BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011752
(478 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LFV3|CDF3_ARATH Cyclic dof factor 3 OS=Arabidopsis thaliana GN=CDF3 PE=1 SV=2
Length = 448
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 244/491 (49%), Positives = 296/491 (60%), Gaps = 60/491 (12%)
Query: 1 MRQESKDPAIRLFGKKIAFPSDGEVPVIFSEELPSPAAKEECSIEAEEEKAEEDSSAVKA 60
M E++DPAI+LFG KI FPS E V ++ E ++ +D S K
Sbjct: 1 MMMETRDPAIKLFGMKIPFPSVFESAVTVEDD------------EEDDWSGGDDKSPEKV 48
Query: 61 AETTQQDDTTPPNIDESKIPESPEANVNPKTPSIDDETAKSK-AAKSEKSQNDASNSNSQ 119
TP D++ + + N K ++D E A S +S + D +
Sbjct: 49 ---------TPELSDKNNNNCNDNSFNNSKPETLDKEEATSTDQIESSDTPEDNQQTTPD 99
Query: 120 EKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGR 179
KTLKKP KILPCPRC SM+TKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGR
Sbjct: 100 GKTLKKPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGR 159
Query: 180 RKNKNCASQYRHITISEALQAARIDAPNGISHPSVKSNGRVLSFGLDAP---ICDSMASV 236
RKNK+ +S YRHITISEAL+AAR+D P +++N RVLSFGL+A + M V
Sbjct: 160 RKNKSSSSHYRHITISEALEAARLD-------PGLQANTRVLSFGLEAQQQHVAAPMTPV 212
Query: 237 LNLAE-KKVLNGTRNGFHGFQEQEIPVPCRGGENGDDCSSGSSITVSNPM---EEVGRNG 292
+ L E +KV NG RN FHG +Q + ENGDDCSSGSS+T SN E ++G
Sbjct: 213 MKLQEDQKVSNGARNRFHGLADQRLVARV---ENGDDCSSGSSVTTSNNHSVDESRAQSG 269
Query: 293 --MQEPLMRSINGFPSPIPCLPGVPWPYPWN-ASVPPPAFCPSGFPMSFYPAAFWNCGIP 349
++ + + N + C+PGVPWPY WN A PP + P G+PM FYP
Sbjct: 270 SVVEAQMNNNNNNNMNGYACIPGVPWPYTWNPAMPPPGFYPPPGYPMPFYPY-------- 321
Query: 350 STWNMPWISP-QSSPNQKSPSSGPNSPTLGKHSRDADMIKSENMDKEELSKEKNRCVLVP 408
W +P + P QSS S NSPTLGKH RD K +N E K+K CVLVP
Sbjct: 322 --WTIPMLPPHQSSSPISQKCSNTNSPTLGKHPRDEGSSKKDN---ETERKQKAGCVLVP 376
Query: 409 KTLRIDDPNEAAKSSIWATLGIKNESL--AGGRLFKGLQSKSDEKSH-MAETSPVLRANP 465
KTLRIDDPNEAAKSSIW TLGIKNE++ AGG +FKG K+ ++ AE SPVL ANP
Sbjct: 377 KTLRIDDPNEAAKSSIWTTLGIKNEAMCKAGG-MFKGFDHKTKMYNNDKAENSPVLSANP 435
Query: 466 AALSRSLNFHE 476
AALSRS NFHE
Sbjct: 436 AALSRSHNFHE 446
>sp|Q93ZL5|CDF2_ARATH Cyclic dof factor 2 OS=Arabidopsis thaliana GN=CDF2 PE=1 SV=2
Length = 457
Score = 308 bits (789), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 222/510 (43%), Positives = 281/510 (55%), Gaps = 93/510 (18%)
Query: 7 DPAIRLFGKKIAFPSDG---------------EVPVIFSEELPSPAAKEECSIEA-EEEK 50
DPAI+LFGK I P G ++PV S+ EE E+
Sbjct: 3 DPAIKLFGKTIPLPELGVVDSSSSYTGFLTETQIPVRLSDSCTGDDDDEEMGDSGLGREE 62
Query: 51 AEEDSSAVKAAETTQQDDTTPPNIDESKIPESPEANVNPKTPSIDDETAKSKAAKSEKSQ 110
++ +ET ++++ +ES ES +V T I ++T +KAAK+ ++
Sbjct: 63 GDDVGDGGGESETDKKEEKDSECQEESLRNES--NDVTTTTSGITEKTETTKAAKT--NE 118
Query: 111 NDASNSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTM 170
+ SQE LKKPDKILPCPRCNSM+TKFCYYNNYN+NQPRHFCK CQRYWTAGGTM
Sbjct: 119 ESGGTACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTM 178
Query: 171 RNVPVGAGRRKNKNCASQY-RHITIS--EALQ-AARIDAPNGISHPSVKSNGRVLSFGLD 226
RNVPVGAGRRKNK+ AS Y RH++I+ EA+Q AR D + HP + +L+FG D
Sbjct: 179 RNVPVGAGRRKNKSPASHYNRHVSITSAEAMQKVARTD----LQHP---NGANLLTFGSD 231
Query: 227 APICDSMASVLNLAEKKVLNGTRNGFHGFQEQEIPVPCRGGENGDDCSSGSSITVSNPME 286
+ +C+SMAS LNL EK +L T+ E G ITV P+
Sbjct: 232 SVLCESMASGLNLVEKSLLK-TQTVLQEPNE------------------GLKITV--PLN 270
Query: 287 EVGRN-GMQEPLMRSINGFPSPIPCLPGVP--WPYPWNASVPPPAFCPSGFPMSFY-PAA 342
+ G PL + +PC PG P WPY WN S + FY P A
Sbjct: 271 QTNEEAGTVSPLPK--------VPCFPGPPPTWPYAWNGV--------SWTILPFYPPPA 314
Query: 343 FWNC-GI-PSTWN-MPWISPQSSPNQKSPS-SGPNSPTLGKHSRDADMIKSENM--DKEE 396
+W+C G+ P WN W+ P SPS S PNSPTLGKHSRD + + + E
Sbjct: 315 YWSCPGVSPGAWNSFTWM-----PQPNSPSGSNPNSPTLGKHSRDENAAEPGTAFDETES 369
Query: 397 LSKEKN---RCVLVPKTLRIDDPNEAAKSSIWATLGIKNESLAGGRLFKGLQSKSDEKSH 453
L +EK+ RC+ VPKTLRIDDP EAAKSSIW TLGIK + A F +S + EKS
Sbjct: 370 LGREKSKPERCLWVPKTLRIDDPEEAAKSSIWETLGIKKDENAD--TFGAFRSSTKEKSS 427
Query: 454 MAE-----TSPVLRANPAALSRSLNFHEST 478
++E P L+ANPAALSRS NFHES+
Sbjct: 428 LSEGRLPGRRPELQANPAALSRSANFHESS 457
>sp|Q8W1E3|CDF1_ARATH Cyclic dof factor 1 OS=Arabidopsis thaliana GN=CDF1 PE=1 SV=2
Length = 298
Score = 246 bits (628), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 168/376 (44%), Positives = 196/376 (52%), Gaps = 115/376 (30%)
Query: 107 EKSQNDA-SNSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWT 165
EK+QN ++ + ++KTLKKP KILPCPRCNSM+TKFCYYNNYN+NQPRHFCKACQRYWT
Sbjct: 30 EKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWT 89
Query: 166 AGGTMRNVPVGAGRRKNKNCA--SQYRHITISEALQAARIDAPNGISHPSVKSNGRVLSF 223
+GGTMR+VP+GAGRRKNKN + S Y H+TISE +NG VLSF
Sbjct: 90 SGGTMRSVPIGAGRRKNKNNSPTSHYHHVTISE-------------------TNGPVLSF 130
Query: 224 GLDAPICDSMASVLNLAEKKVLNGTRNGFHGFQEQEIPVPCRGGENGDDCSSGSSITVSN 283
L D S +K++ EN D+
Sbjct: 131 SLGD---DQKVSSNRFGNQKLVARI-------------------ENNDE----------- 157
Query: 284 PMEEVGRNGMQEPLMRSINGFPSPIPCLPGVPWPYPWNASVPPPAFCPSGFPMSFYPAAF 343
RS N + + C PGV WPY WN PAF P YP +
Sbjct: 158 ---------------RSNNNTSNGLNCFPGVSWPYTWN-----PAFYP------VYP--Y 189
Query: 344 WNCGIPSTWNMPWISPQSSPNQKSPSSGPNSPTLGKHSRDADMIKSENMDKEELSKEKNR 403
W S P SP S + TLGKHSRD D + K++N
Sbjct: 190 W----------------SMPVLSSPVSSSPTSTLGKHSRDEDETVKQ--------KQRNG 225
Query: 404 CVLVPKTLRIDDPNEAAKSSIWATLGIKNESLAGGRLFKGLQSKSDEK---SHMAETSPV 460
VLVPKTLRIDDPNEAAKSSIW TLGIKNE +F G SK + K ETS V
Sbjct: 226 SVLVPKTLRIDDPNEAAKSSIWTTLGIKNEV-----MFNGFGSKKEVKLSNKEETETSLV 280
Query: 461 LRANPAALSRSLNFHE 476
L ANPAALSRS+NFHE
Sbjct: 281 LCANPAALSRSINFHE 296
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/22 (68%), Positives = 18/22 (81%)
Query: 4 ESKDPAIRLFGKKIAFPSDGEV 25
E+KDPAI+LFG KI FP+ EV
Sbjct: 3 ETKDPAIKLFGMKIPFPTVLEV 24
>sp|Q9SEZ3|CDF5_ARATH Cyclic dof factor 5 OS=Arabidopsis thaliana GN=CDF5 PE=2 SV=1
Length = 399
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 138/362 (38%), Positives = 175/362 (48%), Gaps = 97/362 (26%)
Query: 123 LKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKN 182
LKKPDK++PCPRC S +TKFCYYNNYN+NQPR+FC+ CQRYWTAGG+MRNVPVG+GRRKN
Sbjct: 125 LKKPDKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKN 184
Query: 183 KNCASQYRHITISEALQAARIDAPNGISHPSVKSNGRVLSFGLDAPICDSMASVLNLAEK 242
K S + LQ D N S G +LSFG S +SV
Sbjct: 185 KGWPSSNHY------LQVTSEDCDNNNS-------GTILSFG------SSESSV------ 219
Query: 243 KVLNGTRNGFHGFQEQEIPVPCRGGENGDDCS-SGSSITVSNPMEEVGRNGMQEPLMRSI 301
T G H ++GD S S++ N +S
Sbjct: 220 -----TETGKH--------------QSGDTAKISADSVSQEN---------------KSY 245
Query: 302 NGFPSPIPCLP--GVPWPYPWNASVPPPAFCPSGFPMSFYPAAF-WNCGIPSTWNMPWIS 358
GF P LP PWPY W+ P+G SFYP F W C +P I
Sbjct: 246 QGFLPPQVMLPNNSSPWPYQWS---------PTGPNASFYPVPFYWGCTVP-------IY 289
Query: 359 PQSSPNQKSPSSGPNSPTLGKHSRDADMIKSENMDKEELSKEKNRCVLVPKTLRIDDPNE 418
P S S LGK SRD + + R LV ++LR++ E
Sbjct: 290 PTSE----------TSSCLGKRSRDQTEGRIN---DTNTTITTTRARLVSESLRMNI--E 334
Query: 419 AAKSSIWATLGIKNE-SLAGGRLFKGLQSK--SDEKSHMAETSPVLRANPAALSRSLNFH 475
A+KS++W+ L K E G LF G +K S+ S ++ETS L+ANPAA+SR++NF
Sbjct: 335 ASKSAVWSKLPTKPEKKTQGFSLFNGFDTKGNSNRSSLVSETSHSLQANPAAMSRAMNFR 394
Query: 476 ES 477
ES
Sbjct: 395 ES 396
>sp|Q9LQX4|DOF13_ARATH Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana GN=DOF1.3
PE=2 SV=1
Length = 366
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 179/392 (45%), Gaps = 101/392 (25%)
Query: 94 IDDETAKSKAAKSEKSQNDASNSNSQEKT--LKKPDKILPCPRCNSMDTKFCYYNNYNIN 151
+++E+ ++ ++ + ++ +EKT LKKPDKILPCPRCNS DTKFCYYNNYN+N
Sbjct: 67 LNNESKETSENSDDQHSEITTITSEEEKTTELKKPDKILPCPRCNSADTKFCYYNNYNVN 126
Query: 152 QPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNCASQYRHITISEALQAARIDAPNGISH 211
QPRHFC+ CQRYWTAGG+MR VPVG+GRRKNK S + L D N S
Sbjct: 127 QPRHFCRKCQRYWTAGGSMRIVPVGSGRRKNKGWVSS------DQYLHITSEDTDNYNS- 179
Query: 212 PSVKSNGRVLSFGLDAPICDSMASVLNLAEKKVLNGTRNGFHGFQEQEIPVPCRGGENGD 271
S+ ++LSF E+ D
Sbjct: 180 ----SSTKILSF--------------------------------------------ESSD 191
Query: 272 DCSSGSSITVSNPMEEVGRNGMQEPLMRSINGF-----PSPIPCLPGVPWPYPWNASVPP 326
+ SN EV N EP+ + N F P P P PWPY + P
Sbjct: 192 SLVTERPKHQSN---EVKINA--EPVSQEPNNFQGLLPPQASPVSP--PWPYQY---PPN 241
Query: 327 PAFCPSGFPMSFYPAAFWNCGIPSTWNMPWISPQSSPNQKSPSSGPNSPTLGKHSRDADM 386
P+F ++ +W C IP W S+ S LGK +RD
Sbjct: 242 PSF--------YHMPVYWGCAIP-VW----------------STLDTSTCLGKRTRDE-- 274
Query: 387 IKSENMDKEELSKEKNRCVLVPKTLRIDDPNEAAKSSIWATLGIKNESLAGGRLF-KGLQ 445
E + + + + E+ +L ++++ ++ + A + +W + + E F G +
Sbjct: 275 TSHETVKESKNAFERTSLLLESQSIK-NETSMATNNHVWYPVPMTREKTQEFSFFSNGAE 333
Query: 446 SKSDEKSHMAETSPVLRANPAALSRSLNFHES 477
+KS + ET L+ANPAA++RS+NF ES
Sbjct: 334 TKSSNNRFVPETYLNLQANPAAMARSMNFRES 365
>sp|P68350|DOF15_ARATH Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana GN=DOF1.5
PE=1 SV=1
Length = 175
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 50/60 (83%), Positives = 57/60 (95%)
Query: 124 KKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNK 183
K+PDKI+PCPRC SM+TKFCY+NNYN+NQPRHFCK CQRYWTAGG +RNVPVGAGRRK+K
Sbjct: 56 KRPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSK 115
>sp|O22967|CDF4_ARATH Cyclic dof factor 4 OS=Arabidopsis thaliana GN=CDF4 PE=2 SV=1
Length = 170
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 77/133 (57%), Gaps = 23/133 (17%)
Query: 51 AEEDSSAVKAAETTQQDDTTPPNIDESKIPESPEANVNPKTPSIDDETAKSKAAKSEKSQ 110
A +DS +K T +T +E P EA + ++ S D TA+
Sbjct: 2 ATQDSQGIKLFGKTIAFNTRTIKNEEETHPPEQEATIAVRSSSSSDLTAE---------- 51
Query: 111 NDASNSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTM 170
K+PDKI+ CPRC SM+TKFCY+NNYN+NQPRHFCK C RYWTAGG +
Sbjct: 52 -------------KRPDKIIACPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGAL 98
Query: 171 RNVPVGAGRRKNK 183
RNVPVGAGRRK+K
Sbjct: 99 RNVPVGAGRRKSK 111
>sp|Q39088|DOF34_ARATH Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana GN=DOF3.4
PE=1 SV=2
Length = 253
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 72/124 (58%), Gaps = 20/124 (16%)
Query: 130 LPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRK----NKNC 185
LPCPRC+S +TKFCYYNNYN +QPRHFCKAC+RYWT GGT+R+VPVG G RK ++ C
Sbjct: 30 LPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTRKSAKRSRTC 89
Query: 186 ASQYRHITISEA-------LQAARIDAP-----NGISHPSVKSNGRVLSFGLDAPICDSM 233
++ LQ + P NG++H +S+G+ G +C S
Sbjct: 90 SNSSSSSVSGVVSNSNGVPLQTTPVLFPQSSISNGVTHTVTESDGK----GSALSLCGSF 145
Query: 234 ASVL 237
S L
Sbjct: 146 TSTL 149
>sp|Q8LDR0|DOF54_ARATH Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4
PE=2 SV=2
Length = 307
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 47/54 (87%)
Query: 130 LPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNK 183
L CPRCNS++TKFCYYNNYN++QPRHFCK C+RYWT GG +RNVPVG G RK K
Sbjct: 51 LKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKAK 104
>sp|Q9M2U1|DOF36_ARATH Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana GN=DOF3.6
PE=1 SV=2
Length = 323
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 53/69 (76%)
Query: 126 PDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNC 185
P+ L CPRC+S +TKFCY+NNY++ QPRHFCK C+RYWT GG++RNVPVG G R+NK
Sbjct: 72 PEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFRRNKRS 131
Query: 186 ASQYRHITI 194
S+ + +
Sbjct: 132 KSRSKSTVV 140
>sp|P38564|MNB1A_MAIZE Dof zinc finger protein MNB1A OS=Zea mays GN=MNB1A PE=1 SV=2
Length = 238
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 41/51 (80%), Positives = 44/51 (86%)
Query: 131 PCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRK 181
PCPRC S DTKFCYYNNYN +QPRHFCK C+RYWT GGT+RNVPVG G RK
Sbjct: 48 PCPRCASRDTKFCYYNNYNTSQPRHFCKGCRRYWTKGGTLRNVPVGGGTRK 98
>sp|Q84TE9|DOF53_ARATH Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3
PE=2 SV=1
Length = 257
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 51/62 (82%)
Query: 126 PDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNC 185
P+ L CPRC+S +TKFCYYNNY++ QPR+FCK+C+RYWT GGT+RN+PVG G RKNK
Sbjct: 51 PELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRS 110
Query: 186 AS 187
S
Sbjct: 111 TS 112
>sp|Q9ZV33|DOF22_ARATH Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana GN=DOF2.2
PE=2 SV=2
Length = 340
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 57/94 (60%)
Query: 88 NPKTPSIDDETAKSKAAKSEKSQNDASNSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNN 147
NP ETA + A+ K + P+ L CPRC+S +TKFCY+NN
Sbjct: 52 NPNPNHHHVETAAATTVDPSSLNGQAAERARLAKNSQPPEGALKCPRCDSANTKFCYFNN 111
Query: 148 YNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRK 181
YN+ QPRHFCKAC+RYWT GG +RNVPVG G R+
Sbjct: 112 YNLTQPRHFCKACRRYWTRGGALRNVPVGGGCRR 145
>sp|Q8LAP8|DOF46_ARATH Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6
PE=2 SV=2
Length = 342
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 52/65 (80%)
Query: 119 QEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAG 178
+ K + D+ + CPRCNS +TKFCYYNNY++ QPR+FCK C+RYWT GG++RN+PVG G
Sbjct: 42 ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGG 101
Query: 179 RRKNK 183
RKNK
Sbjct: 102 SRKNK 106
>sp|Q9FZA4|DOF14_ARATH Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana GN=DOF1.4
PE=2 SV=1
Length = 311
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 48/54 (88%)
Query: 130 LPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNK 183
L CPRC+S +TKFCYYNNY+++QPRHFCKAC+RYWT GGT+RNVPVG RKNK
Sbjct: 27 LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGSYRKNK 80
>sp|O24463|PBF_MAIZE Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=1 SV=1
Length = 328
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 55/67 (82%), Gaps = 4/67 (5%)
Query: 124 KKPDKILP----CPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGR 179
+KP LP CPRC+S +TKFCYYNNY+++QPR+FCKAC+RYWT GGT+RNVP+G G
Sbjct: 50 RKPRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGGC 109
Query: 180 RKNKNCA 186
RKNK+ +
Sbjct: 110 RKNKHAS 116
>sp|Q43385|DOF37_ARATH Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7
PE=1 SV=2
Length = 296
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 49/59 (83%)
Query: 125 KPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNK 183
+P + + CPRCNS +TKFCYYNNY++ QPR+FCK C+RYWT GG++RNVPVG RKNK
Sbjct: 69 RPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNK 127
>sp|Q8L9V6|DOF11_ARATH Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1
PE=1 SV=2
Length = 331
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
Query: 130 LPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAG-RRKNK 183
L CPRC+S +TKFCYYNNYN+ QPRHFCK C+RYWT GG +RNVPVG G RR NK
Sbjct: 77 LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNK 131
>sp|O80928|DOF24_ARATH Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4
PE=2 SV=1
Length = 330
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 51/66 (77%)
Query: 118 SQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGA 177
+++ + P+ L CPRC S +TKFCY+NNY++ QPRHFCK C+RYWT GG +RNVPVG
Sbjct: 77 ARQANVALPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGG 136
Query: 178 GRRKNK 183
G R+N+
Sbjct: 137 GCRRNR 142
>sp|Q94AR6|DOF31_ARATH Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1
PE=2 SV=2
Length = 204
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 47/53 (88%)
Query: 130 LPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKN 182
L CPRC+S +TKFCYYNNYN++QPRHFCK+C+RYWT GG +RNVPVG G RKN
Sbjct: 29 LKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKN 81
>sp|Q9LZ56|DOF51_ARATH Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana GN=DOF5.1
PE=2 SV=1
Length = 399
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 49/58 (84%)
Query: 126 PDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNK 183
P+ L CPRC+S +TKFCY+NNY++ QPRHFCKAC+RYWT GG +R+VPVG G R+NK
Sbjct: 91 PETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGGGCRRNK 148
>sp|Q84JQ8|DOF18_ARATH Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8
PE=2 SV=1
Length = 352
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 47/52 (90%)
Query: 127 DKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAG 178
D+ L CPRCNS++TKFCYYNNY++ QPR+FCK C+RYWTAGG++RN+PVG G
Sbjct: 46 DQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGG 97
>sp|Q9LSL6|DOF57_ARATH Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7
PE=2 SV=1
Length = 316
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 47/54 (87%)
Query: 130 LPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNK 183
L CPRCNS +TKFCYYNNY+++QPRHFCK+C+RYWT GG +RNVP+G G RK K
Sbjct: 41 LKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRKTK 94
>sp|O82155|DOF17_ARATH Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana GN=DOF1.7
PE=2 SV=1
Length = 194
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 45/52 (86%)
Query: 130 LPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRK 181
L CPRC+S +TKFCYYNNYN++QPRHFCK C+RYWT GG +RN+PVG G RK
Sbjct: 33 LKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRK 84
>sp|Q9M1E6|DOF32_ARATH Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana GN=DOF3.2
PE=2 SV=1
Length = 245
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 52/62 (83%)
Query: 126 PDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNC 185
P++ L CPRC+S +TKFCYYNNY+++QPR+FCK+C+RYWT GG +RN+P+G RK+K
Sbjct: 36 PEQSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPIGGAYRKHKRS 95
Query: 186 AS 187
+S
Sbjct: 96 SS 97
>sp|Q84K52|DOF47_ARATH Dof zinc finger protein DOF4.7 OS=Arabidopsis thaliana GN=DOF4.7
PE=2 SV=1
Length = 246
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 129 ILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAG-RRKNKNCAS 187
+L CPRC+S++TKFCYYNNY+++QPRH+CK C+RYWT GG +RNVP+G R KNK C+
Sbjct: 40 VLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVPIGGSTRNKNKPCSL 99
Query: 188 Q 188
Q
Sbjct: 100 Q 100
>sp|Q9FGD6|DOF58_ARATH Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana GN=DOF5.8
PE=2 SV=1
Length = 225
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 47/60 (78%)
Query: 130 LPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNCASQY 189
L CPRC S +TKFCYYNNYN +QPRHFCK+C+RYWT GGT+R++PVG RK+ + Y
Sbjct: 32 LSCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSRKSSKRSRTY 91
>sp|Q8LE43|DOF21_ARATH Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana GN=DOF2.1
PE=2 SV=2
Length = 288
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 49/56 (87%)
Query: 132 CPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNCAS 187
CPRC S +TKFCYYNNY+++QPR+FCK+C+RYWT GGT+RNVPVG G R+NK +S
Sbjct: 50 CPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSS 105
>sp|Q9ZPY0|DOF25_ARATH Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana GN=DOF2.5
PE=2 SV=3
Length = 369
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 45/53 (84%)
Query: 125 KPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGA 177
+P + L CPRCNS +TKFCYYNNY++ QPR+FCK C+RYWT GG++RNVPVG
Sbjct: 75 RPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGG 127
>sp|Q9M161|DOF41_ARATH Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana GN=DOF4.1
PE=2 SV=2
Length = 294
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 49/59 (83%)
Query: 125 KPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNK 183
+P + CPRCNS +TKFCYYNNY++ QPR+ CK+C+RYWT GG++RNVPVG G RKNK
Sbjct: 63 RPQEPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNK 121
>sp|Q9SX97|DOF16_ARATH Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana GN=DOF1.6
PE=2 SV=1
Length = 209
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 44/49 (89%)
Query: 130 LPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAG 178
LPCPRCNS TKFCYYNNYN+ QPR++CK+C+RYWT GGT+R+VPVG G
Sbjct: 29 LPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCRRYWTQGGTLRDVPVGGG 77
>sp|Q9SVC5|DOF35_ARATH Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5
PE=3 SV=1
Length = 247
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 45/52 (86%)
Query: 132 CPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNK 183
CPRC S +TKFCYYNNY++ QPR+FCK C+RYWT GG++RNVPVG G RK++
Sbjct: 27 CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSR 78
>sp|P68349|DOF12_ARATH Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2
PE=2 SV=1
Length = 260
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 44/50 (88%)
Query: 132 CPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRK 181
CPRC S +TKFCYYNNY+++QPR+FCK C+RYWT GG++RN+PVG G RK
Sbjct: 40 CPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGGCRK 89
>sp|Q9FM03|DOF56_ARATH Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6
PE=2 SV=2
Length = 372
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 42/49 (85%)
Query: 132 CPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRR 180
CPRC S TKFCYYNNY+++QPR+FCK C+RYWT GGT+RN+PVG G R
Sbjct: 75 CPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCR 123
>sp|Q9SUA9|DOF44_ARATH Dof zinc finger protein DOF4.4 OS=Arabidopsis thaliana GN=DOF4.4
PE=3 SV=1
Length = 210
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%)
Query: 111 NDASNSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTM 170
N +N ++Q LK+P CPRC+S +TKFC+YNNY+ +QPR+FCK C+RYWT GG +
Sbjct: 5 NVFANEDNQVNGLKRPPPSRVCPRCDSDNTKFCFYNNYSESQPRYFCKNCRRYWTHGGAL 64
Query: 171 RNVPVGAGRRK 181
RN+PVG RK
Sbjct: 65 RNIPVGGSCRK 75
>sp|Q9SUB0|DOF43_ARATH Dof zinc finger protein DOF4.3 OS=Arabidopsis thaliana GN=DOF4.3
PE=3 SV=1
Length = 232
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 39/49 (79%)
Query: 132 CPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRR 180
C RC+S +TKFCYYNNY+ QPR+FCK C+RYWT GG +RNVP+G R
Sbjct: 27 CARCDSDNTKFCYYNNYSEFQPRYFCKNCRRYWTHGGALRNVPIGGSSR 75
>sp|O49550|DOF45_ARATH Dof zinc finger protein DOF4.5 OS=Arabidopsis thaliana GN=DOF4.5
PE=3 SV=1
Length = 249
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 38/49 (77%)
Query: 132 CPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRR 180
C RC+S +TKFCYYNNY QPR+FCK C+RYWT GG +RN+P+G R
Sbjct: 27 CARCDSDNTKFCYYNNYCEFQPRYFCKNCRRYWTHGGALRNIPIGGSSR 75
>sp|Q9SUB1|DOF42_ARATH Dof zinc finger protein DOF4.2 OS=Arabidopsis thaliana GN=DOF4.2
PE=3 SV=1
Length = 194
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 132 CPRCNSMDTKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPV 175
CPRC S T+F Y+NN +QPR+ CK C R WT GG +RN+PV
Sbjct: 23 CPRCYSDQTRFSYFNNNKKSQPRYKCKNCCRCWTHGGVLRNIPV 66
>sp|Q9L7Q2|ZMPB_STRPN Zinc metalloprotease ZmpB OS=Streptococcus pneumoniae serotype 4
(strain ATCC BAA-334 / TIGR4) GN=zmpB PE=3 SV=2
Length = 1906
Score = 36.6 bits (83), Expect = 0.47, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 54/144 (37%), Gaps = 20/144 (13%)
Query: 3 QESKDPA----IRLFGKKIAFPSDGEVPVIFSEELPSPAAKEECSIEAEEEKAEEDSSAV 58
Q S PA + G+ +A D + PV E P A EE E K EE +
Sbjct: 267 QPSDKPAEESKVEQAGEPVAPREDEKAPV---EPEKQPEAPEEEKAVEETPKQEESTPDT 323
Query: 59 KAAETTQQDDTT------PPNIDESKIPESPEANVNPKTPSI-------DDETAKSKAAK 105
KA ET + + T P ++ + + E PK +DE A + +
Sbjct: 324 KAEETVEPKEETVNQSIEQPKVETPAVEKQTEPTEEPKVEQAGEPVAPREDEQAPTAPVE 383
Query: 106 SEKSQNDASNSNSQEKTLKKPDKI 129
EK + E+T K DKI
Sbjct: 384 PEKQPEVPEEEKAVEETPKPEDKI 407
Score = 32.0 bits (71), Expect = 9.9, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 52/125 (41%), Gaps = 18/125 (14%)
Query: 20 PSDGEVPVI--FSEELPSPAAKEECSIEAEE---------------EKAEEDSSAVKAAE 62
P+D +P + E+ PA EE E E +K E+S +A E
Sbjct: 224 PTDDTLPKVEEGKEDSAEPAPVEEVGGEVESKPEEKVAVKPESQPSDKPAEESKVEQAGE 283
Query: 63 TTQQDDTTPPNIDESKIPESP-EANVNPKTPSIDDETAKSKAAKSEKSQNDASNSNSQEK 121
+ ++ K PE+P E +TP ++ T +KA ++ + + + N + ++
Sbjct: 284 PVAPREDEKAPVEPEKQPEAPEEEKAVEETPKQEESTPDTKAEETVEPKEETVNQSIEQP 343
Query: 122 TLKKP 126
++ P
Sbjct: 344 KVETP 348
>sp|O62537|HUNB_DROOR Protein hunchback OS=Drosophila orena GN=hb PE=3 SV=1
Length = 767
Score = 36.2 bits (82), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 11/77 (14%)
Query: 118 SQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNI----NQPRHFCKACQRYWTAGGTMRNV 173
+ +T KPDKIL CP+C T+F ++ Y+I NQ C C Y +M N
Sbjct: 259 AHTRTHMKPDKILQCPKC-PFVTEFKHHLEYHIRKHKNQKPFQCDKCS-YTCVNKSMLN- 315
Query: 174 PVGAGRRKNKNCASQYR 190
RK+ + QYR
Sbjct: 316 ----SHRKSHSSVYQYR 328
>sp|P05084|HUNB_DROME Protein hunchback OS=Drosophila melanogaster GN=hb PE=1 SV=2
Length = 758
Score = 36.2 bits (82), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 11/77 (14%)
Query: 118 SQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNI----NQPRHFCKACQRYWTAGGTMRNV 173
+ +T KPDKIL CP+C T+F ++ Y+I NQ C C Y +M N
Sbjct: 257 AHTRTHMKPDKILQCPKC-PFVTEFKHHLEYHIRKHKNQKPFQCDKCS-YTCVNKSMLN- 313
Query: 174 PVGAGRRKNKNCASQYR 190
RK+ + QYR
Sbjct: 314 ----SHRKSHSSVYQYR 326
>sp|O62541|HUNB_DROYA Protein hunchback OS=Drosophila yakuba GN=hb PE=3 SV=1
Length = 759
Score = 36.2 bits (82), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 11/77 (14%)
Query: 118 SQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNI----NQPRHFCKACQRYWTAGGTMRNV 173
+ +T KPDKIL CP+C + T+F ++ Y+I NQ C C Y +M N
Sbjct: 258 AHTRTHMKPDKILQCPKCPFV-TEFKHHLEYHIRKHKNQKPFQCDKCS-YTCVNKSMLN- 314
Query: 174 PVGAGRRKNKNCASQYR 190
RK+ + QYR
Sbjct: 315 ----SHRKSHSSVYQYR 327
>sp|O62538|HUNB_DROSE Protein hunchback OS=Drosophila sechellia GN=hb PE=3 SV=1
Length = 757
Score = 36.2 bits (82), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 11/77 (14%)
Query: 118 SQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNI----NQPRHFCKACQRYWTAGGTMRNV 173
+ +T KPDKIL CP+C T+F ++ Y+I NQ C C Y +M N
Sbjct: 256 AHTRTHMKPDKILQCPKC-PFVTEFKHHLEYHIRKHKNQKPFQCDKCS-YTCVNKSMLN- 312
Query: 174 PVGAGRRKNKNCASQYR 190
RK+ + QYR
Sbjct: 313 ----SHRKSHSSVYQYR 325
>sp|Q9HGI8|ERF3_KLULA Eukaryotic peptide chain release factor GTP-binding subunit
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SUP35
PE=3 SV=1
Length = 700
Score = 33.5 bits (75), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 49 EKAEEDSSAVKAAETTQQDDTTPPNIDESKIPESPEANVNPKTPSIDDETA-KSKAAKSE 107
EK +E A K + ++ + P ID+ KI E+ + TPS DD ++ K+ +AK++
Sbjct: 181 EKTDESKEATKTTDDNEEAQSELPKIDDLKISEAEKPKTKENTPSADDTSSEKTTSAKAD 240
Query: 108 KSQNDASNSNS 118
S A++ ++
Sbjct: 241 TSTGGANSVDA 251
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.128 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 195,875,182
Number of Sequences: 539616
Number of extensions: 9110802
Number of successful extensions: 34091
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 489
Number of HSP's that attempted gapping in prelim test: 31842
Number of HSP's gapped (non-prelim): 2387
length of query: 478
length of database: 191,569,459
effective HSP length: 121
effective length of query: 357
effective length of database: 126,275,923
effective search space: 45080504511
effective search space used: 45080504511
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)