Query 011738
Match_columns 478
No_of_seqs 211 out of 1464
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 04:41:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011738.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011738hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 1E-114 3E-119 880.6 40.3 419 45-476 26-453 (454)
2 PLN02209 serine carboxypeptida 100.0 1E-100 3E-105 787.0 44.3 405 45-473 21-437 (437)
3 PLN03016 sinapoylglucose-malat 100.0 2E-100 3E-105 786.6 42.8 402 45-473 19-433 (433)
4 PF00450 Peptidase_S10: Serine 100.0 5E-100 1E-104 790.2 34.1 402 53-470 1-415 (415)
5 PTZ00472 serine carboxypeptida 100.0 2.1E-94 4.6E-99 750.0 41.1 384 59-474 44-462 (462)
6 PLN02213 sinapoylglucose-malat 100.0 8.9E-74 1.9E-78 571.1 33.2 312 136-473 1-319 (319)
7 COG2939 Carboxypeptidase C (ca 100.0 1.1E-67 2.3E-72 530.6 25.3 384 58-473 72-493 (498)
8 KOG1283 Serine carboxypeptidas 100.0 1.2E-67 2.6E-72 495.8 16.8 394 62-469 3-412 (414)
9 TIGR01250 pro_imino_pep_2 prol 99.5 6.3E-12 1.4E-16 121.9 20.7 130 64-234 4-133 (288)
10 PRK00870 haloalkane dehalogena 99.5 1E-11 2.2E-16 123.3 21.9 141 45-231 7-149 (302)
11 TIGR03611 RutD pyrimidine util 99.4 2.5E-12 5.4E-17 122.9 15.0 116 78-234 2-117 (257)
12 PLN02824 hydrolase, alpha/beta 99.4 1.3E-11 2.9E-16 122.0 17.8 123 66-232 12-137 (294)
13 TIGR03056 bchO_mg_che_rel puta 99.4 3.6E-11 7.8E-16 116.9 18.5 109 87-234 24-132 (278)
14 PRK10673 acyl-CoA esterase; Pr 99.4 1.4E-11 3E-16 118.6 15.4 104 86-230 11-114 (255)
15 PRK03204 haloalkane dehalogena 99.4 2.7E-11 5.9E-16 119.6 17.1 123 62-232 14-136 (286)
16 TIGR03343 biphenyl_bphD 2-hydr 99.3 2.3E-10 5E-15 112.0 20.0 61 385-469 221-281 (282)
17 PHA02857 monoglyceride lipase; 99.3 1.3E-10 2.8E-15 113.7 17.2 125 73-234 9-134 (276)
18 PF12697 Abhydrolase_6: Alpha/ 99.3 4.1E-11 8.9E-16 111.4 11.8 104 94-235 1-104 (228)
19 TIGR02427 protocat_pcaD 3-oxoa 99.2 3.6E-10 7.8E-15 106.9 17.2 103 89-231 11-113 (251)
20 PLN02679 hydrolase, alpha/beta 99.2 4E-10 8.6E-15 115.0 18.3 127 64-232 63-191 (360)
21 PRK03592 haloalkane dehalogena 99.2 4.5E-10 9.8E-15 111.1 18.1 115 74-234 16-130 (295)
22 PLN03084 alpha/beta hydrolase 99.2 4.4E-10 9.6E-15 115.1 18.4 133 59-233 101-233 (383)
23 KOG4409 Predicted hydrolase/ac 99.2 7.3E-10 1.6E-14 108.2 17.9 137 59-235 62-198 (365)
24 TIGR02240 PHA_depoly_arom poly 99.2 2.6E-10 5.5E-15 111.8 14.5 117 74-233 11-127 (276)
25 PLN02385 hydrolase; alpha/beta 99.2 5E-10 1.1E-14 113.8 15.9 128 73-233 70-198 (349)
26 PLN02298 hydrolase, alpha/beta 99.2 6.4E-10 1.4E-14 112.0 15.5 140 61-234 31-171 (330)
27 PRK10349 carboxylesterase BioH 99.1 1.4E-09 3E-14 105.1 15.6 61 385-469 194-254 (256)
28 TIGR01249 pro_imino_pep_1 prol 99.1 3.2E-09 6.9E-14 105.8 18.6 126 64-234 6-132 (306)
29 TIGR01738 bioH putative pimelo 99.1 1.5E-09 3.3E-14 102.3 15.4 60 385-468 186-245 (245)
30 PRK11126 2-succinyl-6-hydroxy- 99.1 1.6E-09 3.4E-14 103.6 15.5 100 91-231 2-101 (242)
31 PLN02578 hydrolase 99.1 3E-09 6.4E-14 108.3 16.5 112 74-231 75-186 (354)
32 PRK14875 acetoin dehydrogenase 99.1 6.3E-09 1.4E-13 106.1 18.9 113 75-231 119-231 (371)
33 PLN03087 BODYGUARD 1 domain co 99.1 1.6E-08 3.5E-13 106.1 21.3 133 61-231 175-308 (481)
34 PLN02894 hydrolase, alpha/beta 99.0 9.2E-09 2E-13 106.5 18.2 109 89-232 103-211 (402)
35 PRK08775 homoserine O-acetyltr 99.0 7.5E-09 1.6E-13 104.9 17.1 62 387-471 277-339 (343)
36 PRK06489 hypothetical protein; 99.0 4E-08 8.6E-13 100.3 21.7 140 60-231 39-188 (360)
37 PLN02652 hydrolase; alpha/beta 99.0 7.2E-09 1.6E-13 106.8 16.0 129 73-234 119-247 (395)
38 PLN02965 Probable pheophorbida 99.0 1.3E-08 2.9E-13 98.4 16.3 101 94-232 6-107 (255)
39 TIGR03695 menH_SHCHC 2-succiny 99.0 3.9E-09 8.5E-14 99.5 11.7 105 91-232 1-105 (251)
40 KOG4178 Soluble epoxide hydrol 99.0 2.3E-08 5.1E-13 97.4 16.9 116 61-212 21-137 (322)
41 PRK10749 lysophospholipase L2; 99.0 2.3E-08 4.9E-13 100.9 16.8 125 74-233 40-167 (330)
42 PRK07581 hypothetical protein; 98.9 8.4E-08 1.8E-12 96.9 19.3 60 386-469 274-334 (339)
43 PLN02980 2-oxoglutarate decarb 98.8 4.6E-08 9.9E-13 117.0 16.2 108 88-231 1368-1479(1655)
44 PRK00175 metX homoserine O-ace 98.8 5.8E-07 1.3E-11 92.4 19.5 66 386-471 308-374 (379)
45 PLN02511 hydrolase 98.7 8E-08 1.7E-12 99.1 10.8 137 64-234 73-212 (388)
46 PLN02211 methyl indole-3-aceta 98.7 1.3E-06 2.9E-11 85.6 17.7 107 89-232 16-122 (273)
47 TIGR01607 PST-A Plasmodium sub 98.7 3.6E-06 7.7E-11 85.0 21.1 152 73-233 6-186 (332)
48 PRK05855 short chain dehydroge 98.6 9E-07 1.9E-11 95.7 16.3 101 74-206 12-112 (582)
49 TIGR01392 homoserO_Ac_trn homo 98.6 2.9E-06 6.2E-11 86.3 18.9 65 385-469 286-351 (351)
50 KOG1454 Predicted hydrolase/ac 98.6 1.2E-06 2.7E-11 87.9 14.9 60 387-470 264-323 (326)
51 COG2267 PldB Lysophospholipase 98.5 1.6E-06 3.4E-11 86.1 14.4 135 64-235 11-145 (298)
52 PRK10985 putative hydrolase; P 98.5 3.7E-06 8E-11 84.6 15.0 129 74-234 41-170 (324)
53 COG1506 DAP2 Dipeptidyl aminop 98.4 2.6E-06 5.7E-11 93.1 14.1 130 73-234 374-509 (620)
54 PF00561 Abhydrolase_1: alpha/ 98.4 3.4E-07 7.4E-12 85.9 5.9 57 385-465 173-229 (230)
55 TIGR03100 hydr1_PEP hydrolase, 98.4 1.4E-05 3E-10 78.4 17.2 79 137-234 58-136 (274)
56 PRK05077 frsA fermentation/res 98.4 1.5E-05 3.2E-10 82.9 18.1 120 76-233 180-301 (414)
57 PLN02872 triacylglycerol lipas 98.3 9.3E-06 2E-10 83.6 13.8 61 387-470 325-388 (395)
58 PRK10566 esterase; Provisional 98.2 4.3E-05 9.3E-10 73.4 15.5 62 387-470 186-247 (249)
59 COG0596 MhpC Predicted hydrola 98.2 8.2E-05 1.8E-09 69.5 16.1 105 91-234 21-125 (282)
60 PRK06765 homoserine O-acetyltr 98.1 0.00042 9.1E-09 71.4 22.0 67 385-471 321-388 (389)
61 PF10340 DUF2424: Protein of u 98.0 1.3E-05 2.7E-10 80.8 7.6 132 76-235 105-238 (374)
62 TIGR03101 hydr2_PEP hydrolase, 97.9 8.8E-05 1.9E-09 72.3 10.4 129 74-240 9-142 (266)
63 PF00326 Peptidase_S9: Prolyl 97.8 0.00015 3.3E-09 68.0 11.3 91 135-236 13-103 (213)
64 KOG2564 Predicted acetyltransf 97.7 6.1E-05 1.3E-09 71.8 5.8 108 89-229 72-179 (343)
65 TIGR01840 esterase_phb esteras 97.5 0.00024 5.3E-09 66.7 7.7 118 88-232 10-130 (212)
66 TIGR02821 fghA_ester_D S-formy 97.3 0.0024 5.2E-08 62.6 12.1 41 185-234 135-175 (275)
67 KOG1455 Lysophospholipase [Lip 97.3 0.0019 4.2E-08 62.7 10.8 128 74-232 37-164 (313)
68 KOG2382 Predicted alpha/beta h 97.3 0.0095 2.1E-07 58.7 15.0 89 85-199 46-134 (315)
69 TIGR01838 PHA_synth_I poly(R)- 97.2 0.026 5.7E-07 60.3 18.9 84 137-235 221-305 (532)
70 cd00707 Pancreat_lipase_like P 97.1 0.00053 1.1E-08 67.3 5.0 113 88-231 33-146 (275)
71 TIGR01836 PHA_synth_III_C poly 97.1 0.017 3.7E-07 58.7 15.5 63 385-470 284-349 (350)
72 TIGR03230 lipo_lipase lipoprot 97.1 0.0014 3E-08 68.2 7.4 81 136-231 73-153 (442)
73 KOG4391 Predicted alpha/beta h 97.0 0.0044 9.5E-08 57.2 9.0 122 75-234 65-186 (300)
74 PLN02442 S-formylglutathione h 97.0 0.0026 5.6E-08 62.7 8.3 57 167-235 125-181 (283)
75 TIGR00976 /NonD putative hydro 96.7 0.004 8.7E-08 67.3 7.9 129 74-235 6-135 (550)
76 KOG1515 Arylacetamide deacetyl 96.7 0.013 2.9E-07 58.8 10.6 137 73-235 70-210 (336)
77 PLN00021 chlorophyllase 96.4 0.0062 1.4E-07 60.9 6.6 116 88-234 49-168 (313)
78 PRK13604 luxD acyl transferase 96.4 0.07 1.5E-06 52.9 13.4 48 386-455 201-248 (307)
79 PF08386 Abhydrolase_4: TAP-li 96.4 0.014 3E-07 48.3 7.3 65 387-475 34-98 (103)
80 COG3208 GrsT Predicted thioest 96.4 0.021 4.5E-07 54.0 9.1 81 136-234 33-113 (244)
81 PF00975 Thioesterase: Thioest 96.3 0.017 3.8E-07 54.4 8.3 101 93-231 2-103 (229)
82 PF07519 Tannase: Tannase and 96.3 0.34 7.4E-06 51.3 18.6 87 376-475 342-431 (474)
83 COG3509 LpqC Poly(3-hydroxybut 96.0 0.068 1.5E-06 52.0 11.0 125 74-232 44-179 (312)
84 PRK10115 protease 2; Provision 95.9 0.015 3.1E-07 64.6 6.7 140 68-236 420-563 (686)
85 PF12695 Abhydrolase_5: Alpha/ 95.9 0.011 2.3E-07 51.2 4.5 94 93-231 1-94 (145)
86 PRK10162 acetyl esterase; Prov 95.9 0.022 4.8E-07 57.1 7.3 62 169-234 136-197 (318)
87 PF03096 Ndr: Ndr family; Int 95.9 0.074 1.6E-06 51.9 10.5 93 133-246 52-144 (283)
88 PRK05371 x-prolyl-dipeptidyl a 95.8 0.095 2.1E-06 58.8 12.6 85 134-234 277-375 (767)
89 PRK11071 esterase YqiA; Provis 95.7 0.013 2.8E-07 54.1 4.3 54 387-469 136-189 (190)
90 PF06500 DUF1100: Alpha/beta h 95.6 0.0056 1.2E-07 62.6 1.8 83 135-235 217-299 (411)
91 PF10230 DUF2305: Uncharacteri 95.5 0.054 1.2E-06 52.9 8.4 119 91-234 2-124 (266)
92 PRK11460 putative hydrolase; P 94.8 0.12 2.5E-06 49.4 8.1 38 170-208 86-123 (232)
93 KOG2100 Dipeptidyl aminopeptid 94.5 0.054 1.2E-06 60.6 5.5 146 62-235 498-647 (755)
94 PF10503 Esterase_phd: Esteras 94.3 0.12 2.6E-06 48.9 6.7 40 184-232 93-132 (220)
95 cd00312 Esterase_lipase Estera 94.2 0.12 2.6E-06 55.0 7.2 58 168-233 157-214 (493)
96 KOG1838 Alpha/beta hydrolase [ 94.0 0.25 5.5E-06 50.5 8.7 132 64-231 95-235 (409)
97 COG0657 Aes Esterase/lipase [L 93.5 0.2 4.3E-06 49.9 7.0 45 187-236 151-195 (312)
98 PF02230 Abhydrolase_2: Phosph 93.2 0.061 1.3E-06 50.5 2.7 59 387-469 155-213 (216)
99 KOG2931 Differentiation-relate 92.4 6.2 0.00013 38.7 14.9 94 133-247 75-168 (326)
100 COG4099 Predicted peptidase [G 92.4 0.96 2.1E-05 44.2 9.4 54 171-233 252-305 (387)
101 PRK10252 entF enterobactin syn 92.0 0.67 1.4E-05 55.4 9.9 103 91-231 1068-1170(1296)
102 TIGR03502 lipase_Pla1_cef extr 91.6 0.52 1.1E-05 52.6 7.7 100 90-208 448-575 (792)
103 PLN02454 triacylglycerol lipas 91.3 0.57 1.2E-05 48.2 7.0 70 163-234 204-273 (414)
104 PF05728 UPF0227: Uncharacteri 91.2 0.46 1E-05 43.7 5.8 42 185-238 56-97 (187)
105 PF01764 Lipase_3: Lipase (cla 90.9 0.52 1.1E-05 40.6 5.6 63 166-233 45-107 (140)
106 PF07859 Abhydrolase_3: alpha/ 90.9 0.45 9.8E-06 44.0 5.6 64 165-234 46-112 (211)
107 PRK10439 enterobactin/ferric e 90.8 0.76 1.7E-05 47.8 7.7 36 188-232 288-323 (411)
108 PLN02733 phosphatidylcholine-s 90.7 0.63 1.4E-05 48.7 6.9 57 142-208 126-182 (440)
109 PF05990 DUF900: Alpha/beta hy 90.4 0.41 8.8E-06 45.7 4.9 69 165-236 73-141 (233)
110 PRK11460 putative hydrolase; P 90.4 0.41 8.8E-06 45.6 4.9 62 387-468 148-209 (232)
111 COG0400 Predicted esterase [Ge 90.2 0.95 2.1E-05 42.4 6.9 62 163-234 75-136 (207)
112 KOG1552 Predicted alpha/beta h 89.9 0.84 1.8E-05 43.7 6.4 107 89-234 58-165 (258)
113 PF02129 Peptidase_S15: X-Pro 89.6 0.4 8.6E-06 46.8 4.1 83 137-236 58-140 (272)
114 PF06342 DUF1057: Alpha/beta h 89.5 2.7 5.8E-05 41.0 9.5 104 89-231 33-136 (297)
115 smart00824 PKS_TE Thioesterase 89.5 1.5 3.2E-05 39.9 7.7 77 135-230 24-100 (212)
116 cd00741 Lipase Lipase. Lipase 88.8 1.2 2.7E-05 39.1 6.5 61 165-232 8-68 (153)
117 COG1647 Esterase/lipase [Gener 88.5 11 0.00023 35.6 12.3 61 387-469 181-242 (243)
118 cd00519 Lipase_3 Lipase (class 88.5 1.1 2.3E-05 42.5 6.1 62 166-234 109-170 (229)
119 PF12695 Abhydrolase_5: Alpha/ 88.3 1 2.2E-05 38.6 5.4 47 382-451 99-145 (145)
120 KOG2281 Dipeptidyl aminopeptid 88.0 0.68 1.5E-05 49.6 4.7 115 89-237 640-767 (867)
121 PF11144 DUF2920: Protein of u 87.8 1.1 2.4E-05 45.9 5.9 61 166-235 161-222 (403)
122 KOG3975 Uncharacterized conser 87.7 1.4 3.1E-05 41.9 6.2 99 88-206 26-128 (301)
123 PF06057 VirJ: Bacterial virul 87.0 1 2.3E-05 41.3 4.8 64 163-234 46-109 (192)
124 PF05577 Peptidase_S28: Serine 86.5 1.7 3.6E-05 45.5 6.8 98 135-242 58-158 (434)
125 PF05677 DUF818: Chlamydia CHL 86.4 1.8 4E-05 43.2 6.4 61 135-203 170-230 (365)
126 PF12146 Hydrolase_4: Putative 85.9 3 6.5E-05 32.5 6.3 78 75-176 2-79 (79)
127 PLN02571 triacylglycerol lipas 85.8 2.5 5.3E-05 43.7 7.2 69 165-234 204-277 (413)
128 PF03583 LIP: Secretory lipase 85.7 1.4 2.9E-05 43.6 5.3 67 387-474 219-288 (290)
129 PF11288 DUF3089: Protein of u 85.6 1.1 2.4E-05 41.8 4.3 44 166-211 75-118 (207)
130 COG3319 Thioesterase domains o 85.2 6.2 0.00014 38.2 9.4 77 138-233 28-104 (257)
131 PF07819 PGAP1: PGAP1-like pro 85.2 4.4 9.5E-05 38.4 8.3 122 90-235 3-127 (225)
132 PF02230 Abhydrolase_2: Phosph 84.4 0.89 1.9E-05 42.6 3.2 57 167-234 86-142 (216)
133 KOG4627 Kynurenine formamidase 84.3 0.67 1.5E-05 42.8 2.2 73 147-234 102-174 (270)
134 PF00151 Lipase: Lipase; Inte 83.0 0.32 6.9E-06 49.0 -0.5 105 88-211 68-173 (331)
135 KOG4667 Predicted esterase [Li 82.3 26 0.00056 33.0 11.5 82 139-233 65-146 (269)
136 COG0400 Predicted esterase [Ge 81.6 2 4.3E-05 40.2 4.3 60 386-470 145-204 (207)
137 PRK04940 hypothetical protein; 81.5 3.1 6.7E-05 38.0 5.3 60 163-237 38-97 (180)
138 COG2272 PnbA Carboxylesterase 80.9 7.9 0.00017 40.6 8.7 35 171-206 164-198 (491)
139 KOG2984 Predicted hydrolase [G 79.1 2.3 5E-05 39.3 3.7 106 74-212 30-138 (277)
140 PLN02753 triacylglycerol lipas 78.0 6.7 0.00015 41.6 7.2 72 163-234 285-361 (531)
141 PF00756 Esterase: Putative es 76.4 4.9 0.00011 38.2 5.4 56 167-235 98-153 (251)
142 PLN02719 triacylglycerol lipas 76.3 7.6 0.00016 41.1 7.0 70 165-234 273-347 (518)
143 COG0627 Predicted esterase [Ge 75.5 9.9 0.00021 38.0 7.4 131 89-235 51-190 (316)
144 PLN02324 triacylglycerol lipas 75.4 9 0.0002 39.6 7.1 70 164-234 192-267 (415)
145 KOG2565 Predicted hydrolases o 75.2 19 0.00042 36.5 9.1 133 74-237 133-269 (469)
146 PRK14566 triosephosphate isome 74.9 7.7 0.00017 37.6 6.2 61 165-235 188-248 (260)
147 COG2945 Predicted hydrolase of 74.8 3.9 8.5E-05 37.6 3.9 65 138-211 62-126 (210)
148 PLN02934 triacylglycerol lipas 74.5 7.9 0.00017 40.9 6.6 41 169-212 305-345 (515)
149 PF08237 PE-PPE: PE-PPE domain 73.7 13 0.00028 35.2 7.4 62 163-231 28-89 (225)
150 PRK14567 triosephosphate isome 72.9 9.9 0.00021 36.7 6.4 61 165-235 178-238 (253)
151 KOG1552 Predicted alpha/beta h 72.7 6 0.00013 38.0 4.7 60 387-470 192-251 (258)
152 PF10081 Abhydrolase_9: Alpha/ 72.3 8.3 0.00018 37.6 5.7 39 163-201 84-122 (289)
153 PLN02761 lipase class 3 family 72.1 10 0.00022 40.2 6.8 71 164-234 267-344 (527)
154 PF05448 AXE1: Acetyl xylan es 70.3 19 0.0004 36.2 8.0 140 74-234 66-211 (320)
155 PLN00413 triacylglycerol lipas 70.3 5 0.00011 42.0 3.9 39 170-211 269-307 (479)
156 PRK11071 esterase YqiA; Provis 70.1 11 0.00023 34.6 5.8 92 92-234 2-95 (190)
157 PLN02408 phospholipase A1 69.6 7.1 0.00015 39.7 4.8 65 166-234 179-243 (365)
158 PF05057 DUF676: Putative seri 69.4 7.9 0.00017 36.4 4.9 50 163-213 54-103 (217)
159 KOG2183 Prolylcarboxypeptidase 68.7 7 0.00015 40.1 4.5 63 136-202 111-181 (492)
160 PLN02802 triacylglycerol lipas 68.5 12 0.00026 39.7 6.3 65 166-234 309-373 (509)
161 COG4757 Predicted alpha/beta h 68.3 11 0.00023 35.9 5.2 65 137-206 58-123 (281)
162 PLN02847 triacylglycerol lipas 67.3 10 0.00022 40.9 5.6 54 169-229 235-288 (633)
163 PLN02310 triacylglycerol lipas 64.9 14 0.00031 38.1 6.0 65 166-234 186-251 (405)
164 PLN02162 triacylglycerol lipas 64.8 8.7 0.00019 40.2 4.4 40 169-211 262-301 (475)
165 PF08840 BAAT_C: BAAT / Acyl-C 64.3 9.9 0.00021 35.6 4.4 45 177-231 11-55 (213)
166 PF11187 DUF2974: Protein of u 64.0 13 0.00029 35.1 5.2 51 171-230 71-121 (224)
167 KOG3079 Uridylate kinase/adeny 63.8 3.9 8.5E-05 37.3 1.5 15 89-103 5-19 (195)
168 KOG2182 Hydrolytic enzymes of 62.5 59 0.0013 34.3 9.9 71 137-208 119-192 (514)
169 PF06259 Abhydrolase_8: Alpha/ 61.1 22 0.00048 32.4 5.9 67 135-208 62-129 (177)
170 PF03283 PAE: Pectinacetyleste 61.0 66 0.0014 32.9 10.0 139 87-233 46-198 (361)
171 KOG4569 Predicted lipase [Lipi 61.0 17 0.00037 36.7 5.7 59 170-233 156-214 (336)
172 PRK07868 acyl-CoA synthetase; 60.4 19 0.00041 42.1 6.7 61 387-471 297-361 (994)
173 PLN02429 triosephosphate isome 60.1 22 0.00048 35.4 6.1 60 166-235 239-299 (315)
174 COG4782 Uncharacterized protei 59.7 16 0.00034 37.0 5.0 121 89-236 114-238 (377)
175 PF01083 Cutinase: Cutinase; 59.1 22 0.00047 32.4 5.6 83 138-235 41-126 (179)
176 PF08840 BAAT_C: BAAT / Acyl-C 58.8 5.6 0.00012 37.3 1.7 48 387-452 115-163 (213)
177 PLN02561 triosephosphate isome 58.6 22 0.00048 34.3 5.7 59 166-234 180-239 (253)
178 COG2819 Predicted hydrolase of 58.2 80 0.0017 30.7 9.4 57 168-234 117-174 (264)
179 PRK07868 acyl-CoA synthetase; 58.1 18 0.00039 42.2 6.0 115 88-234 64-179 (994)
180 PF08538 DUF1749: Protein of u 57.2 20 0.00043 35.5 5.2 71 163-237 82-153 (303)
181 COG1073 Hydrolases of the alph 56.3 25 0.00054 33.5 5.9 60 388-470 233-296 (299)
182 COG0429 Predicted hydrolase of 55.2 39 0.00085 33.9 6.8 125 74-231 60-185 (345)
183 PLN03037 lipase class 3 family 54.9 27 0.00059 37.1 6.1 65 167-234 296-361 (525)
184 cd00311 TIM Triosephosphate is 53.8 38 0.00081 32.5 6.4 59 166-235 176-235 (242)
185 PF02450 LCAT: Lecithin:choles 53.5 12 0.00026 38.6 3.2 41 166-210 101-141 (389)
186 PF06821 Ser_hydrolase: Serine 53.3 22 0.00049 32.0 4.6 43 388-455 115-157 (171)
187 PF06821 Ser_hydrolase: Serine 51.9 19 0.00041 32.5 3.9 39 187-233 54-92 (171)
188 KOG1553 Predicted alpha/beta h 51.8 34 0.00074 34.4 5.8 74 139-231 271-344 (517)
189 PF06028 DUF915: Alpha/beta hy 51.3 39 0.00084 32.7 6.2 38 163-203 81-118 (255)
190 PF03959 FSH1: Serine hydrolas 50.3 14 0.0003 34.5 2.9 49 387-459 161-209 (212)
191 KOG3724 Negative regulator of 50.1 23 0.0005 39.4 4.7 98 92-206 90-200 (973)
192 PRK00042 tpiA triosephosphate 49.9 49 0.0011 31.9 6.6 59 166-235 180-239 (250)
193 COG3571 Predicted hydrolase of 49.9 22 0.00048 31.8 3.7 29 184-212 85-113 (213)
194 COG3545 Predicted esterase of 49.5 18 0.00039 32.8 3.2 36 187-231 58-93 (181)
195 PF12740 Chlorophyllase2: Chlo 48.6 40 0.00088 32.6 5.7 63 164-232 63-131 (259)
196 PLN02442 S-formylglutathione h 48.4 27 0.00058 34.2 4.7 49 385-453 215-264 (283)
197 KOG2369 Lecithin:cholesterol a 47.9 20 0.00044 37.5 3.7 73 388-471 374-452 (473)
198 PTZ00333 triosephosphate isome 47.8 41 0.00089 32.5 5.7 60 165-234 182-242 (255)
199 PRK14565 triosephosphate isome 47.2 43 0.00093 32.0 5.6 53 165-235 173-225 (237)
200 KOG1516 Carboxylesterase and r 46.9 1E+02 0.0022 33.2 9.2 34 172-206 180-213 (545)
201 KOG2551 Phospholipase/carboxyh 46.1 55 0.0012 30.9 6.0 58 387-469 163-222 (230)
202 KOG3967 Uncharacterized conser 45.5 69 0.0015 30.1 6.4 56 163-231 171-226 (297)
203 PF05049 IIGP: Interferon-indu 44.5 9.1 0.0002 39.2 0.7 59 89-149 32-97 (376)
204 PF12048 DUF3530: Protein of u 44.3 3.3E+02 0.0072 27.0 14.5 54 172-236 180-233 (310)
205 COG4425 Predicted membrane pro 44.2 44 0.00094 34.8 5.3 37 164-200 373-409 (588)
206 COG5510 Predicted small secret 44.1 23 0.0005 24.1 2.3 21 7-27 3-23 (44)
207 PF03403 PAF-AH_p_II: Platelet 42.1 13 0.00029 38.2 1.5 38 189-236 229-266 (379)
208 KOG3101 Esterase D [General fu 40.7 15 0.00033 34.3 1.4 67 185-261 138-204 (283)
209 COG3150 Predicted esterase [Ge 40.6 43 0.00094 30.2 4.2 56 163-237 41-96 (191)
210 PF14020 DUF4236: Protein of u 40.0 25 0.00055 25.4 2.2 15 138-153 40-54 (55)
211 PLN02517 phosphatidylcholine-s 39.8 28 0.0006 37.8 3.3 22 187-208 212-233 (642)
212 TIGR01839 PHA_synth_II poly(R) 38.1 5.6E+02 0.012 27.9 18.2 66 163-235 266-331 (560)
213 PRK13962 bifunctional phosphog 37.6 64 0.0014 35.6 5.8 61 165-235 574-635 (645)
214 PF05576 Peptidase_S37: PS-10 37.4 1.7E+02 0.0037 30.4 8.3 91 86-202 58-148 (448)
215 PF06414 Zeta_toxin: Zeta toxi 37.2 20 0.00042 33.1 1.6 35 88-123 11-51 (199)
216 TIGR03598 GTPase_YsxC ribosome 35.7 94 0.002 27.7 5.9 61 87-151 13-77 (179)
217 PLN03082 Iron-sulfur cluster a 35.4 36 0.00077 30.6 2.9 63 89-152 76-144 (163)
218 PF07224 Chlorophyllase: Chlor 35.3 45 0.00096 32.5 3.7 37 188-231 120-156 (307)
219 PF09292 Neil1-DNA_bind: Endon 35.1 23 0.00049 23.2 1.1 12 92-103 25-36 (39)
220 COG3596 Predicted GTPase [Gene 34.9 44 0.00096 32.6 3.6 59 89-151 36-100 (296)
221 COG3673 Uncharacterized conser 34.8 41 0.00088 33.6 3.4 68 136-209 65-143 (423)
222 PF00681 Plectin: Plectin repe 34.8 27 0.00059 23.8 1.6 33 229-261 11-43 (45)
223 PRK15492 triosephosphate isome 34.4 1.1E+02 0.0024 29.7 6.3 59 166-235 189-248 (260)
224 TIGR00419 tim triosephosphate 32.8 88 0.0019 29.2 5.2 70 139-234 133-204 (205)
225 PRK11190 Fe/S biogenesis prote 32.6 82 0.0018 29.1 4.9 63 93-156 25-95 (192)
226 PF00121 TIM: Triosephosphate 32.5 20 0.00044 34.4 0.9 61 165-235 177-238 (244)
227 KOG2624 Triglyceride lipase-ch 31.4 4.7E+02 0.01 27.2 10.7 28 387-414 332-359 (403)
228 PF10503 Esterase_phd: Esteras 31.3 44 0.00096 31.5 3.0 27 387-413 169-195 (220)
229 PF05277 DUF726: Protein of un 30.0 2.3E+02 0.0049 28.8 7.9 44 186-232 218-261 (345)
230 COG1075 LipA Predicted acetylt 29.0 73 0.0016 32.1 4.3 45 163-210 105-149 (336)
231 COG2945 Predicted hydrolase of 28.3 52 0.0011 30.4 2.8 56 387-468 149-204 (210)
232 PRK10081 entericidin B membran 28.2 59 0.0013 22.7 2.3 21 6-26 1-22 (48)
233 PF01738 DLH: Dienelactone hyd 27.7 2.2E+02 0.0048 26.1 7.1 62 385-466 143-209 (218)
234 COG0149 TpiA Triosephosphate i 27.6 2.7E+02 0.0058 26.9 7.6 76 138-236 161-239 (251)
235 cd01876 YihA_EngB The YihA (En 27.5 1.5E+02 0.0033 25.1 5.7 52 96-151 3-58 (170)
236 PLN02606 palmitoyl-protein thi 26.7 1.9E+02 0.0041 28.8 6.5 89 88-208 24-115 (306)
237 KOG1643 Triosephosphate isomer 26.6 98 0.0021 28.8 4.1 85 127-235 150-238 (247)
238 PF03583 LIP: Secretory lipase 26.5 1.9E+02 0.0042 28.4 6.7 66 166-235 46-116 (290)
239 TIGR01911 HesB_rel_seleno HesB 26.4 55 0.0012 26.3 2.3 17 93-110 28-44 (92)
240 KOG4540 Putative lipase essent 26.0 35 0.00075 33.4 1.3 34 173-206 261-294 (425)
241 COG5153 CVT17 Putative lipase 26.0 35 0.00075 33.4 1.3 34 173-206 261-294 (425)
242 TIGR03712 acc_sec_asp2 accesso 25.7 1.3E+02 0.0027 32.0 5.3 114 76-235 277-393 (511)
243 PF15613 WHIM2: WSTF, HB1, Itc 25.6 1.2E+02 0.0027 20.0 3.4 27 76-102 12-38 (38)
244 cd00412 pyrophosphatase Inorga 25.5 2.4E+02 0.0052 25.1 6.4 46 163-212 107-152 (155)
245 KOG3043 Predicted hydrolase re 24.9 1.4E+02 0.0031 28.3 5.0 78 381-469 158-238 (242)
246 KOG2541 Palmitoyl protein thio 24.9 2E+02 0.0044 28.1 6.1 92 88-210 21-114 (296)
247 PF04414 tRNA_deacylase: D-ami 24.7 1.9E+02 0.0041 27.2 5.8 48 162-212 104-152 (213)
248 PF13956 Ibs_toxin: Toxin Ibs, 24.5 32 0.00069 18.7 0.4 16 6-21 1-16 (19)
249 PRK06762 hypothetical protein; 24.5 39 0.00084 29.8 1.3 20 92-112 2-23 (166)
250 TIGR01840 esterase_phb esteras 22.8 72 0.0016 29.4 2.8 28 388-415 169-196 (212)
251 KOG3253 Predicted alpha/beta h 22.0 1.6E+02 0.0035 32.1 5.3 51 381-454 298-348 (784)
252 cd01853 Toc34_like Toc34-like 22.0 3.8E+02 0.0083 25.7 7.7 61 88-151 27-92 (249)
253 PRK14731 coaE dephospho-CoA ki 22.0 72 0.0016 29.6 2.6 32 90-122 3-36 (208)
254 PF06309 Torsin: Torsin; Inte 21.9 65 0.0014 27.6 2.0 16 88-103 49-64 (127)
255 TIGR03341 YhgI_GntY IscR-regul 21.7 1.7E+02 0.0037 26.9 4.9 64 92-156 23-94 (190)
256 PF01738 DLH: Dienelactone hyd 21.4 76 0.0016 29.3 2.6 54 166-230 77-130 (218)
257 COG3509 LpqC Poly(3-hydroxybut 21.2 2.7E+02 0.0059 27.6 6.3 67 392-458 213-282 (312)
258 PRK10115 protease 2; Provision 20.4 1.4E+02 0.003 33.4 4.9 55 387-459 605-661 (686)
259 PF00809 Pterin_bind: Pterin b 20.4 1.4E+02 0.003 27.8 4.2 39 139-194 165-203 (210)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-114 Score=880.61 Aligned_cols=419 Identities=51% Similarity=0.937 Sum_probs=382.1
Q ss_pred CCcceecCCCCCC-CCceeEEeEEEeecCCCceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCC
Q 011738 45 NEDLVTNLPGQPN-VDFRHYAGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDG 123 (478)
Q Consensus 45 ~~~~~~~l~g~~~-~~~~~~sGy~~~~~~~~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~ 123 (478)
+.++|+.|||++. +++++|||||+|+++.+++||||||||+++|+++||||||||||||||+ .|+|.|+|||+++.||
T Consensus 26 ~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl-~G~~~E~GPf~v~~~G 104 (454)
T KOG1282|consen 26 EADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSL-GGLFEENGPFRVKYNG 104 (454)
T ss_pred hhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccch-hhhhhhcCCeEEcCCC
Confidence 6688999999984 8899999999999888899999999999999999999999999999999 5999999999999999
Q ss_pred CccccCCCCcccccceeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchH
Q 011738 124 RGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIP 203 (478)
Q Consensus 124 ~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp 203 (478)
.+|..||||||+.||||||||||||||||+++..++.+ +++.+|+|++.||++||++||||++|+|||+||||||||||
T Consensus 105 ~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~-~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP 183 (454)
T KOG1282|consen 105 KTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKT-GDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVP 183 (454)
T ss_pred CcceeCCccccccccEEEEecCCcCCccccCCCCcCcC-CcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehH
Confidence 89999999999999999999999999999998877775 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCC-CCceeeeeeeEecCCCCCchhhhhhhHHHhhhcccCCHHHHHHHHhhcccCCC----CCCChHHHHH
Q 011738 204 ELTELIHDRNKD-PSLYIDLKGILLGNPETSTAEDWQGLVDYAWSHAVVSDETHKIILRTCDFNSS----DPWSSDECSD 278 (478)
Q Consensus 204 ~la~~i~~~n~~-~~~~inLkGi~IGng~~dp~~~~~~~~~~a~~~gli~~~~~~~~~~~c~~~~~----~~~~~~~C~~ 278 (478)
+||++|++.|+. ..+.|||||++||||++|+..+..++.+|+|.||+|+++.++.+++.|..... ....+.+|.+
T Consensus 184 ~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~~~C~~ 263 (454)
T KOG1282|consen 184 ALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSNTKCNK 263 (454)
T ss_pred HHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCCchhHHHH
Confidence 999999999986 46889999999999999999999999999999999999999999999987321 2344779999
Q ss_pred HHHHHH-HHcCCCCcccccccCCCCCcchhhHHHHhhcCCCCccccCCCCCCchhHHHHhcCcHHHHhHcCCCCcccccc
Q 011738 279 AVAEVL-KQYKEIDIYSIYTSVCSSNSLESSQLLMKRTSKMMPRIMGGYDPCLDNYAKAFYNRLDVQKALHVSDGHLLRN 357 (478)
Q Consensus 279 ~~~~~~-~~~~~in~Ydi~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~~~~~~YLN~~~Vr~aL~v~~~~~~~~ 357 (478)
+++.+. ...++++.|+++.+.|...... ++.++....+++|.+...++|||+++||+||||+.+..+ +
T Consensus 264 ~~~~~~~~~~~~i~~y~i~~~~C~~~~~~----------~~~~~~~~~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~-~ 332 (454)
T KOG1282|consen 264 AVEEFDSKTTGDIDNYYILTPDCYPTSYE----------LKKPTDCYGYDPCLSDYAEKYLNRPEVRKALHANKTSIG-K 332 (454)
T ss_pred HHHHHHHHHhccCchhhhcchhhcccccc----------ccccccccccCCchhhhHHHhcCCHHHHHHhCCCCCCCC-c
Confidence 999888 5567899999999999752110 001112345689998766999999999999999875333 7
Q ss_pred ccccccccccCCCCCCCChHHHHHHHHHcC-CeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceec-CeeeEEEE
Q 011738 358 WSICNTTMYEGWPQPKPSVLPIYTKLIEAG-LRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQ-KQVGGWVQ 435 (478)
Q Consensus 358 w~~cn~~v~~~~~d~~~~~~~~l~~LL~~~-irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~-~~~~Gy~k 435 (478)
|+.||..|...|.+...++++.+..++.++ +|||||+||.|++||+.|+++|+++|+++...+|+||+++ +|+|||++
T Consensus 333 W~~Cn~~v~~~~~~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~ 412 (454)
T KOG1282|consen 333 WERCNDEVNYNYNDDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTK 412 (454)
T ss_pred ccccChhhhcccccCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEE
Confidence 999999998889999999999999999865 9999999999999999999999999999999999999996 89999999
Q ss_pred EeCCeEEEEEcCCcccccCCChHHHHHHHHHHHcCCCCCCC
Q 011738 436 EYAGLTFVTVRGAGHAVPVFKPSDSLALFSSFLLGDPLPSV 476 (478)
Q Consensus 436 ~~~~ltf~~V~~AGHmvP~dqP~~a~~mi~~fl~~~~~~~~ 476 (478)
+|+||+|+||+|||||||+|||++|++||++||.|+++++.
T Consensus 413 ~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~fl~g~~l~~~ 453 (454)
T KOG1282|consen 413 TYGGLTFATVRGAGHMVPYDKPESALIMFQRFLNGQPLPST 453 (454)
T ss_pred EecCEEEEEEeCCcccCCCCCcHHHHHHHHHHHcCCCCCCC
Confidence 99999999999999999999999999999999999999875
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=1.3e-100 Score=787.01 Aligned_cols=405 Identities=32% Similarity=0.595 Sum_probs=346.8
Q ss_pred CCcceecCCCCC-CCCceeEEeEEEeecCCCceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCC
Q 011738 45 NEDLVTNLPGQP-NVDFRHYAGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDG 123 (478)
Q Consensus 45 ~~~~~~~l~g~~-~~~~~~~sGy~~~~~~~~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~ 123 (478)
..++|+.|||++ .+++++||||++|+++.+++||||||||+++|+++|++|||||||||||+ +|+|.|+|||+++.++
T Consensus 21 ~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~-~g~f~e~GP~~~~~~~ 99 (437)
T PLN02209 21 SGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCL-SGLFFENGPLALKNKV 99 (437)
T ss_pred ccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHh-hhHHHhcCCceeccCC
Confidence 557899999995 58899999999998877789999999999999999999999999999999 8999999999998773
Q ss_pred -----CccccCCCCcccccceeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCC
Q 011738 124 -----RGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYA 198 (478)
Q Consensus 124 -----~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYg 198 (478)
.++++||+||++.|||||||||+||||||+....... +++++|++++.||+.||++||+|+++|+||+|||||
T Consensus 100 ~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~--~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYa 177 (437)
T PLN02209 100 YNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERT--SDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYS 177 (437)
T ss_pred CCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc--CCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcC
Confidence 3789999999999999999999999999987654443 456778999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHhcCC-CCceeeeeeeEecCCCCCchhhhhhhHHHhhhcccCCHHHHHHHHhhcccCC-CCCCChHHH
Q 011738 199 GRYIPELTELIHDRNKD-PSLYIDLKGILLGNPETSTAEDWQGLVDYAWSHAVVSDETHKIILRTCDFNS-SDPWSSDEC 276 (478)
Q Consensus 199 G~yvp~la~~i~~~n~~-~~~~inLkGi~IGng~~dp~~~~~~~~~~a~~~gli~~~~~~~~~~~c~~~~-~~~~~~~~C 276 (478)
|||||.+|.+|+++|++ .+.+||||||+||||++||..|..++.+|++.+|+|++++++.+++.|.... ........|
T Consensus 178 G~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~~~~~~~~C 257 (437)
T PLN02209 178 GMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFSVDPSNKKC 257 (437)
T ss_pred ceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccccCCCChHHH
Confidence 99999999999998865 4578999999999999999999999999999999999999999999996421 112346789
Q ss_pred HHHHHHHHHHcCCCCcccccccCCCCCcchhhHHHHhhcCCCCccccCCCCCCch---hHHHHhcCcHHHHhHcCCCCcc
Q 011738 277 SDAVAEVLKQYKEIDIYSIYTSVCSSNSLESSQLLMKRTSKMMPRIMGGYDPCLD---NYAKAFYNRLDVQKALHVSDGH 353 (478)
Q Consensus 277 ~~~~~~~~~~~~~in~Ydi~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~---~~~~~YLN~~~Vr~aL~v~~~~ 353 (478)
..+++........+|.|++..+.|..... .....+|.. ..+..|||+++||+||||+...
T Consensus 258 ~~~i~~~~~~~~~~~~~~~~~~~c~~~~~-----------------~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~ 320 (437)
T PLN02209 258 LKLVEEYHKCTDNINSHHTLIANCDDSNT-----------------QHISPDCYYYPYHLVECWANNESVREALHVDKGS 320 (437)
T ss_pred HHHHHHHHHHhhcCCcccccccccccccc-----------------ccCCCCcccccHHHHHHHhCCHHHHHHhCCCCCC
Confidence 99888766666778888765556753211 011234643 4678999999999999998421
Q ss_pred ccccccccccccccCCCCCCCChHHHHHHHHHcCCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEE
Q 011738 354 LLRNWSICNTTMYEGWPQPKPSVLPIYTKLIEAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGW 433 (478)
Q Consensus 354 ~~~~w~~cn~~v~~~~~d~~~~~~~~l~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy 433 (478)
...|..|+..+ .+.+...++++.+..+|.+|+|||||+||.|++||+.|+++|+++|+|++.++|++|+++++++||
T Consensus 321 -~~~w~~~~~~~--~~~~d~~~~~~~~~~~l~~girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~ 397 (437)
T PLN02209 321 -IGEWIRDHRGI--PYKSDIRSSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGY 397 (437)
T ss_pred -CCCCccccchh--hcccchhhhHHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeE
Confidence 24799998754 344333344555555566799999999999999999999999999999999999999999999999
Q ss_pred EEEeCC-eEEEEEcCCcccccCCChHHHHHHHHHHHcCCCC
Q 011738 434 VQEYAG-LTFVTVRGAGHAVPVFKPSDSLALFSSFLLGDPL 473 (478)
Q Consensus 434 ~k~~~~-ltf~~V~~AGHmvP~dqP~~a~~mi~~fl~~~~~ 473 (478)
+|+|+| |||++|+||||||| |||++|++||++|+.+++|
T Consensus 398 vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~~fi~~~~l 437 (437)
T PLN02209 398 TRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQRWISGQPL 437 (437)
T ss_pred EEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHHHHHcCCCC
Confidence 999996 99999999999998 6999999999999999875
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=1.5e-100 Score=786.59 Aligned_cols=402 Identities=33% Similarity=0.627 Sum_probs=348.6
Q ss_pred CCcceecCCCCC-CCCceeEEeEEEeecCCCceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCC-
Q 011738 45 NEDLVTNLPGQP-NVDFRHYAGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTD- 122 (478)
Q Consensus 45 ~~~~~~~l~g~~-~~~~~~~sGy~~~~~~~~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~- 122 (478)
..+.|++|||+. .+++++||||++|+++.++++|||||||+++|+++|++|||||||||||+ .|+|+|+|||+++.+
T Consensus 19 ~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~-~g~~~e~GP~~~~~~~ 97 (433)
T PLN03016 19 SASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCL-GGIIFENGPVGLKFEV 97 (433)
T ss_pred ccCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHH-HHHHHhcCCceeeccc
Confidence 347799999984 57899999999998766789999999999999999999999999999999 799999999998743
Q ss_pred ----CCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCC
Q 011738 123 ----GRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYA 198 (478)
Q Consensus 123 ----~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYg 198 (478)
+.++++||+||++.|||||||||+||||||+....... +++++|++++.||+.||++||+|+++||||+|||||
T Consensus 98 ~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~--~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYa 175 (433)
T PLN03016 98 FNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKT--GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYS 175 (433)
T ss_pred cCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc--CCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCcc
Confidence 34789999999999999999999999999987655432 455677999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHhcCC-CCceeeeeeeEecCCCCCchhhhhhhHHHhhhcccCCHHHHHHHHhhcccCCC-CCCChHHH
Q 011738 199 GRYIPELTELIHDRNKD-PSLYIDLKGILLGNPETSTAEDWQGLVDYAWSHAVVSDETHKIILRTCDFNSS-DPWSSDEC 276 (478)
Q Consensus 199 G~yvp~la~~i~~~n~~-~~~~inLkGi~IGng~~dp~~~~~~~~~~a~~~gli~~~~~~~~~~~c~~~~~-~~~~~~~C 276 (478)
|||||.+|++|+++|+. ...+||||||+||||+++|..|..++.+|+|.||||++++++.+++.|..... .......|
T Consensus 176 G~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~~C 255 (433)
T PLN03016 176 GMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQC 255 (433)
T ss_pred ceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchHHH
Confidence 99999999999998875 45789999999999999999999999999999999999999999999974311 12346789
Q ss_pred HHHHHHHHHHcCCCCcccccccCCCCCcchhhHHHHhhcCCCCccccCCCCCCch---hHHHHhcCcHHHHhHcCCCCcc
Q 011738 277 SDAVAEVLKQYKEIDIYSIYTSVCSSNSLESSQLLMKRTSKMMPRIMGGYDPCLD---NYAKAFYNRLDVQKALHVSDGH 353 (478)
Q Consensus 277 ~~~~~~~~~~~~~in~Ydi~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~---~~~~~YLN~~~Vr~aL~v~~~~ 353 (478)
..+++......+++|+|||+.+.|..... ..+.|.. ..+..|||+++||+||||++..
T Consensus 256 ~~~~~~~~~~~~~~n~yni~~~~~~~~~~-------------------~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~ 316 (433)
T PLN03016 256 LKLTEEYHKCTAKINIHHILTPDCDVTNV-------------------TSPDCYYYPYHLIECWANDESVREALHIEKGS 316 (433)
T ss_pred HHHHHHHHHHhcCCChhhccCCccccccc-------------------CCCcccccchHHHHHHhCCHHHHHHhCCCCCC
Confidence 99988777777899999999766742100 1135653 4678999999999999997521
Q ss_pred ccccccccccccccCCC-CCCCChHHHHHHHHHcCCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeE
Q 011738 354 LLRNWSICNTTMYEGWP-QPKPSVLPIYTKLIEAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGG 432 (478)
Q Consensus 354 ~~~~w~~cn~~v~~~~~-d~~~~~~~~l~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~G 432 (478)
...|..||..|. +. |.. ++++.+..++.+++|||||+||.|++||+.|+++|+++|+|++.++|++|+++++++|
T Consensus 317 -~~~w~~cn~~v~--~~~d~~-~~~~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G 392 (433)
T PLN03016 317 -KGKWARCNRTIP--YNHDIV-SSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAG 392 (433)
T ss_pred -CCCCccCCcccc--cccccc-hhhHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeee
Confidence 247999999886 44 333 4555555666679999999999999999999999999999999999999999999999
Q ss_pred EEEEeCC-eEEEEEcCCcccccCCChHHHHHHHHHHHcCCCC
Q 011738 433 WVQEYAG-LTFVTVRGAGHAVPVFKPSDSLALFSSFLLGDPL 473 (478)
Q Consensus 433 y~k~~~~-ltf~~V~~AGHmvP~dqP~~a~~mi~~fl~~~~~ 473 (478)
|+|+|++ |||++|++|||||| |||++|++||++||+++++
T Consensus 393 ~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~~Fi~~~~l 433 (433)
T PLN03016 393 YTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQRWISGQPL 433 (433)
T ss_pred EEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHHHHHcCCCC
Confidence 9999985 99999999999998 7999999999999999875
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=5.4e-100 Score=790.18 Aligned_cols=402 Identities=40% Similarity=0.756 Sum_probs=329.3
Q ss_pred CCCC-CCCceeEEeEEEeecCCCceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCC-CccccCC
Q 011738 53 PGQP-NVDFRHYAGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDG-RGLQFNP 130 (478)
Q Consensus 53 ~g~~-~~~~~~~sGy~~~~~~~~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~-~~~~~n~ 130 (478)
||.. .+++++|||||+|+++.+++||||||||+++|+++||||||||||||||+ +|+|.|+|||+++.++ .+++.||
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n~ 79 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDNP 79 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-T
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccc-cccccccCceEEeecccccccccc
Confidence 5554 36789999999999777899999999999999999999999999999999 8999999999999553 6899999
Q ss_pred CCcccccceeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHH
Q 011738 131 YAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIH 210 (478)
Q Consensus 131 ~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~ 210 (478)
+||++.+|||||||||||||||+.....+.+ +++++|++++.||+.||++||+|+++|+||+||||||+|||.+|.+|+
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~-~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~ 158 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDYVW-NDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYIL 158 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGGS--SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeeccccccccc-hhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhh
Confidence 9999999999999999999999987765554 899999999999999999999999999999999999999999999999
Q ss_pred HhcCC-CCceeeeeeeEecCCCCCchhhhhhhHHHhhhcccCCHHHHHHHHhhcccCCCCCCChHHHHHHHHHHHH----
Q 011738 211 DRNKD-PSLYIDLKGILLGNPETSTAEDWQGLVDYAWSHAVVSDETHKIILRTCDFNSSDPWSSDECSDAVAEVLK---- 285 (478)
Q Consensus 211 ~~n~~-~~~~inLkGi~IGng~~dp~~~~~~~~~~a~~~gli~~~~~~~~~~~c~~~~~~~~~~~~C~~~~~~~~~---- 285 (478)
++|+. ..++||||||+||||++||..|..++.+|++.||+|++++++.+.+.|............|.++.+.+..
T Consensus 159 ~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 238 (415)
T PF00450_consen 159 QQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACPQCQKAITECAAALDELSCQYAI 238 (415)
T ss_dssp HHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSHSSSCCHHHHHHHHHHHHHHCHH
T ss_pred hccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccccccchhhHHHHHHHhhhhhccc
Confidence 99976 3578999999999999999999999999999999999999999999986431234457889988877665
Q ss_pred --HcCCCCcccccccCCCCCcchhhHHHHhhcCCCCccccCCCCCCchhHHHHhcCcHHHHhHcCCCCcccccccccccc
Q 011738 286 --QYKEIDIYSIYTSVCSSNSLESSQLLMKRTSKMMPRIMGGYDPCLDNYAKAFYNRLDVQKALHVSDGHLLRNWSICNT 363 (478)
Q Consensus 286 --~~~~in~Ydi~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~~~~~~YLN~~~Vr~aL~v~~~~~~~~w~~cn~ 363 (478)
..+++|+||++.++|..... .. ......+++....+..|||+++||++|||+.. ....|+.|+.
T Consensus 239 ~~~~~~~n~Ydi~~~~~~~~~~----------~~---~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~-~~~~w~~~~~ 304 (415)
T PF00450_consen 239 SQCNGGINPYDIRQPCYNPSRS----------SY---DNSPSNDPPDDDYLEAYLNRPDVREALHVPVD-SNVNWQSCND 304 (415)
T ss_dssp HHHHTTSETTSTTSEETT-SHC----------TT---CCCCTTTTTCHHHHHHHHTSHHHHHHTT-STT-TSSS--SB-H
T ss_pred ccccCCcceeeeeccccccccc----------cc---cccccccccchhhHHHHhccHHHHHhhCCCcc-cCCcccccCc
Confidence 34799999999864431100 00 00011223334788999999999999999721 1358999999
Q ss_pred cc-ccC-CCCCCCChHHHHHHHHHcCCeEEEEecCCCcccChhhHHHHHHHcCCCCCccccccee--cCeeeEEEEEeCC
Q 011738 364 TM-YEG-WPQPKPSVLPIYTKLIEAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYH--QKQVGGWVQEYAG 439 (478)
Q Consensus 364 ~v-~~~-~~d~~~~~~~~l~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~--~~~~~Gy~k~~~~ 439 (478)
.| +.. ..+.+.++.+.++.||++++|||||+||.|++||+.|+++|+++|+|+++++|++|.. +++++||+|+++|
T Consensus 305 ~V~~~~~~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ 384 (415)
T PF00450_consen 305 AVNFNWLYDDFMPSSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGN 384 (415)
T ss_dssp HHHHHCCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETT
T ss_pred ccccccccccccccchhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEecc
Confidence 88 433 3478899999999999999999999999999999999999999999999999999987 8999999999999
Q ss_pred eEEEEEcCCcccccCCChHHHHHHHHHHHcC
Q 011738 440 LTFVTVRGAGHAVPVFKPSDSLALFSSFLLG 470 (478)
Q Consensus 440 ltf~~V~~AGHmvP~dqP~~a~~mi~~fl~~ 470 (478)
|||++|++||||||+|||+++++||++||+|
T Consensus 385 ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 385 LTFVTVRGAGHMVPQDQPEAALQMFRRFLKG 415 (415)
T ss_dssp EEEEEETT--SSHHHHSHHHHHHHHHHHHCT
T ss_pred EEEEEEcCCcccChhhCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999976
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=2.1e-94 Score=750.01 Aligned_cols=384 Identities=30% Similarity=0.562 Sum_probs=336.3
Q ss_pred CceeEEeEEEeec-CCCceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCccccc
Q 011738 59 DFRHYAGYVTVNE-HNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEA 137 (478)
Q Consensus 59 ~~~~~sGy~~~~~-~~~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~ 137 (478)
++++|||||+|++ ..+++||||||||+++|+++|++|||||||||||+ +|+|.|||||+++.++.++..||+||++.+
T Consensus 44 ~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~ 122 (462)
T PTZ00472 44 SVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSM-FALLAENGPCLMNETTGDIYNNTYSWNNEA 122 (462)
T ss_pred CCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCCceeECCccccccc
Confidence 5689999999975 45689999999999999999999999999999999 899999999999999778999999999999
Q ss_pred ceeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCC-C
Q 011738 138 NMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKD-P 216 (478)
Q Consensus 138 ~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~-~ 216 (478)
||||||||+||||||+... ++.. +++++|+|+++||+.||++||+++.+++||+||||||+|+|.+|.+|+++|+. .
T Consensus 123 ~~l~iDqP~G~G~S~~~~~-~~~~-~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~ 200 (462)
T PTZ00472 123 YVIYVDQPAGVGFSYADKA-DYDH-NESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGD 200 (462)
T ss_pred CeEEEeCCCCcCcccCCCC-CCCC-ChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccC
Confidence 9999999999999998653 3443 78899999999999999999999999999999999999999999999999876 3
Q ss_pred CceeeeeeeEecCCCCCchhhhhhhHHHhhh-------cccCCHHHHHHHHh---hcccC-CC----CCCChHHHHHHHH
Q 011738 217 SLYIDLKGILLGNPETSTAEDWQGLVDYAWS-------HAVVSDETHKIILR---TCDFN-SS----DPWSSDECSDAVA 281 (478)
Q Consensus 217 ~~~inLkGi~IGng~~dp~~~~~~~~~~a~~-------~gli~~~~~~~~~~---~c~~~-~~----~~~~~~~C~~~~~ 281 (478)
..+||||||+||||++||..|+.++.+|+|. +|+|++++++++.+ .|... .. .......|..+..
T Consensus 201 ~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~~~~c~~a~~ 280 (462)
T PTZ00472 201 GLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDADSSCSVARA 280 (462)
T ss_pred CceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCcchHHHHHHH
Confidence 5789999999999999999999999999996 57999999988865 34311 00 0112335655444
Q ss_pred HHHH-----HcCCCCcccccccCCCCCcchhhHHHHhhcCCCCccccCCCCCCch-hHHHHhcCcHHHHhHcCCCCcccc
Q 011738 282 EVLK-----QYKEIDIYSIYTSVCSSNSLESSQLLMKRTSKMMPRIMGGYDPCLD-NYAKAFYNRLDVQKALHVSDGHLL 355 (478)
Q Consensus 282 ~~~~-----~~~~in~Ydi~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~-~~~~~YLN~~~Vr~aL~v~~~~~~ 355 (478)
.|.. ..+++|+||||.+ |.. ++|.. ..+..|||+++||+||||+.
T Consensus 281 ~c~~~~~~~~~~g~n~Ydi~~~-c~~------------------------~~c~~~~~~~~yLN~~~Vq~AL~v~~---- 331 (462)
T PTZ00472 281 LCNEYIAVYSATGLNNYDIRKP-CIG------------------------PLCYNMDNTIAFMNREDVQSSLGVKP---- 331 (462)
T ss_pred HHHHHHHHHHhcCCChhheecc-CCC------------------------CCccCHHHHHHHhCCHHHHHHhCCCC----
Confidence 3322 1368999999964 643 45764 57899999999999999974
Q ss_pred ccccccccccccCCC-CCCCChHHHHHHHHHcCCeEEEEecCCCcccChhhHHHHHHHcCCCCCc-----ccccc-eecC
Q 011738 356 RNWSICNTTMYEGWP-QPKPSVLPIYTKLIEAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITK-----SWRPW-YHQK 428 (478)
Q Consensus 356 ~~w~~cn~~v~~~~~-d~~~~~~~~l~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~-----~~~~w-~~~~ 428 (478)
..|+.|+..|+..+. |.+.++.+.++.||++|+|||||+||.|++||+.|+++|+++|+|++++ +|++| .+++
T Consensus 332 ~~w~~c~~~V~~~~~~D~~~~~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~ 411 (462)
T PTZ00472 332 ATWQSCNMEVNLMFEMDWMKNFNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDG 411 (462)
T ss_pred CCceeCCHHHHHHhhhccccchHHHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCC
Confidence 479999999988877 7778889999999999999999999999999999999999999999976 56899 5689
Q ss_pred eeeEEEEEeC-----CeEEEEEcCCcccccCCChHHHHHHHHHHHcCCCCC
Q 011738 429 QVGGWVQEYA-----GLTFVTVRGAGHAVPVFKPSDSLALFSSFLLGDPLP 474 (478)
Q Consensus 429 ~~~Gy~k~~~-----~ltf~~V~~AGHmvP~dqP~~a~~mi~~fl~~~~~~ 474 (478)
+++||+|+++ ||+|++|++||||||+|||+++++|+++|+.++++.
T Consensus 412 ~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d~P~~~~~~i~~fl~~~~~~ 462 (462)
T PTZ00472 412 RWAGLVRSAASNTSSGFSFVQVYNAGHMVPMDQPAVALTMINRFLRNRPLS 462 (462)
T ss_pred EeceEEEEEecccCCCeEEEEECCCCccChhhHHHHHHHHHHHHHcCCCCC
Confidence 9999999999 999999999999999999999999999999998763
No 6
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=8.9e-74 Score=571.13 Aligned_cols=312 Identities=32% Similarity=0.587 Sum_probs=265.8
Q ss_pred ccceeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCC
Q 011738 136 EANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKD 215 (478)
Q Consensus 136 ~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~ 215 (478)
.|||||||||+||||||+++..... +++++|++++.||+.||++||+|+++||||+||||||||||.+|.+|+++|+.
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~~--~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~ 78 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDKT--GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYI 78 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCcc--ccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccc
Confidence 4899999999999999987654443 55667799999999999999999999999999999999999999999998865
Q ss_pred -CCceeeeeeeEecCCCCCchhhhhhhHHHhhhcccCCHHHHHHHHhhcccCCC-CCCChHHHHHHHHHHHHHcCCCCcc
Q 011738 216 -PSLYIDLKGILLGNPETSTAEDWQGLVDYAWSHAVVSDETHKIILRTCDFNSS-DPWSSDECSDAVAEVLKQYKEIDIY 293 (478)
Q Consensus 216 -~~~~inLkGi~IGng~~dp~~~~~~~~~~a~~~gli~~~~~~~~~~~c~~~~~-~~~~~~~C~~~~~~~~~~~~~in~Y 293 (478)
..++||||||+|||||++|..+..++.+|+|.||+|++++++.+++.|..... .......|.++........+++|+|
T Consensus 79 ~~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~ 158 (319)
T PLN02213 79 CCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIH 158 (319)
T ss_pred ccCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcCCHh
Confidence 45789999999999999999999999999999999999999999999964311 1234568999988777677889999
Q ss_pred cccccCCCCCcchhhHHHHhhcCCCCccccCCCCCCch---hHHHHhcCcHHHHhHcCCCCccccccccccccccccCCC
Q 011738 294 SIYTSVCSSNSLESSQLLMKRTSKMMPRIMGGYDPCLD---NYAKAFYNRLDVQKALHVSDGHLLRNWSICNTTMYEGWP 370 (478)
Q Consensus 294 di~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~---~~~~~YLN~~~Vr~aL~v~~~~~~~~w~~cn~~v~~~~~ 370 (478)
|++.+.|..... ..+.|.. ..+..|||+++||+||||++.. ...|+.||..|. +.
T Consensus 159 ~~~~~~~~~~~~-------------------~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~-~~~w~~c~~~v~--~~ 216 (319)
T PLN02213 159 HILTPDCDVTNV-------------------TSPDCYYYPYHLIECWANDESVREALHIEKGS-KGKWARCNRTIP--YN 216 (319)
T ss_pred hcccCcccCccC-------------------CCCCcccchhHHHHHHhCCHHHHHHhCcCCCC-CCCCccCCcccc--cc
Confidence 998665642100 0135653 4689999999999999997421 247999999886 44
Q ss_pred -CCCCChHHHHHHHHHcCCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCC-eEEEEEcCC
Q 011738 371 -QPKPSVLPIYTKLIEAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAG-LTFVTVRGA 448 (478)
Q Consensus 371 -d~~~~~~~~l~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~-ltf~~V~~A 448 (478)
|.. +.++.+..+|..++|||||+||.|++||+.|+++|+++|+|++.++|++|+++++++||+|+|++ |||++|++|
T Consensus 217 ~d~~-~~~~~~~~~l~~~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~A 295 (319)
T PLN02213 217 HDIV-SSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAG 295 (319)
T ss_pred cccc-cchHHHHHHHhcCceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCC
Confidence 433 44555555666789999999999999999999999999999999999999999999999999986 999999999
Q ss_pred cccccCCChHHHHHHHHHHHcCCCC
Q 011738 449 GHAVPVFKPSDSLALFSSFLLGDPL 473 (478)
Q Consensus 449 GHmvP~dqP~~a~~mi~~fl~~~~~ 473 (478)
||||| +||+++++||++||.++++
T Consensus 296 GHmV~-~qP~~al~m~~~fi~~~~~ 319 (319)
T PLN02213 296 GHTAE-YRPNETFIMFQRWISGQPL 319 (319)
T ss_pred CCCCC-cCHHHHHHHHHHHHcCCCC
Confidence 99998 6999999999999999865
No 7
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-67 Score=530.59 Aligned_cols=384 Identities=26% Similarity=0.445 Sum_probs=314.3
Q ss_pred CCceeEEeEEEeecCCCceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCC-CccccCCCCcccc
Q 011738 58 VDFRHYAGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDG-RGLQFNPYAWNKE 136 (478)
Q Consensus 58 ~~~~~~sGy~~~~~~~~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~-~~~~~n~~sw~~~ 136 (478)
+++++|+||.... ..+|||+||++++|.++|+|+||||||||||+ +|+|.|+||.+|+.+. +.--.||+||+++
T Consensus 72 lpv~~~~g~~d~e----d~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~-~g~l~elGP~rI~~~~~P~~~~NP~SW~~~ 146 (498)
T COG2939 72 LPVRDYTGYPDAE----DFFFFYTFESPNDPANRPVIFWLNGGPGCSSV-TGLLGELGPKRIQSGTSPSYPDNPGSWLDF 146 (498)
T ss_pred cchhhccCCcccc----eeEEEEEecCCCCCCCCceEEEecCCCChHhh-hhhhhhcCCeeeeCCCCCCCCCCccccccC
Confidence 3456677773332 23999999999999999999999999999999 8999999999999984 2222599999999
Q ss_pred cceeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCC--cEEEEeccCCccchHHHHHHHHHhcC
Q 011738 137 ANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRR--TFYIAGESYAGRYIPELTELIHDRNK 214 (478)
Q Consensus 137 ~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~--~~~i~GeSYgG~yvp~la~~i~~~n~ 214 (478)
+||||||||+|||||++.. .+.+. +...+.+|++.|++.||+.||++.+. ++||+||||||+|+|.||.+|+++|.
T Consensus 147 adLvFiDqPvGTGfS~a~~-~e~~~-d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~ 224 (498)
T COG2939 147 ADLVFIDQPVGTGFSRALG-DEKKK-DFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNI 224 (498)
T ss_pred CceEEEecCcccCcccccc-ccccc-chhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhcc
Confidence 9999999999999999732 22333 77889999999999999999999877 99999999999999999999999875
Q ss_pred CCCceeeeeeeEecCC-CCCchhhhhhhHHHhhhc----ccCCHHHHHHHHhhcccCC------C--CCCChHHHHHHHH
Q 011738 215 DPSLYIDLKGILLGNP-ETSTAEDWQGLVDYAWSH----AVVSDETHKIILRTCDFNS------S--DPWSSDECSDAVA 281 (478)
Q Consensus 215 ~~~~~inLkGi~IGng-~~dp~~~~~~~~~~a~~~----gli~~~~~~~~~~~c~~~~------~--~~~~~~~C~~~~~ 281 (478)
..+-.+||++++|||| +|+|..++..+..+++.. +.++.+.++++++.|+... . +......|..+..
T Consensus 225 ~~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~~ 304 (498)
T COG2939 225 ALNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENASA 304 (498)
T ss_pred ccCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHHH
Confidence 4567899999999999 999999999999999854 4567788888888776431 1 2233457887776
Q ss_pred HHHHHc------CC---CCcccccccCCCCCcchhhHHHHhhcCCCCccccCCCCCCch--hHHHHhcCcHHHHhHcCCC
Q 011738 282 EVLKQY------KE---IDIYSIYTSVCSSNSLESSQLLMKRTSKMMPRIMGGYDPCLD--NYAKAFYNRLDVQKALHVS 350 (478)
Q Consensus 282 ~~~~~~------~~---in~Ydi~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~--~~~~~YLN~~~Vr~aL~v~ 350 (478)
.|.... .+ +|.||++.. |..... ...|++ .....|+|...++++++..
T Consensus 305 ~~~~~~~~~~~r~~~~~~n~y~~r~~-~~d~g~--------------------~~~~y~~~~~~ld~~~~~~~~~~~~~~ 363 (498)
T COG2939 305 YLTGLMREYVGRAGGRLLNVYDIREE-CRDPGL--------------------GGSCYDTLSTSLDYFNFDPEQEVNDPE 363 (498)
T ss_pred HHHhcchhhhccccccccccccchhh-cCCCCc--------------------ccccccceeeccccccccchhcccccc
Confidence 665432 34 889999863 542110 123554 4567888888889988876
Q ss_pred CccccccccccccccccCCC----CCCCChHHHHHHHHHcCCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccc----
Q 011738 351 DGHLLRNWSICNTTMYEGWP----QPKPSVLPIYTKLIEAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWR---- 422 (478)
Q Consensus 351 ~~~~~~~w~~cn~~v~~~~~----d~~~~~~~~l~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~---- 422 (478)
. ..|..|+..+..+|. +...+....+..++.+++.+++|.|+.|.+||+.|++.|..+|+|.+...|.
T Consensus 364 ~----d~~~~c~t~a~~~f~~~~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~d~~~ 439 (498)
T COG2939 364 V----DNISGCTTDAMTDFLTFTGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGYFDAST 439 (498)
T ss_pred c----cchhccchHHHHhhhhhcCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecchhhhcC
Confidence 4 479999999988772 5667777888999999999999999999999999999999999999988653
Q ss_pred -ccee--cCeeeEEEEEeCCeEEEEEcCCcccccCCChHHHHHHHHHHHcCCCC
Q 011738 423 -PWYH--QKQVGGWVQEYAGLTFVTVRGAGHAVPVFKPSDSLALFSSFLLGDPL 473 (478)
Q Consensus 423 -~w~~--~~~~~Gy~k~~~~ltf~~V~~AGHmvP~dqP~~a~~mi~~fl~~~~~ 473 (478)
+|.. ..+..|-+++++|++|+.++.||||||+|+|+.+++|++.|+.+...
T Consensus 440 ~~~~~~~t~e~~~~~~s~~n~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~~~~ 493 (498)
T COG2939 440 PFFWSRLTLEEMGGYKSYRNLTFLRIYEAGHMVPYDRPESSLEMVNLWINGYGA 493 (498)
T ss_pred CCcccccchhhcccccccCCceEEEEecCcceeecCChHHHHHHHHHHHhhccc
Confidence 3433 45777777888899999999999999999999999999999988433
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-67 Score=495.80 Aligned_cols=394 Identities=23% Similarity=0.408 Sum_probs=323.0
Q ss_pred eEEeEEEeecCCCceEEEEEEEecCC-CCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCccccccee
Q 011738 62 HYAGYVTVNEHNGRALFYWFYEAMTR-PQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANML 140 (478)
Q Consensus 62 ~~sGy~~~~~~~~~~lfy~f~es~~~-~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l 140 (478)
.-.||+++.. ++|+|||+|.+..+ ...+|+.|||+||||+||.++|+|.|.||...+ +++|+.+|.+.|+|+
T Consensus 3 ~~wg~v~vr~--~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~-----~~~r~~TWlk~adll 75 (414)
T KOG1283|consen 3 EDWGYVDVRT--GAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD-----GSPRDWTWLKDADLL 75 (414)
T ss_pred ccccceeeec--CceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC-----CCcCCchhhhhccEE
Confidence 3469999975 69999999988654 478999999999999999999999999999887 456999999999999
Q ss_pred eeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCcee
Q 011738 141 FLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYI 220 (478)
Q Consensus 141 ~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~i 220 (478)
|||.|||+||||.+..+.|.+ +.+++|.|+.+.|+.||..||+|+.+||||+-|||||+.++.+|..+.+.++.++.+.
T Consensus 76 fvDnPVGaGfSyVdg~~~Y~~-~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~ 154 (414)
T KOG1283|consen 76 FVDNPVGAGFSYVDGSSAYTT-NNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKL 154 (414)
T ss_pred EecCCCcCceeeecCcccccc-cHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceee
Confidence 999999999999998887877 8999999999999999999999999999999999999999999999999998888999
Q ss_pred eeeeeEecCCCCCchhhhhhhHHHhhhcccCCHHHHHHHHh---hcccCCCC---CCChHHHHHHHHHHHHHcCCCCccc
Q 011738 221 DLKGILLGNPETSTAEDWQGLVDYAWSHAVVSDETHKIILR---TCDFNSSD---PWSSDECSDAVAEVLKQYKEIDIYS 294 (478)
Q Consensus 221 nLkGi~IGng~~dp~~~~~~~~~~a~~~gli~~~~~~~~~~---~c~~~~~~---~~~~~~C~~~~~~~~~~~~~in~Yd 294 (478)
|+.|+++|++||+|...+.++.+|++..+++|+...+...+ .|...... ...+.......+.+...+.+++.||
T Consensus 155 nf~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~VdfYN 234 (414)
T KOG1283|consen 155 NFIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNGVDFYN 234 (414)
T ss_pred cceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccCcceee
Confidence 99999999999999999999999999999999988776654 34322110 1112222333344555667899999
Q ss_pred ccccCCCCCcc-hhhHHHH-hhcCCCCccccCCCC-CCchhHHHHhcCcHHHHhHcCCCCccccccccccccccccCCC-
Q 011738 295 IYTSVCSSNSL-ESSQLLM-KRTSKMMPRIMGGYD-PCLDNYAKAFYNRLDVQKALHVSDGHLLRNWSICNTTMYEGWP- 370 (478)
Q Consensus 295 i~~~~C~~~~~-~~~~~~~-~~~~~~~~~~~~~~~-pc~~~~~~~YLN~~~Vr~aL~v~~~~~~~~w~~cn~~v~~~~~- 370 (478)
|..+.-..... .++...+ +...| ++..... +-..+.+.++||-+ ||++|++.++ ...|...+..|+...+
T Consensus 235 il~~t~~d~~~~ss~~~~~~~~~~r---rl~~~~~~~~~~D~L~~lM~g~-vrkkLgIip~--~~~wGgqsg~vFt~lq~ 308 (414)
T KOG1283|consen 235 ILTKTLGDQYSLSSRAAMTPEEVMR---RLLVRFVGDEDRDKLSDLMNGP-VRKKLGIIPG--GVKWGGQSGDVFTKLQG 308 (414)
T ss_pred eeccCCCcchhhhhhhhcchHHHHH---HHHhccCcchhHHHHHHHhccc-ccccccccCC--CCcccCcCCchHHHhhh
Confidence 99764333221 1111000 00000 1100001 11125689999986 9999999875 3589999999988877
Q ss_pred CCCCChHHHHHHHHHcCCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccc--cc---eecCeeeEEEEEeCCeEEEEE
Q 011738 371 QPKPSVLPIYTKLIEAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWR--PW---YHQKQVGGWVQEYAGLTFVTV 445 (478)
Q Consensus 371 d~~~~~~~~l~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~--~w---~~~~~~~Gy~k~~~~ltf~~V 445 (478)
|+|++.+..+.+||+.|++|.||||+.|.||++.|+++|+..|.|+....++ +| +++-..+||.|+|.||.|..|
T Consensus 309 dFMKPvi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktyknl~f~wi 388 (414)
T KOG1283|consen 309 DFMKPVISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKNLSFFWI 388 (414)
T ss_pred hhcccHHHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhccceeEEe
Confidence 9999999999999999999999999999999999999999999999998654 44 345578999999999999999
Q ss_pred cCCcccccCCChHHHHHHHHHHHc
Q 011738 446 RGAGHAVPVFKPSDSLALFSSFLL 469 (478)
Q Consensus 446 ~~AGHmvP~dqP~~a~~mi~~fl~ 469 (478)
..||||||.|+|+.|.+|++.+.+
T Consensus 389 lraghmvp~Dnp~~a~hmlr~vtk 412 (414)
T KOG1283|consen 389 LRAGHMVPADNPAAASHMLRHVTK 412 (414)
T ss_pred ecccCcccCCCHHHHhhheeeccc
Confidence 999999999999999999987654
No 9
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.46 E-value=6.3e-12 Score=121.93 Aligned_cols=130 Identities=23% Similarity=0.321 Sum_probs=83.0
Q ss_pred EeEEEeecCCCceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeec
Q 011738 64 AGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLE 143 (478)
Q Consensus 64 sGy~~~~~~~~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD 143 (478)
.++++++. ..+.|.-+. .+...|.||+++||||+++..+..+.+ .+. + +..+++.+|
T Consensus 4 ~~~~~~~~---~~~~~~~~~---~~~~~~~vl~~hG~~g~~~~~~~~~~~-----------~l~-~-----~g~~vi~~d 60 (288)
T TIGR01250 4 EGIITVDG---GYHLFTKTG---GEGEKIKLLLLHGGPGMSHEYLENLRE-----------LLK-E-----EGREVIMYD 60 (288)
T ss_pred cceecCCC---CeEEEEecc---CCCCCCeEEEEcCCCCccHHHHHHHHH-----------HHH-h-----cCCEEEEEc
Confidence 45666542 445554332 233468899999999987651233221 111 1 247899999
Q ss_pred cCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeee
Q 011738 144 SPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLK 223 (478)
Q Consensus 144 ~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLk 223 (478)
.| |.|.|........ ..+.+..++++..+++. +..++++|+|+|+||..+..+|..- +..++
T Consensus 61 ~~-G~G~s~~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~~~liG~S~Gg~ia~~~a~~~---------p~~v~ 122 (288)
T TIGR01250 61 QL-GCGYSDQPDDSDE-LWTIDYFVDELEEVREK-------LGLDKFYLLGHSWGGMLAQEYALKY---------GQHLK 122 (288)
T ss_pred CC-CCCCCCCCCcccc-cccHHHHHHHHHHHHHH-------cCCCcEEEEEeehHHHHHHHHHHhC---------ccccc
Confidence 99 9999964322210 12567777776665542 3345799999999999999888753 23388
Q ss_pred eeEecCCCCCc
Q 011738 224 GILLGNPETST 234 (478)
Q Consensus 224 Gi~IGng~~dp 234 (478)
++++.++....
T Consensus 123 ~lvl~~~~~~~ 133 (288)
T TIGR01250 123 GLIISSMLDSA 133 (288)
T ss_pred eeeEecccccc
Confidence 99998876543
No 10
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.45 E-value=1e-11 Score=123.34 Aligned_cols=141 Identities=18% Similarity=0.215 Sum_probs=94.6
Q ss_pred CCcceecCCCCCCCCceeEEeEEEeecCCCc--eEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCC
Q 011738 45 NEDLVTNLPGQPNVDFRHYAGYVTVNEHNGR--ALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTD 122 (478)
Q Consensus 45 ~~~~~~~l~g~~~~~~~~~sGy~~~~~~~~~--~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~ 122 (478)
.+.+++++|.+ +..-.|+.++...+. +++|.-. .++ +.|.||+++|.|+.+.. +..+.+
T Consensus 7 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~y~~~---G~~-~~~~lvliHG~~~~~~~-w~~~~~--------- 67 (302)
T PRK00870 7 PDSRFENLPDY-----PFAPHYVDVDDGDGGPLRMHYVDE---GPA-DGPPVLLLHGEPSWSYL-YRKMIP--------- 67 (302)
T ss_pred CcccccCCcCC-----CCCceeEeecCCCCceEEEEEEec---CCC-CCCEEEEECCCCCchhh-HHHHHH---------
Confidence 44667888865 345678888763333 5776632 223 46889999999887777 554431
Q ss_pred CCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccch
Q 011738 123 GRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYI 202 (478)
Q Consensus 123 ~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yv 202 (478)
.|. .+.++++.+|.| |.|.|-...... ..+.++.++++.++|+. +...+++|+|||+||..+
T Consensus 68 --~L~------~~gy~vi~~Dl~-G~G~S~~~~~~~--~~~~~~~a~~l~~~l~~-------l~~~~v~lvGhS~Gg~ia 129 (302)
T PRK00870 68 --ILA------AAGHRVIAPDLI-GFGRSDKPTRRE--DYTYARHVEWMRSWFEQ-------LDLTDVTLVCQDWGGLIG 129 (302)
T ss_pred --HHH------hCCCEEEEECCC-CCCCCCCCCCcc--cCCHHHHHHHHHHHHHH-------cCCCCEEEEEEChHHHHH
Confidence 111 124799999999 999994321111 12566777777766652 334689999999999998
Q ss_pred HHHHHHHHHhcCCCCceeeeeeeEecCCC
Q 011738 203 PELTELIHDRNKDPSLYIDLKGILLGNPE 231 (478)
Q Consensus 203 p~la~~i~~~n~~~~~~inLkGi~IGng~ 231 (478)
-.+|.+-.+. ++++++.++.
T Consensus 130 ~~~a~~~p~~---------v~~lvl~~~~ 149 (302)
T PRK00870 130 LRLAAEHPDR---------FARLVVANTG 149 (302)
T ss_pred HHHHHhChhh---------eeEEEEeCCC
Confidence 8888764333 8899988764
No 11
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.43 E-value=2.5e-12 Score=122.89 Aligned_cols=116 Identities=17% Similarity=0.212 Sum_probs=81.4
Q ss_pred EEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCC
Q 011738 78 FYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTN 157 (478)
Q Consensus 78 fy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~ 157 (478)
+|..+.. ..++.|+||+++|.+|.+.. +..+.+ . +.+.++++.+|.| |.|.|......
T Consensus 2 ~~~~~~~--~~~~~~~iv~lhG~~~~~~~-~~~~~~-----------~-------l~~~~~vi~~D~~-G~G~S~~~~~~ 59 (257)
T TIGR03611 2 HYELHGP--PDADAPVVVLSSGLGGSGSY-WAPQLD-----------V-------LTQRFHVVTYDHR-GTGRSPGELPP 59 (257)
T ss_pred EEEEecC--CCCCCCEEEEEcCCCcchhH-HHHHHH-----------H-------HHhccEEEEEcCC-CCCCCCCCCcc
Confidence 4555432 22467999999999887766 543331 1 1235799999999 99999643322
Q ss_pred CCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 158 DYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 158 ~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
. .+.++.++++.+++.. +...+++|+|+|+||..+..+|.+..+. ++++++.+|+..+
T Consensus 60 ~---~~~~~~~~~~~~~i~~-------~~~~~~~l~G~S~Gg~~a~~~a~~~~~~---------v~~~i~~~~~~~~ 117 (257)
T TIGR03611 60 G---YSIAHMADDVLQLLDA-------LNIERFHFVGHALGGLIGLQLALRYPER---------LLSLVLINAWSRP 117 (257)
T ss_pred c---CCHHHHHHHHHHHHHH-------hCCCcEEEEEechhHHHHHHHHHHChHH---------hHHheeecCCCCC
Confidence 2 2667777777777753 2345799999999999999988765433 8999998887655
No 12
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.39 E-value=1.3e-11 Score=121.99 Aligned_cols=123 Identities=12% Similarity=0.100 Sum_probs=86.7
Q ss_pred EEEeecCCCceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccC
Q 011738 66 YVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESP 145 (478)
Q Consensus 66 y~~~~~~~~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~P 145 (478)
|++++ +.+++|.- ..+ ..|.||+++|.++++.. +..+.+ . +.+.++++.+|.|
T Consensus 12 ~~~~~---~~~i~y~~----~G~-~~~~vlllHG~~~~~~~-w~~~~~-----------~-------L~~~~~vi~~Dlp 64 (294)
T PLN02824 12 TWRWK---GYNIRYQR----AGT-SGPALVLVHGFGGNADH-WRKNTP-----------V-------LAKSHRVYAIDLL 64 (294)
T ss_pred eEEEc---CeEEEEEE----cCC-CCCeEEEECCCCCChhH-HHHHHH-----------H-------HHhCCeEEEEcCC
Confidence 66664 35666652 122 23789999999998888 765542 1 2345699999999
Q ss_pred CCcccCCccCCCCC---cccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeee
Q 011738 146 IGVGFSYSNTTNDY---EMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDL 222 (478)
Q Consensus 146 vG~GfSy~~~~~~~---~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inL 222 (478)
|.|.|........ ..++.++.|+++.++|++. ...+++|+|+|+||..+-.+|.+-.+. +
T Consensus 65 -G~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p~~---------v 127 (294)
T PLN02824 65 -GYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAPEL---------V 127 (294)
T ss_pred -CCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhChhh---------e
Confidence 9999964322110 1126777888888877743 346899999999999998888765443 9
Q ss_pred eeeEecCCCC
Q 011738 223 KGILLGNPET 232 (478)
Q Consensus 223 kGi~IGng~~ 232 (478)
+++++.|+..
T Consensus 128 ~~lili~~~~ 137 (294)
T PLN02824 128 RGVMLINISL 137 (294)
T ss_pred eEEEEECCCc
Confidence 9999998864
No 13
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.36 E-value=3.6e-11 Score=116.91 Aligned_cols=109 Identities=16% Similarity=0.102 Sum_probs=76.8
Q ss_pred CCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccChHH
Q 011738 87 RPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDF 166 (478)
Q Consensus 87 ~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~ 166 (478)
.+.+.|+||+++|.+|.+.. +..+.+ .+ .+.++++.+|.| |.|.|....... .+.+.
T Consensus 24 g~~~~~~vv~~hG~~~~~~~-~~~~~~-----------~l-------~~~~~vi~~D~~-G~G~S~~~~~~~---~~~~~ 80 (278)
T TIGR03056 24 GPTAGPLLLLLHGTGASTHS-WRDLMP-----------PL-------ARSFRVVAPDLP-GHGFTRAPFRFR---FTLPS 80 (278)
T ss_pred CCCCCCeEEEEcCCCCCHHH-HHHHHH-----------HH-------hhCcEEEeecCC-CCCCCCCccccC---CCHHH
Confidence 34456899999999887666 544331 12 234799999999 999996433212 26777
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 167 TANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 167 ~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
.++++.++++. +..++++|+|+|+||..+..+|.+.. -.++++++.++..++
T Consensus 81 ~~~~l~~~i~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~p---------~~v~~~v~~~~~~~~ 132 (278)
T TIGR03056 81 MAEDLSALCAA-------EGLSPDGVIGHSAGAAIALRLALDGP---------VTPRMVVGINAALMP 132 (278)
T ss_pred HHHHHHHHHHH-------cCCCCceEEEECccHHHHHHHHHhCC---------cccceEEEEcCcccc
Confidence 78887777753 23458999999999988887776432 237899998887654
No 14
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.36 E-value=1.4e-11 Score=118.64 Aligned_cols=104 Identities=16% Similarity=0.228 Sum_probs=78.7
Q ss_pred CCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccChH
Q 011738 86 TRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDD 165 (478)
Q Consensus 86 ~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~ 165 (478)
..+.+.|.||+++|.+|.+.. +..+.+ . +.+.++++.+|.| |.|.|.... . .+.+
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~-~~~~~~-----------~-------l~~~~~vi~~D~~-G~G~s~~~~--~---~~~~ 65 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDN-LGVLAR-----------D-------LVNDHDIIQVDMR-NHGLSPRDP--V---MNYP 65 (255)
T ss_pred CCCCCCCCEEEECCCCCchhH-HHHHHH-----------H-------HhhCCeEEEECCC-CCCCCCCCC--C---CCHH
Confidence 456678999999999998877 654442 1 2345799999999 999996432 2 2677
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 011738 166 FTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNP 230 (478)
Q Consensus 166 ~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng 230 (478)
+.++|+.++|..+ ...+++|+|+|+||..+..+|.+..++ ++++++.++
T Consensus 66 ~~~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~~~~---------v~~lvli~~ 114 (255)
T PRK10673 66 AMAQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALAPDR---------IDKLVAIDI 114 (255)
T ss_pred HHHHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhCHhh---------cceEEEEec
Confidence 8888988888742 345799999999999999998775444 888888764
No 15
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.35 E-value=2.7e-11 Score=119.59 Aligned_cols=123 Identities=16% Similarity=0.164 Sum_probs=78.8
Q ss_pred eEEeEEEeecCCCceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceee
Q 011738 62 HYAGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLF 141 (478)
Q Consensus 62 ~~sGy~~~~~~~~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~ 141 (478)
..+.+++++ +..++|.- . . ..|.||+++|.|..+.. +-.+.+ .+.+.++++.
T Consensus 14 ~~~~~~~~~---~~~i~y~~---~-G--~~~~iv~lHG~~~~~~~-~~~~~~------------------~l~~~~~vi~ 65 (286)
T PRK03204 14 FESRWFDSS---RGRIHYID---E-G--TGPPILLCHGNPTWSFL-YRDIIV------------------ALRDRFRCVA 65 (286)
T ss_pred ccceEEEcC---CcEEEEEE---C-C--CCCEEEEECCCCccHHH-HHHHHH------------------HHhCCcEEEE
Confidence 345678775 35566552 1 2 34789999999865544 433221 1234579999
Q ss_pred eccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceee
Q 011738 142 LESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYID 221 (478)
Q Consensus 142 iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~in 221 (478)
+|.| |.|.|-.....+ .+.+..++++..+++. +...+++|+|||+||..+-.+|.+-. -.
T Consensus 66 ~D~~-G~G~S~~~~~~~---~~~~~~~~~~~~~~~~-------~~~~~~~lvG~S~Gg~va~~~a~~~p---------~~ 125 (286)
T PRK03204 66 PDYL-GFGLSERPSGFG---YQIDEHARVIGEFVDH-------LGLDRYLSMGQDWGGPISMAVAVERA---------DR 125 (286)
T ss_pred ECCC-CCCCCCCCCccc---cCHHHHHHHHHHHHHH-------hCCCCEEEEEECccHHHHHHHHHhCh---------hh
Confidence 9999 999995322111 1556666666655543 23467999999999987666665432 23
Q ss_pred eeeeEecCCCC
Q 011738 222 LKGILLGNPET 232 (478)
Q Consensus 222 LkGi~IGng~~ 232 (478)
+++++++++..
T Consensus 126 v~~lvl~~~~~ 136 (286)
T PRK03204 126 VRGVVLGNTWF 136 (286)
T ss_pred eeEEEEECccc
Confidence 99999988754
No 16
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.30 E-value=2.3e-10 Score=111.97 Aligned_cols=61 Identities=18% Similarity=0.099 Sum_probs=53.3
Q ss_pred HcCCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCcccccCCChHHHHHHH
Q 011738 385 EAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHAVPVFKPSDSLALF 464 (478)
Q Consensus 385 ~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHmvP~dqP~~a~~mi 464 (478)
+-.++||+..|..|.+++...++.+.+.+. +.+++.|.+|||+++.++|+...++|
T Consensus 221 ~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~------------------------~~~~~~i~~agH~~~~e~p~~~~~~i 276 (282)
T TIGR03343 221 EIKAKTLVTWGRDDRFVPLDHGLKLLWNMP------------------------DAQLHVFSRCGHWAQWEHADAFNRLV 276 (282)
T ss_pred hCCCCEEEEEccCCCcCCchhHHHHHHhCC------------------------CCEEEEeCCCCcCCcccCHHHHHHHH
Confidence 346899999999999999877777766654 67789999999999999999999999
Q ss_pred HHHHc
Q 011738 465 SSFLL 469 (478)
Q Consensus 465 ~~fl~ 469 (478)
.+|+.
T Consensus 277 ~~fl~ 281 (282)
T TIGR03343 277 IDFLR 281 (282)
T ss_pred HHHhh
Confidence 99985
No 17
>PHA02857 monoglyceride lipase; Provisional
Probab=99.28 E-value=1.3e-10 Score=113.67 Aligned_cols=125 Identities=13% Similarity=0.106 Sum_probs=84.9
Q ss_pred CCceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCccc-ccceeeeccCCCcccC
Q 011738 73 NGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNK-EANMLFLESPIGVGFS 151 (478)
Q Consensus 73 ~~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~-~~~~l~iD~PvG~GfS 151 (478)
.|..|+|.+++.. +..+|+||.++|..++|.. +-.+.+ .+.+ -.+++.+|.| |.|.|
T Consensus 9 ~g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~-~~~~~~------------------~l~~~g~~via~D~~-G~G~S 66 (276)
T PHA02857 9 DNDYIYCKYWKPI--TYPKALVFISHGAGEHSGR-YEELAE------------------NISSLGILVFSHDHI-GHGRS 66 (276)
T ss_pred CCCEEEEEeccCC--CCCCEEEEEeCCCccccch-HHHHHH------------------HHHhCCCEEEEccCC-CCCCC
Confidence 3578999888764 3445889989999777666 544431 1233 3689999999 99999
Q ss_pred CccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCC
Q 011738 152 YSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (478)
Q Consensus 152 y~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 231 (478)
-.... .. .+.....+|+.+++..+-+.++ ..+++|+|+|+||..+..+|.+- +-.++|+++.+|.
T Consensus 67 ~~~~~-~~--~~~~~~~~d~~~~l~~~~~~~~---~~~~~lvG~S~GG~ia~~~a~~~---------p~~i~~lil~~p~ 131 (276)
T PHA02857 67 NGEKM-MI--DDFGVYVRDVVQHVVTIKSTYP---GVPVFLLGHSMGATISILAAYKN---------PNLFTAMILMSPL 131 (276)
T ss_pred CCccC-Cc--CCHHHHHHHHHHHHHHHHhhCC---CCCEEEEEcCchHHHHHHHHHhC---------ccccceEEEeccc
Confidence 54321 11 1344556777777765544343 57899999999998777666542 2238999999987
Q ss_pred CCc
Q 011738 232 TST 234 (478)
Q Consensus 232 ~dp 234 (478)
+++
T Consensus 132 ~~~ 134 (276)
T PHA02857 132 VNA 134 (276)
T ss_pred ccc
Confidence 653
No 18
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.26 E-value=4.1e-11 Score=111.37 Aligned_cols=104 Identities=23% Similarity=0.325 Sum_probs=76.0
Q ss_pred eEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccChHHHHHHHHH
Q 011738 94 VLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYT 173 (478)
Q Consensus 94 ~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~ 173 (478)
||+++|++|.+.. +..+.+ .+ .+..+++.+|.| |.|.|..... ....+.++.++++.+
T Consensus 1 vv~~hG~~~~~~~-~~~~~~-----------~l-------~~~~~v~~~d~~-G~G~s~~~~~--~~~~~~~~~~~~l~~ 58 (228)
T PF12697_consen 1 VVFLHGFGGSSES-WDPLAE-----------AL-------ARGYRVIAFDLP-GHGRSDPPPD--YSPYSIEDYAEDLAE 58 (228)
T ss_dssp EEEE-STTTTGGG-GHHHHH-----------HH-------HTTSEEEEEECT-TSTTSSSHSS--GSGGSHHHHHHHHHH
T ss_pred eEEECCCCCCHHH-HHHHHH-----------HH-------hCCCEEEEEecC-Cccccccccc--cCCcchhhhhhhhhh
Confidence 6899999998877 655542 12 256789999999 9999965432 111266777777777
Q ss_pred HHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCch
Q 011738 174 FLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (478)
Q Consensus 174 ~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~ 235 (478)
+|+. +...+++|+|+|+||..+..+|.+..+ .++|+++.++.....
T Consensus 59 ~l~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~p~---------~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 59 LLDA-------LGIKKVILVGHSMGGMIALRLAARYPD---------RVKGLVLLSPPPPLP 104 (228)
T ss_dssp HHHH-------TTTSSEEEEEETHHHHHHHHHHHHSGG---------GEEEEEEESESSSHH
T ss_pred cccc-------ccccccccccccccccccccccccccc---------ccccceeeccccccc
Confidence 7763 223689999999999999988876433 399999999988654
No 19
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.24 E-value=3.6e-10 Score=106.92 Aligned_cols=103 Identities=17% Similarity=0.228 Sum_probs=70.2
Q ss_pred CCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccChHHHH
Q 011738 89 QEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTA 168 (478)
Q Consensus 89 ~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a 168 (478)
..+|++|+++|-++.+.. +..+.| . ..+.++++.+|.| |.|.|.... .. .+.++.+
T Consensus 11 ~~~~~li~~hg~~~~~~~-~~~~~~-----------~-------l~~~~~v~~~d~~-G~G~s~~~~-~~---~~~~~~~ 66 (251)
T TIGR02427 11 DGAPVLVFINSLGTDLRM-WDPVLP-----------A-------LTPDFRVLRYDKR-GHGLSDAPE-GP---YSIEDLA 66 (251)
T ss_pred CCCCeEEEEcCcccchhh-HHHHHH-----------H-------hhcccEEEEecCC-CCCCCCCCC-CC---CCHHHHH
Confidence 367999999986555554 443332 1 1235799999999 999984322 12 2667778
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCC
Q 011738 169 NDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (478)
Q Consensus 169 ~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 231 (478)
+++.++++.+ ...+++|+|+|+||..+..+|.+-.+. ++++++.++.
T Consensus 67 ~~~~~~i~~~-------~~~~v~liG~S~Gg~~a~~~a~~~p~~---------v~~li~~~~~ 113 (251)
T TIGR02427 67 DDVLALLDHL-------GIERAVFCGLSLGGLIAQGLAARRPDR---------VRALVLSNTA 113 (251)
T ss_pred HHHHHHHHHh-------CCCceEEEEeCchHHHHHHHHHHCHHH---------hHHHhhccCc
Confidence 8877777632 245799999999999888888764333 7777776654
No 20
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.23 E-value=4e-10 Score=115.02 Aligned_cols=127 Identities=15% Similarity=0.094 Sum_probs=81.2
Q ss_pred EeEEEeecCCCc-eEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeee
Q 011738 64 AGYVTVNEHNGR-ALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFL 142 (478)
Q Consensus 64 sGy~~~~~~~~~-~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~i 142 (478)
..++... +. +++|.-..+.....+.|.||.++|.++.+.. |..+.+ ...+..+++.+
T Consensus 63 ~~~~~~~---g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~-w~~~~~------------------~L~~~~~via~ 120 (360)
T PLN02679 63 CKKWKWK---GEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPH-WRRNIG------------------VLAKNYTVYAI 120 (360)
T ss_pred CceEEEC---CceeEEEEEecCcccCCCCCeEEEECCCCCCHHH-HHHHHH------------------HHhcCCEEEEE
Confidence 4455543 23 6776643211001144789999999888777 654431 12345799999
Q ss_pred ccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHH-HHhcCCCCceee
Q 011738 143 ESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELI-HDRNKDPSLYID 221 (478)
Q Consensus 143 D~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i-~~~n~~~~~~in 221 (478)
|.| |.|.|-...... ++.+..++++.++|+. +...+++|+|+|+||..+..+|.+- .+ .
T Consensus 121 Dl~-G~G~S~~~~~~~---~~~~~~a~~l~~~l~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~~P~---------r 180 (360)
T PLN02679 121 DLL-GFGASDKPPGFS---YTMETWAELILDFLEE-------VVQKPTVLIGNSVGSLACVIAASESTRD---------L 180 (360)
T ss_pred CCC-CCCCCCCCCCcc---ccHHHHHHHHHHHHHH-------hcCCCeEEEEECHHHHHHHHHHHhcChh---------h
Confidence 999 999995432212 2667788888887763 2245899999999997665555421 22 2
Q ss_pred eeeeEecCCCC
Q 011738 222 LKGILLGNPET 232 (478)
Q Consensus 222 LkGi~IGng~~ 232 (478)
++|+++.|+..
T Consensus 181 V~~LVLi~~~~ 191 (360)
T PLN02679 181 VRGLVLLNCAG 191 (360)
T ss_pred cCEEEEECCcc
Confidence 89999988753
No 21
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.23 E-value=4.5e-10 Score=111.07 Aligned_cols=115 Identities=16% Similarity=0.141 Sum_probs=83.2
Q ss_pred CceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCc
Q 011738 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYS 153 (478)
Q Consensus 74 ~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~ 153 (478)
+..++|.-. . +.|.||+++|.|+.+.. +..+.+ . +.+...++-+|.| |.|.|..
T Consensus 16 g~~i~y~~~----G--~g~~vvllHG~~~~~~~-w~~~~~-----------~-------L~~~~~via~D~~-G~G~S~~ 69 (295)
T PRK03592 16 GSRMAYIET----G--EGDPIVFLHGNPTSSYL-WRNIIP-----------H-------LAGLGRCLAPDLI-GMGASDK 69 (295)
T ss_pred CEEEEEEEe----C--CCCEEEEECCCCCCHHH-HHHHHH-----------H-------HhhCCEEEEEcCC-CCCCCCC
Confidence 356776632 1 34889999999988887 654431 1 2334599999999 9999954
Q ss_pred cCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCC
Q 011738 154 NTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETS 233 (478)
Q Consensus 154 ~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d 233 (478)
.. .. ++.+..|+++..+++. +...+++|+|+|+||..+-.+|.+..+. ++++++.|+...
T Consensus 70 ~~-~~---~~~~~~a~dl~~ll~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~p~~---------v~~lil~~~~~~ 129 (295)
T PRK03592 70 PD-ID---YTFADHARYLDAWFDA-------LGLDDVVLVGHDWGSALGFDWAARHPDR---------VRGIAFMEAIVR 129 (295)
T ss_pred CC-CC---CCHHHHHHHHHHHHHH-------hCCCCeEEEEECHHHHHHHHHHHhChhh---------eeEEEEECCCCC
Confidence 32 22 2677778887777764 3346899999999999888888765444 999999998655
Q ss_pred c
Q 011738 234 T 234 (478)
Q Consensus 234 p 234 (478)
+
T Consensus 130 ~ 130 (295)
T PRK03592 130 P 130 (295)
T ss_pred C
Confidence 4
No 22
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.23 E-value=4.4e-10 Score=115.11 Aligned_cols=133 Identities=15% Similarity=0.140 Sum_probs=86.9
Q ss_pred CceeEEeEEEeecCCCceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccc
Q 011738 59 DFRHYAGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEAN 138 (478)
Q Consensus 59 ~~~~~sGy~~~~~~~~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~ 138 (478)
..++-+|+.... .+-.+||. +..+...|.||.++|.|+.+.. +-.+.+ . +.+..+
T Consensus 101 ~~~~~~~~~~~~--~~~~~~y~----~~G~~~~~~ivllHG~~~~~~~-w~~~~~-----------~-------L~~~~~ 155 (383)
T PLN03084 101 GLKMGAQSQASS--DLFRWFCV----ESGSNNNPPVLLIHGFPSQAYS-YRKVLP-----------V-------LSKNYH 155 (383)
T ss_pred cccccceeEEcC--CceEEEEE----ecCCCCCCeEEEECCCCCCHHH-HHHHHH-----------H-------HhcCCE
Confidence 344555555532 24556655 2334456899999999887766 544431 1 233579
Q ss_pred eeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCc
Q 011738 139 MLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSL 218 (478)
Q Consensus 139 ~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~ 218 (478)
++.+|.| |.|+|.......-..++.++.++++..+++. +...+++|+|+|+||..+-.+|.+-.+
T Consensus 156 Via~Dlp-G~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~-------l~~~~~~LvG~s~GG~ia~~~a~~~P~------- 220 (383)
T PLN03084 156 AIAFDWL-GFGFSDKPQPGYGFNYTLDEYVSSLESLIDE-------LKSDKVSLVVQGYFSPPVVKYASAHPD------- 220 (383)
T ss_pred EEEECCC-CCCCCCCCcccccccCCHHHHHHHHHHHHHH-------hCCCCceEEEECHHHHHHHHHHHhChH-------
Confidence 9999999 9999965432100112677778888877764 234579999999999766666654333
Q ss_pred eeeeeeeEecCCCCC
Q 011738 219 YIDLKGILLGNPETS 233 (478)
Q Consensus 219 ~inLkGi~IGng~~d 233 (478)
.++++++.|+...
T Consensus 221 --~v~~lILi~~~~~ 233 (383)
T PLN03084 221 --KIKKLILLNPPLT 233 (383)
T ss_pred --hhcEEEEECCCCc
Confidence 2999999998643
No 23
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.21 E-value=7.3e-10 Score=108.22 Aligned_cols=137 Identities=15% Similarity=0.184 Sum_probs=95.5
Q ss_pred CceeEEeEEEeecCCCceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccc
Q 011738 59 DFRHYAGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEAN 138 (478)
Q Consensus 59 ~~~~~sGy~~~~~~~~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~ 138 (478)
+++..+-|+.+.+. ... |.++-...+++.+.++.+||= |++.+ +|. .|=.+..+..|
T Consensus 62 ~v~~~~~~v~i~~~--~~i--w~~~~~~~~~~~~plVliHGy-GAg~g---~f~---------------~Nf~~La~~~~ 118 (365)
T KOG4409|consen 62 PVPYSKKYVRIPNG--IEI--WTITVSNESANKTPLVLIHGY-GAGLG---LFF---------------RNFDDLAKIRN 118 (365)
T ss_pred CCCcceeeeecCCC--cee--EEEeecccccCCCcEEEEecc-chhHH---HHH---------------HhhhhhhhcCc
Confidence 34455677777632 222 333334445778888889984 54433 232 35555666889
Q ss_pred eeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCc
Q 011738 139 MLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSL 218 (478)
Q Consensus 139 ~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~ 218 (478)
+..||+| |.|+|--..- .. +.+.+-+.+.+-+++|..... =.+.+|+|||+||..+...|.+-.++
T Consensus 119 vyaiDll-G~G~SSRP~F---~~-d~~~~e~~fvesiE~WR~~~~---L~KmilvGHSfGGYLaa~YAlKyPer------ 184 (365)
T KOG4409|consen 119 VYAIDLL-GFGRSSRPKF---SI-DPTTAEKEFVESIEQWRKKMG---LEKMILVGHSFGGYLAAKYALKYPER------ 184 (365)
T ss_pred eEEeccc-CCCCCCCCCC---CC-CcccchHHHHHHHHHHHHHcC---CcceeEeeccchHHHHHHHHHhChHh------
Confidence 9999999 9999954322 21 344445588899999998664 45899999999999988888887776
Q ss_pred eeeeeeeEecCCCCCch
Q 011738 219 YIDLKGILLGNPETSTA 235 (478)
Q Consensus 219 ~inLkGi~IGng~~dp~ 235 (478)
++-++|.+||--|.
T Consensus 185 ---V~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 185 ---VEKLILVSPWGFPE 198 (365)
T ss_pred ---hceEEEeccccccc
Confidence 88899999997665
No 24
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.20 E-value=2.6e-10 Score=111.78 Aligned_cols=117 Identities=16% Similarity=0.159 Sum_probs=81.4
Q ss_pred CceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCc
Q 011738 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYS 153 (478)
Q Consensus 74 ~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~ 153 (478)
+..+.|+..+- ....|.||+++|-++.+.. +..+.+ . ..+..+++.+|.| |.|.|-.
T Consensus 11 ~~~~~~~~~~~---~~~~~plvllHG~~~~~~~-w~~~~~-----------~-------L~~~~~vi~~Dl~-G~G~S~~ 67 (276)
T TIGR02240 11 GQSIRTAVRPG---KEGLTPLLIFNGIGANLEL-VFPFIE-----------A-------LDPDLEVIAFDVP-GVGGSST 67 (276)
T ss_pred CcEEEEEEecC---CCCCCcEEEEeCCCcchHH-HHHHHH-----------H-------hccCceEEEECCC-CCCCCCC
Confidence 45688876431 2345788999997666666 544331 1 1345799999999 9999953
Q ss_pred cCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCC
Q 011738 154 NTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETS 233 (478)
Q Consensus 154 ~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d 233 (478)
.. ..+ +.+..++++.++++. +.-.+++|+|+|+||..+-.+|.+-.+. ++++++.|+...
T Consensus 68 ~~-~~~---~~~~~~~~~~~~i~~-------l~~~~~~LvG~S~GG~va~~~a~~~p~~---------v~~lvl~~~~~~ 127 (276)
T TIGR02240 68 PR-HPY---RFPGLAKLAARMLDY-------LDYGQVNAIGVSWGGALAQQFAHDYPER---------CKKLILAATAAG 127 (276)
T ss_pred CC-CcC---cHHHHHHHHHHHHHH-------hCcCceEEEEECHHHHHHHHHHHHCHHH---------hhheEEeccCCc
Confidence 22 221 556667777666664 2245899999999999888888765443 999999998764
No 25
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.18 E-value=5e-10 Score=113.76 Aligned_cols=128 Identities=16% Similarity=0.177 Sum_probs=83.3
Q ss_pred CCceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCccc-ccceeeeccCCCcccC
Q 011738 73 NGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNK-EANMLFLESPIGVGFS 151 (478)
Q Consensus 73 ~~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~-~~~~l~iD~PvG~GfS 151 (478)
.|..+|+..+...+ ...+|+||++||..+.++..+-.+. ..+.+ -.+++-+|.| |.|.|
T Consensus 70 ~g~~l~~~~~~p~~-~~~~~~iv~lHG~~~~~~~~~~~~~------------------~~l~~~g~~v~~~D~~-G~G~S 129 (349)
T PLN02385 70 RGVEIFSKSWLPEN-SRPKAAVCFCHGYGDTCTFFFEGIA------------------RKIASSGYGVFAMDYP-GFGLS 129 (349)
T ss_pred CCCEEEEEEEecCC-CCCCeEEEEECCCCCccchHHHHHH------------------HHHHhCCCEEEEecCC-CCCCC
Confidence 35678887664322 2456899999998665443111111 01222 4799999999 99999
Q ss_pred CccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCC
Q 011738 152 YSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (478)
Q Consensus 152 y~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 231 (478)
-... .+.. +.+..++|+.++++.. ...+++...+++|+|||+||..+..+|.+-. -.++|+++.+|.
T Consensus 130 ~~~~--~~~~-~~~~~~~dv~~~l~~l-~~~~~~~~~~~~LvGhSmGG~val~~a~~~p---------~~v~glVLi~p~ 196 (349)
T PLN02385 130 EGLH--GYIP-SFDDLVDDVIEHYSKI-KGNPEFRGLPSFLFGQSMGGAVALKVHLKQP---------NAWDGAILVAPM 196 (349)
T ss_pred CCCC--CCcC-CHHHHHHHHHHHHHHH-HhccccCCCCEEEEEeccchHHHHHHHHhCc---------chhhheeEeccc
Confidence 6432 2211 5667788888777653 2333454668999999999988777665432 238999999886
Q ss_pred CC
Q 011738 232 TS 233 (478)
Q Consensus 232 ~d 233 (478)
..
T Consensus 197 ~~ 198 (349)
T PLN02385 197 CK 198 (349)
T ss_pred cc
Confidence 53
No 26
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.16 E-value=6.4e-10 Score=111.95 Aligned_cols=140 Identities=16% Similarity=0.189 Sum_probs=87.9
Q ss_pred eeEEeEEEeecCCCceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCccc-ccce
Q 011738 61 RHYAGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNK-EANM 139 (478)
Q Consensus 61 ~~~sGy~~~~~~~~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~-~~~~ 139 (478)
+...+++... .+..++|..+.........|+||+++|..+.++..+-.+ -..+.+ -+++
T Consensus 31 ~~~~~~~~~~--dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~------------------~~~L~~~Gy~V 90 (330)
T PLN02298 31 KGSKSFFTSP--RGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQST------------------AIFLAQMGFAC 90 (330)
T ss_pred ccccceEEcC--CCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHH------------------HHHHHhCCCEE
Confidence 3446677664 357888875543222235689999999843322101000 011333 4799
Q ss_pred eeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCce
Q 011738 140 LFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLY 219 (478)
Q Consensus 140 l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~ 219 (478)
+.+|+| |.|.|.... .... +.+..++|+..+++..... .++...+++|+|+|+||..+..+|.+- +
T Consensus 91 ~~~D~r-GhG~S~~~~--~~~~-~~~~~~~D~~~~i~~l~~~-~~~~~~~i~l~GhSmGG~ia~~~a~~~---------p 156 (330)
T PLN02298 91 FALDLE-GHGRSEGLR--AYVP-NVDLVVEDCLSFFNSVKQR-EEFQGLPRFLYGESMGGAICLLIHLAN---------P 156 (330)
T ss_pred EEecCC-CCCCCCCcc--ccCC-CHHHHHHHHHHHHHHHHhc-ccCCCCCEEEEEecchhHHHHHHHhcC---------c
Confidence 999999 999995322 2212 5677888888888754432 223355899999999998777665432 2
Q ss_pred eeeeeeEecCCCCCc
Q 011738 220 IDLKGILLGNPETST 234 (478)
Q Consensus 220 inLkGi~IGng~~dp 234 (478)
-.++|+++.+++...
T Consensus 157 ~~v~~lvl~~~~~~~ 171 (330)
T PLN02298 157 EGFDGAVLVAPMCKI 171 (330)
T ss_pred ccceeEEEecccccC
Confidence 239999999887643
No 27
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.13 E-value=1.4e-09 Score=105.14 Aligned_cols=61 Identities=16% Similarity=0.080 Sum_probs=51.9
Q ss_pred HcCCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCcccccCCChHHHHHHH
Q 011738 385 EAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHAVPVFKPSDSLALF 464 (478)
Q Consensus 385 ~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHmvP~dqP~~a~~mi 464 (478)
+-.++|||.+|..|.++|....+...+.+. +..++++.++||+++.++|+...+.+
T Consensus 194 ~i~~P~lii~G~~D~~~~~~~~~~~~~~i~------------------------~~~~~~i~~~gH~~~~e~p~~f~~~l 249 (256)
T PRK10349 194 NVSMPFLRLYGYLDGLVPRKVVPMLDKLWP------------------------HSESYIFAKAAHAPFISHPAEFCHLL 249 (256)
T ss_pred hcCCCeEEEecCCCccCCHHHHHHHHHhCC------------------------CCeEEEeCCCCCCccccCHHHHHHHH
Confidence 346999999999999999877665555543 77889999999999999999999999
Q ss_pred HHHHc
Q 011738 465 SSFLL 469 (478)
Q Consensus 465 ~~fl~ 469 (478)
.+|-.
T Consensus 250 ~~~~~ 254 (256)
T PRK10349 250 VALKQ 254 (256)
T ss_pred HHHhc
Confidence 99864
No 28
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.13 E-value=3.2e-09 Score=105.82 Aligned_cols=126 Identities=17% Similarity=0.271 Sum_probs=82.2
Q ss_pred EeEEEeecCCCceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCc-ccccceeee
Q 011738 64 AGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAW-NKEANMLFL 142 (478)
Q Consensus 64 sGy~~~~~~~~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw-~~~~~~l~i 142 (478)
.+|+.+.+ +..++|.-. .+.+.|.||+++||||.++. ..... .| .+.++++.+
T Consensus 6 ~~~~~~~~--~~~l~y~~~----g~~~~~~lvllHG~~~~~~~-~~~~~-------------------~~~~~~~~vi~~ 59 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQS----GNPDGKPVVFLHGGPGSGTD-PGCRR-------------------FFDPETYRIVLF 59 (306)
T ss_pred CCeEEcCC--CcEEEEEEC----cCCCCCEEEEECCCCCCCCC-HHHHh-------------------ccCccCCEEEEE
Confidence 57888764 467888642 22234567999999997654 11110 11 145799999
Q ss_pred ccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeee
Q 011738 143 ESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDL 222 (478)
Q Consensus 143 D~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inL 222 (478)
|+| |.|.|..... ... .+.++.++++..+++ . +...+++++|+||||..+..+|.+-.+. +
T Consensus 60 D~~-G~G~S~~~~~-~~~-~~~~~~~~dl~~l~~----~---l~~~~~~lvG~S~GG~ia~~~a~~~p~~---------v 120 (306)
T TIGR01249 60 DQR-GCGKSTPHAC-LEE-NTTWDLVADIEKLRE----K---LGIKNWLVFGGSWGSTLALAYAQTHPEV---------V 120 (306)
T ss_pred CCC-CCCCCCCCCC-ccc-CCHHHHHHHHHHHHH----H---cCCCCEEEEEECHHHHHHHHHHHHChHh---------h
Confidence 999 9999964321 111 145566666655544 2 2245799999999999888888765443 8
Q ss_pred eeeEecCCCCCc
Q 011738 223 KGILLGNPETST 234 (478)
Q Consensus 223 kGi~IGng~~dp 234 (478)
+++++.+..+..
T Consensus 121 ~~lvl~~~~~~~ 132 (306)
T TIGR01249 121 TGLVLRGIFLLR 132 (306)
T ss_pred hhheeeccccCC
Confidence 888888877654
No 29
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.12 E-value=1.5e-09 Score=102.31 Aligned_cols=60 Identities=20% Similarity=0.135 Sum_probs=51.1
Q ss_pred HcCCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCcccccCCChHHHHHHH
Q 011738 385 EAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHAVPVFKPSDSLALF 464 (478)
Q Consensus 385 ~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHmvP~dqP~~a~~mi 464 (478)
+-..+|||.+|..|.+++....+.+.+.+. +-++..+.++||+++.++|+...+.+
T Consensus 186 ~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~e~p~~~~~~i 241 (245)
T TIGR01738 186 NISVPFLRLYGYLDGLVPAKVVPYLDKLAP------------------------HSELYIFAKAAHAPFLSHAEAFCALL 241 (245)
T ss_pred cCCCCEEEEeecCCcccCHHHHHHHHHhCC------------------------CCeEEEeCCCCCCccccCHHHHHHHH
Confidence 346899999999999999887776655543 55678899999999999999999999
Q ss_pred HHHH
Q 011738 465 SSFL 468 (478)
Q Consensus 465 ~~fl 468 (478)
.+||
T Consensus 242 ~~fi 245 (245)
T TIGR01738 242 VAFK 245 (245)
T ss_pred HhhC
Confidence 9986
No 30
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.12 E-value=1.6e-09 Score=103.57 Aligned_cols=100 Identities=19% Similarity=0.227 Sum_probs=71.8
Q ss_pred CCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccChHHHHHH
Q 011738 91 KPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTAND 170 (478)
Q Consensus 91 ~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~ 170 (478)
.|.||+++|.+|++.. +-.+.+ . . +.++++.+|.| |.|.|.... . . +.++.+++
T Consensus 2 ~p~vvllHG~~~~~~~-w~~~~~----------------~--l-~~~~vi~~D~~-G~G~S~~~~--~--~-~~~~~~~~ 55 (242)
T PRK11126 2 LPWLVFLHGLLGSGQD-WQPVGE----------------A--L-PDYPRLYIDLP-GHGGSAAIS--V--D-GFADVSRL 55 (242)
T ss_pred CCEEEEECCCCCChHH-HHHHHH----------------H--c-CCCCEEEecCC-CCCCCCCcc--c--c-CHHHHHHH
Confidence 5889999999998877 654431 1 1 24899999999 999995322 1 1 56677777
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCC
Q 011738 171 SYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (478)
Q Consensus 171 ~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 231 (478)
+.++|.. +...+++++|+|+||..+-.+|.+.... .++++++.++.
T Consensus 56 l~~~l~~-------~~~~~~~lvG~S~Gg~va~~~a~~~~~~--------~v~~lvl~~~~ 101 (242)
T PRK11126 56 LSQTLQS-------YNILPYWLVGYSLGGRIAMYYACQGLAG--------GLCGLIVEGGN 101 (242)
T ss_pred HHHHHHH-------cCCCCeEEEEECHHHHHHHHHHHhCCcc--------cccEEEEeCCC
Confidence 7777663 3356899999999998888888763111 18888887765
No 31
>PLN02578 hydrolase
Probab=99.08 E-value=3e-09 Score=108.35 Aligned_cols=112 Identities=14% Similarity=0.143 Sum_probs=76.6
Q ss_pred CceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCc
Q 011738 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYS 153 (478)
Q Consensus 74 ~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~ 153 (478)
+.+++|.-.+ +.|.||.++|-++.+.. +..+.+ . +.+..+++.+|.| |.|.|-.
T Consensus 75 ~~~i~Y~~~g------~g~~vvliHG~~~~~~~-w~~~~~-----------~-------l~~~~~v~~~D~~-G~G~S~~ 128 (354)
T PLN02578 75 GHKIHYVVQG------EGLPIVLIHGFGASAFH-WRYNIP-----------E-------LAKKYKVYALDLL-GFGWSDK 128 (354)
T ss_pred CEEEEEEEcC------CCCeEEEECCCCCCHHH-HHHHHH-----------H-------HhcCCEEEEECCC-CCCCCCC
Confidence 3567776321 23567899987665444 432221 1 2345899999999 9999854
Q ss_pred cCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCC
Q 011738 154 NTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (478)
Q Consensus 154 ~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 231 (478)
.. .. ++.+..++++.+|+++. ...+++|+|+|+||..+..+|.+..+. ++++++.|+.
T Consensus 129 ~~-~~---~~~~~~a~~l~~~i~~~-------~~~~~~lvG~S~Gg~ia~~~A~~~p~~---------v~~lvLv~~~ 186 (354)
T PLN02578 129 AL-IE---YDAMVWRDQVADFVKEV-------VKEPAVLVGNSLGGFTALSTAVGYPEL---------VAGVALLNSA 186 (354)
T ss_pred cc-cc---cCHHHHHHHHHHHHHHh-------ccCCeEEEEECHHHHHHHHHHHhChHh---------cceEEEECCC
Confidence 32 22 25666777887777643 246899999999999888888876554 8999998764
No 32
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.08 E-value=6.3e-09 Score=106.11 Aligned_cols=113 Identities=19% Similarity=0.177 Sum_probs=76.2
Q ss_pred ceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCcc
Q 011738 75 RALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSN 154 (478)
Q Consensus 75 ~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~ 154 (478)
..++|. +..+.+.|.+|++||.+|.+.. +..+.+ .+ .+..+++-+|.| |.|.|-..
T Consensus 119 ~~i~~~----~~g~~~~~~vl~~HG~~~~~~~-~~~~~~-----------~l-------~~~~~v~~~d~~-g~G~s~~~ 174 (371)
T PRK14875 119 RTVRYL----RLGEGDGTPVVLIHGFGGDLNN-WLFNHA-----------AL-------AAGRPVIALDLP-GHGASSKA 174 (371)
T ss_pred cEEEEe----cccCCCCCeEEEECCCCCccch-HHHHHH-----------HH-------hcCCEEEEEcCC-CCCCCCCC
Confidence 456554 2233456899999999888777 554442 11 223789999999 99998432
Q ss_pred CCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCC
Q 011738 155 TTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (478)
Q Consensus 155 ~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 231 (478)
... .+.++.++++..+++ ++...+++|.|+|+||..+..+|.+-.+ .++++++.++.
T Consensus 175 ~~~----~~~~~~~~~~~~~~~-------~~~~~~~~lvG~S~Gg~~a~~~a~~~~~---------~v~~lv~~~~~ 231 (371)
T PRK14875 175 VGA----GSLDELAAAVLAFLD-------ALGIERAHLVGHSMGGAVALRLAARAPQ---------RVASLTLIAPA 231 (371)
T ss_pred CCC----CCHHHHHHHHHHHHH-------hcCCccEEEEeechHHHHHHHHHHhCch---------heeEEEEECcC
Confidence 211 156666766666664 2334689999999999999888875322 27888877664
No 33
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.06 E-value=1.6e-08 Score=106.06 Aligned_cols=133 Identities=14% Similarity=0.128 Sum_probs=85.8
Q ss_pred eeEEeEEEeecCCCceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhh-hcccCCeEEcCCCCccccCCCCcccccce
Q 011738 61 RHYAGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGA-TQEIGPFLVDTDGRGLQFNPYAWNKEANM 139 (478)
Q Consensus 61 ~~~sGy~~~~~~~~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~-~~E~GP~~~~~~~~~~~~n~~sw~~~~~~ 139 (478)
+.-.-|+..++ ..+||+...... +...|.||++||.+|.++. +.. +.+ .+.. .+.+.+.+
T Consensus 175 ~~~~~~~~~~~---~~l~~~~~gp~~-~~~k~~VVLlHG~~~s~~~-W~~~~~~-----------~L~~---~~~~~yrV 235 (481)
T PLN03087 175 KFCTSWLSSSN---ESLFVHVQQPKD-NKAKEDVLFIHGFISSSAF-WTETLFP-----------NFSD---AAKSTYRL 235 (481)
T ss_pred ceeeeeEeeCC---eEEEEEEecCCC-CCCCCeEEEECCCCccHHH-HHHHHHH-----------HHHH---HhhCCCEE
Confidence 34456777653 578888654432 2234789999999988877 542 110 1111 23456799
Q ss_pred eeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCce
Q 011738 140 LFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLY 219 (478)
Q Consensus 140 l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~ 219 (478)
+.+|.| |.|.|-...... ++.++.++++.. .+.+. +...+++|+|+|+||..+-.+|.+-.+.
T Consensus 236 ia~Dl~-G~G~S~~p~~~~---ytl~~~a~~l~~---~ll~~---lg~~k~~LVGhSmGG~iAl~~A~~~Pe~------- 298 (481)
T PLN03087 236 FAVDLL-GFGRSPKPADSL---YTLREHLEMIER---SVLER---YKVKSFHIVAHSLGCILALALAVKHPGA------- 298 (481)
T ss_pred EEECCC-CCCCCcCCCCCc---CCHHHHHHHHHH---HHHHH---cCCCCEEEEEECHHHHHHHHHHHhChHh-------
Confidence 999999 999995332221 255566655531 23332 3356899999999999998888765443
Q ss_pred eeeeeeEecCCC
Q 011738 220 IDLKGILLGNPE 231 (478)
Q Consensus 220 inLkGi~IGng~ 231 (478)
++++++.++.
T Consensus 299 --V~~LVLi~~~ 308 (481)
T PLN03087 299 --VKSLTLLAPP 308 (481)
T ss_pred --ccEEEEECCC
Confidence 8899988763
No 34
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.04 E-value=9.2e-09 Score=106.49 Aligned_cols=109 Identities=13% Similarity=0.162 Sum_probs=71.9
Q ss_pred CCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccChHHHH
Q 011738 89 QEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTA 168 (478)
Q Consensus 89 ~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a 168 (478)
.+.|.||+++|.++.++. +.... ..+.+..+++.+|.| |.|.|-... ..+ . +.++..
T Consensus 103 ~~~p~vvllHG~~~~~~~-~~~~~------------------~~L~~~~~vi~~D~r-G~G~S~~~~-~~~-~-~~~~~~ 159 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGF-FFRNF------------------DALASRFRVIAIDQL-GWGGSSRPD-FTC-K-STEETE 159 (402)
T ss_pred CCCCEEEEECCCCcchhH-HHHHH------------------HHHHhCCEEEEECCC-CCCCCCCCC-ccc-c-cHHHHH
Confidence 467999999999776655 43211 112345799999999 999984321 111 1 334444
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCC
Q 011738 169 NDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (478)
Q Consensus 169 ~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 232 (478)
+.+.+.+.+|.+.. ...+++|+|||+||..+..+|.+-.+ .++++++.++..
T Consensus 160 ~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~p~---------~v~~lvl~~p~~ 211 (402)
T PLN02894 160 AWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKHPE---------HVQHLILVGPAG 211 (402)
T ss_pred HHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhCch---------hhcEEEEECCcc
Confidence 45556666666533 24589999999999988877765433 388999888764
No 35
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.04 E-value=7.5e-09 Score=104.91 Aligned_cols=62 Identities=16% Similarity=0.157 Sum_probs=53.3
Q ss_pred CCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcC-CcccccCCChHHHHHHHH
Q 011738 387 GLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRG-AGHAVPVFKPSDSLALFS 465 (478)
Q Consensus 387 ~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~-AGHmvP~dqP~~a~~mi~ 465 (478)
.++|||..|+.|.++|....+...+.+. .+-.+++|.+ |||+++.++|+....++.
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~-----------------------p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~ 333 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG-----------------------PRGSLRVLRSPYGHDAFLKETDRIDAILT 333 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC-----------------------CCCeEEEEeCCccHHHHhcCHHHHHHHHH
Confidence 6899999999999999888888777753 2456788874 999999999999999999
Q ss_pred HHHcCC
Q 011738 466 SFLLGD 471 (478)
Q Consensus 466 ~fl~~~ 471 (478)
+||...
T Consensus 334 ~FL~~~ 339 (343)
T PRK08775 334 TALRST 339 (343)
T ss_pred HHHHhc
Confidence 999653
No 36
>PRK06489 hypothetical protein; Provisional
Probab=99.02 E-value=4e-08 Score=100.29 Aligned_cols=140 Identities=16% Similarity=0.125 Sum_probs=81.6
Q ss_pred ceeEEeEEEeecCCCceEEEEEEEecC---CCCCCCceEEeCCCCChhhhhhh--hhcccCCeEEcCCCCcc-ccCCCCc
Q 011738 60 FRHYAGYVTVNEHNGRALFYWFYEAMT---RPQEKPLVLWLNGGPGCSSVGYG--ATQEIGPFLVDTDGRGL-QFNPYAW 133 (478)
Q Consensus 60 ~~~~sGy~~~~~~~~~~lfy~f~es~~---~~~~~P~~lwl~GGPG~ss~~~g--~~~E~GP~~~~~~~~~~-~~n~~sw 133 (478)
+...+|. .++ +..++|.-+.... ++++.|.||.+||++|.+.. +- .+.+ .+ .....--
T Consensus 39 ~~~~~~~-~~~---g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~-~~~~~~~~-----------~l~~~~~~l~ 102 (360)
T PRK06489 39 FTFHSGE-TLP---ELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKS-FLSPTFAG-----------ELFGPGQPLD 102 (360)
T ss_pred eeccCCC-CcC---CceEEEEecCCCCcccccCCCCeEEEeCCCCCchhh-hccchhHH-----------HhcCCCCccc
Confidence 4455664 332 3567777442110 12236889999999886555 31 1100 00 0000111
Q ss_pred ccccceeeeccCCCcccCCccCCC---CCcccChHHHHHHHHHHHHHHHHhCCCCCCCcE-EEEeccCCccchHHHHHHH
Q 011738 134 NKEANMLFLESPIGVGFSYSNTTN---DYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTF-YIAGESYAGRYIPELTELI 209 (478)
Q Consensus 134 ~~~~~~l~iD~PvG~GfSy~~~~~---~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~-~i~GeSYgG~yvp~la~~i 209 (478)
.+.+++|.+|.| |.|.|-..... ....++.++.++++..++.+ ++.-.++ +|+|+|+||..+-.+|.+-
T Consensus 103 ~~~~~Via~Dl~-GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~------~lgi~~~~~lvG~SmGG~vAl~~A~~~ 175 (360)
T PRK06489 103 ASKYFIILPDGI-GHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE------GLGVKHLRLILGTSMGGMHAWMWGEKY 175 (360)
T ss_pred ccCCEEEEeCCC-CCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH------hcCCCceeEEEEECHHHHHHHHHHHhC
Confidence 356899999999 99999532211 01112566677776665532 2222456 4899999999888888775
Q ss_pred HHhcCCCCceeeeeeeEecCCC
Q 011738 210 HDRNKDPSLYIDLKGILLGNPE 231 (478)
Q Consensus 210 ~~~n~~~~~~inLkGi~IGng~ 231 (478)
.+. ++++++.++.
T Consensus 176 P~~---------V~~LVLi~s~ 188 (360)
T PRK06489 176 PDF---------MDALMPMASQ 188 (360)
T ss_pred chh---------hheeeeeccC
Confidence 444 8888887764
No 37
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.01 E-value=7.2e-09 Score=106.76 Aligned_cols=129 Identities=19% Similarity=0.234 Sum_probs=86.8
Q ss_pred CCceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCC
Q 011738 73 NGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSY 152 (478)
Q Consensus 73 ~~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy 152 (478)
.+..+|++.++... .+.+|+||++||.++.+.. +-.+.+ .+. .+-++++-+|.| |.|.|-
T Consensus 119 ~~~~l~~~~~~p~~-~~~~~~Vl~lHG~~~~~~~-~~~~a~-----------~L~------~~Gy~V~~~D~r-GhG~S~ 178 (395)
T PLN02652 119 RRNALFCRSWAPAA-GEMRGILIIIHGLNEHSGR-YLHFAK-----------QLT------SCGFGVYAMDWI-GHGGSD 178 (395)
T ss_pred CCCEEEEEEecCCC-CCCceEEEEECCchHHHHH-HHHHHH-----------HHH------HCCCEEEEeCCC-CCCCCC
Confidence 34678888776642 3456899999999876665 433331 111 224699999999 999996
Q ss_pred ccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCC
Q 011738 153 SNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (478)
Q Consensus 153 ~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 232 (478)
... .+.. +.+..++|+..+++..-..+| ..+++|+|||+||..+..+|.+ .+ ..-.++|+++.+|++
T Consensus 179 ~~~--~~~~-~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~~----p~---~~~~v~glVL~sP~l 245 (395)
T PLN02652 179 GLH--GYVP-SLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAASY----PS---IEDKLEGIVLTSPAL 245 (395)
T ss_pred CCC--CCCc-CHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHhc----cC---cccccceEEEECccc
Confidence 432 2222 566777888888887666555 4589999999999877655431 11 112489999998886
Q ss_pred Cc
Q 011738 233 ST 234 (478)
Q Consensus 233 dp 234 (478)
..
T Consensus 246 ~~ 247 (395)
T PLN02652 246 RV 247 (395)
T ss_pred cc
Confidence 43
No 38
>PLN02965 Probable pheophorbidase
Probab=98.99 E-value=1.3e-08 Score=98.42 Aligned_cols=101 Identities=12% Similarity=0.173 Sum_probs=69.8
Q ss_pred eEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccChHHHHHHHHH
Q 011738 94 VLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYT 173 (478)
Q Consensus 94 ~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~ 173 (478)
||+++|.++.+.. |-...+ .|. .+...+|-+|.| |.|.|-...... ++.++.|+++.+
T Consensus 6 vvllHG~~~~~~~-w~~~~~-----------~L~------~~~~~via~Dl~-G~G~S~~~~~~~---~~~~~~a~dl~~ 63 (255)
T PLN02965 6 FVFVHGASHGAWC-WYKLAT-----------LLD------AAGFKSTCVDLT-GAGISLTDSNTV---SSSDQYNRPLFA 63 (255)
T ss_pred EEEECCCCCCcCc-HHHHHH-----------HHh------hCCceEEEecCC-cCCCCCCCcccc---CCHHHHHHHHHH
Confidence 8899998765555 432221 111 334689999999 999995332211 266777888777
Q ss_pred HHHHHHHhCCCCCC-CcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCC
Q 011738 174 FLHKWFLKFPSYRR-RTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (478)
Q Consensus 174 ~l~~F~~~fp~~~~-~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 232 (478)
++.. +.. ++++|+|+|+||..+..+|.+..+. ++++++.|+..
T Consensus 64 ~l~~-------l~~~~~~~lvGhSmGG~ia~~~a~~~p~~---------v~~lvl~~~~~ 107 (255)
T PLN02965 64 LLSD-------LPPDHKVILVGHSIGGGSVTEALCKFTDK---------ISMAIYVAAAM 107 (255)
T ss_pred HHHh-------cCCCCCEEEEecCcchHHHHHHHHhCchh---------eeEEEEEcccc
Confidence 7763 322 5899999999999888888765333 88999888753
No 39
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.98 E-value=3.9e-09 Score=99.46 Aligned_cols=105 Identities=23% Similarity=0.305 Sum_probs=69.7
Q ss_pred CCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccChHHHHHH
Q 011738 91 KPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTAND 170 (478)
Q Consensus 91 ~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~ 170 (478)
.|+||+++|.+|.+.. +-.+.+ .+ .+.++++-+|.| |.|.|..... ....+.++.+++
T Consensus 1 ~~~vv~~hG~~~~~~~-~~~~~~-----------~L-------~~~~~v~~~d~~-g~G~s~~~~~--~~~~~~~~~~~~ 58 (251)
T TIGR03695 1 KPVLVFLHGFLGSGAD-WQALIE-----------LL-------GPHFRCLAIDLP-GHGSSQSPDE--IERYDFEEAAQD 58 (251)
T ss_pred CCEEEEEcCCCCchhh-HHHHHH-----------Hh-------cccCeEEEEcCC-CCCCCCCCCc--cChhhHHHHHHH
Confidence 4889999999887776 543331 11 134799999999 9999954321 111145555555
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCC
Q 011738 171 SYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (478)
Q Consensus 171 ~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 232 (478)
+. ..+.+.. ..++++|+|||+||..+..+|.+..+ .++++++.++..
T Consensus 59 ~~---~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~~~~---------~v~~lil~~~~~ 105 (251)
T TIGR03695 59 IL---ATLLDQL---GIEPFFLVGYSMGGRIALYYALQYPE---------RVQGLILESGSP 105 (251)
T ss_pred HH---HHHHHHc---CCCeEEEEEeccHHHHHHHHHHhCch---------heeeeEEecCCC
Confidence 22 2222322 35689999999999999888876533 388999988754
No 40
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.98 E-value=2.3e-08 Score=97.43 Aligned_cols=116 Identities=17% Similarity=0.210 Sum_probs=85.2
Q ss_pred eeEEeEEEeecCCCceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccc-cce
Q 011738 61 RHYAGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKE-ANM 139 (478)
Q Consensus 61 ~~~sGy~~~~~~~~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~-~~~ 139 (478)
....+|++++. +++++.|. .+++.|+++.|+|=|=.+=. +-.- --..... ..+
T Consensus 21 ~~~hk~~~~~g-----I~~h~~e~--g~~~gP~illlHGfPe~wys-wr~q------------------~~~la~~~~rv 74 (322)
T KOG4178|consen 21 AISHKFVTYKG-----IRLHYVEG--GPGDGPIVLLLHGFPESWYS-WRHQ------------------IPGLASRGYRV 74 (322)
T ss_pred hcceeeEEEcc-----EEEEEEee--cCCCCCEEEEEccCCccchh-hhhh------------------hhhhhhcceEE
Confidence 56688888852 77887766 78899999999998876544 2110 0111222 789
Q ss_pred eeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHh
Q 011738 140 LFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDR 212 (478)
Q Consensus 140 l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~ 212 (478)
+.+|.+ |.|+|-...... .++.+..+.|+..+|. .+...+++++||+||+..+=.+|....++
T Consensus 75 iA~Dlr-GyG~Sd~P~~~~--~Yt~~~l~~di~~lld-------~Lg~~k~~lvgHDwGaivaw~la~~~Per 137 (322)
T KOG4178|consen 75 IAPDLR-GYGFSDAPPHIS--EYTIDELVGDIVALLD-------HLGLKKAFLVGHDWGAIVAWRLALFYPER 137 (322)
T ss_pred EecCCC-CCCCCCCCCCcc--eeeHHHHHHHHHHHHH-------HhccceeEEEeccchhHHHHHHHHhChhh
Confidence 999999 999997655421 2378888888888877 44467899999999999888888877666
No 41
>PRK10749 lysophospholipase L2; Provisional
Probab=98.95 E-value=2.3e-08 Score=100.85 Aligned_cols=125 Identities=15% Similarity=0.080 Sum_probs=82.9
Q ss_pred CceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCc
Q 011738 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYS 153 (478)
Q Consensus 74 ~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~ 153 (478)
+..++|+.++.. ..+|+||.++|-.+.+.. +..+.. .+. .+-++++-+|.| |.|.|..
T Consensus 40 g~~l~~~~~~~~---~~~~~vll~HG~~~~~~~-y~~~~~-----------~l~------~~g~~v~~~D~~-G~G~S~~ 97 (330)
T PRK10749 40 DIPIRFVRFRAP---HHDRVVVICPGRIESYVK-YAELAY-----------DLF------HLGYDVLIIDHR-GQGRSGR 97 (330)
T ss_pred CCEEEEEEccCC---CCCcEEEEECCccchHHH-HHHHHH-----------HHH------HCCCeEEEEcCC-CCCCCCC
Confidence 467888876532 456889999998665544 332220 011 234699999999 9999953
Q ss_pred cCCC---CCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 011738 154 NTTN---DYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNP 230 (478)
Q Consensus 154 ~~~~---~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng 230 (478)
.... ... .+.+..++++..+++...+.++ ..+++++|+|+||..+..+|.+- +-.++|+++.+|
T Consensus 98 ~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~---~~~~~l~GhSmGG~ia~~~a~~~---------p~~v~~lvl~~p 164 (330)
T PRK10749 98 LLDDPHRGHV-ERFNDYVDDLAAFWQQEIQPGP---YRKRYALAHSMGGAILTLFLQRH---------PGVFDAIALCAP 164 (330)
T ss_pred CCCCCCcCcc-ccHHHHHHHHHHHHHHHHhcCC---CCCeEEEEEcHHHHHHHHHHHhC---------CCCcceEEEECc
Confidence 2111 111 1567778888888876655433 56899999999998777766542 123899999988
Q ss_pred CCC
Q 011738 231 ETS 233 (478)
Q Consensus 231 ~~d 233 (478)
...
T Consensus 165 ~~~ 167 (330)
T PRK10749 165 MFG 167 (330)
T ss_pred hhc
Confidence 754
No 42
>PRK07581 hypothetical protein; Validated
Probab=98.91 E-value=8.4e-08 Score=96.95 Aligned_cols=60 Identities=12% Similarity=0.078 Sum_probs=53.2
Q ss_pred cCCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcC-CcccccCCChHHHHHHH
Q 011738 386 AGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRG-AGHAVPVFKPSDSLALF 464 (478)
Q Consensus 386 ~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~-AGHmvP~dqP~~a~~mi 464 (478)
-.++|||..|+.|.++|....+.+.+.+. +.++++|.+ +||+++.+||+....++
T Consensus 274 I~~PtLvI~G~~D~~~p~~~~~~l~~~ip------------------------~a~l~~i~~~~GH~~~~~~~~~~~~~~ 329 (339)
T PRK07581 274 ITAKTFVMPISTDLYFPPEDCEAEAALIP------------------------NAELRPIESIWGHLAGFGQNPADIAFI 329 (339)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhCC------------------------CCeEEEeCCCCCccccccCcHHHHHHH
Confidence 36899999999999999988888777654 567789998 99999999999999999
Q ss_pred HHHHc
Q 011738 465 SSFLL 469 (478)
Q Consensus 465 ~~fl~ 469 (478)
++||.
T Consensus 330 ~~~~~ 334 (339)
T PRK07581 330 DAALK 334 (339)
T ss_pred HHHHH
Confidence 99984
No 43
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.83 E-value=4.6e-08 Score=116.97 Aligned_cols=108 Identities=18% Similarity=0.240 Sum_probs=75.3
Q ss_pred CCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCC----CCcccC
Q 011738 88 PQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTN----DYEMLG 163 (478)
Q Consensus 88 ~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~----~~~~~~ 163 (478)
.++.|.||++||.+|++.. +..+.+ .+ .+.++++.+|.| |.|.|...... .....+
T Consensus 1368 ~~~~~~vVllHG~~~s~~~-w~~~~~-----------~L-------~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~~~~~s 1427 (1655)
T PLN02980 1368 NAEGSVVLFLHGFLGTGED-WIPIMK-----------AI-------SGSARCISIDLP-GHGGSKIQNHAKETQTEPTLS 1427 (1655)
T ss_pred CCCCCeEEEECCCCCCHHH-HHHHHH-----------HH-------hCCCEEEEEcCC-CCCCCCCccccccccccccCC
Confidence 4457899999999998877 544431 11 234799999999 99998643210 001125
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCC
Q 011738 164 DDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (478)
Q Consensus 164 ~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 231 (478)
.+..++++.++++. +...+++|+|+|+||..+-.+|.+..+. ++++++.+|.
T Consensus 1428 i~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P~~---------V~~lVlis~~ 1479 (1655)
T PLN02980 1428 VELVADLLYKLIEH-------ITPGKVTLVGYSMGARIALYMALRFSDK---------IEGAVIISGS 1479 (1655)
T ss_pred HHHHHHHHHHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhChHh---------hCEEEEECCC
Confidence 66777777777653 3346899999999999888888765443 8888887764
No 44
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.76 E-value=5.8e-07 Score=92.41 Aligned_cols=66 Identities=18% Similarity=0.182 Sum_probs=53.9
Q ss_pred cCCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEc-CCcccccCCChHHHHHHH
Q 011738 386 AGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVR-GAGHAVPVFKPSDSLALF 464 (478)
Q Consensus 386 ~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~-~AGHmvP~dqP~~a~~mi 464 (478)
-..+|||..|+.|.++|....+...+.+.=. -...+++.|. ++||+.++++|+...+.|
T Consensus 308 I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a--------------------~~~~~l~~i~~~~GH~~~le~p~~~~~~L 367 (379)
T PRK00175 308 IKARFLVVSFTSDWLFPPARSREIVDALLAA--------------------GADVSYAEIDSPYGHDAFLLDDPRYGRLV 367 (379)
T ss_pred CCCCEEEEEECCccccCHHHHHHHHHHHHhc--------------------CCCeEEEEeCCCCCchhHhcCHHHHHHHH
Confidence 3689999999999999999888777776400 0124678886 999999999999999999
Q ss_pred HHHHcCC
Q 011738 465 SSFLLGD 471 (478)
Q Consensus 465 ~~fl~~~ 471 (478)
.+||.+.
T Consensus 368 ~~FL~~~ 374 (379)
T PRK00175 368 RAFLERA 374 (379)
T ss_pred HHHHHhh
Confidence 9999764
No 45
>PLN02511 hydrolase
Probab=98.70 E-value=8e-08 Score=99.08 Aligned_cols=137 Identities=17% Similarity=0.135 Sum_probs=81.6
Q ss_pred EeEEEeecCCCceEEEEEEEe--cCCCCCCCceEEeCCCCChhhhhh-hhhcccCCeEEcCCCCccccCCCCccccccee
Q 011738 64 AGYVTVNEHNGRALFYWFYEA--MTRPQEKPLVLWLNGGPGCSSVGY-GATQEIGPFLVDTDGRGLQFNPYAWNKEANML 140 (478)
Q Consensus 64 sGy~~~~~~~~~~lfy~f~es--~~~~~~~P~~lwl~GGPG~ss~~~-g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l 140 (478)
.-++...+ |..+.+..+.. ...+.+.|+||.++|..|+|...+ ..+. ..-..+-.+++
T Consensus 73 re~l~~~D--G~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~-----------------~~~~~~g~~vv 133 (388)
T PLN02511 73 RECLRTPD--GGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHML-----------------LRARSKGWRVV 133 (388)
T ss_pred EEEEECCC--CCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHH-----------------HHHHHCCCEEE
Confidence 44666543 45565544432 223567899999999999764211 1111 00113456899
Q ss_pred eeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCcee
Q 011738 141 FLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYI 220 (478)
Q Consensus 141 ~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~i 220 (478)
-+|.| |.|.|-...... .....++|+.++++..-.++| ..+++++|+|.||..+-.++.+-.+ ..
T Consensus 134 ~~d~r-G~G~s~~~~~~~----~~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~~~~~-------~~ 198 (388)
T PLN02511 134 VFNSR-GCADSPVTTPQF----YSASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLGEEGE-------NC 198 (388)
T ss_pred EEecC-CCCCCCCCCcCE----EcCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHHhcCC-------CC
Confidence 99999 999985432221 123446677777766656666 5689999999999887666544321 12
Q ss_pred eeeeeEecCCCCCc
Q 011738 221 DLKGILLGNPETST 234 (478)
Q Consensus 221 nLkGi~IGng~~dp 234 (478)
.|++.++.++-.+.
T Consensus 199 ~v~~~v~is~p~~l 212 (388)
T PLN02511 199 PLSGAVSLCNPFDL 212 (388)
T ss_pred CceEEEEECCCcCH
Confidence 36665544443343
No 46
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=98.66 E-value=1.3e-06 Score=85.63 Aligned_cols=107 Identities=12% Similarity=0.140 Sum_probs=72.2
Q ss_pred CCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccChHHHH
Q 011738 89 QEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTA 168 (478)
Q Consensus 89 ~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a 168 (478)
.+.|.||+++|..+.++. +..+.+ .+.. +..+++-+|.| |.|.|....... .+.++.+
T Consensus 16 ~~~p~vvliHG~~~~~~~-w~~~~~-----------~L~~------~g~~vi~~dl~-g~G~s~~~~~~~---~~~~~~~ 73 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWC-WYKIRC-----------LMEN------SGYKVTCIDLK-SAGIDQSDADSV---TTFDEYN 73 (273)
T ss_pred CCCCeEEEECCCCCCcCc-HHHHHH-----------HHHh------CCCEEEEeccc-CCCCCCCCcccC---CCHHHHH
Confidence 667999999998776666 543331 1111 23699999999 999875332211 1666777
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCC
Q 011738 169 NDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (478)
Q Consensus 169 ~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 232 (478)
+++.++++. .. ...+++|+||||||..+..++.+..+. ++++++.++..
T Consensus 74 ~~l~~~i~~----l~--~~~~v~lvGhS~GG~v~~~~a~~~p~~---------v~~lv~~~~~~ 122 (273)
T PLN02211 74 KPLIDFLSS----LP--ENEKVILVGHSAGGLSVTQAIHRFPKK---------ICLAVYVAATM 122 (273)
T ss_pred HHHHHHHHh----cC--CCCCEEEEEECchHHHHHHHHHhChhh---------eeEEEEecccc
Confidence 776666653 21 146899999999999888877654332 78888876653
No 47
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.65 E-value=3.6e-06 Score=85.01 Aligned_cols=152 Identities=17% Similarity=0.155 Sum_probs=86.9
Q ss_pred CCceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhc---c----cCCeEEcCCCCccccC---CCCc-ccccceee
Q 011738 73 NGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQ---E----IGPFLVDTDGRGLQFN---PYAW-NKEANMLF 141 (478)
Q Consensus 73 ~~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~---E----~GP~~~~~~~~~~~~n---~~sw-~~~~~~l~ 141 (478)
.+..|++..++.. ..+.+|+.++|= |..+. .-.+. | -+|+.|+.+.. ..++ -..+ .+-..++-
T Consensus 6 ~g~~l~~~~~~~~---~~kg~v~i~HG~-~eh~~-~~~~~~~~~~~~~~~~~~~~~~ry-~~y~~~~~~~l~~~G~~V~~ 79 (332)
T TIGR01607 6 DGLLLKTYSWIVK---NAIGIIVLIHGL-KSHLR-LQFLKINAKIVNNDRAVLIDTDNY-YIYKDSWIENFNKNGYSVYG 79 (332)
T ss_pred CCCeEEEeeeecc---CCeEEEEEECCC-chhhh-hhhhhcCcccCCCCeeEEEcCCcc-eEeeHHHHHHHHHCCCcEEE
Confidence 3566877776553 245688888874 33332 11111 1 12344432210 0001 0122 33589999
Q ss_pred eccCCCcccCCccCC-CCCcccChHHHHHHHHHHHHHHHHhC----------------CCCC-CCcEEEEeccCCccchH
Q 011738 142 LESPIGVGFSYSNTT-NDYEMLGDDFTANDSYTFLHKWFLKF----------------PSYR-RRTFYIAGESYAGRYIP 203 (478)
Q Consensus 142 iD~PvG~GfSy~~~~-~~~~~~~~~~~a~~~~~~l~~F~~~f----------------p~~~-~~~~~i~GeSYgG~yvp 203 (478)
+|.| |.|.|.+... ..... +.++.++|+..+++..-+.. .++. +.|++|+|||+||..+.
T Consensus 80 ~D~r-GHG~S~~~~~~~g~~~-~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~ 157 (332)
T TIGR01607 80 LDLQ-GHGESDGLQNLRGHIN-CFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIAL 157 (332)
T ss_pred eccc-ccCCCccccccccchh-hHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHH
Confidence 9999 9999975422 11111 56778888888887654310 0222 57999999999999887
Q ss_pred HHHHHHHHhcCCCCceeeeeeeEecCCCCC
Q 011738 204 ELTELIHDRNKDPSLYIDLKGILLGNPETS 233 (478)
Q Consensus 204 ~la~~i~~~n~~~~~~inLkGi~IGng~~d 233 (478)
.++....+.... .....++|+++.+|.+.
T Consensus 158 ~~~~~~~~~~~~-~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 158 RLLELLGKSNEN-NDKLNIKGCISLSGMIS 186 (332)
T ss_pred HHHHHhcccccc-ccccccceEEEeccceE
Confidence 777655332100 01235899998888764
No 48
>PRK05855 short chain dehydrogenase; Validated
Probab=98.61 E-value=9e-07 Score=95.74 Aligned_cols=101 Identities=15% Similarity=0.156 Sum_probs=68.7
Q ss_pred CceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCc
Q 011738 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYS 153 (478)
Q Consensus 74 ~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~ 153 (478)
+..+.|+-+ .+.+.|.||+++|.++.+.. |.-+.+ . +.+..+++.+|.| |.|.|..
T Consensus 12 g~~l~~~~~----g~~~~~~ivllHG~~~~~~~-w~~~~~-----------~-------L~~~~~Vi~~D~~-G~G~S~~ 67 (582)
T PRK05855 12 GVRLAVYEW----GDPDRPTVVLVHGYPDNHEV-WDGVAP-----------L-------LADRFRVVAYDVR-GAGRSSA 67 (582)
T ss_pred CEEEEEEEc----CCCCCCeEEEEcCCCchHHH-HHHHHH-----------H-------hhcceEEEEecCC-CCCCCCC
Confidence 466777643 23357999999999877766 554432 1 1334789999999 9999964
Q ss_pred cCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHH
Q 011738 154 NTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELT 206 (478)
Q Consensus 154 ~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la 206 (478)
..... ..+.++.++|+..+++..- + ..+++|+|+|+||..+-.++
T Consensus 68 ~~~~~--~~~~~~~a~dl~~~i~~l~---~---~~~~~lvGhS~Gg~~a~~~a 112 (582)
T PRK05855 68 PKRTA--AYTLARLADDFAAVIDAVS---P---DRPVHLLAHDWGSIQGWEAV 112 (582)
T ss_pred CCccc--ccCHHHHHHHHHHHHHHhC---C---CCcEEEEecChHHHHHHHHH
Confidence 33211 1267888889888887521 1 45699999999995544443
No 49
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.60 E-value=2.9e-06 Score=86.32 Aligned_cols=65 Identities=18% Similarity=0.200 Sum_probs=51.6
Q ss_pred HcCCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEc-CCcccccCCChHHHHHH
Q 011738 385 EAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVR-GAGHAVPVFKPSDSLAL 463 (478)
Q Consensus 385 ~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~-~AGHmvP~dqP~~a~~m 463 (478)
+-..+||+..|+.|.++|....+...+.+. ..+ -..+|+.|. ++||+++.++|+...+.
T Consensus 286 ~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~--~~~------------------~~v~~~~i~~~~GH~~~le~p~~~~~~ 345 (351)
T TIGR01392 286 RIKAPFLVVSITSDWLFPPAESRELAKALP--AAG------------------LRVTYVEIESPYGHDAFLVETDQVEEL 345 (351)
T ss_pred hCCCCEEEEEeCCccccCHHHHHHHHHHHh--hcC------------------CceEEEEeCCCCCcchhhcCHHHHHHH
Confidence 336899999999999999998888877764 000 013455664 89999999999999999
Q ss_pred HHHHHc
Q 011738 464 FSSFLL 469 (478)
Q Consensus 464 i~~fl~ 469 (478)
|.+||+
T Consensus 346 l~~FL~ 351 (351)
T TIGR01392 346 IRGFLR 351 (351)
T ss_pred HHHHhC
Confidence 999984
No 50
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.57 E-value=1.2e-06 Score=87.87 Aligned_cols=60 Identities=28% Similarity=0.382 Sum_probs=53.7
Q ss_pred CCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCcccccCCChHHHHHHHHH
Q 011738 387 GLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHAVPVFKPSDSLALFSS 466 (478)
Q Consensus 387 ~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHmvP~dqP~~a~~mi~~ 466 (478)
+.+|||..|+.|.++|....+...+++. |..+..|.+|||.+..++|+.....|..
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~~p------------------------n~~~~~I~~~gH~~h~e~Pe~~~~~i~~ 319 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKKLP------------------------NAELVEIPGAGHLPHLERPEEVAALLRS 319 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhhCC------------------------CceEEEeCCCCcccccCCHHHHHHHHHH
Confidence 4889999999999999997766666543 8999999999999999999999999999
Q ss_pred HHcC
Q 011738 467 FLLG 470 (478)
Q Consensus 467 fl~~ 470 (478)
|+.+
T Consensus 320 Fi~~ 323 (326)
T KOG1454|consen 320 FIAR 323 (326)
T ss_pred HHHH
Confidence 9965
No 51
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.54 E-value=1.6e-06 Score=86.13 Aligned_cols=135 Identities=19% Similarity=0.216 Sum_probs=91.4
Q ss_pred EeEEEeecCCCceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeec
Q 011738 64 AGYVTVNEHNGRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLE 143 (478)
Q Consensus 64 sGy~~~~~~~~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD 143 (478)
.|+....+ +..++|+.+++..++. .+|+++||.=..+.- +--+.+ .+. ..=+.++=+|
T Consensus 11 ~~~~~~~d--~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~r-y~~la~-----------~l~------~~G~~V~~~D 68 (298)
T COG2267 11 EGYFTGAD--GTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGR-YEELAD-----------DLA------ARGFDVYALD 68 (298)
T ss_pred cceeecCC--CceEEEEeecCCCCCC--cEEEEecCchHHHHH-HHHHHH-----------HHH------hCCCEEEEec
Confidence 44444432 5789999887765444 899999998666655 443331 122 2235889999
Q ss_pred cCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeee
Q 011738 144 SPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLK 223 (478)
Q Consensus 144 ~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLk 223 (478)
+| |.|.|.- ....... +.++...|+..+++..-...| ..|++|+|||.||-.+...+.... -+++
T Consensus 69 ~R-GhG~S~r-~~rg~~~-~f~~~~~dl~~~~~~~~~~~~---~~p~~l~gHSmGg~Ia~~~~~~~~---------~~i~ 133 (298)
T COG2267 69 LR-GHGRSPR-GQRGHVD-SFADYVDDLDAFVETIAEPDP---GLPVFLLGHSMGGLIALLYLARYP---------PRID 133 (298)
T ss_pred CC-CCCCCCC-CCcCCch-hHHHHHHHHHHHHHHHhccCC---CCCeEEEEeCcHHHHHHHHHHhCC---------cccc
Confidence 99 9999962 1122222 455566666666665554444 679999999999987777776543 3499
Q ss_pred eeEecCCCCCch
Q 011738 224 GILLGNPETSTA 235 (478)
Q Consensus 224 Gi~IGng~~dp~ 235 (478)
|++|-+|++...
T Consensus 134 ~~vLssP~~~l~ 145 (298)
T COG2267 134 GLVLSSPALGLG 145 (298)
T ss_pred EEEEECccccCC
Confidence 999999998876
No 52
>PRK10985 putative hydrolase; Provisional
Probab=98.46 E-value=3.7e-06 Score=84.58 Aligned_cols=129 Identities=17% Similarity=0.155 Sum_probs=67.9
Q ss_pred CceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhh-hhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCC
Q 011738 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYG-ATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSY 152 (478)
Q Consensus 74 ~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g-~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy 152 (478)
+..+.+++.+....+.++|+||.++|.+|++...+. .+.+ .+. .+-.+++-+|.+ |.|-|-
T Consensus 41 g~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~-----------~l~------~~G~~v~~~d~r-G~g~~~ 102 (324)
T PRK10985 41 GDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLE-----------AAQ------KRGWLGVVMHFR-GCSGEP 102 (324)
T ss_pred CCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHH-----------HHH------HCCCEEEEEeCC-CCCCCc
Confidence 344544443332334568999999999987432111 0110 111 112478888988 887653
Q ss_pred ccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCC
Q 011738 153 SNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (478)
Q Consensus 153 ~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 232 (478)
......+.. . ..+|+..+++..-+.++ ..+++++|+|+||..+...+.+... ...++++++.++-.
T Consensus 103 ~~~~~~~~~-~---~~~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~~~~~~-------~~~~~~~v~i~~p~ 168 (324)
T PRK10985 103 NRLHRIYHS-G---ETEDARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLLAKEGD-------DLPLDAAVIVSAPL 168 (324)
T ss_pred cCCcceECC-C---chHHHHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHHHhhCC-------CCCccEEEEEcCCC
Confidence 221111111 1 13444444433223444 5689999999999876555543211 12266655555554
Q ss_pred Cc
Q 011738 233 ST 234 (478)
Q Consensus 233 dp 234 (478)
+.
T Consensus 169 ~~ 170 (324)
T PRK10985 169 ML 170 (324)
T ss_pred CH
Confidence 54
No 53
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.43 E-value=2.6e-06 Score=93.06 Aligned_cols=130 Identities=18% Similarity=0.299 Sum_probs=81.2
Q ss_pred CCceEEEEEEEecC-CC-CCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCC-cccccceeeeccCCCcc
Q 011738 73 NGRALFYWFYEAMT-RP-QEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYA-WNKEANMLFLESPIGVG 149 (478)
Q Consensus 73 ~~~~lfy~f~es~~-~~-~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~s-w~~~~~~l~iD~PvG~G 149 (478)
.|..+..|++.-.. ++ ++-|+|++++||| +++ .|. ....+... +.+-+.||+++..--+|
T Consensus 374 dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~-~~~--------------~~~~~~q~~~~~G~~V~~~n~RGS~G 436 (620)
T COG1506 374 DGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQ-VGY--------------SFNPEIQVLASAGYAVLAPNYRGSTG 436 (620)
T ss_pred CCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccc-ccc--------------ccchhhHHHhcCCeEEEEeCCCCCCc
Confidence 46789999887653 22 2359999999999 555 340 01111212 34567899999553334
Q ss_pred cCC--ccCCC-CCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeE
Q 011738 150 FSY--SNTTN-DYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGIL 226 (478)
Q Consensus 150 fSy--~~~~~-~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~ 226 (478)
|+. ..... ++ -....+|+.+++. |++..|..-..++.|+|.||||...-.++.+-- -++..+
T Consensus 437 yG~~F~~~~~~~~----g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~----------~f~a~~ 501 (620)
T COG1506 437 YGREFADAIRGDW----GGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP----------RFKAAV 501 (620)
T ss_pred cHHHHHHhhhhcc----CCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc----------hhheEE
Confidence 322 22111 11 1234678888888 888999887788999999999976655554321 266666
Q ss_pred ecCCCCCc
Q 011738 227 LGNPETST 234 (478)
Q Consensus 227 IGng~~dp 234 (478)
...|.++.
T Consensus 502 ~~~~~~~~ 509 (620)
T COG1506 502 AVAGGVDW 509 (620)
T ss_pred eccCcchh
Confidence 66665554
No 54
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.42 E-value=3.4e-07 Score=85.86 Aligned_cols=57 Identities=19% Similarity=0.229 Sum_probs=50.1
Q ss_pred HcCCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCcccccCCChHHHHHHH
Q 011738 385 EAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHAVPVFKPSDSLALF 464 (478)
Q Consensus 385 ~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHmvP~dqP~~a~~mi 464 (478)
+..+++|+.+|..|.++|....+...+.+. +..++++.++||....+.|+..-++|
T Consensus 173 ~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~------------------------~~~~~~~~~~GH~~~~~~~~~~~~~i 228 (230)
T PF00561_consen 173 NIKVPTLIIWGEDDPLVPPESSEQLAKLIP------------------------NSQLVLIEGSGHFAFLEGPDEFNEII 228 (230)
T ss_dssp TTTSEEEEEEETTCSSSHHHHHHHHHHHST------------------------TEEEEEETTCCSTHHHHSHHHHHHHH
T ss_pred ccCCCeEEEEeCCCCCCCHHHHHHHHHhcC------------------------CCEEEECCCCChHHHhcCHHhhhhhh
Confidence 357999999999999999998888666654 67889999999999999999998887
Q ss_pred H
Q 011738 465 S 465 (478)
Q Consensus 465 ~ 465 (478)
.
T Consensus 229 ~ 229 (230)
T PF00561_consen 229 I 229 (230)
T ss_dssp H
T ss_pred c
Confidence 5
No 55
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.40 E-value=1.4e-05 Score=78.44 Aligned_cols=79 Identities=19% Similarity=0.144 Sum_probs=55.9
Q ss_pred cceeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCC
Q 011738 137 ANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDP 216 (478)
Q Consensus 137 ~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~ 216 (478)
.+++-+|.| |.|.|.... . +.++..+|+.++++.+-+..|.+ .+++++|+|.||..+-.+|.. .
T Consensus 58 ~~v~~~Dl~-G~G~S~~~~---~---~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~~---~---- 121 (274)
T TIGR03100 58 FPVLRFDYR-GMGDSEGEN---L---GFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAPA---D---- 121 (274)
T ss_pred CEEEEeCCC-CCCCCCCCC---C---CHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhhh---C----
Confidence 799999999 999985321 1 44556677777777655555543 469999999999765555431 1
Q ss_pred CceeeeeeeEecCCCCCc
Q 011738 217 SLYIDLKGILLGNPETST 234 (478)
Q Consensus 217 ~~~inLkGi~IGng~~dp 234 (478)
-.++|+++.||++..
T Consensus 122 ---~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 122 ---LRVAGLVLLNPWVRT 136 (274)
T ss_pred ---CCccEEEEECCccCC
Confidence 139999999998653
No 56
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=98.40 E-value=1.5e-05 Score=82.93 Aligned_cols=120 Identities=18% Similarity=0.160 Sum_probs=72.4
Q ss_pred eEEEEEEEecCCCCCCCceEEeCCCCChh--hhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCc
Q 011738 76 ALFYWFYEAMTRPQEKPLVLWLNGGPGCS--SVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYS 153 (478)
Q Consensus 76 ~lfy~f~es~~~~~~~P~~lwl~GGPG~s--s~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~ 153 (478)
.+.-+++... ..+..|+|| ++||.++. .. +..+.+ .+ -.+-.++|-+|.| |+|.|..
T Consensus 180 ~l~g~l~~P~-~~~~~P~Vl-i~gG~~~~~~~~-~~~~~~-----------~L------a~~Gy~vl~~D~p-G~G~s~~ 238 (414)
T PRK05077 180 PITGFLHLPK-GDGPFPTVL-VCGGLDSLQTDY-YRLFRD-----------YL------APRGIAMLTIDMP-SVGFSSK 238 (414)
T ss_pred EEEEEEEECC-CCCCccEEE-EeCCcccchhhh-HHHHHH-----------HH------HhCCCEEEEECCC-CCCCCCC
Confidence 5555554333 234568877 56777753 23 222210 01 1223689999999 9999853
Q ss_pred cCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCC
Q 011738 154 NTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETS 233 (478)
Q Consensus 154 ~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d 233 (478)
.... . +..... ..+.+++...|.....++.++|+|+||.+++.+|..-.+ .++++++.+|.++
T Consensus 239 ~~~~---~-d~~~~~----~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~---------ri~a~V~~~~~~~ 301 (414)
T PRK05077 239 WKLT---Q-DSSLLH----QAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPP---------RLKAVACLGPVVH 301 (414)
T ss_pred CCcc---c-cHHHHH----HHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCc---------CceEEEEECCccc
Confidence 2110 0 222222 334445556666666789999999999999988864322 2889998888764
No 57
>PLN02872 triacylglycerol lipase
Probab=98.30 E-value=9.3e-06 Score=83.64 Aligned_cols=61 Identities=21% Similarity=0.314 Sum_probs=50.2
Q ss_pred CCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCccc---ccCCChHHHHHH
Q 011738 387 GLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHA---VPVFKPSDSLAL 463 (478)
Q Consensus 387 ~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHm---vP~dqP~~a~~m 463 (478)
.++|+|+.|..|.+++....+++.+.|.= ...+..+.++||+ ...+.|+..++-
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~-----------------------~~~l~~l~~~gH~dfi~~~eape~V~~~ 381 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELPS-----------------------KPELLYLENYGHIDFLLSTSAKEDVYNH 381 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCCC-----------------------ccEEEEcCCCCCHHHHhCcchHHHHHHH
Confidence 58999999999999999999999888760 1234677999996 355889999999
Q ss_pred HHHHHcC
Q 011738 464 FSSFLLG 470 (478)
Q Consensus 464 i~~fl~~ 470 (478)
|-+|+.+
T Consensus 382 Il~fL~~ 388 (395)
T PLN02872 382 MIQFFRS 388 (395)
T ss_pred HHHHHHH
Confidence 9999864
No 58
>PRK10566 esterase; Provisional
Probab=98.21 E-value=4.3e-05 Score=73.35 Aligned_cols=62 Identities=19% Similarity=0.232 Sum_probs=47.5
Q ss_pred CCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCcccccCCChHHHHHHHHH
Q 011738 387 GLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHAVPVFKPSDSLALFSS 466 (478)
Q Consensus 387 ~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHmvP~dqP~~a~~mi~~ 466 (478)
..++|+.+|..|.+++...++.+.+.++=.+.. .++++.++.++||... | ..++-+.+
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~------------------~~~~~~~~~~~~H~~~---~-~~~~~~~~ 243 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGLD------------------KNLTCLWEPGVRHRIT---P-EALDAGVA 243 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCC------------------cceEEEecCCCCCccC---H-HHHHHHHH
Confidence 478999999999999999999988887522211 2578899999999975 3 45666777
Q ss_pred HHcC
Q 011738 467 FLLG 470 (478)
Q Consensus 467 fl~~ 470 (478)
||..
T Consensus 244 fl~~ 247 (249)
T PRK10566 244 FFRQ 247 (249)
T ss_pred HHHh
Confidence 7753
No 59
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.17 E-value=8.2e-05 Score=69.52 Aligned_cols=105 Identities=24% Similarity=0.289 Sum_probs=67.5
Q ss_pred CCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccChHHHHHH
Q 011738 91 KPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTAND 170 (478)
Q Consensus 91 ~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~ 170 (478)
.|.+++++|+|+++.. +....+ .+..... + ++++.+|+| |+|.|. .. .. +....+++
T Consensus 21 ~~~i~~~hg~~~~~~~-~~~~~~-----------~~~~~~~---~-~~~~~~d~~-g~g~s~-~~--~~---~~~~~~~~ 77 (282)
T COG0596 21 GPPLVLLHGFPGSSSV-WRPVFK-----------VLPALAA---R-YRVIAPDLR-GHGRSD-PA--GY---SLSAYADD 77 (282)
T ss_pred CCeEEEeCCCCCchhh-hHHHHH-----------Hhhcccc---c-eEEEEeccc-CCCCCC-cc--cc---cHHHHHHH
Confidence 6799999999999887 443110 0111111 1 899999999 999996 11 11 22222455
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 171 SYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 171 ~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
+..+++ . +...+++++|+|+||..+-.+|.+..+. ++++++.++...+
T Consensus 78 ~~~~~~----~---~~~~~~~l~G~S~Gg~~~~~~~~~~p~~---------~~~~v~~~~~~~~ 125 (282)
T COG0596 78 LAALLD----A---LGLEKVVLVGHSMGGAVALALALRHPDR---------VRGLVLIGPAPPP 125 (282)
T ss_pred HHHHHH----H---hCCCceEEEEecccHHHHHHHHHhcchh---------hheeeEecCCCCc
Confidence 444444 2 2234499999999988777777765443 8888887776653
No 60
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.15 E-value=0.00042 Score=71.38 Aligned_cols=67 Identities=13% Similarity=0.026 Sum_probs=55.0
Q ss_pred HcCCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcC-CcccccCCChHHHHHH
Q 011738 385 EAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRG-AGHAVPVFKPSDSLAL 463 (478)
Q Consensus 385 ~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~-AGHmvP~dqP~~a~~m 463 (478)
.-..+|||..|+.|.++|....+...+.+.=. ..+.++++|.+ +||+.+.++|+.....
T Consensus 321 ~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~--------------------~~~a~l~~I~s~~GH~~~le~p~~~~~~ 380 (389)
T PRK06765 321 NIEANVLMIPCKQDLLQPPRYNYKMVDILQKQ--------------------GKYAEVYEIESINGHMAGVFDIHLFEKK 380 (389)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhc--------------------CCCeEEEEECCCCCcchhhcCHHHHHHH
Confidence 34799999999999999988777776665400 02578899985 9999999999999999
Q ss_pred HHHHHcCC
Q 011738 464 FSSFLLGD 471 (478)
Q Consensus 464 i~~fl~~~ 471 (478)
|.+|+..+
T Consensus 381 I~~FL~~~ 388 (389)
T PRK06765 381 IYEFLNRK 388 (389)
T ss_pred HHHHHccc
Confidence 99999764
No 61
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.02 E-value=1.3e-05 Score=80.78 Aligned_cols=132 Identities=19% Similarity=0.304 Sum_probs=82.9
Q ss_pred eEEEEEEEe--cCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCc
Q 011738 76 ALFYWFYEA--MTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYS 153 (478)
Q Consensus 76 ~lfy~f~es--~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~ 153 (478)
.-.||+.++ +.+|++||+||++||| |.+.+.=|+.+. ...+-+..-+...+|.+|-..-. |-
T Consensus 105 ~~s~Wlvk~P~~~~pk~DpVlIYlHGG--------GY~l~~~p~qi~-----~L~~i~~~l~~~SILvLDYsLt~--~~- 168 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPKSDPVLIYLHGG--------GYFLGTTPSQIE-----FLLNIYKLLPEVSILVLDYSLTS--SD- 168 (374)
T ss_pred cceEEEEeCCcccCCCCCcEEEEEcCC--------eeEecCCHHHHH-----HHHHHHHHcCCCeEEEEeccccc--cc-
Confidence 356999986 3468889999999999 455555555432 11122222234489999955322 00
Q ss_pred cCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCC
Q 011738 154 NTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETS 233 (478)
Q Consensus 154 ~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d 233 (478)
.....++ .+..++.+..+...+.- ...+++|.|+|-||+.+-.+..++.+.+.. +-=|++++.+||++
T Consensus 169 ~~~~~yP-----tQL~qlv~~Y~~Lv~~~---G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~----~~Pk~~iLISPWv~ 236 (374)
T PF10340_consen 169 EHGHKYP-----TQLRQLVATYDYLVESE---GNKNIILMGDSAGGNLALSFLQYLKKPNKL----PYPKSAILISPWVN 236 (374)
T ss_pred cCCCcCc-----hHHHHHHHHHHHHHhcc---CCCeEEEEecCccHHHHHHHHHHHhhcCCC----CCCceeEEECCCcC
Confidence 0122232 22333444444444322 256899999999999999999998775532 22378999999999
Q ss_pred ch
Q 011738 234 TA 235 (478)
Q Consensus 234 p~ 235 (478)
+.
T Consensus 237 l~ 238 (374)
T PF10340_consen 237 LV 238 (374)
T ss_pred Cc
Confidence 96
No 62
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.88 E-value=8.8e-05 Score=72.26 Aligned_cols=129 Identities=13% Similarity=0.118 Sum_probs=81.1
Q ss_pred CceEEEEEEEecCCCCCCCceEEeCCCCCh---hh-hhhhhhcccCCeEEcCCCCccccCCCCcc-cccceeeeccCCCc
Q 011738 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGC---SS-VGYGATQEIGPFLVDTDGRGLQFNPYAWN-KEANMLFLESPIGV 148 (478)
Q Consensus 74 ~~~lfy~f~es~~~~~~~P~~lwl~GGPG~---ss-~~~g~~~E~GP~~~~~~~~~~~~n~~sw~-~~~~~l~iD~PvG~ 148 (478)
..++|.|+++... ...+|+||++||-.+- +. + +..+. ..+. .-.+++-+|.| |+
T Consensus 9 ~g~~~~~~~~p~~-~~~~~~VlllHG~g~~~~~~~~~-~~~la------------------~~La~~Gy~Vl~~Dl~-G~ 67 (266)
T TIGR03101 9 HGFRFCLYHPPVA-VGPRGVVIYLPPFAEEMNKSRRM-VALQA------------------RAFAAGGFGVLQIDLY-GC 67 (266)
T ss_pred CCcEEEEEecCCC-CCCceEEEEECCCcccccchhHH-HHHHH------------------HHHHHCCCEEEEECCC-CC
Confidence 3568888887643 2336899999985331 11 1 11111 1122 34699999999 99
Q ss_pred ccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEec
Q 011738 149 GFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLG 228 (478)
Q Consensus 149 GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IG 228 (478)
|.|-..... .+.+...+|+..+++ |++... ..+++|+|+|+||..+..+|.+..+ .++++++.
T Consensus 68 G~S~g~~~~----~~~~~~~~Dv~~ai~-~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~---------~v~~lVL~ 130 (266)
T TIGR03101 68 GDSAGDFAA----ARWDVWKEDVAAAYR-WLIEQG---HPPVTLWGLRLGALLALDAANPLAA---------KCNRLVLW 130 (266)
T ss_pred CCCCCcccc----CCHHHHHHHHHHHHH-HHHhcC---CCCEEEEEECHHHHHHHHHHHhCcc---------ccceEEEe
Confidence 999643221 144455566555443 343322 4589999999999998888755322 38899999
Q ss_pred CCCCCchhhhhh
Q 011738 229 NPETSTAEDWQG 240 (478)
Q Consensus 229 ng~~dp~~~~~~ 240 (478)
+|.++.......
T Consensus 131 ~P~~~g~~~l~~ 142 (266)
T TIGR03101 131 QPVVSGKQQLQQ 142 (266)
T ss_pred ccccchHHHHHH
Confidence 998887644433
No 63
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=97.85 E-value=0.00015 Score=68.03 Aligned_cols=91 Identities=11% Similarity=0.020 Sum_probs=59.0
Q ss_pred cccceeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcC
Q 011738 135 KEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNK 214 (478)
Q Consensus 135 ~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~ 214 (478)
+=+.++.+|.+-+.||+..-....... .-....+|+.++++...+.. .....++.|+|.||||+.+..++.+-
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~-~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~~~----- 85 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGD-WGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAATQH----- 85 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTG-TTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHHHT-----
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhcc-ccccchhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhccc-----
Confidence 346889999886666654321111111 23456778888777665544 44456899999999999888777632
Q ss_pred CCCceeeeeeeEecCCCCCchh
Q 011738 215 DPSLYIDLKGILLGNPETSTAE 236 (478)
Q Consensus 215 ~~~~~inLkGi~IGng~~dp~~ 236 (478)
+-.++.++.++|.+|+..
T Consensus 86 ----~~~f~a~v~~~g~~d~~~ 103 (213)
T PF00326_consen 86 ----PDRFKAAVAGAGVSDLFS 103 (213)
T ss_dssp ----CCGSSEEEEESE-SSTTC
T ss_pred ----ceeeeeeeccceecchhc
Confidence 222789999999988854
No 64
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.70 E-value=6.1e-05 Score=71.79 Aligned_cols=108 Identities=20% Similarity=0.330 Sum_probs=76.3
Q ss_pred CCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccChHHHH
Q 011738 89 QEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTA 168 (478)
Q Consensus 89 ~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a 168 (478)
..-|+++.++|| |.|.+.+..|.- .+..+ -..-++-+|.. |+|-+-..+..+. +.+..+
T Consensus 72 t~gpil~l~HG~-G~S~LSfA~~a~-----------el~s~-----~~~r~~a~DlR-gHGeTk~~~e~dl---S~eT~~ 130 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSFAIFAS-----------ELKSK-----IRCRCLALDLR-GHGETKVENEDDL---SLETMS 130 (343)
T ss_pred CCccEEEEeecC-cccchhHHHHHH-----------HHHhh-----cceeEEEeecc-ccCccccCChhhc---CHHHHH
Confidence 456899999988 999987776651 11111 11234789977 9999987776664 888999
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecC
Q 011738 169 NDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGN 229 (478)
Q Consensus 169 ~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGn 229 (478)
+|+.+.++.+|..-| .+++|+|||+||..+.+.|..= .-.+|-||.+.+
T Consensus 131 KD~~~~i~~~fge~~----~~iilVGHSmGGaIav~~a~~k--------~lpsl~Gl~viD 179 (343)
T KOG2564|consen 131 KDFGAVIKELFGELP----PQIILVGHSMGGAIAVHTAASK--------TLPSLAGLVVID 179 (343)
T ss_pred HHHHHHHHHHhccCC----CceEEEeccccchhhhhhhhhh--------hchhhhceEEEE
Confidence 999999998885332 3699999999998776555321 123488888743
No 65
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.54 E-value=0.00024 Score=66.75 Aligned_cols=118 Identities=14% Similarity=0.055 Sum_probs=63.0
Q ss_pred CCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCCCCcc---cCh
Q 011738 88 PQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEM---LGD 164 (478)
Q Consensus 88 ~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~---~~~ 164 (478)
.+..|+||+|||+++..+. +..-.+ + . .+. + ..-+.+|..|.| |.|.+...- ..+.. ...
T Consensus 10 ~~~~P~vv~lHG~~~~~~~-~~~~~~---~--~----~~a-~----~~g~~Vv~Pd~~-g~~~~~~~~-~~~~~~~~~~~ 72 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASA-YVIDWG---W--K----AAA-D----RYGFVLVAPEQT-SYNSSNNCW-DWFFTHHRARG 72 (212)
T ss_pred CCCCCEEEEeCCCCCCHHH-HhhhcC---h--H----HHH-H----hCCeEEEecCCc-CccccCCCC-CCCCccccCCC
Confidence 4568999999999886554 221000 0 0 000 0 123578888887 655332100 00000 001
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCC
Q 011738 165 DFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (478)
Q Consensus 165 ~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 232 (478)
.....++.++++...+.++ ....+++|+|+|.||..+-.+|.+-.+ .+.++++.+|..
T Consensus 73 ~~~~~~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~~a~~~a~~~p~---------~~~~~~~~~g~~ 130 (212)
T TIGR01840 73 TGEVESLHQLIDAVKANYS-IDPNRVYVTGLSAGGGMTAVLGCTYPD---------VFAGGASNAGLP 130 (212)
T ss_pred CccHHHHHHHHHHHHHhcC-cChhheEEEEECHHHHHHHHHHHhCch---------hheEEEeecCCc
Confidence 1123344444444444442 334689999999999887777654322 277777777653
No 66
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.33 E-value=0.0024 Score=62.58 Aligned_cols=41 Identities=17% Similarity=0.080 Sum_probs=31.7
Q ss_pred CCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 185 YRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 185 ~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
....+++|+|+|+||..+-.+|.+-.+ .+++++..+|+.++
T Consensus 135 ~~~~~~~~~G~S~GG~~a~~~a~~~p~---------~~~~~~~~~~~~~~ 175 (275)
T TIGR02821 135 LDGERQGITGHSMGGHGALVIALKNPD---------RFKSVSAFAPIVAP 175 (275)
T ss_pred CCCCceEEEEEChhHHHHHHHHHhCcc---------cceEEEEECCccCc
Confidence 335689999999999888777765332 27899998998775
No 67
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.33 E-value=0.0019 Score=62.67 Aligned_cols=128 Identities=20% Similarity=0.206 Sum_probs=84.8
Q ss_pred CceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCc
Q 011738 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYS 153 (478)
Q Consensus 74 ~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~ 153 (478)
+..+|.-.......++.+-+|+.++|.=+-||..+--+.. .+. ..-.-+..+|++ |.|.|-+
T Consensus 37 G~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~-----------~l~------~~g~~v~a~D~~-GhG~SdG 98 (313)
T KOG1455|consen 37 GAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAK-----------RLA------KSGFAVYAIDYE-GHGRSDG 98 (313)
T ss_pred CCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHH-----------HHH------hCCCeEEEeecc-CCCcCCC
Confidence 5678877766555556777888888875544321221110 111 112357789999 9999975
Q ss_pred cCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCC
Q 011738 154 NTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (478)
Q Consensus 154 ~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 232 (478)
- ..+.. +.+.+.+|+..|+..+- ...++++.|.|++|||+||..+-.++.+ + +--..|+++..|..
T Consensus 99 l--~~yi~-~~d~~v~D~~~~~~~i~-~~~e~~~lp~FL~GeSMGGAV~Ll~~~k--~-------p~~w~G~ilvaPmc 164 (313)
T KOG1455|consen 99 L--HAYVP-SFDLVVDDVISFFDSIK-EREENKGLPRFLFGESMGGAVALLIALK--D-------PNFWDGAILVAPMC 164 (313)
T ss_pred C--cccCC-cHHHHHHHHHHHHHHHh-hccccCCCCeeeeecCcchHHHHHHHhh--C-------Ccccccceeeeccc
Confidence 4 33444 78888999888877644 4567778999999999999877766655 2 11277877776653
No 68
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.26 E-value=0.0095 Score=58.65 Aligned_cols=89 Identities=18% Similarity=0.138 Sum_probs=58.6
Q ss_pred cCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccCh
Q 011738 85 MTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGD 164 (478)
Q Consensus 85 ~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~ 164 (478)
..+....|.++.++|==|.--. +.-+. . .+...- -+.++-||.- ..|.|..... . +.
T Consensus 46 ~~~~~~~Pp~i~lHGl~GS~~N-w~sv~------k-----~Ls~~l-----~~~v~~vd~R-nHG~Sp~~~~----h-~~ 102 (315)
T KOG2382|consen 46 SENLERAPPAIILHGLLGSKEN-WRSVA------K-----NLSRKL-----GRDVYAVDVR-NHGSSPKITV----H-NY 102 (315)
T ss_pred ccccCCCCceEEecccccCCCC-HHHHH------H-----Hhcccc-----cCceEEEecc-cCCCCccccc----c-CH
Confidence 3467788999999986554322 22221 0 011111 1278889987 9999964332 2 67
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCc
Q 011738 165 DFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAG 199 (478)
Q Consensus 165 ~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG 199 (478)
+..|+|+..|+..+-. .++..+..|.|||+||
T Consensus 103 ~~ma~dv~~Fi~~v~~---~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 103 EAMAEDVKLFIDGVGG---STRLDPVVLLGHSMGG 134 (315)
T ss_pred HHHHHHHHHHHHHccc---ccccCCceecccCcch
Confidence 7889998888876543 3456789999999999
No 69
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.21 E-value=0.026 Score=60.33 Aligned_cols=84 Identities=8% Similarity=0.004 Sum_probs=52.9
Q ss_pred cceeeeccCCCcccCCccCCCCCcccCh-HHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCC
Q 011738 137 ANMLFLESPIGVGFSYSNTTNDYEMLGD-DFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKD 215 (478)
Q Consensus 137 ~~~l~iD~PvG~GfSy~~~~~~~~~~~~-~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~ 215 (478)
..++-||-+ |.|.|.... +. +-+.+.+.++|..+.+.. ...+++++|+|.||..+...+..+....
T Consensus 221 f~V~~iDwr-gpg~s~~~~-------~~ddY~~~~i~~al~~v~~~~---g~~kv~lvG~cmGGtl~a~ala~~aa~~-- 287 (532)
T TIGR01838 221 HTVFVISWR-NPDASQADK-------TFDDYIRDGVIAALEVVEAIT---GEKQVNCVGYCIGGTLLSTALAYLAARG-- 287 (532)
T ss_pred cEEEEEECC-CCCcccccC-------ChhhhHHHHHHHHHHHHHHhc---CCCCeEEEEECcCcHHHHHHHHHHHHhC--
Confidence 578889987 888774321 22 223344666666655533 3668999999999998765333222221
Q ss_pred CCceeeeeeeEecCCCCCch
Q 011738 216 PSLYIDLKGILLGNPETSTA 235 (478)
Q Consensus 216 ~~~~inLkGi~IGng~~dp~ 235 (478)
..-.++++++.+..+|..
T Consensus 288 --~~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 288 --DDKRIKSATFFTTLLDFS 305 (532)
T ss_pred --CCCccceEEEEecCcCCC
Confidence 011388888888888864
No 70
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.13 E-value=0.00053 Score=67.31 Aligned_cols=113 Identities=12% Similarity=0.152 Sum_probs=69.1
Q ss_pred CCCCCceEEeCCCCChh-hhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccChHH
Q 011738 88 PQEKPLVLWLNGGPGCS-SVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDF 166 (478)
Q Consensus 88 ~~~~P~~lwl~GGPG~s-s~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~ 166 (478)
..+.|++|+++|-.|.. .. +-. .+. +.+.-....|+|.+|.+.+..-.|.. ...+...
T Consensus 33 ~~~~p~vilIHG~~~~~~~~-~~~--------------~l~-~~ll~~~~~nVi~vD~~~~~~~~y~~-----a~~~~~~ 91 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEES-WIS--------------DLR-KAYLSRGDYNVIVVDWGRGANPNYPQ-----AVNNTRV 91 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCc-HHH--------------HHH-HHHHhcCCCEEEEEECccccccChHH-----HHHhHHH
Confidence 34579999999987754 22 100 000 11111245899999988431111111 0114556
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCC
Q 011738 167 TANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (478)
Q Consensus 167 ~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 231 (478)
+++++..+|+...+.. .....+++|+|+|+||+.+-.+|.++.+ +++.|+..+|.
T Consensus 92 v~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~---------~v~~iv~LDPa 146 (275)
T cd00707 92 VGAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG---------KLGRITGLDPA 146 (275)
T ss_pred HHHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC---------ccceeEEecCC
Confidence 6777777777665542 2334689999999999999888877633 28888887765
No 71
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=97.08 E-value=0.017 Score=58.67 Aligned_cols=63 Identities=13% Similarity=0.097 Sum_probs=47.3
Q ss_pred HcCCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCcccccCCCh---HHHH
Q 011738 385 EAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHAVPVFKP---SDSL 461 (478)
Q Consensus 385 ~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHmvP~dqP---~~a~ 461 (478)
+-..+||+.+|..|.+++...++.+.+.+.= ...++.++ .+||+.+.+.| +.+.
T Consensus 284 ~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~----------------------~~~~~~~~-~~gH~~~~~~~~~~~~v~ 340 (350)
T TIGR01836 284 NIKMPILNIYAERDHLVPPDASKALNDLVSS----------------------EDYTELSF-PGGHIGIYVSGKAQKEVP 340 (350)
T ss_pred hCCCCeEEEecCCCCcCCHHHHHHHHHHcCC----------------------CCeEEEEc-CCCCEEEEECchhHhhhh
Confidence 3368999999999999999999888887650 13344444 58999998866 5666
Q ss_pred HHHHHHHcC
Q 011738 462 ALFSSFLLG 470 (478)
Q Consensus 462 ~mi~~fl~~ 470 (478)
.-+.+|+..
T Consensus 341 ~~i~~wl~~ 349 (350)
T TIGR01836 341 PAIGKWLQA 349 (350)
T ss_pred HHHHHHHHh
Confidence 777777753
No 72
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=97.06 E-value=0.0014 Score=68.15 Aligned_cols=81 Identities=15% Similarity=0.125 Sum_probs=55.2
Q ss_pred ccceeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCC
Q 011738 136 EANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKD 215 (478)
Q Consensus 136 ~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~ 215 (478)
.+|+|-+|.| |.|-|.-..... +...+|+++.++|+...+.. .+.-.+++|+|+|+|||.+-.+|.+...
T Consensus 73 d~nVI~VDw~-g~g~s~y~~a~~----~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~p~---- 142 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQHYPTSAA----YTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLTKH---- 142 (442)
T ss_pred CCEEEEEECC-CcCCCCCccccc----cHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhCCc----
Confidence 4799999999 767553221111 45677788777776554333 2445689999999999988887764322
Q ss_pred CCceeeeeeeEecCCC
Q 011738 216 PSLYIDLKGILLGNPE 231 (478)
Q Consensus 216 ~~~~inLkGi~IGng~ 231 (478)
.|.+|++.+|.
T Consensus 143 -----rV~rItgLDPA 153 (442)
T TIGR03230 143 -----KVNRITGLDPA 153 (442)
T ss_pred -----ceeEEEEEcCC
Confidence 27888887774
No 73
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=96.99 E-value=0.0044 Score=57.23 Aligned_cols=122 Identities=20% Similarity=0.321 Sum_probs=82.2
Q ss_pred ceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCcc
Q 011738 75 RALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSN 154 (478)
Q Consensus 75 ~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~ 154 (478)
-.|.=|...+++ +.|++|.++|-.|- +|.+.-+ .+ .... +=..|++-++-. |.|.|.+.
T Consensus 65 vtL~a~~~~~E~---S~pTlLyfh~NAGN----mGhr~~i------~~--~fy~-----~l~mnv~ivsYR-GYG~S~Gs 123 (300)
T KOG4391|consen 65 VTLDAYLMLSES---SRPTLLYFHANAGN----MGHRLPI------AR--VFYV-----NLKMNVLIVSYR-GYGKSEGS 123 (300)
T ss_pred eeEeeeeecccC---CCceEEEEccCCCc----ccchhhH------HH--HHHH-----HcCceEEEEEee-ccccCCCC
Confidence 445555444443 88999999988665 3444311 00 0111 234689999977 99999876
Q ss_pred CCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 155 TTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 155 ~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
.... .....|+...+.| -..|....++++++|.|-||.-+-.+|.+-.++ +.++++-|-+++=
T Consensus 124 psE~----GL~lDs~avldyl----~t~~~~dktkivlfGrSlGGAvai~lask~~~r---------i~~~ivENTF~SI 186 (300)
T KOG4391|consen 124 PSEE----GLKLDSEAVLDYL----MTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDR---------ISAIIVENTFLSI 186 (300)
T ss_pred cccc----ceeccHHHHHHHH----hcCccCCcceEEEEecccCCeeEEEeeccchhh---------eeeeeeechhccc
Confidence 5432 2222333333333 478889899999999999999999998876554 8999999988764
No 74
>PLN02442 S-formylglutathione hydrolase
Probab=96.98 E-value=0.0026 Score=62.72 Aligned_cols=57 Identities=16% Similarity=0.089 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCch
Q 011738 167 TANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (478)
Q Consensus 167 ~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~ 235 (478)
..+++...+..++.. ....+++|+|+|+||+-+-.+|.+-.+. +++++..+|..++.
T Consensus 125 ~~~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~~p~~---------~~~~~~~~~~~~~~ 181 (283)
T PLN02442 125 VVKELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLKNPDK---------YKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHhCchh---------EEEEEEECCccCcc
Confidence 345555566665543 3456799999999998777777653322 88999999987753
No 75
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=96.72 E-value=0.004 Score=67.33 Aligned_cols=129 Identities=17% Similarity=0.132 Sum_probs=78.5
Q ss_pred CceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCc-ccccceeeeccCCCcccCC
Q 011738 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAW-NKEANMLFLESPIGVGFSY 152 (478)
Q Consensus 74 ~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw-~~~~~~l~iD~PvG~GfSy 152 (478)
+..|+..+|... +.+..|+||.++|-...+.. .... + . ....-| .+-+.++-+|.+ |+|.|-
T Consensus 6 G~~L~~~~~~P~-~~~~~P~Il~~~gyg~~~~~-~~~~-~------------~-~~~~~l~~~Gy~vv~~D~R-G~g~S~ 68 (550)
T TIGR00976 6 GTRLAIDVYRPA-GGGPVPVILSRTPYGKDAGL-RWGL-D------------K-TEPAWFVAQGYAVVIQDTR-GRGASE 68 (550)
T ss_pred CCEEEEEEEecC-CCCCCCEEEEecCCCCchhh-cccc-c------------c-ccHHHHHhCCcEEEEEecc-ccccCC
Confidence 567877666433 24467999999975332211 0000 0 0 001112 235789999988 999996
Q ss_pred ccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCC
Q 011738 153 SNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (478)
Q Consensus 153 ~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 232 (478)
+.... . + ...++|+.++++ |+.+.| +.+.++.++|+||||..+-.+|..- +-.|++++..++..
T Consensus 69 g~~~~-~---~-~~~~~D~~~~i~-~l~~q~-~~~~~v~~~G~S~GG~~a~~~a~~~---------~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 69 GEFDL-L---G-SDEAADGYDLVD-WIAKQP-WCDGNVGMLGVSYLAVTQLLAAVLQ---------PPALRAIAPQEGVW 132 (550)
T ss_pred CceEe-c---C-cccchHHHHHHH-HHHhCC-CCCCcEEEEEeChHHHHHHHHhccC---------CCceeEEeecCccc
Confidence 54221 1 2 345666666665 555554 3356899999999997666555421 22499999999987
Q ss_pred Cch
Q 011738 233 STA 235 (478)
Q Consensus 233 dp~ 235 (478)
|..
T Consensus 133 d~~ 135 (550)
T TIGR00976 133 DLY 135 (550)
T ss_pred chh
Confidence 754
No 76
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.67 E-value=0.013 Score=58.76 Aligned_cols=137 Identities=15% Similarity=0.175 Sum_probs=87.0
Q ss_pred CCceEEEEEEEecCC-C-CCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcc-cccceeeeccCCCcc
Q 011738 73 NGRALFYWFYEAMTR-P-QEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWN-KEANMLFLESPIGVG 149 (478)
Q Consensus 73 ~~~~lfy~f~es~~~-~-~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~-~~~~~l~iD~PvG~G 149 (478)
....++.+.|..... + ..+|++||+|||=-|-+.. . .....+--.+. +..+.+-| .++
T Consensus 70 ~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~---~------------~~~y~~~~~~~a~~~~~vvv----SVd 130 (336)
T KOG1515|consen 70 PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSA---N------------SPAYDSFCTRLAAELNCVVV----SVD 130 (336)
T ss_pred CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCC---C------------CchhHHHHHHHHHHcCeEEE----ecC
Confidence 357799999987654 3 5899999999996663320 0 01111112222 45566554 355
Q ss_pred cCCccCCCCCcccChHHHHHHHHHHHHH-HHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEec
Q 011738 150 FSYSNTTNDYEMLGDDFTANDSYTFLHK-WFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLG 228 (478)
Q Consensus 150 fSy~~~~~~~~~~~~~~~a~~~~~~l~~-F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IG 228 (478)
|--+.. ..++. .-++.-+.+..+++. |.+..-... .++|+|.|-||-.+-.+|.++.+.. ...+.|+|+++.
T Consensus 131 YRLAPE-h~~Pa-~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~---~~~~ki~g~ili 203 (336)
T KOG1515|consen 131 YRLAPE-HPFPA-AYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK---LSKPKIKGQILI 203 (336)
T ss_pred cccCCC-CCCCc-cchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc---CCCcceEEEEEE
Confidence 554432 23333 444444445555555 666554443 4999999999999999999998753 135779999998
Q ss_pred CCCCCch
Q 011738 229 NPETSTA 235 (478)
Q Consensus 229 ng~~dp~ 235 (478)
-|++...
T Consensus 204 ~P~~~~~ 210 (336)
T KOG1515|consen 204 YPFFQGT 210 (336)
T ss_pred ecccCCC
Confidence 8887654
No 77
>PLN00021 chlorophyllase
Probab=96.45 E-value=0.0062 Score=60.87 Aligned_cols=116 Identities=16% Similarity=0.136 Sum_probs=69.0
Q ss_pred CCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccChHHH
Q 011738 88 PQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFT 167 (478)
Q Consensus 88 ~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~ 167 (478)
..+.|+|||+||+.+.... +..+.+ .+. +| -+.++.+|.+ | ++..... .+.+.
T Consensus 49 ~g~~PvVv~lHG~~~~~~~-y~~l~~-----------~La----s~--G~~VvapD~~-g--~~~~~~~------~~i~d 101 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSF-YSQLLQ-----------HIA----SH--GFIVVAPQLY-T--LAGPDGT------DEIKD 101 (313)
T ss_pred CCCCCEEEEECCCCCCccc-HHHHHH-----------HHH----hC--CCEEEEecCC-C--cCCCCch------hhHHH
Confidence 4578999999999776554 433321 111 11 2577888876 4 2211110 22233
Q ss_pred HHHHHHHHHHHHHh-CC---CCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 168 ANDSYTFLHKWFLK-FP---SYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 168 a~~~~~~l~~F~~~-fp---~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
+.++.+++.+-++. .| +....+++|+|||+||..+-.+|.+..+.. ....+++++..+|+...
T Consensus 102 ~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~----~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 102 AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS----LPLKFSALIGLDPVDGT 168 (313)
T ss_pred HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc----cccceeeEEeecccccc
Confidence 55566666654332 12 233467999999999998888887654321 12458899888886543
No 78
>PRK13604 luxD acyl transferase; Provisional
Probab=96.39 E-value=0.07 Score=52.88 Aligned_cols=48 Identities=13% Similarity=0.154 Sum_probs=40.3
Q ss_pred cCCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCcccccCC
Q 011738 386 AGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHAVPVF 455 (478)
Q Consensus 386 ~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHmvP~d 455 (478)
-..+||+++|+.|.+||..+++.+.++++ .++-.+..+.||+|.....
T Consensus 201 l~~PvLiIHG~~D~lVp~~~s~~l~e~~~----------------------s~~kkl~~i~Ga~H~l~~~ 248 (307)
T PRK13604 201 LDIPFIAFTANNDSWVKQSEVIDLLDSIR----------------------SEQCKLYSLIGSSHDLGEN 248 (307)
T ss_pred cCCCEEEEEcCCCCccCHHHHHHHHHHhc----------------------cCCcEEEEeCCCccccCcc
Confidence 35999999999999999999999998864 1356779999999987643
No 79
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.39 E-value=0.014 Score=48.27 Aligned_cols=65 Identities=29% Similarity=0.351 Sum_probs=57.0
Q ss_pred CCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCcccccCCChHHHHHHHHH
Q 011738 387 GLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHAVPVFKPSDSLALFSS 466 (478)
Q Consensus 387 ~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHmvP~dqP~~a~~mi~~ 466 (478)
..+||+.+|..|.++|+.+++...+.|. +-..+++.++||-+-...-..+.+++.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~------------------------~s~lvt~~g~gHg~~~~~s~C~~~~v~~ 89 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP------------------------GSRLVTVDGAGHGVYAGGSPCVDKAVDD 89 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC------------------------CceEEEEeccCcceecCCChHHHHHHHH
Confidence 3899999999999999999999999976 4567999999999987555688999999
Q ss_pred HHcCCCCCC
Q 011738 467 FLLGDPLPS 475 (478)
Q Consensus 467 fl~~~~~~~ 475 (478)
||..-.+|.
T Consensus 90 yl~~G~lP~ 98 (103)
T PF08386_consen 90 YLLDGTLPA 98 (103)
T ss_pred HHHcCCCCC
Confidence 998877775
No 80
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.35 E-value=0.021 Score=54.03 Aligned_cols=81 Identities=12% Similarity=0.173 Sum_probs=56.3
Q ss_pred ccceeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCC
Q 011738 136 EANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKD 215 (478)
Q Consensus 136 ~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~ 215 (478)
..-++-|+-| |-|--+....- + +.++.|+.+...|+. -+..+|+-++|||+||..+=.+|.++.+.-
T Consensus 33 ~iel~avqlP-GR~~r~~ep~~---~-di~~Lad~la~el~~------~~~d~P~alfGHSmGa~lAfEvArrl~~~g-- 99 (244)
T COG3208 33 DIELLAVQLP-GRGDRFGEPLL---T-DIESLADELANELLP------PLLDAPFALFGHSMGAMLAFEVARRLERAG-- 99 (244)
T ss_pred hhheeeecCC-CcccccCCccc---c-cHHHHHHHHHHHhcc------ccCCCCeeecccchhHHHHHHHHHHHHHcC--
Confidence 3567889999 88866544322 2 677777777766652 345889999999999999999999987752
Q ss_pred CCceeeeeeeEecCCCCCc
Q 011738 216 PSLYIDLKGILLGNPETST 234 (478)
Q Consensus 216 ~~~~inLkGi~IGng~~dp 234 (478)
...+++.| +|.--|
T Consensus 100 ----~~p~~lfi-sg~~aP 113 (244)
T COG3208 100 ----LPPRALFI-SGCRAP 113 (244)
T ss_pred ----CCcceEEE-ecCCCC
Confidence 22555544 444455
No 81
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=96.27 E-value=0.017 Score=54.38 Aligned_cols=101 Identities=15% Similarity=0.187 Sum_probs=70.2
Q ss_pred ceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCccc-ccceeeeccCCCcccCCccCCCCCcccChHHHHHHH
Q 011738 93 LVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNK-EANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDS 171 (478)
Q Consensus 93 ~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~-~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~ 171 (478)
.|+++++|=|.++. |--|.. .. .. ..++..|+.| |.+-. .... .+.++.|+..
T Consensus 2 ~lf~~p~~gG~~~~-y~~la~------------~l------~~~~~~v~~i~~~-~~~~~-----~~~~-~si~~la~~y 55 (229)
T PF00975_consen 2 PLFCFPPAGGSASS-YRPLAR------------AL------PDDVIGVYGIEYP-GRGDD-----EPPP-DSIEELASRY 55 (229)
T ss_dssp EEEEESSTTCSGGG-GHHHHH------------HH------TTTEEEEEEECST-TSCTT-----SHEE-SSHHHHHHHH
T ss_pred eEEEEcCCccCHHH-HHHHHH------------hC------CCCeEEEEEEecC-CCCCC-----CCCC-CCHHHHHHHH
Confidence 57888888676555 443331 11 11 4678999988 77611 1111 2788888888
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCC
Q 011738 172 YTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (478)
Q Consensus 172 ~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 231 (478)
.+.|+. ..| ..|++|+|+|+||..+-.+|.++.++. .....|++.++.
T Consensus 56 ~~~I~~---~~~---~gp~~L~G~S~Gg~lA~E~A~~Le~~G------~~v~~l~liD~~ 103 (229)
T PF00975_consen 56 AEAIRA---RQP---EGPYVLAGWSFGGILAFEMARQLEEAG------EEVSRLILIDSP 103 (229)
T ss_dssp HHHHHH---HTS---SSSEEEEEETHHHHHHHHHHHHHHHTT-------SESEEEEESCS
T ss_pred HHHhhh---hCC---CCCeeehccCccHHHHHHHHHHHHHhh------hccCceEEecCC
Confidence 777763 444 339999999999999999999998874 448899998865
No 82
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=96.25 E-value=0.34 Score=51.33 Aligned_cols=87 Identities=21% Similarity=0.297 Sum_probs=63.7
Q ss_pred hHHHHHHHHHcCCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEe-CCeEEEEEcCCcccc--
Q 011738 376 VLPIYTKLIEAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEY-AGLTFVTVRGAGHAV-- 452 (478)
Q Consensus 376 ~~~~l~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~-~~ltf~~V~~AGHmv-- 452 (478)
.-+.|....++|=|+|+|||..|.+++..++.++-+++.= ..+|-.... +-+-|..|.|.||--
T Consensus 342 ~~pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~-------------~~g~~~~~v~dF~RlF~vPGm~HC~gG 408 (474)
T PF07519_consen 342 TDPDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVA-------------RMGGALADVDDFYRLFMVPGMGHCGGG 408 (474)
T ss_pred CCcCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHH-------------hcccccccccceeEEEecCCCcccCCC
Confidence 3356777778999999999999999999999999888641 111110111 125578999999985
Q ss_pred cCCChHHHHHHHHHHHcCCCCCC
Q 011738 453 PVFKPSDSLALFSSFLLGDPLPS 475 (478)
Q Consensus 453 P~dqP~~a~~mi~~fl~~~~~~~ 475 (478)
|-..|-.++.-+.+|+.+..-|+
T Consensus 409 ~g~~~~d~l~aL~~WVE~G~AP~ 431 (474)
T PF07519_consen 409 PGPDPFDALTALVDWVENGKAPE 431 (474)
T ss_pred CCCCCCCHHHHHHHHHhCCCCCC
Confidence 44466789999999998765554
No 83
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.04 E-value=0.068 Score=51.96 Aligned_cols=125 Identities=20% Similarity=0.254 Sum_probs=74.6
Q ss_pred CceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccc-----eeeecc----
Q 011738 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEAN-----MLFLES---- 144 (478)
Q Consensus 74 ~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~-----~l~iD~---- 144 (478)
+...-||+|.-..-++.+||+|.|||+=|..+. .- +-..|++.|. |+|-|+
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag-~~-------------------~~sg~d~lAd~~gFlV~yPdg~~~~ 103 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAG-QL-------------------HGTGWDALADREGFLVAYPDGYDRA 103 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHH-hh-------------------cccchhhhhcccCcEEECcCccccc
Confidence 456779998877778888999999998665443 11 3334554433 344431
Q ss_pred --CCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeee
Q 011738 145 --PIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDL 222 (478)
Q Consensus 145 --PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inL 222 (478)
|-+.|-++...+.- . ..+ .+..+.+.+.....+| ......+||+|-|-||..+-.++..-.+. +
T Consensus 104 wn~~~~~~~~~p~~~~--~-g~d-dVgflr~lva~l~~~~-gidp~RVyvtGlS~GG~Ma~~lac~~p~~---------f 169 (312)
T COG3509 104 WNANGCGNWFGPADRR--R-GVD-DVGFLRALVAKLVNEY-GIDPARVYVTGLSNGGRMANRLACEYPDI---------F 169 (312)
T ss_pred cCCCcccccCCccccc--C-Ccc-HHHHHHHHHHHHHHhc-CcCcceEEEEeeCcHHHHHHHHHhcCccc---------c
Confidence 33445454332111 0 122 2223333333333434 23355899999999999888887654333 8
Q ss_pred eeeEecCCCC
Q 011738 223 KGILLGNPET 232 (478)
Q Consensus 223 kGi~IGng~~ 232 (478)
.+|++..|..
T Consensus 170 aa~A~VAg~~ 179 (312)
T COG3509 170 AAIAPVAGLL 179 (312)
T ss_pred cceeeeeccc
Confidence 8888888876
No 84
>PRK10115 protease 2; Provisional
Probab=95.92 E-value=0.015 Score=64.57 Aligned_cols=140 Identities=13% Similarity=0.056 Sum_probs=78.5
Q ss_pred EeecCCCceEEEEEEEecC--CCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccC
Q 011738 68 TVNEHNGRALFYWFYEAMT--RPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESP 145 (478)
Q Consensus 68 ~~~~~~~~~lfy~f~es~~--~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~P 145 (478)
.+....|..+-.|++-... .....|++|+.+||||.+.. -+... .--+|....=++.+=.+
T Consensus 420 ~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~-p~f~~----------------~~~~l~~rG~~v~~~n~ 482 (686)
T PRK10115 420 WITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASID-ADFSF----------------SRLSLLDRGFVYAIVHV 482 (686)
T ss_pred EEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCC-CCccH----------------HHHHHHHCCcEEEEEEc
Confidence 3333446677766554322 23456999999999998865 22111 11235555444444445
Q ss_pred CCcccCCccCC--CCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeee
Q 011738 146 IGVGFSYSNTT--NDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLK 223 (478)
Q Consensus 146 vG~GfSy~~~~--~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLk 223 (478)
-|.| .|+..- .+... .-...-+|+.++.+...+. .--...++.|.|-||||..+-.++.+-.+ -++
T Consensus 483 RGs~-g~G~~w~~~g~~~-~k~~~~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG~l~~~~~~~~Pd---------lf~ 550 (686)
T PRK10115 483 RGGG-ELGQQWYEDGKFL-KKKNTFNDYLDACDALLKL-GYGSPSLCYGMGGSAGGMLMGVAINQRPE---------LFH 550 (686)
T ss_pred CCCC-ccCHHHHHhhhhh-cCCCcHHHHHHHHHHHHHc-CCCChHHeEEEEECHHHHHHHHHHhcChh---------hee
Confidence 5544 333210 00000 1113355666666544433 22235679999999999866555533222 299
Q ss_pred eeEecCCCCCchh
Q 011738 224 GILLGNPETSTAE 236 (478)
Q Consensus 224 Gi~IGng~~dp~~ 236 (478)
.++.+.|++|...
T Consensus 551 A~v~~vp~~D~~~ 563 (686)
T PRK10115 551 GVIAQVPFVDVVT 563 (686)
T ss_pred EEEecCCchhHhh
Confidence 9999999998854
No 85
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=95.90 E-value=0.011 Score=51.16 Aligned_cols=94 Identities=20% Similarity=0.293 Sum_probs=60.6
Q ss_pred ceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccChHHHHHHHH
Q 011738 93 LVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSY 172 (478)
Q Consensus 93 ~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~ 172 (478)
+||+++|+.|.... +..+.+ .+. .+-.+++.+|.| |.|.+.. ...+++++
T Consensus 1 ~vv~~HG~~~~~~~-~~~~~~-----------~l~------~~G~~v~~~~~~-~~~~~~~-----------~~~~~~~~ 50 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD-YQPLAE-----------ALA------EQGYAVVAFDYP-GHGDSDG-----------ADAVERVL 50 (145)
T ss_dssp EEEEECTTTTTTHH-HHHHHH-----------HHH------HTTEEEEEESCT-TSTTSHH-----------SHHHHHHH
T ss_pred CEEEECCCCCCHHH-HHHHHH-----------HHH------HCCCEEEEEecC-CCCccch-----------hHHHHHHH
Confidence 58999999776555 544442 111 123688999988 8886611 11333444
Q ss_pred HHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCC
Q 011738 173 TFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (478)
Q Consensus 173 ~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 231 (478)
+.+. ...+ ..++++|+|+|.||..+..++.+- . .+++++..+|+
T Consensus 51 ~~~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~-~---------~v~~~v~~~~~ 94 (145)
T PF12695_consen 51 ADIR---AGYP--DPDRIILIGHSMGGAIAANLAARN-P---------RVKAVVLLSPY 94 (145)
T ss_dssp HHHH---HHHC--TCCEEEEEEETHHHHHHHHHHHHS-T---------TESEEEEESES
T ss_pred HHHH---hhcC--CCCcEEEEEEccCcHHHHHHhhhc-c---------ceeEEEEecCc
Confidence 4332 2233 357999999999999888777643 2 28899998883
No 86
>PRK10162 acetyl esterase; Provisional
Probab=95.88 E-value=0.022 Score=57.09 Aligned_cols=62 Identities=13% Similarity=0.078 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 169 NDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 169 ~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
.+.++++.+.-+.+. ....+++|+|+|.||+.+..+|.++.+... ....++|+++..|+++.
T Consensus 136 ~~a~~~l~~~~~~~~-~d~~~i~l~G~SaGG~la~~~a~~~~~~~~---~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 136 VAVCCYFHQHAEDYG-INMSRIGFAGDSAGAMLALASALWLRDKQI---DCGKVAGVLLWYGLYGL 197 (318)
T ss_pred HHHHHHHHHhHHHhC-CChhHEEEEEECHHHHHHHHHHHHHHhcCC---CccChhheEEECCccCC
Confidence 334444444333321 224589999999999999999987765421 12457889998888764
No 87
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=95.88 E-value=0.074 Score=51.85 Aligned_cols=93 Identities=14% Similarity=0.212 Sum_probs=54.7
Q ss_pred cccccceeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHh
Q 011738 133 WNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDR 212 (478)
Q Consensus 133 w~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~ 212 (478)
..+++-++=||.| |-..--..-..++.--+.++.|+++-+.|+.|= =+.++-+|+--|+.....+|..-.++
T Consensus 52 i~~~f~i~Hi~aP-Gqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~-------lk~vIg~GvGAGAnIL~rfAl~~p~~ 123 (283)
T PF03096_consen 52 ILQNFCIYHIDAP-GQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFG-------LKSVIGFGVGAGANILARFALKHPER 123 (283)
T ss_dssp HHTTSEEEEEE-T-TTSTT-----TT-----HHHHHCTHHHHHHHHT----------EEEEEETHHHHHHHHHHHHSGGG
T ss_pred HhhceEEEEEeCC-CCCCCcccccccccccCHHHHHHHHHHHHHhCC-------ccEEEEEeeccchhhhhhccccCccc
Confidence 4566788999999 887654433444322278899999888777432 34699999998888777788654443
Q ss_pred cCCCCceeeeeeeEecCCCCCchhhhhhhHHHhh
Q 011738 213 NKDPSLYIDLKGILLGNPETSTAEDWQGLVDYAW 246 (478)
Q Consensus 213 n~~~~~~inLkGi~IGng~~dp~~~~~~~~~~a~ 246 (478)
+-|+++.|+.... .++.+.++
T Consensus 124 ---------V~GLiLvn~~~~~----~gw~Ew~~ 144 (283)
T PF03096_consen 124 ---------VLGLILVNPTCTA----AGWMEWFY 144 (283)
T ss_dssp ---------EEEEEEES---S-------HHHHHH
T ss_pred ---------eeEEEEEecCCCC----ccHHHHHH
Confidence 8999997775443 45555554
No 88
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=95.81 E-value=0.095 Score=58.78 Aligned_cols=85 Identities=13% Similarity=0.141 Sum_probs=55.2
Q ss_pred ccccceeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhC--------------CCCCCCcEEEEeccCCc
Q 011738 134 NKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKF--------------PSYRRRTFYIAGESYAG 199 (478)
Q Consensus 134 ~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~f--------------p~~~~~~~~i~GeSYgG 199 (478)
.+=+.++++|.+ |+|-|-+..... + .+..+|..+.+. |+... -.+.+-++-++|.||||
T Consensus 277 ~rGYaVV~~D~R-Gtg~SeG~~~~~----~-~~E~~D~~~vIe-Wl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 277 PRGFAVVYVSGI-GTRGSDGCPTTG----D-YQEIESMKAVID-WLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred hCCeEEEEEcCC-CCCCCCCcCccC----C-HHHHHHHHHHHH-HHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 345889999977 999997653221 1 223344433333 44421 22445689999999999
Q ss_pred cchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 200 RYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 200 ~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
...-.+|..- +-.||.|+-..|+.+.
T Consensus 350 ~~~~~aAa~~---------pp~LkAIVp~a~is~~ 375 (767)
T PRK05371 350 TLPNAVATTG---------VEGLETIIPEAAISSW 375 (767)
T ss_pred HHHHHHHhhC---------CCcceEEEeeCCCCcH
Confidence 8777776532 2349999998888764
No 89
>PRK11071 esterase YqiA; Provisional
Probab=95.66 E-value=0.013 Score=54.13 Aligned_cols=54 Identities=15% Similarity=0.116 Sum_probs=43.9
Q ss_pred CCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCcccccCCChHHHHHHHHH
Q 011738 387 GLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHAVPVFKPSDSLALFSS 466 (478)
Q Consensus 387 ~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHmvP~dqP~~a~~mi~~ 466 (478)
..+|+|.+|..|-++|+..+.+..++. ..+++.||+|.- ...+..++.+..
T Consensus 136 ~~~v~iihg~~De~V~~~~a~~~~~~~---------------------------~~~~~~ggdH~f--~~~~~~~~~i~~ 186 (190)
T PRK11071 136 PDLIWLLQQTGDEVLDYRQAVAYYAAC---------------------------RQTVEEGGNHAF--VGFERYFNQIVD 186 (190)
T ss_pred hhhEEEEEeCCCCcCCHHHHHHHHHhc---------------------------ceEEECCCCcch--hhHHHhHHHHHH
Confidence 468999999999999999888876642 345779999998 344889999999
Q ss_pred HHc
Q 011738 467 FLL 469 (478)
Q Consensus 467 fl~ 469 (478)
|++
T Consensus 187 fl~ 189 (190)
T PRK11071 187 FLG 189 (190)
T ss_pred Hhc
Confidence 974
No 90
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=95.62 E-value=0.0056 Score=62.61 Aligned_cols=83 Identities=19% Similarity=0.183 Sum_probs=54.4
Q ss_pred cccceeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcC
Q 011738 135 KEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNK 214 (478)
Q Consensus 135 ~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~ 214 (478)
.-.+||=||-| |+|+|.... . + +..+.++..+..++...|+.-..++.++|-|.||.|++.+|..=.++
T Consensus 217 rGiA~LtvDmP-G~G~s~~~~---l---~--~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~R-- 285 (411)
T PF06500_consen 217 RGIAMLTVDMP-GQGESPKWP---L---T--QDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPR-- 285 (411)
T ss_dssp CT-EEEEE--T-TSGGGTTT----S------S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT--
T ss_pred CCCEEEEEccC-CCcccccCC---C---C--cCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccc--
Confidence 34589999999 999984321 1 1 11234566666777788988888999999999999999998642222
Q ss_pred CCCceeeeeeeEecCCCCCch
Q 011738 215 DPSLYIDLKGILLGNPETSTA 235 (478)
Q Consensus 215 ~~~~~inLkGi~IGng~~dp~ 235 (478)
||+++.-.|.++..
T Consensus 286 -------lkavV~~Ga~vh~~ 299 (411)
T PF06500_consen 286 -------LKAVVALGAPVHHF 299 (411)
T ss_dssp --------SEEEEES---SCG
T ss_pred -------eeeEeeeCchHhhh
Confidence 89987777766553
No 91
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=95.54 E-value=0.054 Score=52.88 Aligned_cols=119 Identities=18% Similarity=0.266 Sum_probs=80.6
Q ss_pred CCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCC----CCcccChHH
Q 011738 91 KPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTN----DYEMLGDDF 166 (478)
Q Consensus 91 ~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~----~~~~~~~~~ 166 (478)
+++++|+-|=||..+. |--|.+ .+..+- +....++=+... |+|...... +...++.++
T Consensus 2 ~~li~~IPGNPGlv~f-Y~~Fl~-----------~L~~~l---~~~~~i~~ish~---Gh~~~~~~~~~~~~~~~~sL~~ 63 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-YEEFLS-----------ALYEKL---NPQFEILGISHA---GHSTSPSNSKFSPNGRLFSLQD 63 (266)
T ss_pred cEEEEEECCCCChHHH-HHHHHH-----------HHHHhC---CCCCeeEEecCC---CCcCCcccccccCCCCccCHHH
Confidence 5799999999999888 776663 333332 566677777743 454433321 122348999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 167 TANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 167 ~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
+.+.-.+||+++....+ ..+.+++|.|||-|+..+-.+..++.+ ...+++++++.=|.+.-
T Consensus 64 QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGayi~levl~r~~~------~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 64 QIEHKIDFIKELIPQKN-KPNVKLILIGHSIGAYIALEVLKRLPD------LKFRVKKVILLFPTIED 124 (266)
T ss_pred HHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHHHHHHHHHHhccc------cCCceeEEEEeCCcccc
Confidence 99999999999887653 136789999999998766666665541 23557777776665544
No 92
>PRK11460 putative hydrolase; Provisional
Probab=94.83 E-value=0.12 Score=49.38 Aligned_cols=38 Identities=11% Similarity=0.001 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHH
Q 011738 170 DSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTEL 208 (478)
Q Consensus 170 ~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~ 208 (478)
.+.++++.+.+.. ....++++|+|+|.||..+-.++.+
T Consensus 86 ~l~~~i~~~~~~~-~~~~~~i~l~GfS~Gg~~al~~a~~ 123 (232)
T PRK11460 86 TFIETVRYWQQQS-GVGASATALIGFSQGAIMALEAVKA 123 (232)
T ss_pred HHHHHHHHHHHhc-CCChhhEEEEEECHHHHHHHHHHHh
Confidence 3444444433332 3345689999999999988776653
No 93
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=94.48 E-value=0.054 Score=60.60 Aligned_cols=146 Identities=19% Similarity=0.160 Sum_probs=78.2
Q ss_pred eEEeEEEeecCCCceEEEEEEEecC--CCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCccc-ccc
Q 011738 62 HYAGYVTVNEHNGRALFYWFYEAMT--RPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNK-EAN 138 (478)
Q Consensus 62 ~~sGy~~~~~~~~~~lfy~f~es~~--~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~-~~~ 138 (478)
...+-+.++ +-.+++++.-..+ +.+.-|++++..||||+-+. .+.+ .+..|.+.+.. -+=
T Consensus 498 ~~~~~i~~~---~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v-~~~~-------------~~~~~~~~~s~~g~~ 560 (755)
T KOG2100|consen 498 VEFGKIEID---GITANAILILPPNFDPSKKYPLLVVVYGGPGSQSV-TSKF-------------SVDWNEVVVSSRGFA 560 (755)
T ss_pred ceeEEEEec---cEEEEEEEecCCCCCCCCCCCEEEEecCCCCccee-eeeE-------------EecHHHHhhccCCeE
Confidence 345555552 3556677665432 33567999999999994333 1111 12223333332 255
Q ss_pred eeeeccCCCcccCCccCCCCC-cccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCC
Q 011738 139 MLFLESPIGVGFSYSNTTNDY-EMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPS 217 (478)
Q Consensus 139 ~l~iD~PvG~GfSy~~~~~~~-~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~ 217 (478)
++.|| +.|+|+.-..-.... ....+ ...+|...+.+.+.+.+ ..-..++.|+|-||||..... ++.+.+
T Consensus 561 v~~vd-~RGs~~~G~~~~~~~~~~lG~-~ev~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGGy~t~~----~l~~~~--- 630 (755)
T KOG2100|consen 561 VLQVD-GRGSGGYGWDFRSALPRNLGD-VEVKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGGYLTLK----LLESDP--- 630 (755)
T ss_pred EEEEc-CCCcCCcchhHHHHhhhhcCC-cchHHHHHHHHHHHhcc-cccHHHeEEeccChHHHHHHH----HhhhCc---
Confidence 78888 568887532110000 00111 12455556666555554 333457999999999964443 333321
Q ss_pred ceeeeeeeEecCCCCCch
Q 011738 218 LYIDLKGILLGNPETSTA 235 (478)
Q Consensus 218 ~~inLkGi~IGng~~dp~ 235 (478)
.--+|--+..+|++|..
T Consensus 631 -~~~fkcgvavaPVtd~~ 647 (755)
T KOG2100|consen 631 -GDVFKCGVAVAPVTDWL 647 (755)
T ss_pred -CceEEEEEEecceeeee
Confidence 12255546667777664
No 94
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=94.29 E-value=0.12 Score=48.88 Aligned_cols=40 Identities=15% Similarity=0.148 Sum_probs=31.9
Q ss_pred CCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCC
Q 011738 184 SYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (478)
Q Consensus 184 ~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 232 (478)
..-.+++|++|.|-||.....++....+. +.++++.+|..
T Consensus 93 ~iD~~RVyv~G~S~Gg~ma~~la~~~pd~---------faa~a~~sG~~ 132 (220)
T PF10503_consen 93 NIDPSRVYVTGLSNGGMMANVLACAYPDL---------FAAVAVVSGVP 132 (220)
T ss_pred ccCCCceeeEEECHHHHHHHHHHHhCCcc---------ceEEEeecccc
Confidence 44567899999999999888888766444 88888888863
No 95
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=94.16 E-value=0.12 Score=55.05 Aligned_cols=58 Identities=12% Similarity=0.008 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCC
Q 011738 168 ANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETS 233 (478)
Q Consensus 168 a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d 233 (478)
....++++++-...|. -..+++.|+|||.||+-+-.++..-.. +--++++++-+|...
T Consensus 157 ~~~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~~~~~~-------~~lf~~~i~~sg~~~ 214 (493)
T cd00312 157 QRLALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLLLSPDS-------KGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHhhCcch-------hHHHHHHhhhcCCcc
Confidence 4445667777776664 235689999999999866554432111 111556666666544
No 96
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=94.00 E-value=0.25 Score=50.47 Aligned_cols=132 Identities=18% Similarity=0.326 Sum_probs=76.8
Q ss_pred EeEEEeecCCCceEEEEEEEecC----CCCCCCceEEeCCCCChhhhh-----hhhhcccCCeEEcCCCCccccCCCCcc
Q 011738 64 AGYVTVNEHNGRALFYWFYEAMT----RPQEKPLVLWLNGGPGCSSVG-----YGATQEIGPFLVDTDGRGLQFNPYAWN 134 (478)
Q Consensus 64 sGy~~~~~~~~~~lfy~f~es~~----~~~~~P~~lwl~GGPG~ss~~-----~g~~~E~GP~~~~~~~~~~~~n~~sw~ 134 (478)
.-+|...+ .|.-..=|+..... +..++|++|.+.|=+|.|.-. ....++.| +
T Consensus 95 Reii~~~D-GG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~----------------- 155 (409)
T KOG1838|consen 95 REIIKTSD-GGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-Y----------------- 155 (409)
T ss_pred eEEEEeCC-CCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-c-----------------
Confidence 44455443 23334445543322 346789999999999987532 12233333 2
Q ss_pred cccceeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcC
Q 011738 135 KEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNK 214 (478)
Q Consensus 135 ~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~ 214 (478)
.++-+. +.|.|.|--++..-+.- .. .+|+-++++---++|| .++++.+|.|+||.. +..++-+..+
T Consensus 156 ---r~VVfN-~RG~~g~~LtTpr~f~a-g~---t~Dl~~~v~~i~~~~P---~a~l~avG~S~Gg~i---L~nYLGE~g~ 221 (409)
T KOG1838|consen 156 ---RVVVFN-HRGLGGSKLTTPRLFTA-GW---TEDLREVVNHIKKRYP---QAPLFAVGFSMGGNI---LTNYLGEEGD 221 (409)
T ss_pred ---EEEEEC-CCCCCCCccCCCceeec-CC---HHHHHHHHHHHHHhCC---CCceEEEEecchHHH---HHHHhhhccC
Confidence 333333 55988887665544322 22 2334444443336888 679999999999975 4445544432
Q ss_pred CCCceeeeeeeEecCCC
Q 011738 215 DPSLYIDLKGILLGNPE 231 (478)
Q Consensus 215 ~~~~~inLkGi~IGng~ 231 (478)
+ .++ ..|++|-|||
T Consensus 222 ~--~~l-~~a~~v~~Pw 235 (409)
T KOG1838|consen 222 N--TPL-IAAVAVCNPW 235 (409)
T ss_pred C--CCc-eeEEEEeccc
Confidence 2 223 7889999998
No 97
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=93.51 E-value=0.2 Score=49.92 Aligned_cols=45 Identities=20% Similarity=0.166 Sum_probs=37.9
Q ss_pred CCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCchh
Q 011738 187 RRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTAE 236 (478)
Q Consensus 187 ~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~~ 236 (478)
.+++.++|+|-||+.+..+|....++. ...+++.++..|++|...
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~~-----~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDRG-----LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhcC-----CCCceEEEEEecccCCcc
Confidence 568999999999999999999987752 234888999999999875
No 98
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=93.25 E-value=0.061 Score=50.55 Aligned_cols=59 Identities=27% Similarity=0.326 Sum_probs=39.0
Q ss_pred CCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCcccccCCChHHHHHHHHH
Q 011738 387 GLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHAVPVFKPSDSLALFSS 466 (478)
Q Consensus 387 ~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHmvP~dqP~~a~~mi~~ 466 (478)
+.+|++.+|+.|.++|....+...+.|+=.+ .+++|.++.|.||-++ ...+..+.+
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~--------------------~~v~~~~~~g~gH~i~----~~~~~~~~~ 210 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAG--------------------ANVEFHEYPGGGHEIS----PEELRDLRE 210 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT---------------------GEEEEEETT-SSS------HHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcC--------------------CCEEEEEcCCCCCCCC----HHHHHHHHH
Confidence 5788999999999999888877776664100 1578888888999885 455666677
Q ss_pred HHc
Q 011738 467 FLL 469 (478)
Q Consensus 467 fl~ 469 (478)
||.
T Consensus 211 ~l~ 213 (216)
T PF02230_consen 211 FLE 213 (216)
T ss_dssp HHH
T ss_pred HHh
Confidence 764
No 99
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=92.37 E-value=6.2 Score=38.65 Aligned_cols=94 Identities=14% Similarity=0.171 Sum_probs=62.3
Q ss_pred cccccceeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHh
Q 011738 133 WNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDR 212 (478)
Q Consensus 133 w~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~ 212 (478)
...++-+.=||+| |.-.--..-..++.--+.++.|+++...|+.| .-+-++=+|+--|......+|..-.++
T Consensus 75 i~~~fcv~HV~~P-Gqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f-------~lk~vIg~GvGAGAyIL~rFAl~hp~r 146 (326)
T KOG2931|consen 75 ILEHFCVYHVDAP-GQEDGAPSFPEGYPYPSMDDLADMLPEVLDHF-------GLKSVIGMGVGAGAYILARFALNHPER 146 (326)
T ss_pred HHhheEEEecCCC-ccccCCccCCCCCCCCCHHHHHHHHHHHHHhc-------CcceEEEecccccHHHHHHHHhcChhh
Confidence 4455788889998 76554222223322227889999999988732 244688889988877777777665444
Q ss_pred cCCCCceeeeeeeEecCCCCCchhhhhhhHHHhhh
Q 011738 213 NKDPSLYIDLKGILLGNPETSTAEDWQGLVDYAWS 247 (478)
Q Consensus 213 n~~~~~~inLkGi~IGng~~dp~~~~~~~~~~a~~ 247 (478)
+-|+++.|..-. ..++.++++.
T Consensus 147 ---------V~GLvLIn~~~~----a~gwiew~~~ 168 (326)
T KOG2931|consen 147 ---------VLGLVLINCDPC----AKGWIEWAYN 168 (326)
T ss_pred ---------eeEEEEEecCCC----CchHHHHHHH
Confidence 889999876432 3556666554
No 100
>COG4099 Predicted peptidase [General function prediction only]
Probab=92.36 E-value=0.96 Score=44.16 Aligned_cols=54 Identities=15% Similarity=0.069 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCC
Q 011738 171 SYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETS 233 (478)
Q Consensus 171 ~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d 233 (478)
..+.+.+=+...+..-.+++|+.|-|-||.-.-+++.+..+- +.+.+..+|-=|
T Consensus 252 ~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdf---------FAaa~~iaG~~d 305 (387)
T COG4099 252 KIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDF---------FAAAVPIAGGGD 305 (387)
T ss_pred HHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchh---------hheeeeecCCCc
Confidence 334444334455666678999999999999887777766554 677777666545
No 101
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=92.02 E-value=0.67 Score=55.41 Aligned_cols=103 Identities=12% Similarity=0.136 Sum_probs=71.0
Q ss_pred CCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccChHHHHHH
Q 011738 91 KPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTAND 170 (478)
Q Consensus 91 ~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~ 170 (478)
.|.++.++|+.|.+.. |..+.+ .......++-+|.| |.|-+. . .. .+.++.|++
T Consensus 1068 ~~~l~~lh~~~g~~~~-~~~l~~------------------~l~~~~~v~~~~~~-g~~~~~--~-~~---~~l~~la~~ 1121 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQ-FSVLSR------------------YLDPQWSIYGIQSP-RPDGPM--Q-TA---TSLDEVCEA 1121 (1296)
T ss_pred CCCeEEecCCCCchHH-HHHHHH------------------hcCCCCcEEEEECC-CCCCCC--C-CC---CCHHHHHHH
Confidence 4678899999887766 554442 11234678889998 877541 1 11 277888888
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCC
Q 011738 171 SYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (478)
Q Consensus 171 ~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 231 (478)
+.+.++. ..| ..+++++|+|+||..+-.+|.++.++. ..+..+++.+++
T Consensus 1122 ~~~~i~~---~~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~~------~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1122 HLATLLE---QQP---HGPYHLLGYSLGGTLAQGIAARLRARG------EEVAFLGLLDTW 1170 (1296)
T ss_pred HHHHHHh---hCC---CCCEEEEEechhhHHHHHHHHHHHHcC------CceeEEEEecCC
Confidence 8877764 223 358999999999999999998886652 236677766654
No 102
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=91.60 E-value=0.52 Score=52.60 Aligned_cols=100 Identities=14% Similarity=0.061 Sum_probs=62.3
Q ss_pred CCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCcc-C--------CCC--
Q 011738 90 EKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSN-T--------TND-- 158 (478)
Q Consensus 90 ~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~-~--------~~~-- 158 (478)
..|+||++||=.|.... +-.+.+ .+. .+-..++-+|.| |+|-|... . ...
T Consensus 448 g~P~VVllHG~~g~~~~-~~~lA~-----------~La------~~Gy~VIaiDlp-GHG~S~~~~~~~~~~a~~~~~~~ 508 (792)
T TIGR03502 448 GWPVVIYQHGITGAKEN-ALAFAG-----------TLA------AAGVATIAIDHP-LHGARSFDANASGVNATNANVLA 508 (792)
T ss_pred CCcEEEEeCCCCCCHHH-HHHHHH-----------HHH------hCCcEEEEeCCC-CCCccccccccccccccccCccc
Confidence 35899999997776655 433321 111 123578999999 99998322 1 010
Q ss_pred C--------cccChHHHHHHHHHHHHHHH------H---hCCCCCCCcEEEEeccCCccchHHHHHH
Q 011738 159 Y--------EMLGDDFTANDSYTFLHKWF------L---KFPSYRRRTFYIAGESYAGRYIPELTEL 208 (478)
Q Consensus 159 ~--------~~~~~~~~a~~~~~~l~~F~------~---~fp~~~~~~~~i~GeSYgG~yvp~la~~ 208 (478)
| .+.+..+...|++......- . .+..+...++++.|||.||.....++..
T Consensus 509 y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 509 YMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred eeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 1 01255777777776555432 1 1233556799999999999998888853
No 103
>PLN02454 triacylglycerol lipase
Probab=91.27 E-value=0.57 Score=48.19 Aligned_cols=70 Identities=10% Similarity=0.158 Sum_probs=53.3
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 163 GDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 163 ~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
+...+.+++...+++..+++|..+ ..++++|||.||-.+--.|..|.+.... ...+++..+..|.|-+..
T Consensus 204 ~~~S~r~qvl~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~-~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 204 TKLSARSQLLAKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVS-GADIPVTAIVFGSPQVGN 273 (414)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhccc-ccCCceEEEEeCCCcccC
Confidence 334677889999999999888653 3699999999999999888888765221 123557788898888765
No 104
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=91.21 E-value=0.46 Score=43.74 Aligned_cols=42 Identities=26% Similarity=0.316 Sum_probs=32.7
Q ss_pred CCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCchhhh
Q 011738 185 YRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTAEDW 238 (478)
Q Consensus 185 ~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~~~~ 238 (478)
.....+.|+|.|.||.|+-.+|.+. +++. ++.||.+.|....
T Consensus 56 ~~~~~~~liGSSlGG~~A~~La~~~-----------~~~a-vLiNPav~p~~~l 97 (187)
T PF05728_consen 56 LKPENVVLIGSSLGGFYATYLAERY-----------GLPA-VLINPAVRPYELL 97 (187)
T ss_pred CCCCCeEEEEEChHHHHHHHHHHHh-----------CCCE-EEEcCCCCHHHHH
Confidence 3355699999999999999998765 2555 6779999996543
No 105
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=90.89 E-value=0.52 Score=40.58 Aligned_cols=63 Identities=16% Similarity=0.215 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCC
Q 011738 166 FTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETS 233 (478)
Q Consensus 166 ~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d 233 (478)
...+.+.+.|++..+++| ..++.|+|||-||-.+..+|..+.++... ...+++-+.-|.|-+.
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~--~~~~~~~~~fg~P~~~ 107 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS--SSSNVKCYTFGAPRVG 107 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT--STTTEEEEEES-S--B
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc--cccceeeeecCCcccc
Confidence 445567777888777777 56899999999999999999999886432 2456777888877763
No 106
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=90.87 E-value=0.45 Score=44.02 Aligned_cols=64 Identities=20% Similarity=0.188 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHHh---CCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 165 DFTANDSYTFLHKWFLK---FPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 165 ~~~a~~~~~~l~~F~~~---fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
.+..+|+.++++-..+. + .+...+++|+|+|-||+.+..++..+.+... ..++++++..|++|.
T Consensus 46 p~~~~D~~~a~~~l~~~~~~~-~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~-----~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 46 PAALEDVKAAYRWLLKNADKL-GIDPERIVLIGDSAGGHLALSLALRARDRGL-----PKPKGIILISPWTDL 112 (211)
T ss_dssp THHHHHHHHHHHHHHHTHHHH-TEEEEEEEEEEETHHHHHHHHHHHHHHHTTT-----CHESEEEEESCHSST
T ss_pred cccccccccceeeeccccccc-cccccceEEeecccccchhhhhhhhhhhhcc-----cchhhhhcccccccc
Confidence 34455555555544442 1 2446689999999999999999988877632 239999999999877
No 107
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=90.84 E-value=0.76 Score=47.78 Aligned_cols=36 Identities=17% Similarity=0.112 Sum_probs=28.5
Q ss_pred CcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCC
Q 011738 188 RTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (478)
Q Consensus 188 ~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 232 (478)
.+..|+|.||||.-+-.+|.+-.+. +.+++..+|.+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd~---------Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPER---------FGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCccc---------ccEEEEeccce
Confidence 4689999999999888888765443 88888888865
No 108
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=90.65 E-value=0.63 Score=48.72 Aligned_cols=57 Identities=14% Similarity=0.141 Sum_probs=40.3
Q ss_pred eccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHH
Q 011738 142 LESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTEL 208 (478)
Q Consensus 142 iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~ 208 (478)
.|.+ |.||+.-.. . ..++..+++.+.++++++..+ .++++|+|||+||..+-.++..
T Consensus 126 ~dL~-g~gYDwR~~--~----~~~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 126 KTLF-GFGYDFRQS--N----RLPETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred CCcc-cCCCCcccc--c----cHHHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHHH
Confidence 3544 777765321 1 235567888888888887554 6799999999999887776654
No 109
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=90.43 E-value=0.41 Score=45.74 Aligned_cols=69 Identities=14% Similarity=0.227 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCchh
Q 011738 165 DFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTAE 236 (478)
Q Consensus 165 ~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~~ 236 (478)
...+..+.+||+...+.. ...+++|.+||+|+..+......+..........-.|..|++.+|-+|...
T Consensus 73 ~~s~~~l~~~L~~L~~~~---~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~ 141 (233)
T PF05990_consen 73 RFSGPALARFLRDLARAP---GIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDV 141 (233)
T ss_pred HHHHHHHHHHHHHHHhcc---CCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHH
Confidence 344555555555544432 267899999999999888887777766432112237899999999888743
No 110
>PRK11460 putative hydrolase; Provisional
Probab=90.43 E-value=0.41 Score=45.60 Aligned_cols=62 Identities=18% Similarity=0.091 Sum_probs=47.5
Q ss_pred CCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCcccccCCChHHHHHHHHH
Q 011738 387 GLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHAVPVFKPSDSLALFSS 466 (478)
Q Consensus 387 ~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHmvP~dqP~~a~~mi~~ 466 (478)
..+|++.+|..|.++|...++...+.|+=. -.+.++.++.++||.+..+.-+.+.+.+++
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~--------------------g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~ 207 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISL--------------------GGDVTLDIVEDLGHAIDPRLMQFALDRLRY 207 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHC--------------------CCCeEEEEECCCCCCCCHHHHHHHHHHHHH
Confidence 689999999999999999998888887510 025778888999999976555555555555
Q ss_pred HH
Q 011738 467 FL 468 (478)
Q Consensus 467 fl 468 (478)
++
T Consensus 208 ~l 209 (232)
T PRK11460 208 TV 209 (232)
T ss_pred Hc
Confidence 55
No 111
>COG0400 Predicted esterase [General function prediction only]
Probab=90.15 E-value=0.95 Score=42.35 Aligned_cols=62 Identities=13% Similarity=0.078 Sum_probs=44.0
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 163 GDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 163 ~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
+.+..++.+.+||....+.+. ...+++++.|.|=|+.++..+..+..+ .++|+++-.|..-+
T Consensus 75 dl~~~~~~~~~~l~~~~~~~g-i~~~~ii~~GfSqGA~ial~~~l~~~~---------~~~~ail~~g~~~~ 136 (207)
T COG0400 75 DLDLETEKLAEFLEELAEEYG-IDSSRIILIGFSQGANIALSLGLTLPG---------LFAGAILFSGMLPL 136 (207)
T ss_pred hHHHHHHHHHHHHHHHHHHhC-CChhheEEEecChHHHHHHHHHHhCch---------hhccchhcCCcCCC
Confidence 344456667788887777553 235689999999999887777655433 38888888777544
No 112
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=89.92 E-value=0.84 Score=43.69 Aligned_cols=107 Identities=21% Similarity=0.291 Sum_probs=69.5
Q ss_pred CCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccChHHHH
Q 011738 89 QEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTA 168 (478)
Q Consensus 89 ~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a 168 (478)
...+++|+.+|= +.- .|-..| ...+.|=.=+.|+.=.|-- |.|.|-+..... +.-+..
T Consensus 58 ~~~~~lly~hGN---a~D-lgq~~~-------------~~~~l~~~ln~nv~~~DYS-GyG~S~G~psE~----n~y~Di 115 (258)
T KOG1552|consen 58 AAHPTLLYSHGN---AAD-LGQMVE-------------LFKELSIFLNCNVVSYDYS-GYGRSSGKPSER----NLYADI 115 (258)
T ss_pred ccceEEEEcCCc---ccc-hHHHHH-------------HHHHHhhcccceEEEEecc-cccccCCCcccc----cchhhH
Confidence 345899999876 221 332221 1122233335688888977 999998775542 556667
Q ss_pred HHHHHHHHHHHHhCCCC-CCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 169 NDSYTFLHKWFLKFPSY-RRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 169 ~~~~~~l~~F~~~fp~~-~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
+..+++|++ ++ +..+++|+|.|.|..-.-.+|. +. + +.|+++-+|+++-
T Consensus 116 ~avye~Lr~------~~g~~~~Iil~G~SiGt~~tv~Las----r~-----~--~~alVL~SPf~S~ 165 (258)
T KOG1552|consen 116 KAVYEWLRN------RYGSPERIILYGQSIGTVPTVDLAS----RY-----P--LAAVVLHSPFTSG 165 (258)
T ss_pred HHHHHHHHh------hcCCCceEEEEEecCCchhhhhHhh----cC-----C--cceEEEeccchhh
Confidence 788888885 33 4678999999999754223333 21 2 9999999888654
No 113
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=89.55 E-value=0.4 Score=46.77 Aligned_cols=83 Identities=18% Similarity=0.155 Sum_probs=54.9
Q ss_pred cceeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCC
Q 011738 137 ANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDP 216 (478)
Q Consensus 137 ~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~ 216 (478)
+.+|.+|.. |+|-|.+.-... ..+.++|.++.+ +|+..-| +.+-++-++|.||+|......|..-
T Consensus 58 Y~vV~~D~R-G~g~S~G~~~~~-----~~~e~~D~~d~I-~W~~~Qp-ws~G~VGm~G~SY~G~~q~~~A~~~------- 122 (272)
T PF02129_consen 58 YAVVVQDVR-GTGGSEGEFDPM-----SPNEAQDGYDTI-EWIAAQP-WSNGKVGMYGISYGGFTQWAAAARR------- 122 (272)
T ss_dssp -EEEEEE-T-TSTTS-S-B-TT-----SHHHHHHHHHHH-HHHHHCT-TEEEEEEEEEETHHHHHHHHHHTTT-------
T ss_pred CEEEEECCc-ccccCCCccccC-----ChhHHHHHHHHH-HHHHhCC-CCCCeEEeeccCHHHHHHHHHHhcC-------
Confidence 588999966 999998764321 334455555544 3565554 4455799999999999888887632
Q ss_pred CceeeeeeeEecCCCCCchh
Q 011738 217 SLYIDLKGILLGNPETSTAE 236 (478)
Q Consensus 217 ~~~inLkGi~IGng~~dp~~ 236 (478)
+-.||.|+...+..|...
T Consensus 123 --~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 123 --PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp ---TTEEEEEEESE-SBTCC
T ss_pred --CCCceEEEecccCCcccc
Confidence 333999999988888754
No 114
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=89.52 E-value=2.7 Score=40.99 Aligned_cols=104 Identities=18% Similarity=0.298 Sum_probs=64.2
Q ss_pred CCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccChHHHH
Q 011738 89 QEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTA 168 (478)
Q Consensus 89 ~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a 168 (478)
+...+|+=++|-||+ --|+--+ .|.==...--+|=|.-| |.|++-......+ +.++
T Consensus 33 s~~gTVv~~hGsPGS-H~DFkYi-----------------~~~l~~~~iR~I~iN~P-Gf~~t~~~~~~~~---~n~e-- 88 (297)
T PF06342_consen 33 SPLGTVVAFHGSPGS-HNDFKYI-----------------RPPLDEAGIRFIGINYP-GFGFTPGYPDQQY---TNEE-- 88 (297)
T ss_pred CCceeEEEecCCCCC-ccchhhh-----------------hhHHHHcCeEEEEeCCC-CCCCCCCCccccc---ChHH--
Confidence 445589999999995 2221100 01000223356778889 9998865443322 3333
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCC
Q 011738 169 NDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (478)
Q Consensus 169 ~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 231 (478)
-..|.++|++.- +. +..+.+.|||-|+--+..+|... ++.|+++.||.
T Consensus 89 --r~~~~~~ll~~l-~i-~~~~i~~gHSrGcenal~la~~~-----------~~~g~~lin~~ 136 (297)
T PF06342_consen 89 --RQNFVNALLDEL-GI-KGKLIFLGHSRGCENALQLAVTH-----------PLHGLVLINPP 136 (297)
T ss_pred --HHHHHHHHHHHc-CC-CCceEEEEeccchHHHHHHHhcC-----------ccceEEEecCC
Confidence 334555555533 23 35788999999998888887654 27899998886
No 115
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=89.47 E-value=1.5 Score=39.86 Aligned_cols=77 Identities=17% Similarity=0.196 Sum_probs=51.1
Q ss_pred cccceeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcC
Q 011738 135 KEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNK 214 (478)
Q Consensus 135 ~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~ 214 (478)
....++.+|.| |.|.+-.. . . +.+..++.....+.. ..+ ..+++++|+|+||..+-.+|.++.++.
T Consensus 24 ~~~~v~~~~~~-g~~~~~~~--~---~-~~~~~~~~~~~~l~~---~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~~- 89 (212)
T smart00824 24 GRRDVSALPLP-GFGPGEPL--P---A-SADALVEAQAEAVLR---AAG---GRPFVLVGHSSGGLLAHAVAARLEARG- 89 (212)
T ss_pred CCccEEEecCC-CCCCCCCC--C---C-CHHHHHHHHHHHHHH---hcC---CCCeEEEEECHHHHHHHHHHHHHHhCC-
Confidence 34688999988 77754221 1 1 455556555555542 333 568999999999999999999887652
Q ss_pred CCCceeeeeeeEecCC
Q 011738 215 DPSLYIDLKGILLGNP 230 (478)
Q Consensus 215 ~~~~~inLkGi~IGng 230 (478)
..++++++.++
T Consensus 90 -----~~~~~l~~~~~ 100 (212)
T smart00824 90 -----IPPAAVVLLDT 100 (212)
T ss_pred -----CCCcEEEEEcc
Confidence 23667766554
No 116
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=88.84 E-value=1.2 Score=39.08 Aligned_cols=61 Identities=16% Similarity=0.154 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCC
Q 011738 165 DFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (478)
Q Consensus 165 ~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 232 (478)
..+++.+...+++....+| ..+++|+|||.||..+-.+|.++.++.. .-.++-+..|.|-+
T Consensus 8 ~~~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~~~----~~~~~~~~fg~p~~ 68 (153)
T cd00741 8 RSLANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGRGL----GRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhccC----CCceEEEEeCCCcc
Confidence 3455556666666666667 5589999999999999999988876521 12245555555543
No 117
>COG1647 Esterase/lipase [General function prediction only]
Probab=88.48 E-value=11 Score=35.56 Aligned_cols=61 Identities=16% Similarity=0.193 Sum_probs=47.4
Q ss_pred CCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCcccccCC-ChHHHHHHHH
Q 011738 387 GLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHAVPVF-KPSDSLALFS 465 (478)
Q Consensus 387 ~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHmvP~d-qP~~a~~mi~ 465 (478)
..+++|..|..|-++|..+++...+.+.=.. =.+.+..++||-+-.| +.+...+-+-
T Consensus 181 ~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~----------------------KeL~~~e~SgHVIt~D~Erd~v~e~V~ 238 (243)
T COG1647 181 YSPTLVVQGRQDEMVPAESANFIYDHVESDD----------------------KELKWLEGSGHVITLDKERDQVEEDVI 238 (243)
T ss_pred ccchhheecccCCCCCHHHHHHHHHhccCCc----------------------ceeEEEccCCceeecchhHHHHHHHHH
Confidence 5789999999999999999999988875111 1235567999999998 4566667777
Q ss_pred HHHc
Q 011738 466 SFLL 469 (478)
Q Consensus 466 ~fl~ 469 (478)
+||.
T Consensus 239 ~FL~ 242 (243)
T COG1647 239 TFLE 242 (243)
T ss_pred HHhh
Confidence 7775
No 118
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=88.46 E-value=1.1 Score=42.48 Aligned_cols=62 Identities=18% Similarity=0.201 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 166 FTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 166 ~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
.+.+++...+++..+++| +.+++++|||.||-.+-.+|..+.++. ...+++.+..|.|-+-.
T Consensus 109 ~~~~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~----~~~~i~~~tFg~P~vg~ 170 (229)
T cd00519 109 SLYNQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRG----PGSDVTVYTFGQPRVGN 170 (229)
T ss_pred HHHHHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhC----CCCceEEEEeCCCCCCC
Confidence 344455566666666666 568999999999999998888887653 23458888888887643
No 119
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=88.33 E-value=1 Score=38.57 Aligned_cols=47 Identities=23% Similarity=0.350 Sum_probs=36.7
Q ss_pred HHHHcCCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCccc
Q 011738 382 KLIEAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHA 451 (478)
Q Consensus 382 ~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHm 451 (478)
.+-...++|++.+|..|.+++....+.+.++++ ..-.++.|.|+||+
T Consensus 99 ~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 99 DLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP-----------------------GPKELYIIPGAGHF 145 (145)
T ss_dssp HHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC-----------------------SSEEEEEETTS-TT
T ss_pred hhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC-----------------------CCcEEEEeCCCcCc
Confidence 333456899999999999999999999888876 24567899999996
No 120
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=88.02 E-value=0.68 Score=49.57 Aligned_cols=115 Identities=19% Similarity=0.186 Sum_probs=66.2
Q ss_pred CCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCccccc----------ceeeeccCCCcccCCccCC-C
Q 011738 89 QEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEA----------NMLFLESPIGVGFSYSNTT-N 157 (478)
Q Consensus 89 ~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~----------~~l~iD~PvG~GfSy~~~~-~ 157 (478)
+.-|++|.+-||||. .++.|.+.|.+.. -|++||.- |+--- +-.- +
T Consensus 640 kkYptvl~VYGGP~V---------------------QlVnnsfkgi~ylR~~~LaslGy~Vv~IDnR-GS~hR-GlkFE~ 696 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGV---------------------QLVNNSFKGIQYLRFCRLASLGYVVVFIDNR-GSAHR-GLKFES 696 (867)
T ss_pred CCCceEEEEcCCCce---------------------EEeeccccceehhhhhhhhhcceEEEEEcCC-Ccccc-chhhHH
Confidence 358999999999996 4666888887752 35899965 54211 1000 0
Q ss_pred CCcc-cChHHHHHHHHHHHHHHHHhCCCCC-CCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCch
Q 011738 158 DYEM-LGDDFTANDSYTFLHKWFLKFPSYR-RRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (478)
Q Consensus 158 ~~~~-~~~~~~a~~~~~~l~~F~~~fp~~~-~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~ 235 (478)
-+.. -... .++|-.+.||-..++.- |. -..+-|-|-||||........+ . +.| ++-.+-|.|++++.
T Consensus 697 ~ik~kmGqV-E~eDQVeglq~Laeq~g-fidmdrV~vhGWSYGGYLSlm~L~~---~-----P~I-frvAIAGapVT~W~ 765 (867)
T KOG2281|consen 697 HIKKKMGQV-EVEDQVEGLQMLAEQTG-FIDMDRVGVHGWSYGGYLSLMGLAQ---Y-----PNI-FRVAIAGAPVTDWR 765 (867)
T ss_pred HHhhccCee-eehhhHHHHHHHHHhcC-cccchheeEeccccccHHHHHHhhc---C-----cce-eeEEeccCcceeee
Confidence 0000 0111 13333444554444332 22 2369999999999765543322 1 233 77778899998886
Q ss_pred hh
Q 011738 236 ED 237 (478)
Q Consensus 236 ~~ 237 (478)
.-
T Consensus 766 ~Y 767 (867)
T KOG2281|consen 766 LY 767 (867)
T ss_pred ee
Confidence 43
No 121
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=87.84 E-value=1.1 Score=45.89 Aligned_cols=61 Identities=20% Similarity=0.163 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCC-CcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCch
Q 011738 166 FTANDSYTFLHKWFLKFPSYRR-RTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (478)
Q Consensus 166 ~~a~~~~~~l~~F~~~fp~~~~-~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~ 235 (478)
-+|-|+..+|..-.+.||.... .|+++.|.|||| |...|+.+|. |=.+.||+=-++++-|.
T Consensus 161 MqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~a--------P~~~~~~iDns~~~~p~ 222 (403)
T PF11144_consen 161 MQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIA--------PWLFDGVIDNSSYALPP 222 (403)
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhC--------ccceeEEEecCccccch
Confidence 4688999999998889999975 799999999998 5566666662 33377777767776664
No 122
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.70 E-value=1.4 Score=41.94 Aligned_cols=99 Identities=23% Similarity=0.486 Sum_probs=54.4
Q ss_pred CCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCC----CcccccceeeeccCCCcccCCccCCCCCcccC
Q 011738 88 PQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPY----AWNKEANMLFLESPIGVGFSYSNTTNDYEMLG 163 (478)
Q Consensus 88 ~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~----sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~ 163 (478)
..++|+++|+-|-||-++. +- |.|= .+..|-- -|+ ..++==.+.|+-.=-+.... .....+
T Consensus 26 ~~~~~li~~IpGNPG~~gF-Y~---~F~~--------~L~~~l~~r~~~wt-Ish~~H~~~P~sl~~~~s~~--~~eifs 90 (301)
T KOG3975|consen 26 GEDKPLIVWIPGNPGLLGF-YT---EFAR--------HLHLNLIDRLPVWT-ISHAGHALMPASLREDHSHT--NEEIFS 90 (301)
T ss_pred CCCceEEEEecCCCCchhH-HH---HHHH--------HHHHhcccccceeE-EeccccccCCcccccccccc--cccccc
Confidence 3788999999999998665 43 3331 1111111 121 11111123342111111111 112247
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHH
Q 011738 164 DDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELT 206 (478)
Q Consensus 164 ~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la 206 (478)
.+++.+.=.+|++++. | +++++||.|||-|...+-.+-
T Consensus 91 L~~QV~HKlaFik~~~---P--k~~ki~iiGHSiGaYm~Lqil 128 (301)
T KOG3975|consen 91 LQDQVDHKLAFIKEYV---P--KDRKIYIIGHSIGAYMVLQIL 128 (301)
T ss_pred hhhHHHHHHHHHHHhC---C--CCCEEEEEecchhHHHHHHHh
Confidence 7778888888888654 3 378999999999865544433
No 123
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=86.97 E-value=1 Score=41.28 Aligned_cols=64 Identities=16% Similarity=0.256 Sum_probs=52.6
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 163 GDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 163 ~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
+.+++|.|+-..++.+.+ ++..+++.|+|-|+|.=.+|.+..++...- +-.++++++..+-...
T Consensus 46 tP~~~a~Dl~~~i~~y~~---~w~~~~vvLiGYSFGADvlP~~~nrLp~~~-----r~~v~~v~Ll~p~~~~ 109 (192)
T PF06057_consen 46 TPEQTAADLARIIRHYRA---RWGRKRVVLIGYSFGADVLPFIYNRLPAAL-----RARVAQVVLLSPSTTA 109 (192)
T ss_pred CHHHHHHHHHHHHHHHHH---HhCCceEEEEeecCCchhHHHHHhhCCHHH-----HhheeEEEEeccCCcc
Confidence 789999999999998888 555889999999999999999999887653 3348888887665443
No 124
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=86.54 E-value=1.7 Score=45.52 Aligned_cols=98 Identities=15% Similarity=0.117 Sum_probs=61.2
Q ss_pred cccceeeeccCCCcccCCccCC---CCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHH
Q 011738 135 KEANMLFLESPIGVGFSYSNTT---NDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHD 211 (478)
Q Consensus 135 ~~~~~l~iD~PvG~GfSy~~~~---~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~ 211 (478)
-.|-+|+++.. =.|-|..... .+..-.+.+|+..|+..|++.+-.++....+.|++++|-||||..+.-+-.+..+
T Consensus 58 ~~a~~v~lEHR-yYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~ 136 (434)
T PF05577_consen 58 FGALVVALEHR-YYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPH 136 (434)
T ss_dssp HTEEEEEE--T-TSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TT
T ss_pred cCCcEEEeehh-hhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCC
Confidence 34778899977 7888864221 1222248899999999999998877766667899999999999766555544433
Q ss_pred hcCCCCceeeeeeeEecCCCCCchhhhhhhH
Q 011738 212 RNKDPSLYIDLKGILLGNPETSTAEDWQGLV 242 (478)
Q Consensus 212 ~n~~~~~~inLkGi~IGng~~dp~~~~~~~~ 242 (478)
- +.|.+--++.+....+...|.
T Consensus 137 ~---------~~ga~ASSapv~a~~df~~y~ 158 (434)
T PF05577_consen 137 L---------FDGAWASSAPVQAKVDFWEYF 158 (434)
T ss_dssp T----------SEEEEET--CCHCCTTTHHH
T ss_pred e---------eEEEEeccceeeeecccHHHH
Confidence 2 667777777777665544443
No 125
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=86.42 E-value=1.8 Score=43.22 Aligned_cols=61 Identities=20% Similarity=0.203 Sum_probs=39.1
Q ss_pred cccceeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchH
Q 011738 135 KEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIP 203 (478)
Q Consensus 135 ~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp 203 (478)
..+|++...-| |||+|.+..+. .+...+++...++|+ +....-+.+++.+.|+|-||-...
T Consensus 170 ~~aNvl~fNYp-GVg~S~G~~s~----~dLv~~~~a~v~yL~---d~~~G~ka~~Ii~yG~SLGG~Vqa 230 (365)
T PF05677_consen 170 LGANVLVFNYP-GVGSSTGPPSR----KDLVKDYQACVRYLR---DEEQGPKAKNIILYGHSLGGGVQA 230 (365)
T ss_pred cCCcEEEECCC-ccccCCCCCCH----HHHHHHHHHHHHHHH---hcccCCChheEEEeeccccHHHHH
Confidence 45899999999 99999665421 133334444444443 222223457899999999996544
No 126
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=85.90 E-value=3 Score=32.49 Aligned_cols=78 Identities=21% Similarity=0.189 Sum_probs=49.4
Q ss_pred ceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCcc
Q 011738 75 RALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSN 154 (478)
Q Consensus 75 ~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~ 154 (478)
.+||+..+...+. .+.+|+.++|--..|.- +..|.+ .|. .+-.+++-+|+. |.|.|-+.
T Consensus 2 ~~L~~~~w~p~~~--~k~~v~i~HG~~eh~~r-y~~~a~-----------~L~------~~G~~V~~~D~r-GhG~S~g~ 60 (79)
T PF12146_consen 2 TKLFYRRWKPENP--PKAVVVIVHGFGEHSGR-YAHLAE-----------FLA------EQGYAVFAYDHR-GHGRSEGK 60 (79)
T ss_pred cEEEEEEecCCCC--CCEEEEEeCCcHHHHHH-HHHHHH-----------HHH------hCCCEEEEECCC-cCCCCCCc
Confidence 4577776654322 57888888887444544 555442 222 123488999999 99999753
Q ss_pred CCCCCcccChHHHHHHHHHHHH
Q 011738 155 TTNDYEMLGDDFTANDSYTFLH 176 (478)
Q Consensus 155 ~~~~~~~~~~~~~a~~~~~~l~ 176 (478)
.. ... +.++..+|+..|+|
T Consensus 61 rg--~~~-~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 61 RG--HID-SFDDYVDDLHQFIQ 79 (79)
T ss_pred cc--ccC-CHHHHHHHHHHHhC
Confidence 32 222 67778888777764
No 127
>PLN02571 triacylglycerol lipase
Probab=85.76 E-value=2.5 Score=43.68 Aligned_cols=69 Identities=10% Similarity=0.113 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCC-----CCceeeeeeeEecCCCCCc
Q 011738 165 DFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKD-----PSLYIDLKGILLGNPETST 234 (478)
Q Consensus 165 ~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~-----~~~~inLkGi~IGng~~dp 234 (478)
..+.++++..|+.+.+++|.. ..+++++|||.||-.+--.|..|....-. ....+++..+..|.|-+..
T Consensus 204 ~Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN 277 (413)
T PLN02571 204 TSARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGD 277 (413)
T ss_pred hhHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccC
Confidence 355678888888888888764 34799999999999998888888753211 1224567778888887764
No 128
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=85.70 E-value=1.4 Score=43.64 Aligned_cols=67 Identities=25% Similarity=0.340 Sum_probs=50.7
Q ss_pred CCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEe-CCeEEEEEcCCccccc--CCChHHHHHH
Q 011738 387 GLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEY-AGLTFVTVRGAGHAVP--VFKPSDSLAL 463 (478)
Q Consensus 387 ~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~-~~ltf~~V~~AGHmvP--~dqP~~a~~m 463 (478)
..+|+||+|..|-++|+..++..++++- +.. .+++|.++.+++|+.. ...|...-.|
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c--------------------~~G~a~V~~~~~~~~~H~~~~~~~~~~a~~Wl 278 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWC--------------------AAGGADVEYVRYPGGGHLGAAFASAPDALAWL 278 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHH--------------------HcCCCCEEEEecCCCChhhhhhcCcHHHHHHH
Confidence 5899999999999999999999988864 112 2688999999999965 4677555555
Q ss_pred HHHHHcCCCCC
Q 011738 464 FSSFLLGDPLP 474 (478)
Q Consensus 464 i~~fl~~~~~~ 474 (478)
-+|| .|++.+
T Consensus 279 ~~rf-~G~~~~ 288 (290)
T PF03583_consen 279 DDRF-AGKPAT 288 (290)
T ss_pred HHHH-CCCCCC
Confidence 4444 566554
No 129
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=85.56 E-value=1.1 Score=41.75 Aligned_cols=44 Identities=16% Similarity=0.223 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHH
Q 011738 166 FTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHD 211 (478)
Q Consensus 166 ~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~ 211 (478)
-+-.|+.++++.|++.+++ +|||+|+|||=|+..+-.|.++..+
T Consensus 75 ~ay~DV~~AF~~yL~~~n~--GRPfILaGHSQGs~~l~~LL~e~~~ 118 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYNN--GRPFILAGHSQGSMHLLRLLKEEIA 118 (207)
T ss_pred hhHHHHHHHHHHHHHhcCC--CCCEEEEEeChHHHHHHHHHHHHhc
Confidence 3456788899999988875 8999999999999877766655443
No 130
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=85.21 E-value=6.2 Score=38.20 Aligned_cols=77 Identities=16% Similarity=0.180 Sum_probs=54.9
Q ss_pred ceeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCC
Q 011738 138 NMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPS 217 (478)
Q Consensus 138 ~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~ 217 (478)
-++-++.| |.|.- ... . .+.++.++...+.|. +.-|+ -|++|.|.|+||..+-.+|.++..+-..
T Consensus 28 ~v~~l~a~-g~~~~--~~~--~--~~l~~~a~~yv~~Ir---~~QP~---GPy~L~G~S~GG~vA~evA~qL~~~G~~-- 92 (257)
T COG3319 28 PVYGLQAP-GYGAG--EQP--F--ASLDDMAAAYVAAIR---RVQPE---GPYVLLGWSLGGAVAFEVAAQLEAQGEE-- 92 (257)
T ss_pred eeeccccC-ccccc--ccc--c--CCHHHHHHHHHHHHH---HhCCC---CCEEEEeeccccHHHHHHHHHHHhCCCe--
Confidence 46777877 66531 111 1 167888888777776 46774 3999999999999999999999887433
Q ss_pred ceeeeeeeEecCCCCC
Q 011738 218 LYIDLKGILLGNPETS 233 (478)
Q Consensus 218 ~~inLkGi~IGng~~d 233 (478)
+.-++|.+....
T Consensus 93 ----Va~L~llD~~~~ 104 (257)
T COG3319 93 ----VAFLGLLDAVPP 104 (257)
T ss_pred ----EEEEEEeccCCC
Confidence 666777666554
No 131
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=85.15 E-value=4.4 Score=38.44 Aligned_cols=122 Identities=12% Similarity=0.064 Sum_probs=62.0
Q ss_pred CCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccChHHHHH
Q 011738 90 EKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTAN 169 (478)
Q Consensus 90 ~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~ 169 (478)
+...||+++|--|+... +..+...- ..+ . ....+....++.-+|-.- -+|.-.. . ...+.++
T Consensus 3 ~g~pVlFIhG~~Gs~~q-~rsl~~~~----~~~---~--~~~~~~~~~d~ft~df~~--~~s~~~g--~----~l~~q~~ 64 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQ-VRSLASEL----QRK---A--LLNDNSSHFDFFTVDFNE--ELSAFHG--R----TLQRQAE 64 (225)
T ss_pred CCCEEEEECcCCCCHhH-HHHHHHHH----hhh---h--hhccCccceeEEEeccCc--ccccccc--c----cHHHHHH
Confidence 45779999998887664 33332110 000 0 011222335666666431 1121111 1 3345566
Q ss_pred HHHHHHHHHHHhC--CCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeee-eEecCCCCCch
Q 011738 170 DSYTFLHKWFLKF--PSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKG-ILLGNPETSTA 235 (478)
Q Consensus 170 ~~~~~l~~F~~~f--p~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkG-i~IGng~~dp~ 235 (478)
.+.+.++...+.+ ..-..+++.|+|||+||.-+-.+.. ..... .-++++ |.+|.|...+.
T Consensus 65 ~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~-~~~~~-----~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 65 FLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALS-LPNYD-----PDSVKTIITLGTPHRGSP 127 (225)
T ss_pred HHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHh-ccccc-----cccEEEEEEEcCCCCCcc
Confidence 6666666666544 1223678999999999964333332 22211 122444 45777776664
No 132
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=84.42 E-value=0.89 Score=42.60 Aligned_cols=57 Identities=11% Similarity=-0.011 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 167 TANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 167 ~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
.++.+.+++....+.. ...++++|.|-|-||..+-.++.+.. -.+.|++..+|++-+
T Consensus 86 s~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l~~p---------~~~~gvv~lsG~~~~ 142 (216)
T PF02230_consen 86 SAERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLALRYP---------EPLAGVVALSGYLPP 142 (216)
T ss_dssp HHHHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHHCTS---------STSSEEEEES---TT
T ss_pred HHHHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHHHcC---------cCcCEEEEeeccccc
Confidence 3444445555444322 44678999999999988877775432 249999999998754
No 133
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=84.29 E-value=0.67 Score=42.84 Aligned_cols=73 Identities=10% Similarity=0.033 Sum_probs=52.5
Q ss_pred CcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeE
Q 011738 147 GVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGIL 226 (478)
Q Consensus 147 G~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~ 226 (478)
-+||-+++..- +.++...++..+++--++.+|. .+.+.+.|||-|.|.+.....++.. ..+.|++
T Consensus 102 svgY~l~~q~h-----tL~qt~~~~~~gv~filk~~~n--~k~l~~gGHSaGAHLa~qav~R~r~--------prI~gl~ 166 (270)
T KOG4627|consen 102 SVGYNLCPQVH-----TLEQTMTQFTHGVNFILKYTEN--TKVLTFGGHSAGAHLAAQAVMRQRS--------PRIWGLI 166 (270)
T ss_pred EeccCcCcccc-----cHHHHHHHHHHHHHHHHHhccc--ceeEEEcccchHHHHHHHHHHHhcC--------chHHHHH
Confidence 45665554321 6778888888888877788875 3459999999999988777777422 2378888
Q ss_pred ecCCCCCc
Q 011738 227 LGNPETST 234 (478)
Q Consensus 227 IGng~~dp 234 (478)
+-+|+-+-
T Consensus 167 l~~GvY~l 174 (270)
T KOG4627|consen 167 LLCGVYDL 174 (270)
T ss_pred HHhhHhhH
Confidence 88887554
No 134
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=83.00 E-value=0.32 Score=49.03 Aligned_cols=105 Identities=14% Similarity=0.188 Sum_probs=60.6
Q ss_pred CCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcc-cccceeeeccCCCcccCCccCCCCCcccChHH
Q 011738 88 PQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWN-KEANMLFLESPIGVGFSYSNTTNDYEMLGDDF 166 (478)
Q Consensus 88 ~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~-~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~ 166 (478)
..++|++|.+||=-+..+.. .-+. .+..+-.... ...|||.||--.+..-.|... ..+...
T Consensus 68 n~~~pt~iiiHGw~~~~~~~-~~~~------------~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a-----~~n~~~ 129 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSE-SWIQ------------DMIKALLQKDTGDYNVIVVDWSRGASNNYPQA-----VANTRL 129 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TT-THHH------------HHHHHHHCC--S-EEEEEEE-HHHHSS-HHHH-----HHHHHH
T ss_pred CCCCCeEEEEcCcCCcccch-hHHH------------HHHHHHHhhccCCceEEEEcchhhccccccch-----hhhHHH
Confidence 45789999999855444110 1111 1121112221 467999999876665444321 125667
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHH
Q 011738 167 TANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHD 211 (478)
Q Consensus 167 ~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~ 211 (478)
+++.+-.||+.....+ .+...+++|+|+|.|+|.+-..++++..
T Consensus 130 vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 130 VGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp HHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 8888888888777432 2235689999999999988888887755
No 135
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=82.30 E-value=26 Score=33.03 Aligned_cols=82 Identities=18% Similarity=0.107 Sum_probs=50.6
Q ss_pred eeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCc
Q 011738 139 MLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSL 218 (478)
Q Consensus 139 ~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~ 218 (478)
.+-+|=. |-|-|-++- ++. +-...|+|+...+|-|-. ....=-.|.|||=||--+--.|.++.+- ..
T Consensus 65 ~fRfDF~-GnGeS~gsf--~~G--n~~~eadDL~sV~q~~s~----~nr~v~vi~gHSkGg~Vvl~ya~K~~d~----~~ 131 (269)
T KOG4667|consen 65 AFRFDFS-GNGESEGSF--YYG--NYNTEADDLHSVIQYFSN----SNRVVPVILGHSKGGDVVLLYASKYHDI----RN 131 (269)
T ss_pred EEEEEec-CCCCcCCcc--ccC--cccchHHHHHHHHHHhcc----CceEEEEEEeecCccHHHHHHHHhhcCc----hh
Confidence 4556633 888775432 222 233346999988886543 2122246789999999999999888661 23
Q ss_pred eeeeeeeEecCCCCC
Q 011738 219 YIDLKGILLGNPETS 233 (478)
Q Consensus 219 ~inLkGi~IGng~~d 233 (478)
-||+.|=..+-+.+.
T Consensus 132 viNcsGRydl~~~I~ 146 (269)
T KOG4667|consen 132 VINCSGRYDLKNGIN 146 (269)
T ss_pred eEEcccccchhcchh
Confidence 566666555544443
No 136
>COG0400 Predicted esterase [General function prediction only]
Probab=81.63 E-value=2 Score=40.23 Aligned_cols=60 Identities=27% Similarity=0.264 Sum_probs=43.7
Q ss_pred cCCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCcccccCCChHHHHHHHH
Q 011738 386 AGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHAVPVFKPSDSLALFS 465 (478)
Q Consensus 386 ~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHmvP~dqP~~a~~mi~ 465 (478)
.+.+|++.+|..|-+||..-+++..+.|.=.| .+..+.++. .||.++.+ .++.++
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g--------------------~~v~~~~~~-~GH~i~~e----~~~~~~ 199 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTASG--------------------ADVEVRWHE-GGHEIPPE----ELEAAR 199 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHHcC--------------------CCEEEEEec-CCCcCCHH----HHHHHH
Confidence 47999999999999999999988887775222 145555555 99999754 445555
Q ss_pred HHHcC
Q 011738 466 SFLLG 470 (478)
Q Consensus 466 ~fl~~ 470 (478)
+|+.+
T Consensus 200 ~wl~~ 204 (207)
T COG0400 200 SWLAN 204 (207)
T ss_pred HHHHh
Confidence 56644
No 137
>PRK04940 hypothetical protein; Provisional
Probab=81.50 E-value=3.1 Score=37.96 Aligned_cols=60 Identities=15% Similarity=0.164 Sum_probs=39.5
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCchhh
Q 011738 163 GDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTAED 237 (478)
Q Consensus 163 ~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~~~ 237 (478)
...++...+.+.+.++... .. ..++.|+|.|.||.|+-.+|.+. .++.| |.||.+.|...
T Consensus 38 ~P~~a~~~l~~~i~~~~~~--~~-~~~~~liGSSLGGyyA~~La~~~-----------g~~aV-LiNPAv~P~~~ 97 (180)
T PRK04940 38 HPKHDMQHLLKEVDKMLQL--SD-DERPLICGVGLGGYWAERIGFLC-----------GIRQV-IFNPNLFPEEN 97 (180)
T ss_pred CHHHHHHHHHHHHHHhhhc--cC-CCCcEEEEeChHHHHHHHHHHHH-----------CCCEE-EECCCCChHHH
Confidence 4555555555555433221 11 24799999999999999999874 25554 55999999653
No 138
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=80.95 E-value=7.9 Score=40.64 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=24.9
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHH
Q 011738 171 SYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELT 206 (478)
Q Consensus 171 ~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la 206 (478)
-++.+++.++.|-.= ..++-|+|||-|+.-|..+.
T Consensus 164 ALkWV~~NIe~FGGD-p~NVTl~GeSAGa~si~~Ll 198 (491)
T COG2272 164 ALKWVRDNIEAFGGD-PQNVTLFGESAGAASILTLL 198 (491)
T ss_pred HHHHHHHHHHHhCCC-ccceEEeeccchHHHHHHhh
Confidence 346677777777432 34799999999987665543
No 139
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=79.14 E-value=2.3 Score=39.29 Aligned_cols=106 Identities=21% Similarity=0.258 Sum_probs=65.3
Q ss_pred CceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCc
Q 011738 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYS 153 (478)
Q Consensus 74 ~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~ 153 (478)
+.+|.|.-+.+ -.--||.+-|--||+-.+++ |-..+ .++ -. ...++-+|+| |.|-|..
T Consensus 30 g~ql~y~~~G~-----G~~~iLlipGalGs~~tDf~------pql~~-------l~k--~l-~~TivawDPp-GYG~SrP 87 (277)
T KOG2984|consen 30 GTQLGYCKYGH-----GPNYILLIPGALGSYKTDFP------PQLLS-------LFK--PL-QVTIVAWDPP-GYGTSRP 87 (277)
T ss_pred CceeeeeecCC-----CCceeEecccccccccccCC------HHHHh-------cCC--CC-ceEEEEECCC-CCCCCCC
Confidence 46677763322 22457888888898887632 21111 011 11 1689999987 9999986
Q ss_pred cCCCCCcc---cChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHh
Q 011738 154 NTTNDYEM---LGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDR 212 (478)
Q Consensus 154 ~~~~~~~~---~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~ 212 (478)
.... +.. -.+.+.|-|+.++|+ -.+|-|.|-|=||.-+-..|.+-.+.
T Consensus 88 P~Rk-f~~~ff~~Da~~avdLM~aLk----------~~~fsvlGWSdGgiTalivAak~~e~ 138 (277)
T KOG2984|consen 88 PERK-FEVQFFMKDAEYAVDLMEALK----------LEPFSVLGWSDGGITALIVAAKGKEK 138 (277)
T ss_pred Cccc-chHHHHHHhHHHHHHHHHHhC----------CCCeeEeeecCCCeEEEEeeccChhh
Confidence 5432 211 024455556666653 45899999999998877776655443
No 140
>PLN02753 triacylglycerol lipase
Probab=78.02 E-value=6.7 Score=41.62 Aligned_cols=72 Identities=11% Similarity=0.070 Sum_probs=51.9
Q ss_pred ChHHHHHHHHHHHHHHHHhCCC--CCCCcEEEEeccCCccchHHHHHHHHHhcCC---CCceeeeeeeEecCCCCCc
Q 011738 163 GDDFTANDSYTFLHKWFLKFPS--YRRRTFYIAGESYAGRYIPELTELIHDRNKD---PSLYIDLKGILLGNPETST 234 (478)
Q Consensus 163 ~~~~~a~~~~~~l~~F~~~fp~--~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~---~~~~inLkGi~IGng~~dp 234 (478)
+...+.++++..++...+++|. .....++|+|||.||-.+--.|..|.+..-. ....+++.-+..|.|-+..
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN 361 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGN 361 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccC
Confidence 3456778899999998887763 2245799999999999999999888764211 1224556777778777655
No 141
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=76.39 E-value=4.9 Score=38.17 Aligned_cols=56 Identities=14% Similarity=0.122 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCch
Q 011738 167 TANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (478)
Q Consensus 167 ~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~ 235 (478)
..+++..++++ .|+-...+ ..|+|.|+||.-+-.+|.+-.+. +.+++..+|.+++.
T Consensus 98 l~~el~p~i~~---~~~~~~~~-~~i~G~S~GG~~Al~~~l~~Pd~---------F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 98 LTEELIPYIEA---NYRTDPDR-RAIAGHSMGGYGALYLALRHPDL---------FGAVIAFSGALDPS 153 (251)
T ss_dssp HHTHHHHHHHH---HSSEEECC-EEEEEETHHHHHHHHHHHHSTTT---------ESEEEEESEESETT
T ss_pred hhccchhHHHH---hcccccce-eEEeccCCCcHHHHHHHHhCccc---------cccccccCcccccc
Confidence 44455555554 34333233 89999999999888888765444 99999999998876
No 142
>PLN02719 triacylglycerol lipase
Probab=76.30 E-value=7.6 Score=41.11 Aligned_cols=70 Identities=10% Similarity=0.119 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCCC--CCcEEEEeccCCccchHHHHHHHHHhcCC---CCceeeeeeeEecCCCCCc
Q 011738 165 DFTANDSYTFLHKWFLKFPSYR--RRTFYIAGESYAGRYIPELTELIHDRNKD---PSLYIDLKGILLGNPETST 234 (478)
Q Consensus 165 ~~~a~~~~~~l~~F~~~fp~~~--~~~~~i~GeSYgG~yvp~la~~i~~~n~~---~~~~inLkGi~IGng~~dp 234 (478)
..+.++++..|+...+++|... ...+.|+|||.||-.+--.|..|.+..-. ....+++.-+..|.|-+..
T Consensus 273 ~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN 347 (518)
T PLN02719 273 FSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGN 347 (518)
T ss_pred hhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccC
Confidence 4567788889999888888642 34799999999999999999888764211 1123446667777776654
No 143
>COG0627 Predicted esterase [General function prediction only]
Probab=75.46 E-value=9.9 Score=38.03 Aligned_cols=131 Identities=21% Similarity=0.198 Sum_probs=73.2
Q ss_pred CCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCc--cccC-CCCcccccceeeeccCCCcccCCccCCCCCcccChH
Q 011738 89 QEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRG--LQFN-PYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDD 165 (478)
Q Consensus 89 ~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~--~~~n-~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~ 165 (478)
..+..|+|+.+|..|..- ++.+.++++-..+... +.-+ -.-+....++--|+ |+|.|.|+-.+-..-+. ...
T Consensus 51 ~~~ipV~~~l~G~t~~~~---~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~-~~~ 125 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEP---NVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPW-ASG 125 (316)
T ss_pred CCCCCEEEEeCCCCCCCC---ceEeccchhhhhhhcCeEEecCCCCcccCCCCccccc-cCCCccceecccccCcc-ccC
Confidence 345556666677888741 3344445443332211 1112 33355555666666 68999997543322110 111
Q ss_pred HHHHHHHHHH-----HHHHHhCCCCCC-CcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCch
Q 011738 166 FTANDSYTFL-----HKWFLKFPSYRR-RTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (478)
Q Consensus 166 ~~a~~~~~~l-----~~F~~~fp~~~~-~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~ 235 (478)
.-+.+.|| ..+.+.||.-.+ ..-.|+|+|+||+=+-.+|.+-.++ ++.++=-+|+++|.
T Consensus 126 --~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~---------f~~~sS~Sg~~~~s 190 (316)
T COG0627 126 --PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDR---------FKSASSFSGILSPS 190 (316)
T ss_pred --ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcch---------hceecccccccccc
Confidence 12222222 234455663322 3678999999999888888776543 77777778888875
No 144
>PLN02324 triacylglycerol lipase
Probab=75.38 E-value=9 Score=39.59 Aligned_cols=70 Identities=9% Similarity=0.063 Sum_probs=49.3
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCC------CCceeeeeeeEecCCCCCc
Q 011738 164 DDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKD------PSLYIDLKGILLGNPETST 234 (478)
Q Consensus 164 ~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~------~~~~inLkGi~IGng~~dp 234 (478)
...+.+++...|+.+.+++|.. ...+.++|||.||-.+--.|..|.+.... ....+++.-+.-|.|-+..
T Consensus 192 k~SareqVl~eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRVGN 267 (415)
T PLN02324 192 TTSAQEQVQGELKRLLELYKNE-EISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRIGD 267 (415)
T ss_pred hhHHHHHHHHHHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCcCC
Confidence 3456778888888888888753 23699999999999998888888764211 0124456666677776654
No 145
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=75.21 E-value=19 Score=36.52 Aligned_cols=133 Identities=17% Similarity=0.247 Sum_probs=84.8
Q ss_pred CceEEEEEEEec--CCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcc--cccceeeeccCCCcc
Q 011738 74 GRALFYWFYEAM--TRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWN--KEANMLFLESPIGVG 149 (478)
Q Consensus 74 ~~~lfy~f~es~--~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~--~~~~~l~iD~PvG~G 149 (478)
|-+++|.-..-. ...++--.+|.++|=||+= -=|.-+=|..-++. .++-. -.+.||---.| |.|
T Consensus 133 GL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv----~EFykfIPlLT~p~-------~hg~~~d~~FEVI~PSlP-Gyg 200 (469)
T KOG2565|consen 133 GLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSV----REFYKFIPLLTDPK-------RHGNESDYAFEVIAPSLP-GYG 200 (469)
T ss_pred ceeEEEEEecCCccccCCcccceEEecCCCchH----HHHHhhhhhhcCcc-------ccCCccceeEEEeccCCC-Ccc
Confidence 457888865332 1233334467799999973 33444445444432 12211 23577777778 999
Q ss_pred cCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecC
Q 011738 150 FSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGN 229 (478)
Q Consensus 150 fSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGn 229 (478)
+|-+.+..++ +..++|.-+...+. ++.-++|||=|--||.....-+|....+ |+.|+=+-+
T Consensus 201 wSd~~sk~GF---n~~a~ArvmrkLMl-------RLg~nkffiqGgDwGSiI~snlasLyPe---------nV~GlHlnm 261 (469)
T KOG2565|consen 201 WSDAPSKTGF---NAAATARVMRKLML-------RLGYNKFFIQGGDWGSIIGSNLASLYPE---------NVLGLHLNM 261 (469)
T ss_pred cCcCCccCCc---cHHHHHHHHHHHHH-------HhCcceeEeecCchHHHHHHHHHhhcch---------hhhHhhhcc
Confidence 9987766665 77888887777665 4556789998877887766666665544 477777777
Q ss_pred CCCCchhh
Q 011738 230 PETSTAED 237 (478)
Q Consensus 230 g~~dp~~~ 237 (478)
..+.+...
T Consensus 262 ~~~~s~~s 269 (469)
T KOG2565|consen 262 CFVNSPFS 269 (469)
T ss_pred cccCCcHH
Confidence 77776543
No 146
>PRK14566 triosephosphate isomerase; Provisional
Probab=74.94 E-value=7.7 Score=37.58 Aligned_cols=61 Identities=16% Similarity=0.305 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCch
Q 011738 165 DFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (478)
Q Consensus 165 ~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~ 235 (478)
.+.|+++..|+++++...-......+=|. |||---|.-+..|.++.+ +.|++||..-+++.
T Consensus 188 ~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~d-------IDG~LVGgASL~~~ 248 (260)
T PRK14566 188 PEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQPD-------VDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcCCC-------CCeEEechHhcCHH
Confidence 45588899999998864321112223333 999999999999988754 99999999999884
No 147
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=74.83 E-value=3.9 Score=37.57 Aligned_cols=65 Identities=22% Similarity=0.268 Sum_probs=45.9
Q ss_pred ceeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHH
Q 011738 138 NMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHD 211 (478)
Q Consensus 138 ~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~ 211 (478)
..|-.|=- |||-|-+.-+.+. .+.+.|....+.++ ..+|+-+ .+.++|-|+|+..+..+|.+..+
T Consensus 62 atlRfNfR-gVG~S~G~fD~Gi---GE~~Da~aaldW~~---~~hp~s~--~~~l~GfSFGa~Ia~~la~r~~e 126 (210)
T COG2945 62 ATLRFNFR-GVGRSQGEFDNGI---GELEDAAAALDWLQ---ARHPDSA--SCWLAGFSFGAYIAMQLAMRRPE 126 (210)
T ss_pred eEEeeccc-ccccccCcccCCc---chHHHHHHHHHHHH---hhCCCch--hhhhcccchHHHHHHHHHHhccc
Confidence 34445544 9999987765554 56666777777777 4788532 36999999999877777777644
No 148
>PLN02934 triacylglycerol lipase
Probab=74.50 E-value=7.9 Score=40.92 Aligned_cols=41 Identities=12% Similarity=0.162 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHh
Q 011738 169 NDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDR 212 (478)
Q Consensus 169 ~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~ 212 (478)
.++...|+++.+.+|. .+++++|||.||..+--.|..+..+
T Consensus 305 ~~v~~~lk~ll~~~p~---~kIvVTGHSLGGALAtLaA~~L~l~ 345 (515)
T PLN02934 305 YAVRSKLKSLLKEHKN---AKFVVTGHSLGGALAILFPTVLVLQ 345 (515)
T ss_pred HHHHHHHHHHHHHCCC---CeEEEeccccHHHHHHHHHHHHHHh
Confidence 3577888888888885 4799999999999888888776543
No 149
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=73.73 E-value=13 Score=35.22 Aligned_cols=62 Identities=13% Similarity=0.056 Sum_probs=47.3
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCC
Q 011738 163 GDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (478)
Q Consensus 163 ~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 231 (478)
+..+-++.+.+.+..+.. ..+++.++|.|-|+.-+-..+.++.+.... ..-+++-+++||+.
T Consensus 28 Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~--~~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 28 SVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDP--PPDDLSFVLIGNPR 89 (225)
T ss_pred HHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCC--CcCceEEEEecCCC
Confidence 666777778888887654 478999999999998888888888775321 11468999999985
No 150
>PRK14567 triosephosphate isomerase; Provisional
Probab=72.90 E-value=9.9 Score=36.70 Aligned_cols=61 Identities=18% Similarity=0.225 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCch
Q 011738 165 DFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (478)
Q Consensus 165 ~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~ 235 (478)
.+.++++..++++++..+-+-....+-|. |||---|.=+..|.+..+ +.|++||.+.+++.
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~~d-------iDG~LVGgasL~~~ 238 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSLPD-------VDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcCCC-------CCEEEeehhhhcHH
Confidence 45678888999998875421112233333 999999999999988644 99999999999874
No 151
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=72.66 E-value=6 Score=38.03 Aligned_cols=60 Identities=18% Similarity=0.230 Sum_probs=45.7
Q ss_pred CCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCcccccCCChHHHHHHHHH
Q 011738 387 GLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHAVPVFKPSDSLALFSS 466 (478)
Q Consensus 387 ~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHmvP~dqP~~a~~mi~~ 466 (478)
..+|||++|..|-++|+.-..+.....+ +.....+|+||||--..--| .-.+.+++
T Consensus 192 ~~PVLiiHgtdDevv~~sHg~~Lye~~k-----------------------~~~epl~v~g~gH~~~~~~~-~yi~~l~~ 247 (258)
T KOG1552|consen 192 TCPVLIIHGTDDEVVDFSHGKALYERCK-----------------------EKVEPLWVKGAGHNDIELYP-EYIEHLRR 247 (258)
T ss_pred cCCEEEEecccCceecccccHHHHHhcc-----------------------ccCCCcEEecCCCcccccCH-HHHHHHHH
Confidence 4699999999999999997777665533 12455789999999877766 56677777
Q ss_pred HHcC
Q 011738 467 FLLG 470 (478)
Q Consensus 467 fl~~ 470 (478)
|+..
T Consensus 248 f~~~ 251 (258)
T KOG1552|consen 248 FISS 251 (258)
T ss_pred HHHH
Confidence 7754
No 152
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=72.31 E-value=8.3 Score=37.62 Aligned_cols=39 Identities=21% Similarity=0.278 Sum_probs=31.1
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccc
Q 011738 163 GDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRY 201 (478)
Q Consensus 163 ~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~y 201 (478)
...++++.+++.+..-....|+=..-++|++|||-|..=
T Consensus 84 ~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g 122 (289)
T PF10081_consen 84 AAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYG 122 (289)
T ss_pred hHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccc
Confidence 355678889999988888888765557999999988653
No 153
>PLN02761 lipase class 3 family protein
Probab=72.11 E-value=10 Score=40.19 Aligned_cols=71 Identities=8% Similarity=0.054 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHHHHHHHhCCCC-C--CCcEEEEeccCCccchHHHHHHHHHhcCC----CCceeeeeeeEecCCCCCc
Q 011738 164 DDFTANDSYTFLHKWFLKFPSY-R--RRTFYIAGESYAGRYIPELTELIHDRNKD----PSLYIDLKGILLGNPETST 234 (478)
Q Consensus 164 ~~~~a~~~~~~l~~F~~~fp~~-~--~~~~~i~GeSYgG~yvp~la~~i~~~n~~----~~~~inLkGi~IGng~~dp 234 (478)
...+.++++..++...+.+|.. + ...++++|||.||-.+--.|..|...+-. ....+++.-+..|.|=+..
T Consensus 267 k~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN 344 (527)
T PLN02761 267 SFSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGN 344 (527)
T ss_pred chhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCC
Confidence 3456778888888888877532 1 23699999999999999888888754221 1234556677777776654
No 154
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=70.32 E-value=19 Score=36.18 Aligned_cols=140 Identities=16% Similarity=0.155 Sum_probs=66.0
Q ss_pred CceEEEEEEEecCCCCCCCceEEeCCCCChhhhhhh---hhcccCCeEEcCC--CCc-cccCCCCcccccceeeeccCCC
Q 011738 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYG---ATQEIGPFLVDTD--GRG-LQFNPYAWNKEANMLFLESPIG 147 (478)
Q Consensus 74 ~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g---~~~E~GP~~~~~~--~~~-~~~n~~sw~~~~~~l~iD~PvG 147 (478)
+..++=|++.-.+.....|.||.++|..|.+.. .. .+...|=..+..| |.. ....+... ..+..
T Consensus 66 g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~-~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~---------~~~~~ 135 (320)
T PF05448_consen 66 GSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGD-PFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGS---------SGGTL 135 (320)
T ss_dssp GEEEEEEEEEES-SSSSEEEEEEE--TT--GGG-HHHHHHHHHTT-EEEEE--TTTSSSS-B-SSB---------SSS-S
T ss_pred CCEEEEEEEecCCCCCCcCEEEEecCCCCCCCC-cccccccccCCeEEEEecCCCCCCCCCCcccc---------CCCCC
Confidence 456666666555456788999999999877544 21 2333343332221 110 00000000 11111
Q ss_pred cccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEe
Q 011738 148 VGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILL 227 (478)
Q Consensus 148 ~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~I 227 (478)
-|+-.-...+...+.=-..+..|.+.++ +|+...|+.-.+++.++|+|-||...-.+|. +-++ ++.++.
T Consensus 136 ~g~~~~g~~~~~e~~yyr~~~~D~~rav-d~l~slpevD~~rI~v~G~SqGG~lal~~aa-Ld~r---------v~~~~~ 204 (320)
T PF05448_consen 136 KGHITRGIDDNPEDYYYRRVYLDAVRAV-DFLRSLPEVDGKRIGVTGGSQGGGLALAAAA-LDPR---------VKAAAA 204 (320)
T ss_dssp SSSTTTTTTS-TTT-HHHHHHHHHHHHH-HHHHTSTTEEEEEEEEEEETHHHHHHHHHHH-HSST----------SEEEE
T ss_pred ccHHhcCccCchHHHHHHHHHHHHHHHH-HHHHhCCCcCcceEEEEeecCchHHHHHHHH-hCcc---------ccEEEe
Confidence 2221100000000000112233444433 3566789998889999999999987777765 3222 888888
Q ss_pred cCCCCCc
Q 011738 228 GNPETST 234 (478)
Q Consensus 228 Gng~~dp 234 (478)
..|++..
T Consensus 205 ~vP~l~d 211 (320)
T PF05448_consen 205 DVPFLCD 211 (320)
T ss_dssp ESESSSS
T ss_pred cCCCccc
Confidence 7776543
No 155
>PLN00413 triacylglycerol lipase
Probab=70.27 E-value=5 Score=42.05 Aligned_cols=39 Identities=21% Similarity=0.294 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHH
Q 011738 170 DSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHD 211 (478)
Q Consensus 170 ~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~ 211 (478)
++.+.|+++++.+| +.+++++|||.||..+-..|..+..
T Consensus 269 ~i~~~Lk~ll~~~p---~~kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNP---TSKFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCC---CCeEEEEecCHHHHHHHHHHHHHHh
Confidence 56777888888888 4579999999999998888876654
No 156
>PRK11071 esterase YqiA; Provisional
Probab=70.07 E-value=11 Score=34.64 Aligned_cols=92 Identities=18% Similarity=0.216 Sum_probs=55.4
Q ss_pred CceEEeCCCCChhhhhhh--hhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccChHHHHH
Q 011738 92 PLVLWLNGGPGCSSVGYG--ATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTAN 169 (478)
Q Consensus 92 P~~lwl~GGPG~ss~~~g--~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~ 169 (478)
|.||+++|-+|++.. +- .+.+ .+..+ ....+++.+|.| |.| ++.++
T Consensus 2 p~illlHGf~ss~~~-~~~~~~~~-----------~l~~~----~~~~~v~~~dl~-g~~---------------~~~~~ 49 (190)
T PRK11071 2 STLLYLHGFNSSPRS-AKATLLKN-----------WLAQH----HPDIEMIVPQLP-PYP---------------ADAAE 49 (190)
T ss_pred CeEEEECCCCCCcch-HHHHHHHH-----------HHHHh----CCCCeEEeCCCC-CCH---------------HHHHH
Confidence 689999998887664 32 1111 01100 013467889988 432 12344
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 170 DSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 170 ~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
+ +.++.+. +..++++|+|+|+||.++..+|.+. + .+ +++.||.++|
T Consensus 50 ~----l~~l~~~---~~~~~~~lvG~S~Gg~~a~~~a~~~---------~--~~-~vl~~~~~~~ 95 (190)
T PRK11071 50 L----LESLVLE---HGGDPLGLVGSSLGGYYATWLSQCF---------M--LP-AVVVNPAVRP 95 (190)
T ss_pred H----HHHHHHH---cCCCCeEEEEECHHHHHHHHHHHHc---------C--CC-EEEECCCCCH
Confidence 3 4444443 3356899999999999999888753 1 12 4566776665
No 157
>PLN02408 phospholipase A1
Probab=69.63 E-value=7.1 Score=39.71 Aligned_cols=65 Identities=12% Similarity=0.050 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 166 FTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 166 ~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
.+.+++.+.++.+.+.+|.. ...++++|||.||-.+--.|..|.+.-.. ...+.-+.-|.|-+..
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~~~~---~~~V~v~tFGsPRVGN 243 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTTFKR---APMVTVISFGGPRVGN 243 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHhcCC---CCceEEEEcCCCCccc
Confidence 45677888888888888864 34699999999999998888888764211 0124455566555443
No 158
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=69.42 E-value=7.9 Score=36.39 Aligned_cols=50 Identities=20% Similarity=0.215 Sum_probs=37.7
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhc
Q 011738 163 GDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRN 213 (478)
Q Consensus 163 ~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n 213 (478)
+.+..++.+.+.|.+..+..+.- .+++.++|||.||-++-.....+.++.
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~~ 103 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDKP 103 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhcc
Confidence 45667788888888777655432 468999999999999987777666654
No 159
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=68.70 E-value=7 Score=40.06 Aligned_cols=63 Identities=24% Similarity=0.322 Sum_probs=38.0
Q ss_pred ccceeeec-------cCCCcccCCccCC-CCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccch
Q 011738 136 EANMLFLE-------SPIGVGFSYSNTT-NDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYI 202 (478)
Q Consensus 136 ~~~~l~iD-------~PvG~GfSy~~~~-~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yv 202 (478)
.|-|||++ +|.|.- ||.+.. -.+. +.+|+-.|+...| .++++...=+..|++.+|-||||..+
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgyL--tseQALADfA~ll-~~lK~~~~a~~~pvIafGGSYGGMLa 181 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQ-SYKDARHLGYL--TSEQALADFAELL-TFLKRDLSAEASPVIAFGGSYGGMLA 181 (492)
T ss_pred CceEEEeehhccccCCCCcch-hccChhhhccc--cHHHHHHHHHHHH-HHHhhccccccCcEEEecCchhhHHH
Confidence 46788887 455554 443321 1232 5566655655544 45554443347799999999999443
No 160
>PLN02802 triacylglycerol lipase
Probab=68.54 E-value=12 Score=39.65 Aligned_cols=65 Identities=8% Similarity=0.077 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 166 FTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 166 ~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
.+.+++.+-++.+.+++|.- ...++|+|||.||-.+--.|..|...... .+++.-+.-|.|-+..
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~~~---~~pV~vyTFGsPRVGN 373 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCVPA---APPVAVFSFGGPRVGN 373 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhCCC---CCceEEEEcCCCCccc
Confidence 45667888888888877642 23699999999999999888888665321 1245566667666544
No 161
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=68.27 E-value=11 Score=35.89 Aligned_cols=65 Identities=18% Similarity=0.178 Sum_probs=40.1
Q ss_pred cceeeeccCCCcccCCccCCCCCcccChHHH-HHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHH
Q 011738 137 ANMLFLESPIGVGFSYSNTTNDYEMLGDDFT-ANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELT 206 (478)
Q Consensus 137 ~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~-a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la 206 (478)
+.+|-.|-- |.|-|.....+.... .-.+- -.|+-..|..-=+.-| ..|.|..||||||+-.--++
T Consensus 58 f~Vlt~dyR-G~g~S~p~~~~~~~~-~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~~ 123 (281)
T COG4757 58 FEVLTFDYR-GIGQSRPASLSGSQW-RYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLLG 123 (281)
T ss_pred ceEEEEecc-cccCCCccccccCcc-chhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeecccc
Confidence 578888877 999997665543322 33332 2344444433223334 67999999999998554433
No 162
>PLN02847 triacylglycerol lipase
Probab=67.27 E-value=10 Score=40.85 Aligned_cols=54 Identities=19% Similarity=0.304 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecC
Q 011738 169 NDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGN 229 (478)
Q Consensus 169 ~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGn 229 (478)
+.+...|++-+..+|.| ++.|+|||.||-.+.-++..+.++.. ..++..+..|.
T Consensus 235 ~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~~~----fssi~CyAFgP 288 (633)
T PLN02847 235 KLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQKE----FSSTTCVTFAP 288 (633)
T ss_pred HHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcCCC----CCCceEEEecC
Confidence 33444555556678865 79999999999988777766543321 23455666654
No 163
>PLN02310 triacylglycerol lipase
Probab=64.92 E-value=14 Score=38.07 Aligned_cols=65 Identities=9% Similarity=0.046 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHhCCCC-CCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 166 FTANDSYTFLHKWFLKFPSY-RRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 166 ~~a~~~~~~l~~F~~~fp~~-~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
.+.+++.+.++...+.+++- ....+.|+|||.||-.+--.|..|.... ..+++.-+..|.|-+..
T Consensus 186 sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~----~~~~v~vyTFGsPRVGN 251 (405)
T PLN02310 186 SASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI----PDLFVSVISFGAPRVGN 251 (405)
T ss_pred hHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC----cCcceeEEEecCCCccc
Confidence 45566777777777666431 2347999999999999988887775532 23445666777776653
No 164
>PLN02162 triacylglycerol lipase
Probab=64.83 E-value=8.7 Score=40.22 Aligned_cols=40 Identities=10% Similarity=0.164 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHH
Q 011738 169 NDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHD 211 (478)
Q Consensus 169 ~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~ 211 (478)
..+.+.|++++.++| +.+++++|||.||-.+--.|..+..
T Consensus 262 ~~I~~~L~~lL~k~p---~~kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 262 YTIRQMLRDKLARNK---NLKYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred HHHHHHHHHHHHhCC---CceEEEEecChHHHHHHHHHHHHHH
Confidence 345667777777777 4579999999999988777776654
No 165
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=64.33 E-value=9.9 Score=35.61 Aligned_cols=45 Identities=16% Similarity=0.256 Sum_probs=35.2
Q ss_pred HHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCC
Q 011738 177 KWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (478)
Q Consensus 177 ~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 231 (478)
+|++.+|+...+++-|.|-|.||-.+..+|.++. .++.++..||.
T Consensus 11 ~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~----------~i~avVa~~ps 55 (213)
T PF08840_consen 11 DWLKSHPEVDPDKIGIIGISKGAELALLLASRFP----------QISAVVAISPS 55 (213)
T ss_dssp HHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS----------SEEEEEEES--
T ss_pred HHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC----------CccEEEEeCCc
Confidence 4667899988889999999999999999998874 28888887775
No 166
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=63.97 E-value=13 Score=35.15 Aligned_cols=51 Identities=18% Similarity=0.265 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 011738 171 SYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNP 230 (478)
Q Consensus 171 ~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng 230 (478)
-.++++...+.++ + +++++|||=||..+-+.|..+.+..+ -.++.+..-||
T Consensus 71 A~~yl~~~~~~~~---~-~i~v~GHSkGGnLA~yaa~~~~~~~~-----~rI~~vy~fDg 121 (224)
T PF11187_consen 71 ALAYLKKIAKKYP---G-KIYVTGHSKGGNLAQYAAANCDDEIQ-----DRISKVYSFDG 121 (224)
T ss_pred HHHHHHHHHHhCC---C-CEEEEEechhhHHHHHHHHHccHHHh-----hheeEEEEeeC
Confidence 3455666666555 3 59999999999999998888654321 12555555444
No 167
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=63.77 E-value=3.9 Score=37.27 Aligned_cols=15 Identities=40% Similarity=1.008 Sum_probs=13.3
Q ss_pred CCCCceEEeCCCCCh
Q 011738 89 QEKPLVLWLNGGPGC 103 (478)
Q Consensus 89 ~~~P~~lwl~GGPG~ 103 (478)
.+.|.|||+-|||||
T Consensus 5 ~~~~~IifVlGGPGs 19 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGS 19 (195)
T ss_pred ccCCCEEEEEcCCCC
Confidence 467999999999997
No 168
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=62.55 E-value=59 Score=34.34 Aligned_cols=71 Identities=21% Similarity=0.171 Sum_probs=47.5
Q ss_pred cceeeeccCCCcccCCccCC---CCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHH
Q 011738 137 ANMLFLESPIGVGFSYSNTT---NDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTEL 208 (478)
Q Consensus 137 ~~~l~iD~PvG~GfSy~~~~---~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~ 208 (478)
|.++.++.. =.|-|..... .+..-.+.+++-.|+.+|++..-.+|+.-.+.+++.+|-||.|....=+-..
T Consensus 119 A~v~~lEHR-FYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~ 192 (514)
T KOG2182|consen 119 ATVFQLEHR-FYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREK 192 (514)
T ss_pred CeeEEeeee-ccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHh
Confidence 567777765 4554432211 1122237888999999999888888876655699999999999654444333
No 169
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=61.09 E-value=22 Score=32.38 Aligned_cols=67 Identities=15% Similarity=0.086 Sum_probs=39.8
Q ss_pred cccceeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhC-CCCCCCcEEEEeccCCccchHHHHHH
Q 011738 135 KEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKF-PSYRRRTFYIAGESYAGRYIPELTEL 208 (478)
Q Consensus 135 ~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~f-p~~~~~~~~i~GeSYgG~yvp~la~~ 208 (478)
+.+-|.|++-...-+......... --+..|.+|..|++.+=..+ | ...+-++|||||..-+-.-+..
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~~~~----~A~~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAASPG----YARAGAPRLARFLDGLRATHGP---DAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CeEEEEEcCCCCCCCccccccCch----HHHHHHHHHHHHHHHhhhhcCC---CCCEEEEEecchhHHHHHHhhh
Confidence 678888875443321111111111 23456777778887766555 4 4579999999998755444433
No 170
>PF03283 PAE: Pectinacetylesterase
Probab=61.02 E-value=66 Score=32.86 Aligned_cols=139 Identities=17% Similarity=0.156 Sum_probs=69.9
Q ss_pred CCCCCCceEEeCCCCChhhhhhhh----hcccCCeE-----EcCCC---CccccCCCCcccccceeeeccCCCcccCCcc
Q 011738 87 RPQEKPLVLWLNGGPGCSSVGYGA----TQEIGPFL-----VDTDG---RGLQFNPYAWNKEANMLFLESPIGVGFSYSN 154 (478)
Q Consensus 87 ~~~~~P~~lwl~GGPG~ss~~~g~----~~E~GP~~-----~~~~~---~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~ 154 (478)
....+-+||.|.||=.|.+. .-- .+++|-.. +..+| .....||.-++ .|++||=-=.|.-|+-..
T Consensus 46 g~~s~~~li~leGGG~C~~~-~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~~--wN~V~vpYC~Gd~~~G~~ 122 (361)
T PF03283_consen 46 GSGSNKWLIFLEGGGWCWDA-ETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFYN--WNHVFVPYCDGDSHSGDV 122 (361)
T ss_pred CCCCceEEEEeccchhcCCh-hHHhhhccCccccccchhhhccccccccCCcccCCcccc--ccEEEEEecCCccccCcc
Confidence 35577999999999888764 222 23444222 22222 11234663222 577777443333333211
Q ss_pred CCCCCcccChHHH-HHHHHHHHHHHHHh-CCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCC
Q 011738 155 TTNDYEMLGDDFT-ANDSYTFLHKWFLK-FPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (478)
Q Consensus 155 ~~~~~~~~~~~~~-a~~~~~~l~~F~~~-fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 232 (478)
...........-. ...+.++|...... +++ ..++.|+|.|-||.=+..-+.++.+.-.. ..+++++.=..-++
T Consensus 123 ~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~lp~---~~~v~~~~DsG~f~ 197 (361)
T PF03283_consen 123 EPVDYGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRLPS---SVKVKCLSDSGFFL 197 (361)
T ss_pred cccccCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHhcc---CceEEEeccccccc
Confidence 1011000001111 22233444444454 554 45799999999999888888888775321 23455444433333
Q ss_pred C
Q 011738 233 S 233 (478)
Q Consensus 233 d 233 (478)
|
T Consensus 198 d 198 (361)
T PF03283_consen 198 D 198 (361)
T ss_pred c
Confidence 3
No 171
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=60.95 E-value=17 Score=36.67 Aligned_cols=59 Identities=14% Similarity=0.190 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCC
Q 011738 170 DSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETS 233 (478)
Q Consensus 170 ~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d 233 (478)
.+.+-++.....+| +..++++|||-||.++.-.|..|...... ...+++=+--|-|-+.
T Consensus 156 ~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~--~~~~v~v~tFG~PRvG 214 (336)
T KOG4569|consen 156 GLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLK--TSSPVKVYTFGQPRVG 214 (336)
T ss_pred HHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCC--CCCceEEEEecCCCcc
Confidence 34444444556677 55899999999999999999999886432 2234555555655443
No 172
>PRK07868 acyl-CoA synthetase; Validated
Probab=60.40 E-value=19 Score=42.10 Aligned_cols=61 Identities=13% Similarity=0.046 Sum_probs=42.2
Q ss_pred CCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEE-EEEcCCcccccC---CChHHHHH
Q 011738 387 GLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTF-VTVRGAGHAVPV---FKPSDSLA 462 (478)
Q Consensus 387 ~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf-~~V~~AGHmvP~---dqP~~a~~ 462 (478)
..+||+..|..|.++|....+.+.+.+. +..+ ..+.++|||.+. .-|+...-
T Consensus 297 ~~P~L~i~G~~D~ivp~~~~~~l~~~i~------------------------~a~~~~~~~~~GH~g~~~g~~a~~~~wp 352 (994)
T PRK07868 297 TCPVLAFVGEVDDIGQPASVRGIRRAAP------------------------NAEVYESLIRAGHFGLVVGSRAAQQTWP 352 (994)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC------------------------CCeEEEEeCCCCCEeeeechhhhhhhCh
Confidence 5788888888888888887777766643 3333 456788888554 34556667
Q ss_pred HHHHHHcCC
Q 011738 463 LFSSFLLGD 471 (478)
Q Consensus 463 mi~~fl~~~ 471 (478)
.+.+||...
T Consensus 353 ~i~~wl~~~ 361 (994)
T PRK07868 353 TVADWVKWL 361 (994)
T ss_pred HHHHHHHHh
Confidence 777777643
No 173
>PLN02429 triosephosphate isomerase
Probab=60.07 E-value=22 Score=35.43 Aligned_cols=60 Identities=15% Similarity=0.232 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHh-CCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCch
Q 011738 166 FTANDSYTFLHKWFLK-FPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (478)
Q Consensus 166 ~~a~~~~~~l~~F~~~-fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~ 235 (478)
+.++.+..++++++.. +.+-....+-|. |||---|.-+..+..+.+ +.|++||.+.+++.
T Consensus 239 e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~~d-------iDG~LVGgASL~~~ 299 (315)
T PLN02429 239 QQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKEED-------IDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcCCC-------CCEEEeecceecHH
Confidence 4577888888888763 332212233333 999999999999987643 99999999998774
No 174
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=59.72 E-value=16 Score=37.00 Aligned_cols=121 Identities=15% Similarity=0.325 Sum_probs=71.9
Q ss_pred CCCCceEEeCCCCChhhhhhhhhcccCCeEE----cCCCCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccCh
Q 011738 89 QEKPLVLWLNGGPGCSSVGYGATQEIGPFLV----DTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGD 164 (478)
Q Consensus 89 ~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~----~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~ 164 (478)
..+-++++++| +.+=+|=+++|. ...+...+.=-+||-..+++ +||-|... +.
T Consensus 114 ~~k~vlvFvHG--------fNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l--------~~Yn~Dre-------S~ 170 (377)
T COG4782 114 SAKTVLVFVHG--------FNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSL--------LGYNYDRE-------ST 170 (377)
T ss_pred CCCeEEEEEcc--------cCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCee--------eecccchh-------hh
Confidence 56788999997 777777777762 22232233334566555552 23333211 23
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCchh
Q 011738 165 DFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTAE 236 (478)
Q Consensus 165 ~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~~ 236 (478)
.....++-.+|+..-+.-| ..+++|..||+|.-.+......+.-++.. ..+..++=+++-.|-+|-..
T Consensus 171 ~~Sr~aLe~~lr~La~~~~---~~~I~ilAHSMGtwl~~e~LrQLai~~~~-~l~~ki~nViLAaPDiD~DV 238 (377)
T COG4782 171 NYSRPALERLLRYLATDKP---VKRIYLLAHSMGTWLLMEALRQLAIRADR-PLPAKIKNVILAAPDIDVDV 238 (377)
T ss_pred hhhHHHHHHHHHHHHhCCC---CceEEEEEecchHHHHHHHHHHHhccCCc-chhhhhhheEeeCCCCChhh
Confidence 3333344444443333333 56899999999988777777766655442 14556888888888877653
No 175
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=59.09 E-value=22 Score=32.36 Aligned_cols=83 Identities=16% Similarity=0.273 Sum_probs=51.8
Q ss_pred ceeeeccCCCccc-CCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCC-
Q 011738 138 NMLFLESPIGVGF-SYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKD- 215 (478)
Q Consensus 138 ~~l~iD~PvG~Gf-Sy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~- 215 (478)
.+--|+-|+..+. +|.. +..+-++++...++++..+-| +.++.|.|-|=|+..+-..+.. ...
T Consensus 41 ~~~~V~YpA~~~~~~y~~--------S~~~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA~V~~~~~~~----~~l~ 105 (179)
T PF01083_consen 41 AVQGVEYPASLGPNSYGD--------SVAAGVANLVRLIEEYAARCP---NTKIVLAGYSQGAMVVGDALSG----DGLP 105 (179)
T ss_dssp EEEE--S---SCGGSCHH--------HHHHHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHH----TTSS
T ss_pred EEEecCCCCCCCcccccc--------cHHHHHHHHHHHHHHHHHhCC---CCCEEEEecccccHHHHHHHHh----ccCC
Confidence 4444667766665 3322 566778888999999999999 6799999999998877766655 110
Q ss_pred CCceeeeee-eEecCCCCCch
Q 011738 216 PSLYIDLKG-ILLGNPETSTA 235 (478)
Q Consensus 216 ~~~~inLkG-i~IGng~~dp~ 235 (478)
....-++.+ +.+|||.-.+.
T Consensus 106 ~~~~~~I~avvlfGdP~~~~~ 126 (179)
T PF01083_consen 106 PDVADRIAAVVLFGDPRRGAG 126 (179)
T ss_dssp HHHHHHEEEEEEES-TTTBTT
T ss_pred hhhhhhEEEEEEecCCcccCC
Confidence 011123666 58888876543
No 176
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=58.82 E-value=5.6 Score=37.29 Aligned_cols=48 Identities=21% Similarity=0.221 Sum_probs=29.1
Q ss_pred CCeEEEEecCCCcccChhh-HHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCcccc
Q 011738 387 GLRIWIYSGDTDGRVPVLS-TRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHAV 452 (478)
Q Consensus 387 ~irVLiY~Gd~D~i~n~~G-~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHmv 452 (478)
+-+||+.+|..|.+-|..- ++..+++|+=.+.. .+++.+...+|||++
T Consensus 115 ~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~------------------~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 115 KGPILLISGEDDQIWPSSEMAEQIEERLKAAGFP------------------HNVEHLSYPGAGHLI 163 (213)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----------------------EEEEETTB-S--
T ss_pred CCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCC------------------CcceEEEcCCCCcee
Confidence 6899999999999998775 44556667522211 157888999999996
No 177
>PLN02561 triosephosphate isomerase
Probab=58.60 E-value=22 Score=34.34 Aligned_cols=59 Identities=20% Similarity=0.292 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHH-hCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 166 FTANDSYTFLHKWFL-KFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 166 ~~a~~~~~~l~~F~~-~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
+.++++..++++++. .|..-....+-|. |||---|.-+..+.... ++.|++||.+.+|+
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~~-------~iDG~LVG~ASL~~ 239 (253)
T PLN02561 180 AQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQP-------DVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcCC-------CCCeEEEehHhhHH
Confidence 457778888888775 3432222334333 99999999999997764 49999999999987
No 178
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=58.21 E-value=80 Score=30.66 Aligned_cols=57 Identities=12% Similarity=0.009 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHh-CCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 168 ANDSYTFLHKWFLK-FPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 168 a~~~~~~l~~F~~~-fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
++.+.+-|.=|++. ++ ....+-.|+||||||-.+-.. ++++.+. +.-+++++|.+..
T Consensus 117 ~~fL~~~lkP~Ie~~y~-~~~~~~~i~GhSlGGLfvl~a---LL~~p~~------F~~y~~~SPSlWw 174 (264)
T COG2819 117 REFLTEQLKPFIEARYR-TNSERTAIIGHSLGGLFVLFA---LLTYPDC------FGRYGLISPSLWW 174 (264)
T ss_pred HHHHHHhhHHHHhcccc-cCcccceeeeecchhHHHHHH---HhcCcch------hceeeeecchhhh
Confidence 33444444445543 32 223458999999999876543 3333221 6667776665444
No 179
>PRK07868 acyl-CoA synthetase; Validated
Probab=58.15 E-value=18 Score=42.22 Aligned_cols=115 Identities=14% Similarity=0.085 Sum_probs=59.9
Q ss_pred CCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCccc-ccceeeeccCCCcccCCccCCCCCcccChHH
Q 011738 88 PQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNK-EANMLFLESPIGVGFSYSNTTNDYEMLGDDF 166 (478)
Q Consensus 88 ~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~-~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~~ 166 (478)
+...|.+|.++|-+..+.+ +-+.-++ ++. -...+ -..++-+| -|.|-... .... .+.++
T Consensus 64 ~~~~~plllvhg~~~~~~~-~d~~~~~----------s~v---~~L~~~g~~v~~~d----~G~~~~~~-~~~~-~~l~~ 123 (994)
T PRK07868 64 PPVGPPVLMVHPMMMSADM-WDVTRDD----------GAV---GILHRAGLDPWVID----FGSPDKVE-GGME-RNLAD 123 (994)
T ss_pred cCCCCcEEEECCCCCCccc-eecCCcc----------cHH---HHHHHCCCEEEEEc----CCCCChhH-cCcc-CCHHH
Confidence 3466899999998666555 3211100 000 00112 24677777 25442211 1111 13333
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 167 TANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 167 ~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
.+..+.++|..-- +....+++++|+|+||..+-.+|..- . .-.++++++.+.-+|.
T Consensus 124 ~i~~l~~~l~~v~----~~~~~~v~lvG~s~GG~~a~~~aa~~--~------~~~v~~lvl~~~~~d~ 179 (994)
T PRK07868 124 HVVALSEAIDTVK----DVTGRDVHLVGYSQGGMFCYQAAAYR--R------SKDIASIVTFGSPVDT 179 (994)
T ss_pred HHHHHHHHHHHHH----HhhCCceEEEEEChhHHHHHHHHHhc--C------CCccceEEEEeccccc
Confidence 3344444443211 11235899999999999887777641 1 1127888877666664
No 180
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=57.17 E-value=20 Score=35.52 Aligned_cols=71 Identities=11% Similarity=0.076 Sum_probs=42.5
Q ss_pred ChHHHHHHHHHHHHHHHHhCCC-CCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCchhh
Q 011738 163 GDDFTANDSYTFLHKWFLKFPS-YRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTAED 237 (478)
Q Consensus 163 ~~~~~a~~~~~~l~~F~~~fp~-~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~~~ 237 (478)
+.++.++++-++++-+-..... +...++.|+|||=|..=+-....+- +.. .....++|+|+-.|+-|....
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~---~~~-~~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSP---NPS-PSRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH----TT----CCCEEEEEEEEE---TTST
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhcc---Ccc-ccccceEEEEEeCCCCChhHh
Confidence 6778888888877766555322 3467899999999987666555443 211 113559999999998877543
No 181
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=56.28 E-value=25 Score=33.49 Aligned_cols=60 Identities=20% Similarity=0.284 Sum_probs=47.1
Q ss_pred CeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeC-CeEEEEEcCCcccccCCChH---HHHHH
Q 011738 388 LRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYA-GLTFVTVRGAGHAVPVFKPS---DSLAL 463 (478)
Q Consensus 388 irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~-~ltf~~V~~AGHmvP~dqP~---~a~~m 463 (478)
.++|+.+|..|.+++....+....... + ......+.+++|....+.+. .++.-
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 289 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAAR-----------------------ERPKKLLFVPGGGHIDLYDNPPAVEQALDK 289 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhc-----------------------cCCceEEEecCCccccccCccHHHHHHHHH
Confidence 899999999999999988877776644 2 46678888999999986655 56666
Q ss_pred HHHHHcC
Q 011738 464 FSSFLLG 470 (478)
Q Consensus 464 i~~fl~~ 470 (478)
+.+|+..
T Consensus 290 ~~~f~~~ 296 (299)
T COG1073 290 LAEFLER 296 (299)
T ss_pred HHHHHHH
Confidence 6677644
No 182
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=55.23 E-value=39 Score=33.87 Aligned_cols=125 Identities=22% Similarity=0.320 Sum_probs=69.2
Q ss_pred CceEEEEEEEecCCCCCCCceEEeCCCCChhhhhh-hhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCC
Q 011738 74 GRALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGY-GATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSY 152 (478)
Q Consensus 74 ~~~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~-g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy 152 (478)
+--.+.|.-. ......|++|-++|=-|.|.-.+ -.+.| .+... -..++-.+-- |-|.+-
T Consensus 60 ~~~~ldw~~~--p~~~~~P~vVl~HGL~G~s~s~y~r~L~~-----------~~~~r------g~~~Vv~~~R-gcs~~~ 119 (345)
T COG0429 60 GFIDLDWSED--PRAAKKPLVVLFHGLEGSSNSPYARGLMR-----------ALSRR------GWLVVVFHFR-GCSGEA 119 (345)
T ss_pred CEEEEeeccC--ccccCCceEEEEeccCCCCcCHHHHHHHH-----------HHHhc------CCeEEEEecc-cccCCc
Confidence 3456667431 12345599999999877754211 11111 12211 1356667755 777765
Q ss_pred ccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCC
Q 011738 153 SNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (478)
Q Consensus 153 ~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 231 (478)
.....-+.. ... +|+..||...-+.+| .++++.+|-|.||. .+|.++.++-+. .....++++-+|+
T Consensus 120 n~~p~~yh~-G~t---~D~~~~l~~l~~~~~---~r~~~avG~SLGgn---mLa~ylgeeg~d---~~~~aa~~vs~P~ 185 (345)
T COG0429 120 NTSPRLYHS-GET---EDIRFFLDWLKARFP---PRPLYAVGFSLGGN---MLANYLGEEGDD---LPLDAAVAVSAPF 185 (345)
T ss_pred ccCcceecc-cch---hHHHHHHHHHHHhCC---CCceEEEEecccHH---HHHHHHHhhccC---cccceeeeeeCHH
Confidence 433333321 222 455555554445677 78999999999995 456666665332 2225666666554
No 183
>PLN03037 lipase class 3 family protein; Provisional
Probab=54.93 E-value=27 Score=37.12 Aligned_cols=65 Identities=12% Similarity=0.117 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHhCCCC-CCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 167 TANDSYTFLHKWFLKFPSY-RRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 167 ~a~~~~~~l~~F~~~fp~~-~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
+.+++.+.++...+.+++. ....++|+|||.||-.+--.|..|...... ..++.-+.-|.|-+..
T Consensus 296 areQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~---~~~VtvyTFGsPRVGN 361 (525)
T PLN03037 296 ASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPA---LSNISVISFGAPRVGN 361 (525)
T ss_pred hHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCC---CCCeeEEEecCCCccC
Confidence 3456667777777766642 234699999999999998888777664321 0134445555555443
No 184
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=53.84 E-value=38 Score=32.54 Aligned_cols=59 Identities=19% Similarity=0.328 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHH-hCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCch
Q 011738 166 FTANDSYTFLHKWFL-KFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (478)
Q Consensus 166 ~~a~~~~~~l~~F~~-~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~ 235 (478)
+.++++..++++++. .+.+ ....+-|. |||---|.=+..+.+..+ +.|++||.+.+++.
T Consensus 176 ~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~~-------vDG~LVG~Asl~~~ 235 (242)
T cd00311 176 EQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQPD-------IDGVLVGGASLKAE 235 (242)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCCC-------CCEEEeehHhhCHH
Confidence 447778888888885 3433 23334343 999999999999988643 99999999998763
No 185
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=53.53 E-value=12 Score=38.63 Aligned_cols=41 Identities=5% Similarity=0.010 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHH
Q 011738 166 FTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIH 210 (478)
Q Consensus 166 ~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~ 210 (478)
+.+..+...+++-++ ..++++.|+|||+||.++-.+-....
T Consensus 101 ~~~~~lk~~ie~~~~----~~~~kv~li~HSmGgl~~~~fl~~~~ 141 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYK----KNGKKVVLIAHSMGGLVARYFLQWMP 141 (389)
T ss_pred HHHHHHHHHHHHHHH----hcCCcEEEEEeCCCchHHHHHHHhcc
Confidence 334444444444443 22789999999999998888777663
No 186
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=53.28 E-value=22 Score=32.02 Aligned_cols=43 Identities=21% Similarity=0.323 Sum_probs=34.2
Q ss_pred CeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCcccccCC
Q 011738 388 LRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHAVPVF 455 (478)
Q Consensus 388 irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHmvP~d 455 (478)
++.+++..+.|..||+.-++.+.+.++ ..++.+.++||+-..+
T Consensus 115 ~~~~viaS~nDp~vp~~~a~~~A~~l~-------------------------a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 115 FPSIVIASDNDPYVPFERAQRLAQRLG-------------------------AELIILGGGGHFNAAS 157 (171)
T ss_dssp CCEEEEEETTBSSS-HHHHHHHHHHHT--------------------------EEEEETS-TTSSGGG
T ss_pred CCeEEEEcCCCCccCHHHHHHHHHHcC-------------------------CCeEECCCCCCccccc
Confidence 444899999999999999999998875 5679999999997653
No 187
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=51.86 E-value=19 Score=32.54 Aligned_cols=39 Identities=13% Similarity=0.042 Sum_probs=27.6
Q ss_pred CCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCC
Q 011738 187 RRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETS 233 (478)
Q Consensus 187 ~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~d 233 (478)
..+.+|+|||.|+.-+...+. .+ ..-+++|+++..|+-.
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l~--~~------~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWLA--EQ------SQKKVAGALLVAPFDP 92 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHHH--HT------CCSSEEEEEEES--SC
T ss_pred CCCeEEEEeCHHHHHHHHHHh--hc------ccccccEEEEEcCCCc
Confidence 568999999999876666554 22 2346999999999843
No 188
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=51.80 E-value=34 Score=34.40 Aligned_cols=74 Identities=20% Similarity=0.212 Sum_probs=49.1
Q ss_pred eeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCc
Q 011738 139 MLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSL 218 (478)
Q Consensus 139 ~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~ 218 (478)
+|=...| |.+-|.+.. +++ ++..+++.+..|--+= =.|+..+++|.|-|-||.-+...|.-
T Consensus 271 vLGwNhP-GFagSTG~P---~p~-n~~nA~DaVvQfAI~~----Lgf~~edIilygWSIGGF~~~waAs~---------- 331 (517)
T KOG1553|consen 271 VLGWNHP-GFAGSTGLP---YPV-NTLNAADAVVQFAIQV----LGFRQEDIILYGWSIGGFPVAWAASN---------- 331 (517)
T ss_pred eeccCCC-CccccCCCC---Ccc-cchHHHHHHHHHHHHH----cCCCccceEEEEeecCCchHHHHhhc----------
Confidence 3334458 877776543 444 6666666665554332 25567899999999999988877764
Q ss_pred eeeeeeeEecCCC
Q 011738 219 YIDLKGILLGNPE 231 (478)
Q Consensus 219 ~inLkGi~IGng~ 231 (478)
..++|++++-.-+
T Consensus 332 YPdVkavvLDAtF 344 (517)
T KOG1553|consen 332 YPDVKAVVLDATF 344 (517)
T ss_pred CCCceEEEeecch
Confidence 3459999884443
No 189
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=51.26 E-value=39 Score=32.70 Aligned_cols=38 Identities=18% Similarity=0.108 Sum_probs=27.0
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchH
Q 011738 163 GDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIP 203 (478)
Q Consensus 163 ~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp 203 (478)
+....|+-+..+|...-+ +|.=+.+.++|||+||.-+-
T Consensus 81 ~~~~qa~wl~~vl~~L~~---~Y~~~~~N~VGHSmGg~~~~ 118 (255)
T PF06028_consen 81 NYKKQAKWLKKVLKYLKK---KYHFKKFNLVGHSMGGLSWT 118 (255)
T ss_dssp HHHHHHHHHHHHHHHHHH---CC--SEEEEEEETHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH---hcCCCEEeEEEECccHHHHH
Confidence 456677777777776655 55567899999999996443
No 190
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=50.30 E-value=14 Score=34.49 Aligned_cols=49 Identities=20% Similarity=0.201 Sum_probs=32.1
Q ss_pred CCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCcccccCCChHH
Q 011738 387 GLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHAVPVFKPSD 459 (478)
Q Consensus 387 ~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHmvP~dqP~~ 459 (478)
.+++|-..|..|.+++...++...+... .. ..+.....||.||...+..
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~-----------------------~~-~~v~~h~gGH~vP~~~~~~ 209 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFD-----------------------PD-ARVIEHDGGHHVPRKKEDV 209 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHH-----------------------HH-EEEEEESSSSS----HHHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhcc-----------------------CC-cEEEEECCCCcCcCChhhc
Confidence 6999999999999999888877776643 12 5578889999999987653
No 191
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=50.13 E-value=23 Score=39.39 Aligned_cols=98 Identities=17% Similarity=0.158 Sum_probs=57.0
Q ss_pred CceEEeCCCCCh-------hhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccCh
Q 011738 92 PLVLWLNGGPGC-------SSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGD 164 (478)
Q Consensus 92 P~~lwl~GGPG~-------ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~ 164 (478)
=.||++-|--|+ .|. ..+-.-+||++=..+ .+||++. +. .-+|= .=-||-- ... ..
T Consensus 90 IPVLFIPGNAGSyKQvRSiAS~-a~n~y~~~~~e~t~~----~d~~~~~-DF---FaVDF--nEe~tAm-----~G~-~l 152 (973)
T KOG3724|consen 90 IPVLFIPGNAGSYKQVRSIASV-AQNAYQGGPFEKTED----RDNPFSF-DF---FAVDF--NEEFTAM-----HGH-IL 152 (973)
T ss_pred ceEEEecCCCCchHHHHHHHHH-HhhhhcCCchhhhhc----ccCcccc-ce---EEEcc--cchhhhh-----ccH-hH
Confidence 347888888775 233 244556789883332 3367666 22 22331 1112211 111 56
Q ss_pred HHHHHHHHHHHHHHHHh---CCCCC---CCcEEEEeccCCccchHHHH
Q 011738 165 DFTANDSYTFLHKWFLK---FPSYR---RRTFYIAGESYAGRYIPELT 206 (478)
Q Consensus 165 ~~~a~~~~~~l~~F~~~---fp~~~---~~~~~i~GeSYgG~yvp~la 206 (478)
.+++|.+.++++.-... -+||+ ...+.|.||||||.-+-+.+
T Consensus 153 ~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~ 200 (973)
T KOG3724|consen 153 LDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATL 200 (973)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHH
Confidence 77888888777755543 35565 56699999999997554433
No 192
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=49.89 E-value=49 Score=31.91 Aligned_cols=59 Identities=17% Similarity=0.306 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHH-hCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCch
Q 011738 166 FTANDSYTFLHKWFL-KFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (478)
Q Consensus 166 ~~a~~~~~~l~~F~~-~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~ 235 (478)
+.++++..++++++. .|.+- ...+-|. |||---|.-+..+.... ++.|++||.+.+++.
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~~~-~~~~~Il---YGGSV~~~N~~~l~~~~-------~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 180 EQAQEVHAFIRAVLAELYGEV-AEKVRIL---YGGSVKPDNAAELMAQP-------DIDGALVGGASLKAE 239 (250)
T ss_pred HHHHHHHHHHHHHHHHhcccc-cCCceEE---EcCCCCHHHHHHHhcCC-------CCCEEEEeeeeechH
Confidence 457788888888875 33311 2233333 99999999999997764 399999999998774
No 193
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=49.89 E-value=22 Score=31.85 Aligned_cols=29 Identities=17% Similarity=0.327 Sum_probs=24.5
Q ss_pred CCCCCcEEEEeccCCccchHHHHHHHHHh
Q 011738 184 SYRRRTFYIAGESYAGRYIPELTELIHDR 212 (478)
Q Consensus 184 ~~~~~~~~i~GeSYgG~yvp~la~~i~~~ 212 (478)
.+..-|++|-|+||||.....+|..+...
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~A~ 113 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQAP 113 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhcCC
Confidence 55567999999999999999999887553
No 194
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=49.46 E-value=18 Score=32.77 Aligned_cols=36 Identities=19% Similarity=0.289 Sum_probs=29.3
Q ss_pred CCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCC
Q 011738 187 RRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (478)
Q Consensus 187 ~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 231 (478)
.+|.||++||.|+.-|...+.++..+ +.|+++..|.
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~~---------V~GalLVApp 93 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQRQ---------VAGALLVAPP 93 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhhc---------cceEEEecCC
Confidence 56899999999997777777766543 9999998875
No 195
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=48.58 E-value=40 Score=32.64 Aligned_cols=63 Identities=21% Similarity=0.304 Sum_probs=38.1
Q ss_pred hHHHHHHHHHHHHHHHH-hC-----CCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCC
Q 011738 164 DDFTANDSYTFLHKWFL-KF-----PSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (478)
Q Consensus 164 ~~~~a~~~~~~l~~F~~-~f-----p~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 232 (478)
+.+.+.++.++|.+=++ .. |.+ .++.|+|||=||+-+-.+|....+ ....+++++++..+|+=
T Consensus 63 ~~~~~~~vi~Wl~~~L~~~l~~~v~~D~--s~l~l~GHSrGGk~Af~~al~~~~----~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 63 EVASAAEVIDWLAKGLESKLPLGVKPDF--SKLALAGHSRGGKVAFAMALGNAS----SSLDLRFSALILLDPVD 131 (259)
T ss_pred hHHHHHHHHHHHHhcchhhccccccccc--cceEEeeeCCCCHHHHHHHhhhcc----cccccceeEEEEecccc
Confidence 44456666666554111 22 232 369999999999955555543321 12356799999977763
No 196
>PLN02442 S-formylglutathione hydrolase
Probab=48.35 E-value=27 Score=34.16 Aligned_cols=49 Identities=18% Similarity=0.167 Sum_probs=36.4
Q ss_pred HcCCeEEEEecCCCcccChh-hHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCccccc
Q 011738 385 EAGLRIWIYSGDTDGRVPVL-STRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHAVP 453 (478)
Q Consensus 385 ~~~irVLiY~Gd~D~i~n~~-G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHmvP 453 (478)
+.+.+||+.+|+.|.+|+.. .++.+.+.++ + .| .+.++.+..|++|-..
T Consensus 215 ~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~--------------~-~g-----~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 215 DVSATILIDQGEADKFLKEQLLPENFEEACK--------------E-AG-----APVTLRLQPGYDHSYF 264 (283)
T ss_pred ccCCCEEEEECCCCccccccccHHHHHHHHH--------------H-cC-----CCeEEEEeCCCCccHH
Confidence 34689999999999999974 4666666654 0 01 2578899999999765
No 197
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=47.94 E-value=20 Score=37.46 Aligned_cols=73 Identities=22% Similarity=0.244 Sum_probs=47.4
Q ss_pred CeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeC---CeEEEEEcCCc---ccccCCChHHHH
Q 011738 388 LRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYA---GLTFVTVRGAG---HAVPVFKPSDSL 461 (478)
Q Consensus 388 irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~---~ltf~~V~~AG---HmvP~dqP~~a~ 461 (478)
++==++.||=|-.+|.... .+-+ +|.+.+.. .++. +.+.+. .+.+....|+- |+--.-.+ ...
T Consensus 374 ~~~~~~~~DGDgTVp~~S~--~~c~-~w~g~~~~-----~~~~--~~~~~~~~~~~~~~~~~G~~~a~Hv~ilg~~-~l~ 442 (473)
T KOG2369|consen 374 LKGGIFYGDGDGTVPLVSA--SMCA-NWQGKQFN-----AGIA--VTREEDKHQPVNLDESHGSSSAEHVDILGDE-ELL 442 (473)
T ss_pred ccCceeecCCCCccchHHH--Hhhh-hhhccccc-----cccc--cccccccCCCccccccCCccchhhhhhccCh-HHH
Confidence 4445889999999999988 4444 88887754 1222 333333 37777777777 77666655 556
Q ss_pred HHHHHHHcCC
Q 011738 462 ALFSSFLLGD 471 (478)
Q Consensus 462 ~mi~~fl~~~ 471 (478)
+.|.+.+.+.
T Consensus 443 e~i~k~~~g~ 452 (473)
T KOG2369|consen 443 EEILKVLLGA 452 (473)
T ss_pred HHHHHHhccC
Confidence 6666666553
No 198
>PTZ00333 triosephosphate isomerase; Provisional
Probab=47.77 E-value=41 Score=32.54 Aligned_cols=60 Identities=20% Similarity=0.339 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHHH-hCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCc
Q 011738 165 DFTANDSYTFLHKWFL-KFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETST 234 (478)
Q Consensus 165 ~~~a~~~~~~l~~F~~-~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp 234 (478)
.+.++++..++++++. .|.......+-|. |||---|.-+..+.... ++.|++||.+.+++
T Consensus 182 ~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~~-------~vDG~LvG~asl~~ 242 (255)
T PTZ00333 182 PEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQP-------DIDGFLVGGASLKP 242 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcCC-------CCCEEEEehHhhhh
Confidence 3557888888888775 3432222233333 99999999999997763 39999999998874
No 199
>PRK14565 triosephosphate isomerase; Provisional
Probab=47.18 E-value=43 Score=32.02 Aligned_cols=53 Identities=17% Similarity=0.306 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCch
Q 011738 165 DFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (478)
Q Consensus 165 ~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~ 235 (478)
.+.++.+..+++++. . ++-|. |||---|.-+..+.++.. +.|++||.+.+++.
T Consensus 173 ~e~i~~~~~~Ir~~~-------~-~~~Il---YGGSV~~~N~~~l~~~~~-------iDG~LvG~asl~~~ 225 (237)
T PRK14565 173 NDAIAEAFEIIRSYD-------S-KSHII---YGGSVNQENIRDLKSINQ-------LSGVLVGSASLDVD 225 (237)
T ss_pred HHHHHHHHHHHHHhC-------C-CceEE---EcCccCHhhHHHHhcCCC-------CCEEEEechhhcHH
Confidence 455778888888752 1 22222 999999999999988533 99999999999875
No 200
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=46.89 E-value=1e+02 Score=33.19 Aligned_cols=34 Identities=15% Similarity=0.205 Sum_probs=23.6
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHH
Q 011738 172 YTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELT 206 (478)
Q Consensus 172 ~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la 206 (478)
++++++.+..|-. -.+++-|+|||.||..|-.+.
T Consensus 180 L~wv~~~I~~FGG-dp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 180 LRWVKDNIPSFGG-DPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHHHHHHHHhcCC-CCCeEEEEeechhHHHHHHHh
Confidence 4566666666642 245799999999998875543
No 201
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=46.11 E-value=55 Score=30.86 Aligned_cols=58 Identities=24% Similarity=0.211 Sum_probs=43.9
Q ss_pred CCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCcccccCCCh--HHHHHHH
Q 011738 387 GLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHAVPVFKP--SDSLALF 464 (478)
Q Consensus 387 ~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHmvP~dqP--~~a~~mi 464 (478)
.++.|-+-|+.|.+++..-.+..+++-. +- .+..+.+||+||.-.| +...+.|
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~~------------------------~a-~vl~HpggH~VP~~~~~~~~i~~fi 217 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESFK------------------------DA-TVLEHPGGHIVPNKAKYKEKIADFI 217 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhcC------------------------CC-eEEecCCCccCCCchHHHHHHHHHH
Confidence 4788999999999999998888877743 11 4788999999998654 4455556
Q ss_pred HHHHc
Q 011738 465 SSFLL 469 (478)
Q Consensus 465 ~~fl~ 469 (478)
+.++.
T Consensus 218 ~~~~~ 222 (230)
T KOG2551|consen 218 QSFLQ 222 (230)
T ss_pred HHHHH
Confidence 65554
No 202
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=45.51 E-value=69 Score=30.12 Aligned_cols=56 Identities=18% Similarity=0.306 Sum_probs=34.6
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCC
Q 011738 163 GDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (478)
Q Consensus 163 ~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 231 (478)
+..+-|..+|..+- .|. +...++++.|||||.--..+..+.-..+. +-.|++-+..
T Consensus 171 t~veh~~yvw~~~v-----~pa-~~~sv~vvahsyGG~~t~~l~~~f~~d~~-------v~aialTDs~ 226 (297)
T KOG3967|consen 171 TPVEHAKYVWKNIV-----LPA-KAESVFVVAHSYGGSLTLDLVERFPDDES-------VFAIALTDSA 226 (297)
T ss_pred chHHHHHHHHHHHh-----ccc-CcceEEEEEeccCChhHHHHHHhcCCccc-------eEEEEeeccc
Confidence 45556666655443 232 35589999999999877666666544432 5566664443
No 203
>PF05049 IIGP: Interferon-inducible GTPase (IIGP); InterPro: IPR007743 Interferon-inducible GTPase (IIGP) is thought to play a role in in intracellular defence. IIGP is predominantly associated with the Golgi apparatus and also localizes to the endoplasmic reticulum and exerts a distinct role in IFN-induced intracellular membrane trafficking or processing [].; GO: 0005525 GTP binding, 0016817 hydrolase activity, acting on acid anhydrides, 0016020 membrane; PDB: 1TPZ_A 1TQD_A 1TQ6_A 1TQ2_B 1TQ4_A.
Probab=44.52 E-value=9.1 Score=39.16 Aligned_cols=59 Identities=25% Similarity=0.412 Sum_probs=35.2
Q ss_pred CCCCceEEeCCCCCh--hhhhhhhhcccCCeEEcCC-----CCccccCCCCcccccceeeeccCCCcc
Q 011738 89 QEKPLVLWLNGGPGC--SSVGYGATQEIGPFLVDTD-----GRGLQFNPYAWNKEANMLFLESPIGVG 149 (478)
Q Consensus 89 ~~~P~~lwl~GGPG~--ss~~~g~~~E~GP~~~~~~-----~~~~~~n~~sw~~~~~~l~iD~PvG~G 149 (478)
++.|+=|=+.|.+|+ ||+ +-+|-.+|+=.-..- ..+....+|.=-+.-|+.++|-| |+|
T Consensus 32 ~~~~l~IaV~G~sGsGKSSf-INalrGl~~~d~~aA~tGv~etT~~~~~Y~~p~~pnv~lWDlP-G~g 97 (376)
T PF05049_consen 32 DNAPLNIAVTGESGSGKSSF-INALRGLGHEDEGAAPTGVVETTMEPTPYPHPKFPNVTLWDLP-GIG 97 (376)
T ss_dssp HH--EEEEEEESTTSSHHHH-HHHHTT--TTSTTS--SSSHSCCTS-EEEE-SS-TTEEEEEE---GG
T ss_pred hcCceEEEEECCCCCCHHHH-HHHHhCCCCCCcCcCCCCCCcCCCCCeeCCCCCCCCCeEEeCC-CCC
Confidence 456788888888877 999 899988776221100 12345566666788899999999 998
No 204
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=44.28 E-value=3.3e+02 Score=27.02 Aligned_cols=54 Identities=6% Similarity=-0.013 Sum_probs=34.3
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCchh
Q 011738 172 YTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTAE 236 (478)
Q Consensus 172 ~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~~ 236 (478)
+..+..|...++ ..++.|.|++-|..++-.+ +.++. ....+++++.|+..-...
T Consensus 180 i~Aa~~~~~~~~---~~~ivlIg~G~gA~~~~~~----la~~~----~~~~daLV~I~a~~p~~~ 233 (310)
T PF12048_consen 180 IEAAIAFAQQQG---GKNIVLIGHGTGAGWAARY----LAEKP----PPMPDALVLINAYWPQPD 233 (310)
T ss_pred HHHHHHHHHhcC---CceEEEEEeChhHHHHHHH----HhcCC----CcccCeEEEEeCCCCcch
Confidence 344555666555 6679999999987655443 33322 233779999888765543
No 205
>COG4425 Predicted membrane protein [Function unknown]
Probab=44.20 E-value=44 Score=34.82 Aligned_cols=37 Identities=19% Similarity=0.364 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCcc
Q 011738 164 DDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGR 200 (478)
Q Consensus 164 ~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~ 200 (478)
-.++|+.+.+++-.....-|+=..-++|+.|||-|..
T Consensus 373 g~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 373 GADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred chhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 4568889999999988888987766899999999853
No 206
>COG5510 Predicted small secreted protein [Function unknown]
Probab=44.12 E-value=23 Score=24.06 Aligned_cols=21 Identities=14% Similarity=0.251 Sum_probs=12.8
Q ss_pred hHHHHHHHHHHHhhhhhhccC
Q 011738 7 MKVTICLTFCLLNALDVVSAK 27 (478)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~ 27 (478)
++.++.++++++.++.++.|-
T Consensus 3 k~t~l~i~~vll~s~llaaCN 23 (44)
T COG5510 3 KKTILLIALVLLASTLLAACN 23 (44)
T ss_pred hHHHHHHHHHHHHHHHHHHhh
Confidence 344445555666777777773
No 207
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=42.11 E-value=13 Score=38.16 Aligned_cols=38 Identities=18% Similarity=0.163 Sum_probs=22.7
Q ss_pred cEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCchh
Q 011738 189 TFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTAE 236 (478)
Q Consensus 189 ~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~~ 236 (478)
++.++||||||.-+-..+.. . ..++..++.+||.-|..
T Consensus 229 ~i~~~GHSFGGATa~~~l~~---d-------~r~~~~I~LD~W~~Pl~ 266 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALRQ---D-------TRFKAGILLDPWMFPLG 266 (379)
T ss_dssp EEEEEEETHHHHHHHHHHHH-----------TT--EEEEES---TTS-
T ss_pred heeeeecCchHHHHHHHHhh---c-------cCcceEEEeCCcccCCC
Confidence 69999999999655543332 2 12788889999998853
No 208
>KOG3101 consensus Esterase D [General function prediction only]
Probab=40.74 E-value=15 Score=34.31 Aligned_cols=67 Identities=10% Similarity=-0.089 Sum_probs=37.6
Q ss_pred CCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCchhhhhhhHHHhhhcccCCHHHHHHHHh
Q 011738 185 YRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTAEDWQGLVDYAWSHAVVSDETHKIILR 261 (478)
Q Consensus 185 ~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~~~~~~~~~~a~~~gli~~~~~~~~~~ 261 (478)
+-..+.-|+|||+|||=+..++.+=. -..|++---.|..+|..---..-.|.-..|- ++.++++...
T Consensus 138 ld~~k~~IfGHSMGGhGAl~~~Lkn~---------~kykSvSAFAPI~NP~~cpWGqKAf~gYLG~-~ka~W~~yDa 204 (283)
T KOG3101|consen 138 LDPLKVGIFGHSMGGHGALTIYLKNP---------SKYKSVSAFAPICNPINCPWGQKAFTGYLGD-NKAQWEAYDA 204 (283)
T ss_pred ccchhcceeccccCCCceEEEEEcCc---------ccccceeccccccCcccCcchHHHhhcccCC-ChHHHhhcch
Confidence 33456899999999996555543321 1367777777777776432222222223332 4555554433
No 209
>COG3150 Predicted esterase [General function prediction only]
Probab=40.64 E-value=43 Score=30.23 Aligned_cols=56 Identities=18% Similarity=0.180 Sum_probs=41.6
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCchhh
Q 011738 163 GDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTAED 237 (478)
Q Consensus 163 ~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~~~ 237 (478)
+..++++.+-+.++ ++..+..-|+|-|-||.|+--|+.+. -|+. +|.||.+-|...
T Consensus 41 ~p~~a~~ele~~i~-------~~~~~~p~ivGssLGGY~At~l~~~~-----------Gira-v~~NPav~P~e~ 96 (191)
T COG3150 41 DPQQALKELEKAVQ-------ELGDESPLIVGSSLGGYYATWLGFLC-----------GIRA-VVFNPAVRPYEL 96 (191)
T ss_pred CHHHHHHHHHHHHH-------HcCCCCceEEeecchHHHHHHHHHHh-----------CChh-hhcCCCcCchhh
Confidence 67777888777777 56667789999999999988887653 1333 356888888644
No 210
>PF14020 DUF4236: Protein of unknown function (DUF4236)
Probab=40.00 E-value=25 Score=25.36 Aligned_cols=15 Identities=33% Similarity=0.598 Sum_probs=12.2
Q ss_pred ceeeeccCCCcccCCc
Q 011738 138 NMLFLESPIGVGFSYS 153 (478)
Q Consensus 138 ~~l~iD~PvG~GfSy~ 153 (478)
..+.++-| |+|+||.
T Consensus 40 ~~~t~~iP-GtGlsyr 54 (55)
T PF14020_consen 40 RRTTVGIP-GTGLSYR 54 (55)
T ss_pred cEEEEEcC-CCccEEe
Confidence 45778889 9999984
No 211
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=39.78 E-value=28 Score=37.79 Aligned_cols=22 Identities=9% Similarity=0.132 Sum_probs=18.9
Q ss_pred CCcEEEEeccCCccchHHHHHH
Q 011738 187 RRTFYIAGESYAGRYIPELTEL 208 (478)
Q Consensus 187 ~~~~~i~GeSYgG~yvp~la~~ 208 (478)
++++.|+|||+||.++-.|-..
T Consensus 212 gkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHHh
Confidence 5799999999999888887664
No 212
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=38.08 E-value=5.6e+02 Score=27.87 Aligned_cols=66 Identities=8% Similarity=-0.016 Sum_probs=41.3
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCch
Q 011738 163 GDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (478)
Q Consensus 163 ~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~ 235 (478)
+.++-.+.+.++|+.--+.-. .+++.+.|.|.||.....++..+....+ .-.++++.+....+|..
T Consensus 266 ~ldDYv~~i~~Ald~V~~~tG---~~~vnl~GyC~GGtl~a~~~a~~aA~~~----~~~V~sltllatplDf~ 331 (560)
T TIGR01839 266 GLSTYVDALKEAVDAVRAITG---SRDLNLLGACAGGLTCAALVGHLQALGQ----LRKVNSLTYLVSLLDST 331 (560)
T ss_pred CHHHHHHHHHHHHHHHHHhcC---CCCeeEEEECcchHHHHHHHHHHHhcCC----CCceeeEEeeecccccC
Confidence 445544566666655433332 5689999999999999864443333311 11388888777777753
No 213
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=37.59 E-value=64 Score=35.59 Aligned_cols=61 Identities=18% Similarity=0.256 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHH-hCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCch
Q 011738 165 DFTANDSYTFLHKWFL-KFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (478)
Q Consensus 165 ~~~a~~~~~~l~~F~~-~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~ 235 (478)
.+.|++++.++++++. .|-+-....+=|. |||---|.-+..|..+.+ +.|++||...+++.
T Consensus 574 ~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~d-------iDG~LVGgASL~~~ 635 (645)
T PRK13962 574 PEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQPD-------IDGGLVGGASLKAQ 635 (645)
T ss_pred HHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcCCC-------CCeEEeehHhcCHH
Confidence 4568888999999885 3322212223233 999999999999988644 99999999998874
No 214
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=37.37 E-value=1.7e+02 Score=30.41 Aligned_cols=91 Identities=21% Similarity=0.250 Sum_probs=62.0
Q ss_pred CCCCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcccCCccCCCCCcccChH
Q 011738 86 TRPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDD 165 (478)
Q Consensus 86 ~~~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~~ 165 (478)
+...++|+|+...| +++-. .|.+- +-+=.=.+|.|+|+.- =.|=|.... .+....+..
T Consensus 58 Hk~~drPtV~~T~G--------Y~~~~--~p~r~----------Ept~Lld~NQl~vEhR-fF~~SrP~p-~DW~~Lti~ 115 (448)
T PF05576_consen 58 HKDFDRPTVLYTEG--------YNVST--SPRRS----------EPTQLLDGNQLSVEHR-FFGPSRPEP-ADWSYLTIW 115 (448)
T ss_pred EcCCCCCeEEEecC--------ccccc--Ccccc----------chhHhhccceEEEEEe-eccCCCCCC-CCcccccHh
Confidence 34567899999887 33322 23221 1111224799999987 566676544 344445889
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccch
Q 011738 166 FTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYI 202 (478)
Q Consensus 166 ~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yv 202 (478)
++|.|.+...+.|=..+| .+++-+|-|=||.-.
T Consensus 116 QAA~D~Hri~~A~K~iY~----~kWISTG~SKGGmTa 148 (448)
T PF05576_consen 116 QAASDQHRIVQAFKPIYP----GKWISTGGSKGGMTA 148 (448)
T ss_pred HhhHHHHHHHHHHHhhcc----CCceecCcCCCceeE
Confidence 999999999998866665 369999999999743
No 215
>PF06414 Zeta_toxin: Zeta toxin; InterPro: IPR010488 This entry represents a domain originally identified in bacterial zeta toxin proteins, where it comprises the whole protein []. It has subsequently been found in a number of other proteins, such as polynucleotide kinase and 2',3'-cyclic-nucleotide 3'-phosphodiesterase. It appears to function as a kinase domain [, ].; GO: 0005524 ATP binding, 0016301 kinase activity; PDB: 2P5T_H 1GVN_B 3Q8X_D.
Probab=37.15 E-value=20 Score=33.05 Aligned_cols=35 Identities=37% Similarity=0.673 Sum_probs=21.0
Q ss_pred CCCCCceEEeCCCCCh--hhhhhhhhcc-c---CCeEEcCCC
Q 011738 88 PQEKPLVLWLNGGPGC--SSVGYGATQE-I---GPFLVDTDG 123 (478)
Q Consensus 88 ~~~~P~~lwl~GGPG~--ss~~~g~~~E-~---GP~~~~~~~ 123 (478)
+...|+++.+-|+||| |++ ...+.+ . |...|+.|.
T Consensus 11 ~~~~P~~~i~aG~~GsGKSt~-~~~~~~~~~~~~~v~i~~D~ 51 (199)
T PF06414_consen 11 PQEKPTLIIIAGQPGSGKSTL-ARQLLEEFGGGGIVVIDADE 51 (199)
T ss_dssp --SS-EEEEEES-TTSTTHHH-HHHHHHHT-TT-SEEE-GGG
T ss_pred cccCCEEEEEeCCCCCCHHHH-HHHhhhhccCCCeEEEehHH
Confidence 5688999999999999 777 565555 2 344555553
No 216
>TIGR03598 GTPase_YsxC ribosome biogenesis GTP-binding protein YsxC/EngB. Members of this protein family are a GTPase associated with ribosome biogenesis, typified by YsxC from Bacillus subutilis. The family is widely but not universally distributed among bacteria. Members commonly are called EngB based on homology to EngA, one of several other GTPases of ribosome biogenesis. Cutoffs as set find essentially all bacterial members, but also identify large numbers of eukaryotic (probably organellar) sequences. This protein is found in about 80 percent of bacterial genomes.
Probab=35.69 E-value=94 Score=27.67 Aligned_cols=61 Identities=20% Similarity=0.287 Sum_probs=34.7
Q ss_pred CCCCCCceEEeCCCCCh--hhhhhhhhcccC-CeEEcCC-CCccccCCCCcccccceeeeccCCCcccC
Q 011738 87 RPQEKPLVLWLNGGPGC--SSVGYGATQEIG-PFLVDTD-GRGLQFNPYAWNKEANMLFLESPIGVGFS 151 (478)
Q Consensus 87 ~~~~~P~~lwl~GGPG~--ss~~~g~~~E~G-P~~~~~~-~~~~~~n~~sw~~~~~~l~iD~PvG~GfS 151 (478)
.|.+...-+-+-|.||+ ||+ +-.+.... .-..... +.+...+.+.++ -++.++|.| |.|.+
T Consensus 13 ~~~~~~~~i~ivG~~~~GKStl-in~l~~~~~~~~~~~~~~~t~~~~~~~~~--~~~~liDtp-G~~~~ 77 (179)
T TIGR03598 13 LPPDDGPEIAFAGRSNVGKSSL-INALTNRKKLARTSKTPGRTQLINFFEVN--DGFRLVDLP-GYGYA 77 (179)
T ss_pred CCCCCCCEEEEEcCCCCCHHHH-HHHHhCCCCcccccCCCCcceEEEEEEeC--CcEEEEeCC-CCccc
Confidence 35566777888888888 788 67766532 1111111 111111222222 278999999 87766
No 217
>PLN03082 Iron-sulfur cluster assembly; Provisional
Probab=35.40 E-value=36 Score=30.56 Aligned_cols=63 Identities=25% Similarity=0.363 Sum_probs=41.0
Q ss_pred CCCCceEEeCCCCChhhhhhhhhcccCC----eEEcCCCCccccCCCC--cccccceeeeccCCCcccCC
Q 011738 89 QEKPLVLWLNGGPGCSSVGYGATQEIGP----FLVDTDGRGLQFNPYA--WNKEANMLFLESPIGVGFSY 152 (478)
Q Consensus 89 ~~~P~~lwl~GGPG~ss~~~g~~~E~GP----~~~~~~~~~~~~n~~s--w~~~~~~l~iD~PvG~GfSy 152 (478)
+..++=|-+.|| |||++.|++=.+.-| ..+..+|-++.-.+.+ +-+-+.|=|+|...|.||-.
T Consensus 76 ~~~~LRl~V~~g-GCSG~~Y~~~ld~~~~~~D~v~e~~Gv~vvVD~~s~~~L~Gs~IDYve~l~~~gF~f 144 (163)
T PLN03082 76 EDKMLRLSVETG-GCSGFQYVFELDDKTNSDDRVFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVV 144 (163)
T ss_pred CCceEEEEEecC-CCCCceeeeEEccCCCCCCEEEecCCeEEEECHHHHHHhCCCEEEeecCCCCCeeEE
Confidence 346788999999 999976554433222 3444444344334433 55667788888888888877
No 218
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=35.34 E-value=45 Score=32.45 Aligned_cols=37 Identities=14% Similarity=0.160 Sum_probs=26.8
Q ss_pred CcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCC
Q 011738 188 RTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPE 231 (478)
Q Consensus 188 ~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~ 231 (478)
.++-++|||-||+-+=++|..+. ..+++..++-.+|+
T Consensus 120 ~klal~GHSrGGktAFAlALg~a-------~~lkfsaLIGiDPV 156 (307)
T PF07224_consen 120 SKLALSGHSRGGKTAFALALGYA-------TSLKFSALIGIDPV 156 (307)
T ss_pred ceEEEeecCCccHHHHHHHhccc-------ccCchhheeccccc
Confidence 47999999999999888887653 23446666655554
No 219
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=35.06 E-value=23 Score=23.22 Aligned_cols=12 Identities=33% Similarity=0.935 Sum_probs=6.3
Q ss_pred CceEEeCCCCCh
Q 011738 92 PLVLWLNGGPGC 103 (478)
Q Consensus 92 P~~lwl~GGPG~ 103 (478)
--.||++|-||-
T Consensus 25 gRTiWFqGdPGp 36 (39)
T PF09292_consen 25 GRTIWFQGDPGP 36 (39)
T ss_dssp S-EEEESS---T
T ss_pred CCEEEeeCCCCC
Confidence 457999999983
No 220
>COG3596 Predicted GTPase [General function prediction only]
Probab=34.89 E-value=44 Score=32.65 Aligned_cols=59 Identities=22% Similarity=0.326 Sum_probs=37.1
Q ss_pred CCCCceEEeCCCCCh--hhhhhhhhc--ccCCeEEcCCCCccccCCCCcccc--cceeeeccCCCcccC
Q 011738 89 QEKPLVLWLNGGPGC--SSVGYGATQ--EIGPFLVDTDGRGLQFNPYAWNKE--ANMLFLESPIGVGFS 151 (478)
Q Consensus 89 ~~~P~~lwl~GGPG~--ss~~~g~~~--E~GP~~~~~~~~~~~~n~~sw~~~--~~~l~iD~PvG~GfS 151 (478)
...|+.+.+-|--|| ||+ +-+++ |.=|.....-+ ...-.+.|... -||..+|.| |.|-+
T Consensus 36 ~~~pvnvLi~G~TG~GKSSl-iNALF~~~~~~v~~vg~~--t~~~~~~~~~~~~~~l~lwDtP-G~gdg 100 (296)
T COG3596 36 EKEPVNVLLMGATGAGKSSL-INALFQGEVKEVSKVGVG--TDITTRLRLSYDGENLVLWDTP-GLGDG 100 (296)
T ss_pred ccCceeEEEecCCCCcHHHH-HHHHHhccCceeeecccC--CCchhhHHhhccccceEEecCC-Ccccc
Confidence 457999999997777 998 66655 22233322211 22223344433 699999999 99976
No 221
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=34.83 E-value=41 Score=33.55 Aligned_cols=68 Identities=19% Similarity=0.287 Sum_probs=41.7
Q ss_pred ccceeeeccCCCcc-cCCcc----------CCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHH
Q 011738 136 EANMLFLESPIGVG-FSYSN----------TTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPE 204 (478)
Q Consensus 136 ~~~~l~iD~PvG~G-fSy~~----------~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~ 204 (478)
..-++|-|+=|||| |--.. ....+.. +..+-.+.-|.||-..|+ | +-.+|++|.|=|..-+-.
T Consensus 65 ~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~-gL~~nI~~AYrFL~~~ye--p---GD~Iy~FGFSRGAf~aRV 138 (423)
T COG3673 65 VTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQ-GLVQNIREAYRFLIFNYE--P---GDEIYAFGFSRGAFSARV 138 (423)
T ss_pred ceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHH-HHHHHHHHHHHHHHHhcC--C---CCeEEEeeccchhHHHHH
Confidence 34689999888887 11000 0011221 445555666777765443 3 567999999999776666
Q ss_pred HHHHH
Q 011738 205 LTELI 209 (478)
Q Consensus 205 la~~i 209 (478)
+|.-|
T Consensus 139 lagmi 143 (423)
T COG3673 139 LAGMI 143 (423)
T ss_pred HHHHH
Confidence 66554
No 222
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=34.75 E-value=27 Score=23.83 Aligned_cols=33 Identities=12% Similarity=0.093 Sum_probs=24.7
Q ss_pred CCCCCchhhhhhhHHHhhhcccCCHHHHHHHHh
Q 011738 229 NPETSTAEDWQGLVDYAWSHAVVSDETHKIILR 261 (478)
Q Consensus 229 ng~~dp~~~~~~~~~~a~~~gli~~~~~~~~~~ 261 (478)
.|.+||..-..--.+-|...|+||++....+.+
T Consensus 11 gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 11 GGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 477888776655667799999999988877754
No 223
>PRK15492 triosephosphate isomerase; Provisional
Probab=34.45 E-value=1.1e+02 Score=29.70 Aligned_cols=59 Identities=12% Similarity=0.249 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHH-hCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCch
Q 011738 166 FTANDSYTFLHKWFL-KFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (478)
Q Consensus 166 ~~a~~~~~~l~~F~~-~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~ 235 (478)
+.+++..+++++++. .+-+- ...+-|. |||---|.-+..|..+.+ +.|++||...+++.
T Consensus 189 e~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~~~d-------iDG~LvG~aSl~~~ 248 (260)
T PRK15492 189 DYADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFGQPH-------IDGLFIGRSAWDAD 248 (260)
T ss_pred HHHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhcCCC-------CCEEEeehhhcCHH
Confidence 456778888888864 34322 2234444 999999999999988644 99999999998884
No 224
>TIGR00419 tim triosephosphate isomerase. Triosephosphate isomerase (tim/TPIA) is the glycolytic enzyme that catalyzes the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. The active site of the enzyme is located between residues 240-258 of the model ([AV]-Y-E-P-[LIVM]-W-[SA]-I-G-T-[GK]) with E being the active site residue. There is a slight deviation from this sequence within the archeal members of this family.
Probab=32.77 E-value=88 Score=29.19 Aligned_cols=70 Identities=11% Similarity=0.125 Sum_probs=46.1
Q ss_pred eeeeccC--CCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCC
Q 011738 139 MLFLESP--IGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDP 216 (478)
Q Consensus 139 ~l~iD~P--vG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~ 216 (478)
+|-.+++ +|||.+- +.+.++++..+++ +-+ +... .+-|. |||---|.=+..+..+..
T Consensus 133 vIAYEPvWAIGtG~~a-----------s~~~~~~v~~~ir-~~~---~~~~-~~~Il---YGGSV~~~N~~~l~~~~~-- 191 (205)
T TIGR00419 133 VVAVEPPELIGTGIPV-----------SPAQPEVVHGSVR-AVK---EVNE-SVRVL---CGAGISTGEDAELAAQLG-- 191 (205)
T ss_pred EEEECCHHHhCCCCCC-----------CHHHHHHHHHHHH-hhh---hhcC-CceEE---EeCCCCHHHHHHHhcCCC--
Confidence 4555643 5777551 2345677777777 221 2212 23233 999999999999987644
Q ss_pred CceeeeeeeEecCCCCCc
Q 011738 217 SLYIDLKGILLGNPETST 234 (478)
Q Consensus 217 ~~~inLkGi~IGng~~dp 234 (478)
+.|++||.+.+++
T Consensus 192 -----iDG~LvG~Asl~a 204 (205)
T TIGR00419 192 -----AEGVLLASGSLKA 204 (205)
T ss_pred -----CCEEEEeeeeecC
Confidence 9999999998865
No 225
>PRK11190 Fe/S biogenesis protein NfuA; Provisional
Probab=32.64 E-value=82 Score=29.08 Aligned_cols=63 Identities=11% Similarity=0.257 Sum_probs=38.2
Q ss_pred ceEEeCCCCChhhhhhhhhc----cc--CCeEEcCCCCccccCCCC--cccccceeeeccCCCcccCCccCC
Q 011738 93 LVLWLNGGPGCSSVGYGATQ----EI--GPFLVDTDGRGLQFNPYA--WNKEANMLFLESPIGVGFSYSNTT 156 (478)
Q Consensus 93 ~~lwl~GGPG~ss~~~g~~~----E~--GP~~~~~~~~~~~~n~~s--w~~~~~~l~iD~PvG~GfSy~~~~ 156 (478)
+=|.+.|| |||++.+++=. |. +-..+..++-++.-.+.| +-+-+-|=|++...|.||.+.+++
T Consensus 25 LRI~V~~g-GCsG~~Y~~~~~~~~~~~~~D~v~e~~gv~v~Vd~~S~~~L~G~~IDyve~~~g~gF~f~NPN 95 (192)
T PRK11190 25 IRVFVINP-GTPNAECGVSYCPPDAVEATDTELKFDGFSAYVDELSAPFLEDAEIDFVTDQLGSQLTLKAPN 95 (192)
T ss_pred EEEEEECC-CcCCceeeeEEeecCCCCCCCEEEEeCCEEEEECcchHhHhCCCEEEEeecCCCCceEEECCC
Confidence 44555565 89875444333 11 223344444344444444 667788899999999999986654
No 226
>PF00121 TIM: Triosephosphate isomerase; InterPro: IPR000652 Triosephosphate isomerase (5.3.1.1 from EC) (TIM) [] is the glycolytic enzyme that catalyses the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. TIM plays an important role in several metabolic pathways and is essential for efficient energy production. It is present in eukaryotes as well as in prokaryotes. TIM is a dimer of identical subunits, each of which is made up of about 250 amino-acid residues. A glutamic acid residue is involved in the catalytic mechanism [, ]. The tertiary structure of TIM has eight beta/alpha motifs folded into a barrel structure. The TIM barrel fold occurs ubiquitously and is found in numerous other enzymes that can be involved in energy metabolism, macromolecule metabolism, or small molecule metabolism []. The sequence around the active site residue is perfectly conserved in all known TIM's. Deficiencies in TIM are associated with haemolytic anaemia coupled with a progressive, severe neurological disorder [].; GO: 0004807 triose-phosphate isomerase activity, 0008152 metabolic process; PDB: 2YPI_A 1YPI_A 1NEY_B 1NF0_B 1I45_A 7TIM_A 3YPI_B 2H6R_H 2Y63_A 1N55_A ....
Probab=32.48 E-value=20 Score=34.44 Aligned_cols=61 Identities=16% Similarity=0.298 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHH-hCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCCCch
Q 011738 165 DFTANDSYTFLHKWFL-KFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (478)
Q Consensus 165 ~~~a~~~~~~l~~F~~-~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~dp~ 235 (478)
.+.++.+..++++++. .|.+-..+.+-|. |||---|.=+..+..+. ++.|++||.+.+++.
T Consensus 177 ~~~~~~~~~~Ir~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~~-------~iDG~LVG~asl~~~ 238 (244)
T PF00121_consen 177 PEQIQEVHAFIREILAELYGEEVANNIRIL---YGGSVNPENAAELLSQP-------DIDGVLVGGASLKAE 238 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHSEEE---EESSESTTTHHHHHTST-------T-SEEEESGGGGSTH
T ss_pred HHHHHHHHHHHHHHHHHhccccccCceeEE---ECCcCCcccHHHHhcCC-------CCCEEEEchhhhccc
Confidence 3557788888888764 2311112233333 88888888888887753 499999999999885
No 227
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=31.44 E-value=4.7e+02 Score=27.16 Aligned_cols=28 Identities=21% Similarity=0.096 Sum_probs=25.0
Q ss_pred CCeEEEEecCCCcccChhhHHHHHHHcC
Q 011738 387 GLRIWIYSGDTDGRVPVLSTRYCLNSLG 414 (478)
Q Consensus 387 ~irVLiY~Gd~D~i~n~~G~~~~i~~L~ 414 (478)
..+|.+|.|+.|.++.....+..+..+.
T Consensus 332 ~~P~~l~~g~~D~l~~~~DV~~~~~~~~ 359 (403)
T KOG2624|consen 332 KVPTALYYGDNDWLADPEDVLILLLVLP 359 (403)
T ss_pred ccCEEEEecCCcccCCHHHHHHHHHhcc
Confidence 6999999999999999999988777664
No 228
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=31.25 E-value=44 Score=31.54 Aligned_cols=27 Identities=15% Similarity=0.226 Sum_probs=23.3
Q ss_pred CCeEEEEecCCCcccChhhHHHHHHHc
Q 011738 387 GLRIWIYSGDTDGRVPVLSTRYCLNSL 413 (478)
Q Consensus 387 ~irVLiY~Gd~D~i~n~~G~~~~i~~L 413 (478)
+++++|++|+.|..|+....++.+++.
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~ 195 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQW 195 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHH
Confidence 578999999999999999888877663
No 229
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=29.99 E-value=2.3e+02 Score=28.80 Aligned_cols=44 Identities=20% Similarity=0.254 Sum_probs=31.9
Q ss_pred CCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCC
Q 011738 186 RRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (478)
Q Consensus 186 ~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 232 (478)
-.||+.|+|+|.|++-|-.-..++.++.. ..+-=.=+++|.|..
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~---~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKA---FGLVENVVLMGAPVP 261 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccc---cCeEeeEEEecCCCC
Confidence 57899999999999999999999888733 233223455665543
No 230
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=28.96 E-value=73 Score=32.11 Aligned_cols=45 Identities=9% Similarity=0.133 Sum_probs=35.0
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHH
Q 011738 163 GDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIH 210 (478)
Q Consensus 163 ~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~ 210 (478)
+....++++...+.+.+.... .+++.|.|||.||.-+..++..+-
T Consensus 105 ~~~~~~~ql~~~V~~~l~~~g---a~~v~LigHS~GG~~~ry~~~~~~ 149 (336)
T COG1075 105 SLAVRGEQLFAYVDEVLAKTG---AKKVNLIGHSMGGLDSRYYLGVLG 149 (336)
T ss_pred cccccHHHHHHHHHHHHhhcC---CCceEEEeecccchhhHHHHhhcC
Confidence 455667888888887776443 689999999999999997776654
No 231
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=28.34 E-value=52 Score=30.42 Aligned_cols=56 Identities=21% Similarity=0.201 Sum_probs=37.5
Q ss_pred CCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCcccccCCChHHHHHHHHH
Q 011738 387 GLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHAVPVFKPSDSLALFSS 466 (478)
Q Consensus 387 ~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHmvP~dqP~~a~~mi~~ 466 (478)
-.+++|.+|+.|-++... ..++|... ..++.+++.+|.|+-.-.-.+ ..+.+..
T Consensus 149 P~~~lvi~g~~Ddvv~l~------~~l~~~~~-------------------~~~~~i~i~~a~HFF~gKl~~-l~~~i~~ 202 (210)
T COG2945 149 PSPGLVIQGDADDVVDLV------AVLKWQES-------------------IKITVITIPGADHFFHGKLIE-LRDTIAD 202 (210)
T ss_pred CCCceeEecChhhhhcHH------HHHHhhcC-------------------CCCceEEecCCCceecccHHH-HHHHHHH
Confidence 478999999999555544 44444222 257889999999997765443 3444455
Q ss_pred HH
Q 011738 467 FL 468 (478)
Q Consensus 467 fl 468 (478)
|+
T Consensus 203 ~l 204 (210)
T COG2945 203 FL 204 (210)
T ss_pred Hh
Confidence 55
No 232
>PRK10081 entericidin B membrane lipoprotein; Provisional
Probab=28.23 E-value=59 Score=22.74 Aligned_cols=21 Identities=24% Similarity=0.263 Sum_probs=12.2
Q ss_pred hhHHHHHHHHH-HHhhhhhhcc
Q 011738 6 EMKVTICLTFC-LLNALDVVSA 26 (478)
Q Consensus 6 ~~~~~~~~~~~-~~~~~~~~~~ 26 (478)
||+|++.++++ ++.++.++.|
T Consensus 1 MmKk~i~~i~~~l~~~~~l~~C 22 (48)
T PRK10081 1 MVKKTIAAIFSVLVLSTVLTAC 22 (48)
T ss_pred ChHHHHHHHHHHHHHHHHHhhh
Confidence 47777766554 4445555555
No 233
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=27.68 E-value=2.2e+02 Score=26.12 Aligned_cols=62 Identities=18% Similarity=0.262 Sum_probs=36.9
Q ss_pred HcCCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCcccc--c---CCChHH
Q 011738 385 EAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHAV--P---VFKPSD 459 (478)
Q Consensus 385 ~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHmv--P---~dqP~~ 459 (478)
+...+||+..|..|..++....+...+.|+=.+ ..+++.+..|++|== + .+++++
T Consensus 143 ~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~--------------------~~~~~~~y~ga~HgF~~~~~~~~~~~a 202 (218)
T PF01738_consen 143 KIKAPVLILFGENDPFFPPEEVEALEEALKAAG--------------------VDVEVHVYPGAGHGFANPSRPPYDPAA 202 (218)
T ss_dssp G--S-EEEEEETT-TTS-HHHHHHHHHHHHCTT--------------------TTEEEEEETT--TTTTSTTSTT--HHH
T ss_pred ccCCCEeecCccCCCCCChHHHHHHHHHHHhcC--------------------CcEEEEECCCCcccccCCCCcccCHHH
Confidence 346899999999999999998888888874111 246778888899952 2 234555
Q ss_pred HHHHHHH
Q 011738 460 SLALFSS 466 (478)
Q Consensus 460 a~~mi~~ 466 (478)
+.+..++
T Consensus 203 a~~a~~~ 209 (218)
T PF01738_consen 203 AEDAWQR 209 (218)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5544444
No 234
>COG0149 TpiA Triosephosphate isomerase [Carbohydrate transport and metabolism]
Probab=27.59 E-value=2.7e+02 Score=26.90 Aligned_cols=76 Identities=21% Similarity=0.332 Sum_probs=53.6
Q ss_pred ceeeeccC--CCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHh-CCCCCCCcEEEEeccCCccchHHHHHHHHHhcC
Q 011738 138 NMLFLESP--IGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLK-FPSYRRRTFYIAGESYAGRYIPELTELIHDRNK 214 (478)
Q Consensus 138 ~~l~iD~P--vG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~-fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~ 214 (478)
.+|-.++| +|||-|- +.+.++.+..|++..... |.+= ..+-|- |||-.=|.=+.++..+.
T Consensus 161 ~vIAYEPvWAIGTG~~a-----------t~~~a~~v~~~Ir~~~~~~~~~~--~~v~Il---YGGSV~~~N~~e~~~~~- 223 (251)
T COG0149 161 IVIAYEPVWAIGTGKSA-----------SPADAEEVHAFIRAVLAELFGAE--EKVRIL---YGGSVKPGNAAELAAQP- 223 (251)
T ss_pred eEEEECCHHHhcCCCCC-----------CHHHHHHHHHHHHHHHHHhcCCC--CCeEEE---EeCCcChhHHHHHhcCC-
Confidence 45666643 6888772 334578888888888753 4322 334443 88888899888887763
Q ss_pred CCCceeeeeeeEecCCCCCchh
Q 011738 215 DPSLYIDLKGILLGNPETSTAE 236 (478)
Q Consensus 215 ~~~~~inLkGi~IGng~~dp~~ 236 (478)
++.|++||.+.+++..
T Consensus 224 ------~idG~LVGgAslka~~ 239 (251)
T COG0149 224 ------DIDGALVGGASLKADD 239 (251)
T ss_pred ------CCCeEEEcceeecchh
Confidence 4999999999998853
No 235
>cd01876 YihA_EngB The YihA (EngB) subfamily. This subfamily of GTPases is typified by the E. coli YihA, an essential protein involved in cell division control. YihA and its orthologs are small proteins that typically contain less than 200 amino acid residues and consists of the GTPase domain only (some of the eukaryotic homologs contain an N-terminal extension of about 120 residues that might be involved in organellar targeting). Homologs of yihA are found in most Gram-positive and Gram-negative pathogenic bacteria, with the exception of Mycobacterium tuberculosis. The broad-spectrum nature of YihA and its essentiality for cell viability in bacteria make it an attractive antibacterial target.
Probab=27.54 E-value=1.5e+02 Score=25.11 Aligned_cols=52 Identities=17% Similarity=0.258 Sum_probs=28.7
Q ss_pred EeCCCCCh--hhhhhhhhcccCCeEEcCCCC--ccccCCCCcccccceeeeccCCCcccC
Q 011738 96 WLNGGPGC--SSVGYGATQEIGPFLVDTDGR--GLQFNPYAWNKEANMLFLESPIGVGFS 151 (478)
Q Consensus 96 wl~GGPG~--ss~~~g~~~E~GP~~~~~~~~--~~~~n~~sw~~~~~~l~iD~PvG~GfS 151 (478)
-+-|.+|+ |++ +..+.+++......... +.....+.+. .++.++|-| |.|++
T Consensus 3 ~l~G~~g~GKTtL-~~~l~~~~~~~~~~~~~~~t~~~~~~~~~--~~~~~~D~~-g~~~~ 58 (170)
T cd01876 3 AFAGRSNVGKSSL-INALTNRKKLARTSKTPGKTQLINFFNVN--DKFRLVDLP-GYGYA 58 (170)
T ss_pred EEEcCCCCCHHHH-HHHHhcCCceeeecCCCCcceeEEEEEcc--CeEEEecCC-Ccccc
Confidence 35566666 888 78777555543322211 1111112222 288999999 87766
No 236
>PLN02606 palmitoyl-protein thioesterase
Probab=26.70 E-value=1.9e+02 Score=28.80 Aligned_cols=89 Identities=17% Similarity=0.187 Sum_probs=0.0
Q ss_pred CCCCCceEEeCCCCC--hhhhhhhhhcccCCeEEcCCCCccccCCCCc-ccccceeeeccCCCcccCCccCCCCCcccCh
Q 011738 88 PQEKPLVLWLNGGPG--CSSVGYGATQEIGPFLVDTDGRGLQFNPYAW-NKEANMLFLESPIGVGFSYSNTTNDYEMLGD 164 (478)
Q Consensus 88 ~~~~P~~lwl~GGPG--~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw-~~~~~~l~iD~PvG~GfSy~~~~~~~~~~~~ 164 (478)
....|+||| .|=| |++-+++.+. .+..+ + ......|+|+. +..+.+-. +.
T Consensus 24 ~~~~PvViw--HGlgD~~~~~~~~~~~------------~~i~~---~~~~pg~~v~ig~---------~~~~s~~~-~~ 76 (306)
T PLN02606 24 SLSVPFVLF--HGFGGECSNGKVSNLT------------QFLIN---HSGYPGTCVEIGN---------GVQDSLFM-PL 76 (306)
T ss_pred CCCCCEEEE--CCCCcccCCchHHHHH------------HHHHh---CCCCCeEEEEECC---------Cccccccc-CH
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHH
Q 011738 165 DFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTEL 208 (478)
Q Consensus 165 ~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~ 208 (478)
.++.+.+.+.|+ ..|++ .+-+.+.|.|=||...-+++.+
T Consensus 77 ~~Qv~~vce~l~----~~~~L-~~G~naIGfSQGglflRa~ier 115 (306)
T PLN02606 77 RQQASIACEKIK----QMKEL-SEGYNIVAESQGNLVARGLIEF 115 (306)
T ss_pred HHHHHHHHHHHh----cchhh-cCceEEEEEcchhHHHHHHHHH
No 237
>KOG1643 consensus Triosephosphate isomerase [Carbohydrate transport and metabolism]
Probab=26.62 E-value=98 Score=28.77 Aligned_cols=85 Identities=19% Similarity=0.262 Sum_probs=52.0
Q ss_pred ccCCCCcccccceeeec--cCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHh--CCCCCCCcEEEEeccCCccch
Q 011738 127 QFNPYAWNKEANMLFLE--SPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLK--FPSYRRRTFYIAGESYAGRYI 202 (478)
Q Consensus 127 ~~n~~sw~~~~~~l~iD--~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~--fp~~~~~~~~i~GeSYgG~yv 202 (478)
..+--+|.+. +|--+ ..+|||.- -+.++|+++++.|+.|... -+.-+..-=+|.|-|--
T Consensus 150 ad~v~~w~ni--viAYEPVWAIGTGk~-----------atp~QaqEVh~~iR~wl~~~vs~~Va~~~RIiYGGSV~---- 212 (247)
T KOG1643|consen 150 ADKVKDWSNI--VIAYEPVWAIGTGKT-----------ATPEQAQEVHAEIRKWLKSNVSDAVASSTRIIYGGSVN---- 212 (247)
T ss_pred HHhcCCccce--EEEeeceeeecCCCC-----------CCHHHHHHHHHHHHHHHhhcchhhhhhceEEEeccccc----
Confidence 3455667654 23333 13588754 2346799999999999975 23333333455444443
Q ss_pred HHHHHHHHHhcCCCCceeeeeeeEecCCCCCch
Q 011738 203 PELTELIHDRNKDPSLYIDLKGILLGNPETSTA 235 (478)
Q Consensus 203 p~la~~i~~~n~~~~~~inLkGi~IGng~~dp~ 235 (478)
-.-+..+.++. .+.|+++|..-+-|.
T Consensus 213 g~N~~el~~~~-------diDGFLVGGaSLKpe 238 (247)
T KOG1643|consen 213 GGNCKELAKKP-------DIDGFLVGGASLKPE 238 (247)
T ss_pred cccHHHhcccc-------cccceEEcCcccChH
Confidence 34455555543 399999999988875
No 238
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=26.51 E-value=1.9e+02 Score=28.36 Aligned_cols=66 Identities=15% Similarity=0.059 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHhCCC--C-CCCcEEEEeccCCccchHHHHHHHHHhcCCCCceee--eeeeEecCCCCCch
Q 011738 166 FTANDSYTFLHKWFLKFPS--Y-RRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYID--LKGILLGNPETSTA 235 (478)
Q Consensus 166 ~~a~~~~~~l~~F~~~fp~--~-~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~in--LkGi~IGng~~dp~ 235 (478)
..|..+++.++.-.+..+. + .+.++.|+|.|=||+=. ..|.++...= .+.++ |.|.+.|.+..|..
T Consensus 46 ~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa-~~AA~l~~~Y---ApeL~~~l~Gaa~gg~~~dl~ 116 (290)
T PF03583_consen 46 SEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAA-LWAAELAPSY---APELNRDLVGAAAGGPPADLA 116 (290)
T ss_pred hHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHH-HHHHHHhHHh---CcccccceeEEeccCCccCHH
Confidence 4455555555554433332 2 35789999999998744 3444443321 35677 99999999887754
No 239
>TIGR01911 HesB_rel_seleno HesB-like selenoprotein. This model represents a family of small proteins related to HesB and its close homologs, which are likely to be invovlved in iron-sulfur cluster assembly (See TIGR00049 and pfam01521). Several members are selenoproteins, with a TGA codon and Sec residue that aligns to the conserved Cys of the HesB domain. A variable Cys/Ser/Gly-rich C-terminal region is not included in the seed alignment and model.
Probab=26.38 E-value=55 Score=26.25 Aligned_cols=17 Identities=18% Similarity=0.466 Sum_probs=13.5
Q ss_pred ceEEeCCCCChhhhhhhh
Q 011738 93 LVLWLNGGPGCSSVGYGA 110 (478)
Q Consensus 93 ~~lwl~GGPG~ss~~~g~ 110 (478)
+=|.+.|| |||++.|++
T Consensus 28 LRi~v~~g-GCsG~~Y~~ 44 (92)
T TIGR01911 28 IRIHFAGM-GCMGPMFNL 44 (92)
T ss_pred EEEEEeCC-CccCcccce
Confidence 77889998 999986443
No 240
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=25.98 E-value=35 Score=33.40 Aligned_cols=34 Identities=18% Similarity=0.148 Sum_probs=21.0
Q ss_pred HHHHHHHHhCCCCCCCcEEEEeccCCccchHHHH
Q 011738 173 TFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELT 206 (478)
Q Consensus 173 ~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la 206 (478)
+.|..|...-..|-...+.++|||-||..+.-+.
T Consensus 261 a~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG 294 (425)
T KOG4540|consen 261 AALDILGAVRRIYPDARIWLTGHSLGGAIASLLG 294 (425)
T ss_pred HHHHHHHHHHHhCCCceEEEeccccchHHHHHhc
Confidence 3444444332333367899999999996554443
No 241
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=25.98 E-value=35 Score=33.40 Aligned_cols=34 Identities=18% Similarity=0.148 Sum_probs=21.0
Q ss_pred HHHHHHHHhCCCCCCCcEEEEeccCCccchHHHH
Q 011738 173 TFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELT 206 (478)
Q Consensus 173 ~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la 206 (478)
+.|..|...-..|-...+.++|||-||..+.-+.
T Consensus 261 a~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG 294 (425)
T COG5153 261 AALDILGAVRRIYPDARIWLTGHSLGGAIASLLG 294 (425)
T ss_pred HHHHHHHHHHHhCCCceEEEeccccchHHHHHhc
Confidence 3444444332333367899999999996554443
No 242
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=25.69 E-value=1.3e+02 Score=31.96 Aligned_cols=114 Identities=15% Similarity=0.267 Sum_probs=67.5
Q ss_pred eEEEEEEEecCCCCCCCceEEeCCCCChhhhhhhhhcc--cC-CeEEcCCCCccccCCCCcccccceeeeccCCCcccCC
Q 011738 76 ALFYWFYEAMTRPQEKPLVLWLNGGPGCSSVGYGATQE--IG-PFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSY 152 (478)
Q Consensus 76 ~lfy~f~es~~~~~~~P~~lwl~GGPG~ss~~~g~~~E--~G-P~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~GfSy 152 (478)
.++|.|-+ ..-..||.+.+.|==.+-+.. |.++- +| || ||+=|+.+--| ++
T Consensus 277 Ei~yYFnP---GD~KPPL~VYFSGyR~aEGFE-gy~MMk~Lg~Pf---------------------LL~~DpRleGG-aF 330 (511)
T TIGR03712 277 EFIYYFNP---GDFKPPLNVYFSGYRPAEGFE-GYFMMKRLGAPF---------------------LLIGDPRLEGG-AF 330 (511)
T ss_pred eeEEecCC---cCCCCCeEEeeccCcccCcch-hHHHHHhcCCCe---------------------EEeeccccccc-ee
Confidence 36666533 233569999999976665553 44442 22 44 45556454444 43
Q ss_pred ccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCCCC
Q 011738 153 SNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNPET 232 (478)
Q Consensus 153 ~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng~~ 232 (478)
-..+ ++--+.+.+.+++-++.- .|..++++|.|=|+|-.=+.+.++ .++-..|+||=|.+
T Consensus 331 YlGs--------~eyE~~I~~~I~~~L~~L-gF~~~qLILSGlSMGTfgAlYYga-----------~l~P~AIiVgKPL~ 390 (511)
T TIGR03712 331 YLGS--------DEYEQGIINVIQEKLDYL-GFDHDQLILSGLSMGTFGALYYGA-----------KLSPHAIIVGKPLV 390 (511)
T ss_pred eeCc--------HHHHHHHHHHHHHHHHHh-CCCHHHeeeccccccchhhhhhcc-----------cCCCceEEEcCccc
Confidence 2222 222333445555544322 566889999999999765555553 45677899998887
Q ss_pred Cch
Q 011738 233 STA 235 (478)
Q Consensus 233 dp~ 235 (478)
+--
T Consensus 391 NLG 393 (511)
T TIGR03712 391 NLG 393 (511)
T ss_pred chh
Confidence 753
No 243
>PF15613 WHIM2: WSTF, HB1, Itc1p, MBD9 motif 2
Probab=25.63 E-value=1.2e+02 Score=20.03 Aligned_cols=27 Identities=19% Similarity=0.431 Sum_probs=13.1
Q ss_pred eEEEEEEEecCCCCCCCceEEeCCCCC
Q 011738 76 ALFYWFYEAMTRPQEKPLVLWLNGGPG 102 (478)
Q Consensus 76 ~lfy~f~es~~~~~~~P~~lwl~GGPG 102 (478)
+-+|||-.+........--+|+.+||+
T Consensus 12 NrYwwf~~s~~~~~~~~~~~~v~~~~~ 38 (38)
T PF15613_consen 12 NRYWWFSSSSSNSQYYNGGRFVEQGPD 38 (38)
T ss_pred ceEEEEecccccCCCCCceEEEEeCCC
Confidence 455666333333334444555555564
No 244
>cd00412 pyrophosphatase Inorganic pyrophosphatase. These enzymes hydrolyze inorganic pyrophosphate (PPi) to two molecules of orthophosphates (Pi). The reaction requires bivalent cations. The enzymes in general exist as homooligomers.
Probab=25.52 E-value=2.4e+02 Score=25.05 Aligned_cols=46 Identities=11% Similarity=-0.006 Sum_probs=32.1
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHh
Q 011738 163 GDDFTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDR 212 (478)
Q Consensus 163 ~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~ 212 (478)
+.++....+.+-++.||+.+..+.+.+..-+ +|..-+.-|.+++++
T Consensus 107 ~l~Dl~~~~l~~I~~fF~~YK~le~~k~~~~----~g~~~~~~A~~~I~~ 152 (155)
T cd00412 107 DISDVPPHLLDEIKHFFEHYKDLEGKKEVKV----AGWKDKEEALKIIKE 152 (155)
T ss_pred ChHHCCHHHHHHHHHHHHHhcccCCCCceEE----CcCcCHHHHHHHHHH
Confidence 4455667888999999999888876443322 366677777777664
No 245
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=24.92 E-value=1.4e+02 Score=28.30 Aligned_cols=78 Identities=19% Similarity=0.226 Sum_probs=47.8
Q ss_pred HHHHHcCCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEc-CCcccccCCCh--
Q 011738 381 TKLIEAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVR-GAGHAVPVFKP-- 457 (478)
Q Consensus 381 ~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~-~AGHmvP~dqP-- 457 (478)
..+-+-+.+||+..|+.|-+||......|-+.++= +-.++-|++.|++-+.-.+. .+==--|.|++
T Consensus 158 ~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~-----------~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~ 226 (242)
T KOG3043|consen 158 ADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKE-----------NPAVGSQVKTFSGVGHGFVARRANISSPEDKKAA 226 (242)
T ss_pred hHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhc-----------CcccceeEEEcCCccchhhhhccCCCChhHHHHH
Confidence 33334468999999999999999999888888751 11233455555544333322 22222366654
Q ss_pred HHHHHHHHHHHc
Q 011738 458 SDSLALFSSFLL 469 (478)
Q Consensus 458 ~~a~~mi~~fl~ 469 (478)
+.+++.+..|++
T Consensus 227 eea~~~~~~Wf~ 238 (242)
T KOG3043|consen 227 EEAYQRFISWFK 238 (242)
T ss_pred HHHHHHHHHHHH
Confidence 456666666663
No 246
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=24.87 E-value=2e+02 Score=28.07 Aligned_cols=92 Identities=22% Similarity=0.290 Sum_probs=54.3
Q ss_pred CCCCCceEEeCCCCChhhhhhhhhcccCCeEEcCCCCccccCCCCcccccceeeeccCCCcc--cCCccCCCCCcccChH
Q 011738 88 PQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVG--FSYSNTTNDYEMLGDD 165 (478)
Q Consensus 88 ~~~~P~~lwl~GGPG~ss~~~g~~~E~GP~~~~~~~~~~~~n~~sw~~~~~~l~iD~PvG~G--fSy~~~~~~~~~~~~~ 165 (478)
++..|+|+|=-=|=.|||.+++.|.| +..| ++=. -+.-+|- |-| -|+- . ...
T Consensus 21 ~s~~P~ii~HGigd~c~~~~~~~~~q------------~l~~-~~g~---~v~~lei--g~g~~~s~l-------~-pl~ 74 (296)
T KOG2541|consen 21 PSPVPVIVWHGIGDSCSSLSMANLTQ------------LLEE-LPGS---PVYCLEI--GDGIKDSSL-------M-PLW 74 (296)
T ss_pred cccCCEEEEeccCcccccchHHHHHH------------HHHh-CCCC---eeEEEEe--cCCcchhhh-------c-cHH
Confidence 44489999988888999854567763 2222 1111 1222331 333 2211 1 344
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHH
Q 011738 166 FTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIH 210 (478)
Q Consensus 166 ~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~ 210 (478)
++++...+.+. ..|++ .+-++|.|.|=||-.+-+++...-
T Consensus 75 ~Qv~~~ce~v~----~m~~l-sqGynivg~SQGglv~Raliq~cd 114 (296)
T KOG2541|consen 75 EQVDVACEKVK----QMPEL-SQGYNIVGYSQGGLVARALIQFCD 114 (296)
T ss_pred HHHHHHHHHHh----cchhc-cCceEEEEEccccHHHHHHHHhCC
Confidence 55555555544 55666 568999999999988777776653
No 247
>PF04414 tRNA_deacylase: D-aminoacyl-tRNA deacylase; InterPro: IPR007508 D-aminoacyl-tRNA deacylases hydrolyse the ester bond between the polynucleotide and the D-amino acid, thereby preventing the accumulation of such mis-acylated and metabolically inactive tRNA molecules. Several aminoacyl-tRNA synthetases have the ability to transfer the D-isomer of their amino acid onto their cognate tRNA. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1YQE_A 2GFQ_B.
Probab=24.68 E-value=1.9e+02 Score=27.21 Aligned_cols=48 Identities=17% Similarity=0.100 Sum_probs=32.3
Q ss_pred cChHHHHHHHHHHHHHHHHhCCCCCC-CcEEEEeccCCccchHHHHHHHHHh
Q 011738 162 LGDDFTANDSYTFLHKWFLKFPSYRR-RTFYIAGESYAGRYIPELTELIHDR 212 (478)
Q Consensus 162 ~~~~~~a~~~~~~l~~F~~~fp~~~~-~~~~i~GeSYgG~yvp~la~~i~~~ 212 (478)
|+++.+++-+.+.+.+.+..-++-.. ..+.-+| ||||+|.+...+++.
T Consensus 104 W~d~~a~~~vA~avl~~~~~~~~~~~~~~~ig~G---G~HYapr~t~~~l~~ 152 (213)
T PF04414_consen 104 WNDPDAAEAVARAVLEVLESDEKAECCPVAIGFG---GGHYAPRFTKLALET 152 (213)
T ss_dssp HT-HHHHHHHHHHHHHHHHHTTCSTT-EEEEEE----S-TT-HHHHHHHHHC
T ss_pred hCChHHHHHHHHHHHHHhcccccccccceeEEec---CcccchhhhhhhhcC
Confidence 47888888888888888876553321 3455555 899999999988774
No 248
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=24.54 E-value=32 Score=18.74 Aligned_cols=16 Identities=38% Similarity=0.441 Sum_probs=8.3
Q ss_pred hhHHHHHHHHHHHhhh
Q 011738 6 EMKVTICLTFCLLNAL 21 (478)
Q Consensus 6 ~~~~~~~~~~~~~~~~ 21 (478)
||+..++|+.++++.+
T Consensus 1 MMk~vIIlvvLLliSf 16 (19)
T PF13956_consen 1 MMKLVIILVVLLLISF 16 (19)
T ss_pred CceehHHHHHHHhccc
Confidence 3555555555554443
No 249
>PRK06762 hypothetical protein; Provisional
Probab=24.52 E-value=39 Score=29.79 Aligned_cols=20 Identities=15% Similarity=0.381 Sum_probs=15.2
Q ss_pred CceEEeCCCCCh--hhhhhhhhc
Q 011738 92 PLVLWLNGGPGC--SSVGYGATQ 112 (478)
Q Consensus 92 P~~lwl~GGPG~--ss~~~g~~~ 112 (478)
|.+||+.|.||| |.+ -..|.
T Consensus 2 ~~li~i~G~~GsGKST~-A~~L~ 23 (166)
T PRK06762 2 TTLIIIRGNSGSGKTTI-AKQLQ 23 (166)
T ss_pred CeEEEEECCCCCCHHHH-HHHHH
Confidence 789999999998 565 34443
No 250
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=22.82 E-value=72 Score=29.38 Aligned_cols=28 Identities=14% Similarity=-0.017 Sum_probs=24.3
Q ss_pred CeEEEEecCCCcccChhhHHHHHHHcCC
Q 011738 388 LRIWIYSGDTDGRVPVLSTRYCLNSLGL 415 (478)
Q Consensus 388 irVLiY~Gd~D~i~n~~G~~~~i~~L~w 415 (478)
-+++|.+|..|.+||...++...+.|+-
T Consensus 169 p~~~i~hG~~D~vVp~~~~~~~~~~l~~ 196 (212)
T TIGR01840 169 PIMSVVHGDADYTVLPGNADEIRDAMLK 196 (212)
T ss_pred CeEEEEEcCCCceeCcchHHHHHHHHHH
Confidence 4578999999999999999998888753
No 251
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=22.03 E-value=1.6e+02 Score=32.11 Aligned_cols=51 Identities=14% Similarity=0.217 Sum_probs=41.2
Q ss_pred HHHHHcCCeEEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCCeEEEEEcCCcccccC
Q 011738 381 TKLIEAGLRIWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAGLTFVTVRGAGHAVPV 454 (478)
Q Consensus 381 ~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~ltf~~V~~AGHmvP~ 454 (478)
+.||+.+.+||+..|..|..|.-.-.|..-.+|.= --..++|.+|+|-.-.
T Consensus 298 E~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA-----------------------~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 298 EALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQA-----------------------EVELHVIGGADHSMAI 348 (784)
T ss_pred hhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhc-----------------------cceEEEecCCCccccC
Confidence 67888899999999999999998888888777651 2236888999997543
No 252
>cd01853 Toc34_like Toc34-like (Translocon at the Outer-envelope membrane of Chloroplasts). This family contains several Toc proteins, including Toc34, Toc33, Toc120, Toc159, Toc86, Toc125, and Toc90. The Toc complex at the outer envelope membrane of chloroplasts is a molecular machine of ~500 kDa that contains a single Toc159 protein, four Toc75 molecules, and four or five copies of Toc34. Toc64 and Toc12 are associated with the translocon, but do not appear to be part of the core complex. The Toc translocon initiates the import of nuclear-encoded preproteins from the cytosol into the organelle. Toc34 and Toc159 are both GTPases, while Toc75 is a beta-barrel integral membrane protein. Toc159 is equally distributed between a soluble cytoplasmic form and a membrane-inserted form, suggesting that assembly of the Toc complex is dynamic. Toc34 and Toc75 act sequentially to mediate docking and insertion of Toc159 resulting in assembly of the functional translocon.
Probab=22.00 E-value=3.8e+02 Score=25.66 Aligned_cols=61 Identities=13% Similarity=0.077 Sum_probs=35.9
Q ss_pred CCCCCceEEeCCCCCh--hhhhhhhhcccCCeEEcCC-CCc--cccCCCCcccccceeeeccCCCcccC
Q 011738 88 PQEKPLVLWLNGGPGC--SSVGYGATQEIGPFLVDTD-GRG--LQFNPYAWNKEANMLFLESPIGVGFS 151 (478)
Q Consensus 88 ~~~~P~~lwl~GGPG~--ss~~~g~~~E~GP~~~~~~-~~~--~~~n~~sw~~~~~~l~iD~PvG~GfS 151 (478)
....|+-|.|-|-+|+ ||+ +-.+..-.-..+..- ..+ ...-...|. ...+.+||.| |.+.+
T Consensus 27 ~~~~~~~IllvG~tGvGKSSl-iNaLlg~~~~~v~~~~~~T~~~~~~~~~~~-g~~i~vIDTP-Gl~~~ 92 (249)
T cd01853 27 ELDFSLTILVLGKTGVGKSST-INSIFGERKAATSAFQSETLRVREVSGTVD-GFKLNIIDTP-GLLES 92 (249)
T ss_pred hccCCeEEEEECCCCCcHHHH-HHHHhCCCCcccCCCCCceEEEEEEEEEEC-CeEEEEEECC-CcCcc
Confidence 4577999999999998 888 565554332222211 111 111122232 3568999999 87754
No 253
>PRK14731 coaE dephospho-CoA kinase; Provisional
Probab=21.98 E-value=72 Score=29.61 Aligned_cols=32 Identities=31% Similarity=0.485 Sum_probs=27.2
Q ss_pred CCCceEEeCCCCCh--hhhhhhhhcccCCeEEcCC
Q 011738 90 EKPLVLWLNGGPGC--SSVGYGATQEIGPFLVDTD 122 (478)
Q Consensus 90 ~~P~~lwl~GGPG~--ss~~~g~~~E~GP~~~~~~ 122 (478)
..|.+|=+.||+|| |.+ ...|.+.|-..++.|
T Consensus 3 ~~~~~igitG~igsGKSt~-~~~l~~~g~~v~d~D 36 (208)
T PRK14731 3 SLPFLVGVTGGIGSGKSTV-CRFLAEMGCELFEAD 36 (208)
T ss_pred CCCEEEEEECCCCCCHHHH-HHHHHHCCCeEEecc
Confidence 35789999999999 888 688888998888877
No 254
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=21.88 E-value=65 Score=27.61 Aligned_cols=16 Identities=44% Similarity=0.629 Sum_probs=14.1
Q ss_pred CCCCCceEEeCCCCCh
Q 011738 88 PQEKPLVLWLNGGPGC 103 (478)
Q Consensus 88 ~~~~P~~lwl~GGPG~ 103 (478)
..++||||-|+|.||+
T Consensus 49 ~p~KpLVlSfHG~tGt 64 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGT 64 (127)
T ss_pred CCCCCEEEEeecCCCC
Confidence 4577999999999997
No 255
>TIGR03341 YhgI_GntY IscR-regulated protein YhgI. IscR (TIGR02010) is an iron-sulfur cluster-binding transcriptional regulator (see Genome Property GenProp0138). Members of this protein family include YhgI, whose expression is under control of IscR, and show sequence similarity to IscA, a known protein of iron-sulfur cluster biosynthesis. These two lines of evidence strongly suggest a role as an iron-sulfur cluster biosynthesis protein. An older study designated this protein GntY and suggested a role for it and for the product of an adjacent gene, based on complementation studies, in gluconate utilization.
Probab=21.66 E-value=1.7e+02 Score=26.92 Aligned_cols=64 Identities=9% Similarity=0.170 Sum_probs=39.1
Q ss_pred CceEEeCCCCChhhhhhhhh----cccC--CeEEcCCCCcccc--CCCCcccccceeeeccCCCcccCCccCC
Q 011738 92 PLVLWLNGGPGCSSVGYGAT----QEIG--PFLVDTDGRGLQF--NPYAWNKEANMLFLESPIGVGFSYSNTT 156 (478)
Q Consensus 92 P~~lwl~GGPG~ss~~~g~~----~E~G--P~~~~~~~~~~~~--n~~sw~~~~~~l~iD~PvG~GfSy~~~~ 156 (478)
.+=|.+.|| |||++.+++= .|.. =..+..++-++.- ....+-+-+-|=|++...|.||.+.++.
T Consensus 23 ~LRv~V~~g-GCsG~~Y~l~~~~~~~~~~~D~v~e~~g~~v~Vd~~s~~~L~g~~IDyve~~~g~gF~f~NPn 94 (190)
T TIGR03341 23 GIRVFVVNP-GTPYAECCVSYCPPDEVEPSDIKLEFNGFSAYVDALSAPFLEDAVIDFVTDRMGGQLTLKAPN 94 (190)
T ss_pred eEEEEEECC-ccCCceeeeEEcccCCCCCCCEEEEeCCEEEEEccchhhHhCCCEEEEeecCCCceeEEeCCc
Confidence 355666665 8887644442 1221 1333334433333 3344778888999999999999986654
No 256
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=21.41 E-value=76 Score=29.29 Aligned_cols=54 Identities=11% Similarity=0.032 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcEEEEeccCCccchHHHHHHHHHhcCCCCceeeeeeeEecCC
Q 011738 166 FTANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELTELIHDRNKDPSLYIDLKGILLGNP 230 (478)
Q Consensus 166 ~~a~~~~~~l~~F~~~fp~~~~~~~~i~GeSYgG~yvp~la~~i~~~n~~~~~~inLkGi~IGng 230 (478)
...+++..+ .++++..|+....++.++|.|+||.++-.+|..- . .+++.+.-=|
T Consensus 77 ~~~~~~~aa-~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~---------~~~a~v~~yg 130 (218)
T PF01738_consen 77 QVAADLQAA-VDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-P---------RVDAAVSFYG 130 (218)
T ss_dssp HHHHHHHHH-HHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-T---------TSSEEEEES-
T ss_pred HHHHHHHHH-HHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-c---------ccceEEEEcC
Confidence 334444333 3455666655677899999999999887766432 1 1677776555
No 257
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=21.16 E-value=2.7e+02 Score=27.61 Aligned_cols=67 Identities=16% Similarity=0.094 Sum_probs=41.4
Q ss_pred EEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeee-EEEEEeC--CeEEEEEcCCcccccCCChH
Q 011738 392 IYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVG-GWVQEYA--GLTFVTVRGAGHAVPVFKPS 458 (478)
Q Consensus 392 iY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~-Gy~k~~~--~ltf~~V~~AGHmvP~dqP~ 458 (478)
|-.|+.|..+|......+.+.++-=...+-..+..+.... -|...-+ -+.+.+|.+.||-.|.-.+.
T Consensus 213 ~g~g~~~~~v~~~~~~~~Waa~ng~~~~p~~~~~~~~~~~~~~~~~~~~~~V~~y~i~g~GH~wp~~~~~ 282 (312)
T COG3509 213 IGRGQRDGVVSAADLAARWAAVNGCQAGPDTAELPDVGDGTDYDTCDGNARVELYTIDGGGHTWPGGTQY 282 (312)
T ss_pred cccccccccccHHHHHHHHHHhcCCCCCCcccccCCCcccceeeccCCCcceEEEEEeCCcccCcCCCCC
Confidence 7889999988888777777777643333333332221111 1222222 28899999999999975444
No 258
>PRK10115 protease 2; Provisional
Probab=20.42 E-value=1.4e+02 Score=33.36 Aligned_cols=55 Identities=16% Similarity=0.102 Sum_probs=38.4
Q ss_pred CCe-EEEEecCCCcccChhhHHHHHHHcCCCCCcccccceecCeeeEEEEEeCC-eEEEEEcCCcccccCCChHH
Q 011738 387 GLR-IWIYSGDTDGRVPVLSTRYCLNSLGLSITKSWRPWYHQKQVGGWVQEYAG-LTFVTVRGAGHAVPVFKPSD 459 (478)
Q Consensus 387 ~ir-VLiY~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~~Gy~k~~~~-ltf~~V~~AGHmvP~dqP~~ 459 (478)
.++ +||.+|..|..|++..++.|+.+|+=.+.. .+ +-+-+-.++||.-...+-+.
T Consensus 605 ~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~------------------~~~vl~~~~~~~GHg~~~~r~~~ 661 (686)
T PRK10115 605 AYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTD------------------DHLLLLCTDMDSGHGGKSGRFKS 661 (686)
T ss_pred CCCceeEEecCCCCCcCchHHHHHHHHHHhcCCC------------------CceEEEEecCCCCCCCCcCHHHH
Confidence 478 678899999999999999999998622211 12 22223379999966655444
No 259
>PF00809 Pterin_bind: Pterin binding enzyme This Prosite entry is a subset of the Pfam family; InterPro: IPR000489 The ~250-residue pterin-binding domain has been shown to adopt a (beta/alpha)8 barrel fold, which has the overall shape of a distorted cylinder. It has eight alpha-helices stacked around the outside of an inner cylinder of parallel beta-strands. The pterin ring binds at the bottom of the (beta/alpha;)8 barrel in a polar cup-like region that is relatively solvent exposed and fairly negatively charged. The pterin ring is partially buried within the (beta/alpha)8 barrel. The pterin binding residues are highly conserved and include aspartate and asparagine residues located at the C terminus of the beta-strands of the barrel, which are predicted to form hydrogen bonds with the nitrogen and oxygen atoms of the pterin ring [, , ]. Some proteins known to contain a pterin-binding domain are listed below: Prokaryotic and eukaryotic B12-dependent methionine synthase (MetH) (2.1.1.13 from EC), a large, modular protein that catalyzes the transfer of a methyl group from methyltetrahydrofolate (CH3-H4folate) to Hcy to form methionine, using cobalamin as an intermediate methyl carrier. Prokaryotic and eukaryotic dihydropteroate synthase (DHPS) (2.5.1.15 from EC). It catalyzes the condensation of para-aminobenzoic acid (pABA) with 7,8- dihydropterin-pyrophosphate (DHPPP), eliminating pyrophosphate to form 7,8- dihydropteroate which is subsequently converted to tetrahydrofolate. Moorella thermoacetica 5-methyltetrahydrofolate corrinoid/iron sulphur protein methyltransferase (MeTr). It transfers the N5-methyl group from CH3-H4folate to a cob(I)amide centre in another protein, the corrinoid iron sulphur protein. ; GO: 0042558 pteridine-containing compound metabolic process; PDB: 2VP8_B 2BMB_A 2Y5S_B 2Y5J_A 3BOF_B 1Q7Q_B 1Q85_B 1Q7Z_A 1Q7M_A 1Q8A_B ....
Probab=20.36 E-value=1.4e+02 Score=27.79 Aligned_cols=39 Identities=18% Similarity=0.291 Sum_probs=23.3
Q ss_pred eeeeccCCCcccCCccCCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCcEEEEe
Q 011738 139 MLFLESPIGVGFSYSNTTNDYEMLGDDFTANDSYTFLHKWFLKFPSYRRRTFYIAG 194 (478)
Q Consensus 139 ~l~iD~PvG~GfSy~~~~~~~~~~~~~~~a~~~~~~l~~F~~~fp~~~~~~~~i~G 194 (478)
=|++| | |+||+ ...+....+++.|+.|-.. .+.++.+.|
T Consensus 165 ~Ii~D-P-gigf~-----------~~~~~~~~~l~~i~~~~~~----~~~p~l~~~ 203 (210)
T PF00809_consen 165 RIILD-P-GIGFG-----------KDPEQNLELLRNIEELKEL----FGYPILVGG 203 (210)
T ss_dssp GEEEE-T-TTTSS-----------TTHHHHHHHHHTHHHHHTT----SSSEBEEEE
T ss_pred HEeec-c-ccCcC-----------CCHHHHHHHHHHHHHHHHh----CCCCEEEEE
Confidence 39999 8 99994 2334455666666665433 234555544
Done!