Query 011741
Match_columns 478
No_of_seqs 137 out of 1646
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 14:23:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011741.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011741hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4djk_A Probable glutamate/gamm 100.0 6.9E-48 2.4E-52 400.8 35.4 413 14-459 35-464 (511)
2 3l1l_A Arginine/agmatine antip 100.0 4.4E-46 1.5E-50 380.5 37.0 402 14-470 35-438 (445)
3 3gia_A Uncharacterized protein 100.0 2.4E-43 8.1E-48 360.2 35.8 361 10-423 30-391 (444)
4 2jln_A MHP1; hydantoin, transp 98.5 0.0015 5.1E-08 66.6 36.3 132 18-164 55-187 (501)
5 2a65_A Leutaa, Na(+):neurotran 97.8 0.0076 2.6E-07 61.1 25.4 189 117-323 166-370 (519)
6 3dh4_A Sodium/glucose cotransp 97.3 0.12 4.2E-06 52.8 26.8 32 286-317 318-349 (530)
7 2xq2_A Sodium/glucose cotransp 96.9 0.39 1.3E-05 49.8 26.0 31 286-316 347-377 (593)
8 2wsw_A BCCT family betaine/car 85.1 33 0.0011 34.3 27.8 90 289-386 408-497 (509)
9 4ain_A Glycine betaine transpo 78.1 60 0.002 32.6 16.0 46 274-323 398-443 (539)
10 3j1z_P YIIP, cation efflux fam 59.1 47 0.0016 30.7 9.6 39 363-407 43-81 (306)
11 3h90_A Ferrous-iron efflux pum 35.7 1.2E+02 0.0042 27.4 8.3 24 387-410 52-75 (283)
12 3rko_J NADH-quinone oxidoreduc 23.2 3.4E+02 0.011 22.9 8.7 8 340-347 24-31 (184)
No 1
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A
Probab=100.00 E-value=6.9e-48 Score=400.78 Aligned_cols=413 Identities=14% Similarity=0.113 Sum_probs=314.9
Q ss_pred hhccCcchhHHHHHHHHHH-HHHHHHHHHHHhh--hcCCCCchhhHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHHH
Q 011741 14 LLYAGPASLVWGWVVVSFF-TWFVGLAMAEICS--SFPTTGSLYFWAAHLASPKWGPFASWCCAWLETIGLIAGMGTQAY 90 (478)
Q Consensus 14 ~~~~G~~~~~l~~li~~~~-~~~~a~~~~el~~--~~p~~GG~y~~~~~~~g~~~g~~~g~~~~~~~~~~~~~~~a~~~~ 90 (478)
.+.+||. .++.+++++++ .++.+++|+|+++ ++| +||.|.|++|.+||+ .||+++|.+|+++....+....
T Consensus 35 ~~~~G~~-~~~~~~i~~~~~~l~~al~~ael~s~~~~P-~GG~y~~~~~~~g~~----~g~~~g~~~~~~~~~~~~~~~~ 108 (511)
T 4djk_A 35 FATSGFS-LVFFLLLGGILWFIPVGLCAAEMATVDGWE-EGGVFAWVSNTLGPR----WGFAAISFGYLQIAIGFIPMLY 108 (511)
T ss_dssp HHTTTTH-HHHHHHHHHHHTHHHHHHHHHHHHTTSCC----CHHHHHHHHHCHH----HHHHHHHHHHHHHHHHTHHHHH
T ss_pred HHhhHHH-HHHHHHHHHHHHHHHHHHHHHHHcccccCC-CCChhhhHHhhcCch----HHHHHHHHHHHHHHHHHHHHHH
Confidence 4678888 66666666665 4679999999999 999 999999999997666 5999999999999988888877
Q ss_pred HHHHHHHHHHHHhcCCCCCCCccCchhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH-HHHhhhhhheeccc
Q 011741 91 AGSQTLQSIILLCTGTNKDGGYFAPKWLFLCMYIGLTIIWAVLNTFALEVIAFIDIISMWWQVAG-GLVIIIMLPLVALT 169 (478)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~i~~-~~~~~i~~~~~~~~ 169 (478)
....++...+. .+++..++|...+++++++++.+.+|++|.|..++++++.+.++++. ++++++.++.....
T Consensus 109 ~~~~~~~~~~~-------~p~~~~~~~~~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 181 (511)
T 4djk_A 109 FVLGALSYILK-------WPALNEDPITKTIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLHS 181 (511)
T ss_dssp HHHHHHHTTTT-------CGGGTSCSSHHHHHHHHHHHHHHHHHHTCSSSHHHHTHHHHHHTTHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHhc-------CcccccCcHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77777754421 13555667888889999999999999999999999999998886554 44444444432211
Q ss_pred ccccc--cccceeeccCCCCCCCCchhHHHHHHHhhhhhhhccchhhhhhhhhcCcccccchHHHHHHHHHHHHHHHHHH
Q 011741 170 TQSAS--YVFTHFEMSPEATGISSKPYAVILSFLVSQYSLYGYDSAAHLTEETKGADKTGPIAILSSIGIISIFGWALIL 247 (478)
Q Consensus 170 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~af~G~e~~~~~~~E~k~p~k~ip~ai~~~~~~~~~~y~l~~~ 247 (478)
.++.+ .+.+++ .+. +. ..+.+.++...+|+|.|+|++++++||+|||+|++||+++.++.++.++|++..+
T Consensus 182 ~~~~~~~~~~~~~---~~~--~~--~~~~~~~~~~~~~a~~G~e~~~~~a~E~k~P~k~ip~ai~~~~~~~~~~y~~~~~ 254 (511)
T 4djk_A 182 GAPVAIEMDSKTF---FPD--FS--KVGTLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGGL 254 (511)
T ss_dssp -----------CC---CCC--TT--STTTTTTHHHHHHHHTTGGGGTGGGSSSSCCTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccccCccccc---CCC--cc--cchHHHHHHHHHHHHhhHHHHHHHHHhccCcccchhHHHHHHHHHHHHHHHHHHH
Confidence 11111 112222 011 11 0123345667789999999999999999999999999999999999999999999
Q ss_pred HHHhhccChhhhhcCCCccCCCccHHHHHHHHhccccC--CchhHHHHHHHHHHHHHHHHHHHHhhhhhhHHHhcCCCCC
Q 011741 248 ALCFSIQDFSYLYDKSNETAGAFVPAQILYDAFHGRYH--NSTGAIILLIVIWGSFFFGGLSVTTSAARVVYALSRDKGI 325 (478)
Q Consensus 248 ~~~~~~~~~~~l~~~~~~~~g~p~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~sR~l~~~a~dg~l 325 (478)
+....+ |.+++..++ + ..+.+....+.. | .++...++.+..+++.+++.++.+.+.+|++++|||||.+
T Consensus 255 ~~~~~~-~~~~~~~~~------~-~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sR~l~a~ardg~l 325 (511)
T 4djk_A 255 SIAMVI-PGNEINLSA------G-VMQTFTVLMSHV-APEIEWTVRVISALLLLGVLAEIASWIVGPSRGMYVTAQKNLL 325 (511)
T ss_dssp HHHTTS-CTTSCCSSS------T-HHHHHHHHHSSS-CSSCTTHHHHHHHHHHHHHHHHHHHHTTHHHHHTCHHHHGGGC
T ss_pred HHHeec-CHhhccccc------h-HHHHHHHHHHHh-CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcc
Confidence 999988 666554332 2 445565655443 6 5567888899999999999999999999999999999999
Q ss_pred cccccccccccCCCChHHHHHHHHHHHHHHHcccccc-----HHHHHHHHHHHHHHHHHHHHHHHHH-HHhhccccCCCC
Q 011741 326 PFSSIWRQLHPKHKVPSNAVWLCAAICIILGLPILKV-----NVVFTAITSICTIGWVGGYAVPIFA-RMVMAEQKFNAG 399 (478)
Q Consensus 326 P~~~~~~~~~~~~~~P~~A~~~~~~i~~i~~l~~~~~-----~~~~~~l~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~ 399 (478)
| ++|+|+| |+++|++|++++..+..+..+. .++ .+.++.+.++++...++.|.++..+ ..+|||+++.+|
T Consensus 326 P--~~~~~~~-~~~~P~~ai~~~~~~~~l~~~~-~~~~~~~~~~~f~~l~~~~~~~~~~~y~~~~~~~~~~r~~~~~~~~ 401 (511)
T 4djk_A 326 P--AAFAKMN-KNGVPVTLVISQLVITSIALII-LTNTGGGNNMSFLIALALTVVIYLCAYFMLFIGYIVLVLKHPDLKR 401 (511)
T ss_dssp S--SSCCCCC-SSSCCCHHHHHHHHHHHHHHHH-HHSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCC
T ss_pred c--HHHHhcC-CCCCcHHHHHHHHHHHHHHHHH-hccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9 9999999 6799999999995544433322 233 5679999999999999999997654 444556667789
Q ss_pred CcccC--Cch-hhHHHHHHHHHHHHHHHhccCCCCCCCCCCccchHHHHHHHHHHHHHhhhcc
Q 011741 400 PFYLG--KAS-RPICLIAFLWICYTCSVFLLPTFYPISWDTFNYAPVALGVGLGLIMLWWLLD 459 (478)
Q Consensus 400 ~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (478)
|||.| +++ +.+++++.+++++.++...+|...+.+.++++|.....+.++++..++|+.+
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 464 (511)
T 4djk_A 402 TFNIPGGKGVKLVVAIVGLLTSIMAFIVSFLPPDNIQGDSTDMYVELLVVSFLVVLALPFILY 464 (511)
T ss_dssp SCCCSSTTHHHHHHHHHHHHHHHHHHHHTTCCCSCSTTCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CeecCCCchHHHHHHHHHHHHHHHHHHeeeeCCccccCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99997 444 5688999999999999999998888888888998888888888777777763
No 2
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=100.00 E-value=4.4e-46 Score=380.48 Aligned_cols=402 Identities=17% Similarity=0.167 Sum_probs=307.1
Q ss_pred hhccCcchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchhhHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 011741 14 LLYAGPASLVWGWVVVSFFTWFVGLAMAEICSSFPTTGSLYFWAAHLASPKWGPFASWCCAWLETIGLIAGMGTQAYAGS 93 (478)
Q Consensus 14 ~~~~G~~~~~l~~li~~~~~~~~a~~~~el~~~~p~~GG~y~~~~~~~g~~~g~~~g~~~~~~~~~~~~~~~a~~~~~~~ 93 (478)
++.+||. .+++|+++++.+++.+++|+|+++++|++||.|.|++|.+| +..|++.+|.+++++....+..+..+.
T Consensus 35 ~~~~G~~-~~~~~li~~~~~~~~a~~~~el~~~~p~~Gg~y~~~~~~~G----~~~g~~~g~~~~~~~~~~~~~~~~~~~ 109 (445)
T 3l1l_A 35 LASTGGI-AIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFG----PFLGYQTNVLYWLACWIGNIAMVVIGV 109 (445)
T ss_dssp HHHHCTH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCTTTHHHHHHHHSC----HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHccCCCCCCchhhHHhHcC----ChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567887 89999999999999999999999999999999999999955 557999999999999888888887887
Q ss_pred HHHHHHHHHhcCCCCCCCccCchhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhheeccccccc
Q 011741 94 QTLQSIILLCTGTNKDGGYFAPKWLFLCMYIGLTIIWAVLNTFALEVIAFIDIISMWWQVAGGLVIIIMLPLVALTTQSA 173 (478)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~ 173 (478)
+++...++. ..+++...+++++++++...+|.+|+|..+|++.+.+.++++.++.+++.++...+ +.
T Consensus 110 ~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~---~~ 176 (445)
T 3l1l_A 110 GYLSYFFPI----------LKDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFR---GE 176 (445)
T ss_dssp HHTTTTCGG----------GGSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCC---CC
T ss_pred HHHHHHCcc----------ccccHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---hh
Confidence 777654321 12356778889999999999999999999999999999999988888777664321 11
Q ss_pred ccccceeeccCCCCCCCCchhHHHHHHHhhhhhhhccchhhhhhhhhcCcccccchHHHHHHHHHHHHHHHHHHHHHhhc
Q 011741 174 SYVFTHFEMSPEATGISSKPYAVILSFLVSQYSLYGYDSAAHLTEETKGADKTGPIAILSSIGIISIFGWALILALCFSI 253 (478)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~af~G~e~~~~~~~E~k~p~k~ip~ai~~~~~~~~~~y~l~~~~~~~~~ 253 (478)
++ .+++ ++.++. +..++..++...+|+|.|+|.+++++||+|||+|++||++..+.+++.++|++..+......
T Consensus 177 ~~-~~~~----~~~~~~-~~~~~~~~~~~~~~af~G~e~~~~~~~e~k~p~r~ip~a~~~~~~~~~~~y~~~~~~~~~~~ 250 (445)
T 3l1l_A 177 TY-MAAW----NVSGLG-TFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMI 250 (445)
T ss_dssp CC-CCC----------------HHHHHHHHHHTTTTTTHHHHGGGGBSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hc-cccc----CccCCc-cHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 11 1222 222221 23468888999999999999999999999999999999999999999999999999999888
Q ss_pred cChhhhhcCCCccCCCccHHHHHHHHhccccCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhHHHhcCCCCCcccccccc
Q 011741 254 QDFSYLYDKSNETAGAFVPAQILYDAFHGRYHNSTGAIILLIVIWGSFFFGGLSVTTSAARVVYALSRDKGIPFSSIWRQ 333 (478)
Q Consensus 254 ~~~~~l~~~~~~~~g~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~sR~l~~~a~dg~lP~~~~~~~ 333 (478)
|.+++.+.+ +| ..+.+.+..+ + +...++.+..+++.+++.++.+.+.+|++++|||||.+| ++|+|
T Consensus 251 -~~~~~~~~~-----~p-~~~~~~~~~g----~-~~~~~~~~~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP--~~~~~ 316 (445)
T 3l1l_A 251 -PNAALRVSA-----SP-FGDAARMALG----D-TAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFP--PIFAR 316 (445)
T ss_dssp -CTTTSCSTT-----CT-HHHHHHHHHC----T-THHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTSSC--GGGGC
T ss_pred -CHHHHhccC-----cH-HHHHHHHHhh----H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc--HHHHh
Confidence 776664432 45 4455554443 2 377888899999999999999999999999999999999 99999
Q ss_pred cccCCCChHHHHHHHHHHHHHHHcccccc--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccCCchhhHH
Q 011741 334 LHPKHKVPSNAVWLCAAICIILGLPILKV--NVVFTAITSICTIGWVGGYAVPIFARMVMAEQKFNAGPFYLGKASRPIC 411 (478)
Q Consensus 334 ~~~~~~~P~~A~~~~~~i~~i~~l~~~~~--~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (478)
+| |+++|+++++++.+++.++.+....+ .+.++.+.++++...++.|.+...+.++.|||+.++ |.| ..+.++
T Consensus 317 ~~-~~~~P~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~y~~~~~~~~~~r~~~~~~---r~~-~~~~~~ 391 (445)
T 3l1l_A 317 VN-KAGTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGK---ARP-AYLAVT 391 (445)
T ss_dssp CC-TTCCCHHHHHHHHHHHHHHHHSTTSHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHSSSSGG---GCT-TTHHHH
T ss_pred cC-CCCCCHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc---ccc-hhHHHH
Confidence 99 67999999999999888776644333 356889999999999999999766655554433222 333 667778
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCccchHHHHHHHHHHHHHhhhcccceeeeCCccc
Q 011741 412 LIAFLWICYTCSVFLLPTFYPISWDTFNYAPVALGVGLGLIMLWWLLDARKWFTGPVRN 470 (478)
Q Consensus 412 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (478)
+++.+.+++.+.... ........++++.+..+|..++|+++++++++
T Consensus 392 ~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~g~~~y~~~~~~~~~~~~~~ 438 (445)
T 3l1l_A 392 TIAFLYCIWAVVGSG------------AKEVMWSFVTLMVITAMYALNYNRLHKNPYPL 438 (445)
T ss_dssp HHHHHHHHHHHHHSC------------HHHHHHHHHHHHHHHHHHHHHHSTTCCCSSCC
T ss_pred HHHHHHHHHHHHHcC------------HHHHHHHHHHHHHHHHHHHHHhhhcccCcccc
Confidence 887777776543221 01234445555556666655555544443333
No 3
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=100.00 E-value=2.4e-43 Score=360.19 Aligned_cols=361 Identities=12% Similarity=0.108 Sum_probs=287.6
Q ss_pred hhhhhhccCcchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchhhHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHH
Q 011741 10 EEKCLLYAGPASLVWGWVVVSFFTWFVGLAMAEICSSFPTTGSLYFWAAHLASPKWGPFASWCCAWLETIGLIAGMGTQA 89 (478)
Q Consensus 10 ~~~~~~~~G~~~~~l~~li~~~~~~~~a~~~~el~~~~p~~GG~y~~~~~~~g~~~g~~~g~~~~~~~~~~~~~~~a~~~ 89 (478)
.+.+.+.+||. .+++|+++++++++.+++|+|+++++|++||.|.|++|.+||++ .+...+|.+++++....+..+
T Consensus 30 ~~~~~~~~G~~-~~~~~li~~~~~~~~~~~~~el~~~~P~~Gg~y~~~~~~~G~~~---~~g~~~~~~~~~~~~~~a~~~ 105 (444)
T 3gia_A 30 FGVGAKIAGRN-LPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDNI---ITGALSILLWMSYVISIALFA 105 (444)
T ss_dssp HHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHCSSH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHhHHHHhCcch---HHHHHHHHHHHHHHHHHHHHH
Confidence 45677888996 99999999999999999999999999999999999999988863 333457999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCccCchhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhheeccc
Q 011741 90 YAGSQTLQSIILLCTGTNKDGGYFAPKWLFLCMYIGLTIIWAVLNTFALEVIAFIDIISMWWQVAGGLVIIIMLPLVALT 169 (478)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~ 169 (478)
..+++++...++ ..++++...+++++++++...+|.+|+|..+|++.+.+.+|++.++.+++.++...+
T Consensus 106 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~~~~i~~~~~~ii~~~~~~~- 174 (444)
T 3gia_A 106 KGFAGYFLPLIN----------APINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIH- 174 (444)
T ss_dssp HHHHHHHHHHTT----------CCCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHhC----------CCCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 999999987642 234566777888999999999999999999999999999999999888887765421
Q ss_pred ccccccccceeeccCCCCCCCCch-hHHHHHHHhhhhhhhccchhhhhhhhhcCcccccchHHHHHHHHHHHHHHHHHHH
Q 011741 170 TQSASYVFTHFEMSPEATGISSKP-YAVILSFLVSQYSLYGYDSAAHLTEETKGADKTGPIAILSSIGIISIFGWALILA 248 (478)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~af~G~e~~~~~~~E~k~p~k~ip~ai~~~~~~~~~~y~l~~~~ 248 (478)
+.+ +++. +.+++ .+++.++...+|+|.|+|.+++++||+|||+|++||++..+.+++.++|++..++
T Consensus 175 --~~~--~~~~--------~~~~g~~~~~~~~~~~~~a~~G~e~~~~~~~e~k~P~r~ip~ai~~~~~~~~~~y~~~~~~ 242 (444)
T 3gia_A 175 --PSY--VIPD--------LAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAIS 242 (444)
T ss_dssp --GGG--TSCC--------CSHHHHHHHHHHHHHGGGGGTHHHHHHTTGGGBSSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --hhh--cCCC--------CCCcchHHHHHHHHHHHHHHHhHHHHHHHHHHccCcccchhHHHHHHHHHHHHHHHHHHHH
Confidence 111 1111 11222 3688888889999999999999999999999999999999999999999999999
Q ss_pred HHhhccChhhhhcCCCccCCCccHHHHHHHHhccccCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhHHHhcCCCCCccc
Q 011741 249 LCFSIQDFSYLYDKSNETAGAFVPAQILYDAFHGRYHNSTGAIILLIVIWGSFFFGGLSVTTSAARVVYALSRDKGIPFS 328 (478)
Q Consensus 249 ~~~~~~~~~~l~~~~~~~~g~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~sR~l~~~a~dg~lP~~ 328 (478)
..... |++++.++++ .| ..+...+..+ ++...++.+..+++.+++.++.+.+.+|++++|||||.+|
T Consensus 243 ~~~~~-~~~~l~~~~~----~~-~~~~~~~~~g-----~~~~~~i~~~~~~~~~~~~~~~~~~~sR~l~a~a~dg~lP-- 309 (444)
T 3gia_A 243 AIGNL-PIDELIKASE----NA-LAVAAKPFLG-----NLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELP-- 309 (444)
T ss_dssp HHTTS-CHHHHHHTGG----GH-HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHSSCC--
T ss_pred HHhCC-CHHHHhcccc----hh-HHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--
Confidence 99888 8887765432 33 3344444333 2366788889999999999999999999999999999999
Q ss_pred ccccccccCCCChHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccCCchh
Q 011741 329 SIWRQLHPKHKVPSNAVWLCAAICIILGLPILKVNVVFTAITSICTIGWVGGYAVPIFARMVMAEQKFNAGPFYLGKASR 408 (478)
Q Consensus 329 ~~~~~~~~~~~~P~~A~~~~~~i~~i~~l~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (478)
++|+|+| | ++|.++++++.+++.++.+.. .++.+.++.+.+.++.|.+...+.++.||++. ++ + +.+
T Consensus 310 ~~f~~~~-~-~~P~~a~~~~~~~~~~~~~~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~----~-~~~ 376 (444)
T 3gia_A 310 EFFERKV-W-FKSTEGLYITSALGVLFALLF-----NMEGVASITSAVFMVIYLFVILSHYILIDEVG-GR----K-EIV 376 (444)
T ss_dssp SSCCTTS-C-CSCTHHHHHHHHHHHHHHHHS-----CHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHC-CC----H-HHH
T ss_pred HHHhCCC-C-CCCcHHHHHHHHHHHHHHHHc-----CHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-Cc----c-hHH
Confidence 9999988 5 569999999999998876642 35778899999999999997666555544431 11 1 444
Q ss_pred hHHHHHHHHHHHHHH
Q 011741 409 PICLIAFLWICYTCS 423 (478)
Q Consensus 409 ~~~~~~~~~~~~~~~ 423 (478)
.++++.+++......
T Consensus 377 ~~~~~~~~~~~~~~~ 391 (444)
T 3gia_A 377 IFSFIVVLGVFLLLL 391 (444)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 555555444444433
No 4
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A
Probab=98.46 E-value=0.0015 Score=66.63 Aligned_cols=132 Identities=15% Similarity=0.059 Sum_probs=75.8
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCCc-hhhHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011741 18 GPASLVWGWVVVSFFTWFVGLAMAEICSSFPTTGS-LYFWAAHLASPKWGPFASWCCAWLETIGLIAGMGTQAYAGSQTL 96 (478)
Q Consensus 18 G~~~~~l~~li~~~~~~~~a~~~~el~~~~p~~GG-~y~~~~~~~g~~~g~~~g~~~~~~~~~~~~~~~a~~~~~~~~~~ 96 (478)
|-. ...+++...+..+......+-.+..-|+.|- .....|..||++- +.+......+..+...+......++.+
T Consensus 55 GLs-~~~a~lai~lG~li~~~~~~l~~~~G~~~Gl~~~v~~R~~FG~~G----s~i~~ll~~i~~igw~~v~~~~gg~al 129 (501)
T 2jln_A 55 SFQ-VWQVIVAIAAGCTIAVILLFFTQSAAIRWGINFTVAARMPFGIRG----SLIPITLKALLSLFWFGFQTWLGALAL 129 (501)
T ss_dssp TSC-HHHHHHHHHHHHHHHHHHHHHHTHHHHHHCCCHHHHTTTTSCTTT----THHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcC-HHHHHHHHHHHHHHHHHHHHHHhHHHhhcCCChhhhhHhhcchhH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 544 4555554444555555555555555555554 4458888877764 444444444444444455666666666
Q ss_pred HHHHHHhcCCCCCCCccCchhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 011741 97 QSIILLCTGTNKDGGYFAPKWLFLCMYIGLTIIWAVLNTFALEVIAFIDIISMWWQVAGGLVIIIMLP 164 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~i~~~~~~~i~~~ 164 (478)
..++.... +.. +.+. ..+++.++...+..+|.|...+++.+...+.++..+.+.+..+
T Consensus 130 ~~~~~~~~------g~~-~~~v---~~~i~~~l~~~~~~~G~~~i~~~~~~~~p~~~i~~i~~~~~~l 187 (501)
T 2jln_A 130 DEITRLLT------GFT-NLPL---WIVIFGAIQVVTTFYGITFIRWMNVFASPVLLAMGVYMVYLML 187 (501)
T ss_dssp HHHHHHHH------CCC-CHHH---HHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhc------Ccc-hHHH---HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65543210 111 1222 2223445666777899999999999988888777766655544
No 5
>2a65_A Leutaa, Na(+):neurotransmitter symporter (SNF family); membrane protein, transport protein; HET: BOG; 1.65A {Aquifex aeolicus} SCOP: f.54.1.1 PDB: 2q6h_A* 2q72_A* 2qb4_A* 2qei_A* 3f3a_A* 3f3c_A* 3f3d_A* 3f3e_A* 3f48_A* 3f4i_A* 3f4j_A* 3usg_A* 3usi_A 3usj_A 3usk_A 3usl_A* 3usm_A* 3uso_A 3usp_A* 3qs5_A* ...
Probab=97.82 E-value=0.0076 Score=61.12 Aligned_cols=189 Identities=14% Similarity=0.184 Sum_probs=102.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHHHHHHHhhhhhheecc----cccccccccceeeccCCCCCCCC
Q 011741 117 WLFLCMYIGLTIIWAVLNTFAL-EVIAFIDIISMWWQVAGGLVIIIMLPLVAL----TTQSASYVFTHFEMSPEATGISS 191 (478)
Q Consensus 117 ~~~~~i~~~~~~~~~~l~~~g~-~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 191 (478)
|...+.-++..++...+..+|+ |-..|.+.++..+-.+.++++.+-++...+ ..+.-++-+++ +|+.
T Consensus 166 ~~~~~~~~~~w~i~~~ii~~Gv~kgiek~~~~~mp~l~vlliiL~ir~ltLpGp~~~A~~Gl~~~~~P--------d~s~ 237 (519)
T 2a65_A 166 LFAYIVFLITMFINVSILIRGISKGIERFAKIAMPTLFILAVFLVIRVFLLETPNGTAADGLNFLWTP--------DFEK 237 (519)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTTTHHHHHHHHHHHHHHHHHHHHHHHTTCEETTEEHHHHHHHHHSC--------CTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHhcC--------CHHH
Confidence 5544444556666777788899 668999999888877777777666654332 11111111111 1221
Q ss_pred --chhHHHHHHHhhhhhh-hccchhhhhhhhhcCcccccchHHHHHHHHHHHHHHHHHHHHH------h-hccC-hhhhh
Q 011741 192 --KPYAVILSFLVSQYSL-YGYDSAAHLTEETKGADKTGPIAILSSIGIISIFGWALILALC------F-SIQD-FSYLY 260 (478)
Q Consensus 192 --~~~~~~~~~~~~~~af-~G~e~~~~~~~E~k~p~k~ip~ai~~~~~~~~~~y~l~~~~~~------~-~~~~-~~~l~ 260 (478)
+...+..+..-++|++ .|+-....+++-.|+ +.|++|.-....+.-...-++..+++. . .. + .+++.
T Consensus 238 L~~~~vw~~A~gQ~FFSLslG~G~~ity~SY~~~-~~n~~~~a~~v~~~n~~~sllaG~~IF~~lgf~a~g~-~~~~~v~ 315 (519)
T 2a65_A 238 LKDPGVWIAAVGQIFFTLSLGFGAIITYASYVRK-DQDIVLSGLTAATLNEKAEVILGGSISIPAAVAFFGV-ANAVAIA 315 (519)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTSSHHHHHHTTSCT-TSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCH-HHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHhHHHHhHHhhhhcccCC-CcChHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-cchHHHh
Confidence 1234666777777877 688888888888776 677787666555554443333222111 1 11 2 23322
Q ss_pred cCCCccCCCccHHHHHHHHhccccCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhHHHhcCCC
Q 011741 261 DKSNETAGAFVPAQILYDAFHGRYHNSTGAIILLIVIWGSFFFGGLSVTTSAARVVYALSRDK 323 (478)
Q Consensus 261 ~~~~~~~g~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~sR~l~~~a~dg 323 (478)
++ |.| .+......+.+..-..+.+..++.++..+...+++..+.-...-+.-+|+
T Consensus 316 ~~-----G~p---gL~Fi~~P~af~~mp~g~~~~~lFF~~l~~agltS~i~~~E~~vt~l~D~ 370 (519)
T 2a65_A 316 KA-----GAF---NLGFITLPAIFSQTAGGTFLGFLWFFLLFFAGLTSSIAIMQPMIAFLEDE 370 (519)
T ss_dssp HH-----CSS---HHHHTHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cC-----CCC---ceeHHHHHHHHHhCCCccchHHHHHHHHHHHHHHHHHHHhhHhHHHHHHh
Confidence 22 223 33333333333322245555666555556556665555555555555555
No 6
>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus}
Probab=97.32 E-value=0.12 Score=52.81 Aligned_cols=32 Identities=9% Similarity=-0.016 Sum_probs=22.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHhhhhhhHH
Q 011741 286 NSTGAIILLIVIWGSFFFGGLSVTTSAARVVY 317 (478)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sR~l~ 317 (478)
+++..-++..+.+.+..++..+.+++.+-.+.
T Consensus 318 p~~l~Gl~~a~llAA~mST~ss~l~s~st~~~ 349 (530)
T 3dh4_A 318 PVGVKGVVFAALAAAIVSSLASMLNSTATIFT 349 (530)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 34466666777777888888888888876654
No 7
>2xq2_A Sodium/glucose cotransporter; transport protein, inverted repeats, LEUT-fold, galactose; 2.73A {Vibrio parahaemolyticus} PDB: 2xq2_B 2kpe_A
Probab=96.90 E-value=0.39 Score=49.75 Aligned_cols=31 Identities=10% Similarity=0.004 Sum_probs=21.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHhhhhhhH
Q 011741 286 NSTGAIILLIVIWGSFFFGGLSVTTSAARVV 316 (478)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sR~l 316 (478)
+++..-++..+.+.+..++..+.+++.+-.+
T Consensus 347 p~~l~gl~~a~llaA~mST~~s~l~a~st~~ 377 (593)
T 2xq2_A 347 PVGVKGVVFAALAAAIVSSLASMLNSTATIF 377 (593)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3446666667777778888888887777655
No 8
>2wsw_A BCCT family betaine/carnitine/choline transporter; transport protein, SD methionine, membrane protein; HET: CM5 1PE; 2.29A {Proteus mirabilis} PDB: 2wsx_A* 3hfx_A*
Probab=85.05 E-value=33 Score=34.27 Aligned_cols=90 Identities=7% Similarity=-0.105 Sum_probs=46.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhHHHhcCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHccccccHHHHHH
Q 011741 289 GAIILLIVIWGSFFFGGLSVTTSAARVVYALSRDKGIPFSSIWRQLHPKHKVPSNAVWLCAAICIILGLPILKVNVVFTA 368 (478)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~sR~l~~~a~dg~lP~~~~~~~~~~~~~~P~~A~~~~~~i~~i~~l~~~~~~~~~~~ 368 (478)
.+.+...+.++..+.-..+..-+.+-++-.++.+|.-+ +.|| ..+.+..|-...-.+...++..+..+..+.
T Consensus 408 ~~~i~~~l~iil~~~FfvTSaDS~s~vi~~~ss~g~~~------~~~p--~~~~rifW~v~~g~va~~LL~~ggl~aLQ~ 479 (509)
T 2wsw_A 408 LSTATMWGFFILCFIATVTLINACSYTLAMSTCRSMKE------GADP--PLLVRIGWSVLVGIIGIILLALGGLKPIQT 479 (509)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHBCCCCT------TCCC--CHHHHHHHHHHHHHHHHHHHHHCSSHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcCCCCC------CCCC--ChhHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 45566666666666667777777888888887665322 1122 234444443333222222222233456666
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 011741 369 ITSICTIGWVGGYAVPIF 386 (478)
Q Consensus 369 l~~~~~~~~~~~~~l~~~ 386 (478)
...++.+...+..++.+.
T Consensus 480 ~~ii~alPf~~v~l~~~~ 497 (509)
T 2wsw_A 480 AIIAGGCPLFFVNIMVTL 497 (509)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHH
Confidence 666665555554444333
No 9
>4ain_A Glycine betaine transporter BETP; membrane protein, chemosensor and osmosensor, secondary TRAN sodium coupled transport; HET: FLC CM5; 3.10A {Corynebacterium glutamicum} PDB: 4doj_A* 2w8a_A 2wit_A 3p03_A
Probab=78.13 E-value=60 Score=32.62 Aligned_cols=46 Identities=20% Similarity=0.160 Sum_probs=28.0
Q ss_pred HHHHHHhccccCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhHHHhcCCC
Q 011741 274 QILYDAFHGRYHNSTGAIILLIVIWGSFFFGGLSVTTSAARVVYALSRDK 323 (478)
Q Consensus 274 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~sR~l~~~a~dg 323 (478)
..+...++.. | .+.+...+.++..+.-..+..-+.+-++-.++..|
T Consensus 398 ~alf~~l~~l---P-~~~i~~~l~iili~~FfvTSaDS~s~vl~~~ss~g 443 (539)
T 4ain_A 398 EQLFGLLHAL---P-GGQIMGIIAMILLGTFFITSADSASTVMGTMSQHG 443 (539)
T ss_dssp HHHHHHHHTS---T-THHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHTTT
T ss_pred hHHHHHHHHC---c-hHHHHHHHHHHHHHHHHHHccchHHHHHHHHHcCC
Confidence 4444555432 2 45566666666666666677777777777777554
No 10
>3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis}
Probab=59.08 E-value=47 Score=30.72 Aligned_cols=39 Identities=10% Similarity=0.007 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcccCCch
Q 011741 363 NVVFTAITSICTIGWVGGYAVPIFARMVMAEQKFNAGPFYLGKAS 407 (478)
Q Consensus 363 ~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 407 (478)
.|.+..+.+..+. ++........+|+++++.||-.+|.-
T Consensus 43 aDa~hsl~D~~s~------~i~l~~~~~s~k~~d~~~pyG~~R~E 81 (306)
T 3j1z_P 43 ASLTDSFADTLAS------IINFIAIRYAIVPADHDHRYGHGKAE 81 (306)
T ss_dssp THHHHTTHHHHHH------HHHHHHHHHHTSCCCCTTSSCCTTHH
T ss_pred HHHHHHHHHHHHH------HHHHHHHHHhCCCCcccCCCchhhHH
Confidence 3555555555332 22233444455666777777665533
No 11
>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A
Probab=35.70 E-value=1.2e+02 Score=27.36 Aligned_cols=24 Identities=17% Similarity=0.008 Sum_probs=13.6
Q ss_pred HHHhhccccCCCCCcccCCchhhH
Q 011741 387 ARMVMAEQKFNAGPFYLGKASRPI 410 (478)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~ 410 (478)
.....+|+++++.||-.+|.-.+.
T Consensus 52 ~~~~s~~~~d~~~pyG~~r~E~l~ 75 (283)
T 3h90_A 52 VVRYSLQPADDNHSFGHGKAESLA 75 (283)
T ss_dssp HHHHHTCCCCSSCSSCSTTHHHHH
T ss_pred HHHHhcCCCCCCCCCcchHHHHHH
Confidence 344455666777777666544333
No 12
>3rko_J NADH-quinone oxidoreductase subunit J; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli}
Probab=23.20 E-value=3.4e+02 Score=22.85 Aligned_cols=8 Identities=25% Similarity=0.380 Sum_probs=4.5
Q ss_pred ChHHHHHH
Q 011741 340 VPSNAVWL 347 (478)
Q Consensus 340 ~P~~A~~~ 347 (478)
-|+++.+.
T Consensus 24 n~v~s~l~ 31 (184)
T 3rko_J 24 NPVHALLY 31 (184)
T ss_dssp SHHHHHHH
T ss_pred cHHHHHHH
Confidence 36666554
Done!