Your job contains 1 sequence.
>011752
MRQESKDPAIRLFGKKIAFPSDGEVPVIFSEELPSPAAKEECSIEAEEEKAEEDSSAVKA
AETTQQDDTTPPNIDESKIPESPEANVNPKTPSIDDETAKSKAAKSEKSQNDASNSNSQE
KTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRR
KNKNCASQYRHITISEALQAARIDAPNGISHPSVKSNGRVLSFGLDAPICDSMASVLNLA
EKKVLNGTRNGFHGFQEQEIPVPCRGGENGDDCSSGSSITVSNPMEEVGRNGMQEPLMRS
INGFPSPIPCLPGVPWPYPWNASVPPPAFCPSGFPMSFYPAAFWNCGIPSTWNMPWISPQ
SSPNQKSPSSGPNSPTLGKHSRDADMIKSENMDKEELSKEKNRCVLVPKTLRIDDPNEAA
KSSIWATLGIKNESLAGGRLFKGLQSKSDEKSHMAETSPVLRANPAALSRSLNFHEST
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011752
(478 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2079152 - symbol:CDF3 "cycling DOF factor 3" s... 968 1.7e-103 2
TAIR|locus:2154079 - symbol:CDF1 "AT5G62430" species:3702... 386 1.8e-75 4
TAIR|locus:2007151 - symbol:AT1G69570 species:3702 "Arabi... 326 6.3e-54 4
TAIR|locus:2164860 - symbol:CDF2 "cycling DOF factor 2" s... 474 4.4e-45 1
TAIR|locus:2030006 - symbol:AT1G29160 species:3702 "Arabi... 319 6.1e-31 2
TAIR|locus:2055506 - symbol:AT2G34140 species:3702 "Arabi... 310 2.0e-30 2
TAIR|locus:2032153 - symbol:AT1G28310 species:3702 "Arabi... 283 3.8e-27 2
TAIR|locus:2134981 - symbol:AT4G24060 species:3702 "Arabi... 260 8.3e-26 2
TAIR|locus:2040746 - symbol:DOF2.4 "DNA binding with one ... 253 3.2e-24 2
TAIR|locus:2079492 - symbol:DAG1 "dof affecting germinati... 259 3.2e-24 2
TAIR|locus:2053175 - symbol:AT2G28810 species:3702 "Arabi... 274 1.0e-23 1
TAIR|locus:2019499 - symbol:AT1G64620 species:3702 "Arabi... 269 4.0e-23 1
TAIR|locus:2074850 - symbol:OBP1 "OBF binding protein 1" ... 268 5.2e-23 1
TAIR|locus:2017567 - symbol:DOF1 "DOF zinc finger protein... 249 6.4e-23 2
TAIR|locus:2158078 - symbol:AT5G66940 species:3702 "Arabi... 265 1.2e-22 1
TAIR|locus:2144030 - symbol:TMO6 "TARGET OF MONOPTEROS 6"... 258 7.4e-22 1
TAIR|locus:2159275 - symbol:OBP4 "OBF binding protein 4" ... 258 7.4e-22 1
TAIR|locus:2039959 - symbol:DAG2 "DOF AFFECTING GERMINATI... 265 1.0e-21 1
TAIR|locus:2094746 - symbol:DOF2 "DOF zinc finger protein... 256 1.2e-21 1
TAIR|locus:2026595 - symbol:OBP2 species:3702 "Arabidopsi... 254 2.1e-21 1
TAIR|locus:2056588 - symbol:AT2G28510 species:3702 "Arabi... 252 3.5e-21 1
TAIR|locus:2121041 - symbol:DOF4.7 "DNA binding with one ... 252 3.5e-21 1
TAIR|locus:2155755 - symbol:AT5G65590 species:3702 "Arabi... 250 6.0e-21 1
TAIR|locus:505006172 - symbol:AT1G47655 species:3702 "Ara... 248 1.0e-20 1
TAIR|locus:2134658 - symbol:AT4G00940 species:3702 "Arabi... 248 1.0e-20 1
TAIR|locus:2085697 - symbol:DOF6 "DOF transcription facto... 245 2.2e-20 1
TAIR|locus:2170753 - symbol:HCA2 "HIGH CAMBIAL ACTIVITY2"... 252 1.1e-19 1
TAIR|locus:2079954 - symbol:AT3G52440 species:3702 "Arabi... 238 1.3e-19 1
TAIR|locus:2133079 - symbol:DOF4.4 "DNA-binding with One ... 237 1.7e-19 1
TAIR|locus:2181773 - symbol:AT5G02460 species:3702 "Arabi... 250 3.6e-19 1
TAIR|locus:2027027 - symbol:AT1G21340 species:3702 "Arabi... 230 1.0e-18 1
TAIR|locus:2133064 - symbol:DOF4.3 "AT4G21040" species:37... 211 1.3e-16 1
TAIR|locus:2127353 - symbol:DOF4.5 "DNA-binding with One ... 208 2.8e-16 1
TAIR|locus:2133149 - symbol:ATDOF4.2 "AT4G21030" species:... 153 2.9e-10 1
>TAIR|locus:2079152 [details] [associations]
symbol:CDF3 "cycling DOF factor 3" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0048510 "regulation of timing
of transition from vegetative to reproductive phase" evidence=IMP]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 EMBL:AL132955 HOGENOM:HOG000239772
EMBL:AF079503 EMBL:AY065152 EMBL:AY128757 EMBL:AY084628
IPI:IPI00547330 PIR:T45710 RefSeq:NP_190334.1 UniGene:At.519
IntAct:Q8LFV3 STRING:Q8LFV3 EnsemblPlants:AT3G47500.1 GeneID:823904
KEGG:ath:AT3G47500 GeneFarm:4398 TAIR:At3g47500 eggNOG:NOG295870
InParanoid:Q8LFV3 OMA:KDNETER PhylomeDB:Q8LFV3
ProtClustDB:CLSN2915701 Genevestigator:Q8LFV3 GermOnline:AT3G47500
Uniprot:Q8LFV3
Length = 448
Score = 968 (345.8 bits), Expect = 1.7e-103, Sum P(2) = 1.7e-103
Identities = 216/424 (50%), Positives = 261/424 (61%)
Query: 67 DDTTPPNIDESKIPESPEANVNPKTPSID-DETXXXXXXXXXXXQNDASNSNSQEKTLKK 125
+ TP D++ + + N K ++D +E D + KTLKK
Sbjct: 46 EKVTPELSDKNNNNCNDNSFNNSKPETLDKEEATSTDQIESSDTPEDNQQTTPDGKTLKK 105
Query: 126 PDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNC 185
P KILPCPRC SM+TKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNK+
Sbjct: 106 PTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKSS 165
Query: 186 ASQYRHITISEALQAARIDAPNGISHPSVKSNGRVLSFGLDAP---ICDSMASVLNLAE- 241
+S YRHITISEAL+AAR+D P +++N RVLSFGL+A + M V+ L E
Sbjct: 166 SSHYRHITISEALEAARLD-------PGLQANTRVLSFGLEAQQQHVAAPMTPVMKLQED 218
Query: 242 KKVLNGTRNGFHGFQEQEIPVPCRGGENGDDCSSGSSITVSNPM---EEVGRNG--MQEP 296
+KV NG RN FHG +Q + ENGDDCSSGSS+T SN E ++G ++
Sbjct: 219 QKVSNGARNRFHGLADQRLVARV---ENGDDCSSGSSVTTSNNHSVDESRAQSGSVVEAQ 275
Query: 297 LMRSINGFPSPIPCLPGVPWPYPWNASVPPPAFCPS-GFPMSFYPAAFWNCGIPSTWNMP 355
+ + N + C+PGVPWPY WN ++PPP F P G+PM FYP +W IP +P
Sbjct: 276 MNNNNNNNMNGYACIPGVPWPYTWNPAMPPPGFYPPPGYPMPFYP--YWT--IPM---LP 328
Query: 356 WIXXXXXXXXXXXXXXXXXXTLGKHSRDADMIKSENMDKEELSKEKNRCVLVPKTLRIDD 415
TLGKH RD K +N E K+K CVLVPKTLRIDD
Sbjct: 329 --PHQSSSPISQKCSNTNSPTLGKHPRDEGSSKKDN---ETERKQKAGCVLVPKTLRIDD 383
Query: 416 PNEAAKSSIWATLGIKNESL--AGGRLFKGLQSKSDEKSH-MAETSPVLRANPAALSRSL 472
PNEAAKSSIW TLGIKNE++ AGG +FKG K+ ++ AE SPVL ANPAALSRS
Sbjct: 384 PNEAAKSSIWTTLGIKNEAMCKAGG-MFKGFDHKTKMYNNDKAENSPVLSANPAALSRSH 442
Query: 473 NFHE 476
NFHE
Sbjct: 443 NFHE 446
Score = 77 (32.2 bits), Expect = 1.7e-103, Sum P(2) = 1.7e-103
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 1 MRQESKDPAIRLFGKKIAFPSDGEVPVIFSEE 32
M E++DPAI+LFG KI FPS E V ++
Sbjct: 1 MMMETRDPAIKLFGMKIPFPSVFESAVTVEDD 32
>TAIR|locus:2154079 [details] [associations]
symbol:CDF1 "AT5G62430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0048510 "regulation of timing of transition from
vegetative to reproductive phase" evidence=IMP] [GO:0009658
"chloroplast organization" evidence=IMP] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0009658 GO:GO:0048510 EMBL:AB015469
EMBL:AB231333 EMBL:AF446362 EMBL:AY143830 IPI:IPI00525269
IPI:IPI00529068 RefSeq:NP_201049.3 UniGene:At.9300 IntAct:Q8W1E3
STRING:Q8W1E3 EnsemblPlants:AT5G62430.1 GeneID:836364
KEGG:ath:AT5G62430 GeneFarm:4477 TAIR:At5g62430 eggNOG:NOG237530
HOGENOM:HOG000239772 InParanoid:Q8W1E3 KO:K16222 OMA:ARIENND
PhylomeDB:Q8W1E3 ProtClustDB:CLSN2920562 Genevestigator:Q8W1E3
GermOnline:AT5G62430 Uniprot:Q8W1E3
Length = 298
Score = 386 (140.9 bits), Expect = 1.8e-75, Sum P(4) = 1.8e-75
Identities = 68/90 (75%), Positives = 77/90 (85%)
Query: 110 QNDASNSNSQ-EKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGG 168
QN S+ +KTLKKP KILPCPRCNSM+TKFCYYNNYN+NQPRHFCKACQRYWT+GG
Sbjct: 33 QNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTSGG 92
Query: 169 TMRNVPVGAGRRKNKNCA--SQYRHITISE 196
TMR+VP+GAGRRKNKN + S Y H+TISE
Sbjct: 93 TMRSVPIGAGRRKNKNNSPTSHYHHVTISE 122
Score = 262 (97.3 bits), Expect = 1.8e-75, Sum P(4) = 1.8e-75
Identities = 70/147 (47%), Positives = 80/147 (54%)
Query: 336 MSFYPAAFWNCGIPSTWN---MPWIXXXXXXXXXXXXXXXXXXTLGKHSRDADMIKSENM 392
++ +P W P TWN P TLGKHSRD D E +
Sbjct: 167 LNCFPGVSW----PYTWNPAFYPVYPYWSMPVLSSPVSSSPTSTLGKHSRDED----ETV 218
Query: 393 DKEELSKEKNRCVLVPKTLRIDDPNEAAKSSIWATLGIKNESLAGGRLFKGLQSKSDEK- 451
+ K++N VLVPKTLRIDDPNEAAKSSIW TLGIKNE + F G SK + K
Sbjct: 219 KQ----KQRNGSVLVPKTLRIDDPNEAAKSSIWTTLGIKNEVM-----FNGFGSKKEVKL 269
Query: 452 --SHMAETSPVLRANPAALSRSLNFHE 476
ETS VL ANPAALSRS+NFHE
Sbjct: 270 SNKEETETSLVLCANPAALSRSINFHE 296
Score = 80 (33.2 bits), Expect = 1.8e-75, Sum P(4) = 1.8e-75
Identities = 28/86 (32%), Positives = 35/86 (40%)
Query: 246 NGTRNGFHGFQEQEIPVPCRGGENGDDCSSGSSITVSNPMEEVGRNGMQEPLMRSINGFP 305
N + +H E P GDD SS N + V R ++ RS N
Sbjct: 109 NSPTSHYHHVTISETNGPVLSFSLGDD-QKVSSNRFGN-QKLVAR--IENNDERSNNNTS 164
Query: 306 SPIPCLPGVPWPYPWNASVPPPAFCP 331
+ + C PGV WPY WN PAF P
Sbjct: 165 NGLNCFPGVSWPYTWN-----PAFYP 185
Score = 73 (30.8 bits), Expect = 1.8e-75, Sum P(4) = 1.8e-75
Identities = 15/22 (68%), Positives = 18/22 (81%)
Query: 4 ESKDPAIRLFGKKIAFPSDGEV 25
E+KDPAI+LFG KI FP+ EV
Sbjct: 3 ETKDPAIKLFGMKIPFPTVLEV 24
Score = 39 (18.8 bits), Expect = 6.4e-31, Sum P(3) = 6.4e-31
Identities = 28/116 (24%), Positives = 44/116 (37%)
Query: 157 CKACQRYWTAGGTMRNVPVGAGRRKNKNCASQY------RHITISEALQAARIDAPNG-I 209
C C T N V R K C + R + I + + ++P
Sbjct: 56 CPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNKNNSPTSHY 115
Query: 210 SHPSV-KSNGRVLSFGL--DAPICDS-------MASVLNLAEKKVLNGTRNGFHGF 255
H ++ ++NG VLSF L D + + +A + N E+ N T NG + F
Sbjct: 116 HHVTISETNGPVLSFSLGDDQKVSSNRFGNQKLVARIENNDERSN-NNTSNGLNCF 170
>TAIR|locus:2007151 [details] [associations]
symbol:AT1G69570 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IDA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC073178 HOGENOM:HOG000239772 EMBL:AF079504 EMBL:AC021046
EMBL:AK176346 EMBL:BT025623 IPI:IPI00525897 PIR:D96717 PIR:T51953
RefSeq:NP_177116.1 UniGene:At.10732 STRING:Q9SEZ3
EnsemblPlants:AT1G69570.1 GeneID:843293 KEGG:ath:AT1G69570
GeneFarm:4399 TAIR:At1g69570 eggNOG:NOG236464 OMA:RINDTNT
PhylomeDB:Q9SEZ3 ProtClustDB:CLSN2682558 Genevestigator:Q9SEZ3
GermOnline:AT1G69570 Uniprot:Q9SEZ3
Length = 399
Score = 326 (119.8 bits), Expect = 6.3e-54, Sum P(4) = 6.3e-54
Identities = 61/112 (54%), Positives = 76/112 (67%)
Query: 113 ASNSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRN 172
++ S + LKKPDK++PCPRC S +TKFCYYNNYN+NQPR+FC+ CQRYWTAGG+MRN
Sbjct: 115 STTSGEKSTALKKPDKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRN 174
Query: 173 VPVGAGRRKNKNCASQYRHITISEALQAARIDAPNGISHPSVKSNGRVLSFG 224
VPVG+GRRKNK S + LQ D N ++G +LSFG
Sbjct: 175 VPVGSGRRKNKGWPSSNHY------LQVTSEDCDNN-------NSGTILSFG 213
Score = 145 (56.1 bits), Expect = 6.3e-54, Sum P(4) = 6.3e-54
Identities = 41/104 (39%), Positives = 60/104 (57%)
Query: 377 LGKHSRDADMIKSENMDKEELSKEKNRCVLVPKTLRIDDPNEAAKSSIWATLGIKNESLA 436
LGK SRD ++ + R LV ++LR++ EA+KS++W+ L K E
Sbjct: 298 LGKRSRDQT---EGRINDTNTTITTTRARLVSESLRMNI--EASKSAVWSKLPTKPEKKT 352
Query: 437 GG-RLFKGLQSK--SDEKSHMAETSPVLRANPAALSRSLNFHES 477
G LF G +K S+ S ++ETS L+ANPAA+SR++NF ES
Sbjct: 353 QGFSLFNGFDTKGNSNRSSLVSETSHSLQANPAAMSRAMNFRES 396
Score = 85 (35.0 bits), Expect = 6.3e-54, Sum P(4) = 6.3e-54
Identities = 21/54 (38%), Positives = 25/54 (46%)
Query: 299 RSINGFPSPIPCLPG--VPWPYPWNASVPPPAFCPSGFPMSFYPAAF-WNCGIP 349
+S GF P LP PWPY W+ P+G SFYP F W C +P
Sbjct: 243 KSYQGFLPPQVMLPNNSSPWPYQWS---------PTGPNASFYPVPFYWGCTVP 287
Score = 38 (18.4 bits), Expect = 6.3e-54, Sum P(4) = 6.3e-54
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 4 ESKDPAIRLFGKKI 17
+S+D I+LFG+ I
Sbjct: 3 KSRDTEIKLFGRTI 16
>TAIR|locus:2164860 [details] [associations]
symbol:CDF2 "cycling DOF factor 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0048510 "regulation of timing
of transition from vegetative to reproductive phase" evidence=IMP]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000239772 EMBL:AB012243
EMBL:AY056804 EMBL:BT015791 IPI:IPI00544938 RefSeq:NP_568567.1
RefSeq:NP_851106.1 UniGene:At.26292 IntAct:Q93ZL5 STRING:Q93ZL5
PRIDE:Q93ZL5 EnsemblPlants:AT5G39660.1 EnsemblPlants:AT5G39660.2
GeneID:833962 KEGG:ath:AT5G39660 GeneFarm:4475 TAIR:At5g39660
eggNOG:NOG255195 InParanoid:Q93ZL5 OMA:ANFHESS PhylomeDB:Q93ZL5
ProtClustDB:CLSN2689899 Genevestigator:Q93ZL5 GermOnline:AT5G39660
Uniprot:Q93ZL5
Length = 457
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 133/353 (37%), Positives = 171/353 (48%)
Query: 7 DPAIRLFGKKIAFPSDG---------------EVPVIFSEELPSPXXXXXXXXXXXXXXX 51
DPAI+LFGK I P G ++PV S+
Sbjct: 3 DPAIKLFGKTIPLPELGVVDSSSSYTGFLTETQIPVRLSDSCTGDDDDEEMGDSGLGREE 62
Query: 52 XXXXXXXXXXXTTQQDDTTPPNIDESKIPESPEAN-VNPKTPSIDDETXXXXXXXXXXXQ 110
T + + E + E+N V T I ++T +
Sbjct: 63 GDDVGDGGGESETDKKEEKDSECQEESLRN--ESNDVTTTTSGITEKTETTKAAKTN--E 118
Query: 111 NDASNSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTM 170
+ SQE LKKPDKILPCPRCNSM+TKFCYYNNYN+NQPRHFCK CQRYWTAGGTM
Sbjct: 119 ESGGTACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTM 178
Query: 171 RNVPVGAGRRKNKNCASQY-RHITISEALQAARIDAPNGISHPSVKSNGRVLSFGLDAPI 229
RNVPVGAGRRKNK+ AS Y RH++I+ A +A + A + HP+ +L+FG D+ +
Sbjct: 179 RNVPVGAGRRKNKSPASHYNRHVSITSA-EAMQKVARTDLQHPN---GANLLTFGSDSVL 234
Query: 230 CDSMASVLNLAEKKVLNGTRNGFHGFQEQ-EIPVPC-RGGENGDDCSSGSSITV---SNP 284
C+SMAS LNL EK +L T+ E +I VP + E S + P
Sbjct: 235 CESMASGLNLVEKSLLK-TQTVLQEPNEGLKITVPLNQTNEEAGTVSPLPKVPCFPGPPP 293
Query: 285 MEEVGRNGMQEPLMRSINGFPSPI--PCLPGVPWPYPWNAS--VPPPAFCPSG 333
NG+ ++ +P P C PGV P WN+ +P P PSG
Sbjct: 294 TWPYAWNGVSWTILPF---YPPPAYWSC-PGVS-PGAWNSFTWMPQPN-SPSG 340
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 84/191 (43%), Positives = 103/191 (53%)
Query: 305 PSP-IPCLPGVP--WPYPWNASVPPPAFCPSGFPMSFYPA-AFWNC-GI-PSTWN-MPWI 357
P P +PC PG P WPY WN S + FYP A+W+C G+ P WN W+
Sbjct: 281 PLPKVPCFPGPPPTWPYAWNGV--------SWTILPFYPPPAYWSCPGVSPGAWNSFTWM 332
Query: 358 XXXXXXXXXXXXXXXXXXTLGKHSRDADMIKSENM--DKEELSKEKN---RCVLVPKTLR 412
TLGKHSRD + + + E L +EK+ RC+ VPKTLR
Sbjct: 333 PQPNSPSGSNPNSP----TLGKHSRDENAAEPGTAFDETESLGREKSKPERCLWVPKTLR 388
Query: 413 IDDPNEAAKSSIWATLGIKNESLAGGRLFKGLQSKSDEKSHMAE-----TSPVLRANPAA 467
IDDP EAAKSSIW TLGIK + A F +S + EKS ++E P L+ANPAA
Sbjct: 389 IDDPEEAAKSSIWETLGIKKDENAD--TFGAFRSSTKEKSSLSEGRLPGRRPELQANPAA 446
Query: 468 LSRSLNFHEST 478
LSRS NFHES+
Sbjct: 447 LSRSANFHESS 457
>TAIR|locus:2030006 [details] [associations]
symbol:AT1G29160 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC021043 HOGENOM:HOG000090574 ProtClustDB:CLSN2679679
EMBL:BT029990 IPI:IPI00521362 RefSeq:NP_174211.1 UniGene:At.64845
EnsemblPlants:AT1G29160.1 GeneID:839790 KEGG:ath:AT1G29160
GeneFarm:4458 TAIR:At1g29160 eggNOG:NOG279976 InParanoid:P68350
OMA:LRCYTDG PhylomeDB:P68350 ArrayExpress:P68350
Genevestigator:P68350 GermOnline:AT1G29160 Uniprot:P68350
Length = 175
Score = 319 (117.4 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 54/72 (75%), Positives = 62/72 (86%)
Query: 113 ASNSNSQEKTL-KKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMR 171
A S S + T K+PDKI+PCPRC SM+TKFCY+NNYN+NQPRHFCK CQRYWTAGG +R
Sbjct: 44 AVRSPSSDLTAEKRPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALR 103
Query: 172 NVPVGAGRRKNK 183
NVPVGAGRRK+K
Sbjct: 104 NVPVGAGRRKSK 115
Score = 37 (18.1 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 3 QESKDPAIRLFGKKIAF 19
Q+S+ I+LFGK I F
Sbjct: 4 QDSQ--GIKLFGKTITF 18
>TAIR|locus:2055506 [details] [associations]
symbol:AT2G34140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC002341 EMBL:BT010496 EMBL:AK221308 IPI:IPI00538613
PIR:H84752 RefSeq:NP_180961.1 UniGene:At.43132
EnsemblPlants:AT2G34140.1 GeneID:817975 KEGG:ath:AT2G34140
GeneFarm:4463 TAIR:At2g34140 eggNOG:NOG326560 HOGENOM:HOG000090574
InParanoid:O22967 OMA:IACPRCK PhylomeDB:O22967
ProtClustDB:CLSN2679679 Genevestigator:O22967 GermOnline:AT2G34140
Uniprot:O22967
Length = 170
Score = 310 (114.2 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 51/70 (72%), Positives = 60/70 (85%)
Query: 114 SNSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNV 173
S+S+S K+PDKI+ CPRC SM+TKFCY+NNYN+NQPRHFCK C RYWTAGG +RNV
Sbjct: 42 SSSSSDLTAEKRPDKIIACPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNV 101
Query: 174 PVGAGRRKNK 183
PVGAGRRK+K
Sbjct: 102 PVGAGRRKSK 111
Score = 41 (19.5 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 3 QESKDPAIRLFGKKIAF 19
Q+S+ I+LFGK IAF
Sbjct: 4 QDSQ--GIKLFGKTIAF 18
>TAIR|locus:2032153 [details] [associations]
symbol:AT1G28310 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
EMBL:CP002684 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
EMBL:AC021044 IPI:IPI00656949 RefSeq:NP_001031100.1
UniGene:At.40918 PRIDE:Q2V4K7 EnsemblPlants:AT1G28310.2
GeneID:839725 KEGG:ath:AT1G28310 HOGENOM:HOG000097069 OMA:MIVASSH
ProtClustDB:CLSN2719915 Genevestigator:Q2V4K7 Uniprot:Q2V4K7
Length = 325
Score = 283 (104.7 bits), Expect = 3.8e-27, Sum P(2) = 3.8e-27
Identities = 59/130 (45%), Positives = 77/130 (59%)
Query: 113 ASNSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRN 172
+S+ Q++ ++P L CPRC+S +TKFCYYNNY+++QPRHFCKAC+RYWT GGT+RN
Sbjct: 24 SSHQQQQQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRN 83
Query: 173 VPVGAGRRKNKNCAS-QYRHITISEALQAARIDAPNG---ISHPSVKSNGRVLSFGLDAP 228
VPVG RKNK T + + +PN ISH S N L +GL
Sbjct: 84 VPVGGSYRKNKRVKRPSTATTTTASTVSTTNSSSPNNPHQISHFS-SMNHHPLFYGLS-- 140
Query: 229 ICDSMASVLN 238
D M+S N
Sbjct: 141 --DHMSSCNN 148
Score = 38 (18.4 bits), Expect = 3.8e-27, Sum P(2) = 3.8e-27
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 290 RNGMQEPLMRSINGFPSPIPCLPGVPWPYPWN-ASV 324
+ G + + +INGF S L + WN ASV
Sbjct: 269 KEGKLDQISGNINGFMSSSSSLDPSNYNNMWNNASV 304
>TAIR|locus:2134981 [details] [associations]
symbol:AT4G24060 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC002343 EMBL:AL161560 HOGENOM:HOG000239394 EMBL:AL109619
EMBL:AY037220 EMBL:BT008771 EMBL:AY087686 IPI:IPI00536658
IPI:IPI00548740 PIR:T13450 RefSeq:NP_567693.1 UniGene:At.3662
STRING:Q8LAP8 PRIDE:Q8LAP8 EnsemblPlants:AT4G24060.1 GeneID:828506
KEGG:ath:AT4G24060 GeneFarm:4472 TAIR:At4g24060 eggNOG:NOG270420
InParanoid:Q8LAP8 OMA:SCSAMAT PhylomeDB:Q8LAP8
ProtClustDB:CLSN2917601 Genevestigator:Q8LAP8 GermOnline:AT4G24060
Uniprot:Q8LAP8
Length = 342
Score = 260 (96.6 bits), Expect = 8.3e-26, Sum P(2) = 8.3e-26
Identities = 42/75 (56%), Positives = 55/75 (73%)
Query: 119 QEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAG 178
+ K + D+ + CPRCNS +TKFCYYNNY++ QPR+FCK C+RYWT GG++RN+PVG G
Sbjct: 42 ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGG 101
Query: 179 RRKNKNCASQYRHIT 193
RKNK S I+
Sbjct: 102 SRKNKRSHSSSSDIS 116
Score = 53 (23.7 bits), Expect = 8.3e-26, Sum P(2) = 8.3e-26
Identities = 14/24 (58%), Positives = 14/24 (58%)
Query: 250 NGFHG-FQEQEIPVPCRGGENGDD 272
NGFHG FQ E GGE GDD
Sbjct: 267 NGFHGGFQGGE-----EGGEGGDD 285
>TAIR|locus:2040746 [details] [associations]
symbol:DOF2.4 "DNA binding with one finger 2.4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010089 "xylem development"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 EMBL:AC004684
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
HOGENOM:HOG000239956 EMBL:BT030014 IPI:IPI00519602 PIR:T02525
RefSeq:NP_181295.1 UniGene:At.50120 EnsemblPlants:AT2G37590.1
GeneID:818336 KEGG:ath:AT2G37590 GeneFarm:4464 TAIR:At2g37590
eggNOG:NOG313751 OMA:DEWRSAS PhylomeDB:O80928
ProtClustDB:CLSN2912900 Genevestigator:O80928 GermOnline:AT2G37590
Uniprot:O80928
Length = 330
Score = 253 (94.1 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 53/135 (39%), Positives = 76/135 (56%)
Query: 118 SQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGA 177
+++ + P+ L CPRC S +TKFCY+NNY++ QPRHFCK C+RYWT GG +RNVPVG
Sbjct: 77 ARQANVALPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGG 136
Query: 178 GRRKNKNCASQYRHITISEALQAARIDAPNGISHPSVKSNGRVLSFGLDAPICDSMASVL 237
G R+N+ S + S A N S S N +S L + + S+L
Sbjct: 137 GCRRNRRTKSNSNNNNNSTATS-------NNTSFSS--GNASTISTILSSHYGGNQESIL 187
Query: 238 N--LAEKKVLNGTRN 250
+ L+ +++N T N
Sbjct: 188 SQILSPARLMNPTYN 202
Score = 46 (21.3 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 17/56 (30%), Positives = 24/56 (42%)
Query: 238 NLAEKKVLNGTRNGFHGFQEQEIPVPCRGGENGDDCSSGSSITVS-NPMEEVGRNG 292
NL + N + NGF+ F+ I + S SS+ V NP + V NG
Sbjct: 263 NLEDSSNPNPSANGFYSFESPRIT---SASISSALASQFSSVKVEDNPYKWVNVNG 315
>TAIR|locus:2079492 [details] [associations]
symbol:DAG1 "dof affecting germination 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009845 "seed germination" evidence=IMP]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009639 "response to red or far red
light" evidence=IMP] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634
EMBL:CP002686 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0009639 EMBL:AL138642 HOGENOM:HOG000239394
ProtClustDB:CLSN2684099 IPI:IPI00892346 RefSeq:NP_001118885.1
UniGene:At.989 STRING:B3H6D1 PRIDE:B3H6D1 EnsemblPlants:AT3G61850.4
GeneID:825358 KEGG:ath:AT3G61850 OMA:IGHNTIN Genevestigator:B3H6D1
Uniprot:B3H6D1
Length = 324
Score = 259 (96.2 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 41/76 (53%), Positives = 57/76 (75%)
Query: 112 DASNSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMR 171
+ +N+ + E +P + + CPRCNS +TKFCYYNNY++ QPR+FCK C+RYWT GG++R
Sbjct: 56 NTNNTATMETRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLR 115
Query: 172 NVPVGAGRRKNKNCAS 187
NVPVG RKNK ++
Sbjct: 116 NVPVGGSSRKNKRSST 131
Score = 39 (18.8 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 203 IDAPNGISHPSVKSNGR 219
ID GI H ++ SN R
Sbjct: 257 IDHHQGIGHNTINSNQR 273
>TAIR|locus:2053175 [details] [associations]
symbol:AT2G28810 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC005727 EMBL:BT032877 IPI:IPI00541552 PIR:B84689
RefSeq:NP_850126.1 UniGene:At.38565 PRIDE:Q9ZV33
EnsemblPlants:AT2G28810.1 GeneID:817430 KEGG:ath:AT2G28810
GeneFarm:4462 TAIR:At2g28810 eggNOG:NOG301760 HOGENOM:HOG000239956
InParanoid:Q9ZV33 OMA:DPPINWP PhylomeDB:Q9ZV33
ProtClustDB:CLSN2690762 Genevestigator:Q9ZV33 GermOnline:AT2G28810
Uniprot:Q9ZV33
Length = 340
Score = 274 (101.5 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 65/174 (37%), Positives = 92/174 (52%)
Query: 86 NVNPKTPSIDDETXXXXXXXXXXXQNDASNSNSQEKTLKKPDKILPCPRCNSMDTKFCYY 145
N NP + ET A+ K + P+ L CPRC+S +TKFCY+
Sbjct: 52 NPNPNHHHV--ETAAATTVDPSSLNGQAAERARLAKNSQPPEGALKCPRCDSANTKFCYF 109
Query: 146 NNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNCAS-QYRHITISEALQA-ARI 203
NNYN+ QPRHFCKAC+RYWT GG +RNVPVG G R+NK S + + S+ Q+ + +
Sbjct: 110 NNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKGKSGNSKSSSSSQNKQSTSMV 169
Query: 204 DA--PNGISHPSVKSNGRVLSFGLDAPICDSMASV-LNLAEKKVLNGTRNGFHG 254
+A P S+ +++N + F + + LNLA +NG NG +G
Sbjct: 170 NATSPTNTSNVQLQTNSQ-FPFLPTLQNLTQLGGIGLNLA---AINGN-NGGNG 218
>TAIR|locus:2019499 [details] [associations]
symbol:AT1G64620 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC009519 EMBL:BT004047 EMBL:BT005148 EMBL:AY084898
IPI:IPI00537731 PIR:E96669 RefSeq:NP_564836.1 UniGene:At.35979
IntAct:Q84JQ8 EnsemblPlants:AT1G64620.1 GeneID:842770
KEGG:ath:AT1G64620 GeneFarm:4460 TAIR:At1g64620 eggNOG:NOG247852
HOGENOM:HOG000239394 InParanoid:Q84JQ8 OMA:KPMNEIV PhylomeDB:Q84JQ8
ProtClustDB:CLSN2917381 Genevestigator:Q84JQ8 GermOnline:AT1G64620
Uniprot:Q84JQ8
Length = 352
Score = 269 (99.8 bits), Expect = 4.0e-23, P = 4.0e-23
Identities = 43/69 (62%), Positives = 56/69 (81%)
Query: 119 QEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAG 178
+ K + D+ L CPRCNS++TKFCYYNNY++ QPR+FCK C+RYWTAGG++RN+PVG G
Sbjct: 38 ERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGG 97
Query: 179 RRKNKNCAS 187
RKNK +S
Sbjct: 98 VRKNKRSSS 106
>TAIR|locus:2074850 [details] [associations]
symbol:OBP1 "OBF binding protein 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0042545 "cell wall modification"
evidence=IMP] [GO:0045787 "positive regulation of cell cycle"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0009733 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009751 GO:GO:0045787 GO:GO:0042545 EMBL:AL132976
HOGENOM:HOG000005865 EMBL:X89192 IPI:IPI00523996 PIR:T46072
RefSeq:NP_190610.1 UniGene:At.20758 IntAct:Q39088 PRIDE:Q39088
EnsemblPlants:AT3G50410.1 GeneID:824205 KEGG:ath:AT3G50410
GeneFarm:4389 TAIR:At3g50410 eggNOG:NOG293819 InParanoid:Q39088
OMA:EPRRIAM PhylomeDB:Q39088 Genevestigator:Q39088
GermOnline:AT3G50410 Uniprot:Q39088
Length = 253
Score = 268 (99.4 bits), Expect = 5.2e-23, P = 5.2e-23
Identities = 57/124 (45%), Positives = 77/124 (62%)
Query: 130 LPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKN----KNC 185
LPCPRC+S +TKFCYYNNYN +QPRHFCKAC+RYWT GGT+R+VPVG G RK+ + C
Sbjct: 30 LPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTRKSAKRSRTC 89
Query: 186 A-SQYRHIT--ISEA----LQAARIDAP-----NGISHPSVKSNGRVLSFGLDAPICDSM 233
+ S ++ +S + LQ + P NG++H +S+G+ G +C S
Sbjct: 90 SNSSSSSVSGVVSNSNGVPLQTTPVLFPQSSISNGVTHTVTESDGK----GSALSLCGSF 145
Query: 234 ASVL 237
S L
Sbjct: 146 TSTL 149
>TAIR|locus:2017567 [details] [associations]
symbol:DOF1 "DOF zinc finger protein 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010200
"response to chitin" evidence=IEP] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
EMBL:AC025294 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0010200 HOGENOM:HOG000005865 EMBL:AB017564 IPI:IPI00532555
PIR:T52044 RefSeq:NP_175581.1 UniGene:At.256 PRIDE:O82155
EnsemblPlants:AT1G51700.1 GeneID:841595 KEGG:ath:AT1G51700
GeneFarm:4400 TAIR:At1g51700 eggNOG:NOG318115 InParanoid:O82155
OMA:LASNMQM PhylomeDB:O82155 ProtClustDB:CLSN2679425
Genevestigator:O82155 GermOnline:AT1G51700 Uniprot:O82155
Length = 194
Score = 249 (92.7 bits), Expect = 6.4e-23, Sum P(2) = 6.4e-23
Identities = 41/59 (69%), Positives = 48/59 (81%)
Query: 130 LPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRK-NKNCAS 187
L CPRC+S +TKFCYYNNYN++QPRHFCK C+RYWT GG +RN+PVG G RK NK S
Sbjct: 33 LKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSNKRSGS 91
Score = 38 (18.4 bits), Expect = 6.4e-23, Sum P(2) = 6.4e-23
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 389 SENMDKEELSKEKNRCVLVPKTLRIDDPNEAAKSSIWAT 427
SE ++ +E N ++ L + DPN A+ SS+ A+
Sbjct: 113 SEEKEERVSGQEMNPTRML-YGLPVGDPNGASFSSLLAS 150
>TAIR|locus:2158078 [details] [associations]
symbol:AT5G66940 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
HOGENOM:HOG000005865 EMBL:AB026640 EMBL:BT029523 IPI:IPI00549015
RefSeq:NP_201495.1 UniGene:At.66743 DNASU:836828
EnsemblPlants:AT5G66940.1 GeneID:836828 KEGG:ath:AT5G66940
GeneFarm:4480 TAIR:At5g66940 eggNOG:NOG310676 InParanoid:Q9FGD6
OMA:LINYNAA PhylomeDB:Q9FGD6 ProtClustDB:CLSN2916526
ArrayExpress:Q9FGD6 Genevestigator:Q9FGD6 GermOnline:AT5G66940
Uniprot:Q9FGD6
Length = 225
Score = 265 (98.3 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 56/154 (36%), Positives = 78/154 (50%)
Query: 130 LPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNCASQY 189
L CPRC S +TKFCYYNNYN +QPRHFCK+C+RYWT GGT+R++PVG RK+ + Y
Sbjct: 32 LSCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSRKSSKRSRTY 91
Query: 190 RHITISEALQAARIDAP-NGISHPSVKSNGRVLSF-GLDAPICDSMASVLNLAEKKVLNG 247
+ + + + P SNG + + G + +S++N NG
Sbjct: 92 SSAATTSVVGSRNFPLQATPVLFPQSSSNGGITTAKGSASSFYGGFSSLINYNAAVSRNG 151
Query: 248 TRNGFHGFQEQEIPVPCRGGENGDDCSSGSSITV 281
GF+G + G +D G ITV
Sbjct: 152 PGGGFNG--PDAFGLGLGHGSYYEDVRYGQGITV 183
>TAIR|locus:2144030 [details] [associations]
symbol:TMO6 "TARGET OF MONOPTEROS 6" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0048364
"root development" evidence=IEP] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009944 "polarity
specification of adaxial/abaxial axis" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010075 "regulation of
meristem growth" evidence=RCA] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
HOGENOM:HOG000112244 ProtClustDB:CLSN2684760 EMBL:AB026632
EMBL:BT005866 EMBL:AY086054 IPI:IPI00545477 RefSeq:NP_568920.1
UniGene:At.29177 PaxDb:Q84TE9 PRIDE:Q84TE9
EnsemblPlants:AT5G60200.1 GeneID:836142 KEGG:ath:AT5G60200
GeneFarm:4476 TAIR:At5g60200 eggNOG:NOG268327 OMA:KENATYA
PhylomeDB:Q84TE9 Genevestigator:Q84TE9 GermOnline:AT5G60200
Uniprot:Q84TE9
Length = 257
Score = 258 (95.9 bits), Expect = 7.4e-22, P = 7.4e-22
Identities = 41/62 (66%), Positives = 51/62 (82%)
Query: 126 PDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNC 185
P+ L CPRC+S +TKFCYYNNY++ QPR+FCK+C+RYWT GGT+RN+PVG G RKNK
Sbjct: 51 PELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRS 110
Query: 186 AS 187
S
Sbjct: 111 TS 112
>TAIR|locus:2159275 [details] [associations]
symbol:OBP4 "OBF binding protein 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 EMBL:AB015472 EMBL:AF155817
EMBL:AY056413 EMBL:AY081709 EMBL:AY085856 IPI:IPI00530257
RefSeq:NP_200893.1 UniGene:At.20219 EnsemblPlants:AT5G60850.1
GeneID:836206 KEGG:ath:AT5G60850 GeneFarm:4392 TAIR:At5g60850
eggNOG:NOG253520 HOGENOM:HOG000090954 OMA:WSQSQWT PhylomeDB:Q8LDR0
ProtClustDB:CLSN2686706 Genevestigator:Q8LDR0 GermOnline:AT5G60850
Uniprot:Q8LDR0
Length = 307
Score = 258 (95.9 bits), Expect = 7.4e-22, P = 7.4e-22
Identities = 54/123 (43%), Positives = 70/123 (56%)
Query: 130 LPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNCASQY 189
L CPRCNS++TKFCYYNNYN++QPRHFCK C+RYWT GG +RNVPVG G RK K ++
Sbjct: 51 LKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKAKRSKTKQ 110
Query: 190 RHITISEALQAARIDAPNGISHPSVKSNGRVLSFGLDAPICDSMASVLNLAEKKVLNGTR 249
+ S D + S S+ S L A ++A+V A +V +
Sbjct: 111 VPSSSSADKPTTTQDDHHVEEKSSTGSHSSSESSSLTASNSTTVAAVSVTAAAEVASSVI 170
Query: 250 NGF 252
GF
Sbjct: 171 PGF 173
>TAIR|locus:2039959 [details] [associations]
symbol:DAG2 "DOF AFFECTING GERMINATION 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009409 "response
to cold" evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=IMP] [GO:0009845 "seed germination" evidence=IMP]
[GO:0006598 "polyamine catabolic process" evidence=RCA] [GO:0009698
"phenylpropanoid metabolic process" evidence=RCA] [GO:0042398
"cellular modified amino acid biosynthetic process" evidence=RCA]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0009409
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0009845
GO:GO:0009416 EMBL:AC006418 HOGENOM:HOG000239394 EMBL:AJ237810
EMBL:AJ237811 EMBL:BT003328 EMBL:BT008842 IPI:IPI00533417
IPI:IPI00547843 PIR:G84904 RefSeq:NP_001031549.1 RefSeq:NP_182182.2
UniGene:At.43221 PRIDE:Q9ZPY0 EnsemblPlants:AT2G46590.2
GeneID:819271 KEGG:ath:AT2G46590 GeneFarm:4409 TAIR:At2g46590
eggNOG:NOG252364 InParanoid:Q9ZPY0 OMA:NARPNTI PhylomeDB:Q9ZPY0
ProtClustDB:CLSN2684099 Genevestigator:Q9ZPY0 GermOnline:AT2G46590
Uniprot:Q9ZPY0
Length = 369
Score = 265 (98.3 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 53/133 (39%), Positives = 74/133 (55%)
Query: 85 ANVNPKTPSIDDETXXXXXXXXXXXQNDASNSNSQEKTLKKPDKILPCPRCNSMDTKFCY 144
+N P T + N+ + + E+ + +K L CPRCNS +TKFCY
Sbjct: 36 SNARPNTILTSNGVSTAGATVSGVSNNNNNTAVVAERKARPQEK-LNCPRCNSTNTKFCY 94
Query: 145 YNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNCASQYRHITISEALQAARID 204
YNNY++ QPR+FCK C+RYWT GG++RNVPVG RKNK +S + S LQ
Sbjct: 95 YNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRSSSS----SSSNILQTIPSS 150
Query: 205 APNGISHPSVKSN 217
P+ ++ P + SN
Sbjct: 151 LPD-LNPPILFSN 162
>TAIR|locus:2094746 [details] [associations]
symbol:DOF2 "DOF zinc finger protein 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0019344
"cysteine biosynthetic process" evidence=RCA] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0003677 EMBL:AB023045 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 HOGENOM:HOG000005865 ProtClustDB:CLSN2679425
EMBL:AB017565 EMBL:AY045847 EMBL:AY150391 IPI:IPI00526237
PIR:T52045 RefSeq:NP_188764.1 UniGene:At.257
EnsemblPlants:AT3G21270.1 GeneID:821681 KEGG:ath:AT3G21270
GeneFarm:4401 TAIR:At3g21270 eggNOG:NOG280617 InParanoid:Q94AR6
OMA:GMEIGGS PhylomeDB:Q94AR6 Genevestigator:Q94AR6
GermOnline:AT3G21270 Uniprot:Q94AR6
Length = 204
Score = 256 (95.2 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 42/70 (60%), Positives = 53/70 (75%)
Query: 113 ASNSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRN 172
A Q+ + ++ L CPRC+S +TKFCYYNNYN++QPRHFCK+C+RYWT GG +RN
Sbjct: 13 AKQQQQQQPQFAEQEQ-LKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRN 71
Query: 173 VPVGAGRRKN 182
VPVG G RKN
Sbjct: 72 VPVGGGSRKN 81
>TAIR|locus:2026595 [details] [associations]
symbol:OBP2 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009611 "response to wounding"
evidence=IEP] [GO:0009625 "response to insect" evidence=IEP]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IEP]
[GO:0010439 "regulation of glucosinolate biosynthetic process"
evidence=IEP] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0009595
"detection of biotic stimulus" evidence=RCA] [GO:0009697 "salicylic
acid biosynthetic process" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043900
"regulation of multi-organism process" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] [GO:0003002
"regionalization" evidence=IMP] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 EMBL:CP002684
GO:GO:0005634 GO:GO:0009753 GO:GO:0009611 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 EMBL:AC007583 GO:GO:0009625
HOGENOM:HOG000239956 ProtClustDB:CLSN2690762 GO:GO:0010439
GO:GO:0003002 IPI:IPI00657301 RefSeq:NP_001030988.1
UniGene:At.14846 STRING:Q2V4Q1 PRIDE:Q2V4Q1
EnsemblPlants:AT1G07640.3 GeneID:837277 KEGG:ath:AT1G07640
OMA:NIHENNN Genevestigator:Q2V4Q1 Uniprot:Q2V4Q1
Length = 339
Score = 254 (94.5 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 44/77 (57%), Positives = 56/77 (72%)
Query: 130 LPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAG-RRKNKNCASQ 188
L CPRC+S +TKFCYYNNYN+ QPRHFCK C+RYWT GG +RNVPVG G RR NK +
Sbjct: 85 LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKKGKNG 144
Query: 189 YRHITISEALQAARIDA 205
+ S + Q++ ++A
Sbjct: 145 NLKSSSSSSKQSSSVNA 161
>TAIR|locus:2056588 [details] [associations]
symbol:AT2G28510 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 EMBL:AC006587
EMBL:AY070421 EMBL:BT001954 EMBL:AY085635 IPI:IPI00520106
PIR:G84685 RefSeq:NP_565673.1 UniGene:At.28359 DNASU:817399
EnsemblPlants:AT2G28510.1 GeneID:817399 KEGG:ath:AT2G28510
GeneFarm:4461 TAIR:At2g28510 eggNOG:NOG301259 HOGENOM:HOG000112244
OMA:GRESWNG PhylomeDB:Q8LE43 ProtClustDB:CLSN2688517
Genevestigator:Q8LE43 GermOnline:AT2G28510 Uniprot:Q8LE43
Length = 288
Score = 252 (93.8 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 86/284 (30%), Positives = 125/284 (44%)
Query: 94 IDDETXXXXXXXXXXXQNDASNSNSQEKTLKKPDK------ILPCPRCNSMDTKFCYYNN 147
I +ET N+ +N +E+ KK + CPRC S +TKFCYYNN
Sbjct: 7 ISNETLETILVSSTKGSNN-NNKKMEEEMKKKVSRGELGGEAQNCPRCESPNTKFCYYNN 65
Query: 148 YNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNCASQYRHITISEALQAARIDA-P 206
Y+++QPR+FCK+C+RYWT GGT+RNVPVG G R+NK +S S+ I+
Sbjct: 66 YSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSSS----AFSKNNNNKSINFHT 121
Query: 207 NGISHPSVKSNGRVLSFGLDAPICDSMA-SVLNLAEKKVLNGTRN-GFHG----FQEQEI 260
+ + +P + + SFG D I ++A + L T + GF G +
Sbjct: 122 DPLQNPLI-TGMPPSSFGYDHSIDLNLAFATLQKHHLSSQATTPSFGFGGDLSIYGNSTN 180
Query: 261 PVPCRGGENGDD----C---SSGSSITVSNPMEEVGRNGMQ----EPLMRSINGFPSPIP 309
V GG+NG C SG+ N ++ GM E ++N +
Sbjct: 181 DVGIFGGQNGTYNNSLCYGFMSGNGNNNQNEIKMASTLGMSLEGNERKQENVNNNNNNSE 240
Query: 310 CLPGVPWPYPWNASVPPPAFCPSGFPMSFYPAAFWNCGIPSTWN 353
V W +PW + P P WN G+ S+WN
Sbjct: 241 NPSKVFWGFPWQMTGDSAGVVPEIDP----GRESWN-GMVSSWN 279
>TAIR|locus:2121041 [details] [associations]
symbol:DOF4.7 "DNA binding with one finger 4.7"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010227 "floral organ abscission"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006863 "purine nucleobase
transport" evidence=RCA] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161592
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0010227 EMBL:AL035538 EMBL:BT005767
EMBL:BT006092 IPI:IPI00529950 PIR:T05627 RefSeq:NP_195513.2
UniGene:At.2738 EnsemblPlants:AT4G38000.1 GeneID:829956
KEGG:ath:AT4G38000 GeneFarm:4473 TAIR:At4g38000 eggNOG:NOG286318
HOGENOM:HOG000090627 OMA:TSGNHED PhylomeDB:Q84K52
ProtClustDB:CLSN2918298 Genevestigator:Q84K52 GermOnline:AT4G38000
Uniprot:Q84K52
Length = 246
Score = 252 (93.8 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 41/74 (55%), Positives = 56/74 (75%)
Query: 116 SNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPV 175
+N + +P +L CPRC+S++TKFCYYNNY+++QPRH+CK C+RYWT GG +RNVP+
Sbjct: 29 NNKEPSPATQP--VLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVPI 86
Query: 176 GAG-RRKNKNCASQ 188
G R KNK C+ Q
Sbjct: 87 GGSTRNKNKPCSLQ 100
>TAIR|locus:2155755 [details] [associations]
symbol:AT5G65590 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AB026639 HOGENOM:HOG000090627 EMBL:BT014981 EMBL:BT015717
IPI:IPI00521298 RefSeq:NP_201362.1 UniGene:At.28900
EnsemblPlants:AT5G65590.1 GeneID:836685 KEGG:ath:AT5G65590
GeneFarm:4479 TAIR:At5g65590 eggNOG:NOG306856 InParanoid:Q9LSL6
OMA:SGRENTP PhylomeDB:Q9LSL6 ProtClustDB:CLSN2686628
Genevestigator:Q9LSL6 GermOnline:AT5G65590 Uniprot:Q9LSL6
Length = 316
Score = 250 (93.1 bits), Expect = 6.0e-21, P = 6.0e-21
Identities = 39/54 (72%), Positives = 47/54 (87%)
Query: 130 LPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNK 183
L CPRCNS +TKFCYYNNY+++QPRHFCK+C+RYWT GG +RNVP+G G RK K
Sbjct: 41 LKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRKTK 94
>TAIR|locus:505006172 [details] [associations]
symbol:AT1G47655 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC007519 EMBL:AB493502 IPI:IPI00541489 PIR:E96517
RefSeq:NP_564510.1 UniGene:At.38579 EnsemblPlants:AT1G47655.1
GeneID:841175 KEGG:ath:AT1G47655 GeneFarm:4459 TAIR:At1g47655
eggNOG:NOG248157 HOGENOM:HOG000005865 OMA:GLEISMQ
ProtClustDB:CLSN2917178 Genevestigator:Q9SX97 GermOnline:AT1G47655
Uniprot:Q9SX97
Length = 209
Score = 248 (92.4 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 130 LPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNCASQY 189
LPCPRCNS TKFCYYNNYN+ QPR++CK+C+RYWT GGT+R+VPVG G R++ S
Sbjct: 29 LPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCRRYWTQGGTLRDVPVGGGTRRS----SSK 84
Query: 190 RHITIS 195
RH + S
Sbjct: 85 RHRSFS 90
>TAIR|locus:2134658 [details] [associations]
symbol:AT4G00940 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006457 "protein
folding" evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0009691 "cytokinin biosynthetic process" evidence=RCA]
[GO:0042542 "response to hydrogen peroxide" evidence=RCA]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 EMBL:AF013294 EMBL:AL161491
HOGENOM:HOG000239394 EMBL:AB493666 IPI:IPI00517988 PIR:F85012
PIR:T01552 RefSeq:NP_192003.2 UniGene:At.34496 PRIDE:Q9M161
EnsemblPlants:AT4G00940.1 GeneID:827952 KEGG:ath:AT4G00940
GeneFarm:4466 TAIR:At4g00940 eggNOG:NOG310367 PhylomeDB:Q9M161
ProtClustDB:CLSN2915022 Genevestigator:Q9M161 GermOnline:AT4G00940
Uniprot:Q9M161
Length = 294
Score = 248 (92.4 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 51/117 (43%), Positives = 66/117 (56%)
Query: 125 KPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKN 184
+P + CPRCNS +TKFCYYNNY++ QPR+ CK+C+RYWT GG++RNVPVG G RKNK
Sbjct: 63 RPQEPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKK 122
Query: 185 CASQYRHITISEALQAARIDAP------NGISHPS-VKSNGRVLSFGLDAPICDSMA 234
T S ++ P S+PS N LS +P+ D A
Sbjct: 123 LPFP-NSSTSSSTKNLPDLNPPFVFTSSASSSNPSKTHQNNNDLSLSFSSPMQDKRA 178
>TAIR|locus:2085697 [details] [associations]
symbol:DOF6 "DOF transcription factor 6" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000112244 EMBL:AJ243033
EMBL:AL138657 EMBL:AY062783 EMBL:BT006284 IPI:IPI00532759
PIR:T47501 RefSeq:NP_190147.1 UniGene:At.478
EnsemblPlants:AT3G45610.1 GeneID:823703 KEGG:ath:AT3G45610
GeneFarm:4402 TAIR:At3g45610 eggNOG:NOG258725 OMA:NISNEQM
PhylomeDB:Q9M1E6 ProtClustDB:CLSN2684760 Genevestigator:Q9M1E6
GermOnline:AT3G45610 Uniprot:Q9M1E6
Length = 245
Score = 245 (91.3 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 37/62 (59%), Positives = 52/62 (83%)
Query: 126 PDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNC 185
P++ L CPRC+S +TKFCYYNNY+++QPR+FCK+C+RYWT GG +RN+P+G RK+K
Sbjct: 36 PEQSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPIGGAYRKHKRS 95
Query: 186 AS 187
+S
Sbjct: 96 SS 97
>TAIR|locus:2170753 [details] [associations]
symbol:HCA2 "HIGH CAMBIAL ACTIVITY2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0010067 "procambium histogenesis" evidence=IMP] [GO:0010087
"phloem or xylem histogenesis" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0010087
EMBL:AB009053 GO:GO:0010067 HOGENOM:HOG000239394 EMBL:BT020467
EMBL:BT020576 IPI:IPI00528642 RefSeq:NP_201099.1 UniGene:At.29026
EnsemblPlants:AT5G62940.1 GeneID:836414 KEGG:ath:AT5G62940
GeneFarm:4478 TAIR:At5g62940 eggNOG:NOG236688 InParanoid:Q9FM03
OMA:MALAHSH PhylomeDB:Q9FM03 ProtClustDB:CLSN2687377
Genevestigator:Q9FM03 GermOnline:AT5G62940 Uniprot:Q9FM03
Length = 372
Score = 252 (93.8 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 45/88 (51%), Positives = 58/88 (65%)
Query: 121 KTLKKP-DKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGR 179
+ L+ P D CPRC S TKFCYYNNY+++QPR+FCK C+RYWT GGT+RN+PVG G
Sbjct: 63 RRLRPPHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGC 122
Query: 180 RKNKNCASQYRHITISEALQAARIDAPN 207
RKNK +S + S + + I N
Sbjct: 123 RKNKKPSSSNSSSSTSSGKKPSNIVTAN 150
>TAIR|locus:2079954 [details] [associations]
symbol:AT3G52440 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002686 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 EMBL:AL050300
IPI:IPI00523054 PIR:T08455 RefSeq:NP_190812.1 UniGene:At.53903
EnsemblPlants:AT3G52440.1 GeneID:824409 KEGG:ath:AT3G52440
GeneFarm:4465 TAIR:At3g52440 eggNOG:NOG271786 InParanoid:Q9SVC5
OMA:YANFLNP PhylomeDB:Q9SVC5 ProtClustDB:CLSN2915499
Genevestigator:Q9SVC5 Uniprot:Q9SVC5
Length = 247
Score = 238 (88.8 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 46/88 (52%), Positives = 59/88 (67%)
Query: 128 KILP-CPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNCA 186
+I P CPRC S +TKFCYYNNY++ QPR+FCK C+RYWT GG++RNVPVG G RK++
Sbjct: 22 EITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRPK 81
Query: 187 SQYRHITISEALQAARIDAPNGISHPSV 214
S + T + A P G S PS+
Sbjct: 82 SSSGNNTKTSL--TANSGNPGGGS-PSI 106
>TAIR|locus:2133079 [details] [associations]
symbol:DOF4.4 "DNA-binding with One Finger 4.4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010154 "fruit development" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:2000032 "regulation of secondary shoot formation" evidence=IMP]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0010154 HOGENOM:HOG000097076 ProtClustDB:CLSN2685338
GO:GO:2000032 EMBL:AB493689 IPI:IPI00543578 PIR:T10647
RefSeq:NP_193837.1 UniGene:At.54450 PRIDE:Q9SUA9 DNASU:827852
EnsemblPlants:AT4G21050.1 GeneID:827852 KEGG:ath:AT4G21050
GeneFarm:4469 TAIR:At4g21050 eggNOG:NOG287569 OMA:NYSESQP
PhylomeDB:Q9SUA9 Genevestigator:Q9SUA9 GermOnline:AT4G21050
Uniprot:Q9SUA9
Length = 210
Score = 237 (88.5 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 54/141 (38%), Positives = 78/141 (55%)
Query: 111 NDASNSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTM 170
N +N ++Q LK+P CPRC+S +TKFC+YNNY+ +QPR+FCK C+RYWT GG +
Sbjct: 5 NVFANEDNQVNGLKRPPPSRVCPRCDSDNTKFCFYNNYSESQPRYFCKNCRRYWTHGGAL 64
Query: 171 RNVPVGAGRRKNKNCASQYRHITISEALQAARIDAPNGISHPSVKSNGRVLSFGLDAPIC 230
RN+PVG RK K + +ISE + + + ++N V SF DA
Sbjct: 65 RNIPVGGSCRKPKRL--KVDQSSISEMVSVENQPINHQSFRQTQENNEFVRSF--DASSS 120
Query: 231 DSMASVLN-LAEKKVLNGTRN 250
++ +V N L+G N
Sbjct: 121 ATVTAVPNHFGYLSELHGVTN 141
>TAIR|locus:2181773 [details] [associations]
symbol:AT5G02460 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
HOGENOM:HOG000239956 EMBL:AL162874 EMBL:AL162971 EMBL:BX829408
IPI:IPI00547892 PIR:T48267 RefSeq:NP_195866.1 UniGene:At.33412
ProteinModelPortal:Q9LZ56 STRING:Q9LZ56 PRIDE:Q9LZ56
EnsemblPlants:AT5G02460.1 GeneID:830976 KEGG:ath:AT5G02460
GeneFarm:4474 TAIR:At5g02460 eggNOG:NOG272365 InParanoid:Q9LZ56
OMA:HHRAMAN PhylomeDB:Q9LZ56 ProtClustDB:CLSN2916772
Genevestigator:Q9LZ56 GermOnline:AT5G02460 Uniprot:Q9LZ56
Length = 399
Score = 250 (93.1 bits), Expect = 3.6e-19, P = 3.6e-19
Identities = 39/58 (67%), Positives = 49/58 (84%)
Query: 126 PDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNK 183
P+ L CPRC+S +TKFCY+NNY++ QPRHFCKAC+RYWT GG +R+VPVG G R+NK
Sbjct: 91 PETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGGGCRRNK 148
>TAIR|locus:2027027 [details] [associations]
symbol:AT1G21340 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
EMBL:CP002684 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 EMBL:AC015447
EMBL:DQ446268 IPI:IPI00548608 RefSeq:NP_173556.1 UniGene:At.51708
EnsemblPlants:AT1G21340.1 GeneID:838733 KEGG:ath:AT1G21340
GeneFarm:4455 TAIR:At1g21340 eggNOG:NOG324820 InParanoid:P68349
OMA:GRNENRP PhylomeDB:P68349 ProtClustDB:CLSN2913539
ArrayExpress:P68349 Genevestigator:P68349 Uniprot:P68349
Length = 260
Score = 230 (86.0 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 37/60 (61%), Positives = 47/60 (78%)
Query: 132 CPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNCASQYRH 191
CPRC S +TKFCYYNNY+++QPR+FCK C+RYWT GG++RN+PVG G RK + Q H
Sbjct: 40 CPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGGCRKRSR-SRQNSH 98
>TAIR|locus:2133064 [details] [associations]
symbol:DOF4.3 "AT4G21040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478
PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
HOGENOM:HOG000097076 ProtClustDB:CLSN2685338 EMBL:AB493688
IPI:IPI00544172 PIR:T10646 RefSeq:NP_193836.1 UniGene:At.64193
DNASU:827851 EnsemblPlants:AT4G21040.1 GeneID:827851
KEGG:ath:AT4G21040 GeneFarm:4468 TAIR:At4g21040 eggNOG:NOG279085
PhylomeDB:Q9SUB0 Genevestigator:Q9SUB0 Uniprot:Q9SUB0
Length = 232
Score = 211 (79.3 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 39/80 (48%), Positives = 52/80 (65%)
Query: 111 NDASNSNSQEKTLKKPDKILP--CPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGG 168
N +N ++Q +K P P C RC+S +TKFCYYNNY+ QPR+FCK C+RYWT GG
Sbjct: 5 NVVANEDNQVNDVKPPPPP-PRVCARCDSDNTKFCYYNNYSEFQPRYFCKNCRRYWTHGG 63
Query: 169 TMRNVPVGAGRRKNKNCASQ 188
+RNVP+G R + +Q
Sbjct: 64 ALRNVPIGGSSRAKRTRINQ 83
>TAIR|locus:2127353 [details] [associations]
symbol:DOF4.5 "DNA-binding with One Finger 4.5"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478
PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161554 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 EMBL:AL021960
HOGENOM:HOG000097076 ProtClustDB:CLSN2685338 eggNOG:NOG279085
EMBL:AB493690 IPI:IPI00526819 PIR:T04939 RefSeq:NP_193840.1
UniGene:At.64194 DNASU:827855 EnsemblPlants:AT4G21080.1
GeneID:827855 KEGG:ath:AT4G21080 GeneFarm:4470 TAIR:At4g21080
OMA:ARMVSVE PhylomeDB:O49550 Genevestigator:O49550
GermOnline:AT4G21080 Uniprot:O49550
Length = 249
Score = 208 (78.3 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 50/134 (37%), Positives = 73/134 (54%)
Query: 111 NDASNSNSQEKTLKKPDKILP--CPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGG 168
N +N ++Q +K P P C RC+S +TKFCYYNNY QPR+FCK C+RYWT GG
Sbjct: 5 NVFANEDNQVNDVKPPPPP-PRVCARCDSDNTKFCYYNNYCEFQPRYFCKNCRRYWTHGG 63
Query: 169 TMRNVPVGAGRRKNKNCASQYRHITISEALQAARIDAPNGISHP--SVKSNGRVL-SFGL 225
+RN+P+G R + +Q + ++ G + P +V+ N ++ SFG
Sbjct: 64 ALRNIPIGGSSRAKRARVNQ------PSVARMVSVETQRGNNQPFSNVQENVHLVGSFG- 116
Query: 226 DAPICDSMASVLNL 239
A S+ +V NL
Sbjct: 117 -ASSSSSVGAVGNL 129
>TAIR|locus:2133149 [details] [associations]
symbol:ATDOF4.2 "AT4G21030" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010214 "seed coat development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0048359 "mucilage metabolic process involved seed coat
development" evidence=IMP] [GO:0048825 "cotyledon development"
evidence=IMP] [GO:2000032 "regulation of secondary shoot formation"
evidence=IMP] InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478
PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634 GO:GO:0045893
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0048825 EMBL:AB493687 IPI:IPI00542373
PIR:T10645 RefSeq:NP_193835.1 UniGene:At.54449
EnsemblPlants:AT4G21030.1 GeneID:827850 KEGG:ath:AT4G21030
GeneFarm:4467 TAIR:At4g21030 eggNOG:NOG254967 HOGENOM:HOG000097076
OMA:QPRYKCK PhylomeDB:Q9SUB1 ProtClustDB:CLSN2685338
Genevestigator:Q9SUB1 GO:GO:0048359 GO:GO:2000032 Uniprot:Q9SUB1
Length = 194
Score = 153 (58.9 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 27/60 (45%), Positives = 37/60 (61%)
Query: 116 SNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPV 175
+ E + P ++ CPRC S T+F Y+NN +QPR+ CK C R WT GG +RN+PV
Sbjct: 9 NEDNEMNVMPPPRV--CPRCYSDQTRFSYFNNNKKSQPRYKCKNCCRCWTHGGVLRNIPV 66
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 478 423 0.00084 118 3 11 23 0.46 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 622 (66 KB)
Total size of DFA: 291 KB (2150 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.86u 0.13s 38.99t Elapsed: 00:00:02
Total cpu time: 38.86u 0.13s 38.99t Elapsed: 00:00:02
Start: Sat May 11 11:11:46 2013 End: Sat May 11 11:11:48 2013