Query 011743
Match_columns 478
No_of_seqs 165 out of 1864
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 04:45:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011743.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011743hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 1.8E-45 3.9E-50 385.4 35.1 463 10-477 32-507 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 5.6E-45 1.2E-49 364.0 29.7 415 9-477 15-443 (498)
3 PRK10207 dipeptide/tripeptide 100.0 3.6E-40 7.7E-45 344.8 35.9 410 9-477 8-428 (489)
4 PRK15462 dipeptide/tripeptide 100.0 4.4E-39 9.5E-44 332.5 35.0 407 11-476 5-426 (493)
5 TIGR00924 yjdL_sub1_fam amino 100.0 2E-38 4.3E-43 331.2 35.1 413 9-477 4-430 (475)
6 PRK09584 tppB putative tripept 100.0 7E-37 1.5E-41 321.4 33.8 404 12-477 18-431 (500)
7 TIGR00926 2A1704 Peptide:H+ sy 100.0 1.5E-30 3.3E-35 277.7 31.2 339 29-418 1-346 (654)
8 PF00854 PTR2: POT family; In 99.9 3.2E-27 7E-32 239.5 14.3 365 82-473 1-369 (372)
9 PRK14995 methyl viologen resis 99.9 8E-24 1.7E-28 222.7 27.9 386 15-477 6-400 (495)
10 PRK11646 multidrug resistance 99.9 1.9E-23 4E-28 214.1 29.1 175 11-214 8-182 (400)
11 PF07690 MFS_1: Major Facilita 99.9 1.8E-23 4E-28 208.8 23.2 346 21-477 2-348 (352)
12 TIGR00900 2A0121 H+ Antiporter 99.9 1.7E-22 3.8E-27 202.6 28.7 346 20-477 4-350 (365)
13 PRK12382 putative transporter; 99.9 2.1E-22 4.5E-27 205.5 29.5 179 9-205 9-187 (392)
14 PRK05122 major facilitator sup 99.9 2.6E-22 5.7E-27 205.2 30.2 186 3-207 4-189 (399)
15 PRK10054 putative transporter; 99.9 3.1E-23 6.7E-28 212.1 22.8 177 11-214 3-179 (395)
16 PRK10504 putative transporter; 99.9 1.4E-22 3E-27 212.0 28.1 179 13-218 8-186 (471)
17 TIGR00711 efflux_EmrB drug res 99.9 9.6E-23 2.1E-27 213.6 24.8 386 17-477 4-397 (485)
18 PRK03545 putative arabinose tr 99.9 4.5E-22 9.7E-27 203.0 27.9 174 14-214 8-181 (390)
19 PRK11551 putative 3-hydroxyphe 99.9 7E-22 1.5E-26 202.4 29.0 349 9-477 9-357 (406)
20 TIGR00891 2A0112 putative sial 99.9 1.6E-21 3.6E-26 198.7 28.9 174 10-210 7-182 (405)
21 TIGR00893 2A0114 d-galactonate 99.9 8.3E-22 1.8E-26 199.2 25.1 154 37-216 15-168 (399)
22 TIGR00710 efflux_Bcr_CflA drug 99.9 4.7E-21 1E-25 194.2 29.3 344 13-475 3-346 (385)
23 TIGR02332 HpaX 4-hydroxyphenyl 99.9 5.9E-21 1.3E-25 196.3 30.3 177 13-216 6-188 (412)
24 PRK10213 nepI ribonucleoside t 99.9 5.6E-21 1.2E-25 195.4 28.9 175 10-211 15-189 (394)
25 cd06174 MFS The Major Facilita 99.9 9.2E-21 2E-25 188.6 28.5 312 18-477 2-314 (352)
26 TIGR00895 2A0115 benzoate tran 99.9 8.4E-21 1.8E-25 192.7 28.6 173 15-214 17-189 (398)
27 PRK15402 multidrug efflux syst 99.9 7E-21 1.5E-25 195.2 28.2 176 13-215 8-186 (406)
28 PRK11195 lysophospholipid tran 99.9 1.1E-20 2.4E-25 193.1 28.9 167 15-212 3-169 (393)
29 TIGR01299 synapt_SV2 synaptic 99.9 1.2E-20 2.6E-25 204.3 30.4 156 35-216 186-354 (742)
30 TIGR00903 2A0129 major facilit 99.9 8.3E-21 1.8E-25 192.1 26.6 161 27-215 3-163 (368)
31 TIGR00899 2A0120 sugar efflux 99.9 1.9E-20 4.1E-25 189.3 28.1 169 21-215 3-174 (375)
32 COG2814 AraJ Arabinose efflux 99.9 2.1E-20 4.5E-25 185.9 27.6 183 9-218 7-189 (394)
33 PRK09874 drug efflux system pr 99.9 7.4E-21 1.6E-25 194.7 24.8 175 14-216 13-192 (408)
34 PRK11652 emrD multidrug resist 99.9 5.1E-20 1.1E-24 188.0 29.6 175 11-212 4-178 (394)
35 PRK12307 putative sialic acid 99.9 2E-20 4.4E-25 192.9 26.7 165 13-204 16-180 (426)
36 PRK15011 sugar efflux transpor 99.9 6.3E-20 1.4E-24 187.5 29.5 190 2-216 2-193 (393)
37 TIGR00886 2A0108 nitrite extru 99.9 2.6E-20 5.7E-25 187.7 25.9 166 16-207 2-178 (366)
38 PRK11663 regulatory protein Uh 99.9 4.2E-20 9E-25 191.4 28.0 152 33-211 41-192 (434)
39 TIGR00881 2A0104 phosphoglycer 99.9 9.6E-21 2.1E-25 190.8 22.6 153 37-215 16-169 (379)
40 TIGR00890 2A0111 Oxalate/Forma 99.9 2.2E-20 4.8E-25 188.0 24.5 154 35-215 22-175 (377)
41 TIGR00894 2A0114euk Na(+)-depe 99.9 8.3E-20 1.8E-24 190.8 29.2 148 45-216 70-218 (465)
42 PRK10489 enterobactin exporter 99.9 2.8E-20 6.1E-25 191.5 25.2 344 16-477 18-361 (417)
43 PRK10406 alpha-ketoglutarate t 99.9 1.2E-19 2.7E-24 187.7 30.0 168 22-208 29-210 (432)
44 TIGR00892 2A0113 monocarboxyla 99.9 4.2E-20 9.1E-25 192.5 25.4 151 40-217 43-194 (455)
45 PRK11273 glpT sn-glycerol-3-ph 99.9 7E-20 1.5E-24 190.7 26.6 174 18-214 28-205 (452)
46 PRK10642 proline/glycine betai 99.9 3E-19 6.4E-24 187.9 31.2 176 14-208 15-204 (490)
47 PRK09705 cynX putative cyanate 99.9 1.2E-19 2.6E-24 185.4 26.8 152 31-210 25-177 (393)
48 PRK11043 putative transporter; 99.9 2.6E-19 5.6E-24 183.3 28.7 170 20-215 8-179 (401)
49 PRK03633 putative MFS family t 99.9 1.5E-19 3.3E-24 183.9 26.6 155 12-193 3-157 (381)
50 PRK03699 putative transporter; 99.9 6.8E-19 1.5E-23 179.9 31.4 174 13-213 5-179 (394)
51 TIGR00897 2A0118 polyol permea 99.9 8E-19 1.7E-23 179.9 31.7 171 12-205 10-181 (402)
52 PRK09556 uhpT sugar phosphate 99.9 4.4E-20 9.5E-25 193.0 22.3 156 39-215 52-210 (467)
53 PRK15403 multidrug efflux syst 99.9 4E-19 8.6E-24 182.8 28.8 148 42-215 42-189 (413)
54 PRK10091 MFS transport protein 99.9 2.8E-19 6E-24 182.1 26.8 174 14-214 2-175 (382)
55 KOG1330 Sugar transporter/spin 99.9 1.2E-20 2.6E-25 187.1 15.7 180 11-217 29-209 (493)
56 TIGR00898 2A0119 cation transp 99.8 5E-19 1.1E-23 186.7 27.6 148 40-216 113-263 (505)
57 PRK10077 xylE D-xylose transpo 99.8 3.8E-19 8.2E-24 186.2 26.3 156 45-215 49-213 (479)
58 PLN00028 nitrate transmembrane 99.8 4.9E-19 1.1E-23 185.5 27.0 174 15-216 36-218 (476)
59 TIGR00879 SP MFS transporter, 99.8 3.1E-19 6.7E-24 185.4 25.0 146 48-216 68-216 (481)
60 PRK09952 shikimate transporter 99.8 1E-18 2.3E-23 181.1 28.0 175 13-206 20-209 (438)
61 PRK11102 bicyclomycin/multidru 99.8 1.2E-18 2.7E-23 176.4 28.0 158 31-215 7-164 (377)
62 PRK09528 lacY galactoside perm 99.8 5.2E-19 1.1E-23 182.3 25.4 354 15-476 10-364 (420)
63 TIGR00887 2A0109 phosphate:H+ 99.8 2E-18 4.3E-23 182.2 30.1 180 15-214 16-222 (502)
64 TIGR00901 2A0125 AmpG-related 99.8 1.7E-18 3.6E-23 174.4 28.0 332 36-475 8-356 (356)
65 PRK15075 citrate-proton sympor 99.8 2.5E-18 5.5E-23 178.0 29.6 172 14-204 14-199 (434)
66 TIGR00882 2A0105 oligosacchari 99.8 1.3E-18 2.9E-23 177.8 26.5 180 15-215 2-181 (396)
67 TIGR00902 2A0127 phenyl propri 99.8 3.6E-18 7.8E-23 173.9 29.3 325 17-471 6-335 (382)
68 PRK08633 2-acyl-glycerophospho 99.8 1.4E-18 3.1E-23 200.7 29.7 155 15-192 9-165 (1146)
69 PRK03893 putative sialic acid 99.8 8.7E-19 1.9E-23 184.4 24.4 167 12-205 17-183 (496)
70 PRK10473 multidrug efflux syst 99.8 5.7E-18 1.2E-22 172.8 29.4 172 17-215 5-176 (392)
71 TIGR00712 glpT glycerol-3-phos 99.8 6.3E-19 1.4E-23 182.8 21.7 157 37-216 48-205 (438)
72 COG2271 UhpC Sugar phosphate p 99.8 4.8E-19 1E-23 174.2 19.1 180 10-215 20-204 (448)
73 PRK10133 L-fucose transporter; 99.8 1E-17 2.2E-22 173.7 29.6 151 15-189 26-176 (438)
74 PRK06814 acylglycerophosphoeth 99.8 3.5E-18 7.6E-23 197.4 27.5 344 28-476 28-382 (1140)
75 PF05977 MFS_3: Transmembrane 99.8 2E-17 4.4E-22 173.5 27.7 344 17-476 12-355 (524)
76 PRK11128 putative 3-phenylprop 99.8 3E-17 6.5E-22 167.1 28.1 156 24-210 13-172 (382)
77 TIGR00883 2A0106 metabolite-pr 99.8 1.9E-17 4.2E-22 167.6 26.0 156 37-210 14-184 (394)
78 TIGR00792 gph sugar (Glycoside 99.8 1.3E-17 2.8E-22 172.5 24.7 343 23-477 7-367 (437)
79 TIGR00896 CynX cyanate transpo 99.8 1.3E-17 2.8E-22 167.9 23.6 149 33-209 17-167 (355)
80 KOG2532 Permease of the major 99.8 1.2E-17 2.5E-22 172.5 23.4 334 45-477 67-406 (466)
81 TIGR00885 fucP L-fucose:H+ sym 99.8 3.6E-16 7.8E-21 160.6 32.2 173 17-213 5-203 (410)
82 COG2223 NarK Nitrate/nitrite t 99.8 1E-16 2.2E-21 158.2 26.3 351 10-477 9-362 (417)
83 PRK15034 nitrate/nitrite trans 99.8 2.5E-16 5.5E-21 161.8 30.0 179 15-216 34-231 (462)
84 TIGR01301 GPH_sucrose GPH fami 99.8 2.1E-16 4.4E-21 163.4 28.8 393 16-477 5-431 (477)
85 KOG0254 Predicted transporter 99.8 2.2E-16 4.8E-21 167.0 28.5 353 52-476 90-443 (513)
86 PRK11010 ampG muropeptide tran 99.7 1.6E-15 3.4E-20 159.5 30.5 174 16-215 13-193 (491)
87 TIGR00889 2A0110 nucleoside tr 99.7 3.5E-16 7.6E-21 161.2 25.0 339 20-476 7-357 (418)
88 KOG0569 Permease of the major 99.7 4E-16 8.7E-21 159.8 24.0 353 54-477 63-417 (485)
89 PRK11902 ampG muropeptide tran 99.7 6.8E-15 1.5E-19 150.8 29.2 162 25-212 9-177 (402)
90 TIGR00806 rfc RFC reduced fola 99.7 2.8E-15 6E-20 151.9 24.9 155 35-217 45-203 (511)
91 PRK09848 glucuronide transport 99.7 7E-15 1.5E-19 152.9 25.7 157 16-189 9-174 (448)
92 PF06609 TRI12: Fungal trichot 99.7 5.7E-14 1.2E-18 147.6 28.9 149 37-213 65-213 (599)
93 PRK10429 melibiose:sodium symp 99.7 1.5E-14 3.1E-19 151.6 24.3 177 20-215 11-199 (473)
94 TIGR00805 oat sodium-independe 99.7 6.5E-15 1.4E-19 158.8 20.8 196 14-216 31-280 (633)
95 PF13347 MFS_2: MFS/sugar tran 99.7 4.7E-15 1E-19 153.3 18.7 343 24-477 10-371 (428)
96 KOG0255 Synaptic vesicle trans 99.6 6.9E-14 1.5E-18 148.3 27.4 141 44-213 111-251 (521)
97 PRK09669 putative symporter Ya 99.6 4.1E-14 8.8E-19 147.1 23.7 181 17-215 11-202 (444)
98 KOG3764 Vesicular amine transp 99.6 1.6E-14 3.5E-19 140.9 15.7 149 45-218 100-248 (464)
99 TIGR02718 sider_RhtX_FptX side 99.6 1E-12 2.2E-17 134.1 28.9 177 17-216 3-183 (390)
100 COG0738 FucP Fucose permease [ 99.6 8.5E-13 1.8E-17 129.8 26.2 137 32-191 29-165 (422)
101 KOG2615 Permease of the major 99.6 2.3E-13 5E-18 132.2 20.4 118 47-191 64-181 (451)
102 TIGR00788 fbt folate/biopterin 99.6 2.4E-13 5.3E-18 142.0 22.0 179 13-216 23-208 (468)
103 PTZ00207 hypothetical protein; 99.5 2.8E-11 6.2E-16 128.0 33.1 154 37-214 48-202 (591)
104 PRK10642 proline/glycine betai 99.5 3.1E-13 6.6E-18 142.3 18.3 179 14-216 249-429 (490)
105 PF01306 LacY_symp: LacY proto 99.5 1.6E-12 3.4E-17 131.1 22.1 345 15-469 7-353 (412)
106 PRK11462 putative transporter; 99.5 4.8E-12 1E-16 132.1 26.5 179 19-215 13-202 (460)
107 PF00083 Sugar_tr: Sugar (and 99.5 9.4E-18 2E-22 174.4 -16.6 140 51-213 46-188 (451)
108 PF03825 Nuc_H_symport: Nucleo 99.5 2.5E-11 5.4E-16 123.9 29.8 136 20-183 7-142 (400)
109 PRK09556 uhpT sugar phosphate 99.5 2.6E-13 5.7E-18 141.9 15.6 178 15-216 258-448 (467)
110 PRK15011 sugar efflux transpor 99.5 9E-13 2E-17 134.7 18.4 178 12-216 213-390 (393)
111 KOG2504 Monocarboxylate transp 99.5 3.7E-12 7.9E-17 133.4 22.5 175 17-218 44-222 (509)
112 KOG2533 Permease of the major 99.5 8.4E-12 1.8E-16 129.6 23.6 150 43-218 73-228 (495)
113 COG2807 CynX Cyanate permease 99.5 3.8E-11 8.2E-16 116.6 25.9 297 36-462 32-330 (395)
114 PRK05122 major facilitator sup 99.5 1.5E-12 3.2E-17 133.2 16.3 171 23-222 224-394 (399)
115 cd06174 MFS The Major Facilita 99.4 3.2E-12 6.9E-17 127.0 16.9 174 15-214 175-349 (352)
116 TIGR00890 2A0111 Oxalate/Forma 99.4 2.7E-12 5.8E-17 129.1 15.8 170 16-210 206-375 (377)
117 PRK09952 shikimate transporter 99.4 4.4E-12 9.5E-17 131.6 17.2 181 14-216 249-432 (438)
118 PRK03699 putative transporter; 99.4 2.6E-12 5.6E-17 131.3 14.9 173 15-214 205-377 (394)
119 TIGR00899 2A0120 sugar efflux 99.4 5.1E-12 1.1E-16 127.6 16.6 172 17-215 201-372 (375)
120 TIGR01299 synapt_SV2 synaptic 99.4 4.1E-12 8.9E-17 138.2 15.8 135 55-216 599-733 (742)
121 KOG0253 Synaptic vesicle trans 99.4 1.2E-10 2.6E-15 112.8 23.6 167 17-211 79-245 (528)
122 PRK03893 putative sialic acid 99.4 1E-11 2.2E-16 130.7 16.8 150 33-206 293-442 (496)
123 TIGR00883 2A0106 metabolite-pr 99.4 3.6E-12 7.9E-17 128.9 12.9 167 15-205 219-389 (394)
124 COG2211 MelB Na+/melibiose sym 99.4 1.5E-10 3.4E-15 117.9 24.1 184 14-215 11-205 (467)
125 TIGR00880 2_A_01_02 Multidrug 99.4 2.4E-12 5.2E-17 110.2 9.5 134 57-216 4-137 (141)
126 PRK09874 drug efflux system pr 99.4 1E-11 2.2E-16 127.1 15.7 170 21-216 225-397 (408)
127 TIGR00889 2A0110 nucleoside tr 99.4 9E-12 2E-16 128.4 15.0 178 18-218 211-403 (418)
128 PRK09705 cynX putative cyanate 99.4 2.5E-11 5.5E-16 124.1 18.1 176 15-218 205-382 (393)
129 PRK12382 putative transporter; 99.4 1.1E-11 2.4E-16 126.5 14.8 163 25-216 226-388 (392)
130 PRK11273 glpT sn-glycerol-3-ph 99.4 1.1E-11 2.4E-16 129.2 15.0 177 15-215 253-433 (452)
131 PRK03545 putative arabinose tr 99.3 4.3E-11 9.3E-16 122.1 18.5 173 17-216 207-379 (390)
132 PRK10489 enterobactin exporter 99.3 1.9E-11 4.1E-16 125.8 15.6 159 31-215 239-397 (417)
133 PRK11551 putative 3-hydroxyphe 99.3 3E-11 6.5E-16 123.7 16.4 168 20-214 225-393 (406)
134 PRK11663 regulatory protein Uh 99.3 2.4E-11 5.2E-16 125.9 15.8 177 16-216 244-423 (434)
135 PRK09528 lacY galactoside perm 99.3 6E-12 1.3E-16 129.8 11.2 169 21-215 229-401 (420)
136 TIGR00902 2A0127 phenyl propri 99.3 5.2E-11 1.1E-15 121.3 17.8 169 15-212 205-374 (382)
137 PRK03633 putative MFS family t 99.3 5.1E-11 1.1E-15 121.2 17.4 159 25-213 210-368 (381)
138 TIGR00891 2A0112 putative sial 99.3 2.4E-11 5.2E-16 123.7 14.7 156 21-201 244-400 (405)
139 TIGR00893 2A0114 d-galactonate 99.3 4.7E-11 1E-15 120.5 16.4 177 15-214 215-396 (399)
140 TIGR00892 2A0113 monocarboxyla 99.3 1.9E-11 4E-16 127.6 13.8 173 16-214 242-418 (455)
141 COG2271 UhpC Sugar phosphate p 99.3 1.9E-11 4E-16 121.0 11.9 179 15-216 252-433 (448)
142 PLN00028 nitrate transmembrane 99.3 9.4E-11 2E-15 123.0 17.0 173 17-217 254-433 (476)
143 TIGR00897 2A0118 polyol permea 99.3 1.4E-10 3E-15 119.0 17.8 177 15-215 222-399 (402)
144 COG2814 AraJ Arabinose efflux 99.3 2.3E-10 5E-15 114.4 18.4 178 14-218 210-387 (394)
145 PRK15075 citrate-proton sympor 99.3 8E-11 1.7E-15 122.0 15.9 151 22-195 245-397 (434)
146 PRK11010 ampG muropeptide tran 99.3 1.5E-10 3.3E-15 121.8 17.7 180 17-218 224-404 (491)
147 TIGR00879 SP MFS transporter, 99.3 1.1E-10 2.3E-15 121.2 16.2 170 31-216 300-469 (481)
148 PF03209 PUCC: PUCC protein; 99.3 2.4E-09 5.2E-14 106.5 24.7 334 42-476 6-349 (403)
149 PRK10406 alpha-ketoglutarate t 99.3 1.7E-10 3.6E-15 119.6 17.0 167 25-215 253-422 (432)
150 PF11700 ATG22: Vacuole efflux 99.2 2E-10 4.4E-15 119.6 17.1 185 14-216 280-467 (477)
151 COG2223 NarK Nitrate/nitrite t 99.2 1.4E-10 3.1E-15 114.9 14.3 184 14-217 217-401 (417)
152 PRK10504 putative transporter; 99.2 2.8E-10 6.1E-15 119.1 16.6 158 15-195 261-418 (471)
153 KOG4686 Predicted sugar transp 99.2 2.4E-10 5.2E-15 107.0 14.0 180 9-216 258-442 (459)
154 KOG4686 Predicted sugar transp 99.2 2E-10 4.4E-15 107.5 12.7 155 17-193 43-199 (459)
155 TIGR00712 glpT glycerol-3-phos 99.2 1.6E-10 3.6E-15 119.8 13.6 179 16-218 252-434 (438)
156 KOG0252 Inorganic phosphate tr 99.2 3.5E-10 7.5E-15 112.8 14.0 140 47-205 80-234 (538)
157 PRK12307 putative sialic acid 99.2 7E-10 1.5E-14 114.3 17.0 146 30-200 246-391 (426)
158 PRK11128 putative 3-phenylprop 99.2 9E-10 2E-14 112.1 17.1 167 15-210 205-372 (382)
159 PRK15402 multidrug efflux syst 99.2 1.9E-09 4.2E-14 110.5 19.5 171 17-209 217-387 (406)
160 PRK10091 MFS transport protein 99.2 7.6E-10 1.7E-14 112.6 16.3 169 17-212 201-371 (382)
161 TIGR02332 HpaX 4-hydroxyphenyl 99.2 4.8E-10 1E-14 115.4 14.5 164 16-205 243-409 (412)
162 TIGR02718 sider_RhtX_FptX side 99.2 1.2E-09 2.5E-14 111.5 17.3 175 16-211 209-385 (390)
163 TIGR00900 2A0121 H+ Antiporter 99.1 3.7E-10 8.1E-15 113.1 13.2 154 15-193 210-364 (365)
164 PF11700 ATG22: Vacuole efflux 99.1 9.2E-08 2E-12 99.8 30.9 183 15-216 4-247 (477)
165 TIGR00882 2A0105 oligosacchari 99.1 8.5E-10 1.8E-14 112.8 14.9 173 16-214 216-392 (396)
166 TIGR00792 gph sugar (Glycoside 99.1 6E-10 1.3E-14 115.2 13.7 161 15-195 222-383 (437)
167 PRK14995 methyl viologen resis 99.1 8E-10 1.7E-14 116.5 14.0 154 15-191 259-412 (495)
168 TIGR01272 gluP glucose/galacto 99.1 1.6E-09 3.5E-14 107.1 15.2 161 16-205 141-303 (310)
169 KOG2816 Predicted transporter 99.1 1.2E-08 2.5E-13 105.6 21.9 169 20-219 23-201 (463)
170 TIGR00894 2A0114euk Na(+)-depe 99.1 3.8E-09 8.2E-14 110.4 17.9 177 15-215 261-448 (465)
171 TIGR00711 efflux_EmrB drug res 99.1 1.1E-09 2.3E-14 114.9 13.2 156 15-192 255-410 (485)
172 PF05631 DUF791: Protein of un 99.1 5.4E-08 1.2E-12 95.5 23.5 154 43-219 61-218 (354)
173 PF05977 MFS_3: Transmembrane 99.1 2.9E-09 6.2E-14 112.2 15.6 172 17-214 220-391 (524)
174 PRK11902 ampG muropeptide tran 99.1 6.3E-09 1.4E-13 106.6 17.9 173 17-215 211-388 (402)
175 PRK10077 xylE D-xylose transpo 99.1 6.1E-09 1.3E-13 109.0 17.8 159 35-216 291-456 (479)
176 TIGR00895 2A0115 benzoate tran 99.0 1.8E-09 3.8E-14 109.5 13.2 146 17-189 252-397 (398)
177 PRK10133 L-fucose transporter; 99.0 4.8E-09 1.1E-13 108.8 16.1 166 18-212 261-428 (438)
178 TIGR00881 2A0104 phosphoglycer 99.0 1.7E-09 3.6E-14 108.8 12.1 162 15-199 216-379 (379)
179 PRK10213 nepI ribonucleoside t 99.0 1.1E-08 2.4E-13 104.7 18.2 166 16-209 217-383 (394)
180 TIGR00896 CynX cyanate transpo 99.0 2.9E-09 6.4E-14 107.0 13.5 153 15-194 197-350 (355)
181 TIGR01272 gluP glucose/galacto 99.0 3.3E-08 7.1E-13 97.8 20.2 85 123-213 9-109 (310)
182 TIGR00887 2A0109 phosphate:H+ 99.0 5E-09 1.1E-13 110.7 15.3 167 24-213 297-485 (502)
183 PRK11646 multidrug resistance 99.0 5.7E-09 1.2E-13 107.0 15.3 154 33-212 226-383 (400)
184 PRK15034 nitrate/nitrite trans 99.0 1E-08 2.2E-13 105.9 17.0 186 15-216 252-453 (462)
185 PRK10054 putative transporter; 99.0 4.7E-09 1E-13 107.4 14.6 170 15-210 206-377 (395)
186 TIGR00710 efflux_Bcr_CflA drug 99.0 1.5E-08 3.3E-13 102.5 18.1 162 17-201 208-370 (385)
187 PRK08633 2-acyl-glycerophospho 99.0 8.2E-09 1.8E-13 119.8 16.8 164 16-205 233-398 (1146)
188 PRK09848 glucuronide transport 99.0 6.2E-09 1.3E-13 108.3 13.6 163 15-195 228-391 (448)
189 COG2270 Permeases of the major 99.0 6.3E-09 1.4E-13 103.4 12.7 176 15-216 252-428 (438)
190 KOG2563 Permease of the major 99.0 3.5E-08 7.5E-13 98.7 17.4 136 35-191 64-201 (480)
191 PRK06814 acylglycerophosphoeth 98.9 1.1E-08 2.3E-13 118.9 15.1 183 15-205 225-410 (1140)
192 PF13347 MFS_2: MFS/sugar tran 98.9 3E-08 6.6E-13 102.5 16.8 162 15-195 225-387 (428)
193 TIGR00901 2A0125 AmpG-related 98.9 9.6E-09 2.1E-13 103.3 12.4 143 17-176 211-355 (356)
194 KOG2325 Predicted transporter/ 98.9 5.6E-08 1.2E-12 99.6 17.8 189 7-218 26-230 (488)
195 TIGR00898 2A0119 cation transp 98.9 1.5E-08 3.2E-13 107.1 14.1 144 44-216 351-494 (505)
196 PRK11195 lysophospholipid tran 98.9 5E-08 1.1E-12 99.8 17.4 160 28-214 218-377 (393)
197 TIGR00903 2A0129 major facilit 98.9 5.8E-08 1.3E-12 98.4 16.2 167 15-214 192-362 (368)
198 PF07690 MFS_1: Major Facilita 98.9 1E-08 2.3E-13 102.1 10.7 144 17-183 208-352 (352)
199 KOG0253 Synaptic vesicle trans 98.8 4.9E-08 1.1E-12 95.0 13.8 174 15-216 326-518 (528)
200 KOG2504 Monocarboxylate transp 98.8 1.2E-08 2.5E-13 107.2 10.4 176 15-217 298-476 (509)
201 PRK10473 multidrug efflux syst 98.8 1.6E-07 3.4E-12 95.8 17.1 70 33-103 221-290 (392)
202 PRK09669 putative symporter Ya 98.8 5.8E-08 1.3E-12 100.9 13.7 161 16-195 230-391 (444)
203 PRK11102 bicyclomycin/multidru 98.8 2.6E-07 5.7E-12 93.4 18.1 148 17-187 196-344 (377)
204 PF03137 OATP: Organic Anion T 98.8 9.2E-10 2E-14 116.3 -0.5 191 22-223 10-256 (539)
205 PRK11043 putative transporter; 98.8 5.1E-07 1.1E-11 92.3 19.0 153 23-198 211-363 (401)
206 PF03825 Nuc_H_symport: Nucleo 98.8 3.4E-07 7.4E-12 93.6 17.3 179 17-216 209-394 (400)
207 COG2270 Permeases of the major 98.7 1.6E-06 3.5E-11 86.5 20.6 128 35-185 35-170 (438)
208 KOG3626 Organic anion transpor 98.7 1.1E-06 2.3E-11 94.0 20.5 202 14-222 95-348 (735)
209 KOG2532 Permease of the major 98.7 1.9E-07 4.2E-12 96.9 13.7 177 15-216 258-446 (466)
210 PRK10429 melibiose:sodium symp 98.7 3.3E-07 7.2E-12 96.1 15.5 165 15-195 231-396 (473)
211 COG2807 CynX Cyanate permease 98.7 7E-07 1.5E-11 87.3 16.2 170 15-210 208-378 (395)
212 TIGR00885 fucP L-fucose:H+ sym 98.7 3.3E-07 7.3E-12 94.3 14.9 163 17-208 234-403 (410)
213 TIGR00886 2A0108 nitrite extru 98.7 1.4E-07 3E-12 95.0 11.4 139 17-179 227-366 (366)
214 PF03092 BT1: BT1 family; Int 98.7 9.3E-07 2E-11 91.5 17.6 162 37-218 11-176 (433)
215 KOG0569 Permease of the major 98.6 2.2E-06 4.7E-11 88.6 17.7 187 13-218 267-455 (485)
216 PRK11652 emrD multidrug resist 98.6 2.4E-06 5.1E-11 87.2 17.7 140 35-198 227-366 (394)
217 PF01770 Folate_carrier: Reduc 98.6 1.7E-05 3.8E-10 80.0 22.8 156 36-218 24-183 (412)
218 COG2211 MelB Na+/melibiose sym 98.5 2.6E-06 5.7E-11 87.3 15.2 159 15-191 236-395 (467)
219 PF06813 Nodulin-like: Nodulin 98.5 1.1E-05 2.3E-10 76.7 17.8 160 35-215 21-180 (250)
220 TIGR00924 yjdL_sub1_fam amino 98.5 1.4E-06 3.1E-11 91.3 13.0 184 17-216 274-467 (475)
221 PRK11462 putative transporter; 98.5 2.2E-06 4.8E-11 89.5 14.2 161 16-195 229-390 (460)
222 PF01306 LacY_symp: LacY proto 98.5 2.4E-06 5.2E-11 86.6 13.6 176 15-216 220-399 (412)
223 KOG4332 Predicted sugar transp 98.4 1.9E-06 4E-11 80.6 10.3 93 40-153 61-154 (454)
224 COG0477 ProP Permeases of the 98.3 1.2E-05 2.5E-10 77.1 14.8 146 36-206 23-174 (338)
225 PRK15403 multidrug efflux syst 98.3 2.2E-05 4.7E-10 80.9 16.3 170 15-207 218-387 (413)
226 PF03209 PUCC: PUCC protein; 98.3 3.9E-05 8.5E-10 76.8 16.9 173 20-214 213-395 (403)
227 KOG3098 Uncharacterized conser 98.3 0.00035 7.6E-09 71.8 24.2 103 57-186 56-158 (461)
228 KOG3764 Vesicular amine transp 98.2 1.3E-06 2.8E-11 86.3 5.5 180 17-216 272-453 (464)
229 PF12832 MFS_1_like: MFS_1 lik 98.2 8.5E-06 1.8E-10 62.6 8.9 68 23-92 8-75 (77)
230 PRK09584 tppB putative tripept 98.2 1.8E-05 3.8E-10 83.7 13.7 175 24-215 281-477 (500)
231 COG0738 FucP Fucose permease [ 98.2 2.3E-05 4.9E-10 77.9 13.4 166 17-211 238-403 (422)
232 TIGR00788 fbt folate/biopterin 98.2 5.9E-06 1.3E-10 86.5 9.6 137 42-194 279-415 (468)
233 TIGR01301 GPH_sucrose GPH fami 98.2 3.1E-05 6.7E-10 80.7 14.7 204 10-218 253-472 (477)
234 PRK10207 dipeptide/tripeptide 98.1 1.9E-05 4.1E-10 83.1 11.9 176 24-215 278-474 (489)
235 PF06963 FPN1: Ferroportin1 (F 98.1 0.0092 2E-07 61.4 29.6 192 17-212 4-195 (432)
236 KOG3762 Predicted transporter 98.1 1.4E-05 3E-10 81.9 8.6 172 20-218 376-548 (618)
237 PF06609 TRI12: Fungal trichot 98.0 0.00022 4.9E-09 75.8 16.1 150 14-187 309-462 (599)
238 KOG2533 Permease of the major 97.8 0.0001 2.2E-09 77.0 10.6 167 15-205 273-444 (495)
239 KOG3762 Predicted transporter 97.8 0.0012 2.5E-08 68.1 17.4 70 388-472 434-503 (618)
240 PF00083 Sugar_tr: Sugar (and 97.8 1.7E-07 3.7E-12 97.4 -10.8 181 16-216 253-435 (451)
241 KOG0254 Predicted transporter 97.7 0.00077 1.7E-08 71.5 15.3 152 13-179 292-444 (513)
242 PF02487 CLN3: CLN3 protein; 97.7 0.024 5.2E-07 57.5 24.7 51 426-476 333-383 (402)
243 KOG1330 Sugar transporter/spin 97.6 0.00022 4.8E-09 72.1 9.3 136 312-477 35-170 (493)
244 TIGR00769 AAA ADP/ATP carrier 97.6 0.046 1E-06 56.9 26.0 161 15-190 7-189 (472)
245 TIGR00805 oat sodium-independe 97.6 0.0012 2.5E-08 71.9 14.1 170 16-192 331-581 (633)
246 TIGR00880 2_A_01_02 Multidrug 97.5 0.00058 1.2E-08 57.6 9.0 96 356-477 5-100 (141)
247 KOG3574 Acetyl-CoA transporter 97.5 0.062 1.3E-06 53.5 22.8 156 13-186 29-189 (510)
248 PF05978 UNC-93: Ion channel r 97.4 0.0051 1.1E-07 54.1 13.7 111 49-186 35-145 (156)
249 KOG0252 Inorganic phosphate tr 97.3 0.00029 6.4E-09 71.2 5.6 180 15-216 304-497 (538)
250 PRK15462 dipeptide/tripeptide 96.9 0.027 5.8E-07 59.2 15.6 120 53-189 310-437 (493)
251 KOG2615 Permease of the major 96.9 0.008 1.7E-07 59.7 10.6 151 16-191 261-413 (451)
252 PTZ00207 hypothetical protein; 96.9 0.0042 9.1E-08 66.4 9.5 177 15-220 353-555 (591)
253 PF06779 DUF1228: Protein of u 96.9 0.0093 2E-07 46.4 8.8 66 37-103 13-78 (85)
254 KOG2816 Predicted transporter 96.9 0.0061 1.3E-07 63.4 10.0 126 38-190 264-390 (463)
255 TIGR00926 2A1704 Peptide:H+ sy 96.8 0.17 3.7E-06 55.2 21.3 311 49-413 18-338 (654)
256 KOG0637 Sucrose transporter an 96.7 0.0014 3E-08 66.4 3.6 166 15-189 32-202 (498)
257 PRK03612 spermidine synthase; 96.6 0.11 2.4E-06 55.1 17.5 161 25-207 24-187 (521)
258 TIGR00806 rfc RFC reduced fola 96.6 0.034 7.4E-07 57.6 12.8 99 352-477 65-163 (511)
259 KOG0255 Synaptic vesicle trans 96.5 0.055 1.2E-06 57.4 14.6 145 16-191 323-467 (521)
260 KOG2563 Permease of the major 96.4 0.029 6.2E-07 57.1 10.7 183 17-223 268-456 (480)
261 KOG3626 Organic anion transpor 95.9 0.24 5.2E-06 53.9 15.5 169 17-191 394-648 (735)
262 PF13000 Acatn: Acetyl-coenzym 95.6 3.4 7.4E-05 43.1 22.3 51 428-478 405-455 (544)
263 PF03137 OATP: Organic Anion T 95.4 0.004 8.7E-08 66.2 0.0 168 19-192 309-514 (539)
264 PF06963 FPN1: Ferroportin1 (F 94.7 0.87 1.9E-05 47.0 14.5 135 36-187 279-413 (432)
265 COG3104 PTR2 Dipeptide/tripept 93.5 0.66 1.4E-05 48.1 10.7 143 54-212 327-482 (498)
266 KOG4332 Predicted sugar transp 92.7 0.64 1.4E-05 44.3 8.5 148 45-212 274-426 (454)
267 PF03219 TLC: TLC ATP/ADP tran 92.6 12 0.00026 39.4 18.8 162 15-191 24-205 (491)
268 PF05978 UNC-93: Ion channel r 91.5 8 0.00017 33.9 13.7 73 387-475 64-136 (156)
269 KOG2325 Predicted transporter/ 89.4 0.38 8.3E-06 50.0 4.0 196 14-216 261-474 (488)
270 KOG0637 Sucrose transporter an 89.1 2.8 6.1E-05 43.1 9.7 157 308-477 33-192 (498)
271 PF03092 BT1: BT1 family; Int 88.6 0.44 9.5E-06 49.4 3.9 158 43-216 244-412 (433)
272 KOG3810 Micronutrient transpor 87.7 2.1 4.6E-05 42.5 7.5 48 426-473 324-371 (433)
273 KOG3098 Uncharacterized conser 87.1 12 0.00025 39.1 13.0 108 62-180 290-402 (461)
274 TIGR00939 2a57 Equilibrative N 86.3 3.8 8.2E-05 42.5 9.1 155 15-185 269-427 (437)
275 PF02487 CLN3: CLN3 protein; 85.6 7 0.00015 39.9 10.4 61 123-189 334-394 (402)
276 PF06813 Nodulin-like: Nodulin 71.7 11 0.00023 36.0 6.3 81 388-477 64-144 (250)
277 KOG3880 Predicted small molecu 70.9 63 0.0014 31.9 11.1 115 16-151 13-142 (409)
278 KOG3097 Predicted membrane pro 70.4 68 0.0015 31.9 11.3 115 13-155 27-141 (390)
279 KOG1479 Nucleoside transporter 68.0 19 0.00041 36.7 7.4 94 51-157 282-376 (406)
280 COG5336 Uncharacterized protei 65.4 26 0.00056 28.4 6.1 39 54-92 45-83 (116)
281 PF01891 CbiM: Cobalt uptake s 64.6 73 0.0016 29.2 10.2 98 355-459 105-204 (205)
282 TIGR00769 AAA ADP/ATP carrier 63.4 2E+02 0.0043 30.2 16.9 70 134-208 276-345 (472)
283 COG3202 ATP/ADP translocase [E 61.6 2.2E+02 0.0047 30.0 22.1 162 15-191 27-209 (509)
284 PF01770 Folate_carrier: Reduc 59.8 68 0.0015 33.0 9.7 90 49-156 283-372 (412)
285 KOG1479 Nucleoside transporter 54.7 2.6E+02 0.0055 28.7 21.2 46 427-472 342-387 (406)
286 KOG2082 K+/Cl- cotransporter K 53.7 1E+02 0.0022 34.0 9.9 85 83-184 497-593 (1075)
287 PF01733 Nucleoside_tran: Nucl 50.7 4 8.6E-05 40.2 -0.8 118 56-186 187-304 (309)
288 PF00854 PTR2: POT family; In 50.3 40 0.00086 33.9 6.4 80 391-476 2-84 (372)
289 COG0477 ProP Permeases of the 49.7 89 0.0019 28.8 8.5 45 427-471 93-138 (338)
290 TIGR00939 2a57 Equilibrative N 49.4 3.2E+02 0.007 28.3 27.4 50 427-476 371-420 (437)
291 KOG4830 Predicted sugar transp 48.8 21 0.00045 34.2 3.6 64 21-86 23-95 (412)
292 PF05631 DUF791: Protein of un 48.2 3E+02 0.0065 27.7 16.4 164 15-185 119-301 (354)
293 PRK07331 cobalt transport prot 47.6 2.1E+02 0.0045 28.4 10.6 101 356-461 107-220 (322)
294 PF09527 ATPase_gene1: Putativ 47.5 85 0.0018 21.9 5.9 35 59-93 8-42 (55)
295 PRK08319 cobalt transport prot 42.3 2.6E+02 0.0056 26.1 10.0 100 356-462 109-213 (224)
296 TIGR01667 YCCS_YHJK integral m 40.4 2.3E+02 0.0049 31.5 10.7 48 76-141 51-98 (701)
297 TIGR01666 YCCS hypothetical me 36.1 2.6E+02 0.0056 31.1 10.2 49 76-142 51-99 (704)
298 KOG3810 Micronutrient transpor 33.4 2.4E+02 0.0052 28.6 8.3 98 52-173 272-369 (433)
299 PF13000 Acatn: Acetyl-coenzym 33.2 2.6E+02 0.0055 29.7 8.9 63 124-192 405-467 (544)
300 PF07672 MFS_Mycoplasma: Mycop 32.6 3.4E+02 0.0074 26.1 9.1 44 123-170 203-246 (267)
301 PF03219 TLC: TLC ATP/ADP tran 31.9 6.4E+02 0.014 26.7 16.3 72 134-210 292-363 (491)
302 PRK11909 cobalt transport prot 30.3 4.6E+02 0.01 24.5 10.3 36 428-463 183-219 (230)
303 TIGR02230 ATPase_gene1 F0F1-AT 27.3 2E+02 0.0044 23.1 5.6 29 62-90 53-81 (100)
304 KOG3574 Acetyl-CoA transporter 25.6 2.4E+02 0.0053 28.9 7.0 59 133-197 378-436 (510)
305 PF12832 MFS_1_like: MFS_1 lik 24.7 1.2E+02 0.0027 22.8 3.9 30 350-379 36-65 (77)
306 PRK06265 cobalt transport prot 23.8 5.6E+02 0.012 23.3 9.6 97 356-461 101-197 (199)
307 PF07672 MFS_Mycoplasma: Mycop 23.3 6.7E+02 0.015 24.1 12.2 54 164-219 4-64 (267)
308 KOG1237 H+/oligopeptide sympor 22.0 1.4E+02 0.003 32.2 5.0 63 122-190 456-518 (571)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-45 Score=385.39 Aligned_cols=463 Identities=41% Similarity=0.691 Sum_probs=416.7
Q ss_pred ccCCcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHH
Q 011743 10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG 89 (478)
Q Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~ 89 (478)
.++.|+++.+++..+.+|++++|++...+..|+..++|.+...+.-....+.......++++++++|.|+||++++.++.
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s 111 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS 111 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 55778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCC----CCCcc--ccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhh
Q 011743 90 TLEVLSLVMLTIQAYSKSLHPPDC----GKSSC--LKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKA 163 (478)
Q Consensus 90 ~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~ 163 (478)
.+..+|.+++......+.+.|+.+ +.+.| +.......++.++.+.++|.|+.+|+..++.+||+++.++++++.
T Consensus 112 ~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~ 191 (571)
T KOG1237|consen 112 LISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKG 191 (571)
T ss_pred HHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhC
Confidence 999999999988888888888653 22122 334466788899999999999999999999999999888888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHh
Q 011743 164 LASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKN 243 (478)
Q Consensus 164 r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (478)
+.+.|+|+|+..++|..++-.+..++.++.+|.+.|.++.+++++++++++.+.+.++..+|.+++..++.+++..+.++
T Consensus 192 ~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~k 271 (571)
T KOG1237|consen 192 IPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAFK 271 (571)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHHH
Confidence 89999999999999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCchhhhhhhhhhccCcccccCCCCccchhhhhccCCCCC----CCCCCcccccchhhHHHHHHHHHHHHHHHH
Q 011743 244 RKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDS----TAAAPWRVCTVTQVEEVKILARMMPILAST 319 (478)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 319 (478)
++...+..++++.. ........++.+.++++|+++++.+++ ...+||+.++.++|||.|...+.++++.+.
T Consensus 272 ~~~~~~~~~~~~~~-----~~~~~~~~~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~lct~~~Vee~K~~lr~~Pi~~~~ 346 (571)
T KOG1237|consen 272 RKAVVSLDPEELYY-----DCTDSVAIEGTKPFRFLDKAALKTSDDLKDGLDANPWRLCTVTQVEEVKAVLRLLPIWLTT 346 (571)
T ss_pred HhccCCCcchhccc-----cccccccccCCcccchhhHhhccCCcccccccccCCccCCCceehhhhhhhhhhhHHHHHH
Confidence 88877665443311 111112334467889999999987753 345789999999999999999999999999
Q ss_pred HHHHHhHhhcchhhhhhhcccCCCCCC-cccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHH
Q 011743 320 IIMNTCLAQLQTLSVTQGAYMDPRLGS-IKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLV 398 (478)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~ 398 (478)
++++.++.|+.+.+++|+..||+.+++ +.+|++.++.+..+...+..|+.++...|+.||.++++.++++..|+.+|++
T Consensus 347 i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~~~~~~t~lqrig~G~~ 426 (571)
T KOG1237|consen 347 IIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTGNPFGITPLQRIGIGLV 426 (571)
T ss_pred HHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcCCCCCCChhheeeccch
Confidence 999999999999999999999999988 9999999999999999999999999999999999887668999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccC--CCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHhhcc
Q 011743 399 LSVISMTIAGFVEVKRRNAFNQ--SPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 476 (478)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~~lg 476 (478)
+..++|...+.+|..|.+...+ +.++++|.+|+++||+++|++|.+..++.+|+.|+++|++||+.+++++.+..++|
T Consensus 427 ~si~sm~~aa~vE~krl~~~~~~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G 506 (571)
T KOG1237|consen 427 LSILSMAVAGIVEAKRLKTAVSLLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVG 506 (571)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998887754 22357999999999999999999999999999999999999999999999999988
Q ss_pred C
Q 011743 477 T 477 (478)
Q Consensus 477 ~ 477 (478)
+
T Consensus 507 ~ 507 (571)
T KOG1237|consen 507 N 507 (571)
T ss_pred H
Confidence 6
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=5.6e-45 Score=364.02 Aligned_cols=415 Identities=18% Similarity=0.304 Sum_probs=331.8
Q ss_pred cccCCcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccC----CchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHH
Q 011743 9 KQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMH----FDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFAT 84 (478)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg----~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~ 84 (478)
..-++||.++.++..|++||++|||+...+..|+..+++ +|++++..+.+.|....++.++++||++||++|+||+
T Consensus 15 ~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t 94 (498)
T COG3104 15 KFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT 94 (498)
T ss_pred ccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 334689999999999999999999999999999999888 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhh
Q 011743 85 CLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKAL 164 (478)
Q Consensus 85 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r 164 (478)
+..|.++.++|.++++.++ ..+...++++++++++|.|+++|+++++++|++|++||| |
T Consensus 95 I~lGail~~iGh~~L~~~~-----------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr----r 153 (498)
T COG3104 95 IVLGAILMAIGHLVLAISS-----------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR----R 153 (498)
T ss_pred HHHHHHHHHHHHHHHhccc-----------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc----c
Confidence 9999999999999998763 125677899999999999999999999999999999987 8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCcceeecCC--CCCch------hHHHHH
Q 011743 165 ASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQP--GESPL------VRVAQV 236 (478)
Q Consensus 165 ~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~ 236 (478)
+.+++++|+++|+|+.++|.+++++.+.+||+..|.++++-+.++++.++++++....... +..+. .....+
T Consensus 154 D~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (498)
T COG3104 154 DGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGL 233 (498)
T ss_pred CCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHH
Confidence 8999999999999999999999999999999999999999999999999998876655432 11111 111111
Q ss_pred HHHHHHhc-CCCCCCCchhhhhhhhhhccCcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHHH
Q 011743 237 IVVAIKNR-KLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPI 315 (478)
Q Consensus 237 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~ 315 (478)
+....+-- ...+..+....+ .......- .. .+-.... . .++.+ +||||++..+++
T Consensus 234 ~~~~~~~~~~~~l~~~~~~~~-~~~~~i~~---------~~-~~~~~~~---------~---~~~~~-~er~r~~~~~~L 289 (498)
T COG3104 234 VVMILAALLTLLLNQNTFSGV-LLVISILI---------AI-IYFAEAF---------R---SPKVF-DERRRLLAAIPL 289 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHH---------HH-HHHHHHh---------c---cCccH-HHHHHHHHHHHH
Confidence 11111100 000000000000 00000000 00 0000000 0 01223 679999999999
Q ss_pred HHHHHHHHHhHhhcchhhhhhh-cccCCCCCCcccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHH
Q 011743 316 LASTIIMNTCLAQLQTLSVTQG-AYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVG 394 (478)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~ 394 (478)
++...+||+++.|..+.+..++ ++.+++..|+.+|+++++.+|++.+++++|+.+++++|+.++.. +++...++.
T Consensus 290 fl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~----~ps~~~KFa 365 (498)
T COG3104 290 FLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNK----QPSTPIKFA 365 (498)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCC----CCCcchHHH
Confidence 9999999999999999887777 45677866699999999999999999999999999999877752 479999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHhh
Q 011743 395 VGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCH 474 (478)
Q Consensus 395 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~~ 474 (478)
+|+++++++++.........- +++ +..|.+|+++.|+++++||.+++|.+++++++.+|+++++..|+.|.+.+.
T Consensus 366 lGl~l~g~~fl~l~~~~~~~~---~~~--~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a 440 (498)
T COG3104 366 LGLILAGLGFLILLLAGIWFG---GPS--GLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVA 440 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhhc---CCC--CCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 999999999988887744311 111 247999999999999999999999999999999999999999999999988
Q ss_pred ccC
Q 011743 475 LAT 477 (478)
Q Consensus 475 lg~ 477 (478)
.|+
T Consensus 441 ~~~ 443 (498)
T COG3104 441 AGQ 443 (498)
T ss_pred HHH
Confidence 875
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=3.6e-40 Score=344.79 Aligned_cols=410 Identities=13% Similarity=0.195 Sum_probs=310.6
Q ss_pred cccCCcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHH
Q 011743 9 KQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVF 88 (478)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~ 88 (478)
..++|||.++.+++.+++||++||++..++++|+++++|++..+++++.+.+....++.++++|+++||++||||+++++
T Consensus 8 ~~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g 87 (489)
T PRK10207 8 GLLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLG 87 (489)
T ss_pred chhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHH
Confidence 44679999999999999999999999999999999999999999999999999999999999999999978999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHH
Q 011743 89 GTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYF 168 (478)
Q Consensus 89 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~ 168 (478)
.++++++++++.++.. ....++++|+++++|.|+++|+..++++|++|+++++ |++++
T Consensus 88 ~~~~~~g~~~~~~~~~------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~----~~~~~ 145 (489)
T PRK10207 88 AIVLAIGYFMTGMSLL------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPR----LDGAF 145 (489)
T ss_pred HHHHHHHHHHHHHhcc------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchh----hhcch
Confidence 9999999999887641 2334668899999999999999999999999987633 68899
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCcceeec--CCCCCchhHHHHHH--------H
Q 011743 169 NFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQ--QPGESPLVRVAQVI--------V 238 (478)
Q Consensus 169 ~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--------~ 238 (478)
+++|++.|+|..+||.+++++.++.|||+.|+++++.++++++.+...++.+++. +|++++.+.....+ .
T Consensus 146 ~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~ 225 (489)
T PRK10207 146 TLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMI 225 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998776666666666666554432 22222222111100 0
Q ss_pred HHHHhcCCCCCCCchhhhhhhhhhccCcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHH
Q 011743 239 VAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILAS 318 (478)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 318 (478)
....... +.............. . . ...+..... ..++ .++++.+..+.++..
T Consensus 226 ~~~~~~~-~~~~~~~~~~~~~~~--i----~-----~~~f~~~~~---------------~~~~-~~r~r~~~~~~l~~~ 277 (489)
T PRK10207 226 FVCAWLM-HNVEVANLVLIVLSI--V----V-----TIIFFREAF---------------KLDK-TGRNKMFVAFVLMLE 277 (489)
T ss_pred HHHHHHH-hhhhHHHHHHHHHHH--H----H-----HHHHHHHHh---------------cCCH-HHHHHHHHHHHHHHH
Confidence 0000000 000000000000000 0 0 000000000 0001 335556666777788
Q ss_pred HHHHHHhHhhcchhhhhhhc-ccCCCCCCcccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHH
Q 011743 319 TIIMNTCLAQLQTLSVTQGA-YMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGL 397 (478)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~ 397 (478)
..++|.++.|..+.+..+.. +.+.+..|+.++++.++++|++.+++..|+.+++++++.+|.. .+++..++.+|+
T Consensus 278 ~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~----~~~~~~k~~~G~ 353 (489)
T PRK10207 278 AVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGK----DLSMPMKFTLGM 353 (489)
T ss_pred HHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCC----CCCcHHHHHHHH
Confidence 99999999999877766665 5677777888899999999999999999999987777666542 369999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHhhccC
Q 011743 398 VLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 477 (478)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~~lg~ 477 (478)
++.+++++.....+....+ .+. ..+.||+++.+++.++||.+.+|+.++++++.+|++++|.+||++++.+++|+
T Consensus 354 ~l~~~~~~~~~~~~~~~~~--~~~---~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~ 428 (489)
T PRK10207 354 FLCSLGFLTAAAAGMWFAD--AQG---LTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAF 428 (489)
T ss_pred HHHHHHHHHHHHHHHhhcC--CCC---ccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 9999998776654322111 111 26789999999999999999999999999999999999999999999988875
No 4
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=4.4e-39 Score=332.53 Aligned_cols=407 Identities=15% Similarity=0.192 Sum_probs=309.1
Q ss_pred cCCcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHH
Q 011743 11 KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGT 90 (478)
Q Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~ 90 (478)
.+|||.++.+++.+++|++++|++..+++.|+++++|+++.+++.+.+.+....+++++++|+++||++||||++.++.+
T Consensus 5 ~~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~i 84 (493)
T PRK15462 5 ASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGAL 84 (493)
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHH
Confidence 45899999999999999999999999999999999999999999999999999999999999999993399999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHH
Q 011743 91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF 170 (478)
Q Consensus 91 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~ 170 (478)
+.+++.+++.... .+...++++..+..+|.|..+|+.+++++|++|+++++ |++++++
T Consensus 85 l~~lg~lll~~~~------------------~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~----R~sgf~i 142 (493)
T PRK15462 85 LMAIGHVVLGASE------------------IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPR----RDGGFSL 142 (493)
T ss_pred HHHHHHHHHHHhh------------------cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCcc----ccceehH
Confidence 9999987665432 12233556666777889999999999999999987544 8999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCcceeecCC-CCCchh--HHHH----HH-HHH--
Q 011743 171 YLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQP-GESPLV--RVAQ----VI-VVA-- 240 (478)
Q Consensus 171 ~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~----~~-~~~-- 240 (478)
+|...|+|+.++|.+++++.+.+||++.|.++++.++++++.++..++.+.+... ++++.. +... .+ ...
T Consensus 143 ~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (493)
T PRK15462 143 MYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVA 222 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999988999999999888777777777776655443211 111111 0000 00 000
Q ss_pred ---HHhcCCCCCCCchhhhhhhhhhccCcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHHHHH
Q 011743 241 ---IKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILA 317 (478)
Q Consensus 241 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~ 317 (478)
..............+.... ....- -+-+..+. ..+.+||||+...+.++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~---~~~~~~~~-----------------~~~~~er~r~~~~~~l~~ 275 (493)
T PRK15462 223 TPALITVLFWKEWSVYALIVAT-------IIGLG---VLAKIYRK-----------------AENQKQRKELGLIVTLTF 275 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-------HHHHH---HHHHHHHh-----------------cCCHHHHhhHHHHHHHHH
Confidence 0000000000000000000 00000 00000000 011367889889999999
Q ss_pred HHHHHHHhHhhcchhhhhhh-cccCCCCCCcccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHH
Q 011743 318 STIIMNTCLAQLQTLSVTQG-AYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVG 396 (478)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G 396 (478)
...+||+.+.|.++.+...+ .++|+++.|+.+|+++++++|++.+++++|+...++.++.||.. .++...|+.+|
T Consensus 276 ~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~----~~s~~~Kfa~g 351 (493)
T PRK15462 276 FSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNR----TVRIWGKFALG 351 (493)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCC----CCCcHHHHHHH
Confidence 99999999999988766555 57899999999999999999999999999999998887765432 35899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHh-hc
Q 011743 397 LVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHC-HL 475 (478)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~-~l 475 (478)
++++++++++..+.... .+++| .++.+|++..++++++||.+.+|..++.+++.+|++.+|+.||+|.+.. .+
T Consensus 352 ~~~~g~~f~~l~~~~~~----~~~~~--~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~ 425 (493)
T PRK15462 352 LGLMSAGFCILTLSARW----SAMYG--HSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAI 425 (493)
T ss_pred HHHHHHHHHHHHHHHhh----cCCCC--CcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 99999999888776422 11122 3789999999999999999999999999999999999999999998744 45
Q ss_pred c
Q 011743 476 A 476 (478)
Q Consensus 476 g 476 (478)
|
T Consensus 426 ~ 426 (493)
T PRK15462 426 A 426 (493)
T ss_pred H
Confidence 4
No 5
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=2e-38 Score=331.20 Aligned_cols=413 Identities=14% Similarity=0.182 Sum_probs=310.4
Q ss_pred cccCCcchhHHHHHHHHHHHHHHHHhHHHHHHHcccc--cCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHH
Q 011743 9 KQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNE--MHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCL 86 (478)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~--lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~ 86 (478)
...++||.++.+++.+++|++++|++.++++.|++++ +|++..+++.+.+.+.+...++++++|+++||++||||++.
T Consensus 4 ~~~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~ 83 (475)
T TIGR00924 4 TFFGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMV 83 (475)
T ss_pred cccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHH
Confidence 4467999999999999999999999999999999988 99999999999999999999999999999999679999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhh
Q 011743 87 VFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALAS 166 (478)
Q Consensus 87 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~ 166 (478)
++.++.+++.+++..+. +...+++++.+.|+|.|+..|+..++++|++|++++ .+|++
T Consensus 84 ~~~~~~~~g~~~~~~~~-------------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~---~~r~~ 141 (475)
T TIGR00924 84 LGGIVLMLGHFMLAMSI-------------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDM---PRRDG 141 (475)
T ss_pred HHHHHHHHHHHHHHhcc-------------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCc---ccccc
Confidence 99999999998887653 456777899999999999999999999999987652 12788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhH----HHH-------
Q 011743 167 YFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVR----VAQ------- 235 (478)
Q Consensus 167 ~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~------- 235 (478)
+++++|.+.|+|..+||.+++++.+..||++.|+++++.++++++.+...++.+++.++++++..+ ..+
T Consensus 142 ~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (475)
T TIGR00924 142 GFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLA 221 (475)
T ss_pred eehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHH
Confidence 999999999999999999999999888999999998877777776666666554433322211110 000
Q ss_pred HHHHHHHhcCCCCCCCchhhhhhhhhhccCcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHHH
Q 011743 236 VIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPI 315 (478)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~ 315 (478)
.+....+...................- ... . .+.+.. ..| +.+ .+++++....+.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~------~~~~~~---------~~~----~~~-~~~~~~~~~~l~l 277 (475)
T TIGR00924 222 ALALVFFCAWLMHHVVIANILLMTVTL---AVI-I------FFFRLA---------FKP----RLD-AVARNKMYAYIVL 277 (475)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHH---HHH-H------HHHHHH---------Hhc----cCC-HHHHhHHHHHHHH
Confidence 000001100000000000000000000 000 0 000000 000 001 1334444567888
Q ss_pred HHHHHHHHHhHhhcchhhhh-hhcccCCCCCCcccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHH
Q 011743 316 LASTIIMNTCLAQLQTLSVT-QGAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVG 394 (478)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~ 394 (478)
++...++|+.+.|..+.+.. +..++|.+.+++.+|+++++++|++.+++.+|+.++++.++.||.. ..+...|+.
T Consensus 278 ~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~----~~~~~~k~~ 353 (475)
T TIGR00924 278 FLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGK----DPTTPLKFT 353 (475)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCC----CCCcHHHHH
Confidence 99999999999999886544 4456788888889999999999999999999999987665555421 257778899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHhh
Q 011743 395 VGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCH 474 (478)
Q Consensus 395 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~~ 474 (478)
+|+++.++++...++.... .++. .+.+.||+++++++.++||.+..|..++++++.+|+++||+++|++.+...
T Consensus 354 ~G~~l~~~~~~~~~~~~~~----~~~~--~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~ 427 (475)
T TIGR00924 354 LGMLFCGASFLTFAASIWF----ADAG--GLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQA 427 (475)
T ss_pred HHHHHHHHHHHHHHHHHhh----cCCC--CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 9999999999988876321 1111 237999999999999999999999999999999999999999999999888
Q ss_pred ccC
Q 011743 475 LAT 477 (478)
Q Consensus 475 lg~ 477 (478)
+|+
T Consensus 428 ~g~ 430 (475)
T TIGR00924 428 MGS 430 (475)
T ss_pred HHH
Confidence 774
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=7e-37 Score=321.38 Aligned_cols=404 Identities=15% Similarity=0.226 Sum_probs=303.9
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHH
Q 011743 12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL 91 (478)
Q Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 91 (478)
++||.++.+++.+++|++++|++..+++.|+++++|++..+++++.+.+.......++++|+++||++|||+++.++.++
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~ 97 (500)
T PRK09584 18 KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIV 97 (500)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999888888888889999999944999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHH
Q 011743 92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (478)
Q Consensus 92 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~ 171 (478)
.+++.+++.++.+ +...++++++++++|.|...|+..++++|++|+++++ |+++++++
T Consensus 98 ~~ig~~l~~~~~~------------------~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~----~~~~~~~~ 155 (500)
T PRK09584 98 LAIGYALVAWSGH------------------DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPR----LDGAFTMY 155 (500)
T ss_pred HHHHHHHHHHhcc------------------cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchh----hhhcchHH
Confidence 9999888876531 4456778899999999999999999999999876533 56789999
Q ss_pred HHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCcceeec--CCCCCchhHHH------HHHHHHHHh
Q 011743 172 LFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQ--QPGESPLVRVA------QVIVVAIKN 243 (478)
Q Consensus 172 ~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~------~~~~~~~~~ 243 (478)
|.+.|+|..+||.+++++.+..|||+.|+++++.++++++.++..++.+++. ++++++.+... .+.......
T Consensus 156 ~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (500)
T PRK09584 156 YMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIA 235 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999989999999998877777766655554433332 22222222111 111111110
Q ss_pred c-CCCCCCCchhhhhhhhhhccCcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHH
Q 011743 244 R-KLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIM 322 (478)
Q Consensus 244 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~ 322 (478)
. .+..++.........+.. ...+.... .+. .+.+|+++....+.+++..++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~------------~~~-~~~~~~~~~~~~~~~~~~~i~f 288 (500)
T PRK09584 236 TWLLHNQEIARMALGVVALG--------------IVVIFGKE------------AFA-MKGAARRKMIVAFILMLEAIIF 288 (500)
T ss_pred HHHHhcchHHHHHHHHHHHH--------------HHHHHHHH------------Hhh-cCHHHHHHHHHHHHHHHHHHHH
Confidence 0 000110000000000000 00000000 000 0124566666677788888999
Q ss_pred HHhHhhcchhhhhhhc-ccCCCCCCcccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHH
Q 011743 323 NTCLAQLQTLSVTQGA-YMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSV 401 (478)
Q Consensus 323 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~ 401 (478)
|+.+.|.++.+..+.. +.+++..|+.+++++++++|++.+++.+|+.++++.++.+| +++.+++.+|+++++
T Consensus 289 ~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r-------~~~~~~~~~G~~l~~ 361 (500)
T PRK09584 289 FVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDR-------LPMPHKFAIGMVLCS 361 (500)
T ss_pred HHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcC-------CCcHHHHHHHHHHHH
Confidence 9999999998877664 46777778889999999999999999999999876655444 478899999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHhhccC
Q 011743 402 ISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 477 (478)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~~lg~ 477 (478)
++++...+.... .+++ ..++.+|+++++++.++||++++|..++++++.+|+++||++||++.+...+|+
T Consensus 362 l~f~~l~~~~~~----~~~~--~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~ 431 (500)
T PRK09584 362 GAFLVLPLGAKF----ANDA--GIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAA 431 (500)
T ss_pred HHHHHHHHHHHh----cCCC--CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 999988776432 1111 247888999999999999999999999999999999999999999987776653
No 7
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=100.00 E-value=1.5e-30 Score=277.66 Aligned_cols=339 Identities=23% Similarity=0.377 Sum_probs=283.8
Q ss_pred HHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccC
Q 011743 29 MGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSL 108 (478)
Q Consensus 29 ~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~ 108 (478)
++||++...+..|+.+.+|++..++..+...+....++.++++|+++|+++||+|++.++.++..+|..++.+++..+..
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~ 80 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSG 80 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999888875421111
Q ss_pred CCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHh
Q 011743 109 HPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVY 188 (478)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~ 188 (478)
. .......++++.+.++|.|+++|+..++.+|++++++ ++.|.+.|+++|+++|+|+.+++.+.++
T Consensus 81 ~-----------~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~---~~~~~s~F~~fY~~iNiGSlis~~i~~~ 146 (654)
T TIGR00926 81 H-----------PLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQ---LSLRSRFFSFFYFAINAGSLISTIITPI 146 (654)
T ss_pred c-----------chHHHHHHHHHHHHHhhccccccCchhhhHhhcCccc---hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 1134457788999999999999999999999998654 2338899999999999999999999999
Q ss_pred hhcc-------chhHHHHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhcCCCCCCCchhhhhhhhh
Q 011743 189 VFID-------QGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKI 261 (478)
Q Consensus 189 l~~~-------~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (478)
+.+. .+|+.+|.++++.++++++++...++.+++.+|++++..+..+++..+.+++......
T Consensus 147 l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~----------- 215 (654)
T TIGR00926 147 LRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSE----------- 215 (654)
T ss_pred HHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCc-----------
Confidence 9743 3699999999999999999998888888777777777777778877777654321110
Q ss_pred hccCcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhHhhcchhhhhhhcccC
Q 011743 262 ERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGAYMD 341 (478)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (478)
....+|+|++..+ ..+++++++|++++++.+++..+++|..+.|..+.+..|+.+++
T Consensus 216 -----------~~~~~~ld~a~~~------------~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~~m~ 272 (654)
T TIGR00926 216 -----------HWPLHWLDYAKDK------------HDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATRMD 272 (654)
T ss_pred -----------ccchhHHHHhccc------------cccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHhc
Confidence 0013466654332 12356789999999999999999999999999999999998888
Q ss_pred CCCCCcccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 011743 342 PRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAF 418 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~ 418 (478)
.+++++.+|+++++.+|++.++++.|+.++.++|+.+|+.. .+++.+|+.+|++++++++++.+.+|..+....
T Consensus 273 ~~l~g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~~---~ls~l~k~~iG~~la~la~~va~~ve~~~~~~~ 346 (654)
T TIGR00926 273 GDVGGFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGT---RFTSLRKMAVGGLLAALSFFVAALVQLKVNPTL 346 (654)
T ss_pred CccCCEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcCC---CCChHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 88888889999999999999999999999888888777532 368999999999999999999999988766544
No 8
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.95 E-value=3.2e-27 Score=239.52 Aligned_cols=365 Identities=28% Similarity=0.459 Sum_probs=242.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhh
Q 011743 82 FATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGA 161 (478)
Q Consensus 82 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~ 161 (478)
+|++++|.++..+|.+++.++...+.. +.+.+...+++++.++++|.|+++|++.++++||+++++ +
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~~----------~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~---~ 67 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPSL----------PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDD---D 67 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSSC----------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTT---T
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcchh----------hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccc---h
Confidence 489999999999999998887643222 113356789999999999999999999999999999874 2
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCcceeec-CCCCCchhH-HHHHHHH
Q 011743 162 KALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQ-QPGESPLVR-VAQVIVV 239 (478)
Q Consensus 162 ~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~ 239 (478)
.+|.++|+++|+++|+|+.+++.+.+++.+++||.+.|.++.+.++++++.++..++.+++. ++.+++..+ ...+...
T Consensus 68 ~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 147 (372)
T PF00854_consen 68 SRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIKLVLVA 147 (372)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SHHHHHH
T ss_pred hhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHHHHHHH
Confidence 33889999999999999999999999999999999999999999999999999999988887 667777777 4444455
Q ss_pred HHHhcCCCCCCCchhhhhhhhhhccCcccccCCCCccchhhhhccCCCCCCCCCCccc-ccchhhHHHHHHHHHHHHHHH
Q 011743 240 AIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRV-CTVTQVEEVKILARMMPILAS 318 (478)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~l~~~~~ 318 (478)
..+++....+....+............. .+.....+......+.. ..|.. .+++++++.+.+.+.+..+.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~k~~~~~~~~~~~ 219 (372)
T PF00854_consen 148 AFKKRKLAVPKGSSWLDWALFQYSERSI-----FGIIVFIRAAVIFFPEI---FFWALFCQVQRVEELKALIRFLPIFLF 219 (372)
T ss_dssp HHHHHCCCH-HHHHHHHHHHHHHCCCCC-----CCCCCHHHHHHHHCCCH---HHHTTTSSTTTHHHCCHHHCHHHCCCH
T ss_pred HHHHhhcccccchHHHHHhhhhhhhhhh-----hhhhhhccchhhhhhhh---hhcccCCccceeeeeeeeeeccccCeE
Confidence 5566655554322222221111100000 00000000000000000 00100 223455677777777777777
Q ss_pred HHHHHHhHhhcchhhhhhhcccCCCCCC-cccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHH
Q 011743 319 TIIMNTCLAQLQTLSVTQGAYMDPRLGS-IKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGL 397 (478)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~ 397 (478)
...+..++.+.......+...++....+ +.+|+++++++|++.++++.|+.+++++|+.|+.. ..++..++.+|+
T Consensus 220 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~~~~----~~~~~~k~~~G~ 295 (372)
T PF00854_consen 220 WIFYWQMYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLRRGI----QPSPPQKFGIGM 295 (372)
T ss_dssp HHHHHHHCTCCHHHHHHCGGGTTT-SS------SGGGTTHHHHHCHHHHHHHHHHCCCTTTT----------HHHHHHH-
T ss_pred EEEeeehhhhhhhHHHHhccccccccccccccccchhhhHHHHHHHHHHHHHHHHHhHHhhhcc----cchhhhhhhHHH
Confidence 8888888888888888888888888887 89999999999999999999999999999988432 369999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHh
Q 011743 398 VLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHC 473 (478)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~ 473 (478)
+++.+++.....+|..+.+..++.+ ..+.+|+++.+++.+++|.+.+|...+.+++.+|+++.+..+|++....
T Consensus 296 ~~~~~~~~~~~~v~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a~~~~p~~m~~~~~~~~ 369 (372)
T PF00854_consen 296 VFAILAMFVAAIVEIRRLCYAQPCG--KVSPWWQVPMYIFWLIPEYFLSGTGESAAYEFAPSRAPSSMMGIWFALS 369 (372)
T ss_dssp HHHHHHHHTTTHHHH---HH----T--T--THHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTT-SSSSTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhcccccC--CCChhhHHHHHHHHHHHHHHhhHHHHHHHHHhhHHhhhHHHHHHHHHHh
Confidence 9999999999999876555444433 2455888899999999999999999996666666555555555555443
No 9
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.93 E-value=8e-24 Score=222.74 Aligned_cols=386 Identities=11% Similarity=0.005 Sum_probs=236.0
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
..+..+++..++...-.-.+..-+| .+.+++|.+..+.+++.+.+.++..++.++.|+++|| +|||+++.++.+++++
T Consensus 6 ~~~~~~~~~~~~~~ld~tiv~~a~p-~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~-~Grk~~l~~~~~~~~~ 83 (495)
T PRK14995 6 LTLVIIVLVYIPVAIDATVLHVAAP-TLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDR-IGFKRLLMLGGTLFGL 83 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 3444455555555554444444444 4467899999999999999999999999999999999 8999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCC-CCChhhhhhhhhHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFD-ENDPKGAKALASYFNFYLF 173 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~-~~~~~~~~~r~~~~~~~~~ 173 (478)
+.+++..+. +.+.++++|+++|+|.+...|...+.+.+.++ +++ |+++++++..
T Consensus 84 ~~~~~~~a~-------------------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~------r~~~~g~~~~ 138 (495)
T PRK14995 84 ASLAAAFSP-------------------TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQ------RNMALGVWAA 138 (495)
T ss_pred HHHHHHHcC-------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH------HHHHHHHHHH
Confidence 999988765 78889999999999999999988888877764 444 8999999999
Q ss_pred HHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHH--------HHHHHhcC
Q 011743 174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVI--------VVAIKNRK 245 (478)
Q Consensus 174 ~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 245 (478)
..++|..+||.+++++.+..|||+.|++...+.++.+++.....++.++++ .++.+...... ....++..
T Consensus 139 ~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~--~~~~d~~g~~~~~~~~~~l~~~~~~~~ 216 (495)
T PRK14995 139 VGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRR--DQPLNLGHALMLIVAILLLVYSAKTAL 216 (495)
T ss_pred HHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--CCCCChHhHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999988777666655544444322211 11111111110 11111100
Q ss_pred CCCCCCchhhhhhhhhhccCcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 011743 246 LSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTC 325 (478)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~ 325 (478)
+...+.......-.-... .. -.+.+.+ .+.+.|..+ .+-.++ +.+................
T Consensus 217 -~~~~~~~~~~~~~~~~~~----~l---~~f~~~e--------~~~~~p~~~--~~lf~~-~~~~~~~~~~~~~~~~~~~ 277 (495)
T PRK14995 217 -KGFLSLWVTSLTLLTGAL----LL---GLFIRTQ--------LAASRPMID--MRLFTH-RIILSGVVMAMTAMITLVG 277 (495)
T ss_pred -ccCCchHHHHHHHHHHHH----HH---HHHHHHH--------hcCCCCCcC--HHHhCC-cccHHHHHHHHHHHHHHHH
Confidence 000000000000000000 00 0000000 000111100 000111 1111111111111111111
Q ss_pred HhhcchhhhhhhcccCCCCCCcccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHH
Q 011743 326 LAQLQTLSVTQGAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMT 405 (478)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~ 405 (478)
...+.+.+.+...+.+ ....+.......+...+..++.+++.++. ++++.+..|.++.++++.
T Consensus 278 ~~~~~~~~lq~v~g~s------~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-----------g~~~~~~~g~~~~~~~~~ 340 (495)
T PRK14995 278 FELLMAQELQFVHGLS------PLEAGMFMLPVMVASGFSGPIAGILVSRL-----------GLRLVATGGMALSALSFY 340 (495)
T ss_pred HHHHHHHHHHHHcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------CchHHHHHHHHHHHHHHH
Confidence 1112233333333333 12234444445566677777777755443 233456778777777766
Q ss_pred HHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHhhccC
Q 011743 406 IAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 477 (478)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~~lg~ 477 (478)
....... ..+.+......++.|+|.++..++....+.+.+|++++|.+++++++.+++|+
T Consensus 341 ~l~~~~~------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~ 400 (495)
T PRK14995 341 GLAMTDF------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGA 400 (495)
T ss_pred HHHHhcC------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHH
Confidence 5544321 13445556678889999999999999999999999999999999999998875
No 10
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.93 E-value=1.9e-23 Score=214.09 Aligned_cols=175 Identities=14% Similarity=0.107 Sum_probs=156.5
Q ss_pred cCCcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHH
Q 011743 11 KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGT 90 (478)
Q Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~ 90 (478)
++.+| ++++...++.+.+++.+.++++.|+++++|.+..+.|.+.++..+...+..+++|+++|| +|||+++..+.+
T Consensus 8 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr-~g~k~~l~~~~~ 84 (400)
T PRK11646 8 RNLGK--YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADR-FGAKPMIVTGML 84 (400)
T ss_pred ccccH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHH-hCchHHHHHHHH
Confidence 44566 778899999999999999999999999999999999999999999999999999999999 899999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHH
Q 011743 91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF 170 (478)
Q Consensus 91 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~ 170 (478)
+.+++.+++...+ +.+.+++.|+++|++.+...|+..+++.|.+|+++ |++++++
T Consensus 85 ~~~~~~~~~~~~~-------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~a~~~ 139 (400)
T PRK11646 85 MRAAGFATMAIAH-------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ------RGRFFSL 139 (400)
T ss_pred HHHHHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHH
Confidence 9999988877653 67788899999999999999999999999999877 9999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 011743 171 YLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (478)
Q Consensus 171 ~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~ 214 (478)
.+...++|..+||.+++++. ..+|++.|++.++..++..+...
T Consensus 140 ~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~ 182 (400)
T PRK11646 140 LMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNA 182 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998 68999999988777665544433
No 11
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.92 E-value=1.8e-23 Score=208.82 Aligned_cols=346 Identities=17% Similarity=0.180 Sum_probs=225.8
Q ss_pred HHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHH
Q 011743 21 FVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLT 100 (478)
Q Consensus 21 ~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~ 100 (478)
++..++..++...+.+.++.++.+++|.+..+.+++.+++.+...++.++.|+++|| +||||++.++.++.+++..+..
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDR-FGRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHH-S-HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCeeeEeehhhhhhhHHHHhh
Confidence 455666777777677777768899999999999999999999999999999999999 8999999999999999955555
Q ss_pred HHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHH
Q 011743 101 IQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAM 180 (478)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 180 (478)
++. +.+.++++|++.|++.+...+...+++.|.+|+++ |++.+++.....++|..
T Consensus 81 ~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~g~~ 135 (352)
T PF07690_consen 81 FAS-------------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE------RGRAFGILSAGFSLGSI 135 (352)
T ss_dssp HHC-------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC------HHHHHHHHHHHHHHHHH
T ss_pred hhh-------------------hHHHHhhhccccccccccccccccccccccchhhh------hhhccccccchhhhhhh
Confidence 443 45589999999999999999999999999999988 99999999999999999
Q ss_pred HHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhcCCCCCCCchhhhhhhh
Q 011743 181 IGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINK 260 (478)
Q Consensus 181 ~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (478)
++|.+++++.+..+|++.|++.++..++..++.....++.++++++.++ .+++ +
T Consensus 136 ~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~--------------------~~~~---~--- 189 (352)
T PF07690_consen 136 LGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESP--------------------KESE---S--- 189 (352)
T ss_dssp HHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SS--------------------TTTT-------
T ss_pred cccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcccccccccc--------------------cccc---c---
Confidence 9999999999888999999999888877766433332211111110000 0000 0
Q ss_pred hhccCcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHH-HHHHHHHHHHhHhhcchhhhhhhcc
Q 011743 261 IERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMP-ILASTIIMNTCLAQLQTLSVTQGAY 339 (478)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (478)
.+..++.+ .+ +.+.+.+.++..+. .++....+.. ...+.+.+..+..+
T Consensus 190 ------------~~~~~~~~-------------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~ 238 (352)
T PF07690_consen 190 ------------KKPKPLKP-------------GF-----KSLFKNPVLWILLIAFFLFFFVFSG-FSFFLPLYLQEVLG 238 (352)
T ss_dssp -------------HHHCCCH--------------C-----THHHHHHCCHHHHHHHHHHHHHHHH-HHHHHHHHCCHHHH
T ss_pred ------------cccccccc-------------cc-----ccccccchhhhhhhhhhHHHHHHHH-hhcccchhhhhccC
Confidence 00000000 01 01112222221111 1111112222 22222222222222
Q ss_pred cCCCCCCcccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011743 340 MDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFN 419 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~ 419 (478)
.+ . ....+.+..+..+..++..++.+++.+++ ++.++..+......++.+........
T Consensus 239 ~~-~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~------ 296 (352)
T PF07690_consen 239 FS-G----PSQAGLLFSIFGIVGIIGSLLAGRLSDRF-----------GRRRRLLIAILLLILGALGLLLLPFS------ 296 (352)
T ss_dssp CC-T----HHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHHHHHCCSHHH------
T ss_pred CC-H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------CcHHHHHHHHHHHHHHHHHHHHHHHh------
Confidence 22 0 01122334444555555566666655443 22233444433333333333332111
Q ss_pred CCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHhhccC
Q 011743 420 QSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 477 (478)
Q Consensus 420 ~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~~lg~ 477 (478)
.+..+.....++.|++.+...|...+++.+.+|++++|+++|+.++..++|+
T Consensus 297 ------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~ 348 (352)
T PF07690_consen 297 ------SSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGG 348 (352)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHH
T ss_pred ------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 2456666678889999999999999999999999999999999999988774
No 12
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.92 E-value=1.7e-22 Score=202.64 Aligned_cols=346 Identities=11% Similarity=0.054 Sum_probs=226.9
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 011743 20 VFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVML 99 (478)
Q Consensus 20 l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~ 99 (478)
++...++..++.......++.|.. +++.+..+.+++.+++.++..++.++.|+++|| +||||++..+.++..++.++.
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr-~g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADR-YDRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHh-hchhHHHHHHHHHHHHHHHHH
Confidence 556667777777667777777765 589999999999999999999999999999999 899999999999888887776
Q ss_pred HHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHH
Q 011743 100 TIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAA 179 (478)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 179 (478)
......+ ..+.+.++++|++.|++.+...|+..+++.|.+|+++ |++.+++.....++|.
T Consensus 82 ~~~~~~~--------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~ 141 (365)
T TIGR00900 82 PFVALLG--------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ------LTQANSLSQAVRSLFY 141 (365)
T ss_pred HHHHHcC--------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HHHHHhHHHHHHHHHH
Confidence 6553100 1267888999999999999999999999999999876 8999999999999999
Q ss_pred HHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhcCCCCCCCchhhhhhh
Q 011743 180 MIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEIN 259 (478)
Q Consensus 180 ~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (478)
.++|.+++++.+..+|++.|++.++..+++.+..+..+.+.+++++ +++.. ++ ..+ +
T Consensus 142 ~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------------------~~-~~~-~ 198 (365)
T TIGR00900 142 IVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAASE-IQALS--------------------NA-VLR-D 198 (365)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCcc-ccccc--------------------hh-HHH-H
Confidence 9999999999888899999998877666555444433221111000 00000 00 000 0
Q ss_pred hhhccCcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHHH-HHHHHHHHHhHhhcchhhhhhhc
Q 011743 260 KIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPI-LASTIIMNTCLAQLQTLSVTQGA 338 (478)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~ 338 (478)
..+ .++ ...+.+.+...+.. +.....+........+.+..+..
T Consensus 199 ------------------~~~-------------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (365)
T TIGR00900 199 ------------------TRE-------------GIK-----FVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYL 242 (365)
T ss_pred ------------------HHh-------------HHH-----HHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 000 000 00001111111111 11111111111122233322212
Q ss_pred ccCCCCCCcccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 011743 339 YMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAF 418 (478)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~ 418 (478)
+.+ ....+.+.....+..++..++..++ .+|. ++.+.+..+.++.++++....+..
T Consensus 243 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~------- 298 (365)
T TIGR00900 243 GRG------STHYGWVLAAFGLGALLGALLLGLL----GRYF-------KRMALMTGAIFVIGLAILVVGLTP------- 298 (365)
T ss_pred CCc------hHHHHHHHHHHHHHHHHHHHHHHHH----HHHh-------chhHHHHHHHHHHHHHHHHHHhhc-------
Confidence 222 1122333444455555555555543 3332 333445566666666665555431
Q ss_pred cCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHhhccC
Q 011743 419 NQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 477 (478)
Q Consensus 419 ~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~~lg~ 477 (478)
.+.+......++.+++.+...|...++..+..|+++||+++|+.+...++|+
T Consensus 299 -------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 350 (365)
T TIGR00900 299 -------PNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAW 350 (365)
T ss_pred -------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 1255666778899999999999999999999999999999999999887764
No 13
>PRK12382 putative transporter; Provisional
Probab=99.91 E-value=2.1e-22 Score=205.54 Aligned_cols=179 Identities=12% Similarity=-0.031 Sum_probs=148.2
Q ss_pred cccCCcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHH
Q 011743 9 KQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVF 88 (478)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~ 88 (478)
.++...+.++.+.+..++...+.....+.+|.|+.+++|.|..+.|++.+.+.+...++.++.|+++|| +||||.+..+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr-~g~r~~l~~~ 87 (392)
T PRK12382 9 TRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQ-YGAKRSALQG 87 (392)
T ss_pred CCCcccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHh-hcchHHHHHH
Confidence 334456778888888888888888888999999999999999999999999999999999999999999 8999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHH
Q 011743 89 GTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYF 168 (478)
Q Consensus 89 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~ 168 (478)
.+...++.+........+.. ...+.+.++++|+++|++.+...+...+++.|.+|+++ |++++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~a~ 150 (392)
T PRK12382 88 MLACGLAGLAYLLAAILPVS-----------APFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKH------SGKVM 150 (392)
T ss_pred HHHHHHHHHHHHhhhccccc-----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc------cchhh
Confidence 88877765443322110000 01267888999999999999998988899999999887 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q 011743 169 NFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVA 205 (478)
Q Consensus 169 ~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~ 205 (478)
++...+.++|..++|.+++++.+..||++.+.+..+.
T Consensus 151 ~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~ 187 (392)
T PRK12382 151 SWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVL 187 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHH
Confidence 9999999999999999999998888999877655443
No 14
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.91 E-value=2.6e-22 Score=205.19 Aligned_cols=186 Identities=13% Similarity=-0.019 Sum_probs=154.1
Q ss_pred CCcccccccCCcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchh
Q 011743 3 DKVAGIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRF 82 (478)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~ 82 (478)
+.|++...|. .|.+..+++..++..++.....+.++.|+++++|.+..+.+++.+++.+...++.++.|+++|| +|||
T Consensus 4 ~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr-~g~r 81 (399)
T PRK05122 4 AEPALSGLRL-TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADT-LGPK 81 (399)
T ss_pred cchhhccCcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhc-cCCc
Confidence 3444444443 3557778888899999988889999999999999999999999999999999999999999999 8999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhh
Q 011743 83 ATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAK 162 (478)
Q Consensus 83 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~ 162 (478)
|++..+.++.+++.+.+..+..... +. ..+...+++.|+++|++.+...++..+++.|++|+++
T Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~-----~~------~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~----- 145 (399)
T PRK05122 82 KAVVFGLCGCALSGLLYLLAGLLAA-----WP------VLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH----- 145 (399)
T ss_pred chHHHHHHHHHHHHHHHHHhhhhhc-----cc------hhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh-----
Confidence 9999999988887766554321000 00 1146678999999999999999999999999999887
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 163 ALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATL 207 (478)
Q Consensus 163 ~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~ 207 (478)
|++++++.....++|..++|.+++++.+..||+..|++..+..+
T Consensus 146 -r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~ 189 (399)
T PRK05122 146 -TGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLAL 189 (399)
T ss_pred -hccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 89999998888899999999999999888999998887665543
No 15
>PRK10054 putative transporter; Provisional
Probab=99.91 E-value=3.1e-23 Score=212.10 Aligned_cols=177 Identities=13% Similarity=0.097 Sum_probs=156.1
Q ss_pred cCCcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHH
Q 011743 11 KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGT 90 (478)
Q Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~ 90 (478)
.+.+|+.+.+++..++...+++.+.++++.|+++++|++..++|++.+.+.+...+..++.|+++|| +|||+++.++.+
T Consensus 3 ~~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~g~k~~~~~~~~ 81 (395)
T PRK10054 3 LSLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADK-FDKKRYMLLAIT 81 (395)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcchhHHHHHH
Confidence 3567889999999999999999999999999999999999999999999999999999999999999 899999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHH
Q 011743 91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF 170 (478)
Q Consensus 91 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~ 170 (478)
+..++.+++...+ +.+.+++.+.+.+.+.+...+...+...|.+|+++ |++++++
T Consensus 82 ~~~~~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~ 136 (395)
T PRK10054 82 AFASGFIAIPLVN-------------------NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS------KTKIFSL 136 (395)
T ss_pred HHHHHHHHHHHHh-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH------HHHHHHH
Confidence 8888888777664 56667777888888878888888999999998777 8999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 011743 171 YLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (478)
Q Consensus 171 ~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~ 214 (478)
.+...++|..++|.+++++.+ .+|+..|++.+++.+++++...
T Consensus 137 ~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~ 179 (395)
T PRK10054 137 NYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQ 179 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999998875 7999999988877766654443
No 16
>PRK10504 putative transporter; Provisional
Probab=99.91 E-value=1.4e-22 Score=212.00 Aligned_cols=179 Identities=10% Similarity=0.036 Sum_probs=154.8
Q ss_pred CcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHH
Q 011743 13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE 92 (478)
Q Consensus 13 ~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 92 (478)
..|.+|.+.+..++..+..+.+.+.+|.|.+ ++|.++.+.+++.+.+.++..++.++.|+++|| +||||++..+.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~ 85 (471)
T PRK10504 8 VRWQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADR-VGVRNIFFTAIVLF 85 (471)
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHH
Confidence 3556788888888888888888888887765 699999999999999999999999999999999 89999999999888
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHH
Q 011743 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (478)
Q Consensus 93 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~ 172 (478)
+++.+++..+. +.+.++++|+++|++.+...|...+.+.|.+|+++ |++++++.+
T Consensus 86 ~~~~~~~~~~~-------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 140 (471)
T PRK10504 86 TLGSLFCALSG-------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQ------YMAAMTFVT 140 (471)
T ss_pred HHHHHHHHHhC-------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH------HHHHHHHHH
Confidence 88887766553 67788899999999999999999999999998766 889999999
Q ss_pred HHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCc
Q 011743 173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKP 218 (478)
Q Consensus 173 ~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~ 218 (478)
...++|..++|.+++.+.+..|||+.|++......++.+......+
T Consensus 141 ~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~ 186 (471)
T PRK10504 141 LPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMP 186 (471)
T ss_pred HHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999998899999999988776666655544433
No 17
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.91 E-value=9.6e-23 Score=213.56 Aligned_cols=386 Identities=10% Similarity=0.025 Sum_probs=235.7
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~ 96 (478)
...+++..++..+....+...+ +++.+++|.+..+.+++.+.+.++..++.++.|+++|| +|||+.+.++.++.+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAI-PTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKR-FGTRRLFLISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHH-hCcHHHHHHHHHHHHHHH
Confidence 3445555555555554444444 45567899999999999999999999999999999999 899999999999999998
Q ss_pred HHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 011743 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (478)
+++..+. +...++++|+++|++.+...+...+++.|.+|+++ |+++++++....+
T Consensus 82 ~~~~~~~-------------------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~ 136 (485)
T TIGR00711 82 LLCGVAP-------------------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK------RGRAMAIWGLTVL 136 (485)
T ss_pred HHHhCcC-------------------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHH
Confidence 8887654 67889999999999999999999999999999777 8999999999999
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHH--------HHHHhcCCCC
Q 011743 177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIV--------VAIKNRKLSL 248 (478)
Q Consensus 177 ~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 248 (478)
+|..++|.+++++.++.+||+.|++.+...++..+...+..++.++. +.++.+.....+. ....+.....
T Consensus 137 ~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~ 214 (485)
T TIGR00711 137 VAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPA--ASENFDFLGLLLLSVGLGSLLYGLSEGPERG 214 (485)
T ss_pred HHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcccc--ccCCCcHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 99999999999999989999999998777665555444433321111 1111111111110 0011111000
Q ss_pred CCCchhhhhhhhhhccCcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhHhh
Q 011743 249 PDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQ 328 (478)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~ 328 (478)
..++.+.......... .. ..+..+. .+ .+.|..+ .+...+++.....+..++....++.. ..
T Consensus 215 ~~~~~~~~~~~~~~~~----~~-----~~~~~~~-~~-----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 276 (485)
T TIGR00711 215 WFDSNEILILSITGLV----AI-----IAFVVWE-LT-----DDNPLVD--LRLFKYRNFTIGCVYMSLLGLGLYGS-FY 276 (485)
T ss_pred CCCchHHHHHHHHHHH----HH-----HHHHHHH-Hc-----CCCCccC--HHHHcCCChHHHHHHHHHHHHHHHHH-HH
Confidence 0000000000000000 00 0000000 00 0001000 00011111111111111111111111 11
Q ss_pred cchhhhhhhcccCCCCCCcccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 011743 329 LQTLSVTQGAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAG 408 (478)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~ 408 (478)
+.+.+.+...+.+ ....+.+.....+..++..++.+++.++. ++++.+.+|.++.+++..+..
T Consensus 277 ~~p~~~~~~~g~s------~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-----------~~~~~~~~g~~~~~~~~~~~~ 339 (485)
T TIGR00711 277 LLPLYLQQVLGYT------ALQAGLHILPVGLAPMLSSPIAGRMGDKI-----------DPRKLVTIGLILYAVGFYWRA 339 (485)
T ss_pred HHHHHHHHhcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----------CcHHHHHHHHHHHHHHHHHHh
Confidence 2222322222222 11233444555667777777777654433 334556778777777766555
Q ss_pred HHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHhhccC
Q 011743 409 FVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 477 (478)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~~lg~ 477 (478)
+.. . ...+.+.+....++.|++.++..++....+.+..|++++|.++|+.++.+.+|+
T Consensus 340 ~~~------~-----~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~ 397 (485)
T TIGR00711 340 FTF------T-----PDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGG 397 (485)
T ss_pred ccC------C-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHH
Confidence 210 0 013455666678899999999998888888899999999999999999988774
No 18
>PRK03545 putative arabinose transporter; Provisional
Probab=99.91 E-value=4.5e-22 Score=203.04 Aligned_cols=174 Identities=15% Similarity=0.052 Sum_probs=147.5
Q ss_pred cchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHH
Q 011743 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (478)
Q Consensus 14 ~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 93 (478)
+..++.+.+..++.....+...+.+| .+.+++|.++.+.+++.+.+.+...++.++.|+++|| +||||++..+.++..
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~ 85 (390)
T PRK03545 8 WLRVVTLALAAFIFNTTEFVPVGLLS-DIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSN-VERRKLLIGLFVLFI 85 (390)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHcchH-HHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CChHHHHHHHHHHHH
Confidence 44466666666665555453333444 5678999999999999999999999999999999999 899999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHH
Q 011743 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (478)
Q Consensus 94 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~ 173 (478)
++.+.+..++ +.+.+++.|+++|++.+...|...+++.|++|+++ |++++++...
T Consensus 86 ~~~~~~~~~~-------------------~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~g~~~~ 140 (390)
T PRK03545 86 ASHVLSALAW-------------------NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGK------KAQALSLLAT 140 (390)
T ss_pred HHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh------hhhHHHHHHH
Confidence 9988887764 78889999999999999999999999999999887 9999999999
Q ss_pred HHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 011743 174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (478)
Q Consensus 174 ~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~ 214 (478)
+.++|..++|.+++.+.+..|||+.|++.++..++..+...
T Consensus 141 ~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~ 181 (390)
T PRK03545 141 GTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLI 181 (390)
T ss_pred HHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888999999998877665544433
No 19
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.91 E-value=7e-22 Score=202.44 Aligned_cols=349 Identities=13% Similarity=0.041 Sum_probs=223.8
Q ss_pred cccCCcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHH
Q 011743 9 KQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVF 88 (478)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~ 88 (478)
..+.++..+...+...+++.+..+......+ .+.+++|.++.+.+++.+.+.++..++.++.|+++|| +||||++..+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~ 86 (406)
T PRK11551 9 SSSRLALTIGLCFLVALLEGLDLQSAGVAAP-RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADR-IGRKRILIVS 86 (406)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHH
Confidence 3343444455555666666666555544444 5567899999999999999999999999999999999 8999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHH
Q 011743 89 GTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYF 168 (478)
Q Consensus 89 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~ 168 (478)
.++..++.+++..+. +.+.+++.|++.|++.+...+...+++.|.+|+++ |++++
T Consensus 87 ~~~~~~~~~~~~~~~-------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~ 141 (406)
T PRK11551 87 VALFGLFSLATAQAW-------------------DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL------RGTAV 141 (406)
T ss_pred HHHHHHHHHHHHHhc-------------------cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH------HHHHH
Confidence 998888877776654 67888899999999999999999999999999877 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhcCCCC
Q 011743 169 NFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSL 248 (478)
Q Consensus 169 ~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (478)
++.+...++|..+++.+++.+.+..+|+..|++.+++.++..+......++.++.+++++ .
T Consensus 142 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-------------------~ 202 (406)
T PRK11551 142 SLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAG-------------------A 202 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccC-------------------c
Confidence 999999999999999999888888899999998776555444433332222111000000 0
Q ss_pred CCCchhhhhhhhhhccCcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhHhh
Q 011743 249 PDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQ 328 (478)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~ 328 (478)
.+.++.. +... . ++.+.++........+.....++.....
T Consensus 203 ~~~~~~~----------------------~~~~--~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (406)
T PRK11551 203 GKQRAPV----------------------LRAL--F----------------GEGRATATLLLWISYFFTLIVLYFLLNW 242 (406)
T ss_pred chhhhhh----------------------HHHH--h----------------hhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000 0000 0 0000111111111111212222222222
Q ss_pred cchhhhhhhcccCCCCCCcccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 011743 329 LQTLSVTQGAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAG 408 (478)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~ 408 (478)
. +.+. +..+.+. ...+.+.....+..++...+.+++.+++.+| +.+..+++..++++....
T Consensus 243 ~-p~~~-~~~g~s~------~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----------~~~~~~~~~~~~~~~~~~ 303 (406)
T PRK11551 243 L-PSLL-VGQGLSR------SQAGLVQIAFNIGGALGSLLIGALMDRLRPR-----------RVVLLIYAGILASLAALA 303 (406)
T ss_pred H-HHHH-HhCCCCh------hhhhHHHHHHHHHHHHHHHHHHHHHHHHhHH-----------HHHHHHHHHHHHHHHHHH
Confidence 1 2221 1122221 1234444555566667777777766654433 223444444444444333
Q ss_pred HHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHhhccC
Q 011743 409 FVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 477 (478)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~~lg~ 477 (478)
.. .+.+.+....++.+++.....+...+++.+..|+++||+++|+.+....+|+
T Consensus 304 ~~---------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~ 357 (406)
T PRK11551 304 AA---------------PSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGS 357 (406)
T ss_pred hc---------------CcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHH
Confidence 32 2344455566777887777888899999999999999999999998887764
No 20
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.90 E-value=1.6e-21 Score=198.70 Aligned_cols=174 Identities=14% Similarity=0.169 Sum_probs=148.9
Q ss_pred ccCCcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHH
Q 011743 10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG 89 (478)
Q Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~ 89 (478)
.+.+++......+..+...+..+.+.+..+ .+.+++|++..+.+++.+++.++..++.++.|+++|| +|||+++..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr-~g~r~~~~~~~ 84 (405)
T TIGR00891 7 TRAQWNAFSAAWLGWLLDAFDFFLVALVLA-EVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDR-YGRRLPMVTSI 84 (405)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHH
Confidence 345567777777888888877776555554 5678999999999999999999999999999999999 89999999999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHH
Q 011743 90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (478)
Q Consensus 90 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~ 169 (478)
++.+++.+++..+. +.+.+++.|++.|++.+...+...+++.|++|+++ |+++++
T Consensus 85 ~~~~~~~~~~~~~~-------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~~~ 139 (405)
T TIGR00891 85 VLFSAGTLACGFAP-------------------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL------RNKASG 139 (405)
T ss_pred HHHHHHHHHHHHhc-------------------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh------hhHHHH
Confidence 99999888877654 67888999999999999999999999999999887 999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccch--hHHHHHHHHHHHHHHH
Q 011743 170 FYLFATTLAAMIGVTAIVYVFIDQG--WWLGFLISSVATLIGL 210 (478)
Q Consensus 170 ~~~~~~~~g~~~~p~i~~~l~~~~~--~~~~f~i~~~~~~~~~ 210 (478)
+.....++|..+++.+++.+.+..+ |++.|++.++..++..
T Consensus 140 ~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~ 182 (405)
T TIGR00891 140 LLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL 182 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 9999999999999999998877665 9999987665544443
No 21
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.90 E-value=8.3e-22 Score=199.21 Aligned_cols=154 Identities=15% Similarity=0.126 Sum_probs=137.0
Q ss_pred HHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCC
Q 011743 37 SMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKS 116 (478)
Q Consensus 37 ~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 116 (478)
...+++.+++|++..+.+++.+++.++..++.++.|+++|| +|||+++..+.++..++..++..+.
T Consensus 15 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~~~~~~~~~~~------------- 80 (399)
T TIGR00893 15 FAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDR-FGARKTLAVFIVIWGVFTGLQAFAG------------- 80 (399)
T ss_pred HhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHh-cCcceeeHHHHHHHHHHHHHHHHHc-------------
Confidence 44455788999999999999999999999999999999999 8999999999999999888887764
Q ss_pred ccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccchhH
Q 011743 117 SCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWW 196 (478)
Q Consensus 117 ~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~ 196 (478)
+.+.++++|++.|++.+...+...+++.|.+|+++ |++.+++.....++|..++|.+++++.+..+|+
T Consensus 81 ------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 148 (399)
T TIGR00893 81 ------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE------RATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQ 148 (399)
T ss_pred ------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH------HHHHHHHHHHhchHHHHHHHHHHHHHHHhCCch
Confidence 77889999999999999999999999999999777 899999999999999999999999988889999
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 011743 197 LGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 197 ~~f~i~~~~~~~~~~~~~~~ 216 (478)
+.|++.++..++..+...+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~ 168 (399)
T TIGR00893 149 WAFIIEGVLGIIWGVLWLKF 168 (399)
T ss_pred HHHHHHHHHHHHHHHHhhhe
Confidence 99998877766555544443
No 22
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.89 E-value=4.7e-21 Score=194.25 Aligned_cols=344 Identities=13% Similarity=0.042 Sum_probs=225.3
Q ss_pred CcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHH
Q 011743 13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE 92 (478)
Q Consensus 13 ~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 92 (478)
+++.++.+....++...+.....+.+| ++.+++|.+..+.+++.+.+.++..++.++.|+++|| +||||.+..+.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~ 80 (385)
T TIGR00710 3 AKAFALLLGCLSILGPLGIDMYLPAFP-EIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDR-YGRRPVLLLGLFIF 80 (385)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHh-cCChHHHHHHHHHH
Confidence 345555566666666666665666655 4567899999999999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHH
Q 011743 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (478)
Q Consensus 93 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~ 172 (478)
.++.+++..+. +.+.+++.|++.|++.+...+...+++.|.+|+++ |++.+++.+
T Consensus 81 ~~~~~~~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 135 (385)
T TIGR00710 81 ALSSLGLALSN-------------------NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEE------LSRIYSILM 135 (385)
T ss_pred HHHHHHHHHHc-------------------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHH------HHHHHHHHH
Confidence 99888877664 67788899999999999999999999999999877 899999999
Q ss_pred HHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhcCCCCCCCc
Q 011743 173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNP 252 (478)
Q Consensus 173 ~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (478)
...++|..++|.+++++.+..+|+..|++.++..++..+..+...++.++.+. +++..+
T Consensus 136 ~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------------------- 194 (385)
T TIGR00710 136 PVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYEA-RIQIST-------------------- 194 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcc-cCCHHH--------------------
Confidence 99999999999999999888899999998877766555554443322111000 000000
Q ss_pred hhhhhhhhhhccCcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhHhhcchh
Q 011743 253 EELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTL 332 (478)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 332 (478)
..+ ++.+ ..++ ++.+............+..+....+.
T Consensus 195 --~~~-------------------~~~~---------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (385)
T TIGR00710 195 --YFE-------------------TFLL---------------------LLKS-KMFWGYALIYGASFGGFFAFFSGAPF 231 (385)
T ss_pred --HHH-------------------HHHH---------------------HHcC-chhHHHHHHHHHHHHHHHHHHHcChH
Confidence 000 0000 0001 11111111111111111111112222
Q ss_pred hhhhhcccCCCCCCcccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 011743 333 SVTQGAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEV 412 (478)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~ 412 (478)
+..+..+.+. ...+.+.....+..++..++.+++.+++ ++++.+..+.++.+++.........
T Consensus 232 ~~~~~~g~~~------~~~g~~~~~~~~~~~~~~~~~g~l~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (385)
T TIGR00710 232 VYIDIMGVSP------SVFGLLFALNIIAMIFGGFLNGRFIKKW-----------GAKSLLRMGLILFAVSAVLLEITAI 294 (385)
T ss_pred HHHHHcCCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222221 1223344445566666777666655443 3445566676666666655554321
Q ss_pred HHHhhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHhhc
Q 011743 413 KRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHL 475 (478)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~~l 475 (478)
. . ..+...+....++.+++.+...+.......+..| +.+|+++++.+.....
T Consensus 295 ~-----~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~ 346 (385)
T TIGR00710 295 L-----G-----LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLV 346 (385)
T ss_pred h-----c-----cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHH
Confidence 1 0 0123344555677889999999999999988887 5799999988876543
No 23
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.89 E-value=5.9e-21 Score=196.33 Aligned_cols=177 Identities=13% Similarity=0.058 Sum_probs=146.1
Q ss_pred CcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHH
Q 011743 13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE 92 (478)
Q Consensus 13 ~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 92 (478)
.++..+.+.+..+++..... ...+....+++++|++..+.+++.+++.++..++.++.|+++|| +||||++..++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~-~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRI-NIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAI-IGARRWIAGIMVLW 83 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhh-hHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHH-hChHHHHHHHHHHH
Confidence 45555555554444444333 33344558899999999999999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHH
Q 011743 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (478)
Q Consensus 93 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~ 172 (478)
.++.+++.++. +.+.++++|++.|++.+...|....++.|++|+++ |++.++++.
T Consensus 84 ~~~~~~~~~~~-------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------rg~~~~~~~ 138 (412)
T TIGR02332 84 GIASTATMFAT-------------------GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF------RARANALFM 138 (412)
T ss_pred HHHHHHHHHhc-------------------CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH------HHHHHHHHH
Confidence 99998888764 67889999999999999999999999999999877 899999999
Q ss_pred HHHHHHHHHHHHHHHhhhc------cchhHHHHHHHHHHHHHHHHHHHhc
Q 011743 173 FATTLAAMIGVTAIVYVFI------DQGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 173 ~~~~~g~~~~p~i~~~l~~------~~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
...++|..+++.+++++.+ ..|||+.|++.++..++..++.++.
T Consensus 139 ~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~ 188 (412)
T TIGR02332 139 IAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFW 188 (412)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999988763 3699999999877765554444443
No 24
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.89 E-value=5.6e-21 Score=195.37 Aligned_cols=175 Identities=13% Similarity=0.056 Sum_probs=150.6
Q ss_pred ccCCcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHH
Q 011743 10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG 89 (478)
Q Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~ 89 (478)
.|..|+.+..+.+..++.....|...+.++.+ .+++|.++.+.++..+.+.+...++.++.|+++|| +||||++..+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr-~grr~~~~~~~ 92 (394)
T PRK10213 15 TRPNWSAVFSVAFCVACLIIVEFLPVSLLTPM-AQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQA-TDRRYVVILFA 92 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCcHHHHHHHH
Confidence 34456666666666666666666666666654 56899999999999999999999999999999999 89999999999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHH
Q 011743 90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (478)
Q Consensus 90 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~ 169 (478)
++.+++.+++..+. +.+.+++.|+++|++.+...|...+++.|++|+++ |+++.+
T Consensus 93 ~~~~~~~~~~~~~~-------------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~------~~~a~~ 147 (394)
T PRK10213 93 VLLTLSCLLVSFAN-------------------SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRT------VPKALS 147 (394)
T ss_pred HHHHHHHHHHHHHC-------------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhH------HHHHHH
Confidence 99999888877654 78899999999999999999999999999999877 899999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHH
Q 011743 170 FYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLI 211 (478)
Q Consensus 170 ~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~ 211 (478)
+.....++|..++|.+++++.+.+|||+.|++.++..++..+
T Consensus 148 ~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l 189 (394)
T PRK10213 148 VIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIF 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999889999999988766554443
No 25
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.89 E-value=9.2e-21 Score=188.59 Aligned_cols=312 Identities=18% Similarity=0.141 Sum_probs=236.6
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 011743 18 TFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLV 97 (478)
Q Consensus 18 ~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~ 97 (478)
+.+....++..++.+...+.++.|.+ ++|.+..+.+++.+...+...++.++.|+++|| +||||.+.++.++..++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~-~g~r~~~~~~~~~~~~~~~ 79 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAE-DLGLSASQAGLIVSAFSLGYALGSLLAGYLSDR-FGRRRVLLLGLLLFALGSL 79 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hCCchhhHHHHHHHHHHHH
Confidence 34566777888888877788877764 679999999999999999999999999999999 8999999999999999988
Q ss_pred HHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHH
Q 011743 98 MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTL 177 (478)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 177 (478)
.+.... +.+.++++|++.|++.+...+...+++.|.+|+++ |++.+++.+...++
T Consensus 80 ~~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 134 (352)
T cd06174 80 LLAFAS-------------------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE------RGRALGLFSAGFGL 134 (352)
T ss_pred HHHHhc-------------------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc------hhhhhhHHHHHHHH
Confidence 887664 67888999999999999999999999999999887 99999999999999
Q ss_pred HHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhcCCCCCCCchhhhh
Q 011743 178 AAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYE 257 (478)
Q Consensus 178 g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (478)
|..++|.+++.+.+..+|++.|++.++..++..+...+..
T Consensus 135 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------- 174 (352)
T cd06174 135 GALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL---------------------------------------- 174 (352)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH----------------------------------------
Confidence 9999999999998888899999988877666655544321
Q ss_pred hhhhhccCcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhHhhcchhhhhhh
Q 011743 258 INKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQG 337 (478)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 337 (478)
|+.................+....+.+..+.
T Consensus 175 -------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (352)
T cd06174 175 -------------------------------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEV 205 (352)
T ss_pred -------------------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 0000011111111111111122222222221
Q ss_pred cccCCCCCCcccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhH-HHHHHHHHHHHHHHHHHHHHHHHHh
Q 011743 338 AYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQ-RVGVGLVLSVISMTIAGFVEVKRRN 416 (478)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~-~i~~G~~~~~~~~~~~~~~~~~~~~ 416 (478)
.+.+ ....+.+.....+..++..++..++.+|..+| + .+..+.++..+++......
T Consensus 206 ~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~i~~~~~~~~------ 262 (352)
T cd06174 206 LGLS------AAEAGLLLSLFGLGGILGALLGGLLSDRLGRR-----------RLLLLIGLLLAALGLLLLALA------ 262 (352)
T ss_pred cCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----------hHHHHHHHHHHHHHHHHHHHh------
Confidence 1222 22234555666777777777777765554333 3 5777888887777766665
Q ss_pred hccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHhhccC
Q 011743 417 AFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 477 (478)
Q Consensus 417 ~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~~lg~ 477 (478)
.+.+......++.+++.+...+...+++.+..|+++|++.+|+.+...++|+
T Consensus 263 ---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (352)
T cd06174 263 ---------PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGG 314 (352)
T ss_pred ---------ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHH
Confidence 2456677888999999999999999999999999999999999999888764
No 26
>TIGR00895 2A0115 benzoate transport.
Probab=99.89 E-value=8.4e-21 Score=192.72 Aligned_cols=173 Identities=16% Similarity=0.120 Sum_probs=141.2
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
+.....++..+....... ...+..+++.+++|.+..+.+++.+.+.++..++.++.|+++|| +|||+.+..+.++..+
T Consensus 17 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~ 94 (398)
T TIGR00895 17 RAIILSFLIMLMDGYDLA-AMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADR-IGRKRVLLWSILLFSV 94 (398)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHH-hhhHHHHHHHHHHHHH
Confidence 333333344444444433 34445556678899999999999999999999999999999999 8999999999998888
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (478)
+.+++.... +.+.+++.+++.|++.+...+...+++.|.+|+++ |++++++....
T Consensus 95 ~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~ 149 (398)
T TIGR00895 95 FTLLCALAT-------------------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF------RGTAVGLMFCG 149 (398)
T ss_pred HHHHHHHcc-------------------chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh------hchhHhhHhhH
Confidence 887776553 67778899999999999999999999999999877 89999999999
Q ss_pred HHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 011743 175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (478)
Q Consensus 175 ~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~ 214 (478)
.++|..++|.+++++.+..+|+..|++.++..++..++..
T Consensus 150 ~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 189 (398)
T TIGR00895 150 YPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLM 189 (398)
T ss_pred HHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHH
Confidence 9999999999999998888999999988655544444333
No 27
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.89 E-value=7e-21 Score=195.24 Aligned_cols=176 Identities=15% Similarity=0.123 Sum_probs=141.9
Q ss_pred CcchhHHHHHHHHHHH---HHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHH
Q 011743 13 GFRACTFVFVLSALEN---MGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG 89 (478)
Q Consensus 13 ~~~~~~~l~~~~~~~~---~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~ 89 (478)
+.+..+..+...+.+. ++...+.+.++. +.+++|.+..+.++..+.+.++..++.++.|.++|| +||||.+.++.
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr-~g~r~~l~~~~ 85 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDR-IGRRPVMLAGV 85 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHH
Confidence 3444444444444443 344444455554 557899999999999999999999999999999999 89999999999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHH
Q 011743 90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (478)
Q Consensus 90 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~ 169 (478)
.+..++.++...+. +.+.+++.|+++|++.+...+...+.+.|.+|+++ |.+..+
T Consensus 86 ~~~~~~~~~~~~~~-------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~~~ 140 (406)
T PRK15402 86 AFFILTCLAILLAQ-------------------SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD------AIKITA 140 (406)
T ss_pred HHHHHHHHHHHHHc-------------------cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH------HHHHHH
Confidence 99888888776654 67778899999999999888888999999998777 788888
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHh
Q 011743 170 FYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 170 ~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~ 215 (478)
+......+|..++|.+++++.+..+|++.|++.++..++..+....
T Consensus 141 ~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~ 186 (406)
T PRK15402 141 LMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWR 186 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHH
Confidence 8888888899999999999988889999999887776665554433
No 28
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.89 E-value=1.1e-20 Score=193.13 Aligned_cols=167 Identities=9% Similarity=0.036 Sum_probs=139.5
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
|..+.++...++..++...+...++.. .+++|.+..+.+++.+.+.+...++.|++|+++|| +||||++.++.+++++
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr-~grr~vl~~~~~~~~~ 80 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADS-FPKGRVMFIANGIKLL 80 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhc-cCCchhhHHHHHHHHH
Confidence 456677888888888766555555544 57899999999999999999999999999999999 8999999999999998
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (478)
+.+++..+. +. ++.|+++|++.+...|+..+++.|.+|+++ |+++.++....
T Consensus 81 ~~~~~~~~~-------------------~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~------~~~a~~~~~~~ 132 (393)
T PRK11195 81 GCLLMLFGI-------------------HP---LLAYGLVGIGAAAYSPAKYGILTELLPGEK------LVKANGWMEGS 132 (393)
T ss_pred HHHHHHHHH-------------------HH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHH
Confidence 887765543 32 678999999999999999999999999887 99999999999
Q ss_pred HHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 011743 175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA 212 (478)
Q Consensus 175 ~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~ 212 (478)
.++|..+||.++|++.+. .|+..+++.+...+++.+.
T Consensus 133 ~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~~~ 169 (393)
T PRK11195 133 TIAAILLGTVLGGALADP-HAEAALAVCALIYLLAALF 169 (393)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 999999999999999874 5777777666554444333
No 29
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.89 E-value=1.2e-20 Score=204.33 Aligned_cols=156 Identities=10% Similarity=0.078 Sum_probs=132.3
Q ss_pred HHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 011743 35 GISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCG 114 (478)
Q Consensus 35 ~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (478)
...+.+++.+++|++..+.+++.+++.++..++.+++|+++|| +|||+++++++++.+++.+++.++.
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR-~GRR~~lii~lil~~i~~ll~afa~----------- 253 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADK-LGRKQCLLICLSVNGFFAFFSSFVQ----------- 253 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHHh-----------
Confidence 4445567778899999999999999999999999999999999 8999999999999999888887764
Q ss_pred CCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhcc--
Q 011743 115 KSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID-- 192 (478)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~-- 192 (478)
+.+.++++|++.|+|.|+..|...++++|.+|++. |++.+++......+|..+++.++..+...
T Consensus 254 --------s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~------Rg~~~g~~~~~~~iG~ila~~la~~il~~~G 319 (742)
T TIGR01299 254 --------GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK------RGEHLSWLCMFWMIGGIYAAAMAWAIIPHYG 319 (742)
T ss_pred --------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 67889999999999999999999999999999877 89999999988999999998877655432
Q ss_pred -----------chhHHHHHHHHHHHHHHHHHHHhc
Q 011743 193 -----------QGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 193 -----------~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
.+||+.|++.++..++.++..++.
T Consensus 320 ~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~l 354 (742)
T TIGR01299 320 WSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFM 354 (742)
T ss_pred chhccccccccccHHHHHHHHHHHHHHHHHHHHHc
Confidence 368999888777666555444443
No 30
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.88 E-value=8.3e-21 Score=192.07 Aligned_cols=161 Identities=11% Similarity=0.041 Sum_probs=126.1
Q ss_pred HHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 011743 27 ENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSK 106 (478)
Q Consensus 27 ~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~ 106 (478)
++.......+.+ +.+++++|+++.+.|++.+.+.++..++.++.|+++|| +|||+++..+......+.. .....
T Consensus 3 ~~~~~~~~~~~l-p~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~-~~~~~--- 76 (368)
T TIGR00903 3 SQAIWVTFSPVL-SLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDR-AFKRWFLFGSLATFAAAAG-RLLDP--- 76 (368)
T ss_pred hhHHHHHHHhhH-HHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccchHHHHHHHHHHHHHHH-HHHHh---
Confidence 344444334444 45677999999999999999999999999999999999 8999887655544444432 22221
Q ss_pred cCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 011743 107 SLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAI 186 (478)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~ 186 (478)
.+...+++.|+++|+|.+.. ++..+.++|++|+++ |++++++...+.++|..+++.++
T Consensus 77 ---------------~~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~------r~~a~~~~~~~~~lG~~l~~~~~ 134 (368)
T TIGR00903 77 ---------------FNYEWLLACQLLAALGQPFL-LNAFAPAASQIREER------RDLVISLLSFAMYLGIIFALAAG 134 (368)
T ss_pred ---------------ccHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 26888999999999999864 455555689999877 99999999999999999999999
Q ss_pred HhhhccchhHHHHHHHHHHHHHHHHHHHh
Q 011743 187 VYVFIDQGWWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 187 ~~l~~~~~~~~~f~i~~~~~~~~~~~~~~ 215 (478)
+++.+..|||+.|++.++..++..++++.
T Consensus 135 ~~l~~~~gWr~~f~~~~~l~~~~~~~~~~ 163 (368)
T TIGR00903 135 LKIYTAGGLQLLIIPIAAVAAAGIILVLA 163 (368)
T ss_pred HHHHHccchHHHHHHHHHHHHHHHHHHHH
Confidence 99998899999999877766555544443
No 31
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.88 E-value=1.9e-20 Score=189.29 Aligned_cols=169 Identities=14% Similarity=0.057 Sum_probs=136.1
Q ss_pred HHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHH-HHHHHHHHHHHH
Q 011743 21 FVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLV-FGTLEVLSLVML 99 (478)
Q Consensus 21 ~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~-~~~~~~i~~~~~ 99 (478)
++..++..++.....+.++.|+++++|.+..+.|++.+++.+...+..++.|.++|| +||||.++. +..+..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr-~g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDY-QGDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCchHHHHHHHHHHHHHHHHH
Confidence 455777788888888999999999999999999999999999999999999999999 899887665 445555565665
Q ss_pred HHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhh--HHHHHHHHHHH
Q 011743 100 TIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALAS--YFNFYLFATTL 177 (478)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~--~~~~~~~~~~~ 177 (478)
..++ +.+.+++.|++++.+.+...|...++..|..|+++ |.+ ..+..+...++
T Consensus 82 ~~~~-------------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 136 (375)
T TIGR00899 82 AWNR-------------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRTG------REAVMFSSVMRAQISL 136 (375)
T ss_pred Hhcc-------------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc------hhhHHHHHHHHHHHhH
Confidence 5543 66777788888888878788888888888776544 443 35777778899
Q ss_pred HHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHh
Q 011743 178 AAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 178 g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~ 215 (478)
|..++|.+++++.+..+||+.|++.++..++..+..++
T Consensus 137 g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 137 AWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred HHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988899999999988876666555444
No 32
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.88 E-value=2.1e-20 Score=185.87 Aligned_cols=183 Identities=17% Similarity=0.090 Sum_probs=168.8
Q ss_pred cccCCcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHH
Q 011743 9 KQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVF 88 (478)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~ 88 (478)
..+..+..++.+.+..|.....-|.....+|. +.+++|.+..++|...+.|..+..++.|+...++|| +.||++++..
T Consensus 7 ~~~~~~~~l~aLa~~~F~igttEfv~~gLLp~-iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r-~~Rr~lLl~~ 84 (394)
T COG2814 7 ARKPMWLALLALALAAFAIGTTEFVPVGLLPP-IAADLGVSEGAAGQLITAYALGVALGAPLLALLTGR-LERRRLLLGL 84 (394)
T ss_pred ccccchHHHHHHHHHHHHHHhHHHHHHhchHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cchHHHHHHH
Confidence 44566788999999999999998888877765 567899999999999999999999999999999999 8999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHH
Q 011743 89 GTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYF 168 (478)
Q Consensus 89 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~ 168 (478)
+.+++++.++..++. +++.++++|++.|+..|.+.+...+..++..|+++ |+++.
T Consensus 85 l~lFi~~n~l~alAp-------------------~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~------~~~Ai 139 (394)
T COG2814 85 LALFIVSNLLSALAP-------------------SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK------RGRAL 139 (394)
T ss_pred HHHHHHHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------hhhHH
Confidence 999999999999986 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCc
Q 011743 169 NFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKP 218 (478)
Q Consensus 169 ~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~ 218 (478)
+....+..++..+|..++.++.+.+|||..|++.+++.+++.+..+...|
T Consensus 140 aiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 140 ALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999998888877777666544
No 33
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.88 E-value=7.4e-21 Score=194.70 Aligned_cols=175 Identities=15% Similarity=0.027 Sum_probs=146.6
Q ss_pred cchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhh-----HhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHH
Q 011743 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAG-----ASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVF 88 (478)
Q Consensus 14 ~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~-----~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~ 88 (478)
.|....+.+..++...++....++++.|.+ ++|.+..+ ++++.+++.+...++.++.|+++|| +|||+.+..+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~ 90 (408)
T PRK09874 13 KRNLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADR-KGRKIMLLRS 90 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hCcHHHHHHH
Confidence 455666778888888888888899998875 58888654 4888999999999999999999999 8999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHH
Q 011743 89 GTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYF 168 (478)
Q Consensus 89 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~ 168 (478)
.++.+++.+++.... +.+.+++.|++.|++.+ ..+...+++.|.+|+++ |+++.
T Consensus 91 ~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~------~~~~~ 144 (408)
T PRK09874 91 ALGMGIVMVLMGLAQ-------------------NIWQFLILRALLGLLGG-FVPNANALIATQVPRNK------SGWAL 144 (408)
T ss_pred HHHHHHHHHHHHHHh-------------------hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhh------hhHHH
Confidence 998888887776553 67888899999999855 45777788899998777 89999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhc
Q 011743 169 NFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 169 ~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
++.....++|..++|.+++.+.+..+|++.|++.++..++..+..++.
T Consensus 145 ~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (408)
T PRK09874 145 GTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFC 192 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888899999998887766665544443
No 34
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.88 E-value=5.1e-20 Score=188.04 Aligned_cols=175 Identities=11% Similarity=0.085 Sum_probs=145.8
Q ss_pred cCCcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHH
Q 011743 11 KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGT 90 (478)
Q Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~ 90 (478)
++.+|..+.+.....+..+......+.++. +.+++|.++.+.+++.+.+.++..++.++.|+++|| +||||.+.++.+
T Consensus 4 ~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~-i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr-~grr~~~~~~~~ 81 (394)
T PRK11652 4 QRNVNLLFMLVLLVAVGQMAQTIYVPAIAD-MARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDR-VGRRPVILVGMS 81 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhccHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHh-cCChHHHHHHHH
Confidence 345677777777777777766655555554 467899999999999999999999999999999999 899999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHH
Q 011743 91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF 170 (478)
Q Consensus 91 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~ 170 (478)
+.+++.+++..+. +.+.+++.|++.|++.+...+....+..|.+++++ ++++.++
T Consensus 82 ~~~~~~~~~~~~~-------------------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 136 (394)
T PRK11652 82 IFILGTLVALFAH-------------------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ------LRHANSL 136 (394)
T ss_pred HHHHHHHHHHHHc-------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH------HHHHHHH
Confidence 9998888776653 67888999999999998888877888888888766 7888898
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 011743 171 YLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA 212 (478)
Q Consensus 171 ~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~ 212 (478)
...+..++..++|.+++++.+..||++.|++.++..++..+.
T Consensus 137 ~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 178 (394)
T PRK11652 137 LNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFS 178 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHH
Confidence 888899999999999999988889999999877665544433
No 35
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.87 E-value=2e-20 Score=192.85 Aligned_cols=165 Identities=10% Similarity=0.091 Sum_probs=142.7
Q ss_pred CcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHH
Q 011743 13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE 92 (478)
Q Consensus 13 ~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 92 (478)
+++......+..+.+.+..+.. .++..++++++|.++.+.+++.+++.++..++.++.|+++|| +|||+++..+.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr-~g~r~~l~~~~~~~ 93 (426)
T PRK12307 16 QKNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADK-FGRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHH
Confidence 3455555566666666665544 444456778999999999999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHH
Q 011743 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (478)
Q Consensus 93 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~ 172 (478)
+++.+....+. +.+.++++|++.|+|.|...+...+++.|.+|+++ |+++.++..
T Consensus 94 ~~~~~~~~~~~-------------------~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~------r~~~~~~~~ 148 (426)
T PRK12307 94 SVGTGLSGLAS-------------------GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL------KSKASAFLV 148 (426)
T ss_pred HHHHHHHHHHh-------------------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH------hhHhhhHHH
Confidence 99998887765 78889999999999999999999999999999887 899999999
Q ss_pred HHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 011743 173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSV 204 (478)
Q Consensus 173 ~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~ 204 (478)
.+.++|..+++.+.+.+.+..+||+.|++...
T Consensus 149 ~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~ 180 (426)
T PRK12307 149 SGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLL 180 (426)
T ss_pred HHHhHHHHHHHHHHHHHcccCCHHHHHHHHHH
Confidence 99999999999999988888899999987544
No 36
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.87 E-value=6.3e-20 Score=187.52 Aligned_cols=190 Identities=14% Similarity=0.057 Sum_probs=138.4
Q ss_pred CCCcccccccCCcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHH-HHHHHhhHHHHHhhhccc
Q 011743 2 GDKVAGIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFG-STFLLCLVGGFISDTYLS 80 (478)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~G 80 (478)
-+.|..+..+...+..+.+++..++.+++.....+.++.|+++++|.+..+.|++.+.+.+ ...+.++.+|+ +|| +|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr-~g 79 (393)
T PRK15011 2 HNSPAVSSAKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDK-RG 79 (393)
T ss_pred CCCcccccchhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc-cc
Confidence 3556666667677778888888999999999999999999999999999999999876655 45555556666 999 89
Q ss_pred hhHHHH-HHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChh
Q 011743 81 RFATCL-VFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPK 159 (478)
Q Consensus 81 r~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~ 159 (478)
|||.++ .+.++.+++..+...+. +.+.+++.+.+.+...+...|...++..|+.++++
T Consensus 80 ~r~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 138 (393)
T PRK15011 80 DRKSLIVFCCLLGVLACTLFAWNR-------------------NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTG-- 138 (393)
T ss_pred chhHHHHHHHHHHHHHHHHHHHhh-------------------HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhcc--
Confidence 998754 45555556666555543 45555444444333334667777787777665443
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhc
Q 011743 160 GAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 160 ~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
|. .+...++...+.++|..++|.+++++.+..|||..|++.++..++..+..+..
T Consensus 139 -~~-~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 193 (393)
T PRK15011 139 -RE-AVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLF 193 (393)
T ss_pred -ch-HHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhh
Confidence 10 23444677888999999999999999988999999998887766555544443
No 37
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.87 E-value=2.6e-20 Score=187.70 Aligned_cols=166 Identities=11% Similarity=0.030 Sum_probs=135.6
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHH
Q 011743 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (478)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~ 95 (478)
..+...+..++.....+...+.+|.++++++|++..+.+++.+.+.++..++.++.|+++|| +||||.+.++.++..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~i~ 80 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDK-FGPRYTTTLSLLLLAIP 80 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHH
Confidence 35566667777777777777888878999999999999999999999999999999999999 89999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHH
Q 011743 96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT 175 (478)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (478)
.+++..+. .+.+.+++.|+++|++.+.. +...++++|++|+++ |+++.++.....
T Consensus 81 ~~~~~~~~------------------~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~------r~~~~~~~~~~~ 135 (366)
T TIGR00886 81 CLWAGLAV------------------QSYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPKKI------QGTALGLAAGWG 135 (366)
T ss_pred HHHHHHHh------------------hhHHHHHHHHHHHHHhchhh-HhHHHHHHHhcCHhh------hhHHHHHHHHHh
Confidence 88877653 15677889999999996654 556789999999877 899999988888
Q ss_pred HHHHHHHHHHHHhhhc----------cchhHHHHH-HHHHHHH
Q 011743 176 TLAAMIGVTAIVYVFI----------DQGWWLGFL-ISSVATL 207 (478)
Q Consensus 176 ~~g~~~~p~i~~~l~~----------~~~~~~~f~-i~~~~~~ 207 (478)
++|..+++.+++.+.. ..+||+.|+ +.++...
T Consensus 136 ~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 178 (366)
T TIGR00886 136 NMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILL 178 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHH
Confidence 8888888877766543 247999994 3344433
No 38
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.87 E-value=4.2e-20 Score=191.36 Aligned_cols=152 Identities=11% Similarity=0.077 Sum_probs=133.6
Q ss_pred HhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 011743 33 ANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPD 112 (478)
Q Consensus 33 ~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 112 (478)
.+...++.+ .+++|++..+.+++.+.+.++..++.+++|+++|| +|||+++.++.++..++.+++..+.
T Consensus 41 ~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~--------- 109 (434)
T PRK11663 41 SFNAAMPEM-LADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDR-SNARYFMGIGLIATGIINILFGFSS--------- 109 (434)
T ss_pred hHHHhhHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhh-cCCchhHHHHHHHHHHHHHHHHHHh---------
Confidence 444455544 56799999999999999999999999999999999 8999999999999999988887764
Q ss_pred CCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 011743 113 CGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID 192 (478)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~ 192 (478)
+.+.+++.|++.|++.|...+...+++.|++|+++ |++++++++.+.++|..++|.+++++.+.
T Consensus 110 ----------~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~------rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 173 (434)
T PRK11663 110 ----------SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE------RGGWWAIWNTAHNVGGALIPLVVGAIALH 173 (434)
T ss_pred ----------HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 67788889999999999989999999999999877 99999999999999999999999999888
Q ss_pred chhHHHHHHHHHHHHHHHH
Q 011743 193 QGWWLGFLISSVATLIGLI 211 (478)
Q Consensus 193 ~~~~~~f~i~~~~~~~~~~ 211 (478)
+|||+.|++.++..++..+
T Consensus 174 ~gw~~~f~~~~i~~~~~~~ 192 (434)
T PRK11663 174 YGWRYGMMIAGIIAIVVGL 192 (434)
T ss_pred ccHHHHHHHHHHHHHHHHH
Confidence 9999999988776554433
No 39
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.87 E-value=9.6e-21 Score=190.80 Aligned_cols=153 Identities=10% Similarity=0.049 Sum_probs=133.7
Q ss_pred HHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCC
Q 011743 37 SMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKS 116 (478)
Q Consensus 37 ~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 116 (478)
....++.+++|++..+.+++.+++.++..++.++.|+++|| +|||+++..+.++.+++.+++..+.
T Consensus 16 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~------------- 81 (379)
T TIGR00881 16 LAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDR-SNPRVFLPIGLILCAIVNLFFGFST------------- 81 (379)
T ss_pred hhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHh-hCCeehhHHHHHHHHHHHHHHHHhh-------------
Confidence 33456788999999999999999999999999999999999 8999999999999999988887764
Q ss_pred ccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHH-HHHHhhhccchh
Q 011743 117 SCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGV-TAIVYVFIDQGW 195 (478)
Q Consensus 117 ~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p-~i~~~l~~~~~~ 195 (478)
+.+.+++.|++.|++.+...+...+++.|++|+++ |++++++.....++|..++| .+++.+.+..+|
T Consensus 82 ------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 149 (379)
T TIGR00881 82 ------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE------RGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSW 149 (379)
T ss_pred ------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh------heeeEeehhccchhHHHHHHHHHHHHHHhcCCc
Confidence 67888999999999999999999999999999877 89999999999999999999 566777777899
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 011743 196 WLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 196 ~~~f~i~~~~~~~~~~~~~~ 215 (478)
++.|++.++..++..+..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~ 169 (379)
T TIGR00881 150 HWVFIVPGIIAIIVSLICFL 169 (379)
T ss_pred hhHHHHHHHHHHHHHHHHhe
Confidence 99999887766554444443
No 40
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.87 E-value=2.2e-20 Score=188.02 Aligned_cols=154 Identities=17% Similarity=0.113 Sum_probs=131.5
Q ss_pred HHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 011743 35 GISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCG 114 (478)
Q Consensus 35 ~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (478)
...+.+++.+++|++..+.+++.+++.++..++.++.|+++|| +|||+++.++.++.+++.+++..+.
T Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~-~G~r~~~~~~~~~~~~~~~~~~~~~----------- 89 (377)
T TIGR00890 22 WTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADK-FGPRAVAMLGGILYGLGFTFYAIAD----------- 89 (377)
T ss_pred hhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHH-cCccchhHHhHHHHHHHHHHHHHHH-----------
Confidence 3455667888999999999999999999999999999999999 8999999999999999998888765
Q ss_pred CCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccch
Q 011743 115 KSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG 194 (478)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~ 194 (478)
+.+.++++|++.|++.+...+.....+.+++| ++ |+++.++...+.++|..+++.+.+.+.+..+
T Consensus 90 --------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 154 (377)
T TIGR00890 90 --------SLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DK------RGLASGIIIGGYGLGSFILSPLITSVINLEG 154 (377)
T ss_pred --------HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cc------cHHHHHHHHHhcchhHhHHHHHHHHHHhccc
Confidence 78889999999999999888888888888886 34 7899999999989998876666666666789
Q ss_pred hHHHHHHHHHHHHHHHHHHHh
Q 011743 195 WWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 195 ~~~~f~i~~~~~~~~~~~~~~ 215 (478)
||+.|++.++..++..+..+.
T Consensus 155 ~~~~f~~~~~~~~~~~~~~~~ 175 (377)
T TIGR00890 155 VPAAFIYMGIIFLLVIVLGAF 175 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999988876665544443
No 41
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.87 E-value=8.3e-20 Score=190.76 Aligned_cols=148 Identities=10% Similarity=0.033 Sum_probs=130.7
Q ss_pred ccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhH
Q 011743 45 EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIA 124 (478)
Q Consensus 45 ~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (478)
++|++..+.|.+.+.+.++..++.+++|+++|| +|||+++..+.++..++.+++..+. ..+.
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~-----------------~~~~ 131 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGK-YVFKWSIGIGMFLSSVISIVIPWAA-----------------GGGI 131 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHH-hCcchhhHHHHHHHHHHHHHHHHHH-----------------HcCc
Confidence 689999999999999999999999999999999 8999999999999888887765543 1146
Q ss_pred HHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccc-hhHHHHHHHH
Q 011743 125 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ-GWWLGFLISS 203 (478)
Q Consensus 125 ~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~-~~~~~f~i~~ 203 (478)
..+++.|+++|++.+...|....+++|++|+++ |++++++...+.++|..++|.+++++.+.. +|++.|++.+
T Consensus 132 ~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~ 205 (465)
T TIGR00894 132 ALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE------RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFG 205 (465)
T ss_pred hHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhh
Confidence 678899999999999999999999999999888 999999999999999999999999998874 9999999988
Q ss_pred HHHHHHHHHHHhc
Q 011743 204 VATLIGLIALAIG 216 (478)
Q Consensus 204 ~~~~~~~~~~~~~ 216 (478)
+..++..++++..
T Consensus 206 ~~~~~~~~~~~~~ 218 (465)
T TIGR00894 206 IVGCAWSLLWFVF 218 (465)
T ss_pred HHHHHHHHHHHHH
Confidence 8766665555443
No 42
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.87 E-value=2.8e-20 Score=191.50 Aligned_cols=344 Identities=13% Similarity=0.063 Sum_probs=218.3
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHH
Q 011743 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (478)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~ 95 (478)
....++...++..++.....+.+|.+. ++++.++.+.|++.+.+.+...++.++.|+++|| +||||++..+.++.+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr-~g~~~~l~~~~~~~~~~ 95 (417)
T PRK10489 18 AFRAVFIARFISIFGLGLLGVAVPVQI-QMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADR-YDRKKLILLARGTCGLG 95 (417)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhh-cCCceEEEehHHHHHHH
Confidence 344556667777777666666677665 4677899999999999999999999999999999 89999999988888877
Q ss_pred HHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHH
Q 011743 96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT 175 (478)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (478)
...+....... ..+.+.+++.|++.|++.+...++..+.+.|.+|+++ |+++.++.+...
T Consensus 96 ~~~~~~~~~~~--------------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 155 (417)
T PRK10489 96 FIGLALNAFLP--------------EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGREN------LMQAGAITMLTV 155 (417)
T ss_pred HHHHHHHHHcC--------------CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHH------HHHHHHHHHHHH
Confidence 76654321000 1256778889999999998888999999999998777 889999999999
Q ss_pred HHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhcCCCCCCCchhh
Q 011743 176 TLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEEL 255 (478)
Q Consensus 176 ~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (478)
++|..+||.+++.+.+..+|++.|++.++..+++.+.....++ .+++.++ .....++.
T Consensus 156 ~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~------------------~~~~~~~~ 213 (417)
T PRK10489 156 RLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPA----LPPPPQP------------------REHPLRSL 213 (417)
T ss_pred hHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCC----CCCCCcc------------------cccchHHH
Confidence 9999999999999988789999998877766655544433221 1110000 00000000
Q ss_pred hhhhhhhccCcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhHhhcchhhhh
Q 011743 256 YEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVT 335 (478)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 335 (478)
.+ . +. .+...+.+...+...+...... ....+.+.+..
T Consensus 214 ~~-----------------~--~~----------------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~ 251 (417)
T PRK10489 214 LA-----------------G--FR----------------------FLLASPVVGGIALLGGLLTMAS-AVRVLYPALAD 251 (417)
T ss_pred HH-----------------H--HH----------------------HHHcChHHHHHHHHHHHHHHHH-hHHHhhHHHHH
Confidence 00 0 00 0000111111111111111111 11122222322
Q ss_pred hhcccCCCCCCcccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011743 336 QGAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRR 415 (478)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~ 415 (478)
+..+.+. ...+.+.....++.++...+.+++. +|. ++.+.+..+.++.+++++...+.
T Consensus 252 ~~~g~~~------~~~g~~~~~~~~g~~ig~~~~~~l~----~~~-------~~~~~l~~~~~~~~~~~~~~~~~----- 309 (417)
T PRK10489 252 EVWQMGA------AQIGLLYAAVPLGAALGALTSGWLA----HSA-------RPGLLMLLSTLGSFLAVGLFGLM----- 309 (417)
T ss_pred hccCCCh------hHhHHHHHHHHHHHHHHHHHHHHhh----hcc-------CcchHHHHHHHHHHHHHHHHHcc-----
Confidence 2122221 1223344444555555555544432 221 23344566666666666554433
Q ss_pred hhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHhhccC
Q 011743 416 NAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 477 (478)
Q Consensus 416 ~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~~lg~ 477 (478)
.+.+......++.+++.+...+...++..+..|++.||+++|+.+...++|+
T Consensus 310 ----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~ 361 (417)
T PRK10489 310 ----------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGD 361 (417)
T ss_pred ----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhH
Confidence 2344555667778888888888888999999999999999999988887764
No 43
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.87 E-value=1.2e-19 Score=187.70 Aligned_cols=168 Identities=16% Similarity=0.152 Sum_probs=125.0
Q ss_pred HHHHHHHHHHHHhHHHHHHHcccccC---CchhhHhHHHHHHH---HHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHH
Q 011743 22 VLSALENMGFIANGISMVLYFKNEMH---FDIAGASNTLTNFF---GSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (478)
Q Consensus 22 ~~~~~~~~~~~~v~~~l~~yl~~~lg---~~~~~~~~~~~~~~---~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~ 95 (478)
+..+++.+... +..++..++.++++ .+..+.+.+...+. ++..++.+++|+++|| +||||++..+.++++++
T Consensus 29 ~~~~~~~~d~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr-~Grr~~l~~~~~~~~~~ 106 (432)
T PRK10406 29 SGNLVEWFDFY-VYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADK-HGRKKSMLISVCMMCFG 106 (432)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHH
Confidence 34555555544 46677778888874 45554444444444 4444889999999999 89999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHH
Q 011743 96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT 175 (478)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (478)
.+++.++.+.... | ..+...+++.|+++|+|.|+..|...++++|++|+++ |++..++.+...
T Consensus 107 ~~~~~~~~~~~~~-----~------~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~------rg~~~~~~~~~~ 169 (432)
T PRK10406 107 SLVIACLPGYETI-----G------TWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR------KGFYASFQYVTL 169 (432)
T ss_pred HHHHhhcCCchhH-----H------HHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc------ccHHHHHHHHHH
Confidence 9888775411000 0 0134578899999999999999999999999999888 889999888888
Q ss_pred HHHHHHHHHHHHhhh--------ccchhHHHHHHHHHHHHH
Q 011743 176 TLAAMIGVTAIVYVF--------IDQGWWLGFLISSVATLI 208 (478)
Q Consensus 176 ~~g~~~~p~i~~~l~--------~~~~~~~~f~i~~~~~~~ 208 (478)
+.|..+++.+...+. ..+|||++|++.++..++
T Consensus 170 ~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll 210 (432)
T PRK10406 170 IGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVV 210 (432)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHH
Confidence 888888877655443 257999999987665443
No 44
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.86 E-value=4.2e-20 Score=192.45 Aligned_cols=151 Identities=11% Similarity=0.080 Sum_probs=127.1
Q ss_pred HHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccc
Q 011743 40 LYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCL 119 (478)
Q Consensus 40 ~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (478)
..+.+++|.+..+++++.+.+.+...++.++.|+++|| +|||++++.+.++..++.+++..+.
T Consensus 43 ~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~---------------- 105 (455)
T TIGR00892 43 KELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNR-FGCRPVVIAGGLLASLGMILASFSS---------------- 105 (455)
T ss_pred HHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHH-cCchHHHHhhHHHHHHHHHHHHHhh----------------
Confidence 34567999999999999999999999999999999999 8999999999999998888877664
Q ss_pred cchhHHHHHH-HHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHH
Q 011743 120 KGAIAAYFYG-SLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLG 198 (478)
Q Consensus 120 ~~~~~~~~~~-~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~ 198 (478)
+.+.+++ .|++.|++.+...+...+++.++++ ++ |+++.++.+.+.++|..++|.+++++.+.+|||+.
T Consensus 106 ---~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~------r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~ 175 (455)
T TIGR00892 106 ---NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RR------RPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGS 175 (455)
T ss_pred ---hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hh------HHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHH
Confidence 4555544 5688999998876666778888885 45 89999999999999999999999999888999999
Q ss_pred HHHHHHHHHHHHHHHHhcC
Q 011743 199 FLISSVATLIGLIALAIGK 217 (478)
Q Consensus 199 f~i~~~~~~~~~~~~~~~~ 217 (478)
|++.+++.+++.+..++.+
T Consensus 176 f~~~~~~~~~~~v~~~~~~ 194 (455)
T TIGR00892 176 FLILGGLLLHCCVCGALMR 194 (455)
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 9999887766655544443
No 45
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.86 E-value=7e-20 Score=190.68 Aligned_cols=174 Identities=9% Similarity=0.023 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHHHHHh---HHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 18 TFVFVLSALENMGFIAN---GISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 18 ~~l~~~~~~~~~~~~~v---~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
|.++...++....+|.. .....+|+.++ |++..+.+++.+++.++..++.++.|+++|| +|||++++++.++.++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr-~g~k~~l~~~~~~~~i 105 (452)
T PRK11273 28 WQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDR-SNPRVFLPAGLILAAA 105 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCCchhHHHHHHHHHH
Confidence 33334333444444432 23344577777 9999999999999999999999999999999 8999999999999998
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (478)
+.+++.+.... ..+...+++.|++.|++.|...|.....+.|++|+++ |++++++++.+
T Consensus 106 ~~~~~~~~~~~---------------~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~ 164 (452)
T PRK11273 106 VMLFMGFVPWA---------------TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWNCA 164 (452)
T ss_pred HHHHHHhhhcc---------------cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH------HHHHHHHHHHH
Confidence 88877765310 1256778888999999999988888888999999877 89999999898
Q ss_pred HHHHHH-HHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 011743 175 TTLAAM-IGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (478)
Q Consensus 175 ~~~g~~-~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~ 214 (478)
.++|+. .+|.++..+....+||+.|++.++..++..++..
T Consensus 165 ~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~ 205 (452)
T PRK11273 165 HNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAF 205 (452)
T ss_pred HHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 998864 4565443333345899999998776655444433
No 46
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.86 E-value=3e-19 Score=187.88 Aligned_cols=176 Identities=14% Similarity=0.078 Sum_probs=130.0
Q ss_pred cchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhh-HhH-----HHHHHHHHHHHHhhHHHHHhhhccchhHHHHH
Q 011743 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAG-ASN-----TLTNFFGSTFLLCLVGGFISDTYLSRFATCLV 87 (478)
Q Consensus 14 ~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~-~~~-----~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~ 87 (478)
++......+..+++.+-+. +..+...++.++++.+..+ ..+ +.++..++..++.++.|+++|| +|||+++.+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr-~Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFG-VYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDK-YGRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHH
Confidence 3455555667777766544 5556667888888644322 122 2466678888999999999999 899999999
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhH
Q 011743 88 FGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASY 167 (478)
Q Consensus 88 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~ 167 (478)
++++++++.++++++.+...+. ...+..+++.|+++|+|.|+..++..++++|++|+++ |++.
T Consensus 93 ~~~l~~i~~~~~a~~~~~~~~g-----------~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~------Rg~~ 155 (490)
T PRK10642 93 TIVIMSISTFCIGLIPSYATIG-----------IWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK------RGFM 155 (490)
T ss_pred HHHHHHHHHHHHHhcccHHHHH-----------HHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC------CcHH
Confidence 9999999999998775210000 0012348899999999999999999999999999988 8999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh--------ccchhHHHHHHHHHHHHH
Q 011743 168 FNFYLFATTLAAMIGVTAIVYVF--------IDQGWWLGFLISSVATLI 208 (478)
Q Consensus 168 ~~~~~~~~~~g~~~~p~i~~~l~--------~~~~~~~~f~i~~~~~~~ 208 (478)
.++...+.++|..+++.+...+. ..+|||+.|++.++..++
T Consensus 156 ~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~ 204 (490)
T PRK10642 156 GSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII 204 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH
Confidence 99888888888887776654432 257999999987654443
No 47
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.86 E-value=1.2e-19 Score=185.42 Aligned_cols=152 Identities=13% Similarity=0.155 Sum_probs=131.5
Q ss_pred HHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 011743 31 FIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHP 110 (478)
Q Consensus 31 ~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 110 (478)
++.+.+.+| .+++++|.|..+.+++.+.+.++..++.++.|+++|| +||||++..+..+++++.+++.+++
T Consensus 25 ~~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr-~G~r~~l~~~~~l~~~~~~~~~~a~------- 95 (393)
T PRK09705 25 LTSVGPLLP-QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQH-VSERRSVAISLLLIAVGALMRELYP------- 95 (393)
T ss_pred hhccchhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHH-hCchHHHHHHHHHHHHHHHHHHHCc-------
Confidence 354555555 5678999999999999999999999999999999999 8999999999999999999998875
Q ss_pred CCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 011743 111 PDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF 190 (478)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~ 190 (478)
+...++++|+++|+|.+...+...+.+.|++| ++ |+++++.+..+.++|..+++.+++++.
T Consensus 96 ------------~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~~~g~~~g~~~~~~l~ 156 (393)
T PRK09705 96 ------------QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR------TPLVMGLWSAALMGGGGLGAAITPWLV 156 (393)
T ss_pred ------------chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc------chhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67788999999999999999999999999986 55 889999999999999999999999888
Q ss_pred ccc-hhHHHHHHHHHHHHHHH
Q 011743 191 IDQ-GWWLGFLISSVATLIGL 210 (478)
Q Consensus 191 ~~~-~~~~~f~i~~~~~~~~~ 210 (478)
++. +||..+.+.++..++..
T Consensus 157 ~~~~~w~~~~~~~~~~~~~~~ 177 (393)
T PRK09705 157 QHSETWYQTLAWWALPAVVAL 177 (393)
T ss_pred HhcCCHHHHHHHHHHHHHHHH
Confidence 765 89998876555444333
No 48
>PRK11043 putative transporter; Provisional
Probab=99.86 E-value=2.6e-19 Score=183.27 Aligned_cols=170 Identities=17% Similarity=0.187 Sum_probs=139.0
Q ss_pred HHHHHHHHHHHHHHhHHHHHHH--cccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 011743 20 VFVLSALENMGFIANGISMVLY--FKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLV 97 (478)
Q Consensus 20 l~~~~~~~~~~~~~v~~~l~~y--l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~ 97 (478)
++....+...++++...+.|.+ +.+++|.++.+.+++.+++.++..++.++.|+++|| +|||+++..+.++..++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~ 86 (401)
T PRK11043 8 LVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDR-YGRKPVLLAGLSLFALGSL 86 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhh-cCCcHHHHHHHHHHHHHHH
Confidence 3333333444444444455544 678999999999999999999999999999999999 8999999999999888887
Q ss_pred HHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHH
Q 011743 98 MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTL 177 (478)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 177 (478)
+...+. +.+.+++.|+++|++.+...+...+++.|.+|+++ +.+.++......++
T Consensus 87 ~~~~~~-------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 141 (401)
T PRK11043 87 GMLWVE-------------------SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK------ANRVFATIMPLVAL 141 (401)
T ss_pred HHHHhc-------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHHH
Confidence 776653 67788899999999988888888889999999776 77888888888889
Q ss_pred HHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHh
Q 011743 178 AAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 178 g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~ 215 (478)
|..++|.+++++.+..|||+.|++.++..++..+..+.
T Consensus 142 ~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 142 SPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLR 179 (401)
T ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988899999999887776665554443
No 49
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.86 E-value=1.5e-19 Score=183.86 Aligned_cols=155 Identities=9% Similarity=0.091 Sum_probs=138.3
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHH
Q 011743 12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL 91 (478)
Q Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 91 (478)
.+.|.++.+++..++...+...+.+.+|.|.. ++|.+..++|++.+.+.++..++.++.|+++|| +||||.+..+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr-~g~k~~~~~~~~~ 80 (381)
T PRK03633 3 TYTRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKR-IGFNRSYYLASLI 80 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-HHHHHHHHHHHHH
Confidence 34677899999999999998888899998876 689999999999999999999999999999999 8999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHH
Q 011743 92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (478)
Q Consensus 92 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~ 171 (478)
.+++...+..+. +.+.++++|+++|++.+...|...+.+.+..++++ |++.++++
T Consensus 81 ~~~~~~~~~~~~-------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 135 (381)
T PRK03633 81 FAAGCAGLGLMV-------------------GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN------RGRLLAAY 135 (381)
T ss_pred HHHHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHH
Confidence 999888877664 67888899999999999988888777888888766 89999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccc
Q 011743 172 LFATTLAAMIGVTAIVYVFIDQ 193 (478)
Q Consensus 172 ~~~~~~g~~~~p~i~~~l~~~~ 193 (478)
....++|..+||.+++.+.+..
T Consensus 136 ~~~~~~g~~~g~~~~~~l~~~~ 157 (381)
T PRK03633 136 MMVYYLGTVLGQLLVSKVSTEL 157 (381)
T ss_pred HHHHHHHHHHHHHHHhcccccc
Confidence 9999999999999999887653
No 50
>PRK03699 putative transporter; Provisional
Probab=99.86 E-value=6.8e-19 Score=179.92 Aligned_cols=174 Identities=14% Similarity=0.151 Sum_probs=143.5
Q ss_pred CcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHH
Q 011743 13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE 92 (478)
Q Consensus 13 ~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 92 (478)
++|..+..++..++........-..++. +.+++|+|..+.+++.+.+.++..++.++.|+++|| +||||++..+.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~g~r~~~~~~~~~~ 82 (394)
T PRK03699 5 RIKLTWISFLSYALTGALVIVTGMVMGP-IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEI-IPLKRQLIFGFALM 82 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHH
Confidence 4566676666666666665544455544 567899999999999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHH
Q 011743 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (478)
Q Consensus 93 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~ 172 (478)
.++.+++..+. +.+.+++.|+++|++.|...+...+.+.|.+|+++ |++..+..+
T Consensus 83 ~i~~~l~~~~~-------------------~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~------r~~~~~~~~ 137 (394)
T PRK03699 83 ILAVAGLMFSH-------------------SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ------RGSRLLFTD 137 (394)
T ss_pred HHHHHHHHHcc-------------------hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch------HHHHHHHHH
Confidence 99888877654 67788899999999999999999999999998776 888888888
Q ss_pred HHHHHHHHHHHHHHHhhhc-cchhHHHHHHHHHHHHHHHHHH
Q 011743 173 FATTLAAMIGVTAIVYVFI-DQGWWLGFLISSVATLIGLIAL 213 (478)
Q Consensus 173 ~~~~~g~~~~p~i~~~l~~-~~~~~~~f~i~~~~~~~~~~~~ 213 (478)
...++|+.++|.+.+++.. ..+||+.|.+.++..++..+..
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK03699 138 SFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILT 179 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 8888999999998887754 5799999998777665544433
No 51
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.86 E-value=8e-19 Score=179.90 Aligned_cols=171 Identities=8% Similarity=0.005 Sum_probs=143.2
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHH
Q 011743 12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL 91 (478)
Q Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 91 (478)
+.||.+....+..++..++.+....+++.|+ +++|.+..+++++.+.+.++..++.++.|+++|| +||||++..+.++
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr-~g~k~~l~~~~~~ 87 (402)
T TIGR00897 10 GIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEI-IGPLKTMMIGLLL 87 (402)
T ss_pred CCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHH
Confidence 6788899999999999999888888999888 5789999999999999999999999999999999 8999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHH
Q 011743 92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (478)
Q Consensus 92 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~ 171 (478)
..++.+++...... ..+...+++.|++.|+|.+...+...+.+.+.+|+++ |++++++.
T Consensus 88 ~~~~~~~~~~~~~~---------------~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~------~g~~~g~~ 146 (402)
T TIGR00897 88 WCVGHAAFIVFGLG---------------HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDN------LSSAVGWF 146 (402)
T ss_pred HHHHHHHHHHHhcc---------------CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHH------HHHHHHHH
Confidence 88887655321100 1256777889999999998888888888889998877 99999999
Q ss_pred HHHHHHHH-HHHHHHHHhhhccchhHHHHHHHHHH
Q 011743 172 LFATTLAA-MIGVTAIVYVFIDQGWWLGFLISSVA 205 (478)
Q Consensus 172 ~~~~~~g~-~~~p~i~~~l~~~~~~~~~f~i~~~~ 205 (478)
....++|. .++|.+++++.+..||+..++.....
T Consensus 147 ~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~ 181 (402)
T TIGR00897 147 WAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAF 181 (402)
T ss_pred HHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 99999996 58999999888878866655544333
No 52
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.85 E-value=4.4e-20 Score=193.00 Aligned_cols=156 Identities=8% Similarity=-0.111 Sum_probs=128.9
Q ss_pred HHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCcc
Q 011743 39 VLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSC 118 (478)
Q Consensus 39 ~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 118 (478)
...+.+++|++..+.|++.+.+.++..++.+++|+++|| +||||++..+.++.+++.++++.....
T Consensus 52 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~------------- 117 (467)
T PRK09556 52 QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADG-KNTKQFLPFLLILSAICMLGFGASLGS------------- 117 (467)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhc-cCccchHHHHHHHHHHHHHHHHHHHhc-------------
Confidence 345678999999999999999999999999999999999 899999999988888877666543100
Q ss_pred ccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccc---hh
Q 011743 119 LKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ---GW 195 (478)
Q Consensus 119 ~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~---~~ 195 (478)
-..+.+.+++.|+++|++.+...|...++++|++|+++ |++++++...+.++|..+++.+..++.+.. +|
T Consensus 118 -~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~ 190 (467)
T PRK09556 118 -GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK------RGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHV 190 (467)
T ss_pred -ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc------eeeeEEeeecccchhhhHHHHHHHHHHHhhccCcc
Confidence 01278889999999999999999999999999999988 999999999999999999998887765542 58
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 011743 196 WLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 196 ~~~f~i~~~~~~~~~~~~~~ 215 (478)
+..|.+.++..++..+..++
T Consensus 191 ~~~f~~~g~~~~~~~i~~~~ 210 (467)
T PRK09556 191 IGMFIFPSIIALIIGFIGLR 210 (467)
T ss_pred hhHHHHHHHHHHHHHHHHHH
Confidence 88888877666544444333
No 53
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.85 E-value=4e-19 Score=182.82 Aligned_cols=148 Identities=14% Similarity=0.112 Sum_probs=130.9
Q ss_pred cccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccc
Q 011743 42 FKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKG 121 (478)
Q Consensus 42 l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (478)
+.+++|.+..++++..+++.++..++.++.|+++|| +||||++..+.++++++.+++..+.
T Consensus 42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~a~------------------ 102 (413)
T PRK15403 42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDR-IGRRPVLITGALIFTLACAATLFTT------------------ 102 (413)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHH-cCchHHHHHHHHHHHHHHHHHHHcC------------------
Confidence 567899999999999999999999999999999999 8999999999999999988887664
Q ss_pred hhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHH
Q 011743 122 AIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLI 201 (478)
Q Consensus 122 ~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i 201 (478)
+.+.++++|+++|++.+...+...+.+.|.+|+++ |.+.+++.....++|..+||.+++.+.+..|||+.|++
T Consensus 103 -~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~ 175 (413)
T PRK15403 103 -SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK------GIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAI 175 (413)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 77889999999999988766777788899999877 88999999999999999999999999888899999999
Q ss_pred HHHHHHHHHHHHHh
Q 011743 202 SSVATLIGLIALAI 215 (478)
Q Consensus 202 ~~~~~~~~~~~~~~ 215 (478)
.++..+++.+..++
T Consensus 176 ~~~~~~i~~~~~~~ 189 (413)
T PRK15403 176 IAVMGLIAFVGLLL 189 (413)
T ss_pred HHHHHHHHHHHHHH
Confidence 88877666554443
No 54
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.85 E-value=2.8e-19 Score=182.06 Aligned_cols=174 Identities=12% Similarity=0.078 Sum_probs=152.1
Q ss_pred cchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHH
Q 011743 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (478)
Q Consensus 14 ~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 93 (478)
++.++.+.+..++...+.+.+.+.++. +.+++|.+..+.+++.+.+.++..++.++.|+++|| +|||+++..+.++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~ 79 (382)
T PRK10091 2 KKVILSLALGTFGLGMAEFGIMGVLTE-LAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSR-YSLKHILLFLVALCV 79 (382)
T ss_pred cchHHHHHHHHHHHHhhHHHHHhChHH-HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHcc-CccHHHHHHHHHHHH
Confidence 466788888888888888877777765 467899999999999999999999999999999999 899999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHH
Q 011743 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (478)
Q Consensus 94 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~ 173 (478)
++.+++..+. +.+.+++.|++.|++.+...+...+++.|++|+++ |++.+++...
T Consensus 80 ~~~~l~~~~~-------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 134 (382)
T PRK10091 80 IGNAMFTLSS-------------------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK------VTAAVAGMVS 134 (382)
T ss_pred HHHHHHHHhC-------------------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH------hhHHHHHHHH
Confidence 9998887764 78889999999999999988888888999988766 8889999888
Q ss_pred HHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 011743 174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (478)
Q Consensus 174 ~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~ 214 (478)
+.++|..++|.+++++.+..+||+.|++.++..++..+...
T Consensus 135 ~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 175 (382)
T PRK10091 135 GMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIY 175 (382)
T ss_pred HHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888999999998877665554433
No 55
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.85 E-value=1.2e-20 Score=187.09 Aligned_cols=180 Identities=12% Similarity=0.046 Sum_probs=160.2
Q ss_pred cCCcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHH
Q 011743 11 KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGT 90 (478)
Q Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~ 90 (478)
+...+.+..+++..++|++-=|.+-. ...-.++.+|.++...|.+...+.+...++.|+.|+++|| +.||+++.+|.+
T Consensus 29 ~~~~~~l~il~~vnlmny~Dr~~iag-v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadr-yNR~~v~~vG~~ 106 (493)
T KOG1330|consen 29 KSPTLTLVILCLVNLMNYADRYTIAG-VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADR-YNRKRVIAVGIF 106 (493)
T ss_pred ccchHHHHHHHHHHHHHHhhhhhhhh-hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhh-cCcceEEeeHHH
Confidence 34456678888999999998886665 3345677899999999999999999999999999999999 799999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHH
Q 011743 91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF 170 (478)
Q Consensus 91 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~ 170 (478)
+++++.+....+. .++++.+.|.+.|+|.+.+.|..+++++|.||+.+ |++.+++
T Consensus 107 iW~~Av~~~~fs~-------------------~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~------Rs~~~~i 161 (493)
T KOG1330|consen 107 IWTLAVFASGFSN-------------------HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK------RSRVLGI 161 (493)
T ss_pred HHHHHHHHHHHHH-------------------HHHHHHHHHHHhccchhhhcccchhHhhhcCcchh------hhHHHHH
Confidence 9999999998875 79999999999999999999999999999999998 9999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccch-hHHHHHHHHHHHHHHHHHHHhcC
Q 011743 171 YLFATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLIALAIGK 217 (478)
Q Consensus 171 ~~~~~~~g~~~~p~i~~~l~~~~~-~~~~f~i~~~~~~~~~~~~~~~~ 217 (478)
+|+++++|..+|.++++.+.+..+ |||+|...+++.++..++..++.
T Consensus 162 fy~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~ 209 (493)
T KOG1330|consen 162 FYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFV 209 (493)
T ss_pred hhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhc
Confidence 999999999999999998887665 99999999998876666555543
No 56
>TIGR00898 2A0119 cation transport protein.
Probab=99.84 E-value=5e-19 Score=186.74 Aligned_cols=148 Identities=17% Similarity=0.115 Sum_probs=129.6
Q ss_pred HHcccccCCc---hhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCC
Q 011743 40 LYFKNEMHFD---IAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKS 116 (478)
Q Consensus 40 ~yl~~~lg~~---~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 116 (478)
.-+.+++|++ ..+.+++.+++.++..++.++.|+++|| +|||+++.++.++.+++.++..++.
T Consensus 113 ~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr-~Grr~~~~~~~~~~~i~~~~~~~~~------------- 178 (505)
T TIGR00898 113 STIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDR-FGRKKVLLLSTLVTAVSGVLTAFSP------------- 178 (505)
T ss_pred ccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhh-ccchHHHHHHHHHHHHHHHHHHHcc-------------
Confidence 3467889998 8999999999999999999999999999 8999999999999999888877664
Q ss_pred ccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccchhH
Q 011743 117 SCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWW 196 (478)
Q Consensus 117 ~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~ 196 (478)
+.+.+++.|++.|++.+...+...+++.|.+|+++ |+++.++...+..+|..++|.++..+. +||
T Consensus 179 ------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~---~wr 243 (505)
T TIGR00898 179 ------NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ------RAIVGTLIQVFFSLGLVLLPLVAYFIP---DWR 243 (505)
T ss_pred ------cHHHHHHHHHHHHhhccchHHHHHHHhheecChhh------hHHHHHHHHHHHHHHHHHHHHHHHHhh---HHH
Confidence 78889999999999999999999999999999888 889999988888999999998876664 399
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 011743 197 LGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 197 ~~f~i~~~~~~~~~~~~~~~ 216 (478)
+.|++.++..++..+..++.
T Consensus 244 ~~~~~~~i~~~~~~~~~~~~ 263 (505)
T TIGR00898 244 WLQLAVSLPTFLFFLLSWFV 263 (505)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99998887766665555443
No 57
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.84 E-value=3.8e-19 Score=186.22 Aligned_cols=156 Identities=14% Similarity=0.128 Sum_probs=124.8
Q ss_pred ccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhc-ccCCCCCCCCCccccchh
Q 011743 45 EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYS-KSLHPPDCGKSSCLKGAI 123 (478)
Q Consensus 45 ~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 123 (478)
++|.+..+.+++.+++.++..+++++.|+++|| +||||++.++.+++.++.+....+... ....+ ++...
T Consensus 49 ~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr-~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~--------~~~~~ 119 (479)
T PRK10077 49 SESAANSLLGFCVASALIGCIIGGALGGYCSNR-FGRRDSLKIAAVLFFISALGSAWPEFGFTSIGP--------DNTGY 119 (479)
T ss_pred cccCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHhhccccccccc--------cchhH
Confidence 348899999999999999999999999999999 899999999999998888776653200 00000 00124
Q ss_pred HHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhh--------ccchh
Q 011743 124 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF--------IDQGW 195 (478)
Q Consensus 124 ~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~--------~~~~~ 195 (478)
...++++|+++|++.|...|...++++|++|+++ |+++++....+..+|..+++.+++.+. +..||
T Consensus 120 ~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gW 193 (479)
T PRK10077 120 VPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI------RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGW 193 (479)
T ss_pred HHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCCh
Confidence 5678899999999999999999999999999888 999999999999999999887765543 34689
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 011743 196 WLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 196 ~~~f~i~~~~~~~~~~~~~~ 215 (478)
|+.|++.++..++..+..++
T Consensus 194 r~~f~~~~~~~~~~~~~~~~ 213 (479)
T PRK10077 194 RYMFASEAIPALLFLMLLYF 213 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHc
Confidence 99999887766655444333
No 58
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.84 E-value=4.9e-19 Score=185.48 Aligned_cols=174 Identities=10% Similarity=0.065 Sum_probs=132.8
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
+.........++.....+.+.+.+ .++.+++|++..+.+++.+.+.++..++.+++|+++|| +|||+++..+.++..+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~G~r~~~~~~~~~~~~ 113 (476)
T PLN00028 36 RAFHLSWISFFTCFVSTFAAAPLL-PIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDL-YGPRYGSAFLLMLTAP 113 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHH
Confidence 334444444455555555444444 46688999999999999999999999999999999999 8999999999999888
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (478)
+.+++..+. +...+++.|++.|++.+...+ ....++|++|+++ |++++++....
T Consensus 114 ~~~~~~~~~-------------------s~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~~~~~------rg~a~g~~~~~ 167 (476)
T PLN00028 114 AVFCMSLVS-------------------SATGFIAVRFFIGFSLATFVS-CQYWMSTMFNGKI------VGTANGIAAGW 167 (476)
T ss_pred HHHHHHHhc-------------------CHHHHHHHHHHHHHHHHhhHH-HHHHHHHhcChhh------eeHHHHHHHHH
Confidence 888777664 667788899999999886543 4567899999887 99999998877
Q ss_pred HHHHHHHHHHHHHhhhc---------cchhHHHHHHHHHHHHHHHHHHHhc
Q 011743 175 TTLAAMIGVTAIVYVFI---------DQGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 175 ~~~g~~~~p~i~~~l~~---------~~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
.++|..+++.+.+.+.. ..|||+.|++.+++.++..+..++.
T Consensus 168 ~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~ 218 (476)
T PLN00028 168 GNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTL 218 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 78888777666654421 2489999999888776555444443
No 59
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.84 E-value=3.1e-19 Score=185.37 Aligned_cols=146 Identities=15% Similarity=0.220 Sum_probs=125.0
Q ss_pred CchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHH
Q 011743 48 FDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYF 127 (478)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (478)
.+..+.+++.+++.++..++.++.|+++|| +||||++..+.++.+++.+++..... ..+.+.+
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~grr~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~ 130 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDR-FGRKKSLLIIALLFVIGAILMGLAAF----------------ALSVEML 130 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhh-hhhHHHHHHHHHHHHHHHHHHHHhcc----------------ccchHHH
Confidence 338999999999999999999999999999 89999999999999999888865532 1245688
Q ss_pred HHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHH---HhhhccchhHHHHHHHHH
Q 011743 128 YGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAI---VYVFIDQGWWLGFLISSV 204 (478)
Q Consensus 128 ~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~---~~l~~~~~~~~~f~i~~~ 204 (478)
+++|+++|+|.+...+...++++|++|+++ |++++++.+...++|..+++.++ +.+.+..+||+.|++.++
T Consensus 131 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~ 204 (481)
T TIGR00879 131 IVGRVLLGIGVGIASALVPMYLSEIAPKAL------RGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLI 204 (481)
T ss_pred HHHHHHHHhhhhHHHhHHHHHHHccCChhh------hhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHH
Confidence 999999999999999999999999999888 99999999999999999999998 666667899999999666
Q ss_pred HHHHHHHHHHhc
Q 011743 205 ATLIGLIALAIG 216 (478)
Q Consensus 205 ~~~~~~~~~~~~ 216 (478)
..++.++..++.
T Consensus 205 ~~~~~~~~~~~l 216 (481)
T TIGR00879 205 PAGLLFLGLFFL 216 (481)
T ss_pred HHHHHHHHHhcC
Confidence 555554444433
No 60
>PRK09952 shikimate transporter; Provisional
Probab=99.84 E-value=1e-18 Score=181.14 Aligned_cols=175 Identities=17% Similarity=0.157 Sum_probs=126.9
Q ss_pred CcchhHHHHHHHHHHHHHHHHhHHHHHHHccccc--CCchhhHhHHH-----HHHHHHHHHHhhHHHHHhhhccchhHHH
Q 011743 13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEM--HFDIAGASNTL-----TNFFGSTFLLCLVGGFISDTYLSRFATC 85 (478)
Q Consensus 13 ~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~l--g~~~~~~~~~~-----~~~~~~~~~~~~~~G~laDr~~Gr~~~~ 85 (478)
++|..+..++..+++.+-...+....+.++.+++ +.++.+ +.+. ++..+...++.++.|+++|| +|||+++
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr-~Grr~~l 97 (438)
T PRK09952 20 ARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDR-LGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHh-hccHHHH
Confidence 3455666666667766665544444445566555 666663 4443 23334466777888999999 8999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhh
Q 011743 86 LVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALA 165 (478)
Q Consensus 86 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~ 165 (478)
..+.++++++.+++.++++.+... ......+++.|+++|++.|+..|....++.|++|+++ |+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------rg 160 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIG-----------WWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNK------KA 160 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHH-----------HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCC------Cc
Confidence 999999999999888764210000 0012358889999999999999999999999999888 88
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhh--------ccchhHHHHHHHHHHH
Q 011743 166 SYFNFYLFATTLAAMIGVTAIVYVF--------IDQGWWLGFLISSVAT 206 (478)
Q Consensus 166 ~~~~~~~~~~~~g~~~~p~i~~~l~--------~~~~~~~~f~i~~~~~ 206 (478)
+..+....+..+|..+++.+...+. ..+|||+.|++.++..
T Consensus 161 ~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~ 209 (438)
T PRK09952 161 FYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLV 209 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHH
Confidence 8888888888888888877666554 2479999999876654
No 61
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.84 E-value=1.2e-18 Score=176.41 Aligned_cols=158 Identities=13% Similarity=0.135 Sum_probs=137.8
Q ss_pred HHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 011743 31 FIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHP 110 (478)
Q Consensus 31 ~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 110 (478)
.....+.++.+. +++|+++.+.+++.+++.++..++.++.|+++|| +|||+++..+.++.+++..++....
T Consensus 7 ~~~~~p~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~i~~~~~~~~~------- 77 (377)
T PRK11102 7 IDMYLPALPVIA-ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADS-FGRKPVILGGTLVFALAAVACALAQ------- 77 (377)
T ss_pred HHHHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhh-cCChHHHHHHHHHHHHHHHHHHHHc-------
Confidence 344556777665 5699999999999999999999999999999999 8999999999999999988887654
Q ss_pred CCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 011743 111 PDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF 190 (478)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~ 190 (478)
+.+.+++.|++.|++.+...+...+++.|.+|+++ |++.+++.+...++|..++|.+++.+.
T Consensus 78 ------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~l~ 139 (377)
T PRK11102 78 ------------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE------FSRMMSFVTLVMTIAPLLAPIIGGWLL 139 (377)
T ss_pred ------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67778899999999999999999999999999877 899999999999999999999999998
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHh
Q 011743 191 IDQGWWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 191 ~~~~~~~~f~i~~~~~~~~~~~~~~ 215 (478)
+..+|++.|++.++..++..+....
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (377)
T PRK11102 140 VWFSWHAIFWVLALAAILAAALVFF 164 (377)
T ss_pred HHcChHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999887776655544433
No 62
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.84 E-value=5.2e-19 Score=182.33 Aligned_cols=354 Identities=10% Similarity=0.006 Sum_probs=203.2
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
+..|.+.+..++..+++..+.++++.|+++++|+++.+.|.+.+.+.+...+++++.|+++|| +||||++.++..+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr-~g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDK-LGLKKHLLWIISGLLV 88 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHH
Confidence 567777778888888888889999999999999999999999999999999999999999999 8999999887766555
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (478)
+...+......+ .-......+..+.++..+...+...+.+.++.++.. ++++..++..+..
T Consensus 89 ~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~g~~~~~ 149 (420)
T PRK09528 89 LFGPFFIYVFAP---------------LLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVS----RRSGFEYGRARMW 149 (420)
T ss_pred HHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHH----hhccccchhhHHh
Confidence 433222110000 000011222233333333333333333334332111 1256677888888
Q ss_pred HHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhcCCCCCCCchh
Q 011743 175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEE 254 (478)
Q Consensus 175 ~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (478)
.++|..++|.+++++.+ .+|+..|++.++..++.++..+..+++.++++...++ . .+
T Consensus 150 ~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~--~~----- 206 (420)
T PRK09528 150 GSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANA---------------L--GA----- 206 (420)
T ss_pred hhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccchhhhccc---------------h--hc-----
Confidence 89999999999998876 5899999988777666665555443321111000000 0 00
Q ss_pred hhhhhhhhccCcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhHhhcchhhh
Q 011743 255 LYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSV 334 (478)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 334 (478)
+ .+..++.+.... .+ .+.++......+.....+..+.+..+.+.
T Consensus 207 --------------~---~~~~~~~~~~~~------------------l~-~~~~~~l~l~~~~~~~~~~~~~~~~~~~~ 250 (420)
T PRK09528 207 --------------N---ASAVSLKDALAL------------------LK-LPKFWFLVLYVIGVACFYDVFDQQFPNFF 250 (420)
T ss_pred --------------c---cccccHHHHHHH------------------cc-CCCeEeehHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000000000000 00 01111111112222222222222222222
Q ss_pred hhhcccCCCCCCcccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011743 335 TQGAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKR 414 (478)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~ 414 (478)
.+... +...+ ....+.+..++.+...+..++.+++.+++.+| +.+..+.++.+++.....+.
T Consensus 251 ~~~~~-~~~~~--~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~-----------~~~~~~~~l~~~~~~l~~~~---- 312 (420)
T PRK09528 251 ASFFA-TPEQG--TRVFGYLNSFQVFLEALIMFFAPFIINRIGAK-----------NALLLAGTIMAVRIIGSGFA---- 312 (420)
T ss_pred HHHHh-ccCcc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-----------hhhHHHHHHHHHHHHHHHhc----
Confidence 11111 10100 11123444445556666677777665554333 44667777777776666554
Q ss_pred HhhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHH-HHHHhhcc
Q 011743 415 RNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHL-HFCHCHLA 476 (478)
Q Consensus 415 ~~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~-~~~~~~lg 476 (478)
.+.++++...++.+++.....+...+++.+..|++.+++..+. +++..++|
T Consensus 313 -----------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg 364 (420)
T PRK09528 313 -----------TGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLG 364 (420)
T ss_pred -----------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHH
Confidence 3556677778888888888888888999999999999887554 44444443
No 63
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.84 E-value=2e-18 Score=182.22 Aligned_cols=180 Identities=12% Similarity=0.055 Sum_probs=133.6
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcc----cccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFK----NEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGT 90 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~----~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~ 90 (478)
+.+....+..+...+....+....+..-. .+.+.+..+.+++.+.+.++..++.++.|+++|| +|||+++.++.+
T Consensus 16 ~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~-~Grr~~~~~~~~ 94 (502)
T TIGR00887 16 RAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADK-LGRKRVYGMELI 94 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hccHHHHHHHHH
Confidence 34444444445544443333333332211 1234566778999999999999999999999999 899999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHH
Q 011743 91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF 170 (478)
Q Consensus 91 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~ 170 (478)
+..++.+++..+.... ...+...++++|+++|++.|+..+..+.+++|.+|+++ |+++.++
T Consensus 95 ~~~v~~~~~~~~~~~~-------------~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~------Rg~~~~~ 155 (502)
T TIGR00887 95 IMIIATVASGLSPGSS-------------PKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKW------RGAMMAA 155 (502)
T ss_pred HHHHHHHHHHHccCcc-------------cchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhh------HHHHHHH
Confidence 9999988777653100 00136789999999999999999999999999999988 9999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhc-----------------------cchhHHHHHHHHHHHHHHHHHHH
Q 011743 171 YLFATTLAAMIGVTAIVYVFI-----------------------DQGWWLGFLISSVATLIGLIALA 214 (478)
Q Consensus 171 ~~~~~~~g~~~~p~i~~~l~~-----------------------~~~~~~~f~i~~~~~~~~~~~~~ 214 (478)
.+....+|..+++.++.++.. ..+||+.|.+.++..++..+..+
T Consensus 156 ~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~ 222 (502)
T TIGR00887 156 VFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRL 222 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999887765421 24799999877766555444433
No 64
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.84 E-value=1.7e-18 Score=174.36 Aligned_cols=332 Identities=10% Similarity=0.031 Sum_probs=196.9
Q ss_pred HHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhc----cchhHHH-HHHHHHHHHHHHHHHHHhhcccCCC
Q 011743 36 ISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY----LSRFATC-LVFGTLEVLSLVMLTIQAYSKSLHP 110 (478)
Q Consensus 36 ~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~----~Gr~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~ 110 (478)
......+.+++|+|.++.+..... .+...+ .++.|.++||+ +||||.+ +.+.++.++....+.....
T Consensus 8 ~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~------ 79 (356)
T TIGR00901 8 GNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP------ 79 (356)
T ss_pred HhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc------
Confidence 333444556889999999999755 344443 88999999994 2999974 5666667666555544321
Q ss_pred CCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 011743 111 PDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF 190 (478)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~ 190 (478)
..+.+.+....++.+++.+...++..+++.|++|+++ |+++.++...+.++|..+++.+++.+.
T Consensus 80 ----------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~l~~~l~ 143 (356)
T TIGR00901 80 ----------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE------LGYGSTIYIVGYRAGMLLSGSLALVLA 143 (356)
T ss_pred ----------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1255566666777888888889999999999999877 899999999999999999999999888
Q ss_pred ccch--------hHHHHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhcCCCCCCCchhhhhhhhhh
Q 011743 191 IDQG--------WWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIE 262 (478)
Q Consensus 191 ~~~~--------~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (478)
...+ ||..|++.++..+++.+..++..++..+.++++++ + ..+..+
T Consensus 144 ~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~~~--~-------------------~~~~~~----- 197 (356)
T TIGR00901 144 SPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQEDASVPKP--L-------------------TQAVLK----- 197 (356)
T ss_pred hhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCcccccchh--H-------------------HHHHHH-----
Confidence 7777 99999998887766555544333321111100000 0 000000
Q ss_pred ccCcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHH--HHHHHHHHH-HHHHHHHHHhHhhcchhhhhhhcc
Q 011743 263 RVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEV--KILARMMPI-LASTIIMNTCLAQLQTLSVTQGAY 339 (478)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~ 339 (478)
. +.+ ..+++ ++++..+.. ++....++... .+.+.+... .+
T Consensus 198 ------------~--~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~-~g 240 (356)
T TIGR00901 198 ------------P--IRE---------------------FFQRKNMIQALLLLLLIVLYKLGDSAAT-VLTTLFLLD-MG 240 (356)
T ss_pred ------------H--HHH---------------------HHHhcCchHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-cC
Confidence 0 000 00000 112222211 11122222222 222222222 22
Q ss_pred cCCCCCCcccCCCCccCchh-HHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 011743 340 MDPRLGSIKVPTPSIPVLPL-LFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAF 418 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~-l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~ 418 (478)
.+.. ..+.+..... +..++..++..++.+++ ++++.+..+.++.+++.....+......+ .
T Consensus 241 ~~~~------~~g~~~~~~~~~~~~~g~~~~g~l~~r~-----------g~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~ 302 (356)
T TIGR00901 241 FSKE------EIALVAKINGLLGAILGGLIGGIIMQPL-----------NILYALLLFGIVQALTNAGFVWLASNGHH-D 302 (356)
T ss_pred CCHH------HHHHHhHHHHHHHHHHHHHHHHHHHhhh-----------hHHHHHHHHHHHHHHHHHHHHHHHhcCcc-c
Confidence 2211 1122222222 33445555555544443 44455677777666665544443111000 0
Q ss_pred cCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHhhc
Q 011743 419 NQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHL 475 (478)
Q Consensus 419 ~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~~l 475 (478)
+ ....+.+.+....++.+++++...+...++..+.+|+++||+++|+.++..++
T Consensus 303 -~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~ 356 (356)
T TIGR00901 303 -G--ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSAL 356 (356)
T ss_pred -c--cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHhC
Confidence 0 00124466677778889999999999999999999999999999999887653
No 65
>PRK15075 citrate-proton symporter; Provisional
Probab=99.84 E-value=2.5e-18 Score=178.04 Aligned_cols=172 Identities=15% Similarity=0.035 Sum_probs=123.3
Q ss_pred cchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHH-HHHHH-----HHHHHhhHHHHHhhhccchhHHHHH
Q 011743 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTL-TNFFG-----STFLLCLVGGFISDTYLSRFATCLV 87 (478)
Q Consensus 14 ~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~-~~~~~-----~~~~~~~~~G~laDr~~Gr~~~~~~ 87 (478)
++....+++..+++.+-.. ...+....+.++++.++.+.+... +.... ...++.++.|+++|| +||||.+..
T Consensus 14 ~~~~~~~~~~~~~~~~d~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr-~Grr~~l~~ 91 (434)
T PRK15075 14 ARAILRVTSGNFLEMFDFF-LFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDR-VGRRKGLIV 91 (434)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhh-hchHHHHHH
Confidence 3444444455555544443 334555577888998887754433 22222 123577899999999 899999999
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhH
Q 011743 88 FGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASY 167 (478)
Q Consensus 88 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~ 167 (478)
+.++..++.+++.++.+.+.+. ......++++|+++|++.|...++..++++|++|+++ |++.
T Consensus 92 ~~~~~~~~~~l~~~~~~~~~~~-----------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------rg~~ 154 (434)
T PRK15075 92 TLSIMASGTLLIAFVPGYATIG-----------LAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR------KGFY 154 (434)
T ss_pred HHHHHHHHHHHHHhCCcHHHHH-----------HHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc------chHH
Confidence 9999999999888764100000 0001256889999999999999999999999999988 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh--------ccchhHHHHHHHHH
Q 011743 168 FNFYLFATTLAAMIGVTAIVYVF--------IDQGWWLGFLISSV 204 (478)
Q Consensus 168 ~~~~~~~~~~g~~~~p~i~~~l~--------~~~~~~~~f~i~~~ 204 (478)
.++.....++|..+++.+++.+. +.+|||++|++.+.
T Consensus 155 ~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 155 TSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 99988888888888887776652 45799999987543
No 66
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.83 E-value=1.3e-18 Score=177.78 Aligned_cols=180 Identities=11% Similarity=-0.027 Sum_probs=135.5
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
|..|.+....++...++..+.++++.|+++++|+++.+.+++.+++.+...++.++.|+++|| +||||.++.+.+..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDK-LGLKKHLLWIISGLLV 80 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHH
Confidence 457778888888888888899999999999999999999999999999999999999999999 8999999988776665
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (478)
+..........+... .......++.+++.+++.+...|...++..|..+ + ++..++..+..
T Consensus 81 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~------~~~~~g~~~~~ 141 (396)
T TIGR00882 81 LFAPFFIYVFGPLLQ-----------SNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--N------SNFEYGKARMF 141 (396)
T ss_pred HHHHHHHHHhhhHHH-----------HHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--h------cccccchhhhh
Confidence 443322110000000 0123345666788888888888887776655322 1 34566777788
Q ss_pred HHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHh
Q 011743 175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 175 ~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~ 215 (478)
.++|..++|.+++.+.+ .+|+..|++.++..++..+..+.
T Consensus 142 ~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~ 181 (396)
T TIGR00882 142 GCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMF 181 (396)
T ss_pred cccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHH
Confidence 89999999999998865 69999999887776665544443
No 67
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.83 E-value=3.6e-18 Score=173.88 Aligned_cols=325 Identities=9% Similarity=-0.041 Sum_probs=202.7
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHH----HHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATC----LVFGTLE 92 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~----~~~~~~~ 92 (478)
.+.+.+..++...++-...+++|.|++ ++|+|..+.|++.+++.+...+++++.|.++|| +||++.. ..+..+.
T Consensus 6 ~~~l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~l~ 83 (382)
T TIGR00902 6 FRWLALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKD-ANHIIIALRLLALASAIF 83 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHH
Confidence 344555566666666667789999985 689999999999999999999999999999999 8985433 2222222
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHH
Q 011743 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (478)
Q Consensus 93 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~ 172 (478)
.+ .+...+ .+.+.+++.|.+++.+.+...|...++..+. +++ |++.++..+
T Consensus 84 ~~--~~~~~~-------------------~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~------~~~~~g~~~ 134 (382)
T TIGR00902 84 AA--AFSAGA-------------------HNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQ------FGLDYGKVR 134 (382)
T ss_pred HH--HHHHhh-------------------hhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHH------cCCCccHHH
Confidence 22 111122 2678888999999999888888887776443 223 788899999
Q ss_pred HHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhcCCCCCCCc
Q 011743 173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNP 252 (478)
Q Consensus 173 ~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (478)
...++|..++|.+++++.+.+|||..|++......+.+ .....+++ .++++++ .+.
T Consensus 135 ~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~---~~~~~~~------------------~~~-- 190 (382)
T TIGR00902 135 LIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFML-IGFLIKPT---IPPKDAI------------------PED-- 190 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH-HHHHcCCC---CCCCccc------------------ccc--
Confidence 99999999999999999998999999987655432222 22222111 0111000 000
Q ss_pred hhhhhhhhhhccCcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHH-HHHHHHHHHHhHhhcch
Q 011743 253 EELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMP-ILASTIIMNTCLAQLQT 331 (478)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~-~~~~~~~~~~~~~~~~~ 331 (478)
+ ..+..++. ++-..|+++..+. .++....+...+ .+.+
T Consensus 191 ----------------~--~~~~~~~~----------------------~~l~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 229 (382)
T TIGR00902 191 ----------------E--SQGDSAFI----------------------ALLKNPMNLRFLAAVCLIQGAHAAYY-GFSA 229 (382)
T ss_pred ----------------c--cccchhHH----------------------HHHcChHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 0 00000000 0001122222222 222222222222 2223
Q ss_pred hhhhhhcccCCCCCCcccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 011743 332 LSVTQGAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVE 411 (478)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~ 411 (478)
.+.+ ..+.+.. ..+.+..+..+..++..++ ..++.+| +++++.+.+|.++.++......+.
T Consensus 230 ~~l~-~~g~s~~------~~g~l~~~~~~~~i~~~~~----~~~l~~r-------~g~~~~l~~~~~~~~~~~~~~~~~- 290 (382)
T TIGR00902 230 IYWQ-AAGISAS------ATGLLWGIGVLAEIIIFAF----SNKLFQN-------CSARDLLLISAIACVGRWAIIGAI- 290 (382)
T ss_pred HHHH-HCCCCHh------HHHHHHHHHHHHHHHHHHH----hHHHHhh-------CCHHHHHHHHHHHHHHHHHHHHhH-
Confidence 3332 2222211 1222333333333333333 3334555 377778889999988888777665
Q ss_pred HHHHhhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHH
Q 011743 412 VKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFC 471 (478)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~ 471 (478)
.+++.+....++.++..++..+....++.+. |++++++++++++.
T Consensus 291 --------------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~ 335 (382)
T TIGR00902 291 --------------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNA 335 (382)
T ss_pred --------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHH
Confidence 3567677778999999999999999999988 99999999999863
No 68
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.83 E-value=1.4e-18 Score=200.68 Aligned_cols=155 Identities=12% Similarity=0.077 Sum_probs=127.0
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCch--hhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDI--AGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE 92 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~--~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 92 (478)
+....+++..++.+++..++...+..++..+++.+. ...+++.+++.+...++.+++|+++|| +|||++++++.++.
T Consensus 9 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr-~grk~~l~~~~~~~ 87 (1146)
T PRK08633 9 IGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADK-FSKNRVIRIVKLFE 87 (1146)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhccc-ccHHHHHHHHHHHH
Confidence 455556667777777666666666666666666554 346899999999999999999999999 89999999998877
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHH
Q 011743 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (478)
Q Consensus 93 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~ 172 (478)
+++.++..++.. ..+.+.+++.|+++|++.+...|+..++++|++|+++ |++++++..
T Consensus 88 ~~~~~~~~~~~~----------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~ 145 (1146)
T PRK08633 88 VGLTLLIVLAYY----------------LGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN------LSRANGLLE 145 (1146)
T ss_pred HHHHHHHHHHHH----------------HccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc------chhhhhHHH
Confidence 766655544321 1267889999999999999999999999999999988 999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcc
Q 011743 173 FATTLAAMIGVTAIVYVFID 192 (478)
Q Consensus 173 ~~~~~g~~~~p~i~~~l~~~ 192 (478)
.+.++|..+||.+++++.+.
T Consensus 146 ~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 146 AFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999988764
No 69
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.83 E-value=8.7e-19 Score=184.39 Aligned_cols=167 Identities=13% Similarity=0.172 Sum_probs=143.7
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHH
Q 011743 12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL 91 (478)
Q Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 91 (478)
.+++.+..+.+..++..+....+.+.+ .++.+++|.+..+.+++.+.+.++..++.++.|+++|| +|||+++.++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVL-TEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDR-YGRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHH
Confidence 345656666666666666665554444 56678999999999999999999999999999999999 8999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHH
Q 011743 92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (478)
Q Consensus 92 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~ 171 (478)
.+++.+++..+. +.+.+++.|++.|++.+...+...+++.|.+|+++ |++++++.
T Consensus 95 ~~~~~~~~~~~~-------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~ 149 (496)
T PRK03893 95 FSVGTLACGFAP-------------------GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL------RNKASGFL 149 (496)
T ss_pred HHHHHHHHHHHh-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHH
Confidence 999988887764 67888999999999999999999999999999877 89999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q 011743 172 LFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVA 205 (478)
Q Consensus 172 ~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~ 205 (478)
....++|..++|.+.+++.+..+|++.|++..+.
T Consensus 150 ~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~ 183 (496)
T PRK03893 150 ISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILP 183 (496)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 9999999999999999998889999999875443
No 70
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.83 E-value=5.7e-18 Score=172.79 Aligned_cols=172 Identities=13% Similarity=0.148 Sum_probs=144.2
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~ 96 (478)
+....+..+....+.....+.+|. +.+++|.+..+.++..+.+.++..++.++.|+++|| +||||.+..+.++..++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~lp~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr-~g~r~~l~~~~~~~~i~~ 82 (392)
T PRK10473 5 LLCSFALVLLYPAGIDMYLVGLPR-IAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADR-SGRKPVAIPGAALFIIAS 82 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHH-hCChHHHHHHHHHHHHHH
Confidence 444555666666666655555554 456799999999999999999999999999999999 899999999999999988
Q ss_pred HHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 011743 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (478)
+++..+. +...+++.|+++|++.+...+...+++.|.+|+++ |+++.++.+...+
T Consensus 83 ~~~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~ 137 (392)
T PRK10473 83 LLCSLAE-------------------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR------RAKVLSLLNGITC 137 (392)
T ss_pred HHHHHhC-------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHH
Confidence 8777653 56778889999999999989999999999999877 8999999999999
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHh
Q 011743 177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 177 ~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~ 215 (478)
+|..++|.+++.+.+..+|++.|++.++..++..+....
T Consensus 138 i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~ 176 (392)
T PRK10473 138 IIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLF 176 (392)
T ss_pred HHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998877789999999887776655554433
No 71
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.82 E-value=6.3e-19 Score=182.78 Aligned_cols=157 Identities=10% Similarity=0.051 Sum_probs=128.7
Q ss_pred HHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCC
Q 011743 37 SMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKS 116 (478)
Q Consensus 37 ~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 116 (478)
...+++++ .|+++.+.+++.+++.++..++.++.|+++|| +|||+.+..+.++.+++.+++......
T Consensus 48 ~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~----------- 114 (438)
T TIGR00712 48 LAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDR-SNPRVFLPAGLILSAAVMLLMGFVPWA----------- 114 (438)
T ss_pred hhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhc-cCCceehHHHHHHHHHHHHHHhccccc-----------
Confidence 34456665 59999999999999999999999999999999 899999999998888887776543210
Q ss_pred ccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhh-ccchh
Q 011743 117 SCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF-IDQGW 195 (478)
Q Consensus 117 ~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~-~~~~~ 195 (478)
..+...+++.|++.|++.|...+.....+.|++|+++ |++++++++...++|..++|.+.+.+. ...+|
T Consensus 115 ----~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w 184 (438)
T TIGR00712 115 ----TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------RGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDW 184 (438)
T ss_pred ----cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------chhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhh
Confidence 1256677888999999999999988899999999888 999999999999999999988776543 34689
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q 011743 196 WLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 196 ~~~f~i~~~~~~~~~~~~~~~ 216 (478)
|..|++.++..++..+..++.
T Consensus 185 ~~~f~~~~~~~~i~~~~~~~~ 205 (438)
T TIGR00712 185 HAALYFPAICAIIVALFAFAM 205 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999888776655444443
No 72
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.82 E-value=4.8e-19 Score=174.20 Aligned_cols=180 Identities=11% Similarity=0.047 Sum_probs=156.7
Q ss_pred ccCCcchhHHHHHHHHHHHHHHHHhH---HHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHH
Q 011743 10 QKGGFRACTFVFVLSALENMGFIANG---ISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCL 86 (478)
Q Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~v~---~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~ 86 (478)
.+.+.|-=+.++...++.-.+||-+. ....+++.++.++|.+|.|.+.+++.+.+.++-.+.|.++|| .+.|+.+-
T Consensus 20 ~~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr-~npr~fm~ 98 (448)
T COG2271 20 DKTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDR-SNPRYFMA 98 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhccc-CCCceeeh
Confidence 34445555666777777777777665 344578888999999999999999999999999999999999 89999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhh
Q 011743 87 VFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALAS 166 (478)
Q Consensus 87 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~ 166 (478)
+++++.++..+++..++ +...+.+..++.|..+|+-.|+....++.++++++ ||+
T Consensus 99 ~gLilsai~nil~Gfs~-------------------s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e------RG~ 153 (448)
T COG2271 99 FGLILSAIVNILFGFSP-------------------SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE------RGT 153 (448)
T ss_pred HHHHHHHHHHHHHhhhh-------------------HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc------cCc
Confidence 99999999999999875 78889999999999999999999999999999998 999
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HhhhccchhHHHHHHHHHHHHHHHHHHHh
Q 011743 167 YFNFYLFATTLAAMIGVTAI--VYVFIDQGWWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 167 ~~~~~~~~~~~g~~~~p~i~--~~l~~~~~~~~~f~i~~~~~~~~~~~~~~ 215 (478)
..++...+-|+|+.+.|.+. +++..+.+||..|++++++.++..++.+.
T Consensus 154 ~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~ 204 (448)
T COG2271 154 WWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLF 204 (448)
T ss_pred eEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 88888889999999999887554444443
No 73
>PRK10133 L-fucose transporter; Provisional
Probab=99.82 E-value=1e-17 Score=173.66 Aligned_cols=151 Identities=15% Similarity=0.058 Sum_probs=122.3
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
..+..+.+..+...+........+|.+ ++++|.++.+.++..+.+.++..++.++.|.++|| +||||++..+..++++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr-~G~r~~l~~g~~~~~~ 103 (438)
T PRK10133 26 IPFALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKK-LSYKAGIITGLFLYAL 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHH
Confidence 344555566666666666566666654 89999999999999999999999999999999999 8999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (478)
+.+++..... ..+...++++|+++|+|.|...+..++++.|..|+++ |...++.....
T Consensus 104 ~~~l~~~~~~----------------a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~------~~~~~s~~~~~ 161 (438)
T PRK10133 104 GAALFWPAAE----------------IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS------GHFRLNLAQTF 161 (438)
T ss_pred HHHHHHHHHh----------------cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhh------HHHHHHHHHHH
Confidence 9977642211 1277889999999999999999999999998755444 55567788888
Q ss_pred HHHHHHHHHHHHHhh
Q 011743 175 TTLAAMIGVTAIVYV 189 (478)
Q Consensus 175 ~~~g~~~~p~i~~~l 189 (478)
..+|..++|.+++.+
T Consensus 162 ~~~G~~~g~~~g~~l 176 (438)
T PRK10133 162 NSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888998888887654
No 74
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.81 E-value=3.5e-18 Score=197.36 Aligned_cols=344 Identities=10% Similarity=-0.004 Sum_probs=198.6
Q ss_pred HHHHHHhHHHHHHHcccccCCch-hhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHH--HHHHHHHHHHHhh
Q 011743 28 NMGFIANGISMVLYFKNEMHFDI-AGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL--EVLSLVMLTIQAY 104 (478)
Q Consensus 28 ~~~~~~v~~~l~~yl~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~--~~i~~~~~~~~~~ 104 (478)
++....+.......+.+..+.+. ...++..+++.+...++.+++|+++|| +|||+++...... ...+..+.....
T Consensus 28 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr-~~rk~~~~~~~~~~~~~~~~~~~~~~~- 105 (1140)
T PRK06814 28 NFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADK-YDKAKLAKILKFAEIGIAALAIYGFHL- 105 (1140)
T ss_pred HHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhh-ccHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 33333333333333444444433 446888889999999999999999999 8999986542222 222222222221
Q ss_pred cccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 011743 105 SKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVT 184 (478)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~ 184 (478)
.+.+.++++|+++|++.+...|+..+++.|++|+++ |++++++...+.++|.++||.
T Consensus 106 -----------------~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~------~~~a~~~~~~~~~ig~~igp~ 162 (1140)
T PRK06814 106 -----------------NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDE------LLGANALVEAGTFIAILLGTI 162 (1140)
T ss_pred -----------------hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccc------cchhhHHHHHHHHHHHHHHHH
Confidence 278889999999999999999999999999999988 999999999999999999999
Q ss_pred HHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhcCCCCCCCchhhhhhhhhhcc
Q 011743 185 AIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERV 264 (478)
Q Consensus 185 i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (478)
++|++....+|++.|+..++..++++++.....+. +..++..+..... .++.
T Consensus 163 l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----------------------~~~~----- 214 (1140)
T PRK06814 163 IGGLATISGNFVILVALLMGIAVLGWLASLFIPKT-GNAAPDLKIDRNI----------------------IRST----- 214 (1140)
T ss_pred HHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCC-CCCCCCCeeccch----------------------HHHH-----
Confidence 99999988899999855444444444433332221 1110000000000 0000
Q ss_pred CcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHH-HHHHHHHHHHhHhhcchhhhhhhcccCCC
Q 011743 265 GTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMP-ILASTIIMNTCLAQLQTLSVTQGAYMDPR 343 (478)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (478)
.+. + +.+...+.++..+. .++....+..... +.+.+.....+.+
T Consensus 215 --------------~~~-------------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~g~~-- 259 (1140)
T PRK06814 215 --------------ITL-------------L-----KYAKADKRIWLAILGISWFWLVGAVVLS-QLPLLAKETLGGD-- 259 (1140)
T ss_pred --------------HHH-------------H-----HHHhcCchHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHcCCc--
Confidence 000 0 00000111222221 1111122222222 2223332222222
Q ss_pred CCCcccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-C
Q 011743 344 LGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQS-P 422 (478)
Q Consensus 344 ~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~-~ 422 (478)
....+.+.....++.+++..+.+++. ++. ...+.+..+.++.++..+.+.+...+ ...... -
T Consensus 260 ----~~~~g~~~~~~~~g~~ig~~~~g~l~----~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~ 322 (1140)
T PRK06814 260 ----ENVATLFLAVFSVGVAVGSFLASKLS----EGR-------ITLLYVPIGALLMGLFGLDLAFASSS--VPAEPAQL 322 (1140)
T ss_pred ----hHHHHHHHHHHHHHHHHHHHHHHHHh----CCc-------eeeeeehHHHHHHHHHHHHHHhcccc--cccccccc
Confidence 11234455566677777776666643 221 11223444444444433333221000 000000 0
Q ss_pred ------CccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHhhcc
Q 011743 423 ------PKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 476 (478)
Q Consensus 423 ------~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~~lg 476 (478)
....+.+++.+.+++.|++.+...++..+++.+.+|++++|+++|++++...+|
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~ 382 (1140)
T PRK06814 323 KSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAF 382 (1140)
T ss_pred cchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHH
Confidence 001345667778888999999999999999999999999999999999887765
No 75
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.80 E-value=2e-17 Score=173.47 Aligned_cols=344 Identities=13% Similarity=0.061 Sum_probs=225.7
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~ 96 (478)
...+....++.+++.+....-++-++ .++.-|+...+++..+..+...++.+++|.++|| +.|||+++.+-++.++..
T Consensus 12 Fr~lw~a~~iS~lG~~~~~va~~wlv-~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr-~drrrili~~~~~~~~~~ 89 (524)
T PF05977_consen 12 FRRLWIAQLISNLGDWMQTVALAWLV-TQLTGSPLMVALVQAASTLPILLLSLFAGALADR-FDRRRILILSQLLRALVA 89 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccchHHHHHHHHHHHHHH
Confidence 44455566666666654444444343 3556688999999999999999999999999999 899999999998877766
Q ss_pred HHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 011743 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (478)
..+.+..... ..+.+.+++..++.|++.+...|+..+++.|.+|+++ ..++.++.....|
T Consensus 90 ~~L~~l~~~~--------------~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~------L~~A~al~s~~~n 149 (524)
T PF05977_consen 90 LLLAVLAFFG--------------LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED------LPAANALNSISFN 149 (524)
T ss_pred HHHHHHHHhC--------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh------HHHHHHHHHHHHH
Confidence 5555432110 2367888899999999999999999999999999888 8999999999999
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhcCCCCCCCchhhh
Q 011743 177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELY 256 (478)
Q Consensus 177 ~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (478)
+.-.+||.++|.+....|-.+.|.+.++..++.++.+...+++..++ ..+..+..+-+..
T Consensus 150 iar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~---~~~~e~~~~~l~~----------------- 209 (524)
T PF05977_consen 150 IARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPPS---SLPRERFFSALRE----------------- 209 (524)
T ss_pred HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc---ccchhhhhhhHHH-----------------
Confidence 99999999999998888999999999888776655544433321111 1110000000000
Q ss_pred hhhhhhccCcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhHhhcchhhhhh
Q 011743 257 EINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQ 336 (478)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 336 (478)
..+|.. ..+.+...+........+...+..+.+.+..+
T Consensus 210 ------------------G~ryv~------------------------~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~ 247 (524)
T PF05977_consen 210 ------------------GLRYVR------------------------SSPPLRSVLLRSFLFNLFASAVWALLPLFARD 247 (524)
T ss_pred ------------------HHHHHh------------------------cchHHHHHHHHHHHHHHhhhHHHHhhhHHHHH
Confidence 000110 01111111111111111111111122233222
Q ss_pred hcccCCCCCCcccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011743 337 GAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRN 416 (478)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~ 416 (478)
..+.+ ...-+.+....+++.++++.+..+ .+|. ++..+.+..+.++.+++++..++.
T Consensus 248 ~l~~~------a~~yGll~a~~gvGai~Gal~~~~-----l~~~------~~~~~lv~~~~~~~a~~~~~lal~------ 304 (524)
T PF05977_consen 248 VLGGG------ASGYGLLLAAFGVGAILGALLLPR-----LRRR------LSSRRLVLLASLLFALALLLLALS------ 304 (524)
T ss_pred HhCCc------HHHHHHHHHHHHHHHHHHHHHHHH-----hhcc------cCcchhhHHHHHHHHHHHHHHhcc------
Confidence 22222 111234444455555555544333 3332 355566777888888877777665
Q ss_pred hccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHhhcc
Q 011743 417 AFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 476 (478)
Q Consensus 417 ~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~~lg 476 (478)
.+.+...+.+++.|.+........++.+.+.+|+++||++++++.+....+
T Consensus 305 ---------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~ 355 (524)
T PF05977_consen 305 ---------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGG 355 (524)
T ss_pred ---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHH
Confidence 466777788899999999999999999999999999999999998766543
No 76
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.80 E-value=3e-17 Score=167.10 Aligned_cols=156 Identities=12% Similarity=-0.058 Sum_probs=118.6
Q ss_pred HHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchh----HHHHHHHHHHHHHHHHH
Q 011743 24 SALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRF----ATCLVFGTLEVLSLVML 99 (478)
Q Consensus 24 ~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~----~~~~~~~~~~~i~~~~~ 99 (478)
.++-..++..+.++++.|++ ++|.|..++|++.+++.+...++.++.|.++|| +||+ +.+.++..+.. ..+
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~---~~~ 87 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKD-PSQLIPALRLLALLTLLFA---VAF 87 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhh-hcchHHHHHHHHHHHHHHH---HHH
Confidence 33444555667788999985 589999999999999999999999999999999 8984 33332222221 111
Q ss_pred HHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHH
Q 011743 100 TIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAA 179 (478)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 179 (478)
.... .+.+.+++.|++.+++.+...|...++..++ +++ |++.++..+...++|.
T Consensus 88 ~~~~------------------~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~------~~~a~~~~~~~~~lg~ 141 (382)
T PRK11128 88 WFGA------------------HSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQ------IGLDYGKVRLWGSIAF 141 (382)
T ss_pred HHhc------------------ccHHHHHHHHHHHHHHHcccccHHHHHHHHH--Hhh------ccCCcchHHHHHHHHH
Confidence 1111 2678888899999999999999888877765 223 6778888888889999
Q ss_pred HHHHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 011743 180 MIGVTAIVYVFIDQGWWLGFLISSVATLIGL 210 (478)
Q Consensus 180 ~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~ 210 (478)
.+||.+++++.+++|||..|++.++..++..
T Consensus 142 ~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~ 172 (382)
T PRK11128 142 VIGSALTGKLVSWFGEQAILWILTAGVASML 172 (382)
T ss_pred HHHHHHHHHHHHHcChhHHHHHHHHHHHHHH
Confidence 9999999999998999999987776544433
No 77
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.80 E-value=1.9e-17 Score=167.64 Aligned_cols=156 Identities=15% Similarity=0.157 Sum_probs=113.9
Q ss_pred HHHHHcccccC--CchhhHhHHHHH-----HHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 011743 37 SMVLYFKNEMH--FDIAGASNTLTN-----FFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLH 109 (478)
Q Consensus 37 ~l~~yl~~~lg--~~~~~~~~~~~~-----~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 109 (478)
+...++.++.. .+.++.+.+.+. ..+...++.++.|+++|| +||||++..+.++..++.+++..+.+.+...
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~ 92 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDR-IGRKKTLVITLLMMGIGTLLIGLLPSYATIG 92 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhh-hhhHHHHHHHHHHHHHHHHHHhhCCChhhhH
Confidence 34445555543 344555544433 223334678999999999 8999999999999999988887664210000
Q ss_pred CCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Q 011743 110 PPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYV 189 (478)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l 189 (478)
......++++|+++|++.+...+...+++.|.+|+++ |++..++...+..+|..+++.+++.+
T Consensus 93 -----------~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~G~~i~~~~~~~~ 155 (394)
T TIGR00883 93 -----------IWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK------RGFYGSFQQVGAPVGLLLAALTVLLL 155 (394)
T ss_pred -----------HHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc------chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0012457889999999999999999999999999888 89999999999999999998877655
Q ss_pred h--------ccchhHHHHHHHHHHHHHHH
Q 011743 190 F--------IDQGWWLGFLISSVATLIGL 210 (478)
Q Consensus 190 ~--------~~~~~~~~f~i~~~~~~~~~ 210 (478)
. +..+||+.|++.++..+++.
T Consensus 156 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 184 (394)
T TIGR00883 156 SYLLGDDALLEWGWRIPFLVSAVLVLIGL 184 (394)
T ss_pred HHhcCHHHhhccchHHHHHHHHHHHHHHH
Confidence 3 34689999988776655443
No 78
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.80 E-value=1.3e-17 Score=172.50 Aligned_cols=343 Identities=13% Similarity=0.053 Sum_probs=207.8
Q ss_pred HHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhc---cchhH-HHHHHHHHHHHHHHH
Q 011743 23 LSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY---LSRFA-TCLVFGTLEVLSLVM 98 (478)
Q Consensus 23 ~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Gr~~-~~~~~~~~~~i~~~~ 98 (478)
..+..++.+..+..+++.|+++++|+++.++|.+.++..+...+..|+.|+++||. +|||| .++++....+++.++
T Consensus 7 g~~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~ 86 (437)
T TIGR00792 7 GDFGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVL 86 (437)
T ss_pred chHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHH
Confidence 34556666677778899999999999999999999999999999999999999972 67755 566777788877776
Q ss_pred HHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHH
Q 011743 99 LTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLA 178 (478)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 178 (478)
+..... .. .......+++.+++.+++.+...++..++..|..++++ | |++..++.....++|
T Consensus 87 ~~~~~~---~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~--~---R~~~~~~~~~~~~~g 148 (437)
T TIGR00792 87 LFTTPD---FS----------ATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPR--E---RESLSTFRRFGATLG 148 (437)
T ss_pred HHhCCC---CC----------cchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHH--H---HHHHHHHHHHHHHHH
Confidence 654421 00 01135666777888899989888888899999875432 1 778888888888888
Q ss_pred HHHHHHHHHhhh-------ccchhHHHHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhcCCCCCCC
Q 011743 179 AMIGVTAIVYVF-------IDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDN 251 (478)
Q Consensus 179 ~~~~p~i~~~l~-------~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (478)
..+++.+.+.+. +..+|++.+.+.+++.++..+......++.+++++++++ +
T Consensus 149 ~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~-------------------~-- 207 (437)
T TIGR00792 149 GLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIE-------------------K-- 207 (437)
T ss_pred HHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcccc-------------------c--
Confidence 777666554443 245899999888877666655544433321110000000 0
Q ss_pred chhhhhhhhhhccCcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhHhhcch
Q 011743 252 PEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQT 331 (478)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 331 (478)
+ .+..+..+ .+...|.+...+..................
T Consensus 208 -----------------~------~~~~~~~~------------------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (437)
T TIGR00792 208 -----------------K------LSLKQIFK------------------ALFKNDQLLILCLAYLFYNLAFNIKNGVQV 246 (437)
T ss_pred -----------------C------CCHHHHHH------------------HHhCCHHHHHHHHHHHHHHHHHHHHcchhh
Confidence 0 00000000 000011121121111111111111111111
Q ss_pred hhhhhhcccCCCCCCcccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 011743 332 LSVTQGAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVE 411 (478)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~ 411 (478)
.+.... .+ + ....+.+..+..+..++..++..++.+++ ++++.+..|.++.+++++...+..
T Consensus 247 ~~~~~~--~~-~----~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-----------g~~~~~~~~~~~~~~~~~~~~~~~ 308 (437)
T TIGR00792 247 YYFTYV--LG-D----PELFSYMGSIAIVAGLIGVLLFPRLVKKF-----------GRKILFAGGILLMVLGYLIFFFAG 308 (437)
T ss_pred eeEeee--cC-C----hHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------CcHHHHHHHHHHHHHHHHHHHHcc
Confidence 111111 11 0 11112233344566666666666654433 334556777777777766555431
Q ss_pred HHHHhhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCC-------cchhHHHHHHHHHHhhccC
Q 011743 412 VKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAP-------AGMRTLLLHLHFCHCHLAT 477 (478)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP-------~~~~g~~~g~~~~~~~lg~ 477 (478)
.+.+.+....++.+++.+...+..++...+.+| ++.+|.++|++++...+|+
T Consensus 309 --------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~ 367 (437)
T TIGR00792 309 --------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQ 367 (437)
T ss_pred --------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHH
Confidence 133445566678889999999999999888875 5678999999998877764
No 79
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.79 E-value=1.3e-17 Score=167.86 Aligned_cols=149 Identities=11% Similarity=0.079 Sum_probs=123.1
Q ss_pred HhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 011743 33 ANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPD 112 (478)
Q Consensus 33 ~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 112 (478)
.....+.+.+.+++|++..+++++.+.+.++..++.++.|+++|| +||||++.++.++..++.+.. .+.
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~-~~~--------- 85 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARR-FGEERSVAAGLLLIAAGILIR-SAP--------- 85 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hCchHHHHHHHHHHHHHHHHH-Hhc---------
Confidence 333334445678999999999999999999999999999999999 899999999998888777665 332
Q ss_pred CCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 011743 113 CGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID 192 (478)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~ 192 (478)
+.+.+++.|++.|+|.+...+..+..+.|.+| ++ |+++.++.....++|..+++.+++.+.+.
T Consensus 86 ----------~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~i~~~~~~~l~~~ 148 (355)
T TIGR00896 86 ----------GTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QR------VGLMTGLYSMALMGGAALAAAATVPLAQH 148 (355)
T ss_pred ----------cHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-ch------hhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56778899999999999988888888888886 45 88999999999999999999998888765
Q ss_pred c--hhHHHHHHHHHHHHHH
Q 011743 193 Q--GWWLGFLISSVATLIG 209 (478)
Q Consensus 193 ~--~~~~~f~i~~~~~~~~ 209 (478)
. +||..|.+.++..++.
T Consensus 149 ~~~~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 149 SGGHWQQALAWWALPALLA 167 (355)
T ss_pred hhhhHHHHHHHHHHHHHHH
Confidence 4 3999888766544433
No 80
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.79 E-value=1.2e-17 Score=172.49 Aligned_cols=334 Identities=15% Similarity=0.101 Sum_probs=220.2
Q ss_pred ccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhH
Q 011743 45 EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIA 124 (478)
Q Consensus 45 ~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (478)
+++++..+-+++.+.+..+..++++.+|+++|| +|-|+++..+.++.+++.++.+.+.. .+.
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k-~G~r~v~~~~~~~sa~~t~l~P~aa~-----------------~~~ 128 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADK-FGARRVFFISGLISALLTLLTPLAAS-----------------IGF 128 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHH-cCchHHHHHHHHHHHHHHHHHHHHHH-----------------hcc
Confidence 688899999999999999999999999999999 89999999999999999999998862 355
Q ss_pred HHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhcc-chhHHHHHHHH
Q 011743 125 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID-QGWWLGFLISS 203 (478)
Q Consensus 125 ~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~-~~~~~~f~i~~ 203 (478)
+.+++.|+++|++.|...|++..+.+++.|+++ |++..+..+.+..+|.+++-.++|++.+. .||+..|++.+
T Consensus 129 ~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g 202 (466)
T KOG2532|consen 129 YLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNE------RSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFG 202 (466)
T ss_pred hhhHHHHHHhHHHHhHHHhhhhceeeeECCHHH------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHH
Confidence 578899999999999999999999999999988 99999999999999999999999999988 89999999999
Q ss_pred HHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhcCCCCCCCchhhhh--hhhhhccCcccccCCCCccchhhh
Q 011743 204 VATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYE--INKIERVGTEERIPHTNQFRCLDK 281 (478)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 281 (478)
++.++..+++.+.-.+ .|++++. .+++|... .++.+.. ..+
T Consensus 203 ~~g~i~~~~w~~~~~d----~P~~h~~-------------------is~~El~~I~~~k~~~~-----~~~--------- 245 (466)
T KOG2532|consen 203 IVGLIWFILWFLFYSD----SPSKHPN-------------------ISEKELKYIEKGKSEAH-----VKK--------- 245 (466)
T ss_pred HHHHHHHHHHHHHhcC----CcccCCC-------------------CCHHHHHHHHhcccccc-----cCC---------
Confidence 9888777776654332 2222210 01111111 1100000 000
Q ss_pred hccCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhHhhcchhhhhhhcccCCCCCCcccCCCCccCchhHH
Q 011743 282 AAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGAYMDPRLGSIKVPTPSIPVLPLLF 361 (478)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 361 (478)
..+.||+..-. ...++....-..+-........++.+.|..+..+.| ...++.+..++.+.
T Consensus 246 --------~~~vP~~~i~t-----s~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~------v~~~G~~salP~l~ 306 (466)
T KOG2532|consen 246 --------KPPVPYKAILT-----SPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFD------VRETGFLSALPFLA 306 (466)
T ss_pred --------CCCCCHHHHHc-----CHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCC------hhhhhHHHHHHHHH
Confidence 01345542111 111111111111111112223333445555555666 33678888899999
Q ss_pred HHHHHHhhhhHHHHHhhhhcCCCCCCChhHHH--HHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHH
Q 011743 362 MAILIPIYEFLFVPFARKITGHPAGITQLQRV--GVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFG 439 (478)
Q Consensus 362 ~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g 439 (478)
..+...+.+.+.|++.+|.. .....+|+ .+++...++.++.+++... ...+..+.+...+
T Consensus 307 ~~~~k~~~g~lsD~l~~~~l----s~t~~rkifn~i~~~~~ai~l~~l~~~~~--------------~~~~~a~~~l~~~ 368 (466)
T KOG2532|consen 307 MAIVKFVAGQLSDRLTFRIL----SETTVRKIFNTIAFGGPAVFLLVLAFTSD--------------EHRLLAVILLTIA 368 (466)
T ss_pred HHHHHHHHHHHHHHHhhccC----chHhHHHHHHhHHHHHHHHHHHeeeecCC--------------CcchHHHHHHHHH
Confidence 99999999999888766621 12444455 4455555555555555421 0112233333333
Q ss_pred HHHHhhhhhhhhhhhcc-CCcchhHHHHHHHHHHhhccC
Q 011743 440 IADMFTFVGLLEFFYKE-APAGMRTLLLHLHFCHCHLAT 477 (478)
Q Consensus 440 ~ge~~~~p~~~~~~~~~-aP~~~~g~~~g~~~~~~~lg~ 477 (478)
.+.......+...-... + +++-+..+|+.+....+++
T Consensus 369 ~~~~g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~ 406 (466)
T KOG2532|consen 369 IGLSGFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAG 406 (466)
T ss_pred HHHcccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHH
Confidence 33333333333333333 5 4558899999988877653
No 81
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.78 E-value=3.6e-16 Score=160.65 Aligned_cols=173 Identities=14% Similarity=0.099 Sum_probs=138.8
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~ 96 (478)
.+.++...+...+.+....+.+ ..+++++|++..+.|++.+.+.++..++.++.|++.|| +||||++..+.++++++.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~-~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r-~G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMV-PQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKK-LSYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHH
Confidence 4445555555555544333444 45688999999999999999999999999999999999 899999999999999998
Q ss_pred HHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 011743 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (478)
.++..+.. ..+.+.+++.|++.|+|.|...+..++++.+..|+++ |++..++.+...+
T Consensus 83 ~l~~~~~~----------------~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 140 (410)
T TIGR00885 83 FLFWPAAE----------------IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPEST------ATRRLNLAQSFNP 140 (410)
T ss_pred HHHHHHHh----------------hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH------HHHHHHHHHHHHH
Confidence 77654421 2267888999999999999999999999999988776 7788888888999
Q ss_pred HHHHHHHHHHHhhhc--------------------------cchhHHHHHHHHHHHHHHHHHH
Q 011743 177 LAAMIGVTAIVYVFI--------------------------DQGWWLGFLISSVATLIGLIAL 213 (478)
Q Consensus 177 ~g~~~~p~i~~~l~~--------------------------~~~~~~~f~i~~~~~~~~~~~~ 213 (478)
+|..++|.+++.+.. ..+||++|++.+++.++..+++
T Consensus 141 lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 141 FGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred HHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998887642 1369999988777655444333
No 82
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.78 E-value=1e-16 Score=158.15 Aligned_cols=351 Identities=11% Similarity=-0.027 Sum_probs=230.6
Q ss_pred ccCCcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHH
Q 011743 10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG 89 (478)
Q Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~ 89 (478)
++..+|.++...+ .+...+.-+.+...+..++++++|+|+.|.+++..+..+...+..++-|.+.|| +|.||+..+++
T Consensus 9 k~~~~~~L~~S~~-af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~dr-fGgR~~~~~s~ 86 (417)
T COG2223 9 KRIARRNLWLSTL-AFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDR-FGGRKWTILSM 86 (417)
T ss_pred ccchhHHHHHHHH-HHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcc-cCchHHHHHHH
Confidence 3456676765444 455556667788888899999999999999999999999999999999999999 89999999999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHH
Q 011743 90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (478)
Q Consensus 90 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~ 169 (478)
++..+-.+.+.++... .+.+.+++...+.|++ |...+...+.++++||+++ ++.+.+
T Consensus 87 ~l~~IP~~~~~~a~~~----------------~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~------qG~AlG 143 (417)
T COG2223 87 LLLLIPCLGLAFAVTY----------------PSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEK------QGLALG 143 (417)
T ss_pred HHHHHHHHHHHHHccC----------------CchHHHHHHHHHHhcc-cceehcccccccccCChhh------hhHHHH
Confidence 9999999888887631 2447888889999998 6667788889999999998 899999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccch---hHHHHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhcCC
Q 011743 170 FYLFATTLAAMIGVTAIVYVFIDQG---WWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKL 246 (478)
Q Consensus 170 ~~~~~~~~g~~~~p~i~~~l~~~~~---~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (478)
++. ..|+|..+...++..+....+ |+....+..+.++++.+..++..++.++.++..++...
T Consensus 144 I~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~-------------- 208 (417)
T COG2223 144 IAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP-------------- 208 (417)
T ss_pred Hhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch--------------
Confidence 999 899999999999998888888 99999888888888777777665543332221111000
Q ss_pred CCCCCchhhhhhhhhhccCcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhH
Q 011743 247 SLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCL 326 (478)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~ 326 (478)
+ .++ .+...++.|.+..+......-.+.+
T Consensus 209 ----------~--------------------~~~---------------------~v~~~~~~W~lsllY~~tFG~Fvgf 237 (417)
T COG2223 209 ----------A--------------------QLK---------------------AVFSNKDTWLLSLLYFATFGGFVGF 237 (417)
T ss_pred ----------h--------------------HHH---------------------HHhcCcchHHHHHHHHHHHHHHHHH
Confidence 0 000 0111222333333333333323333
Q ss_pred hhcchhhhhhhcccCCCCCCcccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHH
Q 011743 327 AQLQTLSVTQGAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTI 406 (478)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~ 406 (478)
..+.+.+.......+ ....+.+....++...+.-|+-+.+.||+ +..+.....+..++++...
T Consensus 238 s~~l~~~~~~~fg~~------~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-----------Gg~rv~~~~f~~~~~~~~~ 300 (417)
T COG2223 238 SAYLPMYLVTQFGLS------PVTAGLIAFLFPLIGALARPLGGWLSDRI-----------GGRRVTLAVFVGMALAAAL 300 (417)
T ss_pred HHHHHHHHHHhcCCC------hhhHHHHHHHHHHHHHHHHhccchhhhhc-----------cchhHHHHHHHHHHHHHHH
Confidence 333332222212222 22233455555555556666666655544 4455566666666666655
Q ss_pred HHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHhhccC
Q 011743 407 AGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 477 (478)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~~lg~ 477 (478)
....... ++ ...+.+.....++.+.+..++-+...+..+..+.|+ +-|.+.|+-....++|+
T Consensus 301 l~~~~~~------~~--~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGG 362 (417)
T COG2223 301 LSLFLTG------FG--HGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGG 362 (417)
T ss_pred HHccccc------cc--cCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccc
Confidence 5544211 00 012334334444444444444455566666666655 68888898888888875
No 83
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.78 E-value=2.5e-16 Score=161.75 Aligned_cols=179 Identities=13% Similarity=-0.048 Sum_probs=136.1
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHccc-ccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKN-EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 93 (478)
|.++...+ .+...+..+.+...+...+.+ ++|++..|.+++.+++.+...++.++.|++.|| +|.|+++.++.++..
T Consensus 34 r~l~~s~~-~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr-~G~R~v~~~~~ll~~ 111 (462)
T PRK15034 34 RNLWISVS-CLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPI-FGGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHH
Confidence 54554433 455555555566666666655 899999999999999999999999999999999 899999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHH
Q 011743 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (478)
Q Consensus 94 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~ 173 (478)
+..+++..+.... .++...+++.|++.|++ |...+.....+++++|+++ |+++.++...
T Consensus 112 i~~~~~~~a~~~~--------------~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~------rG~A~Gi~~g 170 (462)
T PRK15034 112 IPCVWLGIAVQNP--------------NTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAK------QGSALGINGG 170 (462)
T ss_pred HHHHHHHHHHccc--------------CCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhH------hHHHHHHHHH
Confidence 9888887651000 12788999999999998 7788889999999999888 9999999976
Q ss_pred HHHHHHHHHHHHHHhhh-----c-------------cchhHHHHHHHHHHHHHHHHHHHhc
Q 011743 174 ATTLAAMIGVTAIVYVF-----I-------------DQGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 174 ~~~~g~~~~p~i~~~l~-----~-------------~~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
..|+|..+++.++..+. + ..+|+..+++..+..+++.++.++.
T Consensus 171 ~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 171 LGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 67777766655554322 1 3457777777777766666555554
No 84
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.77 E-value=2.1e-16 Score=163.43 Aligned_cols=393 Identities=12% Similarity=0.031 Sum_probs=234.8
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhh---ccchhHHHHHH-HHH
Q 011743 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDT---YLSRFATCLVF-GTL 91 (478)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr---~~Gr~~~~~~~-~~~ 91 (478)
.+..+....+.-++++-...++++.|+ +++|++..+++.+..+..+...+.+|+.|+++|| .+||||.++.+ .+.
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~ 83 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHH
Confidence 355566667777777776777888776 6799999999999999999999999999999993 38999998876 455
Q ss_pred HHHHHHHHHHHhhccc-CCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHH
Q 011743 92 EVLSLVMLTIQAYSKS-LHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF 170 (478)
Q Consensus 92 ~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~ 170 (478)
.+++..+++.+..... +.+..-+.+ +.......+++..+..++....++...++++|.+|+++++ ++.++++
T Consensus 84 ~~~~l~ll~~~~~~~~~~~~~~~~~~---~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~----~~~a~~~ 156 (477)
T TIGR01301 84 VAFAVILIGFAADIGHLFGDNLDKKT---KPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARR----TRIANAY 156 (477)
T ss_pred HHHHHHHHHhCchhhhhccccccccc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHH----HHHHHHH
Confidence 5566666655432110 000000000 0112244455555666788888888999999999987622 4679999
Q ss_pred HHHHHHHHHHHHHHHHHhh--hcc-------------chhHHHHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHH
Q 011743 171 YLFATTLAAMIGVTAIVYV--FID-------------QGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQ 235 (478)
Q Consensus 171 ~~~~~~~g~~~~p~i~~~l--~~~-------------~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (478)
.....++|..+|+.++++. .+. .+.+..|++.+++.+++.++..+..++.+..++++.+.
T Consensus 157 ~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~----- 231 (477)
T TIGR01301 157 FSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFIN----- 231 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchh-----
Confidence 9999999999999988864 111 16789999988888887777766544422111111000
Q ss_pred HHHHHHHhcCCCCCCCchhhhhhhhhhccCcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHHH
Q 011743 236 VIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPI 315 (478)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~ 315 (478)
++..+.+ +.+. ...++.+-+...+--|.+.+.+..
T Consensus 232 -----------------~~~~~~~------------~~~~----------------~~~~~~i~~~~~~mP~~m~~l~~v 266 (477)
T TIGR01301 232 -----------------SEAAPPS------------KHGE----------------EAFFGELFGAFKYLPRPVWILLLV 266 (477)
T ss_pred -----------------hhccccc------------ccch----------------hhhHHHHHHHHHHCCHHHHHHHHH
Confidence 0000000 0000 000000000001112344556666
Q ss_pred HHHHHHHHHhHhhcchhhhhhhcccCCCCCCcccCCC-----CccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChh
Q 011743 316 LASTIIMNTCLAQLQTLSVTQGAYMDPRLGSIKVPTP-----SIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQL 390 (478)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~ 390 (478)
.++....|..+..+.|.++-+...-..+-.+-....+ +-...+.+... +...++.++.||. +.+
T Consensus 267 qffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~----i~s~~l~~l~~~~-------g~~ 335 (477)
T TIGR01301 267 TCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLG----ITSIGMEKLCRGW-------GAG 335 (477)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHh-------ccc
Confidence 6777777777777777665543221111000000000 11112222222 3334444455553 322
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHhhcc---CCCC--ccch-HHHHHHHHHHHHHHHHhhhhhhhhhhhccCCc--ch
Q 011743 391 QRV-GVGLVLSVISMTIAGFVEVKRRNAFN---QSPP--KQIS-LFWLSFQYCIFGIADMFTFVGLLEFFYKEAPA--GM 461 (478)
Q Consensus 391 ~~i-~~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~-~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~--~~ 461 (478)
++. .++.++.++++....++.....+..+ ..+. .+.. .+.....+.+.|+.-.......++++.+..|+ +.
T Consensus 336 k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~ 415 (477)
T TIGR01301 336 KRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAG 415 (477)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCC
Confidence 333 78888888888888776432111100 0000 0112 36677888999999999999999999999995 55
Q ss_pred hHHHHHHHHHHhhccC
Q 011743 462 RTLLLHLHFCHCHLAT 477 (478)
Q Consensus 462 ~g~~~g~~~~~~~lg~ 477 (478)
+|.+||+.|++..+.+
T Consensus 416 ~G~~mgilN~~I~lpQ 431 (477)
T TIGR01301 416 QGLSMGVLNLAIVIPQ 431 (477)
T ss_pred CcchhhHHHHHHHHHH
Confidence 6999999999876543
No 85
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.77 E-value=2.2e-16 Score=166.98 Aligned_cols=353 Identities=14% Similarity=0.046 Sum_probs=217.8
Q ss_pred hHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHH
Q 011743 52 GASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSL 131 (478)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (478)
+.+++.++..+++.++.++.|.++|+ +|||++++++.+++.+|.+++..+. +..+++++|
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~-~GRk~~l~~~~~~~~iG~ii~~~a~-------------------~~~~l~~GR 149 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDR-IGRKKTLLLAVVLFLIGAIIIALAP-------------------SWYQLIVGR 149 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHhh-------------------hHHHHHHHH
Confidence 45899999999999999999999999 8999999999999999999999886 889999999
Q ss_pred HHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhcc-chhHHHHHHHHHHHHHHH
Q 011743 132 YLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID-QGWWLGFLISSVATLIGL 210 (478)
Q Consensus 132 ~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~-~~~~~~f~i~~~~~~~~~ 210 (478)
++.|+|.|+....++.+++|..|++. |+...+......++|..++..++....+. .+||..+.+..+..++..
T Consensus 150 ~l~G~g~G~~~~~~piy~sEiap~~~------RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~ 223 (513)
T KOG0254|consen 150 ILTGLGVGGASVLAPVYISEIAPAHI------RGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILA 223 (513)
T ss_pred HHhccchhhhhhcchhhHhhcCChhh------hHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999888 99999999999999999996555444332 489988888777666555
Q ss_pred HHHHhcCcceeecCCCCCchhHHHHHHHHHHHhcCCCCCCCchhhhhhhhhhccCcccccCCCCccchhhhhccCCCCCC
Q 011743 211 IALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDST 290 (478)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (478)
+. .+..++.++.-.+.....+..+.+. +-+..+..+.+.+..+...+...+ ...+...
T Consensus 224 ~~-~~~~pesp~~L~~~g~~~~a~~~l~---~l~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~--------------- 281 (513)
T KOG0254|consen 224 LG-MLFLPESPRWLIEKGRLEEAKRSLK---RLRGLSPEDVEVELELLKIKLLVE---AEVAEGK--------------- 281 (513)
T ss_pred HH-HHhCCCChHHHHHcCChHHHHHHHH---HHhCCCCcchHHHHHHHHHHHHHh---hhccccc---------------
Confidence 55 3333321111011111122222211 111111111111111100000000 0000000
Q ss_pred CCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhHhhcchhhhhhhcccCCCCCCcccCCCCccCchhHHHHHHHHhhh
Q 011743 291 AAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYE 370 (478)
Q Consensus 291 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~ 370 (478)
..|+++.. ...+|+....+.+..+++........+++....+..+.+.+ ......+..+..++...+..
T Consensus 282 --~~~~~l~~--~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~-------~~~~~~~~~~v~~~~t~~~~ 350 (513)
T KOG0254|consen 282 --ASWGELFS--PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSD-------TFLASIILGVVNFLGTLVAT 350 (513)
T ss_pred --ccHHHhcC--cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCc-------hHHHHHHHHHHHHHHHHHHH
Confidence 01111111 01234444445555555555555544455444444433322 12223333344444444445
Q ss_pred hHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhh
Q 011743 371 FLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLL 450 (478)
Q Consensus 371 ~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~ 450 (478)
.+.|+++|| ..++.|...+++++++.+.......+..... .......++..++........+.|..+
T Consensus 351 ~lvd~~gRr-----------~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~f~~g~g~v~w 417 (513)
T KOG0254|consen 351 YLVDRFGRR-----------KLLLFGAAGMSICLVILAVVGVFALYYPNSS--KGAGWLAIVFLCLFIFSFAIGWGPVPW 417 (513)
T ss_pred HHHHHhccH-----------HHHHHhHHHHHHHHHHHHHHHHHhccCCCcc--cchhHHHHHHHHHHHHHHhcccccchh
Confidence 666666555 4578888888888888877644322111000 013344455555666666777788888
Q ss_pred hhhhccCCcchhHHHHHHHHHHhhcc
Q 011743 451 EFFYKEAPAGMRTLLLHLHFCHCHLA 476 (478)
Q Consensus 451 ~~~~~~aP~~~~g~~~g~~~~~~~lg 476 (478)
.+..+..|.+.|+++.++....+.+.
T Consensus 418 ~~~sEifp~~~r~~~~s~~~~~n~~~ 443 (513)
T KOG0254|consen 418 VIVSEIFPLRLRSKGASLAVAVNWLW 443 (513)
T ss_pred hhhhccCcHhHHhhhHHHHHHHHHHH
Confidence 89999999999999999888877654
No 86
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.75 E-value=1.6e-15 Score=159.53 Aligned_cols=174 Identities=8% Similarity=0.085 Sum_probs=136.2
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhcc-----chhHH-HHHHH
Q 011743 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYL-----SRFAT-CLVFG 89 (478)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~-----Gr~~~-~~~~~ 89 (478)
..+.++...+......+.....++.|+.+ .|.+..+.+..... ... +++.++.|.++|| + ||||. +..+.
T Consensus 13 ~~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~~~~-~~~-~~~~~l~gpl~Dr-~~~~~~Grrr~~ll~~~ 88 (491)
T PRK11010 13 NSAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFFSLV-GQA-YVFKFLWSPLMDR-YTPPFLGRRRGWLLATQ 88 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHH-HHH-HHHHHHHHHHHHc-ccccCCCCchHHHHHHH
Confidence 35556666677777777777888888664 59999999986332 222 3688999999999 7 99986 55666
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHH
Q 011743 90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (478)
Q Consensus 90 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~ 169 (478)
+..+++...+..... ..+.+.+.+.+++.+++.+...+...++..|++|+++ |+++.+
T Consensus 89 i~~~~~~~~~a~~~~----------------~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~------rg~~~~ 146 (491)
T PRK11010 89 LLLLVAIAAMGFLEP----------------GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE------RGAGAA 146 (491)
T ss_pred HHHHHHHHHHHHcCC----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hHHHHH
Confidence 667677666655421 2367788888999999999999999999999999887 899999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhc-cchhHHHHHHHHHHHHHHHHHHHh
Q 011743 170 FYLFATTLAAMIGVTAIVYVFI-DQGWWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 170 ~~~~~~~~g~~~~p~i~~~l~~-~~~~~~~f~i~~~~~~~~~~~~~~ 215 (478)
+...+.++|..+++.+++++.+ ..|||..|++.++..++..+..+.
T Consensus 147 i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~ 193 (491)
T PRK11010 147 ISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL 193 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999988 469999999988776666554443
No 87
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.75 E-value=3.5e-16 Score=161.21 Aligned_cols=339 Identities=12% Similarity=0.067 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccch-hHHHHHHHHHHHHHHHH
Q 011743 20 VFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSR-FATCLVFGTLEVLSLVM 98 (478)
Q Consensus 20 l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr-~~~~~~~~~~~~i~~~~ 98 (478)
+.+..++...++-...++++.|+.+++|++..+.|++.+++.++..+++++.|.++|| +|| |+++.++.++.+++..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr-~g~~r~~~~~~~~~~~~~~~~ 85 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADK-WLSAQKVYAVCHFAGALLLFF 85 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccHHHHHHHHHHHHHHHHH
Confidence 4455556666666666999999999999999999999999999999999999999999 755 77888888777777666
Q ss_pred HHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCC--------CCCChhhhhhhhhHHHH
Q 011743 99 LTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQF--------DENDPKGAKALASYFNF 170 (478)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~--------~~~~~~~~~~r~~~~~~ 170 (478)
....+ +.+.+++.|++.+++.+...+...+...+.. .... |.+.++
T Consensus 86 ~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~------~~r~~G- 139 (418)
T TIGR00889 86 AAQVT-------------------TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFP------PIRVMG- 139 (418)
T ss_pred HHHhc-------------------CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCC------Ceeeeh-
Confidence 65543 5666777888888877666665544432221 1111 344443
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhcCCCCCC
Q 011743 171 YLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPD 250 (478)
Q Consensus 171 ~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (478)
.+|..++|.+++.+.....| .+|++.++..++..+..+.. ++.++ +++++..+ .
T Consensus 140 -----~lG~~ig~~l~g~l~~~~~~-~~f~~~~~~~~~~~~~~~~~-~e~~~--~~~~~~~~---------------~-- 193 (418)
T TIGR00889 140 -----TIGFIAAMWAVSLLDIELSN-IQLYITAGSSALLGVFALTL-PDIPV--AKSTAKMS---------------I-- 193 (418)
T ss_pred -----hHHHHHHHHHHHHhcccchh-HHHHHHHHHHHHHHHHHhcC-CCCCC--CccccccC---------------H--
Confidence 47888899988887432223 45666666555444433222 21110 00000000 0
Q ss_pred CchhhhhhhhhhccCcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhHhhcc
Q 011743 251 NPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQ 330 (478)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~ 330 (478)
.+. ...++.+ . .++++.....+..++........+ +..
T Consensus 194 ------~~~--------------~~~~~~~---~------------------~k~~~~~~~~~~~~~~~~~~~~~~-~~~ 231 (418)
T TIGR00889 194 ------KVM--------------LGLDAFI---L------------------FKNKRMAIFFFFSMLLGAPLQITN-IFG 231 (418)
T ss_pred ------HHH--------------hhhhHHH---H------------------hcCCCeeeHHHHHHHHHhHHHHHH-HhH
Confidence 000 0000000 0 000110111111111111111111 111
Q ss_pred hhhhhhhcccCCCCC-Cc-ccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 011743 331 TLSVTQGAYMDPRLG-SI-KVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAG 408 (478)
Q Consensus 331 ~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~ 408 (478)
+.+..+ .+.+.... ++ ....+....+..+..++...+.+++.+++ ++++.+.++.++.++++....
T Consensus 232 ~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-----------g~r~~l~~~~~~~~v~~~l~~ 299 (418)
T TIGR00889 232 NGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-----------GIKKVMLLSLVAWALRFGFFA 299 (418)
T ss_pred HHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-----------CcHHHHHHHHHHHHHHHHHHH
Confidence 222211 11111100 00 01113334444455555555555544433 445567788877777765554
Q ss_pred HHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHH-HHhhcc
Q 011743 409 FVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHF-CHCHLA 476 (478)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~-~~~~lg 476 (478)
..... ..+.+.+....++.+++++...+....++.+..|++.||+++|+.+ ...++|
T Consensus 300 ~~~~~-----------~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg 357 (418)
T TIGR00889 300 YGDPE-----------YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFG 357 (418)
T ss_pred HcCcc-----------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhH
Confidence 42100 0123445567788999999999999999999999999999999997 455555
No 88
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.74 E-value=4e-16 Score=159.79 Aligned_cols=353 Identities=10% Similarity=0.052 Sum_probs=209.2
Q ss_pred hHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHH
Q 011743 54 SNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYL 133 (478)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 133 (478)
+.+++++.++.+++..++|+++|| +|||+.++++.++..++.+++..+.. ..+..+++++|++
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~-~GRK~~l~~~~~l~~~~~~~~~~s~~----------------~~~~e~li~GR~i 125 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADR-FGRKNALLLSNLLAVLAALLMGLSKS----------------APSFEMLILGRLI 125 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-hcchHHHHHHHHHHHHHHHHHHHHHH----------------hhhHHHHHHHHHH
Confidence 678899999999999999999999 89999999999999998888877653 2378999999999
Q ss_pred HHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHH--hhhccchhHHHHHHHHHHHHHHHH
Q 011743 134 YSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIV--YVFIDQGWWLGFLISSVATLIGLI 211 (478)
Q Consensus 134 ~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~--~l~~~~~~~~~f~i~~~~~~~~~~ 211 (478)
.|+..|......+-++.|..|++. ||..-.+...+.++|..++..++. .+.+...|++.+.+..+..++.++
T Consensus 126 ~Gl~~gl~~~~~pmyl~E~sP~~~------RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~ 199 (485)
T KOG0569|consen 126 VGLACGLSTGLVPMYLTEISPKNL------RGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLA 199 (485)
T ss_pred HHHHhHHHHHHHHHHHhhcChhhh------ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998 999999999999999999966653 444556799999988887776666
Q ss_pred HHHhcCcceeecCCCCCchhHHHHHHHHHHHhcCCCCCCCchhhhhhhhhhccCcccccCCCCccchhhhhccCCCCCCC
Q 011743 212 ALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTA 291 (478)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (478)
...++.+-.+.--.+.++.++..+.+.. ++.+.. ++++.++++++ ...+ +.+..+..++.|.-
T Consensus 200 ~l~~~PESPk~Ll~~k~~~~~A~~sl~~-y~G~~~----~~~~~e~~~~e-~~~~--~~~~~~~~sl~~~~--------- 262 (485)
T KOG0569|consen 200 LLPFLPESPKYLLIKKGDEEEARKALKF-YRGKED----VEAEIEEMLRE-IEEE--ELEKKKQISLRQLL--------- 262 (485)
T ss_pred HHhcCCCCcchHHHHcCCHHHHHHHHHH-HhCCCc----chhHHHHHHHH-HHHh--ccccccCCcHHHHh---------
Confidence 6655433211110111222222222211 111111 01111111100 0000 00001111122210
Q ss_pred CCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhHhhcchhhhhhhcccCCCCCCcccCCCCccCchhHHHHHHHHhhhh
Q 011743 292 AAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEF 371 (478)
Q Consensus 292 ~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~ 371 (478)
.++ ..|+.+...+.+...+..-.......++.......++..+ ...+.........++...+...
T Consensus 263 -------~~~--~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~------~a~~an~~~g~v~~~~t~~~~~ 327 (485)
T KOG0569|consen 263 -------KNP--TLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPE------EAQYANLGIGIVNLLSTLVSPF 327 (485)
T ss_pred -------cCc--chhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 000 1122233333344444443444333444444443333311 1122222233444444444445
Q ss_pred HHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhh
Q 011743 372 LFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLE 451 (478)
Q Consensus 372 ~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~ 451 (478)
++++.+|| ..+++++.++.+..+.........+...+. .++..++..+......+....|..+-
T Consensus 328 lid~~gRR-----------pLll~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~y~~i~~~~~~~~~f~~G~gpi~~f 391 (485)
T KOG0569|consen 328 LIDRLGRR-----------PLLLISLSLMAVALLLMSIALFLSNSFGSW-----LSYLCIAAIFLFIISFAIGPGPIPWF 391 (485)
T ss_pred HHHhcCCc-----------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHHhhhcCCCchhHH
Confidence 55555555 446777777666666666554432221100 11222233333344455666899999
Q ss_pred hhhccCCcchhHHHHHHHHHHhhccC
Q 011743 452 FFYKEAPAGMRTLLLHLHFCHCHLAT 477 (478)
Q Consensus 452 ~~~~~aP~~~~g~~~g~~~~~~~lg~ 477 (478)
+.+|..|.+.|..++++..+.+.+.+
T Consensus 392 i~aELf~~~~R~aa~s~~~~~~w~~~ 417 (485)
T KOG0569|consen 392 IGAELFPQSARSAAQSVATAVNWLSN 417 (485)
T ss_pred HHHHhCCccchHHHHHHHHHHHHHHH
Confidence 99999999999999999888877654
No 89
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.71 E-value=6.8e-15 Score=150.79 Aligned_cols=162 Identities=10% Similarity=0.048 Sum_probs=127.6
Q ss_pred HHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhcc-----chhH-HHHHHHHHHHHHHHH
Q 011743 25 ALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYL-----SRFA-TCLVFGTLEVLSLVM 98 (478)
Q Consensus 25 ~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~-----Gr~~-~~~~~~~~~~i~~~~ 98 (478)
+.....+.-...-+|.|+++ .|++.++.|++..+... .+..++.|+++|| + |||| .+.++.++.+++...
T Consensus 9 ~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr-~~~~~~g~rr~~l~~~~~~~~l~~~~ 84 (402)
T PRK11902 9 FASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDR-YTPPLLGRRRGWLLLTQVGLAASIAA 84 (402)
T ss_pred HHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHc-ccccCCCcchhHHHHHHHHHHHHHHH
Confidence 33344444455678888875 59999999999777665 6999999999999 7 8876 677778888777776
Q ss_pred HHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHH
Q 011743 99 LTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLA 178 (478)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 178 (478)
+.+... ..+.+.+++..++.++..+...+...+++.|++|+++ |+++.++...+.++|
T Consensus 85 l~~~~~----------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------r~~~~~~~~~g~~~g 142 (402)
T PRK11902 85 MAFCPP----------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE------RGAGAAVKVLGYRLA 142 (402)
T ss_pred HHhcCc----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hhHHHHHHHHHHHHH
Confidence 665421 1256667777777888888899999999999999888 899999999999999
Q ss_pred HHHHHHHHHhhhcc-chhHHHHHHHHHHHHHHHHH
Q 011743 179 AMIGVTAIVYVFID-QGWWLGFLISSVATLIGLIA 212 (478)
Q Consensus 179 ~~~~p~i~~~l~~~-~~~~~~f~i~~~~~~~~~~~ 212 (478)
..+++.+++++.+. .|||..|++.++..++..+.
T Consensus 143 ~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 143 MLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 99999999888775 59999999988776555443
No 90
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.71 E-value=2.8e-15 Score=151.86 Aligned_cols=155 Identities=11% Similarity=0.030 Sum_probs=135.9
Q ss_pred HHHHHHHcccccCCchhh-HhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 011743 35 GISMVLYFKNEMHFDIAG-ASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDC 113 (478)
Q Consensus 35 ~~~l~~yl~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 113 (478)
.++...|+.+++|++..+ .|.+.++++.++.++.+++|+++|| +|.|+++.++++.+.+..+++.++.
T Consensus 45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDr-lG~K~vL~l~~l~Wsl~t~L~~fa~---------- 113 (511)
T TIGR00806 45 ESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDY-LRYKPVLVLQALSFVCVWLLLLLGT---------- 113 (511)
T ss_pred HHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHHHH----------
Confidence 356777999999999999 9999999999999999999999999 8999999999999999999998875
Q ss_pred CCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 011743 114 GKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ 193 (478)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~ 193 (478)
+...+.+.|++.|++.|... +...++..++|+++ |+++.++...+.++|.++++.+++++ ..+
T Consensus 114 ---------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kE------R~ratsi~~sg~~vG~~Ia~~L~qll-~s~ 176 (511)
T TIGR00806 114 ---------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSR------YQRAAAYSRAAVLLGVFLSSVLGQLL-VTL 176 (511)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc
Confidence 78899999999999999999 99999999999887 99999999999999999999999985 457
Q ss_pred hhHHHH---HHHHHHHHHHHHHHHhcC
Q 011743 194 GWWLGF---LISSVATLIGLIALAIGK 217 (478)
Q Consensus 194 ~~~~~f---~i~~~~~~~~~~~~~~~~ 217 (478)
||+.-+ +++.....+++++.++..
T Consensus 177 gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 177 GWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 887644 444555556666655543
No 91
>PRK09848 glucuronide transporter; Provisional
Probab=99.69 E-value=7e-15 Score=152.95 Aligned_cols=157 Identities=13% Similarity=0.035 Sum_probs=107.9
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhc---cchhHHH-HHHHHH
Q 011743 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY---LSRFATC-LVFGTL 91 (478)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Gr~~~~-~~~~~~ 91 (478)
..+.-....+.++..+..+.++++.|+++.+|+++.++|.+..+..+...+..|+.|+++||. +||||.. .++.+.
T Consensus 9 ~~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~ 88 (448)
T PRK09848 9 TIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAP 88 (448)
T ss_pred HHHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHH
Confidence 344444577778888887888999999999999999999999999999999999999999992 3777755 555555
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHH
Q 011743 92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (478)
Q Consensus 92 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~ 171 (478)
..+..+++..... . +. ........++...+.+++.+...++..++..+..++.+ | |.+..++.
T Consensus 89 ~~~~~~~~~~~~~--~-----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~--~---r~~~~~~r 151 (448)
T PRK09848 89 LMIFSVLVFWVPT--D-----WS-----HSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQ--S---RARLGAAR 151 (448)
T ss_pred HHHHHHHHHhCcC--C-----CC-----cchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHH--H---HHHHHHHH
Confidence 5554444322110 0 00 01134445556677888899999888888887776533 2 45555444
Q ss_pred HH-----HHHHHHHHHHHHHHhh
Q 011743 172 LF-----ATTLAAMIGVTAIVYV 189 (478)
Q Consensus 172 ~~-----~~~~g~~~~p~i~~~l 189 (478)
.. ..+++..++|.+.+..
T Consensus 152 ~~~~~~~~~~~~~~~~p~i~~~~ 174 (448)
T PRK09848 152 GIAASLTFVCLAFLIGPSIKNSS 174 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC
Confidence 33 3446666777766544
No 92
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.66 E-value=5.7e-14 Score=147.57 Aligned_cols=149 Identities=15% Similarity=0.104 Sum_probs=118.3
Q ss_pred HHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCC
Q 011743 37 SMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKS 116 (478)
Q Consensus 37 ~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 116 (478)
....++.+++|-+ ....|+.....+...+..++.|.++|. ||||..++.+.++..+|.+.++-+.
T Consensus 65 ~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDl-fGRr~~~i~g~~l~vvG~Iv~atA~------------- 129 (599)
T PF06609_consen 65 SILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDL-FGRRYFFIIGSLLGVVGSIVCATAQ------------- 129 (599)
T ss_pred HHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHH-hcchHHHHHHHHHHHhHHHHhhcCC-------------
Confidence 3345788888854 566788899999999999999999999 9999999999999999999998765
Q ss_pred ccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccchhH
Q 011743 117 SCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWW 196 (478)
Q Consensus 117 ~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~ 196 (478)
+...++.+..+.|+|.|.... ....++|..|.+. |..+..+.....-+....+|.++..+..+.+||
T Consensus 130 ------~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~------R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WR 196 (599)
T PF06609_consen 130 ------NMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKW------RGLGLAIASIPFIITTWISPLIAQLFAAHSGWR 196 (599)
T ss_pred ------cHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccch------hhhHhHHHHHHHHhhhcccHHHHHHhccCCCcc
Confidence 788899999999999777654 4556899999776 666666555544444456666666665566899
Q ss_pred HHHHHHHHHHHHHHHHH
Q 011743 197 LGFLISSVATLIGLIAL 213 (478)
Q Consensus 197 ~~f~i~~~~~~~~~~~~ 213 (478)
|.|++..+...++++..
T Consensus 197 w~~~~~~i~~~i~~vl~ 213 (599)
T PF06609_consen 197 WIFYIFIIWSGIALVLI 213 (599)
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 99999988776665543
No 93
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.66 E-value=1.5e-14 Score=151.64 Aligned_cols=177 Identities=8% Similarity=-0.032 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhh----hccch-hHHHHHHHHHHHH
Q 011743 20 VFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISD----TYLSR-FATCLVFGTLEVL 94 (478)
Q Consensus 20 l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD----r~~Gr-~~~~~~~~~~~~i 94 (478)
--+..+..++.+..+.++++.|+++.+|+++.++|.+..+..+...+..|+.|+++| | +|| |+.++++.+..++
T Consensus 11 yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr-~Grrrp~il~g~i~~~i 89 (473)
T PRK10429 11 YGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSR-WGKFKPWILIGTLANSV 89 (473)
T ss_pred hccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCC-CCCcchhHhhhhHHHHH
Confidence 345667777888888899999999999999999999999999999999999999999 5 699 4555667777777
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (478)
+.+++.... . + +......++++...+..++......+..++.+|+.++.+ | |.+.+++.+..
T Consensus 90 ~~~llf~~p---~-----~-----~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~--e---R~~l~~~~~~~ 151 (473)
T PRK10429 90 VLFLLFSAH---L-----F-----EGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKR--E---REQLVPYPRFF 151 (473)
T ss_pred HHHHHHcCC---C-----C-----CccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHH--H---HHHHHHHHHHH
Confidence 766664321 0 0 001234556666677788888889999999999985433 1 77888887777
Q ss_pred HHHHHHHHHHHHHhhhc-------cchhHHHHHHHHHHHHHHHHHHHh
Q 011743 175 TTLAAMIGVTAIVYVFI-------DQGWWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 175 ~~~g~~~~p~i~~~l~~-------~~~~~~~f~i~~~~~~~~~~~~~~ 215 (478)
.++|+.+.+.+...+.+ ..+|+....+.+++.+++.+..+.
T Consensus 152 ~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~ 199 (473)
T PRK10429 152 ASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLR 199 (473)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHc
Confidence 77776666554433211 235666666665555544444443
No 94
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.65 E-value=6.5e-15 Score=158.84 Aligned_cols=196 Identities=13% Similarity=0.154 Sum_probs=150.4
Q ss_pred cchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHH
Q 011743 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (478)
Q Consensus 14 ~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 93 (478)
+|.+.+.+....+....+.++.......++++++++..+.|++.+.+.++..++.++.|+++|| +||||.+.+++++++
T Consensus 31 ~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r-~~r~~~i~~g~ll~~ 109 (633)
T TIGR00805 31 IKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTK-LHRPIVIGIGCAIMG 109 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcc-cCcceEEEecHHHHH
Confidence 4444444444555555556666667778889999999999999999999999999999999999 899999999999999
Q ss_pred HHHHHHHHHhhcccCC----------------CCCCC-C-C----------cccc----chhHHHHHHHHHHHHhccccc
Q 011743 94 LSLVMLTIQAYSKSLH----------------PPDCG-K-S----------SCLK----GAIAAYFYGSLYLYSLGCGGN 141 (478)
Q Consensus 94 i~~~~~~~~~~~~~~~----------------~~~~~-~-~----------~~~~----~~~~~~~~~~~~l~gig~g~~ 141 (478)
+|.+++++.+...--+ +..+. . + .+.+ ...+..++++|+++|+|.+..
T Consensus 110 lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~ 189 (633)
T TIGR00805 110 LGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPI 189 (633)
T ss_pred HHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcc
Confidence 9999988764211000 00010 0 0 0000 013567789999999999999
Q ss_pred cccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccc----------------------hhHHHH
Q 011743 142 RGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ----------------------GWWLGF 199 (478)
Q Consensus 142 ~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~----------------------~~~~~f 199 (478)
.+...+++.|.+|+++ |+...++++.+..+|..+|+.+++++.+.+ +||..|
T Consensus 190 ~~~~~~~i~d~~~~~~------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~F 263 (633)
T TIGR00805 190 FPLGISYIDDFAKSKN------SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGF 263 (633)
T ss_pred hhcCchhhhccCCccc------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHH
Confidence 9999999999999988 999999999999999999999999886532 388889
Q ss_pred HHHHHHHHHHHHHHHhc
Q 011743 200 LISSVATLIGLIALAIG 216 (478)
Q Consensus 200 ~i~~~~~~~~~~~~~~~ 216 (478)
++.+++.++..+.+++.
T Consensus 264 li~g~l~~l~~v~l~~~ 280 (633)
T TIGR00805 264 LICGGVALLTSIPFFFF 280 (633)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 98887776655544444
No 95
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.65 E-value=4.7e-15 Score=153.31 Aligned_cols=343 Identities=10% Similarity=0.044 Sum_probs=214.6
Q ss_pred HHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhh----hccchhHHHH-HHHHHHHHHHHH
Q 011743 24 SALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISD----TYLSRFATCL-VFGTLEVLSLVM 98 (478)
Q Consensus 24 ~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD----r~~Gr~~~~~-~~~~~~~i~~~~ 98 (478)
.+..++.+.....++..|+++.+|+++..+|.+..+..+...+..|+.|.++| | +||||-.+ +|.+..+++.++
T Consensus 10 ~~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr-~Grrrp~~l~g~i~~~~~~~l 88 (428)
T PF13347_consen 10 DLGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTR-WGRRRPWILIGAILLALSFFL 88 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeeccc-ccccceEeehhhHHHHHHHHH
Confidence 35555555556678899999999999999999999999999999999999999 7 89777655 567778887777
Q ss_pred HHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHH
Q 011743 99 LTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLA 178 (478)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 178 (478)
+.... |. ++ +......++.+..++..++......+..++..|..+++++ |.+..++......+|
T Consensus 89 lf~~~--p~----~~-----~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~-----R~~l~~~~~~~~~~g 152 (428)
T PF13347_consen 89 LFSPP--PA----GL-----SFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDE-----RTRLSSWRMIFSMIG 152 (428)
T ss_pred hhccc--cc----hh-----hhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhh-----hhhHHHHHHHHHHHH
Confidence 76441 00 00 0012345567777778999999999999999999986542 778888887777777
Q ss_pred HHHHHHHHHhhhc----c---chhHHHHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhcCCCCCCC
Q 011743 179 AMIGVTAIVYVFI----D---QGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDN 251 (478)
Q Consensus 179 ~~~~p~i~~~l~~----~---~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (478)
..+...+.+.+.+ . .+|++...+.+++.++..++.....|+.+++.+++++
T Consensus 153 ~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~---------------------- 210 (428)
T PF13347_consen 153 SLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEK---------------------- 210 (428)
T ss_pred HHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeecccccccccc----------------------
Confidence 7655555554432 1 1688888877777766666655554430000000000
Q ss_pred chhhhhhhhhhccCcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhHhhcch
Q 011743 252 PEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQT 331 (478)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 331 (478)
.. ++.+..+ +..+++ .+...+.........+........
T Consensus 211 -----------------~~------~~~~~~~-----------------~~~~nr-~~~~l~~~~~~~~~~~~~~~~~~~ 249 (428)
T PF13347_consen 211 -----------------KI------SLRDSLR-----------------SLFRNR-PFRILLLAFFLQWLAFALMNTFLP 249 (428)
T ss_pred -----------------cc------ccccchh-----------------hhcccc-hHHHHHHHHHHHHhhhhhhhhHHH
Confidence 00 0000000 000111 111112222222121222111122
Q ss_pred hhhhhhcccCCCCCCcccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 011743 332 LSVTQGAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVE 411 (478)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~ 411 (478)
.+.....+.+ . ..+.+.....+..++..|+..++.+++ +.++.+..|.++.+++.++..+..
T Consensus 250 y~~~~vl~~~-~------~~~~~~~~~~~~~~v~~~~~~~l~~r~-----------gk~~~~~~~~~~~~~~~~~~~~~~ 311 (428)
T PF13347_consen 250 YYFTYVLGNE-G------LISIFMLIFFVASIVGSPLWGRLSKRF-----------GKKKVYIIGLLLAALGFLLLFFLG 311 (428)
T ss_pred HHHHHHhcCc-h------hhHHHHHHHHHHHHHHHHHHHHHHHHc-----------cceeehhhhHHHHHHHHHHHHHHH
Confidence 2222212211 1 123333445566666777666644433 334557888888888888777763
Q ss_pred HHHHhhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCc-------chhHHHHHHHHHHhhccC
Q 011743 412 VKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPA-------GMRTLLLHLHFCHCHLAT 477 (478)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~-------~~~g~~~g~~~~~~~lg~ 477 (478)
. .+.+++.+..++.+++.+...+..++..++..+. +..|...|++++...+|.
T Consensus 312 ~-------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~ 371 (428)
T PF13347_consen 312 P-------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQ 371 (428)
T ss_pred h-------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHH
Confidence 1 3678888899999999999999999999998873 457899999988877654
No 96
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.64 E-value=6.9e-14 Score=148.32 Aligned_cols=141 Identities=16% Similarity=0.041 Sum_probs=127.2
Q ss_pred cccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchh
Q 011743 44 NEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAI 123 (478)
Q Consensus 44 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (478)
+..+.+........+++.++..+++++.|.++|| +|||++++.++++.+++.+..+++. +
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~-~GRk~~~~~~~~~~~i~~~~~a~a~-------------------~ 170 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDR-FGRKPVLLVSLLLFIIFGILTAFAP-------------------N 170 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhh-cccHHHHHHHHHHHHHHHHHHHHhC-------------------c
Confidence 5667788889999999999999999999999999 9999999999999999998888875 8
Q ss_pred HHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 011743 124 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISS 203 (478)
Q Consensus 124 ~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~ 203 (478)
.+.+++.|++.|++.++...+...+++|.+++++ |+.+.++ ......++.++|.+++++.. +||+.+++..
T Consensus 171 ~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~------R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~ 241 (521)
T KOG0255|consen 171 YWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ------RGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIIS 241 (521)
T ss_pred HHHHHHHHHHHHhhccchhHHhHhhheeecCcch------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHH
Confidence 9999999999999999999999999999999998 9999999 77788888889988888876 8999999988
Q ss_pred HHHHHHHHHH
Q 011743 204 VATLIGLIAL 213 (478)
Q Consensus 204 ~~~~~~~~~~ 213 (478)
...++.++..
T Consensus 242 ~~~~~~~~~~ 251 (521)
T KOG0255|consen 242 IPSGLFLLLW 251 (521)
T ss_pred HHHHHHHHHH
Confidence 7776665553
No 97
>PRK09669 putative symporter YagG; Provisional
Probab=99.63 E-value=4.1e-14 Score=147.06 Aligned_cols=181 Identities=9% Similarity=0.025 Sum_probs=127.6
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhc---cchh-HHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY---LSRF-ATCLVFGTLE 92 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Gr~-~~~~~~~~~~ 92 (478)
.+.--+..+..++.+..+..+++.|+++++|+++.++|.+..+..+...+..|+.|+++||. +||| +.++.+.+..
T Consensus 11 ~~~yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~ 90 (444)
T PRK09669 11 KIGYGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPF 90 (444)
T ss_pred HHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHH
Confidence 33334556677777777788999999999999999999999999999999999999999993 5674 4555676777
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHH
Q 011743 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (478)
Q Consensus 93 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~ 172 (478)
+++.+++.... . ++ ......++++...+.+++......+..++.+|+.++++ | |.+..++..
T Consensus 91 ~i~~~l~f~~p---~-----~~-----~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~--e---R~~l~~~r~ 152 (444)
T PRK09669 91 GVVCLLTFYTP---D-----FG-----ATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPR--E---RHSLQSWRF 152 (444)
T ss_pred HHHHHHHHhCC---C-----CC-----cchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHH--H---HHHHHHHHH
Confidence 77765554321 1 10 01245666666667777777788888899999886533 1 677888888
Q ss_pred HHHHHHHHHHHHHHHhhhc-------cchhHHHHHHHHHHHHHHHHHHHh
Q 011743 173 FATTLAAMIGVTAIVYVFI-------DQGWWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 173 ~~~~~g~~~~p~i~~~l~~-------~~~~~~~f~i~~~~~~~~~~~~~~ 215 (478)
...++|..+++.+...+.. ..+|+..+.+.+++..+..++.++
T Consensus 153 ~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~ 202 (444)
T PRK09669 153 ALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFF 202 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhC
Confidence 7888887777665433322 246777777776665555444433
No 98
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.60 E-value=1.6e-14 Score=140.87 Aligned_cols=149 Identities=13% Similarity=0.036 Sum_probs=136.0
Q ss_pred ccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhH
Q 011743 45 EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIA 124 (478)
Q Consensus 45 ~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (478)
.++-.+.+.|++..++.+...+..|+.|.+.|| +|+|-.+++|+++...+.+++++.. +.
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~-iGy~ipm~~Gl~vmf~sTilFafg~-------------------sy 159 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDR-IGYKIPMVAGLFVMFLSTILFAFGN-------------------SY 159 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHH-hccccHHHHHHHHHHHHHHHHHHcc-------------------hh
Confidence 455677889999999999999999999999999 9999999999999999999999875 77
Q ss_pred HHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q 011743 125 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSV 204 (478)
Q Consensus 125 ~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~ 204 (478)
++++++|.++|+|.+....+..++++|.||+++. |++++|..-..+.+|-.+||..+|.+-+..|++.+|++.+.
T Consensus 160 ~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~e-----r~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~ 234 (464)
T KOG3764|consen 160 PMLFVARSLQGVGSAFADTSGLAMLADVFPEDNE-----RGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAI 234 (464)
T ss_pred HHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchh-----hhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHH
Confidence 8999999999999999999999999999998762 89999999999999999999999999998999999999999
Q ss_pred HHHHHHHHHHhcCc
Q 011743 205 ATLIGLIALAIGKP 218 (478)
Q Consensus 205 ~~~~~~~~~~~~~~ 218 (478)
+.++...+-++..+
T Consensus 235 v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 235 VLLLDGALQLLVIE 248 (464)
T ss_pred HHHHHHHHHHheeC
Confidence 88877776666544
No 99
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.59 E-value=1e-12 Score=134.10 Aligned_cols=177 Identities=15% Similarity=0.059 Sum_probs=118.2
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHH--HHHHHHHHHHHhhHH-HHHhhhccchhHHHHHHHHHH-
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNT--LTNFFGSTFLLCLVG-GFISDTYLSRFATCLVFGTLE- 92 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~--~~~~~~~~~~~~~~~-G~laDr~~Gr~~~~~~~~~~~- 92 (478)
...++...+.....+..+.+.+|.|++ +.|+|..+.|.. .....+...+..|+. ++.+|| +||||..++.+.+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~-~g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWR-LGRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-CCcchhHHHHHHHHH
Confidence 344555566666666666788888886 569999999997 466677777777777 668999 89999976665332
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHH
Q 011743 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (478)
Q Consensus 93 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~ 172 (478)
.+....+.... +. .....++.....+.++..+...+...++..|..++++ ++...+...
T Consensus 81 ~~~~~~~~~~~--~~-------------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~------~~~~~~~~~ 139 (390)
T TIGR02718 81 SACLASLALVG--PD-------------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRT------LAKGNAVQI 139 (390)
T ss_pred HHHHHHHHcCC--cc-------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hhHHHHHHH
Confidence 21222222110 00 0122333444455556666666666667667665544 666777777
Q ss_pred HHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhc
Q 011743 173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 173 ~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
.+..+|..+|+.+.+++.+..|||..|++.++..++..+..+..
T Consensus 140 ~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~ 183 (390)
T TIGR02718 140 AGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWL 183 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 77789999999888899888999999999888776655554443
No 100
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.59 E-value=8.5e-13 Score=129.76 Aligned_cols=137 Identities=16% Similarity=0.120 Sum_probs=120.6
Q ss_pred HHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 011743 32 IANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPP 111 (478)
Q Consensus 32 ~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 111 (478)
....-.+.+.+++.++++..+++.+..++..+..+..+..|++.+| +|+|+.++.|+.++++|..++.=++.
T Consensus 29 ~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk-~gyk~gi~lgL~l~avg~~lF~pAa~------- 100 (422)
T COG0738 29 TCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKK-LGYKAGIVLGLLLYAVGAALFWPAAS------- 100 (422)
T ss_pred hhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHH-hhhHHHHHHHHHHHHHHHHHHhhhhh-------
Confidence 4456677788899999999999999999999999999999999999 89999999999999999988753332
Q ss_pred CCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 011743 112 DCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI 191 (478)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 191 (478)
..+...++++.++.+.|.+..+.+.+++++...++++ -.+-+++......+|+.++|.+++++..
T Consensus 101 ---------~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~------a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 101 ---------SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPES------AAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred ---------hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh------HHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 3478999999999999999999999999999999876 4556677778889999999999987765
No 101
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.57 E-value=2.3e-13 Score=132.17 Aligned_cols=118 Identities=17% Similarity=0.039 Sum_probs=104.3
Q ss_pred CCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHH
Q 011743 47 HFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAY 126 (478)
Q Consensus 47 g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (478)
+-+..-+|.+-+.|.+..++.++..|.++|| +|||.++.+|.+..++...+++.+. ++..
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~-yGRkpvll~c~~~va~s~ll~~~S~-------------------~F~a 123 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDR-YGRKPVLLACLIGVALSYLLWALSR-------------------NFAA 123 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhh-hCchHHHHHHHHHHHHHHHHHHHHH-------------------HHHH
Confidence 3345567999999999999999999999999 7999999999999999888888765 7777
Q ss_pred HHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 011743 127 FYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI 191 (478)
Q Consensus 127 ~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 191 (478)
++++|++.|+.-|-. ....++++|.+++++ |+.+++....+..+|.++||+++|++.+
T Consensus 124 fv~aR~l~Gi~kgnl-~v~rAiisdV~sek~------r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 124 FVLARFLGGIFKGNL-SVIRAIISDVVSEKY------RPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHhhhhccCch-HHHHHHHHhhcChhh------ccceeeeeehhhhcchhhcchhhhHHHh
Confidence 888899999886653 456789999999988 9999999999999999999999999987
No 102
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.57 E-value=2.4e-13 Score=141.98 Aligned_cols=179 Identities=13% Similarity=0.043 Sum_probs=130.6
Q ss_pred CcchhHHHHH-HHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccc-----hhHHHH
Q 011743 13 GFRACTFVFV-LSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLS-----RFATCL 86 (478)
Q Consensus 13 ~~~~~~~l~~-~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-----r~~~~~ 86 (478)
+|+-.+.++. ..+..... +.+...++.++++++|+++.+.+...+...+...+-++ .|.++|| ++ ||+.++
T Consensus 23 ~~~~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~-~~i~G~rRr~~l~ 99 (468)
T TIGR00788 23 HPRVVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDT-FPLFGYTKRWYLV 99 (468)
T ss_pred CcchHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHh-cCCCCccchHHHH
Confidence 3454444444 55555555 66777888889999999999999998888888877665 9999999 77 677777
Q ss_pred HHHHHHH-HHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhh
Q 011743 87 VFGTLEV-LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALA 165 (478)
Q Consensus 87 ~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~ 165 (478)
++.++.. ++. ..++.. ........+.+++.+++.+....+..++..|..+ ++++ .++
T Consensus 100 ~~~~l~~~~~~--~~l~~~----------------~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~---~~~ 157 (468)
T TIGR00788 100 LSGLLGSAILY--GLLPGK----------------VSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPS---AGP 157 (468)
T ss_pred HHHHHHHHHHH--Hhcccc----------------cchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCC---cCC
Confidence 7766653 322 222210 1133344457888999999999999999999998 4321 245
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhc
Q 011743 166 SYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 166 ~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
...++.+...++|..+|+.++|.+.+..+|+..|++.+...++..+...+.
T Consensus 158 ~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~ 208 (468)
T TIGR00788 158 SLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLS 208 (468)
T ss_pred CeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhc
Confidence 567778888899999999999999988899999999887776664444443
No 103
>PTZ00207 hypothetical protein; Provisional
Probab=99.53 E-value=2.8e-11 Score=128.00 Aligned_cols=154 Identities=14% Similarity=0.008 Sum_probs=120.3
Q ss_pred HHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCC
Q 011743 37 SMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKS 116 (478)
Q Consensus 37 ~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 116 (478)
.....+++++|++..+.+++.++.. ....+.++.|+++|| +|||+++.++.+++.++.++++++... . .
T Consensus 48 v~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr-~G~R~vllig~ll~~iG~ll~ala~~~-~-i------- 116 (591)
T PTZ00207 48 LISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDY-LGPRPIFVLSMTVFCLGTLLFALTFQE-V-I------- 116 (591)
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHHhcc-c-c-------
Confidence 4445678999999999999887744 344567788999999 899999999999999999998876310 0 0
Q ss_pred ccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHH-HHHHHHhhhccchh
Q 011743 117 SCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMI-GVTAIVYVFIDQGW 195 (478)
Q Consensus 117 ~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~p~i~~~l~~~~~~ 195 (478)
..+.+.+++.|++.|+|.+...+.....+.++|| ++ |+++.++.....++|+.+ +++..+++. .+|
T Consensus 117 ----~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~------RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~ 183 (591)
T PTZ00207 117 ----EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SN------RGAVVAIMKTFTGLGSAILGSIQLAFFS--DNT 183 (591)
T ss_pred ----cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hh------hHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhH
Confidence 1278889999999999999988888888999997 45 899999999999999975 555555554 367
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 011743 196 WLGFLISSVATLIGLIALA 214 (478)
Q Consensus 196 ~~~f~i~~~~~~~~~~~~~ 214 (478)
+..|++.++..++..++++
T Consensus 184 ~~~fl~l~vl~~vv~ll~~ 202 (591)
T PTZ00207 184 SAYFFFLMSFALVVGILAI 202 (591)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 7777777766655444433
No 104
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.53 E-value=3.1e-13 Score=142.29 Aligned_cols=179 Identities=13% Similarity=0.122 Sum_probs=133.3
Q ss_pred cchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHH
Q 011743 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (478)
Q Consensus 14 ~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 93 (478)
++.........++....+|++..++|.|+++++|++..+.+.......++..++.+++|+++|| +|||+.+..+.+...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~~ 327 (490)
T PRK10642 249 WRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDR-FGRRPFVILGSVALF 327 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHH
Confidence 3333333444456678889999999999999999999888888888889999999999999999 899999988876555
Q ss_pred HHHHH-HHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHH
Q 011743 94 LSLVM-LTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (478)
Q Consensus 94 i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~ 172 (478)
++... +.... ..+...+++++++.+++.+...+...+++.+.+|++. |+++++..+
T Consensus 328 ~~~~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~------Rg~~~g~~~ 384 (490)
T PRK10642 328 VLAIPAFILIN-----------------SNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI------RYSALAAAF 384 (490)
T ss_pred HHHHHHHHHHh-----------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc------chHHHHHHH
Confidence 43333 22221 1145667778888888777777777788889999988 999999877
Q ss_pred HHHHHHHHHHHHHHHhhhccc-hhHHHHHHHHHHHHHHHHHHHhc
Q 011743 173 FATTLAAMIGVTAIVYVFIDQ-GWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 173 ~~~~~g~~~~p~i~~~l~~~~-~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
....+++.++|.+.+++.+.. +|+.++++..+..+++++..++.
T Consensus 385 ~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 429 (490)
T PRK10642 385 NISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTM 429 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence 767777888999999887654 46766665555555555554444
No 105
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.52 E-value=1.6e-12 Score=131.06 Aligned_cols=345 Identities=11% Similarity=0.013 Sum_probs=191.2
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHH-
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV- 93 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~- 93 (478)
+..|.+-...+.-.+++-...++++.+++++.|++.+++|.+.++..+...+.+|+.|.++|| +|.||-++....+..
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dk-lg~kK~Ll~~i~~l~~ 85 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDK-LGLKKHLLWFIAILLL 85 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHH-CTTCSHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcch-hhhhHHHHHHHHHHHH
Confidence 345555555555555555567999999999999999999999999999999999999999999 897776655543322
Q ss_pred -HHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHH
Q 011743 94 -LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (478)
Q Consensus 94 -i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~ 172 (478)
.+-++...-. |.++ .+ ++++..+.++..+....+..+.. |.+.++. .++.+-=+|-.+
T Consensus 86 l~~pff~~v~~--pll~------------~n---~~lg~iig~i~l~~~f~~~~~~~-Ea~~er~---sr~~~feYG~~R 144 (412)
T PF01306_consen 86 LFGPFFIYVFG--PLLQ------------SN---FWLGAIIGGIYLGLVFNAGVPLS-EAYAERV---SRRNGFEYGRAR 144 (412)
T ss_dssp TCHHHHHHTHH--HHHH------------TT----HHHHHHTTTTTTTTTTTHHHHH-HHHHHHH---HHHHSS-HHHHH
T ss_pred HHHHHHHHHHH--HHHH------------HH---HHHHHHHHHHHHHHHHcccchHH-HHHHHHH---HHHhcCCcchHH
Confidence 2332222111 1000 02 33344444444444444433322 3332211 112344455667
Q ss_pred HHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhcCCCCCCCc
Q 011743 173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNP 252 (478)
Q Consensus 173 ~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (478)
.-..+|.+++..++|.+.+ .+-+..|++.....++..++.+..+++..++.+..+.
T Consensus 145 ~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~----------------------- 200 (412)
T PF01306_consen 145 MWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADA----------------------- 200 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTT-----------------------
T ss_pred HHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcc-----------------------
Confidence 7889999999999999986 5667888876655544444444433221111000000
Q ss_pred hhhhhhhhhhccCcccccCCCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhHhhcchh
Q 011743 253 EELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTL 332 (478)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 332 (478)
...+++..+..|- .++-..++++.++.+.......|-.+.|..+.
T Consensus 201 ----------------~~~~~~~~~~~~~-------------------~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~ 245 (412)
T PF01306_consen 201 ----------------LGAKKDKVSLKDV-------------------LSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPI 245 (412)
T ss_dssp ----------------SSS------HHHH-------------------HHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------cccCCCCCcHHHH-------------------HHHhcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000000010 00111244555554444444445555544443
Q ss_pred hhhhhcccCCCCCCcccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 011743 333 SVTQGAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEV 412 (478)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~ 412 (478)
|.... .+.. ...+..+...+++..++=.++.. +..++.+| +++++.+.++..++++=.+..++.
T Consensus 246 y~~~~--f~~~----~~g~~~~G~l~s~~v~~E~~~m~-~~p~li~r-------ig~k~~Lllag~i~~iRi~~~~~~-- 309 (412)
T PF01306_consen 246 YFASF--FQSA----GQGNQMYGYLWSVQVFLEALMMF-FSPWLINR-------IGAKNLLLLAGVIMAIRIIGSGFA-- 309 (412)
T ss_dssp HHHHT--SSSH----HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH-------H-HHHHHHHHHHHHHHHHHHHHT---
T ss_pred HHHHH--hccc----ccChhHHhHHHHHHHHHHHHHHH-HHHHHHHh-------cChHhHHHHHHHHHHHHHHHHhhh--
Confidence 32211 1110 11223333344444444333322 33445555 377788888877777777766666
Q ss_pred HHHhhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHH
Q 011743 413 KRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLH 469 (478)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~ 469 (478)
.+++++++.-.+.++-..+......-++.+..|+++.++...+.
T Consensus 310 -------------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~ 353 (412)
T PF01306_consen 310 -------------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVG 353 (412)
T ss_dssp --------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHH
T ss_pred -------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHH
Confidence 57888898999999999999999999999999999988766653
No 106
>PRK11462 putative transporter; Provisional
Probab=99.52 E-value=4.8e-12 Score=132.06 Aligned_cols=179 Identities=12% Similarity=0.017 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhh---ccchhHHHH-HHHHHHHH
Q 011743 19 FVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDT---YLSRFATCL-VFGTLEVL 94 (478)
Q Consensus 19 ~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr---~~Gr~~~~~-~~~~~~~i 94 (478)
.--+.++..++.+..+..++..|+++.+|+++..+|.+..+.-+...+.-|+.|+++|| .+||||-.+ ++.+..++
T Consensus 13 ~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i 92 (460)
T PRK11462 13 GYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGI 92 (460)
T ss_pred hhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHH
Confidence 33456677777777777899999999999999999999999999999999999999997 278876655 45567777
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (478)
+.+++.... +++. .....++.+.-.+..++......+..++.+|+.++.+ | |.+..++...+
T Consensus 93 ~~~llf~~p--------~~s~-----~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~--e---Rt~l~s~r~~~ 154 (460)
T PRK11462 93 VCVLAYSTP--------DLSM-----NGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPT--Q---RISLQSWRFVL 154 (460)
T ss_pred HHHHHHhCC--------CCCc-----chHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHH--H---HHHHHHHHHHH
Confidence 766655321 1110 1234556666677788888888899999999988643 2 78899998888
Q ss_pred HHHHHHHHHHHHHhhhcc-------chhHHHHHHHHHHHHHHHHHHHh
Q 011743 175 TTLAAMIGVTAIVYVFID-------QGWWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 175 ~~~g~~~~p~i~~~l~~~-------~~~~~~f~i~~~~~~~~~~~~~~ 215 (478)
.++|..+++.+...+.+. .+|+....+.+++.+++.++.+.
T Consensus 155 ~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~ 202 (460)
T PRK11462 155 ATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFF 202 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 888887777665443322 25676666555555555444443
No 107
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.52 E-value=9.4e-18 Score=174.37 Aligned_cols=140 Identities=14% Similarity=0.184 Sum_probs=116.7
Q ss_pred hhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHH
Q 011743 51 AGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGS 130 (478)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (478)
.+.++..+...++..++.+++|+++|| +|||+++.++.++..++.++...+.. ..+.+.+.++
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~-~GRk~~~~~~~~~~~i~~~~~~~~~~----------------~~~~~~~~~~ 108 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADR-YGRKPALIISALLMIIGSILIAFAPS----------------YNNFWMLLIG 108 (451)
T ss_pred HHHHHHHHHHHhhhccccccccccccc-cccccccccccccccccccccccccc----------------cccccccccc
Confidence 356889999999999999999999999 89999999999999999998887641 1267889999
Q ss_pred HHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhcc---chhHHHHHHHHHHHH
Q 011743 131 LYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID---QGWWLGFLISSVATL 207 (478)
Q Consensus 131 ~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~---~~~~~~f~i~~~~~~ 207 (478)
|++.|++.|+..+..+.++.|..|+++ |++..++......+|..++..++-.+... .+||..+.+..+..+
T Consensus 109 R~~~G~~~g~~~~~~~~~~~E~~~~~~------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l 182 (451)
T PF00083_consen 109 RFLIGFGIGGAYVVSPIYISEIAPPKH------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSL 182 (451)
T ss_pred ccccccccccccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999988 88999988888888888887665444332 359999888777665
Q ss_pred HHHHHH
Q 011743 208 IGLIAL 213 (478)
Q Consensus 208 ~~~~~~ 213 (478)
+..+..
T Consensus 183 ~~~~~~ 188 (451)
T PF00083_consen 183 LVLLLR 188 (451)
T ss_pred cccccc
Confidence 444433
No 108
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.51 E-value=2.5e-11 Score=123.90 Aligned_cols=136 Identities=12% Similarity=0.079 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 011743 20 VFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVML 99 (478)
Q Consensus 20 l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~ 99 (478)
+....++.-+.+-...++++.|+++ .|+|..|+|.+.++..+...+.+++.|+++||+..+||.+.+..++.++...+.
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence 4444445555555566899999885 679999999999999999999999999999995456777777666666654444
Q ss_pred HHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHH
Q 011743 100 TIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAA 179 (478)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 179 (478)
.... +.+.+++..++..+......|...++..+...++ ++-++-.+.-.++|.
T Consensus 86 ~~~~-------------------~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~~--------~~~YG~iRlwGSiGf 138 (400)
T PF03825_consen 86 AFSS-------------------SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGDR--------GKDYGRIRLWGSIGF 138 (400)
T ss_pred HHhc-------------------cHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccc--------cCCCCcchhhhhHHH
Confidence 4332 5666666677777777777777777776666532 234444444455555
Q ss_pred HHHH
Q 011743 180 MIGV 183 (478)
Q Consensus 180 ~~~p 183 (478)
.++.
T Consensus 139 ~~~~ 142 (400)
T PF03825_consen 139 IVAA 142 (400)
T ss_pred HHHH
Confidence 5553
No 109
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.50 E-value=2.6e-13 Score=141.92 Aligned_cols=178 Identities=15% Similarity=0.084 Sum_probs=135.0
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
+.+|.+.+..++....++++..++|.|+++++|++..+++.......++..++.+++|+++|| +|||+.+.....+..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr-~g~r~~~~~~~~~~~~ 336 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDL-ANGRRALVACIALALI 336 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCchHHHHHHHHHH
Confidence 347777777788888888888999999999999999999999999999999999999999999 8999987766554444
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (478)
+..+..... ..+....++.+++.|+..............|.+|++. |+++.++....
T Consensus 337 ~~~~~~~~~-----------------~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~------~g~a~gi~~~~ 393 (467)
T PRK09556 337 IFTLGVYQH-----------------ATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA------IGVANGIKGTF 393 (467)
T ss_pred HHHHHHHHh-----------------cCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh------HHHHHHHHHHH
Confidence 332222221 1144445566666665433322223355669999887 99999999988
Q ss_pred HHH-HHHHHHHHHHhhhc------------cchhHHHHHHHHHHHHHHHHHHHhc
Q 011743 175 TTL-AAMIGVTAIVYVFI------------DQGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 175 ~~~-g~~~~p~i~~~l~~------------~~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
.++ |+.++|.+.|++.+ ..+|+..|++..++.+++.+..+..
T Consensus 394 g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 394 AYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred HHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 886 77999999999988 5689999998877777776655443
No 110
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.50 E-value=9e-13 Score=134.72 Aligned_cols=178 Identities=17% Similarity=0.078 Sum_probs=134.2
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHH
Q 011743 12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL 91 (478)
Q Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 91 (478)
+++|..+..+...+.....++....++|.|+++++|+++.+++.+.+...+...++.++.|+++|| +||||.+..+.+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr-~g~~~~~~~~~~~ 291 (393)
T PRK15011 213 RNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKR-LGKRFLMRVAAVA 291 (393)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHH
Confidence 344544444444444445555566789999999999999999999888888888899999999999 8999988877665
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHH
Q 011743 92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (478)
Q Consensus 92 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~ 171 (478)
..+....+.... +.+.+++.+++.+++.|...+...+...|.+|+ + |+++.+++
T Consensus 292 ~~~~~~~~~~~~-------------------~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~------~g~~~~~~ 345 (393)
T PRK15011 292 GVCFYAGMLMAH-------------------SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-Q------AGSATTLY 345 (393)
T ss_pred HHHHHHHHHHHh-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-C------cchHHHHH
Confidence 555443333222 455566677777777776666666777888773 4 68899998
Q ss_pred HHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhc
Q 011743 172 LFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 172 ~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
....++|..++|.++|.+.+..||+..|++..+..+++++..+..
T Consensus 346 ~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 346 TNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 888899999999999999988899999998887777776665543
No 111
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.49 E-value=3.7e-12 Score=133.39 Aligned_cols=175 Identities=15% Similarity=0.067 Sum_probs=145.0
Q ss_pred hHHHHHHHHHHHHHHHHhHH---HHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGI---SMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~---~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 93 (478)
-|++++..++.++..+++.. .+-..+++++|-+..+++++.++......+..|+.+.+.|| +|.|++++.|.++..
T Consensus 44 gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~r-fg~R~v~i~G~~v~~ 122 (509)
T KOG2504|consen 44 GWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNR-FGCRTVMIAGGLVAA 122 (509)
T ss_pred eeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhh-cCchHHHHHHHHHHH
Confidence 46666777777777776653 33456678899999999999999999999999999999999 899999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHH-HHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHH
Q 011743 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGS-LYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (478)
Q Consensus 94 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~ 172 (478)
+|.++..++. +.+.+++. =++.|+|.|+........+..+|++ + |+.+.++..
T Consensus 123 ~g~~lssF~~-------------------~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~k-k------R~lA~Gia~ 176 (509)
T KOG2504|consen 123 LGLLLSSFAT-------------------SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEK-K------RALATGIAV 176 (509)
T ss_pred HHHHHHHHHh-------------------hHHHHHHHHHHHhhccchhhhcchhhhhhhHhHH-H------HHHHHhhhh
Confidence 9999999886 55555544 4568899999999999999988763 2 889999988
Q ss_pred HHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCc
Q 011743 173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKP 218 (478)
Q Consensus 173 ~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~ 218 (478)
.+..+|..+-|.+..++.+.+|||..+++.+...+-..+.....++
T Consensus 177 ~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 177 SGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred ccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8889999988999999999999999999988877666655555554
No 112
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.47 E-value=8.4e-12 Score=129.60 Aligned_cols=150 Identities=17% Similarity=0.133 Sum_probs=127.0
Q ss_pred ccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccch
Q 011743 43 KNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGA 122 (478)
Q Consensus 43 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (478)
.+++|+...+.+.+.++|.++..++.+++|.+.|| +.-.+.+....+.+.+-.++.....
T Consensus 73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r-~~ls~~l~~~~~~w~~~~~~~~~~~------------------- 132 (495)
T KOG2533|consen 73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDR-FPLSKGLSVSGILWGLFGFLTAAVH------------------- 132 (495)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHh-------------------
Confidence 46788999999999999999999999999999999 8977777766666665554444433
Q ss_pred hHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhh------ccchhH
Q 011743 123 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF------IDQGWW 196 (478)
Q Consensus 123 ~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~------~~~~~~ 196 (478)
+.+.+++.|+++|+..+...|+...+++.+|.+++ |+..+++++...++|.++|..++..+. ...|||
T Consensus 133 s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~ 206 (495)
T KOG2533|consen 133 SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWR 206 (495)
T ss_pred hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCce
Confidence 78889999999999999999999999999999988 999999999999999999999888753 346899
Q ss_pred HHHHHHHHHHHHHHHHHHhcCc
Q 011743 197 LGFLISSVATLIGLIALAIGKP 218 (478)
Q Consensus 197 ~~f~i~~~~~~~~~~~~~~~~~ 218 (478)
|.|++.+++.++..++.++..+
T Consensus 207 ~~FiI~G~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 207 WLFIIEGVITLVLGIVVFFFLP 228 (495)
T ss_pred eehhHHHHHHHHHHheEEEEec
Confidence 9999999888766665555433
No 113
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.47 E-value=3.8e-11 Score=116.61 Aligned_cols=297 Identities=12% Similarity=0.075 Sum_probs=205.9
Q ss_pred HHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCC
Q 011743 36 ISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGK 115 (478)
Q Consensus 36 ~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 115 (478)
..+..-+.+++|++.+++|.+.++-.++..++.|++.+++.| +|.++.+..++++.++|..+=...
T Consensus 32 gPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~-~g~er~l~~~Llli~~G~~iR~~~------------- 97 (395)
T COG2807 32 GPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARR-FGEERSLFLALLLIAAGILIRSLG------------- 97 (395)
T ss_pred hhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HhhHHHHHHHHHHHHHHHHHHhcc-------------
Confidence 344456788999999999999999999999999999999999 999999999999999988765432
Q ss_pred CccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccc-h
Q 011743 116 SSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ-G 194 (478)
Q Consensus 116 ~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~-~ 194 (478)
+...++.+-.+.|.|.+..+...++.+-+.||++. +..++.|....++|+.+++.+...+.++. |
T Consensus 98 -------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~-------~~mtglYs~sl~~~aaLaa~lavpla~~~~g 163 (395)
T COG2807 98 -------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRV-------GLMTGLYSTSLGAGAALAAALAVPLAQHSGG 163 (395)
T ss_pred -------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccch-------hhHHhHHHHHHHHHHHHHhhhhhHHHHhhcc
Confidence 46678889999999999999999999999999654 78999999999999999999998888876 7
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhcCCCCCCCchhhhhhhhhhccCcccccCCCC
Q 011743 195 WWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTN 274 (478)
Q Consensus 195 ~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (478)
|+....+-+...++++++++.-..+.+....+++. + ..
T Consensus 164 W~~aL~~WAl~allAl~~WlPq~~r~~~~~~~~~~------------------~------------------------~~ 201 (395)
T COG2807 164 WRGALGFWALLALLALLIWLPQALREQAASIATKL------------------V------------------------SV 201 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccccccccc------------------c------------------------cc
Confidence 99999988888888887776532111100000000 0 00
Q ss_pred ccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhHhhcchhhhhhhcccCCCCCCcccCCCCc
Q 011743 275 QFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGAYMDPRLGSIKVPTPSI 354 (478)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (478)
.+-|| +...+...+.+.+-...||....+++..+.+++.... ..+.+
T Consensus 202 -----------------~~vw~--------~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~--------~aG~l 248 (395)
T COG2807 202 -----------------RKVWR--------SPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAA--------EAGSL 248 (395)
T ss_pred -----------------ccccc--------CchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHH--------HhhhH
Confidence 01111 1122223344555667788888888888876644322 23433
Q ss_pred cCchhHHHHHHHHhhhhHHHH-HhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHH
Q 011743 355 PVLPLLFMAILIPIYEFLFVP-FARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSF 433 (478)
Q Consensus 355 ~~~~~l~~i~~~~~~~~~~~~-l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 433 (478)
..+..+..+... +..| +.+|.. +.+........++.++...+.+... ..+++.
T Consensus 249 lsl~~l~~~~~~-----ll~P~la~R~~------n~r~~~~~~~~~~l~G~~G~~~~P~-------------~~~~lw-- 302 (395)
T COG2807 249 LSLMQLAQLPTA-----LLIPLLARRSK------NQRPLVVLALLLMLVGLVGLLLAPG-------------QLPILW-- 302 (395)
T ss_pred HHHHHHHHHHHH-----HHHHHHHHHhc------ccchHHHHHHHHHHHHHHHHHHhhh-------------hHHHHH--
Confidence 333333333322 3333 333322 4555566666666666666655421 122222
Q ss_pred HHHHHHHHHHhhhhhhhhhhhccCCcchh
Q 011743 434 QYCIFGIADMFTFVGLLEFFYKEAPAGMR 462 (478)
Q Consensus 434 ~~~l~g~ge~~~~p~~~~~~~~~aP~~~~ 462 (478)
.+++|+|.+..+|...+++...+.+.++
T Consensus 303 -~~llG~G~G~~F~laL~li~~rs~~a~~ 330 (395)
T COG2807 303 -ALLLGLGQGGAFPLALTLILLRSSDAAI 330 (395)
T ss_pred -HHHHhCccchHHHHHHHHHHhhcCChHH
Confidence 4889999999999999999999865544
No 114
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.45 E-value=1.5e-12 Score=133.16 Aligned_cols=171 Identities=19% Similarity=0.097 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 011743 23 LSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQ 102 (478)
Q Consensus 23 ~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~ 102 (478)
...+..+++..+..+++.|+.+ .|+ .+.+.....+.++..++.++.|++.|| +||||.+..+..+..++.+++...
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~ 299 (399)
T PRK05122 224 GLALASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINR-LGGLRVAIVSLLVEILGLLLLWLA 299 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHh
Confidence 3344456666677788888764 455 345666777888888999999999999 899999998888888877666554
Q ss_pred hhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHH
Q 011743 103 AYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIG 182 (478)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 182 (478)
. +...+++++++.|++.+...|.......|.+|+++ |++++++++...++|..++
T Consensus 300 ~-------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~~~ 354 (399)
T PRK05122 300 P-------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQN------RGAALGAYSVFLDLSLGIT 354 (399)
T ss_pred c-------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHHHH
Confidence 3 45566778889999999888888888888888776 8999999999999999999
Q ss_pred HHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCcceee
Q 011743 183 VTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRI 222 (478)
Q Consensus 183 p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~ 222 (478)
|.+.|.+.+..||+..|++.+++.+++++..+..+++.++
T Consensus 355 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (399)
T PRK05122 355 GPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAPR 394 (399)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 9999999888899999999888877777666655444333
No 115
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.44 E-value=3.2e-12 Score=127.01 Aligned_cols=174 Identities=21% Similarity=0.217 Sum_probs=154.2
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhH-HHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFA-TCLVFGTLEV 93 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~-~~~~~~~~~~ 93 (478)
|..+...+..++..........+++.|..+.+|.+..+.+.......++..++.++.|+++|| +|||+ .+..+..+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 253 (352)
T cd06174 175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDR-LGRRRLLLLIGLLLAA 253 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHH
Confidence 445666777778888888888999999998889999999999999999999999999999999 89999 9999999988
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHH
Q 011743 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (478)
Q Consensus 94 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~ 173 (478)
++.+.+.... +....++..++.+++.+...+...+++.|.+|+++ |++.++....
T Consensus 254 i~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 308 (352)
T cd06174 254 LGLLLLALAP-------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEA------RGTASGLFNT 308 (352)
T ss_pred HHHHHHHHhc-------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH------HHHHHHHHHH
Confidence 8888777653 46677888999999999999999999999999877 9999999999
Q ss_pred HHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 011743 174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (478)
Q Consensus 174 ~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~ 214 (478)
..++|..++|.+.+.+.+..+|+..|.+.++..+++.+...
T Consensus 309 ~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 309 FGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 99999999999999999888999999998888777666543
No 116
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.43 E-value=2.7e-12 Score=129.08 Aligned_cols=170 Identities=14% Similarity=0.092 Sum_probs=135.5
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHH
Q 011743 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (478)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~ 95 (478)
..+.+....++..+.......+.+.|. +++|.+..+++.+...+.+...++.++.|+++|| +|||+.+.++.++..++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~ 283 (377)
T TIGR00890 206 QFWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDK-IGRQKTMSIVFGISAVG 283 (377)
T ss_pred cHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHH
Confidence 344455555555555555556666664 5689999999999999999999999999999999 89999999999888888
Q ss_pred HHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHH
Q 011743 96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT 175 (478)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (478)
.+++..... .+...++...++.+++.+...+..++++.|.+|+++ |++.+++.+...
T Consensus 284 ~~~~~~~~~-----------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~ 340 (377)
T TIGR00890 284 MAAMLFIPM-----------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN------SAANYGFLYTAK 340 (377)
T ss_pred HHHHHHccc-----------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh------hhhHhHHHHHHH
Confidence 776655431 122334455677888888888888889999999888 999999999999
Q ss_pred HHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 011743 176 TLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGL 210 (478)
Q Consensus 176 ~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~ 210 (478)
++|..++|.+.|.+.+..||+..|.+.+++.++++
T Consensus 341 ~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 341 AVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 99999999999999988999999998877665543
No 117
>PRK09952 shikimate transporter; Provisional
Probab=99.42 E-value=4.4e-12 Score=131.62 Aligned_cols=181 Identities=10% Similarity=-0.041 Sum_probs=133.6
Q ss_pred cchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHH
Q 011743 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (478)
Q Consensus 14 ~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 93 (478)
++.........++..+++|....+++.|+++++|++......+.....+...++.++.|+++|| +||||++..+.++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr-~grr~~~~~~~~~~~ 327 (438)
T PRK09952 249 PGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADR-FGRRRVYITGALIGT 327 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHH
Confidence 3433334445667778888888999999999999998876666666777788888999999999 899999998877665
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHH
Q 011743 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (478)
Q Consensus 94 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~ 173 (478)
++...+...... ......+++..++.+++.+...+...++++|.+|.+. |+++.++.+.
T Consensus 328 ~~~~~~~~~~~~---------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~------r~tg~g~~~~ 386 (438)
T PRK09952 328 LSAFPFFMALEA---------------QSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY------RYSGAGVGYQ 386 (438)
T ss_pred HHHHHHHHHHHc---------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch------hHHHHhHHHH
Confidence 544333322100 1133344455666778888888888999999999877 8889998775
Q ss_pred HH-HHHHHHHHHHHHhhhccc--hhHHHHHHHHHHHHHHHHHHHhc
Q 011743 174 AT-TLAAMIGVTAIVYVFIDQ--GWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 174 ~~-~~g~~~~p~i~~~l~~~~--~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
.. .+|+.++|.+.+++.+.. +|+..+.+.++..+++.+..+..
T Consensus 387 ~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 387 VASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 54 589999999999987643 48888887777777676665544
No 118
>PRK03699 putative transporter; Provisional
Probab=99.42 E-value=2.6e-12 Score=131.35 Aligned_cols=173 Identities=13% Similarity=0.109 Sum_probs=136.5
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
+.++.+.+..++...+++++..++|.|+++++|++..+++.+.+.+.++..++.+++|+++|| +|||+.+.....+..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~l~~~~~~~~~ 283 (394)
T PRK03699 205 IGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRF-FDLQRILTVLAGLALV 283 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHH-hchhhHHHHHHHHHHH
Confidence 445666666677777788888999999999999999999999999999999999999999999 8999998877766666
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (478)
...++.... +.....+..++.|++.+...+...+...+..|++ +++..++....
T Consensus 284 ~~~~~~~~~-------------------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~ 337 (394)
T PRK03699 284 LMYLFVNTD-------------------DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-------SPKLVNFILTC 337 (394)
T ss_pred HHHHHHHcC-------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-------CHHHHHHHHHh
Confidence 554443332 3444555667788877777787777777766533 35567788888
Q ss_pred HHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 011743 175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (478)
Q Consensus 175 ~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~ 214 (478)
.++|..++|.+.|++.+..|++..|++.+++.+++.+...
T Consensus 338 ~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 377 (394)
T PRK03699 338 GTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCI 377 (394)
T ss_pred hhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHH
Confidence 8999999999999999989999999887777666654433
No 119
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.41 E-value=5.1e-12 Score=127.60 Aligned_cols=172 Identities=13% Similarity=0.038 Sum_probs=133.0
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~ 96 (478)
.+.+....++..........+++.|+++++|.++.+++.+.....+...++.+++|+++|| +|||+.+.++.++..+..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~ 279 (375)
T TIGR00899 201 TRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKR-FGKRRLMLLAALAGVAFY 279 (375)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hcchhHHHHHHHHHHHHH
Confidence 3333444444444444555678889989999999999998888877888888999999999 899999988877655554
Q ss_pred HHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 011743 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (478)
....... +.+.+++.+.+.+++.+...+...++..|..|+ + +++++++++...+
T Consensus 280 ~~~~~~~-------------------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~ 333 (375)
T TIGR00899 280 TGLAADN-------------------SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-R------AGAATTLYTNTGR 333 (375)
T ss_pred HHHHHHH-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-h------hhHHHHHHHHHHH
Confidence 4433332 455566777888888888888778888888764 3 5689999999999
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHh
Q 011743 177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 177 ~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~ 215 (478)
+|..++|.+.|.+.+..||+..|++.+++.+++.+....
T Consensus 334 ~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 334 VGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 999999999999988889999999888877777666544
No 120
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.40 E-value=4.1e-12 Score=138.17 Aligned_cols=135 Identities=15% Similarity=0.025 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHH
Q 011743 55 NTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLY 134 (478)
Q Consensus 55 ~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 134 (478)
....+..++..++.+++|+++|| +|||+++.++.++.+++.+++.+.. +...+++.+++.
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr-~GRr~~l~~~~~lsai~~ll~~~~~-------------------s~~~ll~~~~l~ 658 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDK-IGRLRMLAGSMVLSCISCFFLSFGN-------------------SESAMIALLCLF 658 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHHc-------------------cHHHHHHHHHHH
Confidence 34556668889999999999999 8999999999999998887777653 344556667777
Q ss_pred HhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 011743 135 SLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (478)
Q Consensus 135 gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~ 214 (478)
+++.++..+...++++|++|++. |++++++.+...++|+++||.+++.+.+ .+...+|++.+++.+++.++..
T Consensus 659 g~~~~~~~~~~~a~~aEl~Pt~~------Rgta~Gi~~~~~rlGaiigp~i~g~L~~-~~~~~pf~i~a~~lll~~ll~~ 731 (742)
T TIGR01299 659 GGLSIAAWNALDVLTVELYPSDK------RATAFGFLNALCKAAAVLGILIFGSFVG-ITKAAPILFASAALACGGLLAL 731 (742)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHH
Confidence 88777788889999999999887 9999999999999999999999998765 3567788888777776666555
Q ss_pred hc
Q 011743 215 IG 216 (478)
Q Consensus 215 ~~ 216 (478)
+.
T Consensus 732 ~L 733 (742)
T TIGR01299 732 KL 733 (742)
T ss_pred hC
Confidence 43
No 121
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.39 E-value=1.2e-10 Score=112.82 Aligned_cols=167 Identities=13% Similarity=0.008 Sum_probs=126.8
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~ 96 (478)
.........++-.........+..-+....|.+..+..++......+..++....|.++|+ +||||...+......+..
T Consensus 79 l~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~-~grr~~f~~T~l~t~v~~ 157 (528)
T KOG0253|consen 79 LFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADT-IGRRKGFNLTFLVTGVFG 157 (528)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhh-hhcchhhhhhHHHHHHHH
Confidence 4445555566666656566666677778889999999999999999999999999999999 999999887776655544
Q ss_pred HHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 011743 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (478)
.+-..+ .++..+++.|.+.++|.|+ .|...++-.|-.|..+ |....-+. ....
T Consensus 158 ~is~~s-------------------pnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~------r~~~~V~~-~~wa 210 (528)
T KOG0253|consen 158 VISGAS-------------------PNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH------RWLLTVMS-FFWA 210 (528)
T ss_pred HhhcCC-------------------CCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC------CCcchhHH-HHHH
Confidence 443332 2778899999999999999 8999999999999877 66665555 5567
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHH
Q 011743 177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLI 211 (478)
Q Consensus 177 ~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~ 211 (478)
+|.++...+.=.+...+||||-.+...+...+.+.
T Consensus 211 ig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~ 245 (528)
T KOG0253|consen 211 IGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAAR 245 (528)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHH
Confidence 77777777665566678999977766654433333
No 122
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.38 E-value=1e-11 Score=130.71 Aligned_cols=150 Identities=19% Similarity=0.151 Sum_probs=117.0
Q ss_pred HhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 011743 33 ANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPD 112 (478)
Q Consensus 33 ~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 112 (478)
.+..++|.|+++++|++..+++.+.+...++..++.+++|+++|| +|||+.+..+.++..++.++.....
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~--------- 362 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDW-LGTRKAYVCSLLISQLLIIPVFAIG--------- 362 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHhhcc---------
Confidence 456789999998999999999999999999999999999999999 8999999888776665554433221
Q ss_pred CCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 011743 113 CGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID 192 (478)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~ 192 (478)
..+.+...+..++.+....+..+..++++.|.+|+++ |++.+++.+...++|..+||.++|.+.+.
T Consensus 363 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~lgp~l~g~l~~~ 428 (496)
T PRK03893 363 --------GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQ------RAAGLGFTYNVGALGGALAPILGALIAQR 428 (496)
T ss_pred --------ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHH------hhcccchhhhhhhHHHHHHHHHHHHHhcc
Confidence 1133333344444433333445667788899999877 89999999999999999999999999998
Q ss_pred chhHHHHHHHHHHH
Q 011743 193 QGWWLGFLISSVAT 206 (478)
Q Consensus 193 ~~~~~~f~i~~~~~ 206 (478)
.||+..+.+.+...
T Consensus 429 ~g~~~~~~~~~~~~ 442 (496)
T PRK03893 429 LDLGTALASLSFSL 442 (496)
T ss_pred CChHHHHHHHHHHH
Confidence 99988876555443
No 123
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.38 E-value=3.6e-12 Score=128.95 Aligned_cols=167 Identities=13% Similarity=0.101 Sum_probs=131.8
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
+..+......++....++....+++.|+++++|.+..+.+.+.....+...++.++.|+++|| +|||+.+..+..+..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~ 297 (394)
T TIGR00883 219 KPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDR-IGRRPVLIIFTVLAAL 297 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHH
Confidence 346666777778888888888999999999999999999999999999999999999999999 8999988766554443
Q ss_pred HH-HHHH-HHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHH
Q 011743 95 SL-VMLT-IQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (478)
Q Consensus 95 ~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~ 172 (478)
.. .+.. ... ..+...++....+.+++.+...+...+.+.|.+|+++ |++++++.+
T Consensus 298 ~~~~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~ 354 (394)
T TIGR00883 298 LAVPLLMALLD-----------------SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV------RYTGASLAY 354 (394)
T ss_pred HHHHHHHHHhc-----------------CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc------eeeEeeehh
Confidence 33 2222 211 1245566677788888888889999999999999888 888888855
Q ss_pred -HHHHHHHHHHHHHHHhhhccch-hHHHHHHHHHH
Q 011743 173 -FATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVA 205 (478)
Q Consensus 173 -~~~~~g~~~~p~i~~~l~~~~~-~~~~f~i~~~~ 205 (478)
....+|..++|.++|++.+..| |+..++...+.
T Consensus 355 ~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~ 389 (394)
T TIGR00883 355 NLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAAL 389 (394)
T ss_pred HhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHH
Confidence 4456888899999999988877 87776665544
No 124
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.37 E-value=1.5e-10 Score=117.91 Aligned_cols=184 Identities=16% Similarity=0.069 Sum_probs=137.6
Q ss_pred cchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhc---cchhHH-HHHHH
Q 011743 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY---LSRFAT-CLVFG 89 (478)
Q Consensus 14 ~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Gr~~~-~~~~~ 89 (478)
.|+-..--...+..++.+-.+..++..|+++..|+++..+|.+..+.-+..++.-|+.|.++||. +||+|- ++++.
T Consensus 11 ~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ 90 (467)
T COG2211 11 LKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGA 90 (467)
T ss_pred HHHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHh
Confidence 34444455677788888888899999999999999999999999999999999999999999974 677664 55556
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHH
Q 011743 90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (478)
Q Consensus 90 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~ 169 (478)
+.+++..+++..+.+ . +.+......++.-.+.++++..+.....++.+++.++.+ | |.+..+
T Consensus 91 ip~~i~~~l~F~~p~--~-----------~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~--E---R~~l~s 152 (467)
T COG2211 91 IPFAIVAVLLFITPD--F-----------SMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQ--E---RASLTS 152 (467)
T ss_pred HHHHHHHHHHHcCCC--c-----------ccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHH--H---HHHHHH
Confidence 778888877776541 0 112356677777888999999999999999999987644 2 788999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhc-------cchhHHHHHHHHHHHHHHHHHHHh
Q 011743 170 FYLFATTLAAMIGVTAIVYVFI-------DQGWWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 170 ~~~~~~~~g~~~~p~i~~~l~~-------~~~~~~~f~i~~~~~~~~~~~~~~ 215 (478)
+-..+.++|..+...+.+.+.. ..||+..-.+.+++..+..+..++
T Consensus 153 ~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~ 205 (467)
T COG2211 153 WRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFF 205 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9888888887666555544432 346776666555555555444443
No 125
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.37 E-value=2.4e-12 Score=110.18 Aligned_cols=134 Identities=19% Similarity=0.202 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHh
Q 011743 57 LTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSL 136 (478)
Q Consensus 57 ~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gi 136 (478)
...+.++..++.++.|+++|| +|||+.+..+..+..++.+++.... +.+.+.+.+++.|+
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~g~ 63 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDR-FGRKPVLLVGLFIFVLSTAMFALSS-------------------NITVLIIARFLQGF 63 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhh-cchhHHHHHHHHHHHHHHHHHHHhc-------------------cHHHHHHHHHHHHH
Confidence 445677888899999999999 8999999999988888877766543 56777888999999
Q ss_pred ccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhc
Q 011743 137 GCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 137 g~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
+.+...+...+++.|.+|+++ |++..++.+...++|..++|.+.+.+.+..+|++.|++.+...+++.+.....
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 64 GAAFALVAGAALIADIYPPEE------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred HHHHHHHhHHHHHHHHCChhh------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999887 89999999999999999999999999888899999998877766665554443
No 126
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.37 E-value=1e-11 Score=127.06 Aligned_cols=170 Identities=11% Similarity=0.013 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHHHhHHHHHHHcccccCCchh---hHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 011743 21 FVLSALENMGFIANGISMVLYFKNEMHFDIA---GASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLV 97 (478)
Q Consensus 21 ~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~ 97 (478)
+...++.......+.++++.|+.+..+.... ..+.+..+..++..++.++.|+++|| +|||+.+..+..+..++.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~ 303 (408)
T PRK09874 225 FVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDR-IGPEKILITALIFSVLLLI 303 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccchhHHHHHHHHHHHHH
Confidence 3333444445455667778887765442222 24566667778888899999999999 8999999988887777666
Q ss_pred HHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHH
Q 011743 98 MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTL 177 (478)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 177 (478)
.+.... +.+.+++.+++.|++.+...|...+.+.+..|+++ |++.+++++...++
T Consensus 304 ~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~ 358 (408)
T PRK09874 304 PMSFVQ-------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI------AGRIFSYNQSFRDI 358 (408)
T ss_pred HHHHhc-------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc------ceeeehHHHHHHHH
Confidence 555432 45667778889999999999999888888888777 89999999999999
Q ss_pred HHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhc
Q 011743 178 AAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 178 g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
|..+||.++|.+.+..||+..|++.+++.+++.+..+..
T Consensus 359 g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 359 GNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998999999999888877776655443
No 127
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.36 E-value=9e-12 Score=128.44 Aligned_cols=178 Identities=12% Similarity=0.001 Sum_probs=137.5
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHcccccCCc--------hhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHH
Q 011743 18 TFVFVLSALENMGFIANGISMVLYFKNEMHFD--------IAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG 89 (478)
Q Consensus 18 ~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~--------~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~ 89 (478)
+.+++..++..........+++.|+++ .|.+ ..+.+...++..+...++.++.|+++|| +|||+++.++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr-~g~r~~l~~~~ 288 (418)
T TIGR00889 211 AIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKR-FGIKKVMLLSL 288 (418)
T ss_pred eeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHH
Confidence 345555555555444556777888754 4544 3667999999999999999999999999 89999999999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHH
Q 011743 90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (478)
Q Consensus 90 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~ 169 (478)
++..++..++...... ..+...+++.+++.|++.+...++...++.|.+|+++ |+++++
T Consensus 289 ~~~~v~~~l~~~~~~~---------------~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~------~g~~~g 347 (418)
T TIGR00889 289 VAWALRFGFFAYGDPE---------------YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHI------RASAQG 347 (418)
T ss_pred HHHHHHHHHHHHcCcc---------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHH
Confidence 9888887666553200 1134566778899999999988998999999999877 999999
Q ss_pred HHH-HHHHHHHHHHHHHHHhhhcc------chhHHHHHHHHHHHHHHHHHHHhcCc
Q 011743 170 FYL-FATTLAAMIGVTAIVYVFID------QGWWLGFLISSVATLIGLIALAIGKP 218 (478)
Q Consensus 170 ~~~-~~~~~g~~~~p~i~~~l~~~------~~~~~~f~i~~~~~~~~~~~~~~~~~ 218 (478)
+.+ ....+|..+||.++|++.+. +||+..|.+.+++.+++.++.++..+
T Consensus 348 ~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 348 LFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 997 56789999999999999876 46999999888877666665555444
No 128
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.36 E-value=2.5e-11 Score=124.09 Aligned_cols=176 Identities=10% Similarity=-0.017 Sum_probs=138.0
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
+..|.+.+...+...+++++..+++.|+++ +|++..+++...+.+.++..++.++.|++.|| +|||+.+.++..+..+
T Consensus 205 ~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r-~~~~~~~~~~~~l~~~ 282 (393)
T PRK09705 205 PRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARH-QDRRKLLMLALVLQLV 282 (393)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhh-ccchHHHHHHHHHHHH
Confidence 445666666677788888999999999976 79999999999999999999999999999999 8999999998887777
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCC-CChhhhhhhhhHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDE-NDPKGAKALASYFNFYLF 173 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~-~~~~~~~~r~~~~~~~~~ 173 (478)
+..++.... . +..... ..+.|++.+...|.......+.+++ ++ +++.+++.+.
T Consensus 283 ~~~~~~~~~-----------------~-~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~ 336 (393)
T PRK09705 283 GFCGFIWLP-----------------L-QLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPAI------AGKLVAFMQG 336 (393)
T ss_pred HHHHHHHcc-----------------c-hHHHHH--HHHHHHhccchHHHHHHHHHhhcCCHHH------HHHHHHHHHH
Confidence 766554322 0 112222 2456788888888777777787763 33 7899999999
Q ss_pred HHHHHHHHHHHHHHhhhccch-hHHHHHHHHHHHHHHHHHHHhcCc
Q 011743 174 ATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLIALAIGKP 218 (478)
Q Consensus 174 ~~~~g~~~~p~i~~~l~~~~~-~~~~f~i~~~~~~~~~~~~~~~~~ 218 (478)
..+++..++|.+.|++.+..| |...|.+..++.+++.+......+
T Consensus 337 ~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (393)
T PRK09705 337 IGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAP 382 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999998775 888888887777766655554433
No 129
>PRK12382 putative transporter; Provisional
Probab=99.35 E-value=1.1e-11 Score=126.47 Aligned_cols=163 Identities=20% Similarity=0.236 Sum_probs=131.9
Q ss_pred HHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhh
Q 011743 25 ALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAY 104 (478)
Q Consensus 25 ~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~ 104 (478)
++...++..+..+.+.|+++ .|.+ +.+.....+.++..++.++.|++.|| +||||.+..+..+.+++.+++....
T Consensus 226 ~l~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~- 300 (392)
T PRK12382 226 ALQGVGFAVIGTFVSLYFAS-KGWA--MAGFTLTAFGGAFVLMRVLFGWMPDR-FGGVKVAIVSLLVETVGLLLLWLAP- 300 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHh-cCCc--hhHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeehHHHHHHHHHHHHHHHHcc-
Confidence 34445566666778888764 4554 35566677788888999999999999 8999999999888888877665442
Q ss_pred cccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 011743 105 SKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVT 184 (478)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~ 184 (478)
+....++..++.|++.+...|...+.+.|.+|+++ |++++++++...++|..++|.
T Consensus 301 ------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~ig~~ 356 (392)
T PRK12382 301 ------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV------RGTALGGYAAFQDIAYGVSGP 356 (392)
T ss_pred ------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 45566778888999999888888888899998777 999999999999999999999
Q ss_pred HHHhhhccchhHHHHHHHHHHHHHHHHHHHhc
Q 011743 185 AIVYVFIDQGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 185 i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
+.|++.+..||+..|.+.+++.+++.+..+..
T Consensus 357 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 357 LAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 99999998999999999888777776665543
No 130
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.35 E-value=1.1e-11 Score=129.18 Aligned_cols=177 Identities=12% Similarity=0.105 Sum_probs=124.4
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhcc--chhHHH-HHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYL--SRFATC-LVFGTL 91 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~--Gr~~~~-~~~~~~ 91 (478)
+.+|..++..++.....+++..++|.|++++.|++..+++.....+.++..++.+++|+++|| + |||+.. .....+
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr-~~~~r~~~~~~~~~~l 331 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFRGNRGATGVFFMTL 331 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccCCcchHHHHHHHH
Confidence 446666777777777778888999999999999999999999999999999999999999999 7 455432 222333
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHH
Q 011743 92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (478)
Q Consensus 92 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~ 171 (478)
..++...+.... ..+....++..++.|.+.............|.+|+++ |++++++.
T Consensus 332 ~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~ 388 (452)
T PRK11273 332 VTIATIVYWLNP-----------------AGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAGFT 388 (452)
T ss_pred HHHHHHHHHHhc-----------------ccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhh------hhhHHHHH
Confidence 333333322211 0123333344444444322222223345678999888 99999999
Q ss_pred HHHHHHHHHH-HHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHh
Q 011743 172 LFATTLAAMI-GVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 172 ~~~~~~g~~~-~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~ 215 (478)
+...++|+.+ +|.+.|++.+..||+..|++.++..+++++....
T Consensus 389 ~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 433 (452)
T PRK11273 389 GLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV 433 (452)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 9888888654 7999999999899999999888877766655443
No 131
>PRK03545 putative arabinose transporter; Provisional
Probab=99.34 E-value=4.3e-11 Score=122.11 Aligned_cols=173 Identities=9% Similarity=-0.054 Sum_probs=134.0
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~ 96 (478)
.+......++.....++...+++.|++++.|++..+++.+...+.++..++.++.|+++|| +|||+. ..+..+..++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~-~~~~~~~~~~~ 284 (390)
T PRK03545 207 LVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNR-HPSGFL-LIAIALLLVCL 284 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhc-cchhHH-HHHHHHHHHHH
Confidence 4444455555566666677788889888899999999999999999999999999999999 898764 44555444444
Q ss_pred HHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 011743 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (478)
.+..... .+...+++..++.|++.+...+...+.+.+..| ++ |+++++++....+
T Consensus 285 ~~l~~~~------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~~ 339 (390)
T PRK03545 285 LLLLPAA------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DA------TDVAMALFSGIFN 339 (390)
T ss_pred HHHHHHh------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-Cc------HHHHHHHHHHHHH
Confidence 3332221 155666677888888887777777777777765 35 7889999988899
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhc
Q 011743 177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 177 ~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
+|..+||.++|++.+..|++..|++.+++.+++++..+..
T Consensus 340 ~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 340 IGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred HHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999888877777666554
No 132
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.34 E-value=1.9e-11 Score=125.85 Aligned_cols=159 Identities=11% Similarity=-0.059 Sum_probs=130.9
Q ss_pred HHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 011743 31 FIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHP 110 (478)
Q Consensus 31 ~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 110 (478)
..++..++|.|+++.+|++..+.+++.+...++..++.++.|+++|| .++++.+..+.++.+++.+++....
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~------- 310 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHS-ARPGLLMLLSTLGSFLAVGLFGLMP------- 310 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhc-cCcchHHHHHHHHHHHHHHHHHccc-------
Confidence 35566788999988899999999999999999999999999999999 7888888888887777766655432
Q ss_pred CCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 011743 111 PDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF 190 (478)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~ 190 (478)
+....++..++.|++.+...+...+++.|.+|++. |++++++++...++|..+||.+.|++.
T Consensus 311 ------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~~g~~l~G~l~ 372 (417)
T PRK10489 311 ------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM------LGRINGLWTAQNVTGDAIGAALLGGLG 372 (417)
T ss_pred ------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH------HHHHHHHHHHHHhhhHhHHHHHHHHHH
Confidence 45556677788888888777777888999999777 899999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHh
Q 011743 191 IDQGWWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 191 ~~~~~~~~f~i~~~~~~~~~~~~~~ 215 (478)
+..|++..+++.+....+..++...
T Consensus 373 ~~~g~~~~~~~~~~~~~~~~~~~~~ 397 (417)
T PRK10489 373 AMMTPVASASASGFGLLIIGVLLLL 397 (417)
T ss_pred HHhchhhHHHHHHHHHHHHHHHHHH
Confidence 9889888888776655544444433
No 133
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.33 E-value=3e-11 Score=123.74 Aligned_cols=168 Identities=14% Similarity=-0.047 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 011743 20 VFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVML 99 (478)
Q Consensus 20 l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~ 99 (478)
+....++....++.+..++|.|+++ .|++..+.+.+...+.++..++.++.|+++|| +|||+.+..+.+...++...+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~ 302 (406)
T PRK11551 225 LWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDR-LRPRRVVLLIYAGILASLAAL 302 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHH
Confidence 3344445555667777788888875 79999999999999999999999999999999 899999988766666655544
Q ss_pred HHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHH
Q 011743 100 TIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAA 179 (478)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 179 (478)
.... +...+.+..++.|++.+...+...++..|.+|+++ |+++.++.+...++|.
T Consensus 303 ~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~ 357 (406)
T PRK11551 303 AAAP-------------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV------RGTGVGAAVAVGRLGS 357 (406)
T ss_pred HhcC-------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh------hhhhhhHHHHhhhHHH
Confidence 4332 34445566677788777778888899999999888 9999999999999999
Q ss_pred HHHHHHHHhhhccc-hhHHHHHHHHHHHHHHHHHHH
Q 011743 180 MIGVTAIVYVFIDQ-GWWLGFLISSVATLIGLIALA 214 (478)
Q Consensus 180 ~~~p~i~~~l~~~~-~~~~~f~i~~~~~~~~~~~~~ 214 (478)
.++|.+.|.+.+.. +|...+++...+.+++.+..+
T Consensus 358 ~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 358 MAGPLLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred HHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999987754 455666655555555444443
No 134
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.33 E-value=2.4e-11 Score=125.90 Aligned_cols=177 Identities=18% Similarity=0.098 Sum_probs=121.1
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhcc--chhHHH-HHHHHHH
Q 011743 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYL--SRFATC-LVFGTLE 92 (478)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~--Gr~~~~-~~~~~~~ 92 (478)
.+|.+.+..++....++++..++|.|+.+++|++..+++...+.+.++..++.+++|+++|| + ++|+.. ....+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~r~~~~~~~~~~~ 322 (434)
T PRK11663 244 YIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDK-LFNGNRGPMNLIFAAGI 322 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHH-hccCCccHHHHHHHHHH
Confidence 35556666666667777788899999988999999999999999999999999999999999 6 333332 2222111
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHH
Q 011743 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (478)
Q Consensus 93 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~ 172 (478)
.+..+.+..... .+.....+..+..|++.............|.+|+++ |+++.++.+
T Consensus 323 ~~~~~~~~~~~~-----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~ 379 (434)
T PRK11663 323 LLSVGSLWLMPF-----------------ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEA------AGAATGFVG 379 (434)
T ss_pred HHHHHHHHHccc-----------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhh------HHhHHHHHH
Confidence 222111111110 022222233333333222111222345678888777 999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhc
Q 011743 173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 173 ~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
...++|..++|.+.|++.+..||+..|++.+++.+++.+..+..
T Consensus 380 ~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 423 (434)
T PRK11663 380 LFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPF 423 (434)
T ss_pred HHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998999999998888877766655544
No 135
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.33 E-value=6e-12 Score=129.77 Aligned_cols=169 Identities=12% Similarity=-0.027 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHHHhHHHHHHHcccc---cCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 011743 21 FVLSALENMGFIANGISMVLYFKNE---MHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLV 97 (478)
Q Consensus 21 ~~~~~~~~~~~~~v~~~l~~yl~~~---lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~ 97 (478)
.+...+....+......++.|+.+. .+.+..+.+.+.++..+...++.+++|+++|| +||||.+..+..+..++.+
T Consensus 229 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~l~~~~~~ 307 (420)
T PRK09528 229 VLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINR-IGAKNALLLAGTIMAVRII 307 (420)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcchhhHHHHHHHHHHHH
Confidence 3333333344333444566666544 35667788999999999999999999999999 8999999999888888877
Q ss_pred HHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHH-HHHHHH
Q 011743 98 MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF-YLFATT 176 (478)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~-~~~~~~ 176 (478)
+...+. +.+.+++.+.+.+++.+...+....++.|.+|++. +++.++. +....+
T Consensus 308 l~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a~~~~~~~~~~~~ 362 (420)
T PRK09528 308 GSGFAT-------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------SATIYLVGFQFAKQ 362 (420)
T ss_pred HHHhcc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------eeeeeeehHHHHHH
Confidence 776553 56677788889998888887888888899998776 6776655 456678
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHh
Q 011743 177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 177 ~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~ 215 (478)
+|..++|.+.|++.+..||+..|.+.+++.++..++.+.
T Consensus 363 lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 363 LGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVF 401 (420)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999899999999877776655544443
No 136
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.33 E-value=5.2e-11 Score=121.26 Aligned_cols=169 Identities=9% Similarity=-0.049 Sum_probs=143.6
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
|..+..++..++...+......+.+.|+++ +|.+..+.|.+..+..++..+..++.|++.|| +|+|+++.++.+...+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r-~g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQN-CSARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhh-CCHHHHHHHHHHHHHH
Confidence 446667777777788888888999999965 89999999999999999999999999999999 8999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHH-H
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL-F 173 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~-~ 173 (478)
...++..++ +.+.+++...+.|+..|...+....++.+. |+++ ++++.+++. .
T Consensus 283 ~~~~~~~~~-------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~------~~~~q~~~~~~ 336 (382)
T TIGR00902 283 RWAIIGAIE-------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE------IAKLQALYNAL 336 (382)
T ss_pred HHHHHHhHh-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh------HHHHHHHHHHH
Confidence 988777654 778888899999999999999999999987 7766 788889876 4
Q ss_pred HHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 011743 174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA 212 (478)
Q Consensus 174 ~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~ 212 (478)
...+|..++|.++|++.+..|+ ..|++.++..++++++
T Consensus 337 ~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 337 AMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 5679999999999999998886 5566666666655444
No 137
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.32 E-value=5.1e-11 Score=121.20 Aligned_cols=159 Identities=14% Similarity=0.108 Sum_probs=123.5
Q ss_pred HHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhh
Q 011743 25 ALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAY 104 (478)
Q Consensus 25 ~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~ 104 (478)
+.....+.....++|.|+++ .|.+..+++...+...+...++.++.|+++|| +|||+.+..+.++..++.+... .
T Consensus 210 ~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~l~~~~~~~~~~~~~~~-~-- 284 (381)
T PRK03633 210 IISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADR-FGRLLVLRVQVFVVILGSIAML-S-- 284 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHH-cCcHHHHHHHHHHHHHHHHHHh-h--
Confidence 33334444556778888875 69999999999999999999999999999999 8999999988888777665443 1
Q ss_pred cccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 011743 105 SKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVT 184 (478)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~ 184 (478)
. ......+.+.+++.+...|...+.+.|..|+++ ++...+.+....++|..+||.
T Consensus 285 ------------------~-~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~~igp~ 339 (381)
T PRK03633 285 ------------------Q-AAMAPALFILGAAGFTLYPVAMAWACEKVEHHE------LVAMNQALLLSYTVGSLLGPS 339 (381)
T ss_pred ------------------h-HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 1 122345666777777778888888899888665 666777777788999999999
Q ss_pred HHHhhhccchhHHHHHHHHHHHHHHHHHH
Q 011743 185 AIVYVFIDQGWWLGFLISSVATLIGLIAL 213 (478)
Q Consensus 185 i~~~l~~~~~~~~~f~i~~~~~~~~~~~~ 213 (478)
++|++.++.+|++.|.+.+.+.+++.+..
T Consensus 340 ~~G~l~~~~g~~~~f~~~~~~~l~~~~~~ 368 (381)
T PRK03633 340 FTAMLMQNYSDNLLFIMIASVSFIYLLML 368 (381)
T ss_pred HHHHHHHHhCccHHHHHHHHHHHHHHHHH
Confidence 99999998999999998777766554333
No 138
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.32 E-value=2.4e-11 Score=123.74 Aligned_cols=156 Identities=15% Similarity=0.066 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHH
Q 011743 21 FVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLT 100 (478)
Q Consensus 21 ~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~ 100 (478)
.....+.....+.+..+++.|+.+++|++..+++.+.....++..++.++.|+++|| +|||+.+.++.++..+......
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~ 322 (405)
T TIGR00891 244 VVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDW-LGRRKAYVCSLLAGQLLIIPVF 322 (405)
T ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchhhhHHHHHHHHHHHHHHH
Confidence 333344455555667788999999999999999999999999999999999999999 8999999888776543332222
Q ss_pred HHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHH
Q 011743 101 IQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAM 180 (478)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 180 (478)
... .+.+.+.+..++.++..+...+..++++.|.+|+++ |++++++.+...++|..
T Consensus 323 ~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~g~~ 378 (405)
T TIGR00891 323 AIG------------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ------RAAGLGFTYQLGNLGGA 378 (405)
T ss_pred HhC------------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch------hHHHhhHHHHHHHHHHH
Confidence 111 144455566666777767777888899999999888 99999999999999999
Q ss_pred HHHHHHHhhhccch-hHHHHHH
Q 011743 181 IGVTAIVYVFIDQG-WWLGFLI 201 (478)
Q Consensus 181 ~~p~i~~~l~~~~~-~~~~f~i 201 (478)
++|.+.|++.+..| |+..|..
T Consensus 379 ~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 379 LAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHhccccchhHHh
Confidence 99999999999888 8776654
No 139
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.31 E-value=4.7e-11 Score=120.48 Aligned_cols=177 Identities=17% Similarity=0.070 Sum_probs=130.7
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHH-HHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATC-LVFGTLEV 93 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~-~~~~~~~~ 93 (478)
|..+..++..++....++....+++.|+++++|.+..+++.+.....+...++.+++|+++|| +|||+.. ........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDL-LLRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHH-HhhcccchhHHHHHHH
Confidence 446667777888888888888999999999999999999999999999999999999999999 8998621 11111111
Q ss_pred HHHH---HHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHH
Q 011743 94 LSLV---MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF 170 (478)
Q Consensus 94 i~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~ 170 (478)
++.+ +...... . ..+.........+.+.+.+ ..+...+++.|.+|+++ |++++++
T Consensus 294 ~~~~~~~~~~~~~~--~-------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~g~~~~~ 351 (399)
T TIGR00893 294 IAGLVLSLLMFATN--Y-------------VNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNI------AGLTGGL 351 (399)
T ss_pred HHHHHHHHHHHHhc--c-------------chhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhH------HHHHHHH
Confidence 1111 1111110 0 0122333333333444444 78889999999999888 9999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccch-hHHHHHHHHHHHHHHHHHHH
Q 011743 171 YLFATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLIALA 214 (478)
Q Consensus 171 ~~~~~~~g~~~~p~i~~~l~~~~~-~~~~f~i~~~~~~~~~~~~~ 214 (478)
.....++|..++|.+.|++.+..| |+..|++.++..+++.+..+
T Consensus 352 ~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 352 INSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998888 99999888777766655543
No 140
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.31 E-value=1.9e-11 Score=127.56 Aligned_cols=173 Identities=14% Similarity=0.056 Sum_probs=135.6
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhc-cchhHHHHHHH--HHH
Q 011743 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY-LSRFATCLVFG--TLE 92 (478)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~-~Gr~~~~~~~~--~~~ 92 (478)
..+..+...++..++++....+++.|+++ +|++..+++.+.++..++..++.+++|+++||+ +++|+...++. +..
T Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 320 (455)
T TIGR00892 242 GFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFN 320 (455)
T ss_pred hHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHH
Confidence 35556666777778888888899999864 799999999999999999999999999999973 23344333333 333
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHH
Q 011743 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (478)
Q Consensus 93 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~ 172 (478)
.++.+++.... +.+.+++.+++.|++.+...++..+.+.|.+|+++ +++.++++.
T Consensus 321 ~l~~ll~~~~~-------------------~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~------~g~~~g~~~ 375 (455)
T TIGR00892 321 GLTHLLCALAG-------------------DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR------FSSAVGLVT 375 (455)
T ss_pred HHHHHHHHHhc-------------------hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH------HhhHHhHHH
Confidence 33333333332 56667788999999999999999999999999877 899999999
Q ss_pred HHHHHHHHHHHHHHHhhhccc-hhHHHHHHHHHHHHHHHHHHH
Q 011743 173 FATTLAAMIGVTAIVYVFIDQ-GWWLGFLISSVATLIGLIALA 214 (478)
Q Consensus 173 ~~~~~g~~~~p~i~~~l~~~~-~~~~~f~i~~~~~~~~~~~~~ 214 (478)
...++|..+||.++|++.+.. +|+..|++.+++.+++.+...
T Consensus 376 ~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~~ 418 (455)
T TIGR00892 376 IVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFLA 418 (455)
T ss_pred HHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHHH
Confidence 999999999999999998876 599999998887766655433
No 141
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.30 E-value=1.9e-11 Score=121.04 Aligned_cols=179 Identities=16% Similarity=0.133 Sum_probs=140.5
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhcc-chhHHHHHH-HHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYL-SRFATCLVF-GTLE 92 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~-Gr~~~~~~~-~~~~ 92 (478)
|.+|.+++..++--+.=|++..+.|.|+.++.|+|..++++..+.|-.+...++++.||++||++ |||..+.+. ++..
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 67899999999888888999999999999999999999999999999999999999999999998 777665443 3334
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHH
Q 011743 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (478)
Q Consensus 93 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~ 172 (478)
.++.+....+. ..+..+..+..+.+|+-..+-+-.+.....|..|++- -|++.|+..
T Consensus 332 ~~~~~~~w~~~-----------------~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A------aGtA~Gf~G 388 (448)
T COG2271 332 TASLVLYWLAP-----------------NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA------AGTATGFVG 388 (448)
T ss_pred HHHHHHHHcCC-----------------CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh------ccchhchhh
Confidence 44444444332 1255666666666766655544444556678888766 789999999
Q ss_pred HHHHH-HHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhc
Q 011743 173 FATTL-AAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 173 ~~~~~-g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
.+..+ |+..+....|++.+.+||...|.+..+..+++.+++...
T Consensus 389 lf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~ 433 (448)
T COG2271 389 LFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPV 433 (448)
T ss_pred hHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHH
Confidence 88887 889998889999888999999998777776666655544
No 142
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.28 E-value=9.4e-11 Score=122.98 Aligned_cols=173 Identities=12% Similarity=0.016 Sum_probs=114.8
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhH-----HHH--HHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFA-----TCL--VFG 89 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~-----~~~--~~~ 89 (478)
.|.+.+..++.....+.+..+++.|+.+++|++..+++.+.+++.++..++.+++|+++|| +|||+ ... +..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr-~~~r~~~~~r~~~~~~~~ 332 (476)
T PLN00028 254 TWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDV-AARRFGMRGRLWALWIVQ 332 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HHHhcCcchhHHHHHHHH
Confidence 4555554444555556667788999998999999999999999999999999999999999 88762 222 222
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHH
Q 011743 90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (478)
Q Consensus 90 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~ 169 (478)
++..+..+++... .+.....+..++.+++.+...+...+++.+..| ++ ++...+
T Consensus 333 ~l~~i~~~~~~~~-------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~g 386 (476)
T PLN00028 333 TLGGVFCIWLGRA-------------------NSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RS------LGVISG 386 (476)
T ss_pred HHHHHHHHHhccc-------------------chHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hh------chhhhh
Confidence 2222222222111 133444455556666655555555666666543 34 788898
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcC
Q 011743 170 FYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGK 217 (478)
Q Consensus 170 ~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~ 217 (478)
+...+.++|+.++|.+.+ .....+|+..|++.+++.+++.++.++.+
T Consensus 387 ~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 387 LTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred hhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 887777777777776543 22234699999999888887777766654
No 143
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.28 E-value=1.4e-10 Score=118.95 Aligned_cols=177 Identities=12% Similarity=0.050 Sum_probs=131.4
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHH-HHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCL-VFGTLEV 93 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~-~~~~~~~ 93 (478)
|..+...+..++...++++...++|.|++ ++|++..+.+.+.....++..++.++.|+++|| +|||+.+. .+.....
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~l~~~ 299 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDK-LGWMNTVRWFGGVGCG 299 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHH
Confidence 33566667777888888888999998885 589999999999999999999999999999999 89988764 2333333
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHH
Q 011743 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (478)
Q Consensus 94 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~ 173 (478)
++.+.+...... . ..+....++..++.|++.+...+. .+...|.. +++ |++++++.+.
T Consensus 300 ~~~~~l~~~~~~-~-------------~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~-~~~------~g~~~g~~~~ 357 (402)
T TIGR00897 300 IFTLALYYIPQH-F-------------GHSFAVALIIAIALGIFLAGYVPL-AAVFPTLA-PKH------KGAAMSVLNL 357 (402)
T ss_pred HHHHHHHHHHHc-c-------------CCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhC-cch------hHHHHHHHHH
Confidence 333332221100 0 114455566777788887776553 45556654 345 8999999999
Q ss_pred HHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHh
Q 011743 174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 174 ~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~ 215 (478)
..++|..++|.+++.+.+..||...|++.+++.+++.+...+
T Consensus 358 ~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 358 SAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999889999999888877766655544
No 144
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.27 E-value=2.3e-10 Score=114.39 Aligned_cols=178 Identities=16% Similarity=0.111 Sum_probs=148.1
Q ss_pred cchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHH
Q 011743 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (478)
Q Consensus 14 ~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 93 (478)
.+.++..+...++...+.|..++|+.+|+++..|++....++++..|.++..++.+++|+++|| +.|+++.....+.+
T Consensus 210 ~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a 287 (394)
T COG2814 210 RPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLA 287 (394)
T ss_pred CchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHH
Confidence 3558888899999999999999999999999999999999999999999999999999999999 88889888888888
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHH
Q 011743 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (478)
Q Consensus 94 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~ 173 (478)
+....+..... +.+...+..++.|++..........-.++.. +++ ++.+.+++..
T Consensus 288 ~~~l~l~~~~~------------------~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~-p~~------~~~a~sl~~a 342 (394)
T COG2814 288 LALLALTFTGA------------------SPALALALLFLWGFAFSPALQGLQTRLARLA-PDA------ADLAGSLNVA 342 (394)
T ss_pred HHHHHHHHhcc------------------hHHHHHHHHHHHHHHhhhhhhHHHHHhcccC-CCc------hHHHHHHHHH
Confidence 87777666542 4555666666677766655555555556632 344 6899999999
Q ss_pred HHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCc
Q 011743 174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKP 218 (478)
Q Consensus 174 ~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~ 218 (478)
+.|+|..+|..++|.+.+++|+....++.++..++++++.+...+
T Consensus 343 a~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 343 AFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999988888877665443
No 145
>PRK15075 citrate-proton symporter; Provisional
Probab=99.27 E-value=8e-11 Score=122.01 Aligned_cols=151 Identities=15% Similarity=0.135 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHH-HHH
Q 011743 22 VLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLV-MLT 100 (478)
Q Consensus 22 ~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~-~~~ 100 (478)
...++....++.+..++|.|+++.+|++..++++......++..++.+++|+++|| +||||.+..+..+..+... ...
T Consensus 245 ~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr-~g~r~~~~~~~~~~~~~~~~~~~ 323 (434)
T PRK15075 245 LMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDR-IGRRPVLIAFTVLAILTAYPALS 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHHH
Confidence 34445566778888999999999899999999999989999999999999999999 8999998876554433221 111
Q ss_pred HHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHH-HHH
Q 011743 101 IQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT-LAA 179 (478)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~-~g~ 179 (478)
.... ..+.....+...+.+++.+...+...+++.|.+|++. |++++++.+...+ +++
T Consensus 324 ~~~~----------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~------rg~~~g~~~~~~~~~~g 381 (434)
T PRK15075 324 WLVA----------------APSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV------RTAGFSLAYSLATAIFG 381 (434)
T ss_pred HHHc----------------CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc------cchheeHHHHHHHHHHh
Confidence 1110 1123333344455566667767777788999999888 8999998765554 457
Q ss_pred HHHHHHHHhhhccchh
Q 011743 180 MIGVTAIVYVFIDQGW 195 (478)
Q Consensus 180 ~~~p~i~~~l~~~~~~ 195 (478)
.++|.+.+++.+..|+
T Consensus 382 ~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 382 GFTPAISTWLIHVTGD 397 (434)
T ss_pred hhHHHHHHHHHHhcCC
Confidence 7899999999887775
No 146
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.26 E-value=1.5e-10 Score=121.84 Aligned_cols=180 Identities=17% Similarity=0.174 Sum_probs=132.8
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHH-HHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLT-NFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~ 95 (478)
.|.++...++...+.+....+.+.|+.+++|++..+.+.+.. ...++..++.+++|+++|| +||||.+.++.++.+++
T Consensus 224 ~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr-~g~~~~l~i~~~l~~l~ 302 (491)
T PRK11010 224 AWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQR-LSLFRALMIFGILQGVS 302 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHH
Confidence 344444445555666666678888888889999999999875 5567899999999999999 89999888777665555
Q ss_pred HHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHH
Q 011743 96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT 175 (478)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (478)
.+.+...... ..+...+.+..++..++.|...+...++..+..+++. +++.+++.+...
T Consensus 303 ~l~~~~l~~~---------------~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~------~~t~~gl~~s~~ 361 (491)
T PRK11010 303 NAGYWLLSIT---------------DKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF------SATQFALLSALS 361 (491)
T ss_pred HHHHHHHHhc---------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------cHHHHHHHHHHH
Confidence 4333221100 1133334445556555556555667788888888877 788899999889
Q ss_pred HHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCc
Q 011743 176 TLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKP 218 (478)
Q Consensus 176 ~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~ 218 (478)
++|..+++.+.|++.+..||+..|.+.+++.+++++.....++
T Consensus 362 ~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 362 AVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999988889999999899999999888888887776665543
No 147
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.26 E-value=1.1e-10 Score=121.21 Aligned_cols=170 Identities=16% Similarity=-0.016 Sum_probs=119.5
Q ss_pred HHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 011743 31 FIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHP 110 (478)
Q Consensus 31 ~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 110 (478)
.+.+..+.+ ++.+++|++..+++.......+...++.+++|+++|| +|||+.+.++.++.+++.+++........ .
T Consensus 300 ~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 375 (481)
T TIGR00879 300 INAIMYYSP-TIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDR-FGRRPLLLIGAAGMAICLFVLGILGASFV-T- 375 (481)
T ss_pred CeehHHHHH-HHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHHHHhhccc-C-
Confidence 333344444 4456789999889999999999999999999999999 89999999998888877766653211000 0
Q ss_pred CCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 011743 111 PDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF 190 (478)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~ 190 (478)
..+ +..+...+....+..+.......+...+++.|.+|+++ |+++.++.....++|..++|.+.+.+.
T Consensus 376 ---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~~~~lg~~i~~~~~~~~~ 443 (481)
T TIGR00879 376 ---GSS---KSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSL------RPKGISIAVAANWLANFIVGFLFPTML 443 (481)
T ss_pred ---Ccc---cchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 00012222222222222222334666777899999887 899999999999999999999999998
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhc
Q 011743 191 IDQGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 191 ~~~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
+..+|++.|++.+++.+++.++..+.
T Consensus 444 ~~~~~~~~f~~~~~~~~~~~i~~~~~ 469 (481)
T TIGR00879 444 ESIGVGGVFIFFGGLNVLGLIFVYFF 469 (481)
T ss_pred HhcCccceehhHHHHHHHHHHHHhee
Confidence 88899999988887777666655544
No 148
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.26 E-value=2.4e-09 Score=106.53 Aligned_cols=334 Identities=15% Similarity=0.049 Sum_probs=186.2
Q ss_pred cccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccc-----hhHH-HHHHHHHHHHHHHHHHHHhhcccCCCCCCCC
Q 011743 42 FKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLS-----RFAT-CLVFGTLEVLSLVMLTIQAYSKSLHPPDCGK 115 (478)
Q Consensus 42 l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-----r~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 115 (478)
+..|++++..-.+.......+... ..+..|+.||+ -+ ||.- ++.|..++..+..+.+.+.. .+.+...+.
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~-~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~--~l~~~~~~~ 81 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDT-HPSILGWRRTPYIWGGTLLQAGGLAIAPFALL--LLAESGQQS 81 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhcccccc-CcccCcCCchhhhHHHHHHHHHHHHHHHHHHH--HHccccccc
Confidence 346788888888888887776655 58899999999 56 5544 44556667777666654431 111100000
Q ss_pred CccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccchh
Q 011743 116 SSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGW 195 (478)
Q Consensus 116 ~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~ 195 (478)
+ -+.........++-.+.|+|.+....+..++++|..|+++ |++..++.+.+.-+|..++..+.+.+.+.++.
T Consensus 82 ~-~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~------R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~ 154 (403)
T PF03209_consen 82 S-GPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER------RPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSP 154 (403)
T ss_pred c-cccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh------hhhhHHHHHHHHHHHHHHHHHHHHHHccccCH
Confidence 0 0001122334455566888888888899999999999988 99999999999999999999999977766652
Q ss_pred H-HHHHHHH---HHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhcCCCCCCCchhhhhhhhhhccCcccccC
Q 011743 196 W-LGFLISS---VATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIP 271 (478)
Q Consensus 196 ~-~~f~i~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (478)
. ..=.+.. +...+.++..+-..++.++..+ . .++
T Consensus 155 ~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~---~------------------~~~--------------------- 192 (403)
T PF03209_consen 155 ERLIQVIQGVALIALLLNLIALWGQEPRRSRRAA---A------------------AER--------------------- 192 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCccccc---C------------------CCC---------------------
Confidence 2 2222222 2222222222221111111000 0 000
Q ss_pred CCCccchhhhhccCCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhHhhcchhhhhhhcccCCCCCCcccCC
Q 011743 272 HTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGAYMDPRLGSIKVPT 351 (478)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (478)
++.++.+. |+.+..+ .+.++++ ..+++....+.+-..-+.+ |-=+..+|+. -.+
T Consensus 193 --~~~~f~~a-------------~~~~~~~--~~a~~f~--~fl~l~t~a~~~QD~iLEP-ygg~Vfgmsv------~eT 246 (403)
T PF03209_consen 193 --PRPPFREA-------------WRQVWAS--PQARRFF--VFLFLGTLAFFMQDVILEP-YGGEVFGMSV------GET 246 (403)
T ss_pred --CCccHHHH-------------HHHHHhC--CChhHHH--HHHHHHHHHHHhhHHHcCC-chhHHcCCCH------HHH
Confidence 00001110 0000000 0112221 1222222222221111111 1001111110 011
Q ss_pred CCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHH
Q 011743 352 PSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWL 431 (478)
Q Consensus 352 ~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 431 (478)
..++.....+.++...+.++... || .++.+...+|...+++++......... .+.+.+
T Consensus 247 T~Lta~~~~G~L~G~~~~g~~l~---~~-------~~~~~~a~~G~~~~~~~f~lii~a~~~------------~~~~~~ 304 (403)
T PF03209_consen 247 TRLTAFWGGGTLLGMLLAGFLLS---RR-------LGKKRTAALGCLLGALAFALIILAGPL------------GSPWLF 304 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc---CC-------CCchHHHHHHHHHHHHHHHHHHHHHhc------------ccchHH
Confidence 22334444555555555554322 22 244555667777777777665554211 356778
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHhhcc
Q 011743 432 SFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 476 (478)
Q Consensus 432 ~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~~lg 476 (478)
-...+++|++.++......+...+.++++..|..+|+|...+.++
T Consensus 305 ~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A 349 (403)
T PF03209_consen 305 RPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIA 349 (403)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999988765
No 149
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.25 E-value=1.7e-10 Score=119.57 Aligned_cols=167 Identities=16% Similarity=0.061 Sum_probs=112.8
Q ss_pred HHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH-Hh
Q 011743 25 ALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTI-QA 103 (478)
Q Consensus 25 ~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~-~~ 103 (478)
.+....+|++..++|.|+++++|++..+++....+..+...++.++.|+++|| +|||+.+.++.++.++....... ..
T Consensus 253 ~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~~~ 331 (432)
T PRK10406 253 AAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDK-IGRRTSMLCFGSLAALFTVPILSALQ 331 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 34467788899999999999999999999998888888888999999999999 89999888776654433322211 11
Q ss_pred hcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHH-HHHHH
Q 011743 104 YSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTL-AAMIG 182 (478)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~ 182 (478)
. ..+....+....+...+.+...+...++.+|.+|++. |++++++.+...++ ++...
T Consensus 332 ~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~------r~t~~g~~~~~g~~~~g~~~ 389 (432)
T PRK10406 332 N----------------VSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV------RALGVGLSYAVANALFGGSA 389 (432)
T ss_pred c----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc------cchhhhHHHHHHHHHHHhHH
Confidence 0 0122221121222223333334556678899999988 99999999876654 34558
Q ss_pred HHHHHhhhccch-hHHHHHHHHHHHHHHHHHHHh
Q 011743 183 VTAIVYVFIDQG-WWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 183 p~i~~~l~~~~~-~~~~f~i~~~~~~~~~~~~~~ 215 (478)
|.+.+.+.. .| |...+++.++..+++++..++
T Consensus 390 p~~~~~l~~-~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 390 EYVALSLKS-IGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHHHHH-hCCCcHHHHHHHHHHHHHHHHHHH
Confidence 888886644 45 656666655555555555444
No 150
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.24 E-value=2e-10 Score=119.58 Aligned_cols=185 Identities=17% Similarity=0.102 Sum_probs=152.7
Q ss_pred cchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchh--HHHHHHHHH
Q 011743 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRF--ATCLVFGTL 91 (478)
Q Consensus 14 ~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~--~~~~~~~~~ 91 (478)
.|.+...++..++-+-+..++..+...|.++++|++..+...+..+.++...++.++.|++.|| +|.| +++.+++++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r-~g~k~~~~l~~~l~~ 358 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDR-FGPKTKRTLLISLIL 358 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHHHHH
Confidence 3567777888888899999999999999999999999999999999999999999999999999 8999 888888877
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHH
Q 011743 92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (478)
Q Consensus 92 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~ 171 (478)
..+-.+.-.+.-. + ...| ..+.+.+++.-++.|+..|..++..-++.+++.|+++ .+..|+++
T Consensus 359 ~~~i~~~g~~G~~-~----~~~g------~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~------e~efFgly 421 (477)
T PF11700_consen 359 WIIIPLYGLFGFW-P----SFFG------LKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR------EAEFFGLY 421 (477)
T ss_pred HHHHHHHHHHHhh-h----cccC------cccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch------hhHHHHHH
Confidence 6443322222000 0 0011 1256667778889999999999999999999999988 79999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccch-hHHHHHHHHHHHHHHHHHHHhc
Q 011743 172 LFATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 172 ~~~~~~g~~~~p~i~~~l~~~~~-~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
....-..+.+||.+.|.+.+..| .|.++....++.+++++++...
T Consensus 422 ~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 422 AITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999988765 8999988888878787776554
No 151
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.23 E-value=1.4e-10 Score=114.92 Aligned_cols=184 Identities=14% Similarity=0.073 Sum_probs=149.4
Q ss_pred cchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHH
Q 011743 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (478)
Q Consensus 14 ~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 93 (478)
.|.+|.+.+..+...-++-+...+++.|++++++.++.++|.+...+.....+..+++|+++|| +|.+|++.+..+..+
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR-~Gg~rv~~~~f~~~~ 295 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDR-IGGRRVTLAVFVGMA 295 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhh-ccchhHHHHHHHHHH
Confidence 4679999999999999999999999999999999999999999999999999999999999999 899999888888888
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHH
Q 011743 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (478)
Q Consensus 94 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~ 173 (478)
++........+ .. ++ ..+....+...+.+++..|.-...+..++...+|++ .+...++...
T Consensus 296 ~~~~~l~~~~~--~~-----~~-----~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-------~G~v~G~vga 356 (417)
T COG2223 296 LAAALLSLFLT--GF-----GH-----GGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-------TGAVTGIVGA 356 (417)
T ss_pred HHHHHHHcccc--cc-----cc-----CcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-------hhHHHHHHHH
Confidence 77776665421 00 00 124555555566677777777888888888888753 4788889888
Q ss_pred HHHHHHHHHHHHHHhhhccch-hHHHHHHHHHHHHHHHHHHHhcC
Q 011743 174 ATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLIALAIGK 217 (478)
Q Consensus 174 ~~~~g~~~~p~i~~~l~~~~~-~~~~f~i~~~~~~~~~~~~~~~~ 217 (478)
..++|+..-|...+...+..| +...|++...+.+++.++.+...
T Consensus 357 ~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 357 IGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred hccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999888888888877666 89999988888777777655543
No 152
>PRK10504 putative transporter; Provisional
Probab=99.22 E-value=2.8e-10 Score=119.07 Aligned_cols=158 Identities=11% Similarity=-0.002 Sum_probs=125.4
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
|.....+...++...++.....+.+.|++..+|.++.++++......++..++.++.|+++|| +|||+++..+..+.++
T Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r-~g~~~~~~~~~~~~~~ 339 (471)
T PRK10504 261 RTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNR-FGYRRVLVATTLGLAL 339 (471)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHH
Confidence 345556666677777766666677888887899999999999998888888888999999999 8999999999888877
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (478)
+..++..... ..+...+.+..++.|++.+...+...++..+.+|+++ +++++++.+..
T Consensus 340 ~~~~~~~~~~----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~ 397 (471)
T PRK10504 340 VSLLFMLVAL----------------LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL------ASSGNSLLSMI 397 (471)
T ss_pred HHHHHHhccc----------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh------ccchHHHHHHH
Confidence 7666554321 1133334455677888888888888899999999877 89999999999
Q ss_pred HHHHHHHHHHHHHhhhccchh
Q 011743 175 TTLAAMIGVTAIVYVFIDQGW 195 (478)
Q Consensus 175 ~~~g~~~~p~i~~~l~~~~~~ 195 (478)
.++|..+|+.++|.+.+..++
T Consensus 398 ~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 398 MQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999988665554
No 153
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.21 E-value=2.4e-10 Score=107.03 Aligned_cols=180 Identities=14% Similarity=0.079 Sum_probs=138.1
Q ss_pred cccCCcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHH
Q 011743 9 KQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVF 88 (478)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~ 88 (478)
-.+.+....|++.+...+--...+=....-+.++++.+|+|+..++.+.+.......+..|+.|.++|| .||+...+.+
T Consensus 258 dv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk-~G~n~~wv~~ 336 (459)
T KOG4686|consen 258 DVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDK-YGFNLWWVAS 336 (459)
T ss_pred cccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhh-hcceehhHHH
Confidence 334566678887776665555544444455678999999999999999999999999999999999999 7999888777
Q ss_pred HHHH-HHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhH
Q 011743 89 GTLE-VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASY 167 (478)
Q Consensus 89 ~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~ 167 (478)
..+. .++...+.++ .+.-+.++.++|+...+...+..+.++...|+++ .+++
T Consensus 337 a~~~tl~~H~~l~Ft---------------------~lsPy~~m~~lGLsysllAcslWP~va~~vpE~q------LGTa 389 (459)
T KOG4686|consen 337 ACILTLLGHSGLFFT---------------------FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQ------LGTA 389 (459)
T ss_pred HHHHHHHHhhhHHhh---------------------hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHH------hcch
Confidence 6554 4455555443 2335677888999988888889999999999998 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccch---hHHHHHHHHHHHH-HHHHHHHhc
Q 011743 168 FNFYLFATTLAAMIGVTAIVYVFIDQG---WWLGFLISSVATL-IGLIALAIG 216 (478)
Q Consensus 168 ~~~~~~~~~~g~~~~p~i~~~l~~~~~---~~~~f~i~~~~~~-~~~~~~~~~ 216 (478)
++..+...|+|-.+-|++.|++.+.-| |--.|++....+. ....+.+..
T Consensus 390 ygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 390 YGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred HHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 999999999999999999999987644 4456666555543 333344443
No 154
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.20 E-value=2e-10 Score=107.48 Aligned_cols=155 Identities=12% Similarity=0.194 Sum_probs=119.9
Q ss_pred hHHHHHHHHHHHHHHHHhH--HHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANG--ISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~--~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
..++.+..++..-+|+..= .-+.++++.+.+++.++..++.+.++.-+.+.+.++||+.||.+|-|..-++-+....+
T Consensus 43 ~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~ 122 (459)
T KOG4686|consen 43 FMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFL 122 (459)
T ss_pred HHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHH
Confidence 3334444444444443322 23456777788888888899999999999999999999999998988766666666667
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (478)
|.+.++.... ...++....+|++.|+|.-....+.+.+...+|..++ ....+++....
T Consensus 123 GqliFa~Ggi----------------~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE------Ln~vfGlqlSv 180 (459)
T KOG4686|consen 123 GQLIFAAGGI----------------SHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE------LNFVFGLQLSV 180 (459)
T ss_pred HHHHHHhchH----------------HHHHHHHHhhheeeccCchhhhhhhcceeEEEecCcc------ccchhhHHHHH
Confidence 7766654321 2378999999999999998888999999999999988 89999999999
Q ss_pred HHHHHHHHHHHHHhhhccc
Q 011743 175 TTLAAMIGVTAIVYVFIDQ 193 (478)
Q Consensus 175 ~~~g~~~~p~i~~~l~~~~ 193 (478)
..+|...--.+.+++.++.
T Consensus 181 AR~GstvNf~lm~~ly~~~ 199 (459)
T KOG4686|consen 181 ARLGSTVNFLLMPFLYDTM 199 (459)
T ss_pred HHhhceeeeeecHHHHHHH
Confidence 9999887777777776543
No 155
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.20 E-value=1.6e-10 Score=119.81 Aligned_cols=179 Identities=11% Similarity=0.024 Sum_probs=122.0
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHH
Q 011743 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (478)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~ 95 (478)
..|...+..++.....+++..++|.|+++..|++..++++....+.+...++.+++|+++|| +|+++....+.....+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~~~~~~ 330 (438)
T TIGR00712 252 LLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFKGNRGATGVFFMTLV 330 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcccHHHHHHHHHH
Confidence 35555566666667778888999999999999999999999999999999999999999999 76544323333222221
Q ss_pred ---HHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHH
Q 011743 96 ---LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (478)
Q Consensus 96 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~ 172 (478)
...+.... ..+....+...++.|++.............|.+|+++ |+++.++.+
T Consensus 331 ~~~~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~ 387 (438)
T TIGR00712 331 TIAVIVYWMNP-----------------AGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAGFTG 387 (438)
T ss_pred HHHHHHHHhcC-----------------CCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhh------eeeehhhhc
Confidence 11111111 0122223333444444332222222345678888877 899999998
Q ss_pred HHHHHHH-HHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCc
Q 011743 173 FATTLAA-MIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKP 218 (478)
Q Consensus 173 ~~~~~g~-~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~ 218 (478)
...++|+ .++|.+.|.+.+..||...|++.++..+++.+..++..+
T Consensus 388 ~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 434 (438)
T TIGR00712 388 LFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMI 434 (438)
T ss_pred hHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHh
Confidence 8888774 689999999999889999998877776666665555433
No 156
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.18 E-value=3.5e-10 Score=112.80 Aligned_cols=140 Identities=11% Similarity=0.109 Sum_probs=104.2
Q ss_pred CCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHH
Q 011743 47 HFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAY 126 (478)
Q Consensus 47 g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (478)
|++....+.++.+..++..+++++.||++|| +|||+++...+++..+++++++++. |++ +...-..+
T Consensus 80 ~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~-~GRK~vYG~~liImIi~t~~~~~s~----------~~~--~~~~~m~~ 146 (538)
T KOG0252|consen 80 HYPSGVLALVNAAALVGTIFGQLFFGWLGDK-FGRKKVYGKELIIMIICSALSGLSV----------GTT--SPLGVMMT 146 (538)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhh-hcchhhhhHHHHHHHHHHHHhccCC----------CCC--CCcchhhH
Confidence 4778888999999999999999999999999 8999999999999999998555432 111 11125678
Q ss_pred HHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHH----HHHHHHHHHHHHHHHHhhhcc----------
Q 011743 127 FYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY----LFATTLAAMIGVTAIVYVFID---------- 192 (478)
Q Consensus 127 ~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~----~~~~~~g~~~~p~i~~~l~~~---------- 192 (478)
++..|+++|+|.|+=+|...+..+|...+++ |+...+.. .+++-.|+.++-++.+-....
T Consensus 147 L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~------RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~l 220 (538)
T KOG0252|consen 147 LCFFRFLLGIGIGGDYPLSATIMSESANKKT------RGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHL 220 (538)
T ss_pred HHHHHHHhhccccCCCcchHHHhhhhhhhcc------ccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHH
Confidence 8899999999999999999999999877665 66555544 344445555554444433211
Q ss_pred -chhHHHHHHHHHH
Q 011743 193 -QGWWLGFLISSVA 205 (478)
Q Consensus 193 -~~~~~~f~i~~~~ 205 (478)
.-||..|.+.++.
T Consensus 221 d~vWRl~~glg~vp 234 (538)
T KOG0252|consen 221 DGVWRIIFGLGAVP 234 (538)
T ss_pred HHHHHHHHHHHHHH
Confidence 2388888765544
No 157
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.17 E-value=7e-10 Score=114.33 Aligned_cols=146 Identities=15% Similarity=-0.000 Sum_probs=107.5
Q ss_pred HHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 011743 30 GFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLH 109 (478)
Q Consensus 30 ~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 109 (478)
..+.+..+++.|+.+ .|.++.+.+...+...++..++.++.|+++|| +|||+.+..+.++..++.++.....
T Consensus 246 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~------ 317 (426)
T PRK12307 246 ANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADR-IGLKKTFSIGLLMSFLFIFPLFRIP------ 317 (426)
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHc------
Confidence 334466788888876 59999999999999999999999999999999 8999999988877666554443221
Q ss_pred CCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Q 011743 110 PPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYV 189 (478)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l 189 (478)
......+....+..+.+..+..+..+.++.|.+|+++ |++++++.+...++|..++|.+.|++
T Consensus 318 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~~~~~gp~~~g~l 380 (426)
T PRK12307 318 -----------QDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV------RGLGTGLIYNLAATSGTFNSMAATWL 380 (426)
T ss_pred -----------cccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH------HhhhhhHHHHHHhHHHHHHHHHHHHH
Confidence 0122222222222222333334556678899999887 99999999999999999999999999
Q ss_pred hccchhHHHHH
Q 011743 190 FIDQGWWLGFL 200 (478)
Q Consensus 190 ~~~~~~~~~f~ 200 (478)
.+..|+....+
T Consensus 381 ~~~~g~~~~~~ 391 (426)
T PRK12307 381 GITMGLGAALT 391 (426)
T ss_pred HHcccHHHHHH
Confidence 98888665433
No 158
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.17 E-value=9e-10 Score=112.10 Aligned_cols=167 Identities=10% Similarity=-0.020 Sum_probs=130.3
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
|..+.+++..++....+.....+++.|+. +.|.+..+.|.+.++..+...+..++.|++.|| +|+|+.+..+.+..++
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRR-WSARDLLLLSAICGVV 282 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHH
Confidence 44566666666666666667788888985 589999999999998889999999999999999 8999999999988888
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHH-H
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL-F 173 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~-~ 173 (478)
+.+++...+ +.+.+++..++.|++.+...+....++.+. ++++ +++.++.+. .
T Consensus 283 ~~~~~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~ 336 (382)
T PRK11128 283 RWGLMGSTT-------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSE------VIRLQALYSAL 336 (382)
T ss_pred HHHHHHhhh-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh------hHHHHHHHHHH
Confidence 776665443 677778889999999998888888887776 4444 567788776 4
Q ss_pred HHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 011743 174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGL 210 (478)
Q Consensus 174 ~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~ 210 (478)
...+|..+||.++|.+.+..|+ ..|+..+++.++++
T Consensus 337 ~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 337 AMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 4567889999999999998887 45555555444443
No 159
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.16 E-value=1.9e-09 Score=110.51 Aligned_cols=171 Identities=12% Similarity=-0.005 Sum_probs=126.6
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~ 96 (478)
++...+...+....++......|.|+.+++|+++.+.+.......++..++.++.|+++|| +|+|+.+.++.++..++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r-~~~~~~~~~~~~~~~~g~ 295 (406)
T PRK15402 217 FVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSR-RPLRSLIRMGLWPMVAGL 295 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHH
Confidence 4544554445555555555667888888899999999988888888888999999999999 899999999988888877
Q ss_pred HHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 011743 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (478)
.+........ ..+...++++.++.++|.+...+......... ++++ +++..+.++....
T Consensus 296 ~~~~~~~~~~--------------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~------~g~~~~~~~~~~~ 354 (406)
T PRK15402 296 LLAALATVIS--------------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVS------KGTVSAAMGMLSM 354 (406)
T ss_pred HHHHHHHHcc--------------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-cccc------ccHHHHHHHHHHH
Confidence 7766542100 12455667888889999988777766655433 3355 8999999999999
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 011743 177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIG 209 (478)
Q Consensus 177 ~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~ 209 (478)
+|..+|+.+.+.+.+..++....+...+..++.
T Consensus 355 ~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 355 LIFTVGIELSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 999999999999877767665555444444433
No 160
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.16 E-value=7.6e-10 Score=112.64 Aligned_cols=169 Identities=15% Similarity=0.036 Sum_probs=117.7
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~ 96 (478)
.+..+...++...+.+....+++.|+.+.+|+++.+.+...+...++..++.++.|++.|| +|+|+.+.++..+.+++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r-~~~~~~~~~~~~~~~i~~ 279 (382)
T PRK10091 201 PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGR-YSPLRIAAVTDFIIVLAL 279 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccc-cCchhHHHHHHHHHHHHH
Confidence 4444444455555555556677888888899999999999999999999999999999999 899999999888888877
Q ss_pred HHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCC-CCCChhhhhhhhhHHHHHHHHH
Q 011743 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQF-DENDPKGAKALASYFNFYLFAT 175 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~-~~~~~~~~~~r~~~~~~~~~~~ 175 (478)
++...... +.+...+..++.++|.+...+.......+.. +++. ++.+ ......
T Consensus 280 ~~~~~~~~------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~ 333 (382)
T PRK10091 280 LMLFFFGG------------------MKTASLIFAFICCAGLFALSAPLQILLLQNAKGGEL------LGAA--GGQIAF 333 (382)
T ss_pred HHHHHHHh------------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchH------HHHH--HHHHHH
Confidence 65543321 3334445555566665544443333333333 3222 3333 335567
Q ss_pred HHHHHHHHHHHHhhhcc-chhHHHHHHHHHHHHHHHHH
Q 011743 176 TLAAMIGVTAIVYVFID-QGWWLGFLISSVATLIGLIA 212 (478)
Q Consensus 176 ~~g~~~~p~i~~~l~~~-~~~~~~f~i~~~~~~~~~~~ 212 (478)
++|..+||.++|++.+. .+|+..+.+.++..++.+..
T Consensus 334 ~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 371 (382)
T PRK10091 334 NLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSS 371 (382)
T ss_pred HHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHH
Confidence 89999999999998874 68999999887666544443
No 161
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.15 E-value=4.8e-10 Score=115.41 Aligned_cols=164 Identities=8% Similarity=-0.121 Sum_probs=116.4
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHccc-ccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHH-HHHHHHHH
Q 011743 16 ACTFVFVLSALENMGFIANGISMVLYFKN-EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATC-LVFGTLEV 93 (478)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~v~~~l~~yl~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~-~~~~~~~~ 93 (478)
..|...+..++....++++..++|.|+++ ..|++..+++.......++..++.+++|+++|| +|||+.. ....++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr-~~~r~~~~~~~~~~~~ 321 (412)
T TIGR02332 243 AIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDR-LKERKHHTALPYLFAA 321 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcc-cCccHHHHHHHHHHHH
Confidence 45666777788888899999999999987 357888999999999999999999999999999 8877753 33333444
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHH
Q 011743 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (478)
Q Consensus 94 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~ 173 (478)
++..+. ... . +....+.+..+.++|.....+.......|.+|+++ |++++++.+.
T Consensus 322 ~~~~~~-~~~-----------------~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~a~g~~~~ 376 (412)
T TIGR02332 322 AGWLLA-SAT-----------------D-HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQA------RAIAIAVINA 376 (412)
T ss_pred HHHHHH-Hhc-----------------C-CHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHH------HHHHHHHHHH
Confidence 333222 111 0 11111222223333333333334455567788777 9999999999
Q ss_pred HHHHHHHHHHHHHHhhhccch-hHHHHHHHHHH
Q 011743 174 ATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVA 205 (478)
Q Consensus 174 ~~~~g~~~~p~i~~~l~~~~~-~~~~f~i~~~~ 205 (478)
..++|..++|.+.|.+.+..| |+..|.+.+++
T Consensus 377 ~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 377 TGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred hhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 999999999999999988764 99998876554
No 162
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.15 E-value=1.2e-09 Score=111.54 Aligned_cols=175 Identities=14% Similarity=0.050 Sum_probs=127.3
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHH-HHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFG-STFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
..+..+...++...+......+.+.|+++ .|++++++|.+...... ...++.+++|++.|| +|+||.+..+..+.++
T Consensus 209 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r-~g~~~~l~~~~~~~~~ 286 (390)
T TIGR02718 209 LAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRR-AGLWRTFILGVGLAGS 286 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHH
Confidence 35556666667777777777888888875 79999999999888765 556678999999999 8999999888776644
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCC-CChhhhhhhhhHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDE-NDPKGAKALASYFNFYLF 173 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~-~~~~~~~~r~~~~~~~~~ 173 (478)
.......... ... ..+....+....+.+++.|...+...+...+..++ +. +++.+++.+.
T Consensus 287 ~~~~~~~~~~-~~~------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~ 347 (390)
T TIGR02718 287 LALLWFAQAA-FWL------------APGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQ------AGTDVTAVQS 347 (390)
T ss_pred HHHHHHHHHH-ccc------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc------hHHHHHHHHH
Confidence 3333222110 000 01223334444555666777777777777777665 44 7999999999
Q ss_pred HHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHH
Q 011743 174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLI 211 (478)
Q Consensus 174 ~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~ 211 (478)
..++|..++|.++|++.+..||+..|.+.+++.+++++
T Consensus 348 ~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 348 TRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 99999999999999999988999999887776665544
No 163
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.15 E-value=3.7e-10 Score=113.06 Aligned_cols=154 Identities=13% Similarity=0.021 Sum_probs=128.2
Q ss_pred chhHHHHHHHHHHHHHHHHhH-HHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANG-ISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~-~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 93 (478)
|..+.++...++....+++.. .+.|.|.++.+|.+..+.+.+.....++..++.++.|++.|| +|||+.+..+..+.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~ 288 (365)
T TIGR00900 210 PLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRY-FKRMALMTGAIFVIG 288 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHH
Confidence 345556666666666666666 677888877799999999999999999999999999999999 899999988877777
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHH
Q 011743 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (478)
Q Consensus 94 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~ 173 (478)
++..+..... . +.+.+++..++.|++.+...+...+++.|.+|+++ |++.+++.+.
T Consensus 289 ~~~~~~~~~~-----------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~ 344 (365)
T TIGR00900 289 LAILVVGLTP-----------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL------LGRVFGAQFS 344 (365)
T ss_pred HHHHHHHhhc-----------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHH
Confidence 7666555442 1 35667788889999999999999999999999877 8999999999
Q ss_pred HHHHHHHHHHHHHHhhhccc
Q 011743 174 ATTLAAMIGVTAIVYVFIDQ 193 (478)
Q Consensus 174 ~~~~g~~~~p~i~~~l~~~~ 193 (478)
..++|..++|.++|++.+..
T Consensus 345 ~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 345 LSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999987754
No 164
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.14 E-value=9.2e-08 Score=99.80 Aligned_cols=183 Identities=13% Similarity=-0.032 Sum_probs=114.0
Q ss_pred chhHHHHHHHHHHHH-HHHHhHHHHHHHcccccC----------------------------Cch-hhHhHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENM-GFIANGISMVLYFKNEMH----------------------------FDI-AGASNTLTNFFGST 64 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~-~~~~v~~~l~~yl~~~lg----------------------------~~~-~~~~~~~~~~~~~~ 64 (478)
|+++.=.+-.+.++. ....+..++|.|+++... .+. .-.+..+++..+..
T Consensus 4 ~~i~~W~lyd~ans~f~~~i~t~~~p~~~~~~a~~~g~~~~~~~~~c~~~~~~c~~~~~g~~~~~~s~~~~~~sis~l~~ 83 (477)
T PF11700_consen 4 REIWSWALYDWANSPFATVIVTFFFPPYFQSLAREAGVLPGDPTQPCSDSDDDCVVPFFGSWIDTSSLWLYANSISGLLQ 83 (477)
T ss_pred hHHHHHHHhHhhcccchhhhHHHHHHHHHHHHHHhcccccccccCcccccCCccccccccccccHhHHHHHHHHHHHHHH
Confidence 444544555555552 334455677788776431 111 22357788889999
Q ss_pred HHHhhHHHHHhhhccchhHHHHHHHH-HHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccc
Q 011743 65 FLLCLVGGFISDTYLSRFATCLVFGT-LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRG 143 (478)
Q Consensus 65 ~~~~~~~G~laDr~~Gr~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~ 143 (478)
.+..|+.|-++|+ -|+||-++.... +..+..+++.... ..+.....+..++..++.+....
T Consensus 84 all~P~lGa~aD~-~~~Rk~~l~~~~~~~~~~~~~l~~v~-----------------~~~~~~~~~l~iia~v~~~~~~v 145 (477)
T PF11700_consen 84 ALLAPFLGAIADY-GGRRKRFLLIFTLLGVLATALLWFVS-----------------PGQWWLALVLFIIANVGYEASNV 145 (477)
T ss_pred HHHHHHHHHHHcc-cccchHHHHHHHHHHHHHHHHHHHhC-----------------cchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 787777766654 4445555555443 12444444444455577777778
Q ss_pred cccccccCCCCCCChhhhhh---------------------hhhHHHHHHHHHHHHHHHHHHHHHhhhc--------cch
Q 011743 144 TLPALGAGQFDENDPKGAKA---------------------LASYFNFYLFATTLAAMIGVTAIVYVFI--------DQG 194 (478)
Q Consensus 144 ~~~~~i~~~~~~~~~~~~~~---------------------r~~~~~~~~~~~~~g~~~~p~i~~~l~~--------~~~ 194 (478)
...+++.|..++++. .++. |++..++-+...++|+.+.-.+.-.+.. ..+
T Consensus 146 fyna~LP~la~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~ 224 (477)
T PF11700_consen 146 FYNAYLPDLARPEPR-VRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWA 224 (477)
T ss_pred HHHHHhHhhcCCChh-hhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchh
Confidence 888999999887752 1111 2788888888888888877665544321 133
Q ss_pred hHHHHHHHHHHHHHH-HHHHHhc
Q 011743 195 WWLGFLISSVATLIG-LIALAIG 216 (478)
Q Consensus 195 ~~~~f~i~~~~~~~~-~~~~~~~ 216 (478)
.|..+.+.++-.++. +..+.+.
T Consensus 225 ~r~~~~~~a~ww~vfsiP~~~~~ 247 (477)
T PF11700_consen 225 IRVAFLIVALWWLVFSIPLFLWL 247 (477)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhC
Confidence 577777777665433 3334443
No 165
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.13 E-value=8.5e-10 Score=112.78 Aligned_cols=173 Identities=12% Similarity=0.008 Sum_probs=128.6
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHccccc---CCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHH
Q 011743 16 ACTFVFVLSALENMGFIANGISMVLYFKNEM---HFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE 92 (478)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~l---g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 92 (478)
..+.+++..++....+.......+.|+.+.+ +.+..+.+.+.++..+...++.+..|++.|| +|||+.+.++.++.
T Consensus 216 ~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r-~g~~~~l~~~~~l~ 294 (396)
T TIGR00882 216 KFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINR-IGAKNALLIAGTIM 294 (396)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccchhHHHHHHHH
Confidence 3444444444444444445456777777655 5566778888888888999999999999999 89999999998888
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHH-H
Q 011743 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF-Y 171 (478)
Q Consensus 93 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~-~ 171 (478)
+++..+...+. +.+.+++..++.+++.+........+..+..+++. +++..+. +
T Consensus 295 ~l~~~~~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~at~~~~~~ 349 (396)
T TIGR00882 295 SVRIIGSSFAT-------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL------SATIYLIGF 349 (396)
T ss_pred HHHHHHHHhcC-------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce------EEEeehHHH
Confidence 88776655432 55666777888888876665555566666666555 6666665 4
Q ss_pred HHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 011743 172 LFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (478)
Q Consensus 172 ~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~ 214 (478)
....++|..++|.++|++.+..||+..|.+.+++.++..+...
T Consensus 350 ~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 350 QFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 5678999999999999999988999999998887766555443
No 166
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.12 E-value=6e-10 Score=115.17 Aligned_cols=161 Identities=16% Similarity=0.066 Sum_probs=123.1
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
|..+.+++..++...+++....+.+.|.+..+| +..+.+.+.....++..++.++.|+++|| +|||+++.++.++.++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKK-FGRKILFAGGILLMVL 299 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHH
Confidence 445666677777777776655555666666666 56677788888889999999999999999 8999999999888888
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChh-hhhhhhhHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPK-GAKALASYFNFYLF 173 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~-~~~~r~~~~~~~~~ 173 (478)
+.+.+.... .+...+++..++.+++.+...+...++++|..|.++-+ .++.++..++++..
T Consensus 300 ~~~~~~~~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 361 (437)
T TIGR00792 300 GYLIFFFAG------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTF 361 (437)
T ss_pred HHHHHHHcc------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHH
Confidence 776665432 14455667778889999998999999999987743211 11126889999999
Q ss_pred HHHHHHHHHHHHHHhhhccchh
Q 011743 174 ATTLAAMIGVTAIVYVFIDQGW 195 (478)
Q Consensus 174 ~~~~g~~~~p~i~~~l~~~~~~ 195 (478)
..++|..+++.+.|++.+..||
T Consensus 362 ~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 362 VRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999988765555
No 167
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.11 E-value=8e-10 Score=116.53 Aligned_cols=154 Identities=11% Similarity=0.019 Sum_probs=129.0
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
|.....++..++....+++...+++.|+++.+|+++.++|.......++..++.+++|++.|| +|+|+.+..+.++.++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~g~~~~~~ 337 (495)
T PRK14995 259 RIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSR-LGLRLVATGGMALSAL 337 (495)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHH
Confidence 345556666777777788888899999999999999999999999999999999999999999 8999999989888888
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (478)
+.+++..... ..+.+..+...++.|+|.|...+.....+.+..|+++ ++.+.++++..
T Consensus 338 ~~~~l~~~~~----------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~ 395 (495)
T PRK14995 338 SFYGLAMTDF----------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEK------AAAAGAIETMA 395 (495)
T ss_pred HHHHHHHhcC----------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHh------cchHHHHHHHH
Confidence 7766554321 1134455677888999999998888888888888877 89999999999
Q ss_pred HHHHHHHHHHHHHhhhc
Q 011743 175 TTLAAMIGVTAIVYVFI 191 (478)
Q Consensus 175 ~~~g~~~~p~i~~~l~~ 191 (478)
.++|..+|+.+.+.+.+
T Consensus 396 ~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 396 YELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999987754
No 168
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.11 E-value=1.6e-09 Score=107.13 Aligned_cols=161 Identities=10% Similarity=-0.037 Sum_probs=123.2
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHccc--ccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHH
Q 011743 16 ACTFVFVLSALENMGFIANGISMVLYFKN--EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (478)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~v~~~l~~yl~~--~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 93 (478)
..+..++..++-...-.++..+++.|+.+ ++|+++.+++...+.+..+..++.+++++++|| +|+||++.++..+.+
T Consensus 141 ~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r-~g~~~~l~~~~~l~~ 219 (310)
T TIGR01272 141 HLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPM-ISQGRYLAFNAFLAV 219 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHH
Confidence 34444455555444555677899999975 479999999999999999999999999999999 899999998888777
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHH
Q 011743 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (478)
Q Consensus 94 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~ 173 (478)
++.++..... +.. ...+..+.|++.+.+.|+..+...+.+|++. +++.++. .
T Consensus 220 ~~~~l~~~~~-------------------~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~-------~~asai~-~ 271 (310)
T TIGR01272 220 LLSIGAALTH-------------------GYV-AMWFVLALGLFNSIMFPTIFSLALNALGRHT-------SQGSGIL-C 271 (310)
T ss_pred HHHHHHHHcC-------------------CHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-------hhhHHHH-H
Confidence 7665444322 111 2235557899999999999999999888543 3344443 5
Q ss_pred HHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q 011743 174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVA 205 (478)
Q Consensus 174 ~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~ 205 (478)
...+|+.+.|.+.|.+.+..|.+.+|++..++
T Consensus 272 ~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 272 LAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred HHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 66799999999999999988999988755444
No 169
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.10 E-value=1.2e-08 Score=105.57 Aligned_cols=169 Identities=20% Similarity=0.089 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHHHHhH---HHHHHHcccccCCchhhH-hHHHHHH----HHHHHHHhhHHHHHhhhccchhHHHHHHHHH
Q 011743 20 VFVLSALENMGFIANG---ISMVLYFKNEMHFDIAGA-SNTLTNF----FGSTFLLCLVGGFISDTYLSRFATCLVFGTL 91 (478)
Q Consensus 20 l~~~~~~~~~~~~~v~---~~l~~yl~~~lg~~~~~~-~~~~~~~----~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 91 (478)
+....++..++++... .....+.....+.+.... +...... .+...+..++-|.++|| +|||..+.+.++.
T Consensus 23 ~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~-~grk~~L~~~~~~ 101 (463)
T KOG2816|consen 23 LEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDR-YGRKVVLLLPLFG 101 (463)
T ss_pred HHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhh-hhhhhhHHHHHHH
Confidence 3344444444444444 555566665555544432 3333333 57888899999999999 8999999999998
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHh--ccccccccccccccCCCCCCChhhhhhhhhHHH
Q 011743 92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSL--GCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (478)
Q Consensus 92 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gi--g~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~ 169 (478)
..+..+.+.+. . +++++ +.++ +.+...+...++++|....++ |...++
T Consensus 102 ~~l~~~~~~~~--------------------~-~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~------R~~~~g 151 (463)
T KOG2816|consen 102 TILPALCLLFQ--------------------G-YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEE------RSSSIG 151 (463)
T ss_pred HHHhHHHHHHH--------------------H-HHHhh---hcccccchhhhhhhhhhheeeccchhH------HHHHHH
Confidence 88887777654 2 22322 3333 334456677889999988877 899999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCcc
Q 011743 170 FYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPF 219 (478)
Q Consensus 170 ~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 219 (478)
+.......+..++|..++.+.+..|+-..|+++.+..+++.+...+..|+
T Consensus 152 ll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~E 201 (463)
T KOG2816|consen 152 LLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPE 201 (463)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccc
Confidence 99998999999999999999999999999999998888887766665443
No 170
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.09 E-value=3.8e-09 Score=110.40 Aligned_cols=177 Identities=10% Similarity=-0.019 Sum_probs=124.2
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHH--------H
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATC--------L 86 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~--------~ 86 (478)
+.+|...+..++....++....++|.|+++++|++..+++....+..++..++.+++|+++|| +++||.. .
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~-~~~~~~~~~~~~~~~~ 339 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADF-LKSSKTLSLTAARKIF 339 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCcHHHHHHHH
Confidence 457788888888889999999999999999999999999999999999999999999999999 6654321 1
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhh
Q 011743 87 VFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALAS 166 (478)
Q Consensus 87 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~ 166 (478)
.+......+..++..... ..+....++...+.+.+.+...+.......|..|. . ++.
T Consensus 340 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~------~g~ 396 (465)
T TIGR00894 340 NGIGGLGPGIFAYALPYL----------------SAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-F------LGF 396 (465)
T ss_pred HHHHHHHHHHHHHHHHHc----------------CCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-H------HHH
Confidence 111111111111111110 01233334444555555555555555555565543 4 799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcc---chhHHHHHHHHHHHHHHHHHHHh
Q 011743 167 YFNFYLFATTLAAMIGVTAIVYVFID---QGWWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 167 ~~~~~~~~~~~g~~~~p~i~~~l~~~---~~~~~~f~i~~~~~~~~~~~~~~ 215 (478)
..++.....++|+.++|.+.|++.+. .+|+..|++.++..+++.+....
T Consensus 397 ~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 397 IKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred HHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 99999999999999999999988754 34889999888877777665544
No 171
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.07 E-value=1.1e-09 Score=114.85 Aligned_cols=156 Identities=13% Similarity=0.119 Sum_probs=128.4
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
|..+...+..++..+.+++...++|.|+++.+|+++.+++.......++..++.++.|++.|| +|||+.+.++..+.++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~g~~~~~~ 333 (485)
T TIGR00711 255 RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDK-IDPRKLVTIGLILYAV 333 (485)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcHHHHHHHHHHHHH
Confidence 345555666677778888888899999999999999999999999999999999999999999 8999999999888888
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (478)
+..++..... + ..+.+.++...++.|+|.+...+.......+.+|+++ |+++.++.+..
T Consensus 334 ~~~~~~~~~~-~--------------~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~ 392 (485)
T TIGR00711 334 GFYWRAFTFT-P--------------DTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHK------IARGSSLSNFT 392 (485)
T ss_pred HHHHHhccCC-C--------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HhHHHHHHHHH
Confidence 8776652210 0 1244556667888999999888777777778888777 89999999999
Q ss_pred HHHHHHHHHHHHHhhhcc
Q 011743 175 TTLAAMIGVTAIVYVFID 192 (478)
Q Consensus 175 ~~~g~~~~p~i~~~l~~~ 192 (478)
.++|..+|+.+.+.+.++
T Consensus 393 ~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 393 RQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999887654
No 172
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.06 E-value=5.4e-08 Score=95.48 Aligned_cols=154 Identities=14% Similarity=0.067 Sum_probs=106.5
Q ss_pred ccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccch
Q 011743 43 KNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGA 122 (478)
Q Consensus 43 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (478)
.++.|++.+|++.+.........+..++.|.++|| +||||..+...++++++.+.... .
T Consensus 61 Y~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~-~Grk~~cl~~cily~~scl~k~~--------------------~ 119 (354)
T PF05631_consen 61 YESYGFSEHQIAILFVAGFASSAIFGTFVGSLADR-YGRKKACLLFCILYSLSCLTKHS--------------------S 119 (354)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHhc--------------------c
Confidence 35799999999999999999999999999999999 89999999999999998764432 2
Q ss_pred hHHHHHHHHHHHHhccccccccccccccCCCCCCC-hhhhhhhhhHHHHHH-HHHHHHHHHHHHHHHhhhccch--hHHH
Q 011743 123 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDEND-PKGAKALASYFNFYL-FATTLAAMIGVTAIVYVFIDQG--WWLG 198 (478)
Q Consensus 123 ~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~-~~~~~~r~~~~~~~~-~~~~~g~~~~p~i~~~l~~~~~--~~~~ 198 (478)
+...++++|++.|++......+.-+.......+++ |++. .+.-++... ..+.+-++.+-.++-++.+..+ -..+
T Consensus 120 ~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~--L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaP 197 (354)
T PF05631_consen 120 NYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEW--LSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAP 197 (354)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH--HHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcch
Confidence 78899999999999999998877665443322221 1111 333333322 1122222333333334444444 3778
Q ss_pred HHHHHHHHHHHHHHHHhcCcc
Q 011743 199 FLISSVATLIGLIALAIGKPF 219 (478)
Q Consensus 199 f~i~~~~~~~~~~~~~~~~~~ 219 (478)
|..+.++.+++.++....+++
T Consensus 198 F~~a~~~l~~~~~~I~~~W~E 218 (354)
T PF05631_consen 198 FDAAIVLLAVAAVLILKTWPE 218 (354)
T ss_pred HHHHHHHHHHHHHHHHhcccc
Confidence 888888777777665555443
No 173
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.06 E-value=2.9e-09 Score=112.20 Aligned_cols=172 Identities=17% Similarity=0.069 Sum_probs=145.5
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~ 96 (478)
+...+...++.++....+...+|.+.++++|.+....|++++++.++..++.++.+++.+| +++++.+..+.++++++.
T Consensus 220 l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~-~~~~~lv~~~~~~~a~~~ 298 (524)
T PF05977_consen 220 LRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRR-LSSRRLVLLASLLFALAL 298 (524)
T ss_pred HHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCcchhhHHHHHHHHHHH
Confidence 4444444455555555667788899999999999999999999999999999999999999 899999999998888887
Q ss_pred HHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 011743 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (478)
+.++++. +.+..++..++.|++.........+.+.+..|++. |+|.++++....+
T Consensus 299 ~~lal~~-------------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~------~GRv~si~~~~~~ 353 (524)
T PF05977_consen 299 LLLALSP-------------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWV------RGRVFSIYQMVFF 353 (524)
T ss_pred HHHhcch-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HhHHHHHHHHHHH
Confidence 7777664 66777788889999988888888899999999888 9999999999999
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 011743 177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (478)
Q Consensus 177 ~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~ 214 (478)
.+..+|..+.|.+.+.+|-+..+.++++..+++.++..
T Consensus 354 g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 354 GGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998888776666655544
No 174
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.06 E-value=6.3e-09 Score=106.63 Aligned_cols=173 Identities=17% Similarity=0.157 Sum_probs=113.5
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHH-HHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFF-GSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~-~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~ 95 (478)
.+.+++..++...+......+.+.|+.+++|+++.+.+.+..... ++..++.+++|++.|| +||||.+..+.++..+.
T Consensus 211 ~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r-~g~~~~l~~~~~~~~l~ 289 (402)
T PRK11902 211 AWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVR-LGLYRSLMLFGVLQAVS 289 (402)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHH
Confidence 343444444444333323344556777889999999999887654 4578889999999999 89999988777776665
Q ss_pred HHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHH----HHHhccccccccccccccCCCCCCChhhhhhhhhHHHHH
Q 011743 96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLY----LYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (478)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~ 171 (478)
.+.+...... ..+.+.+++..+ ..+++.+...+....++.+.+|.++ + +.+
T Consensus 290 ~l~~~~~~~~---------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~----~~~ 344 (402)
T PRK11902 290 NLGYWVLAVT---------------PKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ------Y----ALL 344 (402)
T ss_pred HHHHHHHHhc---------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH------H----HHH
Confidence 5443321110 013344444443 4555666667777777887777443 3 344
Q ss_pred HHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHh
Q 011743 172 LFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 172 ~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~ 215 (478)
....++|...++.++|.+.+..||+..|.+.+++.++++++.+.
T Consensus 345 ~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 345 SALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 44456677656668999999999999999888877776655543
No 175
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.05 E-value=6.1e-09 Score=109.05 Aligned_cols=159 Identities=8% Similarity=-0.100 Sum_probs=113.3
Q ss_pred HHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 011743 35 GISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCG 114 (478)
Q Consensus 35 ~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (478)
..+.|.+ .+++|++....++......+...++.+++|+++|| +|||+.++.+.++.+++.+++......
T Consensus 291 ~~~~p~i-~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~g~r~~~i~~~~~~~v~~~~l~~~~~~--------- 359 (479)
T PRK10077 291 LYYAPEI-FKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDK-FGRKPLQIIGALGMAIGMFSLGTAFYT--------- 359 (479)
T ss_pred HHHHHHH-HHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH-hcChHHHHHhHHHHHHHHHHHHHHHhc---------
Confidence 3344444 45688888877877778888899999999999999 899999999999988888776544210
Q ss_pred CCccccchhHHHHHHHHHHHHhcccc-ccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHh-----
Q 011743 115 KSSCLKGAIAAYFYGSLYLYSLGCGG-NRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVY----- 188 (478)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~l~gig~g~-~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~----- 188 (478)
.........+..+.+++.+. ..|...++++|.+|+++ |++++++.+...++|..+++.+.+.
T Consensus 360 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~ 427 (479)
T PRK10077 360 ------QAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI------RGKALAIAVAAQWIANYFVSWTFPMMDKNS 427 (479)
T ss_pred ------CcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhH------HHHHHHHHHHHHHHHHHHHHHHhHHHHhcc
Confidence 00111223344444444443 34777899999999887 9999999998888888877655543
Q ss_pred -hhccchhHHHHHHHHHHHHHHHHHHHhc
Q 011743 189 -VFIDQGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 189 -l~~~~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
+.+..+|+..|++.++..+++.++.+..
T Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (479)
T PRK10077 428 WLVAHFHNGFSYWIYGCMGVLAALFMWKF 456 (479)
T ss_pred chhhhccCccHHHHHHHHHHHHHHHHHhc
Confidence 3456788888888777666665554443
No 176
>TIGR00895 2A0115 benzoate transport.
Probab=99.05 E-value=1.8e-09 Score=109.48 Aligned_cols=146 Identities=16% Similarity=0.088 Sum_probs=114.3
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~ 96 (478)
.+.+.+..++....++.+..+++ ++.+++|.+..+++.......++..++.++.|+++|| +|||+.+....+......
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~ 329 (398)
T TIGR00895 252 TVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADR-LGPRVTALLLLLGAVFAV 329 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHH
Confidence 34445555666677777777777 6677899999999999999999999999999999999 899855544433333332
Q ss_pred HHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 011743 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (478)
.+..... +....++..++.|++.+...+...+++.|.+|+++ |++++++.+...+
T Consensus 330 ~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~ 384 (398)
T TIGR00895 330 LVGSTLF-------------------SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI------RATGVGWAIGIGR 384 (398)
T ss_pred HHHHHhh-------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH------HHHHHHHHHHHHH
Confidence 2222121 44556677788999999999999999999999877 8999999999999
Q ss_pred HHHHHHHHHHHhh
Q 011743 177 LAAMIGVTAIVYV 189 (478)
Q Consensus 177 ~g~~~~p~i~~~l 189 (478)
+|..+||.++|++
T Consensus 385 ~g~~~g~~~~G~l 397 (398)
T TIGR00895 385 LGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHhHHhc
Confidence 9999999998875
No 177
>PRK10133 L-fucose transporter; Provisional
Probab=99.04 E-value=4.8e-09 Score=108.83 Aligned_cols=166 Identities=13% Similarity=0.038 Sum_probs=124.4
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHc-ccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 011743 18 TFVFVLSALENMGFIANGISMVLYF-KNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (478)
Q Consensus 18 ~~l~~~~~~~~~~~~~v~~~l~~yl-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~ 96 (478)
+...+..++...+.++...+++.|+ ++.+|+++.+++.....+.++..++.+++|++.|| +||||++..+.++.+++.
T Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r-~g~~~~l~~~~~~~~~~~ 339 (438)
T PRK10133 261 RWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISR-FAPHKVLAAYALIAMALC 339 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHH
Confidence 3444555566666666777888886 56799999999999999999999999999999999 899999998877776655
Q ss_pred HHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 011743 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (478)
.+..... +. ..+....+.|+|.+...|+..+...+.+|++. +.+.++.. ...
T Consensus 340 ~~~~~~~-------------------~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~-------~~as~l~~-~~~ 391 (438)
T PRK10133 340 LISAFAG-------------------GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDT-------KYGSSFIV-MTI 391 (438)
T ss_pred HHHHHcC-------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhh-------ccchhHHh-HHh
Confidence 4443321 21 22455678999999999999999999987543 34444443 244
Q ss_pred HHHHHHHHHHHhhhccch-hHHHHHHHHHHHHHHHHH
Q 011743 177 LAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLIA 212 (478)
Q Consensus 177 ~g~~~~p~i~~~l~~~~~-~~~~f~i~~~~~~~~~~~ 212 (478)
+|+.++|.+.|.+.+..| -+..|++..+..+..+..
T Consensus 392 ~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 392 IGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred ccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 678888899999988887 788888766654444333
No 178
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.03 E-value=1.7e-09 Score=108.80 Aligned_cols=162 Identities=15% Similarity=0.107 Sum_probs=117.6
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHH--HH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGT--LE 92 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~--~~ 92 (478)
+.++.+.+..++.....+++..+++.|+++++|++..+++.....+.++..++.++.|+++||+.+||+....... ..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~ 295 (379)
T TIGR00881 216 KVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALI 295 (379)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 3456666777777777778888999999999999999999999999999999999999999983333433322211 11
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHH
Q 011743 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (478)
Q Consensus 93 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~ 172 (478)
.++........ ..+.....+..++.|+......+....+..|.+|+++ |+++.++..
T Consensus 296 ~~~~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~ 352 (379)
T TIGR00881 296 IVSLLVYWLNP-----------------AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA------AGTAAGFVG 352 (379)
T ss_pred HHHHHHHhcCc-----------------chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch------hHHHHHHHH
Confidence 12211111110 1133444455566666555555566678899999888 999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccchhHHHH
Q 011743 173 FATTLAAMIGVTAIVYVFIDQGWWLGF 199 (478)
Q Consensus 173 ~~~~~g~~~~p~i~~~l~~~~~~~~~f 199 (478)
...++|..++|.+.|.+.+..||+..|
T Consensus 353 ~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 353 FFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 999999999999999999988988754
No 179
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.03 E-value=1.1e-08 Score=104.69 Aligned_cols=166 Identities=13% Similarity=0.052 Sum_probs=120.5
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHH
Q 011743 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (478)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~ 95 (478)
.++......++...+.++...++++++.+++|++..+.+.+...+.++..++.++.|++.|| .+|+ .+..+..+..+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r-~~~~-~l~~~~~~~~~~ 294 (394)
T PRK10213 217 GVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKR-SVKL-ALAGAPLVLAVS 294 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhc-cchh-HHHHHHHHHHHH
Confidence 35555455555556666666676554556789999999999999999999999999999999 6544 444444443333
Q ss_pred -HHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHH
Q 011743 96 -LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (478)
Q Consensus 96 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (478)
..+....+ +.+.+.+..++.|++.+...+...+++.+..|+ + +++..+..+..
T Consensus 295 ~~~l~~~~~-------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~ 348 (394)
T PRK10213 295 ALVLTLWGS-------------------DKIVATGVAIIWGLTFALVPVGWSTWITRSLAD-Q------AEKAGSIQVAV 348 (394)
T ss_pred HHHHHHHhh-------------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcc-c------HHHHHHHHHHH
Confidence 33333222 456666778889999999999888888888873 3 34566666677
Q ss_pred HHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q 011743 175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIG 209 (478)
Q Consensus 175 ~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~ 209 (478)
.++|..+||.++|++.+..|++..+...++..++.
T Consensus 349 ~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 349 IQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred HHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHH
Confidence 78999999999999999889988888776654433
No 180
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.03 E-value=2.9e-09 Score=107.03 Aligned_cols=153 Identities=14% Similarity=0.004 Sum_probs=118.0
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhcc-chhHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYL-SRFATCLVFGTLEV 93 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~-Gr~~~~~~~~~~~~ 93 (478)
+..+.+.+...+....++++..++|.|+++ .|.+..+.+.+.+.+.++..++.++.|+++|| + +||+.+.++.++.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr-~~~~~~~~~~~~~~~~ 274 (355)
T TIGR00896 197 PLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARR-VKDQRGIVAVLAVLQL 274 (355)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhh-hccchHHHHHHHHHHH
Confidence 445655666666777788888899999875 79999999999999999999999999999999 7 56777777878887
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHH
Q 011743 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (478)
Q Consensus 94 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~ 173 (478)
++.+.+..... +... ....+.|++.|...|...+.+.+..++++ .++..+++.+.
T Consensus 275 ~~~~~~~~~~~------------------~~~~--~~~~l~g~~~g~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~ 329 (355)
T TIGR00896 275 VGLCGLLFAPM------------------HGLW--AWALVLGLGQGGAFPLALTLIGLRSRQAA-----QAAALSAMAQS 329 (355)
T ss_pred HHHHHHHHhhh------------------hHHH--HHHHHHHHhhhhHhHHHHHHHHHhccCHH-----HHHHHHHHHHH
Confidence 77766654421 1111 23567899999988887777766655432 16788888888
Q ss_pred HHHHHHHHHHHHHHhhhccch
Q 011743 174 ATTLAAMIGVTAIVYVFIDQG 194 (478)
Q Consensus 174 ~~~~g~~~~p~i~~~l~~~~~ 194 (478)
..++|..++|.+.|++.+..|
T Consensus 330 ~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 330 IGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 889999999999999988665
No 181
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.01 E-value=3.3e-08 Score=97.79 Aligned_cols=85 Identities=12% Similarity=-0.002 Sum_probs=71.0
Q ss_pred hHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhcc----------
Q 011743 123 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID---------- 192 (478)
Q Consensus 123 ~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~---------- 192 (478)
+...++++.++.|.|.+..+++.++++++..++++ +.+.+++......+|..++|.+++.+...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~ 82 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIET------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVA 82 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhh
Confidence 78889999999999999999999999999998887 88899999999999999999999977621
Q ss_pred ------chhHHHHHHHHHHHHHHHHHH
Q 011743 193 ------QGWWLGFLISSVATLIGLIAL 213 (478)
Q Consensus 193 ------~~~~~~f~i~~~~~~~~~~~~ 213 (478)
.+|++++++.+.+..+..+++
T Consensus 83 ~~~~~~~~~~~~yl~ia~~~~~~~i~~ 109 (310)
T TIGR01272 83 TANAEAAKVHTPYLLLAGALAVLAIIF 109 (310)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468899886655544443333
No 182
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.01 E-value=5e-09 Score=110.70 Aligned_cols=167 Identities=13% Similarity=0.067 Sum_probs=109.3
Q ss_pred HHHHHHHHHHhHHHHHHHcccccCCchhhHhH------------HHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHH
Q 011743 24 SALENMGFIANGISMVLYFKNEMHFDIAGASN------------TLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL 91 (478)
Q Consensus 24 ~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~------------~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 91 (478)
.++..+.+|++..+.|.+++ +.|++..+++. ...+..++..++.++.++++|| +|||++++++.++
T Consensus 297 ~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr-~gRR~~l~~~~~~ 374 (502)
T TIGR00887 297 WFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDI-IGRKPIQLMGFFI 374 (502)
T ss_pred HHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcchhHHHHHHHH
Confidence 34456677888888888775 67876543221 1223334555677889999999 8999999988888
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHH
Q 011743 92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (478)
Q Consensus 92 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~ 171 (478)
.+++.+++...... ......+....+...++..+..+....+.+|.+|.+. |+++.++.
T Consensus 375 ~~~~~~~l~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~------R~~~~g~~ 433 (502)
T TIGR00887 375 LTVLFFVLGFAYNH---------------LSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRY------RSTAHGIS 433 (502)
T ss_pred HHHHHHHHHHHHHh---------------cchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhH------HHHHHHHH
Confidence 77776655543210 0011111111111222222334556677899999988 99999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcc----------chhHHHHHHHHHHHHHHHHHH
Q 011743 172 LFATTLAAMIGVTAIVYVFID----------QGWWLGFLISSVATLIGLIAL 213 (478)
Q Consensus 172 ~~~~~~g~~~~p~i~~~l~~~----------~~~~~~f~i~~~~~~~~~~~~ 213 (478)
+...++|++++|.+.+++.+. .++...|++.++..+++.+..
T Consensus 434 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~ 485 (502)
T TIGR00887 434 AASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT 485 (502)
T ss_pred HHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHh
Confidence 999999999999999988763 345567777666666554443
No 183
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.01 E-value=5.7e-09 Score=107.01 Aligned_cols=154 Identities=14% Similarity=0.065 Sum_probs=113.2
Q ss_pred HhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 011743 33 ANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPD 112 (478)
Q Consensus 33 ~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 112 (478)
....++|.|+++..| ++.+.+.+.+...+.........+++.||+++.++.+..+.++.+++..++...+
T Consensus 226 ~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~--------- 295 (400)
T PRK11646 226 QVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS--------- 295 (400)
T ss_pred HHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh---------
Confidence 344577888877666 6778888887777666555544455555437777777788888887776665543
Q ss_pred CCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 011743 113 CGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID 192 (478)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~ 192 (478)
+...+.+...+.++|.+...|...+++.|..|+++ |++.++++....++|..+||.++|++.+.
T Consensus 296 ----------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 296 ----------NLQQLFTLICLFYIGSIIAEPARETLSASLADARA------RGSYMGFSRLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred ----------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc------chhhhhHHHHHHHHHHHhcccchHHHHHH
Confidence 44555666777888888888999999999999888 99999999999999999999999999875
Q ss_pred c---h-hHHHHHHHHHHHHHHHHH
Q 011743 193 Q---G-WWLGFLISSVATLIGLIA 212 (478)
Q Consensus 193 ~---~-~~~~f~i~~~~~~~~~~~ 212 (478)
. + ....|.+.+++.+++.+.
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 360 GKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HhhcCCcchHHHHHHHHHHHHHHH
Confidence 3 2 345665555555545444
No 184
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.01 E-value=1e-08 Score=105.87 Aligned_cols=186 Identities=12% Similarity=-0.008 Sum_probs=130.9
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
+.+|.+.+..++...+|.+...++|.|+++++ +.........+..+...+..|++|+++|| +|+||++.++.+..++
T Consensus 252 ~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADR-iG~~~vl~~~~i~~~i 328 (462)
T PRK15034 252 LHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDK-FGGVRVTLINFIFMAI 328 (462)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHh-cCchHHHHHHHHHHHH
Confidence 45888888888887787778889999988765 33333333455678899999999999999 8999999999887777
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCC----------C-----hh
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDEN----------D-----PK 159 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~----------~-----~~ 159 (478)
......... |.. + ..+...+.+..+...++.|.-..++..++.+.+|++ + .+
T Consensus 329 ~~~~~~l~l--p~~-------~----~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~ 395 (462)
T PRK15034 329 FSALLFLTL--PGT-------G----SGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQRE 395 (462)
T ss_pred HHHHHHHHh--ccc-------c----ccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhH
Confidence 664433322 100 0 125666666666666777777778888888888741 0 01
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccc-hhHHHHHHHHHHHHHHHHHHHhc
Q 011743 160 GAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ-GWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 160 ~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~-~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
.|+..+...|+......+|+.+-|.+.|...+.. ++...|+...+..++++++.+..
T Consensus 396 ~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 396 AVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred HHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 1223567777888888888888887777665543 48888888888888777766543
No 185
>PRK10054 putative transporter; Provisional
Probab=99.01 E-value=4.7e-09 Score=107.40 Aligned_cols=170 Identities=15% Similarity=-0.024 Sum_probs=126.8
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcc--cccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFK--NEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE 92 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~--~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 92 (478)
|..+...+..++..+.+.....+++.|+. ++.+.+....+.+.....+......+..|++.|| .++|+.+..+.++.
T Consensus 206 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~l~~~~~~~ 284 (395)
T PRK10054 206 KALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNA-ANIRPLMTAGTLCF 284 (395)
T ss_pred ceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHcc-CCchhHHHHHHHHH
Confidence 34455555556555555545455666654 3456667777888888888777888899999999 89999999998888
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHH
Q 011743 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (478)
Q Consensus 93 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~ 172 (478)
.++...+.... .+.+.+.++..+.++|.+...|...+.+.+..|++. |+++++...
T Consensus 285 ~~~~~~~~~~~------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~------~~~~~~~~~ 340 (395)
T PRK10054 285 VIGLVGFIFSG------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGM------KASYFSAQS 340 (395)
T ss_pred HHHHHHHHHcc------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCccc------ceehHhHHH
Confidence 88876665432 145556677889999998888988899999999877 788887543
Q ss_pred HHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 011743 173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGL 210 (478)
Q Consensus 173 ~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~ 210 (478)
...+|..+||.++|.+.+..|....|.+.++...++.
T Consensus 341 -~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~ 377 (395)
T PRK10054 341 -LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAW 377 (395)
T ss_pred -HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHH
Confidence 5668999999999999998898888877555444333
No 186
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.01 E-value=1.5e-08 Score=102.52 Aligned_cols=162 Identities=12% Similarity=0.024 Sum_probs=117.5
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~ 96 (478)
.+...+...+....++....+.+.|+++++|.++.+++.+.....++..++.++.|++.|| +|||+.+..+..+..++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~ 286 (385)
T TIGR00710 208 FWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKK-WGAKSLLRMGLILFAVSA 286 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHH
Confidence 4444555555566666777778888888999999999999999999999999999999999 899999999888888777
Q ss_pred HHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 011743 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (478)
.++......+ ......+++...+.|++.+...+...+...|..| ++ ++++.++......
T Consensus 287 ~~~~~~~~~~--------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~~~~ 345 (385)
T TIGR00710 287 VLLEITAILG--------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HV------AGTASALFGTLRL 345 (385)
T ss_pred HHHHHHHHhc--------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-cc------chHHHHHHHHHHH
Confidence 6665432100 0134445556677889889888888888888776 44 7888888876665
Q ss_pred H-HHHHHHHHHHhhhccchhHHHHHH
Q 011743 177 L-AAMIGVTAIVYVFIDQGWWLGFLI 201 (478)
Q Consensus 177 ~-g~~~~p~i~~~l~~~~~~~~~f~i 201 (478)
. |...+|. .+.+.+..+|...+..
T Consensus 346 ~~g~i~~~~-~~~~~~~~~~~~~~~~ 370 (385)
T TIGR00710 346 VLGAIVGYL-VSLIHGNTAWPMSLSC 370 (385)
T ss_pred HHHHHHHHH-HHhccccChHHHHHHH
Confidence 4 5555555 4455444445444443
No 187
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.98 E-value=8.2e-09 Score=119.80 Aligned_cols=164 Identities=13% Similarity=-0.010 Sum_probs=130.8
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchh-hHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIA-GASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
.++..++..++.....+.+..+++.|+.+.+|++.. +.+++.+...++..++.++.|+++|| +++++.+.++.++.++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r-~~~~~~~~~~~~~~~~ 311 (1146)
T PRK08633 233 VLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGR-HIELGLVPLGALGLAL 311 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCC-ceEccchhHHHHHHHH
Confidence 344444445555555566777889999999999999 99999999999999999999999999 8999999888888877
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (478)
+.+++.... +.+.+++..++.|++.++..+...+++.+..|++. |++++++.+..
T Consensus 312 ~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------rg~~~~~~~~~ 366 (1146)
T PRK08633 312 SLFLLPTAP-------------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE------LGKVLAANNFL 366 (1146)
T ss_pred HHHHHHHhh-------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc------hhhhhHHHHHH
Confidence 776666543 55667777888999999999999999999999888 99999999999
Q ss_pred HHHHHHHHHHHHHhhhc-cchhHHHHHHHHHH
Q 011743 175 TTLAAMIGVTAIVYVFI-DQGWWLGFLISSVA 205 (478)
Q Consensus 175 ~~~g~~~~p~i~~~l~~-~~~~~~~f~i~~~~ 205 (478)
.++|..+++.+++.+.. .+++...|++.+.+
T Consensus 367 ~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 398 (1146)
T PRK08633 367 QNVGMLLFLALTTLFSGLGLSPAGLFYLIALV 398 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 99999888887776643 23455555554443
No 188
>PRK09848 glucuronide transporter; Provisional
Probab=98.97 E-value=6.2e-09 Score=108.32 Aligned_cols=163 Identities=13% Similarity=0.070 Sum_probs=123.6
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
|..+...+..++...+++......+.|+++.+|.+....++......+...++.++.++++|| +|+|+++.++.++.++
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r-~g~~~~~~~g~~~~~i 306 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVAR-IGKKNTFLIGALLGTC 306 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHH
Confidence 445556666667777777666677778888899877766665555567788899999999999 8999999999998888
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChh-hhhhhhhHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPK-GAKALASYFNFYLF 173 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~-~~~~r~~~~~~~~~ 173 (478)
+.+++.+.. ..+.+.+++..++.++|.+...+...++.+|..|.++-+ .++..+..++.+..
T Consensus 307 ~~~~~~~~~-----------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~ 369 (448)
T PRK09848 307 GYLLFFWVS-----------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSF 369 (448)
T ss_pred HHHHHHHcC-----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHH
Confidence 877665432 125566677788899999999999999999988764321 11225888889889
Q ss_pred HHHHHHHHHHHHHHhhhccchh
Q 011743 174 ATTLAAMIGVTAIVYVFIDQGW 195 (478)
Q Consensus 174 ~~~~g~~~~p~i~~~l~~~~~~ 195 (478)
...+|..+|+.+.+.+.+..||
T Consensus 370 ~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 370 TRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999998877544443
No 189
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.96 E-value=6.3e-09 Score=103.43 Aligned_cols=176 Identities=13% Similarity=0.089 Sum_probs=148.5
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
|.+...++..++-+=+-.++..+...|-..++|++..+..++...-++...+++++.|+|.|| +|.|+++.+++++..+
T Consensus 252 ~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~r-fg~k~vl~~~lvi~~~ 330 (438)
T COG2270 252 KNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDER-FGSKPVLMIGLVILSI 330 (438)
T ss_pred cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCceeehHHHHHHHH
Confidence 467778888999998989999999999999999999999999999999999999999999999 9999999999998887
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (478)
..+...... ....+++.-.+.|...|..++..-++.++.+|+++ -++.|+++...
T Consensus 331 ~~~~~~~~~-------------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k------~~~fFglyalt 385 (438)
T COG2270 331 AALYLIFLE-------------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK------EGRFFGLYALT 385 (438)
T ss_pred HHHHHHHcc-------------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc------ccceeehhhhh
Confidence 766555432 23344555578899999999999999999999988 78999999999
Q ss_pred HHHHHHHHHHHHHhhhccc-hhHHHHHHHHHHHHHHHHHHHhc
Q 011743 175 TTLAAMIGVTAIVYVFIDQ-GWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 175 ~~~g~~~~p~i~~~l~~~~-~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
...+..+||.+.+.+.+.. +-|..+....++..+++++++..
T Consensus 386 gra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v 428 (438)
T COG2270 386 GRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRV 428 (438)
T ss_pred hhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEee
Confidence 9999999999998887654 47777776666666666655443
No 190
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.95 E-value=3.5e-08 Score=98.73 Aligned_cols=136 Identities=10% Similarity=-0.021 Sum_probs=107.2
Q ss_pred HHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 011743 35 GISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCG 114 (478)
Q Consensus 35 ~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (478)
+..+.+|.++.+| +...+-|.+++|.+.+....+.+-|+.|| +|-|.+.+++.++..+|..+=.++.. |.+-
T Consensus 64 ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk-~GLR~a~llgt~ln~iGa~Ir~iss~-p~v~----- 135 (480)
T KOG2563|consen 64 YAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDK-FGLRTALLLGTVLNGIGAWIRLISSL-PFVP----- 135 (480)
T ss_pred ehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcc-cchHHHHHHHHHHHHHHHHHhhhccC-cccc-----
Confidence 3556678888888 77888999999999999999999999999 99999999999999999988777642 1110
Q ss_pred CCccccchhH--HHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 011743 115 KSSCLKGAIA--AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI 191 (478)
Q Consensus 115 ~~~~~~~~~~--~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 191 (478)
..+ ...+.+..+.+..+-.+...-+-+.+-||++++ |..+.....++..+|..++..+...+..
T Consensus 136 -------~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q------ra~A~~~~v~~n~LGvavg~llppilV~ 201 (480)
T KOG2563|consen 136 -------PLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ------RAIATVLGVMGNPLGVAVGFLLPPILVP 201 (480)
T ss_pred -------ccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch------hhhhhhHHHhcchHHHHHHhhccceecC
Confidence 123 366677777777777777776777888999988 8888888777777777777776666543
No 191
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.93 E-value=1.1e-08 Score=118.87 Aligned_cols=183 Identities=11% Similarity=-0.098 Sum_probs=133.6
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
|.++.+++..++..+.++++..++|.|+++.+|.+..+++++.+.+.++..++.++.|+++|+ .++++.+..+.++.++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~-~~~~~~~~~~~~~~~~ 303 (1140)
T PRK06814 225 KRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEG-RITLLYVPIGALLMGL 303 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCC-ceeeeeehHHHHHHHH
Confidence 456666666677777777788899999999999999999999999999999999999999998 6777766666655555
Q ss_pred HHHHHHHHhhcccCCCCCC--CCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDC--GKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~ 172 (478)
+.+.+.+.. .....++.+ .....-...+.+.++++.++.|++.+...+...+++.+.+|++. |+++++..+
T Consensus 304 ~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~G~v~g~~~ 376 (1140)
T PRK06814 304 FGLDLAFAS-SSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH------RARVIAANN 376 (1140)
T ss_pred HHHHHHhcc-cccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc------ceeeeHHHH
Confidence 444333220 000000000 00000000245667788888999999999999999999999998 999999999
Q ss_pred HHHHHHHHHHHHHHHhhhc-cchhHHHHHHHHHH
Q 011743 173 FATTLAAMIGVTAIVYVFI-DQGWWLGFLISSVA 205 (478)
Q Consensus 173 ~~~~~g~~~~p~i~~~l~~-~~~~~~~f~i~~~~ 205 (478)
...++|..+++.+.+.+.. ..++...|++.+++
T Consensus 377 ~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 377 VLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 9999999999999988863 35666666655444
No 192
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.93 E-value=3e-08 Score=102.52 Aligned_cols=162 Identities=15% Similarity=0.143 Sum_probs=133.4
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
|....+++..++...+........+.|.+..+|.+ ...+.+.....+...++.++.++++|| +|+||++..+.++.++
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r-~gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKR-FGKKKVYIIGLLLAAL 302 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHH-ccceeehhhhHHHHHH
Confidence 55677788888888888777778888888888877 566788888999999999999999999 8999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChh-hhhhhhhHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPK-GAKALASYFNFYLF 173 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~-~~~~r~~~~~~~~~ 173 (478)
+.+++.+.. ..+.+.+++..++.|++.+...+...++++|..+.++.+ .+++.+..++.+..
T Consensus 303 ~~~~~~~~~-----------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~ 365 (428)
T PF13347_consen 303 GFLLLFFLG-----------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSF 365 (428)
T ss_pred HHHHHHHHH-----------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhh
Confidence 988877664 137788889999999999999999999999999865422 12235788888888
Q ss_pred HHHHHHHHHHHHHHhhhccchh
Q 011743 174 ATTLAAMIGVTAIVYVFIDQGW 195 (478)
Q Consensus 174 ~~~~g~~~~p~i~~~l~~~~~~ 195 (478)
...+|..+++.+.+.+.+..||
T Consensus 366 ~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 366 FIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred hhHHHHHHHHHHHHHHHHHhCc
Confidence 9999999999988877554443
No 193
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.92 E-value=9.6e-09 Score=103.30 Aligned_cols=143 Identities=15% Similarity=0.105 Sum_probs=112.0
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHH-HHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFF-GSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~-~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~ 95 (478)
.+.+.+..++...+++.+..+++.|+++ +|++..+.+.+..+.. +...++.+++|+++|| +||||.+..+.++.+++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r-~g~~~~l~~~~~~~~~~ 288 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQP-LNILYALLLFGIVQALT 288 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHH
Confidence 5666666777788888889999999987 9999999998888766 5678999999999999 89999999898888777
Q ss_pred HHHHHHH-hhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHH
Q 011743 96 LVMLTIQ-AYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (478)
Q Consensus 96 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (478)
..+.... .+.+. .+ .| ..+.+.+....++.+++.+...+...+++.|.+|+++ |++.+++++..
T Consensus 289 ~~~~~~~~~~~~~--~~-~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~ 353 (356)
T TIGR00901 289 NAGFVWLASNGHH--DG-IT------FPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF------GATQMALLSSL 353 (356)
T ss_pred HHHHHHHHhcCcc--cc-cc------cchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc------cHHHHHHHHHH
Confidence 6655432 11000 00 00 0145667777888899999999999999999999999 99999998776
Q ss_pred HH
Q 011743 175 TT 176 (478)
Q Consensus 175 ~~ 176 (478)
.|
T Consensus 354 ~~ 355 (356)
T TIGR00901 354 SA 355 (356)
T ss_pred Hh
Confidence 55
No 194
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.91 E-value=5.6e-08 Score=99.62 Aligned_cols=189 Identities=13% Similarity=0.043 Sum_probs=142.5
Q ss_pred cccccCCcchhHHHHHHHHHHHHHHHHhHHHHHHHccc-ccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccch-hHH
Q 011743 7 GIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKN-EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSR-FAT 84 (478)
Q Consensus 7 ~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr-~~~ 84 (478)
.+..|.+||.++...+..++..+.+..+.+..-.|+++ +.+-+.+-.|++.++..++..++.|+.|+...| .|+ |+-
T Consensus 26 ~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k-~~~~k~P 104 (488)
T KOG2325|consen 26 LDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNK-TGSVKKP 104 (488)
T ss_pred ccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccc-cCCcccC
Confidence 34557789999999999999999988888888889875 467777788999999999999999999999999 675 777
Q ss_pred HHHHHHHHHHHHHHH-HHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhh
Q 011743 85 CLVFGTLEVLSLVML-TIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKA 163 (478)
Q Consensus 85 ~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~ 163 (478)
++.|.++.++|.++. .++.. | ....+.++++|++.|+|.|. .+..-+++++....++
T Consensus 105 li~s~ii~~~g~llY~~l~~~-~--------------~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~d------ 162 (488)
T KOG2325|consen 105 LIVSFLIAIIGNLLYLALAYV-P--------------NGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVED------ 162 (488)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-c--------------cchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccc------
Confidence 888999999999888 44431 1 12678889999999999655 4566788888777777
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhh----ccc---------hhHHHHHHHHHHHHHHHHHHHhcCc
Q 011743 164 LASYFNFYLFATTLAAMIGVTAIVYVF----IDQ---------GWWLGFLISSVATLIGLIALAIGKP 218 (478)
Q Consensus 164 r~~~~~~~~~~~~~g~~~~p~i~~~l~----~~~---------~~~~~f~i~~~~~~~~~~~~~~~~~ 218 (478)
|.++++....+..+|..+||.+...+. +.+ -|..+-++.+++.++..+......+
T Consensus 163 R~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~ 230 (488)
T KOG2325|consen 163 RPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFK 230 (488)
T ss_pred hHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhhee
Confidence 778888777766666666666554332 111 1445666677777666665554433
No 195
>TIGR00898 2A0119 cation transport protein.
Probab=98.91 E-value=1.5e-08 Score=107.08 Aligned_cols=144 Identities=12% Similarity=-0.046 Sum_probs=104.3
Q ss_pred cccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchh
Q 011743 44 NEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAI 123 (478)
Q Consensus 44 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (478)
+.++.+.... .....+....+.++++++.|| +|||+.+.++.++.+++.+++..... ..
T Consensus 351 ~~~~~~~~~~---~~~~~~~~i~~~~~~~~l~dr-~grr~~~~~~~~~~~~~~l~~~~~~~-----------------~~ 409 (505)
T TIGR00898 351 GNLGGNIYLD---LFISGLVELPAKLITLLLIDR-LGRRYTMAASLLLAGVALLLLLFVPV-----------------DL 409 (505)
T ss_pred cccCCChHHH---HHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHcCC-----------------Cc
Confidence 3455554333 334456677788899999999 89999999999888887776665431 12
Q ss_pred HHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q 011743 124 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISS 203 (478)
Q Consensus 124 ~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~ 203 (478)
....++..++.+++.+...+...++.+|.+|++. |++++++......+|..++|.+.+ +. ..++..++++.+
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~~ 481 (505)
T TIGR00898 410 YFLRTALAVLGKFGITSAFQMVYLYTAELYPTVV------RNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLFG 481 (505)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHH------HhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHHH
Confidence 2333444455666666677888899999999887 899999999999999999999988 44 356777777777
Q ss_pred HHHHHHHHHHHhc
Q 011743 204 VATLIGLIALAIG 216 (478)
Q Consensus 204 ~~~~~~~~~~~~~ 216 (478)
+..+++.+...+.
T Consensus 482 ~~~~~~~~~~~~l 494 (505)
T TIGR00898 482 GLALLAGILTLFL 494 (505)
T ss_pred HHHHHHHHHHHcC
Confidence 7666665554443
No 196
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.91 E-value=5e-08 Score=99.80 Aligned_cols=160 Identities=9% Similarity=-0.085 Sum_probs=118.0
Q ss_pred HHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccc
Q 011743 28 NMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKS 107 (478)
Q Consensus 28 ~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~ 107 (478)
..........++.|+++.+|.++.+.|.+.....++..++.++.|++.|| .++++.+..+.. ..+...++....
T Consensus 218 ~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~-~~~~~~~~~g~~-~~~~~~~~~~~~---- 291 (393)
T PRK11195 218 WGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTL-ETVLRVLPAGIL-MGLVVLLMALQH---- 291 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcC-CcccchHHHHHH-HHHHHHHHHHHh----
Confidence 34444555667778888899999999999999999999999999999999 899988877753 333333333222
Q ss_pred CCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 011743 108 LHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIV 187 (478)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~ 187 (478)
+.+...+..++.|++.+...++..+.+.+..|++. .++++++..+...++|..++..+.+
T Consensus 292 ---------------~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~-----~~g~~~a~~~~~~~~~~~~~~~~~~ 351 (393)
T PRK11195 292 ---------------SLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLV-----GAGHSIAVQNFNENLAMLLMLGLYS 351 (393)
T ss_pred ---------------HHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccc-----cchhHHHHHhHHHHHHHHHHHHHHH
Confidence 45556677778999999988888888877544321 1688999999999999999999888
Q ss_pred hhhccchhHHHHHHHHHHHHHHHHHHH
Q 011743 188 YVFIDQGWWLGFLISSVATLIGLIALA 214 (478)
Q Consensus 188 ~l~~~~~~~~~f~i~~~~~~~~~~~~~ 214 (478)
.+ +..|-+..+.+.+...+++..+..
T Consensus 352 ~~-~~~~~~~~~~~~~~~~~~~~~~~~ 377 (393)
T PRK11195 352 LL-VKLGVPVVAVIVGFGLLVALAMAL 377 (393)
T ss_pred HH-HHcCCCHHHHHHHHHHHHHHHHHH
Confidence 66 456766666665555544444433
No 197
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.87 E-value=5.8e-08 Score=98.37 Aligned_cols=167 Identities=8% Similarity=-0.039 Sum_probs=114.9
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchh---HHHHH-HHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRF---ATCLV-FGT 90 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~---~~~~~-~~~ 90 (478)
|..|.+.+..++....+|++..++|.|+++ .|++.. ++....+..+... +..++++|| ..|| +.... ...
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~---~g~~~~~d~-~~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGL---IGVAVIPDR-VARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHH---HHHHHhhHH-hhhhhhHHHHHHHHHH
Confidence 557888888999999999999999999965 678765 5555555444444 445888888 6543 33222 333
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHH
Q 011743 91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF 170 (478)
Q Consensus 91 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~ 170 (478)
+.++...+..... +....++...+.+++.....+...++.+|.+|++. |+++.++
T Consensus 266 ~~a~~~~~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------rgt~~G~ 320 (368)
T TIGR00903 266 LIAAFFLALAFEL-------------------NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL------HGKAAGA 320 (368)
T ss_pred HHHHHHHHHHHcc-------------------ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh------cCcccch
Confidence 3333333332221 22233444455666666666778899999999988 9999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 011743 171 YLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (478)
Q Consensus 171 ~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~ 214 (478)
.+...++|+..+|.+.+.+.. +.+..|.+.++..+++.+..+
T Consensus 321 ~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 321 IGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998887763 666777776666666655543
No 198
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.87 E-value=1e-08 Score=102.08 Aligned_cols=144 Identities=18% Similarity=0.183 Sum_probs=120.7
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCc-hhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFD-IAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~ 95 (478)
.|.++...++..+.++....+++.|+.+++|.+ ..+.+.+..+..+...++.++.|+++|| +|+|+...+......++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~ 286 (352)
T PF07690_consen 208 LWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDR-FGRRRRLLIAILLLILG 286 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHH
Confidence 444555666666677778899999999999999 8999999999999999999999999999 89988888888777776
Q ss_pred HHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHH
Q 011743 96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT 175 (478)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (478)
.+.+..... ..+....++..++.|++.+...+...+++.|.+|+++ |+++.++.....
T Consensus 287 ~~~~~~~~~----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~ 344 (352)
T PF07690_consen 287 ALGLLLLPF----------------SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY------RGTAFGLFNSIG 344 (352)
T ss_dssp HHHHCCSHH----------------HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH------HHHHHHHHHHHH
T ss_pred HHHHHHHHH----------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHH
Confidence 666654331 1245666677888999999999999999999999888 999999999999
Q ss_pred HHHHHHHH
Q 011743 176 TLAAMIGV 183 (478)
Q Consensus 176 ~~g~~~~p 183 (478)
++|..+||
T Consensus 345 ~~~~~igP 352 (352)
T PF07690_consen 345 SLGGIIGP 352 (352)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHCC
Confidence 99999987
No 199
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.85 E-value=4.9e-08 Score=94.99 Aligned_cols=174 Identities=11% Similarity=0.025 Sum_probs=122.0
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHccccc--CC----chhhH-------------hHHHHHHHHHHHHHhhHHHHHh
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEM--HF----DIAGA-------------SNTLTNFFGSTFLLCLVGGFIS 75 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~l--g~----~~~~~-------------~~~~~~~~~~~~~~~~~~G~la 75 (478)
|....+-..-+.++++||+++.......+... |. .+.+. -.=+.+.+++.+-+.+++|++.
T Consensus 326 kttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iv 405 (528)
T KOG0253|consen 326 KTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIV 405 (528)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHH
Confidence 44555666778899999999977665544322 11 11111 1122345677788889999999
Q ss_pred hhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCC
Q 011743 76 DTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDE 155 (478)
Q Consensus 76 Dr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~ 155 (478)
|| +||||+|..+.+++.+..+++..+.. + .....+++.+|+.+ .+.+.+.+.+..|.+|.
T Consensus 406 er-lGRKkTMal~l~~f~iflfll~~c~~-----------r----n~~tvllf~arafi----sg~fqvaYvYtPEVyPT 465 (528)
T KOG0253|consen 406 ER-LGRKKTMALSLILFGIFLFLLTTCKT-----------R----NAYTVLLFTARAFI----SGAFQVAYVYTPEVYPT 465 (528)
T ss_pred HH-hcchhHHHHHHHHHHHHHHHHHHhcC-----------c----chhHHHHHHHHHHH----hchheEEEEecCcccch
Confidence 99 99999999999999988877766531 0 11345566667665 44466788999999999
Q ss_pred CChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhc
Q 011743 156 NDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 156 ~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
.. |+.+.|....+..+|+++.|.++ +...-+-..+.++...+++++.+...++
T Consensus 466 av------RatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcff 518 (528)
T KOG0253|consen 466 AV------RATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFF 518 (528)
T ss_pred hh------hhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheee
Confidence 88 99999999999999999999988 3333344455556666666666555443
No 200
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.85 E-value=1.2e-08 Score=107.20 Aligned_cols=176 Identities=14% Similarity=0.166 Sum_probs=150.0
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccc--hhHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLS--RFATCLVFGTLE 92 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G--r~~~~~~~~~~~ 92 (478)
+..+.+++...+..++++.-..+++.|.+ ..|++..++..++++..+...++.++.|+++|+ .. ++.+..++++..
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~-~~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADK-PGIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCc-cccchHHHHHHHHHHH
Confidence 56777888888999999988899999988 899999999999999999999999999999999 66 344455555566
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHH
Q 011743 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (478)
Q Consensus 93 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~ 172 (478)
.++.+.++.+. +.+.++..-.+.|++.|.+.+..+..+.|..+.++ ...++++..
T Consensus 376 gl~~~~~p~~~-------------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~------l~~a~Gl~l 430 (509)
T KOG2504|consen 376 GLARLFLPFAT-------------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK------LSNAYGLLL 430 (509)
T ss_pred HHHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh------cchHHHHHH
Confidence 66665666554 66777888888999999988888889999999988 899999999
Q ss_pred HHHHHHHHHHHHHHHhhhccch-hHHHHHHHHHHHHHHHHHHHhcC
Q 011743 173 FATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLIALAIGK 217 (478)
Q Consensus 173 ~~~~~g~~~~p~i~~~l~~~~~-~~~~f~i~~~~~~~~~~~~~~~~ 217 (478)
....++..+||.++|++.+..+ |...|+.+++..+++.+.+++..
T Consensus 431 ~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 431 LFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 9999999999999999888776 99999999999888887766654
No 201
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.81 E-value=1.6e-07 Score=95.85 Aligned_cols=70 Identities=10% Similarity=0.047 Sum_probs=59.9
Q ss_pred HhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh
Q 011743 33 ANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQA 103 (478)
Q Consensus 33 ~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~ 103 (478)
....+.+.|+++++|++..+.+.......+...++.++.|++.|| +|||+.+.++..+..++.+++....
T Consensus 221 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~ 290 (392)
T PRK10473 221 TFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGI-FKPRTLMLTSQVLFLAAGITLALSP 290 (392)
T ss_pred HHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555677888899999999999999999999999999999999 8999999999988888877776553
No 202
>PRK09669 putative symporter YagG; Provisional
Probab=98.80 E-value=5.8e-08 Score=100.93 Aligned_cols=161 Identities=11% Similarity=0.079 Sum_probs=108.9
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHH
Q 011743 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (478)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~ 95 (478)
..+.++...++...+........+.|.+..++ ++...+.+.....+...++.++.++++|| +|||+.+..+.+..++.
T Consensus 230 ~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~gk~~~~~~~~~~~~~~ 307 (444)
T PRK09669 230 QWRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGK-FDRVRAFKWTIVAFVIL 307 (444)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHH
Confidence 34444444444444443333333333343343 34444556666677888888999999999 89999999888766654
Q ss_pred HHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChh-hhhhhhhHHHHHHHH
Q 011743 96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPK-GAKALASYFNFYLFA 174 (478)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~-~~~~r~~~~~~~~~~ 174 (478)
........ ..+.+.+++..++.|++.+...+...++++|..+.++.+ .++..+..++.+...
T Consensus 308 ~~~~~~~~-----------------~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~ 370 (444)
T PRK09669 308 SALIFFIP-----------------PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFA 370 (444)
T ss_pred HHHHHHhC-----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHH
Confidence 43333221 125666777788899999999999999999998754321 222246778888889
Q ss_pred HHHHHHHHHHHHHhhhccchh
Q 011743 175 TTLAAMIGVTAIVYVFIDQGW 195 (478)
Q Consensus 175 ~~~g~~~~p~i~~~l~~~~~~ 195 (478)
.++|..+|+.++|++.+..||
T Consensus 371 ~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 371 IKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999988665555
No 203
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.80 E-value=2.6e-07 Score=93.44 Aligned_cols=148 Identities=6% Similarity=-0.074 Sum_probs=99.6
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~ 96 (478)
.+..++...+...+.+....+.+.++.+++|+++.+.+.+.....++..++.++.|+++|| +||||.+..+..+..+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~ 274 (377)
T PRK11102 196 VLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRR-VGALNMLRFGLWIQFIMG 274 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHH
Confidence 3444445555555566666677778888899999999999999999999999999999999 899999998887655443
Q ss_pred HHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHH-
Q 011743 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT- 175 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~- 175 (478)
+.+...... ..+.+...++..+.+.+.+...++....+.|..| ++ +++..+......
T Consensus 275 ~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~~~~ 332 (377)
T PRK11102 275 IWLVVSALL---------------DLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HM------AGTASSLAGTLRF 332 (377)
T ss_pred HHHHHHHHH---------------hhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-cc------chHHHHHHHHHHH
Confidence 333222100 1133444444445555555656666666777665 44 677777765433
Q ss_pred HHHHHHHHHHHH
Q 011743 176 TLAAMIGVTAIV 187 (478)
Q Consensus 176 ~~g~~~~p~i~~ 187 (478)
.+|..+++.+++
T Consensus 333 ~~g~~~g~~~~~ 344 (377)
T PRK11102 333 GIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHh
Confidence 466666666544
No 204
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.78 E-value=9.2e-10 Score=116.30 Aligned_cols=191 Identities=13% Similarity=0.117 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 011743 22 VLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTI 101 (478)
Q Consensus 22 ~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~ 101 (478)
+..++. +..++.......-+++.++++..++|++.+.+-++..+..++..++++| ..|-|.+-+|.++.++|.+++++
T Consensus 10 ~~~~~q-~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~-~hrprwig~g~~~~~~g~~l~~l 87 (539)
T PF03137_consen 10 LLGLFQ-MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGR-GHRPRWIGIGALLMGLGSLLFAL 87 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcceeeecHHHHHHHHHHHhc
Confidence 333344 6666677667778899999999999999999999999999999999999 78889999999999999999886
Q ss_pred HhhcccCCCCC-CC-------C--------------------------CccccchhHHHHHHHHHHHHhccccccccccc
Q 011743 102 QAYSKSLHPPD-CG-------K--------------------------SSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPA 147 (478)
Q Consensus 102 ~~~~~~~~~~~-~~-------~--------------------------~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~ 147 (478)
.++. .+++ ++ . ++..+......++++.++.|+|....++...+
T Consensus 88 Phf~---~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~t 164 (539)
T PF03137_consen 88 PHFL---SGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGIT 164 (539)
T ss_dssp -------------------------------------------------------------------SSS----------
T ss_pred cHhh---cCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceee
Confidence 5432 1111 00 0 00011113578889999999999999999999
Q ss_pred cccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhc---------------------cc-hhHHHHHHHHHH
Q 011743 148 LGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI---------------------DQ-GWWLGFLISSVA 205 (478)
Q Consensus 148 ~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~---------------------~~-~~~~~f~i~~~~ 205 (478)
++=|-.++++ -....++.+.+..+|.++|..+++...+ .. .||..|++.+..
T Consensus 165 YiDDnv~~~~------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~ 238 (539)
T PF03137_consen 165 YIDDNVSKKN------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGIL 238 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eecccccccc------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHH
Confidence 9999999887 7888999999999999999988875531 12 399999998888
Q ss_pred HHHHHHHHHhcCcceeec
Q 011743 206 TLIGLIALAIGKPFYRIQ 223 (478)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~ 223 (478)
.++..+-+..+.|+.++.
T Consensus 239 ~~l~aipl~~FPk~lp~~ 256 (539)
T PF03137_consen 239 LFLSAIPLFFFPKKLPGT 256 (539)
T ss_dssp ------------------
T ss_pred HHHHHHHHHcCCccCCCc
Confidence 777766666655544443
No 205
>PRK11043 putative transporter; Provisional
Probab=98.76 E-value=5.1e-07 Score=92.33 Aligned_cols=153 Identities=7% Similarity=-0.086 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 011743 23 LSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQ 102 (478)
Q Consensus 23 ~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~ 102 (478)
...+....++....+.|.|++ +.|++..+.+.......++..++.++++++.|| +|+|+.+....+..+++.+.+...
T Consensus 211 ~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~ 288 (401)
T PRK11043 211 IFAACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQK-WGGEQLLPWLLVLFAVSVIAIWLA 288 (401)
T ss_pred HHHHHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444555556667777775 579999999998888888889999999999999 899998877766655554433222
Q ss_pred hhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHH
Q 011743 103 AYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIG 182 (478)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 182 (478)
.... ..+....++...+.+++.+...|...+...|..| ++ ++++.++.......++..+
T Consensus 289 ~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~g~~~~~~~~~~~~~ 347 (401)
T PRK11043 289 SLLS--------------HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QA------TGKAAALQNTLQLGLCFLA 347 (401)
T ss_pred HHhc--------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-cc------ChHHHHHHHHHHHHHHHHH
Confidence 1000 1134445556677888888888888887777765 35 7899999988777788888
Q ss_pred HHHHHhhhccchhHHH
Q 011743 183 VTAIVYVFIDQGWWLG 198 (478)
Q Consensus 183 p~i~~~l~~~~~~~~~ 198 (478)
+.+.+.+.+.......
T Consensus 348 ~~~~g~l~~~~~~~~~ 363 (401)
T PRK11043 348 SLLVSALISTPLLTTG 363 (401)
T ss_pred HHHHHHccCCChhHHH
Confidence 8888877664444443
No 206
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.75 E-value=3.4e-07 Score=93.57 Aligned_cols=179 Identities=13% Similarity=0.013 Sum_probs=135.8
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~ 96 (478)
....++..++...+.-....+...|+++.-|.+....+.+.++..++-.+.-.+.+++-.| +|-|+++.++.+..++=.
T Consensus 209 ~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r-~g~~~ll~~a~~~~~vR~ 287 (400)
T PF03825_consen 209 FLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKR-FGIKWLLLLALVAYAVRW 287 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHH
Confidence 4455566666666666677889999886655888888888888888888888999999999 899999999999988877
Q ss_pred HHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHH-H
Q 011743 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA-T 175 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~-~ 175 (478)
.+.......+ ........++..+.|+..|.+..+...++.+..|++. |.++.+++... .
T Consensus 288 ~l~a~~~~~~--------------~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~------~at~Q~l~~~~~~ 347 (400)
T PF03825_consen 288 LLYAYFSDPW--------------PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPEL------RATAQGLYSALSF 347 (400)
T ss_pred HHHHHhcCCc--------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccc------hHHHHHHHHHHHh
Confidence 7776652100 0011223344567999999999999999999999998 99999998865 4
Q ss_pred HHHHHHHHHHHHhhhccch------hHHHHHHHHHHHHHHHHHHHhc
Q 011743 176 TLAAMIGVTAIVYVFIDQG------WWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 176 ~~g~~~~p~i~~~l~~~~~------~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
.+|..+|..++|++.+.+| |...+.+.+++.++..+++++.
T Consensus 348 Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 348 GLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVIL 394 (400)
T ss_pred hHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 6999999999999988765 3345555555555555555444
No 207
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.73 E-value=1.6e-06 Score=86.48 Aligned_cols=128 Identities=16% Similarity=0.033 Sum_probs=90.6
Q ss_pred HHHHHHHcccccCC---ch----hhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHH-HHHHHHHHHHHHHHhhcc
Q 011743 35 GISMVLYFKNEMHF---DI----AGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVF-GTLEVLSLVMLTIQAYSK 106 (478)
Q Consensus 35 ~~~l~~yl~~~lg~---~~----~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~-~~~~~i~~~~~~~~~~~~ 106 (478)
..++|.|+++..+- ++ ...+...++..+...+..|+-|-++|. .|+||-.... .++-.+..+.+.....
T Consensus 35 t~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~-~g~Rk~~~~~f~~i~i~~~~~L~~i~~-- 111 (438)
T COG2270 35 TFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADY-PGPRKKFFGFFTAIGIISTFLLWFIPP-- 111 (438)
T ss_pred eehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhcc-CCCcchHHHHHHHHHHHHHHHHHHhCC--
Confidence 35778888876654 33 344677788888899999999999999 7876655544 4444445555554431
Q ss_pred cCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 011743 107 SLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTA 185 (478)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i 185 (478)
+..+....+...+..++.........+++.|..++++ .++..+.-+....+|+.+.-+.
T Consensus 112 --------------~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~------~~riS~lg~~~gylgs~i~li~ 170 (438)
T COG2270 112 --------------GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN------MGRISGLGWALGYLGSVILLIF 170 (438)
T ss_pred --------------CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc------cCcccccccccccccchHHHHH
Confidence 2366677777788889999999999999999999877 5666666666666666554443
No 208
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.73 E-value=1.1e-06 Score=93.95 Aligned_cols=202 Identities=13% Similarity=0.141 Sum_probs=156.4
Q ss_pred cchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHH
Q 011743 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (478)
Q Consensus 14 ~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 93 (478)
.+...+++....+....+.+++....+-+.+.++++..+.|++.+.+-++..+...+..+.+-| .-|-|.+-+|+++++
T Consensus 95 ~k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r-~HrPr~Ig~G~~~m~ 173 (735)
T KOG3626|consen 95 IKMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSR-GHRPRWIGIGLVLMG 173 (735)
T ss_pred cchHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccc-cCccceeeechhHHH
Confidence 3556666666666666666888888888999999999999999999999999999999999999 789999999999999
Q ss_pred HHHHHHHHHhhc--cc-----------CCC-------------CCC--CCCccc--cc---hhHHHHHHHHHHHHhcccc
Q 011743 94 LSLVMLTIQAYS--KS-----------LHP-------------PDC--GKSSCL--KG---AIAAYFYGSLYLYSLGCGG 140 (478)
Q Consensus 94 i~~~~~~~~~~~--~~-----------~~~-------------~~~--~~~~~~--~~---~~~~~~~~~~~l~gig~g~ 140 (478)
+|.+++.+.+.. +. -.+ +.+ .+.++. +. .-+..++++.++.|+|...
T Consensus 174 lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tp 253 (735)
T KOG3626|consen 174 LGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATP 253 (735)
T ss_pred HHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCC
Confidence 999988765322 00 000 000 000110 01 1345778999999999999
Q ss_pred ccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhc------------------cc-hhHHHHHH
Q 011743 141 NRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI------------------DQ-GWWLGFLI 201 (478)
Q Consensus 141 ~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~------------------~~-~~~~~f~i 201 (478)
.++...+++=|-..+++ -...+++.+.+..+|+++|..++++..+ .. .||..|++
T Consensus 254 i~tlGisYiDDnvk~~~------SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi 327 (735)
T KOG3626|consen 254 IFTLGISYIDDNVKKKN------SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLI 327 (735)
T ss_pred CccCCCccccccccccC------CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHH
Confidence 99999999999887776 7889999999999999999999987742 12 39999999
Q ss_pred HHHHHHHHHHHHHhcCcceee
Q 011743 202 SSVATLIGLIALAIGKPFYRI 222 (478)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~ 222 (478)
++.+.++..+.++++.+.+++
T Consensus 328 ~g~~~~~~a~p~f~fPk~lp~ 348 (735)
T KOG3626|consen 328 CGALLLFSAVPLFFFPKELPK 348 (735)
T ss_pred HHHHHHHHHHHHHhCcccCcc
Confidence 999988888877777555443
No 209
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.70 E-value=1.9e-07 Score=96.87 Aligned_cols=177 Identities=16% Similarity=0.128 Sum_probs=121.2
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccch--------hHHH-
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSR--------FATC- 85 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr--------~~~~- 85 (478)
+.+|.+.+..++++.+++.+..++|.|+++.+|++..+.|+..++-.+...+..+++|.++|| +-+ ||.+
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~-l~~~~ls~t~~rkifn 336 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDR-LTFRILSETTVRKIFN 336 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHH-HhhccCchHhHHHHHH
Confidence 568999999999999999999999999999999999999999999999999999999999999 433 1221
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhh
Q 011743 86 LVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALA 165 (478)
Q Consensus 86 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~ 165 (478)
.++....++..+.+..... . + +......+.++..+.|+..+++. .-..|..| ++ -+
T Consensus 337 ~i~~~~~ai~l~~l~~~~~---~----~------~~~a~~~l~~~~~~~g~~~~Gf~----~~~~~~ap-q~------a~ 392 (466)
T KOG2532|consen 337 TIAFGGPAVFLLVLAFTSD---E----H------RLLAVILLTIAIGLSGFNISGFY----KNHQDIAP-QH------AG 392 (466)
T ss_pred hHHHHHHHHHHHeeeecCC---C----c------chHHHHHHHHHHHHcccchhhhH----hhhhhccc-hH------HH
Confidence 1122222222222222210 0 0 00122222222233333333322 22223233 33 57
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcc---chhHHHHHHHHHHHHHHHHHHHhc
Q 011743 166 SYFNFYLFATTLAAMIGVTAIVYVFID---QGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 166 ~~~~~~~~~~~~g~~~~p~i~~~l~~~---~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
..+++.....++.+.++|.+.+.+.+. ..|+..|++.+++.+++.+.+.+.
T Consensus 393 ~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 393 FVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 899999999999999999999988742 369999999999988887666554
No 210
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.69 E-value=3.3e-07 Score=96.10 Aligned_cols=165 Identities=13% Similarity=0.008 Sum_probs=118.9
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
|..+.+++..++.....+....+.+.|.+..++ +....+.+.....+...++.++.++++|| +|||+++.++.++.++
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKS-LSRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHH
Confidence 556666777777777766666666655554444 56667777777778889999999999999 8999999989887776
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCC-hhhhhhhhhHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDEND-PKGAKALASYFNFYLF 173 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~-~~~~~~r~~~~~~~~~ 173 (478)
+.+.+......+ ..+.+.+++..++.+++.+...+...++++|..|.++ +.+++..+..++...+
T Consensus 309 ~~~~~~~~~~~~--------------~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~ 374 (473)
T PRK10429 309 SCGVLLLMGLAA--------------PHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTM 374 (473)
T ss_pred HHHHHHHHhccC--------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHH
Confidence 665554321000 1245566677778889999999999999999987542 1122224667888888
Q ss_pred HHHHHHHHHHHHHHhhhccchh
Q 011743 174 ATTLAAMIGVTAIVYVFIDQGW 195 (478)
Q Consensus 174 ~~~~g~~~~p~i~~~l~~~~~~ 195 (478)
...+|..+++.+.|++.+..||
T Consensus 375 ~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 375 VVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC
Confidence 8899999999999888654444
No 211
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.69 E-value=7e-07 Score=87.27 Aligned_cols=170 Identities=15% Similarity=0.071 Sum_probs=134.3
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
+..|.+.+..=+.++.||.+..|+|.++. +.|+|.+++|+.++..++......+...++++|.-.+|+.......++.+
T Consensus 208 ~~aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~ 286 (395)
T COG2807 208 PLAWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLV 286 (395)
T ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 44677777777889999999999999987 68999999999999999999999999999999856777777777888888
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (478)
|.+-+.+.. .+...+. .+++|+|.|+.+|....++.+..++.+ + -++..++.+..
T Consensus 287 G~~G~~~~P------------------~~~~~lw--~~llG~G~G~~F~laL~li~~rs~~a~--~---Aa~LSgmaQg~ 341 (395)
T COG2807 287 GLVGLLLAP------------------GQLPILW--ALLLGLGQGGAFPLALTLILLRSSDAA--I---AAALSGMAQGV 341 (395)
T ss_pred HHHHHHHhh------------------hhHHHHH--HHHHhCccchHHHHHHHHHHhhcCChH--H---HHHHHHHhhhh
Confidence 877666553 1222222 589999999999999999999877643 1 45677777777
Q ss_pred HHHHHHHHHHHHHhhhccc-hhHHHHHHHHHHHHHHH
Q 011743 175 TTLAAMIGVTAIVYVFIDQ-GWWLGFLISSVATLIGL 210 (478)
Q Consensus 175 ~~~g~~~~p~i~~~l~~~~-~~~~~f~i~~~~~~~~~ 210 (478)
..+=+.+||.+.|++-|.. +|+.++.......++..
T Consensus 342 GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~ 378 (395)
T COG2807 342 GYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLML 378 (395)
T ss_pred hHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHH
Confidence 7777888999999998765 58887776555544333
No 212
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.68 E-value=3.3e-07 Score=94.26 Aligned_cols=163 Identities=8% Similarity=-0.048 Sum_probs=118.3
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccc-cCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNE-MHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~ 95 (478)
.+..++..++-.....++..+++.|+.+. .+.+...++.....+.....++.+++|+++|| +++||++.++.+..++.
T Consensus 234 ~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r-~~~~~~l~i~~~~~~~~ 312 (410)
T TIGR00885 234 YREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISY-LAAHKVLMAYAIIGMAL 312 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHH
Confidence 44445555555556667778899998653 35555666667777788899999999999999 89999998888888877
Q ss_pred HHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHH
Q 011743 96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT 175 (478)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (478)
.++..... +.. ......+.++..+.++|+..+...+..+++. ......+ .+ .
T Consensus 313 ~ll~~~~~-------------------~~~-~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~------~~~s~~l-~~-~ 364 (410)
T TIGR00885 313 CLGSIFAG-------------------GHV-GLYCLTLCSAFMSLMFPTIYGIALKGLGQDT------KYGAAGL-VM-A 364 (410)
T ss_pred HHHHHHcC-------------------ChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------hhhHHHH-HH-H
Confidence 76666542 212 2455667888888888999999999998655 2222222 22 2
Q ss_pred HHHHHHHHHHHHhhhccc------hhHHHHHHHHHHHHH
Q 011743 176 TLAAMIGVTAIVYVFIDQ------GWWLGFLISSVATLI 208 (478)
Q Consensus 176 ~~g~~~~p~i~~~l~~~~------~~~~~f~i~~~~~~~ 208 (478)
.+|+.+.|.+.|++.|.. +.+..|+++.++...
T Consensus 365 ~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~ 403 (410)
T TIGR00885 365 IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAV 403 (410)
T ss_pred HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHHH
Confidence 399999999999999843 588888887665443
No 213
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.67 E-value=1.4e-07 Score=94.97 Aligned_cols=139 Identities=15% Similarity=0.063 Sum_probs=104.4
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~ 96 (478)
.+.+.+..++....++.+..+++.|+++.+|+++.+++.+.....+...++.+++|+++|| +|||+.+..+......+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~ 305 (366)
T TIGR00886 227 TWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDR-LGGARKLLMSFLGVAMGA 305 (366)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHh-hccchhHHHHHHHHHHHH
Confidence 4555555566666677788899999999999999999999999999999999999999999 899998888877766666
Q ss_pred HHHHHHhhcccCCCCCCCCCccccch-hHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHH
Q 011743 97 VMLTIQAYSKSLHPPDCGKSSCLKGA-IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT 175 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (478)
.++..... .. +....++...+.+++.|...+...+++++.+| ++ +++.+++.....
T Consensus 306 ~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~------~g~~~g~~~~~~ 362 (366)
T TIGR00886 306 FLVVLGLV----------------SPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RA------TGAVSGLVGAIG 362 (366)
T ss_pred HHHHhcCC----------------CcchHHHHHHHHHHHHHHhccccchhhhcchhhch-hh------cccHHHHHHHhc
Confidence 55544321 00 34444455556666667767777788888876 34 789999888777
Q ss_pred HHHH
Q 011743 176 TLAA 179 (478)
Q Consensus 176 ~~g~ 179 (478)
++|+
T Consensus 363 ~~g~ 366 (366)
T TIGR00886 363 NLGG 366 (366)
T ss_pred cCCC
Confidence 7653
No 214
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.66 E-value=9.3e-07 Score=91.53 Aligned_cols=162 Identities=17% Similarity=0.110 Sum_probs=117.7
Q ss_pred HHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhc--c--chhHHHHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 011743 37 SMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY--L--SRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPD 112 (478)
Q Consensus 37 ~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~--~--Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 112 (478)
-...|+++++|+++.+.....+...+. ...-|+.|.++|-+ + .||.-++++.++.+++...+......
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lP-w~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~------- 82 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLP-WSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPAS------- 82 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCc-hHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccc-------
Confidence 344578899999999988766655543 34557889999996 2 35556666776665555555443210
Q ss_pred CCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 011743 113 CGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID 192 (478)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~ 192 (478)
..+.....+..++..+|........-+.+.|....+..+ |+...++.+....+|..++..+.|.+.+.
T Consensus 83 --------~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~----~g~lqS~~~~~~~~G~lv~~~l~G~l~~~ 150 (433)
T PF03092_consen 83 --------ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES----RGDLQSFVWGVRSVGSLVGSLLSGPLLDS 150 (433)
T ss_pred --------cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch----hHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Confidence 124455566778888999999999999999988655422 68889999999999999999999999998
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhcCc
Q 011743 193 QGWWLGFLISSVATLIGLIALAIGKP 218 (478)
Q Consensus 193 ~~~~~~f~i~~~~~~~~~~~~~~~~~ 218 (478)
.+++..|.+.+.+..+..+..++..+
T Consensus 151 ~~~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 151 FGPQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred CCCeEEehHHHHHHHHHHHHHHHhhh
Confidence 89999998887776666555544444
No 215
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.60 E-value=2.2e-06 Score=88.62 Aligned_cols=187 Identities=17% Similarity=0.082 Sum_probs=125.1
Q ss_pred CcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHH
Q 011743 13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE 92 (478)
Q Consensus 13 ~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 92 (478)
..+..+..+...+..+++......+-...+-++-|++..++.+++....+...+..+++.++.|| .|||++++.+..++
T Consensus 267 lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~-~gRRpLll~~~~~~ 345 (485)
T KOG0569|consen 267 LRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDR-LGRRPLLLISLSLM 345 (485)
T ss_pred hhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHH
Confidence 44556666666666666655555555566667889999999999999999999999999999999 89999999999998
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCccccchhHH-HHHHHHHHHHhccccc-cccccccccCCCCCCChhhhhhhhhHHHH
Q 011743 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAA-YFYGSLYLYSLGCGGN-RGTLPALGAGQFDENDPKGAKALASYFNF 170 (478)
Q Consensus 93 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~gig~g~~-~~~~~~~i~~~~~~~~~~~~~~r~~~~~~ 170 (478)
.+..+++.......... ..... ..+++.++..+..+.- .|...-+.+|++|++. |..++++
T Consensus 346 ~~~~~~~~~~~~l~~~~-----------~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~------R~aa~s~ 408 (485)
T KOG0569|consen 346 AVALLLMSIALFLSNSF-----------GSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA------RSAAQSV 408 (485)
T ss_pred HHHHHHHHHHHHHHHHh-----------hhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc------hHHHHHH
Confidence 88887776553210000 00111 2234444544444443 4666788899999988 8899988
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCc
Q 011743 171 YLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKP 218 (478)
Q Consensus 171 ~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~ 218 (478)
......+...+-...-..+.+..|- ..|++..+..++..+..+...|
T Consensus 409 ~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lP 455 (485)
T KOG0569|consen 409 ATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLP 455 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCc
Confidence 8777666665544444455555553 4444444444445555444433
No 216
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.58 E-value=2.4e-06 Score=87.21 Aligned_cols=140 Identities=9% Similarity=-0.065 Sum_probs=99.2
Q ss_pred HHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 011743 35 GISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCG 114 (478)
Q Consensus 35 ~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (478)
....+.|+++.+|+++.+.+.......++..++.++.+++.|| .|++.. .+.....++.+.........
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~-------- 295 (394)
T PRK11652 227 EACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKR-FSTLMW--QSVICCLLAGLLMWIPGWFG-------- 295 (394)
T ss_pred HHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHHHHhc--------
Confidence 3455667888899999999999888888888888999999999 674332 23333333322222111000
Q ss_pred CCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccch
Q 011743 115 KSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG 194 (478)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~ 194 (478)
..+.+.++.+..+.++|.+...|...+...|.+|+ + +++..++.....++|..+++.+++.+.+...
T Consensus 296 ------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~------~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~ 362 (394)
T PRK11652 296 ------VMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPY-L------AGTAGALLGGLQNIGSGLAALLSAMLPQTGQ 362 (394)
T ss_pred ------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-c------chHHHHHHHHHHHHHHHHHHHHHHHccCCch
Confidence 11445567778889999999999999988888873 4 6888888888889999999999998876544
Q ss_pred hHHH
Q 011743 195 WWLG 198 (478)
Q Consensus 195 ~~~~ 198 (478)
+...
T Consensus 363 ~~~~ 366 (394)
T PRK11652 363 FSLG 366 (394)
T ss_pred HHHH
Confidence 4443
No 217
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.56 E-value=1.7e-05 Score=80.02 Aligned_cols=156 Identities=10% Similarity=0.045 Sum_probs=112.7
Q ss_pred HHHHHHcccc-cCCchhhH-hHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 011743 36 ISMVLYFKNE-MHFDIAGA-SNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDC 113 (478)
Q Consensus 36 ~~l~~yl~~~-lg~~~~~~-~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 113 (478)
|++..|+.+. .|++..|. .-+.-+.+-......++...++|. +|.|.+++++.+...+...++....
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~-l~Ykpviil~~~~~i~t~~lll~~~---------- 92 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDY-LRYKPVIILQALSYIITWLLLLFGT---------- 92 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHC----------
Confidence 6888999987 99999986 466777777788888999999999 8999999888887777766665543
Q ss_pred CCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhc--
Q 011743 114 GKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI-- 191 (478)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~-- 191 (478)
+...+-+.-+..|++.+. ..+..+++=...|+++ -.++.+..+.+.-+|-.++..++=.+..
T Consensus 93 ---------sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~------yq~vts~~raa~l~g~~~s~~lgQllvs~~ 156 (412)
T PF01770_consen 93 ---------SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEH------YQKVTSYTRAATLVGRFISSLLGQLLVSFG 156 (412)
T ss_pred ---------cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 666677777777776555 3445555555555544 4566777777777777777766654443
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhcCc
Q 011743 192 DQGWWLGFLISSVATLIGLIALAIGKP 218 (478)
Q Consensus 192 ~~~~~~~f~i~~~~~~~~~~~~~~~~~ 218 (478)
..++...+++......+++++.++..+
T Consensus 157 ~~sy~~L~~isl~~~~~a~~~~~fLP~ 183 (412)
T PF01770_consen 157 GVSYFQLNYISLASVSLALLIALFLPM 183 (412)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 356888888888777777776665543
No 218
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.50 E-value=2.6e-06 Score=87.26 Aligned_cols=159 Identities=14% Similarity=0.063 Sum_probs=125.5
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
|....+++..++...++......+..|.+..+|-+.......+.....+..++.++...+++| +|+||++.++.++.++
T Consensus 236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~-~gkk~~~~~~~~~~~i 314 (467)
T COG2211 236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKK-FGKKKLFLIGLLLLAV 314 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hchHHHHHHHHHHHHH
Confidence 445555667777777777667777888888899899999889998888888889999999999 9999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChh-hhhhhhhHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPK-GAKALASYFNFYLF 173 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~-~~~~r~~~~~~~~~ 173 (478)
+...+.+.. ..+..+.++..++.++|.+...+...++++|..+-++-+ .+++-|..++.+..
T Consensus 315 ~~~~~~f~~-----------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF 377 (467)
T COG2211 315 GYLLLYFTP-----------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTF 377 (467)
T ss_pred HHHHHHhhc-----------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHH
Confidence 998888765 237888889999999999999999999999998754322 11113556666666
Q ss_pred HHHHHHHHHHHHHHhhhc
Q 011743 174 ATTLAAMIGVTAIVYVFI 191 (478)
Q Consensus 174 ~~~~g~~~~p~i~~~l~~ 191 (478)
..=+|.+++..+.|++..
T Consensus 378 ~~K~g~ala~~~~g~~L~ 395 (467)
T COG2211 378 FRKLGLALAGFIPGWILG 395 (467)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 666777777766666543
No 219
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.48 E-value=1.1e-05 Score=76.68 Aligned_cols=160 Identities=11% Similarity=0.039 Sum_probs=110.3
Q ss_pred HHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 011743 35 GISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCG 114 (478)
Q Consensus 35 ~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (478)
+......+++.+|+|+.|.+.+...-.++..+ .++.|.+.|+ +|.+.++.+|.+...+|..++..+-. ....
T Consensus 21 Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~-~gp~~~l~iG~~~~~~GY~~~~l~~~-~~i~----- 92 (250)
T PF06813_consen 21 FSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDR-FGPWVVLLIGAVLGFVGYGLLWLAVS-GRIP----- 92 (250)
T ss_pred hhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHHHh-CccC-----
Confidence 44555678899999999999999999999886 4889999999 89999999999999999988876542 0000
Q ss_pred CCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccch
Q 011743 115 KSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG 194 (478)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~ 194 (478)
..+.+.+.+..++.+.+.+.+..+......+-||+ + ||++.++.-....+++.+-..+...+.+.-.
T Consensus 93 ------~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~------RG~vvgilk~~~GLSaai~t~i~~~~f~~~~ 159 (250)
T PF06813_consen 93 ------SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-S------RGTVVGILKGFFGLSAAIFTQIYSAFFGDDP 159 (250)
T ss_pred ------ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-c------cCceehhhhHHHHhHHHHHHHHHHHHcCCCh
Confidence 12556667777777777666655555555577874 5 8999998877777766655555544443322
Q ss_pred hHHHHHHHHHHHHHHHHHHHh
Q 011743 195 WWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 195 ~~~~f~i~~~~~~~~~~~~~~ 215 (478)
-...++++....+++++...+
T Consensus 160 ~~fll~la~~~~~v~l~~~~~ 180 (250)
T PF06813_consen 160 SSFLLFLAVLPAVVCLVAMFF 180 (250)
T ss_pred HHHHHHHHHHHHHHHHHHhhh
Confidence 333444444444444444333
No 220
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.47 E-value=1.4e-06 Score=91.33 Aligned_cols=184 Identities=10% Similarity=-0.017 Sum_probs=126.6
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhh----HhHHHHHHHHHHHHHhhHHHH----HhhhccchhHH--HH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAG----ASNTLTNFFGSTFLLCLVGGF----ISDTYLSRFAT--CL 86 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~----~~~~~~~~~~~~~~~~~~~G~----laDr~~Gr~~~--~~ 86 (478)
...+++...+-...|.-..+.++.|..++.+.+... .+++.+...+...+..|+..+ +.||..+.+.. +.
T Consensus 274 ~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~ 353 (475)
T TIGR00924 274 YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFT 353 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHH
Confidence 333444445555666556666777777665544322 567777777777777776554 44431222333 36
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhh
Q 011743 87 VFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALAS 166 (478)
Q Consensus 87 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~ 166 (478)
+|+++.+++...+.+..... .+ ....+.+++++..++.++|.....|...+++.+..|++. |++
T Consensus 354 ~G~~l~~~~~~~~~~~~~~~--~~--------~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~------~g~ 417 (475)
T TIGR00924 354 LGMLFCGASFLTFAASIWFA--DA--------GGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL------MGQ 417 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhc--CC--------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH------HHH
Confidence 78888888877766532100 00 002378889999999999999999999999999999888 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhc
Q 011743 167 YFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 167 ~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
.++++.....+|..+++.+.....+..+|...|...++..++..++.++.
T Consensus 418 ~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (475)
T TIGR00924 418 MLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALM 467 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888877666678777777776665555555444
No 221
>PRK11462 putative transporter; Provisional
Probab=98.47 E-value=2.2e-06 Score=89.54 Aligned_cols=161 Identities=11% Similarity=0.047 Sum_probs=95.8
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHH
Q 011743 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (478)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~ 95 (478)
..+.++...++...+..........|.+..+|. ....+.++..+.+...++.+++++++|| +|+|+++..+..+.++.
T Consensus 229 ~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r-~gkk~~~~~~~~~~~~~ 306 (460)
T PRK11462 229 QWRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDW-KCKVTIFWWTNALLAVI 306 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHH
Confidence 344444444444444333333333333333443 3345667788888899999999999999 89999887665544443
Q ss_pred HHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhh-hhhhhhHHHHHHHH
Q 011743 96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKG-AKALASYFNFYLFA 174 (478)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~-~~~r~~~~~~~~~~ 174 (478)
.++..+.. ..+...+++..++.|++.+...+...++++|..+.++-+- +++-+..++.....
T Consensus 307 ~~~~~~~~-----------------~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~ 369 (460)
T PRK11462 307 SLAMFFVP-----------------MQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFV 369 (460)
T ss_pred HHHHHHhc-----------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHH
Confidence 33332221 1123334445566777777777777788888877432111 11124445666677
Q ss_pred HHHHHHHHHHHHHhhhccchh
Q 011743 175 TTLAAMIGVTAIVYVFIDQGW 195 (478)
Q Consensus 175 ~~~g~~~~p~i~~~l~~~~~~ 195 (478)
..+|..+++.++|++.+..||
T Consensus 370 ~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 370 LKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHcCC
Confidence 889999998888876543333
No 222
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.46 E-value=2.4e-06 Score=86.56 Aligned_cols=176 Identities=12% Similarity=0.036 Sum_probs=137.0
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccC---CchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMH---FDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL 91 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg---~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 91 (478)
|..|.+.+........|+..-.-.+.|....++ .++...|.+.+...+.-.+.-.+..++.+| +|.|+.++++.++
T Consensus 220 ~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~r-ig~k~~Lllag~i 298 (412)
T PF01306_consen 220 RNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINR-IGAKNLLLLAGVI 298 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHh-cChHhHHHHHHHH
Confidence 557766666555555555544456777765443 455667888888888999999999999999 9999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHH
Q 011743 92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (478)
Q Consensus 92 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~ 171 (478)
.++=...++++. +++.+.+...+.++-.+..-.+..-++++.+|++- ..+.+.+.
T Consensus 299 ~~iRi~~~~~~~-------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl------sAt~y~v~ 353 (412)
T PF01306_consen 299 MAIRIIGSGFAT-------------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL------SATLYLVG 353 (412)
T ss_dssp HHHHHHHHHT---------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG------HHHHHHHH
T ss_pred HHHHHHHHhhhc-------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH------HHHHHHHH
Confidence 888877777765 78889999999999999999999999999999765 66777775
Q ss_pred H-HHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhc
Q 011743 172 L-FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 172 ~-~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
. .+..+|..+.+.++|.+-++.|++..|++.+.+.+...++..+.
T Consensus 354 ~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~ 399 (412)
T PF01306_consen 354 FQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFT 399 (412)
T ss_dssp HTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheee
Confidence 4 67789999999999999999999999988777665555554444
No 223
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.41 E-value=1.9e-06 Score=80.63 Aligned_cols=93 Identities=15% Similarity=0.161 Sum_probs=70.7
Q ss_pred HHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccc
Q 011743 40 LYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCL 119 (478)
Q Consensus 40 ~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (478)
.|+.++.|+...++|.+..+.....+++..+.|.++|| .|||+..+.-++.+. +..+.-+
T Consensus 61 YyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDk-qGRKracvtycitYi----LsCiTKh--------------- 120 (454)
T KOG4332|consen 61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCITYI----LSCITKH--------------- 120 (454)
T ss_pred eeeehhcCccCCccceeeecccchHHHHHHHHHHHHhh-hccccceeeehHHHH----HHHHhhc---------------
Confidence 46777899999999999988889999999999999999 899997665554444 4444432
Q ss_pred cchhHHHHHHHHHHHHhccccccccccc-cccCCC
Q 011743 120 KGAIAAYFYGSLYLYSLGCGGNRGTLPA-LGAGQF 153 (478)
Q Consensus 120 ~~~~~~~~~~~~~l~gig~g~~~~~~~~-~i~~~~ 153 (478)
+...-.++++|.+.|+..+...++.-+ +++|.-
T Consensus 121 -SpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 121 -SPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHN 154 (454)
T ss_pred -CCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 125566889999999999988777654 345544
No 224
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.34 E-value=1.2e-05 Score=77.13 Aligned_cols=146 Identities=19% Similarity=0.197 Sum_probs=108.9
Q ss_pred HHHHHHcccccCCch--hhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 011743 36 ISMVLYFKNEMHFDI--AGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDC 113 (478)
Q Consensus 36 ~~l~~yl~~~lg~~~--~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 113 (478)
...+.+.. +.+.+. ...++....+.+...++.++.|.++|| +|||+.+..+.....++.++......
T Consensus 23 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~--------- 91 (338)
T COG0477 23 PALPLLLS-TLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDR-YGRRKVLIIGLLLFLLGTLLLALAPN--------- 91 (338)
T ss_pred HHHHHHHH-HcCCCchhHHHHHHHHHHHHHHHHHhhhhhhcccc-ccchHHHHHHHHHHHHHHHHHHhCcc---------
Confidence 34444433 444444 578999999999999999999999999 79998888888765555444444420
Q ss_pred CCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCC-CChhhhhhhhhHHHHHHH-HHHHHHHHHHHHHHhhhc
Q 011743 114 GKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDE-NDPKGAKALASYFNFYLF-ATTLAAMIGVTAIVYVFI 191 (478)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~-~~~~~~~~r~~~~~~~~~-~~~~g~~~~p~i~~~l~~ 191 (478)
.....+++.|...|++.+...+...+++.|.+|+ ++ |+...+.... ...+|..++|.+++.+..
T Consensus 92 --------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 92 --------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATE------RGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred --------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1477888899999999999999999999999987 33 7788888777 577888888877776654
Q ss_pred c--chhHHHHHHHHHHH
Q 011743 192 D--QGWWLGFLISSVAT 206 (478)
Q Consensus 192 ~--~~~~~~f~i~~~~~ 206 (478)
. .+|+..|.+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 158 ALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHhcchHHHHHHHHHHH
Confidence 3 47888666554443
No 225
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.29 E-value=2.2e-05 Score=80.92 Aligned_cols=170 Identities=12% Similarity=0.062 Sum_probs=110.0
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i 94 (478)
|.++..++...+....++....+.|.|+++.+|++..+.++.......+..++..+.+.+.++ .+++|.+.....+..+
T Consensus 218 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~-~~~~~~~~~~~~~~~i 296 (413)
T PRK15403 218 RLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKD-PTEPRFIWRAVPIQLV 296 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchhHHHHHHHHHHH
Confidence 446656666666777777777788999999999999999999887888888877777776655 3444554444444444
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (478)
+..++...... . ..+....+++.++.++|.+...|+..+..- .+.+++ ++++.+.....
T Consensus 297 g~~l~~~~~~~---~-----------~~~~~~~~~~~~l~~~G~~~~~p~~~~~al--~~~~~~-----~G~a~a~~~~~ 355 (413)
T PRK15403 297 GLALLIVGNLL---W-----------PHVWLWSVLGTSLYAFGIGLIFPTLFRFTL--FSNNLP-----KGTVSASLNMV 355 (413)
T ss_pred HHHHHHHHHHH---c-----------cccHHHHHHHHHHHHHHHHHHhHHHHHHHh--ccCCCC-----CcHHHHHHHHH
Confidence 44444332100 0 113334567888889999998888875332 222222 56777777777
Q ss_pred HHHHHHHHHHHHHhhhccchhHHHHHHHHHHHH
Q 011743 175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVATL 207 (478)
Q Consensus 175 ~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~ 207 (478)
...+...++.+.+++.+. +-.++|....++..
T Consensus 356 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~ 387 (413)
T PRK15403 356 ILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAG 387 (413)
T ss_pred HHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHH
Confidence 777777788888887554 55666665544433
No 226
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.27 E-value=3.9e-05 Score=76.79 Aligned_cols=173 Identities=17% Similarity=0.171 Sum_probs=139.1
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 011743 20 VFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVML 99 (478)
Q Consensus 20 l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~ 99 (478)
.+...++..+++++==..+=+|--+.+|++..+.+.++.....+..++-.+.|++..|..+++++-.+++...++++.+.
T Consensus 213 f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~li 292 (403)
T PF03209_consen 213 FFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALI 292 (403)
T ss_pred HHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHH
Confidence 44444555555554445666788888999999999999999999999999999998865899999999999999998887
Q ss_pred HHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHH
Q 011743 100 TIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAA 179 (478)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 179 (478)
..+.. ..+.+.+..+.+++|+|.|.+.....+.+.|+.++++ .+..++.+..+..++.
T Consensus 293 i~a~~----------------~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~------aG~~mG~WGaaQA~A~ 350 (403)
T PF03209_consen 293 ILAGP----------------LGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR------AGLFMGAWGAAQAIAR 350 (403)
T ss_pred HHHHh----------------cccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc------hhHHHHHHHHHHHHHH
Confidence 77753 2367889999999999999999999999999998887 7899999988888888
Q ss_pred HHHHHHHHhhhc----------cchhHHHHHHHHHHHHHHHHHHH
Q 011743 180 MIGVTAIVYVFI----------DQGWWLGFLISSVATLIGLIALA 214 (478)
Q Consensus 180 ~~~p~i~~~l~~----------~~~~~~~f~i~~~~~~~~~~~~~ 214 (478)
.++-.++|.+.| ..+|...|.+-++.+++++.+..
T Consensus 351 Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 351 GLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred HHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 888888876643 23577777777776666655543
No 227
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.27 E-value=0.00035 Score=71.82 Aligned_cols=103 Identities=12% Similarity=0.046 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHh
Q 011743 57 LTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSL 136 (478)
Q Consensus 57 ~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gi 136 (478)
+.+-.....+..++++.+.|+ +|.|..+.++...++.-..-+... |...++.+-.+.|+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~-i~~K~~lv~ga~~y~~f~~gfl~~--------------------N~y~~yfssallG~ 114 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNF-LGPKWALVIGATCYAAFPLGFLFP--------------------NSYYLYFSSALLGF 114 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHH-hhHHHHHHHHhHHHHHHHHHHHhc--------------------chHHHHHHHHHhhh
Confidence 555556677788899999999 999999999988776643333221 66778899999999
Q ss_pred ccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 011743 137 GCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAI 186 (478)
Q Consensus 137 g~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~ 186 (478)
|.+..+.....++++..++++ +++..++.-...+.+..+|..+.
T Consensus 115 Gaallw~GqG~ylt~~st~~t------ie~Nisi~Wai~~~~li~Ggi~l 158 (461)
T KOG3098|consen 115 GAALLWTGQGGYLTSNSTRET------IERNISIFWAIGQSSLIIGGIIL 158 (461)
T ss_pred hHHheecccceehhhcCChhh------HHHHHHHHHHHHHHHHHhhhHhh
Confidence 999999999999999988777 77777776666666666654433
No 228
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.24 E-value=1.3e-06 Score=86.29 Aligned_cols=180 Identities=15% Similarity=-0.005 Sum_probs=133.4
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccc--hhHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLS--RFATCLVFGTLEVL 94 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G--r~~~~~~~~~~~~i 94 (478)
++...+.--..+.+.-..=+.+++++.+++..+..+.|....-..+...++..+.|.++|| ++ |-..-..++++...
T Consensus 272 I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k-~~~~~wl~~~~gl~~~G~ 350 (464)
T KOG3764|consen 272 ILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADK-YPHLRWLLSLGGLATVGV 350 (464)
T ss_pred HhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHh-cCchhHHHHHHHHHHHHH
Confidence 3334444444444444466888899999999677799999888999999999999999999 79 54444445555554
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHH
Q 011743 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (478)
.+...++++ +...+++-+...+++.+...++..+......+.++.++-.--+..+++...+
T Consensus 351 ~~~~iP~~~-------------------~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a 411 (464)
T KOG3764|consen 351 SSGPIPFAT-------------------SIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAA 411 (464)
T ss_pred HhchhHhhh-------------------hHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHH
Confidence 444444443 6777888888899999998888888888888876533222246778888888
Q ss_pred HHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhc
Q 011743 175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 175 ~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
..+|..+||.++|.+.+..|++|.-.+.+...++-..++.+.
T Consensus 412 ~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 412 FSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLL 453 (464)
T ss_pred HHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999998777777766555444443
No 229
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.24 E-value=8.5e-06 Score=62.61 Aligned_cols=68 Identities=13% Similarity=0.017 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHH
Q 011743 23 LSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE 92 (478)
Q Consensus 23 ~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 92 (478)
..++...+.-.+.++++.|++ +.|+|+.++|.+.++..+...+++|+.|+++|| +||+|.++....++
T Consensus 8 ~yf~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk-~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 8 FYFFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADK-FGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCccHHHHHHHHHH
Confidence 344445555567899999998 599999999999999999999999999999999 89988887766543
No 230
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.21 E-value=1.8e-05 Score=83.71 Aligned_cols=175 Identities=15% Similarity=-0.006 Sum_probs=116.2
Q ss_pred HHHHHHHHHHhHHHHHHHccc--ccCCch------hhHhHHHHHHHHHHHHHhhHH----HHHhhhccchhHHHHHHHHH
Q 011743 24 SALENMGFIANGISMVLYFKN--EMHFDI------AGASNTLTNFFGSTFLLCLVG----GFISDTYLSRFATCLVFGTL 91 (478)
Q Consensus 24 ~~~~~~~~~~v~~~l~~yl~~--~lg~~~------~~~~~~~~~~~~~~~~~~~~~----G~laDr~~Gr~~~~~~~~~~ 91 (478)
.++....+|.+..-++.++.. ..+.+. ...+++.++..+...++.++. +++.|| .+..+.+.+|+++
T Consensus 281 ~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r-~~~~~~~~~G~~l 359 (500)
T PRK09584 281 LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDR-LPMPHKFAIGMVL 359 (500)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcC-CCcHHHHHHHHHH
Confidence 445566677777666666442 111111 124555566666666666666 555666 5667889999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHH
Q 011743 92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (478)
Q Consensus 92 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~ 171 (478)
.+++...+...... .++.| ..+.+++.+..+++++|.....|...+++.+..|++. |++.++.+
T Consensus 360 ~~l~f~~l~~~~~~----~~~~~------~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~------rg~~~g~~ 423 (500)
T PRK09584 360 CSGAFLVLPLGAKF----ANDAG------IVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRL------MGFIMGSW 423 (500)
T ss_pred HHHHHHHHHHHHHh----cCCCC------ccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHH------HHHHHHHH
Confidence 99999887766421 01111 1245678899999999999999999999999999888 99999988
Q ss_pred HHHHHHHHHHHHHHHHhhh----------ccchhHHHHHHHHHHHHHHHHHHHh
Q 011743 172 LFATTLAAMIGVTAIVYVF----------IDQGWWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 172 ~~~~~~g~~~~p~i~~~l~----------~~~~~~~~f~i~~~~~~~~~~~~~~ 215 (478)
+....+|..++..+.+... ...+++..|...++..++..++++.
T Consensus 424 ~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 424 FLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 8777777777666554221 0123677777766665544444443
No 231
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.21 E-value=2.3e-05 Score=77.95 Aligned_cols=166 Identities=15% Similarity=0.081 Sum_probs=121.8
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~ 96 (478)
.+.-.+..++=-..--.+..+++.|+.+..|++..++...++.+..+.+++..++-++-.| +-..|.+.+..+...+-.
T Consensus 238 ~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~-~~~~k~Laf~a~~~ill~ 316 (422)
T COG0738 238 LRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSR-IKPEKYLAFYALIAILLL 316 (422)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHH
Confidence 3333444444434444566899999999999999999999999999999999999999889 899998887776655554
Q ss_pred HHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 011743 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (478)
+...+.+ +.. -+.+.++.|+..+.++|++.+...+..|+++ +.-+..-.+..
T Consensus 317 ~~~~l~~-------------------g~v-~~~~l~~ig~F~simfPTIfslal~~l~~~t--------s~~s~~l~mai 368 (422)
T COG0738 317 LAVALIG-------------------GVV-ALYALFLIGLFNSIMFPTIFSLALKNLGEHT--------SVGSGLLVMAI 368 (422)
T ss_pred HHHHHhc-------------------ChH-HHHHHHHHHHHhHHHHHHHHHHHHhccCccc--------cccceeeeehe
Confidence 4444443 322 3345678899999999999999999999544 22233333456
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHH
Q 011743 177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLI 211 (478)
Q Consensus 177 ~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~ 211 (478)
+|+++-|.+.|++.|..+-...+.+....+.+.++
T Consensus 369 vGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV~ 403 (422)
T COG0738 369 VGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYVL 403 (422)
T ss_pred ecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 89999999999999999988887744444444443
No 232
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.19 E-value=5.9e-06 Score=86.55 Aligned_cols=137 Identities=12% Similarity=-0.136 Sum_probs=109.3
Q ss_pred cccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccc
Q 011743 42 FKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKG 121 (478)
Q Consensus 42 l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (478)
..+.+|+++.+.|.+.....++..++..+.+++.+| ++.|+++.++.++.+++.........-.. -..|.+
T Consensus 279 ~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~-~~~r~~l~~~~~l~~~~~~~~~~l~~~~~---~~~gi~----- 349 (468)
T TIGR00788 279 TTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKT-FPYRLLFGVTTLLYTLSSLFDLILVKRWN---LAFGIS----- 349 (468)
T ss_pred EcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHHHHHHhCceeeeeccc---cccCCC-----
Confidence 346799999999999999999999999999999999 89999999999998887755432110000 001111
Q ss_pred hhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccch
Q 011743 122 AIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG 194 (478)
Q Consensus 122 ~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~ 194 (478)
+...+....++.+++.+........++.+..|++. +++.++++....++|..+++.+++.+.+..|
T Consensus 350 -~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~------egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 350 -DEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC------ESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred -CeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc------eehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 23344555677888888888888999999999988 8999999999999999999999999987766
No 233
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.19 E-value=3.1e-05 Score=80.66 Aligned_cols=204 Identities=10% Similarity=-0.065 Sum_probs=141.2
Q ss_pred ccCCcchhHHHHHHHHHHHHHHHHhHHHHHHHccc-ccCCchh------h----HhHHHHHHHHHHHHHhhHHHHHhhhc
Q 011743 10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKN-EMHFDIA------G----ASNTLTNFFGSTFLLCLVGGFISDTY 78 (478)
Q Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~-~lg~~~~------~----~~~~~~~~~~~~~~~~~~~G~laDr~ 78 (478)
.|+.||.++.+++++++.-++++....+.+.|+.+ .+|-++. + ..+....+.+.+.+..++--++.+|
T Consensus 253 ~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~- 331 (477)
T TIGR01301 253 FKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRG- 331 (477)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 35689999999999999999999999999998875 3443221 1 2345556666666777788889999
Q ss_pred cch-hHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCC-cc-ccchhHHHHHHHHHHHHhccccccccccccccCCCCC
Q 011743 79 LSR-FATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKS-SC-LKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDE 155 (478)
Q Consensus 79 ~Gr-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~ 155 (478)
+|+ |++..++.++.+++.....+....+.-....-|+. .. +.....+..++...+.|+..+.....-.+++++..++
T Consensus 332 ~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~ 411 (477)
T TIGR01301 332 WGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSN 411 (477)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccc
Confidence 885 67768888888888777664431100000000000 00 0011246666777889999999999999999999985
Q ss_pred CChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccch--hHHHHHHHHHHHHHHHHHHHhcCc
Q 011743 156 NDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG--WWLGFLISSVATLIGLIALAIGKP 218 (478)
Q Consensus 156 ~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~--~~~~f~i~~~~~~~~~~~~~~~~~ 218 (478)
++.+ .|..+|+.+.++.+...+.....|.+.+..| -.+.+.+.++.++++.+..++..|
T Consensus 412 ~~~~----~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~ 472 (477)
T TIGR01301 412 LGAG----QGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLP 472 (477)
T ss_pred cCCC----CcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCC
Confidence 4411 6899999999999888888877777554433 566888888888888777666544
No 234
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.13 E-value=1.9e-05 Score=83.13 Aligned_cols=176 Identities=11% Similarity=-0.009 Sum_probs=114.2
Q ss_pred HHHHHHHHHHhHHHHHHHcccccCCchh----hHhHHHHHHHHHHHHHhhHHHHHhhhccchhH-------HHHHHHHHH
Q 011743 24 SALENMGFIANGISMVLYFKNEMHFDIA----GASNTLTNFFGSTFLLCLVGGFISDTYLSRFA-------TCLVFGTLE 92 (478)
Q Consensus 24 ~~~~~~~~~~v~~~l~~yl~~~lg~~~~----~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~-------~~~~~~~~~ 92 (478)
..+....+......++.|.++..+.+.. ...++.+...+...+..|+.|++.|| +|+|+ -+.+|+++.
T Consensus 278 ~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~r-l~~r~~~~~~~~k~~~G~~l~ 356 (489)
T PRK10207 278 AVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTH-LGSKGKDLSMPMKFTLGMFLC 356 (489)
T ss_pred HHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHH-HhhCCCCCCcHHHHHHHHHHH
Confidence 3334444454546666776643322111 12344445556677788889999999 89987 377788887
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHH
Q 011743 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (478)
Q Consensus 93 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~ 172 (478)
+++.+.+..... ...+ ..+ ..+.++++...++.|+|.+...|...+++.+..|++. ++.+++.+.
T Consensus 357 ~~~~~~~~~~~~--~~~~-~~~------~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~------~g~~~g~~~ 421 (489)
T PRK10207 357 SLGFLTAAAAGM--WFAD-AQG------LTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHL------MGFILGMWF 421 (489)
T ss_pred HHHHHHHHHHHH--hhcC-CCC------ccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHH------HHHHHHHHH
Confidence 777655432210 0000 001 1256777788999999999999999999999999887 899999999
Q ss_pred HHHHHHHHHHHHHHHhhhc---------cc-hhHHHHHHHHHHHHHHHHHHHh
Q 011743 173 FATTLAAMIGVTAIVYVFI---------DQ-GWWLGFLISSVATLIGLIALAI 215 (478)
Q Consensus 173 ~~~~~g~~~~p~i~~~l~~---------~~-~~~~~f~i~~~~~~~~~~~~~~ 215 (478)
...++|..+|..++..... .. .+.+.|...++..++..++++.
T Consensus 422 l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~ 474 (489)
T PRK10207 422 LTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMAL 474 (489)
T ss_pred HHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988877765521 01 2455565555555444444444
No 235
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.06 E-value=0.0092 Score=61.38 Aligned_cols=192 Identities=11% Similarity=-0.079 Sum_probs=94.3
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~ 96 (478)
.+.+...-++.+.+.=+--.-.+.|+.+-+.=+..-.+..-.+-.+...++.+..|...|| .-|.|++..+.+..-++.
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~-~~Rl~~~~~~l~~Qn~sv 82 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDR-SPRLKVIRTSLVVQNLSV 82 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhC-CcchhhHHHHHHHHHHHH
Confidence 3444444444333333222333444443332233344455555667788888999999999 799999998887755544
Q ss_pred HHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 011743 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (478)
.+....-..-...+.....+ +......+.+...+..+..=.......+.=-||...=..+++..+.+..+..+=.=-
T Consensus 83 ~~s~~~~~~l~~~~~~~~~~---~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL 159 (432)
T PF06963_consen 83 AASCALFLLLLSYPSSSSQS---SWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDL 159 (432)
T ss_pred HHHHHHHHHHHhCCcccccc---chHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHH
Confidence 33322110000000000000 001112222222222222111222223333444332111111124444444444445
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 011743 177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA 212 (478)
Q Consensus 177 ~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~ 212 (478)
+--.++|.+.|.+.+..+......+.++..++...+
T Consensus 160 ~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 160 FCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFV 195 (432)
T ss_pred HHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHH
Confidence 677889999999988788888777777776666654
No 236
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.05 E-value=1.4e-05 Score=81.93 Aligned_cols=172 Identities=9% Similarity=-0.066 Sum_probs=136.9
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 011743 20 VFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVML 99 (478)
Q Consensus 20 l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~ 99 (478)
+++...+..++.--++.++--+++ +++-.+..-|.....-..+-.++.++.+++-.| +|+-+++..+++.+++=++..
T Consensus 376 ff~~av~mG~g~~lv~tFLfWHle-d~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~k-iGHv~v~~lgLa~~~~Rf~~~ 453 (618)
T KOG3762|consen 376 FFFVAVVMGAGVGLVFTFLFWHLE-DLGGIKTLFGVVSALCHAGEILFYFFSFKLIEK-IGHVNVMYLGLACNVGRFLYY 453 (618)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHh-hcCCcceeeeehhhhhccchHHHHHHHHHHHHH-hcccceeeehhhHHHHHHHHH
Confidence 344444555555555566655554 556566666666666667777888899999999 899999999999999887777
Q ss_pred HHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHH-HHHH
Q 011743 100 TIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA-TTLA 178 (478)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g 178 (478)
.... |+|+.+..-+++|+..+.++.++.+++++..|++. |.++.++.... -.+|
T Consensus 454 S~L~-------------------n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l------~at~Q~l~~g~f~GlG 508 (618)
T KOG3762|consen 454 SYLQ-------------------NPWMVLPIEILQGITHALIWAAIISYASHVAPPGL------RATAQGLLQGIFHGLG 508 (618)
T ss_pred HHhc-------------------CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc------hHHHHHHHHHHhcccC
Confidence 7665 78888899999999999999999999999999988 88898887754 4689
Q ss_pred HHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhcCc
Q 011743 179 AMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKP 218 (478)
Q Consensus 179 ~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~~~ 218 (478)
-.+|.+++|.+.+.+|=+..|.+.++.+++.++.+....+
T Consensus 509 ~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~ 548 (618)
T KOG3762|consen 509 KGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQL 548 (618)
T ss_pred cchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999899999988888777766655443
No 237
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.96 E-value=0.00022 Score=75.76 Aligned_cols=150 Identities=13% Similarity=0.018 Sum_probs=108.4
Q ss_pred cchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchh---hHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHH-HHH
Q 011743 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIA---GASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCL-VFG 89 (478)
Q Consensus 14 ~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~-~~~ 89 (478)
+|.....++..++..+.||++..+.|......++-++. +.++....+.++..++.++.|++..+ ++|-|-.+ ++.
T Consensus 309 ~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~-ir~~Kw~li~~~ 387 (599)
T PF06609_consen 309 RRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSK-IRHIKWQLIFGS 387 (599)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHH-ccchhHHHHHHH
Confidence 57788788888999999999888888877776766553 56788888888888999999999988 78877664 566
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHH
Q 011743 90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (478)
Q Consensus 90 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~ 169 (478)
++++++..++.... .++....+...++.|+|.|...........-..|+++ .+.+.+
T Consensus 388 ~~~ta~~Gama~~~-----------------~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~------ig~a~g 444 (599)
T PF06609_consen 388 VLMTAFCGAMAAVR-----------------PDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDED------IGTATG 444 (599)
T ss_pred HHHHHHHHHHHHcc-----------------CCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchH------HHHHHH
Confidence 66666555555432 1233334556678888888877666665555666555 888888
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 011743 170 FYLFATTLAAMIGVTAIV 187 (478)
Q Consensus 170 ~~~~~~~~g~~~~p~i~~ 187 (478)
+......+|+.+|..+-.
T Consensus 445 L~~s~R~~GGsIg~aIy~ 462 (599)
T PF06609_consen 445 LTGSIRSIGGSIGYAIYN 462 (599)
T ss_pred HHHHHHHHhhHHHHHHHH
Confidence 888778888877776543
No 238
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.83 E-value=0.0001 Score=77.04 Aligned_cols=167 Identities=15% Similarity=0.092 Sum_probs=105.5
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhc---cchhHHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY---LSRFATCLVFGTL 91 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Gr~~~~~~~~~~ 91 (478)
..+|...+..++.....|+...++|.|+++..|++..+++.+...+.++..++.+++|+++||. ..+|......+.+
T Consensus 273 p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~ 352 (495)
T KOG2533|consen 273 PGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCL 352 (495)
T ss_pred hhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3488889999999999999999999999997789999999999999999999999999999992 2444444444444
Q ss_pred HH-HHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHH
Q 011743 92 EV-LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF 170 (478)
Q Consensus 92 ~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~ 170 (478)
.. +|.+.+.... .......+.+....+.+...++......+-..++.. +-+..+.
T Consensus 353 ~~~~g~~~l~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k-----~~~~~~~ 408 (495)
T KOG2533|consen 353 YAIIGAISLLAAA-------------------VLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTK-----ALTTVSA 408 (495)
T ss_pred HHHHHHHHHHhhc-------------------cchHHhHHHHhcchhhHHHHHHHHhhccccccchHH-----hHHHHhh
Confidence 33 3333333222 122222222233333333444445555555544431 4445555
Q ss_pred HHHHHHH-HHHHHHHHHHhhhccchhHHHHHHHHHH
Q 011743 171 YLFATTL-AAMIGVTAIVYVFIDQGWWLGFLISSVA 205 (478)
Q Consensus 171 ~~~~~~~-g~~~~p~i~~~l~~~~~~~~~f~i~~~~ 205 (478)
+..+.+. |.+.+++..+.....+.|...|......
T Consensus 409 ~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~~~ 444 (495)
T KOG2533|consen 409 IIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLVAA 444 (495)
T ss_pred hhcchhHHHHhhhhhcccccCcchhhhhHHHHHHHH
Confidence 4444444 4444444445555556788888554443
No 239
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.81 E-value=0.0012 Score=68.14 Aligned_cols=70 Identities=14% Similarity=0.192 Sum_probs=59.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHH
Q 011743 388 TQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLH 467 (478)
Q Consensus 388 ~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g 467 (478)
+..+.+.+|+.+..+=++....+ .+.|.+.+.-+++|+...++..+.-+++...+|+++|.++++
T Consensus 434 GHv~v~~lgLa~~~~Rf~~~S~L---------------~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~ 498 (618)
T KOG3762|consen 434 GHVNVMYLGLACNVGRFLYYSYL---------------QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQG 498 (618)
T ss_pred cccceeeehhhHHHHHHHHHHHh---------------cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHH
Confidence 55566788888877777777777 477888899999999999999999999999999999999999
Q ss_pred HHHHH
Q 011743 468 LHFCH 472 (478)
Q Consensus 468 ~~~~~ 472 (478)
+....
T Consensus 499 l~~g~ 503 (618)
T KOG3762|consen 499 LLQGI 503 (618)
T ss_pred HHHHH
Confidence 87643
No 240
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.79 E-value=1.7e-07 Score=97.35 Aligned_cols=181 Identities=16% Similarity=0.018 Sum_probs=110.5
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHH
Q 011743 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (478)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~ 95 (478)
.....+....+..+..+....+...++.+..+.+.. -.......+...++.+++.++.|| +|||++++.+..+.++.
T Consensus 253 ~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~GRr~~~i~~~~~~~~~ 329 (451)
T PF00083_consen 253 RLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDR-FGRRKLLIIGLLLMAIC 329 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccc-ccccccccccccccccc
Confidence 344444444455444443444444555666777776 233334446666777888899999 89999999999888877
Q ss_pred HHHHH-HHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccc-cccccccccccCCCCCCChhhhhhhhhHHHHHHH
Q 011743 96 LVMLT-IQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCG-GNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (478)
Q Consensus 96 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g-~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~ 173 (478)
.+.+. .... . .++ ++..+.. .++...+...+.+ +..+....+.+|.+|.+. |.++.++.+.
T Consensus 330 ~~~~~~~~~~--~-------~~~-~~~~~~~-~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~------R~~~~~~~~~ 392 (451)
T PF00083_consen 330 SLILGIIFFL--G-------VSS-SSWWSIL-SIVFLALFFAFFSLGWGPLPWIYTAELFPTKV------RSTGIGLSYA 392 (451)
T ss_pred cccccccccc--c-------ccc-ccccccc-cceeeeeccccccccccccccccccccccccc------cccccccccc
Confidence 76664 1110 0 000 0000111 1222222222223 345666688899999998 9999999999
Q ss_pred HHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhc
Q 011743 174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 174 ~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
...+++.++|.+...+.+..+-...|.+.++++++..+..++.
T Consensus 393 ~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~ 435 (451)
T PF00083_consen 393 VGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFF 435 (451)
T ss_pred cccccccccccccccccccccccccchhhHHHHHHHHhheeEE
Confidence 9999999888888777766553455555555555555544443
No 241
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.71 E-value=0.00077 Score=71.52 Aligned_cols=152 Identities=13% Similarity=-0.052 Sum_probs=86.8
Q ss_pred CcchhHHHHHHHHHHHH-HHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHH
Q 011743 13 GFRACTFVFVLSALENM-GFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL 91 (478)
Q Consensus 13 ~~~~~~~l~~~~~~~~~-~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~ 91 (478)
.+|.....+....+.++ ++..+..+.+..+ +..|.+... .....+..+...++..++.++.|| +|||+.++.+.+.
T Consensus 292 ~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if-~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~-~gRr~lll~s~~~ 368 (513)
T KOG0254|consen 292 VRKRLIIGLLLQLFQQLTGINYVFYYSTTIF-KSAGLKSDT-FLASIILGVVNFLGTLVATYLVDR-FGRRKLLLFGAAG 368 (513)
T ss_pred hHHHHHHHHHHHHHHHHhCCceEEeehHHHH-HhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHhHHH
Confidence 44444444444444444 4444445555554 445555433 555566667777788888999999 8999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHH
Q 011743 92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (478)
Q Consensus 92 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~ 171 (478)
+.++.++++........... ..+......+....+.......+..|....+.+|.+|.+- |+++.++.
T Consensus 369 m~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~------r~~~~s~~ 436 (513)
T KOG0254|consen 369 MSICLVILAVVGVFALYYPN------SSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRL------RSKGASLA 436 (513)
T ss_pred HHHHHHHHHHHHHHhccCCC------cccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhH------HhhhHHHH
Confidence 99999888765421110000 0000111222222222222223334555567899999877 77777776
Q ss_pred HHHHHHHH
Q 011743 172 LFATTLAA 179 (478)
Q Consensus 172 ~~~~~~g~ 179 (478)
.....+..
T Consensus 437 ~~~n~~~~ 444 (513)
T KOG0254|consen 437 VAVNWLWN 444 (513)
T ss_pred HHHHHHHH
Confidence 55544333
No 242
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.69 E-value=0.024 Score=57.50 Aligned_cols=51 Identities=16% Similarity=0.090 Sum_probs=45.2
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHhhcc
Q 011743 426 ISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 476 (478)
Q Consensus 426 ~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~~lg 476 (478)
.+.|.+....+..|+-.+.........+.+..|+++|-..||......++|
T Consensus 333 psi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~G 383 (402)
T PF02487_consen 333 PSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLG 383 (402)
T ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHH
Confidence 467777778888899999999999999999999999999999999888776
No 243
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.65 E-value=0.00022 Score=72.15 Aligned_cols=136 Identities=10% Similarity=0.182 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHHhHhhcchhhhhhhcccCCCCCCcccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhH
Q 011743 312 MMPILASTIIMNTCLAQLQTLSVTQGAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQ 391 (478)
Q Consensus 312 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~ 391 (478)
...+++...+-++=...+...+.....+.+.+ ....+.++..-.+...+..|+.+++-+ |. ++..
T Consensus 35 l~il~~vnlmny~Dr~~iagv~~~v~~~fni~----~s~~Gll~~vf~v~~~i~sPl~gyLad----ry-------NR~~ 99 (493)
T KOG1330|consen 35 LVILCLVNLMNYADRYTIAGVLKEVQTYFNIS----DSELGLLQTVFIVVFMIASPLFGYLAD----RY-------NRKR 99 (493)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCC----chhccchhHHHHHHHHHHHHHHHHHHh----hc-------Ccce
Confidence 34455555555555555555544433333333 334567777777888899999998543 42 6667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHH
Q 011743 392 RVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFC 471 (478)
Q Consensus 392 ~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~ 471 (478)
.+.+|..+-.++.+..++.+ .+|.+.+.-.+.|+||....|...+++++..|.+.|+++++++++
T Consensus 100 v~~vG~~iW~~Av~~~~fs~---------------~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~ 164 (493)
T KOG1330|consen 100 VIAVGIFIWTLAVFASGFSN---------------HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYF 164 (493)
T ss_pred EEeeHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhh
Confidence 78999999888888888873 468888899999999999999999999999999999999999999
Q ss_pred HhhccC
Q 011743 472 HCHLAT 477 (478)
Q Consensus 472 ~~~lg~ 477 (478)
...+|.
T Consensus 165 ~ipvGs 170 (493)
T KOG1330|consen 165 AIPVGS 170 (493)
T ss_pred hccccc
Confidence 988875
No 244
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.61 E-value=0.046 Score=56.95 Aligned_cols=161 Identities=12% Similarity=0.035 Sum_probs=95.8
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCc-----hhhHhHHHHHHHHHHHHH-hhHHHHHhhhccchhHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFD-----IAGASNTLTNFFGSTFLL-CLVGGFISDTYLSRFATCLVF 88 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~-----~~~~~~~~~~~~~~~~~~-~~~~G~laDr~~Gr~~~~~~~ 88 (478)
|.+..+.+..++-.+.|+.+. -+++.+.++ .+...++-....+...+. .++-+++++| ++|+|.+.+.
T Consensus 7 ~k~~~~~l~fF~il~~Y~iLR-----~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~-~~~~~lf~~~ 80 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTILR-----DTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNI-LSKEALFYTV 80 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----hhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHHHhHHHH
Confidence 345556666667767766443 246666663 345566666555555555 7889999999 8999999887
Q ss_pred HHHHHHHHHHHHHHh--hcccCCCCCCCC--C-cccc----------chhHHHHHHHHHHHHhccccccc-cccccccCC
Q 011743 89 GTLEVLSLVMLTIQA--YSKSLHPPDCGK--S-SCLK----------GAIAAYFYGSLYLYSLGCGGNRG-TLPALGAGQ 152 (478)
Q Consensus 89 ~~~~~i~~~~~~~~~--~~~~~~~~~~~~--~-~~~~----------~~~~~~~~~~~~l~gig~g~~~~-~~~~~i~~~ 152 (478)
...+..-..+++..- ..+.++|..+-. - ..+- .+....+++..-+.+ ....+ ...++..|.
T Consensus 81 ~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~---~~vvS~lFW~fandi 157 (472)
T TIGR00769 81 ISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWG---SVVLSLLFWGFANQI 157 (472)
T ss_pred HHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHH---HHHHHHHHHHHHHhc
Confidence 776666555554331 112222211100 0 0000 001112222222221 12222 456788899
Q ss_pred CCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 011743 153 FDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF 190 (478)
Q Consensus 153 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~ 190 (478)
++.++ -.|.+++...+.|+|..+++.+..++.
T Consensus 158 ~t~~q------akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 158 TTIDE------AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred CCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98776 678999999999999999999888876
No 245
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.55 E-value=0.0012 Score=71.94 Aligned_cols=170 Identities=15% Similarity=0.121 Sum_probs=120.2
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHH-HHHHHhhHHHHHhhhccc--hhHHHHHHHHHH
Q 011743 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFG-STFLLCLVGGFISDTYLS--RFATCLVFGTLE 92 (478)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~G--r~~~~~~~~~~~ 92 (478)
..+...+..++....++++..++|.|+++++|+++.+++.+.+...+ +..++.+++|+++|| ++ .|+++.+++++.
T Consensus 331 ~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r-~~~~~~~~~~~~~~~~ 409 (633)
T TIGR00805 331 IYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKK-FKLNVKKAAYFAICLS 409 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeee-ecccHHHHHHHHHHHH
Confidence 46667788888999999999999999999999999999999988776 568899999999999 77 567888888777
Q ss_pred HHHHHHHHHHh-----h-------------------c----------ccCCCCCCCCC----------c-----------
Q 011743 93 VLSLVMLTIQA-----Y-------------------S----------KSLHPPDCGKS----------S----------- 117 (478)
Q Consensus 93 ~i~~~~~~~~~-----~-------------------~----------~~~~~~~~~~~----------~----------- 117 (478)
.++.++....- + . +....|=||.+ +
T Consensus 410 ~~~~~~~~~~~~~~C~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~~ 489 (633)
T TIGR00805 410 TLSYLLCSPLFLIGCESAPVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSNM 489 (633)
T ss_pred HHHHHHHHHHHeecCCCCccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCcc
Confidence 77654422100 0 0 00000101110 0
Q ss_pred --------------------c-ccchh-HHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHH
Q 011743 118 --------------------C-LKGAI-AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT 175 (478)
Q Consensus 118 --------------------~-~~~~~-~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (478)
| ++..+ +..+++..++..+..+.........+-+.+|+++ |.-+.|+.....
T Consensus 490 ~y~~CsCi~~~~~~~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~~~~------rs~alg~~~~~~ 563 (633)
T TIGR00805 490 VYTNCSCVQTPGNSSAKKGLCNPPCATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNPEE------KSLAIGLQWLCM 563 (633)
T ss_pred eecccccccCCCCCCCcCCCCCcccchhHHHHHHHHHHHHHHHHhccCchheEEeeccCccc------chHHhhHHHHHH
Confidence 1 12222 3445555555556556656666677889999998 899999998776
Q ss_pred H-HHHHHHHHHHHhhhcc
Q 011743 176 T-LAAMIGVTAIVYVFID 192 (478)
Q Consensus 176 ~-~g~~~~p~i~~~l~~~ 192 (478)
. +|.+=+|++-|.+.|.
T Consensus 564 rllg~iP~pi~fG~~iD~ 581 (633)
T TIGR00805 564 RVFATIPAPILFGLLIDV 581 (633)
T ss_pred HHhcCCChhHHHhhhhhc
Confidence 4 7889999998888774
No 246
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.51 E-value=0.00058 Score=57.64 Aligned_cols=96 Identities=21% Similarity=0.176 Sum_probs=72.3
Q ss_pred CchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHH
Q 011743 356 VLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQY 435 (478)
Q Consensus 356 ~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 435 (478)
....+..++..++.+++.|+..| ++.+..+..+.+++.+...+. .+.+.+....
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~-----------~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~ 58 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGR-----------KPVLLVGLFIFVLSTAMFALS---------------SNITVLIIAR 58 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcch-----------hHHHHHHHHHHHHHHHHHHHh---------------ccHHHHHHHH
Confidence 34556777777777776555433 344666766666666655543 3556677778
Q ss_pred HHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHhhccC
Q 011743 436 CIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 477 (478)
Q Consensus 436 ~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~~lg~ 477 (478)
++.+++.+...+....++.+..|++.|++++++.+...++|.
T Consensus 59 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 100 (141)
T TIGR00880 59 FLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGP 100 (141)
T ss_pred HHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHH
Confidence 999999999999999999999999999999999998877664
No 247
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.45 E-value=0.062 Score=53.50 Aligned_cols=156 Identities=12% Similarity=0.024 Sum_probs=90.0
Q ss_pred CcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhh-----hccchhHHHHH
Q 011743 13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISD-----TYLSRFATCLV 87 (478)
Q Consensus 13 ~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD-----r~~Gr~~~~~~ 87 (478)
-.+.+..+++. .+.+..-+|+..-+|..+ +.-|.|-++.+.....+ .=+-.-++...+.| | +||||.-++
T Consensus 29 d~~~illLl~L-YllQGiP~GL~~~iP~lL-~ak~vSyt~~a~fS~ay--~P~sLKllWaPiVDs~y~k~-~GrrksWvv 103 (510)
T KOG3574|consen 29 DRSSILLLLFL-YLLQGIPLGLIGAIPLLL-QAKGVSYTSQAIFSFAY--WPFSLKLLWAPIVDSVYSKR-FGRRKSWVV 103 (510)
T ss_pred hhhhHHHHHHH-HHHcCCchhHhhhhHHHh-cCCCcchhhhhhhhhhh--hHHHHHHHHHhhhHHHHHHh-hccccceee
Confidence 33445544444 444555577777555444 46677777765443322 22233456777888 8 999997653
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhH
Q 011743 88 FGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASY 167 (478)
Q Consensus 88 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~ 167 (478)
=. -+.+|.++..++... .++-.|+.++|+ ........++.-+..+.-.-++-...-.+..+++ .+-+
T Consensus 104 p~-q~llG~~mllLs~~v---~~~~g~ng~~p~---v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~------lgya 170 (510)
T KOG3574|consen 104 PC-QYLLGLFMLLLSYLV---DRGLGGNGGLPN---VVALTLLFLLLNFLAATQDIAVDGWALTMLSREN------LGYA 170 (510)
T ss_pred eh-HHHHHHHHHHHhhCC---CcccccCCCCcc---hHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhh------cCch
Confidence 32 234455555554311 111113443322 1222233456667777777788777778877766 7777
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 011743 168 FNFYLFATTLAAMIGVTAI 186 (478)
Q Consensus 168 ~~~~~~~~~~g~~~~p~i~ 186 (478)
.+-...+.+.|.+++-.+-
T Consensus 171 ST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 171 STCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred hHHHHHHHhhhHHhhccee
Confidence 7777778888888776543
No 248
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.41 E-value=0.0051 Score=54.10 Aligned_cols=111 Identities=11% Similarity=0.056 Sum_probs=81.2
Q ss_pred chhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHH
Q 011743 49 DIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFY 128 (478)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (478)
++..-..-+++......+..++++.+.++ +|.|+++.+|.+.+.+-....... +.+.++
T Consensus 35 ~~~~G~~slai~Y~~~~~s~l~~P~iv~~-lg~K~sm~lg~~~y~~y~~~~~~~--------------------~~~~l~ 93 (156)
T PF05978_consen 35 SAGLGYYSLAILYGSFAISCLFAPSIVNK-LGPKWSMILGSLGYAIYIASFFYP--------------------NSYTLY 93 (156)
T ss_pred cccccHHHHHHHHHHHHHHHHhHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhh--------------------hHHHHH
Confidence 33333344445555566666778888999 999999999998877544333211 567788
Q ss_pred HHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 011743 129 GSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAI 186 (478)
Q Consensus 129 ~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~ 186 (478)
.+-++.|+|.+..+.+...++.+..++++ +++..+++....+.+..+|..+.
T Consensus 94 ~~s~l~G~~~a~lW~aqg~ylt~~s~~~~------~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 94 PASALLGFGAALLWTAQGTYLTSYSTEET------IGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred HHHHHHhhhhHHhhHhhhHHHHHcCCHHH------HhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999877665 77777777666677766665544
No 249
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.34 E-value=0.00029 Score=71.17 Aligned_cols=180 Identities=11% Similarity=0.023 Sum_probs=117.8
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhH--------HHHHHHHHHHH-HhhHHHHHhhhccchhHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASN--------TLTNFFGSTFL-LCLVGGFISDTYLSRFATC 85 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~--------~~~~~~~~~~~-~~~~~G~laDr~~Gr~~~~ 85 (478)
+.+...+...++--.++|+...+...-+. .+|+.+.+... ...+...+..+ +.+++..+.|+ +|||+..
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~-~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~-iGRk~iq 381 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFS-AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDI-IGRKYIQ 381 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHH-hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeeh-hhhHHHH
Confidence 33444444555555666665555444333 34444433222 22333333333 77788899999 9999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhh
Q 011743 86 LVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALA 165 (478)
Q Consensus 86 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~ 165 (478)
+.+.+++++..+.+....+- +++ ....++.--+.+-++.-+-..+....-+|.||.+- |+
T Consensus 382 ~~GF~~~~i~~~~~~~~y~~---~~~-----------~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParv------R~ 441 (538)
T KOG0252|consen 382 LMGFFIMTIFFFVIAGPYNQ---LEN-----------TIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARV------RS 441 (538)
T ss_pred HhhHHHHHHHHHHHcCCccc---ccc-----------cCceeehHHHHHHHHhcCCCceeEEeehhhchHHH------hh
Confidence 99999998877776654310 001 11112222222334444444555667789999888 99
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhc-----cchhHHHHHHHHHHHHHHHHHHHhc
Q 011743 166 SYFNFYLFATTLAAMIGVTAIVYVFI-----DQGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 166 ~~~~~~~~~~~~g~~~~p~i~~~l~~-----~~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
.+.++.....-+|+.+|...-.++.+ ..+.+..|++.+.+++++.+..++.
T Consensus 442 t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~ 497 (538)
T KOG0252|consen 442 TCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI 497 (538)
T ss_pred hhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEe
Confidence 99999999999999999988888888 7789999999999988888776654
No 250
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=96.92 E-value=0.027 Score=59.18 Aligned_cols=120 Identities=8% Similarity=-0.113 Sum_probs=87.1
Q ss_pred HhHHHHHHHHHHHHHhhHHHHHhhhccchh-H------HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHH
Q 011743 53 ASNTLTNFFGSTFLLCLVGGFISDTYLSRF-A------TCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAA 125 (478)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~-~------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (478)
.++..++..+...+..|+.+++=.| .+|| | =+.+|+++.++++..+.++... ..+.|+ .+..
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~-l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~----~~~~~~------~s~~ 378 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKE-SVAGNRTVRIWGKFALGLGLMSAGFCILTLSARW----SAMYGH------SSLP 378 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHH-HhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhh----cCCCCC------cCHH
Confidence 4566667777777778888888666 5332 1 2667888888888877765421 011121 3677
Q ss_pred HHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHH-HHHHHHHHHHHHhh
Q 011743 126 YFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT-TLAAMIGVTAIVYV 189 (478)
Q Consensus 126 ~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~-~~g~~~~p~i~~~l 189 (478)
++++..+++++|.=...|...+++++..|++- ++..++.++... .+|..++..+.+..
T Consensus 379 wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~------~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 379 LMVLGLAVMGFAELFIDPVAMSQITRIEIPGV------TGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHHHHHHHHHHHHHChHHHHHHHHhChHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88899999999999999999999999999887 899999987643 57777666666555
No 251
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.90 E-value=0.008 Score=59.71 Aligned_cols=151 Identities=15% Similarity=0.093 Sum_probs=109.3
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHc-ccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccch-hHHHHHHHHHHH
Q 011743 16 ACTFVFVLSALENMGFIANGISMVLYF-KNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSR-FATCLVFGTLEV 93 (478)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~v~~~l~~yl-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr-~~~~~~~~~~~~ 93 (478)
..+..+....+.-.-.|..+-+...++ ...+|+++.|.|-+...-.+...+.+..-+...||+.|. +-....++.+..
T Consensus 261 ~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~v 340 (451)
T KOG2615|consen 261 SVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIV 340 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHH
Confidence 345555544444444444444444444 678999999999888877777777777777777775433 223344444444
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHH
Q 011743 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (478)
Q Consensus 94 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~ 173 (478)
-...+...+. ....++++..+-.+..+...++...++....|.++ |+...|....
T Consensus 341 P~~llls~~~-------------------~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~q------rG~~~Gi~~S 395 (451)
T KOG2615|consen 341 PAFLLLSLAR-------------------TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQ------RGTLNGIFRS 395 (451)
T ss_pred HHHHHHhccc-------------------cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCccc------chHHHHHHHH
Confidence 4444444432 56778899999999999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHHHHhhhc
Q 011743 174 ATTLAAMIGVTAIVYVFI 191 (478)
Q Consensus 174 ~~~~g~~~~p~i~~~l~~ 191 (478)
...++-++||.++|.+..
T Consensus 396 l~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 396 LGALARAIGPLVSGVIFS 413 (451)
T ss_pred HHHHHHHhhhhhhheeEE
Confidence 999999999999987754
No 252
>PTZ00207 hypothetical protein; Provisional
Probab=96.89 E-value=0.0042 Score=66.44 Aligned_cols=177 Identities=8% Similarity=-0.031 Sum_probs=120.0
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHccccc-CCchhh--HhHHHHHHHHHHHHHhhHHHHHhhhccchhH--------
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEM-HFDIAG--ASNTLTNFFGSTFLLCLVGGFISDTYLSRFA-------- 83 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~l-g~~~~~--~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~-------- 83 (478)
...|.+++..++...+-..+.-++. ++.+.+ |.+..+ ....++++.++++++.+.+|+++.. .-||+
T Consensus 353 ~d~Wll~~~~~cg~g~gl~~~~N~~-qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~-~~~~~~~~r~prt 430 (591)
T PTZ00207 353 ARLWCLLWSIFCCVGAHFVIIFNAR-FIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIW-SQKRRAEDRVPIT 430 (591)
T ss_pred hhHHHHHHHHHHhhCchheeeecHH-HHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHH-HHhhccccccchh
Confidence 4477777777776665554444443 344556 663322 2237899999999999999999833 33333
Q ss_pred -HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhh
Q 011743 84 -TCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAK 162 (478)
Q Consensus 84 -~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~ 162 (478)
.+.+..+ ..++++++.+.. ....++++-++.|++.|...+...+.++|.|. ++
T Consensus 431 ~~l~~~~~-~~~~~lll~~~~-------------------p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~----- 484 (591)
T PTZ00207 431 IALFIPSV-CIITMLTLFLTL-------------------PKAALPLPYFIAAFANGFMAATIALVTRTIFA-KD----- 484 (591)
T ss_pred HHHHHHHH-HHHHHHHHHHHC-------------------CccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cc-----
Confidence 2333333 566666666542 12568899999999999999999999999999 66
Q ss_pred hhhhHHHHHHHHHHHHHHHH-HHHHHhhhcc-------------chhHHHHHHHHHHHHHHHHHHHhcCcce
Q 011743 163 ALASYFNFYLFATTLAAMIG-VTAIVYVFID-------------QGWWLGFLISSVATLIGLIALAIGKPFY 220 (478)
Q Consensus 163 ~r~~~~~~~~~~~~~g~~~~-p~i~~~l~~~-------------~~~~~~f~i~~~~~~~~~~~~~~~~~~~ 220 (478)
-++-++..+.+.-+|..+- -.+.|.+-+. .-++.+|++.+.+++++.++....+-++
T Consensus 485 -~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~ 555 (591)
T PTZ00207 485 -PAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQY 555 (591)
T ss_pred -hHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeeh
Confidence 6788888777777777654 2344444221 1278899999888888887766554433
No 253
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.89 E-value=0.0093 Score=46.41 Aligned_cols=66 Identities=9% Similarity=0.017 Sum_probs=59.5
Q ss_pred HHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh
Q 011743 37 SMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQA 103 (478)
Q Consensus 37 ~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~ 103 (478)
.+.+.++++.++|.++++++.+...+++.++.+...++.++ ..+++.+..+.+...+..+.+.+..
T Consensus 13 plLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~-~~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 13 PLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRH-SRPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred hHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34456788999999999999999999999999999999999 7889999999999999998888764
No 254
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.85 E-value=0.0061 Score=63.41 Aligned_cols=126 Identities=13% Similarity=0.110 Sum_probs=107.8
Q ss_pred HHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHH-HHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCC
Q 011743 38 MVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGG-FISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKS 116 (478)
Q Consensus 38 l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G-~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 116 (478)
+..|+...++++..+.+...+.......+...+.. .+.-. +|-|+++..|+....+...+.++++
T Consensus 264 ~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~-l~~~~~i~lGl~~~~~~~~~~af~~------------- 329 (463)
T KOG2816|consen 264 LLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI-LGEKRLISLGLLSEFLQLLLFAFAT------------- 329 (463)
T ss_pred EEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhHhhHHHHHHHHHHHHHHHhc-------------
Confidence 35788889999999999999999999999998887 77777 8999999999999999999998876
Q ss_pred ccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 011743 117 SCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF 190 (478)
Q Consensus 117 ~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~ 190 (478)
+.++.+....+.++. +...|...++++.+.++++ +++.+++......+.+.++|.+-+.+.
T Consensus 330 ------~~w~~~~~~v~~~~~-~~~~pa~~s~~s~~v~~~e------~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 330 ------ETWMMFAAGVVVALA-GIVFPAIRAFASILVSPEE------QGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred ------cchhhhHHHHHHHhh-cchhHHHHhHHHhhccccc------ccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 566666666655444 7778999999999999988 999999999999999998888777653
No 255
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.83 E-value=0.17 Score=55.16 Aligned_cols=311 Identities=11% Similarity=-0.009 Sum_probs=180.8
Q ss_pred chhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHH
Q 011743 49 DIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFY 128 (478)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (478)
..........++.....+.++.....+|-.-|+-..+..-.....+..+...+.... . .+.........
T Consensus 18 lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~-a----------~~~~~~~~~~~ 86 (654)
T TIGR00926 18 LGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFG-A----------IPSSGHPLHDL 86 (654)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc-c----------CcccccchHHH
Confidence 334566778888999999999999999996666666666666666666666555420 0 00111134455
Q ss_pred HHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccch-hHH------HHH-
Q 011743 129 GSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG-WWL------GFL- 200 (478)
Q Consensus 129 ~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~-~~~------~f~- 200 (478)
+....+.++.++..+..+.+.+++.+..+ ...+.+..+++++..+.+.+ |..++..+..... +.. .|.
T Consensus 87 ~~l~gLaLia~G~GgiKp~vsaf~gdqf~---~~~~~~~~s~F~~fY~~iNi-GSlis~~i~~~l~~~~~~fg~~~~~~~ 162 (654)
T TIGR00926 87 LDLLGLALIALGTGGIKPCVSAFGGDQFE---ERQLSLRSRFFSFFYFAINA-GSLISTIITPILRGDVGCFGCQDCYPL 162 (654)
T ss_pred HHHHHHHHHHhhccccccCchhhhHhhcC---ccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhcccccCcchHH
Confidence 67777899999999999999999987654 44445688888888888876 4556655544333 211 233
Q ss_pred HHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhcCCCCCCCchhhhhhhhhhccCcccccCCCCccchhh
Q 011743 201 ISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLD 280 (478)
Q Consensus 201 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (478)
..++.+++.++.++.+...++..++++.+.....++.......++ ++ +
T Consensus 163 aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~----------------------------~~--~-- 210 (654)
T TIGR00926 163 AFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALR----------------------------KR--F-- 210 (654)
T ss_pred HHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHH----------------------------Hh--h--
Confidence 334444455555555544444434333222222222211111000 00 0
Q ss_pred hhccCCCCCCCCCCcccc--cchhhHHHHHHHHHHHHHHHHHHHHHhHhhcchhhhhhhcccCCCCCCcccCCCCccCch
Q 011743 281 KAAIVPKDSTAAAPWRVC--TVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGAYMDPRLGSIKVPTPSIPVLP 358 (478)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (478)
.....+....|.++ .+..+++.+...+++.++...+.+++.+.++......+....++..+.+...+.....++
T Consensus 211 ----~~~~~~~~~~~ld~a~~~~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~~m~~~l~g~~ip~~~lq 286 (654)
T TIGR00926 211 ----STRSEHWPLHWLDYAKDKHDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATRMDGDVGGFEIQPDQMQ 286 (654)
T ss_pred ----ccCCcccchhHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHhcCccCCEecCHHHHH
Confidence 00000001223222 222334567888888888888888888877666666666666665443333344556677
Q ss_pred hHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 011743 359 LLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVK 413 (478)
Q Consensus 359 ~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~ 413 (478)
.+-.+...++...+..++.+++.+ .-.+.+++.-+.+.+.++.+.....+..
T Consensus 287 ~~n~L~IIil~Pi~~~~lyp~l~~---~~~~ls~l~k~~iG~~la~la~~va~~v 338 (654)
T TIGR00926 287 VVNPLLILIFVPIFDYIVYPAIAK---CGTRFTSLRKMAVGGLLAALSFFVAALV 338 (654)
T ss_pred HHHHHHHHHhHHHHHHhHHHHHHh---cCCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 777777777777666677777631 1123455666666666666555555433
No 256
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.68 E-value=0.0014 Score=66.38 Aligned_cols=166 Identities=17% Similarity=0.124 Sum_probs=118.6
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhc---cchhHHHHHHHH-
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY---LSRFATCLVFGT- 90 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Gr~~~~~~~~~- 90 (478)
+.+..+....+.-.+++-.=..++++|++ .+|.+....+.+-.+.-+...+.+|+.|..+||- |||||-++....
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 44555555566666665544567888865 7999999999999999999999999999999974 899887776654
Q ss_pred HHHHHHHHHHHHhhcc-cCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHH
Q 011743 91 LEVLSLVMLTIQAYSK-SLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (478)
Q Consensus 91 ~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~ 169 (478)
..+++.++...+..+. .+.++.. ..-|......++++.-+.=+..-..+...-++++|+...++.+ .++.+
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd~~~---~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~-----~~Ans 182 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGDNER---KPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKK-----TRANS 182 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcCCcc---cccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhh-----hccch
Confidence 5666777766654221 1111100 0112345667777777777888888889999999998876621 12888
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 011743 170 FYLFATTLAAMIGVTAIVYV 189 (478)
Q Consensus 170 ~~~~~~~~g~~~~p~i~~~l 189 (478)
++...+.+|..+|...+++.
T Consensus 183 ~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 183 VFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred hHHHHHHhcceeeeeccccc
Confidence 88889999999988877654
No 257
>PRK03612 spermidine synthase; Provisional
Probab=96.61 E-value=0.11 Score=55.09 Aligned_cols=161 Identities=14% Similarity=0.036 Sum_probs=87.8
Q ss_pred HHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHH-HHHHHHH-HHHHHHHHH
Q 011743 25 ALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCL-VFGTLEV-LSLVMLTIQ 102 (478)
Q Consensus 25 ~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~-~~~~~~~-i~~~~~~~~ 102 (478)
++..++..+.-....-.+...+|-+..+.+.+++++..+..++..++|+++++ .-|+.... ++..+.. ++..++...
T Consensus 24 f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~-~~~~~~~~e~~i~l~~~~~~~ll~~~ 102 (521)
T PRK03612 24 FVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD-AAAGFVAVELLLALLGGLSALILYAA 102 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333444444555678888999999999999999999999988755 22222211 1111111 111111111
Q ss_pred hhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHH
Q 011743 103 AYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIG 182 (478)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 182 (478)
.. .. .......+...++.++..|+..|....+..+... ++ -++..+-.|....+|+++|
T Consensus 103 ~~--~~------------~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~------~g~~~g~ly~~ntlGa~~G 161 (521)
T PRK03612 103 FA--FQ------------GLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-QH------LGHNVATVLAADYLGALVG 161 (521)
T ss_pred HH--HH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cc------hhhhhhhhHhHHhHHHHHH
Confidence 10 00 0011222333445666667777766655544322 11 3456677778888888888
Q ss_pred HHHHHhhhc-cchhHHHHHHHHHHHH
Q 011743 183 VTAIVYVFI-DQGWWLGFLISSVATL 207 (478)
Q Consensus 183 p~i~~~l~~-~~~~~~~f~i~~~~~~ 207 (478)
..+.+++.- ..|-....++.+.+.+
T Consensus 162 ~l~~~~vLlp~lG~~~t~~~~a~l~~ 187 (521)
T PRK03612 162 GLAFPFLLLPRLGLIRTAALTGSLNL 187 (521)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 888886654 4665544444444443
No 258
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=96.57 E-value=0.034 Score=57.58 Aligned_cols=99 Identities=6% Similarity=-0.042 Sum_probs=75.2
Q ss_pred CCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHH
Q 011743 352 PSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWL 431 (478)
Q Consensus 352 ~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 431 (478)
+.+......+-.+.....+.+.|++ +.++.+.++.+.-++..++.++. .++..+
T Consensus 65 G~I~s~F~ysYal~qIp~GlLaDrl-----------G~K~vL~l~~l~Wsl~t~L~~fa---------------~Sl~~L 118 (511)
T TIGR00806 65 NEIIPVLPYSHLAVLVPVFLLTDYL-----------RYKPVLVLQALSFVCVWLLLLLG---------------TSVWHM 118 (511)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHh-----------CchHHHHHHHHHHHHHHHHHHHH---------------HHHHHH
Confidence 3333334444455555555554443 44566778887777777777776 467888
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHhhccC
Q 011743 432 SFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT 477 (478)
Q Consensus 432 ~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~~lg~ 477 (478)
...-++.|++|+... ....++++..|+++|++++|+++....+|.
T Consensus 119 ~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~ 163 (511)
T TIGR00806 119 QLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGV 163 (511)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999 999999999999999999999999988874
No 259
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.49 E-value=0.055 Score=57.40 Aligned_cols=145 Identities=7% Similarity=-0.046 Sum_probs=90.1
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHH
Q 011743 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (478)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~ 95 (478)
....+.+..+.....||++.... ..+|.+......+... .........+.+.|+ +|||.....+..+..++
T Consensus 323 ~~~~~~~~~~~~~~~y~gl~~~~-----~~lg~~~~~~~~~~~~---~~~p~~~~~~~~~~~-~gR~~~~~~~~~~~~~~ 393 (521)
T KOG0255|consen 323 RTLYLLFIWFVFSLVYYGLSLNV-----SGLGGNIYLNFTLSGL---VELPAYFRNGLLLPE-FGRRPPLFLSLFLAGIG 393 (521)
T ss_pred HHHHHHHHHHHHhHHHHhhhhhh-----hhcCchHHHHHHHHHH---HHhhHHHHHHHHHHH-hCcHHHHHHHHHHHHHH
Confidence 34444444444455555444332 3355444433333333 444455566899999 89999999999999998
Q ss_pred HHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHH
Q 011743 96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT 175 (478)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (478)
.+....... ....+...+...+...+.+...-....+.+|++|+.. |..+.+......
T Consensus 394 ~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~------r~~~~~~~~~~~ 451 (521)
T KOG0255|consen 394 LLLFGWLPD----------------DLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVV------RNTAVGAISAAA 451 (521)
T ss_pred HHHHHHhhc----------------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHHH
Confidence 888876541 1110112222222223333333444788899999887 899999999999
Q ss_pred HHHHHHHHHHHHhhhc
Q 011743 176 TLAAMIGVTAIVYVFI 191 (478)
Q Consensus 176 ~~g~~~~p~i~~~l~~ 191 (478)
.+|..++|.+......
T Consensus 452 ~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 452 RLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999987755543
No 260
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.38 E-value=0.029 Score=57.05 Aligned_cols=183 Identities=16% Similarity=0.089 Sum_probs=106.9
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhH-HHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFA-TCLVFGTLEVLS 95 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~-~~~~~~~~~~i~ 95 (478)
..++++..-+....+|++...+- -....-|+++..+|.+-....+.++++..+.|.++|| ....| ++++......++
T Consensus 268 F~il~~~ygi~~g~F~~l~~~l~-~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dk-tk~fk~~~~v~~~~~~v~ 345 (480)
T KOG2563|consen 268 FIILAICYGIGLGLFNSLSTLLN-LALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADK-TKKFKLTTLVLYLFALVG 345 (480)
T ss_pred HHHHHHHHhhhHHHHHHHHHHhh-hccccccCCccccchhHHHHHHHHHHHHHHHHhhhhh-hhhHHHHHHHHHHHHHHH
Confidence 44444555555555555554443 2234567888899999999999999999999999999 66544 444444444444
Q ss_pred HHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCC-CCCChhhhhhhhhHHHHHHHH
Q 011743 96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQF-DENDPKGAKALASYFNFYLFA 174 (478)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~-~~~~~~~~~~r~~~~~~~~~~ 174 (478)
...+..... . ....+.++....+.|...-...|.-.-+..|.. |..+ +.-.|+....
T Consensus 346 ~~~l~~~t~-------~--------~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E-------~tSsGll~~~ 403 (480)
T KOG2563|consen 346 TLMLLTCTL-------F--------LGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAE-------GTSSGLLNLS 403 (480)
T ss_pred HHHHHHhhc-------c--------CCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCC-------cccceeEEee
Confidence 322222211 0 113444556666777777778887777766654 4433 3445555555
Q ss_pred HHHHHHHHHHHHHhhhccch----hHHHHHHHHHHHHHHHHHHHhcCcceeec
Q 011743 175 TTLAAMIGVTAIVYVFIDQG----WWLGFLISSVATLIGLIALAIGKPFYRIQ 223 (478)
Q Consensus 175 ~~~g~~~~p~i~~~l~~~~~----~~~~f~i~~~~~~~~~~~~~~~~~~~~~~ 223 (478)
.++-+++-..+.+...+..+ +...-+...+...+.+++..+.+++++..
T Consensus 404 gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~ 456 (480)
T KOG2563|consen 404 GQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRL 456 (480)
T ss_pred hhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhH
Confidence 55555555555666665555 44333334444455555556666655443
No 261
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.90 E-value=0.24 Score=53.86 Aligned_cols=169 Identities=14% Similarity=0.102 Sum_probs=114.6
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHH-HHHHhhHHHHHhhhc-cchhHHHHHHHHHHHH
Q 011743 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGS-TFLLCLVGGFISDTY-LSRFATCLVFGTLEVL 94 (478)
Q Consensus 17 ~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~-~~~~~~~~G~laDr~-~Gr~~~~~~~~~~~~i 94 (478)
.....+...++...+-+.++|+|-|+.+++|.++..+..+.+...+. ..++..++|++.-|+ ++.|.+..+.++...+
T Consensus 394 f~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l 473 (735)
T KOG3626|consen 394 FMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVL 473 (735)
T ss_pred HHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHH
Confidence 33456788999999999999999999999999999999999666554 667778999999985 5556666666655555
Q ss_pred HHHHHHHHhhc-----------------c--------------------cCCCCCCCCC---------------------
Q 011743 95 SLVMLTIQAYS-----------------K--------------------SLHPPDCGKS--------------------- 116 (478)
Q Consensus 95 ~~~~~~~~~~~-----------------~--------------------~~~~~~~~~~--------------------- 116 (478)
..+.....-.+ + ....|-||.+
T Consensus 474 ~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~ 553 (735)
T KOG3626|consen 474 SLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDG 553 (735)
T ss_pred HHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCC
Confidence 44432111000 0 0000111111
Q ss_pred -----cc---c----------------c-chhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHH
Q 011743 117 -----SC---L----------------K-GAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (478)
Q Consensus 117 -----~~---~----------------~-~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~ 171 (478)
|| + + ...+..+++..++..+..+...+...-++-+.+++++ |.-+.|+.
T Consensus 554 ~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~------ks~AlG~~ 627 (735)
T KOG3626|consen 554 NTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEE------KSFALGFQ 627 (735)
T ss_pred ceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchh------chhhhHHH
Confidence 11 1 1 1233444444555556666666777778889999988 89999999
Q ss_pred HHHHH-HHHHHHHHHHHhhhc
Q 011743 172 LFATT-LAAMIGVTAIVYVFI 191 (478)
Q Consensus 172 ~~~~~-~g~~~~p~i~~~l~~ 191 (478)
.+... +|.+=+|++-|++.+
T Consensus 628 ~~~irllg~IPsPIifG~~ID 648 (735)
T KOG3626|consen 628 WMLIRLLGFIPSPIIFGAVID 648 (735)
T ss_pred HHHHHHHhcCCchHhhhhhHh
Confidence 87765 788999999998864
No 262
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=95.63 E-value=3.4 Score=43.05 Aligned_cols=51 Identities=12% Similarity=0.208 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHhhccCC
Q 011743 428 LFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLATS 478 (478)
Q Consensus 428 ~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~~lg~~ 478 (478)
+..++.++++..+..-..++..++|-++++++..=|++|.+.|...++|+.
T Consensus 405 f~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGt 455 (544)
T PF13000_consen 405 FLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGT 455 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCC
Confidence 345667888888898999999999999999999999999999999999973
No 263
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.43 E-value=0.004 Score=66.21 Aligned_cols=168 Identities=11% Similarity=0.070 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHH-HHHHHhhHHHHHhhhc-cchhHHHHHHHHHHHHHH
Q 011743 19 FVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFG-STFLLCLVGGFISDTY-LSRFATCLVFGTLEVLSL 96 (478)
Q Consensus 19 ~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~-~~~~~~~~~G~laDr~-~Gr~~~~~~~~~~~~i~~ 96 (478)
...+...++.+...++.+|+|.|+++++++++.+++.+.++..+ +..++.+++|++..|+ ++.|+++.+..+...++.
T Consensus 309 ~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~ 388 (539)
T PF03137_consen 309 CLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSV 388 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHH
Confidence 34567778888888999999999999999999999999877766 5778889999999995 455666666665555544
Q ss_pred HHHH-----HHhhcc--cCCCCC------CC--C------------------Ccccc--chhHHHHHHHHHHHHhccccc
Q 011743 97 VMLT-----IQAYSK--SLHPPD------CG--K------------------SSCLK--GAIAAYFYGSLYLYSLGCGGN 141 (478)
Q Consensus 97 ~~~~-----~~~~~~--~~~~~~------~~--~------------------~~~~~--~~~~~~~~~~~~l~gig~g~~ 141 (478)
++.. -..+.+ -+..++ .. + ..|+. ...+..+++..++..+..+..
T Consensus 389 ~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~ 468 (539)
T PF03137_consen 389 ILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMS 468 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhc
Confidence 3311 111111 001111 00 0 01111 123455556566666666666
Q ss_pred cccccccccCCCCCCChhhhhhhhhHHHHHHHHH-HHHHHHHHHHHHhhhcc
Q 011743 142 RGTLPALGAGQFDENDPKGAKALASYFNFYLFAT-TLAAMIGVTAIVYVFID 192 (478)
Q Consensus 142 ~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~-~~g~~~~p~i~~~l~~~ 192 (478)
.......+-+.+|+++ |.-+.|+..... -+|.+=||++-|.+.+.
T Consensus 469 ~~p~~~i~LR~V~~~~------rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 469 QVPSTLITLRCVPPEQ------RSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ----------------------------------------------------
T ss_pred ccchheeeeccCChhh------cchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 6666677779999888 899999988665 57889999998888774
No 264
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=94.69 E-value=0.87 Score=47.01 Aligned_cols=135 Identities=10% Similarity=0.002 Sum_probs=103.4
Q ss_pred HHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCC
Q 011743 36 ISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGK 115 (478)
Q Consensus 36 ~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 115 (478)
..+..|+..+ |+++...|..-+...+....+.++..++.+| +|..|+=.++.........+...+-..+. .
T Consensus 279 ~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~r-iGlvr~G~~~l~~q~~~L~~~v~~~~~~~-------~ 349 (432)
T PF06963_consen 279 GLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKR-IGLVRAGLWSLWWQWVCLALCVVSFWAPG-------S 349 (432)
T ss_pred HHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchhhHHHHHHHHHHHHHHHHHHHhcCC-------C
Confidence 4567788877 9999999999999999999999999999999 89999988888876655444433221110 0
Q ss_pred CccccchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 011743 116 SSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIV 187 (478)
Q Consensus 116 ~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~ 187 (478)
.. ...+...++.+..+-=+|--++.-++.-++.|..|+++ |+...+......++.-.+...++-
T Consensus 350 ~~--~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~------Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 350 PF--SSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESE------RGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred Cc--hhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHH------hhHHHHHHHHHHHHHHHHHHHHHh
Confidence 00 02255666666666668888999999999999999888 999999999888888877765544
No 265
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=93.47 E-value=0.66 Score=48.07 Aligned_cols=143 Identities=10% Similarity=-0.096 Sum_probs=94.1
Q ss_pred hHHHHHHHHHHHHHhhHHHHHhhhccchh-------HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHH
Q 011743 54 SNTLTNFFGSTFLLCLVGGFISDTYLSRF-------ATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAY 126 (478)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~G~laDr~~Gr~-------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (478)
.+..+...+...++.|+..++--+ .+++ .-+-++++++..+++++..... ...++.| ..+.++
T Consensus 327 ~~fQslNp~~Iii~~pI~a~l~~~-l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~---~~~~~~~------~~s~~~ 396 (498)
T COG3104 327 AWFQSLNPFFIILFSPILAALWTK-LGRGNKQPSTPIKFALGLILAGLGFLILLLAGI---WFGGPSG------LVSVWW 396 (498)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHhH-hhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHH---hhcCCCC------CcCHHH
Confidence 444555556666777777777666 4544 2455667777777777665521 0011112 237889
Q ss_pred HHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHh------hhccchhHHHHH
Q 011743 127 FYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVY------VFIDQGWWLGFL 200 (478)
Q Consensus 127 ~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~------l~~~~~~~~~f~ 200 (478)
++.+.+++++|.=+..|...++++...|+.- .+..++++......|..++..+.+. ..+.......|.
T Consensus 397 lil~y~l~s~gEL~iSpvGLs~~t~laP~~~------~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~ 470 (498)
T COG3104 397 LVLSYVLQSFGELFISPVGLSMVTKLAPPAL------KSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFG 470 (498)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHhChHHH------HHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHH
Confidence 9999999999999999999999999999765 6788888888777787777666652 112234455666
Q ss_pred HHHHHHHHHHHH
Q 011743 201 ISSVATLIGLIA 212 (478)
Q Consensus 201 i~~~~~~~~~~~ 212 (478)
..+...++....
T Consensus 471 ~~g~v~i~~~~~ 482 (498)
T COG3104 471 TIGVVAIVIGIL 482 (498)
T ss_pred HHHHHHHHHHHH
Confidence 665555443333
No 266
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=92.73 E-value=0.64 Score=44.33 Aligned_cols=148 Identities=9% Similarity=0.019 Sum_probs=89.7
Q ss_pred ccCCchhhH--hHHHHHHHHHHHHHhhHHHHHhhhccchhH---HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccc
Q 011743 45 EMHFDIAGA--SNTLTNFFGSTFLLCLVGGFISDTYLSRFA---TCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCL 119 (478)
Q Consensus 45 ~lg~~~~~~--~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (478)
.+.-+++++ |.+.+.|..+.+++.-+...+..| .|.| .+.+...+......+..+... ++|
T Consensus 274 aLspn~e~iPhGfiFatFMlASmLGSSla~Rl~s~--s~~~ve~ymqivf~vs~a~l~Lpilt~~------------vsP 339 (454)
T KOG4332|consen 274 ALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSR--SSPKVESYMQIVFLVSIAALLLPILTSS------------VSP 339 (454)
T ss_pred cCCCCcccCCchhHHHHHHHHHHHhhHHHHHHHhc--CCcccchHHHHHHHHHHHHHHHHHHHhc------------cCC
Confidence 344344443 677777777777776666555555 2222 344444444433333222210 111
Q ss_pred cchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHH
Q 011743 120 KGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGF 199 (478)
Q Consensus 120 ~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f 199 (478)
..+++..-+++-.+.-.+.|.++|.+.-+=.+..|++. |.+.+++++...|+-.-++-...-.=....+-|..|
T Consensus 340 ~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEea------rstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf 413 (454)
T KOG4332|consen 340 SKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEA------RSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMF 413 (454)
T ss_pred CcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHH------HhhhhhheechhhHhhhhhheecccccCccccchhh
Confidence 12355555677777888999999999999999999888 999999999888876554322100001123457788
Q ss_pred HHHHHHHHHHHHH
Q 011743 200 LISSVATLIGLIA 212 (478)
Q Consensus 200 ~i~~~~~~~~~~~ 212 (478)
-++.+.+.++.+.
T Consensus 414 ~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 414 GICSAFLFVASIL 426 (454)
T ss_pred hhhHHHHHHHHHH
Confidence 8888877766544
No 267
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=92.60 E-value=12 Score=39.45 Aligned_cols=162 Identities=9% Similarity=0.033 Sum_probs=87.2
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCC---chhhHhHHHHHHHH-HHHHHhhHHHHHhhhccchhHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHF---DIAGASNTLTNFFG-STFLLCLVGGFISDTYLSRFATCLVFGT 90 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~---~~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Gr~~~~~~~~~ 90 (478)
+..+.+.+..++..+.|..+. -+++.+=+ +++....+-.-..+ ...+...+-.+++|+ ++|.|++.+...
T Consensus 24 ~k~~~l~~m~f~i~f~y~~lR-----~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~-~s~~~lFy~~~~ 97 (491)
T PF03219_consen 24 KKFLPLALMFFFILFNYTILR-----DLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNR-LSREKLFYIIII 97 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----HhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHHHHHHHHHH
Confidence 335555555555555543222 23333322 34444444443333 455556778999999 899998887776
Q ss_pred HHHHHHHHHHHH--hhcccCCCCCCCC---Cccccc----------hhHHHHHHHHHHHH-hccccccccccccccCCCC
Q 011743 91 LEVLSLVMLTIQ--AYSKSLHPPDCGK---SSCLKG----------AIAAYFYGSLYLYS-LGCGGNRGTLPALGAGQFD 154 (478)
Q Consensus 91 ~~~i~~~~~~~~--~~~~~~~~~~~~~---~~~~~~----------~~~~~~~~~~~l~g-ig~g~~~~~~~~~i~~~~~ 154 (478)
.+..-+.+.+.. ..-..++|...-. ...+.+ ++...+++.--+.| +..+ -....+..|.++
T Consensus 98 ~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlS---lLFW~fAN~itt 174 (491)
T PF03219_consen 98 PFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLS---LLFWGFANEITT 174 (491)
T ss_pred HHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHhcCC
Confidence 665554444432 1112334422200 000000 01122222222221 1111 123667778887
Q ss_pred CCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 011743 155 ENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI 191 (478)
Q Consensus 155 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 191 (478)
.++ -.|.++++..+.|+|..++..+..++.+
T Consensus 175 ~~e------AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 175 VEE------AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666 5689999999999999999988888776
No 268
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=91.52 E-value=8 Score=33.93 Aligned_cols=73 Identities=5% Similarity=-0.018 Sum_probs=56.4
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHH
Q 011743 387 ITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLL 466 (478)
Q Consensus 387 ~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~ 466 (478)
+++++-+.+|.++.++-...... .+.+.+.+.-++.|+|..+.+...-.+..+...++.+++..
T Consensus 64 lg~K~sm~lg~~~y~~y~~~~~~----------------~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~ 127 (156)
T PF05978_consen 64 LGPKWSMILGSLGYAIYIASFFY----------------PNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNT 127 (156)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHh----------------hhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHH
Confidence 36667788887766543332211 35577788889999999999999999999999999999999
Q ss_pred HHHHHHhhc
Q 011743 467 HLHFCHCHL 475 (478)
Q Consensus 467 g~~~~~~~l 475 (478)
+++......
T Consensus 128 ~ifw~i~~~ 136 (156)
T PF05978_consen 128 GIFWAIFQS 136 (156)
T ss_pred HHHHHHHHH
Confidence 988776553
No 269
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=89.38 E-value=0.38 Score=50.02 Aligned_cols=196 Identities=12% Similarity=-0.007 Sum_probs=111.3
Q ss_pred cchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhH----hHHHHHHHHHHHHHhhHHHHHh-hhccchhHHHHHH
Q 011743 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGA----SNTLTNFFGSTFLLCLVGGFIS-DTYLSRFATCLVF 88 (478)
Q Consensus 14 ~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~----~~~~~~~~~~~~~~~~~~G~la-Dr~~Gr~~~~~~~ 88 (478)
++..+.+.+..+...+.+..+-...+.+....++.+.+++ +.+.++..+......+.-++.. -+ +-+|+.+..+
T Consensus 261 ~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~-i~~r~~~~~g 339 (488)
T KOG2325|consen 261 WVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGK-IDKRRIILLG 339 (488)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhh-hccceeeeeh
Confidence 4556666777777777776656666666666677766665 4444444444444444444433 22 2335555545
Q ss_pred -HHHHHHHHHHHH-HHhhc-ccC-CCCCC-CC----Ccc-ccc--hhHHHHHHH-HHHHHhccccccccccccccCCCCC
Q 011743 89 -GTLEVLSLVMLT-IQAYS-KSL-HPPDC-GK----SSC-LKG--AIAAYFYGS-LYLYSLGCGGNRGTLPALGAGQFDE 155 (478)
Q Consensus 89 -~~~~~i~~~~~~-~~~~~-~~~-~~~~~-~~----~~~-~~~--~~~~~~~~~-~~l~gig~g~~~~~~~~~i~~~~~~ 155 (478)
+..+..-.+.+. ..... |.. ++.++ |. ..| .+. .+.+.+++. .++.|++...+.....++.++...+
T Consensus 340 ~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp 419 (488)
T KOG2325|consen 340 FLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGP 419 (488)
T ss_pred HHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCC
Confidence 333332222211 11000 111 11111 11 011 000 122333333 3446666666667778889999998
Q ss_pred CChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhc
Q 011743 156 NDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 156 ~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
.+ .+...+.+.....++..+||.+...+....|.++...+.++..++...++...
T Consensus 420 ~~------q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~~~ 474 (488)
T KOG2325|consen 420 RD------QGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALWIVF 474 (488)
T ss_pred cc------ccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHHHHH
Confidence 87 78888888888999999999999888888888888887777666555544433
No 270
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=89.12 E-value=2.8 Score=43.10 Aligned_cols=157 Identities=10% Similarity=-0.021 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHHHHHHHhHhhcchhhhhhhcccCCCCCCcccCCCCccCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCC
Q 011743 308 ILARMMPILASTIIMNTCLAQLQTLSVTQGAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGI 387 (478)
Q Consensus 308 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~ 387 (478)
++...........+.|..-.++.+.+.++. +.. ..-.+.++.+.++..++.+|+.+...|+.--|..
T Consensus 33 ~li~v~~ia~Gvqf~wA~elsy~tPyl~~l-Gvp------hk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~G------ 99 (498)
T KOG0637|consen 33 KLISVASIAAGVQFGWALELSYLTPYLQSL-GVP------HKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYG------ 99 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHHc-CCC------cccccccccccccccceecccccccccccccccc------
Confidence 344444555666777888777777776542 233 2345778888999999999999998887544432
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-C-CCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHH-
Q 011743 388 TQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQ-S-PPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTL- 464 (478)
Q Consensus 388 ~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~- 464 (478)
+++--+..+.+..++++++..+....-....++ + .+.+-.+...+..+.+.=++.-.+..+.-++..+..-.+.|-+
T Consensus 100 RRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~ 179 (498)
T KOG0637|consen 100 RRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTR 179 (498)
T ss_pred cccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhc
Confidence 223346777788888888777764322222222 1 1223455556667777777877888888889888887666666
Q ss_pred HHHHHHHHhhccC
Q 011743 465 LLHLHFCHCHLAT 477 (478)
Q Consensus 465 ~~g~~~~~~~lg~ 477 (478)
+.+.+.++.++||
T Consensus 180 Ans~f~~f~avGn 192 (498)
T KOG0637|consen 180 ANSVFSFFMAVGN 192 (498)
T ss_pred cchhHHHHHHhcc
Confidence 9999999999887
No 271
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=88.64 E-value=0.44 Score=49.42 Aligned_cols=158 Identities=16% Similarity=0.031 Sum_probs=89.2
Q ss_pred ccccC---CchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccc
Q 011743 43 KNEMH---FDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCL 119 (478)
Q Consensus 43 ~~~lg---~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (478)
.++++ +++...+.+..+..++..++..+....--+ +.-|+++..+.++.++..+.-.+.-. .+ .-++|.+
T Consensus 244 ~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~-~~~R~~~~~t~~~~~~~~l~~~~lv~-~~--n~~~Gi~--- 316 (433)
T PF03092_consen 244 TDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSN-WSWRRIFVVTTLVSVLASLFDLLLVT-RW--NLDLGIP--- 316 (433)
T ss_pred eccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHHhcccEEEEE-EE--eeeeCcC---
Confidence 34566 888888888877777766666655433333 35677777666665554433211100 00 0012322
Q ss_pred cchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccch-----
Q 011743 120 KGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG----- 194 (478)
Q Consensus 120 ~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~----- 194 (478)
+.+..+.--++..+..+...-....++++..|++. -++.+++.....|+|..++..++..+.+.++
T Consensus 317 ---d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~------Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~ 387 (433)
T PF03092_consen 317 ---DQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGS------EGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDD 387 (433)
T ss_pred ---CeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCc------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 11111222223333333333444566889999887 6899999999999999999999888865433
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHhc
Q 011743 195 ---WWLGFLISSVATLIGLIALAIG 216 (478)
Q Consensus 195 ---~~~~f~i~~~~~~~~~~~~~~~ 216 (478)
-++..+++.++.++.+....+.
T Consensus 388 f~~l~~lili~~~~~ll~l~ll~lL 412 (433)
T PF03092_consen 388 FSNLWLLILICSVIQLLPLPLLFLL 412 (433)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHc
Confidence 3344455555554444444333
No 272
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=87.72 E-value=2.1 Score=42.46 Aligned_cols=48 Identities=8% Similarity=0.061 Sum_probs=40.7
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHh
Q 011743 426 ISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHC 473 (478)
Q Consensus 426 ~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~ 473 (478)
..+|++=..|++...--++..+....-+++....+.=|..-|+|++..
T Consensus 324 ~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvA 371 (433)
T KOG3810|consen 324 QHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVA 371 (433)
T ss_pred cceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHH
Confidence 467888888999888888888888888888888999999999888764
No 273
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.06 E-value=12 Score=39.05 Aligned_cols=108 Identities=15% Similarity=0.106 Sum_probs=65.6
Q ss_pred HHHHHHhhHHHHHh---hhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCC--CCCCCCccccchhHHHHHHHHHHHHh
Q 011743 62 GSTFLLCLVGGFIS---DTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHP--PDCGKSSCLKGAIAAYFYGSLYLYSL 136 (478)
Q Consensus 62 ~~~~~~~~~~G~la---Dr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~gi 136 (478)
.+..++....+.+. ++ +||++++.++.++..++.++..+.. |...| +.-... ...+.+.....+--+++|+
T Consensus 290 ~g~v~~g~~~~~l~~rir~-fg~~~~~~~~~~~~~~~~~li~l~~--p~dap~~~t~~~~-~~~~~~~~~~~ii~~l~G~ 365 (461)
T KOG3098|consen 290 LGEVIGGLDFSILSKRIRG-FGRKPTVLIGIIIHLIGFLLIHLSF--PNDAPLRPTDSPP-LLFTPSYYLALIIGFLLGF 365 (461)
T ss_pred HHHHHHHHHHHHHhhhhhh-cccCcchhHHHHHHHHHHHHHhccc--cccCCCCCCcccc-cccccchhHHHHHHHHHhh
Confidence 33444445555565 45 7899999999999888887776654 22211 000000 0001123344445577999
Q ss_pred ccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHH
Q 011743 137 GCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAM 180 (478)
Q Consensus 137 g~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 180 (478)
+-+......+.++++.+| ++ |..+++++..-..++..
T Consensus 366 ~D~~~~t~~~~ii~~~~~-~~------~~~~fsi~kfyq~~~s~ 402 (461)
T KOG3098|consen 366 GDACFNTQRYVIIALLYP-DD------RAQAFSLFKFYQSVASC 402 (461)
T ss_pred HHHHHHHHHHHHHHHHhc-Cc------hHHHHHHHHHHHHHHHH
Confidence 999999999999999995 44 56666665544444443
No 274
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=86.32 E-value=3.8 Score=42.53 Aligned_cols=155 Identities=10% Similarity=-0.043 Sum_probs=87.7
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccc-cCCchh-hHhHHHHHHHHHHHHHhhHHHHHhhhccchh-HHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNE-MHFDIA-GASNTLTNFFGSTFLLCLVGGFISDTYLSRF-ATCLVFGTL 91 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~-lg~~~~-~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~-~~~~~~~~~ 91 (478)
|.+|..++..++..+....+.|-+....+.+ .+.+.. -.-.+..+|.++..++..+..+.. . -++| +.+.+..+.
T Consensus 269 kki~~~~~~vf~~F~vTL~vFPgv~~~i~~~~~~~~~~~~~~i~~~~fNvgD~vGR~~~~~~~-~-p~~~~~~l~i~s~~ 346 (437)
T TIGR00939 269 TKVWLLAFSVVFVFTVTLSVFPAITTAVTSSGLGLSNWFYPIICFLLFNLFDWLGRSLTSKFM-W-PDEDSRWLPILSFL 346 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCceEEEeeccCCCCCccHHHHHHHHHHHHHHHHHhhhhheeE-e-eCCCccchHHHHHH
Confidence 5566666665555554444444433333222 122332 334566677777777776554431 1 1222 244455555
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCccc-cchhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHH
Q 011743 92 EVLSLVMLTIQAYSKSLHPPDCGKSSCL-KGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF 170 (478)
Q Consensus 92 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~ 170 (478)
-.+-..++.++..-+ ..+ .| .-.+.+..++..++.|+..|........+..+..++++ |..+-.+
T Consensus 347 R~iFIPlf~lcn~~~----~~~----~p~~~~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e------~e~aG~~ 412 (437)
T TIGR00939 347 RVLFIPLFLLCNYPQ----RSR----LPVFFPGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHE------REVAGAL 412 (437)
T ss_pred HHHHHHHHHHhcCCc----ccc----CCeeecccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHH------HHHHHHH
Confidence 555555544443110 000 00 01255667777899999999999888888888887655 6677777
Q ss_pred HHHHHHHHHHHHHHH
Q 011743 171 YLFATTLAAMIGVTA 185 (478)
Q Consensus 171 ~~~~~~~g~~~~p~i 185 (478)
...+.++|-..|..+
T Consensus 413 ~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 413 MVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHHHHHHHHH
Confidence 777777777777654
No 275
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=85.57 E-value=7 Score=39.90 Aligned_cols=61 Identities=7% Similarity=-0.081 Sum_probs=50.9
Q ss_pred hHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Q 011743 123 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYV 189 (478)
Q Consensus 123 ~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l 189 (478)
+.+.+++..+..|+..|..+.+....+.|..|+++ |+-+++....+-++|..++..++-++
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~------REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPED------REFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 56777777888999999999999999999888777 88999988888888888877666544
No 276
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=71.72 E-value=11 Score=35.97 Aligned_cols=81 Identities=10% Similarity=0.096 Sum_probs=57.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHH
Q 011743 388 TQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLH 467 (478)
Q Consensus 388 ~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g 467 (478)
++...+.+|.++..+|+.+....-.. .. .+.+.|.+.....+.+.+....+.....-..+..|. +||++.|
T Consensus 64 gp~~~l~iG~~~~~~GY~~~~l~~~~---~i-----~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvg 134 (250)
T PF06813_consen 64 GPWVVLLIGAVLGFVGYGLLWLAVSG---RI-----PSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVG 134 (250)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhC---cc-----CccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceeh
Confidence 66677889999998898877665322 11 114566666666777777777777777777788985 6999999
Q ss_pred HHHHHhhccC
Q 011743 468 LHFCHCHLAT 477 (478)
Q Consensus 468 ~~~~~~~lg~ 477 (478)
+.-...++++
T Consensus 135 ilk~~~GLSa 144 (250)
T PF06813_consen 135 ILKGFFGLSA 144 (250)
T ss_pred hhhHHHHhHH
Confidence 8887777654
No 277
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=70.86 E-value=63 Score=31.92 Aligned_cols=115 Identities=12% Similarity=0.128 Sum_probs=64.8
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHcccccC--------------CchhhHhHHHHHHHHHHHHHhhHHHHHhhhc-cc
Q 011743 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMH--------------FDIAGASNTLTNFFGSTFLLCLVGGFISDTY-LS 80 (478)
Q Consensus 16 ~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg--------------~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~-~G 80 (478)
......+.-+||+++|..+..-.-.-+.++.+ -.....|.++..-.+-..+.-+...+.-||+ +|
T Consensus 13 ~~~~FwllGLcNN~~YVvmLSAA~DIl~~~~~~~~~~c~~h~~~r~c~~~stg~VLLaDilPsL~iKl~~Pff~~rfpf~ 92 (409)
T KOG3880|consen 13 IAVAFWLLGLCNNYGYVVMLSAAEDILSEQVSDPGPTCIPHNSGRECQSVSTGAVLLADILPSLAIKLTAPFFIHRFPFG 92 (409)
T ss_pred cchHHHHHHHhcccceEeehhhhhhhhccccCCCCCCcccccccccccccccchhhhhhhhHHHHHHHhchhhhhhcccc
Confidence 34445566689999876333222222222222 0111145555555566666667777788884 44
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccC
Q 011743 81 RFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAG 151 (478)
Q Consensus 81 r~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~ 151 (478)
.|.. +...+.+.+.++.+++. +.++-+++..+..++.|.-..+.-++-+.
T Consensus 93 ~Ri~--~~v~~sa~s~~lVafs~-------------------s~~~sL~GV~~aSissGlGEiTFL~lss~ 142 (409)
T KOG3880|consen 93 FRIA--LVVLLSALSFFLVAFSN-------------------SVPMSLLGVVFASISSGLGEITFLALSSR 142 (409)
T ss_pred hHHH--HHHHHHhcceEEEEecc-------------------chhHHHhhhhhhhhcCCcceeehhhhhcc
Confidence 4433 23445555555555443 67777788888888888766666554443
No 278
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=70.40 E-value=68 Score=31.94 Aligned_cols=115 Identities=5% Similarity=-0.096 Sum_probs=67.4
Q ss_pred CcchhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHH
Q 011743 13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE 92 (478)
Q Consensus 13 ~~~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 92 (478)
.-|.++.+-...++....|-+.. .+......++| ....+.+- ........+.+.+-.+ +|-|.++..+...+
T Consensus 27 ~~knv~i~s~~fl~~f~a~~gl~-nlq~~vn~~lg--~~sl~~~y----~~l~~s~m~~~~~Ir~-~g~K~tm~lav~~Y 98 (390)
T KOG3097|consen 27 ILKNVLILSIAFLLTFTAYLGLQ-NLQTSVNYDLG--TVSLGALY----LSLIDSSMFMPLLIRF-LGTKWTMVLAVFPY 98 (390)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHH-HHHHHHhcCcc--cchhhhhh----HHHHHHHHHHHHHHHH-HhhHHHHHHHHHHH
Confidence 45667765555555555544443 45444444333 22222222 2233333444477777 99999998777665
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccccccccccccCCCCC
Q 011743 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDE 155 (478)
Q Consensus 93 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~ 155 (478)
......-. -..+..++.+-...|+|.+....+--+++++.-..
T Consensus 99 ~lyiA~Nl--------------------~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ 141 (390)
T KOG3097|consen 99 ALYIAANL--------------------EPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQN 141 (390)
T ss_pred HHHHHhhc--------------------chhHHhhccHHHhhccccccccccCcceecHHHHH
Confidence 54322211 12556677778889999999998888888776443
No 279
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=67.97 E-value=19 Score=36.72 Aligned_cols=94 Identities=12% Similarity=0.031 Sum_probs=62.3
Q ss_pred hhHhHHHHH-HHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHH
Q 011743 51 AGASNTLTN-FFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYG 129 (478)
Q Consensus 51 ~~~~~~~~~-~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (478)
.-.-.+..+ |.+...++.+.+.|+-++ +||+.. +...+..+-..++.++...| .+.- -++.++++.
T Consensus 282 ~y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~-i~v~lR~lfiPlF~~cn~~~--~~v~--------~~~~~~~~~ 348 (406)
T KOG1479|consen 282 WYALLLVFLSFNVFDLIGSILAALLTWP--DPRKLT-IPVLLRLLFIPLFLLCNYPP--LPVV--------FESDGWFIF 348 (406)
T ss_pred hhHHHHHHHHhHHHHHhhhhhhhcccCC--CCceeh-HHHHHHHHHHHHHHHhccCC--CCce--------ecCchHHHH
Confidence 334455555 888888888888888777 444444 45555555555554443211 1110 125677778
Q ss_pred HHHHHHhccccccccccccccCCCCCCC
Q 011743 130 SLYLYSLGCGGNRGTLPALGAGQFDEND 157 (478)
Q Consensus 130 ~~~l~gig~g~~~~~~~~~i~~~~~~~~ 157 (478)
...++|+..|-.......+..+.+|+++
T Consensus 349 l~~~lglsnGYltsl~m~~aPk~v~~~e 376 (406)
T KOG1479|consen 349 LMSLLGLSNGYLTSLIMMYAPKQVKPSE 376 (406)
T ss_pred HHHHHHhccchHhhheehhcCCCCChHH
Confidence 8899999999999999999999988665
No 280
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=65.38 E-value=26 Score=28.41 Aligned_cols=39 Identities=21% Similarity=0.119 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHH
Q 011743 54 SNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE 92 (478)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~ 92 (478)
+.-++.-.++..+.....||+.|||.|.++.-++...+.
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lll 83 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLL 83 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 444556666777777788999999999887665554443
No 281
>PF01891 CbiM: Cobalt uptake substrate-specific transmembrane region; InterPro: IPR002751 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the integral membrane protein CbiM, which is involved in cobalamin synthesis, although its exact function in unknown.; GO: 0009236 cobalamin biosynthetic process, 0016021 integral to membrane
Probab=64.58 E-value=73 Score=29.17 Aligned_cols=98 Identities=11% Similarity=0.053 Sum_probs=56.0
Q ss_pred cCchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC--CccchHHHHH
Q 011743 355 PVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSP--PKQISLFWLS 432 (478)
Q Consensus 355 ~~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~ 432 (478)
...|.+.+.+......+...+..+|+ .+..+...+++...++...............+..+ ..........
T Consensus 105 lG~N~l~m~~~~~~~~~~~~~~l~~~-------~~~~~~~~~F~ag~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~ 177 (205)
T PF01891_consen 105 LGANALNMGVPPVLVSYLLFRLLRRK-------FPRNIFVAGFLAGFLSVLLAALAVSLVLGLSGTAGDYPWMALVQAYL 177 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc-------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHH
Confidence 34577877888888888777766664 12233444444344444433333221111111100 0113344556
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhccCCc
Q 011743 433 FQYCIFGIADMFTFVGLLEFFYKEAPA 459 (478)
Q Consensus 433 ~~~~l~g~ge~~~~p~~~~~~~~~aP~ 459 (478)
..+...++.|++.+....++..+.-|+
T Consensus 178 ~~~~~l~~~Eg~ltg~~v~~l~~~rP~ 204 (205)
T PF01891_consen 178 PSHLLLAFPEGFLTGMVVTFLVVYRPE 204 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 677888999999999998888877664
No 282
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=63.41 E-value=2e+02 Score=30.22 Aligned_cols=70 Identities=14% Similarity=0.180 Sum_probs=49.4
Q ss_pred HHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q 011743 134 YSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLI 208 (478)
Q Consensus 134 ~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~ 208 (478)
.++..-.....-...+.+++|+++. |...++-+....++...+.-.+++.+.+..||.....+.-++.++
T Consensus 276 y~~~~nlve~~~k~~v~~~~p~~~~-----~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 276 YGISINLVEVTWKSKLKAQYPSPNE-----YSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4444455555566778888875432 788888888877777766666668888889999877776665554
No 283
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=61.56 E-value=2.2e+02 Score=30.02 Aligned_cols=162 Identities=9% Similarity=0.040 Sum_probs=91.1
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcccccCCc---hhhHhHHHHHHHH-HHHHHhhHHHHHhhhccchhHHHHHHHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFD---IAGASNTLTNFFG-STFLLCLVGGFISDTYLSRFATCLVFGT 90 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~~~lg~~---~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Gr~~~~~~~~~ 90 (478)
+.+.-+.+..++-.+.|+.+. -+++.+.++ +.....+-...-. ++.+..++-+++.++ .-|.+++.....
T Consensus 27 ~kflpl~Ll~f~I~~ny~~lR-----~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~-lt~~~vF~~~~~ 100 (509)
T COG3202 27 KKFLPLALLFFCILFNYNLLR-----SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNI-LTREKVFYIILG 100 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhh-cCHHHHHHHHHH
Confidence 334445555556555554222 234555444 4445555555555 577788888999999 899999888777
Q ss_pred HHHHHHHHHHHHhh--cccCCCC-CC-------CCCc------cccchhHHHHHHHHHHHH-hccccccccccccccCCC
Q 011743 91 LEVLSLVMLTIQAY--SKSLHPP-DC-------GKSS------CLKGAIAAYFYGSLYLYS-LGCGGNRGTLPALGAGQF 153 (478)
Q Consensus 91 ~~~i~~~~~~~~~~--~~~~~~~-~~-------~~~~------~~~~~~~~~~~~~~~l~g-ig~g~~~~~~~~~i~~~~ 153 (478)
.+..-+++++..-. -+.++|. ++ +..+ .-..++...+++.-=+.| +-.. --...+.-|..
T Consensus 101 ~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S---~lFw~faNeit 177 (509)
T COG3202 101 FFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLS---LLFWQFANEIT 177 (509)
T ss_pred HHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHH---HHHHHHHHHhh
Confidence 77766666654321 1122322 11 0000 000012223332222221 1101 01234455666
Q ss_pred CCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 011743 154 DENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI 191 (478)
Q Consensus 154 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 191 (478)
+.++ -.|.+++++...|++..++..+..++.+
T Consensus 178 t~~e------akRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 178 TIEE------AKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred hHHH------hhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 6555 5789999999999999999998888876
No 284
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=59.84 E-value=68 Score=32.95 Aligned_cols=90 Identities=7% Similarity=-0.079 Sum_probs=59.2
Q ss_pred chhhHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHH
Q 011743 49 DIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFY 128 (478)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (478)
...-.|.+-.+..+.+.++.+..|++..+ +.+-.-+.++..-..-+.+++..+. ..+.+..+
T Consensus 283 ~~vYNG~VeA~~tllgA~~al~~g~v~~~-w~~~~~l~l~~~S~l~a~~L~lm~~-----------------t~~Iwv~Y 344 (412)
T PF01770_consen 283 ESVYNGAVEAASTLLGAIAALLAGYVKVN-WDRWGELALGVFSLLQAGLLFLMSF-----------------TGNIWVCY 344 (412)
T ss_pred CcccchHHHHHHHHHHHHHHHHHhHhhcc-hHHHHHHHHHHHHHHHHHHHHHHHH-----------------hhHHHHHH
Confidence 34456889999999999999999999777 7776666655554443333333332 23788888
Q ss_pred HHHHHHHhccccccccccccccCCCCCC
Q 011743 129 GSLYLYSLGCGGNRGTLPALGAGQFDEN 156 (478)
Q Consensus 129 ~~~~l~gig~g~~~~~~~~~i~~~~~~~ 156 (478)
++-++.+...-...+....=++.-..++
T Consensus 345 ~~yIif~~~y~fliTiA~~qIA~~l~~e 372 (412)
T PF01770_consen 345 AGYIIFRSLYMFLITIASFQIAKNLSEE 372 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 8877776666665555555555544433
No 285
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=54.74 E-value=2.6e+02 Score=28.72 Aligned_cols=46 Identities=13% Similarity=0.206 Sum_probs=35.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHH
Q 011743 427 SLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCH 472 (478)
Q Consensus 427 ~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~ 472 (478)
+-+|.+....++|+..+=...-.+.++.+..|++++-.+..+....
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~f 387 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFF 387 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHH
Confidence 4577778888999999999999999999999887776654444433
No 286
>KOG2082 consensus K+/Cl- cotransporter KCC1 and related transporters [Inorganic ion transport and metabolism]
Probab=53.65 E-value=1e+02 Score=34.04 Aligned_cols=85 Identities=14% Similarity=0.075 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh------------cccCCCCCCCCCccccchhHHHHHHHHHHHHhcccccccccccccc
Q 011743 83 ATCLVFGTLEVLSLVMLTIQAY------------SKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGA 150 (478)
Q Consensus 83 ~~~~~~~~~~~i~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~i~ 150 (478)
.++.+|.++.+.|..+..+... .|.+.++.+++.| ++..+.+++-.++ +..++.-...
T Consensus 497 wVi~IGsFlST~GAgLQsLtgAPRLLQAIAkD~IiPfL~~F~~~~~n---gEPt~aLlLT~~I---ce~gILigsl---- 566 (1075)
T KOG2082|consen 497 WVIVIGSFLSTCGAGLQSLTGAPRLLQAIAKDDIIPFLAPFGHGKAN---GEPTWALLLTAII---CECGILIGSL---- 566 (1075)
T ss_pred eeeehhHHHHHhHHHHhhhcCcHHHHHHHhhcCccchhhhhccccCC---CCccHHHHHHHHH---HHhhheeech----
Confidence 4788999999998887765432 2556666666553 2233333222222 1111111111
Q ss_pred CCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 011743 151 GQFDENDPKGAKALASYFNFYLFATTLAAMIGVT 184 (478)
Q Consensus 151 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~ 184 (478)
|... | -....|-++|.+.|+..++-..
T Consensus 567 D~iA---p----ilsmFFLMCY~fVNLaCavqtL 593 (1075)
T KOG2082|consen 567 DLIA---P----ILSMFFLMCYLFVNLACAVQTL 593 (1075)
T ss_pred hHHH---H----HHHHHHHHHHHHHhHHHHHHHH
Confidence 2211 1 1567777788888888775443
No 287
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=50.75 E-value=4 Score=40.17 Aligned_cols=118 Identities=9% Similarity=-0.012 Sum_probs=3.6
Q ss_pred HHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHH
Q 011743 56 TLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYS 135 (478)
Q Consensus 56 ~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 135 (478)
...+|.++..++..+.++.-=+ --++|.+.+..+.-.+-..++..+..-|. ++..... -.+.+..++..++.|
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~cn~~p~----~~~~~~~--~~~d~~~~i~~~l~g 259 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWP-GPSPRWLWILSLLRFLFIPLFLLCNVQPR----PRYLPVL--FNSDAWFIILMLLFG 259 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEec-ccccccHHHHHHHHHHHHHHHHHHHhhcc----cccCCCc--ccchHHHHHHHHHHH
Confidence 4567888888888888774211 11344444444444443433333321110 0000000 114566777788999
Q ss_pred hccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 011743 136 LGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAI 186 (478)
Q Consensus 136 ig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~ 186 (478)
+..|-.......+..+..++++ |..+-.+.....++|-.+|..++
T Consensus 260 ~TNGyl~tl~m~~~p~~v~~~e------~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 260 FTNGYLSTLAMMYAPKSVSPEE------RELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp -------HHHH----------------------------------------
T ss_pred HccchhhhceeeeCCCcCCHHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988666 66666666667777777665543
No 288
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=50.34 E-value=40 Score=33.89 Aligned_cols=80 Identities=5% Similarity=0.063 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHH---HHH
Q 011743 391 QRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTL---LLH 467 (478)
Q Consensus 391 ~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~---~~g 467 (478)
+-+.+|.++..+|.+++...... ...+ ...+...+...+.++++|.++.-|....+..++.+++.+.+ +-.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~----~~~~--~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~ 75 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIP----PSLP--SGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFN 75 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTS----SSC--------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhc----chhh--hhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHH
Confidence 34788888899998886665211 0000 11345667788889999999999999999999998774333 333
Q ss_pred HHHHHhhcc
Q 011743 468 LHFCHCHLA 476 (478)
Q Consensus 468 ~~~~~~~lg 476 (478)
.+....++|
T Consensus 76 ~fY~~in~G 84 (372)
T PF00854_consen 76 WFYWGINIG 84 (372)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhhh
Confidence 344444443
No 289
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=49.69 E-value=89 Score=28.78 Aligned_cols=45 Identities=16% Similarity=-0.001 Sum_probs=36.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCc-chhHHHHHHHHH
Q 011743 427 SLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPA-GMRTLLLHLHFC 471 (478)
Q Consensus 427 ~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~-~~~g~~~g~~~~ 471 (478)
+.+.+....+..+++.+...|....++.+..|+ +.|+...+....
T Consensus 93 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (338)
T COG0477 93 GLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTL 138 (338)
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 355566666668999999999999999999998 678887777666
No 290
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=49.38 E-value=3.2e+02 Score=28.31 Aligned_cols=50 Identities=8% Similarity=0.016 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhhhhhhccCCcchhHHHHHHHHHHhhcc
Q 011743 427 SLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLA 476 (478)
Q Consensus 427 ~~~~l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~~~~~lg 476 (478)
+-++.++..++.|+..+.+....+.+..+.+++++|-.+..+..++-.+|
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~G 420 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVG 420 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 44556666899999999999999999999999888888777766665544
No 291
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=48.83 E-value=21 Score=34.19 Aligned_cols=64 Identities=9% Similarity=0.008 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHhHHHHHHHcccccCCchhhHhHHHHHHHHHHHHHhhHHHHH---------hhhccchhHHHH
Q 011743 21 FVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFI---------SDTYLSRFATCL 86 (478)
Q Consensus 21 ~~~~~~~~~~~~~v~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~l---------aDr~~Gr~~~~~ 86 (478)
-..-+.+-...-.-.+++..|++ +.|.++....+++.+.++...+..++.|.. -|| +|||+...
T Consensus 23 GvGHmlNDitAScWFTYlllflt-qiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr-~G~~~~wh 95 (412)
T KOG4830|consen 23 GVGHMLNDITASCWFTYLLLFLT-QIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDR-IGRRMSWH 95 (412)
T ss_pred chhHHHhhHHHHHHHHHHHHHHH-HhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhh-hcceeeee
Confidence 34455666665666678888877 567888888899999999999999999744 578 89988643
No 292
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=48.24 E-value=3e+02 Score=27.65 Aligned_cols=164 Identities=14% Similarity=0.018 Sum_probs=85.2
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHcc---cccCCchhhHhHHHHHHH-HHHHHHhhHHH----HHhhhcc--chhHH
Q 011743 15 RACTFVFVLSALENMGFIANGISMVLYFK---NEMHFDIAGASNTLTNFF-GSTFLLCLVGG----FISDTYL--SRFAT 84 (478)
Q Consensus 15 ~~~~~l~~~~~~~~~~~~~v~~~l~~yl~---~~lg~~~~~~~~~~~~~~-~~~~~~~~~~G----~laDr~~--Gr~~~ 84 (478)
+...++++.+.+...+.-.+..-.=.++. ++.|++....+.+..... ..+.+..+.+| +++|+ . |++--
T Consensus 119 ~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~-~~~g~vaP 197 (354)
T PF05631_consen 119 SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADW-FGFGPVAP 197 (354)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHH-hCCCCcch
Confidence 34555666666666665544442222332 346777776555554333 33444444444 55555 4 45666
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCC----ccccchh-HHHHHHH---HHHHHhccccccccccccccCCCCCC
Q 011743 85 CLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKS----SCLKGAI-AAYFYGS---LYLYSLGCGGNRGTLPALGAGQFDEN 156 (478)
Q Consensus 85 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~---~~l~gig~g~~~~~~~~~i~~~~~~~ 156 (478)
...+..+.+++.++..... . +| +|.+ ...+... -...+.. ..++|+..+.+..+.+.++--|.|.-
T Consensus 198 F~~a~~~l~~~~~~I~~~W---~--EN-yg~~~~~~~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL 271 (354)
T PF05631_consen 198 FDAAIVLLAVAAVLILKTW---P--EN-YGDTSSSSSLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPAL 271 (354)
T ss_pred HHHHHHHHHHHHHHHHhcc---c--cc-CCCcccccchHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeecee
Confidence 7777777777665543221 1 22 2221 1001000 0111111 23467777777778888877777765
Q ss_pred Chh-hhhhhhhHHHHHHHHHHHHHHHHHHH
Q 011743 157 DPK-GAKALASYFNFYLFATTLAAMIGVTA 185 (478)
Q Consensus 157 ~~~-~~~~r~~~~~~~~~~~~~g~~~~p~i 185 (478)
+++ ++..-|..|+-+..+.-+|..+-+.+
T Consensus 272 ~~~~~~~P~GlIFssFM~a~MlGS~lf~~l 301 (354)
T PF05631_consen 272 DPDDEELPLGLIFSSFMVAMMLGSSLFSRL 301 (354)
T ss_pred cCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 432 12235677777777777777766543
No 293
>PRK07331 cobalt transport protein CbiM; Provisional
Probab=47.64 E-value=2.1e+02 Score=28.41 Aligned_cols=101 Identities=13% Similarity=0.158 Sum_probs=58.2
Q ss_pred CchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-----ccCCCC---cc--
Q 011743 356 VLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNA-----FNQSPP---KQ-- 425 (478)
Q Consensus 356 ~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---~~-- 425 (478)
..|.+.+.+..++..+.+++..+|... +.......+++...++....+......... .+++|. .+
T Consensus 107 GaN~l~ma~~~~~v~y~iyr~~~~~~~-----~~~~~~~~~f~gg~l~i~~~al~~al~l~~~~~~~~~~~g~~~~~~~~ 181 (322)
T PRK07331 107 GANCFNMAFIMPFVGYYIYKFIKKWTK-----SKKGEYIGAFIGGYIGINVAALFAAIEFGLQPLLFKDASGLPLYSPYP 181 (322)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcc-----chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCccccccch
Confidence 346676666677788888887776421 223344445555555655555443322211 112221 11
Q ss_pred --chHHHHHHHHHHH-HHHHHhhhhhhhhhhhccCCcch
Q 011743 426 --ISLFWLSFQYCIF-GIADMFTFVGLLEFFYKEAPAGM 461 (478)
Q Consensus 426 --~~~~~l~~~~~l~-g~ge~~~~p~~~~~~~~~aP~~~ 461 (478)
.....+....... ++.|+.+......++.+.-|+-.
T Consensus 182 ~~~~~~~m~~~hl~i~gi~Eg~iT~~v~~~l~~~~p~ll 220 (322)
T PRK07331 182 LSVTIPAMLLPHLLVAGILEGIFTALVFSFIKRVSPGIL 220 (322)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHh
Confidence 1222244455555 99999999999999998887654
No 294
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=47.51 E-value=85 Score=21.86 Aligned_cols=35 Identities=14% Similarity=0.167 Sum_probs=23.1
Q ss_pred HHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHH
Q 011743 59 NFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (478)
Q Consensus 59 ~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~ 93 (478)
.......+.....|+..|+++|.++...+...+..
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG 42 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLG 42 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 34455566667889999998998665555444433
No 295
>PRK08319 cobalt transport protein CbiM; Validated
Probab=42.34 E-value=2.6e+02 Score=26.06 Aligned_cols=100 Identities=13% Similarity=0.058 Sum_probs=53.3
Q ss_pred CchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhH-HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHH----
Q 011743 356 VLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQ-RVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFW---- 430 (478)
Q Consensus 356 ~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~-~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 430 (478)
..|.+.+.+......+..++..+|... ++.. ....|++...++.......-.. .....++.......+
T Consensus 109 G~N~l~m~~~~~~~~y~~~~~~~~~~~-----~~fv~~f~~gf~~~~l~~~~~~l~l~l--~~~~~~~~~~~~~~~~~~~ 181 (224)
T PRK08319 109 GANVFSMAIVGPFVGYLVYKLLRKAGL-----NLAVAVFLAAFLADLATYVVTSVQLAL--AFPDPVGGFMASFAKFAGI 181 (224)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHhhcCc-----chHHHHHHHHHHHHHHHHHHHHHHHHH--hcccccchHHHHHHHHHHH
Confidence 346777777777888888887777322 2222 2233444333333333322111 000000000011112
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhccCCcchh
Q 011743 431 LSFQYCIFGIADMFTFVGLLEFFYKEAPAGMR 462 (478)
Q Consensus 431 l~~~~~l~g~ge~~~~p~~~~~~~~~aP~~~~ 462 (478)
.......+++.|+++.....++..+.-|+=.+
T Consensus 182 ~~~~~l~l~~~Eg~itg~~v~~l~~~rP~~l~ 213 (224)
T PRK08319 182 FAVTQIPLAIAEGLLTVLIFNYLTKYRPDLLV 213 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHh
Confidence 23445668999999999999999988776543
No 296
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=40.45 E-value=2.3e+02 Score=31.49 Aligned_cols=48 Identities=13% Similarity=0.028 Sum_probs=34.8
Q ss_pred hhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhccccc
Q 011743 76 DTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGN 141 (478)
Q Consensus 76 Dr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~ 141 (478)
|++-||.|-++++.++++++++...+.. ...+.+.+++++.+++.++.
T Consensus 51 ~~~~~R~~~l~it~~~f~i~sl~v~ll~------------------~~p~~~~~~l~~~tf~~~ml 98 (701)
T TIGR01667 51 DRLTGRLKNLIITLSCFSIASFLVQLLF------------------PKPWLFPFLLTLLTFGFILL 98 (701)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHh------------------cchHHHHHHHHHHHHHHHHH
Confidence 4556778899999999998888777654 25666777777777766553
No 297
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=36.06 E-value=2.6e+02 Score=31.07 Aligned_cols=49 Identities=10% Similarity=-0.017 Sum_probs=34.5
Q ss_pred hhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHHHHHHhcccccc
Q 011743 76 DTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNR 142 (478)
Q Consensus 76 Dr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~ 142 (478)
|++-||.|-+.++.+.++++++...+.. ..++.+..++++.+++.++..
T Consensus 51 ~~~~~R~~~l~~t~~~f~i~sl~v~ll~------------------~~p~lf~~~l~~~tf~~~mlg 99 (704)
T TIGR01666 51 DRLTGRLKNVIFTLICFSIASFSVELLF------------------GKPWLFAVGLTVSTFGFIMLG 99 (704)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHh------------------cCcHHHHHHHHHHHHHHHHHH
Confidence 4556778888888888888887766553 256677777777777665543
No 298
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=33.35 E-value=2.4e+02 Score=28.56 Aligned_cols=98 Identities=10% Similarity=0.020 Sum_probs=65.0
Q ss_pred hHhHHHHHHHHHHHHHhhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCccccchhHHHHHHHH
Q 011743 52 GASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSL 131 (478)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (478)
-.|..-.+..+.++++.+..|++--. |.|..-+.++..-...+..++..+. +.+.+..+++-
T Consensus 272 yNG~veAv~tlLGa~~~~~~g~l~i~-w~r~g~~ll~~~s~~~agllf~m~~-----------------t~~Iw~~Ya~y 333 (433)
T KOG3810|consen 272 YNGAVEAVSTLLGAIAALAAGYLNIN-WNRWGDLLLAVGSAVQAGLLFIMAQ-----------------TQHIWVCYAGY 333 (433)
T ss_pred hcCHHHHHHHHHHHHHHHHHHheeec-cchhhHHHHHHHHHHhhhhhhhhhc-----------------ccceehhhhhH
Confidence 34788888899999999999999877 6776555544443333333333333 33677788888
Q ss_pred HHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHH
Q 011743 132 YLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (478)
Q Consensus 132 ~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~ 173 (478)
++...-.....+....-+++-...+. -+-.||.+..
T Consensus 334 vlfr~~y~l~itiA~~~iA~nL~~e~------~gLvFGiNTF 369 (433)
T KOG3810|consen 334 VLFRVIYQLTITIATFQIARNLSSEL------FGLVFGINTF 369 (433)
T ss_pred HHHHhhHhhhhhHHHHHHHHhhhhhh------heeeeehHHH
Confidence 88777777777766666666655444 5666666544
No 299
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=33.23 E-value=2.6e+02 Score=29.69 Aligned_cols=63 Identities=13% Similarity=-0.055 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 011743 124 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID 192 (478)
Q Consensus 124 ~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~ 192 (478)
+..+++.-.+..+..-.++.++.|+-++..+|.- =|+.|++.+...|+|+.....+.-++.+.
T Consensus 405 f~lvI~~~~l~sf~stvmFVai~AFharISDP~I------GGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 405 FLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAI------GGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccc------chHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 3444455555666667777888899999988877 68999999999999988766665555554
No 300
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=32.63 E-value=3.4e+02 Score=26.05 Aligned_cols=44 Identities=20% Similarity=0.273 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHH
Q 011743 123 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF 170 (478)
Q Consensus 123 ~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~ 170 (478)
+...+++.-++.|+..-++++..-- +...+++.+|+ +.+..+|+
T Consensus 203 ~~~~f~I~~Fl~G~f~WgiQ~ViL~-lPhEyK~~~pk---~ig~~Fg~ 246 (267)
T PF07672_consen 203 GFAFFYIFGFLAGFFLWGIQGVILN-LPHEYKGYNPK---KIGIQFGL 246 (267)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHhc-ChhhhcCCCcc---eehhHHHH
Confidence 4666777788888877777765543 33444444433 13444444
No 301
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=31.92 E-value=6.4e+02 Score=26.66 Aligned_cols=72 Identities=13% Similarity=0.160 Sum_probs=47.9
Q ss_pred HHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 011743 134 YSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGL 210 (478)
Q Consensus 134 ~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~f~i~~~~~~~~~ 210 (478)
.++..-.....-...+.+++|++++ +...+|-+....++-..+-..+++.+.+..||...-.+.-+++++..
T Consensus 292 Ygi~inLvE~~wK~~lk~~~~~~~~-----ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit~ 363 (491)
T PF03219_consen 292 YGISINLVEVVWKSQLKQLYPDPND-----YSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILITG 363 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCchH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHH
Confidence 4455555555666777888887642 56677776666666555555777888888999988777655544433
No 302
>PRK11909 cobalt transport protein CbiM; Provisional
Probab=30.31 E-value=4.6e+02 Score=24.55 Aligned_cols=36 Identities=11% Similarity=0.097 Sum_probs=27.1
Q ss_pred HHHHHHHHHHH-HHHHHhhhhhhhhhhhccCCcchhH
Q 011743 428 LFWLSFQYCIF-GIADMFTFVGLLEFFYKEAPAGMRT 463 (478)
Q Consensus 428 ~~~l~~~~~l~-g~ge~~~~p~~~~~~~~~aP~~~~g 463 (478)
...+....+.. ++.|+.+......++.+.-|++.-+
T Consensus 183 ~~~~~~~h~~i~~i~Eg~iT~~~~~~l~~~~~~~~l~ 219 (230)
T PRK11909 183 IPAMLFAHLTVAGIVEAIVTGLVVYYLQKADEENLLY 219 (230)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHhc
Confidence 34455566776 9999999999999998885655543
No 303
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=27.29 E-value=2e+02 Score=23.08 Aligned_cols=29 Identities=14% Similarity=-0.051 Sum_probs=17.1
Q ss_pred HHHHHHhhHHHHHhhhccchhHHHHHHHH
Q 011743 62 GSTFLLCLVGGFISDTYLSRFATCLVFGT 90 (478)
Q Consensus 62 ~~~~~~~~~~G~laDr~~Gr~~~~~~~~~ 90 (478)
++..+...+.|..-|+++|-...+.+.++
T Consensus 53 v~pil~G~~lG~WLD~~~~t~~~~tl~~l 81 (100)
T TIGR02230 53 AIPTLLGVAVGIWLDRHYPSPFSWTLTML 81 (100)
T ss_pred HHHHHHHHHHHHHHHhhcCCCcHHHHHHH
Confidence 33444455667777887887664444433
No 304
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=25.57 E-value=2.4e+02 Score=28.92 Aligned_cols=59 Identities=10% Similarity=-0.133 Sum_probs=43.8
Q ss_pred HHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccchhHH
Q 011743 133 LYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWL 197 (478)
Q Consensus 133 l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~ 197 (478)
+.+...-.+..+..++.++..|+.- -++.|++.....|+|+-.-..+..++.+..+++-
T Consensus 378 ~~~~~~ts~fv~~maf~aqisdp~i------ggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~~ 436 (510)
T KOG3574|consen 378 FHQVFVTSMFVSGMAFHAQISDPAI------GGTYMTLLNTLSNLGGNWPGTVALWLADGLTVKQ 436 (510)
T ss_pred HhhhHHHHHHHHHHHHHhhcCCccc------CccHHHHHHHHHHhcCCcHHHHHHHhcccCceee
Confidence 3333334445667788888888776 7899999999999999888888888877665543
No 305
>PF12832 MFS_1_like: MFS_1 like family
Probab=24.67 E-value=1.2e+02 Score=22.78 Aligned_cols=30 Identities=17% Similarity=0.340 Sum_probs=22.5
Q ss_pred CCCCccCchhHHHHHHHHhhhhHHHHHhhh
Q 011743 350 PTPSIPVLPLLFMAILIPIYEFLFVPFARK 379 (478)
Q Consensus 350 ~~~~~~~~~~l~~i~~~~~~~~~~~~l~~r 379 (478)
..+.+..+.++..++..|+.+.+.|+..++
T Consensus 36 ~iGil~~i~~~~~~~~~pl~g~laDk~~~~ 65 (77)
T PF12832_consen 36 QIGILSAIRPLIRFLAPPLWGFLADKFGKR 65 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 456677778888889999988877765444
No 306
>PRK06265 cobalt transport protein CbiM; Validated
Probab=23.77 E-value=5.6e+02 Score=23.29 Aligned_cols=97 Identities=12% Similarity=0.078 Sum_probs=51.5
Q ss_pred CchhHHHHHHHHhhhhHHHHHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHH
Q 011743 356 VLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQY 435 (478)
Q Consensus 356 ~~~~l~~i~~~~~~~~~~~~l~~r~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 435 (478)
..|.+.+.+..++.....++..||.+ +.....+++...++...............+..+ ............
T Consensus 101 G~N~l~m~~p~~~~~~~~~~~~~~~~--------~~~~~~~f~~~~l~v~~~~l~~~~~l~l~~~~~-~~~~~~~~~~~~ 171 (199)
T PRK06265 101 GVNTLNMALPAVLAGYLFRKLLRRTP--------PPRGLAAFLAGALAVFLAALLCALELALSGGFP-FVPAAKLLGLAH 171 (199)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc--------chHHHHHHHHHHHHHHHHHHHHHHHHHHccccc-HHHHHHHHHHHH
Confidence 34666666666677776666655531 234455555555555544443222111111000 001112232444
Q ss_pred HHHHHHHHhhhhhhhhhhhccCCcch
Q 011743 436 CIFGIADMFTFVGLLEFFYKEAPAGM 461 (478)
Q Consensus 436 ~l~g~ge~~~~p~~~~~~~~~aP~~~ 461 (478)
...++.|+++.....++..+.-|+-.
T Consensus 172 ~~l~~~Eg~ltg~~v~~l~~~rP~~l 197 (199)
T PRK06265 172 LPLMVIEGIITAFAVSFLARVRPELL 197 (199)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHhc
Confidence 55666699999999999888877643
No 307
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=23.30 E-value=6.7e+02 Score=24.09 Aligned_cols=54 Identities=15% Similarity=0.142 Sum_probs=33.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhc-------cchhHHHHHHHHHHHHHHHHHHHhcCcc
Q 011743 164 LASYFNFYLFATTLAAMIGVTAIVYVFI-------DQGWWLGFLISSVATLIGLIALAIGKPF 219 (478)
Q Consensus 164 r~~~~~~~~~~~~~g~~~~p~i~~~l~~-------~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 219 (478)
|+.......++-++|+.+.-+. ++.. ...|++.+.+.+++.++-+++..+..++
T Consensus 4 K~~~s~~n~~gf~iG~ii~~ip--F~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~ 64 (267)
T PF07672_consen 4 KSILSQFNPWGFNIGTIIVNIP--FLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKN 64 (267)
T ss_pred cceeeeeccccchhhHHHHHhh--HHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 5566666667778888765432 2221 2359999988887776666665554443
No 308
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=22.00 E-value=1.4e+02 Score=32.24 Aligned_cols=63 Identities=10% Similarity=-0.051 Sum_probs=55.0
Q ss_pred hhHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 011743 122 AIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF 190 (478)
Q Consensus 122 ~~~~~~~~~~~l~gig~g~~~~~~~~~i~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~ 190 (478)
-+..+.+.-.+++|++..+......-+.=+++|++- |..+.+++.....+|..+...+...+.
T Consensus 456 mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sM------kS~~~al~l~t~a~G~~lss~Lv~~v~ 518 (571)
T KOG1237|consen 456 MSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESM------KSVATALWLLTVAVGNYLSSVLVSLVQ 518 (571)
T ss_pred eeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 477888888999999999999999889999999887 899999999999999999988876553
Done!