDYETVAGGDKFGNIWLLRCPPKASEEADED-----------GSGAHLIHERQYLQG 1076
Query: 339 LPADDAL------GDCLASFESSQTT------IIASTLLGSIVIFIP-ISSEEYELLEAV 385
P +L D S + +Q ++ + L G++ + IP ++ ++ + + +
Sbjct: 1077 APNRLSLVAHFYSQDIPTSIQKTQLVAGGRDILVWTGLQGTVGMLIPFVTRDDVDFFQTL 1136
Query: 386 QARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ +L PL G DH +R P ++DGD+ F L + +++A+
Sbjct: 1137 EMQLTSQ--NPPLAGRDHLIYRGYYAP--CKGVIDGDLCETFFLLPNDKKQAI 1185
>gi|407039323|gb|EKE39583.1| CPSF A subunit region protein, putative [Entamoeba nuttalli P19]
Length = 1108
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 84/199 (42%), Gaps = 21/199 (10%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
+I VG G ++ +Y DA L D + ++D + + D+ GS+ +
Sbjct: 889 KIVVGTVATGFIYVNYDSDANILSITEKDRIWHSLTASTILDETSTIGFDKLGSVFITET 948
Query: 302 SDRLEDNASPECNLT-------PNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLA-SFE 353
+ S + NLT +++G++ S+ I+K D+ +
Sbjct: 949 NTN-----SNQLNLTDIIPLSNEIVQWYVGDVVTSVSVNE-IWKGITDNTNEYTFEEQIK 1002
Query: 354 SSQTTIIASTLLGSIVIFIPIS-SEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
++ II S L+G I + IP + E+ E ++ + I +PLL N +R P
Sbjct: 1003 ENKNVIIYSCLMGRIGVLIPFNFREDVEFFSKLE--MEIKNNYSPLLSNSFDSYRGTNYP 1060
Query: 413 -VGVPKILDGDMLSQFLEL 430
+GV +DGD+ F ++
Sbjct: 1061 GIGV---IDGDLCDYFNQM 1076
>gi|410079495|ref|XP_003957328.1| hypothetical protein KAFR_0E00390 [Kazachstania africana CBS 2517]
gi|372463914|emb|CCF58193.1| hypothetical protein KAFR_0E00390 [Kazachstania africana CBS 2517]
Length = 1267
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 15/143 (10%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
RIAVGD + + Y + + + + + D +R V +D T + D+ G+I L
Sbjct: 1009 RIAVGDNYESVTVYEFDKQSNEFIPLADDTIKRSVTALAFLDELTVIGGDKYGNIWTL-- 1066
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE-------S 354
RL ++ P N N ++ +I + F KL + D SF S
Sbjct: 1067 --RLPEDTDP-VNTEINS---FRDLPKNIMECPFKLKLKNHFYVNDIPMSFHVIESLQRS 1120
Query: 355 SQTTIIASTLLGSIVIFIPISSE 377
+ T++ S L G+I IFIPI S+
Sbjct: 1121 DRVTVLYSGLQGTIGIFIPILSK 1143
>gi|67473926|ref|XP_652712.1| splicing factor 3b subunit 3 [Entamoeba histolytica HM-1:IMSS]
gi|56469590|gb|EAL47325.1| splicing factor 3b subunit 3, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 1108
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 84/199 (42%), Gaps = 21/199 (10%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
+I VG G ++ +Y DA L D + ++D + + D+ GS+ +
Sbjct: 889 KIVVGTVATGFIYVNYDSDANILSITEKDRIWHSLTASTILDETSTIGFDKLGSVFITET 948
Query: 302 SDRLEDNASPECNLT-------PNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLA-SFE 353
+ S + NLT +++G++ S+ I+K D+ +
Sbjct: 949 NTN-----SNQLNLTDIIPLSNEIVQWYVGDVVTSVSVNE-IWKGITDNTNEYTFEEQIK 1002
Query: 354 SSQTTIIASTLLGSIVIFIPIS-SEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP 412
++ II S L+G I + IP + E+ E ++ + I +PLL N +R P
Sbjct: 1003 ENKNVIIYSCLMGRIGVLIPFNFREDVEFFSKLE--MEIKNNYSPLLSNSFDSYRGTNYP 1060
Query: 413 -VGVPKILDGDMLSQFLEL 430
+GV +DGD+ F ++
Sbjct: 1061 GIGV---IDGDLCDYFNQM 1076
>gi|403178252|ref|XP_003336695.2| hypothetical protein PGTG_18491 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375164075|gb|EFP92276.2| hypothetical protein PGTG_18491 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1149
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 113/272 (41%), Gaps = 30/272 (11%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVG----RTRFM 232
LRL Y V A+ ++ YFL + G Y F D R AVG +
Sbjct: 876 LRLRYYEETKACVTAV-DAINGYFLHTMGQKLYAKCFEQDE----RLLAVGFLDIKPYTT 930
Query: 233 IMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQI---YCDPSQRLVADCVLMDVDTAVV 289
M + +F I +GD GI ++ E+ KL ++ Y D + D +++D A+V
Sbjct: 931 CMRIFKNF--ILLGDAVKGITLVAFQEEPYKLIELGHTYVDLKCSTI-DFLVIDGKLAIV 987
Query: 290 -SDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDC 348
+D G I + + ++ + L + E+ S++ G +L A D
Sbjct: 988 ATDLNGVIRIFEYNPTNIESQGGQKLLCRSEFNTSSEMTCSMQFGK---RLSAKD----- 1039
Query: 349 LASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIH-PLTAPLLGNDHSEFR 407
E+ ++L GSI +P Y+ L+ VQ RL H A L H R
Sbjct: 1040 ----EAKVMGTFFASLDGSISSLVPAKEAVYKRLQLVQTRLTRHIQHFAGLNPKGHRTVR 1095
Query: 408 SRENPVGVPK-ILDGDMLSQFLELTSTQQEAV 438
+ + + ILDG++L +F L+ TQQ +
Sbjct: 1096 NDLVSRAINRGILDGELLIKFHLLSVTQQAEI 1127
>gi|350584885|ref|XP_003126937.3| PREDICTED: splicing factor 3B subunit 3-like [Sus scrofa]
Length = 425
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 41/158 (25%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
R+ V D ++ ++ Y + +L D R V L+D DT +D+ G+I C
Sbjct: 283 RVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI----C 338
Query: 302 SDRLEDNASPECNLTP------------NCA---------YHMGEIAVSIRKGSFIYKLP 340
RL N + E + P N A YH+GE +S++K + I
Sbjct: 339 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI---- 394
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE 378
+++ +TL G I I +P +S E
Sbjct: 395 ------------PGGSESLVYTTLSGGIGILVPFTSHE 420
>gi|340367935|ref|XP_003382508.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Amphimedon
queenslandica]
Length = 1160
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 92/233 (39%), Gaps = 44/233 (18%)
Query: 163 SCDGIKLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVR 222
S DG KLE T QL + +A+ P+ R L G + + + +R
Sbjct: 890 SPDGSKLEHVHTTQLD--------DVPIAMAPFQGR-LLVGVGKLLRI--YDIGKKKMLR 938
Query: 223 RFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLM 282
+ ++++ + R+ VGD ++ + F Y +L + R ++
Sbjct: 939 KCENKHLPYLVVDIKVMGRRVYVGDVQEAVHFLYYRPHENQLVIFADEVVPRFCTTSCIL 998
Query: 283 DVDTAVVSDRKGSIAVL----SCSDRLEDNASPECNLTPN-------------CAYHMGE 325
D +T +D+ G+I +L +D+++++ S +L +YH+GE
Sbjct: 999 DYNTVASADKFGNITILRLPSDVTDQVDEDPSGSRSLWDRGFLNGATQKANVMTSYHVGE 1058
Query: 326 IAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE 378
++ K S I ++ +TL GSI I +P SS+E
Sbjct: 1059 GINTLHKVSLI----------------PGGSEVLVYTTLSGSIGILVPFSSKE 1095
>gi|259155222|ref|NP_001158852.1| DNA damage-binding protein 1 [Salmo salar]
gi|223647700|gb|ACN10608.1| DNA damage-binding protein 1 [Salmo salar]
Length = 1139
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 101/249 (40%), Gaps = 22/249 (8%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
M + L I VGD +L +Y E+I D + ++ ++D D + +
Sbjct: 908 IMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGA 967
Query: 291 DRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLA 350
+ ++ V D +L +H+GE GS + + LG+
Sbjct: 968 ENAFNLFVCQ-KDSAATTDEERQHLQEVGVFHLGEFVNVFSHGSLVLQ-----NLGE--- 1018
Query: 351 SFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARL-----AIHPLTAPLLGNDHSE 405
S +Q +++ T+ G I + +S Y LL +Q RL ++ + + H+E
Sbjct: 1019 SSTPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTE 1078
Query: 406 FRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQ 465
R E G +DGD++ FL+L + + V+S + S ++ V +
Sbjct: 1079 -RKTEQATG---FIDGDLIESFLDLGRAKMQEVVS----TLQIDDGSGMKREATVDEVIK 1130
Query: 466 VVQLLERVH 474
+V+ L R+H
Sbjct: 1131 IVEELTRIH 1139
>gi|241260143|ref|XP_002404926.1| DNA repair protein xp-E, putative [Ixodes scapularis]
gi|215496735|gb|EEC06375.1| DNA repair protein xp-E, putative [Ixodes scapularis]
Length = 1148
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 80/209 (38%), Gaps = 24/209 (11%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD + +Y E+I D + ++D DT + ++ ++ V
Sbjct: 921 ILVGDLMRSMSLLAYKPLEGSFEEIARDYQTNWMCAVEILDDDTFLGAESTTNLFVCQ-K 979
Query: 303 DRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIAS 362
D +L +H+GE R GS + + P + + +Q +++
Sbjct: 980 DSAATTDEDRQHLQEVGQFHLGEFVNIFRHGSLVMQHPGEAS--------SPTQGSVLFG 1031
Query: 363 TLLGSIVIFIPISSEEYELLEAVQARLA------------IHPLTAPLLGNDHSEFRSRE 410
T+ G+I + + S+ Y L VQ L ++P S R E
Sbjct: 1032 TIHGAIGLVAQLPSDFYNFLLEVQGNLTKVIKSVGKIDHTLYPFVRLFTWRSFSTERKTE 1091
Query: 411 NPVGVPKILDGDMLSQFLELTSTQQEAVL 439
G +DGD++ FL+L+ + + VL
Sbjct: 1092 QAQG---FIDGDLIESFLDLSRDKMQEVL 1117
>gi|344300987|gb|EGW31299.1| hypothetical protein SPAPADRAFT_140061 [Spathaspora passalidarum NRRL
Y-27907]
Length = 1107
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 80/193 (41%), Gaps = 13/193 (6%)
Query: 241 TRIAVGDCRDGILFYS-YHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL 299
+RI + D + Y+ + + D +R V V +D DT + D+ G+I V
Sbjct: 896 SRIVITDAHSSSISYAKFDTGLNQFVGFADDVIKRQVTAIVSVDYDTVISGDKFGNIRVS 955
Query: 300 SCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTI 359
+ + + ++ + IY + D S+ I
Sbjct: 956 RVDEEVSKQTDEHWSFIKQSDGLFNSTGSKLKSLASIY-------VHDTPIKMMKSKDCI 1008
Query: 360 IASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKI 418
+ + L+G+I FIP +++ E + L ++ LA+ LL DH + RS +PV +
Sbjct: 1009 VWTGLMGTIGSFIPLLTTSEVDWLRKLE--LAMRNQVVNLLEKDHLKSRSYYDPVKC--V 1064
Query: 419 LDGDMLSQFLELT 431
+DGD+L + L+
Sbjct: 1065 IDGDLLEMYYSLS 1077
>gi|195996153|ref|XP_002107945.1| hypothetical protein TRIADDRAFT_18324 [Trichoplax adhaerens]
gi|190588721|gb|EDV28743.1| hypothetical protein TRIADDRAFT_18324 [Trichoplax adhaerens]
Length = 1134
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 99/235 (42%), Gaps = 20/235 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I +GD I +Y ++E I + + ++D D+ + + S + +C
Sbjct: 917 ILIGDLMRSISLCAYRPMNNEIELICKNNDPNWMTAVEIIDDDSYLGGEN--SHNLFTCQ 974
Query: 303 DRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIAS 362
+ + +L YH+GE R+GS + + D +S Q +I+
Sbjct: 975 KNSSSSEEEQKHLPTVGVYHVGEFVNVFRQGSLVMQNTVDIP--------DSVQGSILFG 1026
Query: 363 TLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVP---KIL 419
T+ G++ + + ++ +E + A+ +L+ + + +H +RS N +
Sbjct: 1027 TVSGAVGVVVTLAPAMFEFVSAIANKLS--TVVKGVGKIEHQFWRSFSNDRKTEPCQSFV 1084
Query: 420 DGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLERVH 474
DGD++ FL+L+ + V + TI+ + P+ V + V+ L R+H
Sbjct: 1085 DGDLVESFLDLSPEDMQRVANGL-----TIQTADGTRPAMVEDVLKTVEELSRIH 1134
>gi|440294229|gb|ELP87246.1| splicing factor 3B subunit, putative [Entamoeba invadens IP1]
Length = 1168
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 78/191 (40%), Gaps = 14/191 (7%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
+I + DGI F +++ ++ + IY D R V + + + SD+ G I V
Sbjct: 952 KIQLVGISDGISFVRFNQTKQEFD-IYADTLPRWTVKSVALTPTSYIGSDKFGQIFVEGL 1010
Query: 302 SDRLEDNASP--ECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALG--DCLASFESSQT 357
E+NAS L+ + G ++ F D A G +C + Q
Sbjct: 1011 DKETEENASNIFSSILSGEKTIYNGAKYKAVSLNEFYL---GDIATGFVNCCVRIGAPQI 1067
Query: 358 TIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVP 416
I+ S LLG I IP++ E E E ++ + + G DH +RS P V
Sbjct: 1068 FIV-SHLLGGISALIPLNGFGEIEFFEQLEMHMRVRHQNVN--GRDHIAYRSSVVP--VK 1122
Query: 417 KILDGDMLSQF 427
I DGD+ F
Sbjct: 1123 GIFDGDLCELF 1133
>gi|223647932|gb|ACN10724.1| DNA damage-binding protein 1 [Salmo salar]
Length = 1139
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 101/249 (40%), Gaps = 22/249 (8%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
M + L I VGD +L +Y E+I D + ++ ++D D + +
Sbjct: 908 IMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGA 967
Query: 291 DRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLA 350
+ ++ V D +L +H+GE GS + + LG+
Sbjct: 968 ENAFNLFVCQ-KDSAATTDEERQHLQEVGVFHLGEFVNVFSHGSLVLQ-----NLGE--- 1018
Query: 351 SFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARL-----AIHPLTAPLLGNDHSE 405
S +Q +++ T+ G I + +S Y LL +Q RL ++ + + H+E
Sbjct: 1019 SSTPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTE 1078
Query: 406 FRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQ 465
R E G +DGD++ FL+L + + V+S + S ++ V +
Sbjct: 1079 -RKTEQATG---FIDGDLIESFLDLGRAKMQEVVS----TLQIDDGSGMKREATVDEVIK 1130
Query: 466 VVQLLERVH 474
+V+ L R+H
Sbjct: 1131 IVEELTRIH 1139
>gi|161899297|ref|XP_001712875.1| splicing factor 3b [Bigelowiella natans]
gi|75756369|gb|ABA27263.1| splicing factor 3b [Bigelowiella natans]
Length = 1158
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 22/204 (10%)
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLS 300
R+ + D +G++ Y+ + + R + + +D DT + +D G++ V
Sbjct: 948 NRMVISDFLEGLIVTEYNTHLDTMIVVGYSVYGRSLNNIQFLDYDTILGTDYFGNVLVFR 1007
Query: 301 CSDRLEDNA--SPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTT 358
+ + P N +Y + + + SF Y+ G +S +
Sbjct: 1008 IPQLITFKSFLDPRKYQDLNSSYIYKSEPIHV-ECSFFYR-------GKYYRYIKSIEI- 1058
Query: 359 IIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDH----SEFRSRENPVG 414
II T LGSI I IPI ++ E V R + LT LG +H S F+ R +
Sbjct: 1059 IIYFTNLGSIGILIPIKTK----FEIVLFRNLFYHLT---LGTNHFLSLSNFKFRSSNYI 1111
Query: 415 VPKILDGDMLSQFLELTSTQQEAV 438
+++DGD SQ LE + Q +
Sbjct: 1112 SSRVIDGDFCSQILEFKKSTQLKI 1135
>gi|166158025|ref|NP_001107422.1| damage-specific DNA binding protein 1, 127kDa [Xenopus (Silurana)
tropicalis]
gi|157422734|gb|AAI53474.1| Zgc:63840 protein [Danio rerio]
gi|163916541|gb|AAI57552.1| LOC100135265 protein [Xenopus (Silurana) tropicalis]
Length = 306
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 104/249 (41%), Gaps = 24/249 (9%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
M + L I VGD +L +Y E+I D + ++ ++D D + ++
Sbjct: 76 MALYLKTKGDFILVGDLMRSVLLLAYKPMEGSFEEIARDFNPNWMSAVEILDDDNFLGAE 135
Query: 292 RKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLAS 351
++ V D +L +H+GE GS + + LG+ S
Sbjct: 136 NAFNLFVCQ-KDSAATTDEERQHLQEVGLFHLGEFVNVFSHGSLVLQ-----NLGE---S 186
Query: 352 FESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARL-----AIHPLTAPLLGNDHSEF 406
+Q +++ T+ G I + +S Y LL +Q RL ++ + + H+E
Sbjct: 187 STPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTE- 245
Query: 407 RSRENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPI-PVNQ 465
R E G +DGD++ FL+L + + V+S TL I S + + + V +
Sbjct: 246 RKTEQATG---FIDGDLIESFLDLGQAKMQEVVS-TL----QIDDGSGMKREATVDEVIK 297
Query: 466 VVQLLERVH 474
+V+ L R+H
Sbjct: 298 IVEELTRIH 306
>gi|357496593|ref|XP_003618585.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355493600|gb|AES74803.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 702
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 108/265 (40%), Gaps = 30/265 (11%)
Query: 177 LRLAYSTTWPGMVLAICPYLDRYFLASAGNA--FYVCGFPNDNPQRVRRFAVGRTRFMIM 234
L L + T G+ LA+ + R LA G FY G + +R++ I+
Sbjct: 444 LELLHKTQVEGVPLALSQFQGR-LLAGIGPVLRFYDLG----KRRLLRKYENKLFPNTIV 498
Query: 235 LLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKG 294
+ + RI VGD ++ + Y D +L D R + +D DT +
Sbjct: 499 SIQTYRDRIYVGDTQESFHYCKYRWDENQLYIFADDCVPRWLTASYHIDFDTMAGIEEDP 558
Query: 295 SIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFES 354
+ + ++ + N +P + +H+G++ ++K S I P G+C
Sbjct: 559 TGGRIKW-EQGKLNGAPN-KVEEIVQFHVGDVISCLQKASLI---PGG---GEC------ 604
Query: 355 SQTTIIASTLLGSI-VIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPV 413
I+ T++GSI + S ++ + ++ + + PL G DH +RS P
Sbjct: 605 ----ILNGTVMGSIGALHAFTSRDDVDFFSHLE--MHMRQDNPPLCGRDHMAYRSAYFP- 657
Query: 414 GVPKILDGDMLSQFLELTSTQQEAV 438
V ++DGD+ QF L Q +
Sbjct: 658 -VKDVIDGDLCEQFPTLPMDLQRKI 681
>gi|452824086|gb|EME31091.1| DNA damage-binding protein 1 isoform 2 [Galdieria sulphuraria]
Length = 1150
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 88/214 (41%), Gaps = 23/214 (10%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I +GD + +Y +E + D + ++D+D + ++ ++ L
Sbjct: 920 ILIGDLVRSVSLLAYKPMNGTIEDVARDIDPSWITVIEMLDLDYYISAENCFNLFTLK-- 977
Query: 303 DRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDA-------------LGD 347
R D ++ E L YH+GE+ IR G + ++P D
Sbjct: 978 -RNSDASTEEERSRLEKVGEYHLGELVNRIRHGRLVLQIPESGISILKSLLYGMYICFDD 1036
Query: 348 CLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFR 407
L + T G++ + I + ++ L ++Q A++ + + G H ++R
Sbjct: 1037 NLKELFMHKYRFNLGTANGALGVIASIDEKTFQFLHSLQT--ALNEVIKGVGGIQHEDWR 1094
Query: 408 --SRENPVGVPK-ILDGDMLSQFLELTSTQQEAV 438
+ E +G K LDGD++ +FL+L+ + E V
Sbjct: 1095 RFTSERRIGDSKNFLDGDLIERFLDLSRDKMELV 1128
>gi|224587439|gb|ACN58665.1| DNA damage-binding protein 1 [Salmo salar]
Length = 444
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 104/249 (41%), Gaps = 24/249 (9%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
M + L I VGD +L +Y E+I D + ++ ++D D + ++
Sbjct: 214 MALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAE 273
Query: 292 RKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLAS 351
++ V D +L +H+GE GS + + LG+ S
Sbjct: 274 NAFNLFVCQ-KDSAATTDEERQHLQEVGVFHLGEFVNVFSHGSLVLQ-----NLGE---S 324
Query: 352 FESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARL-----AIHPLTAPLLGNDHSEF 406
+Q +++ T+ G I + +S Y LL +Q RL ++ + + H+E
Sbjct: 325 STPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTE- 383
Query: 407 RSRENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPI-PVNQ 465
R E G +DGD++ FL+L + + V+S TL I S + + + V +
Sbjct: 384 RKTEQATG---FIDGDLIESFLDLGRAKMQEVVS-TL----QIDDGSGMKREATVDEVIK 435
Query: 466 VVQLLERVH 474
+V+ L R+H
Sbjct: 436 IVEELTRIH 444
>gi|403224220|dbj|BAM42350.1| splicing factor 3b subunit [Theileria orientalis strain Shintoku]
Length = 1272
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 110/280 (39%), Gaps = 57/280 (20%)
Query: 172 TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGR--- 228
T ++L + T G + Y ++ L + G R+R +A+G+
Sbjct: 1002 TSGMNIKLLHVTNTKGWIRCFNNYENKLLLCAIGT-------------RLRMYALGKKQL 1048
Query: 229 ---------TRFMIMLLTAHFTRIAVGDCRDGILFYS---YHEDARKLEQIYCDPSQRLV 276
T + M + +RI GD R+ + Y E+ + E R +
Sbjct: 1049 LLKGEHRSLTNYGFMDIKVIGSRIYCGDIRESVQLLRIKFYGEETGEFEMTATSTGPRWL 1108
Query: 277 ADCVLMDVDTAVVSDRKGSIAVLSC---SDRLEDNASPECNLTPNCAYHMGEIAVSIRKG 333
+ L+D T + +D+ S+ V D + +N N +H+ ++ S+ K
Sbjct: 1109 STMELLDYSTVMAADKFDSVFVARVPNNEDVVRNNYFEYQN-----QFHLSDLVTSLSK- 1162
Query: 334 SFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISS-EEYELLEAVQARLAIH 392
+ + G+ ++ ST+LGS+ F+ +S +E + L+ ++ LA
Sbjct: 1163 -----VKLNSVYGEL----------VVYSTILGSLGAFVTFTSKDEVDFLQHLEMLLANE 1207
Query: 393 PLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTS 432
T L G + RS P V ++DGD+ + L+S
Sbjct: 1208 LDT--LSGREAQMHRSYYFP--VQNVIDGDLCELYFNLSS 1243
>gi|330792580|ref|XP_003284366.1| hypothetical protein DICPUDRAFT_86223 [Dictyostelium purpureum]
gi|325085712|gb|EGC39114.1| hypothetical protein DICPUDRAFT_86223 [Dictyostelium purpureum]
Length = 1064
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 87/207 (42%), Gaps = 19/207 (9%)
Query: 227 GRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDT 286
G T + + HF + VGD + E+ L QI +P + +++ D
Sbjct: 843 GHTMILKLASRGHF--MLVGDMMKSMSLLGQSENG-SLVQIAKNPQPIWIRSIAMINDDY 899
Query: 287 AVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALG 346
+ S+ + V+ ++ + E L YH+GE S+ GS + +LP DA
Sbjct: 900 FIGSETSNNFVVVKKNNDSTNELEREL-LDSVGHYHIGESINSMLCGSLV-RLPDSDA-- 955
Query: 347 DCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEF 406
TI+ +++ GSI + IS E+YE +Q ++ + + G H +
Sbjct: 956 -------PPIPTILYASVNGSIGVIASISKEDYEFFSKLQK--GLNRVVNGIGGFTHESW 1006
Query: 407 RSREN---PVGVPKILDGDMLSQFLEL 430
R+ N V +DGD++ F +L
Sbjct: 1007 RAFSNDHHTVESRNFIDGDLIEMFPDL 1033
>gi|303271531|ref|XP_003055127.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463101|gb|EEH60379.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1223
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 84/206 (40%), Gaps = 12/206 (5%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y D +E+ D + + +D +T + ++ ++ V
Sbjct: 1001 IVVGDLMKSISLLVYKPDEGVIEERARDFNPNWMTAVCALDDETYLGAENSFNLFTVRKN 1060
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQT--TI 359
SD D ++ YH+GE R GS + +LP D ++S T
Sbjct: 1061 SDAAADEERSRLDVIGE--YHLGEFVNRFRAGSLVMRLPGDGDGAGLGLGLDASNEAPTQ 1118
Query: 360 IASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP-----VG 414
+ T+ G+I + + + L A+Q A++ + + + G H +RS N V
Sbjct: 1119 LFGTVNGAIGVVASLPESTHTFLAALQK--AMNKVVSGVGGFSHDAWRSFHNEHRSRLVE 1176
Query: 415 VPKILDGDMLSQFLELTSTQQEAVLS 440
+DGD++ FL+L + V S
Sbjct: 1177 ARGFVDGDLIESFLDLRPEKASEVAS 1202
>gi|357623954|gb|EHJ74904.1| putative DNA repair protein xp-e [Danaus plexippus]
Length = 1128
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 101/236 (42%), Gaps = 21/236 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD + Y + E+I D S + ++D DT + ++ ++ V
Sbjct: 910 ILVGDLMRSMSLLQYKQMEGSFEEIARDYSPNWMTAVEILDDDTFLGAENSFNLFVCQ-K 968
Query: 303 DRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIAS 362
D + +H+G++ +R+G+ + +L AD A ++ +
Sbjct: 969 DSAATTDEERQQMGYMGQFHVGDMVNVMRRGALVAQL-ADTA--------APVARPVLLA 1019
Query: 363 TLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGN-DHSEFRSRENPVGVP---KI 418
T+ G+I + + +S E ++ L ++ RL H + + +G HS +RS +
Sbjct: 1020 TVSGAICLVVQLSQELFDFLHQLEERLT-HTIKS--VGKIPHSFWRSFNTDIKTEPAEGF 1076
Query: 419 LDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLERVH 474
+DGD++ FL+L+ Q+ TL + ++ + ++V+ L R+H
Sbjct: 1077 IDGDLIESFLDLSRDMQQE----TLQGLQIDDGGGMMRDATVDDLIKIVEDLTRIH 1128
>gi|385865228|gb|AFI92852.1| DNA damage-binding protein 1 [Danio rerio]
Length = 1140
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 101/249 (40%), Gaps = 22/249 (8%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
M + L I VGD +L +Y E+I D + ++ ++D D + +
Sbjct: 909 IMALYLKTKGDFILVGDLMRSVLLLAYKPMEGSFEEIARDFNPNWMSAVEILDDDNFLGA 968
Query: 291 DRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLA 350
+ ++ V D +L +H+GE GS + + LG+
Sbjct: 969 ENAFNLFVCQ-KDSAATTDEERQHLQEVGLFHLGEFVNVFSHGSLVLQ-----NLGE--- 1019
Query: 351 SFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARL-----AIHPLTAPLLGNDHSE 405
S +Q +++ T+ G I + +S Y LL +Q RL ++ + + H+E
Sbjct: 1020 SSTPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTE 1079
Query: 406 FRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQ 465
R E G +DGD++ FL+L + + V+S + S ++ V +
Sbjct: 1080 -RKTEQATG---FIDGDLIESFLDLGRAKMQEVVS----TLQIDDGSGMKREATVDEVIK 1131
Query: 466 VVQLLERVH 474
+V+ L R+H
Sbjct: 1132 IVEELTRIH 1140
>gi|395324102|gb|EJF56549.1| hypothetical protein DICSQDRAFT_93527 [Dichomitus squalens LYAD-421
SS1]
Length = 1433
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 111/274 (40%), Gaps = 29/274 (10%)
Query: 175 WQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIM 234
W+L+L G V +C ++ Y ++S G +V F D +R+ A +
Sbjct: 1157 WRLKLLCRDDAKGPVSFLC-GMNGYLVSSMGQKIFVRAFDLD--ERLVGVAFLDVGVYVT 1213
Query: 235 LLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLV--ADCVLMDVDTAVVSDR 292
L A + +GD + F ++ ED KL + DP V AD D ++V+
Sbjct: 1214 SLRAVKNLLVIGDAVKSVWFVAFQEDPYKLVILGKDPHHCCVTRADLFFADGHLSIVTCD 1273
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASF 352
+ + L D + + +L +H G+ R + + P GD
Sbjct: 1274 EEGVVRLYAYDPHDPESKGGQHLLRRTEFH-GQ--TEYRSSLLVARRP---KAGDP---- 1323
Query: 353 ESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARL--------AIHPLTAPLLGNDHS 404
E Q +I ++ GS+ + ++ L +Q +L A++P ++ N
Sbjct: 1324 EIPQARLICGSVDGSLTTLTYVDENAFKRLHLLQGQLIRTVQHVAALNPKAFRMVRN--- 1380
Query: 405 EFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
E+ SR GV LDG++L+ F +L +Q V
Sbjct: 1381 EYVSRPLSKGV---LDGNLLATFEDLPIGRQNEV 1411
>gi|170057515|ref|XP_001864517.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876915|gb|EDS40298.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1138
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 107/247 (43%), Gaps = 43/247 (17%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + E+I D + + ++D D + ++ ++ V C
Sbjct: 920 ILVGDLMRSITLLQYKQMEGSFEEIARDYQPKWMTAVEILDDDAFLGAENSNNLFV--C- 976
Query: 303 DRLEDNASP---ECNLTPNCA-YHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTT 358
L+D+A+ E P A +H+G++ R GS + + +G+ +
Sbjct: 977 --LKDSAATTDDERQQMPEVAQFHLGDMVNVFRHGSLVMQ-----NIGE---RTTPTSGC 1026
Query: 359 IIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGN-DHSEFRS------REN 411
++ T+ G+I + I + YE L +Q L T +G DH+ +RS EN
Sbjct: 1027 VLFGTVSGAIGLVTQIPPDYYEFLRKLQENLTN---TIKSVGRIDHTYWRSFHTEMKTEN 1083
Query: 412 PVGVPKILDGDMLSQFLELTSTQ-QEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLL 470
G +DGD++ FL+LT + EA L + T K ++ V+ +++++
Sbjct: 1084 SEG---FIDGDLVESFLDLTREKMHEAALGLQIDVEGTKKEAN---------VDDIIKIV 1131
Query: 471 E---RVH 474
E R+H
Sbjct: 1132 EDLTRIH 1138
>gi|240277254|gb|EER40763.1| cleavage factor two protein 1 [Ajellomyces capsulatus H143]
Length = 1408
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 245 VGDCRDGILFYSYHEDARKLEQIYCDPS--QRLVADCVLMDVDT--AVVSDRKGSIAVLS 300
+GD G+ F Y E+ KL D Q + AD L D + +V+D +I VL
Sbjct: 1185 MGDALKGLWFAGYSEEPYKLSLFSKDDGTLQVMAAD-FLPDGNRLYILVADDDCNIHVLQ 1243
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSI----RKGSFIYKLP-ADDALGDCLASFESS 355
D + +S L + G A ++ R + + P AD + D +S
Sbjct: 1244 Y-DPEDPGSSKGDRLLHRSTFQTGHFASTMTLLPRTATSSSQGPDADPDMMDLDSSGPLH 1302
Query: 356 QTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRE-NPVG 414
+ + T GSI + P+S Y L A+Q++LA + L P G + FR+ E + +G
Sbjct: 1303 HVLVTSET--GSIALITPVSETSYRRLSALQSQLA-NTLEHP-CGLNPRAFRAVESDGIG 1358
Query: 415 VPKILDGDMLSQFLELTSTQQEAVLSFTLGS 445
++DGD++ ++L+L TQ++A ++ +G+
Sbjct: 1359 GRGMVDGDLVKRWLDL-GTQRKAEIANRVGA 1388
>gi|195449948|ref|XP_002072297.1| GK22405 [Drosophila willistoni]
gi|194168382|gb|EDW83283.1| GK22405 [Drosophila willistoni]
Length = 1140
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 112/276 (40%), Gaps = 23/276 (8%)
Query: 204 AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARK 263
AG +V + N + +R + + L A I VGD I + +
Sbjct: 883 AGIGSFVRLYEWTNEKELRMECNIQNMIAALYLKAKGDFILVGDLMRSITLLQHKQMEGI 942
Query: 264 LEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCA-YH 322
+I D + + ++D DT + S+ G++ V C E L P A +H
Sbjct: 943 FVEIARDCEPKWMRAVEILDDDTFLGSETNGNLFV--CQKDSAATTDEERQLLPELARFH 1000
Query: 323 MGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELL 382
+G+ R GS + + +G+ ++ T G+I I I + Y+ L
Sbjct: 1001 LGDTVNVFRHGSLVMQ-----NVGERTTPINGC---VLYGTCNGAIGIVTQIPQDFYDFL 1052
Query: 383 EAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVP---KILDGDMLSQFLELTSTQ-QEAV 438
++ RL + + +H+ +R+ + V +DGD++ FL+L+ + +EAV
Sbjct: 1053 HGLEERLK--KIIKSVGKIEHTYYRNFQINTKVEPSEGFIDGDLIESFLDLSRDKMREAV 1110
Query: 439 LSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLERVH 474
L L + K++ V ++V+ L R+H
Sbjct: 1111 LGLELTLYGERKSADVE------DVIKIVEDLTRMH 1140
>gi|156389050|ref|XP_001634805.1| predicted protein [Nematostella vectensis]
gi|156221892|gb|EDO42742.1| predicted protein [Nematostella vectensis]
Length = 1157
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 27/210 (12%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD + Y ++I D S + + ++D DT + ++ S + +C+
Sbjct: 934 ILVGDLMRSMTLLVYLPLEGSFQEIAHDFSPKWMTAIEILDDDTFLGAEN--SYNLFTCT 991
Query: 303 -DRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
D +L YH+GE R GS + + P GD F Q ++
Sbjct: 992 KDSGATTDEERYHLQDAGQYHLGEFVNVFRHGSLVMEHP-----GDASTPF---QGCVLF 1043
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEF-----------RSRE 410
T+ G I I I+ + + L VQ +L + + + DHS + R E
Sbjct: 1044 GTVNGRIGIVAQIAQDLFNFLIQVQKKL--NKVIKSVGKIDHSLYPFPHCSNLSHSRKME 1101
Query: 411 NPVGVPKILDGDMLSQFLELTSTQQEAVLS 440
G +DGD++ FL+L + E V++
Sbjct: 1102 PAHG---FIDGDLIESFLDLPRARMEEVVT 1128
>gi|348526664|ref|XP_003450839.1| PREDICTED: DNA damage-binding protein 1-like [Oreochromis niloticus]
Length = 1140
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 101/248 (40%), Gaps = 22/248 (8%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSD 291
M + L I VGD +L +Y E+I D + ++ ++D D + ++
Sbjct: 910 MALYLKTKGDFILVGDLMRSVLLLAYKSMEGNFEEIARDFNPNWMSAVEILDDDNFLGAE 969
Query: 292 RKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLAS 351
++ V D +L +H+GE GS + + LG+ S
Sbjct: 970 NAFNLFVCQ-KDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVLQ-----NLGE---S 1020
Query: 352 FESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARL-----AIHPLTAPLLGNDHSEF 406
+Q +++ T+ G I + +S Y LL +Q RL ++ + + H+E
Sbjct: 1021 STPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTE- 1079
Query: 407 RSRENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQV 466
R E G +DGD++ FL+L + + V+S + S ++ V ++
Sbjct: 1080 RKTEQATG---FIDGDLIESFLDLGRAKMQEVVS----TLQIDDGSGMKREATVDEVIKI 1132
Query: 467 VQLLERVH 474
V+ L R+H
Sbjct: 1133 VEELTRIH 1140
>gi|260790329|ref|XP_002590195.1| hypothetical protein BRAFLDRAFT_128289 [Branchiostoma floridae]
gi|229275385|gb|EEN46206.1| hypothetical protein BRAFLDRAFT_128289 [Branchiostoma floridae]
Length = 1152
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 98/237 (41%), Gaps = 17/237 (7%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC- 301
I VGD + +Y E+I D + ++ ++D D + ++ S +C
Sbjct: 928 ILVGDLMRSVTLLAYKPMEGCFEEIARDFNPNWMSAVEILDDDNFLGAEN--SFNFFTCQ 985
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
D +L +H+GE R GS + + P + + +Q +++
Sbjct: 986 KDSAATTDEERQHLQEVGHFHLGEFVNVFRHGSLVMQHPGETS--------TPTQGSVLF 1037
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRS---RENPVGVPKI 418
T+ G++ + + ++ + L+ VQ++L + + +HS +RS
Sbjct: 1038 GTVNGAVGLVTQLPADFFNFLQEVQSKLT--RVIKSVGKIEHSFWRSFNTERKTEACQGF 1095
Query: 419 LDGDMLSQFLELTSTQ-QEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLERVH 474
+DGD++ FL+L+ + QE V +G S + + ++V+ L R+H
Sbjct: 1096 IDGDLIESFLDLSRDKMQEVVQGLQVGGAIMDDGSGMKRECTVEDLIKLVEELTRIH 1152
>gi|349580241|dbj|GAA25401.1| K7_Rse1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1361
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 398 LLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQE 436
+LG DH E+RS PVG K++DGD+ FL L+ +QE
Sbjct: 1299 ILGRDHQEYRSYYAPVG--KVIDGDLCENFLRLSLNEQE 1335
>gi|281202530|gb|EFA76732.1| CPSF domain-containing protein [Polysphondylium pallidum PN500]
Length = 933
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 359 IIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPK 417
++ +TL G+I +P +S E+ + +++ L + PL G DH +RS PV
Sbjct: 833 LVYATLNGTIGALVPFVSREDVDFYTSLE--LQMRQENPPLCGRDHLAYRSYYFPV--KN 888
Query: 418 ILDGDMLSQFLELTSTQQEAV 438
++DGD+ Q++ L T+Q+++
Sbjct: 889 VIDGDLCEQYISLDPTKQQSI 909
>gi|313232279|emb|CBY09388.1| unnamed protein product [Oikopleura dioica]
Length = 1451
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 117/280 (41%), Gaps = 41/280 (14%)
Query: 175 WQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIM 234
++ + + + G V A+ LD +A+ G ++ F +DN + T F+
Sbjct: 1166 YKYKTVFDASQRGPVSAV-DSLDGALIAAIGQKVFIHAFQDDN--------LRATGFVDT 1216
Query: 235 LLTAHFTR-----IAVGDCRDGILFYSYHEDARKLEQI-YCDPSQRLVADCVLMDVDTA- 287
L H T VGD + GI + + + QI + + A +L+D +
Sbjct: 1217 QLYTHATHCFKNYALVGDIQQGITLLRHQGERNCISQISRARRAGEVTAVGILLDGNQVG 1276
Query: 288 -VVSDRKGSIAV-LSCSDRLEDNASPECNLTPNCAYHMGEIAVSI-----RKGSFIYKLP 340
V +D + ++ V + D+ E N + L ++G+ +SI R+ K+
Sbjct: 1277 LVSTDMQRNLQVYMYKPDQKESNGGKQ--LVRQADINLGKRVISIWNSLGRQNDTFTKV- 1333
Query: 341 ADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIH-PLTAPLL 399
L ++ T A L GSI +P+S + + LE +Q + H P L
Sbjct: 1334 -------ALTENDARHVTFYAG-LDGSIGDIVPVSEKVFRRLEMLQTLVQSHLPHYGGLN 1385
Query: 400 GNDH----SEFRSRENPVGVPKILDGDMLSQFLELTSTQQ 435
++ +E+R EN I+DGD+L +F L+ T+Q
Sbjct: 1386 PREYRYCTNEYRDLEN--AAKNIIDGDLLERFNGLSFTEQ 1423
>gi|363750540|ref|XP_003645487.1| hypothetical protein Ecym_3168 [Eremothecium cymbalariae DBVPG#7215]
gi|356889121|gb|AET38670.1| Hypothetical protein Ecym_3168 [Eremothecium cymbalariae DBVPG#7215]
Length = 1295
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAV--- 298
RIAVGD + + + + + + D +R V +D T + DR +I V
Sbjct: 1028 RIAVGDIHESVTLFHFDKPKNMFIPVADDTVKRHVTTLRFLDECTVIGGDRFSNIWVLRL 1087
Query: 299 -LSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFE---- 353
L C ++++ + + I+ +I++ +F +KL L D S +
Sbjct: 1088 PLQCDKLIKEDFEGHLQVA------VSHISKNIKECNFKWKLLNHFYLNDIPISLQTVSS 1141
Query: 354 ---SSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQ 386
S +T II + L G++ IP I+ E EL E+V+
Sbjct: 1142 AQFSDRTNIIYTGLQGTVGCIIPLITRREVELFESVE 1178
>gi|219125301|ref|XP_002182922.1| damage-specific DNA binding protein 1 [Phaeodactylum tricornutum CCAP
1055/1]
gi|217405716|gb|EEC45658.1| damage-specific DNA binding protein 1 [Phaeodactylum tricornutum CCAP
1055/1]
Length = 1284
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 105/277 (37%), Gaps = 21/277 (7%)
Query: 172 TETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPND-NPQRVRRFAVGRTR 230
T T +R + G V +IC + D FL + + +V D R+ +G
Sbjct: 966 TSTRAVRQITEMSTQGGVYSICQFYDGNFLCTVNSKTHVVQIVADCGVLRLEYVGIGHHG 1025
Query: 231 FMIMLLTAHFTR--IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAV 288
++ L + VGD + Y+ LE++ D + ++ D +
Sbjct: 1026 HIVSLFVKSRAKPLAIVGDLMRSVSLMQYYPQHETLEEVARDFNPNWTTAVEMLTDDVYI 1085
Query: 289 VSDRKGSIAVLSCSDRLEDNASPE--CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALG 346
++ + L C R + S E C L +H+GE+ GS + + ++
Sbjct: 1086 GAENWNN---LFCLRRNKAATSEEIRCRLDNIGEFHLGEMCNKFMSGSLVMPVSSNSTTS 1142
Query: 347 DCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEF 406
A+ + T+ GS+ + + + + AI P+ G H +
Sbjct: 1143 SRRAT--------LFGTVEGSLGVILGLDGRTAAFF--ITLERAIAKTIQPVGGFSHQLY 1192
Query: 407 RSRENPVGVP---KILDGDMLSQFLELTSTQQEAVLS 440
RS + + V +DGD++ FL+L EAV++
Sbjct: 1193 RSCQAELRVHPAHGFVDGDLVETFLDLDRRTMEAVVA 1229
>gi|156049323|ref|XP_001590628.1| hypothetical protein SS1G_08368 [Sclerotinia sclerotiorum 1980]
gi|154692767|gb|EDN92505.1| hypothetical protein SS1G_08368 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1153
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 43/221 (19%)
Query: 243 IAVGDCRDGILFYSYHEDAR----KLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAV 298
IAV D + Y KLE++ Q +D DT + SD G++ V
Sbjct: 929 IAVADIMKSVALVEYTPGVDGLPDKLEEVGRHAQQVFATSIAEVDTDTYLESDHDGNLIV 988
Query: 299 LSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTT 358
L +R + L C ++GE+ I++ + E+S+
Sbjct: 989 LK-RNREGVTREDKLRLEVLCEMNLGEMVNKIKR-----------------INVETSKDA 1030
Query: 359 II-----ASTLLGSIVIFIPISSEEYELLEAVQARLAIHP--------LTAPLL---GN- 401
++ +T GSI +F I + +LL +Q+RLA P +AP+ GN
Sbjct: 1031 LLIPRAFVATTEGSIYLFSLIPPQNQDLLMRLQSRLASLPARSLTDSSFSAPIEFSPGNL 1090
Query: 402 DHSEFRSRENPV---GVP-KILDGDMLSQFLELTSTQQEAV 438
D ++RS + V P + +DG+++ +FL+L QE +
Sbjct: 1091 DFDKYRSYVSAVRETNEPFRFVDGELIERFLDLDGAIQENI 1131
>gi|390366809|ref|XP_780126.3| PREDICTED: DNA damage-binding protein 1-like isoform 1
[Strongylocentrotus purpuratus]
Length = 630
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 84/202 (41%), Gaps = 20/202 (9%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC- 301
I VGD I +Y LE+I D S ++ ++D DT + ++ ++ +C
Sbjct: 412 IVVGDLMRSITLLAYKPMEGCLEEIARDYSPNWMSAVEILDDDTFLGAENSSNL--FTCQ 469
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
D +L +H+GE R GS + + + + + +++
Sbjct: 470 KDSAATTDEERRHLQEVGLFHLGEFVNVFRHGSLVMQNIGESTI--------PTTGSVLF 521
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRS-----RENPVGVP 416
T+ GS+ + ++ E Y L VQ +L + + HS +RS + P+
Sbjct: 522 GTVSGSVGLVTQLNEEFYRFLLEVQNKLT--KVIKSVGKIKHSFWRSFYSERKTEPM--D 577
Query: 417 KILDGDMLSQFLELTSTQQEAV 438
+DGD+L FL+L+ + V
Sbjct: 578 NFIDGDLLESFLDLSRDTMDEV 599
>gi|209881602|ref|XP_002142239.1| CPSF A subunit domain-containing protein [Cryptosporidium muris RN66]
gi|209557845|gb|EEA07890.1| CPSF A subunit domain-containing protein [Cryptosporidium muris RN66]
Length = 1509
Score = 41.2 bits (95), Expect = 1.1, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
+ VGD + + Y + A++ E+I DPS V D + ++ + +VSD ++ +L+
Sbjct: 1231 LLVGDLMRSVGLWKYDKVAKQFEEICRDPSLAWVMDGIFINKNLYMVSDENKNVRILT-- 1288
Query: 303 DRLEDNASPECN--LTPNCAYHMGEIAVSIRKGSFIYKLP----ADDALG-DCLASFESS 355
+ E+ + E + L +H GEI + +KG + P + +G D S S
Sbjct: 1289 -KPENPINDEMDTVLQSIAHFHSGEIVSTFQKGKLMMPYPRCLQEINNIGLDFCHSLYSE 1347
Query: 356 QTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAI 391
Q I+ T GS+ + ++++ L+ + AI
Sbjct: 1348 Q--IVFGTAQGSMSVIFSLNADYKMFLQLIMFEEAI 1381
>gi|320587625|gb|EFX00100.1| nuclear mRNA splicing factor protein [Grosmannia clavigera kw1407]
Length = 1220
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 110/270 (40%), Gaps = 19/270 (7%)
Query: 176 QLRLAYSTTWPGMVLAICPYLDRYFLASAGNAF--YVCGFPNDNPQRVRRFAVGRTRFMI 233
QL L + T A+ + R L GN Y G Q +R+ + +I
Sbjct: 932 QLELVHKTKVEEPPTALLAFQGR-ILVGIGNVLRIYDLGI----KQMLRKAQSEVSSKLI 986
Query: 234 MLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRK 293
+ L +R+ VGD +G+ + Y + KL D +R ++D + D+
Sbjct: 987 VSLQTQGSRVVVGDVEEGVTYVVYKPEINKLLPFVDDTIKRWTTCTTMVDYQSVAGGDKF 1046
Query: 294 GSIAVLSCSDRLEDNA---SPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLA 350
G++ +L SD+ +A E L Y G R + D + C A
Sbjct: 1047 GNLWILRVSDKASQDADEPGSELQLVHARGYLHG---APNRLALMAHVYTQDVPMSICKA 1103
Query: 351 SF-ESSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRS 408
S Q ++ S L G++ +P +S ++ + + ++ + APL G DH +RS
Sbjct: 1104 SLVVGGQEVLVWSGLQGTVGALVPFVSRDDADFFQNLETHMRQE--DAPLAGRDHLMYRS 1161
Query: 409 RENPVGVPKILDGDMLSQFLELTSTQQEAV 438
P V ++DGD+ +F L +++ +
Sbjct: 1162 YYVP--VKGVIDGDLCERFNLLPREKKQMI 1189
>gi|47230701|emb|CAF99894.1| unnamed protein product [Tetraodon nigroviridis]
Length = 953
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 100/244 (40%), Gaps = 19/244 (7%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
M + L I VGD +L +Y E+I D + ++ ++D D + +
Sbjct: 729 IMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAIEILDDDNFLGA 788
Query: 291 DRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLA 350
+ ++ V D +L +H+GE GS + + LG+
Sbjct: 789 ENAFNLFVCQ-KDSAATTDEERQHLQEVGVFHLGEFVNVFCHGSLVLQ-----NLGE--- 839
Query: 351 SFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRE 410
+ +Q +++ T+ G I + +S Y LL +Q RL + + + H+E R E
Sbjct: 840 TSTPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRL--NKVIKTTWRSFHTE-RKTE 896
Query: 411 NPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLL 470
G +DGD++ FL+L + + V+S + S ++ V ++V+ L
Sbjct: 897 QATG---FIDGDLIESFLDLGRAKMQEVVS----TLQIDDGSGMKREATVDEVIKIVEEL 949
Query: 471 ERVH 474
R+H
Sbjct: 950 TRIH 953
>gi|334347169|ref|XP_001362845.2| PREDICTED: obscurin-like protein 1 [Monodelphis domestica]
Length = 2230
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 97/250 (38%), Gaps = 52/250 (20%)
Query: 253 LFYSYHEDARKLEQIYCDPSQ--------RLVADCVLMDVDTAV-------------VSD 291
L Y H+ L+ +YC PS R A L V V V
Sbjct: 290 LLYRDHDGGFVLKVLYCQPSDCGLYVCAARNTAGHTLSAVQLHVREPRVRFAVPLEDVEG 349
Query: 292 RKGSIAVLSC---------SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPAD 342
+G AVL C + ED L P Y MGE V R I+ L AD
Sbjct: 350 EEGGAAVLECQVPSRGITTTWYREDQ-----RLLPGPKYEMGEAGVMRRL--IIHDLEAD 402
Query: 343 DALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGND 402
D G L T+ A + G I +P + ++LE A L++ A +LG
Sbjct: 403 DD-GIYLCEMRGRVRTVAAVAVKGPITRRLP---RKLDVLEGENAVLSVEVRGAKVLGRW 458
Query: 403 HSEFRSRENPVGVPKILD--GDMLSQFLELTSTQQEA-VLSFTLGSFDT-----IKASSK 454
+ +E P P+I+ + + + T+Q+A V++F+LGS T +K +
Sbjct: 459 TRD--GQELPAS-PRIIQTSSNHTHTLVLVGVTRQDAGVVTFSLGSSHTSSRLRVKCMKQ 515
Query: 455 LPPSSPIPVN 464
+PP P+ V
Sbjct: 516 VPPGPPVSVE 525
>gi|66812672|ref|XP_640515.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
gi|60468551|gb|EAL66554.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
Length = 1628
Score = 41.2 bits (95), Expect = 1.3, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 359 IIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENPV----- 413
+I TL G + + P+ + Y L +Q++L P TA L + F+S
Sbjct: 1515 VIFGTLDGGLNVLRPLDEKIYLLFYHIQSKLYYLPQTAGLNPKQYRSFKSFSQNFHFSPS 1574
Query: 414 ---GVPK-ILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSK 454
+PK ILDGD++S+FL L+ +++ + + + D I S K
Sbjct: 1575 TFHQLPKFILDGDLISKFLSLSQSEKRLISNSINSTSDEIIESLK 1619
>gi|157128864|ref|XP_001655231.1| DNA repair protein xp-e [Aedes aegypti]
gi|108882186|gb|EAT46411.1| AAEL002407-PB [Aedes aegypti]
Length = 1138
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 31/241 (12%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD I Y + E+I D + ++D D + +D ++ V C
Sbjct: 920 ILVGDLMRSITLLQYKQMEGSFEEIARDYQPNWMTAVEILDDDAFLGADNSNNLFV--C- 976
Query: 303 DRLEDNASP---ECNLTPNCA-YHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTT 358
L+D A+ E P A H+G++ R GS + + +G+ +
Sbjct: 977 --LKDGAATTDDERQQMPEVAQVHLGDMVNVFRHGSLVM-----ENIGE---RTTPTSGC 1026
Query: 359 IIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGN-DHSEFRSRENPVGVPK 417
++ T+ G+I + I ++ YE L +Q L T +G DH+ +RS + +
Sbjct: 1027 VLFGTVSGAIGLVTQIPADYYEFLRKLQENLTD---TIKSVGKIDHAYWRSFHTEMKTER 1083
Query: 418 ---ILDGDMLSQFLELTSTQ-QEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLERV 473
+DGD++ FL+L+ + EA L + D K + + + ++V+ L R+
Sbjct: 1084 CEGFIDGDLVESFLDLSREKMHEAALGLQI-DVDGTKKEATVD-----DIIKIVEDLTRI 1137
Query: 474 H 474
H
Sbjct: 1138 H 1138
>gi|327304811|ref|XP_003237097.1| hypothetical protein TERG_01819 [Trichophyton rubrum CBS 118892]
gi|326460095|gb|EGD85548.1| hypothetical protein TERG_01819 [Trichophyton rubrum CBS 118892]
Length = 1398
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 13/209 (6%)
Query: 245 VGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAV---VSDRKGSIAVLSC 301
+GD G+ F Y E+ KL+ + V D + + V+D ++ VL
Sbjct: 1176 IGDAFKGLWFTGYSEEPYKLDLFGKENENLAVVDADFLPDGNKLYILVADDDCNLHVLQY 1235
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIR---KGSFIYKLPADDALGDCLASFESSQTT 358
D + ++S L +H G A ++ G+ P D+ D S S+
Sbjct: 1236 -DPEDPSSSKGDRLLRRSVFHTGHFASTVTLLPHGAHTTSSPVDEDAMDT-DSPPPSKYQ 1293
Query: 359 IIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP--VGVP 416
I+ + GSI + P+S + Y L A+Q++L ++ L P N +R+ E+ G
Sbjct: 1294 ILMTFQTGSIAVITPLSEDSYRRLLALQSQL-VNALEHPCSLNPRG-YRAVESDGMGGQR 1351
Query: 417 KILDGDMLSQFLELTSTQQEAVLSFTLGS 445
++DG++L ++L++ Q++A ++ +G+
Sbjct: 1352 GMIDGNLLLRWLDM-GAQRKAEIAGRVGA 1379
>gi|154285962|ref|XP_001543776.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407417|gb|EDN02958.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1283
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 245 VGDCRDGILFYSYHEDARKLEQIYCDPS--QRLVADCVLMDVDT--AVVSDRKGSIAVLS 300
+GD G+ F Y E+ KL D Q + AD L D + +V+D +I VL
Sbjct: 1060 MGDALKGLWFAGYSEEPYKLSLFSKDDGTLQVMAAD-FLPDGNRLYILVADDDCNIHVLQ 1118
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSI----RKGSFIYKLP-ADDALGDCLASFESS 355
D + +S L + G A ++ R + + P AD + D +S
Sbjct: 1119 Y-DPEDPGSSKGDRLLHRSTFQTGHFASTMTLLPRTATSSSQRPDADPDMMDLDSSGPLH 1177
Query: 356 QTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRE-NPVG 414
+ + T GSI + P+S Y L A+Q++L + L P G + FR+ E + +G
Sbjct: 1178 HVLVTSET--GSIALITPVSETSYRRLSALQSQLT-NTLEHP-CGLNPRAFRAVESDGIG 1233
Query: 415 VPKILDGDMLSQFLELTSTQQEAVLSFTLGS 445
++DGD++ ++L+L TQ++A ++ +G+
Sbjct: 1234 GRGMVDGDLVKRWLDL-GTQRKAEIANRVGA 1263
>gi|336476853|ref|YP_004615994.1| coenzyme F420-reducing hydrogenase subunit delta [Methanosalsum
zhilinae DSM 4017]
gi|335930234|gb|AEH60775.1| coenzyme F420-reducing hydrogenase delta subunit [Methanosalsum
zhilinae DSM 4017]
Length = 168
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 277 ADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVS--IRKGS 334
AD V++ +D+ + KGSI + S+ L+ N P N A+ M EI++S + GS
Sbjct: 61 ADKVII-IDSVITGSEKGSIIRIDGSELLKTNHDP------NPAFSMHEISLSDVLLAGS 113
Query: 335 FIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQ 386
+I KLP G + + ++ I+S +L ++ IP+ EE ++ E Q
Sbjct: 114 YIQKLPEIVVFGIEVGENTNELSSQISSKVLEAVDRIIPLIIEEMKIEENTQ 165
>gi|402586182|gb|EJW80120.1| hypothetical protein WUBG_08972 [Wuchereria bancrofti]
Length = 162
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 19/117 (16%)
Query: 322 HMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYEL 381
++G+ S++K S + DCL S TTI S ++G +V F+ S +E+E
Sbjct: 41 YIGDAITSMQKASLV------PGANDCL-----SYTTI--SGIIGILVPFM--SRDEFEF 85
Query: 382 LEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
+ ++ + + PL G DH +RS P V ++DGD+ Q+ + +Q++V
Sbjct: 86 FQNLEMHMRVE--YPPLCGRDHLAYRSYYFP--VKSVIDGDLCEQYSLMPLDKQKSV 138
>gi|156841606|ref|XP_001644175.1| hypothetical protein Kpol_1059p7 [Vanderwaltozyma polyspora DSM
70294]
gi|156114812|gb|EDO16317.1| hypothetical protein Kpol_1059p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 1346
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 95/248 (38%), Gaps = 58/248 (23%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSC 301
RIAVGD + ++ + Y+ D++ L+ I D ++R V +D T + SD+ +I L
Sbjct: 1076 RIAVGDIHESVMIFDYNSDSKTLKPIADDITKRDVISIEFLDSRTVIGSDKYSNIWTLRI 1135
Query: 302 SDRLEDNASPECNL-TPNCAYHMGEIAVS----IRKGSFIYKLPADDALGDCLASFE--- 353
LED+ N+ P +S + + F KL L D +
Sbjct: 1136 D--LEDDQKVLDNVENPMLIASENSSMISKLPNVMECPFKLKLTNHFYLNDIVTDIHIVE 1193
Query: 354 ----SSQTTIIASTLLGSIVIFIP-ISSEEYELLEAVQARLAIHPLT----APLLGND-- 402
S + I + L G+I +P ++ + L A++ ++ T +GND
Sbjct: 1194 SAHISDRPVIFYTCLQGTIGCLVPLLTKAQVTTLNAIKNEMSNIDYTFYSIQEDIGNDKK 1253
Query: 403 -----------------------------------HSEFRSRENPVGVPKILDGDMLSQF 427
HS++RS P V I+DGD+ +F
Sbjct: 1254 NYIEDKGKAREENETIINTNNTTTPEGAYSIVNRNHSKYRSYYAP--VKNIIDGDLCERF 1311
Query: 428 LELTSTQQ 435
L L S ++
Sbjct: 1312 LYLNSNER 1319
>gi|452824696|gb|EME31697.1| hypothetical protein Gasu_10760 [Galdieria sulphuraria]
Length = 1254
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 7/121 (5%)
Query: 186 PGMVLAICPYLDRYFLASAGNAFYVCGFPND-NPQRVRRFAVGRTRFMIMLLTAHFTRIA 244
PG V+ + P + L S ++ F D Q + A G TR +I+++ I
Sbjct: 983 PGAVMVVTPLDEETLLVSCNE--HLLAFAMDPQEQTLIEIARGETRGLILVIDVEHPFIF 1040
Query: 245 VGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDV----DTAVVSDRKGSIAVLS 300
VGD +D + Y H R++ + D ++LV V DR+ + VL
Sbjct: 1041 VGDRKDSVHIYCIHTSNREIVPVCQDEYRKLVVSLATQPFHDHGQLVFVGDRQAMLHVLW 1100
Query: 301 C 301
C
Sbjct: 1101 C 1101
>gi|145351726|ref|XP_001420218.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580451|gb|ABO98511.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1120
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 78/202 (38%), Gaps = 18/202 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD + Y + +++I D + + ++D D + + S+ + + +
Sbjct: 908 ILVGDLLKSMSLLQYKPEEGAIDEIARDFNANWMTAVAMLDDDETYLG-AENSLNLFTVA 966
Query: 303 DRLEDNASPE-CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
+ E L YH+GE GS + L D+L T++
Sbjct: 967 RNMNAMTDEERSRLEITGEYHLGEFVNVFSPGSLVMSLKDGDSL---------EVPTLLF 1017
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRS-----RENPVGVP 416
T G I + + + Y+ E +Q + H + G H+E+RS R
Sbjct: 1018 GTGNGVIGVLASLPKDAYDFAERLQTSMNKH--IQGVGGLKHAEWRSFRHTLRRKSDPSR 1075
Query: 417 KILDGDMLSQFLELTSTQQEAV 438
+DGD++ FL+L Q + V
Sbjct: 1076 NFVDGDLVESFLDLKVEQADVV 1097
>gi|440487047|gb|ELQ66855.1| DNA damage-binding protein 1a [Magnaporthe oryzae P131]
Length = 1213
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 15/112 (13%)
Query: 338 KLPADDALGDCLASFE------SSQTTIIASTLL----GSIVIFIPISSEEYELLEAVQA 387
++ ++ LG+C+ + S+ I+A L GSI +F ++ + LL QA
Sbjct: 1078 QMTSEFGLGECVNKIQKVMVETSANAPIVAKAFLSTTEGSIYLFGTVAPKFQSLLMDFQA 1137
Query: 388 RLAIHPLTAPLLGNDHSEFRSRENP----VGVPKILDGDMLSQFLELTSTQQ 435
+ H +++PL +++RS NP G + LDG+ L FL++ Q
Sbjct: 1138 NMEAH-VSSPLGELQFNQWRSFRNPEREGAGPERFLDGEFLEMFLDMEENTQ 1188
>gi|357135348|ref|XP_003569272.1| PREDICTED: DNA damage-binding protein 1a-like [Brachypodium
distachyon]
Length = 1074
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 84/213 (39%), Gaps = 45/213 (21%)
Query: 238 AHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIA 297
HF I VGD + Y + +E + D + + + ++D D + +D
Sbjct: 873 GHF--IVVGDMVRSVSLLRYKYEEGLIEVVTRDFNTKWITAVAMLDDDIYIGAD------ 924
Query: 298 VLSCSDRLEDNASPECNL------TPNCA--YHMGEIAVSIRKGSFIYKLPADDALGDCL 349
+C CNL P YH+G++ + GS + D +G
Sbjct: 925 --NC-----------CNLFTLHSGRPGVVGEYHLGDLVNRMHHGSLVMH-HTDSEIGQI- 969
Query: 350 ASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGN-DHSEFRS 408
T+I T+ G+I + ++Y LE +Q+ L + +GN H E+RS
Sbjct: 970 -------PTVIFGTISGAIGVIASFPYDQYVFLEKLQSVLVKFIKS---VGNLSHVEWRS 1019
Query: 409 REN---PVGVPKILDGDMLSQFLELTSTQQEAV 438
N +DGD++ FL L+ ++ E V
Sbjct: 1020 FYNVSRTAEARNFVDGDLIESFLSLSPSKMEEV 1052
>gi|223994993|ref|XP_002287180.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976296|gb|EED94623.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1517
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 103/482 (21%), Positives = 170/482 (35%), Gaps = 94/482 (19%)
Query: 5 KRLNVRKFHLGGTPKKVLYHSESRLLIV-----MRTELNNDTCSSDIC---CVDPLSGSV 56
++L+V + LG TP+++ YH R+ V NN+ ++I CV S
Sbjct: 1026 QKLHVTSYKLGMTPRRIAYHEAGRVYCVGCIDGNAKGGNNNQVGAEINMGNCVRFFDDST 1085
Query: 57 ---LSSFKLELGETGKSMELVRV-GHEQVLVVGTSLSS----------GPAIMPSGEAES 102
++ LE ET S+ V + Q L S G A E E
Sbjct: 1086 FEEINQIDLEPFETILSLVSVSLCTSSQTLTQSNSKQDTSEYKPYILIGTAYAYPDEDEP 1145
Query: 103 TKGRLIVLCIEHMQNSDCGSMTFCSKAGSSSQRTSPFREIVGYATEQLSSSSLCSSPDDA 162
T+GR++V+ +C S G A L S DD
Sbjct: 1146 TQGRILVV--------ECNS---------------------GEAEPHLKS-------DD- 1168
Query: 163 SCDGIKLEETETWQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVC--GFPNDNPQR 220
+E+T + +R G V +I P+ LA+ + ++C D
Sbjct: 1169 -----DMEDTYSRYVRHVTQMPTRGGVYSISPFYGGTVLATVNSKTHLCRLSIGCDQIGE 1223
Query: 221 VRRFAVGRTRFMIMLLTAHF------------TRIA-----VGDCRDGILFYSYHEDARK 263
++ G M+ L R A VGD I Y
Sbjct: 1224 LKFVGAGHHGHMLSLFVKSLAGSESESESSGTNRQAKQLAIVGDLMRSISLVEYQPKHNV 1283
Query: 264 LEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPE---CNLTPNCA 320
+E++ D + ++ T + S+ ++ VL R NAS E L
Sbjct: 1284 IEELARDYNANFCTAVEMLTNGTYLGSEGFNNLFVL----RHNANASSEEARVRLDTVGE 1339
Query: 321 YHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYE 380
YH+GE+ GS I + +G ++ SQT + T+ GSI + + +
Sbjct: 1340 YHLGEMTNKFMGGSLIMPSNSGGIMG-AQNAYVGSQT--LFGTVDGSIGSVLGLDGPTFA 1396
Query: 381 LLEAVQ-ARLAIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQEAVL 439
L +Q A L+I + ++ FR+ +DGD++ FL+L E ++
Sbjct: 1397 FLACLQRAILSIVKTVGDISHEEYRAFRAERQVRPSRGFIDGDLIETFLDLNRPTMERIV 1456
Query: 440 SF 441
+
Sbjct: 1457 KY 1458
>gi|389629928|ref|XP_003712617.1| hypothetical protein MGG_16867 [Magnaporthe oryzae 70-15]
gi|351644949|gb|EHA52810.1| hypothetical protein MGG_16867 [Magnaporthe oryzae 70-15]
gi|440464739|gb|ELQ34110.1| DNA damage-binding protein 1a [Magnaporthe oryzae Y34]
Length = 1183
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 15/112 (13%)
Query: 338 KLPADDALGDCLASFE------SSQTTIIASTLL----GSIVIFIPISSEEYELLEAVQA 387
++ ++ LG+C+ + S+ I+A L GSI +F ++ + LL QA
Sbjct: 1048 QMTSEFGLGECVNKIQKVMVETSANAPIVAKAFLSTTEGSIYLFGTVAPKFQSLLMDFQA 1107
Query: 388 RLAIHPLTAPLLGNDHSEFRSRENP----VGVPKILDGDMLSQFLELTSTQQ 435
+ H +++PL +++RS NP G + LDG+ L FL++ Q
Sbjct: 1108 NMEAH-VSSPLGELQFNQWRSFRNPEREGAGPERFLDGEFLEMFLDMEENTQ 1158
>gi|196012166|ref|XP_002115946.1| hypothetical protein TRIADDRAFT_59883 [Trichoplax adhaerens]
gi|190581722|gb|EDV21798.1| hypothetical protein TRIADDRAFT_59883 [Trichoplax adhaerens]
Length = 1187
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 363 TLLGSIVIFIPISSEEYELLEAVQARLAIH-PLTAPLLGNDHSEFRSRENPV--GVPKIL 419
TL GSI + +P+ +EY L ++QA+L+I+ A L FRS + + + IL
Sbjct: 1086 TLDGSIGLLLPVDEKEYRRLFSLQAKLSIYLEQNAGLNQKAFRTFRSHQKKLQNSMRNIL 1145
Query: 420 DGDMLSQFLEL 430
DGD+L ++ L
Sbjct: 1146 DGDLLKRYFHL 1156
>gi|225558298|gb|EEH06582.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 1408
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 245 VGDCRDGILFYSYHEDARKLEQIYCDPS--QRLVADCVLMDVDT--AVVSDRKGSIAVLS 300
+GD G+ F Y E+ KL D Q + AD L D + +V+D +I VL
Sbjct: 1185 MGDALKGLWFAGYSEEPYKLSLFSKDDGTLQVMAAD-FLPDGNRLYILVADDDCNIHVLQ 1243
Query: 301 CSDRLEDNASPECNLTPNCAYHMGEIAVSI----RKGSFIYKLP-ADDALGDCLASFESS 355
D + +S L + G A ++ R + + P AD + D +S
Sbjct: 1244 Y-DPEDPGSSKGDRLLHRSTFQTGHFASTMTLLPRTATSSSQGPDADPDMMDLDSSGPLH 1302
Query: 356 QTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRE-NPVG 414
+ + T GSI + P+S Y L A+Q++L + L P G + FR+ E + +G
Sbjct: 1303 HVLVTSET--GSIALITPVSETSYRRLSALQSQLT-NTLEHP-CGLNPRAFRAVESDGIG 1358
Query: 415 VPKILDGDMLSQFLELTSTQQEAVLSFTLGS 445
++DGD++ ++L+L TQ++A ++ +G+
Sbjct: 1359 GRGMVDGDLVKRWLDL-GTQRKAEIANRVGA 1388
>gi|330799483|ref|XP_003287774.1| hypothetical protein DICPUDRAFT_32967 [Dictyostelium purpureum]
gi|325082229|gb|EGC35718.1| hypothetical protein DICPUDRAFT_32967 [Dictyostelium purpureum]
Length = 1453
Score = 40.4 bits (93), Expect = 2.3, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 363 TLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRE-----NPVGV-- 415
TL GS+ + P+ Y+L +Q++L P A L + F+S +P +
Sbjct: 1344 TLDGSLNVLRPLDERMYQLFYHLQSKLYYLPQPAGLNAKQYRAFKSFSQNFHFSPSTIHQ 1403
Query: 416 -PK-ILDGDMLSQFLELTSTQQEAVLSFTLGS 445
PK ILDGD+LS+F++L ++ +L+ ++GS
Sbjct: 1404 LPKYILDGDLLSKFVKLNQKERR-LLASSVGS 1434
>gi|195145844|ref|XP_002013900.1| GL24391 [Drosophila persimilis]
gi|194102843|gb|EDW24886.1| GL24391 [Drosophila persimilis]
Length = 1140
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 99/247 (40%), Gaps = 21/247 (8%)
Query: 204 AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARK 263
AG +V + N + +R + + L A I VGD I + +
Sbjct: 883 AGIGSFVRLYEWTNEKELRMECNIQNMIAALYLKAKGDFILVGDLMRSITLLQHKQMEGI 942
Query: 264 LEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCA-YH 322
+I D + + ++D DT + S+ G++ V C E L P A +H
Sbjct: 943 FVEIARDCEPKWMRAVEILDDDTFLGSETNGNLFV--CQKDSAATTDEERQLLPELARFH 1000
Query: 323 MGEIAVSIRKGSFIYKLPADDA--LGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYE 380
+G+ R GS + + + + C ++ T G+I I I + Y+
Sbjct: 1001 LGDTVNVFRHGSLVMQNVGERTTPINGC----------VLYGTCNGAIGIVTQIPQDFYD 1050
Query: 381 LLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVP---KILDGDMLSQFLELTSTQ-QE 436
L ++ RL + + +H+ +R+ + V +DGD++ FL+L+ + ++
Sbjct: 1051 FLHGLEERLK--KIIKSVGKIEHTYYRNFQINTKVEPSEGFIDGDLIESFLDLSRDKMRD 1108
Query: 437 AVLSFTL 443
AVL L
Sbjct: 1109 AVLGLEL 1115
>gi|125774475|ref|XP_001358496.1| GA20574 [Drosophila pseudoobscura pseudoobscura]
gi|54638233|gb|EAL27635.1| GA20574 [Drosophila pseudoobscura pseudoobscura]
Length = 1140
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 99/247 (40%), Gaps = 21/247 (8%)
Query: 204 AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARK 263
AG +V + N + +R + + L A I VGD I + +
Sbjct: 883 AGIGSFVRLYEWTNEKELRMECNIQNMIAALYLKAKGDFILVGDLMRSITLLQHKQMEGI 942
Query: 264 LEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCA-YH 322
+I D + + ++D DT + S+ G++ V C E L P A +H
Sbjct: 943 FVEIARDCEPKWMRAVEILDDDTFLGSETNGNLFV--CQKDSAATTDEERQLLPELARFH 1000
Query: 323 MGEIAVSIRKGSFIYKLPADDA--LGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYE 380
+G+ R GS + + + + C ++ T G+I I I + Y+
Sbjct: 1001 LGDTVNVFRHGSLVMQNVGERTTPINGC----------VLYGTCNGAIGIVTQIPQDFYD 1050
Query: 381 LLEAVQARLAIHPLTAPLLGNDHSEFRSRENPVGVP---KILDGDMLSQFLELTSTQ-QE 436
L ++ RL + + +H+ +R+ + V +DGD++ FL+L+ + ++
Sbjct: 1051 FLHGLEERLK--KIIKSVGKIEHTYYRNFQINTKVEPSEGFIDGDLIESFLDLSRDKMRD 1108
Query: 437 AVLSFTL 443
AVL L
Sbjct: 1109 AVLGLEL 1115
>gi|315045910|ref|XP_003172330.1| serine/threonine protein kinase [Arthroderma gypseum CBS 118893]
gi|311342716|gb|EFR01919.1| serine/threonine protein kinase [Arthroderma gypseum CBS 118893]
Length = 1397
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 96/209 (45%), Gaps = 12/209 (5%)
Query: 245 VGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAV---VSDRKGSIAVLSC 301
+GD G+ F Y E+ KL+ + V D + + V+D ++ VL
Sbjct: 1174 IGDAFKGLWFTGYSEEPYKLDLFGKENENLAVVDADFLPDGNKLYILVADDDCNLHVLQY 1233
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIR---KGSFIYKLPADDALGDCLASFESSQTT 358
D + ++S L +H G A ++ GS P D+ D S+
Sbjct: 1234 -DPEDPSSSKGDRLLHRSVFHTGHFASTMTLLPHGSHTLSSPVDEDAMDTDLPPPPSKYQ 1292
Query: 359 IIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP--VGVP 416
++ + GSI + P++ + Y L A+Q++L ++ L P G + +R+ E+ G
Sbjct: 1293 VLITFQTGSIGVISPLNEDSYRRLLALQSQL-VNALEHP-CGLNPRGYRAVESDGMGGQR 1350
Query: 417 KILDGDMLSQFLELTSTQQEAVLSFTLGS 445
++DG++L ++L++ Q++A ++ +G+
Sbjct: 1351 GMIDGNLLLRWLDM-GAQRKAEIAGRVGA 1378
>gi|402577494|gb|EJW71450.1| hypothetical protein WUBG_17643 [Wuchereria bancrofti]
Length = 85
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 242 RIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCV-LMDVDTAVVSDRKGSIAVLS 300
RI V D ++ + F Y + +L I+CD + CV L+D DT V DR G+IAV+S
Sbjct: 4 RIVVSDSQESVHFMRYKKQDGQLS-IFCDETSPRYVTCVCLLDYDTVAVGDRFGNIAVVS 62
>gi|121719617|ref|XP_001276507.1| cleavage and polyadenylation specificity factor subunit A, putative
[Aspergillus clavatus NRRL 1]
gi|148886827|sp|A1C3U1.1|CFT1_ASPCL RecName: Full=Protein cft1; AltName: Full=Cleavage factor two protein
1
gi|119404719|gb|EAW15081.1| cleavage and polyadenylation specificity factor subunit A, putative
[Aspergillus clavatus NRRL 1]
Length = 1401
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 23/220 (10%)
Query: 245 VGDCRDGILFYSYHEDARKLEQIYCD-PSQRLVADCVLMDVDT--AVVSDRKGSIAVLSC 301
VGD GI F Y E+ K+ D +VA L D D +V+D ++ VL
Sbjct: 1179 VGDAFKGIWFAGYSEEPYKMSLFGKDLEYPEVVAADFLPDGDKLFILVADSDCNLHVLQY 1238
Query: 302 S--DRLEDNASPECNLTPNCAYHMGEIAVSIR---KGSFIYKLPADDALGDCLASFESSQ 356
D + N L +HMG ++ + + Y++P+ D+ + + Q
Sbjct: 1239 EPEDPMSSNGD---KLLVRSKFHMGHFTSTLTLLPRTTASYEIPSADSDSMEVDPRITPQ 1295
Query: 357 TTIIASTLLGSIVIFIPISSEEYELLEAVQARLAI---HPLTAPLLGNDHSEFRSRENPV 413
+I S GSI I I E Y L A+Q++LA HP G + +R+ E+
Sbjct: 1296 QVLITSQS-GSIGIVTSIPEESYRRLSALQSQLANTVEHP-----CGLNPRAYRAIESDG 1349
Query: 414 GVPK-ILDGDMLSQFLELTSTQQEAVLSFTLGSFD-TIKA 451
+ +LDG++L Q+L + S Q+ ++ +G+ + IKA
Sbjct: 1350 TAGRGMLDGNLLYQWLSM-SKQRRMEIAARVGAHEWEIKA 1388
>gi|392558419|gb|EIW51607.1| hypothetical protein TRAVEDRAFT_176174 [Trametes versicolor FP-101664
SS1]
Length = 1431
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 111/274 (40%), Gaps = 29/274 (10%)
Query: 175 WQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRFAVGRTRFMIM 234
W+L+L G V +C ++ Y ++S G +V F D +R+ A +
Sbjct: 1155 WRLKLLCRDDAKGPVSFLC-GINGYLVSSMGQKIFVRAFDLD--ERLVGVAFLDVGVYVT 1211
Query: 235 LLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLV--ADCVLMDVDTAVVSDR 292
L A + +GD + F ++ ED KL + DP + AD D ++V+
Sbjct: 1212 SLRAVKNLLVIGDAVKSVWFVAFQEDPYKLVVLGKDPQLCCITRADLFFADGQLSIVTCD 1271
Query: 293 KGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASF 352
+ I L D + + +L +H G+ R + + P + GD
Sbjct: 1272 EEGIVRLYAYDPHDPESKSGQHLLRRTEFH-GQ--SEYRSSMLVARRPKN---GDP---- 1321
Query: 353 ESSQTTIIASTLLGSIVIFIPISSE--------EYELLEAVQARLAIHPLTAPLLGNDHS 404
E Q ++ ++ GS+ + + +L+ VQ A++P ++ N
Sbjct: 1322 EIPQARLVCGSVDGSLSTLTYVDEAASKRLHLLQGQLIRTVQHVAALNPKAFRMVRN--- 1378
Query: 405 EFRSRENPVGVPKILDGDMLSQFLELTSTQQEAV 438
E+ SR G ILDG++L+ F +L +Q V
Sbjct: 1379 EYVSRPLSKG---ILDGNLLATFEDLPIARQNEV 1409
>gi|226508594|ref|NP_001140370.1| uncharacterized protein LOC100272422 [Zea mays]
gi|194699204|gb|ACF83686.1| unknown [Zea mays]
Length = 173
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 28/132 (21%)
Query: 314 NLTPN-----CAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSI 368
N PN +H+G++ ++K S I P G+CL I T++GS+
Sbjct: 40 NGAPNKVEEIVQFHVGDVVTCLQKASLI---PGG---GECL----------IYGTVMGSV 83
Query: 369 VIFIPISS-EEYELLEAVQARL-AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQ 426
+ +S E+ + ++ L HP PL G DH +RS P V ++DGD+ Q
Sbjct: 84 GALLAFTSREDVDFFSHLEMHLRQEHP---PLCGRDHMAYRSAYFP--VKDVIDGDLCEQ 138
Query: 427 FLELTSTQQEAV 438
+ L + Q +
Sbjct: 139 YPSLPADMQRKI 150
>gi|308805673|ref|XP_003080148.1| cleavage and polyadenylation specificity factor (ISS) [Ostreococcus
tauri]
gi|116058608|emb|CAL54315.1| cleavage and polyadenylation specificity factor (ISS), partial
[Ostreococcus tauri]
Length = 1473
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 100/233 (42%), Gaps = 30/233 (12%)
Query: 243 IAVGDCRDGILFYSYHEDA--RKLEQIYCD-PSQRLVADCVLMDVDTAVV--SDRKGSIA 297
I VGD G+ F+ + + + L Q+ D +V+ L+D T + SD G+
Sbjct: 988 ILVGDLEKGLHFFRWKDTGFEKSLIQLSKDFERMDVVSSEFLIDGTTLSLLGSDMSGNAR 1047
Query: 298 VLSCSDRLEDNASPECNLTPNCAYHMGE-IAVSIR---KGSFIYKLPADDALGDCLASFE 353
+ ++ + L P AYH+G I+ +R +GS K+ + D F
Sbjct: 1048 TFGYDPKSIESWKGQ-KLLPRAAYHVGSPISRMVRFNVEGS-KSKMASTDGKPKGANRF- 1104
Query: 354 SSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHS-----EFRS 408
+ TL G++ IF+P YE L A+Q L + +P+ N + F
Sbjct: 1105 ----AVFFGTLDGALGIFMPTDPVTYEKLLAIQRELTT-AVRSPIGCNPRTFRTPKVFEG 1159
Query: 409 RENPVGVP-KILDGDMLSQFLELTSTQQEAVLS-------FTLGSFDTIKASS 453
+ + P +LDG +LS+F LT ++Q + S TLG + AS+
Sbjct: 1160 KHVQLRAPLDVLDGGLLSKFETLTFSEQVKIASSAQVDRDLTLGLIQQLSASN 1212
>gi|195329354|ref|XP_002031376.1| GM24084 [Drosophila sechellia]
gi|194120319|gb|EDW42362.1| GM24084 [Drosophila sechellia]
Length = 1140
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 88/232 (37%), Gaps = 16/232 (6%)
Query: 204 AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARK 263
AG +V + N + +R + + L A I VGD I + +
Sbjct: 883 AGIGSFVRLYEWTNEKELRMECNIQNMIAALYLKAKGDFILVGDLMRSITLLQHKQMEGI 942
Query: 264 LEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCA-YH 322
+I D + + ++D DT + S+ G++ V C E L P A +H
Sbjct: 943 FVEIARDCEPKWMRAVEILDDDTFLGSETNGNLFV--CQKDSAATTDEERQLLPELARFH 1000
Query: 323 MGEIAVSIRKGSFIYKLPADDA--LGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYE 380
+G+ R GS + + + + C ++ T G+I I I + Y+
Sbjct: 1001 LGDTVNVFRHGSLVMQNVGERTTPINGC----------VLYGTCNGAIGIVTQIPQDFYD 1050
Query: 381 LLEAVQARLA-IHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELT 431
L ++ RL I L + + FR +DGD++ FL+L+
Sbjct: 1051 FLHGLEERLKKIIKLVGKIGHKFYRNFRIHTQVEPSQGFIDGDLIESFLDLS 1102
>gi|408378624|ref|ZP_11176221.1| Twin-arginine translocation pathway signal sequence
domain-containing protein [Agrobacterium albertimagni
AOL15]
gi|407747761|gb|EKF59280.1| Twin-arginine translocation pathway signal sequence
domain-containing protein [Agrobacterium albertimagni
AOL15]
Length = 637
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%)
Query: 44 SDICCVDPLSGSVLSSFKLELGETGKSMELVRVGHEQVLVVGTSLSSGPAIMPSGEAEST 103
S + +DP +G L + GE MEL +G+ QV+ V + +P+ E
Sbjct: 108 SGVADIDPANGVSLEASDKVFGENTDGMELFAIGNHQVIAVNHEYVNNETNLPNNEKGMP 167
Query: 104 KGRLIVLCIEHMQ 116
KG V ++H+Q
Sbjct: 168 KGLDDVKILQHLQ 180
>gi|253744540|gb|EET00740.1| Hypothetical protein GL50581_2007 [Giardia intestinalis ATCC 50581]
Length = 1446
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 232 MIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCD-PSQRLVADCVLMDVDTAVVS 290
+I L++ TRI + G+ +SY + RKL D R+V V + D V+
Sbjct: 1243 IIRLVSLDITRIIAVMNKAGLAVFSYSQSKRKLTLELTDIVPMRIVTAIVPLSPDVIVIG 1302
Query: 291 DRKGSIAVLSC 301
DR G+I+VLSC
Sbjct: 1303 DRFGTISVLSC 1313
>gi|297740793|emb|CBI30975.3| unnamed protein product [Vitis vinifera]
Length = 1043
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 12/148 (8%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSI-AVLSC 301
I VGD I Y + +E+ D + ++ ++D D + ++ +I V
Sbjct: 881 IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNIFTVRKN 940
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIA 361
S+ D + YH+GE R GS + +LP D T+I
Sbjct: 941 SEGATDEERGRLEVVGE--YHLGEFVNRFRHGSLVMRLPDSDV---------GQIPTVIF 989
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARL 389
T+ G I + + ++Y LE +QA L
Sbjct: 990 GTVNGVIGVIASLPHDQYVFLEKLQANL 1017
>gi|325094074|gb|EGC47384.1| cleavage factor two protein 1 [Ajellomyces capsulatus H88]
Length = 1377
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 359 IIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRE-NPVGVPK 417
++ ++ GSI + P+S Y L A+Q++LA + L P G + FR+ E + +G
Sbjct: 1273 VLVTSETGSIALITPVSETSYRRLSALQSQLA-NTLEHP-CGLNPRAFRAVESDGIGGRG 1330
Query: 418 ILDGDMLSQFLELTSTQQEAVLSFTLGS 445
++DGD++ ++L+L TQ++A ++ +G+
Sbjct: 1331 MVDGDLVKRWLDL-GTQRKAEIANRVGA 1357
>gi|301616502|ref|XP_002937687.1| PREDICTED: DNA damage-binding protein 1-like [Xenopus (Silurana)
tropicalis]
Length = 1140
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 103/250 (41%), Gaps = 24/250 (9%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
M + L I VGD +L +Y E+I D + ++ ++D D + +
Sbjct: 909 IMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGA 968
Query: 291 DRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLA 350
+ ++ V D +L +H+GE GS + + LG+
Sbjct: 969 ENAFNLFVCQ-KDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ-----NLGE--- 1019
Query: 351 SFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARL-----AIHPLTAPLLGNDHSE 405
+ +Q +++ T+ G I + +S Y LL VQ RL ++ + + H+E
Sbjct: 1020 TSPPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDVQNRLNKVIKSVGKIEHSFWRSFHTE 1079
Query: 406 FRSRENPVGVPKILDGDMLSQFLELTSTQ-QEAVLSFTLGSFDTIKASSKLPPSSPIPVN 464
R E G +DGD++ FL+++ + QE + + + +K + + +
Sbjct: 1080 -RKTEPATG---FIDGDLIESFLDISRPKMQEVIANLQIDDGSGMKRETTVD-----DLI 1130
Query: 465 QVVQLLERVH 474
+VV+ L R+H
Sbjct: 1131 KVVEELTRIH 1140
>gi|147906138|ref|NP_001083624.1| DNA damage-binding protein 1 [Xenopus laevis]
gi|82186503|sp|Q6P6Z0.1|DDB1_XENLA RecName: Full=DNA damage-binding protein 1; AltName:
Full=Damage-specific DNA-binding protein 1
gi|38303806|gb|AAH61946.1| Ddb1 protein [Xenopus laevis]
Length = 1140
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 103/250 (41%), Gaps = 24/250 (9%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
M + L I VGD +L +Y E+I D + ++ ++D D + +
Sbjct: 909 IMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGA 968
Query: 291 DRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLA 350
+ ++ V D +L +H+GE GS + + LG+
Sbjct: 969 ENAFNLFVCQ-KDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ-----NLGE--- 1019
Query: 351 SFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARL-----AIHPLTAPLLGNDHSE 405
+ +Q +++ T+ G I + +S Y LL VQ RL ++ + + H+E
Sbjct: 1020 TSPPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDVQNRLNKVIKSVGKIEHSFWRSFHTE 1079
Query: 406 FRSRENPVGVPKILDGDMLSQFLELTSTQ-QEAVLSFTLGSFDTIKASSKLPPSSPIPVN 464
R E G +DGD++ FL+++ + QE + + + +K + + +
Sbjct: 1080 -RKTEPATG---FIDGDLIESFLDISRPKMQEVIANLQIDDGSGMKRETTVD-----DLI 1130
Query: 465 QVVQLLERVH 474
+VV+ L R+H
Sbjct: 1131 KVVEELTRIH 1140
>gi|328773280|gb|EGF83317.1| hypothetical protein BATDEDRAFT_21894 [Batrachochytrium dendrobatidis
JAM81]
Length = 1673
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 22/218 (10%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCD--PSQRLVADCVLMDVDTAV-VSDRKGSIAVL 299
I + D + + F ++ E+ KL + D P Q A+ ++ D A+ V+D ++ +
Sbjct: 1448 IQICDIQKSVWFVAFQEEPAKLAVLGRDVHPLQGYAANMLIDDNQLALLVADGDKNLHTM 1507
Query: 300 SCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTI 359
+ DN +L GEI + FI ++ L + F S Q
Sbjct: 1508 IYA---PDNVQ---SLGGERLIRKGEIHLGQHVSKFI-RMRRKPLLRNDAIVF-SKQYLN 1559
Query: 360 IASTLLGSIVIFIPISSEEYELLEAVQARLAI---HPLTAPLLGNDHSEFRSRE------ 410
+A+TL G++ I P+S ++ L + +R+ H G ++ R R
Sbjct: 1560 VAATLDGALEIITPVSERIFKRLYGLYSRMVTSIEHIAGLNPRGFRQAQHRVRPITLSGF 1619
Query: 411 -NPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGSFD 447
P G ILDGD+L +++ L+ TQQ L+ +GS D
Sbjct: 1620 IGPPGPRGILDGDLLYEYVRLSRTQQRG-LAKAIGSKD 1656
>gi|281208174|gb|EFA82352.1| UV-damaged DNA binding protein1 [Polysphondylium pallidum PN500]
Length = 1054
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 14/133 (10%)
Query: 321 YHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYE 380
+H+GE + GS + D TI+ T+ G+I + + IS ++YE
Sbjct: 923 FHLGETINKFKHGSLVTSPDMDSP----------KLPTILFGTVSGAIGVIVSISKDDYE 972
Query: 381 LLEAVQARL--AIHPLTAPLLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQ-EA 437
E +Q L +H + N S F + + +DGD++ FL+L + EA
Sbjct: 973 FFEKLQKGLNRVVHGVGGLPFENWRS-FSTEHMTIPSKNFIDGDLIETFLDLRHDKMLEA 1031
Query: 438 VLSFTLGSFDTIK 450
+ + DT +
Sbjct: 1032 IKDMNISIEDTYR 1044
>gi|302506529|ref|XP_003015221.1| hypothetical protein ARB_06344 [Arthroderma benhamiae CBS 112371]
gi|291178793|gb|EFE34581.1| hypothetical protein ARB_06344 [Arthroderma benhamiae CBS 112371]
Length = 1370
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 13/209 (6%)
Query: 245 VGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTA---VVSDRKGSIAVLSC 301
+GD G+ F Y E+ KL+ + V D + +V+D ++ VL
Sbjct: 1118 IGDAFKGLWFIGYSEEPYKLDLFGKENENLAVVDADFLPDGNKLYILVADDDCNLHVLQY 1177
Query: 302 SDRLEDNASPECNLTPNCAYHMGEIAVSIR---KGSFIYKLPADDALGDCLASFESSQTT 358
D + ++S L +H G A ++ G P D+ D S S+
Sbjct: 1178 -DPEDPSSSKGDRLLHRSVFHTGHFASTMTLLPHGGHTPSSPVDEDAMDT-DSPPPSKYQ 1235
Query: 359 IIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRENP--VGVP 416
I+ + GSI I P+ + Y L A+Q++L ++ L P N +R+ E+ G
Sbjct: 1236 ILMTFQTGSIAIITPLGEDSYRRLLALQSQL-VNALEHPCSLNPRG-YRAVESDGMGGQR 1293
Query: 417 KILDGDMLSQFLELTSTQQEAVLSFTLGS 445
++DG++L ++L++ Q++A ++ +G+
Sbjct: 1294 GMIDGNLLLRWLDM-GAQRKAEIAGRVGA 1321
>gi|380488197|emb|CCF37544.1| hypothetical protein CH063_08850 [Colletotrichum higginsianum]
Length = 271
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 362 STLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSE---------FRSRENP 412
+T+ GS+ +F I SE LL Q RLA T G D + FR+ +
Sbjct: 163 ATVEGSLYVFADIKSEYQSLLLQFQERLADVVKTLGQAGGDSTSGLSFMAWRGFRNAKRA 222
Query: 413 VGVP-KILDGDMLSQFLELTSTQQEAVLS 440
P + +DG+++ +FL+L +QEAV+
Sbjct: 223 ADGPFRFVDGELIERFLDLDEAKQEAVVQ 251
>gi|156406895|ref|XP_001641280.1| predicted protein [Nematostella vectensis]
gi|156228418|gb|EDO49217.1| predicted protein [Nematostella vectensis]
Length = 1171
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 62/155 (40%), Gaps = 33/155 (21%)
Query: 241 TRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVL- 299
TRI V D ++ F Y +L D + R + C +D DT +D+ G+I +
Sbjct: 968 TRIVVSDIQESFHFVKYKPRDNQLVVFADDVNPRWLTCCCYLDYDTLAGADKFGNIFTVR 1027
Query: 300 ---SCSDRLEDNAS-------------PECNLTPNCAYHMGEIAVSIRKGSFIYKLPADD 343
SD ++++ + + L C Y +GE +S++K + I
Sbjct: 1028 LPSGSSDDVDEDPTGTKAFWDRGLLNGAQQKLETMCNYFVGETVLSLQKATLI------- 1080
Query: 344 ALGDCLASFESSQTTIIASTLLGSIVIFIPISSEE 378
+++ +TL G + + +P +S E
Sbjct: 1081 ---------PGGSESLVFTTLSGGVGMLVPFTSRE 1106
>gi|410912407|ref|XP_003969681.1| PREDICTED: DNA damage-binding protein 1-like [Takifugu rubripes]
Length = 1140
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 101/249 (40%), Gaps = 22/249 (8%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
M + L I VGD +L +Y E+I D + ++ ++D D + +
Sbjct: 909 IMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGA 968
Query: 291 DRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLA 350
+ ++ V D +L +H+GE GS + + LG+
Sbjct: 969 ENAFNLFVCQ-KDSAATTDEDRQHLQEVGVFHLGEFVNVFCHGSLVLQ-----NLGE--- 1019
Query: 351 SFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARL-----AIHPLTAPLLGNDHSE 405
+ +Q +++ T+ G I + +S + LL +Q RL ++ + + H+E
Sbjct: 1020 TSTPTQGSVLFGTVTGMIGLVTSLSEGWHSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTE 1079
Query: 406 FRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQ 465
R E G +DGD++ FL+L + + V+S + S ++ V +
Sbjct: 1080 -RKTEQAKG---FIDGDLIESFLDLGRAKMQEVVS----TLQIDDGSGMKREATVDEVIK 1131
Query: 466 VVQLLERVH 474
+V+ L R+H
Sbjct: 1132 IVEELTRIH 1140
>gi|348560393|ref|XP_003465998.1| PREDICTED: DNA damage-binding protein 1-like [Cavia porcellus]
Length = 1140
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 102/249 (40%), Gaps = 22/249 (8%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
M + L I VGD +L +Y E+I D + ++ ++D D + +
Sbjct: 909 IMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGA 968
Query: 291 DRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLA 350
+ ++ V D +L +H+GE GS + + LG+
Sbjct: 969 ENAFNLFVCQ-KDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ-----NLGE--- 1019
Query: 351 SFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARL-----AIHPLTAPLLGNDHSE 405
+ +Q +++ T+ G I + +S Y LL +Q RL ++ + + H+E
Sbjct: 1020 TSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTE 1079
Query: 406 FRSRENPVGVPKILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIPVNQ 465
R E G +DGD++ FL+++ + + V++ + S ++ + +
Sbjct: 1080 -RKTEQATG---FIDGDLIESFLDISRPKMQEVVA----NLQYDDGSGMKREATADDLIK 1131
Query: 466 VVQLLERVH 474
VV+ L R+H
Sbjct: 1132 VVEELTRIH 1140
>gi|195500686|ref|XP_002097479.1| GE26244 [Drosophila yakuba]
gi|194183580|gb|EDW97191.1| GE26244 [Drosophila yakuba]
Length = 1140
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 94/234 (40%), Gaps = 20/234 (8%)
Query: 204 AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARK 263
AG +V + N + +R + + L A I VGD I + +
Sbjct: 883 AGIGSFVRLYEWTNEKELRMECNIQNMIAALYLKAKGDFILVGDLMRSITLLQHKQMEGI 942
Query: 264 LEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCA-YH 322
+I D + + ++D DT + S+ G++ V C E L P A +H
Sbjct: 943 FVEIARDCEPKWMRAVEILDDDTFLGSETNGNLFV--CQKDSAATTDEERQLLPELARFH 1000
Query: 323 MGEIAVSIRKGSFIYKLPADDA--LGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYE 380
+G+ R GS + + + + C ++ T G+I I I + Y+
Sbjct: 1001 LGDTVNVFRHGSLVMQNVGERTTPINGC----------VLYGTCNGAIGIVTQIPQDFYD 1050
Query: 381 LLEAVQARLAIHPLTAPLLGNDHSEFRSRE--NPVGVPK-ILDGDMLSQFLELT 431
L +Q RL + + +H+ +R+ + N V + +DGD++ FL+L+
Sbjct: 1051 FLHGLQERLK--KIIKSVGKIEHTYYRNFQINNKVEPSEGFIDGDLIESFLDLS 1102
>gi|188583867|ref|YP_001927312.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein
[Methylobacterium populi BJ001]
gi|179347365|gb|ACB82777.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein
[Methylobacterium populi BJ001]
Length = 455
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 8/122 (6%)
Query: 270 DPSQRLVADCVLMDVD-----TAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMG 324
D S+ + AD L V +A IAV+ +D+ + + P T A
Sbjct: 16 DASRGIPADVPLRRVSLGSLLSATARRHPERIAVVDPADKPDWSDRPAITWTYAAA---A 72
Query: 325 EIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEA 384
EI + +G ++LP +G CL S I+A G + +P+S +E LL A
Sbjct: 73 EIVERLARGLRSWRLPPGSRIGLCLPGSAESALAILAVEAAGHVACLLPVSWDEERLLAA 132
Query: 385 VQ 386
Q
Sbjct: 133 AQ 134
>gi|327278830|ref|XP_003224163.1| PREDICTED: DNA damage-binding protein 1-like [Anolis carolinensis]
Length = 1140
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 100/238 (42%), Gaps = 24/238 (10%)
Query: 243 IAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCS 302
I VGD +L +Y E+I D + ++ ++D D + ++ ++ V
Sbjct: 921 ILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQ-K 979
Query: 303 DRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIAS 362
D +L +H+GE GS + + LG+ + +Q +++
Sbjct: 980 DSAATTDEERQHLQEFGLFHLGEFVNVFCHGSLVMQ-----NLGE---TSTPTQGSVLFG 1031
Query: 363 TLLGSIVIFIPISSEEYELLEAVQARL-----AIHPLTAPLLGNDHSEFRSRENPVGVPK 417
T+ G I + +S Y LL VQ RL ++ + + H+E R E G
Sbjct: 1032 TVNGMIGLVTSLSESWYNLLLDVQNRLNKVIKSVGKIEHSFWRSFHTE-RKTEPATG--- 1087
Query: 418 ILDGDMLSQFLELTSTQ-QEAVLSFTLGSFDTIKASSKLPPSSPIPVNQVVQLLERVH 474
+DGD++ FL+++ + QE V + + +K + + + ++V+ L R+H
Sbjct: 1088 FIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVD-----DLIKIVEELTRIH 1140
>gi|449684814|ref|XP_004210722.1| PREDICTED: DNA damage-binding protein 1-like, partial [Hydra
magnipapillata]
Length = 725
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 128/315 (40%), Gaps = 36/315 (11%)
Query: 145 YATEQLSSSSLCSSPDDASCDGIKL---EETETWQLRLAYSTTWPGMVLAI-------CP 194
+AT L+S S + P+ C G + EE+E + ++ + G ++ I
Sbjct: 399 WAT-SLTSCSFSNDPNTYYCVGTSMVYPEESEPKEGKIILFQLFEGKLVQIGSKTVNGAV 457
Query: 195 YLDRYFLAS--AGNAFYVCGFPNDNPQRVRRFAVGRTRFMIMLLTAHFTRIAVGDCRDGI 252
Y+ + F AG V + + + +++ + + L + I VGD +
Sbjct: 458 YVLQGFNGKLLAGVNSLVSVYEWTSDKELKQECCYHNTILALYLKSKGDFILVGDLMRSM 517
Query: 253 LFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPE 312
+Y R LE+I D S + ++D DT + ++ ++ + D N
Sbjct: 518 TLLAYKPLGR-LEEIAHDFSPNWMTAVEIIDDDTFLGAENSFNLFICQ-KDNSSVNDEER 575
Query: 313 CNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFI 372
+L YH+G+ + GS + + L SS I+ T+ G+I +
Sbjct: 576 HHLQTIGKYHLGDFVNVFKHGSLVMHHSTEQ-----LTPISSS---ILYGTVRGAIGLVA 627
Query: 373 PISSEEYELLEAVQARLAIHPLTAPLLGN-DHSEFRSREN------PVGVPKILDGDMLS 425
+ ++ L VQ +L+ T +G +H +RS N VG +DGD++
Sbjct: 628 GLPKNTFDFLSQVQEKLS---KTIKSVGKIEHEFWRSFYNDKKTDLAVGC---VDGDLIE 681
Query: 426 QFLELTSTQQEAVLS 440
L+LT TQ V+S
Sbjct: 682 SCLDLTRTQLHEVVS 696
>gi|255956643|ref|XP_002569074.1| Pc21g20880 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590785|emb|CAP96985.1| Pc21g20880 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1140
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 285 DTAVVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDA 344
+T + SD +G++ VLS + A + L P +GE+ IR +P
Sbjct: 975 ETFLQSDAEGNLIVLS-RNMNGVTAQDKHRLMPTSEISLGEMVNRIRP----VNIPQ--- 1026
Query: 345 LGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDH- 403
L+S + +A T+ GSI +F I+ E + L +QA L+ + L D
Sbjct: 1027 ----LSSVMVTPRAFMA-TVEGSIFLFAVINPEHQDFLMTLQASLSTKINSLGNLSFDKF 1081
Query: 404 SEFRSRENPVGVP-KILDGDMLSQFLELTSTQQEAVLSFTLGSFDTIKASSKLPPSSPIP 462
FR+ P + +DG+++ QFL + + QE ++ +GS D ++
Sbjct: 1082 RSFRTMVRSAEAPYRFVDGELIEQFLNCSPSMQEEIVQ-EIGSSDVVE------------ 1128
Query: 463 VNQVVQLLERVH 474
V ++++ L R+H
Sbjct: 1129 VKRMIEALRRLH 1140
>gi|151946117|gb|EDN64348.1| pre-spliceosome component [Saccharomyces cerevisiae YJM789]
Length = 1361
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 398 LLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQE 436
+LG DH E+RS PV K++DGD+ FL L+ +QE
Sbjct: 1299 ILGRDHQEYRSYYAPVR--KVIDGDLCENFLRLSLNEQE 1335
>gi|207342522|gb|EDZ70265.1| YML049Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1267
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 398 LLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQE 436
+LG DH E+RS PV K++DGD+ FL L+ +QE
Sbjct: 1205 ILGRDHQEYRSYYAPVR--KVIDGDLCENFLRLSLNEQE 1241
>gi|392297537|gb|EIW08637.1| Rse1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1332
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 398 LLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQE 436
+LG DH E+RS PV K++DGD+ FL L+ +QE
Sbjct: 1270 ILGRDHQEYRSYYAPVR--KVIDGDLCENFLRLSLNEQE 1306
>gi|365763701|gb|EHN05227.1| Rse1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1361
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 398 LLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQE 436
+LG DH E+RS PV K++DGD+ FL L+ +QE
Sbjct: 1299 ILGRDHQEYRSYYAPVR--KVIDGDLCENFLRLSLNEQE 1335
>gi|259148530|emb|CAY81775.1| Rse1p [Saccharomyces cerevisiae EC1118]
Length = 1361
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 398 LLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQE 436
+LG DH E+RS PV K++DGD+ FL L+ +QE
Sbjct: 1299 ILGRDHQEYRSYYAPVR--KVIDGDLCENFLRLSLNEQE 1335
>gi|6323592|ref|NP_013663.1| Rse1p [Saccharomyces cerevisiae S288c]
gi|2497090|sp|Q04693.1|RSE1_YEAST RecName: Full=Pre-mRNA-splicing factor RSE1; AltName: Full=RNA
splicing and ER to Golgi transport factor 1; AltName:
Full=Spliceosome-associated protein 130
gi|642306|emb|CAA87825.1| unknown [Saccharomyces cerevisiae]
gi|190408196|gb|EDV11461.1| pre-mRNA splicing factor RSE1 [Saccharomyces cerevisiae RM11-1a]
gi|256271284|gb|EEU06357.1| Rse1p [Saccharomyces cerevisiae JAY291]
gi|285813955|tpg|DAA09850.1| TPA: Rse1p [Saccharomyces cerevisiae S288c]
Length = 1361
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 398 LLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQE 436
+LG DH E+RS PV K++DGD+ FL L+ +QE
Sbjct: 1299 ILGRDHQEYRSYYAPVR--KVIDGDLCENFLRLSLNEQE 1335
>gi|323336187|gb|EGA77458.1| Rse1p [Saccharomyces cerevisiae Vin13]
Length = 1332
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 398 LLGNDHSEFRSRENPVGVPKILDGDMLSQFLELTSTQQE 436
+LG DH E+RS PV K++DGD+ FL L+ +QE
Sbjct: 1270 ILGRDHQEYRSYYAPVR--KVIDGDLCENFLRLSLNEQE 1306
>gi|429850956|gb|ELA26181.1| DNA damage-binding protein 1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1409
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 35/193 (18%)
Query: 259 EDARKLEQIYCDPSQRLVADCVLMDVDTAVVSDRKGSIAVLSCSDRLEDNASPECN---L 315
E AR + I+ A C L + D + +D +G++ VL R NA E + +
Sbjct: 951 ERARHFQYIWA------TAVCHL-EQDLWIEADAQGNLMVL----RRNPNAPTEHDKKQM 999
Query: 316 TPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESSQTTIIASTLLGSIVIFIPIS 375
+H+GE IR P D G+ + + +T+ GSI +F I
Sbjct: 1000 EVISEFHLGEQINKIR--------PLDVVSGEN----DPIEPKAFLATIEGSIYVFADIK 1047
Query: 376 SEEYELLEAVQARLA-----IHPLTAPLLGNDHSEFRSRENPV----GVPKILDGDMLSQ 426
E LL Q RLA + P G +R N G + +DG+++ +
Sbjct: 1048 PEYQSLLLQFQERLAGVIKTLGQADEPGAGLSFMSWRGFRNAKRSADGPFRFVDGELIER 1107
Query: 427 FLELTSTQQEAVL 439
FL+L + +QEAV+
Sbjct: 1108 FLDLDAGRQEAVV 1120
>gi|254563495|ref|YP_003070590.1| hypothetical protein METDI5165 [Methylobacterium extorquens DM4]
gi|254270773|emb|CAX26778.1| hypothetical protein METDI5165 [Methylobacterium extorquens DM4]
Length = 434
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 296 IAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESS 355
IAV+ +D+ + + P T A EI + +G ++LP +G CL S
Sbjct: 30 IAVVDPADKPDWSDRPAITWTYAAA---AEIVERLARGLRSWRLPPGSRIGLCLPGSAES 86
Query: 356 QTTIIASTLLGSIVIFIPISSEEYELLEAVQ 386
I+A G + +P+S +E LL A Q
Sbjct: 87 ALAILAVEAAGHVACLLPVSWDEDRLLAAAQ 117
>gi|226290902|gb|EEH46330.1| cleavage and polyadenylation specificity factor subunit A
[Paracoccidioides brasiliensis Pb18]
Length = 1343
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 359 IIASTLLGSIVIFIPISSEEYELLEAVQARLAIHPLTAPLLGNDHSEFRSRE-NPVGVPK 417
++ ++ GSI + P+S Y L A+Q+++ I+ L P G + FR+ E + +G
Sbjct: 1239 VLVTSETGSIALITPVSEMAYRRLSALQSQM-INTLEHP-CGLNPRAFRAVESDGIGGRG 1296
Query: 418 ILDGDMLSQFLELTSTQQEAVLSFTLGS 445
++DGD++ ++L+L TQ++A ++ +G+
Sbjct: 1297 MVDGDLVQKWLDL-GTQRKAEIASRVGA 1323
>gi|240140984|ref|YP_002965464.1| hypothetical protein MexAM1_META1p4557 [Methylobacterium extorquens
AM1]
gi|240010961|gb|ACS42187.1| hypothetical protein MexAM1_META1p4557 [Methylobacterium extorquens
AM1]
Length = 446
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 296 IAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESS 355
IAV+ +D+ + + P T A EI + +G ++LP +G CL S
Sbjct: 42 IAVVDPADKPDWSDRPAITWTYAAA---AEIVERLARGLRSWRLPPGSRIGLCLPGSAES 98
Query: 356 QTTIIASTLLGSIVIFIPISSEEYELLEAVQ 386
I+A G + +P+S +E LL A Q
Sbjct: 99 ALAILAVEAAGHVACLLPVSWDEDRLLAAAQ 129
>gi|345328202|ref|XP_003431248.1| PREDICTED: DNA damage-binding protein 1-like [Ornithorhynchus
anatinus]
Length = 1045
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 103/250 (41%), Gaps = 24/250 (9%)
Query: 231 FMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDPSQRLVADCVLMDVDTAVVS 290
M + L I VGD +L +Y E+I D + ++ ++D D + +
Sbjct: 814 IMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGA 873
Query: 291 DRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLA 350
+ ++ V D +L +H+GE GS + + LG+
Sbjct: 874 ENAFNLFVCQ-KDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ-----NLGE--- 924
Query: 351 SFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARL-----AIHPLTAPLLGNDHSE 405
+ +Q +++ T+ G I + +S Y LL +Q RL ++ + + H+E
Sbjct: 925 TSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTE 984
Query: 406 FRSRENPVGVPKILDGDMLSQFLELTSTQ-QEAVLSFTLGSFDTIKASSKLPPSSPIPVN 464
R E G +DGD++ FL+++ + QE V + + +K + + +
Sbjct: 985 -RKTEPATG---FIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVD-----DLI 1035
Query: 465 QVVQLLERVH 474
++V+ L R+H
Sbjct: 1036 KIVEELTRIH 1045
>gi|418059198|ref|ZP_12697153.1| AMP-dependent synthetase and ligase [Methylobacterium extorquens
DSM 13060]
gi|373567239|gb|EHP93213.1| AMP-dependent synthetase and ligase [Methylobacterium extorquens
DSM 13060]
Length = 466
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 296 IAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESS 355
IAV+ +D+ + + P T A EI + +G ++LP +G CL S
Sbjct: 62 IAVVDPADKPDWSDRPAITWTYAAA---AEIVERLARGLRSWRLPPGSRIGLCLPGSAES 118
Query: 356 QTTIIASTLLGSIVIFIPISSEEYELLEAVQ 386
I+A G + +P+S +E LL A Q
Sbjct: 119 ALAILAVEAAGHVACLLPVSWDEDRLLAAAQ 149
>gi|218532425|ref|YP_002423241.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein
[Methylobacterium extorquens CM4]
gi|218524728|gb|ACK85313.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein
[Methylobacterium extorquens CM4]
Length = 466
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 296 IAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESS 355
IAV+ +D+ + + P T A EI + +G ++LP +G CL S
Sbjct: 62 IAVVDPADKPDWSDRPAITWTYAAA---AEIVERLARGLRSWRLPPGSRIGLCLPGSAES 118
Query: 356 QTTIIASTLLGSIVIFIPISSEEYELLEAVQ 386
I+A G + +P+S +E LL A Q
Sbjct: 119 ALAILAVEAAGHVACLLPVSWDEDRLLAAAQ 149
>gi|339253000|ref|XP_003371723.1| cleavage and polyadenylation specificity factor subunit 1
[Trichinella spiralis]
gi|316967988|gb|EFV52332.1| cleavage and polyadenylation specificity factor subunit 1
[Trichinella spiralis]
Length = 1376
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 113/279 (40%), Gaps = 32/279 (11%)
Query: 175 WQLRLAYSTTWPGMVLAICPYLDRYFLASAGNAFYVCGFPNDN-------PQRVRRFAVG 227
++L++ YS G V ++C L Y L G Y+ + ++ +V +
Sbjct: 1092 FKLKVVYSKEQKGPVTSLCS-LRGYLLTGMGQKVYIWQYKDNALVGISFLDLQVYVHQMA 1150
Query: 228 RTRFMIMLLTAHFTRIAVGDCRDGILFYSYHEDARKLEQIYCDP--SQRLVADCVLMDVD 285
R++ + A F G+ Y E+ + L + DP + L + ++ D
Sbjct: 1151 SIRYLALTADAFF----------GVSLLRYQEEYKALSLVSRDPRPDEVLAVEFLVDRTD 1200
Query: 286 TA-VVSDRKGSIAVLSCSDRLEDNASPECNLTPNCAYHMG-EIAVSIRKGSFIYKLPADD 343
+ +++ G I D+ + L P YH G ++ +R + A +
Sbjct: 1201 LSFLMTSAAGDILTYVYLPESLDSFGGQ-RLVPQADYHFGSQVNAFVRM-----RCHAQE 1254
Query: 344 ALGDCLASFESSQTTIIASTLLGSIVIFIPISSEEYELLEAVQARLA-IHPLTAPLLGND 402
G Q I AS+ GS+ +P+ EY LL +Q+ L + P A L +D
Sbjct: 1255 IAGRKRQEVLQRQGLIFASSD-GSVNYLLPLPEREYRLLGMLQSLLIDMLPSFAGLNVDD 1313
Query: 403 HSEFRSRENPVGVP--KILDGDMLSQFLELTSTQQEAVL 439
+ R + + P I+DG++ +L + + QQE ++
Sbjct: 1314 YRTVRFPNSCLREPTKNIIDGNICMLYLYIDALQQEDIV 1352
>gi|163853565|ref|YP_001641608.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein
[Methylobacterium extorquens PA1]
gi|163665170|gb|ABY32537.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein
[Methylobacterium extorquens PA1]
Length = 466
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 296 IAVLSCSDRLEDNASPECNLTPNCAYHMGEIAVSIRKGSFIYKLPADDALGDCLASFESS 355
IAV+ +D+ + + P T A EI + +G ++LP +G CL S
Sbjct: 62 IAVVDPADKPDWSDRPAITWTYAAA---AEIVERLARGLRSWRLPPGSRIGLCLPGSAES 118
Query: 356 QTTIIASTLLGSIVIFIPISSEEYELLEAVQ 386
I+A G + +P+S +E LL A Q
Sbjct: 119 ALAILAVEAAGHVACLLPVSWDEDRLLAAAQ 149
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,056,936,167
Number of Sequences: 23463169
Number of extensions: 277541357
Number of successful extensions: 628917
Number of sequences better than 100.0: 523
Number of HSP's better than 100.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 458
Number of HSP's that attempted gapping in prelim test: 627945
Number of HSP's gapped (non-prelim): 804
length of query: 478
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 332
effective length of database: 8,933,572,693
effective search space: 2965946134076
effective search space used: 2965946134076
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)