Query 011749
Match_columns 478
No_of_seqs 321 out of 1649
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 14:32:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011749.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011749hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 7.4E-62 2.5E-66 505.9 27.4 329 131-476 5-398 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 3E-57 1E-61 470.3 28.7 323 134-478 9-394 (403)
3 3psg_A Pepsinogen; hydrolase(a 100.0 5.3E-55 1.8E-59 448.4 32.4 294 135-477 46-370 (370)
4 1tzs_A Cathepsin E; hydrolase, 100.0 2.3E-54 7.9E-59 440.7 31.6 298 135-478 13-343 (351)
5 3c9x_A Trichoderma reesei aspa 100.0 1.5E-54 5.2E-59 438.2 28.3 288 145-476 12-329 (329)
6 2apr_A Rhizopuspepsin; hydrola 100.0 2.8E-54 9.6E-59 435.6 30.2 286 145-477 12-324 (325)
7 1mpp_A Pepsin; hydrolase(acid 100.0 1.3E-54 4.5E-59 444.0 28.1 304 132-478 5-356 (361)
8 1dpj_A Proteinase A; proteinas 100.0 6.5E-54 2.2E-58 433.5 31.1 293 136-477 4-329 (329)
9 2x0b_A Renin; hydrolase-hormon 100.0 2E-54 6.8E-59 445.6 27.0 293 136-477 52-383 (383)
10 1oew_A Endothiapepsin; hydrola 100.0 2.5E-54 8.5E-59 436.7 26.9 286 146-476 13-329 (329)
11 3cms_A Chymosin B; hydrolase, 100.0 2.4E-54 8.2E-59 435.7 26.4 290 136-477 5-323 (323)
12 1htr_B Gastricsin; aspartyl pr 100.0 6.4E-54 2.2E-58 433.6 27.2 291 137-477 5-329 (329)
13 1am5_A Pepsin, acid proteinase 100.0 6.5E-54 2.2E-58 432.6 26.8 289 136-477 3-324 (324)
14 4aa9_A Chymosin; hydrolase, as 100.0 1.4E-53 4.9E-58 429.1 26.0 290 138-477 4-320 (320)
15 1j71_A Candidapepsin, aspartic 100.0 1.7E-53 5.7E-58 431.5 26.0 288 135-478 3-325 (334)
16 2qzx_A Candidapepsin-5; aspart 100.0 1.8E-53 6.2E-58 432.5 26.0 291 135-478 3-332 (342)
17 3fv3_A SAPP1P-secreted asparti 100.0 9.9E-53 3.4E-57 426.4 28.1 289 135-478 3-330 (339)
18 1t6e_X Xylanase inhibitor; two 100.0 6.6E-53 2.2E-57 434.6 26.0 310 135-477 3-373 (381)
19 3k1w_A Renin; protease, altern 100.0 7.9E-53 2.7E-57 427.3 26.1 296 133-477 6-340 (341)
20 1qdm_A Prophytepsin; aspartic 100.0 4.2E-52 1.5E-56 439.5 32.1 306 136-477 43-478 (478)
21 1miq_A Plasmepsin; aspartic pr 100.0 1.2E-52 4.3E-57 431.5 26.3 291 135-477 52-374 (375)
22 1ibq_A Aspergillopepsin; aspar 100.0 3.5E-52 1.2E-56 420.2 28.9 284 146-477 12-325 (325)
23 2bju_A Plasmepsin II; aspartic 100.0 2.2E-52 7.4E-57 438.0 25.5 292 135-477 128-450 (453)
24 1izd_A Aspartic proteinase; su 100.0 5.5E-52 1.9E-56 418.5 27.0 282 146-477 13-323 (323)
25 3pvk_A Candidapepsin-2; hydrol 100.0 4.6E-52 1.6E-56 421.8 26.0 290 135-478 3-332 (342)
26 1bxo_A Protein (penicillopepsi 100.0 3.8E-52 1.3E-56 419.6 22.9 282 146-477 13-323 (323)
27 1yg9_A Aspartic protease BLA G 100.0 1.2E-51 4.2E-56 417.2 26.5 290 135-477 7-329 (330)
28 2ewy_A Beta-secretase 2; BACE2 100.0 2.3E-51 7.7E-56 423.2 26.9 300 147-478 12-356 (383)
29 2qp8_A Beta-secretase 1; BACE1 100.0 3.3E-51 1.1E-55 423.7 25.8 300 147-478 20-368 (395)
30 3qvc_A Histo-aspartic protease 100.0 5.5E-51 1.9E-55 427.6 26.4 289 135-477 127-449 (451)
31 1wkr_A Polyporopepsin; hydrola 100.0 5.5E-50 1.9E-54 406.5 27.9 286 136-478 4-334 (340)
32 3vf3_A Beta-secretase 1; struc 100.0 8.5E-50 2.9E-54 414.1 27.3 301 147-478 27-375 (402)
33 3lpj_A Beta-secretase 1; alzhe 100.0 2.7E-49 9.3E-54 416.7 27.0 300 147-478 73-421 (455)
34 1b5f_A Protein (cardosin A); h 100.0 3.9E-39 1.3E-43 311.2 20.0 210 136-380 4-238 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 1.4E-35 4.8E-40 286.2 23.6 214 240-477 1-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.8 8.4E-20 2.9E-24 150.9 8.3 82 136-240 4-95 (97)
37 1b5f_B Protein (cardosin A); h 99.6 2.2E-16 7.7E-21 127.6 8.1 79 392-477 3-87 (87)
38 2i1a_A DNA damage-inducible pr 91.2 0.48 1.6E-05 40.8 7.1 108 322-474 25-134 (148)
39 3s8i_A Protein DDI1 homolog 1; 90.4 0.5 1.7E-05 41.1 6.4 108 323-475 24-134 (148)
40 1fmb_A EIAV protease; hydrolas 83.8 1 3.6E-05 36.6 4.2 26 150-177 9-34 (104)
41 2hs1_A HIV-1 protease; ultra-h 82.5 1.5 5E-05 35.4 4.5 27 151-179 10-36 (99)
42 3ec0_A Protease; HIV-2, inhibi 78.7 2.5 8.5E-05 34.0 4.6 27 151-179 10-36 (99)
43 2i1a_A DNA damage-inducible pr 77.5 2 6.9E-05 36.7 4.2 30 147-178 24-53 (148)
44 3liy_A Protease; hydrolase, hy 74.3 2.9 9.8E-05 34.4 3.9 31 151-181 12-45 (116)
45 2hah_A Protease, retropepsin; 74.1 2.9 9.8E-05 34.7 3.9 26 150-178 15-40 (116)
46 3sqf_A Protease; folded monome 66.7 5.8 0.0002 32.6 4.2 28 151-180 11-38 (114)
47 3s8i_A Protein DDI1 homolog 1; 65.4 5.4 0.00018 34.4 4.0 31 147-179 22-52 (148)
48 1lya_A Cathepsin D; lysosomal 57.7 13 0.00045 29.3 4.7 40 312-369 5-44 (97)
49 3slz_A GAG-Pro-POL polyprotein 54.8 11 0.00038 31.8 4.0 29 149-179 22-50 (132)
50 2rsp_A RSV protease; hydrolase 50.9 12 0.0004 31.3 3.4 23 156-180 27-49 (124)
51 3ka2_A [L-Ala51;Gly51']HIV-1 p 50.3 13 0.00046 33.7 4.0 27 150-178 9-35 (203)
52 3ka2_A [L-Ala51;Gly51']HIV-1 p 31.0 41 0.0014 30.4 4.0 28 150-179 113-140 (203)
53 1b5f_A Protein (cardosin A); h 28.6 49 0.0017 30.2 4.3 40 312-369 5-44 (239)
54 1bxo_A Protein (penicillopepsi 28.6 55 0.0019 31.3 4.8 31 321-369 14-44 (323)
55 1izd_A Aspartic proteinase; su 28.1 57 0.002 31.2 4.9 32 321-370 14-45 (323)
56 3aup_A SBG7S, BG, basic 7S glo 26.5 57 0.002 32.3 4.7 43 310-369 10-52 (403)
57 1ibq_A Aspergillopepsin; aspar 26.1 60 0.0021 31.1 4.6 32 321-370 13-44 (325)
58 1j71_A Candidapepsin, aspartic 25.2 60 0.002 31.2 4.4 39 312-369 5-43 (334)
59 3fv3_A SAPP1P-secreted asparti 25.2 60 0.002 31.2 4.4 40 311-369 4-43 (339)
60 3cms_A Chymosin B; hydrolase, 24.5 76 0.0026 30.3 5.0 42 310-369 4-45 (323)
61 1mpp_A Pepsin; hydrolase(acid 23.9 71 0.0024 31.0 4.7 41 309-369 7-49 (361)
62 2qzx_A Candidapepsin-5; aspart 23.7 83 0.0028 30.2 5.1 39 312-369 5-43 (342)
63 1wkr_A Polyporopepsin; hydrola 23.4 69 0.0023 30.8 4.4 39 311-368 4-42 (340)
64 2apr_A Rhizopuspepsin; hydrola 22.3 75 0.0026 30.4 4.5 31 321-369 14-46 (325)
65 1am5_A Pepsin, acid proteinase 21.7 91 0.0031 29.7 4.9 40 312-369 4-43 (324)
66 1dpj_A Proteinase A; proteinas 21.3 98 0.0033 29.5 5.0 41 311-369 4-44 (329)
67 3pvk_A Candidapepsin-2; hydrol 21.2 79 0.0027 30.3 4.4 33 321-369 11-43 (342)
68 3c9x_A Trichoderma reesei aspa 20.5 1.1E+02 0.0037 29.2 5.2 31 321-369 14-46 (329)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=7.4e-62 Score=505.88 Aligned_cols=329 Identities=24% Similarity=0.465 Sum_probs=277.4
Q ss_pred cccceeeccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCCCccCCCCCCCCCCCCCCccccCCCCccc
Q 011749 131 EAEEIQGPIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCADCYQQADPIFEPTSSSSYSPLTCNTKQC 210 (478)
Q Consensus 131 ~~~~~~~p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C 210 (478)
..+.+.+||..+. .+++|+++|.||||||++.|+|||||+++||+|++| .+|+||+.++|.++.|
T Consensus 5 ~~~~~~~pv~~d~--~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c-------------~~Sst~~~v~C~s~~C 69 (413)
T 3vla_A 5 RPSALVVPVKKDA--STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN-------------YVSSTYRPVRCRTSQC 69 (413)
T ss_dssp CCSEEEEEEEECT--TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS-------------CCCTTCEECBTTSHHH
T ss_pred CCccEEEEeeecC--CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC-------------CCCCCcCccCCCcccc
Confidence 3557889999884 589999999999999999999999999999999875 3799999999999999
Q ss_pred CCCCCC-----------CcCCCCceeEEEcC-CCcEE-------EEEEC---------CeeeeeeEEEEEEcC--CCCcc
Q 011749 211 QSLDES-----------ECRNNTCLYEVSYG-DGSYT-------TVTLG---------SASVDNIAIGCGHNN--EGLFV 260 (478)
Q Consensus 211 ~~~~~~-----------~C~~~~c~y~~~Yg-dgs~~-------tltlg---------~~~v~~~~fGc~~~~--~g~~~ 260 (478)
...... .|.++.|.|.+.|+ ||+.+ +|+|+ +..++++.|||++.+ .+.+.
T Consensus 70 ~~~~~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~ 149 (413)
T 3vla_A 70 SLSGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLAS 149 (413)
T ss_dssp HHTTCCEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCT
T ss_pred cccccCCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCccc
Confidence 876532 35556799999994 76554 88886 257899999999986 46666
Q ss_pred CCCeEEecCCCCCCcccccC-----CCeeEEEeeCCCCCCceEEEeCCCCC--------C-C-CeeeecccCCCC-----
Q 011749 261 GAAGLLGLGGGLLSFPSQIN-----ASTFSYCLVDRDSDSTSTLEFDSSLP--------P-N-AVTAPLLRNHEL----- 320 (478)
Q Consensus 261 ~~~GIlGLg~~~~S~~sql~-----~~~FS~cL~~~~~~~~g~L~fG~~d~--------~-~-~~~tpl~~~~~~----- 320 (478)
.++||||||++.+|+++||. .++|||||++. ....|.|+||+.+. . + +.||||+.++..
T Consensus 150 ~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~-~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~ 228 (413)
T 3vla_A 150 GVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGS-TSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATS 228 (413)
T ss_dssp TCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSC-SSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSC
T ss_pred ccccccccCCCCcchHHHHhhhcCCCceEEEeCCCC-CCCceEEEECCCcccccccccccCCceeEeecccCCccccccc
Confidence 78999999999999999987 48999999763 34579999999874 1 4 999999987532
Q ss_pred -----CeeEEEEEeEEEEcCeEeecCCcccccccCCCCcEEEccCcceeeecHHHHHHHHHHHHhhcc--CCCCCCCccc
Q 011749 321 -----DTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTR--ALSPTDGVAL 393 (478)
Q Consensus 321 -----~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~--~~~~~~~~~~ 393 (478)
..+|+|+|++|+||++.+.++++.|.++.++++++||||||++++||+++|++|+++|.+++. .++...+...
T Consensus 229 ~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~ 308 (413)
T 3vla_A 229 TQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAP 308 (413)
T ss_dssp CTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTT
T ss_pred cccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCC
Confidence 279999999999999999999999988777788999999999999999999999999998764 3444344445
Q ss_pred cccccccCCCCc----cccceEEEEeCC-CcEEEeCCCceEEEecCCCcEEEEEEeCC---CCceEecHhhhcceEEEEe
Q 011749 394 FDTCYDFSSRSS----VEVPTVSFHFPE-GKVLPLPAKNFLIPVDSNGTFCFAFAPTS---SSLSIIGNVQQQGTRVSFN 465 (478)
Q Consensus 394 ~~~C~~~~~~~~----~~~P~l~f~f~g-g~~~~l~~~~yl~~~~~~~~~Cl~~~~~~---~~~~IlG~~fl~~~yvvfD 465 (478)
++.||+.++... ..+|+|+|+|.| ++.|+|++++|+++.+ ++.+|++|...+ ++.||||++|||++|+|||
T Consensus 309 ~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~-~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD 387 (413)
T 3vla_A 309 FGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIN-DNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFD 387 (413)
T ss_dssp CSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEE-TTEEEECEEEEESSCSSSEEECHHHHTTEEEEEE
T ss_pred CcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeC-CCcEEEEEEecCCCcccceeEehhhhcCeEEEEE
Confidence 678998764432 479999999955 4899999999999876 467899987653 2579999999999999999
Q ss_pred CCCCEEEEeeC
Q 011749 466 LRNSLVGFTPN 476 (478)
Q Consensus 466 ~~~~rIGFa~~ 476 (478)
++++|||||++
T Consensus 388 ~~~~riGfa~~ 398 (413)
T 3vla_A 388 LATSRVGFSGT 398 (413)
T ss_dssp TTTTEEEEEEE
T ss_pred CCCCEEEEEEe
Confidence 99999999985
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=3e-57 Score=470.26 Aligned_cols=323 Identities=22% Similarity=0.404 Sum_probs=254.0
Q ss_pred ceeeccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCCCccCCCCCCCCCCCCCCccccCCCCcccCCC
Q 011749 134 EIQGPIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCADCYQQADPIFEPTSSSSYSPLTCNTKQCQSL 213 (478)
Q Consensus 134 ~~~~p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~ 213 (478)
.+..|+..+ ..+++|+++|.||||+|++.|+|||||+++||+|.+| .+|+||+.+.|.++.|...
T Consensus 9 ~~~~pl~~~--~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~-------------~~Sst~~~~~C~s~~C~~~ 73 (403)
T 3aup_A 9 LVVLPVQND--GSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ-------------YSSKTYQAPFCHSTQCSRA 73 (403)
T ss_dssp CEEEEEEEC--TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC-------------CCCSSCBCCCTTBHHHHHT
T ss_pred cEEEeeecC--CCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC-------------CCCCCCCccCCCCccccCc
Confidence 467888853 3578999999999999999999999999999998864 4799999999999989765
Q ss_pred CC-----------CCcCCCCceeEEEcC-CCcEE-------EEEECC-----------eeeeeeEEEEEEcCC---CCcc
Q 011749 214 DE-----------SECRNNTCLYEVSYG-DGSYT-------TVTLGS-----------ASVDNIAIGCGHNNE---GLFV 260 (478)
Q Consensus 214 ~~-----------~~C~~~~c~y~~~Yg-dgs~~-------tltlg~-----------~~v~~~~fGc~~~~~---g~~~ 260 (478)
.. ..|.++.|.|.+.|+ ||+.. +|+|++ ..++++.|||++... +.+.
T Consensus 74 ~~~~c~~c~~~~~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~ 153 (403)
T 3aup_A 74 NTHQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPR 153 (403)
T ss_dssp TCCCEEECSSSCBTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSST
T ss_pred cccCccccCCCCCCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCC
Confidence 42 246556799999998 66544 889976 789999999999863 4445
Q ss_pred CCCeEEecCCCCCCcccccC-----CCeeEEEeeCCCCCCceEEEeCCCCC-------C-----CCeeeecccCCCCCee
Q 011749 261 GAAGLLGLGGGLLSFPSQIN-----ASTFSYCLVDRDSDSTSTLEFDSSLP-------P-----NAVTAPLLRNHELDTF 323 (478)
Q Consensus 261 ~~~GIlGLg~~~~S~~sql~-----~~~FS~cL~~~~~~~~g~L~fG~~d~-------~-----~~~~tpl~~~~~~~~~ 323 (478)
..+||||||++.+|+++|++ .++|||||.+. ....|.|+||+ |+ . ++.|+|++.++ ..+
T Consensus 154 ~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~-~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~--~~~ 229 (403)
T 3aup_A 154 NTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRY-PTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITL--QGE 229 (403)
T ss_dssp TCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSC-TTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECT--TSC
T ss_pred CCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCC-CCCCeeEEECC-CchhccccccccccCceeecccccCC--CCc
Confidence 68999999999999998876 58999999764 34579999998 52 1 78999999864 369
Q ss_pred EEEEEeEEEEcCeEe-ecCCcccccccCCCCcEEEccCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCC
Q 011749 324 YYLGLTGISVGGDLL-PISETAFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSS 402 (478)
Q Consensus 324 y~v~l~gIsVgg~~l-~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 402 (478)
|+|.|++|+||++.+ .++...+.++..+.+++||||||++++||+++|++|+++|.+++..++.......++.|++.+.
T Consensus 230 y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~~c~~ 309 (403)
T 3aup_A 230 YNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNK 309 (403)
T ss_dssp EEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEECGGG
T ss_pred ceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceEECCC
Confidence 999999999999999 7887778777777889999999999999999999999999876644333222222345665432
Q ss_pred CCccccceEEEEeCCC--cEEEeCCCceEEEecCCCcEEEEEEeCCC---CceEecHhhhcceEEEEeCCCCEEEE----
Q 011749 403 RSSVEVPTVSFHFPEG--KVLPLPAKNFLIPVDSNGTFCFAFAPTSS---SLSIIGNVQQQGTRVSFNLRNSLVGF---- 473 (478)
Q Consensus 403 ~~~~~~P~l~f~f~gg--~~~~l~~~~yl~~~~~~~~~Cl~~~~~~~---~~~IlG~~fl~~~yvvfD~~~~rIGF---- 473 (478)
. ..+|+|+|+|.|+ ++|+|++++|+++.. ++..|++|++.+. +.||||+.|||++|+|||++++||||
T Consensus 310 ~--~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~-~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~A~~ 386 (403)
T 3aup_A 310 I--NAYPSVDLVMDKPNGPVWRISGEDLMVQAQ-PGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSS 386 (403)
T ss_dssp C--CCCCCEEEEESSTTCCEEEECHHHHEEEC----CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEEESSC
T ss_pred c--CcCCcEEEEEcCCCceEEEEcccceEEEcC-CCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEEeccc
Confidence 1 2689999999655 699999999999865 4678999987643 57999999999999999999999999
Q ss_pred ---eeCCC
Q 011749 474 ---TPNKC 478 (478)
Q Consensus 474 ---a~~~C 478 (478)
++++|
T Consensus 387 ~~~~~~~C 394 (403)
T 3aup_A 387 LHSHGVKC 394 (403)
T ss_dssp GGGGTCCG
T ss_pred ccccCCCc
Confidence 66666
No 3
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=5.3e-55 Score=448.39 Aligned_cols=294 Identities=25% Similarity=0.442 Sum_probs=245.8
Q ss_pred eeeccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCCCccCCCCCCCCCCCCCCccccCCCCcccCCCC
Q 011749 135 IQGPIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCADCYQQADPIFEPTSSSSYSPLTCNTKQCQSLD 214 (478)
Q Consensus 135 ~~~p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~ 214 (478)
...|+.+. .+.+|+++|.||||||++.|+|||||+++||+|..|..|.++.++.|||++|+||+...
T Consensus 46 ~~~~l~n~---~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~~~y~~~~SsT~~~~~---------- 112 (370)
T 3psg_A 46 GDEPLENY---LDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATS---------- 112 (370)
T ss_dssp CCCTTGGG---TTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE----------
T ss_pred ceecceec---cCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCCCCCCCccCcCcEECC----------
Confidence 44577653 47899999999999999999999999999999999998777789999999999999875
Q ss_pred CCCcCCCCceeEEEcCCCcEE------EEEECCeeeeeeEEEEEEcCCCC-c--cCCCeEEecCCCCCCccc--------
Q 011749 215 ESECRNNTCLYEVSYGDGSYT------TVTLGSASVDNIAIGCGHNNEGL-F--VGAAGLLGLGGGLLSFPS-------- 277 (478)
Q Consensus 215 ~~~C~~~~c~y~~~Ygdgs~~------tltlg~~~v~~~~fGc~~~~~g~-~--~~~~GIlGLg~~~~S~~s-------- 277 (478)
|.|.+.|++|+.. +|++++..++++.|||++...+. | ...+||||||++.++...
T Consensus 113 --------~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l 184 (370)
T 3psg_A 113 --------QELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDNL 184 (370)
T ss_dssp --------EEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHHHH
T ss_pred --------cEEEEEeCCceEEEEEEEEEEeeCCcccCCeEEEEEEeecccccccCCccceeccCCccccccCCCCHHHHH
Confidence 8999999999966 99999999999999999988764 2 247999999998876432
Q ss_pred --c--cCCCeeEEEeeCCCCCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCccccccc
Q 011749 278 --Q--INASTFSYCLVDRDSDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDE 349 (478)
Q Consensus 278 --q--l~~~~FS~cL~~~~~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~ 349 (478)
| +..++||+||.+. ....|.|+||++|+. ++.|+|+.. ..+|.|.|++|+||++.+..
T Consensus 185 ~~qg~i~~~~FS~~L~~~-~~~~G~l~fGg~D~~~y~g~l~~~pv~~----~~~w~v~l~~i~v~g~~~~~--------- 250 (370)
T 3psg_A 185 WDQGLVSQDLFSVYLSSN-DDSGSVVLLGGIDSSYYTGSLNWVPVSV----EGYWQITLDSITMDGETIAC--------- 250 (370)
T ss_dssp HHTTCSSSSEEEEEEC------CEEEEETCCCGGGBSSCCEEEECSE----ETTEEEEECEEESSSSEEEC---------
T ss_pred HHCCCCCCCEEEEEEccC-CCCCeEEEEEeeChHhcCCcceeecccc----cceeEEEEeEEEECCEEEec---------
Confidence 2 4479999999754 345799999999986 899999987 47899999999999987753
Q ss_pred CCCCcEEEccCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCCCCccccceEEEEeCCCcEEEeCCCceE
Q 011749 350 SGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNFL 429 (478)
Q Consensus 350 ~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~~~~l~~~~yl 429 (478)
.++..+||||||++++||++++++|.+++.+.. ...+.+.+ +|.... .+|+|+|+| +|++++||+++|+
T Consensus 251 ~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~----~~~g~~~v-~C~~~~-----~lP~i~f~~-~g~~~~l~~~~yi 319 (370)
T 3psg_A 251 SGGCQAIVDTGTSLLTGPTSAIANIQSDIGASE----NSDGEMVI-SCSSID-----SLPDIVFTI-DGVQYPLSPSAYI 319 (370)
T ss_dssp TTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEE----CTTCCEEC-CGGGGG-----GCCCEEEEE-TTEEEEECHHHHE
T ss_pred CCCceEEEcCCCCcEECCHHHHHHHHHHhCCcc----cCCCcEEE-ECCCcc-----cCCcEEEEE-CCEEEEECHHHhc
Confidence 234679999999999999999999999996542 22344444 588654 689999999 8999999999999
Q ss_pred EEecCCCcEEE-EEEeCC-----CCceEecHhhhcceEEEEeCCCCEEEEeeCC
Q 011749 430 IPVDSNGTFCF-AFAPTS-----SSLSIIGNVQQQGTRVSFNLRNSLVGFTPNK 477 (478)
Q Consensus 430 ~~~~~~~~~Cl-~~~~~~-----~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 477 (478)
++ . + ..|+ +|.+.+ +..||||++|||++|+|||++++|||||+++
T Consensus 320 ~~-~-~-~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 320 LQ-D-D-DSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp EE-C-S-SCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred cc-C-C-CEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 98 3 2 3598 676632 3369999999999999999999999999975
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.3e-54 Score=440.70 Aligned_cols=298 Identities=25% Similarity=0.424 Sum_probs=244.8
Q ss_pred eeeccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCCCccCCCCCCCCCCCCCCccccCCCCcccCCCC
Q 011749 135 IQGPIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCADCYQQADPIFEPTSSSSYSPLTCNTKQCQSLD 214 (478)
Q Consensus 135 ~~~p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~ 214 (478)
...|+.+ ..+++|+++|.||||+|++.|+|||||+++||+|.+|..+.+..++.|||++|+||+...
T Consensus 13 ~~~~l~n---~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~---------- 79 (351)
T 1tzs_A 13 AKEPLIN---YLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTHSRFQPSQSSTYSQPG---------- 79 (351)
T ss_dssp -CCTTGG---GSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCBCCS----------
T ss_pred cceecee---cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCCCCcCCcccCcceEECC----------
Confidence 4567765 346899999999999999999999999999999999983223467899999999999865
Q ss_pred CCCcCCCCceeEEEcCCCcEE------EEEECCeeeeeeEEEEEEcCCCC-c--cCCCeEEecCCCCCCcc---------
Q 011749 215 ESECRNNTCLYEVSYGDGSYT------TVTLGSASVDNIAIGCGHNNEGL-F--VGAAGLLGLGGGLLSFP--------- 276 (478)
Q Consensus 215 ~~~C~~~~c~y~~~Ygdgs~~------tltlg~~~v~~~~fGc~~~~~g~-~--~~~~GIlGLg~~~~S~~--------- 276 (478)
|.|.+.|++|+.. +|+|++..++++.|||++...+. | ...+||||||++.++..
T Consensus 80 --------~~~~i~Yg~Gs~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l 151 (351)
T 1tzs_A 80 --------QSFSIQYGTGSLSGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNM 151 (351)
T ss_dssp --------CEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHH
T ss_pred --------CEEEEEeCCCCeEEEEEEeEEEECCeEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHH
Confidence 8999999999866 89999999999999999988764 2 25799999999887643
Q ss_pred -cc--cCCCeeEEEeeCCCC-CCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCcccccc
Q 011749 277 -SQ--INASTFSYCLVDRDS-DSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKID 348 (478)
Q Consensus 277 -sq--l~~~~FS~cL~~~~~-~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~ 348 (478)
+| +..++||+||.+... ...|.|+||++|+. ++.|+|+.. ..+|.|.|++|+||++.+..
T Consensus 152 ~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~-------- 219 (351)
T 1tzs_A 152 MAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTK----QAYWQIALDNIQVGGTVMFC-------- 219 (351)
T ss_dssp HHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSE----ETTEEEEEEEEEETTEEEEC--------
T ss_pred HHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCC----CceEEEEeCEEEECCceEEc--------
Confidence 22 447999999976432 12699999999975 799999986 46899999999999988642
Q ss_pred cCCCCcEEEccCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCCCCccccceEEEEeCCCcEEEeCCCce
Q 011749 349 ESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNF 428 (478)
Q Consensus 349 ~~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~~~~l~~~~y 428 (478)
.....+||||||++++||+++|++|.+++.+... . +.+.+ +|+... .+|+|+|+| +|++|+|++++|
T Consensus 220 -~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~----~-g~~~~-~C~~~~-----~~P~i~f~f-~g~~~~i~~~~y 286 (351)
T 1tzs_A 220 -SEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPV----D-GEYAV-ECANLN-----VMPDVTFTI-NGVPYTLSPTAY 286 (351)
T ss_dssp -TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC----S-SSEEE-CGGGGG-----GSCCEEEEE-TTEEEEECTTTS
T ss_pred -CCCceEEeccCCcceeCCHHHHHHHHHHhCCccc----C-CeEEE-eCCCCc-----cCCcEEEEE-CCEEEEECHHHh
Confidence 2345799999999999999999999999965431 1 33444 598754 689999999 899999999999
Q ss_pred EEEecCC-CcEEE-EEEeC-----CCCceEecHhhhcceEEEEeCCCCEEEEeeCCC
Q 011749 429 LIPVDSN-GTFCF-AFAPT-----SSSLSIIGNVQQQGTRVSFNLRNSLVGFTPNKC 478 (478)
Q Consensus 429 l~~~~~~-~~~Cl-~~~~~-----~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~C 478 (478)
+++.... +..|+ +|.+. ..+.||||+.|||++|+|||++++|||||+++|
T Consensus 287 i~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~ 343 (351)
T 1tzs_A 287 TLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVP 343 (351)
T ss_dssp EECC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC-
T ss_pred EeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCc
Confidence 9876422 35798 68764 246799999999999999999999999999987
No 5
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.5e-54 Score=438.21 Aligned_cols=288 Identities=23% Similarity=0.392 Sum_probs=241.9
Q ss_pred CCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCCCccCCCCCCCCCCCCCCccccCCCCcccCCCCCCCcCCCCce
Q 011749 145 QGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCADCYQQADPIFEPTSSSSYSPLTCNTKQCQSLDESECRNNTCL 224 (478)
Q Consensus 145 ~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~~~C~~~~c~ 224 (478)
..+++|+++|.||||+|++.|+|||||+++||+|.+|..|.++.++.|||++|+||+.++| |.
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~~~~~y~~~~SsT~~~~~~-----------------~~ 74 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSATGHAIYTPSKSSTSKKVSG-----------------AS 74 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCGGGCTTCEECTT-----------------CB
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccCCCCcCCcccCcCceEcCC-----------------Ce
Confidence 3578999999999999999999999999999999999999888899999999999998753 89
Q ss_pred eEEEcCCCcEE-------EEEECCeeeeeeEEEEEEcCCCCc---cCCCeEEecCCCCCCcc-------------cccCC
Q 011749 225 YEVSYGDGSYT-------TVTLGSASVDNIAIGCGHNNEGLF---VGAAGLLGLGGGLLSFP-------------SQINA 281 (478)
Q Consensus 225 y~~~Ygdgs~~-------tltlg~~~v~~~~fGc~~~~~g~~---~~~~GIlGLg~~~~S~~-------------sql~~ 281 (478)
|.+.|+||+.. +|+|++..++++.|||++...+.| ...+||||||++.++.. +|+..
T Consensus 75 ~~i~Yg~Gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~i~~ 154 (329)
T 3c9x_A 75 WSISYGDGSSSSGDVYTDKVTIGGFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASSLAE 154 (329)
T ss_dssp EEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHTTSSS
T ss_pred EEEEeCCCCcEEEEEEEEEEEECCEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHHHhcCC
Confidence 99999999843 899999999999999999876654 35799999999877653 24668
Q ss_pred CeeEEEeeCCCCCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCcccccccCCCCcEEE
Q 011749 282 STFSYCLVDRDSDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIV 357 (478)
Q Consensus 282 ~~FS~cL~~~~~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~~~~ii 357 (478)
++||+||.+ ...|.|+||++|+. ++.|+|+..+ ..+|.|.|++|+||++.+. . ....+||
T Consensus 155 ~~FS~~l~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~v~~~~~~--~--------~~~~aii 218 (329)
T 3c9x_A 155 PLFTADLRH---GQNGSYNFGYIDTSVAKGPVAYTPVDNS---QGFWEFTASGYSVGGGKLN--R--------NSIDGIA 218 (329)
T ss_dssp SEEEEECCS---SSCEEEEESSCCGGGCSSCEEEEECBCT---TSSCEEEECCEEETTCCCC--S--------CCEEEEE
T ss_pred CEEEEEecC---CCCcEEEEeCcChhhcccceEEEEccCC---CceEEEEEeeEEECCEecc--C--------CCceEEE
Confidence 999999964 24699999999975 7999999853 4689999999999998653 1 2357999
Q ss_pred ccCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCCCCccccceEEEEeCCCcEEEeCCCceEEEecCC-C
Q 011749 358 DSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNFLIPVDSN-G 436 (478)
Q Consensus 358 DSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~~~~l~~~~yl~~~~~~-~ 436 (478)
||||++++||+++|++|.+++.+.. .....+.+.+ +|+. .+|+|+|+| +|++++||+++|+++...+ .
T Consensus 219 DSGTt~~~lp~~~~~~i~~~i~~a~--~~~~~~~~~~-~C~~-------~~P~i~f~f-~g~~~~ip~~~~~~~~~~~~~ 287 (329)
T 3c9x_A 219 DTGTTLLLLDDNVVDAYYANVQSAQ--YDNQQEGVVF-DCDE-------DLPSFSFGV-GSSTITIPGDLLNLTPLEEGS 287 (329)
T ss_dssp CTTCCSEEECHHHHHHHHTTCTTCE--EETTTTEEEE-ETTC-------CCCCEEEEE-TTEEEEECGGGGEEEESSTTC
T ss_pred ECCCCcEeCCHHHHHHHHHhCCCcE--EcCCCCEEEE-ECCC-------CCCcEEEEE-CCEEEEECHHHeeeeccCCCC
Confidence 9999999999999999998874332 1122233444 5983 589999999 7999999999999876432 3
Q ss_pred cEEEE-EEeCC-CCceEecHhhhcceEEEEeCCCCEEEEeeC
Q 011749 437 TFCFA-FAPTS-SSLSIIGNVQQQGTRVSFNLRNSLVGFTPN 476 (478)
Q Consensus 437 ~~Cl~-~~~~~-~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~ 476 (478)
..|++ |.+.+ .+.||||+.|||++|+|||++++|||||+.
T Consensus 288 ~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 288 STCFGGLQSSSGIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp SEEEESEEECTTTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred CeEEEEEEcCCCCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 78995 77654 468999999999999999999999999974
No 6
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=2.8e-54 Score=435.57 Aligned_cols=286 Identities=22% Similarity=0.369 Sum_probs=239.9
Q ss_pred CCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCCCccCCCCCCCCCCCCCCccccCCCCcccCCCCCCCcCCCCce
Q 011749 145 QGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCADCYQQADPIFEPTSSSSYSPLTCNTKQCQSLDESECRNNTCL 224 (478)
Q Consensus 145 ~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~~~C~~~~c~ 224 (478)
..+++|+++|.||||+|++.|+|||||+++||+|.+|..| ++.++.|||++|+||+... |.
T Consensus 12 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~~~~~~y~~~~SsT~~~~~------------------~~ 72 (325)
T 2apr_A 12 GNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-GSGQTKYDPNQSSTYQADG------------------RT 72 (325)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-CTTSCCBCGGGCTTCEEEE------------------EE
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-hcCCCCCCcccCCCeeeCC------------------CE
Confidence 4578999999999999999999999999999999999999 7889999999999999853 89
Q ss_pred eEEEcCCCcEE-------EEEECCeeeeeeEEEEEEcCCCCcc--CCCeEEecCCCCCCcc-------c----c--cCCC
Q 011749 225 YEVSYGDGSYT-------TVTLGSASVDNIAIGCGHNNEGLFV--GAAGLLGLGGGLLSFP-------S----Q--INAS 282 (478)
Q Consensus 225 y~~~Ygdgs~~-------tltlg~~~v~~~~fGc~~~~~g~~~--~~~GIlGLg~~~~S~~-------s----q--l~~~ 282 (478)
|.+.|+||+.. +|++++..++++.|||++...+.|. ..+||||||++.++.. . | +..+
T Consensus 73 ~~i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~ 152 (325)
T 2apr_A 73 WSISYGDGSSASGILAKDNVNLGGLLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRP 152 (325)
T ss_dssp EEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSS
T ss_pred EEEEECCCCCEEEEEEEEEEEECCEEECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCHHHHHHhcCCCCCc
Confidence 99999999843 8999999999999999998766543 3899999999877643 2 2 5579
Q ss_pred eeEEEeeCCCCCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCcccccccCCCCcEEEc
Q 011749 283 TFSYCLVDRDSDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVD 358 (478)
Q Consensus 283 ~FS~cL~~~~~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~~~~iiD 358 (478)
+||+||.+......|.|+||++|+. ++.|+|+... ..+|.|.|++|+||+ .+. .....+|||
T Consensus 153 ~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~vg~-~~~----------~~~~~~iiD 218 (325)
T 2apr_A 153 IFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNS---RGWWGITVDRATVGT-STV----------ASSFDGILD 218 (325)
T ss_dssp EEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCT---TSSCEEEECEEEETT-EEE----------ECCEEEEEC
T ss_pred eEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCC---CCEEEEEEeEEEECC-Eec----------CCCceEEEe
Confidence 9999996533345799999999975 7999999753 468999999999999 332 123578999
Q ss_pred cCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCCCCccccceEEEEeCCCcEEEeCCCceEEEecCCCcE
Q 011749 359 SGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNFLIPVDSNGTF 438 (478)
Q Consensus 359 SGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~~~~l~~~~yl~~~~~~~~~ 438 (478)
|||++++||+++|+++++++.+.+... +.+.+ +|+. ..+|+|+|+| +|.+++||+++|+++.. +..
T Consensus 219 SGTs~~~lP~~~~~~~~~~~~~~~~~~----g~~~~-~C~~------~~~p~i~f~f-~g~~~~ip~~~~~~~~~--~~~ 284 (325)
T 2apr_A 219 TGTTLLILPNNIAASVARAYGASDNGD----GTYTI-SCDT------SAFKPLVFSI-NGASFQVSPDSLVFEEF--QGQ 284 (325)
T ss_dssp TTCSSEEEEHHHHHHHHHHHTCEECSS----SCEEE-CSCG------GGCCCEEEEE-TTEEEEECGGGGEEEEE--TTE
T ss_pred cCCccEECCHHHHHHHHHHHhcccCCC----CeEEE-ECCC------CCCCcEEEEE-CCEEEEECHHHEEEcCC--CCe
Confidence 999999999999999999997765321 33444 5974 1489999999 56699999999998754 568
Q ss_pred EEE-EEeCCCCceEecHhhhcceEEEEeCCCCEEEEeeCC
Q 011749 439 CFA-FAPTSSSLSIIGNVQQQGTRVSFNLRNSLVGFTPNK 477 (478)
Q Consensus 439 Cl~-~~~~~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 477 (478)
|++ |.+.+.+.||||+.|||++|+|||++++|||||+++
T Consensus 285 C~~~i~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 285 CIAGFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp EEESEEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEEEEEcCCCCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 985 565545689999999999999999999999999874
No 7
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.3e-54 Score=444.01 Aligned_cols=304 Identities=20% Similarity=0.342 Sum_probs=252.1
Q ss_pred ccceeeccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCC---CccCCCCCCCCCCCCCCccccCCCCc
Q 011749 132 AEEIQGPIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCA---DCYQQADPIFEPTSSSSYSPLTCNTK 208 (478)
Q Consensus 132 ~~~~~~p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~---~C~~~~~~~fdps~SsT~~~~~C~s~ 208 (478)
++....|+.. ..+++|+++|.||||+|++.|+|||||+++||+|.+|. .|. .++.|||++|+||+...
T Consensus 5 g~~~~~~l~~---~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~--~~~~y~~~~SsT~~~~~---- 75 (361)
T 1mpp_A 5 GSVDTPGLYD---FDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCV--GKRFFDPSSSSTFKETD---- 75 (361)
T ss_dssp CCEEEEEEEE---TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCC--SSCCBCGGGCTTCEEEE----
T ss_pred CccceEEeec---CCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCC--CCCcCCCccCCceEecC----
Confidence 3345567765 34689999999999999999999999999999999998 675 57899999999999875
Q ss_pred ccCCCCCCCcCCCCceeEEEcCCCcEE------EEEECCeeeeeeEEEEEEcCCC------Cc--cCCCeEEecCCCCCC
Q 011749 209 QCQSLDESECRNNTCLYEVSYGDGSYT------TVTLGSASVDNIAIGCGHNNEG------LF--VGAAGLLGLGGGLLS 274 (478)
Q Consensus 209 ~C~~~~~~~C~~~~c~y~~~Ygdgs~~------tltlg~~~v~~~~fGc~~~~~g------~~--~~~~GIlGLg~~~~S 274 (478)
|.|.+.|++|+.. +|+|++..++++.|||++...+ .| ...+||||||++.++
T Consensus 76 --------------~~~~i~Yg~Gs~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s 141 (361)
T 1mpp_A 76 --------------YNLNITYGTGGANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNT 141 (361)
T ss_dssp --------------EEEEEECSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGS
T ss_pred --------------CeEEEEECCceEEEEEEEEEEEECCEEEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccc
Confidence 8999999999866 8999999999999999998765 23 247999999998776
Q ss_pred ccc----------------c--cCCCeeEEEeeCCCCCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEE
Q 011749 275 FPS----------------Q--INASTFSYCLVDRDSDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGIS 332 (478)
Q Consensus 275 ~~s----------------q--l~~~~FS~cL~~~~~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIs 332 (478)
... | +..++||+||.+. ...|.|+||++|+. ++.|+|+........+|.|.|++|+
T Consensus 142 ~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~ 219 (361)
T 1mpp_A 142 AMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTN--DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVK 219 (361)
T ss_dssp HHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCS--SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEE
T ss_pred cccccccccCCCHHHHHHHcCCCCCcEEEEEecCC--CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEE
Confidence 532 2 4479999999753 34699999999975 7999999886432348999999999
Q ss_pred EcCeEeecCCcccccccCCCCcEE-EccCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCCCCcccc-ce
Q 011749 333 VGGDLLPISETAFKIDESGNGGII-VDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEV-PT 410 (478)
Q Consensus 333 Vgg~~l~i~~~~~~~~~~~~~~~i-iDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~-P~ 410 (478)
|+++.+.++ ....+| |||||++++||+++|++|++++.+.. +...+.+.+ +|+... .+ |+
T Consensus 220 v~~~~~~~~---------~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~---~~~~g~~~~-~C~~~~-----~~~p~ 281 (361)
T 1mpp_A 220 IDGSDAVSF---------DGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDA---TESQQGYTV-PCSKYQ-----DSKTT 281 (361)
T ss_dssp ETTEEEEEE---------EEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTC---EEETTEEEE-EHHHHT-----TCCCE
T ss_pred ECCeeeccC---------CCCEEEEECCCCCceeCCHHHHHHHHHHhCCcc---cCCCCcEEE-ECCCcc-----cCCCc
Confidence 999887532 135689 99999999999999999999996542 222333334 598754 57 99
Q ss_pred EEEEeC-C-----CcEEEeCCCceEEEecCCCcEEE-EEEeCCCCceEecHhhhcceEEEEeCCCCEEEEeeCCC
Q 011749 411 VSFHFP-E-----GKVLPLPAKNFLIPVDSNGTFCF-AFAPTSSSLSIIGNVQQQGTRVSFNLRNSLVGFTPNKC 478 (478)
Q Consensus 411 l~f~f~-g-----g~~~~l~~~~yl~~~~~~~~~Cl-~~~~~~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~C 478 (478)
|+|+|. + |++|+|++++|+++....+..|+ +|.+..++.||||+.|||++|+|||++++|||||+++|
T Consensus 282 i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~ 356 (361)
T 1mpp_A 282 FSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLAS 356 (361)
T ss_dssp EEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEESSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCT
T ss_pred EEEEEEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeCCCCCEEEChHHhccEEEEEECCCCEEEEEEccc
Confidence 999993 4 89999999999998653356898 88875556899999999999999999999999999998
No 8
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=6.5e-54 Score=433.50 Aligned_cols=293 Identities=21% Similarity=0.431 Sum_probs=243.5
Q ss_pred eeccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCCCccCCCCCCCCCCCCCCccccCCCCcccCCCCC
Q 011749 136 QGPIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCADCYQQADPIFEPTSSSSYSPLTCNTKQCQSLDE 215 (478)
Q Consensus 136 ~~p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~ 215 (478)
++|+.+. .+++|+++|.||||+|++.|+|||||+++||+|.+|..|.+..++.|||++|+||+...
T Consensus 4 ~~~l~~~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~----------- 69 (329)
T 1dpj_A 4 DVPLTNY---LNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSKYDHEASSSYKANG----------- 69 (329)
T ss_dssp EEECEEE---TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE-----------
T ss_pred ceeeeec---CCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCcCcCCcccCcCeEECC-----------
Confidence 4677652 36899999999999999999999999999999999997333456899999999998854
Q ss_pred CCcCCCCceeEEEcCCCcEE------EEEECCeeeeeeEEEEEEcCCC-Cc--cCCCeEEecCCCCCCcc----------
Q 011749 216 SECRNNTCLYEVSYGDGSYT------TVTLGSASVDNIAIGCGHNNEG-LF--VGAAGLLGLGGGLLSFP---------- 276 (478)
Q Consensus 216 ~~C~~~~c~y~~~Ygdgs~~------tltlg~~~v~~~~fGc~~~~~g-~~--~~~~GIlGLg~~~~S~~---------- 276 (478)
|.|.+.|++|+.. +|+|++..++++.|||++...+ .| ...+||||||++.++..
T Consensus 70 -------~~~~i~Yg~Gs~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~ 142 (329)
T 1dpj_A 70 -------TEFAIQYGTGSLEGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAI 142 (329)
T ss_dssp -------EEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHH
T ss_pred -------cEEEEEECCceEEEEEEEEEEEECCeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHH
Confidence 8999999999765 8999999999999999998776 22 35799999999888754
Q ss_pred cc--cCCCeeEEEeeCCC--CCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCcccccc
Q 011749 277 SQ--INASTFSYCLVDRD--SDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKID 348 (478)
Q Consensus 277 sq--l~~~~FS~cL~~~~--~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~ 348 (478)
+| +..++||+||.+.. ....|.|+||++|+. ++.|+|+.. ..+|.|.|++|+||++.+..
T Consensus 143 ~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~-------- 210 (329)
T 1dpj_A 143 QQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRR----KAYWEVKFEGIGLGDEYAEL-------- 210 (329)
T ss_dssp HTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSS----BTTBEEEEEEEEETTEEEEC--------
T ss_pred hcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCC----CceEEEEeeeEEECCeEecC--------
Confidence 23 45799999997542 223699999999976 789999976 46899999999999988752
Q ss_pred cCCCCcEEEccCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCCCCccccceEEEEeCCCcEEEeCCCce
Q 011749 349 ESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNF 428 (478)
Q Consensus 349 ~~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~~~~l~~~~y 428 (478)
.+..+||||||++++||+++|++|++++.+. ....+.+.+ +|+... .+|+|+|+| +|++++|++++|
T Consensus 211 --~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~----~~~~g~~~~-~C~~~~-----~~P~i~f~f-~g~~~~i~~~~y 277 (329)
T 1dpj_A 211 --ESHGAAIDTGTSLITLPSGLAEMINAEIGAK----KGWTGQYTL-DCNTRD-----NLPDLIFNF-NGYNFTIGPYDY 277 (329)
T ss_dssp --SSCEEEECTTCSCEEECHHHHHHHHHHHTCE----ECTTSSEEE-CGGGGG-----GCCCEEEEE-TTEEEEECTTTS
T ss_pred --CCccEEeeCCCCcEECCHHHHHHHHHHhCCc----cCCCCeEEE-ECCCCC-----cCCcEEEEE-CCEEEEECHHHh
Confidence 2457999999999999999999999999653 122333334 487543 689999999 789999999999
Q ss_pred EEEecCCCcEEE-EEEeC-----CCCceEecHhhhcceEEEEeCCCCEEEEeeCC
Q 011749 429 LIPVDSNGTFCF-AFAPT-----SSSLSIIGNVQQQGTRVSFNLRNSLVGFTPNK 477 (478)
Q Consensus 429 l~~~~~~~~~Cl-~~~~~-----~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 477 (478)
+++.+ ..|+ +|.+. .++.||||+.|||++|+|||++++|||||+++
T Consensus 278 ~~~~~---~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 278 TLEVS---GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp EEEET---TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EecCC---CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 99864 5798 78764 24579999999999999999999999999975
No 9
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=2e-54 Score=445.61 Aligned_cols=293 Identities=22% Similarity=0.384 Sum_probs=246.7
Q ss_pred eeccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCC----CccCCCCCCCCCCCCCCccccCCCCcccC
Q 011749 136 QGPIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCA----DCYQQADPIFEPTSSSSYSPLTCNTKQCQ 211 (478)
Q Consensus 136 ~~p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~----~C~~~~~~~fdps~SsT~~~~~C~s~~C~ 211 (478)
..|+.+ ..+.+|+++|.||||||+|.|+|||||+++||+|..|. .|. .++.|||++|+||+...
T Consensus 52 ~~~l~n---~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~--~~~~y~~~~SsT~~~~~------- 119 (383)
T 2x0b_A 52 SVILTN---YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACV--YHKLFDASDSSSYKHNG------- 119 (383)
T ss_dssp EEEEEE---ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHH--TSCCBCGGGCTTCEEEE-------
T ss_pred eEeeee---cCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCccccc--CCCCCCCCCCCcEEECC-------
Confidence 467765 24689999999999999999999999999999999996 586 56899999999999865
Q ss_pred CCCCCCcCCCCceeEEEcCCCcEE------EEEECCeeeeeeEEEEEEcCCCC-c--cCCCeEEecCCCCCCcc------
Q 011749 212 SLDESECRNNTCLYEVSYGDGSYT------TVTLGSASVDNIAIGCGHNNEGL-F--VGAAGLLGLGGGLLSFP------ 276 (478)
Q Consensus 212 ~~~~~~C~~~~c~y~~~Ygdgs~~------tltlg~~~v~~~~fGc~~~~~g~-~--~~~~GIlGLg~~~~S~~------ 276 (478)
|.|.+.|++|+.. +|++++..++ +.|||++...+. | ...+||||||++.++..
T Consensus 120 -----------~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~ 187 (383)
T 2x0b_A 120 -----------TELTLRYSTGTVSGFLSQDIITVGGITVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIF 187 (383)
T ss_dssp -----------EEEEEECSSCEEEEEEEEEEEEETTEEEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHH
T ss_pred -----------cEEEEEcCCccEEEEEEeeEEEEcCceEE-EEEEEEEecCCcccccCCCceEeccCCCccccCCCCcHH
Confidence 8999999999866 8999999999 999999998763 2 35799999999888743
Q ss_pred ----cc--cCCCeeEEEeeCCCCC---CceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCc
Q 011749 277 ----SQ--INASTFSYCLVDRDSD---STSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISET 343 (478)
Q Consensus 277 ----sq--l~~~~FS~cL~~~~~~---~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~ 343 (478)
+| +..++||+||.+.... ..|.|+||++|+. ++.|+|+.. ..+|.|.|++|+||++.+..
T Consensus 188 ~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~----~~~w~v~l~~i~v~~~~~~~--- 260 (383)
T 2x0b_A 188 DNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK----TGVWQIQMKGVSVGSSTLLC--- 260 (383)
T ss_dssp HHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSS----TTSCEEEECEEEESSCCCBS---
T ss_pred HHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCC----CceEEEEEeEEEeCCceEEc---
Confidence 33 4479999999765333 3799999999986 799999986 47999999999999987532
Q ss_pred ccccccCCCCcEEEccCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCCCCccccceEEEEeCCCcEEEe
Q 011749 344 AFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPL 423 (478)
Q Consensus 344 ~~~~~~~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~~~~l 423 (478)
..+..+||||||+++++|+++|++|.+++.+.. ..+.+.+ +|++.. .+|+|+|+| +|++|+|
T Consensus 261 ------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~-----~~g~~~v-~C~~~~-----~~P~i~f~~-~g~~~~l 322 (383)
T 2x0b_A 261 ------EDGCLALVDTGASYISGSTSSIEKLMEALGAKK-----RLFDYVV-KCNEGP-----TLPDISFHL-GGKEYTL 322 (383)
T ss_dssp ------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE-----CSSCEEE-EGGGTT-----TCCCEEEEE-TTEEEEE
T ss_pred ------CCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc-----cCCcEEE-eccccc-----cCceEEEEE-CCEEEEE
Confidence 235679999999999999999999999996542 3444555 599754 689999999 8999999
Q ss_pred CCCceEEEecCC-CcEEE-EEEeCC-----CCceEecHhhhcceEEEEeCCCCEEEEeeCC
Q 011749 424 PAKNFLIPVDSN-GTFCF-AFAPTS-----SSLSIIGNVQQQGTRVSFNLRNSLVGFTPNK 477 (478)
Q Consensus 424 ~~~~yl~~~~~~-~~~Cl-~~~~~~-----~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 477 (478)
++++|+++.... +..|+ +|.+.+ ++.||||++|||++|+|||++|+|||||+++
T Consensus 323 ~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 323 TSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp CHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 999999876532 45899 787642 4689999999999999999999999999874
No 10
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=2.5e-54 Score=436.69 Aligned_cols=286 Identities=23% Similarity=0.356 Sum_probs=239.4
Q ss_pred CCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCCCccCCCCCCCCCCCCCCccccCCCCcccCCCCCCCcCCCCcee
Q 011749 146 GSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCADCYQQADPIFEPTSSSSYSPLTCNTKQCQSLDESECRNNTCLY 225 (478)
Q Consensus 146 ~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~~~C~~~~c~y 225 (478)
.+++|+++|.||||+|++.|+|||||+++||+|.+|..|.+ .++.|||++|+||+.+.| |.|
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~-~~~~y~~~~SsT~~~~~~-----------------~~~ 74 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV-XQTIYTPSKSTTAKLLSG-----------------ATW 74 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC--CCCBCGGGCTTCEEEEE-----------------EEE
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc-ccCccCCccCccceecCC-----------------CeE
Confidence 46899999999999999999999999999999999999887 789999999999998652 899
Q ss_pred EEEcCCCcEE-------EEEECCeeeeeeEEEEEEcCCCCc---cCCCeEEecCCCCCCcc-------------cccCCC
Q 011749 226 EVSYGDGSYT-------TVTLGSASVDNIAIGCGHNNEGLF---VGAAGLLGLGGGLLSFP-------------SQINAS 282 (478)
Q Consensus 226 ~~~Ygdgs~~-------tltlg~~~v~~~~fGc~~~~~g~~---~~~~GIlGLg~~~~S~~-------------sql~~~ 282 (478)
.+.|+||+.. +|+|++..++++.|||++...+.+ ...+||||||++.++.. +|+..+
T Consensus 75 ~i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~i~~~ 154 (329)
T 1oew_A 75 SISYGDGSSSSGDVYTDTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKASLDSP 154 (329)
T ss_dssp EEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTTSSSS
T ss_pred EEEeCCCCcEEEEEEEEEEEECCEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHHhccCc
Confidence 9999999843 899999999999999999877654 35799999999877653 345689
Q ss_pred eeEEEeeCCCCCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCcccccccCCCCcEEEc
Q 011749 283 TFSYCLVDRDSDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVD 358 (478)
Q Consensus 283 ~FS~cL~~~~~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~~~~iiD 358 (478)
+||+||.+ ...|.|+||++|+. ++.|+|+..+ ..+|.|.|++|+||++.+.. ....+|||
T Consensus 155 ~FS~~L~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~v~~~~~~~----------~~~~aiiD 218 (329)
T 1oew_A 155 VFTADLGY---HAPGTYNFGFIDTTAYTGSITYTAVSTK---QGFWEWTSTGYAVGSGTFKS----------TSIDGIAD 218 (329)
T ss_dssp EEEEECCS---SSCEEEEESCCCTTSSSSCCEEEECBCT---TSSCEEEEEEEEETTSCCEE----------EEEEEEEC
T ss_pred EEEEEccC---CCCeEEEEeccChHhcccceEEEEccCC---CceEEEEEeeEEECCeeccC----------CCceEEEe
Confidence 99999964 24699999999976 7999999853 46899999999999986531 12478999
Q ss_pred cCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCCCCccccceEEEEeCCCcEEEeCCCceEEEecC-CCc
Q 011749 359 SGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNFLIPVDS-NGT 437 (478)
Q Consensus 359 SGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~~~~l~~~~yl~~~~~-~~~ 437 (478)
|||++++||+++|++|++++.+.. +....+.+.+ +|+. .+|+|+|+| ||++++||+++|+++... ...
T Consensus 219 SGTt~~~lP~~~~~~l~~~i~~a~--~~~~~g~~~~-~C~~-------~~P~i~f~f-gg~~~~ip~~~~~~~~~~~~~~ 287 (329)
T 1oew_A 219 TGTTLLYLPATVVSAYWAQVSGAK--SSSSVGGYVF-PCSA-------TLPSFTFGV-GSARIVIPGDYIDFGPISTGSS 287 (329)
T ss_dssp TTCCSEEECHHHHHHHHTTSTTCE--EETTTTEEEE-ETTC-------CCCCEEEEE-TTEEEEECHHHHEEEESSTTCS
T ss_pred CCCCCEECCHHHHHHHHHhCCCcE--EcCCCCEEEE-ECCC-------CCCcEEEEE-CCEEEEECHHHeeeeecCCCCC
Confidence 999999999999999998884332 1122233444 5984 589999999 899999999999987632 347
Q ss_pred EEEE-EEeCC-CCceEecHhhhcceEEEEeC-CCCEEEEeeC
Q 011749 438 FCFA-FAPTS-SSLSIIGNVQQQGTRVSFNL-RNSLVGFTPN 476 (478)
Q Consensus 438 ~Cl~-~~~~~-~~~~IlG~~fl~~~yvvfD~-~~~rIGFa~~ 476 (478)
.|++ |.+.+ .+.||||+.|||++|+|||+ +++|||||+.
T Consensus 288 ~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 288 SCFGGIQSSAGIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp EEEESEEESTTTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred eEEEEEEeCCCCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 8995 66653 46899999999999999999 9999999974
No 11
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=2.4e-54 Score=435.67 Aligned_cols=290 Identities=23% Similarity=0.413 Sum_probs=243.3
Q ss_pred eeccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCC--CccCCCCCCCCCCCCCCccccCCCCcccCCC
Q 011749 136 QGPIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCA--DCYQQADPIFEPTSSSSYSPLTCNTKQCQSL 213 (478)
Q Consensus 136 ~~p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~--~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~ 213 (478)
..|+.+ ..+++|+++|.||||+|++.|+|||||+++||+|.+|. .|. .++.|||++|+||+...
T Consensus 5 ~~~l~n---~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~--~~~~y~~~~SsT~~~~~--------- 70 (323)
T 3cms_A 5 SVPLTN---YLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACK--NHQRFDPRKSSTFQNLG--------- 70 (323)
T ss_dssp EEEEEE---ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHH--TSCCBCGGGCTTCEEEE---------
T ss_pred eeeeEe---ccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCccccc--CCCCCCCccCCCeEECC---------
Confidence 456665 24689999999999999999999999999999999994 675 57899999999999875
Q ss_pred CCCCcCCCCceeEEEcCCCcEE------EEEECCeeeeeeEEEEEEcCCCC-c--cCCCeEEecCCCCCCcc--------
Q 011749 214 DESECRNNTCLYEVSYGDGSYT------TVTLGSASVDNIAIGCGHNNEGL-F--VGAAGLLGLGGGLLSFP-------- 276 (478)
Q Consensus 214 ~~~~C~~~~c~y~~~Ygdgs~~------tltlg~~~v~~~~fGc~~~~~g~-~--~~~~GIlGLg~~~~S~~-------- 276 (478)
|.|.+.|+||+.. +|++++..++++.|||++...+. | ...+||||||++.++..
T Consensus 71 ---------~~~~i~Yg~Gs~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~ 141 (323)
T 3cms_A 71 ---------KPLSIHYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDN 141 (323)
T ss_dssp ---------EEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHH
T ss_pred ---------cEEEEEeCCCCeEEEEEEEEEEECCeEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHH
Confidence 8999999999866 89999999999999999988663 3 35799999999877643
Q ss_pred --cc--cCCCeeEEEeeCCCCCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCcccccc
Q 011749 277 --SQ--INASTFSYCLVDRDSDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKID 348 (478)
Q Consensus 277 --sq--l~~~~FS~cL~~~~~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~ 348 (478)
+| +..++||+||.+... .|.|+||++|+. ++.|+|+.. ..+|.|.|++|+|+++.+.++
T Consensus 142 l~~q~~i~~~~FS~~l~~~~~--~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~------- 208 (323)
T 3cms_A 142 MMNRHLVAQDLFSVYMDRNGQ--ESMLTLGAIDPSYYTGSLHWVPVTV----QQYWQFTVDSVTISGVVVACE------- 208 (323)
T ss_dssp HHHTTCSSSSEEEEECCTTSS--CEEEEESCCCGGGEEEEEEEEECSS----BTTBEEEEEEEEETTEEEEST-------
T ss_pred HHHCCCCCCCEEEEEECCCCC--CEEEEECCCChhhccCceEEEECcc----CCeEEEEEeeEEECCEEeecC-------
Confidence 23 448999999975432 399999999976 799999986 468999999999999887642
Q ss_pred cCCCCcEEEccCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCCCCccccceEEEEeCCCcEEEeCCCce
Q 011749 349 ESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNF 428 (478)
Q Consensus 349 ~~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~~~~l~~~~y 428 (478)
....+||||||++++||+++|++|++++.+.. ...+.+.+ +|++.. .+|+|+|+| +|++++|++++|
T Consensus 209 --~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~----~~~g~~~~-~C~~~~-----~~P~i~f~f-~g~~~~i~~~~y 275 (323)
T 3cms_A 209 --GGCQAILDTGTSKLVGPSSDILNIQQAIGATQ----NQYGEFDI-DCDNLS-----YMPTVVFEI-NGKMYPLTPSAY 275 (323)
T ss_dssp --TCEEEEECTTCCSEEECHHHHHHHHHHHTCEE----ETTTEEEE-CTTCTT-----TSCCEEEEE-TTEEEEECHHHH
T ss_pred --CCcEEEEecCCccEeCCHHHHHHHHHHhCCee----cCCCcEEE-ECCCCc-----cCceEEEEE-CCEEEEECHHHh
Confidence 23579999999999999999999999996532 12233333 598754 689999999 899999999999
Q ss_pred EEEecCCCcEEE-EEEeCC-CCceEecHhhhcceEEEEeCCCCEEEEeeCC
Q 011749 429 LIPVDSNGTFCF-AFAPTS-SSLSIIGNVQQQGTRVSFNLRNSLVGFTPNK 477 (478)
Q Consensus 429 l~~~~~~~~~Cl-~~~~~~-~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 477 (478)
+++ .+..|+ +|.+.+ .+.||||+.|||++|+|||++++|||||+++
T Consensus 276 ~~~---~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 276 TSQ---DQGFCTSGFQSENHSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp EEE---ETTEEEESEEEC---CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ccC---CCCEEEEEEEeCCCCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 998 256798 688763 4689999999999999999999999999875
No 12
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=6.4e-54 Score=433.56 Aligned_cols=291 Identities=27% Similarity=0.519 Sum_probs=243.9
Q ss_pred eccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCCC--ccCCCCCCCCCCCCCCccccCCCCcccCCCC
Q 011749 137 GPIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCAD--CYQQADPIFEPTSSSSYSPLTCNTKQCQSLD 214 (478)
Q Consensus 137 ~p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~~--C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~ 214 (478)
.|+. ..+++|+++|.||||+|++.|+|||||+++||+|.+|.. |. .++.|||++|+||+...
T Consensus 5 ~~l~----~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~--~~~~y~~~~SsT~~~~~---------- 68 (329)
T 1htr_B 5 EPMA----YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACT--SHSRFNPSESSTYSTNG---------- 68 (329)
T ss_dssp CGGG----GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHH--TSCCBCGGGCTTCEEEE----------
T ss_pred eeeE----EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccC--CCCcCCCccCCCeEECC----------
Confidence 4555 346899999999999999999999999999999999984 64 57899999999999865
Q ss_pred CCCcCCCCceeEEEcCCCcEE------EEEECCeeeeeeEEEEEEcCCCC-c--cCCCeEEecCCCCCCccc--------
Q 011749 215 ESECRNNTCLYEVSYGDGSYT------TVTLGSASVDNIAIGCGHNNEGL-F--VGAAGLLGLGGGLLSFPS-------- 277 (478)
Q Consensus 215 ~~~C~~~~c~y~~~Ygdgs~~------tltlg~~~v~~~~fGc~~~~~g~-~--~~~~GIlGLg~~~~S~~s-------- 277 (478)
|.|.+.|++|+.. +|++++..++++.|||++...+. | ...+||||||++.++...
T Consensus 69 --------~~~~i~Yg~gs~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l 140 (329)
T 1htr_B 69 --------QTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGM 140 (329)
T ss_dssp --------EEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHH
T ss_pred --------cEEEEEeCCCCeEEEEEeeeEEEcceEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHH
Confidence 8999999999876 89999999999999999988664 3 357999999999887542
Q ss_pred --c--cCCCeeEEEeeCCCCCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCccccccc
Q 011749 278 --Q--INASTFSYCLVDRDSDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDE 349 (478)
Q Consensus 278 --q--l~~~~FS~cL~~~~~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~ 349 (478)
| +..++||+||.+......|.|+||++|+. ++.|+|+.. ..+|.|.|++|+|+++.+...
T Consensus 141 ~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~-------- 208 (329)
T 1htr_B 141 VQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQ----ELYWQIGIEEFLIGGQASGWC-------- 208 (329)
T ss_dssp HHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCS----SSSCEEEECEEEETTEECCTT--------
T ss_pred HhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCC----CceEEEEEeEEEECCceeeec--------
Confidence 2 44799999997653323799999999976 799999986 469999999999999875411
Q ss_pred CCCCcEEEccCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCCCCccccceEEEEeCCCcEEEeCCCceE
Q 011749 350 SGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNFL 429 (478)
Q Consensus 350 ~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~~~~l~~~~yl 429 (478)
.....+||||||++++||+++|++|++++.+... ..+.+.+ +|++.. .+|+|+|+| +|++++|++++|+
T Consensus 209 ~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~----~~g~~~~-~C~~~~-----~~P~i~f~f-~g~~~~i~~~~y~ 277 (329)
T 1htr_B 209 SEGCQAIVDTGTSLLTVPQQYMSALLQATGAQED----EYGQFLV-NCNSIQ-----NLPSLTFII-NGVEFPLPPSSYI 277 (329)
T ss_dssp TTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEEC----TTSCEEE-CGGGGG-----GSCCEEEEE-TTEEEEECHHHHE
T ss_pred CCCceEEEecCCccEECCHHHHHHHHHHhCCeec----CCCeEEE-eCCCcc-----cCCcEEEEE-CCEEEEECHHHhc
Confidence 2346799999999999999999999999965431 2333334 598754 689999999 8999999999999
Q ss_pred EEecCCCcEEE-EEEeCC-----CC-ceEecHhhhcceEEEEeCCCCEEEEeeCC
Q 011749 430 IPVDSNGTFCF-AFAPTS-----SS-LSIIGNVQQQGTRVSFNLRNSLVGFTPNK 477 (478)
Q Consensus 430 ~~~~~~~~~Cl-~~~~~~-----~~-~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 477 (478)
++.. + .|+ +|.+.+ ++ .||||+.|||++|+|||++++|||||+++
T Consensus 278 ~~~~--g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 278 LSNN--G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp EECS--S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ccCC--C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 9865 4 798 787642 34 79999999999999999999999999875
No 13
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=6.5e-54 Score=432.62 Aligned_cols=289 Identities=24% Similarity=0.450 Sum_probs=243.9
Q ss_pred eeccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCC--CccCCCCCCCCCCCCCCccccCCCCcccCCC
Q 011749 136 QGPIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCA--DCYQQADPIFEPTSSSSYSPLTCNTKQCQSL 213 (478)
Q Consensus 136 ~~p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~--~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~ 213 (478)
..|+.+ ..+++|+++|.||||+|++.|+|||||+++||+|.+|. .|. .++.|||++|+||+...
T Consensus 3 ~~~l~n---~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~--~~~~y~~~~SsT~~~~~--------- 68 (324)
T 1am5_A 3 TEQMKN---EADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACS--NHNKFKPRQSSTYVETG--------- 68 (324)
T ss_dssp EEEEEE---ETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHH--TSCCBCGGGCTTCEEEE---------
T ss_pred eeeeec---CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccc--CCCcCCCccCCCeEeCC---------
Confidence 456665 24689999999999999999999999999999999998 464 57899999999999865
Q ss_pred CCCCcCCCCceeEEEcCCCcEE------EEEECCeeeeeeEEEEEEcCCCC-c--cCCCeEEecCCCCCCccc-------
Q 011749 214 DESECRNNTCLYEVSYGDGSYT------TVTLGSASVDNIAIGCGHNNEGL-F--VGAAGLLGLGGGLLSFPS------- 277 (478)
Q Consensus 214 ~~~~C~~~~c~y~~~Ygdgs~~------tltlg~~~v~~~~fGc~~~~~g~-~--~~~~GIlGLg~~~~S~~s------- 277 (478)
|.|.+.|++|+.. +|++++..++++.|||++...+. | ...+||||||++.++...
T Consensus 69 ---------~~~~i~Yg~Gs~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~ 139 (324)
T 1am5_A 69 ---------KTVDLTYGTGGMRGILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDN 139 (324)
T ss_dssp ---------EEEEEECSSCEEEEEEEEEEEESSSSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHH
T ss_pred ---------cEEEEEECCCCeEEEEEECceeECCcEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHh
Confidence 8999999999877 89999999999999999988663 3 347999999998877542
Q ss_pred ---c--cCCCeeEEEeeCCCCCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCcccccc
Q 011749 278 ---Q--INASTFSYCLVDRDSDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKID 348 (478)
Q Consensus 278 ---q--l~~~~FS~cL~~~~~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~ 348 (478)
| +..++||+||.+.. ...|.|+||++|+. ++.|+|+.. ..+|.|.|++|+|+++.+..
T Consensus 140 l~~qg~i~~~~FS~~l~~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~-------- 206 (324)
T 1am5_A 140 MGSQSLVEKDLFSFYLSGGG-ANGSEVMLGGVDNSHYTGSIHWIPVTA----EKYWQVALDGITVNGQTAAC-------- 206 (324)
T ss_dssp HHHTTCSSSSEEEEECCSTT-CSCEEEEESSCCGGGBCSCCEEEEEEE----ETTEEEEECEEEETTEECCC--------
T ss_pred HHhcCCCCCCEEEEEecCCC-CCCcEEEECccCHHHcCCceEEEecCC----CcEEEEEEeEEEECCceeec--------
Confidence 2 44899999997642 34799999999975 799999986 46899999999999987532
Q ss_pred cCCCCcEEEccCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCCCCccccceEEEEeCCCcEEEeCCCce
Q 011749 349 ESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNF 428 (478)
Q Consensus 349 ~~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~~~~l~~~~y 428 (478)
.+ ..+||||||++++||+++|++|.+++.+. ...+.+.+ +|++.. .+|+|+|+| +|++++|++++|
T Consensus 207 -~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-----~~~g~~~~-~C~~~~-----~~P~i~f~f-~g~~~~i~~~~y 272 (324)
T 1am5_A 207 -EG-CQAIVDTGTSKIVAPVSALANIMKDIGAS-----ENQGEMMG-NCASVQ-----SLPDITFTI-NGVKQPLPPSAY 272 (324)
T ss_dssp -CC-EEEEECTTCSSEEECTTTHHHHHHHHTCE-----ECCCCEEC-CTTSSS-----SSCCEEEEE-TTEEEEECHHHH
T ss_pred -cC-ceEEEecCCccEECCHHHHHHHHHHhCCc-----ccCCcEEE-eCCCcc-----cCCcEEEEE-CCEEEEECHHHh
Confidence 12 57999999999999999999999999654 12333334 598754 689999999 899999999999
Q ss_pred EEEecCCCcEEE-EEEeCC-----CCceEecHhhhcceEEEEeCCCCEEEEeeCC
Q 011749 429 LIPVDSNGTFCF-AFAPTS-----SSLSIIGNVQQQGTRVSFNLRNSLVGFTPNK 477 (478)
Q Consensus 429 l~~~~~~~~~Cl-~~~~~~-----~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 477 (478)
+++. +..|+ +|.+.+ .+.||||+.|||++|+|||++++|||||+++
T Consensus 273 ~~~~---~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 273 IEGD---QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp EEES---SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred cccC---CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 9985 45798 787652 4579999999999999999999999999975
No 14
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1.4e-53 Score=429.13 Aligned_cols=290 Identities=24% Similarity=0.398 Sum_probs=241.6
Q ss_pred ccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCCCccCCCCCCCCCCCCCCccccCCCCcccCCCCCCC
Q 011749 138 PIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCADCYQQADPIFEPTSSSSYSPLTCNTKQCQSLDESE 217 (478)
Q Consensus 138 p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~~~ 217 (478)
|+.+ ..+.+|+++|.||||+|++.|+|||||+++||+|.+|..|.++.++.|||++|+||+...
T Consensus 4 ~l~n---~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~------------- 67 (320)
T 4aa9_A 4 PLTS---YLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNHHRFDPRKSSTFRNLG------------- 67 (320)
T ss_dssp -------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE-------------
T ss_pred ccee---ccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCCCCCCCCCCCcCeEcCC-------------
Confidence 5544 346899999999999999999999999999999999996544577999999999999875
Q ss_pred cCCCCceeEEEcCCCcEE------EEEECCeeeeeeEEEEEEcCCCC-cc--CCCeEEecCCCCCCcc----------cc
Q 011749 218 CRNNTCLYEVSYGDGSYT------TVTLGSASVDNIAIGCGHNNEGL-FV--GAAGLLGLGGGLLSFP----------SQ 278 (478)
Q Consensus 218 C~~~~c~y~~~Ygdgs~~------tltlg~~~v~~~~fGc~~~~~g~-~~--~~~GIlGLg~~~~S~~----------sq 278 (478)
|.|.+.|++|+.. +|+|++..++++.|||++...+. |. ..+||||||++.++.. +|
T Consensus 68 -----~~~~i~Yg~gs~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~ 142 (320)
T 4aa9_A 68 -----KPLSIHYGTGSMEGFLGYDTVTVSNIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDR 142 (320)
T ss_dssp -----EEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHT
T ss_pred -----cEEEEEECCcEEEEEEEEEEEEECCEeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHHhC
Confidence 8999999999866 99999999999999999988763 32 3699999999776542 22
Q ss_pred --cCCCeeEEEeeCCCCCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCcccccccCCC
Q 011749 279 --INASTFSYCLVDRDSDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGN 352 (478)
Q Consensus 279 --l~~~~FS~cL~~~~~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~ 352 (478)
+..++||+||.+. ...|.|+||++|+. ++.|+|+.. ..+|.|.|++|+|+++.+.++ .+
T Consensus 143 g~i~~~~Fs~~l~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~~~~~~~~---------~~ 207 (320)
T 4aa9_A 143 HLVARDLFSVYMDRN--GQGSMLTLGAIDPSYYTGSLHWVPVTL----QQYWQFTVDSVTINGVAVACV---------GG 207 (320)
T ss_dssp TCSSSSEEEEECCSS--SSCCEEEETCCCGGGEEEEEEEEECSS----BTTBEEEECEEEETTEEEEST---------TC
T ss_pred CCCCCceEEEEeCCC--CCCeEEEEcccCHHHccCceEEEEccc----CCceEEEEeEEEECCEEeccC---------CC
Confidence 4478999999754 45699999999986 789999976 578999999999999987642 24
Q ss_pred CcEEEccCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCCCCccccceEEEEeCCCcEEEeCCCceEEEe
Q 011749 353 GGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNFLIPV 432 (478)
Q Consensus 353 ~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~~~~l~~~~yl~~~ 432 (478)
..+||||||++++||+++|++|++++.+.. ...+.+.+ +|+... .+|+|+|+| +|++++|++++|+.+
T Consensus 208 ~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~----~~~g~~~~-~C~~~~-----~~p~i~f~f-~g~~~~l~~~~y~~~- 275 (320)
T 4aa9_A 208 CQAILDTGTSVLFGPSSDILKIQMAIGATE----NRYGEFDV-NCGNLR-----SMPTVVFEI-NGRDYPLSPSAYTSK- 275 (320)
T ss_dssp EEEEECTTCSSEEEEHHHHHHHHHHTTCEE----CTTSCEEE-CGGGGG-----GCCCEEEEE-TTEEEEECHHHHEEE-
T ss_pred cEEEEECCCCcEECCHHHHHHHHHHhCCcc----cCCCcEEE-eCCCCC-----cCceEEEEE-CCEEEEECHHHhccC-
Confidence 578999999999999999999999996542 12334444 598754 689999999 899999999999976
Q ss_pred cCCCcEEE-EEEeCC-CCceEecHhhhcceEEEEeCCCCEEEEeeCC
Q 011749 433 DSNGTFCF-AFAPTS-SSLSIIGNVQQQGTRVSFNLRNSLVGFTPNK 477 (478)
Q Consensus 433 ~~~~~~Cl-~~~~~~-~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 477 (478)
.+..|+ +|.... ++.||||+.|||++|+|||++++|||||+++
T Consensus 276 --~~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 276 --DQGFCTSGFQGDNNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp --ETTEEEESEEEETTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred --CCCeEEEEEEcCCCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 346798 677643 4579999999999999999999999999975
No 15
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=1.7e-53 Score=431.47 Aligned_cols=288 Identities=19% Similarity=0.357 Sum_probs=240.0
Q ss_pred eeeccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCC--CCCCc-------cCCCCCCCCCCCCCCccccCC
Q 011749 135 IQGPIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCA--PCADC-------YQQADPIFEPTSSSSYSPLTC 205 (478)
Q Consensus 135 ~~~p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~--~C~~C-------~~~~~~~fdps~SsT~~~~~C 205 (478)
+.+|+.+. +++|+++|.||||+|++.|+|||||+++||+|. +|..| .++.++.|||++|+||+...
T Consensus 3 ~~~~l~~~----~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~- 77 (334)
T 1j71_A 3 VPTTLINE----GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLN- 77 (334)
T ss_dssp EEEEEEEC----SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEE-
T ss_pred eeEEEecC----CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCC-
Confidence 56677764 589999999999999999999999999999876 67643 23467899999999999875
Q ss_pred CCcccCCCCCCCcCCCCceeEEEcCCCcEE-------EEEECCeeeeeeEEEEEEcCCCCccCCCeEEecCCCCC-----
Q 011749 206 NTKQCQSLDESECRNNTCLYEVSYGDGSYT-------TVTLGSASVDNIAIGCGHNNEGLFVGAAGLLGLGGGLL----- 273 (478)
Q Consensus 206 ~s~~C~~~~~~~C~~~~c~y~~~Ygdgs~~-------tltlg~~~v~~~~fGc~~~~~g~~~~~~GIlGLg~~~~----- 273 (478)
|.|.+.|+||+.. +|++++..++++.|||++... ..+||||||++.+
T Consensus 78 -----------------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~----~~~GilGLg~~~~~~~~~ 136 (334)
T 1j71_A 78 -----------------QDFSIEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVTTTS----VDQGIMGIGFTADEAGYN 136 (334)
T ss_dssp -----------------EEEEEEBTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES----SSSCEEECSCGGGSSTTC
T ss_pred -----------------CceEEEECCCCEEEEEEEEEEEEECCEEEccEEEEEEEecC----CCccEEEEcCCcccCccc
Confidence 8999999999854 999999999999999999763 5699999999765
Q ss_pred ---Cccccc------CCCeeEEEeeCCCCCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeec
Q 011749 274 ---SFPSQI------NASTFSYCLVDRDSDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPI 340 (478)
Q Consensus 274 ---S~~sql------~~~~FS~cL~~~~~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i 340 (478)
+++.|| ..++||+||.+. ....|.|+||++|+. ++.|+|+..+ .+|.|.|++|+||++.+..
T Consensus 137 ~~~~~~~~L~~qg~i~~~~Fs~~l~~~-~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g~~~~~ 211 (334)
T 1j71_A 137 LYDNVPVTLKKQGIINKNAYSLYLNSE-DASTGKIIFGGVDNAKYTGTLTALPVTSS----VELRVHLGSINFDGTSVST 211 (334)
T ss_dssp CCCCHHHHHHHTTSCSSSEEEEECCCT-TCSEEEEEETEEETTSEEEEEEEEECCCS----SSCEEEEEEEEETTEEEEE
T ss_pred cCCcHHHHHHHCCCCCccEEEEEeCCC-CCCCeEEEEeeechHHccCceEEEEccCC----CeEEEEEeEEEECCEeccC
Confidence 444443 378999999754 345799999999876 6899999873 5899999999999988753
Q ss_pred CCcccccccCCCCcEEEccCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCCCCccccceEEEEeCCCcE
Q 011749 341 SETAFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKV 420 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~~ 420 (478)
+ ..+||||||++++||+++|++|++++.+.+. ...+.+.+.+|+. +|+|+|+|.+|++
T Consensus 212 ~-----------~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~---~~~~~~~~~~C~~--------~p~i~f~f~~g~~ 269 (334)
T 1j71_A 212 N-----------ADVVLDSGTTITYFSQSTADKFARIVGATWD---SRNEIYRLPSCDL--------SGDAVFNFDQGVK 269 (334)
T ss_dssp E-----------EEEEECTTCSSEEECHHHHHHHHHHHTCEEE---TTTTEEECSSSCC--------CSEEEEEESTTCE
T ss_pred C-----------ccEEEeCCCCcEecCHHHHHHHHHHcCCccc---CCCceEEEEcCCC--------CCceEEEEcCCcE
Confidence 2 4689999999999999999999999987652 2222333246973 7999999977899
Q ss_pred EEeCCCceEEEecCCCcEEE-EEEeCCCCceEecHhhhcceEEEEeCCCCEEEEeeCCC
Q 011749 421 LPLPAKNFLIPVDSNGTFCF-AFAPTSSSLSIIGNVQQQGTRVSFNLRNSLVGFTPNKC 478 (478)
Q Consensus 421 ~~l~~~~yl~~~~~~~~~Cl-~~~~~~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~C 478 (478)
++||+++|+++.. ++..|+ +|.+. +.||||+.|||++|+|||++++|||||+++|
T Consensus 270 ~~i~~~~y~~~~~-~~~~C~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~ 325 (334)
T 1j71_A 270 ITVPLSELILKDS-DSSICYFGISRN--DANILGDNFLRRAYIVYDLDDKTISLAQVKY 325 (334)
T ss_dssp EEEEGGGGEEECS-SSSCEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEECC
T ss_pred EEECHHHheeecC-CCCeeEEEEeEC--CCcEEChHhhccEEEEEECCCCEEEEEecCC
Confidence 9999999999864 344598 55554 4699999999999999999999999999998
No 16
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=1.8e-53 Score=432.48 Aligned_cols=291 Identities=21% Similarity=0.362 Sum_probs=239.4
Q ss_pred eeeccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCC--CCCCc-------cCCCCCCCCCCCCCCccccCC
Q 011749 135 IQGPIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCA--PCADC-------YQQADPIFEPTSSSSYSPLTC 205 (478)
Q Consensus 135 ~~~p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~--~C~~C-------~~~~~~~fdps~SsT~~~~~C 205 (478)
+.+|+.++ +++|+++|.||||+|++.|+|||||+++||+|. +|..| .++.++.|||++|+||+...
T Consensus 3 v~~~l~~~----~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~- 77 (342)
T 2qzx_A 3 VAVTLHNE----AITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLN- 77 (342)
T ss_dssp EEEEEEEC----SSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEE-
T ss_pred eeEEEecC----CeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCC-
Confidence 45677653 589999999999999999999999999999865 67643 22467899999999999875
Q ss_pred CCcccCCCCCCCcCCCCceeEEEcCCCcEE-------EEEECCeeeeeeEEEEEEcCCCCccCCCeEEecCCCCC-----
Q 011749 206 NTKQCQSLDESECRNNTCLYEVSYGDGSYT-------TVTLGSASVDNIAIGCGHNNEGLFVGAAGLLGLGGGLL----- 273 (478)
Q Consensus 206 ~s~~C~~~~~~~C~~~~c~y~~~Ygdgs~~-------tltlg~~~v~~~~fGc~~~~~g~~~~~~GIlGLg~~~~----- 273 (478)
|.|.+.|+||+.. +|+|++..++++.|||++... ..+||||||++.+
T Consensus 78 -----------------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~----~~~GilGLg~~~~~~~~~ 136 (342)
T 2qzx_A 78 -----------------TRFDIKYGDGSYAKGKLYKDTVGIGGVSVRDQLFANVWSTS----ARKGILGIGFQSGEATEF 136 (342)
T ss_dssp -----------------EEEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEC----SSSCEEECSCGGGCSSSS
T ss_pred -----------------CcEEEEeCCCCeEEEEEEEEEEEECCEEecceEEEEEEecC----CCcCEEEEccccccCCCc
Confidence 8999999999854 899999999999999999764 5699999999765
Q ss_pred ---Cccccc------CCCeeEEEeeCCCCCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeec
Q 011749 274 ---SFPSQI------NASTFSYCLVDRDSDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPI 340 (478)
Q Consensus 274 ---S~~sql------~~~~FS~cL~~~~~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i 340 (478)
+++.|| ..++||+||.+. ....|.|+||++|+. ++.|+|+..+ .+|.|.|++|+||++.+..
T Consensus 137 ~~~~~~~~L~~qg~i~~~~Fs~~l~~~-~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g~~~~~ 211 (342)
T 2qzx_A 137 DYDNLPISLRNQGIIGKAAYSLYLNSA-EASTGQIIFGGIDKAKYSGSLVDLPITSE----KKLTVGLRSVNVRGRNVDA 211 (342)
T ss_dssp CCCCHHHHHHHTTSSSSSEEEEECCCT-TCSEEEEEETEEETTSBSSCCEEEECCCS----SSCEEEEEEEEETTEEEEE
T ss_pred cCccHHHHHHHCCCcCccEEEEEeCCC-CCCCeEEEECccchhhEecceEEEeccCC----ceEEEEEeEEEECCEecCC
Confidence 444443 378999999754 345799999999876 7999999874 5899999999999988753
Q ss_pred CCcccccccCCCCcEEEccCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCCCCccccceEEEEeCCCcE
Q 011749 341 SETAFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKV 420 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~~ 420 (478)
+ ..+||||||++++||+++|++|++++.+.+...+...+.+.+ +|+. +|+|+|+|.+|++
T Consensus 212 ~-----------~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~~~~~~~~-~C~~--------~p~i~f~f~~g~~ 271 (342)
T 2qzx_A 212 N-----------TNVLLDSGTTISYFTRSIVRNILYAIGAQMKFDSAGNKVYVA-DCKT--------SGTIDFQFGNNLK 271 (342)
T ss_dssp E-----------EEEEECTTCSSEEECHHHHHHHHHHHTCEEEECTTSCEEEEE-CTTC--------CCEEEEEETTTEE
T ss_pred C-----------cCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeeccCCCcEEEE-ECCC--------CCcEEEEECCCcE
Confidence 2 468999999999999999999999998765321112223444 5863 7999999977899
Q ss_pred EEeCCCceEEEec----CCCcEEEE-EEeCCCCceEecHhhhcceEEEEeCCCCEEEEeeCCC
Q 011749 421 LPLPAKNFLIPVD----SNGTFCFA-FAPTSSSLSIIGNVQQQGTRVSFNLRNSLVGFTPNKC 478 (478)
Q Consensus 421 ~~l~~~~yl~~~~----~~~~~Cl~-~~~~~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~C 478 (478)
++||+++|+++.. ..+..|++ +.+. +.||||+.|||++|+|||++++|||||+++|
T Consensus 272 ~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~ 332 (342)
T 2qzx_A 272 ISVPVSEFLFQTYYTSGKPFPKCEVRIRES--EDNILGDNFLRSAYVVYNLDDKKISMAPVKY 332 (342)
T ss_dssp EEEEGGGGEECCBCTTSCBCSSEEESEEEC--SSCEECHHHHTTEEEEEETTTTEEEEEEBCC
T ss_pred EEEcHHHhcccccccCCCCCCccEEEEecC--CCcEeChHhhhcEEEEEECCCCEEEEEeeCC
Confidence 9999999998742 22467984 5554 4699999999999999999999999999998
No 17
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=9.9e-53 Score=426.35 Aligned_cols=289 Identities=24% Similarity=0.403 Sum_probs=242.0
Q ss_pred eeeccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEe-----CCCCCCccCCCCCCCCCCCCCCccccCCCCcc
Q 011749 135 IQGPIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQ-----CAPCADCYQQADPIFEPTSSSSYSPLTCNTKQ 209 (478)
Q Consensus 135 ~~~p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~-----~~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~ 209 (478)
+++|+.+. +++|+++|.||||+|++.|+|||||+++||+ |.+|..|. .++.|||++|+||+...
T Consensus 3 i~~~l~~~----~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~--~~~~y~~~~SsT~~~~~----- 71 (339)
T 3fv3_A 3 ISLSLINE----GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCK--SSGTFTPSSSSSYKNLG----- 71 (339)
T ss_dssp EEEEEEEC----SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTT--TTCCBCGGGCTTCEEEE-----
T ss_pred eeeEEEcC----CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCC--CCCcCCCccCcceeeCC-----
Confidence 56777765 5799999999999999999999999999998 66666785 57899999999999976
Q ss_pred cCCCCCCCcCCCCceeEEEcCCCcEE-------EEEECCeeeeeeEEEEEEcCCCCccCCCeEEecCCCCCC--------
Q 011749 210 CQSLDESECRNNTCLYEVSYGDGSYT-------TVTLGSASVDNIAIGCGHNNEGLFVGAAGLLGLGGGLLS-------- 274 (478)
Q Consensus 210 C~~~~~~~C~~~~c~y~~~Ygdgs~~-------tltlg~~~v~~~~fGc~~~~~g~~~~~~GIlGLg~~~~S-------- 274 (478)
|.|.+.|+||+.. +|+|++..++++.|||++...+ .+||||||++.++
T Consensus 72 -------------~~~~i~Yg~gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~----~~GilGLg~~~~~~~~~~~~~ 134 (339)
T 3fv3_A 72 -------------AAFTIRYGDGSTSQGTWGKDTVTINGVSITGQQIADVTQTSV----DQGILGIGYTSNEAVYDTSGR 134 (339)
T ss_dssp -------------EEEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEESS----SSCEEECSCGGGCCCBCTTSC
T ss_pred -------------ceEEEEECCCceEEEEEEEEEEEECCEEECceEEEEEEecCC----CceeEEecCcccccccccccc
Confidence 8999999999544 9999999999999999998764 5999999997765
Q ss_pred --------ccccc------CCCeeEEEeeCCCCCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCe
Q 011749 275 --------FPSQI------NASTFSYCLVDRDSDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGD 336 (478)
Q Consensus 275 --------~~sql------~~~~FS~cL~~~~~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~ 336 (478)
++.|| ..++||+||.+. ....|.|+||++|+. ++.|+|+... .+|.|.|++|+|+++
T Consensus 135 ~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~-~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g~ 209 (339)
T 3fv3_A 135 QTTPNYDNVPVTLKKQGKIRTNAYSLYLNSP-SAETGTIIFGGVDNAKYSGKLVAEQVTSS----QALTISLASVNLKGS 209 (339)
T ss_dssp BCSCCCCCHHHHHHHTTSCSSSEEEEECCCT-TCSEEEEEETEEETTSBSSCCEEEEBCCS----SSCEEEEEEEEESSC
T ss_pred ccCccCCcHHHHHHHCCCCCCceEEEEECCC-CCCCeEEEEeeechHHeecceEEEecccC----ccEEEEEEEEEECCE
Confidence 33333 368999999753 345799999999876 7999999873 589999999999999
Q ss_pred EeecCCcccccccCCCCcEEEccCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCCCCccccceEEEEeC
Q 011749 337 LLPISETAFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFP 416 (478)
Q Consensus 337 ~l~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~ 416 (478)
.+... ..+||||||++++||+++|++|++++.+.........+.+.+ +|+.. .+|+|+|+|.
T Consensus 210 ~~~~~-----------~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~~~~-~C~~~------~~p~i~f~f~ 271 (339)
T 3fv3_A 210 SFSFG-----------DGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARDQYLYFI-DCNTD------TSGTTVFNFG 271 (339)
T ss_dssp EEEEE-----------EEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEETTEEEEEE-CTTCC------CCSEEEEEET
T ss_pred eecCC-----------ccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccccCceEEE-ecCCC------CCCcEEEEEC
Confidence 87642 468999999999999999999999998654321112333444 59862 4899999996
Q ss_pred CCcEEEeCCCceEEEecCCCcEEE-EEEeCCCCceEecHhhhcceEEEEeCCCCEEEEeeCCC
Q 011749 417 EGKVLPLPAKNFLIPVDSNGTFCF-AFAPTSSSLSIIGNVQQQGTRVSFNLRNSLVGFTPNKC 478 (478)
Q Consensus 417 gg~~~~l~~~~yl~~~~~~~~~Cl-~~~~~~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~C 478 (478)
+|++++||+++|+++.. +..|+ +|.+ .+.||||+.|||++|+|||++++|||||+++|
T Consensus 272 ~g~~~~v~~~~~~~~~~--~~~C~~~i~~--~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~ 330 (339)
T 3fv3_A 272 NGAKITVPNTEYVYQNG--DGTCLWGIQP--SDDTILGDNFLRHAYLLYNLDANTISIAQVKY 330 (339)
T ss_dssp TSCEEEEEGGGGEEECS--SSCEEESEEE--CSSCEECHHHHTTEEEEEETTTTEEEEEEBCC
T ss_pred CCCEEEECHHHheeeCC--CCeEEEEEEe--CCcEEeChHHHhCEEEEEECCCCEEEEEecCC
Confidence 68999999999999864 34685 8877 35799999999999999999999999999998
No 18
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=6.6e-53 Score=434.58 Aligned_cols=310 Identities=23% Similarity=0.459 Sum_probs=245.9
Q ss_pred eeeccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCCCccCCCCCCCCCCCCCCccccCCCCcccCCC-
Q 011749 135 IQGPIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCADCYQQADPIFEPTSSSSYSPLTCNTKQCQSL- 213 (478)
Q Consensus 135 ~~~p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~- 213 (478)
+.+||+.+ ..+++|+++|.|||| |+|||||+++||+|.+|. +|+.++|.++.|...
T Consensus 3 ~~~pv~~~--~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~----------------~~~~~~C~s~~C~~~~ 59 (381)
T 1t6e_X 3 VLAPVTKD--PATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ----------------PPAEIPCSSPTCLLAN 59 (381)
T ss_dssp EEEEEEEC--TTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC----------------CCCCCBTTSHHHHHHH
T ss_pred eEEeEEec--CCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC----------------CCCccCCCCchhcccc
Confidence 45677754 447899999999998 999999999999998651 356777888888643
Q ss_pred --CCCCcCC---------CCc-eeEEEcCCCcEE-------EEEECC----eeeeee----EEEEEEcC--CCCccCCCe
Q 011749 214 --DESECRN---------NTC-LYEVSYGDGSYT-------TVTLGS----ASVDNI----AIGCGHNN--EGLFVGAAG 264 (478)
Q Consensus 214 --~~~~C~~---------~~c-~y~~~Ygdgs~~-------tltlg~----~~v~~~----~fGc~~~~--~g~~~~~~G 264 (478)
....|.. +.| .|.+.|+||+.+ +|++++ ..++++ .|||++.+ .+.+...+|
T Consensus 60 ~~~~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~~~~~dG 139 (381)
T 1t6e_X 60 AYPAPGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPRGSTG 139 (381)
T ss_dssp SSCCTTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTSCTTEEE
T ss_pred CCCCCCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCCCCCCce
Confidence 2234542 347 599999999864 888873 567765 56999876 455567899
Q ss_pred EEecCCCCCCcccccC-----CCeeEEEeeCCCCCCceEEEeCCCCCC------CCeeeecccCCCCCeeEEEEEeEEEE
Q 011749 265 LLGLGGGLLSFPSQIN-----ASTFSYCLVDRDSDSTSTLEFDSSLPP------NAVTAPLLRNHELDTFYYLGLTGISV 333 (478)
Q Consensus 265 IlGLg~~~~S~~sql~-----~~~FS~cL~~~~~~~~g~L~fG~~d~~------~~~~tpl~~~~~~~~~y~v~l~gIsV 333 (478)
|||||++.+|+++|+. .++|||||.+. ..|.|+||+.+.. ++.|+|++.++.. .+|+|+|++|+|
T Consensus 140 IlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~---~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~-~~y~v~l~~i~v 215 (381)
T 1t6e_X 140 VAGLANSGLALPAQVASAQKVANRFLLCLPTG---GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGS-PAHYISARSIVV 215 (381)
T ss_dssp EEECSSSTTSHHHHHHHHHTCCSEEEEECCSS---SCEEEEESCCSCSCHHHHTTCCEEECBCCTTC-CSCEECEEEEEE
T ss_pred EEEeCCCcchhHHHHhhhcccCceEEEEeCCC---CCeeEEeCCcccccccccCcceeeccccCCCC-cceEEEEEEEEE
Confidence 9999999999998876 58999999753 5699999998751 7999999986532 357799999999
Q ss_pred cCeEeecCCcccccccCCCCcEEEccCcceeeecHHHHHHHHHHHHhhcc-------CCCCC-CCccccccccccCCCC-
Q 011749 334 GGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTR-------ALSPT-DGVALFDTCYDFSSRS- 404 (478)
Q Consensus 334 gg~~l~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~-------~~~~~-~~~~~~~~C~~~~~~~- 404 (478)
|++.+.++...|. ++++||||||++++||+++|++|+++|.+++. .+++. .....++.|++.++..
T Consensus 216 g~~~~~~~~~~~~-----~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~ 290 (381)
T 1t6e_X 216 GDTRVPVPEGALA-----TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGN 290 (381)
T ss_dssp TTEECCCCTTCSC-----TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCE
T ss_pred cCEEecCCHHHcc-----CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcc
Confidence 9999887766553 46799999999999999999999999988763 23332 2223456799866432
Q ss_pred ---ccccceEEEEeCCCcEEEeCCCceEEEecCCCcEEEEEEeCCC--------CceEecHhhhcceEEEEeCCCCEEEE
Q 011749 405 ---SVEVPTVSFHFPEGKVLPLPAKNFLIPVDSNGTFCFAFAPTSS--------SLSIIGNVQQQGTRVSFNLRNSLVGF 473 (478)
Q Consensus 405 ---~~~~P~l~f~f~gg~~~~l~~~~yl~~~~~~~~~Cl~~~~~~~--------~~~IlG~~fl~~~yvvfD~~~~rIGF 473 (478)
...+|+|+|+|.||++|+|++++|+++.. ++..|++|++... +.||||+.|||++|+|||++|+||||
T Consensus 291 ~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~-~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGf 369 (381)
T 1t6e_X 291 NLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVK-QGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGF 369 (381)
T ss_dssp ETTEECCCCEEEEETTSCEEEECHHHHEEEEE-TTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEE
T ss_pred cccCCcCCeEEEEECCCcEEEeCCCeEEEEcC-CCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEE
Confidence 13689999999667999999999999875 4678999987643 57999999999999999999999999
Q ss_pred eeCC
Q 011749 474 TPNK 477 (478)
Q Consensus 474 a~~~ 477 (478)
|+++
T Consensus 370 A~~~ 373 (381)
T 1t6e_X 370 SRLP 373 (381)
T ss_dssp EECC
T ss_pred eccc
Confidence 9865
No 19
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=7.9e-53 Score=427.28 Aligned_cols=296 Identities=22% Similarity=0.381 Sum_probs=246.8
Q ss_pred cceeeccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCC----CccCCCCCCCCCCCCCCccccCCCCc
Q 011749 133 EEIQGPIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCA----DCYQQADPIFEPTSSSSYSPLTCNTK 208 (478)
Q Consensus 133 ~~~~~p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~----~C~~~~~~~fdps~SsT~~~~~C~s~ 208 (478)
.....|+.+. .+.+|+++|.||||+|++.|+|||||+++||+|..|. .|. .++.|||++|+||+...
T Consensus 6 ~~~~~~l~n~---~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~--~~~~y~~~~SsT~~~~~---- 76 (341)
T 3k1w_A 6 TTSSVILTNY---MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACV--YHKLFDASDSSSYKHNG---- 76 (341)
T ss_dssp BCEEEEEEEE---TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHH--TSCCBCGGGCTTCEEEE----
T ss_pred CCccccceEc---cCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCccc--CCCCCCCCcCcCeeECC----
Confidence 3456788763 3689999999999999999999999999999999998 574 57899999999999865
Q ss_pred ccCCCCCCCcCCCCceeEEEcCCCcEE------EEEECCeeeeeeEEEEEEcCCCC-c--cCCCeEEecCCCCCCc----
Q 011749 209 QCQSLDESECRNNTCLYEVSYGDGSYT------TVTLGSASVDNIAIGCGHNNEGL-F--VGAAGLLGLGGGLLSF---- 275 (478)
Q Consensus 209 ~C~~~~~~~C~~~~c~y~~~Ygdgs~~------tltlg~~~v~~~~fGc~~~~~g~-~--~~~~GIlGLg~~~~S~---- 275 (478)
|.|.+.|++|+.. +|+|++..+ ++.|||++...+. | ...+||||||++.++.
T Consensus 77 --------------~~~~i~Yg~gs~~G~~~~D~v~ig~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~ 141 (341)
T 3k1w_A 77 --------------TELTLRYSTGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVT 141 (341)
T ss_dssp --------------EEEEEEETTEEEEEEEEEEEEEETTEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCC
T ss_pred --------------CEEEEEECCcEEEEEEEEEEEEECCcee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCC
Confidence 8999999999865 999999999 9999999988764 2 3479999999988763
Q ss_pred ------ccc--cCCCeeEEEeeCCCC---CCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeec
Q 011749 276 ------PSQ--INASTFSYCLVDRDS---DSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPI 340 (478)
Q Consensus 276 ------~sq--l~~~~FS~cL~~~~~---~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i 340 (478)
.+| +..++||+||.+... ...|.|+||++|+. ++.|+|+.. ..+|.|.+++|+|+++.+.+
T Consensus 142 ~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~~~~~~~ 217 (341)
T 3k1w_A 142 PIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK----TGVWQIQMKGVSVGSSTLLC 217 (341)
T ss_dssp CHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSS----TTSCEEEECCEEETTEEEEC
T ss_pred CHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCC----CCEEEEEEeEEEECCEEeec
Confidence 233 558999999976431 23699999999986 789999985 57999999999999987543
Q ss_pred CCcccccccCCCCcEEEccCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCCCCccccceEEEEeCCCcE
Q 011749 341 SETAFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKV 420 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~~ 420 (478)
+ ....+||||||++++||+++|++|++++.+.. ...+ +.+ +|.... .+|+|+|+| +|++
T Consensus 218 ~---------~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~----~~~g-~~~-~C~~~~-----~~p~i~f~f-~g~~ 276 (341)
T 3k1w_A 218 E---------DGCLALVDTGASYISGSTSSIEKLMEALGAKK----RLFD-YVV-KCNEGP-----TLPDISFHL-GGKE 276 (341)
T ss_dssp T---------TCEEEEECTTCSSEEECHHHHHHHHHHHTCEE----CSSC-EEE-EGGGGG-----GCCCEEEEE-TTEE
T ss_pred C---------CCCEEEEECCCChhcCCHHHHHHHHHHcCCee----cCCC-eEE-eCCCCC-----cCCcEEEEE-CCEE
Confidence 2 23578999999999999999999999996543 1234 444 498643 689999999 8999
Q ss_pred EEeCCCceEEEecC-CCcEEE-EEEeC-----CCCceEecHhhhcceEEEEeCCCCEEEEeeCC
Q 011749 421 LPLPAKNFLIPVDS-NGTFCF-AFAPT-----SSSLSIIGNVQQQGTRVSFNLRNSLVGFTPNK 477 (478)
Q Consensus 421 ~~l~~~~yl~~~~~-~~~~Cl-~~~~~-----~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 477 (478)
++|++++|+++... ++..|+ +|... ..+.||||+.|||++|+|||++++|||||+++
T Consensus 277 ~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 277 YTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp EEECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEECHHHheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 99999999987653 357898 67763 24679999999999999999999999999975
No 20
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=4.2e-52 Score=439.54 Aligned_cols=306 Identities=23% Similarity=0.425 Sum_probs=241.1
Q ss_pred eeccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCC---CccCCCCCCCCCCCCCCccccCCCCcccCC
Q 011749 136 QGPIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCA---DCYQQADPIFEPTSSSSYSPLTCNTKQCQS 212 (478)
Q Consensus 136 ~~p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~---~C~~~~~~~fdps~SsT~~~~~C~s~~C~~ 212 (478)
.+|+.+. .+++|+++|.||||+|++.|+|||||+++||+|..|. .|. .++.|||++|+||+...
T Consensus 43 ~~~l~n~---~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~--~~~~y~~~~SsT~~~~~-------- 109 (478)
T 1qdm_A 43 IVALKNY---MNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACY--LHSRYKAGASSTYKKNG-------- 109 (478)
T ss_dssp SGGGCCG---GGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGG--GSCCBCGGGCTTCBCCC--------
T ss_pred eEEeEec---cCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCcccc--CCCCCCcccCCCeeeCC--------
Confidence 4666653 4689999999999999999999999999999999996 686 46799999999998865
Q ss_pred CCCCCcCCCCceeEEEcCCCcEE------EEEECCeeeeeeEEEEEEcCCCC-c--cCCCeEEecCCCCCCcc-------
Q 011749 213 LDESECRNNTCLYEVSYGDGSYT------TVTLGSASVDNIAIGCGHNNEGL-F--VGAAGLLGLGGGLLSFP------- 276 (478)
Q Consensus 213 ~~~~~C~~~~c~y~~~Ygdgs~~------tltlg~~~v~~~~fGc~~~~~g~-~--~~~~GIlGLg~~~~S~~------- 276 (478)
|.|.+.|++|+.. +|++++..++++.|||++...+. | ...+||||||++.+|..
T Consensus 110 ----------~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~p~~~ 179 (478)
T 1qdm_A 110 ----------KPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVWY 179 (478)
T ss_dssp ----------CEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGCCCHHH
T ss_pred ----------cEEEEEcCCCCeEEEEEEEEEEECCeEECCEEEEEEEecCCcccccccccceecccccccccCCCCcHHH
Confidence 8999999999865 99999999999999999987664 2 35799999999888742
Q ss_pred ---cc--cCCCeeEEEeeCCC-CCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCcccc
Q 011749 277 ---SQ--INASTFSYCLVDRD-SDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFK 346 (478)
Q Consensus 277 ---sq--l~~~~FS~cL~~~~-~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~ 346 (478)
+| +..++||+||.+.. ....|.|+||++|+. ++.|+|+.. ..+|.|.|++|+||++.+.++.
T Consensus 180 ~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~----~~~w~v~l~~i~v~g~~~~~~~---- 251 (478)
T 1qdm_A 180 KMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQ----KGYWQFDMGDVLVGGKSTGFCA---- 251 (478)
T ss_dssp HHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEE----ETTEEEEECCEEETTEECSTTT----
T ss_pred HHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccC----CCeEEEEEeEEEECCEEEeecC----
Confidence 23 44789999997542 234699999999986 789999976 4699999999999998876432
Q ss_pred cccCCCCcEEEccCcceeeecHHHHHHHHHHHHhhc----------------------cCCC-----------CCCC---
Q 011749 347 IDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGT----------------------RALS-----------PTDG--- 390 (478)
Q Consensus 347 ~~~~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~----------------------~~~~-----------~~~~--- 390 (478)
++..+||||||++++||+++|++|.+++.+.. ...+ ...+
T Consensus 252 ----~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~ 327 (478)
T 1qdm_A 252 ----GGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRG 327 (478)
T ss_dssp ----TCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC-------
T ss_pred ----CCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCcccc
Confidence 34679999999999999999999999986431 0000 0000
Q ss_pred -------------------------------------------------ccccccccccCCC---------CccccceEE
Q 011749 391 -------------------------------------------------VALFDTCYDFSSR---------SSVEVPTVS 412 (478)
Q Consensus 391 -------------------------------------------------~~~~~~C~~~~~~---------~~~~~P~l~ 412 (478)
.+..+.|+..+.. ....+|+|+
T Consensus 328 ~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~~~lP~i~ 407 (478)
T 1qdm_A 328 VSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDIE 407 (478)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGGTTCCCEE
T ss_pred ccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecccccccccEE
Confidence 0001234433211 112689999
Q ss_pred EEeCCCcEEEeCCCceEEEecCC-CcEEE-EEEeCC-----CCceEecHhhhcceEEEEeCCCCEEEEeeCC
Q 011749 413 FHFPEGKVLPLPAKNFLIPVDSN-GTFCF-AFAPTS-----SSLSIIGNVQQQGTRVSFNLRNSLVGFTPNK 477 (478)
Q Consensus 413 f~f~gg~~~~l~~~~yl~~~~~~-~~~Cl-~~~~~~-----~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 477 (478)
|+| ||+.|+|+|++|+++.+.. +..|+ +|...+ ++.||||++|||++|+|||++|+|||||++.
T Consensus 408 f~~-gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 408 FTI-GGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp EEE-TTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEE-CCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeCC
Confidence 999 8999999999999987632 35798 576532 4679999999999999999999999999864
No 21
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=1.2e-52 Score=431.51 Aligned_cols=291 Identities=22% Similarity=0.354 Sum_probs=244.0
Q ss_pred eeeccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCCCccCCCCCCCCCCCCCCccccCCCCcccCCCC
Q 011749 135 IQGPIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCADCYQQADPIFEPTSSSSYSPLTCNTKQCQSLD 214 (478)
Q Consensus 135 ~~~p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~ 214 (478)
...|+.. ..+++|+++|.||||+|++.|+|||||+++||+|.+|..+.++.++.|||++|+||+...
T Consensus 52 ~~~pl~~---~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~---------- 118 (375)
T 1miq_A 52 DVIELDD---VANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIKNLYDSSKSKSYEKDG---------- 118 (375)
T ss_dssp BCCCGGG---TBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGGSCCBCGGGCTTCEEEE----------
T ss_pred ceEEccc---CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccCCCcCCCccCCceEECC----------
Confidence 3467765 346899999999999999999999999999999999974333467899999999999865
Q ss_pred CCCcCCCCceeEEEcCCCcEE------EEEECCeeeeeeEEEEEEc----CCCCc--cCCCeEEecCCCCCCccc-----
Q 011749 215 ESECRNNTCLYEVSYGDGSYT------TVTLGSASVDNIAIGCGHN----NEGLF--VGAAGLLGLGGGLLSFPS----- 277 (478)
Q Consensus 215 ~~~C~~~~c~y~~~Ygdgs~~------tltlg~~~v~~~~fGc~~~----~~g~~--~~~~GIlGLg~~~~S~~s----- 277 (478)
|.|.+.|+||+.. +|++++..+++ .|||++. .. .| ...+||||||++.++...
T Consensus 119 --------~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~s~~~~~~~~ 188 (375)
T 1miq_A 119 --------TKVDITYGSGTVKGFFSKDLVTLGHLSMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDLSIGSIDPIV 188 (375)
T ss_dssp --------EEEEEEETTEEEEEEEEEEEEEETTEEEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCTTCSSCCCHH
T ss_pred --------cEEEEEeCCCeEEEEEEEEEEEEcCceECc-EEEEEEecccccc-ccccCCCceEEeCCCCcccccCCCCHH
Confidence 8999999999866 99999999999 9999998 54 44 357999999998887542
Q ss_pred -----c--cCCCeeEEEeeCCCCCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCcccc
Q 011749 278 -----Q--INASTFSYCLVDRDSDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFK 346 (478)
Q Consensus 278 -----q--l~~~~FS~cL~~~~~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~ 346 (478)
| +..++||+||.+.+ ...|.|+||++|+. ++.|+|+.. ..+|.|.|+ |+||++.+ .
T Consensus 189 ~~l~~qg~i~~~~FS~~L~~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~-i~v~g~~~----~--- 255 (375)
T 1miq_A 189 VELKNQNKIDNALFTFYLPVHD-VHAGYLTIGGIEEKFYEGNITYEKLNH----DLYWQIDLD-VHFGKQTM----E--- 255 (375)
T ss_dssp HHHHHTTSSSSSEEEEECCTTC-TTEEEEEESSCCGGGEEEEEEEEEBSS----SSSSEEEEE-EEETTEEE----E---
T ss_pred HHHHhccCcCCCEEEEEecCCC-CCCeEEEEcccCHHHcCCceEEEecCC----CceEEEEEE-EEECCEEc----c---
Confidence 2 44799999997643 35799999999976 799999975 479999999 99999876 1
Q ss_pred cccCCCCcEEEccCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCCCCccccceEEEEeCCCcEEEeCCC
Q 011749 347 IDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAK 426 (478)
Q Consensus 347 ~~~~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~~~~l~~~ 426 (478)
...+||||||++++||+++|++|.+++.+.. +...+.+.+ +|+. . .+|+|+|+| +|++|+|+++
T Consensus 256 -----~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~---~~~~g~~~~-~C~~-~-----~~P~i~f~f-~g~~~~l~~~ 319 (375)
T 1miq_A 256 -----KANVIVDSGTTTITAPSEFLNKFFANLNVIK---VPFLPFYVT-TCDN-K-----EMPTLEFKS-ANNTYTLEPE 319 (375)
T ss_dssp -----EEEEEECTTBSSEEECHHHHHHHHHHHTCEE---CTTSSCEEE-ETTC-T-----TCCCEEEEC-SSCEEEECGG
T ss_pred -----cceEEecCCCccEEcCHHHHHHHHHHhCCcc---cCCCCeEEE-ECCC-C-----CCCcEEEEE-CCEEEEECHH
Confidence 2568999999999999999999999996542 233344444 5986 2 689999999 8999999999
Q ss_pred ceEEEecC-CCcEEE-EEEeCCC--CceEecHhhhcceEEEEeCCCCEEEEeeCC
Q 011749 427 NFLIPVDS-NGTFCF-AFAPTSS--SLSIIGNVQQQGTRVSFNLRNSLVGFTPNK 477 (478)
Q Consensus 427 ~yl~~~~~-~~~~Cl-~~~~~~~--~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 477 (478)
+|+++... ++..|+ +|++.+. +.||||++|||++|+|||++++|||||+++
T Consensus 320 ~yi~~~~~~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 320 YYMNPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp GSEEESSSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred HhEeeccCCCCCeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 99998653 246898 8887652 689999999999999999999999999874
No 22
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=3.5e-52 Score=420.22 Aligned_cols=284 Identities=24% Similarity=0.367 Sum_probs=237.3
Q ss_pred CCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCCCccCCCCCCCCCCCCCCccccCCCCcccCCCCCCCcCCCCcee
Q 011749 146 GSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCADCYQQADPIFEPTSSSSYSPLTCNTKQCQSLDESECRNNTCLY 225 (478)
Q Consensus 146 ~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~~~C~~~~c~y 225 (478)
.+++|+++|.|| +|++.|+|||||+++||+|.+|..|.++.++.|||++|+ ++.. .|.|
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~------------------~~~~ 70 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQTGHDLYTPSSSA-TKLS------------------GYSW 70 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHTTSCCCBCCSSC-EECT------------------TCBE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccCCCCCCCchhcC-CccC------------------CCEE
Confidence 468999999999 999999999999999999999999888889999999998 5532 3899
Q ss_pred EEEcCCCcEE-------EEEECCeeeeeeEEEEEEcCCCCc---cCCCeEEecCCCCCCc-------------ccccCCC
Q 011749 226 EVSYGDGSYT-------TVTLGSASVDNIAIGCGHNNEGLF---VGAAGLLGLGGGLLSF-------------PSQINAS 282 (478)
Q Consensus 226 ~~~Ygdgs~~-------tltlg~~~v~~~~fGc~~~~~g~~---~~~~GIlGLg~~~~S~-------------~sql~~~ 282 (478)
.+.|+||+.. +|+|++..++++.|||++...+.+ ...+||||||++.++. .+|+..+
T Consensus 71 ~i~Yg~Gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~i~~~ 150 (325)
T 1ibq_A 71 DISYGDGSSASGDVYRDTVTVGGVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQLDSP 150 (325)
T ss_dssp EEECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGGSSSS
T ss_pred EEEeCCCCEEEEEEEEeEEEECCEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHHhcCCc
Confidence 9999999843 999999999999999999876644 2579999999987764 2456689
Q ss_pred eeEEEeeCCCCCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCcccccccCCCCcEEEc
Q 011749 283 TFSYCLVDRDSDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVD 358 (478)
Q Consensus 283 ~FS~cL~~~~~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~~~~iiD 358 (478)
+||+||.+ +..|.|+||++|+. ++.|+|+... ..+|.|.|++|+||++.+. .....+|||
T Consensus 151 ~FS~~l~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~~~~~----------~~~~~aiiD 214 (325)
T 1ibq_A 151 LFAVQLKH---DAPGVYDFGYIDDSKYTGSITYTDADSS---QGYWGFSTDGYSIGDGSSS----------SSGFSAIAD 214 (325)
T ss_dssp EEEEEEET---TEEEEEEESSCCGGGBSSCCEEEECBCT---TSSCEEEECEEEETTSCCB----------SCCEEEEEC
T ss_pred EEEEEecC---CCCceEEECCcChhhccCceEEEEcCCC---CceEEEEECcEEECCeecc----------CCCceEEEe
Confidence 99999974 24699999999975 7999999753 5689999999999998653 124579999
Q ss_pred cCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCCCCccccceEEEEeCCCcEEEeCCCceEEEecC-CCc
Q 011749 359 SGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNFLIPVDS-NGT 437 (478)
Q Consensus 359 SGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~~~~l~~~~yl~~~~~-~~~ 437 (478)
|||++++||+++|++|++++.+.. .....+.+.+ +|+. .+|+|+|+| +|++++||+++|+++... +..
T Consensus 215 SGTt~~~lP~~~~~~i~~~i~~a~--~~~~~g~~~~-~C~~-------~~P~i~f~f-gg~~~~i~~~~~~~~~~~~~~~ 283 (325)
T 1ibq_A 215 TGTTLILLDDEIVSAYYEQVSGAQ--ESYEAGGYVF-SCST-------DLPDFTVVI-GDYKAVVPGKYINYAPVSTGSS 283 (325)
T ss_dssp TTCCSEEECHHHHHHHHTTSTTCB--CCSSSSSCEE-ETTC-------CCCCEEEEE-TTEEEEECHHHHEEEESSTTCS
T ss_pred CCCCcEeCCHHHHHHHHHhCCCce--EcCcCCeEEE-EcCC-------CCCcEEEEE-CCEEEEECHHHhcccccCCCCC
Confidence 999999999999999999884332 2222344445 4984 589999999 899999999999987643 237
Q ss_pred EEEE-EEeCC-CCceEecHhhhcceEEEEeCCCCEEEEeeCC
Q 011749 438 FCFA-FAPTS-SSLSIIGNVQQQGTRVSFNLRNSLVGFTPNK 477 (478)
Q Consensus 438 ~Cl~-~~~~~-~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 477 (478)
.|++ |.+.+ .+.||||+.|||++|+|||++++|||||+++
T Consensus 284 ~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 284 TCYGGIQSNSGLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp EEEESEEECTTTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred eEEEEEEcCCCCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 8985 76654 4689999999999999999999999999874
No 23
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=2.2e-52 Score=437.98 Aligned_cols=292 Identities=21% Similarity=0.293 Sum_probs=242.7
Q ss_pred eeeccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCCCccCCCCCCCCCCCCCCccccCCCCcccCCCC
Q 011749 135 IQGPIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCADCYQQADPIFEPTSSSSYSPLTCNTKQCQSLD 214 (478)
Q Consensus 135 ~~~p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~ 214 (478)
...|+.. ..+++|+++|.||||+|++.|+|||||+++||+|.+|..+.++.++.|||++|+||+...
T Consensus 128 ~~~~L~n---~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~~~~ydps~SsT~~~~~---------- 194 (453)
T 2bju_A 128 DNIELVD---FQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTYEKDG---------- 194 (453)
T ss_dssp EEEEEEE---ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGGSCCBCGGGCTTCEEEE----------
T ss_pred CceeeEe---cCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCCCCcCCCccCCceeECC----------
Confidence 4567764 246899999999999999999999999999999999984333568899999999999865
Q ss_pred CCCcCCCCceeEEEcCCCcEE------EEEECCeeeeeeEEEEEEcCC--CC-c--cCCCeEEecCCCCCCcc-------
Q 011749 215 ESECRNNTCLYEVSYGDGSYT------TVTLGSASVDNIAIGCGHNNE--GL-F--VGAAGLLGLGGGLLSFP------- 276 (478)
Q Consensus 215 ~~~C~~~~c~y~~~Ygdgs~~------tltlg~~~v~~~~fGc~~~~~--g~-~--~~~~GIlGLg~~~~S~~------- 276 (478)
|.|.+.|+||+.. +|++|+..++ +.|||++... +. | ...+||||||++.++..
T Consensus 195 --------~~~~i~YgdGs~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~ 265 (453)
T 2bju_A 195 --------TKVEMNYVSGTVSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVV 265 (453)
T ss_dssp --------EEEEEECSSSEEEEEEEEEEEEETTEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHH
T ss_pred --------cEEEEEcCCCCeEEEEEEEEEEEeCcEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHH
Confidence 8999999999866 9999999999 9999999886 54 2 35799999999877654
Q ss_pred ---cc--cCCCeeEEEeeCCCCCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCccccc
Q 011749 277 ---SQ--INASTFSYCLVDRDSDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKI 347 (478)
Q Consensus 277 ---sq--l~~~~FS~cL~~~~~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~ 347 (478)
+| +..++||+||.+. +...|.|+||++|+. ++.|+|+.. ..+|.|.|+ |+||+ .+ +
T Consensus 266 ~L~~qg~i~~~~FS~~L~~~-~~~~G~l~fGg~D~~~y~G~l~~~pv~~----~~~w~V~l~-I~Vgg-~~-~------- 330 (453)
T 2bju_A 266 ELKNQNKIENALFTFYLPVH-DKHTGFLTIGGIEERFYEGPLTYEKLNH----DLYWQITLD-AHVGN-IM-L------- 330 (453)
T ss_dssp HHHHTTSSSSCEEEEECCBT-TTBCEEEEESSCCGGGEEEEEEEEEEEE----ETTEEEEEE-EEETT-EE-E-------
T ss_pred HHHHCCCCCCCEEEEEeCCC-CCCCeEEEECCCCHHHcCCceEEEecCC----CceEEEEEE-EEECc-EE-e-------
Confidence 23 4479999999765 345799999999976 799999986 468999999 99999 33 1
Q ss_pred ccCCCCcEEEccCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCCCCccccceEEEEeCCCcEEEeCCCc
Q 011749 348 DESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKN 427 (478)
Q Consensus 348 ~~~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~~~~l~~~~ 427 (478)
....+||||||++++||+++|++|++++.+. +...+..+..+|+. . .+|+|+|+| +|++++||+++
T Consensus 331 ---~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~----~~~~g~~~~v~C~~-~-----~~P~itf~f-gg~~~~l~~~~ 396 (453)
T 2bju_A 331 ---EKANCIVDSGTSAITVPTDFLNKMLQNLDVI----KVPFLPFYVTLCNN-S-----KLPTFEFTS-ENGKYTLEPEY 396 (453)
T ss_dssp ---EEEEEEECTTCCSEEECHHHHHHHTTTSSCE----ECTTSSCEEEETTC-T-----TCCCEEEEC-SSCEEEECHHH
T ss_pred ---ccccEEEcCCCCeEecCHHHHHHHHHHhCCc----ccCCCceEEEecCC-C-----CCCcEEEEE-CCEEEEECHHH
Confidence 1357899999999999999999999888543 22333123346986 2 689999999 89999999999
Q ss_pred eEEEecC-CCcEEE-EEEeCC--CCceEecHhhhcceEEEEeCCCCEEEEeeCC
Q 011749 428 FLIPVDS-NGTFCF-AFAPTS--SSLSIIGNVQQQGTRVSFNLRNSLVGFTPNK 477 (478)
Q Consensus 428 yl~~~~~-~~~~Cl-~~~~~~--~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 477 (478)
|+++... ++..|+ +|.+.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 397 yi~~~~~~g~~~C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 397 YLQHIEDVGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp HEEECTTTSTTEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred hEeecccCCCceEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 9998753 346898 788765 3589999999999999999999999999864
No 24
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=5.5e-52 Score=418.49 Aligned_cols=282 Identities=21% Similarity=0.327 Sum_probs=236.6
Q ss_pred CCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCCCccCCCCCCCCCCCCCCccccCCCCcccCCCCCCCcCCCCcee
Q 011749 146 GSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCADCYQQADPIFEPTSSSSYSPLTCNTKQCQSLDESECRNNTCLY 225 (478)
Q Consensus 146 ~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~~~C~~~~c~y 225 (478)
.+.+|+++|.|| +|++.|+|||||+++||+|.+|..|.++.++.|||++|+ ++.. +|.|
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~------------------~~~~ 71 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSA-QKID------------------GATW 71 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTCCCBCCCTTC-EEEE------------------EEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCcccccCCCCCCccccC-CccC------------------CCeE
Confidence 368999999999 899999999999999999999998888889999999999 6532 3899
Q ss_pred EEEcCCCcE-E------EEEECCeeeeeeEEEEEEcCCCCc---cCCCeEEecCCCCCCcc-------------cccCCC
Q 011749 226 EVSYGDGSY-T------TVTLGSASVDNIAIGCGHNNEGLF---VGAAGLLGLGGGLLSFP-------------SQINAS 282 (478)
Q Consensus 226 ~~~Ygdgs~-~------tltlg~~~v~~~~fGc~~~~~g~~---~~~~GIlGLg~~~~S~~-------------sql~~~ 282 (478)
.+.|+||+. . +|+|++..++++.|||++...+.+ ...+||||||++.++.. +|+..+
T Consensus 72 ~i~Yg~Gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~i~~~ 151 (323)
T 1izd_A 72 SISYGDGSSASGDVYKDKVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSSLSEP 151 (323)
T ss_dssp EEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGGSSSS
T ss_pred EEEcCCCCeEEEEEEEEEEEECCEEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHhccCc
Confidence 999999984 3 999999999999999999876654 35799999999877652 356689
Q ss_pred eeEEEeeCCCCCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCcccccccCCCCcEEEc
Q 011749 283 TFSYCLVDRDSDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVD 358 (478)
Q Consensus 283 ~FS~cL~~~~~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~~~~iiD 358 (478)
+||+||.+ +..|.|+||++|+. ++.|+|+... ..+|.|.|++|+||+ .+. .....+|||
T Consensus 152 ~FS~~L~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~-~~~----------~~~~~aiiD 214 (323)
T 1izd_A 152 IFAVALKH---NAPGVYDFGYTDSSKYTGSITYTDVDNS---QGFWGFTADGYSIGS-DSS----------SDSITGIAD 214 (323)
T ss_dssp EEEEECCT---TSCEEEEESSCCTTSEEEEEEEEECBCT---TSSCEEEESEEEETT-EEE----------CCCEEEEEC
T ss_pred EEEEEccC---CCCCEEEECCcCccccccceEEEECCCC---CceEEEEECeEEECC-ccc----------CCCceEEEe
Confidence 99999964 24699999999986 7899999753 568999999999999 542 124579999
Q ss_pred cCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCCCCccccceEEEEeCCCcEEEeCCCceEEEecCCCcE
Q 011749 359 SGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNFLIPVDSNGTF 438 (478)
Q Consensus 359 SGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~~~~l~~~~yl~~~~~~~~~ 438 (478)
|||++++||+++|++|.+++.+.. .....+.+.++ |+. .+|+|+|+| ||++++||+++|+++.. ++..
T Consensus 215 SGTs~~~lp~~~~~~i~~~i~ga~--~~~~~g~~~~~-C~~-------~~P~i~f~f-gg~~~~i~~~~~~~~~~-~~~~ 282 (323)
T 1izd_A 215 TGTTLLLLDDSIVDAYYEQVNGAS--YDSSQGGYVFP-SSA-------SLPDFSVTI-GDYTATVPGEYISFADV-GNGQ 282 (323)
T ss_dssp TTCCSEEECHHHHHHHHTTSTTCE--EETTTTEEEEE-TTC-------CCCCEEEEE-TTEEEEECHHHHEEEEC-STTE
T ss_pred CCCcceeCCHHHHHHHHHhCCCcE--EcCcCCEEEEE-CCC-------CCceEEEEE-CCEEEecCHHHeEEecC-CCCe
Confidence 999999999999999998884322 11223444554 984 589999999 89999999999998864 3578
Q ss_pred EEE-EEeCC-CCceEecHhhhcceEEEEeCCCCEEEEeeCC
Q 011749 439 CFA-FAPTS-SSLSIIGNVQQQGTRVSFNLRNSLVGFTPNK 477 (478)
Q Consensus 439 Cl~-~~~~~-~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 477 (478)
|++ |.+.+ .+.||||+.|||++|+|||++++|||||+++
T Consensus 283 C~~~i~~~~~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 283 TFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp EEESEEECTTTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEcCCCCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 995 77754 4689999999999999999999999999864
No 25
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=4.6e-52 Score=421.83 Aligned_cols=290 Identities=21% Similarity=0.384 Sum_probs=235.1
Q ss_pred eeeccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCC--CC---------CccCCCCCCCCCCCCCCcccc
Q 011749 135 IQGPIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAP--CA---------DCYQQADPIFEPTSSSSYSPL 203 (478)
Q Consensus 135 ~~~p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~--C~---------~C~~~~~~~fdps~SsT~~~~ 203 (478)
+.+|+.++ +++|+++|.||||+|++.|+|||||+++||+|.. |. .|. .++.|||++|+||+..
T Consensus 3 v~~~l~~~----~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~--~~~~y~~~~SsT~~~~ 76 (342)
T 3pvk_A 3 VPVTLHNE----QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCK--QKGTYDPSGSSASQDL 76 (342)
T ss_dssp EEEEEEEC----SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGG--TTCCBCGGGCTTCEEE
T ss_pred cceEEecC----CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCC--CCCcCCCccCcceeec
Confidence 34555543 5899999999999999999999999999998553 53 453 5789999999999987
Q ss_pred CCCCcccCCCCCCCcCCCCceeEEEcCCCcEE-------EEEECCeeeeeeEEEEEEcCCCCccCCCeEEecCCCCC---
Q 011749 204 TCNTKQCQSLDESECRNNTCLYEVSYGDGSYT-------TVTLGSASVDNIAIGCGHNNEGLFVGAAGLLGLGGGLL--- 273 (478)
Q Consensus 204 ~C~s~~C~~~~~~~C~~~~c~y~~~Ygdgs~~-------tltlg~~~v~~~~fGc~~~~~g~~~~~~GIlGLg~~~~--- 273 (478)
. |.|.+.|+||+.. +|+|++..++++.|||++... ..+||||||++.+
T Consensus 77 ~------------------~~~~i~Yg~gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~----~~~GilGLg~~~~~~~ 134 (342)
T 3pvk_A 77 N------------------TPFKIGYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDSTS----IDQGILGVGYKTNEAG 134 (342)
T ss_dssp E------------------EEEEEECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES----SSSCEEECSCGGGCSS
T ss_pred C------------------CeEEEEecCCCeEEEEEEEEEEEECCEEecceEEEEEEccC----CCccEEEecCcccccc
Confidence 6 8999999999844 999999999999999998765 4699999999874
Q ss_pred ----Cccccc------CCCeeEEEeeCCCCCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEee
Q 011749 274 ----SFPSQI------NASTFSYCLVDRDSDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLP 339 (478)
Q Consensus 274 ----S~~sql------~~~~FS~cL~~~~~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~ 339 (478)
+++.|| ..++||+||.+. ....|.|+||++|+. ++.|+|+..+ .+|.|.|++|+|+++.+.
T Consensus 135 ~~~~~~~~~L~~qg~i~~~~fs~~l~~~-~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g~~~~ 209 (342)
T 3pvk_A 135 GSYDNVPVTLKKQGVIAKNAYSLYLNSP-DAATGQIIFGGVDNAKYSGSLIALPVTSD----RELRISLGSVEVSGKTIN 209 (342)
T ss_dssp CSSCCHHHHHHHTTSSSSSEEEEECCCT-TCSEEEEEETEEETTSBSSCCEEEECCCS----SSCEEEEEEEEETTEEEE
T ss_pred ccCCcHHHHHHhcCCCCCceEEEEeCCC-CCCCcEEEECccCccceeeeeEEeecCcc----ceEEEEEeEEEECCEEec
Confidence 444443 368999999654 345799999999876 7999999874 589999999999999886
Q ss_pred cCCcccccccCCCCcEEEccCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCCCCccccceEEEEeCCCc
Q 011749 340 ISETAFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGK 419 (478)
Q Consensus 340 i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~ 419 (478)
.+ +..+||||||++++||+++|++|.+++.+.........+. +..+|+. .|+|+|+|.+|+
T Consensus 210 ~~----------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~-~~~~C~~--------~p~i~f~f~~g~ 270 (342)
T 3pvk_A 210 TD----------NVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQDSNGNSF-YEVDCNL--------SGDVVFNFSKNA 270 (342)
T ss_dssp EE----------EEEEEECTTCSSEEECHHHHHHHHHHTTCEEEECTTSCEE-EEECSCC--------CSEEEEEESTTC
T ss_pred CC----------CceEEEeCCCCCeecCHHHHHHHHHHcCCeecccCCCceE-EEEecCC--------CCceEEEECCCC
Confidence 42 2468999999999999999999999997654321111112 3345874 599999996589
Q ss_pred EEEeCCCceEEEecC-CC---cEEE-EEEeCCCCceEecHhhhcceEEEEeCCCCEEEEeeCCC
Q 011749 420 VLPLPAKNFLIPVDS-NG---TFCF-AFAPTSSSLSIIGNVQQQGTRVSFNLRNSLVGFTPNKC 478 (478)
Q Consensus 420 ~~~l~~~~yl~~~~~-~~---~~Cl-~~~~~~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~C 478 (478)
+++||+++|+++... ++ ..|+ ++.+. +.+|||+.|||++|+|||++++|||||+++|
T Consensus 271 ~~~vp~~~~~~~~~~~~g~~~~~C~~~i~~~--~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~ 332 (342)
T 3pvk_A 271 KISVPASEFAASLQGDDGQPYDKCQLLFDVN--DANILGDNFLRSAYIVYDLDDNEISLAQVKY 332 (342)
T ss_dssp EEEEEGGGGEEC----------CEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEBCC
T ss_pred EEEEcHHHheeeccccCCCcCCeeEEEEeeC--CCeEeCHHHHhcEEEEEECCCCEEEEEecCC
Confidence 999999999987421 22 6797 56553 5799999999999999999999999999998
No 26
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=3.8e-52 Score=419.60 Aligned_cols=282 Identities=20% Similarity=0.362 Sum_probs=235.5
Q ss_pred CCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCCCccCCCCCCCCCCCCCCccccCCCCcccCCCCCCCcCCCCcee
Q 011749 146 GSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCADCYQQADPIFEPTSSSSYSPLTCNTKQCQSLDESECRNNTCLY 225 (478)
Q Consensus 146 ~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~~~C~~~~c~y 225 (478)
.+.+|+++|.|| +|++.|+|||||+++||+|.+|..|.++.++.|||++|+ ++.. +|.|
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~------------------~~~~ 71 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATG-KELS------------------GYTW 71 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCHHHHC-EEEE------------------EEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhccCCCCCCcccCC-cccC------------------CCeE
Confidence 368999999999 999999999999999999999999888889999999998 6543 3899
Q ss_pred EEEcCCCcE-E------EEEECCeeeeeeEEEEEEcCCCCc---cCCCeEEecCCCCCCcc-------------cccCCC
Q 011749 226 EVSYGDGSY-T------TVTLGSASVDNIAIGCGHNNEGLF---VGAAGLLGLGGGLLSFP-------------SQINAS 282 (478)
Q Consensus 226 ~~~Ygdgs~-~------tltlg~~~v~~~~fGc~~~~~g~~---~~~~GIlGLg~~~~S~~-------------sql~~~ 282 (478)
.+.|+||+. . +|++++..++++.|||++...+.+ ...+||||||++.++.. +|+..+
T Consensus 72 ~i~Yg~Gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~i~~~ 151 (323)
T 1bxo_A 72 SISYGDGSSASGNVFTDSVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSSLAQP 151 (323)
T ss_dssp EEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGGBSSS
T ss_pred EEEeCCCCeEEEEEEEEEEEECCEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHhcCCc
Confidence 999999984 3 999999999999999999876654 35799999999877653 356689
Q ss_pred eeEEEeeCCCCCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCcccccccCCCCcEEEc
Q 011749 283 TFSYCLVDRDSDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVD 358 (478)
Q Consensus 283 ~FS~cL~~~~~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~~~~iiD 358 (478)
+||+||.+ +..|.|+||++|+. ++.|+|+..+ ..+|.|.|++|+||+ +. .....+|||
T Consensus 152 ~FS~~L~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~--~~----------~~~~~aiiD 213 (323)
T 1bxo_A 152 LFAVALKH---QQPGVYDFGFIDSSKYTGSLTYTGVDNS---QGFWSFNVDSYTAGS--QS----------GDGFSGIAD 213 (323)
T ss_dssp EEEEECCS---SSCEEEEESSCCGGGBSSCCEEEECBCT---TSSCEEEEEEEEETT--EE----------EEEEEEEEC
T ss_pred EEEEEEeC---CCCceEEEeCcChhhccCceEEEECCCC---CCeEEEEEeeEEECC--cc----------CCCceEEEe
Confidence 99999964 24699999999975 7999999754 468999999999999 21 123578999
Q ss_pred cCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCCCCccccceEEEEeCCCcEEEeCCCceEEEecCCCcE
Q 011749 359 SGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNFLIPVDSNGTF 438 (478)
Q Consensus 359 SGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~~~~l~~~~yl~~~~~~~~~ 438 (478)
|||++++||+++|++|++++.+.. .....+.+.+ +|+. .+|+|+|+| +|++++||+++|+++...+...
T Consensus 214 SGTs~~~lP~~~~~~l~~~i~~a~--~~~~~g~~~~-~C~~-------~~P~i~f~f-gg~~~~l~~~~~~~~~~~~~~~ 282 (323)
T 1bxo_A 214 TGTTLLLLDDSVVSQYYSQVSGAQ--QDSNAGGYVF-DCST-------NLPDFSVSI-SGYTATVPGSLINYGPSGDGST 282 (323)
T ss_dssp TTCSSEEECHHHHHHHHTTSTTCE--EETTTTEEEE-CTTC-------CCCCEEEEE-TTEEEEECHHHHEEEECSSSSC
T ss_pred CCCCceeCCHHHHHHHHHhCCCce--EcCcCCEEEE-ECCC-------CCceEEEEE-CCEEEEECHHHeEEeccCCCCe
Confidence 999999999999999999884332 1122344445 4984 589999999 8999999999999876433468
Q ss_pred EEE-EEeCC-CCceEecHhhhcceEEEEeCCCCEEEEeeCC
Q 011749 439 CFA-FAPTS-SSLSIIGNVQQQGTRVSFNLRNSLVGFTPNK 477 (478)
Q Consensus 439 Cl~-~~~~~-~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 477 (478)
|++ |.+.+ .+.||||+.|||++|+|||++++|||||+++
T Consensus 283 C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 283 CLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp EEESEEECTTCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEEEEECCCCCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 985 77654 4689999999999999999999999999874
No 27
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=1.2e-51 Score=417.18 Aligned_cols=290 Identities=17% Similarity=0.251 Sum_probs=241.5
Q ss_pred eeeccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCC--CccCCCCCCCCCCCCCCccccCCCCcccCC
Q 011749 135 IQGPIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCA--DCYQQADPIFEPTSSSSYSPLTCNTKQCQS 212 (478)
Q Consensus 135 ~~~p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~--~C~~~~~~~fdps~SsT~~~~~C~s~~C~~ 212 (478)
+..|+.+ ..+.+|+++|.|| +|++.|+|||||+++||+|.+|. .|..+.++.|||++| ||+...
T Consensus 7 ~~~~l~n---~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~~~y~~~~S-T~~~~~-------- 72 (330)
T 1yg9_A 7 LYKLVHV---FINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKP-KYISDG-------- 72 (330)
T ss_dssp SCSCEEE---EECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTCCCCCCSSC-EEEEEE--------
T ss_pred eEeeeec---CCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcccccCccCCCCC-ceEECC--------
Confidence 3456654 2357899999999 99999999999999999999997 686567899999999 998864
Q ss_pred CCCCCcCCCCceeEEEcCCCcEE------EEEECCeeeeeeEEEEEEcCCCCc--cCCCeEEecCCCCCC-c--------
Q 011749 213 LDESECRNNTCLYEVSYGDGSYT------TVTLGSASVDNIAIGCGHNNEGLF--VGAAGLLGLGGGLLS-F-------- 275 (478)
Q Consensus 213 ~~~~~C~~~~c~y~~~Ygdgs~~------tltlg~~~v~~~~fGc~~~~~g~~--~~~~GIlGLg~~~~S-~-------- 275 (478)
+.|.+.|+||+.. +|++++..++++.|||++.....| ...+||||||++.++ .
T Consensus 73 ----------~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~ 142 (330)
T 1yg9_A 73 ----------NVQVKFFDTGSAVGRGIEDSLTISQLTTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNALKGKTVLE 142 (330)
T ss_dssp ----------EEEEEETTTEEEEEEEEEEEEEETTEEEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTTSCCCHHH
T ss_pred ----------CEEEEEECCceEEEEEEEEEEEECCEEEcCeEEEEEEEcccccccccCceEEEcCcchhccccCCCCHHH
Confidence 8999999999877 999999999999999999873333 257999999998887 2
Q ss_pred --ccc--cCCCeeEEEeeCCCC-CCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCcccc
Q 011749 276 --PSQ--INASTFSYCLVDRDS-DSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFK 346 (478)
Q Consensus 276 --~sq--l~~~~FS~cL~~~~~-~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~ 346 (478)
.+| + .++||+||.+..+ ...|.|+||++|+. ++.|+|+.. ..+|.|.|++|+|+++.+.
T Consensus 143 ~l~~qg~i-~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~~~~~~------- 210 (330)
T 1yg9_A 143 NFVEENLI-APVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVG----DDSWKFRLDGVKIGDTTVA------- 210 (330)
T ss_dssp HHHHTTSS-CSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSC----TTSCCEECSEEEETTEEEE-------
T ss_pred HHHhcCCC-CceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCC----CCEEEEEeCeEEECCEEEc-------
Confidence 233 5 8999999986532 23799999999976 799999984 5799999999999998764
Q ss_pred cccCCCCcEEEccCcceeeecHHHHHHHHHHHHhhccCCCCCCC--cc-ccccccccCCCCccccceEEEEeCCCcEEEe
Q 011749 347 IDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDG--VA-LFDTCYDFSSRSSVEVPTVSFHFPEGKVLPL 423 (478)
Q Consensus 347 ~~~~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~--~~-~~~~C~~~~~~~~~~~P~l~f~f~gg~~~~l 423 (478)
..+..+||||||++++||+++|++|++++.+... ..+ .+ .+ +|+... .+|+|+|+| +|++++|
T Consensus 211 ---~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~----~~g~~~~~~~-~C~~~~-----~~p~i~f~f-gg~~~~l 276 (330)
T 1yg9_A 211 ---PAGTQAIIDTSKAIIVGPKAYVNPINEAIGCVVE----KTTTRRICKL-DCSKIP-----SLPDVTFVI-NGRNFNI 276 (330)
T ss_dssp ---CTTCEEEECTTCSSEEEEHHHHHHHHHHHTCEEE----ECSSCEEEEE-CGGGGG-----GSCCEEEEE-TTEEEEE
T ss_pred ---CCCcEEEEecCCccccCCHHHHHHHHHHhCCccc----CCCceEEEEE-ECCCcc-----ccCcEEEEE-CCEEEEE
Confidence 1245799999999999999999999999965421 123 33 44 498643 689999999 8999999
Q ss_pred CCCceEEEecCCCcEEE-EEEeC-CCCceEecHhhhcceEEEEeCCCCEEEEeeCC
Q 011749 424 PAKNFLIPVDSNGTFCF-AFAPT-SSSLSIIGNVQQQGTRVSFNLRNSLVGFTPNK 477 (478)
Q Consensus 424 ~~~~yl~~~~~~~~~Cl-~~~~~-~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 477 (478)
|+++|+++. +..|+ +|.+. .++.||||+.|||++|+|||++++|||||+++
T Consensus 277 ~~~~y~~~~---~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 277 SSQYYIQQN---GNLCYSGFQPCGHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp CHHHHEEEE---TTEEEESEEEETTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CHHHhcccC---CCcEEEEEEeCCCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 999999986 46798 77764 34679999999999999999999999999875
No 28
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=2.3e-51 Score=423.22 Aligned_cols=300 Identities=24% Similarity=0.420 Sum_probs=237.7
Q ss_pred CeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCCCccCCCCCCCCCCCCCCccccCCCCcccCCCCCCCcCCCCceeE
Q 011749 147 SGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCADCYQQADPIFEPTSSSSYSPLTCNTKQCQSLDESECRNNTCLYE 226 (478)
Q Consensus 147 ~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~~~C~~~~c~y~ 226 (478)
+..|+++|.||||+|++.|+|||||+++||+|.+|..| ++.|||++|+||+... |.|.
T Consensus 12 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~----~~~f~~~~SsT~~~~~------------------~~~~ 69 (383)
T 2ewy_A 12 GRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYI----DTYFDTERSSTYRSKG------------------FDVT 69 (383)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTB----SCCCCGGGCTTCEEEE------------------EEEE
T ss_pred CCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCcc----ccCcccccCccceeCC------------------ceEE
Confidence 36799999999999999999999999999999999776 5789999999999876 8999
Q ss_pred EEcCCCcEE------EEEECCe-eee-eeEEEEEEcCCCCcc---CCCeEEecCCCCCCcc------------cccC-CC
Q 011749 227 VSYGDGSYT------TVTLGSA-SVD-NIAIGCGHNNEGLFV---GAAGLLGLGGGLLSFP------------SQIN-AS 282 (478)
Q Consensus 227 ~~Ygdgs~~------tltlg~~-~v~-~~~fGc~~~~~g~~~---~~~GIlGLg~~~~S~~------------sql~-~~ 282 (478)
+.|+||++. +|+|++. .+. .+.|+|.+...+.|. ..+||||||++.++.+ +|.. .+
T Consensus 70 i~Yg~Gs~~G~~~~Dtv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i~~ 149 (383)
T 2ewy_A 70 VKYTQGSWTGFVGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANIPN 149 (383)
T ss_dssp EECSSCEEEEEEEEEEEEETTTEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTCCS
T ss_pred EEECCcEEEEEEEEEEEEECCCccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHccCCCc
Confidence 999999876 8999853 222 467888876666552 4799999999887642 3322 68
Q ss_pred eeEEEeeCC------CCCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCcccccccCCC
Q 011749 283 TFSYCLVDR------DSDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGN 352 (478)
Q Consensus 283 ~FS~cL~~~------~~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~ 352 (478)
+||+||... .....|.|+||++|+. ++.|+|+.. ..+|.|.|++|+||++.+.++...|. .
T Consensus 150 ~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~g~~~~~~~~~~~-----~ 220 (383)
T 2ewy_A 150 VFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKE----EWYYQIEILKLEIGGQSLNLDCREYN-----A 220 (383)
T ss_dssp CEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSS----BTTBBCCEEEEEETTEECCCCTTTTT-----S
T ss_pred ceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCC----CceEEEEEEEEEECCEEccccccccC-----C
Confidence 999999531 1234699999999875 799999987 46899999999999999876554432 3
Q ss_pred CcEEEccCcceeeecHHHHHHHHHHHHhhccCCCCCCCc--cccccccccCCCCccccceEEEEeCCC-----cEEEeCC
Q 011749 353 GGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGV--ALFDTCYDFSSRSSVEVPTVSFHFPEG-----KVLPLPA 425 (478)
Q Consensus 353 ~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~--~~~~~C~~~~~~~~~~~P~l~f~f~gg-----~~~~l~~ 425 (478)
..+||||||++++||+++|++|++++.+.........+. ....+|+.........+|+|+|+|.|+ .+++|++
T Consensus 221 ~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~ 300 (383)
T 2ewy_A 221 DKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRITILP 300 (383)
T ss_dssp SCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSSTTEEEEEEECH
T ss_pred ccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccccccccccccCCcccHhhCCcEEEEECCCCCCceEEEEECh
Confidence 579999999999999999999999998764311111111 123469976543334689999999543 3799999
Q ss_pred CceEEEecC--CCcEEEEE--EeCCCCceEecHhhhcceEEEEeCCCCEEEEeeCCC
Q 011749 426 KNFLIPVDS--NGTFCFAF--APTSSSLSIIGNVQQQGTRVSFNLRNSLVGFTPNKC 478 (478)
Q Consensus 426 ~~yl~~~~~--~~~~Cl~~--~~~~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~C 478 (478)
++|+++... .+..|++| .+. .+.||||+.|||++|+|||++++|||||+++|
T Consensus 301 ~~yi~~~~~~~~~~~C~~~~i~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c 356 (383)
T 2ewy_A 301 QLYIQPMMGAGLNYECYRFGISPS-TNALVIGATVMEGFYVIFDRAQKRVGFAASPC 356 (383)
T ss_dssp HHHEEEECCCTTCSEEEEESEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEECTT
T ss_pred HHheeecccCCCCceeEEEEecCC-CCcEEEChHHhCCeeEEEECCCCeEEEEeccC
Confidence 999988642 35689864 443 45799999999999999999999999999999
No 29
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=3.3e-51 Score=423.73 Aligned_cols=300 Identities=21% Similarity=0.359 Sum_probs=238.7
Q ss_pred CeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCCCccCCCCCCCCCCCCCCccccCCCCcccCCCCCCCcCCCCceeE
Q 011749 147 SGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCADCYQQADPIFEPTSSSSYSPLTCNTKQCQSLDESECRNNTCLYE 226 (478)
Q Consensus 147 ~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~~~C~~~~c~y~ 226 (478)
+.+|+++|.||||+|++.|+|||||+++||+|.+|..| ++.|||++|+||+... |.|.
T Consensus 20 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~----~~~y~~~~SsT~~~~~------------------~~~~ 77 (395)
T 2qp8_A 20 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFL----HRYYQRQLSSTYRDLR------------------KGVY 77 (395)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTC----SCCCCGGGCTTCEEEE------------------EEEE
T ss_pred CceEEEEEEecCCCceEEEEEecCCCceEEECCCCccc----cCCcCcccCCCceeCC------------------ceEE
Confidence 46899999999999999999999999999999998655 5789999999999876 8999
Q ss_pred EEcCCCcEE------EEEEC-Ceeee-eeEEEEEEcCCCCcc---CCCeEEecCCCCCCcc------------cccC-CC
Q 011749 227 VSYGDGSYT------TVTLG-SASVD-NIAIGCGHNNEGLFV---GAAGLLGLGGGLLSFP------------SQIN-AS 282 (478)
Q Consensus 227 ~~Ygdgs~~------tltlg-~~~v~-~~~fGc~~~~~g~~~---~~~GIlGLg~~~~S~~------------sql~-~~ 282 (478)
+.|+||+.. +|+|+ +..++ .+.|+|.....+.|. ..+||||||++.++.+ +|.. .+
T Consensus 78 i~Yg~Gs~~G~~~~Dtv~ig~g~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~~ 157 (395)
T 2qp8_A 78 VPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPN 157 (395)
T ss_dssp EECSSCEEEEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCS
T ss_pred EEECCcEEEEEEEeEEEEECCCCCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHHHHHccCCcc
Confidence 999999876 89998 45444 367888876655552 4799999999877543 2222 47
Q ss_pred eeEEEeeCCC---------CCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCccccccc
Q 011749 283 TFSYCLVDRD---------SDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDE 349 (478)
Q Consensus 283 ~FS~cL~~~~---------~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~ 349 (478)
+||+||.+.. ....|.|+||++|+. ++.|+|+.. ..+|.|.|++|+||++.+.++...|.
T Consensus 158 ~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~g~~~~~~~~~~~--- 230 (395)
T 2qp8_A 158 LFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVIIVRVEINGQDLKMDCKEYN--- 230 (395)
T ss_dssp CEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS----BTTBBCCEEEEEETTEECCCCGGGGG---
T ss_pred eEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCC----CceEEEEEEEEEECCEEcccCccccC---
Confidence 9999996420 134699999999976 789999976 46899999999999999877655442
Q ss_pred CCCCcEEEccCcceeeecHHHHHHHHHHHHhhccCCCCCCCc--cccccccccCCCCccccceEEEEeCCCc-----EEE
Q 011749 350 SGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGV--ALFDTCYDFSSRSSVEVPTVSFHFPEGK-----VLP 422 (478)
Q Consensus 350 ~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~--~~~~~C~~~~~~~~~~~P~l~f~f~gg~-----~~~ 422 (478)
...+||||||++++||+++|++|++++.+.+.......+. ....+|+.........+|+|+|+|.|+. +|+
T Consensus 231 --~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~ 308 (395)
T 2qp8_A 231 --YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRIT 308 (395)
T ss_dssp --SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEE
T ss_pred --CceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccccccchHhhCCcEEEEEccCCCCceEEEE
Confidence 3579999999999999999999999998765321111111 1134699866444456999999995543 799
Q ss_pred eCCCceEEEecC---CCcEEE--EEEeCCCCceEecHhhhcceEEEEeCCCCEEEEeeCCC
Q 011749 423 LPAKNFLIPVDS---NGTFCF--AFAPTSSSLSIIGNVQQQGTRVSFNLRNSLVGFTPNKC 478 (478)
Q Consensus 423 l~~~~yl~~~~~---~~~~Cl--~~~~~~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~C 478 (478)
|++++|+++... ....|+ ++.+. .+.||||+.|||++|+|||++++|||||+++|
T Consensus 309 l~p~~yi~~~~~~~~~~~~C~~~~i~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c 368 (395)
T 2qp8_A 309 ILPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSAC 368 (395)
T ss_dssp ECHHHHEEEECCTTCCSCEEEEECEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEEETT
T ss_pred ECHHHhEeecccCCCCCceEEEEEecCC-CCcEEEChHHhCCeeEEEECCCCEEEEEeccC
Confidence 999999998653 235897 45543 35799999999999999999999999999999
No 30
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=5.5e-51 Score=427.63 Aligned_cols=289 Identities=20% Similarity=0.314 Sum_probs=241.4
Q ss_pred eeeccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCC--CccCCCCCCCCCCCCCCccccCCCCcccCC
Q 011749 135 IQGPIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCA--DCYQQADPIFEPTSSSSYSPLTCNTKQCQS 212 (478)
Q Consensus 135 ~~~p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~--~C~~~~~~~fdps~SsT~~~~~C~s~~C~~ 212 (478)
...|+.+. .+.+|+++|.||||||++.|++||||+++||+|..|. .| ..++.|||++|+||+...
T Consensus 127 ~~~pL~n~---~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C--~~~~~ydps~SsT~~~~~-------- 193 (451)
T 3qvc_A 127 DNVELKDL---ANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESC--ESKNHYDSSKSKTYEKDD-------- 193 (451)
T ss_dssp CCCCGGGG---BCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGG--TTSCCBCGGGCTTCEEEE--------
T ss_pred Cccceeec---CCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCcccc--CCCCCCCCCCCcccccCC--------
Confidence 45677653 3689999999999999999999999999999999996 56 467899999999999865
Q ss_pred CCCCCcCCCCceeEEEcCCCcEE------EEEECCeeeeeeEEEEEEc----CCCCcc--CCCeEEecCCCCCCcc----
Q 011749 213 LDESECRNNTCLYEVSYGDGSYT------TVTLGSASVDNIAIGCGHN----NEGLFV--GAAGLLGLGGGLLSFP---- 276 (478)
Q Consensus 213 ~~~~~C~~~~c~y~~~Ygdgs~~------tltlg~~~v~~~~fGc~~~----~~g~~~--~~~GIlGLg~~~~S~~---- 276 (478)
|.|.+.|+||+.. +|++|+..++ +.|||++. ..+ |. ..+||||||++.++..
T Consensus 194 ----------~~f~i~YgdGs~~G~~~~Dtv~igg~~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~s~~~~~~ 261 (451)
T 3qvc_A 194 ----------TPVKLTSKAGTISGIFSKDLVTIGKLSVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDLSIGSIDP 261 (451)
T ss_dssp ----------EEEEEECSSEEEEEEEEEEEEEETTEEEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCSSSSCCCC
T ss_pred ----------CEEEEEECCCEEEEEEEEEEEEECCEEEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCcccccCCCC
Confidence 8999999999955 9999999999 99999998 666 43 4799999999876532
Q ss_pred ------cc--cCCCeeEEEeeCCCCCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCcc
Q 011749 277 ------SQ--INASTFSYCLVDRDSDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETA 344 (478)
Q Consensus 277 ------sq--l~~~~FS~cL~~~~~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~ 344 (478)
+| +..++||+||.+. ....|.|+||++|+. ++.|+|+.. ..+|.|.++ |+||++ .
T Consensus 262 ~~~~L~~qg~I~~~~FS~~L~~~-~~~~G~l~fGgiD~s~y~G~l~~~pv~~----~~~w~v~l~-I~Vgg~-~------ 328 (451)
T 3qvc_A 262 YIVELKTQNKIEQAVYSIYLPPE-NKNKGYLTIGGIEERFFDGPLNYEKLNH----DLMWQVDLD-VHFGNV-S------ 328 (451)
T ss_dssp HHHHHHHTTSSSSSEEEEECCTT-CTTEEEEEESSCCGGGEEEEEEEEECSS----TTSSEEEEE-EEETTE-E------
T ss_pred HHHHHHHcCCCCCCEEEEEEcCC-CCCCCEEEECCcchhhcCCceEEEEccc----CCeeEEEEE-EEECCc-c------
Confidence 23 4578999999765 345799999999987 799999985 579999999 999998 1
Q ss_pred cccccCCCCcEEEccCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCCCCccccceEEEEeCCCcEEEeC
Q 011749 345 FKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLP 424 (478)
Q Consensus 345 ~~~~~~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~~~~l~ 424 (478)
.....+||||||++++||++++++|.+++.+... ...+.+.+ +|. .. .+|+|+|+| +|++++||
T Consensus 329 -----~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~---~~~g~y~v-~C~-~~-----~~P~itf~f-gg~~i~lp 392 (451)
T 3qvc_A 329 -----SKKANVILDSATSVITVPTEFFNQFVESASVFKV---PFLSLYVT-TCG-NT-----KLPTLEYRS-PNKVYTLE 392 (451)
T ss_dssp -----EEEEEEEECTTBSSEEECHHHHHHHHTTTTCEEC---TTSSCEEE-ETT-CT-----TCCCEEEEE-TTEEEEEC
T ss_pred -----CCCceEEEeCCCccccCCHHHHHHHHHHcCCeec---CCCCeEEe-eCC-cC-----cCCcEEEEE-CCEEEEEc
Confidence 1235789999999999999999999999865432 12344444 587 32 689999999 89999999
Q ss_pred CCceEEEecC-CCcEEE-EEEeCC--CCceEecHhhhcceEEEEeCCCCEEEEeeCC
Q 011749 425 AKNFLIPVDS-NGTFCF-AFAPTS--SSLSIIGNVQQQGTRVSFNLRNSLVGFTPNK 477 (478)
Q Consensus 425 ~~~yl~~~~~-~~~~Cl-~~~~~~--~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 477 (478)
+++|+++... ++..|+ +|.+.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 393 ~~~yi~~~~~~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 393 PKQYLEPLENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp HHHHEEECTTTSTTEEEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred HHHheeecccCCCCeEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 9999998653 346898 787765 4689999999999999999999999999875
No 31
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=5.5e-50 Score=406.53 Aligned_cols=286 Identities=22% Similarity=0.370 Sum_probs=231.7
Q ss_pred eeccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCCCccCCCCCCCCCCCCCCccccCCCCcccCCCCC
Q 011749 136 QGPIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCADCYQQADPIFEPTSSSSYSPLTCNTKQCQSLDE 215 (478)
Q Consensus 136 ~~p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~ 215 (478)
++|+.+. +.+|+++|.||||+|++.|+|||||+++||+|. +.|||++|+++..
T Consensus 4 ~~~l~n~----~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~----------~~y~~s~Ss~~~~------------- 56 (340)
T 1wkr_A 4 SVPATNQ----LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD----------KSYVKTSTSSATS------------- 56 (340)
T ss_dssp EEEEEEC----SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS----------SCCCCCTTCEEEE-------------
T ss_pred cEeeecc----CcEEEEEEEECCCCcEEEEEEeCCChhheecCC----------CccCCcCCccccC-------------
Confidence 4677764 469999999999999999999999999999874 4799998876532
Q ss_pred CCcCCCCceeEEEcCCCcEE------EEEECCeeeeeeEEEEEEcCCCCccCCCeEEecCCCCCCcc-------------
Q 011749 216 SECRNNTCLYEVSYGDGSYT------TVTLGSASVDNIAIGCGHNNEGLFVGAAGLLGLGGGLLSFP------------- 276 (478)
Q Consensus 216 ~~C~~~~c~y~~~Ygdgs~~------tltlg~~~v~~~~fGc~~~~~g~~~~~~GIlGLg~~~~S~~------------- 276 (478)
|.|.+.|+||+.. +|+|++..++++.|||++...+ |...+||||||++.+++.
T Consensus 57 -------~~~~i~Yg~Gs~~G~~~~Dtv~~g~~~v~~~~fg~~~~~~~-~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~ 128 (340)
T 1wkr_A 57 -------DKVSVTYGSGSFSGTEYTDTVTLGSLTIPKQSIGVASRDSG-FDGVDGILGVGPVDLTVGTLSPHTSTSIPTV 128 (340)
T ss_dssp -------EEEEEECSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEES-CTTCSEEEECSCGGGGTTSEESCTTCCCCCH
T ss_pred -------ceEEEEECCcEEEEEEEEEEEEECCEEEcceEEEEEEccCC-CcCCCcEEECCccccccccccccccccCCCH
Confidence 8999999999866 9999999999999999998766 557899999999877652
Q ss_pred -cc------cCCCeeEEEeeCCC--CCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcC-eEeecCC
Q 011749 277 -SQ------INASTFSYCLVDRD--SDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGG-DLLPISE 342 (478)
Q Consensus 277 -sq------l~~~~FS~cL~~~~--~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg-~~l~i~~ 342 (478)
.+ +..++||+||.+.. ....|.|+||++|+. ++.|+|+..++....+|.|. ++|+|++ +.+..
T Consensus 129 ~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~~-- 205 (340)
T 1wkr_A 129 TDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSILS-- 205 (340)
T ss_dssp HHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEEE--
T ss_pred HHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEccC--
Confidence 11 33689999997532 234699999999975 79999998865446799999 9999998 77641
Q ss_pred cccccccCCCCcEEEccCcceeeecHHHHHHHHHHHHhhccCCCCCCCccccccccccCCCCccccceEEEEeCCCcEEE
Q 011749 343 TAFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLP 422 (478)
Q Consensus 343 ~~~~~~~~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~~~~ 422 (478)
.+.+||||||++++||+++|++|.+++.+... ...+.+.+ +|.... .+|+|+|+| +|++++
T Consensus 206 ---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~---~~~g~~~~-~C~~~~-----~~p~i~f~f-~g~~~~ 266 (340)
T 1wkr_A 206 ---------STAGIVDTGTTLTLIASDAFAKYKKATGAVAD---NNTGLLRL-TTAQYA-----NLQSLFFTI-GGQTFE 266 (340)
T ss_dssp ---------EEEEEECTTBCSEEECHHHHHHHHHHHTCEEC---TTTSSEEE-CHHHHH-----TCCCEEEEE-TTEEEE
T ss_pred ---------CCeEEEeCCcccccCCHHHHHHHHHhhCCEEc---CCCCeEEe-eccccc-----cCCcEEEEE-CCEEEE
Confidence 14689999999999999999999998865432 22233344 487543 589999999 899999
Q ss_pred eCCCceEEEecC------CCcEEE-EEEeCC-----CCceEecHhhhcceEEEEeCCCCEEEEeeCCC
Q 011749 423 LPAKNFLIPVDS------NGTFCF-AFAPTS-----SSLSIIGNVQQQGTRVSFNLRNSLVGFTPNKC 478 (478)
Q Consensus 423 l~~~~yl~~~~~------~~~~Cl-~~~~~~-----~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~C 478 (478)
|++++|+++... ....|+ +|.+.. +..||||+.|||++|+|||++++|||||+++|
T Consensus 267 i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~ 334 (340)
T 1wkr_A 267 LTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSF 334 (340)
T ss_dssp ECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTT
T ss_pred EcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCC
Confidence 999999987541 123575 776521 24699999999999999999999999999987
No 32
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=8.5e-50 Score=414.09 Aligned_cols=301 Identities=21% Similarity=0.345 Sum_probs=237.2
Q ss_pred CeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCCCccCCCCCCCCCCCCCCccccCCCCcccCCCCCCCcCCCCceeE
Q 011749 147 SGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCADCYQQADPIFEPTSSSSYSPLTCNTKQCQSLDESECRNNTCLYE 226 (478)
Q Consensus 147 ~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~~~C~~~~c~y~ 226 (478)
..+|+++|.||||+|++.|+|||||+++||+|.+| | +.++.|||++|+||+... |.|.
T Consensus 27 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~--~~~~~y~~~~SsT~~~~~------------------~~~~ 84 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--P--FLHRYYQRQLSSTYRDLR------------------KGVY 84 (402)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--T--TCSCCCCGGGCTTCEEEE------------------EEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--C--cccCCcCcccCcccccCC------------------CEEE
Confidence 36899999999999999999999999999999988 4 357899999999999875 8999
Q ss_pred EEcCCCcEE------EEEEC-Ceeeee-eEEEEEEcCCCCc---cCCCeEEecCCCCCCccc--------ccC-----CC
Q 011749 227 VSYGDGSYT------TVTLG-SASVDN-IAIGCGHNNEGLF---VGAAGLLGLGGGLLSFPS--------QIN-----AS 282 (478)
Q Consensus 227 ~~Ygdgs~~------tltlg-~~~v~~-~~fGc~~~~~g~~---~~~~GIlGLg~~~~S~~s--------ql~-----~~ 282 (478)
+.|++|+.. +|+|+ +..++. +.|+|.+...+.| ...+||||||++.++... +|. .+
T Consensus 85 i~Yg~Gs~~G~~~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~~ 164 (402)
T 3vf3_A 85 VPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPN 164 (402)
T ss_dssp EECSSCEEEEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCS
T ss_pred EEECcEEEEEEEEEEEEEECCccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCcc
Confidence 999999977 89998 444443 4588887766654 247999999998776542 221 47
Q ss_pred eeEEEeeCC----C-----CCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCccccccc
Q 011749 283 TFSYCLVDR----D-----SDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDE 349 (478)
Q Consensus 283 ~FS~cL~~~----~-----~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~ 349 (478)
+||+||.+. + ....|.|+||++|+. ++.|+|+.. ..+|.|.+++|+|+++.+.++...+.
T Consensus 165 ~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~g~~~~~~~~~~~--- 237 (402)
T 3vf3_A 165 LFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVIIVRVEINGQDLKMDCKEYN--- 237 (402)
T ss_dssp CEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSS----BTTBEECEEEEEETTEECCCCGGGGG---
T ss_pred ceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCc----CcEEEEEEeEEEECCEEecccccccC---
Confidence 999999642 1 234699999999986 789999986 47899999999999999877554432
Q ss_pred CCCCcEEEccCcceeeecHHHHHHHHHHHHhhccCCCCCCCcc--ccccccccCCCCccccceEEEEeCCCc-----EEE
Q 011749 350 SGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVA--LFDTCYDFSSRSSVEVPTVSFHFPEGK-----VLP 422 (478)
Q Consensus 350 ~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~--~~~~C~~~~~~~~~~~P~l~f~f~gg~-----~~~ 422 (478)
...+||||||++++||+++|++|++++.+.....+...+.+ ++.+|+.........+|+|+|+|.|+. .++
T Consensus 238 --~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~ 315 (402)
T 3vf3_A 238 --YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRIT 315 (402)
T ss_dssp --SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEEEEEE
T ss_pred --CCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceEEEEecCCCCceEEEE
Confidence 45799999999999999999999999988753111111211 245799876544457999999995433 599
Q ss_pred eCCCceEEEecCC---CcEEEEEEe-CCCCceEecHhhhcceEEEEeCCCCEEEEeeCCC
Q 011749 423 LPAKNFLIPVDSN---GTFCFAFAP-TSSSLSIIGNVQQQGTRVSFNLRNSLVGFTPNKC 478 (478)
Q Consensus 423 l~~~~yl~~~~~~---~~~Cl~~~~-~~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~C 478 (478)
|++++|+++.... ...|++|.. ...+.||||+.|||++|+|||++++|||||+++|
T Consensus 316 l~~~~yi~~~~~~~~~~~~C~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c 375 (402)
T 3vf3_A 316 ILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSAC 375 (402)
T ss_dssp ECHHHHEEECCCGGGTTEEEEEECEEEESSCEEECHHHHTTEEEEEEGGGTEEEEEEETT
T ss_pred ECHHHheehhccCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEeccc
Confidence 9999999986532 148986432 2246799999999999999999999999999999
No 33
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=2.7e-49 Score=416.69 Aligned_cols=300 Identities=21% Similarity=0.337 Sum_probs=240.1
Q ss_pred CeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCCCccCCCCCCCCCCCCCCccccCCCCcccCCCCCCCcCCCCceeE
Q 011749 147 SGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCADCYQQADPIFEPTSSSSYSPLTCNTKQCQSLDESECRNNTCLYE 226 (478)
Q Consensus 147 ~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~s~~C~~~~~~~C~~~~c~y~ 226 (478)
+.+|+++|.||||+|++.|+|||||+++||+|.+| | +.++.|||++|+||+... |.|.
T Consensus 73 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c--~~~~~y~~~~SsT~~~~~------------------~~~~ 130 (455)
T 3lpj_A 73 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--P--FLHRYYQRQLSSTYRDLR------------------KGVY 130 (455)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--T--TCSCCCCGGGCTTCEEEE------------------EEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--c--ccCCcccCCCCCCcccCC------------------ccEE
Confidence 45899999999999999999999999999999988 5 457899999999999876 8999
Q ss_pred EEcCCCcEE------EEEECC-eeee-eeEEEEEEcCCCCc---cCCCeEEecCCCCCCccc--------ccC-----CC
Q 011749 227 VSYGDGSYT------TVTLGS-ASVD-NIAIGCGHNNEGLF---VGAAGLLGLGGGLLSFPS--------QIN-----AS 282 (478)
Q Consensus 227 ~~Ygdgs~~------tltlg~-~~v~-~~~fGc~~~~~g~~---~~~~GIlGLg~~~~S~~s--------ql~-----~~ 282 (478)
+.|++|+.. +|+|++ ..+. .+.|+|++...+.| ...+||||||++.++... +|. .+
T Consensus 131 i~Yg~Gs~~G~~~~Dtv~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~~ 210 (455)
T 3lpj_A 131 VPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPN 210 (455)
T ss_dssp EECSSCEEEEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCS
T ss_pred EEeCCeEEEEEEEEEEEEECCCcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHccCCCc
Confidence 999999977 899983 3333 36789988776655 347999999998776532 221 47
Q ss_pred eeEEEeeCCC---------CCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCccccccc
Q 011749 283 TFSYCLVDRD---------SDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDE 349 (478)
Q Consensus 283 ~FS~cL~~~~---------~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~ 349 (478)
+||+||.+.. ....|.|+||++|+. ++.|+|+.. ..+|.|.+++|+||++.+.++...+.
T Consensus 211 ~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~g~~~~~~~~~~~--- 283 (455)
T 3lpj_A 211 LFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVIIVRVEINGQDLKMDCKEYN--- 283 (455)
T ss_dssp CEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS----BTTBBCCEEEEEETTEECCCCGGGGG---
T ss_pred eeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCC----CceeEEEEeEEEECCEEccccccccC---
Confidence 9999996421 234699999999986 789999986 47899999999999999877654432
Q ss_pred CCCCcEEEccCcceeeecHHHHHHHHHHHHhhccCCCCCCCc---cccccccccCCCCccccceEEEEeCCCc-----EE
Q 011749 350 SGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGV---ALFDTCYDFSSRSSVEVPTVSFHFPEGK-----VL 421 (478)
Q Consensus 350 ~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~---~~~~~C~~~~~~~~~~~P~l~f~f~gg~-----~~ 421 (478)
...+||||||++++||+++|++|+++|.+.... ...... .++.+|+.........+|+|+|+|.|+. +|
T Consensus 284 --~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~-~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~ 360 (455)
T 3lpj_A 284 --YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASST-EKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRI 360 (455)
T ss_dssp --SSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTT-SCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEE
T ss_pred --CCeEEEECCCcceeCCHHHHHHHHHHhhhhccc-cccCcccccCcceecccccCCchhcCCcEEEEEcCCCcCceEEE
Confidence 457999999999999999999999999887531 111111 1245699876544456999999995443 59
Q ss_pred EeCCCceEEEecCC---CcEEEEEEe-CCCCceEecHhhhcceEEEEeCCCCEEEEeeCCC
Q 011749 422 PLPAKNFLIPVDSN---GTFCFAFAP-TSSSLSIIGNVQQQGTRVSFNLRNSLVGFTPNKC 478 (478)
Q Consensus 422 ~l~~~~yl~~~~~~---~~~Cl~~~~-~~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~C 478 (478)
+|++++|+++.... ...|++|.. ...+.||||+.|||++|+|||++++|||||+++|
T Consensus 361 ~l~~~~yi~~~~~~~~~~~~C~~f~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c 421 (455)
T 3lpj_A 361 TILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSAC 421 (455)
T ss_dssp EECHHHHEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETT
T ss_pred EECHHHheEeccCCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEeccc
Confidence 99999999987643 248997532 2246799999999999999999999999999999
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=3.9e-39 Score=311.16 Aligned_cols=210 Identities=25% Similarity=0.436 Sum_probs=177.2
Q ss_pred eeccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCC---CccCCCCCCCCCCCCCCccccCCCCcccCC
Q 011749 136 QGPIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCA---DCYQQADPIFEPTSSSSYSPLTCNTKQCQS 212 (478)
Q Consensus 136 ~~p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~---~C~~~~~~~fdps~SsT~~~~~C~s~~C~~ 212 (478)
.+|+.+ ..+++|+++|.||||+|++.|+|||||+++||+|.+|. .|. .++.|||++|+||+...
T Consensus 4 ~~~l~n---~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~--~~~~y~~~~SsT~~~~~-------- 70 (239)
T 1b5f_A 4 VVALTN---DRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACR--AHSMYESSDSSTYKENG-------- 70 (239)
T ss_dssp EEEEEE---ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHH--TSCCBCGGGCTTCEEEE--------
T ss_pred eeeeee---cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccC--CCCCCCCccCCCeeeCC--------
Confidence 356655 34689999999999999999999999999999999997 586 46799999999999865
Q ss_pred CCCCCcCCCCceeEEEcCCCcEE------EEEECCeeeeeeEEEEEEcCCCC-c--cCCCeEEecCCCCCCcc------c
Q 011749 213 LDESECRNNTCLYEVSYGDGSYT------TVTLGSASVDNIAIGCGHNNEGL-F--VGAAGLLGLGGGLLSFP------S 277 (478)
Q Consensus 213 ~~~~~C~~~~c~y~~~Ygdgs~~------tltlg~~~v~~~~fGc~~~~~g~-~--~~~~GIlGLg~~~~S~~------s 277 (478)
|.|.+.|++|+.. +|++++..++++.|||++...+. | ...+||||||++.++.+ +
T Consensus 71 ----------~~~~i~Yg~Gs~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~~~l~~ 140 (239)
T 1b5f_A 71 ----------TFGAIIYGTGSITGFFSQDSVTIGDLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVWYNMLN 140 (239)
T ss_dssp ----------EEEEEECSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHHHHHHH
T ss_pred ----------cEEEEEECCCcEEEEEEEEEEEECCcEEccEEEEEEEeccCccccccCcceEEecCccccccHHHHHHHH
Confidence 8899999999866 89999999999999999987642 2 35799999999998733 3
Q ss_pred c--cCCCeeEEEeeCCC-CCCceEEEeCCCCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCcccccccC
Q 011749 278 Q--INASTFSYCLVDRD-SDSTSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDES 350 (478)
Q Consensus 278 q--l~~~~FS~cL~~~~-~~~~g~L~fG~~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~ 350 (478)
| +..++||+||.+.. ....|.|+||++|+. ++.|+|+.. ..+|.|.|++|+|+++.+.+..
T Consensus 141 qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~~-------- 208 (239)
T 1b5f_A 141 QGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTY----QYYWQFGIGDVLIGDKSTGFCA-------- 208 (239)
T ss_dssp TTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEE----ETTEEEEECCEEETTEECCTTT--------
T ss_pred CCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEccc----CCeEEEEeeEEEECCEEecccC--------
Confidence 3 45799999997642 234699999999976 789999986 4689999999999999876432
Q ss_pred CCCcEEEccCcceeeecHHHHHHHHHHHHh
Q 011749 351 GNGGIIVDSGTAVTRLQTETYNALRDAFVR 380 (478)
Q Consensus 351 ~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~ 380 (478)
....+||||||++++||+++|++|.+++.+
T Consensus 209 ~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 209 PGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp TCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred CCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 245799999999999999999999998853
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=1.4e-35 Score=286.24 Aligned_cols=214 Identities=21% Similarity=0.361 Sum_probs=173.6
Q ss_pred CCeeeeeeEEEEEEcCCCC-cc--CCCeEEecCCCCCCcc----------cc--cCCCeeEEEeeCCCCC-CceEEEeCC
Q 011749 240 GSASVDNIAIGCGHNNEGL-FV--GAAGLLGLGGGLLSFP----------SQ--INASTFSYCLVDRDSD-STSTLEFDS 303 (478)
Q Consensus 240 g~~~v~~~~fGc~~~~~g~-~~--~~~GIlGLg~~~~S~~----------sq--l~~~~FS~cL~~~~~~-~~g~L~fG~ 303 (478)
|+..+++|.|||++...+. |. ..+||||||++.++.. +| +..++||+||.+.... ..|.|+||+
T Consensus 1 gg~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg 80 (241)
T 1lya_B 1 GGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGG 80 (241)
T ss_dssp CCEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETS
T ss_pred CCeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECC
Confidence 4678999999999998764 32 5799999999887643 22 4579999999765322 279999999
Q ss_pred CCCC----CCeeeecccCCCCCeeEEEEEeEEEEcCeEeecCCcccccccCCCCcEEEccCcceeeecHHHHHHHHHHHH
Q 011749 304 SLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFV 379 (478)
Q Consensus 304 ~d~~----~~~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~ 379 (478)
+|+. ++.|+|+.. ..+|.|.+++|+|+++.+.. .....+||||||++++||+++|++|.+++.
T Consensus 81 ~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~---------~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 147 (241)
T 1lya_B 81 TDSKYYKGSLSYLNVTR----KAYWQVHLDQVEVASGLTLC---------KEGCEAIVDTGTSLMVGPVDEVRELQKAIG 147 (241)
T ss_dssp CCGGGEEEEEEEEECSS----BTTBEEEEEEEEETTSCEES---------TTCEEEEECTTCSSEEECHHHHHHHHHHHT
T ss_pred cCHHHcCCceEEEECcc----ccEEEEEEeEEEECCeeEec---------cCCCEEEEECCCccccCCHHHHHHHHHHhC
Confidence 9976 799999986 47899999999999987531 234579999999999999999999999996
Q ss_pred hhccCCCCCCCccccccccccCCCCccccceEEEEeCCCcEEEeCCCceEEEecCC-CcEEE-EEEeCC-----CCceEe
Q 011749 380 RGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNFLIPVDSN-GTFCF-AFAPTS-----SSLSII 452 (478)
Q Consensus 380 ~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~~~~l~~~~yl~~~~~~-~~~Cl-~~~~~~-----~~~~Il 452 (478)
+... ..+.+.+ +|+... .+|+|+|+| +|++++|++++|+++.... +..|+ +|.+.+ .+.|||
T Consensus 148 ~~~~----~~g~~~~-~C~~~~-----~~p~i~f~f-~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~il 216 (241)
T 1lya_B 148 AVPL----IQGEYMI-PCEKVS-----TLPAITLKL-GGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWIL 216 (241)
T ss_dssp CEEE----ETTEEEE-EGGGGG-----GSCCEEEEE-TTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEE
T ss_pred Ceec----cCCcEEE-ECCCCc-----cCCeEEEEE-CCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEe
Confidence 5431 1333444 598754 689999999 8999999999999987632 46898 687652 467999
Q ss_pred cHhhhcceEEEEeCCCCEEEEeeCC
Q 011749 453 GNVQQQGTRVSFNLRNSLVGFTPNK 477 (478)
Q Consensus 453 G~~fl~~~yvvfD~~~~rIGFa~~~ 477 (478)
|+.|||++|+|||++++|||||+++
T Consensus 217 G~~fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 217 GDVFIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp CHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred chHHhcceEEEEECCCCEEEEEEcC
Confidence 9999999999999999999999875
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.80 E-value=8.4e-20 Score=150.86 Aligned_cols=82 Identities=28% Similarity=0.620 Sum_probs=70.4
Q ss_pred eeccccCcCCCCeeEEEEEEecCCCcEEEEEEeCCCCcceEeCCCCC----CccCCCCCCCCCCCCCCccccCCCCcccC
Q 011749 136 QGPIVSGSSQGSGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCAPCA----DCYQQADPIFEPTSSSSYSPLTCNTKQCQ 211 (478)
Q Consensus 136 ~~p~~~~~~~~~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~C~----~C~~~~~~~fdps~SsT~~~~~C~s~~C~ 211 (478)
..|+.+ ..+.+|+++|.||||+|++.|+|||||+++||+|.+|. .|. .++.|||++|+||+...
T Consensus 4 ~~~l~n---~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~--~~~~y~p~~SsT~~~~~------- 71 (97)
T 1lya_A 4 PEVLKN---YMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACW--IHHKYNSDKSSTYVKNG------- 71 (97)
T ss_dssp EEEEEE---ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHH--TSCCBCGGGCTTCEEEE-------
T ss_pred eEeeEE---CCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccC--CCCCCCchhCCCceeCC-------
Confidence 356654 24689999999999999999999999999999999997 686 46899999999999875
Q ss_pred CCCCCCcCCCCceeEEEcCCCcEE------EEEEC
Q 011749 212 SLDESECRNNTCLYEVSYGDGSYT------TVTLG 240 (478)
Q Consensus 212 ~~~~~~C~~~~c~y~~~Ygdgs~~------tltlg 240 (478)
|.|.+.|+||+.. +|+|+
T Consensus 72 -----------~~~~i~Yg~Gs~~G~~~~Dtv~i~ 95 (97)
T 1lya_A 72 -----------TSFDIHYGSGSLSGYLSQDTVSVP 95 (97)
T ss_dssp -----------EEEEEECSSCEEEEEEEEEEEEES
T ss_pred -----------CcEEEEECCcEEEEEEEEEEEEEC
Confidence 8999999999855 55554
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.65 E-value=2.2e-16 Score=127.64 Aligned_cols=79 Identities=29% Similarity=0.534 Sum_probs=65.8
Q ss_pred cccccccccCCCCccccceEEEEeCCCcEEEeCCCceEEEecCC-CcEEE-EEEeC----CCCceEecHhhhcceEEEEe
Q 011749 392 ALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNFLIPVDSN-GTFCF-AFAPT----SSSLSIIGNVQQQGTRVSFN 465 (478)
Q Consensus 392 ~~~~~C~~~~~~~~~~~P~l~f~f~gg~~~~l~~~~yl~~~~~~-~~~Cl-~~~~~----~~~~~IlG~~fl~~~yvvfD 465 (478)
+.+ +|...+ .+|+|+|+| +|++++|++++|+++.... +..|+ +|++. .++.||||++|||++|+|||
T Consensus 3 y~v-~C~~~~-----~~P~i~f~~-gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD 75 (87)
T 1b5f_B 3 LQV-DCNTLS-----SMPNVSFTI-GGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFD 75 (87)
T ss_dssp CEE-CGGGGG-----GCCCEEEEE-TTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEE
T ss_pred EEE-ECCCCC-----cCCcEEEEE-CCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEE
Confidence 344 487644 689999999 8999999999999986532 36898 68764 24579999999999999999
Q ss_pred CCCCEEEEeeCC
Q 011749 466 LRNSLVGFTPNK 477 (478)
Q Consensus 466 ~~~~rIGFa~~~ 477 (478)
++++|||||+++
T Consensus 76 ~~~~riGfA~~~ 87 (87)
T 1b5f_B 76 YGNLLVGFAEAA 87 (87)
T ss_dssp TTTTEEEEEEEC
T ss_pred CCCCEEEEEEcC
Confidence 999999999874
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=91.23 E-value=0.48 Score=40.78 Aligned_cols=108 Identities=15% Similarity=0.218 Sum_probs=60.6
Q ss_pred eeEEEEEeEEEEcCeEeecCCcccccccCCCCcEEEccCcceeeecHHHHHHHHHHHHhhcc-CCC-CCCCccccccccc
Q 011749 322 TFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTR-ALS-PTDGVALFDTCYD 399 (478)
Q Consensus 322 ~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~-~~~-~~~~~~~~~~C~~ 399 (478)
..++|+ +.|+|+.+. ++||||.+.+.++.+..+.+- +..... ... ...+.... .+.
T Consensus 25 ~~~~v~---v~InG~~~~---------------~LvDTGAs~s~is~~~a~~lg--l~~~~~~~~~~~a~g~g~~-~~~- 82 (148)
T 2i1a_A 25 PMLYIN---IEINNYPVK---------------AFVDTGAQTTIMSTRLAKKTG--LSRMIDKRFIGEARGVGTG-KII- 82 (148)
T ss_dssp CCCEEE---EEETTEEEE---------------EEECTTCSSCEEEHHHHHHHT--GGGGCBCCCC------------C-
T ss_pred ceEEEE---EEECCEEEE---------------EEEECCCCccccCHHHHHHcC--CCccCCcceEEEEecCCCc-ccc-
Confidence 345555 678888654 599999999999988876652 111000 000 00111000 000
Q ss_pred cCCCCccccceEEEEeCCCcEEEeCCCceEEEecCCCcEEEEEEeCCCCceEecHhhhcceEEEEeCCCCEEEEe
Q 011749 400 FSSRSSVEVPTVSFHFPEGKVLPLPAKNFLIPVDSNGTFCFAFAPTSSSLSIIGNVQQQGTRVSFNLRNSLVGFT 474 (478)
Q Consensus 400 ~~~~~~~~~P~l~f~f~gg~~~~l~~~~yl~~~~~~~~~Cl~~~~~~~~~~IlG~~fl~~~yvvfD~~~~rIGFa 474 (478)
.......+.+ |+..+.+ ++ .+.+ .+-..|||..||+++-+..|+.+++|-|.
T Consensus 83 ------~~~~~~~i~i-g~~~~~~---~~------------~vl~-~~~d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 83 ------GRIHQAQVKI-ETQYIPC---SF------------TVLD-TDIDVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp ------EEEEEEEEEE-TTEEEEE---EE------------EEEC-SSCSEEECHHHHHHTTCEEETTTTEEEET
T ss_pred ------cEEEEEEEEE-CCEEece---eE------------EEec-CCCCeEecHHHHhhCCEEEECCCCEEEEc
Confidence 0123345666 5544321 11 1122 12348999999999999999999999875
No 39
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=90.43 E-value=0.5 Score=41.06 Aligned_cols=108 Identities=19% Similarity=0.270 Sum_probs=62.5
Q ss_pred eEEEEEeEEEEcCeEeecCCcccccccCCCCcEEEccCcceeeecHHHHHHHHHHHHhhccC-CC-CCCCcccccccccc
Q 011749 323 FYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRA-LS-PTDGVALFDTCYDF 400 (478)
Q Consensus 323 ~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~-~~-~~~~~~~~~~C~~~ 400 (478)
.++|+ +.|+|+.+. +++|||.+.+.++.+..+.+- +...... .. ...+.... .+.
T Consensus 24 ~l~v~---~~Ing~~v~---------------~LVDTGAs~s~Is~~~A~rlG--L~~~~~~~~~~~a~g~G~~-~~~-- 80 (148)
T 3s8i_A 24 MLYIN---CKVNGHPLK---------------AFVDSGAQMTIMSQACAERCN--IMRLVDRRWAGVAKGVGTQ-RII-- 80 (148)
T ss_dssp CCEEE---EEETTEEEE---------------EEECTTCSSCEEEHHHHHHTT--CGGGEEGGGCEECCC---C-EEE--
T ss_pred EEEEE---EEECCEEEE---------------EEEeCCCCcEeeCHHHHHHcC--CccccCcceeEEEEcCCcc-EEE--
Confidence 45555 457888664 599999999999999888762 1100000 00 00000000 010
Q ss_pred CCCCccccceEEEEeCCCcEEEeCCCceEEEecCCCcEEE-EEEeCCCCceEecHhhhcceEEEEeCCCCEEEEee
Q 011749 401 SSRSSVEVPTVSFHFPEGKVLPLPAKNFLIPVDSNGTFCF-AFAPTSSSLSIIGNVQQQGTRVSFNLRNSLVGFTP 475 (478)
Q Consensus 401 ~~~~~~~~P~l~f~f~gg~~~~l~~~~yl~~~~~~~~~Cl-~~~~~~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~ 475 (478)
-..+...+.+ |+..+. |- .+.+...-..|||.-+|+.+-.+.|++++++-|..
T Consensus 81 -----g~v~~~~I~I-g~~~~~----------------~~~~Vle~~~~d~LLGmD~L~~~~~~ID~~~~~L~l~~ 134 (148)
T 3s8i_A 81 -----GRVHLAQIQI-EGDFLQ----------------CSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGT 134 (148)
T ss_dssp -----EEEEEEEEEE-TTEEEE----------------EEEEEETTCSSSEEECHHHHHHTTCEEETTTTEEECTT
T ss_pred -----EEEEEEEEEE-CCEEEE----------------EEEEEeCCCCcCeeccHHHHHhCCEEEEcCCCEEEEcc
Confidence 0234456666 454321 21 22222223489999999999999999999998753
No 40
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=83.82 E-value=1 Score=36.59 Aligned_cols=26 Identities=31% Similarity=0.354 Sum_probs=23.9
Q ss_pred EEEEEEecCCCcEEEEEEeCCCCcceEe
Q 011749 150 YFSRVGIGKPPSQVYMVLDTGSDVNWLQ 177 (478)
Q Consensus 150 Y~v~i~iGTP~q~~~lilDTGS~~~Wv~ 177 (478)
-++.|.|| .|.+.+++|||.|++-+.
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 37889999 899999999999999997
No 41
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=82.51 E-value=1.5 Score=35.38 Aligned_cols=27 Identities=26% Similarity=0.338 Sum_probs=24.3
Q ss_pred EEEEEecCCCcEEEEEEeCCCCcceEeCC
Q 011749 151 FSRVGIGKPPSQVYMVLDTGSDVNWLQCA 179 (478)
Q Consensus 151 ~v~i~iGTP~q~~~lilDTGS~~~Wv~~~ 179 (478)
++.|.|| .|.+.+++|||.|++-+.-.
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~ 36 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEM 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCC
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEecc
Confidence 6789999 89999999999999999754
No 42
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=78.70 E-value=2.5 Score=33.98 Aligned_cols=27 Identities=26% Similarity=0.240 Sum_probs=24.2
Q ss_pred EEEEEecCCCcEEEEEEeCCCCcceEeCC
Q 011749 151 FSRVGIGKPPSQVYMVLDTGSDVNWLQCA 179 (478)
Q Consensus 151 ~v~i~iGTP~q~~~lilDTGS~~~Wv~~~ 179 (478)
++.|.|| .|.+.+++|||.|++-+.-.
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCc
Confidence 6789999 99999999999999999644
No 43
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=77.48 E-value=2 Score=36.69 Aligned_cols=30 Identities=17% Similarity=0.248 Sum_probs=26.9
Q ss_pred CeeEEEEEEecCCCcEEEEEEeCCCCcceEeC
Q 011749 147 SGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQC 178 (478)
Q Consensus 147 ~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~ 178 (478)
.+.+++++.|+ ++++.+++|||++.+-+.-
T Consensus 24 ~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 24 VPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred cceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 57799999999 8999999999999998864
No 44
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=74.27 E-value=2.9 Score=34.42 Aligned_cols=31 Identities=23% Similarity=0.382 Sum_probs=26.1
Q ss_pred EEEEEec---CCCcEEEEEEeCCCCcceEeCCCC
Q 011749 151 FSRVGIG---KPPSQVYMVLDTGSDVNWLQCAPC 181 (478)
Q Consensus 151 ~v~i~iG---TP~q~~~lilDTGS~~~Wv~~~~C 181 (478)
.+.|.|| +|+|.+..++|||-|++-+.-..+
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 5667776 789999999999999999986543
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=74.15 E-value=2.9 Score=34.66 Aligned_cols=26 Identities=23% Similarity=0.327 Sum_probs=22.9
Q ss_pred EEEEEEecCCCcEEEEEEeCCCCcceEeC
Q 011749 150 YFSRVGIGKPPSQVYMVLDTGSDVNWLQC 178 (478)
Q Consensus 150 Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~ 178 (478)
=++ |.|| .|.+.+++|||.|++-+.-
T Consensus 15 P~v-ikI~--Gq~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 15 EIL-IFVN--GYPIKFLLDTGADITVLNR 40 (116)
T ss_dssp EEE-EEET--TEEEEEEECTTCSSCEEEG
T ss_pred CEE-EEEC--CEEEEEEecCCCCcEEEcc
Confidence 355 9999 8999999999999998874
No 46
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=66.69 E-value=5.8 Score=32.63 Aligned_cols=28 Identities=14% Similarity=0.176 Sum_probs=24.8
Q ss_pred EEEEEecCCCcEEEEEEeCCCCcceEeCCC
Q 011749 151 FSRVGIGKPPSQVYMVLDTGSDVNWLQCAP 180 (478)
Q Consensus 151 ~v~i~iGTP~q~~~lilDTGS~~~Wv~~~~ 180 (478)
.+.|.|| .|.+..++|||-|++-+.-..
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~~ 38 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLED 38 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGGG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEeccc
Confidence 6789999 899999999999999997653
No 47
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=65.36 E-value=5.4 Score=34.38 Aligned_cols=31 Identities=10% Similarity=0.205 Sum_probs=27.2
Q ss_pred CeeEEEEEEecCCCcEEEEEEeCCCCcceEeCC
Q 011749 147 SGEYFSRVGIGKPPSQVYMVLDTGSDVNWLQCA 179 (478)
Q Consensus 147 ~g~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~ 179 (478)
..-|++++.|+ .+++.+++|||++.+.+.-+
T Consensus 22 ~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 22 VTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred cCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 35689999998 89999999999999998653
No 48
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=57.68 E-value=13 Score=29.30 Aligned_cols=40 Identities=23% Similarity=0.394 Sum_probs=25.6
Q ss_pred eecccCCCCCeeEEEEEeEEEEcCeEeecCCcccccccCCCCcEEEccCcceeeecHH
Q 011749 312 APLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTE 369 (478)
Q Consensus 312 tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 369 (478)
.||.... ...|+++ |.||. |+..| .++||||+..+++|..
T Consensus 5 ~~l~n~~--~~~Y~~~---i~iGT-----P~Q~~--------~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 5 EVLKNYM--DAQYYGE---IGIGT-----PPQCF--------TVVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEEET--TTEEEEE---EEETT-----TTEEE--------EEEEETTCCCEEEEBT
T ss_pred EeeEECC--CCeEEEE---EEECC-----CCeEE--------EEEEeCCCCceEEeEc
Confidence 5554321 3567765 77883 22222 2699999999999864
No 49
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=54.84 E-value=11 Score=31.79 Aligned_cols=29 Identities=24% Similarity=0.280 Sum_probs=25.1
Q ss_pred eEEEEEEecCCCcEEEEEEeCCCCcceEeCC
Q 011749 149 EYFSRVGIGKPPSQVYMVLDTGSDVNWLQCA 179 (478)
Q Consensus 149 ~Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~ 179 (478)
.-++.+.|+ .|.+.+++|||.+.+-+.-.
T Consensus 22 RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 22 EPRITLKVG--GQPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SSEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CCEEEEEEC--CEEEEEEEeCCCCeEEEccc
Confidence 347889999 89999999999999998654
No 50
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=50.87 E-value=12 Score=31.32 Aligned_cols=23 Identities=17% Similarity=0.303 Sum_probs=19.6
Q ss_pred ecCCCcEEEEEEeCCCCcceEeCCC
Q 011749 156 IGKPPSQVYMVLDTGSDVNWLQCAP 180 (478)
Q Consensus 156 iGTP~q~~~lilDTGS~~~Wv~~~~ 180 (478)
|| .|.+.+++|||-|++-+.-..
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~ 49 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEED 49 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTT
T ss_pred CC--CEEEEEEecCCCCcEEEeccc
Confidence 66 788899999999999997553
No 51
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=50.27 E-value=13 Score=33.69 Aligned_cols=27 Identities=26% Similarity=0.300 Sum_probs=24.2
Q ss_pred EEEEEEecCCCcEEEEEEeCCCCcceEeC
Q 011749 150 YFSRVGIGKPPSQVYMVLDTGSDVNWLQC 178 (478)
Q Consensus 150 Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~ 178 (478)
-.+.|.|| .|.+.+++|||.|++-+.-
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEec
Confidence 47889999 8999999999999999863
No 52
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=30.95 E-value=41 Score=30.44 Aligned_cols=28 Identities=25% Similarity=0.275 Sum_probs=24.4
Q ss_pred EEEEEEecCCCcEEEEEEeCCCCcceEeCC
Q 011749 150 YFSRVGIGKPPSQVYMVLDTGSDVNWLQCA 179 (478)
Q Consensus 150 Y~v~i~iGTP~q~~~lilDTGS~~~Wv~~~ 179 (478)
=.+++.|| .|.+.+++|||.|++-+.-.
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~~ 140 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEEL 140 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeecc
Confidence 37889999 89999999999999998543
No 53
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=28.62 E-value=49 Score=30.21 Aligned_cols=40 Identities=28% Similarity=0.527 Sum_probs=25.4
Q ss_pred eecccCCCCCeeEEEEEeEEEEcCeEeecCCcccccccCCCCcEEEccCcceeeecHH
Q 011749 312 APLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTE 369 (478)
Q Consensus 312 tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 369 (478)
+||.... ...|+++ |+||. |+..| .++||||++.+++|..
T Consensus 5 ~~l~n~~--~~~Y~~~---i~iGt-----P~q~~--------~v~~DTGSs~lWv~~~ 44 (239)
T 1b5f_A 5 VALTNDR--DTSYFGE---IGIGT-----PPQKF--------TVIFDTGSSVLWVPSS 44 (239)
T ss_dssp EEEEEET--TTEEEEE---EEETT-----TTEEE--------EEEEETTCCCEEEEBT
T ss_pred eeeeecC--CCEEEEE---EEECC-----CCeEE--------EEEEeCCCcceEEEcC
Confidence 4554422 3467665 67883 22222 2699999999999854
No 54
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=28.58 E-value=55 Score=31.33 Aligned_cols=31 Identities=26% Similarity=0.423 Sum_probs=23.3
Q ss_pred CeeEEEEEeEEEEcCeEeecCCcccccccCCCCcEEEccCcceeeecHH
Q 011749 321 DTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTE 369 (478)
Q Consensus 321 ~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 369 (478)
...|+++ |+||.+++. ++||||++.+++|..
T Consensus 14 ~~~Y~~~---i~iG~Q~~~---------------v~~DTGSs~lWv~~~ 44 (323)
T 1bxo_A 14 DEEYITP---VTIGGTTLN---------------LNFDTGSADLWVFST 44 (323)
T ss_dssp GSCEEEE---EEETTEEEE---------------EEEETTCCCEEECBT
T ss_pred CCEEEEE---EEECCEEEE---------------EEEeCCCcceEEecC
Confidence 4567765 778855543 599999999999865
No 55
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=28.11 E-value=57 Score=31.23 Aligned_cols=32 Identities=28% Similarity=0.386 Sum_probs=23.6
Q ss_pred CeeEEEEEeEEEEcCeEeecCCcccccccCCCCcEEEccCcceeeecHHH
Q 011749 321 DTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTET 370 (478)
Q Consensus 321 ~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~ 370 (478)
...|+++ |+||.+.+. ++||||++.+++|..-
T Consensus 14 ~~~Y~~~---i~iG~q~~~---------------v~~DTGSs~lWv~~~~ 45 (323)
T 1izd_A 14 DEEYITQ---VTVGDDTLG---------------LDFDTGSADLWVFSSQ 45 (323)
T ss_dssp GCCEEEE---EEETTEEEE---------------EEEETTCCCEEECBTT
T ss_pred CCEEEEE---EEECCEEEE---------------EEEcCCCcceEEecCC
Confidence 4567665 778855443 5999999999998753
No 56
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=26.46 E-value=57 Score=32.33 Aligned_cols=43 Identities=12% Similarity=0.152 Sum_probs=27.6
Q ss_pred eeeecccCCCCCeeEEEEEeEEEEcCeEeecCCcccccccCCCCcEEEccCcceeeecHH
Q 011749 310 VTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTE 369 (478)
Q Consensus 310 ~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 369 (478)
...||..+.. ...|+++ |.||. |+..| .++||||++.+++|-.
T Consensus 10 ~~~pl~~~~~-~~~Y~~~---i~iGT-----P~Q~~--------~v~~DTGSs~lWv~~~ 52 (403)
T 3aup_A 10 VVLPVQNDGS-TGLHWAN---LQKRT-----PLMQV--------PVLVDLNGNHLWVNCE 52 (403)
T ss_dssp EEEEEEECTT-TCCEEEE---EEETT-----TTEEE--------EEEEETTCSSEEEECS
T ss_pred EEEeeecCCC-CceEEEE---EECCC-----CCcee--------EEEEECCCCceeECCC
Confidence 3467764422 4567765 67884 22222 3699999999999854
No 57
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=26.06 E-value=60 Score=31.06 Aligned_cols=32 Identities=25% Similarity=0.361 Sum_probs=23.7
Q ss_pred CeeEEEEEeEEEEcCeEeecCCcccccccCCCCcEEEccCcceeeecHHH
Q 011749 321 DTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTET 370 (478)
Q Consensus 321 ~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~ 370 (478)
...|+++ |+||.+++. ++||||++.+++|..-
T Consensus 13 ~~~Y~~~---i~iG~Q~~~---------------v~~DTGSs~lWv~~~~ 44 (325)
T 1ibq_A 13 DEEYLTP---VTVGKSTLH---------------LDFDTGSADLWVFSDE 44 (325)
T ss_dssp TSCEEEE---EEEBTEEEE---------------EEEETTCCCEEEECTT
T ss_pred CCEEEEE---EEECCEEEE---------------EEEeCCCccceEeeCC
Confidence 4567765 678855543 5999999999998653
No 58
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=25.16 E-value=60 Score=31.20 Aligned_cols=39 Identities=18% Similarity=0.357 Sum_probs=25.3
Q ss_pred eecccCCCCCeeEEEEEeEEEEcCeEeecCCcccccccCCCCcEEEccCcceeeecHH
Q 011749 312 APLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTE 369 (478)
Q Consensus 312 tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 369 (478)
+|+... ...|+++ |.||. |+..| .++||||++.+++|..
T Consensus 5 ~~l~~~---~~~Y~~~---i~iGt-----P~q~~--------~v~~DTGSs~~Wv~~~ 43 (334)
T 1j71_A 5 TTLINE---GPSYAAD---IVVGS-----NQQKQ--------TVVIDTGSSDLWVVDT 43 (334)
T ss_dssp EEEEEC---SSSEEEE---EEETT-----TTEEE--------EEEEETTCCCEEEEEE
T ss_pred EEEecC---CcEEEEE---EEEcC-----CCcEE--------EEEEcCCCCCEEEecC
Confidence 455543 4567765 77883 22222 2699999999999843
No 59
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=25.16 E-value=60 Score=31.17 Aligned_cols=40 Identities=20% Similarity=0.350 Sum_probs=26.0
Q ss_pred eeecccCCCCCeeEEEEEeEEEEcCeEeecCCcccccccCCCCcEEEccCcceeeecHH
Q 011749 311 TAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTE 369 (478)
Q Consensus 311 ~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 369 (478)
-+|+... ..+|+++ |+||. |+..+ .++||||++.+++|..
T Consensus 4 ~~~l~~~---~~~Y~~~---i~iGt-----P~Q~~--------~v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 4 SLSLINE---GPSYASK---VSVGS-----NKQQQ--------TVIIDTGSSDFWVVDS 43 (339)
T ss_dssp EEEEEEC---SSSEEEE---EEETT-----TTEEE--------EEEEETTCCCEEEEEE
T ss_pred eeEEEcC---CCEEEEE---EEEcC-----CCcEE--------EEEEeCCCCceEEecC
Confidence 3566543 3568766 67884 22222 2599999999999843
No 60
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=24.49 E-value=76 Score=30.26 Aligned_cols=42 Identities=21% Similarity=0.400 Sum_probs=26.8
Q ss_pred eeeecccCCCCCeeEEEEEeEEEEcCeEeecCCcccccccCCCCcEEEccCcceeeecHH
Q 011749 310 VTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTE 369 (478)
Q Consensus 310 ~~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 369 (478)
...||.... ...|+++ |+||. |+..+ .++||||++.+++|..
T Consensus 4 ~~~~l~n~~--~~~Y~~~---i~iGt-----P~q~~--------~v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 4 ASVPLTNYL--DSQYFGK---IYLGT-----PPQEF--------TVLFDTGSSDFWVPSI 45 (323)
T ss_dssp EEEEEEEET--TTEEEEE---EEETT-----TTEEE--------EEEEETTCCCEEEEBT
T ss_pred ceeeeEecc--CCEEEEE---EEECC-----CCeEE--------EEEEeCCccceEEcCC
Confidence 345665422 3567765 77884 22222 2699999999999864
No 61
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=23.88 E-value=71 Score=30.98 Aligned_cols=41 Identities=22% Similarity=0.304 Sum_probs=27.6
Q ss_pred CeeeecccCCCCCeeEEEEEeEEEEc--CeEeecCCcccccccCCCCcEEEccCcceeeecHH
Q 011749 309 AVTAPLLRNHELDTFYYLGLTGISVG--GDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTE 369 (478)
Q Consensus 309 ~~~tpl~~~~~~~~~y~v~l~gIsVg--g~~l~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 369 (478)
+...|+.... ...|+++ |+|| .+.+. ++||||++.+++|..
T Consensus 7 ~~~~~l~~~~--~~~Y~~~---i~iGtP~q~~~---------------v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 7 VDTPGLYDFD--LEEYAIP---VSIGTPGQDFY---------------LLFDTGSSDTWVPHK 49 (361)
T ss_dssp EEEEEEEETT--TTEEEEE---EEETTTTEEEE---------------EEEETTCCCCEEEBT
T ss_pred cceEEeecCC--CCEEEEE---EEECCCCcEEE---------------EEEcCCCCCeEECCC
Confidence 3446665422 3567665 7788 34432 599999999999864
No 62
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=23.74 E-value=83 Score=30.24 Aligned_cols=39 Identities=23% Similarity=0.406 Sum_probs=25.0
Q ss_pred eecccCCCCCeeEEEEEeEEEEcCeEeecCCcccccccCCCCcEEEccCcceeeecHH
Q 011749 312 APLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTE 369 (478)
Q Consensus 312 tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 369 (478)
+|+... ...|+++ |+||. |+..| .++||||++.+++|..
T Consensus 5 ~~l~~~---~~~Y~~~---i~iGt-----P~q~~--------~v~~DTGSs~~Wv~~~ 43 (342)
T 2qzx_A 5 VTLHNE---AITYTAD---ITVGS-----DNQKL--------NVIVDTGSSDLWIPDS 43 (342)
T ss_dssp EEEEEC---SSCEEEE---EEETT-----TTEEE--------EEEEETTCCCEEEEEE
T ss_pred EEEecC---CeEEEEE---EEECC-----CCcEE--------EEEEeCCCCCeEEecC
Confidence 455442 4567765 77883 22222 2699999999999843
No 63
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=23.36 E-value=69 Score=30.81 Aligned_cols=39 Identities=26% Similarity=0.494 Sum_probs=25.4
Q ss_pred eeecccCCCCCeeEEEEEeEEEEcCeEeecCCcccccccCCCCcEEEccCcceeeecH
Q 011749 311 TAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQT 368 (478)
Q Consensus 311 ~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~ 368 (478)
.+||... ...|.++ |+||. |+..+ .++||||++.++++.
T Consensus 4 ~~~l~n~---~~~Y~~~---i~iGT-----P~q~~--------~v~~DTGSs~lWv~~ 42 (340)
T 1wkr_A 4 SVPATNQ---LVDYVVN---VGVGS-----PATTY--------SLLVDTGSSNTWLGA 42 (340)
T ss_dssp EEEEEEC---SSCEEEE---EEETT-----TTEEE--------EEEEETTCCCCEECS
T ss_pred cEeeecc---CcEEEEE---EEECC-----CCcEE--------EEEEeCCChhheecC
Confidence 3566543 3467765 77883 22222 269999999999985
No 64
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=22.34 E-value=75 Score=30.36 Aligned_cols=31 Identities=23% Similarity=0.469 Sum_probs=22.7
Q ss_pred CeeEEEEEeEEEEc--CeEeecCCcccccccCCCCcEEEccCcceeeecHH
Q 011749 321 DTFYYLGLTGISVG--GDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTE 369 (478)
Q Consensus 321 ~~~y~v~l~gIsVg--g~~l~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 369 (478)
...|+++ |+|| .+.+. ++||||++.+++|..
T Consensus 14 ~~~Y~~~---i~iGTP~q~~~---------------v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 14 DIEYYGQ---VTIGTPGKKFN---------------LDFDTGSSDLWIAST 46 (325)
T ss_dssp TTEEEEE---EEETTTTEEEE---------------EEEETTCCCCEEEBT
T ss_pred CCEEEEE---EEECCCCeEEE---------------EEEcCCCCCEEEccC
Confidence 4567665 7788 44432 599999999999864
No 65
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=21.70 E-value=91 Score=29.68 Aligned_cols=40 Identities=28% Similarity=0.459 Sum_probs=25.7
Q ss_pred eecccCCCCCeeEEEEEeEEEEcCeEeecCCcccccccCCCCcEEEccCcceeeecHH
Q 011749 312 APLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTE 369 (478)
Q Consensus 312 tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 369 (478)
.||.... ...|+++ |+||. |+..+ .++||||++.+++|..
T Consensus 4 ~~l~n~~--~~~Y~~~---i~iGt-----P~q~~--------~v~~DTGSs~~Wv~~~ 43 (324)
T 1am5_A 4 EQMKNEA--DTEYYGV---ISIGT-----PPESF--------KVIFDTGSSNLWVSSS 43 (324)
T ss_dssp EEEEEET--TTEEEEE---EEETT-----TTEEE--------EEEEETTCCCEEECBT
T ss_pred eeeecCC--CCEEEEE---EEECC-----CCeEE--------EEEEeCCCcceEEecC
Confidence 4555322 3567665 67884 22222 3699999999999864
No 66
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=21.27 E-value=98 Score=29.52 Aligned_cols=41 Identities=24% Similarity=0.517 Sum_probs=25.8
Q ss_pred eeecccCCCCCeeEEEEEeEEEEcCeEeecCCcccccccCCCCcEEEccCcceeeecHH
Q 011749 311 TAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTE 369 (478)
Q Consensus 311 ~tpl~~~~~~~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 369 (478)
.+|+.... ...|+++ |+||. |+..| .++||||++.+++|..
T Consensus 4 ~~~l~~~~--~~~Y~~~---i~iGt-----P~q~~--------~v~~DTGSs~lWv~~~ 44 (329)
T 1dpj_A 4 DVPLTNYL--NAQYYTD---ITLGT-----PPQNF--------KVILDTGSSNLWVPSN 44 (329)
T ss_dssp EEECEEET--TTEEEEE---EEETT-----TTEEE--------EEEEETTCCCEEEEBT
T ss_pred ceeeeecC--CCEEEEE---EEECC-----CCcEE--------EEEEeCCCcCeEEecC
Confidence 34555322 3467665 77883 22222 2699999999999864
No 67
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=21.21 E-value=79 Score=30.27 Aligned_cols=33 Identities=24% Similarity=0.432 Sum_probs=22.6
Q ss_pred CeeEEEEEeEEEEcCeEeecCCcccccccCCCCcEEEccCcceeeecHH
Q 011749 321 DTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTE 369 (478)
Q Consensus 321 ~~~y~v~l~gIsVgg~~l~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 369 (478)
..+|+++ |+||. |+..+ .++||||++.+++|..
T Consensus 11 ~~~Y~~~---i~iGt-----P~q~~--------~v~~DTGSs~~Wv~~~ 43 (342)
T 3pvk_A 11 QVTYAAD---ITVGS-----NNQKL--------NVIVDTGSSDLWVPDV 43 (342)
T ss_dssp SSSEEEE---EEETT-----TTEEE--------EEEEETTCCCEEEEEE
T ss_pred CcEEEEE---EEEcC-----CCcEE--------EEEEECCCcceEEEcC
Confidence 4567766 67884 22222 2599999999999853
No 68
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=20.53 E-value=1.1e+02 Score=29.24 Aligned_cols=31 Identities=26% Similarity=0.516 Sum_probs=22.7
Q ss_pred CeeEEEEEeEEEEc--CeEeecCCcccccccCCCCcEEEccCcceeeecHH
Q 011749 321 DTFYYLGLTGISVG--GDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTE 369 (478)
Q Consensus 321 ~~~y~v~l~gIsVg--g~~l~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 369 (478)
...|+++ |+|| .+++. ++||||++.+++|..
T Consensus 14 ~~~Y~~~---i~iGTP~Q~~~---------------v~~DTGSs~lWv~~~ 46 (329)
T 3c9x_A 14 DSEYITS---VSIGTPAQVLP---------------LDFDTGSSDLWVFSS 46 (329)
T ss_dssp CCCEEEE---EEETTTTEEEE---------------EEEETTCCCEEECBT
T ss_pred CCEEEEE---EEECCCCeEEE---------------EEEcCCCCCeEEecC
Confidence 4567654 7888 34432 599999999999865
Done!