Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>011748
MAEPHKERNTEAPEPMARPVGGTEYSWCKAVPTGTGITVLALLLSKHPNIQLLQTALNNL
QNNHPILRSKLHSSADAKTFSFITPPEPHIQIQHFDISSTSQTISDKTGAVSPFQLILEH
ELNRNTWTNPSHQSNTNSDSNLFNVSIYTPSETQWVVTLRLHTSICDRASAAAVSKELLR
LMTGREEGGIEKEYDRKGEVSLGIEEFIPSGKANKPFWARGVDMLGYSLNSLRLSNISFV
DADSPRFSQVLRLQLNRDETGRLVEGCKSRGIKLCGALAAAGLIAARSTKYFPSHQREKY
AVVTLVDCRSILEPVLSDDYLGFYHSAILNTHDVNGEEELWELATRSYTSFANAKNSDKH
FTDMNDLNFLMCKAIDNPGLTPASSLRTAVISVFEDPIVDETNKLHQEIGLEDYIGCSSV
HGVGPSIAIFDTIRDGWLDCACVYPSPLHSREQLQQLIDDMKKILVEGGSFGDGETGE

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  011748
        (478 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2083183 - symbol:AT3G52610 "AT3G52610" species...  1236  7.8e-126  1


>TAIR|locus:2083183 [details] [associations]
            symbol:AT3G52610 "AT3G52610" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AY142492
            IPI:IPI00534759 PIR:T08438 RefSeq:NP_566970.1 UniGene:At.1731
            UniGene:At.51378 ProteinModelPortal:Q8H1S5 PaxDb:Q8H1S5
            PRIDE:Q8H1S5 DNASU:824427 EnsemblPlants:AT3G52610.1 GeneID:824427
            KEGG:ath:AT3G52610 TAIR:At3g52610 eggNOG:NOG243477
            HOGENOM:HOG000029797 InParanoid:Q8H1S5 OMA:WELAKRC PhylomeDB:Q8H1S5
            ProtClustDB:CLSN2689130 Genevestigator:Q8H1S5 Uniprot:Q8H1S5
        Length = 475

 Score = 1236 (440.2 bits), Expect = 7.8e-126, P = 7.8e-126
 Identities = 248/479 (51%), Positives = 329/479 (68%)

Query:     1 MAEPHKERNTEAPEPMARPVGGTEYSWCKAVPTGTGITVLALLLSKHPNIXXXXXXXXXX 60
             M+EP++      P+ M RPVGGTEYSWC+A+  GTGI V+ALLLS+ P +          
Sbjct:     1 MSEPNR-----VPKSMTRPVGGTEYSWCRAIDGGTGIAVIALLLSRTPKLQNLQNTLDKL 55

Query:    61 XXXHPILRSKLHSSADAKTFSFI--TPPEPHIQIQHFDISSTSQTISDKTG-AVSPFQLI 117
                HP LRS +   A A +FSF+  +  + H++I  FD  ST+Q I D       P ++I
Sbjct:    56 QIYHPTLRSNIRFDASANSFSFVVTSAADSHVEIHPFDSVSTAQIIRDSDDPCADPHRII 115

Query:   118 LEHELNRNTWTNPSHQSNTNSDSNLFNVSIY--TPSETQWVVTLRLHTSICDRASAAAVS 175
             LEHE+N+NTW NP H+    S+S +F VS+Y  T    Q ++T RL+T+  DR +A  + 
Sbjct:   116 LEHEMNKNTWINP-HRW-IKSESRVFIVSLYDLTDDGEQRILTFRLNTAAVDRTAAVTLL 173

Query:   176 KELLRLMTGREEGGIEKEYDRKGEVSLG--IEEFIPSGKANKPFWARGVDMLGYSLNSLR 233
             +E ++       G        +  V LG  IEE IPSGK +KPFWARG+D+LGYSLN+ R
Sbjct:   174 REFMKETAADGFGNGPVVAATETAVGLGKAIEELIPSGKGDKPFWARGIDVLGYSLNAFR 233

Query:   234 LSNISFVDAD-SPRFSQVLRLQLNRDETGRLVEGCKSRGIKLCXXXXXXXXXXXRSTKYF 292
              SN++FVDA+ S R SQ++RL+L+RD+T +LV GCK+RG+KL             S+K  
Sbjct:   234 FSNLNFVDAENSNRRSQLVRLKLDRDQTLKLVAGCKARGLKLWAALASSALIAAYSSKNL 293

Query:   293 PSHQREKYAVVTLVDCRSILEPVLSDDYLGFYHSAILNTHDVNGEEELWELATRSYTSFA 352
             P +Q EKYAVVTL DCRSILEP L+ +  GFYH+ IL+THD+ GEE+LW+LA R Y SF 
Sbjct:   294 PPYQGEKYAVVTLSDCRSILEPPLTSNDFGFYHAGILHTHDLTGEEKLWDLAKRCYDSFT 353

Query:   353 NAKNSDKHFTDMNDLNFLMCKAIDNPGLTPASSLRTAVISVFEDPIVDETNKLH-QEIGL 411
             ++KNS+K FTDM+DLNFLMCKAI+NP LTP+SSLRTA IS+FEDP++DE+ +     +G+
Sbjct:   354 SSKNSNKQFTDMSDLNFLMCKAIENPNLTPSSSLRTAFISIFEDPVIDESPEPELASLGV 413

Query:   412 EDYIGCSSVHGVGPSIAIFDTIRDGWLDCACVYPSPLHSREQLQQLIDDMKKILVEGGS 470
             +DYIGC+S+HGVGPS+A+FD +RDG LDCA VYPSPLHSREQ+  LI  MK IL+EG +
Sbjct:   414 QDYIGCASIHGVGPSVAVFDALRDGKLDCAFVYPSPLHSREQMDGLIQHMKTILLEGSA 472


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.133   0.397    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      478       454   0.00093  118 3  11 22  0.42    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  619 (66 KB)
  Total size of DFA:  291 KB (2151 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  39.74u 0.09s 39.83t   Elapsed:  00:00:01
  Total cpu time:  39.74u 0.09s 39.83t   Elapsed:  00:00:01
  Start:  Sat May 11 11:00:12 2013   End:  Sat May 11 11:00:13 2013

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