BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011744
(478 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81742|APBLC_ARATH Beta-adaptin-like protein C OS=Arabidopsis thaliana GN=BETAC-AD
PE=1 SV=2
Length = 893
Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/470 (95%), Positives = 461/470 (98%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP
Sbjct: 43 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 102
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLCDPLQ+CLKDDDPYVRKTAAICVAKL+DINAELVEDRG
Sbjct: 103 LIRALAVRTMGCIRVDKITEYLCDPLQKCLKDDDPYVRKTAAICVAKLFDINAELVEDRG 162
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
FLE+LKDLISDNNPMVVANAVAALAEI+ENS+ PIFEI S L+KLLTALNECTEWGQVF
Sbjct: 163 FLEALKDLISDNNPMVVANAVAALAEIQENSTSPIFEINSTILTKLLTALNECTEWGQVF 222
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCK 240
ILDALSRYKA+D REAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDV+RNLCK
Sbjct: 223 ILDALSRYKASDPREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVIRNLCK 282
Query: 241 KMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIM 300
KMAPPLVTLLSAEPEIQYVALRNINLIVQ+RPTILAHEIKVFFCKYNDPIYVKMEKLEIM
Sbjct: 283 KMAPPLVTLLSAEPEIQYVALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIM 342
Query: 301 IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK 360
IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK
Sbjct: 343 IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK 402
Query: 361 VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA 420
VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA
Sbjct: 403 VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA 462
Query: 421 DELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVTLKYYT 470
DELLESFLE+FPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQV L T
Sbjct: 463 DELLESFLENFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNAT 512
>sp|Q9SUS3|APBLB_ARATH Beta-adaptin-like protein B OS=Arabidopsis thaliana GN=BETAB-AD
PE=1 SV=1
Length = 894
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/470 (96%), Positives = 462/470 (98%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP
Sbjct: 43 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 102
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLCDPLQ+CLKDDDPYVRKTAAICVAKL+DINAELVEDRG
Sbjct: 103 LIRALAVRTMGCIRVDKITEYLCDPLQKCLKDDDPYVRKTAAICVAKLFDINAELVEDRG 162
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
FLE+LKDLISDNNPMVVANAVAALAEI+ENSS PIFEI S TL+KLLTALNECTEWGQVF
Sbjct: 163 FLEALKDLISDNNPMVVANAVAALAEIQENSSSPIFEINSTTLTKLLTALNECTEWGQVF 222
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCK 240
ILDALS+YKAAD REAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDV+RNLCK
Sbjct: 223 ILDALSKYKAADPREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVIRNLCK 282
Query: 241 KMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIM 300
KMAPPLVTLLSAEPEIQYVALRNINLIVQ+RPTILAHEIKVFFCKYNDPIYVKMEKLEIM
Sbjct: 283 KMAPPLVTLLSAEPEIQYVALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIM 342
Query: 301 IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK 360
IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK
Sbjct: 343 IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK 402
Query: 361 VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA 420
VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA
Sbjct: 403 VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA 462
Query: 421 DELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVTLKYYT 470
DELLESFLE+FPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQV L T
Sbjct: 463 DELLESFLENFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNAT 512
>sp|Q10567|AP1B1_HUMAN AP-1 complex subunit beta-1 OS=Homo sapiens GN=AP1B1 PE=1 SV=2
Length = 949
Score = 739 bits (1908), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/472 (76%), Positives = 420/472 (88%), Gaps = 3/472 (0%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +DPNP
Sbjct: 41 MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA+LVED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEI-EENSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL++LKDLISD+NPMVVANAVAAL+EI E + S + ++ +++KLLTALNECTEWGQ+
Sbjct: 161 FLDTLKDLISDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITST-DVVRNL 238
FILD L+ Y D REA++I ERVTPRL HAN AVVLSAVK++++ ME+++ D L
Sbjct: 221 FILDCLANYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTL 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLSAEPE+QYVALRNINLIVQ+RP IL HE+KVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VIKDIFR+YPN YES+IATLCE+LD+LDEPEA+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERID 460
Query: 419 NADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVTLKYYT 470
NADELLESFLE F +E QVQLQLLTA VKLFLKKPTE Q+++Q L T
Sbjct: 461 NADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTET-QELVQQVLSLAT 511
>sp|O35643|AP1B1_MOUSE AP-1 complex subunit beta-1 OS=Mus musculus GN=Ap1b1 PE=1 SV=2
Length = 943
Score = 738 bits (1906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/472 (76%), Positives = 420/472 (88%), Gaps = 3/472 (0%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +DPNP
Sbjct: 41 MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA+LVED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEI-EENSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL++LKDLISD+NPMVVANAVAAL+EI E + S + ++ +++KLLTALNECTEWGQ+
Sbjct: 161 FLDTLKDLISDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITST-DVVRNL 238
FILD L+ Y D REA++I ERVTPRL HAN AVVLSAVK++++ ME+++ D L
Sbjct: 221 FILDCLANYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYATL 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLSAEPE+QYVALRNINLIVQ+RP IL HE+KVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VIKDIFR+YPN YES+IATLCE+LD+LDEPEA+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERID 460
Query: 419 NADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVTLKYYT 470
NADELLESFLE F +E QVQLQLLTA VKLFLKKPTE Q+++Q L T
Sbjct: 461 NADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTET-QELVQQVLSLAT 511
>sp|P52303|AP1B1_RAT AP-1 complex subunit beta-1 OS=Rattus norvegicus GN=Ap1b1 PE=1 SV=1
Length = 949
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/472 (75%), Positives = 416/472 (88%), Gaps = 3/472 (0%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +DPNP
Sbjct: 41 MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA+LVED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEI-EENSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL++LKDLISD+NPMVVAN VAAL+EI E + S + ++ + +++KLLTALNECTEW Q+
Sbjct: 161 FLDTLKDLISDSNPMVVANRVAALSEIAESHPSSNLLDLKAQSINKLLTALNECTEWAQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITST-DVVRNL 238
FILD L Y D REA++I ERVTPRL HAN AVVLSAVK++++ ME+++ D L
Sbjct: 221 FILDCLGNYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYATL 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLSAEPE QYV LRNINLIVQ+RP IL HE+KVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSAEPEPQYVPLRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VIKDIFR+YPN YES+IATLCE+LD+LDEPEA+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERID 460
Query: 419 NADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVTLKYYT 470
NADELLESFL+ F +E QVQLQLLTA VKLFLKKPTE Q+++Q L T
Sbjct: 461 NADELLESFLDGFHDESTQVQLQLLTAIVKLFLKKPTET-QELVQQVLSLAT 511
>sp|Q54X82|AP1B_DICDI AP-1 complex subunit beta OS=Dictyostelium discoideum GN=ap1b1 PE=3
SV=1
Length = 942
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/470 (74%), Positives = 407/470 (86%), Gaps = 1/470 (0%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS LFT V+NCMQT NLELKKLVYLY++NYAK+ PD AILAVNTF KD+ DPNP
Sbjct: 41 MTVGKDVSMLFTHVLNCMQTHNLELKKLVYLYVMNYAKNHPDRAILAVNTFQKDASDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVD ITE+LC+PL+ LKD DPYVRKTAA+CVAKLYD+N ELVE++G
Sbjct: 101 LIRALAVRTMGCIRVDNITEHLCEPLRHALKDQDPYVRKTAAVCVAKLYDVNPELVENQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
FL L DL+ D+NPMVVANAVA+L EI+E S + +F I S L+KLL ALNECTEWGQVF
Sbjct: 161 FLNILNDLLGDSNPMVVANAVASLTEIDEVSKKEVFRIHSGNLNKLLAALNECTEWGQVF 220
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCK 240
IL++L +Y D++EAEN+ ERV PRLQHAN AVVLSAVK++++ M I + DV+R CK
Sbjct: 221 ILNSLCKYTPRDSQEAENVCERVAPRLQHANSAVVLSAVKVLMKYMNSIGNNDVIRLFCK 280
Query: 241 KMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIM 300
KMAPPLVTLLS EPEIQ++ LRNINLIVQ+RP IL +E+KVFFCKYNDPIYVKMEKLEIM
Sbjct: 281 KMAPPLVTLLSKEPEIQFLGLRNINLIVQKRPEILQYEMKVFFCKYNDPIYVKMEKLEIM 340
Query: 301 IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK 360
I LA+++NI++VLLEFKEYATE+DV+FVRKAVRAIGRCAIK++RA+ERCI VLL+LI+ K
Sbjct: 341 IMLANEKNIEEVLLEFKEYATEIDVEFVRKAVRAIGRCAIKIDRASERCIQVLLDLIQTK 400
Query: 361 VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA 420
VNYVVQEAIIVIKDIFR+YPN YE IIATLC +L++LDEPEAKASMIWIIGEYAERIDNA
Sbjct: 401 VNYVVQEAIIVIKDIFRKYPNKYEGIIATLCANLESLDEPEAKASMIWIIGEYAERIDNA 460
Query: 421 DELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVTLKYYT 470
ELL SFLE F +E +QVQLQLLT+ VKLFLK+P + QQM+Q L T
Sbjct: 461 HELLNSFLEGFKDENSQVQLQLLTSIVKLFLKRPKDA-QQMVQTVLNLST 509
>sp|Q08DS7|AP1B1_BOVIN AP-1 complex subunit beta-1 OS=Bos taurus GN=AP2B1 PE=2 SV=1
Length = 951
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/472 (74%), Positives = 416/472 (88%), Gaps = 3/472 (0%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEE-NSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D+NPMVVANAVAAL+EI E + + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITS-TDVVRNL 238
FILD LS Y D REA++I ERVTPRL HAN AVVLSAVK++++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKESDYYNML 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 419 NADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVTLKYYT 470
NADELLESFLE F +E QVQL LLTA VKLFLKKP+E Q+++Q L T
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSET-QELVQQVLSLAT 511
>sp|P63009|AP2B1_BOVIN AP-2 complex subunit beta OS=Bos taurus GN=AP2B1 PE=1 SV=2
Length = 937
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/472 (74%), Positives = 416/472 (88%), Gaps = 3/472 (0%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEE-NSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D+NPMVVANAVAAL+EI E + + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITS-TDVVRNL 238
FILD LS Y D REA++I ERVTPRL HAN AVVLSAVK++++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKESDYYNML 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 419 NADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVTLKYYT 470
NADELLESFLE F +E QVQL LLTA VKLFLKKP+E Q+++Q L T
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSET-QELVQQVLSLAT 511
>sp|P62944|AP2B1_RAT AP-2 complex subunit beta OS=Rattus norvegicus GN=Ap2b1 PE=1 SV=1
Length = 937
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/472 (74%), Positives = 416/472 (88%), Gaps = 3/472 (0%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEE-NSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D+NPMVVANAVAAL+EI E + + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELIT-STDVVRNL 238
FILD LS Y D REA++I ERVTPRL HAN AVVLSAVK++++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNML 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 419 NADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVTLKYYT 470
NADELLESFLE F +E QVQL LLTA VKLFLKKP+E Q+++Q L T
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSET-QELVQQVLSLAT 511
>sp|P63010|AP2B1_HUMAN AP-2 complex subunit beta OS=Homo sapiens GN=AP2B1 PE=1 SV=1
Length = 937
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/472 (74%), Positives = 416/472 (88%), Gaps = 3/472 (0%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEE-NSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D+NPMVVANAVAAL+EI E + + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELIT-STDVVRNL 238
FILD LS Y D REA++I ERVTPRL HAN AVVLSAVK++++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNML 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 419 NADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVTLKYYT 470
NADELLESFLE F +E QVQL LLTA VKLFLKKP+E Q+++Q L T
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSET-QELVQQVLSLAT 511
>sp|Q9DBG3|AP2B1_MOUSE AP-2 complex subunit beta OS=Mus musculus GN=Ap2b1 PE=1 SV=1
Length = 937
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/472 (74%), Positives = 416/472 (88%), Gaps = 3/472 (0%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEE-NSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D+NPMVVANAVAAL+EI E + + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELIT-STDVVRNL 238
FILD LS Y D REA++I ERVTPRL HAN AVVLSAVK++++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNML 280
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 419 NADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVTLKYYT 470
NADELLESFLE F +E QVQL LLTA VKLFLKKP+E Q+++Q L T
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSET-QELVQQVLSLAT 511
>sp|O43079|AP1B1_SCHPO AP-1 complex subunit beta-1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=apl2 PE=1 SV=1
Length = 683
Score = 489 bits (1258), Expect = e-137, Method: Compositional matrix adjust.
Identities = 234/469 (49%), Positives = 338/469 (72%), Gaps = 2/469 (0%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DV+ + T ++ LKKLVYLYLINYAK+ PDL ILAVNTFVKDS++ NP
Sbjct: 45 MTVGKDVSSLFPDVLKNLATRDITLKKLVYLYLINYAKTHPDLCILAVNTFVKDSEEYNP 104
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+RALA+RTMGCIRV+KI YL DPL++ LKD+ PYVRK AA+CV K+YD++ E G
Sbjct: 105 TLRALAIRTMGCIRVNKIIGYLADPLRKALKDEHPYVRKAAAVCVVKMYDLDREYCASNG 164
Query: 121 FLESLKDLISDNNPMVVANAVAALAEI-EENSSRPIFEITSHTLSKLLTALNECTEWGQV 179
F+E L+ L+SD NP+VVANAV +LAEI +++ + F + +L+ AL+EC EWG++
Sbjct: 165 FIEQLQALVSDPNPVVVANAVRSLAEIHDQDPEKGYFNVVYTMTDRLMVALSECNEWGRI 224
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLC 239
IL++L+R++ +D +EAE + ERV P+ QHAN VVLSAVK+I+ + L +S D L
Sbjct: 225 TILNSLARFRTSDIKEAEYVCERVVPQFQHANSGVVLSAVKVIMVHIPLFSS-DFTDFLY 283
Query: 240 KKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEI 299
KKMAPPL+TLLS + EIQYVALRNINLI+Q+RP+I + +VFFCKYNDP+Y+KMEKL+I
Sbjct: 284 KKMAPPLLTLLSTDSEIQYVALRNINLILQKRPSIFDVKTRVFFCKYNDPLYIKMEKLKI 343
Query: 300 MIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKI 359
+ LA D NI++ + E + Y +EV+++FV++ ++ +G A+K+ CIS+ LE+ ++
Sbjct: 344 ITMLACDENINETISELRAYVSEVELEFVKQTIKCLGDVALKVPSVINDCISIFLEIYEL 403
Query: 360 KVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN 419
++Y+VQE +V++ + R+YP + ++ L ++ L +P A++SM WI+GE++ I
Sbjct: 404 NISYMVQEVTVVMETVLRKYPQKIDLLLPYLSRVIEELGDPRARSSMAWILGEFSHVIPT 463
Query: 420 ADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVTLKY 468
+ +LL + + +E Q+QL LLTA VKL L ++++Q L Y
Sbjct: 464 SSKLLSEMISTMADEDLQIQLALLTAVVKLSLMNGKGNDEELVQKVLNY 512
>sp|O43005|AP2B_SCHPO AP-2 complex subunit beta OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=apl1 PE=3 SV=1
Length = 677
Score = 426 bits (1095), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/465 (46%), Positives = 314/465 (67%), Gaps = 1/465 (0%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
++ G D+SSLF V++ M++ NLELKKL YLYL YA +P A AV + D NP
Sbjct: 42 ISYGYDMSSLFPSVISSMESNNLELKKLCYLYLKIYASVKPTEAKRAVKLILNDIYSSNP 101
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+IR+LA+RT+ + + DP+ R L D DPYVRKTAAI +AKLY + ++VE G
Sbjct: 102 MIRSLALRTLTSVNIKNFWVAAMDPIVRLLDDTDPYVRKTAAIGIAKLYSYDKKMVESSG 161
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
++ LK+++SD + +VVAN++AAL I +S+ + +KL+ +L +C+EW QV
Sbjct: 162 LIDHLKEMLSDESSVVVANSLAALMNIVNSSTGFKLTFSREISNKLVKSLTDCSEWLQVA 221
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCK 240
ILDAL Y EAE+ ER++P LQH N AV + AVK+IL + + V+
Sbjct: 222 ILDALIFYVPQKPGEAESFAERISPWLQHGNAAVCMGAVKVILYLTNYMKDDNRVKEYFM 281
Query: 241 KMAPPLVTLLSAEPE-IQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEI 299
K PPLVTLL+ + QYV LRNI +I+++ P + A++I F+C ++DPIYVK+EKL+I
Sbjct: 282 KTQPPLVTLLARKSSATQYVILRNIQIILEQCPEMFANDIHFFYCNFDDPIYVKLEKLDI 341
Query: 300 MIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKI 359
+ K+A N+DQ+L EF EYA+E+DV+ VRK+V+ IG AIK+E CI L+EL+
Sbjct: 342 LTKIADIHNLDQILPEFVEYASEIDVELVRKSVKCIGYLAIKIEERKNDCIDSLIELMNT 401
Query: 360 KVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN 419
KV YV+QEA+IVI+DI R+YP +Y+S++ L E+LD+LDEP+AK+++IWI+G+YAE I++
Sbjct: 402 KVTYVIQEAVIVIRDILRKYPGSYKSLVPILYENLDSLDEPDAKSAVIWILGQYAEEIED 461
Query: 420 ADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQV 464
+ LL +L+ F +EP ++QL LLTA +K+FLKKPT + V
Sbjct: 462 SITLLNDYLKGFFDEPLEIQLTLLTAVIKVFLKKPTAAADMVTNV 506
>sp|P36000|AP1B1_YEAST AP-1 complex subunit beta-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=APL2 PE=1 SV=1
Length = 726
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/466 (42%), Positives = 306/466 (65%), Gaps = 23/466 (4%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT+GKDVSSLF DV+ + T ++E KKLVYLY++NYA++ P+L ILAVNTF+ D+QDPNP
Sbjct: 54 MTLGKDVSSLFPDVLKNIATIDVEQKKLVYLYVMNYAETHPELCILAVNTFITDAQDPNP 113
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIR +A+RTM IRVDKI EY+ PL+R L DD+ YVRKTA ICVAKL+ +N +L + G
Sbjct: 114 LIRCMAIRTMSMIRVDKILEYIETPLRRTLHDDNAYVRKTAVICVAKLFQLNKDLCVELG 173
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPI---FEITSHTLSKLLTALNECTEWG 177
+E L + + D+NP+V+ANA AAL EI + I SH +S+ L ALNECTEW
Sbjct: 174 VVEDLVNALDDSNPLVIANATAALIEIHNMDMDAVDLSSLIQSH-VSQFLLALNECTEWA 232
Query: 178 QVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELI--TSTDVV 235
++ IL LS Y A D+ EA++I++RVT LQH N AVVL+ +K+I++ + I +S ++
Sbjct: 233 RIIILGTLSEYSAKDSLEAQDIIDRVTAHLQHVNPAVVLATIKVIVRNLPQIEYSSNSLI 292
Query: 236 RNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKME 295
K+++ V+L+S PE+QYVAL+NI +I+++ P +L E+++F+ K+NDP+YVK+E
Sbjct: 293 ---MKRLSSAFVSLMSTPPEMQYVALKNIRIILEKYPELLTKELRIFYVKFNDPLYVKLE 349
Query: 296 KLEIMIKLASDRNIDQ---VLLEFKEYATEVDVDFVRKAVRAIGRCAIKL--ERAAERCI 350
K++I+++L N+ Q +L E KEYA E + +FV +A++A+ + IK E + +
Sbjct: 350 KIDILVRLVDPSNLKQCTLLLTELKEYAMEYEPEFVSRAIQALSQLGIKYAQESFVSKVL 409
Query: 351 SVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPE-------AK 403
+LLEL++ + + + + I + D+ R P + + +C +T PE AK
Sbjct: 410 DILLELLE-RQDTIKDDCCISLCDLLRHCPGN-DKMAKQVCAVFNTWSNPEVLLQSDIAK 467
Query: 404 ASMIWIIGEYAERIDNADELLESFLESFPEEPAQVQLQLLTATVKL 449
+ +W++G++ + + + F+E+F +E A Q+ LL V+L
Sbjct: 468 CNYVWLLGQHPNNFSDLESKINIFIENFVQEEALTQMSLLMTIVRL 513
>sp|Q9LDK9|APBLA_ARATH Beta-adaptin-like protein A OS=Arabidopsis thaliana GN=BETAA-AD
PE=1 SV=1
Length = 841
Score = 315 bits (807), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 179/468 (38%), Positives = 287/468 (61%), Gaps = 15/468 (3%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT+G DVSS+F ++V C T ++ LKK+ YLY+ NYAK PDL++L +N +D +D +P
Sbjct: 55 MTIGIDVSSVFGEMVMCSATSDIVLKKMCYLYVGNYAKGNPDLSLLTINFLQRDCKDEDP 114
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+IR LA+R++ +RV + EYL PL LKD++ YVR A V KLY I+ D
Sbjct: 115 MIRGLALRSLCSLRVPNLVEYLVGPLGSGLKDNNSYVRTIAVTGVLKLYHISPSTCIDAD 174
Query: 121 FLESLKDL-ISDNNPMVVANAVAALAEI---EENSSRPIFEITSHTLSK-----LLTALN 171
F +LK L + D++ VVAN ++AL EI E + S LSK L +
Sbjct: 175 FPATLKSLMLHDSDAQVVANCLSALQEIWSLEASHSEEACREKESLLSKPVIYYFLNRIK 234
Query: 172 ECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITS 231
E EW Q IL+ +Y +D+ + +I+ + RLQHAN AVVL+ VK+ LQ ++
Sbjct: 235 EFNEWAQCLILELAVKYVPSDSNDIFDIMNLLEDRLQHANGAVVLATVKVFLQLT--LSM 292
Query: 232 TDVVRNLCKKMAPPLVTLL-SAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPI 290
TDV + + +++ PL+TL+ S PE Y L +++L+V R P I A + K F+C+YN+P
Sbjct: 293 TDVHQQVYERIKSPLLTLVSSGSPEQSYAILSHLHLLVVRAPFIFAADYKHFYCQYNEPS 352
Query: 291 YVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCI 350
YVK KLE++ +A++ N +++ E EYA VD+ R+++RA+G+ A++ + +
Sbjct: 353 YVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIAIARESIRAVGKIALQ-QYDVNAIV 411
Query: 351 SVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCE-SLDTLDEPEAKASMIWI 409
LL+ ++++ +YV E ++++KD+ R+YP I+ + S + EP+AKA++IW+
Sbjct: 412 DRLLQFLEMEKDYVTAETLVLVKDLLRKYPQWSHDCISVVGGISSKNIQEPKAKAALIWM 471
Query: 410 IGEYAERIDNADELLESFLESFPEE-PAQVQLQLLTATVKLFLKKPTE 456
+GEYA+ + +A +LE+ +E++ EE A+V+L LLTA +K F K+ E
Sbjct: 472 LGEYAQDMSDAPYVLENLIENWEEEHSAEVRLHLLTAAMKCFFKRAPE 519
>sp|Q9WV76|AP4B1_MOUSE AP-4 complex subunit beta-1 OS=Mus musculus GN=Ap4b1 PE=2 SV=2
Length = 738
Score = 261 bits (666), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/472 (32%), Positives = 262/472 (55%), Gaps = 14/472 (2%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT G D+S +F ++V T ++ KKLVYLY+ YA +PDLA+LA+NT KD DPNP
Sbjct: 40 MTQGLDMSDVFMEMVKASATVDIVQKKLVYLYMGTYAPLKPDLALLAINTLCKDCSDPNP 99
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
++R LA+R+M +R+ + EY+ P+ L+D YVR+ A + AK+++++ + D
Sbjct: 100 MVRGLALRSMCSLRMPGVQEYIQQPVVNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGA 159
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
+ L L+ D +P+VV N + +L EI + + I LL +++ +WGQ
Sbjct: 160 LVNELYSLLRDQDPIVVVNCLRSLEEILKQEGGVV--INKPIAHHLLNRMSKLDQWGQAE 217
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVK--MILQQMELITSTDVVRNL 238
+L+ L RY+ E +I+ + L+ ++ VV+ A K +IL + TDV L
Sbjct: 218 VLNFLLRYQPRSEEELFDILNLLDSYLKSSSTGVVMGATKLFLILAKKFPHVQTDV---L 274
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
+ P L S E+ + AL ++ ++ P + K FFC Y++P Y+K++K+E
Sbjct: 275 VRVKGPLLAACSSESRELCFAALCHVRQVLHSLPGHFSSHYKKFFCSYSEPHYIKLQKVE 334
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
++ +L +D N+ QVL E + Y T+V DF + A+ AIG A + ++C+ +L EL+
Sbjct: 335 VLCELVNDENVQQVLEELRGYCTDVAADFAQAAIFAIGSIA---KTYTDQCVQILTELLG 391
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
++ ++ + +D+ P E++ L + + + E K ++IW++G + E+I
Sbjct: 392 LRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCEENIQDSEGKQALIWLLGVHGEKIP 451
Query: 419 NADELLESFLESFPEE--PAQVQLQLLTATVKLFLKKPTEGPQQMIQVTLKY 468
NA +LE F+++ E PA V+++LLTA ++L L +P E Q M+ L Y
Sbjct: 452 NAPYVLEDFVDNVKSETFPA-VKMELLTALMRLVLSRPAEC-QDMLGRLLHY 501
>sp|Q9Y6B7|AP4B1_HUMAN AP-4 complex subunit beta-1 OS=Homo sapiens GN=AP4B1 PE=1 SV=2
Length = 739
Score = 255 bits (651), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 158/472 (33%), Positives = 264/472 (55%), Gaps = 14/472 (2%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT G D+S +F ++V T ++ KKLVYLY+ YA +PDLA+LA+NT KD DPNP
Sbjct: 40 MTQGLDMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNP 99
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
++R LA+R+M +R+ + EY+ P+ L+D YVR+ A + AK+++++ + D
Sbjct: 100 MVRGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGA 159
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
+ L L+ D +P+VV N + +L EI + + I LL +++ +WGQ
Sbjct: 160 LVNELYSLLRDQDPIVVVNCLRSLEEILKQEGGVV--INKPIAHHLLNRMSKLDQWGQAE 217
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVK--MILQQMELITSTDVVRNL 238
+L+ L RY+ E +I+ + L+ ++ VV+ A K +IL +M TDV L
Sbjct: 218 VLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKMFPHVQTDV---L 274
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
+ P L S E+ +VAL ++ I+ P + K FFC Y++P Y+K++K+E
Sbjct: 275 VRVKGPLLAACSSESRELCFVALCHVRQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVE 334
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
++ +L +D N+ QVL E + Y T+V DF + A+ AIG A ++C+ +L EL+
Sbjct: 335 VLCELVNDENVQQVLEELRGYCTDVSADFAQAAIFAIGGIA---RTYTDQCVQILTELLG 391
Query: 359 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 418
++ ++ + +D+ P E++ L + + + E K ++IW++G + ERI
Sbjct: 392 LRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCEENIQDSEGKQALIWLLGVHGERIP 451
Query: 419 NADELLESFLESFPEE--PAQVQLQLLTATVKLFLKKPTEGPQQMIQVTLKY 468
NA +LE F+E+ E PA V+++LLTA ++LFL +P E Q M+ L Y
Sbjct: 452 NAPYVLEDFVENVKSETFPA-VKMELLTALLRLFLSRPAEC-QDMLGRLLYY 501
>sp|Q54R84|AP4B_DICDI AP-4 complex subunit beta OS=Dictyostelium discoideum GN=ap4b1 PE=3
SV=1
Length = 838
Score = 254 bits (649), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 154/490 (31%), Positives = 262/490 (53%), Gaps = 41/490 (8%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT+G DVS LF DV+ + ++ +KKLVYLY+++Y+KS PDL +L VNT +D D NP
Sbjct: 54 MTIGMDVSVLFPDVIMVASSNDIIIKKLVYLYIVHYSKSNPDLLLLVVNTLRRDCIDRNP 113
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+IR LA+R++ + EY + R L D YVRKTA + +AKLY ++ E +
Sbjct: 114 IIRGLALRSLCSLDSKNTLEYATIEINRSLTDFSGYVRKTALLGLAKLYHLSKEAFDLDI 173
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
+ + D+I D +P V+ NAV+ L EI +P + T + L+ E EW Q
Sbjct: 174 IIPKIFDMIMDQDPQVIVNAVSTLNEI-----KPGWSFTFDLVQHLMIKFKEFNEWSQCI 228
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCK 240
IL+ LSRY + E+ +I+ + RL H+N A+ LS +K+ L+ + ++ + +
Sbjct: 229 ILECLSRYTPSSEDESLDILNLLDDRLSHSNSALTLSTIKIFLKYTDEF--EEIQEQVYE 286
Query: 241 KMAPPLVTLL--SAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
++ PL+TL+ S E + L +I+L++ R P + K F+CK++DP+Y+K K++
Sbjct: 287 RIKEPLITLMESSESNETSFTILHHIHLLMSRSPRLFNRYYKHFYCKFDDPLYIKTLKVQ 346
Query: 299 IMIKLASDR----NIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAER------ 348
++ ++AS++ +ID++L E EY E D ++++ AI A K + E+
Sbjct: 347 VLKEIASNQTFIESIDEILQELSEYVYEGDHSLCKQSINAITVIAQKHKNTQEKYPIDES 406
Query: 349 -CISVLLELIKIKVNY--------VVQEAI-----IVIKDIFRRYPNTYESIIATLCESL 394
+ L + + N + E I I +KD R +P ++++ + E+L
Sbjct: 407 VLEKIFLPYLSVSSNLGGAGDDNISINEGILSFILISLKDFLRVFPKHLKTVLPYINENL 466
Query: 395 DTLDE-------PEAKASMIWIIGEYAERIDNADELLESFL-ESFPEEPAQVQLQLLTAT 446
+ P A S++W++GE N+ ++E F E F ++P V+ QLLT +
Sbjct: 467 IGIGSVSNYTLPPSANESVLWMLGESPNSQVNSPYIIEEFFNEKFDQQPTFVKTQLLTTS 526
Query: 447 VKLFLKKPTE 456
+K+F +P E
Sbjct: 527 LKVFFDRPGE 536
>sp|Q9JME5|AP3B2_MOUSE AP-3 complex subunit beta-2 OS=Mus musculus GN=Ap3b2 PE=1 SV=2
Length = 1082
Score = 236 bits (602), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 155/497 (31%), Positives = 251/497 (50%), Gaps = 63/497 (12%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + +N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 68 GKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIR 127
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRKTAA + KLY ++++ + +E
Sbjct: 128 ASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSD--QKDQLIE 185
Query: 124 SLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L++D +V + V A E+ ++ KL L + EWGQV I+
Sbjct: 186 VIEKLLADKTTLVAGSVVMAFEEVCPER----IDLIHKNYRKLCNLLIDVEEWGQVVIIS 241
Query: 184 ALSRY-------------------------------KAADAREAEN-------------- 198
L+RY K + EA
Sbjct: 242 MLTRYARTQFLSPTQNESLLEENPEKAFYGSEEDEAKGPGSEEAATAALPARKPYVMDPD 301
Query: 199 ---IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPE 255
++ P LQ + AVV++ ++ L +V +A LV LL + E
Sbjct: 302 HRLLLRNTKPLLQSRSAAVVMAVAQLYFH---LAPKAEV-----GVIAKALVRLLRSHSE 353
Query: 256 IQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLE 315
+QYV L+N+ + +R + +K F+ + DP +K+ KLE++ LA++ NI VL E
Sbjct: 354 VQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPTVLRE 413
Query: 316 FKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDI 375
F+ Y +D DFV ++AIGRCA + R + C++ L++L+ + VV E+++VIK +
Sbjct: 414 FQTYIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKL 473
Query: 376 FRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADELLESFLESFPEE 434
+ P + II L + D + P A+AS++W+IGEY E + A ++L +SF E
Sbjct: 474 LQMQPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCEHVPKIAPDVLRKMAKSFTAE 533
Query: 435 PAQVQLQLLTATVKLFL 451
V+LQ++ KL+L
Sbjct: 534 EDIVKLQVINLAAKLYL 550
>sp|Q13367|AP3B2_HUMAN AP-3 complex subunit beta-2 OS=Homo sapiens GN=AP3B2 PE=1 SV=2
Length = 1082
Score = 235 bits (599), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 156/489 (31%), Positives = 251/489 (51%), Gaps = 47/489 (9%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + +N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 68 GKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIR 127
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRKTAA + KLY ++++ + +E
Sbjct: 128 ASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSDQKDQ--LIE 185
Query: 124 SLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L++D +V + V A E+ ++ KL L + EWGQV I+
Sbjct: 186 VIEKLLADKTTLVAGSVVMAFEEVCPER----IDLIHKNYRKLCNLLIDVEEWGQVVIIS 241
Query: 184 ALSRY-------------------------------KAADARE-AENIVERVTPRLQHAN 211
L+RY K A + E A P + +
Sbjct: 242 MLTRYARTQFLSPTQNESLLEENAEKAFYGSEEDEAKGAGSEETAAAAAPSRKPYVMDPD 301
Query: 212 CAVVLSAVKMILQQMELITSTDVVR---NLCKK-----MAPPLVTLLSAEPEIQYVALRN 263
++L K +LQ V + +L K +A LV LL + E+QYV L+N
Sbjct: 302 HRLLLRNTKPLLQSRSAAVVMAVAQLYFHLAPKAEVGVIAKALVRLLRSHSEVQYVVLQN 361
Query: 264 INLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEV 323
+ + +R + +K F+ + DP +K+ KLE++ LA++ NI VL EF+ Y +
Sbjct: 362 VATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPTVLREFQTYIRSM 421
Query: 324 DVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTY 383
D DFV ++AIGRCA + R + C++ L++L+ + VV E+++VIK + + P +
Sbjct: 422 DKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPAQH 481
Query: 384 ESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADELLESFLESFPEEPAQVQLQL 442
II L + D + P A+AS++W+IGEY E + A ++L +SF E V+LQ+
Sbjct: 482 GEIIKHLAKLTDNIQVPMARASILWLIGEYCEHVPRIAPDVLRKMAKSFTAEEDIVKLQV 541
Query: 443 LTATVKLFL 451
+ KL+L
Sbjct: 542 INLAAKLYL 550
>sp|Q7YRF1|AP3B1_CANFA AP-3 complex subunit beta-1 OS=Canis familiaris GN=AP3B1 PE=2 SV=1
Length = 1091
Score = 233 bits (593), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 155/487 (31%), Positives = 248/487 (50%), Gaps = 53/487 (10%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 73 GKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIR 132
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRK AA + KLY ++ E E +E
Sbjct: 133 ASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPEQKE--MLIE 190
Query: 124 SLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L+ D + +V + V A E+ + ++ KL L + EWGQV I+
Sbjct: 191 VIEKLLKDKSTLVAGSVVMAFEEVCPDR----IDLIHKNYRKLCNLLVDVEEWGQVVIIH 246
Query: 184 ALSRYK----------------------AADAREAEN----------------IVERVTP 205
L+RY +D + E ++ P
Sbjct: 247 MLTRYARTQFVSPWKEDDGLEDNEKNFYESDDEQKEKTDQKKKPYAMDPDHRLLIRNTKP 306
Query: 206 RLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNIN 265
LQ N AVV++ ++ I+ V + K LV LL + E+QY+ L+NI
Sbjct: 307 LLQSRNAAVVMAVAQLYWH----ISPKSEVGIISKS----LVRLLRSNREVQYIVLQNIA 358
Query: 266 LIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDV 325
+ +R +L +K F+ + DP +K+ KLEI+ LA++ NI +L EF+ Y D
Sbjct: 359 TMSIQRKGMLEPYLKSFYVRSTDPTMIKILKLEILTNLANEANISTLLREFQTYVKSQDK 418
Query: 326 DFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYES 385
F ++ IGRCA + + C+S L+ L+ + VV E+++VIK + + P +
Sbjct: 419 QFAAATIQTIGRCATSISEVTDTCLSGLVCLLSNRDEIVVAESVVVIKKLLQMQPAQHGE 478
Query: 386 IIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADELLESFLESFPEEPAQVQLQLLT 444
II + + LD++ P A+AS++W+IGE ER+ A ++L +SF E V+LQ+L
Sbjct: 479 IIKHMAKLLDSITVPVARASILWLIGENCERVPKIAPDVLRKMAKSFTNEDDLVKLQILN 538
Query: 445 ATVKLFL 451
KL+L
Sbjct: 539 LGAKLYL 545
>sp|O00203|AP3B1_HUMAN AP-3 complex subunit beta-1 OS=Homo sapiens GN=AP3B1 PE=1 SV=3
Length = 1094
Score = 228 bits (582), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 152/487 (31%), Positives = 245/487 (50%), Gaps = 53/487 (10%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 73 GKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIR 132
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRK AA + KLY ++ E + +E
Sbjct: 133 ASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPE--QKEMLIE 190
Query: 124 SLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L+ D + +V + V A E+ + ++ KL L + EWGQV I+
Sbjct: 191 VIEKLLKDKSTLVAGSVVMAFEEVCPDR----IDLIHKNYRKLCNLLVDVEEWGQVVIIH 246
Query: 184 ALSRY---------KAADAREAEN-----------------------------IVERVTP 205
L+RY K D E ++ P
Sbjct: 247 MLTRYARTQFVSPWKEGDELEDNGKNFYESDDDQKEKTDKKKKPYTMDPDHRLLIRNTKP 306
Query: 206 RLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNIN 265
LQ N AVV+ AV + + + ++ + LV LL + E+QY+ L+NI
Sbjct: 307 LLQSRNAAVVM-AVAQLYWHISPKSEAGII-------SKSLVRLLRSNREVQYIVLQNIA 358
Query: 266 LIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDV 325
+ +R + +K F+ + DP +K KLEI+ LA++ NI +L EF+ Y D
Sbjct: 359 TMSIQRKGMFEPYLKSFYVRSTDPTMIKTLKLEILTNLANEANISTLLREFQTYVKSQDK 418
Query: 326 DFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYES 385
F ++ IGRCA + + C++ L+ L+ + VV E+++VIK + + P +
Sbjct: 419 QFAAATIQTIGRCATNILEVTDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQMQPAQHGE 478
Query: 386 IIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADELLESFLESFPEEPAQVQLQLLT 444
II + + LD++ P A+AS++W+IGE ER+ A ++L +SF E V+LQ+L
Sbjct: 479 IIKHMAKLLDSITVPVARASILWLIGENCERVPKIAPDVLRKMAKSFTSEDDLVKLQILN 538
Query: 445 ATVKLFL 451
KL+L
Sbjct: 539 LGAKLYL 545
>sp|Q9Z1T1|AP3B1_MOUSE AP-3 complex subunit beta-1 OS=Mus musculus GN=Ap3b1 PE=1 SV=2
Length = 1105
Score = 227 bits (579), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 153/488 (31%), Positives = 244/488 (50%), Gaps = 54/488 (11%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 73 GKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIR 132
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRK AA + KLY ++ E E +E
Sbjct: 133 ASALRVLSSIRVPIIVPVMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPEQKE--MLIE 190
Query: 124 SLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L+ D + +V + V A E+ + ++ KL L + EWGQV I+
Sbjct: 191 VIEKLLKDKSTLVAGSVVMAFEEVCPDR----IDLIHRNYRKLCNLLVDVEEWGQVVIIH 246
Query: 184 ALSRYKAA--------DAREAEN-------------------------------IVERVT 204
L+RY D +N ++
Sbjct: 247 MLTRYARTQFVSPWREDGGLEDNEKNFYESEEEEEEKEKSSRKKSYAMDPDHRLLIRNTK 306
Query: 205 PRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNI 264
P LQ N AVV+ AV + + + V+ + LV LL + E+QY+ L+NI
Sbjct: 307 PLLQSRNAAVVM-AVAQLYWHISPKSEAGVI-------SKSLVRLLRSNREVQYIVLQNI 358
Query: 265 NLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVD 324
+ R + +K F+ + DP +K KLEI+ LA++ NI +L EF+ Y D
Sbjct: 359 ATMSIERKGMFEPYLKSFYVRSTDPTMIKTLKLEILTNLANEANISTLLREFQTYVRSQD 418
Query: 325 VDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYE 384
F ++ IGRCA + + C++ L+ L+ + VV E+++VIK + + P +
Sbjct: 419 KQFAAATIQTIGRCATSISEVTDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQMQPAQHG 478
Query: 385 SIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADELLESFLESFPEEPAQVQLQLL 443
II + + LD++ P A+AS++W+IGE ER+ A ++L +SF E V+LQ+L
Sbjct: 479 EIIRHMAKLLDSITVPVARASILWLIGENCERVPKIAPDVLRKMAKSFTSEDDLVKLQIL 538
Query: 444 TATVKLFL 451
KL+L
Sbjct: 539 NLAAKLYL 546
>sp|Q32PG1|AP3B1_BOVIN AP-3 complex subunit beta-1 OS=Bos taurus GN=AP3B1 PE=2 SV=1
Length = 1084
Score = 225 bits (574), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 152/487 (31%), Positives = 248/487 (50%), Gaps = 53/487 (10%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 73 GKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIR 132
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRK AA + KLY ++ E E +E
Sbjct: 133 ASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPEQKE--MLIE 190
Query: 124 SLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L+ D + +V + V A E+ + ++ KL L + EWGQV I+
Sbjct: 191 IIEKLLKDKSTLVAGSVVMAFEEVCPDR----IDLIHKNYRKLCNLLVDVEEWGQVVIIH 246
Query: 184 ALSRY------------------------------KAADAR--------EAENIVERVTP 205
L+RY + AD R + ++ P
Sbjct: 247 MLTRYARTQFVSPWRQGDVLEDNEKDFYDSDEEQKEKADKRKRPYAMDPDHRLLIRNTKP 306
Query: 206 RLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNIN 265
LQ N AVV+ AV + + + ++ + LV LL + E+QY+ L+NI
Sbjct: 307 LLQSRNAAVVM-AVAQLYWHIAPKSEAGII-------SKSLVRLLRSSREVQYIVLQNIA 358
Query: 266 LIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDV 325
+ +R + +K F+ + D +K+ KLEI+ LA++ NI +L EF+ Y D
Sbjct: 359 TMSIQRKGMFEPYLKSFYVRSTDATMIKILKLEILTNLANEANISTLLREFQTYVKSQDK 418
Query: 326 DFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYES 385
F ++ IGRCA + ++ C++ L+ L+ + VV E+++VIK + + P +
Sbjct: 419 QFAAATIQTIGRCATSITEVSDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQMQPMQHGE 478
Query: 386 IIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADELLESFLESFPEEPAQVQLQLLT 444
II + + LD++ P A+AS++W+IGE ER+ A ++L +SF E V+LQ+L
Sbjct: 479 IIKHMAKLLDSITVPVARASILWLIGENCERVPKIAPDVLRKTAKSFTSEDDLVKLQILN 538
Query: 445 ATVKLFL 451
KL+L
Sbjct: 539 LGAKLYL 545
>sp|P27351|AP2B_YEAST AP-2 complex subunit beta OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=APL1 PE=1 SV=2
Length = 700
Score = 215 bits (547), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 149/472 (31%), Positives = 264/472 (55%), Gaps = 15/472 (3%)
Query: 6 DVSSLFTDVVNCMQTEN-LELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRA 64
++S LF++++ Q E+ LE+K++ + Y+ +P A A+ + D + + ++
Sbjct: 52 EMSVLFSELLKFWQIEDDLEVKRICHEYIRVIGALKPQQAREALPFIMDDFKSRDEKLQI 111
Query: 65 LAVRTMGCIRVDKITEYLCDPLQRCLKDDDP--YVRKTAAICVAKLYDINAELVEDRGFL 122
+A+RT+ + V ++++ D + + P V +TA + L +I+ E V G
Sbjct: 112 MALRTLVLVPVKELSDQAFDCIISLVNHKSPPEQVTRTAIYALLDLDEIDHERV--LGLS 169
Query: 123 ESLKDLI--SDNNPMVVANAVAALAEIEE-NSSRPIFEITSHTLSKLLTALNECTEWGQV 179
L D++ ++P V+ A+ L I E N++ F I +L L E EW +
Sbjct: 170 SILHDIVKAQSSSPEVIVAALHTLYSIHEKNANMEPFRIPLELAFDMLELLPELNEWNKA 229
Query: 180 FILDALSRYKAADAR-EAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVR-N 237
+L+ L+ + ++E P LQ N VVL+++K I M L+ DV++
Sbjct: 230 TVLEVLTTSVVPQHYLDTHEMIELALPYLQQVNTYVVLNSLKFI---MYLLNYVDVIKET 286
Query: 238 LCKKMAPPLVTLLSAEPEIQYVALRN-INLIVQRRPTILAHEIKVFFCKYNDPIYVKMEK 296
L +K++ ++ LL PE+Q++ LRN I L++ R ++L +I FF +YNDPIY+K K
Sbjct: 287 LAEKLSNSVIALLDKPPELQFLVLRNVILLLLSRESSLLRLDISYFFIEYNDPIYIKDTK 346
Query: 297 LEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKL-ERAAERCISVLLE 355
LE + LA+ + ++L E ++YAT++D+ RK+VRAIG A+KL E + C++VLL+
Sbjct: 347 LECLYLLANKETLPRILEELEQYATDIDIQMSRKSVRAIGNLAVKLDEDSVHDCVAVLLD 406
Query: 356 LIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAE 415
L++ V+YVVQE I V ++I R+YPN +++ + L + + + EPE+K +MIWII +Y++
Sbjct: 407 LLEFGVDYVVQEIISVFRNILRKYPNNFKANVTELVKHTEVVQEPESKNAMIWIITQYSD 466
Query: 416 RIDNADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVTLK 467
I N EL F + E +VQ +L + +K F++ PT+ +++ LK
Sbjct: 467 VIPNYLELFRVFSSNMFSETLEVQFSILNSAIKFFIRSPTKETEELCMDLLK 518
>sp|O13939|AP3B_SCHPO AP-3 complex subunit beta OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=apl6 PE=1 SV=1
Length = 745
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 140/475 (29%), Positives = 236/475 (49%), Gaps = 29/475 (6%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
M G+++S F DVV + +EN E+++LV++YL+ YA+ PDLA+L+VNT K D NP
Sbjct: 61 MMHGENMSLYFPDVVKLVASENPEIRRLVHIYLLQYAEFNPDLALLSVNTVQKTLYDKNP 120
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
L R+ A+R M IRV I + +Q+C+ D VR++AA+ + K Y ++
Sbjct: 121 LTRSTAIRVMSSIRVPAINGIVLLAIQQCITDTADRVRQSAALAITKCYSLDPSY--KSQ 178
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
E +K L+SDN+P+VV AAL E + EI ++ T + +W +V
Sbjct: 179 LEEHIKTLLSDNSPIVVP---AALFTFEVVCPEKL-EIIHPYYHRICTLFPQMNDWDKVV 234
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVV----- 235
L L RY AR + E TP H++ +L ++K L+ ST +
Sbjct: 235 ALKTLVRY----ARLT--LPEPSTPS-THSDLKELLESIKSCF--FSLLPSTIIAGARAF 285
Query: 236 -----RNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPI 290
N + PL+ LL +P ++ LR I+ IV + P + + IK FF +D
Sbjct: 286 YYLAPSNQMHLIVEPLLQLLLEKPIVRTTTLRYISQIVYKTPELFKNHIKSFFLIASDSD 345
Query: 291 YVKMEKLEIMIKLASDRNIDQVLLEFKEY-ATEVDVDFVRKAVRAIGRCAIKLERAAERC 349
+ K+ I+ +L +N Q+L E Y + + AV+A+G A A C
Sbjct: 346 DTCLLKINILSRLLDAQNSSQILPELLYYINSHPNPSVASTAVKALGDFASANISMAPSC 405
Query: 350 ISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWI 409
++ LL L+K + +V EA ++ + P E + L + +TL+ P AK+ +W+
Sbjct: 406 LNTLLLLLKSHNSLIVTEAASSLRLLIHNDPK--EIYLQYLAATYETLEVPRAKSVTLWL 463
Query: 410 IGEYAERIDN-ADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQ 463
I E+ I ++L +++F +E +V+ Q+L +V+L++ +E Q ++
Sbjct: 464 ISEHILIIPRLVPDVLRIAVKTFADETLEVKYQILELSVRLYVLSHSEEKQNDLE 518
>sp|Q556J8|AP3B_DICDI AP-3 complex subunit beta OS=Dictyostelium discoideum GN=ap3b-1
PE=3 SV=1
Length = 1108
Score = 128 bits (322), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 129/249 (51%), Gaps = 35/249 (14%)
Query: 239 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 298
+K+ LV +L + PE+QY+ L NI+ +V RP++ + FF +DP Y KLE
Sbjct: 329 AQKVGKSLVRILRSGPEVQYITLTNISTMVTLRPSMFEPHLSEFFIHSSDPEYSIKLKLE 388
Query: 299 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 358
I+ +LA+ NI ++L EFKEY D FV ++AIG CA + E CI L+ L+
Sbjct: 389 ILTRLATPENIGKILKEFKEYVKNEDKKFVAATIQAIGSCASTVPDVTESCIYGLMSLLS 448
Query: 359 IKVNYVVQEAIIVIKDIFR-----------------------------RYPNT-----YE 384
+ VV E++IV+K + + ++ ++ Y+
Sbjct: 449 NQSTVVVAESVIVLKRLLQLNATNEKLEKLEKEKEKEKDVKENQSTISKHSSSNNSIKYD 508
Query: 385 SIIATLCESLDTLDEPEAKASMIWIIGEYAERID-NADELLESFLESFPEEPAQVQLQLL 443
+II L + LDTL P A+AS++W+IGEY R+ A ++ ++SF +E V+L+ L
Sbjct: 509 NIILHLSKLLDTLQVPSARASIVWVIGEYCYRVPLVAPDVFRKLVKSFSDEHESVKLETL 568
Query: 444 TATVKLFLK 452
KL+++
Sbjct: 569 NLGSKLYVQ 577
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 115/194 (59%), Gaps = 6/194 (3%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
++ G+DVS F VV + +NLE+KKLVY+YL++YA+SQ D A+L++NT K D +
Sbjct: 49 LSKGRDVSEAFPQVVKNVIVKNLEIKKLVYMYLVHYAESQNDSALLSINTIQKSLNDQSQ 108
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+IRA A+R M IRV I E + +++ +KD P+VRK AA +AK++ ++ + E
Sbjct: 109 VIRASALRVMSSIRVIDIIEVIILAIEKSVKDTSPFVRKAAAFAIAKVHKLDCDKQE--P 166
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
++ L+ L++D + MV+ A+ A E+ F++ K+ L + EW QV
Sbjct: 167 LIDLLEILLNDTSTMVLGAAIVAFNELCPQR----FDLLHQHYRKICQLLADFDEWSQVI 222
Query: 181 ILDALSRYKAADAR 194
+LD L++Y + R
Sbjct: 223 VLDILTKYARSQFR 236
>sp|Q759E2|AP3B_ASHGO AP-3 complex subunit beta OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=APL6 PE=3 SV=2
Length = 781
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/484 (24%), Positives = 224/484 (46%), Gaps = 56/484 (11%)
Query: 11 FTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTM 70
F D+V + +++++++++V +YL+ YA++ P+LA+L++N+ + D NP +RALA++T+
Sbjct: 83 FADIVKNIGSDDVKVRRMVSVYLLRYAETNPNLALLSINSIQRSLSDSNPDVRALALKTL 142
Query: 71 GCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLIS 130
I + + + L++ + D VR A+ + KL+ ++D + LK L++
Sbjct: 143 SDINIASLYPIILHSLKKTVIDSSEVVRCQVAMTLLKLFKEQGISIKD-DVMPMLKSLLA 201
Query: 131 DNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILD------- 183
D+ P VV+ AAL ++ ++ + + H + + LN+ TE Q ++D
Sbjct: 202 DSEPSVVS---AALLLFQKAFAQELQLLHGH-YRRYCSILNQLTENAQAIMIDIFIAYAK 257
Query: 184 -----ALSRYKAADAREAE---------------------NIVERVTPRLQHANCAVVLS 217
+ R ++DA + N+ +L H+ A+V+
Sbjct: 258 EYLPRPMVRDTSSDAEAIQLPDSFNQIPFPVYDVEYDHDLNLFLSSLKKLLHSPNAMVIV 317
Query: 218 AVKMILQQM---ELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTI 274
AV Q+ + + +V +L + + EI+ + L++I + P++
Sbjct: 318 AVSKAFYQLSSPKTFKDSGIVDSLLRLTVSSYIC-----SEIKELVLQSILVYCCSDPSL 372
Query: 275 LAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYA-TEVDVDFVRKAVR 333
K FF +D + + KL+I+ L SD N ++ E K A TE + +
Sbjct: 373 FRSHYKRFFLMPSDTENISIFKLKILSILVSDSNCKHIVNELKFVAGTEQSASILVEVSN 432
Query: 334 AIGRCAIKLERAAERCISVLLELIKIKV---NYVVQEAIIVIKDIFRRYPNTYESIIATL 390
+ CA + + + IS LL+ I V I V++ + ++ P + + + L
Sbjct: 433 TLSVCAQISSKWSSQIISWLLDRISSNTPIDKEVTASQINVLRSLIQKDPIKHIATVVKL 492
Query: 391 CESLDTLD-EPEAKASMIWIIGEYAE---RIDNADELLESFLESFPEEPAQVQLQLLTAT 446
+ L D P AKA +IW++GEY + RI ++L L F +E A V+LQ+L
Sbjct: 493 SKMLSNHDLLPSAKAPIIWLLGEYVQVEPRI--CPDVLRRLLPQFSKEHAHVRLQILNLA 550
Query: 447 VKLF 450
KL
Sbjct: 551 AKLL 554
>sp|P46682|AP3B_YEAST AP-3 complex subunit beta OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=APL6 PE=1 SV=2
Length = 809
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 110/493 (22%), Positives = 225/493 (45%), Gaps = 62/493 (12%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
DV F DVV + T + ++K+L++LYL+ +A++ P+L +L++N+ K D N +R
Sbjct: 78 DVQLYFADVVKNITTNDTKVKRLIHLYLLRFAENDPNLTLLSINSLQKSLSDSNSELRCF 137
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLY-----DINAELVEDRG 120
A+ + +++ + + +++ + D VR A+ + KLY D + EL
Sbjct: 138 ALSALSDMKMSSLAPIILHTVKKLVTDPSAMVRGEVALAIIKLYRAGKNDYHEEL----- 192
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
L+ LK+L++D +P V++ AV A E + E+ + + + W Q +
Sbjct: 193 -LDILKELMADTDPKVISCAVLAYKECYADH----LELLHGHFRRYCRIIKQLDSWSQSY 247
Query: 181 ILDALSRY------KAADAREAENIVERVTP------RLQHANCAVVLSA-VKMILQQME 227
+++ L +Y K ++ R P +++ + VV + + LQ +
Sbjct: 248 LIELLIKYCKQYLPKPTVVDKSSEGSPRSCPLPDKYNEIEYPSYEVVNDPDLDLFLQSLN 307
Query: 228 -LITSTD--VVRNLCK---KMAPPL--------------VTLLSAEPEIQYVALRNINLI 267
LI S++ V+ + C ++A PL VT+ + + + L+ I+ +
Sbjct: 308 CLIYSSNPTVILSCCNALYQLASPLQMKNTKFIEALVRTVTMTENQGNKEML-LQAIHFL 366
Query: 268 VQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDV-- 325
T+ K F+ DPI + K++I+ L ++ N+ ++ E K Y
Sbjct: 367 SILDQTLFLPYTKKFYVFPKDPIVASIWKIQILSTLINESNVKEIFKELKYYVASAHFPE 426
Query: 326 DFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-----VIKDIFRRYP 380
+ V AV+++ RC +L + E V+ LI ++ + +++ VI+ + ++ P
Sbjct: 427 NVVIMAVKSLSRCG-QLSTSWES--HVMKWLIDHMESHNLSASVLDAYVNVIRMLVQKNP 483
Query: 381 NTYESIIATLCE--SLDTLDEPEAKASMIWIIGEYAE-RIDNADELLESFLESFPEEPAQ 437
+ II L + ++ T A+A ++W+ GE A ++L +++F E +
Sbjct: 484 TKHLRIIFKLADLLTVQTSLADNARAGIVWLFGEIASIEFKICPDVLRRLIQNFSNEGPE 543
Query: 438 VQLQLLTATVKLF 450
+ Q+L + KL
Sbjct: 544 TRCQILVLSAKLL 556
>sp|Q9M2T1|AP3BA_ARATH AP3-complex subunit beta-A OS=Arabidopsis thaliana GN=AP3BA PE=2
SV=2
Length = 987
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 131/267 (49%), Gaps = 27/267 (10%)
Query: 203 VTPRLQHANCAVVLSA--VKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVA 260
+P L N AVVL+A V+ I+ +E DV KK+ PL+ LL + +YV
Sbjct: 215 TSPLLWSNNSAVVLAAAGVQWIMAPLE-----DV-----KKIVKPLLFLLRSSSASKYVV 264
Query: 261 LRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYA 320
L NI + + P++ A + FF +D VK KLE++ +A+ +I +L EF++Y
Sbjct: 265 LCNILVFAKAVPSLFAPHFENFFICSSDAYQVKAYKLEMLSLIATTSSIASILREFEDYI 324
Query: 321 TEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKV-----------NYVVQEAI 369
+ D F V AIG CA +L C+ LL L++ + V+ +A+
Sbjct: 325 KDPDRRFAADTVAAIGLCAKRLMTIPTTCLDGLLALVRQESFAGDFESADGEAGVLVQAV 384
Query: 370 IVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLE 429
+ I+ + R P +E ++ L SLD++ A+A++IW++G Y +L + +
Sbjct: 385 MSIQTMIERDPLRHEKVLIQLFRSLDSIKVAAARATIIWMVGVYCSLGHIIPRMLTTITK 444
Query: 430 ----SFPEEPAQVQLQLLTATVKLFLK 452
SF E ++ +LQ+L K+ +
Sbjct: 445 YLAWSFKSEASETKLQILNTIAKVLIS 471
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 70 MGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-L 128
M IR+ I + +C +D YVR+ AA + KL+D+ E E +E L L
Sbjct: 1 MAGIRLHVIAPLALAAVSKCARDPAVYVRRCAANALPKLHDLRLE--EHASAIEELVGIL 58
Query: 129 ISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILDALSRY 188
++D++P VV A AA I N+ F++ KL L + EWGQ+ ++ L RY
Sbjct: 59 LNDHSPGVVGAAAAAFTSICPNN----FKLIGKNYKKLCQILPDVEEWGQILLIGTLLRY 114
Query: 189 KAA 191
A
Sbjct: 115 VVA 117
>sp|P41810|COPB_YEAST Coatomer subunit beta OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SEC26 PE=1 SV=2
Length = 973
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 195/423 (46%), Gaps = 48/423 (11%)
Query: 18 MQTENLELKKLVYLY------LINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMG 71
M ++N ELKKL+Y Y L K + ++ IL N D Q PN IR +R +
Sbjct: 69 MPSKNKELKKLLYFYWEIVPKLAEDGKLRHEM-ILVCNAIQHDLQHPNEYIRGNTLRFLT 127
Query: 72 CIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVED-RGFLESLKDLIS 130
+R ++ E + + CL+ YVRK A + V ++ ++ L+ D + + S +++
Sbjct: 128 KLREAELLEQMVPSVLACLEYRHAYVRKYAILAVFSIFKVSEHLLPDAKEIINSF--IVA 185
Query: 131 DNNPMVVANAVAALAEIEENSSRPIFE---ITSHTLSKLLTALNECTEWGQVFILDALSR 187
+ +P+ NA LAE++ ++ E L LL A+ + Q FI +R
Sbjct: 186 ETDPICKRNAFIGLAELDRENALHYLENNIADIENLDPLLQAV-----FVQ-FIRQDANR 239
Query: 188 YKAADAREAENIVERVTPR------LQHANCAVVLSAVKMILQQMELITSTDVVRNLCKK 241
A A+ E ++E ++ + A VLSA +L + + + + +L K
Sbjct: 240 TPALKAQYIELLMELLSTTTSDEVIFETALALTVLSANPNVL-----VPAVNKLIDLAVK 294
Query: 242 MAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMI 301
++ + L+ + IQ + N+ + + IL +V + D V+ + L+I +
Sbjct: 295 VSDNNIKLIVLD-RIQDINANNVGALEELTLDIL----RVLNAEDLD---VRSKALDISM 346
Query: 302 KLASDRNIDQVL-LEFKEYATEVDVDFVRKA-------VRAIGRCAIKLERAAERCISVL 353
LA+ RN + V+ L KE T V+ KA ++ I A+ A +S+L
Sbjct: 347 DLATSRNAEDVVQLLKKELQTTVNNPDQDKAMQYRQLLIKTIRTVAVNFVEMAASVVSLL 406
Query: 354 LELIKIKVNYVVQEAIIV-IKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGE 412
L+ I +N V II IK++ +YP +I+ + ++LD + +A +WI+GE
Sbjct: 407 LDFIG-DLNSVAASGIIAFIKEVIEKYPQLRANILENMVQTLDKVRSAKAYRGALWIMGE 465
Query: 413 YAE 415
YAE
Sbjct: 466 YAE 468
>sp|Q9UUF7|COPB_SCHPO Coatomer subunit beta OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=sec26 PE=3 SV=1
Length = 940
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 178/451 (39%), Gaps = 36/451 (7%)
Query: 4 GKDVSSLFTDVVN-CMQTENLELKKLVYLYL-----INYAKSQPDLAILAVNTFVKDSQD 57
G + S+ V+ M + N ELKKL+Y Y N + ILA N+F D Q
Sbjct: 46 GDSLPSILMHVIRFVMPSRNKELKKLLYYYWEVCPKYNNDGTMKQEMILACNSFRNDLQH 105
Query: 58 PNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVE 117
PN IR +R + ++ ++ + L +++CL+ YVRK A + V +Y ++ L+
Sbjct: 106 PNEFIRGATLRFLCKLKEPELLDPLIPTVRQCLEHRHAYVRKNAILAVFSIYQVSNHLIP 165
Query: 118 DRGFLESLKDLISDNNPMVVANAVAALAEIEENSSRPIF-----EITSHTLSKLLTALNE 172
D L L +++ NA+ L I+ ++ +I S S LL +
Sbjct: 166 DAASLAE-DFLAAESEGTCKRNALIVLFTIDPEKAKAWLLANFEQIPSLNASSLLVII-- 222
Query: 173 CTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITST 232
E+ + +L AD E + N +VV A ++
Sbjct: 223 --EFIRKVVL------TKADGLEKLRFQSLLVSLTATNNSSVVFEAATSVINVF-----P 269
Query: 233 DVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIK--VFFCKYNDPI 290
D + A+ + + L I+ + R +IL I + F +D
Sbjct: 270 DAESLKLAASRLLALADREADNNAKLIMLDRISQLAARDKSILEDLITDVIPFLSSSD-F 328
Query: 291 YVKMEKLEIMIKLASDRNIDQVLLEFKE------YATEVDVDFVRKAVRAIGRCAIKLER 344
V + + I++ L S RN++ +L F++ TE D R +AI CAI
Sbjct: 329 DVCEKAISIIMGLVSSRNVEDILNHFQKELTKSNGETEKDDGRRRALTKAIHSCAINFPH 388
Query: 345 AAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKA 404
A I LL I + + IK++ ++P+ S I L SL L +
Sbjct: 389 TAATAIQYLLSHISDFQSKSASSVLSFIKEVMEKFPDLRSSNITKLLLSLKELRAGKIFR 448
Query: 405 SMIWIIGEYAERIDNADELLESFLESFPEEP 435
+IWI GEY D+ +S S E P
Sbjct: 449 GVIWIAGEYCLTEDDIRVAWKSIRASLGEVP 479
>sp|Q6FM46|COPB_CANGA Coatomer subunit beta OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC26 PE=3
SV=1
Length = 972
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 171/392 (43%), Gaps = 47/392 (11%)
Query: 45 ILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAIC 104
IL N D Q PN IR +R + +R ++ E + CL+ YVRK A +
Sbjct: 101 ILVCNAIQHDLQHPNEFIRGNTLRFLTKLREPELLEQMVPSTLACLEYRHAYVRKYAILA 160
Query: 105 VAKLYDINAELVED-RGFLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITS--- 160
V +Y ++ L+ D + + + L+++ +P+ NA L+E++ +++ +
Sbjct: 161 VLSIYKVSEHLLPDAKEIINTF--LLAETDPICKRNAFLGLSELDRDNALQYLQDNIDDI 218
Query: 161 HTLSKLLTALNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVL---- 216
+L LL A A ++ DA + TP L+ C ++L
Sbjct: 219 ESLDPLLQA--------------AFVQFIRKDAIQ--------TPALKSQYCDLLLELLA 256
Query: 217 --SAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLS--AEPEIQYVALRNINLIVQRRP 272
+A +++ + +T + + K ++ L ++ ++ + L I I +R P
Sbjct: 257 SATADEVVFETALALTILSGNQTVLIKAVSKMIDLAVKVSDNNVKIIVLDRIQDINERNP 316
Query: 273 TILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVL-LEFKEYATEV------- 323
L + + + I V+ + L I + L + RNI+ V+ L KE T V
Sbjct: 317 GCLEELTLDILRVLNAEDIDVRSKALTIAMDLVTSRNIEDVVQLLKKELQTTVINNEKEK 376
Query: 324 DVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIV-IKDIFRRYPNT 382
D+ ++ I A++ E A +S+LL+ I +N V +I +KD+ YP
Sbjct: 377 SSDYRSLLIKTIRGIAVRFEEIAANIVSLLLDFI-TDLNSVAANGVIAFVKDVVELYPQL 435
Query: 383 YESIIATLCESLDTLDEPEAKASMIWIIGEYA 414
+I+ L L++++ +A +WI+GEY+
Sbjct: 436 RSNILENLIAKLESVNSAKAYRGALWILGEYS 467
>sp|A0JN39|COPB_BOVIN Coatomer subunit beta OS=Bos taurus GN=COPB1 PE=1 SV=1
Length = 953
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 182/450 (40%), Gaps = 75/450 (16%)
Query: 25 LKKLVYLYLINYAKSQPDL-----AILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 79
+KKL+ ++ K+ PD IL + + KD Q PN IR +R + ++ ++
Sbjct: 74 IKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELL 133
Query: 80 EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-LISDNNPMVVA 138
E L ++ CL+ YVR+ A + + +Y L+ D E + D L+++ +
Sbjct: 134 EPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAP--ELIHDFLVNEKDASCKR 191
Query: 139 NAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSRYKAADARE 195
NA L +++ + L L T +++ +G Q+ I++ + + A+ E
Sbjct: 192 NAFMMLIHADQDRA----------LDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSE 241
Query: 196 AENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPE 255
+ + LQ ++ AV A A LVTL SA
Sbjct: 242 RARFIRCIYNLLQSSSPAVKYEA------------------------AGTLVTLSSAPTA 277
Query: 256 IQ-----YVAL------RNINLIVQRRPTIL----AHE-------IKVFFCKYNDPIYVK 293
I+ Y+ L N+ LIV R L AHE + + + V+
Sbjct: 278 IKAAAQCYIDLIIKESDNNVKLIVLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVR 337
Query: 294 MEKLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAIKLERA 345
+ L++ + L S RN++++++ K+ + D D R+ VR + C+++
Sbjct: 338 KKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDM 397
Query: 346 AERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKAS 405
A I VL+E + + + +++ +R+ N I+ + E + +
Sbjct: 398 AANVIPVLMEFLSDSNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRG 457
Query: 406 MIWIIGEYAERIDNADELLESFLESFPEEP 435
+WI+GEY D+ ++ S E P
Sbjct: 458 ALWILGEYCSTKDDIQSVMTEVRRSLGEIP 487
>sp|P53618|COPB_HUMAN Coatomer subunit beta OS=Homo sapiens GN=COPB1 PE=1 SV=3
Length = 953
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 182/450 (40%), Gaps = 75/450 (16%)
Query: 25 LKKLVYLYLINYAKSQPDL-----AILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 79
+KKL+ ++ K+ PD IL + + KD Q PN IR +R + ++ ++
Sbjct: 74 IKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELL 133
Query: 80 EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-LISDNNPMVVA 138
E L ++ CL+ YVR+ A + + +Y L+ D E + D L+++ +
Sbjct: 134 EPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAP--ELIHDFLVNEKDASCKR 191
Query: 139 NAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSRYKAADARE 195
NA L +++ + L L T +++ +G Q+ I++ + + A+ E
Sbjct: 192 NAFMMLIHADQDRA----------LDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSE 241
Query: 196 AENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPE 255
+ + LQ ++ AV A A LVTL SA
Sbjct: 242 RARFIRCIYNLLQSSSPAVKYEA------------------------AGTLVTLSSAPTA 277
Query: 256 IQ-----YVAL------RNINLIVQRRPTIL----AHE-------IKVFFCKYNDPIYVK 293
I+ Y+ L N+ LIV R L AHE + + + V+
Sbjct: 278 IKAAAQCYIDLIIKESDNNVKLIVLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVR 337
Query: 294 MEKLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAIKLERA 345
+ L++ + L S RN++++++ K+ + D D R+ VR + C+++
Sbjct: 338 KKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDM 397
Query: 346 AERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKAS 405
A I VL+E + + + +++ +R+ N I+ + E + +
Sbjct: 398 AANVIPVLMEFLSDNNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRG 457
Query: 406 MIWIIGEYAERIDNADELLESFLESFPEEP 435
+WI+GEY ++ ++ S E P
Sbjct: 458 ALWILGEYCSTKEDIQSVMTEIRRSLGEIP 487
>sp|Q9JIF7|COPB_MOUSE Coatomer subunit beta OS=Mus musculus GN=Copb1 PE=1 SV=1
Length = 953
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 182/450 (40%), Gaps = 75/450 (16%)
Query: 25 LKKLVYLYLINYAKSQPDL-----AILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 79
+KKL+ ++ K+ PD IL + + KD Q PN IR +R + ++ ++
Sbjct: 74 IKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELL 133
Query: 80 EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-LISDNNPMVVA 138
E L ++ CL+ YVR+ A + + +Y L+ D E + D L+++ +
Sbjct: 134 EPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAP--ELIHDFLVNEKDASCKR 191
Query: 139 NAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSRYKAADARE 195
NA L +++ + L L T +++ +G Q+ I++ + + A+ E
Sbjct: 192 NAFMMLIHADQDRA----------LDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSE 241
Query: 196 AENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPE 255
+ + LQ ++ AV A A LVTL SA
Sbjct: 242 RARFIRCIYNLLQSSSPAVKYEA------------------------AGTLVTLSSAPTA 277
Query: 256 IQ-----YVAL------RNINLIVQRRPTIL----AHE-------IKVFFCKYNDPIYVK 293
I+ Y+ L N+ LIV R L AHE + + + V+
Sbjct: 278 IKAAAQCYIDLIIKESDNNVKLIVLDRLVELKEHPAHERVLQDLVMDILRVLSTPDLEVR 337
Query: 294 MEKLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAIKLERA 345
+ L++ + L S RN++++++ K+ + D D R+ VR + C+++
Sbjct: 338 KKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDM 397
Query: 346 AERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKAS 405
A I VL+E + + + +++ +R+ N I+ + E + +
Sbjct: 398 AANVIPVLMEFLSDSNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRG 457
Query: 406 MIWIIGEYAERIDNADELLESFLESFPEEP 435
+WI+GEY ++ ++ S E P
Sbjct: 458 ALWILGEYCSTKEDIQSVMTEVRRSLGEIP 487
>sp|P23514|COPB_RAT Coatomer subunit beta OS=Rattus norvegicus GN=Copb1 PE=1 SV=1
Length = 953
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 182/450 (40%), Gaps = 75/450 (16%)
Query: 25 LKKLVYLYLINYAKSQPDL-----AILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 79
+KKL+ ++ K+ PD IL + + KD Q PN IR +R + ++ ++
Sbjct: 74 IKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELL 133
Query: 80 EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-LISDNNPMVVA 138
E L ++ CL+ YVR+ A + + +Y L+ D E + D L+++ +
Sbjct: 134 EPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFENLIPDAP--ELIHDFLVNEKDASCKR 191
Query: 139 NAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSRYKAADARE 195
NA L +++ + L L T +++ +G Q+ I++ + + A+ E
Sbjct: 192 NAFMMLIHADQDRA----------LDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSE 241
Query: 196 AENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPE 255
+ + LQ ++ AV A A LVTL SA
Sbjct: 242 RARFIRCIYNLLQSSSPAVKYEA------------------------AGTLVTLSSAPTA 277
Query: 256 IQ-----YVAL------RNINLIVQRRPTIL----AHE-------IKVFFCKYNDPIYVK 293
I+ Y+ L N+ LIV R L AHE + + + V+
Sbjct: 278 IKAAAQCYIDLIIKESDNNVKLIVLDRLVELKEHPAHERVLQDLVMDILRVLSTPDLEVR 337
Query: 294 MEKLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAIKLERA 345
+ L++ + L S RN++++++ K+ + D D R+ VR + C+++
Sbjct: 338 KKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDM 397
Query: 346 AERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKAS 405
A I VL+E + + + +++ +R+ N I+ + E + +
Sbjct: 398 AANVIPVLMEFLSDSNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRG 457
Query: 406 MIWIIGEYAERIDNADELLESFLESFPEEP 435
+WI+GEY ++ ++ S E P
Sbjct: 458 ALWILGEYCSTKEDIQSVMTEVRRSLGEIP 487
>sp|D2SW95|COPB_PIG Coatomer subunit beta OS=Sus scrofa GN=COPB1 PE=2 SV=1
Length = 953
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 182/450 (40%), Gaps = 75/450 (16%)
Query: 25 LKKLVYLYLINYAKSQPDL-----AILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 79
+KKL+ ++ K+ PD IL + + KD Q PN IR +R + ++ ++
Sbjct: 74 IKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELL 133
Query: 80 EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-LISDNNPMVVA 138
E L ++ CL+ YVR+ A + + +Y L+ D E + D L+++ +
Sbjct: 134 EPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAP--ELIHDFLVNEKDASCKR 191
Query: 139 NAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSRYKAADARE 195
NA L +++ + L L T +++ +G Q+ I++ + + A+ E
Sbjct: 192 NAFMMLIHADQDRA----------LDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSE 241
Query: 196 AENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPE 255
+ + LQ ++ AV A A LVTL SA
Sbjct: 242 RARFIRCIYNLLQSSSPAVKYEA------------------------AGTLVTLSSAPTA 277
Query: 256 IQ-----YVAL------RNINLIVQRRPTIL----AHE-------IKVFFCKYNDPIYVK 293
I+ Y+ L N+ LIV R L AHE + + + V+
Sbjct: 278 IKAAAQCYIDLIIKESDNNVKLIVLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVR 337
Query: 294 MEKLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAIKLERA 345
+ L++ + L S RN++++++ K+ + D D R+ VR + C+++
Sbjct: 338 KKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDM 397
Query: 346 AERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKAS 405
A I VL+E + + + +++ +R+ N I+ + E + +
Sbjct: 398 AANVIPVLMEFLSDSNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRG 457
Query: 406 MIWIIGEYAERIDNADELLESFLESFPEEP 435
+WI+GEY ++ ++ S E P
Sbjct: 458 ALWILGEYCSTKEDIQSVMTEVRRSLGEIP 487
>sp|Q5ZIA5|COPB_CHICK Coatomer subunit beta OS=Gallus gallus GN=COPB1 PE=2 SV=1
Length = 953
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/450 (20%), Positives = 182/450 (40%), Gaps = 75/450 (16%)
Query: 25 LKKLVYLYLINYAKSQPDL-----AILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 79
+KKL+ ++ K+ PD IL + + KD Q PN IR +R + ++ ++
Sbjct: 74 IKKLLLVFWEIVPKTTPDGRLLQEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELL 133
Query: 80 EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-LISDNNPMVVA 138
E L ++ CL+ YVR+ A + + +Y L+ D E + D L+++ +
Sbjct: 134 EPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAP--ELIHDFLVNEKDASCKR 191
Query: 139 NAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSRYKAADARE 195
NA L +++ + L L T +++ +G Q+ I++ + + A+ E
Sbjct: 192 NAFMMLIHADQDRA----------LDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSE 241
Query: 196 AENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPE 255
+ + LQ ++ AV A A LVTL SA
Sbjct: 242 RARFIRCIYNLLQSSSPAVKYEA------------------------AGTLVTLSSAPTA 277
Query: 256 IQ-----YVAL------RNINLIVQRRPTIL----AHE-------IKVFFCKYNDPIYVK 293
I+ Y+ L N+ LIV R L +HE + + + V+
Sbjct: 278 IKAAAQCYIDLIIKESDNNVKLIVLDRLVELKEHPSHERVLQDLVMDILRVLSTPDLEVR 337
Query: 294 MEKLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAIKLERA 345
+ L++ + L S RN++++++ K+ + D D R+ VR + C+++
Sbjct: 338 KKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDM 397
Query: 346 AERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKAS 405
A I VL+E + + + +++ +R+ N I+ + E + +
Sbjct: 398 AANVIPVLMEFLSDNNEAAAADVLEFVREAIQRFDNLRPLIVEKMLEVFHAIKSVKIYRG 457
Query: 406 MIWIIGEYAERIDNADELLESFLESFPEEP 435
+WI+GEY ++ ++ S E P
Sbjct: 458 ALWILGEYCSTKEDIQSVMTEVRRSLGEIP 487
>sp|P45437|COPB_DROME Coatomer subunit beta OS=Drosophila melanogaster GN=betaCop PE=2
SV=2
Length = 964
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 177/434 (40%), Gaps = 76/434 (17%)
Query: 21 ENLELKKLVYLYLINYAKSQPDLA-----ILAVNTFVKDSQDPNPLIRALAVRTMGCIRV 75
+N +KKL+ ++ K+ D IL + + KD Q PN +R +R + ++
Sbjct: 68 QNHTIKKLLLIFWEIVPKTSADGKLLQEMILVCDAYRKDLQHPNEFLRGSTLRFLCKLKE 127
Query: 76 DKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDR-----GFLESLKDLIS 130
++ E L ++ CL YVR+ A + + +Y LV D FL++ +D+
Sbjct: 128 PELLEPLMPAIRACLDHRHSYVRRNAVLAIFTIYKNFDWLVPDGPELIASFLDTQQDMSC 187
Query: 131 DNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILDALSRYKA 190
N A L + + R L+ L + +++ +G + L
Sbjct: 188 KRN--------AFLMLLHADQER--------ALNYLASCIDQVHTFGDILQL-------- 223
Query: 191 ADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLL 250
++ + ++ HAN A ++ I + +S++ VR + A L+TL
Sbjct: 224 --------VIVELIYKVCHANPAERSRFIRCIYNLLN--SSSNAVR---YESAGTLITLS 270
Query: 251 SAEPEIQ-----YVAL------RNINLIVQRRPTILA-HE----------IKVFFCKYND 288
A I+ Y+ L N+ LIV R + HE + V
Sbjct: 271 LAPTAIKAAASCYIELVVKESDNNVKLIVLDRLVAMKEHEGMEKVMQDLVMDVLRVLAAP 330
Query: 289 PIYVKMEKLEIMIKLASDRNIDQVLLEFK-EYATEVDVD------FVRKAVRAIGRCAIK 341
I V+ + L + + L RNI +++L K E A +V+ + + VR + C+IK
Sbjct: 331 DIEVRRKTLALALDLVYSRNIGEMVLVLKKEVAKTHNVEHEDTGKYRQLLVRTLHTCSIK 390
Query: 342 LERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPE 401
A I VL+E + + +I I++ +++P II L E+ + +
Sbjct: 391 FPDVAANVIPVLVEFLSDTNELAAADVLIFIREAIQKFPALRALIIEHLIEAFPQIKSSK 450
Query: 402 AKASMIWIIGEYAE 415
+ +WI+GEY E
Sbjct: 451 IHRAAVWILGEYVE 464
>sp|Q5R922|COPB_PONAB Coatomer subunit beta OS=Pongo abelii GN=COPB1 PE=2 SV=1
Length = 953
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 181/450 (40%), Gaps = 75/450 (16%)
Query: 25 LKKLVYLYLINYAKSQPDL-----AILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 79
+KKL+ ++ K+ PD IL + + KD Q PN IR +R + ++ ++
Sbjct: 74 IKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELL 133
Query: 80 EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-LISDNNPMVVA 138
E L ++ CL+ YVR+ A + + +Y L+ D E + D L+ + +
Sbjct: 134 EPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAP--ELIHDFLVDEKDASCKR 191
Query: 139 NAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSRYKAADARE 195
NA L +++ + L L T +++ +G Q+ I++ + + A+ E
Sbjct: 192 NAFMMLIHADQDRA----------LDYLSTCIDQVQTFGDILQLVIVELIYKACHANPSE 241
Query: 196 AENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPE 255
+ + LQ ++ AV A A LVTL SA
Sbjct: 242 RARFIRCIYNLLQSSSPAVKYEA------------------------AGTLVTLSSAPTA 277
Query: 256 IQ-----YVAL------RNINLIVQRRPTIL----AHE-------IKVFFCKYNDPIYVK 293
I+ Y+ L N+ LIV R L AHE + + + V+
Sbjct: 278 IKAAAQCYIDLIIKESDNNVKLIVLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVR 337
Query: 294 MEKLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAIKLERA 345
+ L++ + L S RN++++++ K+ + D D R+ VR + C+++
Sbjct: 338 KKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDM 397
Query: 346 AERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKAS 405
A I VL+E + + + +++ +R+ N I+ + E + +
Sbjct: 398 AANVIPVLMEFLSDNNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRG 457
Query: 406 MIWIIGEYAERIDNADELLESFLESFPEEP 435
+WI+GEY ++ ++ S E P
Sbjct: 458 ALWILGEYCSTKEDIQSVMTEIRRSLGEIP 487
>sp|Q66HV4|COPB_DANRE Coatomer subunit beta OS=Danio rerio GN=copb1 PE=2 SV=1
Length = 953
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 96/453 (21%), Positives = 182/453 (40%), Gaps = 81/453 (17%)
Query: 25 LKKLVYLYLINYAKSQPDLA-----ILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 79
+KKL+ ++ K+ PD IL + + KD Q PN IR +R + ++ ++
Sbjct: 74 IKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKESELL 133
Query: 80 EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-LISDNNPMVVA 138
E L ++ CL+ YVR+ A + + +Y L+ D E + D L+++ +
Sbjct: 134 EPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAP--ELIHDFLVNEKDASCKR 191
Query: 139 NAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSRYKAADARE 195
NA L +++ + L L T +++ +G Q+ I++ + + A+ E
Sbjct: 192 NAFMMLIHADQDRA----------LDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPSE 241
Query: 196 AENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPE 255
+ + LQ ++ AV A A LVTL SA
Sbjct: 242 RARFIRCIYNLLQSSSPAVKYEA------------------------AGTLVTLSSAPTA 277
Query: 256 IQ-----YVAL------RNINLIVQRR-------PTILAHE-------IKVFFCKYNDPI 290
I+ Y+ L N+ LIV R PT HE + + +
Sbjct: 278 IKAAAQCYIDLIIKESDNNVKLIVLDRLIELKEHPT---HERVLQDLVMDILRVLTTPDL 334
Query: 291 YVKMEKLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRK-AVRAIGRCAIKL 342
V+ + L++ + L S RN++++++ K+ + D D R+ VR + C+++
Sbjct: 335 EVRKKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRF 394
Query: 343 ERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEA 402
A I VL+E + + + +++ +R+ N II + E + +
Sbjct: 395 PDMAANVIPVLMEFLSDTNEAAAADVLEFVREAIQRFDNLRPLIIEKMLEVFHAIKTVKI 454
Query: 403 KASMIWIIGEYAERIDNADELLESFLESFPEEP 435
+WI+GEY ++ ++ S E P
Sbjct: 455 YRGALWILGEYCSTKEDIQSVMTEVRRSLGEIP 487
>sp|Q54HL0|COPG_DICDI Coatomer subunit gamma OS=Dictyostelium discoideum GN=copG PE=1
SV=1
Length = 898
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/426 (18%), Positives = 184/426 (43%), Gaps = 49/426 (11%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + +F Q++++ L++L+YL L + D AI+ +++ KD L RA
Sbjct: 63 EATDIFFAATKLFQSKDIPLRRLMYLLLKELSTISQD-AIIVISSLTKDMSHKIELYRAN 121
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESL 125
A+R + I I + ++ + + DP+V A + L + E+V + + +
Sbjct: 122 AIRILCKITDSSILPQIERYFKQSIVEKDPHVSSAALVSSIHLLKVCPEIV--KRWANEV 179
Query: 126 KDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILDAL 185
++ IS+ + MV +A+A L I+++ + ++ S+ + L + + Q +++
Sbjct: 180 QEAISNKSNMVQYHALALLHRIKQHDRLAVSKLVSNLIKNSLR-----SPYAQSYLIRCC 234
Query: 186 SRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMI-----LQQMELITSTDVVRNLCK 240
E E + L+ N V A + I + E+ ++ V++N
Sbjct: 235 VEVIEETNTEDRIFREYIESCLRSKNEMVAYEAARSICTFKNVSNKEINSAVGVLQNF-- 292
Query: 241 KMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKL--- 297
L S +P +++ A+R +N + Q PT + P + ME L
Sbjct: 293 --------LNSTKPTLRFAAVRTLNKLAQTNPTAVI------------PCNLDMENLITD 332
Query: 298 ----------EIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAE 347
++K+ ++ N+++++ + + +++ +F V AI + K + +
Sbjct: 333 TNRSIATLAITTLLKVGNESNVERLIKQIANFLGDINDEFKIVVVDAITSLSQKFPKKYK 392
Query: 348 RCISVLLELIKIKVNYVVQEAII-VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASM 406
I L ++++ + +++A + I + P + E + LC+ ++ D P+ +
Sbjct: 393 HLIIFLNKILRDEGTLQLKQATLDAILTVVNNIPESKEIALTELCDYIEDCDFPDLSVQI 452
Query: 407 IWIIGE 412
+ +IG+
Sbjct: 453 LHLIGQ 458
>sp|Q29G21|COPB_DROPS Coatomer subunit beta OS=Drosophila pseudoobscura pseudoobscura
GN=betaCop PE=3 SV=2
Length = 965
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 163/405 (40%), Gaps = 71/405 (17%)
Query: 45 ILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAIC 104
IL + + KD Q PN +R +R + ++ ++ E L ++ CL YVR+ A +
Sbjct: 96 ILVCDAYRKDLQHPNEFLRGSTLRFLCKLKEPELLEPLMPAIRACLDHRHSYVRRNAVLA 155
Query: 105 VAKLYDINAELVEDR-----GFLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEIT 159
+ +Y LV D FL++ +D+ N A L + + R
Sbjct: 156 IFTIYKNFDWLVPDGPELIANFLDTQQDMSCKRN--------AFLMLLHADQER------ 201
Query: 160 SHTLSKLLTALNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAV 219
L+ L + +++ +G + L ++ + ++ HAN A +
Sbjct: 202 --ALNYLASCIDQVHSFGDILQL----------------VIVELIYKVCHANPAERSRFI 243
Query: 220 KMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQ-----YVAL------RNINLIV 268
+ I + +S++ VR + A L+TL A I+ Y+ L N+ LIV
Sbjct: 244 RCIYNLLN--SSSNAVR---YESAGTLITLSLAPTAIKAAASCYIELIVKESDNNVKLIV 298
Query: 269 QRRPTILAHE-----------IKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFK 317
R + + V I V+ + L + + L RNI +++L K
Sbjct: 299 LDRLIAMKENENMEKVMQDLVMDVLRVLAAPDIEVRRKALALAMDLVYSRNIGEMVLVLK 358
Query: 318 -EYATEVDVD------FVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII 370
E A +V+ + + VR + C+IK A I VL+E + + +I
Sbjct: 359 KEVAKTHNVEHEDTGKYRQLLVRTLHTCSIKFPDVAATVIPVLVEFLSDTNELAAADVLI 418
Query: 371 VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAE 415
I++ +++P II L E+ + + + +WI+GEY E
Sbjct: 419 FIREAIQKFPALSGLIIEHLIEAFPQIKSSKIHRAAVWILGEYVE 463
>sp|Q865S1|AP3D1_BOVIN AP-3 complex subunit delta-1 OS=Bos taurus GN=AP3D1 PE=1 SV=2
Length = 1207
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 88/475 (18%), Positives = 193/475 (40%), Gaps = 39/475 (8%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+S +++ M K++ YL D+ +L N KD P+
Sbjct: 68 LGYDISWAAFNIIEVMSASKFTFKRIGYLAASQCFHEGTDVIMLTTNQIRKDLSSPSQYD 127
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFL 122
+A+ + C + L + + + PY+RK A + + K++ E + R
Sbjct: 128 TGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPESL--RPAF 185
Query: 123 ESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFIL 182
LK+ + D +P V + AV + E+ + + + KL+T+ W + I+
Sbjct: 186 PRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAP-LFFKLMTS--STNNWVLIKII 242
Query: 183 DALSRYKAADAREAENIVERVTPRLQHANCAVVL------SAVKMILQQMELITSTDVVR 236
+ R + ++E +T L H+ A+ L + + +++ + +
Sbjct: 243 KLFGALTPLEPRLGKKLIEPLT-NLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSASI 301
Query: 237 NLC-KKMAPPLVTLLSAEPEIQYVALRNINLIVQRRP-TILAHEIKVFFCKYNDPIYVKM 294
LC +K+ + + ++ ++Y+ L ++ I++ P ++ AH+ V C + +++
Sbjct: 302 QLCVQKLR---ILIEDSDQNLKYLGLLAMSKILRTHPKSVQAHKDLVLQCLDDKDESIRL 358
Query: 295 EKLEIMIKLASDRNIDQVLLEFKEYATEVDV--------DFVRKAVRAIGRCAIKLERAA 346
L+++ + S +N+ +++ K+ T VD + + K + + +
Sbjct: 359 RALDLLYGMVSKKNLMEIV---KKLMTHVDKAEGTTYRDELLTKIIDICSQSNYQHITNF 415
Query: 347 ERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDT----LDEPEA 402
E IS+L+EL +++ + D+ R +A + LD+ P+
Sbjct: 416 EWYISILVELTRLEGTRHGHLIAAQMLDVAIRVKAIRRFAVAQMSALLDSAHLVASSPQR 475
Query: 403 KA------SMIWIIGEYAERIDNADELLESFLE-SFPEEPAQVQLQLLTATVKLF 450
+ WI GE++E + + LE+ L P +Q + VKL+
Sbjct: 476 SGICEVLYAAAWICGEFSEHLQEPQQTLEAMLRPKVTTLPGHIQAVYVQNVVKLY 530
>sp|P54362|AP3D_DROME AP-3 complex subunit delta OS=Drosophila melanogaster GN=g PE=1
SV=4
Length = 1034
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 92/481 (19%), Positives = 201/481 (41%), Gaps = 51/481 (10%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+S +++ M + K++ YL +L +L N KD N
Sbjct: 69 LGYDISWAGFNIIEVMSSSRFTCKRIGYLAASQCFHPDSELLMLTTNMIRKDLNSQNQYD 128
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFL 122
+A+ + C ++ L + + + PY+R A + + K++ E + R
Sbjct: 129 AGVALSGLSCFISPDLSRDLANDIMTLMSSTKPYLRMKAVLMMYKVFLRYPEAL--RPAF 186
Query: 123 ESLKDLISDNNPMVVANAVAALAEIEENSSR------PIFEITSHTLSKLLTALNECTEW 176
LK+ + D +P V + AV + E+ + + PIF KL+T W
Sbjct: 187 PKLKEKLEDPDPGVQSAAVNVICELARKNPKNYLPLAPIF-------FKLMTT--STNNW 237
Query: 177 GQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVL------SAVKMILQQMELIT 230
+ I+ + R + ++E +T L H+ A+ L + + +++ +
Sbjct: 238 MLIKIIKLFGALTPLEPRLGKKLIEPLT-NLIHSTSAMSLLYECINTVIAVLISISSGMP 296
Query: 231 STDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRP-TILAHEIKVFFCKYNDP 289
+ LC + L+ ++ ++Y+ L ++ I++ P ++ AH+ + C +
Sbjct: 297 NHSASIQLCVQKLRILIE--DSDQNLKYLGLLAMSKILKTHPKSVQAHKDLILACLDDKD 354
Query: 290 IYVKMEKLEIMIKLASDRNIDQVL------LEFKEYATEVDVDFVRKAVRAIGRCAIKLE 343
+++ L+++ + S +N+ +++ +E E + D + + K + + +
Sbjct: 355 ESIRLRALDLLYGMVSKKNLMEIVKRLLGHMERAEGSAYRD-ELLYKVIEICAQSSYLYV 413
Query: 344 RAAERCISVLLELIKIKVNY----VVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDE 399
E ++VL+ELI+++ ++ E ++ D+ R P + + + LDT
Sbjct: 414 TNFEWYLTVLVELIQLEAGSRHGRLIAEQLL---DVAIRVPVVRQFAVNEMTNLLDTFTV 470
Query: 400 PEAKASM-------IWIIGEYAERIDNADELLESFLESFPE-EPAQVQLQLLTATVKLFL 451
SM WI+GE+A +++A++ L L P P +Q + +KLF
Sbjct: 471 SAQSNSMYEVLYAAAWIVGEFAGELEDAEKTLNILLR--PRLLPGHIQGVYVQNVIKLFA 528
Query: 452 K 452
+
Sbjct: 529 R 529
>sp|Q29N38|AP2A_DROPS AP-2 complex subunit alpha OS=Drosophila pseudoobscura
pseudoobscura GN=alpha-Adaptin PE=3 SV=1
Length = 939
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 92/457 (20%), Positives = 188/457 (41%), Gaps = 54/457 (11%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ + DL L + + D Q NP+
Sbjct: 67 LGHDIDFGHMEAVNLLSSNKYSEKQIGYLFISVLVNTNSDLIRLIIQSIKNDLQSRNPVH 126
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA++ + I + E + + + L D V+++AA+C+ +L+ + +++
Sbjct: 127 VNLALQCIANIGSRDMAESFSNEIPKLLVSGDTMDVVKQSAALCLLRLFRSSPDIIPGGE 186
Query: 121 FLESLKDLISDNNPMVVANAVA---ALAEIEENSSRPIFEITSHTLSKLLTA----LNEC 173
+ + L++D + VV A + AL + + + + LS+++TA L +
Sbjct: 187 WTSRIIHLLNDQHMGVVTAATSLIDALVKCNPDEYKGCVNLAVSRLSRIVTASYTDLQDY 246
Query: 174 T------EWGQVFILDALSRYKAADAREA---------ENIVERV-----TPRLQHANC- 212
T W V +L L Y E I+ + + ++QH+N
Sbjct: 247 TYYFVPAPWLSVKLLRLLQNYNPVTEEAGVRARLNETLETILNKAQEPPKSKKVQHSNAK 306
Query: 213 -AVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSA-EPEIQYVALRNINLIVQ- 269
AV+ A+ +I+ +D NL + L LS E ++Y+AL ++ +
Sbjct: 307 NAVLFEAINLIIH-------SDSEPNLLVRACNQLGQFLSNRETNLRYLALESMCHLATS 359
Query: 270 --RRPTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVD 326
+ H E+ + K + V+ ++++ + N ++++ E Y D
Sbjct: 360 EFSHEEVKKHQEVVILSMKMEKDVSVRQMAVDLLYAMCDRGNAEEIVQEMLNYLETADYS 419
Query: 327 FVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRRYPNTYES 385
+ V + A K + V+L LI+I +YV +E VI+ + R E
Sbjct: 420 IREEMVLKVAILAEKYATDYTWYVDVILNLIRIAGDYVSEEVWYRVIQIVINR-----EE 474
Query: 386 IIATLCES-LDTLDEPEAKASMI----WIIGEYAERI 417
+ ++ + L P +M+ +I+GE+ I
Sbjct: 475 VQGYAAKTVFEALQAPACHENMVKVGGYILGEFGNLI 511
>sp|P91926|AP2A_DROME AP-2 complex subunit alpha OS=Drosophila melanogaster
GN=alpha-Adaptin PE=1 SV=1
Length = 940
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 92/457 (20%), Positives = 188/457 (41%), Gaps = 54/457 (11%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ + DL L + + D Q NP+
Sbjct: 67 LGHDIDFGHMEAVNLLSSNKYSEKQIGYLFISVLVNTNSDLIRLIIQSIKNDLQSRNPVH 126
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA++ + I + E + + + L D V+++AA+C+ +L+ + +++
Sbjct: 127 VNLALQCIANIGSRDMAESFSNEIPKLLVSGDTMDVVKQSAALCLLRLFRSSPDIIPGGE 186
Query: 121 FLESLKDLISDNNPMVVANAVA---ALAEIEENSSRPIFEITSHTLSKLLTA----LNEC 173
+ + L++D + VV A + AL + + + + LS+++TA L +
Sbjct: 187 WTSRIIHLLNDQHMGVVTAATSLIDALVKRNPDEYKGCVNLAVSRLSRIVTASYTDLQDY 246
Query: 174 T------EWGQVFILDALSRYKAADAREA---------ENIVERV-----TPRLQHANC- 212
T W V +L L Y E I+ + + ++QH+N
Sbjct: 247 TYYFVPAPWLSVKLLRLLQNYNPVTEEAGVRARLNETLETILNKAQEPPKSKKVQHSNAK 306
Query: 213 -AVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSA-EPEIQYVALRNINLIVQ- 269
AV+ A+ +I+ +D NL + L LS E ++Y+AL ++ +
Sbjct: 307 NAVLFEAINLIIH-------SDSEPNLLVRACNQLGQFLSNRETNLRYLALESMCHLATS 359
Query: 270 --RRPTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVD 326
+ H E+ + K + V+ ++++ + N ++++ E Y D
Sbjct: 360 EFSHEEVKKHQEVVILSMKMEKDVSVRQMAVDLLYAMCDRGNAEEIVQEMLNYLETADYS 419
Query: 327 FVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRRYPNTYES 385
+ V + A K + V+L LI+I +YV +E VI+ + R E
Sbjct: 420 IREEMVLKVAILAEKYATDYTWYVDVILNLIRIAGDYVSEEVWYRVIQIVINR-----EE 474
Query: 386 IIATLCES-LDTLDEPEAKASMI----WIIGEYAERI 417
+ ++ + L P +M+ +I+GE+ I
Sbjct: 475 VQGYAAKTVFEALQAPACHENMVKVGGYILGEFGNLI 511
>sp|Q8H852|COPG1_ORYSJ Coatomer subunit gamma-1 OS=Oryza sativa subsp. japonica
GN=Os03g0227000 PE=2 SV=2
Length = 884
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/428 (19%), Positives = 184/428 (42%), Gaps = 36/428 (8%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + +F V Q+++ L++LVYL + + S D I+ ++ +KD + RA
Sbjct: 66 EATEVFFAVTKLFQSKDAGLRRLVYLMIKELSPSS-DEVIIVTSSLMKDMNSKTDMYRAN 124
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLK----DDDPYVRKTAAICVAKLYDINAELVEDRGF 121
A+R + C +D L ++R LK D +P V A + L N E+V + +
Sbjct: 125 AIRVL-CRIIDGT---LLTQIERYLKQAIVDKNPVVASAALVSGIHLLQANPEIV--KRW 178
Query: 122 LESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSH-TLSKLLTALNECTEWGQVF 180
+++ + +V + +A L +I +N I ++ S T + + L +C
Sbjct: 179 SNEVQEAVQSRFALVQFHGLALLHQIRQNDRLAISKMVSGLTRGSVRSPLAQCL------ 232
Query: 181 ILDALSRYKAADAREAE-NIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLC 239
L RY + RE+ N P + + + +IL+ I DV
Sbjct: 233 ----LIRYTSQVIRESSMNTQTSDRPFFDYLESCLRHKSEMVILEAARKIAEMDVT---S 285
Query: 240 KKMAPPLVTLL----SAEPEIQYVALRNINLIVQRRPTILAH---EIKVFFCKYNDPIYV 292
+++AP + L S++P +++ A+R +N + RP + + +++ N I
Sbjct: 286 RELAPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTRPLAVTNCNVDLESLMSDQNRSIAT 345
Query: 293 KMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISV 352
+ ++K ++ ++D+++ + + +++ +F V AI +K ++
Sbjct: 346 L--AITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSMMNF 403
Query: 353 LLELIKIKVNYVVQEAII-VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIG 411
L ++ + + ++AI+ I + P+ E + LCE ++ + + ++ ++G
Sbjct: 404 LSNSLREEGGFEYKKAIVDSIVTLISEIPDAKEIGLLYLCEFIEDCEFTYLSSQILHLLG 463
Query: 412 EYAERIDN 419
R +
Sbjct: 464 NEGPRTSD 471
>sp|Q7QG73|AP2A_ANOGA AP-2 complex subunit alpha OS=Anopheles gambiae GN=alpha-Adaptin
PE=3 SV=4
Length = 934
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 91/457 (19%), Positives = 186/457 (40%), Gaps = 54/457 (11%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ + DL L + + D Q NP+
Sbjct: 67 LGHDIDFGHMEAVNLLSSNKYSEKQIGYLFISVLVNTNSDLIKLIIQSIKNDLQSRNPIH 126
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA++ + I + E + + + L D V+++AA+C+ +L+ +++
Sbjct: 127 VNLALQCIANIGSQDMAEAFSNEIPKLLVSGDTMDVVKQSAALCLLRLFRTCPDIIPGGE 186
Query: 121 FLESLKDLISDNNPMVVANAVA---ALAEIEENSSRPIFEITSHTLSKLLTA----LNEC 173
+ + L++D + VV A + AL + + + LS+++TA L +
Sbjct: 187 WTSRIIHLLNDQHMGVVTAATSLIDALVKKNPEEYKGCVSLAVSRLSRIVTASYTDLQDY 246
Query: 174 T------EWGQVFILDALSRYKAADAREA---------ENIVERV-----TPRLQHANC- 212
T W V +L L Y E I+ + + ++QH+N
Sbjct: 247 TYYFVPAPWLSVKLLRLLQNYNPPTEDPGVRGRLNECLETILNKAQEPPKSKKVQHSNAK 306
Query: 213 -AVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSA-EPEIQYVALRNINLIVQR 270
AV+ A+ +I+ D +L + L LS E ++Y+AL ++ +
Sbjct: 307 NAVLFEAINLIIH-------NDSEPSLLVRACNQLGQFLSNRETNLRYLALESMCHLATS 359
Query: 271 RPTILA----HEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVD 326
+ A E+ + K + V+ + ++++ + N ++++ E Y D
Sbjct: 360 EFSHEAVKKHQEVVILSMKMEKDVSVRQQAVDLLYAMCDRSNAEEIVQEMLNYLETADYS 419
Query: 327 FVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRRYPNTYES 385
+ V + A K + V+L LI+I +YV +E VI+ + R E
Sbjct: 420 IREEMVLKVAILAEKYATDYTWYVDVILNLIRIAGDYVSEEVWYRVIQIVINR-----EE 474
Query: 386 IIATLCES-LDTLDEPEAKASMI----WIIGEYAERI 417
+ ++ + L P +M+ +I+GE+ I
Sbjct: 475 VQGYAAKTVFEALQAPACHENMVKVGGYILGEFGNLI 511
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 156,346,937
Number of Sequences: 539616
Number of extensions: 5905780
Number of successful extensions: 17977
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 17731
Number of HSP's gapped (non-prelim): 176
length of query: 478
length of database: 191,569,459
effective HSP length: 121
effective length of query: 357
effective length of database: 126,275,923
effective search space: 45080504511
effective search space used: 45080504511
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)