Your job contains 1 sequence.
>011755
MASIRSLSFMVETKADSYVVLFSKNQYRPSSSFSAFRPKKSPIFAFLNNSVSGFSFRSNK
SGHLLKVKHVKATGAGFVEDESGNEPEDSLQATIEKSKKVLAMQKQLLQQISERRKLVSS
IKSDIANSEEDEVSYEERENSFSDLDFTSTSSSNVVENQNGIIPSSSGDHSTANEAPKLQ
SSAANRGPDAGGKESENRLSPEKESIDIDSSKLLKGTDTQSTWSDELPSFLSRTAVISSP
KEERHEKDLDQVQQIDSEPIEPKTEEAKPPPLAGANVMNVILVAAECGPWSKTGGLGDVA
GALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFL
DSPLFRHLGNNIYGGGREDILKRMVLFCKAAIEIPWYVPCGGVCYGDGNLVFIANDWHTA
LLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQICQDITWTFSNCMTLLEVSTSIFLLLD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011755
(478 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2102102 - symbol:SS2 "starch synthase 2" speci... 937 3.8e-94 1
TAIR|locus:2169749 - symbol:SS1 "starch synthase 1" speci... 406 2.1e-37 1
TAIR|locus:2037950 - symbol:GBSS1 "granule bound starch s... 380 1.1e-34 1
UNIPROTKB|Q42968 - symbol:WAXY "Granule-bound starch synt... 350 2.4e-31 1
TIGR_CMR|GSU_1023 - symbol:GSU_1023 "glycogen synthase" s... 219 4.3e-15 1
TIGR_CMR|BA_5120 - symbol:BA_5120 "glycogen synthase" spe... 194 2.5e-12 1
TIGR_CMR|GSU_3257 - symbol:GSU_3257 "glycogen synthase" s... 183 4.3e-11 1
UNIPROTKB|Q9KRB6 - symbol:glgA "Glycogen synthase" specie... 153 9.1e-08 1
TIGR_CMR|VC_1726 - symbol:VC_1726 "glycogen synthase" spe... 153 9.1e-08 1
UNIPROTKB|Q9XHN9 - symbol:Q9XHN9 "Granule bound starch sy... 120 1.2e-06 1
TAIR|locus:2141936 - symbol:SS4 "starch synthase 4" speci... 144 2.8e-05 2
UNIPROTKB|P0A6U8 - symbol:glgA species:83333 "Escherichia... 126 8.4e-05 1
TIGR_CMR|SO_1499 - symbol:SO_1499 "glycogen synthase" spe... 124 0.00016 1
UNIPROTKB|Q4KCP0 - symbol:glgA "Glycogen synthase" specie... 101 0.00049 2
>TAIR|locus:2102102 [details] [associations]
symbol:SS2 "starch synthase 2" species:3702 "Arabidopsis
thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
[GO:0009011 "starch synthase activity" evidence=IMP] [GO:0010021
"amylopectin biosynthetic process" evidence=IMP] [GO:0001666
"response to hypoxia" evidence=RCA] [GO:0010264 "myo-inositol
hexakisphosphate biosynthetic process" evidence=RCA] [GO:0019375
"galactolipid biosynthetic process" evidence=RCA] HAMAP:MF_00484
InterPro:IPR001296 InterPro:IPR011835 Pfam:PF00534
UniPathway:UPA00152 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR CAZy:GT5 InterPro:IPR013534 Pfam:PF08323
EMBL:AC008261 GO:GO:0009501 eggNOG:COG0297 HOGENOM:HOG000294940
KO:K00703 GO:GO:0009011 TIGRFAMs:TIGR02095 GO:GO:0010021
GO:GO:0019252 EMBL:AY054467 EMBL:BT002555 IPI:IPI00531533
RefSeq:NP_186767.1 UniGene:At.18317 ProteinModelPortal:Q9MAC8
SMR:Q9MAC8 IntAct:Q9MAC8 STRING:Q9MAC8 PaxDb:Q9MAC8 PRIDE:Q9MAC8
EnsemblPlants:AT3G01180.1 GeneID:820294 KEGG:ath:AT3G01180
TAIR:At3g01180 InParanoid:Q9MAC8 OMA:ECAPFSK PhylomeDB:Q9MAC8
ProtClustDB:CLSN2684979 Genevestigator:Q9MAC8 Uniprot:Q9MAC8
Length = 792
Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
Identities = 186/288 (64%), Positives = 212/288 (73%)
Query: 164 PSSSGDHSTANEAPKLQSSAANRGPDAGGKESENRLSPEKESIDIDSSKLLKGTDTQSTW 223
P D +T N P SS D K S SPEK S + S + + W
Sbjct: 192 PQKPSDVAT-NGKP--WSSVVASSVDPPYKPSSVMTSPEKTSDPVTSPGKPSKSRAGAFW 248
Query: 224 SDELPSFLSRTAVISSPKEERHEKDLDQVQQIDSEPIEPKTEEAKPPPLAGANVMNVILV 283
SD LPS+L++ S+ K E++ + V SE EP +E KPPPLAGANVMNVILV
Sbjct: 249 SDPLPSYLTKAPQTSTMKTEKYVEKTPDVAS--SETNEPGKDEEKPPPLAGANVMNVILV 306
Query: 284 AAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDI 343
AAEC P+SKTGGLGDVAGALPK+LARRGHRVMVV P Y YAE +D G+RKRY+V QD+
Sbjct: 307 AAECAPFSKTGGLGDVAGALPKSLARRGHRVMVVVPRYAEYAEAKDLGVRKRYKVAGQDM 366
Query: 344 EVAYFQAYIDGVDFVFLDSPLFRHLGNNIYGGGREDILKRMVLFCKAAIEIPWYVPCGGV 403
EV YF A+IDGVDFVF+DSP FRHL NNIYGG R DILKRMVLFCKAA+E+PWYVPCGGV
Sbjct: 367 EVMYFHAFIDGVDFVFIDSPEFRHLSNNIYGGNRLDILKRMVLFCKAAVEVPWYVPCGGV 426
Query: 404 CYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQ 451
CYGDGNL FIANDWHTALLPVYLKAYYRD+G+M+YTRS+LVIHNIAHQ
Sbjct: 427 CYGDGNLAFIANDWHTALLPVYLKAYYRDHGIMKYTRSVLVIHNIAHQ 474
Score = 191 (72.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 75/242 (30%), Positives = 111/242 (45%)
Query: 10 MVETKADSYVVLFS-KNQYRPSSSFSAFRPKKSPIFAFLNNSVSGFSFRSNKSGHLLK-V 67
M S+ +L K Q R +SS R + + S+S F RS GH K V
Sbjct: 1 MASVAESSFPLLCQIKTQRRINSS--TLRHSRVSYHDLPSGSLS-FRSRSFVLGHRCKCV 57
Query: 68 KHVKATGAGFVEDESGNEPEDSLQATIEKSKKVLAMQKQLLQQISERRKLVSSIKSDIAN 127
V+A+G+ +D+ EPED+LQATI+KSKKVLAMQ+ LL QI+ERRKLVSSIK +
Sbjct: 58 SRVEASGS---DDD---EPEDALQATIDKSKKVLAMQRNLLHQIAERRKLVSSIKESTPD 111
Query: 128 XXXXXXXXXXXXXXXXXXXXXXXXXXXVVENQNGII-PSSSGDHSTANE------APKLQ 180
+ + NG + PS+ G S + E +P +
Sbjct: 112 LDDAKASSKQESASSVNANTDATKKEIMDGDANGSVSPSTYGKSSLSKEPEAKTFSPSTE 171
Query: 181 SSAANRGPDAGGKESENRLSPEKESIDIDSSKLLKGTDTQSTWSDELPSFLSRTAVISSP 240
S + A S SP+K S D+ ++ G S + + ++V++SP
Sbjct: 172 SLKNRKQSSASVISSSPVTSPQKPS-DVATN----GKPWSSVVASSVDPPYKPSSVMTSP 226
Query: 241 KE 242
++
Sbjct: 227 EK 228
>TAIR|locus:2169749 [details] [associations]
symbol:SS1 "starch synthase 1" species:3702 "Arabidopsis
thaliana" [GO:0005739 "mitochondrion" evidence=ISM] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0009250 "glucan
biosynthetic process" evidence=IEA] [GO:0016757 "transferase
activity, transferring glycosyl groups" evidence=ISS] [GO:0009011
"starch synthase activity" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0010021 "amylopectin biosynthetic process"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0001666
"response to hypoxia" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0019375 "galactolipid
biosynthetic process" evidence=RCA] [GO:0043085 "positive
regulation of catalytic activity" evidence=RCA] InterPro:IPR001296
InterPro:IPR011835 Pfam:PF00534 UniPathway:UPA00152 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009570 EMBL:AB006701 CAZy:GT5
InterPro:IPR013534 Pfam:PF08323 GO:GO:0009501 eggNOG:COG0297
HOGENOM:HOG000294940 KO:K00703 GO:GO:0009011 TIGRFAMs:TIGR02095
OMA:ADVIMVP GO:GO:0010021 GO:GO:0019252 EMBL:AY128273 EMBL:AK226881
EMBL:AF121673 IPI:IPI00518916 RefSeq:NP_001190378.1
RefSeq:NP_197818.1 UniGene:At.22528 ProteinModelPortal:Q9FNF2
SMR:Q9FNF2 STRING:Q9FNF2 PaxDb:Q9FNF2 PRIDE:Q9FNF2
EnsemblPlants:AT5G24300.1 EnsemblPlants:AT5G24300.2 GeneID:832497
KEGG:ath:AT5G24300 TAIR:At5g24300 InParanoid:Q9FNF2
PhylomeDB:Q9FNF2 ProtClustDB:CLSN2686324 Genevestigator:Q9FNF2
GermOnline:AT5G24300 Uniprot:Q9FNF2
Length = 652
Score = 406 (148.0 bits), Expect = 2.1e-37, P = 2.1e-37
Identities = 100/236 (42%), Positives = 132/236 (55%)
Query: 242 EERHEKDLDQVQQID-SEPIEPKTEEAKPP---PLAGANVMN-VILVAAECGPWSKTGGL 296
EE+ E +DQ+ D P EE P A V+N ++ V +E P+SKTGGL
Sbjct: 102 EEKKEA-IDQIVMADFGVPGNRAVEEGAAEVGIPSGKAEVVNNLVFVTSEAAPYSKTGGL 160
Query: 297 GDVAGALPKALARRGHRVMVVAPHY--G-----NYAEPQDTGIRKRYRVDRQDIEVAYFQ 349
GDV G+LP ALA RGHRVMV++P Y G NYA +D GIR EV+++
Sbjct: 161 GDVCGSLPIALAGRGHRVMVISPRYLNGTAADKNYARAKDLGIRVTVNCFGGSQEVSFYH 220
Query: 350 AYIDGVDFVFLDSPLFRHLGNNIYG---GGREDILKRMVLFCKAAIEIPWYVPCGGVCYG 406
Y DGVD+VF+D + GN YG G D R L C AA E P +P GG YG
Sbjct: 221 EYRDGVDWVFVDHKSYHRPGNP-YGDSKGAFGDNQFRFTLLCHAACEAPLVLPLGGFTYG 279
Query: 407 DGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQICQDITWTFSN 462
+ +L F+ NDWH L+P+ L A YR G+ + RS+L+IHN+AHQ + T++N
Sbjct: 280 EKSL-FLVNDWHAGLVPILLAAKYRPYGVYKDARSILIIHNLAHQGVEPAA-TYTN 333
>TAIR|locus:2037950 [details] [associations]
symbol:GBSS1 "granule bound starch synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0009011 "starch synthase
activity" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0009250 "glucan biosynthetic process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016757 "transferase activity, transferring glycosyl groups"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001666 "response to hypoxia" evidence=RCA] [GO:0010264
"myo-inositol hexakisphosphate biosynthetic process" evidence=RCA]
[GO:0019375 "galactolipid biosynthetic process" evidence=RCA]
InterPro:IPR001296 InterPro:IPR011835 Pfam:PF00534
UniPathway:UPA00152 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009507 CAZy:GT5 InterPro:IPR013534 Pfam:PF08323
EMBL:AC006424 eggNOG:COG0297 HOGENOM:HOG000294940 GO:GO:0009011
TIGRFAMs:TIGR02095 GO:GO:0004373 GO:GO:0019252 EMBL:AY094405
EMBL:AY123983 EMBL:AY149948 EMBL:AY088544 IPI:IPI00520957
PIR:F86453 RefSeq:NP_174566.1 UniGene:At.11953
ProteinModelPortal:Q9MAQ0 SMR:Q9MAQ0 IntAct:Q9MAQ0 STRING:Q9MAQ0
PaxDb:Q9MAQ0 PRIDE:Q9MAQ0 EnsemblPlants:AT1G32900.1 GeneID:840184
KEGG:ath:AT1G32900 TAIR:At1g32900 InParanoid:Q9MAQ0 KO:K13679
OMA:ERYPQNI PhylomeDB:Q9MAQ0 ProtClustDB:CLSN2682839
Genevestigator:Q9MAQ0 GermOnline:AT1G32900 GO:GO:0009568
GO:GO:0033840 Uniprot:Q9MAQ0
Length = 610
Score = 380 (138.8 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 91/222 (40%), Positives = 125/222 (56%)
Query: 249 LDQVQQ-IDSEPIEPKTEE-AKPPPLAGANV----MNVILVAAECGPWSKTGGLGDVAGA 302
+D +Q+ ++P+ K+ + + AG V M+VI + AE GPWSKTGGLGDV G
Sbjct: 49 VDNLQRRSQAKPVSAKSSKRSSKVKTAGKIVCEKGMSVIFIGAEVGPWSKTGGLGDVLGG 108
Query: 303 LPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDS 362
LP ALA RGHRVM + P Y Y + DT + + +V + V +F Y GVD VF+D
Sbjct: 109 LPPALAARGHRVMTICPRYDQYKDAWDTCVVVQIKVGDKVENVRFFHCYKRGVDRVFVDH 168
Query: 363 PLFR-----HLGNNIYGG--GRE--DILKRMVLFCKAAIEIPWYVPCGGVCYGDG----N 409
P+F G+ IYG G + D R L C+AA+E P + Y G +
Sbjct: 169 PIFLAKVVGKTGSKIYGPITGVDYNDNQLRFSLLCQAALEAPQVLNLNSSKYFSGPYGED 228
Query: 410 LVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQ 451
+VF+ANDWHTALLP YLK+ Y+ G+ + + IHNIA+Q
Sbjct: 229 VVFVANDWHTALLPCYLKSMYQSRGVYMNAKVVFCIHNIAYQ 270
>UNIPROTKB|Q42968 [details] [associations]
symbol:WAXY "Granule-bound starch synthase 1,
chloroplastic/amyloplastic" species:4538 "Oryza glaberrima"
[GO:0004373 "glycogen (starch) synthase activity" evidence=ISS]
[GO:0005982 "starch metabolic process" evidence=ISS] [GO:0009501
"amyloplast" evidence=ISS] InterPro:IPR001296 InterPro:IPR011835
Pfam:PF00534 UniPathway:UPA00152 GO:GO:0009507 CAZy:GT5
InterPro:IPR013534 Pfam:PF08323 GO:GO:0009501 GO:GO:0005982
GO:GO:0009011 TIGRFAMs:TIGR02095 GO:GO:0004373 GO:GO:0019252
GO:GO:0033840 EMBL:D10472 ProteinModelPortal:Q42968
EnsemblPlants:ORGLA06G0020500.1 Gramene:Q42968 Uniprot:Q42968
Length = 609
Score = 350 (128.3 bits), Expect = 2.4e-31, P = 2.4e-31
Identities = 82/192 (42%), Positives = 105/192 (54%)
Query: 274 GANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIR 333
GA MNV+ V AE PWSKTGGLGDV G LP A+A GHRVMV++P Y Y + DT +
Sbjct: 80 GAG-MNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVV 138
Query: 334 KRYRV-DRQDIEVAYFQAYIDGVDFVFLDSPLFRH-----LGNNIYGGGR----EDILKR 383
+V DR + V +F Y GVD VF+D P F G IYG +D R
Sbjct: 139 AEIKVADRYE-RVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMR 197
Query: 384 MVLFCKAAIEIPWYVPCGGVCYGDG----NLVFIANDWHTALLPVYLKAYYRDNGLMQYT 439
L C+AA+E P + Y G ++VF+ NDWHT L YLK Y+ NG+ +
Sbjct: 198 FSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNA 257
Query: 440 RSLLVIHNIAHQ 451
+ IHNI++Q
Sbjct: 258 KVAFCIHNISYQ 269
>TIGR_CMR|GSU_1023 [details] [associations]
symbol:GSU_1023 "glycogen synthase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004373 "glycogen (starch)
synthase activity" evidence=ISS] [GO:0005978 "glycogen biosynthetic
process" evidence=ISS] HAMAP:MF_00484 InterPro:IPR001296
InterPro:IPR011835 Pfam:PF00534 UniPathway:UPA00164 GO:GO:0005978
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR013534
Pfam:PF08323 RefSeq:NP_952077.1 ProteinModelPortal:Q74ED9
GeneID:2685960 KEGG:gsu:GSU1023 PATRIC:22024816 eggNOG:COG0297
HOGENOM:HOG000294940 KO:K00703 OMA:IYFIDHE ProtClustDB:CLSK924464
BioCyc:GSUL243231:GH27-1018-MONOMER GO:GO:0009011
TIGRFAMs:TIGR02095 Uniprot:Q74ED9
Length = 501
Score = 219 (82.2 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 62/185 (33%), Positives = 95/185 (51%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
+N+++ A+EC P++K GGL DV G LPK LA GH V VV P Y +P+ G+ +
Sbjct: 4 LNILMAASECVPFAKEGGLADVVGVLPKYLAHMGHDVRVVMPLYSRI-DPERFGLERLPG 62
Query: 338 VDRQDIEVA---Y---FQAYIDG--VDFVFLDSPLFRHLGNNIY---GGGREDILKRMVL 386
V + + Y ++ + G V FL+ + + +Y G D R +
Sbjct: 63 VLVVPMGIMGNQYCGVWEGRLPGSAVPVYFLEHEGY-YGREGLYEEDNVGYMDNDNRFIF 121
Query: 387 FCKAAIEIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIH 446
+AA+E+P + G VF A+DWHTA +PV+L YRD+ L+ S+L +H
Sbjct: 122 LSRAAMELPKLI-------GFAPDVFHAHDWHTAAVPVFLNTLYRDDPLVGGAASVLTVH 174
Query: 447 NIAHQ 451
N+ HQ
Sbjct: 175 NMQHQ 179
>TIGR_CMR|BA_5120 [details] [associations]
symbol:BA_5120 "glycogen synthase" species:198094 "Bacillus
anthracis str. Ames" [GO:0005978 "glycogen biosynthetic process"
evidence=ISS] [GO:0009011 "starch synthase activity" evidence=ISS]
HAMAP:MF_00484 InterPro:IPR001296 InterPro:IPR011835 Pfam:PF00534
UniPathway:UPA00164 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0005978 CAZy:GT5 InterPro:IPR013534
Pfam:PF08323 eggNOG:COG0297 HOGENOM:HOG000294940 KO:K00703
GO:GO:0009011 TIGRFAMs:TIGR02095 RefSeq:NP_847306.1
RefSeq:YP_021773.2 RefSeq:YP_031002.1 ProteinModelPortal:Q81K85
IntAct:Q81K85 DNASU:1084436 EnsemblBacteria:EBBACT00000008312
EnsemblBacteria:EBBACT00000017669 EnsemblBacteria:EBBACT00000022941
GeneID:1084436 GeneID:2819822 GeneID:2849958 KEGG:ban:BA_5120
KEGG:bar:GBAA_5120 KEGG:bat:BAS4758 OMA:ADVIMVP
ProtClustDB:PRK00654 BioCyc:BANT260799:GJAJ-4812-MONOMER
BioCyc:BANT261594:GJ7F-4972-MONOMER Uniprot:Q81K85
Length = 476
Score = 194 (73.4 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 53/179 (29%), Positives = 92/179 (51%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTG--IRKR 335
MN++ +EC P+ K+GGL DVAGALPK L + G V ++ P+Y + G + K
Sbjct: 1 MNILFAVSECVPFVKSGGLADVAGALPKELKKLGVEVRIILPNYSLIPQKLRDGCTLHKV 60
Query: 336 YRVDR--QDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIYGGGREDILKRMVLFCKAAIE 393
V ++ + DG+ + +D+ + +++YG D +R F KA +E
Sbjct: 61 INVPLGWRNQYCGILKGEQDGITYYLIDNEYY-FKRDSLYG--HYDDGERFSYFSKAVLE 117
Query: 394 IPWYVPCGGVCYGDGNL-VFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQ 451
+P + D + V ++DWHTA++ L+ Y+DN L ++ +++ IHN+ Q
Sbjct: 118 C---IP-----HLDFEVDVLHSHDWHTAMVNFLLREKYQDNPLYEHIKTVYTIHNLQFQ 168
>TIGR_CMR|GSU_3257 [details] [associations]
symbol:GSU_3257 "glycogen synthase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004373 "glycogen (starch)
synthase activity" evidence=ISS] [GO:0005978 "glycogen biosynthetic
process" evidence=ISS] HAMAP:MF_00484 InterPro:IPR001296
InterPro:IPR011835 Pfam:PF00534 UniPathway:UPA00164 GO:GO:0005978
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR013534
Pfam:PF08323 eggNOG:COG0297 HOGENOM:HOG000294940 KO:K00703
GO:GO:0009011 TIGRFAMs:TIGR02095 RefSeq:NP_954298.1
ProteinModelPortal:Q747K8 GeneID:2685785 KEGG:gsu:GSU3257
PATRIC:22029355 OMA:DEWNPAA ProtClustDB:CLSK829188
BioCyc:GSUL243231:GH27-3233-MONOMER Uniprot:Q747K8
Length = 484
Score = 183 (69.5 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 55/182 (30%), Positives = 89/182 (48%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRK-RY 336
M V++VA+E P+++TGGL +V ALP AL R GH V V+ P Y A + G+RK R
Sbjct: 1 MKVLMVASEVAPFARTGGLAEVTAALPAALRRMGHDVRVIMPFY-RCAAQTELGVRKARK 59
Query: 337 RVD---RQDIEVAYF-QAYIDGVDFVFLDSPLFRHLGNNIYG---GGREDILKRMVLFCK 389
+ + + QA + V +++ F + +YG G D +R FC+
Sbjct: 60 SAEVSLNGETHKGFLRQAALGDVPVYLVENREF-FSRDYLYGTPEGDYPDNPRRFAFFCR 118
Query: 390 AAIEIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIA 449
+ ++ + D V +DW TAL+P+ L+ D+ T ++ IHN+A
Sbjct: 119 SVLQFLKRMDFRP----D---VIHCHDWQTALIPIILRLEAADDPFFARTATVFTIHNLA 171
Query: 450 HQ 451
+Q
Sbjct: 172 YQ 173
>UNIPROTKB|Q9KRB6 [details] [associations]
symbol:glgA "Glycogen synthase" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0004373 "glycogen
(starch) synthase activity" evidence=ISS] [GO:0005978 "glycogen
biosynthetic process" evidence=ISS] HAMAP:MF_00484
InterPro:IPR001296 InterPro:IPR011835 Pfam:PF00534
UniPathway:UPA00164 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005978 CAZy:GT5 InterPro:IPR013534 Pfam:PF08323
eggNOG:COG0297 KO:K00703 GO:GO:0009011 TIGRFAMs:TIGR02095
ProtClustDB:PRK00654 GO:GO:0004373 PIR:F82165 RefSeq:NP_231362.1
ProteinModelPortal:Q9KRB6 DNASU:2613731 GeneID:2613731
KEGG:vch:VC1726 PATRIC:20082512 OMA:VSATHIT Uniprot:Q9KRB6
Length = 484
Score = 153 (58.9 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 47/173 (27%), Positives = 78/173 (45%)
Query: 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRV 338
NV +E K+GGL DVA ALP+AL +V + P Y + +D + +
Sbjct: 5 NVWFTVSEVQGLVKSGGLADVAKALPQALKALHQQVAIALPAYRSVPGKEDAELVLETEL 64
Query: 339 DR-QDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIYGGGRE---DILKRMVLFCKAAIEI 394
+ + +DGV +D P + +Y + D +R F A +++
Sbjct: 65 THWPHTQYRVLKRDLDGVPIYLIDCPAYFDRPA-LYAENNQAYADNGERFGFFSAACLDV 123
Query: 395 PWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHN 447
+P G+ +++ ANDWHT L+P LK YR + + +S+L +HN
Sbjct: 124 ---LPKLGI---QPDIIH-ANDWHTGLVPFLLKTRYRYDSFFEQVKSVLTVHN 169
>TIGR_CMR|VC_1726 [details] [associations]
symbol:VC_1726 "glycogen synthase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0004373 "glycogen (starch) synthase
activity" evidence=ISS] [GO:0005978 "glycogen biosynthetic process"
evidence=ISS] HAMAP:MF_00484 InterPro:IPR001296 InterPro:IPR011835
Pfam:PF00534 UniPathway:UPA00164 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005978 CAZy:GT5 InterPro:IPR013534
Pfam:PF08323 eggNOG:COG0297 KO:K00703 GO:GO:0009011
TIGRFAMs:TIGR02095 ProtClustDB:PRK00654 GO:GO:0004373 PIR:F82165
RefSeq:NP_231362.1 ProteinModelPortal:Q9KRB6 DNASU:2613731
GeneID:2613731 KEGG:vch:VC1726 PATRIC:20082512 OMA:VSATHIT
Uniprot:Q9KRB6
Length = 484
Score = 153 (58.9 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 47/173 (27%), Positives = 78/173 (45%)
Query: 279 NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRV 338
NV +E K+GGL DVA ALP+AL +V + P Y + +D + +
Sbjct: 5 NVWFTVSEVQGLVKSGGLADVAKALPQALKALHQQVAIALPAYRSVPGKEDAELVLETEL 64
Query: 339 DR-QDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIYGGGRE---DILKRMVLFCKAAIEI 394
+ + +DGV +D P + +Y + D +R F A +++
Sbjct: 65 THWPHTQYRVLKRDLDGVPIYLIDCPAYFDRPA-LYAENNQAYADNGERFGFFSAACLDV 123
Query: 395 PWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHN 447
+P G+ +++ ANDWHT L+P LK YR + + +S+L +HN
Sbjct: 124 ---LPKLGI---QPDIIH-ANDWHTGLVPFLLKTRYRYDSFFEQVKSVLTVHN 169
>UNIPROTKB|Q9XHN9 [details] [associations]
symbol:Q9XHN9 "Granule bound starch synthase" species:39947
"Oryza sativa Japonica Group" [GO:0005982 "starch metabolic
process" evidence=IEP] GO:GO:0009507 CAZy:GT5 InterPro:IPR013534
Pfam:PF08323 GO:GO:0005982 EMBL:AF092444 STRING:Q9XHN9
Gramene:Q9XHN9 Uniprot:Q9XHN9
Length = 113
Score = 120 (47.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 24/35 (68%), Positives = 26/35 (74%)
Query: 274 GANVMNVILVAAECGPWSKTGGLGDVAGALPKALA 308
GA MNV+ V AE PWSKTGGLGDV G LP A+A
Sbjct: 80 GAG-MNVVFVGAEMAPWSKTGGLGDVLGGLPPAMA 113
>TAIR|locus:2141936 [details] [associations]
symbol:SS4 "starch synthase 4" species:3702 "Arabidopsis
thaliana" [GO:0009011 "starch synthase activity" evidence=IEA]
[GO:0009058 "biosynthetic process" evidence=IEA] [GO:0009250
"glucan biosynthetic process" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016757 "transferase activity,
transferring glycosyl groups" evidence=ISS] [GO:0005982 "starch
metabolic process" evidence=RCA;IMP] [GO:0000272 "polysaccharide
catabolic process" evidence=RCA] [GO:0001666 "response to hypoxia"
evidence=RCA] [GO:0009664 "plant-type cell wall organization"
evidence=RCA] [GO:0019252 "starch biosynthetic process"
evidence=RCA] [GO:0019375 "galactolipid biosynthetic process"
evidence=RCA] HAMAP:MF_00484 InterPro:IPR001296 InterPro:IPR011835
Pfam:PF00534 UniPathway:UPA00152 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR InterPro:IPR013534 Pfam:PF08323
EMBL:AL161548 GO:GO:0009501 GO:GO:0005982 GO:GO:0009011
TIGRFAMs:TIGR02095 GO:GO:0019252 EMBL:AL021713 EMBL:AK226610
IPI:IPI00524471 PIR:T04926 RefSeq:NP_193558.3 UniGene:At.46236
ProteinModelPortal:Q0WVX5 STRING:Q0WVX5 PRIDE:Q0WVX5
EnsemblPlants:AT4G18240.1 GeneID:827550 KEGG:ath:AT4G18240
TAIR:At4g18240 InParanoid:Q0WVX5 OMA:LVGCITR PhylomeDB:Q0WVX5
ProtClustDB:PLN02939 Genevestigator:Q0WVX5 Uniprot:Q0WVX5
Length = 1040
Score = 144 (55.7 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 59/222 (26%), Positives = 98/222 (44%)
Query: 241 KEER-HEKDLDQVQQIDSEPIEPKTEEAKPPPLAGANVMNVILVAAECGPWSKTGGLGDV 299
K+ R H+ +D + + + I + P +G + V+ +AAE P +K GGLGDV
Sbjct: 507 KDRRIHDTYIDVKDKNERDAISAFLKLVSSPTSSG---LYVVHIAAEMAPVAKVGGLGDV 563
Query: 300 AGALPKALARRGHRVMVVAPHYG--NYAEPQDTG----IRKRYRVDRQDIEVAYFQAYID 353
L KAL R+GH V ++ P Y Y +D + + Y D + + + ++
Sbjct: 564 VAGLGKALQRKGHLVEIILPKYDCMQYDRVRDLRALDTVVESY-FDGKLYKNKIWIGTVE 622
Query: 354 GVDFVFLDSPLFRHLGNNIYGG---GREDILKRMVLFCKAAIEIPWYVPCGGVCYGDGNL 410
G+ F++ P +H + G G +D +R F +AA+E+ + G
Sbjct: 623 GLPVHFIE-P--QHPSKFFWRGQFYGEQDDFRRFSYFSRAALELL-------LQSGKKPD 672
Query: 411 VFIANDWHTALL-PVYLKAYYRDNGLMQYTRSLLVIHNIAHQ 451
+ +DW TA + P+Y Y GL R HN +Q
Sbjct: 673 IIHCHDWQTAFVAPLYWDLY-APKGL-DSARICFTCHNFEYQ 712
Score = 37 (18.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 88 DSLQATIEKSKKVLAMQKQLLQQISERRKLVSSIKSDI 125
++LQ ++++ K +LQQ + R V I+ +
Sbjct: 359 ETLQLLLDRATKQAEQAVIVLQQNQDLRNKVDKIEESL 396
Score = 37 (18.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 22/106 (20%), Positives = 50/106 (47%)
Query: 2 ASIRSLSFMVE--TK-ADSYVVLFSKNQ-YRPSSSFSAFRPKKSPIFAFLNNSVSGFSFR 57
A + +L +++ TK A+ V++ +NQ R K++ ++ + + ++
Sbjct: 356 AKVETLQLLLDRATKQAEQAVIVLQQNQDLRNKVDKIEESLKEANVYKESSEKIQQYNEL 415
Query: 58 SNKSGHLLKVKHVKATGA--GFVE--DESGNEPEDSLQATIEKSKK 99
LL+ + K+ +V+ ES E +++L++ E+SKK
Sbjct: 416 MQHKVTLLEERLEKSDAEIFSYVQLYQESIKEFQETLESLKEESKK 461
>UNIPROTKB|P0A6U8 [details] [associations]
symbol:glgA species:83333 "Escherichia coli K-12"
[GO:0006974 "response to DNA damage stimulus" evidence=IEP]
[GO:0009011 "starch synthase activity" evidence=IEA;IDA]
[GO:0005978 "glycogen biosynthetic process" evidence=IEA;IMP]
HAMAP:MF_00484 InterPro:IPR001296 InterPro:IPR011835 Pfam:PF00534
UniPathway:UPA00164 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR EMBL:U18997
GO:GO:0005978 GO:GO:0006974 InterPro:IPR013534 Pfam:PF08323
eggNOG:COG0297 KO:K00703 GO:GO:0009011 TIGRFAMs:TIGR02095
OMA:ADVIMVP ProtClustDB:PRK00654 EMBL:V00281 EMBL:J02616
EMBL:J01616 PIR:H65138 RefSeq:NP_417887.1 RefSeq:YP_492004.1
PDB:2QZS PDB:2R4T PDB:2R4U PDB:3COP PDB:3CX4 PDB:3D1J PDB:3GUH
PDBsum:2QZS PDBsum:2R4T PDBsum:2R4U PDBsum:3COP PDBsum:3CX4
PDBsum:3D1J PDBsum:3GUH ProteinModelPortal:P0A6U8 SMR:P0A6U8
IntAct:P0A6U8 PRIDE:P0A6U8 EnsemblBacteria:EBESCT00000004694
EnsemblBacteria:EBESCT00000004695 EnsemblBacteria:EBESCT00000004696
EnsemblBacteria:EBESCT00000016997 GeneID:12933507 GeneID:947932
KEGG:ecj:Y75_p3748 KEGG:eco:b3429 PATRIC:32122298 EchoBASE:EB0372
EcoGene:EG10377 HOGENOM:HOG000294941
BioCyc:EcoCyc:GLYCOGENSYN-MONOMER BioCyc:ECOL316407:JW3392-MONOMER
BioCyc:MetaCyc:GLYCOGENSYN-MONOMER EvolutionaryTrace:P0A6U8
Genevestigator:P0A6U8 Uniprot:P0A6U8
Length = 477
Score = 126 (49.4 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 51/181 (28%), Positives = 77/181 (42%)
Query: 278 MNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
M V+ V +E P KTGGL DV GALP A G V+ P + + G+
Sbjct: 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRR----GVTDAQV 56
Query: 338 VDRQDI---EVAYFQAYIDGVDFVFLDSP-LFRHLGNNIYGGGR---EDILKRMVLFCKA 390
V R+D + + +GV +D+P L+ G+ + D + R L
Sbjct: 57 VSRRDTFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWV 116
Query: 391 AIEIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAH 450
E+ G + ++V A+DWH L P YL A R +S+ +HN+A+
Sbjct: 117 GAEMA----SGLDPFWRPDVVH-AHDWHAGLAPAYLAARGRP------AKSVFTVHNLAY 165
Query: 451 Q 451
Q
Sbjct: 166 Q 166
>TIGR_CMR|SO_1499 [details] [associations]
symbol:SO_1499 "glycogen synthase" species:211586
"Shewanella oneidensis MR-1" [GO:0004373 "glycogen (starch)
synthase activity" evidence=ISS] [GO:0005978 "glycogen biosynthetic
process" evidence=ISS] InterPro:IPR001296 Pfam:PF00534
GO:GO:0009058 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR013534 Pfam:PF08323 HOGENOM:HOG000294940 KO:K00703
GO:GO:0009011 RefSeq:NP_717116.1 ProteinModelPortal:Q8EGU2
GeneID:1169309 KEGG:son:SO_1499 PATRIC:23522640 OMA:TKFAFLC
ProtClustDB:CLSK906292 Uniprot:Q8EGU2
Length = 534
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 49/181 (27%), Positives = 82/181 (45%)
Query: 280 VILVAAECGPW--SKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYR 337
+++VAAE G +K GG+ DV LP+ALA G + V+ P YG + Q +
Sbjct: 4 ILMVAAENGALKGAKVGGMADVIRDLPQALAGVGIQADVIMPSYG-FLTAQGAKQIGEFD 62
Query: 338 VD---RQDIEVAYFQAY--IDGVDFVFLDSPLFRHLGNNIYGGGRED--ILKRMVLFCKA 390
V R ++ Y+ A+ + G + L+ L++ + IY G +D F
Sbjct: 63 VSFAGRHELIKLYWLAHPLVPGANIYLLEHGLWQSIPGQIYSQGTKDRPFADDATKFAFL 122
Query: 391 AIEIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAH 450
+ + + G V L+ + +DWHT L + L+A + +Q + IHN+A
Sbjct: 123 CVSVAKALVTGLVPMPQ--LLHL-HDWHTGCLAM-LRALAPEYQALQAIECVFSIHNLAL 178
Query: 451 Q 451
Q
Sbjct: 179 Q 179
>UNIPROTKB|Q4KCP0 [details] [associations]
symbol:glgA "Glycogen synthase" species:220664 "Pseudomonas
protegens Pf-5" [GO:0004373 "glycogen (starch) synthase activity"
evidence=ISS] [GO:0005978 "glycogen biosynthetic process"
evidence=ISS] HAMAP:MF_00484 InterPro:IPR001296 InterPro:IPR011835
Pfam:PF00534 UniPathway:UPA00164 GO:GO:0005978 EMBL:CP000076
GenomeReviews:CP000076_GR CAZy:GT5 InterPro:IPR013534 Pfam:PF08323
eggNOG:COG0297 KO:K00703 GO:GO:0009011 TIGRFAMs:TIGR02095
ProtClustDB:PRK00654 HOGENOM:HOG000294941 RefSeq:YP_259993.2
STRING:Q4KCP0 GeneID:3477958 KEGG:pfl:PFL_2887 PATRIC:19875075
BioCyc:PFLU220664:GIX8-2901-MONOMER GO:GO:0004373 Uniprot:Q4KCP0
Length = 522
Score = 101 (40.6 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 26/65 (40%), Positives = 34/65 (52%)
Query: 257 SEPIEPKTEEAKPPPLAGANVMNVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMV 316
S P+ P + P N V+ V +E KTGGLGDV+ ALP+A+A H V V
Sbjct: 24 SVPV-PGNKTVLPLARPNPNRKRVLFVTSEIADLVKTGGLGDVSAALPRAMAHL-HDVRV 81
Query: 317 VAPHY 321
+ P Y
Sbjct: 82 LIPGY 86
Score = 63 (27.2 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 414 ANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQ 451
A+DW L P Y+ ++R Q T +L IHN+A+Q
Sbjct: 181 AHDWPAGLAPAYM--HWRG----QRTPTLFTIHNLAYQ 212
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 478 451 0.00092 118 3 11 22 0.42 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 615 (65 KB)
Total size of DFA: 271 KB (2144 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 43.58u 0.19s 43.77t Elapsed: 00:00:02
Total cpu time: 43.58u 0.19s 43.77t Elapsed: 00:00:02
Start: Sat May 11 11:21:12 2013 End: Sat May 11 11:21:14 2013