Query 011756
Match_columns 478
No_of_seqs 163 out of 2092
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 04:53:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011756.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011756hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0253 Synaptic vesicle trans 100.0 7.3E-56 1.6E-60 406.1 33.8 444 7-461 58-527 (528)
2 TIGR01299 synapt_SV2 synaptic 100.0 7E-47 1.5E-51 395.7 43.2 451 8-461 148-741 (742)
3 TIGR00887 2A0109 phosphate:H+ 100.0 6.4E-44 1.4E-48 367.2 39.5 427 14-466 3-501 (502)
4 KOG0569 Permease of the major 100.0 5.4E-39 1.2E-43 316.8 36.0 413 21-471 5-472 (485)
5 TIGR00898 2A0119 cation transp 100.0 3E-38 6.4E-43 326.0 29.9 407 12-464 73-505 (505)
6 KOG0252 Inorganic phosphate tr 100.0 1.1E-38 2.3E-43 302.2 17.6 423 20-471 34-515 (538)
7 PRK10642 proline/glycine betai 100.0 5.3E-34 1.1E-38 292.6 40.9 381 26-463 15-439 (490)
8 PRK10077 xylE D-xylose transpo 100.0 8.9E-34 1.9E-38 290.8 37.8 406 22-467 7-471 (479)
9 KOG0254 Predicted transporter 100.0 1.1E-33 2.5E-38 291.3 35.1 411 23-469 41-499 (513)
10 PF00083 Sugar_tr: Sugar (and 100.0 1.8E-40 3.9E-45 337.7 -18.9 399 32-467 5-450 (451)
11 KOG0255 Synaptic vesicle trans 100.0 4.5E-32 9.9E-37 280.7 33.8 370 62-470 118-509 (521)
12 PRK10406 alpha-ketoglutarate t 100.0 2.6E-30 5.5E-35 261.3 40.6 369 21-461 16-430 (432)
13 PRK09952 shikimate transporter 100.0 8.6E-30 1.9E-34 257.7 41.4 368 23-456 18-435 (438)
14 TIGR00879 SP MFS transporter, 100.0 3E-30 6.5E-35 263.8 33.2 414 23-463 24-480 (481)
15 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.3E-29 2.9E-34 254.3 36.1 374 22-438 3-406 (412)
16 COG2271 UhpC Sugar phosphate p 100.0 1.5E-30 3.4E-35 246.0 26.5 380 21-451 23-432 (448)
17 PRK12307 putative sialic acid 100.0 6E-29 1.3E-33 251.1 39.0 382 21-458 12-414 (426)
18 PRK11551 putative 3-hydroxyphe 100.0 2.6E-28 5.7E-33 244.9 40.2 366 22-452 10-395 (406)
19 TIGR00903 2A0129 major facilit 100.0 2.6E-28 5.5E-33 240.4 35.3 335 43-451 7-363 (368)
20 TIGR00891 2A0112 putative sial 100.0 4.7E-28 1E-32 242.5 36.3 366 21-430 6-392 (405)
21 PRK09556 uhpT sugar phosphate 100.0 2.3E-28 5E-33 249.5 31.5 403 5-457 7-454 (467)
22 TIGR00895 2A0115 benzoate tran 100.0 4.6E-27 1E-31 234.6 39.0 377 12-425 2-397 (398)
23 PRK15075 citrate-proton sympor 100.0 6.1E-27 1.3E-31 236.9 40.2 370 23-462 11-428 (434)
24 PRK11663 regulatory protein Uh 100.0 7.8E-27 1.7E-31 236.0 36.7 388 22-460 18-431 (434)
25 PRK03893 putative sialic acid 100.0 7.5E-26 1.6E-30 233.1 37.0 408 22-455 15-456 (496)
26 PRK11273 glpT sn-glycerol-3-ph 99.9 1.4E-24 3.1E-29 220.7 37.3 403 10-467 13-448 (452)
27 TIGR00893 2A0114 d-galactonate 99.9 4.5E-25 9.8E-30 219.6 32.3 367 36-450 3-396 (399)
28 TIGR00894 2A0114euk Na(+)-depe 99.9 1.1E-24 2.5E-29 222.4 33.2 378 21-451 13-448 (465)
29 PRK03545 putative arabinose tr 99.9 1.2E-23 2.5E-28 210.0 39.5 353 25-453 7-380 (390)
30 PRK03699 putative transporter; 99.9 5.4E-24 1.2E-28 212.7 36.5 358 22-451 2-378 (394)
31 PLN00028 nitrate transmembrane 99.9 4.1E-24 8.9E-29 218.3 35.7 379 10-452 19-432 (476)
32 COG2814 AraJ Arabinose efflux 99.9 2.9E-23 6.2E-28 199.5 37.6 357 23-452 9-385 (394)
33 PRK09705 cynX putative cyanate 99.9 4.2E-23 9.2E-28 206.0 37.1 342 44-462 26-390 (393)
34 TIGR00890 2A0111 Oxalate/Forma 99.9 4.5E-23 9.7E-28 204.1 32.0 336 41-445 17-374 (377)
35 PRK10489 enterobactin exporter 99.9 2.2E-22 4.8E-27 202.6 34.9 366 37-469 27-415 (417)
36 TIGR00712 glpT glycerol-3-phos 99.9 2.3E-22 4.9E-27 203.8 35.1 383 24-457 24-437 (438)
37 TIGR00711 efflux_EmrB drug res 99.9 5.6E-23 1.2E-27 211.1 30.9 377 28-428 3-410 (485)
38 PRK05122 major facilitator sup 99.9 1.1E-21 2.3E-26 196.5 39.1 350 34-463 22-398 (399)
39 PRK14995 methyl viologen resis 99.9 9.3E-22 2E-26 202.2 38.6 379 25-427 4-412 (495)
40 TIGR00883 2A0106 metabolite-pr 99.9 4.3E-22 9.3E-27 198.3 33.3 330 36-430 2-377 (394)
41 PRK10504 putative transporter; 99.9 1.1E-20 2.3E-25 193.5 41.5 376 29-429 12-416 (471)
42 TIGR00881 2A0104 phosphoglycer 99.9 2.3E-22 4.9E-27 199.2 28.1 347 34-430 2-374 (379)
43 PRK10213 nepI ribonucleoside t 99.9 4.5E-20 9.9E-25 184.1 40.8 166 22-187 15-199 (394)
44 PRK12382 putative transporter; 99.9 2E-20 4.4E-25 186.8 36.3 340 34-452 22-388 (392)
45 TIGR00899 2A0120 sugar efflux 99.9 4.5E-20 9.8E-25 182.9 38.4 341 37-451 7-372 (375)
46 cd06174 MFS The Major Facilita 99.9 2.8E-20 6E-25 182.1 36.3 328 31-450 3-349 (352)
47 PRK15034 nitrate/nitrite trans 99.9 4.4E-20 9.5E-25 183.8 37.4 351 26-453 33-454 (462)
48 PRK10091 MFS transport protein 99.9 4.1E-20 8.8E-25 183.9 37.0 344 33-452 9-375 (382)
49 TIGR00892 2A0113 monocarboxyla 99.9 8.4E-21 1.8E-25 192.9 30.7 377 22-447 14-415 (455)
50 TIGR00710 efflux_Bcr_CflA drug 99.9 2.7E-19 5.8E-24 178.0 40.8 151 37-187 15-184 (385)
51 KOG2533 Permease of the major 99.9 2.6E-21 5.7E-26 194.1 25.9 352 23-425 41-427 (495)
52 TIGR00900 2A0121 H+ Antiporter 99.9 4.9E-20 1.1E-24 181.6 34.6 330 35-428 7-363 (365)
53 PRK15402 multidrug efflux syst 99.9 2.8E-19 6.1E-24 179.4 40.4 167 22-188 8-193 (406)
54 PF07690 MFS_1: Major Facilita 99.9 1.5E-20 3.3E-25 184.4 30.6 325 34-419 3-352 (352)
55 TIGR00897 2A0118 polyol permea 99.9 1E-18 2.2E-23 175.1 40.4 365 16-452 6-400 (402)
56 PRK09874 drug efflux system pr 99.9 4.7E-19 1E-23 177.8 37.0 352 34-452 21-397 (408)
57 PRK11010 ampG muropeptide tran 99.9 1.4E-18 3.1E-23 177.9 40.9 351 36-453 21-403 (491)
58 PRK15011 sugar efflux transpor 99.9 1.3E-18 2.8E-23 173.8 39.3 347 36-456 24-393 (393)
59 PRK11043 putative transporter; 99.9 3.5E-18 7.5E-23 171.2 40.8 310 45-428 24-357 (401)
60 PRK10473 multidrug efflux syst 99.9 2.7E-18 6E-23 171.4 39.9 141 47-187 23-182 (392)
61 PRK03633 putative MFS family t 99.9 3.2E-18 6.9E-23 170.3 37.9 336 32-446 11-365 (381)
62 KOG1330 Sugar transporter/spin 99.9 2.3E-21 5E-26 185.7 14.4 167 22-188 28-214 (493)
63 COG2223 NarK Nitrate/nitrite t 99.9 7E-19 1.5E-23 167.5 30.7 359 23-452 10-400 (417)
64 TIGR00886 2A0108 nitrite extru 99.9 2.3E-19 4.9E-24 177.4 28.4 158 31-188 5-193 (366)
65 PRK10133 L-fucose transporter; 99.9 6.7E-18 1.4E-22 170.6 38.7 345 22-437 21-417 (438)
66 PRK11102 bicyclomycin/multidru 99.9 7E-18 1.5E-22 167.5 37.0 141 47-187 11-170 (377)
67 PRK11195 lysophospholipid tran 99.9 7.4E-18 1.6E-22 168.2 36.9 351 34-453 10-380 (393)
68 KOG2532 Permease of the major 99.9 3.3E-19 7.1E-24 178.6 27.1 345 54-452 65-446 (466)
69 TIGR00885 fucP L-fucose:H+ sym 99.8 1.1E-17 2.4E-22 167.5 37.0 325 31-428 7-381 (410)
70 PRK15403 multidrug efflux syst 99.8 2.8E-17 6E-22 165.1 38.7 159 30-188 19-196 (413)
71 PRK11652 emrD multidrug resist 99.8 1.4E-16 3E-21 159.2 41.4 162 27-188 8-188 (394)
72 TIGR00901 2A0125 AmpG-related 99.8 1E-17 2.2E-22 165.1 30.0 305 44-412 5-355 (356)
73 PRK11646 multidrug resistance 99.8 2.6E-16 5.6E-21 157.4 36.6 139 46-185 30-187 (400)
74 TIGR00889 2A0110 nucleoside tr 99.8 3.5E-16 7.6E-21 157.3 36.6 351 45-460 21-409 (418)
75 TIGR00902 2A0127 phenyl propri 99.8 7.4E-16 1.6E-20 153.3 38.1 342 34-448 11-374 (382)
76 PRK08633 2-acyl-glycerophospho 99.8 2.9E-16 6.2E-21 178.0 39.4 355 39-455 22-412 (1146)
77 PRK11902 ampG muropeptide tran 99.8 9E-16 1.9E-20 153.8 38.1 153 36-188 8-186 (402)
78 PRK10054 putative transporter; 99.8 3.5E-16 7.6E-21 156.2 34.8 329 46-445 27-376 (395)
79 TIGR00896 CynX cyanate transpo 99.8 1.3E-16 2.7E-21 157.2 29.9 310 45-430 18-350 (355)
80 PRK06814 acylglycerophosphoeth 99.8 1.3E-15 2.8E-20 172.3 36.1 337 28-427 16-395 (1140)
81 TIGR00792 gph sugar (Glycoside 99.8 1.8E-15 3.9E-20 153.4 32.6 322 41-429 14-381 (437)
82 PRK11128 putative 3-phenylprop 99.8 1.1E-14 2.5E-19 144.8 37.2 330 44-446 21-372 (382)
83 TIGR00806 rfc RFC reduced fola 99.7 9E-16 1.9E-20 150.4 26.2 163 23-188 24-207 (511)
84 PRK09528 lacY galactoside perm 99.7 6.6E-15 1.4E-19 148.4 32.7 133 322-454 271-404 (420)
85 PTZ00207 hypothetical protein; 99.7 1.2E-14 2.6E-19 149.0 32.1 180 23-205 24-229 (591)
86 KOG2504 Monocarboxylate transp 99.7 1.3E-15 2.9E-20 154.6 23.6 406 22-452 41-475 (509)
87 TIGR00805 oat sodium-independe 99.7 1E-15 2.2E-20 160.8 21.7 157 30-186 36-283 (633)
88 TIGR00882 2A0105 oligosacchari 99.7 2E-13 4.2E-18 136.6 35.6 339 50-451 26-393 (396)
89 PF06609 TRI12: Fungal trichot 99.7 3.4E-13 7.4E-18 137.5 35.4 375 31-424 48-463 (599)
90 TIGR02718 sider_RhtX_FptX side 99.7 1.4E-12 3.1E-17 130.1 37.7 347 30-446 4-384 (390)
91 PRK09584 tppB putative tripept 99.6 1.6E-12 3.4E-17 133.6 34.9 167 3-175 3-192 (500)
92 PRK10207 dipeptide/tripeptide 99.6 2.5E-12 5.5E-17 131.5 35.1 143 29-171 16-181 (489)
93 TIGR00924 yjdL_sub1_fam amino 99.6 1E-11 2.2E-16 126.9 38.5 143 34-176 17-184 (475)
94 COG0738 FucP Fucose permease [ 99.6 6.9E-12 1.5E-16 119.3 32.3 329 36-436 22-392 (422)
95 TIGR00788 fbt folate/biopterin 99.6 6E-13 1.3E-17 135.6 25.3 351 28-430 27-415 (468)
96 PF05977 MFS_3: Transmembrane 99.6 3.2E-11 6.9E-16 123.4 36.6 291 96-451 101-392 (524)
97 TIGR01272 gluP glucose/galacto 99.6 7.3E-12 1.6E-16 120.5 28.8 274 94-436 6-298 (310)
98 COG2807 CynX Cyanate permease 99.5 2.8E-11 6E-16 113.5 29.7 332 44-452 29-384 (395)
99 PF11700 ATG22: Vacuole efflux 99.5 2.2E-10 4.9E-15 115.9 35.8 146 314-460 318-474 (477)
100 PRK10642 proline/glycine betai 99.5 3.4E-12 7.4E-17 131.2 21.5 158 49-207 272-458 (490)
101 KOG2615 Permease of the major 99.5 3.8E-11 8.2E-16 113.0 25.0 129 60-188 66-218 (451)
102 PRK09669 putative symporter Ya 99.5 2.5E-10 5.5E-15 115.9 32.2 312 47-429 30-389 (444)
103 TIGR01301 GPH_sucrose GPH fami 99.4 2.6E-09 5.6E-14 107.7 36.1 364 46-458 24-476 (477)
104 PF03825 Nuc_H_symport: Nucleo 99.4 1.4E-08 3.1E-13 100.9 38.7 111 320-430 250-366 (400)
105 KOG3764 Vesicular amine transp 99.3 1.1E-10 2.3E-15 110.6 17.5 130 56-185 100-248 (464)
106 PF13347 MFS_2: MFS/sugar tran 99.3 4.6E-09 1E-13 106.2 29.7 313 47-428 22-384 (428)
107 PRK11462 putative transporter; 99.3 1.8E-08 3.8E-13 102.7 33.0 126 53-178 36-198 (460)
108 PLN00028 nitrate transmembrane 99.2 2.4E-09 5.3E-14 109.6 23.5 180 265-456 34-222 (476)
109 PRK10429 melibiose:sodium symp 99.2 4.2E-08 9.1E-13 100.5 31.8 107 322-428 275-393 (473)
110 PF01306 LacY_symp: LacY proto 99.2 2.1E-07 4.6E-12 91.3 33.0 141 320-460 266-407 (412)
111 TIGR00880 2_A_01_02 Multidrug 99.2 1E-09 2.2E-14 91.9 14.7 133 324-456 9-141 (141)
112 KOG4686 Predicted sugar transp 99.2 2.5E-09 5.5E-14 96.7 17.3 102 326-430 313-416 (459)
113 PRK09848 glucuronide transport 99.2 1.7E-07 3.6E-12 95.4 33.0 105 324-428 275-388 (448)
114 TIGR02332 HpaX 4-hydroxyphenyl 99.1 7.3E-09 1.6E-13 104.1 20.8 139 320-458 50-194 (412)
115 COG2270 Permeases of the major 99.1 1.4E-07 3.1E-12 90.9 28.1 146 313-459 288-434 (438)
116 TIGR00710 efflux_Bcr_CflA drug 99.1 4.5E-09 9.8E-14 104.4 19.0 141 319-459 46-186 (385)
117 PRK10213 nepI ribonucleoside t 99.1 1.2E-08 2.7E-13 101.9 21.3 137 321-457 63-199 (394)
118 PRK10054 putative transporter; 99.1 5.8E-09 1.3E-13 104.3 18.8 136 321-457 51-186 (395)
119 TIGR00895 2A0115 benzoate tran 99.1 3.4E-09 7.4E-14 105.6 16.8 138 320-457 59-196 (398)
120 PRK11551 putative 3-hydroxyphe 99.1 7.7E-09 1.7E-13 103.7 19.4 139 319-457 56-194 (406)
121 PRK15462 dipeptide/tripeptide 99.1 7.8E-09 1.7E-13 104.7 19.2 167 271-448 13-184 (493)
122 PRK15462 dipeptide/tripeptide 99.1 1.5E-06 3.2E-11 88.3 34.8 140 34-173 16-178 (493)
123 PRK10473 multidrug efflux syst 99.1 9.1E-09 2E-13 102.7 18.6 140 320-459 45-184 (392)
124 PRK10504 putative transporter; 99.1 1.6E-08 3.4E-13 103.7 20.8 180 267-457 10-189 (471)
125 TIGR01299 synapt_SV2 synaptic 99.1 1.5E-08 3.2E-13 107.6 20.9 107 320-426 209-315 (742)
126 PF07690 MFS_1: Major Facilita 99.1 1.9E-08 4.1E-13 98.4 20.5 138 320-457 39-176 (352)
127 TIGR00893 2A0114 d-galactonate 99.0 5.3E-09 1.1E-13 103.8 16.1 139 320-458 36-174 (399)
128 PRK15402 multidrug efflux syst 99.0 1.4E-08 3.1E-13 101.8 19.3 139 320-458 55-193 (406)
129 PRK03893 putative sialic acid 99.0 2.6E-08 5.6E-13 102.7 20.9 164 263-437 16-179 (496)
130 TIGR00891 2A0112 putative sial 99.0 2.5E-08 5.5E-13 99.6 20.3 137 320-457 54-192 (405)
131 PRK15403 multidrug efflux syst 99.0 2.1E-08 4.5E-13 100.9 19.4 138 321-458 59-196 (413)
132 PRK03545 putative arabinose tr 99.0 4.1E-08 8.8E-13 98.0 20.5 137 321-457 52-188 (390)
133 PRK12307 putative sialic acid 99.0 3.2E-08 6.9E-13 100.0 19.9 118 320-437 60-177 (426)
134 KOG2563 Permease of the major 99.0 7.9E-08 1.7E-12 93.1 21.2 378 21-463 39-460 (480)
135 PRK11663 regulatory protein Uh 99.0 2.7E-08 5.8E-13 100.8 19.3 137 320-456 65-201 (434)
136 TIGR00711 efflux_EmrB drug res 99.0 1.7E-08 3.6E-13 103.8 17.7 139 320-458 44-182 (485)
137 COG2211 MelB Na+/melibiose sym 99.0 7E-07 1.5E-11 88.7 27.9 286 78-429 86-397 (467)
138 TIGR00900 2A0121 H+ Antiporter 99.0 6.1E-08 1.3E-12 95.3 20.6 132 320-451 41-177 (365)
139 PRK03699 putative transporter; 99.0 8.3E-08 1.8E-12 95.9 21.7 128 321-448 50-178 (394)
140 PRK11102 bicyclomycin/multidru 99.0 2.3E-08 5E-13 99.1 16.4 138 320-457 33-170 (377)
141 PRK11652 emrD multidrug resist 98.9 8.2E-08 1.8E-12 95.9 20.1 139 320-458 50-188 (394)
142 PRK14995 methyl viologen resis 98.9 1.2E-07 2.7E-12 97.6 21.2 136 323-458 51-187 (495)
143 PRK11273 glpT sn-glycerol-3-ph 98.9 8E-08 1.7E-12 97.9 18.8 138 320-457 70-212 (452)
144 TIGR00712 glpT glycerol-3-phos 98.9 5.1E-08 1.1E-12 98.9 16.9 138 320-457 68-210 (438)
145 TIGR00881 2A0104 phosphoglycer 98.9 1.1E-08 2.4E-13 101.1 11.8 138 320-457 37-175 (379)
146 PRK10091 MFS transport protein 98.9 1.2E-07 2.6E-12 94.3 19.1 138 320-457 45-182 (382)
147 KOG2325 Predicted transporter/ 98.9 5.1E-08 1.1E-12 96.8 15.9 168 21-188 28-234 (488)
148 PRK11646 multidrug resistance 98.9 2.3E-07 4.9E-12 93.0 20.7 133 323-456 56-188 (400)
149 TIGR00903 2A0129 major facilit 98.9 9.8E-08 2.1E-12 94.3 17.8 136 321-457 34-169 (368)
150 TIGR00886 2A0108 nitrite extru 98.9 1.6E-07 3.4E-12 92.7 18.8 107 320-427 44-151 (366)
151 TIGR00924 yjdL_sub1_fam amino 98.9 1.6E-07 3.4E-12 96.1 18.7 169 271-448 14-187 (475)
152 TIGR00890 2A0111 Oxalate/Forma 98.8 9.3E-08 2E-12 94.4 15.7 136 319-455 44-179 (377)
153 PRK09874 drug efflux system pr 98.8 4.1E-07 8.8E-12 91.2 20.4 135 321-456 62-196 (408)
154 TIGR00887 2A0109 phosphate:H+ 98.8 2.9E-07 6.4E-12 95.1 19.6 107 319-425 62-174 (502)
155 PRK09528 lacY galactoside perm 98.8 1.2E-07 2.7E-12 95.5 15.8 148 37-185 238-405 (420)
156 TIGR00880 2_A_01_02 Multidrug 98.8 1.5E-07 3.3E-12 78.5 13.4 101 86-186 39-141 (141)
157 PRK11043 putative transporter; 98.8 6.6E-07 1.4E-11 89.6 20.1 136 320-455 48-183 (401)
158 cd06174 MFS The Major Facilita 98.8 2.7E-07 5.9E-12 89.9 17.0 130 320-449 41-170 (352)
159 PRK11195 lysophospholipid tran 98.8 5.9E-07 1.3E-11 89.7 19.6 132 321-457 46-177 (393)
160 PRK10207 dipeptide/tripeptide 98.8 3.3E-07 7.2E-12 93.9 17.9 110 328-437 65-178 (489)
161 TIGR00892 2A0113 monocarboxyla 98.7 1.9E-07 4.1E-12 95.2 15.0 128 50-177 264-414 (455)
162 KOG0255 Synaptic vesicle trans 98.7 2E-07 4.3E-12 96.8 15.1 134 320-457 125-258 (521)
163 PF05977 MFS_3: Transmembrane 98.7 1.3E-06 2.9E-11 89.7 20.3 132 324-455 56-192 (524)
164 TIGR00879 SP MFS transporter, 98.7 2.8E-07 6.2E-12 94.0 15.6 138 319-457 77-220 (481)
165 COG2271 UhpC Sugar phosphate p 98.7 1.8E-07 3.8E-12 90.1 12.4 141 320-460 71-216 (448)
166 PRK10489 enterobactin exporter 98.7 6.9E-07 1.5E-11 90.0 17.6 137 320-457 59-200 (417)
167 PRK10077 xylE D-xylose transpo 98.7 7.6E-07 1.6E-11 91.4 18.1 138 319-457 61-218 (479)
168 PRK15011 sugar efflux transpor 98.7 8E-07 1.7E-11 88.8 17.7 133 52-185 242-392 (393)
169 PRK03633 putative MFS family t 98.7 1.6E-06 3.4E-11 86.3 19.8 109 319-427 47-155 (381)
170 PF03137 OATP: Organic Anion T 98.7 2.8E-09 6.1E-14 109.5 0.0 150 37-186 13-252 (539)
171 PRK15034 nitrate/nitrite trans 98.7 3.9E-06 8.4E-11 84.4 22.2 136 320-456 77-235 (462)
172 COG2814 AraJ Arabinose efflux 98.7 2.2E-06 4.8E-11 83.4 19.7 137 318-454 53-189 (394)
173 TIGR00898 2A0119 cation transp 98.7 4.3E-07 9.4E-12 93.9 15.7 134 320-457 134-267 (505)
174 PRK09584 tppB putative tripept 98.7 1.5E-06 3.3E-11 89.5 19.4 115 330-445 74-193 (500)
175 PRK10406 alpha-ketoglutarate t 98.7 2.5E-06 5.3E-11 86.4 20.6 134 324-458 74-223 (432)
176 TIGR00894 2A0114euk Na(+)-depe 98.7 1.8E-07 4E-12 95.6 12.3 136 321-456 84-222 (465)
177 TIGR00897 2A0118 polyol permea 98.6 1.8E-06 3.9E-11 86.5 18.1 112 319-430 54-170 (402)
178 PF03092 BT1: BT1 family; Int 98.6 2.2E-05 4.8E-10 79.2 25.8 138 48-185 11-177 (433)
179 PRK15075 citrate-proton sympor 98.6 3.3E-06 7.1E-11 85.6 19.9 98 327-424 70-175 (434)
180 PRK05122 major facilitator sup 98.6 2.3E-06 5E-11 85.6 18.2 118 320-437 58-183 (399)
181 PRK09556 uhpT sugar phosphate 98.6 4.2E-07 9.1E-12 93.0 12.8 134 321-454 72-213 (467)
182 TIGR00899 2A0120 sugar efflux 98.6 3.6E-06 7.8E-11 83.2 18.9 136 322-457 42-180 (375)
183 PF01770 Folate_carrier: Reduc 98.6 0.00013 2.7E-09 71.6 28.0 168 24-193 3-191 (412)
184 PRK09952 shikimate transporter 98.6 5.8E-06 1.3E-10 83.9 19.7 133 324-457 75-223 (438)
185 KOG2615 Permease of the major 98.6 2.5E-07 5.3E-12 87.7 8.5 135 322-457 77-217 (451)
186 TIGR00889 2A0110 nucleoside tr 98.5 1.8E-06 3.8E-11 87.0 15.4 89 98-186 308-405 (418)
187 TIGR00885 fucP L-fucose:H+ sym 98.5 1.1E-05 2.4E-10 81.0 20.5 108 319-426 44-154 (410)
188 PRK09705 cynX putative cyanate 98.5 4.1E-06 8.8E-11 83.7 17.0 124 320-444 51-175 (393)
189 PRK06814 acylglycerophosphoeth 98.5 8.5E-06 1.8E-10 92.9 21.1 135 322-457 61-198 (1140)
190 COG2223 NarK Nitrate/nitrite t 98.5 1.1E-05 2.3E-10 78.1 18.1 137 315-453 51-193 (417)
191 PRK12382 putative transporter; 98.5 1.2E-05 2.7E-10 80.1 19.6 112 320-431 58-177 (392)
192 PRK11010 ampG muropeptide tran 98.5 1.5E-05 3.3E-10 82.0 20.1 129 328-457 60-198 (491)
193 PRK08633 2-acyl-glycerophospho 98.4 1.3E-05 2.9E-10 91.4 20.7 108 321-428 55-165 (1146)
194 KOG3764 Vesicular amine transp 98.4 1.1E-06 2.3E-11 84.0 8.7 140 321-460 114-254 (464)
195 PF06609 TRI12: Fungal trichot 98.4 9.8E-06 2.1E-10 83.5 16.3 123 322-446 87-210 (599)
196 PRK10133 L-fucose transporter; 98.4 5E-05 1.1E-09 77.0 21.5 109 318-426 66-177 (438)
197 TIGR00883 2A0106 metabolite-pr 98.4 7.9E-06 1.7E-10 81.1 15.4 100 326-425 48-155 (394)
198 TIGR00896 CynX cyanate transpo 98.4 1.6E-05 3.4E-10 78.3 16.8 107 320-428 42-148 (355)
199 TIGR00901 2A0125 AmpG-related 98.4 1.5E-05 3.3E-10 78.3 16.4 128 330-457 38-182 (356)
200 KOG0569 Permease of the major 98.3 1.1E-05 2.5E-10 80.8 14.3 136 321-458 68-209 (485)
201 PTZ00207 hypothetical protein; 98.3 9.2E-05 2E-09 76.8 21.0 122 329-452 77-204 (591)
202 TIGR01301 GPH_sucrose GPH fami 98.3 9.4E-05 2E-09 75.0 20.0 139 319-457 45-222 (477)
203 KOG0254 Predicted transporter 98.3 1.6E-05 3.6E-10 82.3 14.8 138 319-458 95-234 (513)
204 TIGR00902 2A0127 phenyl propri 98.3 4.9E-05 1.1E-09 75.6 17.5 135 42-179 221-374 (382)
205 KOG1330 Sugar transporter/spin 98.2 1.3E-06 2.8E-11 85.1 5.1 141 323-463 78-219 (493)
206 PRK11902 ampG muropeptide tran 98.2 0.00013 2.8E-09 73.1 19.9 130 327-457 46-185 (402)
207 TIGR00806 rfc RFC reduced fola 98.2 0.00019 4.1E-09 71.6 19.4 107 323-431 72-178 (511)
208 KOG3626 Organic anion transpor 98.2 7.9E-05 1.7E-09 77.7 16.8 157 30-186 100-345 (735)
209 TIGR00882 2A0105 oligosacchari 98.2 0.00012 2.6E-09 73.1 18.0 136 318-456 43-186 (396)
210 PF03209 PUCC: PUCC protein; 98.1 0.011 2.5E-07 57.6 29.4 74 101-174 92-167 (403)
211 PF06813 Nodulin-like: Nodulin 98.0 0.00023 4.9E-09 65.6 14.7 160 26-187 2-185 (250)
212 COG3104 PTR2 Dipeptide/tripept 97.9 0.0046 9.9E-08 61.7 23.5 131 48-178 47-200 (498)
213 TIGR00805 oat sodium-independe 97.9 9.1E-05 2E-09 78.4 12.6 107 321-427 76-233 (633)
214 COG3104 PTR2 Dipeptide/tripept 97.9 0.00014 3.1E-09 72.0 12.9 129 329-459 77-212 (498)
215 KOG2816 Predicted transporter 97.9 0.004 8.6E-08 63.0 23.1 81 107-187 119-203 (463)
216 PF01306 LacY_symp: LacY proto 97.9 0.00044 9.5E-09 68.2 15.6 174 7-181 205-397 (412)
217 PRK11128 putative 3-phenylprop 97.9 0.00081 1.8E-08 66.9 17.3 125 55-181 233-376 (382)
218 PF02487 CLN3: CLN3 protein; 97.9 0.0073 1.6E-07 59.4 23.1 104 78-186 92-198 (402)
219 KOG2504 Monocarboxylate transp 97.8 0.00022 4.8E-09 73.1 12.6 158 27-184 298-476 (509)
220 PF11700 ATG22: Vacuole efflux 97.8 0.0015 3.3E-08 66.5 18.3 148 37-185 293-469 (477)
221 KOG2532 Permease of the major 97.8 0.00039 8.6E-09 70.4 13.9 132 321-452 81-215 (466)
222 TIGR00792 gph sugar (Glycoside 97.8 0.00057 1.2E-08 69.1 15.2 138 320-457 42-198 (437)
223 TIGR02718 sider_RhtX_FptX side 97.8 0.0023 5.1E-08 63.7 18.7 71 386-456 117-187 (390)
224 KOG2816 Predicted transporter 97.7 0.00038 8.2E-09 70.3 12.6 137 323-462 72-208 (463)
225 PF06813 Nodulin-like: Nodulin 97.7 0.0013 2.9E-08 60.5 14.1 134 282-428 17-157 (250)
226 PF00083 Sugar_tr: Sugar (and 97.7 6E-07 1.3E-11 91.4 -9.0 104 319-422 52-158 (451)
227 TIGR00788 fbt folate/biopterin 97.5 0.0058 1.3E-07 62.5 17.7 125 331-457 78-212 (468)
228 COG0738 FucP Fucose permease [ 97.5 0.015 3.2E-07 56.5 18.3 103 324-427 59-165 (422)
229 KOG2533 Permease of the major 97.3 0.0022 4.8E-08 65.3 11.3 139 320-458 88-232 (495)
230 KOG3098 Uncharacterized conser 97.3 0.26 5.6E-06 49.6 26.6 60 95-154 99-159 (461)
231 PRK09669 putative symporter Ya 97.2 0.0057 1.2E-07 62.2 13.4 105 323-427 55-171 (444)
232 PF03825 Nuc_H_symport: Nucleo 97.2 0.027 5.8E-07 56.2 17.7 81 105-185 308-397 (400)
233 COG0477 ProP Permeases of the 97.1 0.028 6.1E-07 52.8 16.9 137 39-175 14-176 (338)
234 PF13347 MFS_2: MFS/sugar tran 97.1 0.0022 4.7E-08 64.9 9.3 128 328-455 52-200 (428)
235 PF05631 DUF791: Protein of un 97.0 0.15 3.3E-06 49.0 19.9 134 325-459 81-222 (354)
236 PRK10429 melibiose:sodium symp 97.0 0.023 5E-07 58.2 15.7 102 324-425 53-166 (473)
237 KOG3810 Micronutrient transpor 97.0 0.015 3.3E-07 55.1 12.4 99 92-190 89-189 (433)
238 KOG3762 Predicted transporter 97.0 0.013 2.8E-07 58.9 12.6 127 321-447 414-541 (618)
239 PRK09848 glucuronide transport 96.9 0.078 1.7E-06 53.9 18.5 79 79-157 298-386 (448)
240 PRK11462 putative transporter; 96.9 0.04 8.7E-07 56.2 16.0 103 326-428 58-172 (460)
241 PF06963 FPN1: Ferroportin1 (F 96.8 0.44 9.5E-06 47.8 22.3 102 320-421 300-411 (432)
242 KOG0253 Synaptic vesicle trans 96.8 0.1 2.2E-06 50.3 16.5 135 321-458 121-255 (528)
243 TIGR00769 AAA ADP/ATP carrier 96.7 0.36 7.8E-06 49.0 21.1 41 386-426 149-189 (472)
244 COG2270 Permeases of the major 96.7 0.07 1.5E-06 52.3 14.9 160 25-186 253-431 (438)
245 KOG0252 Inorganic phosphate tr 96.4 0.031 6.7E-07 55.2 10.7 161 25-188 302-502 (538)
246 TIGR01272 gluP glucose/galacto 96.3 0.24 5.1E-06 47.7 16.2 126 41-169 155-300 (310)
247 COG2211 MelB Na+/melibiose sym 96.2 0.15 3.3E-06 51.3 14.8 136 326-461 61-212 (467)
248 PF06779 DUF1228: Protein of u 96.2 0.023 5.1E-07 42.5 6.9 62 40-101 5-83 (85)
249 TIGR00926 2A1704 Peptide:H+ sy 96.2 0.2 4.3E-06 53.2 16.1 121 330-450 40-179 (654)
250 PF03092 BT1: BT1 family; Int 95.8 0.088 1.9E-06 53.3 11.4 129 331-460 42-182 (433)
251 PF03209 PUCC: PUCC protein; 95.7 1.3 2.8E-05 43.6 18.2 170 6-179 191-393 (403)
252 PF05631 DUF791: Protein of un 95.7 2.2 4.9E-05 41.2 24.4 162 20-186 31-219 (354)
253 KOG3762 Predicted transporter 95.2 0.15 3.2E-06 51.6 10.0 91 90-180 451-543 (618)
254 KOG4686 Predicted sugar transp 94.8 0.73 1.6E-05 42.9 12.6 126 53-179 291-437 (459)
255 KOG2563 Permease of the major 94.8 0.7 1.5E-05 45.9 13.2 108 320-428 86-202 (480)
256 PF07672 MFS_Mycoplasma: Mycop 94.6 1.9 4E-05 39.8 14.6 56 128-183 1-61 (267)
257 COG2807 CynX Cyanate permease 94.6 3.4 7.4E-05 40.1 16.9 154 23-181 208-382 (395)
258 PF00854 PTR2: POT family; In 94.4 0.18 3.9E-06 49.8 8.6 81 99-179 34-118 (372)
259 PF02487 CLN3: CLN3 protein; 94.3 1.5 3.3E-05 43.3 14.6 101 56-156 275-394 (402)
260 PF05978 UNC-93: Ion channel r 94.3 1.9 4.1E-05 36.7 13.2 97 325-423 49-146 (156)
261 PF05978 UNC-93: Ion channel r 94.1 1.4 3E-05 37.5 12.2 63 94-156 85-148 (156)
262 COG0477 ProP Permeases of the 93.8 1.8 3.9E-05 40.2 14.0 104 323-426 49-156 (338)
263 PF03219 TLC: TLC ATP/ADP tran 91.4 19 0.00041 37.0 20.0 42 386-427 164-205 (491)
264 TIGR00926 2A1704 Peptide:H+ sy 90.6 8.5 0.00018 41.1 15.3 79 101-179 88-177 (654)
265 PF12832 MFS_1_like: MFS_1 lik 90.0 3.1 6.8E-05 30.5 8.2 33 318-350 40-72 (77)
266 KOG2325 Predicted transporter/ 89.4 4.1 8.9E-05 41.4 11.1 133 321-455 79-231 (488)
267 TIGR00769 AAA ADP/ATP carrier 88.4 32 0.00069 35.2 25.5 38 120-157 152-189 (472)
268 COG3202 ATP/ADP translocase [E 85.7 44 0.00095 34.0 19.6 37 122-158 173-209 (509)
269 PF01770 Folate_carrier: Reduc 85.6 41 0.0009 33.6 16.6 123 331-454 59-183 (412)
270 PF03219 TLC: TLC ATP/ADP tran 83.0 60 0.0013 33.4 17.7 39 120-158 167-205 (491)
271 PF06963 FPN1: Ferroportin1 (F 82.2 24 0.00052 35.6 12.4 41 116-156 375-415 (432)
272 PRK03612 spermidine synthase; 81.8 69 0.0015 33.3 17.4 71 103-174 115-188 (521)
273 PF00854 PTR2: POT family; In 79.4 15 0.00033 36.1 10.1 67 385-451 52-121 (372)
274 PF13000 Acatn: Acetyl-coenzym 78.5 26 0.00057 35.7 11.0 25 335-359 62-87 (544)
275 PF06779 DUF1228: Protein of u 70.9 42 0.00091 25.2 8.7 45 321-365 35-79 (85)
276 KOG3098 Uncharacterized conser 62.1 95 0.0021 31.6 11.0 96 325-421 62-157 (461)
277 KOG3880 Predicted small molecu 58.5 42 0.00091 32.1 7.1 94 63-156 289-401 (409)
278 PF11947 DUF3464: Protein of u 57.6 39 0.00084 28.5 6.2 81 335-415 56-143 (153)
279 KOG2881 Predicted membrane pro 53.7 1.8E+02 0.004 26.8 10.1 32 324-355 251-282 (294)
280 PF01733 Nucleoside_tran: Nucl 49.8 6.3 0.00014 37.8 0.5 36 385-420 267-302 (309)
281 PF11151 DUF2929: Protein of u 49.1 81 0.0018 21.6 5.7 47 141-187 10-56 (57)
282 PF13000 Acatn: Acetyl-coenzym 45.5 3.7E+02 0.0079 27.8 18.6 42 385-426 424-465 (544)
283 PRK10697 DNA-binding transcrip 44.3 48 0.001 26.6 4.5 31 177-207 57-87 (118)
284 TIGR02978 phageshock_pspC phag 39.8 80 0.0017 25.5 5.2 31 159-189 28-64 (121)
285 PF06341 DUF1056: Protein of u 39.8 43 0.00094 23.3 3.1 38 95-132 25-62 (63)
286 TIGR00939 2a57 Equilibrative N 38.8 4.3E+02 0.0093 26.7 22.8 37 385-421 391-427 (437)
287 KOG1237 H+/oligopeptide sympor 35.1 5.6E+02 0.012 27.0 13.4 206 261-478 31-268 (571)
288 PF04024 PspC: PspC domain; I 35.1 50 0.0011 22.9 3.0 30 158-187 27-60 (61)
289 KOG4332 Predicted sugar transp 35.0 4E+02 0.0086 25.2 14.5 62 91-154 117-184 (454)
290 KOG3880 Predicted small molecu 33.0 4.6E+02 0.01 25.4 11.0 97 86-186 103-202 (409)
291 KOG4332 Predicted sugar transp 30.8 1.2E+02 0.0026 28.5 5.5 16 332-347 91-106 (454)
292 PF04281 Tom22: Mitochondrial 30.8 1.1E+02 0.0023 25.4 4.6 23 122-144 60-82 (137)
293 KOG3626 Organic anion transpor 28.9 1.9E+02 0.0042 31.3 7.4 43 386-428 606-649 (735)
294 TIGR00986 3a0801s05tom22 mitoc 25.4 1.3E+02 0.0028 25.0 4.2 22 122-143 58-79 (145)
295 PRK10263 DNA translocase FtsK; 25.3 1.2E+03 0.025 27.6 14.8 18 324-341 63-80 (1355)
296 PRK03612 spermidine synthase; 25.2 7.9E+02 0.017 25.6 20.6 26 401-426 144-169 (521)
297 PF13829 DUF4191: Domain of un 23.1 2.3E+02 0.0049 25.7 5.7 50 161-210 50-101 (224)
298 PF13428 TPR_14: Tetratricopep 21.7 1.4E+02 0.003 18.7 3.1 22 189-210 10-31 (44)
299 KOG0637 Sucrose transporter an 21.1 3.6E+02 0.0077 27.5 7.1 38 383-420 159-197 (498)
300 KOG2765 Predicted membrane pro 20.2 5.1E+02 0.011 25.6 7.7 14 156-169 36-49 (416)
No 1
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=7.3e-56 Score=406.10 Aligned_cols=444 Identities=39% Similarity=0.652 Sum_probs=370.5
Q ss_pred cccccHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH---------
Q 011756 7 RLVYTLDEALTFMGFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS--------- 77 (478)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~--------- 77 (478)
.|...+||+++++|+|++|+...+++++||+.|.++.+..+++.|..+..|+++..|.+++.+..+.|+.+
T Consensus 58 ~k~~tv~ea~~aigfgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~ 137 (528)
T KOG0253|consen 58 AKSFTVDEAMNAIGFGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSA 137 (528)
T ss_pred cceeeehhhhhhcCcccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheeh
Confidence 35667899999999999999999999999999999999999999999999999999999998888888766
Q ss_pred --------HHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCchhhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHH
Q 011756 78 --------ILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 149 (478)
Q Consensus 78 --------~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~ 149 (478)
+..+.+...+.+.+.+++||+..+.+.|.+.|+|+|+.++..++..|..|..+|+..+-+. ..|.+|.+..
T Consensus 138 d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~e 216 (528)
T KOG0253|consen 138 DTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGGLPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFE 216 (528)
T ss_pred hhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCCccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHH
Confidence 4555666677778899999999999999999999999878888899999999999998888 8999999999
Q ss_pred HHHHHHHhcCcchHHHHHHhhHHHHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCccc
Q 011756 150 AALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDE 229 (478)
Q Consensus 150 ~~~~~~~~~~~~WR~~f~i~~i~~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (478)
..+++.+++..||||..+..+.|..+...+..++||||||.+.||++++|.+.+++++++|++..|...+....++++++
T Consensus 217 a~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~ 296 (528)
T KOG0253|consen 217 ALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQ 296 (528)
T ss_pred HHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhh
Confidence 99999999999999999998999999999999999999999999999999999999999999887765443332222222
Q ss_pred ccCCCCcccccccccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCccccc-----
Q 011756 230 EFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSI----- 304 (478)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----- 304 (478)
+ +...++ .+.+..+++..+...+++|+++|+++++|..|++|.+.|||..++...+......|....
T Consensus 297 e------~~~~~~--~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~ 368 (528)
T KOG0253|consen 297 E------ESDLDD--SKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPT 368 (528)
T ss_pred h------hhchhh--hhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchh
Confidence 1 111111 111122334456788999999999999999999999999999998887764433332211
Q ss_pred -ccc---cCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHh
Q 011756 305 -LLS---ENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFS 380 (478)
Q Consensus 305 -~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (478)
... -......-|.+.++..+..+||.++.++++||+|||+.|..+.++++++.+....-.+.....++.+.+.+|.
T Consensus 369 e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafi 448 (528)
T KOG0253|consen 369 ELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFI 448 (528)
T ss_pred HHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH
Confidence 110 0122234477888999999999999999999999999999999988888776655444455677888888999
Q ss_pred hhhhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccccCcc
Q 011756 381 MGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKE 460 (478)
Q Consensus 381 ~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g~~ 460 (478)
.+.+...|+|.+|+||+.+|++|.|.+..++|+|++++|+++ +....+.+.+..+++++++++++.+.++|.|||||+
T Consensus 449 sg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~ 526 (528)
T KOG0253|consen 449 SGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRS 526 (528)
T ss_pred hchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCC
Confidence 999999999999999999999999999999999999999987 344445567888999999999999999999999997
Q ss_pred c
Q 011756 461 L 461 (478)
Q Consensus 461 l 461 (478)
+
T Consensus 527 l 527 (528)
T KOG0253|consen 527 L 527 (528)
T ss_pred C
Confidence 5
No 2
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=7e-47 Score=395.72 Aligned_cols=451 Identities=26% Similarity=0.414 Sum_probs=331.8
Q ss_pred ccccHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH----------
Q 011756 8 LVYTLDEALTFMGFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS---------- 77 (478)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~---------- 77 (478)
.+...|+++|+++.+++||.+++.++++++.+++|...+++..|.+++++++++.+.+++.+++++|.++
T Consensus 148 ~~~~~d~~l~~~~~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsD 227 (742)
T TIGR01299 148 LAQQYELIIQECGHGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLAD 227 (742)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999999999999999999999999999998887666
Q ss_pred -------HHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHH
Q 011756 78 -------ILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 149 (478)
Q Consensus 78 -------~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~ 149 (478)
++.+.+++.+++++++++++++.++++|++.|+|.|+. ++..+++.|++|+++||+..++.+.++.+|.+++
T Consensus 228 R~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila 307 (742)
T TIGR01299 228 KLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYA 307 (742)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777788888899999999999999999999876 4667889999999999999999999999999999
Q ss_pred HHHHHHHhcC-------------cchHHHHHHhhHHHHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCC
Q 011756 150 AALAWIVMPI-------------LTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPS 216 (478)
Q Consensus 150 ~~~~~~~~~~-------------~~WR~~f~i~~i~~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~ 216 (478)
+.++..+.+. .+||+++++.++|.++.++.++++||||||+..|||.+||.++++++++.|++....
T Consensus 308 ~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~ 387 (742)
T TIGR01299 308 AAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGH 387 (742)
T ss_pred HHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCc
Confidence 9887665442 369999999999999888888999999999999999999999999998776542110
Q ss_pred C--CCC------CCCCCCcccccCCCCcccccccccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 011756 217 G--NLT------SDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVL 288 (478)
Q Consensus 217 ~--~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (478)
. ... .+.+++..+..+. ...................+.+++.+|+++++++++++|++|++..+.||++..
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~ 466 (742)
T TIGR01299 388 PEKVFSVNHIKTIHQEDELIEIESD-TGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSV 466 (742)
T ss_pred hhHHHHHHHHHHhhhhhhhhccccc-ccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000 0000000000000 000000000000000011123467789999999999999999999999999999
Q ss_pred HHHhhhCCC------------CC---------------------c-----ccccc---c---------------c-----
Q 011756 289 LASELSGSQ------------SK---------------------C-----SSSIL---L---------------S----- 307 (478)
Q Consensus 289 ~~~~l~~~~------------~~---------------------~-----~~~~~---~---------------~----- 307 (478)
|.|.+.... +. . .+... . .
T Consensus 467 w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (742)
T TIGR01299 467 WFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFF 546 (742)
T ss_pred HHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhh
Confidence 999763210 00 0 00000 0 0
Q ss_pred ----------cC---------------------------------ccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHH
Q 011756 308 ----------EN---------------------------------VQDASVYINVFITSFAELPGLLTAALLVDRVGRKL 344 (478)
Q Consensus 308 ----------~~---------------------------------~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~ 344 (478)
.+ ......+...++..++.++|.+++++++||+|||+
T Consensus 547 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~ 626 (742)
T TIGR01299 547 KNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLR 626 (742)
T ss_pred hccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 00 00012344456677889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHH
Q 011756 345 SMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVG 424 (478)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~ 424 (478)
++..+.++.+++.+.+....+.....++.++..++..+.++..+.+.+|++|++.|++++|+++.++++|++++|.+.+.
T Consensus 627 ~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~ 706 (742)
T TIGR01299 627 MLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGS 706 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888777776655544433222222222333344445667788999999999999999999999999999999999877
Q ss_pred HhhccchhHHHHHHHHHHHHHHHHHHhccccccCccc
Q 011756 425 LVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKEL 461 (478)
Q Consensus 425 l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g~~l 461 (478)
+... +...++++++++.++++++.+++ |||+|+.|
T Consensus 707 L~~~-~~~~pf~i~a~~lll~~ll~~~L-PET~~~~l 741 (742)
T TIGR01299 707 FVGI-TKAAPILFASAALACGGLLALKL-PDTRGQVL 741 (742)
T ss_pred HHHh-hhHHHHHHHHHHHHHHHHHHHhC-CCCccccc
Confidence 7654 33456777777777776666654 89999875
No 3
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=6.4e-44 Score=367.19 Aligned_cols=427 Identities=22% Similarity=0.303 Sum_probs=292.8
Q ss_pred HHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhc-----CCCcchhhHHHHHHHHHHHH-----------
Q 011756 14 EALTFMGFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEW-----GLSSSEESLITTVVFAGMMS----------- 77 (478)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~l~~~~~~~~~s~~~~G~~~----------- 77 (478)
|++|+.+++++|++++.+++++.+.|++|...++.+.|.+.+++ +.++.+.+++.+...+|.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~ 82 (502)
T TIGR00887 3 EEADTAPFGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADK 82 (502)
T ss_pred chhhccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 57799999999999999999999999999999999999987753 34556778888888776555
Q ss_pred ------HHHHHHHHHHHHHHHhhhch------HHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHH
Q 011756 78 ------ILGGALVTFVAGLLSAFSPN------YISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTF 144 (478)
Q Consensus 78 ------~~~~~~~~~i~~~~~~~a~~------~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 144 (478)
+..+.+++.+++++++++++ +..++++|++.|++.|.. +....|+.|++|+|+||+.+++.+..+.+
T Consensus 83 ~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~ 162 (502)
T TIGR00887 83 LGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGF 162 (502)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHH
Confidence 45566677777787787766 789999999999999986 45678899999999999999999999999
Q ss_pred HHHHHHHHHHHHhc-----------------------CcchHHHHHHhhHHHHHHHHHHHhcCCCchhhhhcCChh-HHH
Q 011756 145 GSVSEAALAWIVMP-----------------------ILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRIT-DAH 200 (478)
Q Consensus 145 G~~~~~~~~~~~~~-----------------------~~~WR~~f~i~~i~~~l~~~~~~~lpESP~~l~~~~~~~-~a~ 200 (478)
|.++++.++..+.+ .++||++|.++++|+++.++.++++||||||+..|+|+| +++
T Consensus 163 g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~ 242 (502)
T TIGR00887 163 GILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAA 242 (502)
T ss_pred HHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHH
Confidence 99998888765421 247999999999999988888899999999999999875 577
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccccccccchhhcccC----cchHHHHHHHHHHH
Q 011756 201 NILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS----PRFFKTTILLWVLY 276 (478)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~ 276 (478)
+.+++.++.+..+ +.++.++..+ ++ +. .+ .+++++++ +++++.++..+..+
T Consensus 243 ~~~~~~~~~~~~~---------~~~~~~~~~~--~~---------~~--~~---~~~~~l~~~~~~~~~~~~~~~~~~~~ 297 (502)
T TIGR00887 243 SDMSAVLQVKIEA---------EPDEVEKAST--AV---------EV--PK---ASWSDFFTHFFKWRHGKHLLGTAGSW 297 (502)
T ss_pred HHHHHHhcccccc---------Ccccccchhc--cc---------cc--hh---hhHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 7777665321100 0001000000 00 00 00 12333332 23334444445556
Q ss_pred HHHHHHHHHHHHHHHhhhCCCCCcccc-cccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 011756 277 FGNSFVYYGIVLLASELSGSQSKCSSS-ILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCI 355 (478)
Q Consensus 277 ~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~ 355 (478)
+...+.+|+...+.|.+....+..... ........-.....+..+..++.++|.++.++++||+|||+.++.+..+.++
T Consensus 298 ~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~ 377 (502)
T TIGR00887 298 FLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTV 377 (502)
T ss_pred HHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHH
Confidence 666778888777776654322110000 0000000000111123444566788999999999999999988776655544
Q ss_pred HHHHHHhhc---hhHHHHHHH-HHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhcc--
Q 011756 356 FLLPLVTLQ---SNILLTALL-SGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC-- 429 (478)
Q Consensus 356 ~~~~~~~~~---~~~~~~~~~-~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~-- 429 (478)
+...+.... .......+. ....++..+..+..+.+.+|++|++.|+++.|+++.+++++++++|++.+.+.+..
T Consensus 378 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ 457 (502)
T TIGR00887 378 LFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDP 457 (502)
T ss_pred HHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccc
Confidence 333322211 111111111 11222234556677899999999999999999999999999999999998887632
Q ss_pred --------chhHHHHHHHHHHHHHHHHHHhccccccCcccchhhc
Q 011756 430 --------HQTAAILLLEALIVLSVVVILLIPFETKGKELVNTID 466 (478)
Q Consensus 430 --------~~~~~~~~~~~~~~i~~~~~~~~~pet~g~~l~~~~~ 466 (478)
+....+.+++++++++.+.. ++.||||||++||...
T Consensus 458 ~~~~~~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt~~~~leei~~ 501 (502)
T TIGR00887 458 TKGYPTGIWMGHVLEIFALFMFLGILFT-LLIPETKGKSLEELSG 501 (502)
T ss_pred cccccccccchHHHHHHHHHHHHHHHHh-eEeccCCCCCHHhhhC
Confidence 12346777888877776654 5679999999987543
No 4
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.4e-39 Score=316.84 Aligned_cols=413 Identities=22% Similarity=0.330 Sum_probs=284.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhH--------HhhhhhcC--CCcchhhHHH----HHHHHHHHH---------
Q 011756 21 FGKFQGLALAYSGLGWFSEAMEVMILSFVG--------PAVKSEWG--LSSSEESLIT----TVVFAGMMS--------- 77 (478)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~--l~~~~~~~~~----s~~~~G~~~--------- 77 (478)
.++....+.+.+.+|-+-.+|....++... .+..+.++ +++++..++. |.+++|.++
T Consensus 5 ~t~~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la 84 (485)
T KOG0569|consen 5 LTRRLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLA 84 (485)
T ss_pred ccHHHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555556666666677665555433 33344555 5555555544 445555444
Q ss_pred --------HHHHHHHHHHHHH---HHhhhchHHHHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHH
Q 011756 78 --------ILGGALVTFVAGL---LSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFG 145 (478)
Q Consensus 78 --------~~~~~~~~~i~~~---~~~~a~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G 145 (478)
+..+.++..++++ .+-..+++++++++|++.|+..|... ....|+.|.+|++.||....+.+.+..+|
T Consensus 85 ~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g 164 (485)
T KOG0569|consen 85 DRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIG 164 (485)
T ss_pred HhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHH
Confidence 3334444444443 34456889999999999999988764 45678999999999999999999999999
Q ss_pred HHHHHHHHHH--HhcCcchHHHHHHhhHHHHHHHHHHHhcCCCchhhhh-cCChhHHHHHHHHHHHHcCCCCCCCCCCCC
Q 011756 146 SVSEAALAWI--VMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCT-KGRITDAHNILDKIAQFNQTSLPSGNLTSD 222 (478)
Q Consensus 146 ~~~~~~~~~~--~~~~~~WR~~f~i~~i~~~l~~~~~~~lpESP~~l~~-~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 222 (478)
.+++..++.- +.+...|++++.+..+|+++.++..+++|||||||.. |||.|||+|.+++++..+..+
T Consensus 165 ~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~--------- 235 (485)
T KOG0569|consen 165 ILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVE--------- 235 (485)
T ss_pred HHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcch---------
Confidence 9999877653 4456679999999999999999999999999999999 899999999999997543211
Q ss_pred CCCCcccccCCCCcccccccccccccccccccchhhcccC-cchHHHHHHHHHHHHH------HHHHHHHHHHHHHhhhC
Q 011756 223 GTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS-PRFFKTTILLWVLYFG------NSFVYYGIVLLASELSG 295 (478)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~ 295 (478)
.+.+++.++.++ ++ ..++...++.++++ +++|+...+...+.++ +...+|+..++..
T Consensus 236 --~~~e~~~~e~~~--------~~--~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~---- 299 (485)
T KOG0569|consen 236 --AEIEEMLREIEE--------EE--LEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT---- 299 (485)
T ss_pred --hHHHHHHHHHHH--------hc--cccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH----
Confidence 000000000000 00 00001124555555 4555554444443333 3445666665543
Q ss_pred CCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh---hch---hHHH
Q 011756 296 SQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT---LQS---NILL 369 (478)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~---~~~---~~~~ 369 (478)
. +......-......+...++..+++.+++||.|||++++.+..++.++.+.+.. ..+ .+..
T Consensus 300 -a-----------G~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 367 (485)
T KOG0569|consen 300 -A-----------GFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLS 367 (485)
T ss_pred -c-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 1 111122223345566778999999999999999999999887766654443321 111 1211
Q ss_pred ----HHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHH
Q 011756 370 ----TALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLS 445 (478)
Q Consensus 370 ----~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~ 445 (478)
.........+..|+.++.|.+.+|++|++.|+++.+++..+.++++++..+.++++.+..+. ..+++|.+.+.+.
T Consensus 368 y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~ 446 (485)
T KOG0569|consen 368 YLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIF 446 (485)
T ss_pred HHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHH
Confidence 12222333456688889999999999999999999999999999999999999988877765 6788899999999
Q ss_pred HHHHHhccccccCcccchhhcccccc
Q 011756 446 VVVILLIPFETKGKELVNTIDGVSNS 471 (478)
Q Consensus 446 ~~~~~~~~pet~g~~l~~~~~~~~~~ 471 (478)
.+..++++||||||+..|+.++.++.
T Consensus 447 ~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 447 LIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 99999999999999999988876543
No 5
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=3e-38 Score=326.00 Aligned_cols=407 Identities=31% Similarity=0.536 Sum_probs=292.0
Q ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHH--HhHHhhhhhcCCC---cchhhHHHHHHHHHHHH---------
Q 011756 12 LDEALTFMGFGKFQGLALAYSGLGWFSEAMEVMILS--FVGPAVKSEWGLS---SSEESLITTVVFAGMMS--------- 77 (478)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~---~~~~~~~~s~~~~G~~~--------- 77 (478)
.|+..+..+.+++++..... +.....+..|....+ ...|++.+||+++ +.+.++..+++++|.++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~ 151 (505)
T TIGR00898 73 VDQWANPSLLGCEPLKLSDL-GLAATEPCLDGWEYSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLS 151 (505)
T ss_pred ccchhhhcccccccchhccc-CCCCCCCCCCCcEecCCcccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhh
Confidence 34444555566666543322 334444555544444 4578899999999 78899999999887665
Q ss_pred --------HHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHH
Q 011756 78 --------ILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVS 148 (478)
Q Consensus 78 --------~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~ 148 (478)
++.+.++..+++++.++++|++.+++.|++.|++.|.. +....++.|++|+++|++..++.+.++.+|.++
T Consensus 152 Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~ 231 (505)
T TIGR00898 152 DRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVL 231 (505)
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHH
Confidence 55566777788888899999999999999999999885 466778999999999999999999999999999
Q ss_pred HHHHHHHHhcCcchHHHHHHhhHHHHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcc
Q 011756 149 EAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLD 228 (478)
Q Consensus 149 ~~~~~~~~~~~~~WR~~f~i~~i~~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (478)
++.+++.+. +||+.|++.+++.++..+..+++||||||+..++|.||+++.+++..+.|+++.+++.. +
T Consensus 232 ~~~~~~~~~---~wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~--------~ 300 (505)
T TIGR00898 232 LPLVAYFIP---DWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVL--------S 300 (505)
T ss_pred HHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHH--------h
Confidence 998887653 49999999999998887777889999999999999999999999998877543211000 0
Q ss_pred cccCCCCcccccccccccccccccccchhhccc-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccc
Q 011756 229 EEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLS 307 (478)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 307 (478)
.. .++ + ..++ + +..+.++++ ++++++.++..+..++...+.||+...+.+.+.
T Consensus 301 ~~---~~~-~-----~~~~---~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 354 (505)
T TIGR00898 301 LS---LEK-D-----LSSS---K-KQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLG------------- 354 (505)
T ss_pred hh---hhh-h-----hhhc---c-CCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccC-------------
Confidence 00 000 0 0000 0 001234444 456666666666777777777887766544221
Q ss_pred cCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchh--HHHHHHHHHHHHHhhhhhh
Q 011756 308 ENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSN--ILLTALLSGARMFSMGTFI 385 (478)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~ 385 (478)
.+.+.+..+.++..+++.++.++++||+|||+.+..+..+.++..+.+....+. ...........++..+.++
T Consensus 355 -----~~~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (505)
T TIGR00898 355 -----GNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQ 429 (505)
T ss_pred -----CChHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 112344556677889999999999999999999888776665554443332221 2222333333344445567
Q ss_pred hhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccccCcccchh
Q 011756 386 IANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELVNT 464 (478)
Q Consensus 386 ~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g~~l~~~ 464 (478)
..+.+.+|++|++.|+++.|+.+.++++|++++|.+.+ + ...+...++.+++++.+++.+..+ +.|||++++++|+
T Consensus 430 ~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~lpet~~~~l~~t 505 (505)
T TIGR00898 430 MVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTL-FLPETKGVPLPET 505 (505)
T ss_pred HHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHH-cCcCCCCCCCCCC
Confidence 78899999999999999999999999999999999877 3 333445667777777777766655 4589999999874
No 6
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-38 Score=302.24 Aligned_cols=423 Identities=22% Similarity=0.315 Sum_probs=297.0
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhc-C-------CCcchhhHHHHHHHHHHHH--------------
Q 011756 20 GFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEW-G-------LSSSEESLITTVVFAGMMS-------------- 77 (478)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------l~~~~~~~~~s~~~~G~~~-------------- 77 (478)
+.+++|...+.++++|.+.|+||.+.++.+.|.+.+.| + +++.-.+.+..+.++|.++
T Consensus 34 g~qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GR 113 (538)
T KOG0252|consen 34 GLQWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGR 113 (538)
T ss_pred chhHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 45899999999999999999999999999999998775 2 4455567777777777555
Q ss_pred ---HHHHHHHHHHHHHHHhhhc-------hHHHHHHHHHHhhcccCchhh-HHHHHhhccCCCCchhHHHHHHHHHHHHH
Q 011756 78 ---ILGGALVTFVAGLLSAFSP-------NYISLLILRGLAGAGLGSGHV-FFSWFMEFVPPSNRGKWMVVFSTFWTFGS 146 (478)
Q Consensus 78 ---~~~~~~~~~i~~~~~~~a~-------~~~~l~~~R~l~Gig~g~~~~-~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~ 146 (478)
....+++..+++++++++. -..++.+.|++.|+|+|+.++ ..+..+|.+-+++||...+.....+.+|.
T Consensus 114 K~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gi 193 (538)
T KOG0252|consen 114 KKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGI 193 (538)
T ss_pred hhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhH
Confidence 2334556667776666542 257899999999999999865 45678999999999999999888899998
Q ss_pred HHHHHHHHHHhc-------C--------cchHHHHHHhhHHHHHHHHHHHhcCCCchhhhhcCCh-hHHHHHHHHHHHHc
Q 011756 147 VSEAALAWIVMP-------I--------LTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRI-TDAHNILDKIAQFN 210 (478)
Q Consensus 147 ~~~~~~~~~~~~-------~--------~~WR~~f~i~~i~~~l~~~~~~~lpESP~~l~~~~~~-~~a~~~l~~~~~~~ 210 (478)
+.+.+++..+.. . .=||..|.++.+|+++.++.|+.||||+||...+.|+ ++|. ++.
T Consensus 194 laG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~---~d~---- 266 (538)
T KOG0252|consen 194 LAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAA---GDM---- 266 (538)
T ss_pred hhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhh---hcc----
Confidence 888887766421 1 1399999999999999999999999999998544332 3322 111
Q ss_pred CCCCCCCCCCCCCCCCcccccCCCCcccccccccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011756 211 QTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLA 290 (478)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (478)
.++.. . ++++..+..+ . ....++....+..++..++-+..+.....|+...+.+|+..+++
T Consensus 267 ~k~~~-~--------~~~~~~~~~~---------~-~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~ 327 (538)
T KOG0252|consen 267 KKVLS-V--------DIEAESTAES---------D-VPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQ 327 (538)
T ss_pred ccccc-c--------ccchhhcccc---------C-CCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHH
Confidence 11100 0 0000000000 0 00011111223333333344555566677888888899998888
Q ss_pred HhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhH---
Q 011756 291 SELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNI--- 367 (478)
Q Consensus 291 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~--- 367 (478)
..+..+.+..++..... ..-.....+.++..+..+||++++.+++|++|||++.+.++++.+++.+.+...+++.
T Consensus 328 s~I~~~ig~~~~~~~~~--~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~ 405 (538)
T KOG0252|consen 328 SVIFSAIGVIPSANTYH--ELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENT 405 (538)
T ss_pred HHHHHhhccCCCcchHH--HHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCccccccc
Confidence 77664333222211100 0001233466777788899999999999999999999999998888877776654421
Q ss_pred -HHHHHH-HHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhh-----ccchhHHHHHHHH
Q 011756 368 -LLTALL-SGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT-----SCHQTAAILLLEA 440 (478)
Q Consensus 368 -~~~~~~-~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~-----~~~~~~~~~~~~~ 440 (478)
...++. +...+...|++....++++|.||+++|+++.|++.+.|.+|++++.+.+.++.+ ..+....+++++.
T Consensus 406 ~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~ 485 (538)
T KOG0252|consen 406 IGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAG 485 (538)
T ss_pred CceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHH
Confidence 112222 233344678888899999999999999999999999999999999999888877 4444567888888
Q ss_pred HHHHHHHHHHhccccccCcccchhhcccccc
Q 011756 441 LIVLSVVVILLIPFETKGKELVNTIDGVSNS 471 (478)
Q Consensus 441 ~~~i~~~~~~~~~pet~g~~l~~~~~~~~~~ 471 (478)
+++++.++.+++ ||||||++||.-++.+..
T Consensus 486 ~~~~gi~~T~l~-pEtk~~~leei~~e~~~~ 515 (538)
T KOG0252|consen 486 CMLLGILFTLLI-PETKGKSLEEISNEEESN 515 (538)
T ss_pred HHHHhHheeEEe-ecccccCHHHhcChhhcc
Confidence 888887666665 699999999876555443
No 7
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=5.3e-34 Score=292.56 Aligned_cols=381 Identities=16% Similarity=0.174 Sum_probs=246.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcch-hhHH-----HHHHHHHHHH-----------------HHHHH
Q 011756 26 GLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSE-ESLI-----TTVVFAGMMS-----------------ILGGA 82 (478)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~-----~s~~~~G~~~-----------------~~~~~ 82 (478)
+.+.+.+.+|+++|++|...+++..|.+.++|+.+.++ .+++ .++.++|..+ +..+.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 56777888999999999999999999999999765533 2332 2333444332 67778
Q ss_pred HHHHHHHHHHhhhchHHH--------HHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 011756 83 LVTFVAGLLSAFSPNYIS--------LLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALA 153 (478)
Q Consensus 83 ~~~~i~~~~~~~a~~~~~--------l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~ 153 (478)
++++++++++++++|+.+ ++++|+++|+|.|+.. ...++++|++|+|+||+..++.+.+..+|.++++.+.
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999975 8999999999999874 5667899999999999999999988888888887665
Q ss_pred HHHh--------cCcchHHHHHHhhHHHHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q 011756 154 WIVM--------PILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTN 225 (478)
Q Consensus 154 ~~~~--------~~~~WR~~f~i~~i~~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 225 (478)
..+. +.+|||++|++.++++++.++.+.++||||+|+..+++.++..+ +
T Consensus 175 ~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~----------~------------- 231 (490)
T PRK10642 175 VLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDR----------E------------- 231 (490)
T ss_pred HHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhcc----------c-------------
Confidence 4332 36899999999887777666777889999998644332211000 0
Q ss_pred CcccccCCCCcccccccccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccc
Q 011756 226 DLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSIL 305 (478)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 305 (478)
...+ .+ + .++++++++ +++.....+...+.....+|+...+.|.+.....
T Consensus 232 ~~~~----~~---------------~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~------- 281 (490)
T PRK10642 232 GLQD----GP---------------K---VSFKEIATK-HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNL------- 281 (490)
T ss_pred cccc----cc---------------c---CCHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------
Confidence 0000 00 0 012223322 2333333333344455667777777766442110
Q ss_pred cccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH-HH--hhchhHHHHHHHHHHHHHhhh
Q 011756 306 LSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLP-LV--TLQSNILLTALLSGARMFSMG 382 (478)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~g 382 (478)
+.+............++.+++.++.++++||+|||+.+..+.....+.... +. ...+........+...++..+
T Consensus 282 ---g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 358 (490)
T PRK10642 282 ---HYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNC 358 (490)
T ss_pred ---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 111111122233445667788889999999999999877665433221111 11 111111111111111122222
Q ss_pred hhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHhccccccCccc
Q 011756 383 TFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-QTAAILLLEALIVLSVVVILLIPFETKGKEL 461 (478)
Q Consensus 383 ~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~-~~~~~~~~~~~~~i~~~~~~~~~pet~g~~l 461 (478)
..+....+.+|++|++.|+++.|+.+.++++++.++|.+.+.+.+..+ ...+..+...+++++.+..+ +.|||+++.+
T Consensus 359 ~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~-~~pes~~~~~ 437 (490)
T PRK10642 359 FTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGV-TMKETANRPL 437 (490)
T ss_pred HHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-HhccccCCCC
Confidence 334556777899999999999999999999999999999887766433 23344444555555555444 4589998766
Q ss_pred ch
Q 011756 462 VN 463 (478)
Q Consensus 462 ~~ 463 (478)
++
T Consensus 438 ~~ 439 (490)
T PRK10642 438 KG 439 (490)
T ss_pred CC
Confidence 54
No 8
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=8.9e-34 Score=290.78 Aligned_cols=406 Identities=21% Similarity=0.263 Sum_probs=266.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhc--------CCCcchhhHHHHHHHHHHHH----------------
Q 011756 22 GKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEW--------GLSSSEESLITTVVFAGMMS---------------- 77 (478)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~~~~~~~s~~~~G~~~---------------- 77 (478)
.++|.++.+.+.++.+.+++|...++...|.++++| ++++.+.+++.+.+++|..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~ 86 (479)
T PRK10077 7 SSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRD 86 (479)
T ss_pred chHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 578899999999999999999999999999988877 78888999999999887655
Q ss_pred -HHHHHHHHHHHHHHHhhh------------chHHHHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHH
Q 011756 78 -ILGGALVTFVAGLLSAFS------------PNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWT 143 (478)
Q Consensus 78 -~~~~~~~~~i~~~~~~~a------------~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 143 (478)
++.+.+++.++++.++++ +++..++++|+++|++.|... ...++++|++|+|+||+.+++.+.+..
T Consensus 87 ~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~ 166 (479)
T PRK10077 87 SLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAII 166 (479)
T ss_pred HHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHH
Confidence 445555666666665542 235778999999999999864 567789999999999999999999999
Q ss_pred HHHHHHHHHHHHHh--------cCcchHHHHHHhhHHHHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCC
Q 011756 144 FGSVSEAALAWIVM--------PILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLP 215 (478)
Q Consensus 144 ~G~~~~~~~~~~~~--------~~~~WR~~f~i~~i~~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~ 215 (478)
+|.++++.++..+. +.+|||++|++.+++.++..+..+++||||+|+..++|.|++++.+++..+.+..
T Consensus 167 ~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~--- 243 (479)
T PRK10077 167 FGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLA--- 243 (479)
T ss_pred HHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhH---
Confidence 99999887766542 3579999999999888887777888999999999999999888777665321100
Q ss_pred CCCCCCCCCCCcccccCCCCcccccccccccccccccccchhhcccCcchHHHHHHH-H-HHHHHHHHHHHHHHHHHHhh
Q 011756 216 SGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILL-W-VLYFGNSFVYYGIVLLASEL 293 (478)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~l 293 (478)
+...++. ... .+++ .+ .....+. +....... . ...+.....++....+.|.+
T Consensus 244 --------~~~~~~~---------~~~-~~~~--~~----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i 297 (479)
T PRK10077 244 --------TQALQEI---------KHS-LDHG--RK----TGGKLLM--FGVGVIVIGVMLSVFQQFVGINVVLYYAPEI 297 (479)
T ss_pred --------HHHHHHH---------HHH-HHHh--hh----hhhhhcc--hhHHHHHHHHHHHHHHHHhChhHHHHHHHHH
Confidence 0000000 000 0000 00 0000110 00111111 0 11111122223333344433
Q ss_pred hCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh---chhHHH-
Q 011756 294 SGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL---QSNILL- 369 (478)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~---~~~~~~- 369 (478)
....+ ..............+..+++.+++++++||+|||+.+..+..+.++..+.+... ......
T Consensus 298 ~~~~g-----------~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~ 366 (479)
T PRK10077 298 FKTLG-----------ASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVA 366 (479)
T ss_pred HHHcC-----------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHH
Confidence 21111 111111223334556678889999999999999999887776555443333211 111111
Q ss_pred -HHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHh------hccchhHHHHHHHHHH
Q 011756 370 -TALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV------TSCHQTAAILLLEALI 442 (478)
Q Consensus 370 -~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~------~~~~~~~~~~~~~~~~ 442 (478)
..+......+..+..+..+.+.+|.+|++.|+++.|+++.++++++++++.+.+.+. +..+....+.++++.+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (479)
T PRK10077 367 LLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMG 446 (479)
T ss_pred HHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHH
Confidence 111111111222222456899999999999999999999999999999988776443 2233345677777777
Q ss_pred HHHHHHHHhccccccCcccchhhcc
Q 011756 443 VLSVVVILLIPFETKGKELVNTIDG 467 (478)
Q Consensus 443 ~i~~~~~~~~~pet~g~~l~~~~~~ 467 (478)
+++.++.+++.||||+|+++|..++
T Consensus 447 ~~~~~~~~~~~~e~~~~~~~~~~~~ 471 (479)
T PRK10077 447 VLAALFMWKFVPETKGKTLEEMEAL 471 (479)
T ss_pred HHHHHHHHhccccCCCCCHHHHHHH
Confidence 7777777888899999998875443
No 9
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.1e-33 Score=291.30 Aligned_cols=411 Identities=23% Similarity=0.326 Sum_probs=279.9
Q ss_pred hHHHHHHHHHHHHHHHHHHH--HHHHHHhHHhhhhhcC-----CCc--chhhHHHHHHHHHHHH----------------
Q 011756 23 KFQGLALAYSGLGWFSEAME--VMILSFVGPAVKSEWG-----LSS--SEESLITTVVFAGMMS---------------- 77 (478)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----l~~--~~~~~~~s~~~~G~~~---------------- 77 (478)
+......+...++.+..++| ....+...+.++++.. .+. .+.+|+.++..+|..+
T Consensus 41 ~~~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~ 120 (513)
T KOG0254|consen 41 PFVILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKK 120 (513)
T ss_pred eehHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 45666667777777888887 4444555555555332 111 3448999998776544
Q ss_pred -HHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 011756 78 -ILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWI 155 (478)
Q Consensus 78 -~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~ 155 (478)
++.+.+++.++++++++++|+.+++++|+++|+|.|... +...|.+|++|++.||...+..+..+.+|.+++..++..
T Consensus 121 ~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~ 200 (513)
T KOG0254|consen 121 TLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYG 200 (513)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 677888999999999999999999999999999999864 566789999999999999999999999999998666655
Q ss_pred HhcC-cchHHHHHHhhHHHHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCC
Q 011756 156 VMPI-LTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTS 234 (478)
Q Consensus 156 ~~~~-~~WR~~f~i~~i~~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (478)
.... ++||.++++..+|+++..+..+++||||||+.++||.+||++.+++++..+..+ .+.+.++..
T Consensus 201 ~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~---------~~~~~~~~~--- 268 (513)
T KOG0254|consen 201 TSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPED---------VEVELELLK--- 268 (513)
T ss_pred hccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcc---------hHHHHHHHH---
Confidence 4322 589999999999999998888889999999999999999999999997532110 011111110
Q ss_pred CcccccccccccccccccccchhhcccCcchHHHHHHHHHHHHH------HHHHHHHHHHHHHhhhCCCCCccccccccc
Q 011756 235 EETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFG------NSFVYYGIVLLASELSGSQSKCSSSILLSE 308 (478)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 308 (478)
........... + .....++++++.+++..+...+... +...||...++.. .
T Consensus 269 --~~~~~~~~~~~---~--~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~-----~----------- 325 (513)
T KOG0254|consen 269 --IKLLVEAEVAE---G--KASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKS-----A----------- 325 (513)
T ss_pred --HHHHHhhhccc---c--cccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHh-----c-----------
Confidence 00000000000 0 0123445556666666654443332 2233454444321 0
Q ss_pred CccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh---h--ch-------hHHH-HHHHHH
Q 011756 309 NVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT---L--QS-------NILL-TALLSG 375 (478)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~---~--~~-------~~~~-~~~~~~ 375 (478)
+..+.. ....++..+..+++.+++.++.||+|||+.++.+.....++.+.+.. . .+ .+.. ......
T Consensus 326 g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (513)
T KOG0254|consen 326 GLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLF 404 (513)
T ss_pred CCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHH
Confidence 111111 33455666778888889999999999999998877655544433321 1 10 0111 111222
Q ss_pred HHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHH-HHHhccc
Q 011756 376 ARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVV-VILLIPF 454 (478)
Q Consensus 376 ~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~-~~~~~~p 454 (478)
...+..+..++.|.+.+|++|.+.|+++.+++..+++..+.+....+..+....+....+.++.+.+.+..+ .++++.|
T Consensus 405 v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~p 484 (513)
T KOG0254|consen 405 IFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVP 484 (513)
T ss_pred HHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcc
Confidence 223445566778999999999999999999999999998888777666555543224566677777777767 7888999
Q ss_pred cccCcccchhhcccc
Q 011756 455 ETKGKELVNTIDGVS 469 (478)
Q Consensus 455 et~g~~l~~~~~~~~ 469 (478)
||||++++|..+...
T Consensus 485 ETkg~sleei~~~~~ 499 (513)
T KOG0254|consen 485 ETKGLTLEEINELFE 499 (513)
T ss_pred cCCCCcHHHHHHHHH
Confidence 999999998766443
No 10
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=1.8e-40 Score=337.72 Aligned_cols=399 Identities=29% Similarity=0.493 Sum_probs=270.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhh--hhcCCCc---------chhhHHHHHHHHHHHH-----------------HHHHHH
Q 011756 32 SGLGWFSEAMEVMILSFVGPAVK--SEWGLSS---------SEESLITTVVFAGMMS-----------------ILGGAL 83 (478)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~---------~~~~~~~s~~~~G~~~-----------------~~~~~~ 83 (478)
+.++-+.+++|....+...+... .++..++ .+.+++.+..++|..+ ++.+.+
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~ 84 (451)
T PF00083_consen 5 ASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISAL 84 (451)
T ss_pred eHHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccc
Confidence 34556899999999988876654 2222222 2457788888877655 566777
Q ss_pred HHHHHHHHHhhhc---hHHHHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 011756 84 VTFVAGLLSAFSP---NYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPI 159 (478)
Q Consensus 84 ~~~i~~~~~~~a~---~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~ 159 (478)
+..+++++.++++ |+..+.++|++.|+|.|... ....|+.|..|+|+||+..+..+.++.+|.+++..++......
T Consensus 85 ~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 164 (451)
T PF00083_consen 85 LMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYY 164 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 8888999999999 99999999999999999864 5677899999999999999999999999999988887665333
Q ss_pred ---cchHHHHHHhhHHHHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCc
Q 011756 160 ---LTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEE 236 (478)
Q Consensus 160 ---~~WR~~f~i~~i~~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (478)
++||+.+.+.++|+++.++.+.++||||||+.+|||+|||++.++++++.+..+ + +.+++.++.++
T Consensus 165 ~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~---~--------~~~~~~~~~~~ 233 (451)
T PF00083_consen 165 SDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIED---E--------EIEEIKAEKKE 233 (451)
T ss_pred cccccccccccccccccccccccccccccccceeccccccccccccccccccccccc---c--------ccccccccccc
Confidence 459999999999999888888999999999999999999999998865332111 0 01111000000
Q ss_pred ccccccccccccccccccchhhcccCc-chHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhCCCCCcccccccccCccchh
Q 011756 237 TPLLSSARKRTTVRKSGFSSFLMLFSP-RFFKTTILLWVLYFGNSFVY-YGIVLLASELSGSQSKCSSSILLSENVQDAS 314 (478)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 314 (478)
.+ +.+ ...++++++ +++++......+........ +....+.+.+..... ..+.
T Consensus 234 ~~----------~~~---~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~-----------~~~~- 288 (451)
T PF00083_consen 234 SQ----------ESK---ASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAG-----------ISNS- 288 (451)
T ss_pred cc----------ccc---eeeeeccccccccccccccccccccccccccccccccccccccccc-----------cccc-
Confidence 00 000 123344443 23344433333222222111 122222222221111 0001
Q ss_pred hHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---h--hch----hHHHHHHHH-HHHHHhhhhh
Q 011756 315 VYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---T--LQS----NILLTALLS-GARMFSMGTF 384 (478)
Q Consensus 315 ~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~---~--~~~----~~~~~~~~~-~~~~~~~g~~ 384 (478)
.....+..+..+++.+++.+++||+|||+.+..+...++++.+.+. . ... ......... ...++..+..
T Consensus 289 -~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~ 367 (451)
T PF00083_consen 289 -FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWG 367 (451)
T ss_pred -cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeecccccccccc
Confidence 1222344455677788888999999999988877765554433332 1 111 111111111 1122333555
Q ss_pred hhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccccCcccchh
Q 011756 385 IIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELVNT 464 (478)
Q Consensus 385 ~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g~~l~~~ 464 (478)
+..+.+.+|+||+++|+++.|+++.+++++++++|.+.+.+.+..+....+.++++++++..++.+++.||||||+++|.
T Consensus 368 ~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei 447 (451)
T PF00083_consen 368 PLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEI 447 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHH
Confidence 67789999999999999999999999999999999987776665543566778888888888899999999999999987
Q ss_pred hcc
Q 011756 465 IDG 467 (478)
Q Consensus 465 ~~~ 467 (478)
.++
T Consensus 448 ~~~ 450 (451)
T PF00083_consen 448 QEM 450 (451)
T ss_pred Hhh
Confidence 653
No 11
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=4.5e-32 Score=280.71 Aligned_cols=370 Identities=32% Similarity=0.467 Sum_probs=264.5
Q ss_pred chhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCch-hhHHHHHh
Q 011756 62 SEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFM 123 (478)
Q Consensus 62 ~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~ 123 (478)
....+..+.+++|.++ ++.+.++..++++.+++++|++.+++.|+++|++.++. .+...++.
T Consensus 118 ~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~ 197 (521)
T KOG0255|consen 118 TLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVA 197 (521)
T ss_pred hHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhhe
Confidence 3456677888887666 66778888899999999999999999999999998776 46677889
Q ss_pred hccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHHHHHHhcCCCchhhhhcCChhHHHHHH
Q 011756 124 EFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNIL 203 (478)
Q Consensus 124 E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l 203 (478)
|+.++|+|+.+..+....+..|.+. +..+.++.+ +||+.+++..+|+.+.++.+++.||||||+..|||.|||.+.+
T Consensus 198 E~~~~~~R~~~~~~~~~~~~~~~~~-~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l 274 (521)
T KOG0255|consen 198 EIVSPKQRGLALTLGGFFFVGGLML-PAGAAYITR--DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDEAIKIL 274 (521)
T ss_pred eecCcchhhHHHHHHHHHHHHHHHH-HHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHHHHHHH
Confidence 9999999999999955555555444 444444433 9999999999999988777666779999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccccccccchhhcccC-cchHHHHHHHHHHHHHHHHH
Q 011756 204 DKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS-PRFFKTTILLWVLYFGNSFV 282 (478)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~ 282 (478)
++..+.|+++....+. .+... +.++ ++ .....+...+.++++ ++.++.++.+++.++.....
T Consensus 275 ~~~a~~n~~~~~~~~~-------~~~~~---~~~~------~~-~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~ 337 (521)
T KOG0255|consen 275 KKIAKLNGRKLSVKEL-------LRLEL---LLRP------LK-LLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLV 337 (521)
T ss_pred HHHHhhcCCCCCcHHH-------HHHHH---HhhH------hh-hhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHH
Confidence 9999877443221110 00000 0000 00 000011112444554 55778888888888888889
Q ss_pred HHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh
Q 011756 283 YYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT 362 (478)
Q Consensus 283 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~ 362 (478)
||+..+....+. .+.+.+..+......++....+...|+.|||..+..+.....+.++....
T Consensus 338 y~gl~~~~~~lg------------------~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~ 399 (521)
T KOG0255|consen 338 YYGLSLNVSGLG------------------GNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGW 399 (521)
T ss_pred HHhhhhhhhhcC------------------chHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 999877654322 23344555555678899999999999999999988887766655544443
Q ss_pred h-chhH--HHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHH
Q 011756 363 L-QSNI--LLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLE 439 (478)
Q Consensus 363 ~-~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~ 439 (478)
. .... ..........++....+...+.+.+|++|+.+|+.+.+.++.+++++++++|++...... ........+++
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~ 478 (521)
T KOG0255|consen 400 LPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFG 478 (521)
T ss_pred hhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHH
Confidence 2 2121 233333444444455566779999999999999999999999999999999987543322 22233333456
Q ss_pred HHHHHHHHHHHhccccccCcccchhhccccc
Q 011756 440 ALIVLSVVVILLIPFETKGKELVNTIDGVSN 470 (478)
Q Consensus 440 ~~~~i~~~~~~~~~pet~g~~l~~~~~~~~~ 470 (478)
....+.+++..++.|||++++++|+.++.++
T Consensus 479 ~~~~l~~~~~~~~lpet~~~~l~~t~~~~~~ 509 (521)
T KOG0255|consen 479 WLALLLGLLSLLLLPETKGKPLPGTLLDAEN 509 (521)
T ss_pred HHHHHHHHHHHhcCcccCCCCCchhHHHHHh
Confidence 6777777777778899999999998888875
No 12
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=2.6e-30 Score=261.35 Aligned_cols=369 Identities=19% Similarity=0.208 Sum_probs=231.3
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcC---CCcchhhHHHHHHHHHHH---H-----------------
Q 011756 21 FGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWG---LSSSEESLITTVVFAGMM---S----------------- 77 (478)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~s~~~~G~~---~----------------- 77 (478)
.+++++..+..+++|+++|++|+..+++..|.+.+||+ .++.+.+...+.+.++.. +
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~ 95 (432)
T PRK10406 16 DTRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKS 95 (432)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH
Confidence 34567777888889999999999999999999999985 444444444444433322 1
Q ss_pred HHHHHHHHHHHHHHHhhhchHH--------HHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHH
Q 011756 78 ILGGALVTFVAGLLSAFSPNYI--------SLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVS 148 (478)
Q Consensus 78 ~~~~~~~~~i~~~~~~~a~~~~--------~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~ 148 (478)
+..+.++++++++++++++|+. .++++|+++|+|.|+.. ...++++|++|+|+||+..++.+.+...|.++
T Consensus 96 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~ 175 (432)
T PRK10406 96 MLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLL 175 (432)
T ss_pred HHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHH
Confidence 5667788888999999999875 59999999999999864 56788999999999999999999888888888
Q ss_pred HHHHHHHHh--------cCcchHHHHHHhhHHHHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCC
Q 011756 149 EAALAWIVM--------PILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLT 220 (478)
Q Consensus 149 ~~~~~~~~~--------~~~~WR~~f~i~~i~~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~ 220 (478)
++.+...+. +.+|||++|++.++++++.++.+..+||||++..++ .+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~~-----------------~~-------- 230 (432)
T PRK10406 176 ALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRA-----------------LK-------- 230 (432)
T ss_pred HHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHhh-----------------hc--------
Confidence 776654432 367999999999999988777777899998742100 00
Q ss_pred CCCCCCcccccCCCCcccccccccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCc
Q 011756 221 SDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKC 300 (478)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 300 (478)
+. .+++++++. ++.........+.....+|+...|.|.+.....
T Consensus 231 --------------~~------------------~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~-- 274 (432)
T PRK10406 231 --------------EA------------------GSLKGLWRN--RRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTA-- 274 (432)
T ss_pred --------------cc------------------ccHHHHHhh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 00 011112221 122222222233334556777677665432110
Q ss_pred ccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH--hh-c-hhHHHHHHHHHH
Q 011756 301 SSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV--TL-Q-SNILLTALLSGA 376 (478)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~--~~-~-~~~~~~~~~~~~ 376 (478)
+.+.........+..+...++..+.|+++||+|||+.+..+..+.++....+. .. . +......+....
T Consensus 275 --------g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (432)
T PRK10406 275 --------GMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCA 346 (432)
T ss_pred --------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 11111111112233344556667789999999999977665443332222111 11 1 111111111111
Q ss_pred HHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhH-hHhHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHhccc
Q 011756 377 RMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRI-GGMVCPLVAVGLVTSCHQT-AAILLLEALIVLSVVVILLIPF 454 (478)
Q Consensus 377 ~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~l-g~~~~p~~~~~l~~~~~~~-~~~~~~~~~~~i~~~~~~~~~p 454 (478)
.+......+..+.+.+|.+|+++|+++.|++++++++ ++...|.+.. +++..+.. ..+++.+++.+++.+..++ .
T Consensus 347 ~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~-~l~~~g~~~~~~~~~~~~~~i~~~~~~~--l 423 (432)
T PRK10406 347 LLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVAL-SLKSIGMETAFFWYVTLMAVVAFLVSLM--L 423 (432)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHH-HHHHhCCCcHHHHHHHHHHHHHHHHHHH--h
Confidence 1111122244678889999999999999999999886 3445777666 44443422 3344445555565555554 3
Q ss_pred cccCccc
Q 011756 455 ETKGKEL 461 (478)
Q Consensus 455 et~g~~l 461 (478)
+++||+.
T Consensus 424 ~~~~~~~ 430 (432)
T PRK10406 424 HRKGKGM 430 (432)
T ss_pred hhccccc
Confidence 6677654
No 13
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=8.6e-30 Score=257.68 Aligned_cols=368 Identities=17% Similarity=0.180 Sum_probs=233.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHHh-hhhhc--CCCcchhhHHHHH-----HHHHH---------HH--------
Q 011756 23 KFQGLALAYSGLGWFSEAMEVMILSFVGPA-VKSEW--GLSSSEESLITTV-----VFAGM---------MS-------- 77 (478)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~l~~~~~~~~~s~-----~~~G~---------~~-------- 77 (478)
.+++++...+.+++++|++|+..+++..|. +.+++ ++++. .+++.+. .+++. +.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~ 96 (438)
T PRK09952 18 SRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRM 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHH
Confidence 566678888889999999999999998875 56666 56655 5665432 11111 11
Q ss_pred HHHHHHHHHHHHHHHhhhchHH--------HHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHH
Q 011756 78 ILGGALVTFVAGLLSAFSPNYI--------SLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVS 148 (478)
Q Consensus 78 ~~~~~~~~~i~~~~~~~a~~~~--------~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~ 148 (478)
+..+.+++.++++++++++|+. .++++|+++|++.|+.. ....+..|+.|+|+||+..+..+.++.+|.++
T Consensus 97 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l 176 (438)
T PRK09952 97 LMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLL 176 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 5667788888999999999987 58999999999999874 55678999999999999999999999999998
Q ss_pred HHHHHHHHh--------cCcchHHHHHHhhHHHHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCC
Q 011756 149 EAALAWIVM--------PILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLT 220 (478)
Q Consensus 149 ~~~~~~~~~--------~~~~WR~~f~i~~i~~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~ 220 (478)
++.+...+. ..+|||++|.+.+++.++.+..+..+||||+|..+++|.++.
T Consensus 177 ~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~~--------------------- 235 (438)
T PRK09952 177 STGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAAA--------------------- 235 (438)
T ss_pred HHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcccc---------------------
Confidence 877665443 257999999999988877666777899999875332111000
Q ss_pred CCCCCCcccccCCCCcccccccccccccccccccchhhccc-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCC
Q 011756 221 SDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSK 299 (478)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 299 (478)
+ ++.+ ..+.++ +++. ........+.....+|....|.|.+.....
T Consensus 236 -------~------~~~~-----------------~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~- 281 (438)
T PRK09952 236 -------K------KRIP-----------------VIEALLRHPGA---FLKIIALRLCELLTMYIVTAFALNYSTQNL- 281 (438)
T ss_pred -------c------ccCC-----------------HHHHHHHchHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 0 0000 000011 1211 122222233344445555555544321100
Q ss_pred cccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh---hchhH-HHHHHHHH
Q 011756 300 CSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT---LQSNI-LLTALLSG 375 (478)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~ 375 (478)
+.+.........+.....+++..+.++++||+|||+.+..+..+..+..+.... ..+.. ........
T Consensus 282 ---------g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 352 (438)
T PRK09952 282 ---------GLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIML 352 (438)
T ss_pred ---------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Confidence 011111111122334556677788999999999999877665444332222211 11111 11111122
Q ss_pred HHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHh-HhHhHHHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHHHhc
Q 011756 376 ARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGR-IGGMVCPLVAVGLVTSCH--QTAAILLLEALIVLSVVVILLI 452 (478)
Q Consensus 376 ~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~-lg~~~~p~~~~~l~~~~~--~~~~~~~~~~~~~i~~~~~~~~ 452 (478)
..+......+..+.+.+|.+|++.|+++.|+.+.+++ +++.++|.+.+.+.+..+ +...+.+.+++.+++.+..+.
T Consensus 353 ~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~- 431 (438)
T PRK09952 353 ANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALL- 431 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHH-
Confidence 2222223345678899999999999999999988877 789999999998876432 234455556666666655554
Q ss_pred cccc
Q 011756 453 PFET 456 (478)
Q Consensus 453 ~pet 456 (478)
.+||
T Consensus 432 ~~~~ 435 (438)
T PRK09952 432 MKDN 435 (438)
T ss_pred cccc
Confidence 4564
No 14
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=3e-30 Score=263.78 Aligned_cols=414 Identities=20% Similarity=0.278 Sum_probs=264.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCC--------cchhhHHHHHHHHHHHH-----------------
Q 011756 23 KFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLS--------SSEESLITTVVFAGMMS----------------- 77 (478)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--------~~~~~~~~s~~~~G~~~----------------- 77 (478)
+..+...+.+.++.+.+++|...++...|.+..+++.+ ..+.+++.+.+.++..+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~ 103 (481)
T TIGR00879 24 WKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKS 103 (481)
T ss_pred HHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHH
Confidence 33445556677788889999999999999988888776 78899999998877555
Q ss_pred HHHHHHHHHHHHHHHhh---hchHHHHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 011756 78 ILGGALVTFVAGLLSAF---SPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALA 153 (478)
Q Consensus 78 ~~~~~~~~~i~~~~~~~---a~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~ 153 (478)
++.+.+++.++.+++++ ..+++.++++|++.|+|.|... ....++.|++|+++|+++.++.+.+..+|.++++.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 104 LLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred HHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 45556666666666644 3445689999999999988764 4567899999999999999999999999999999988
Q ss_pred ---HHHhcCcchHHHHHHhhHHHHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccc
Q 011756 154 ---WIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEE 230 (478)
Q Consensus 154 ---~~~~~~~~WR~~f~i~~i~~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (478)
....+..+||+.|++.+++.++.++..+++||+|+++..+++.+++++..++....+.++ .+..+.
T Consensus 184 ~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 252 (481)
T TIGR00879 184 SGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGED-----------KELLDE 252 (481)
T ss_pred HHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCc-----------HHHHHH
Confidence 555567899999999887777777777889999999988888877766555442111000 000000
Q ss_pred cCCCCcccccccccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCc
Q 011756 231 FSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENV 310 (478)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 310 (478)
....+. ....++. ..+..+..+...+++..++..+.....++.....+.....+.|.+....+ .
T Consensus 253 ~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----------~ 316 (481)
T TIGR00879 253 LELIDI----KRSIEKR-SVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAG-----------V 316 (481)
T ss_pred HHHHHH----HHHHHHh-hccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcC-----------C
Confidence 000000 0000000 00000112222222111222222222222222212222233333221111 1
Q ss_pred cchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---hh-ch------hHHHH-HHHHHHHHH
Q 011756 311 QDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---TL-QS------NILLT-ALLSGARMF 379 (478)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~---~~-~~------~~~~~-~~~~~~~~~ 379 (478)
+............++.+++.+++++++||+|||+.+..+..+.++..+.+. .. .. ..... .......++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (481)
T TIGR00879 317 STDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFF 396 (481)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHH
Confidence 111112233445566788999999999999999988776555444333322 11 11 11111 111222222
Q ss_pred hhhhhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccccCc
Q 011756 380 SMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGK 459 (478)
Q Consensus 380 ~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g~ 459 (478)
..+..+..+.+.+|.+|++.|+++.|+.+...+++++++|.+.+.+.+..+....+.+++++++++.++.+++.||+|++
T Consensus 397 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 476 (481)
T TIGR00879 397 AMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGR 476 (481)
T ss_pred HccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCC
Confidence 33333556778899999999999999999999999999999988887765555667778888888888888888999988
Q ss_pred ccch
Q 011756 460 ELVN 463 (478)
Q Consensus 460 ~l~~ 463 (478)
+++|
T Consensus 477 ~~~~ 480 (481)
T TIGR00879 477 TLEE 480 (481)
T ss_pred Chhh
Confidence 7653
No 15
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=1.3e-29 Score=254.28 Aligned_cols=374 Identities=17% Similarity=0.238 Sum_probs=240.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHH
Q 011756 22 GKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALV 84 (478)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~ 84 (478)
.|.++.+...+++++++|++|+..+++..|.+++|+|+++++.|++.+.+++|..+ +..+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~ 82 (412)
T TIGR02332 3 KKLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVL 82 (412)
T ss_pred eeehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHH
Confidence 35678888899999999999999999999999999999999999999998877554 5566778
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhc-----
Q 011756 85 TFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP----- 158 (478)
Q Consensus 85 ~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~----- 158 (478)
++++++++++++|++++++.|++.|++.|... ....++.|++|+++||+.+++++.+..+|.++++.++..+.+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 162 (412)
T TIGR02332 83 WGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM 162 (412)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 88888899999999999999999999998864 455678999999999999999999999999999999877653
Q ss_pred -CcchHHHHHHhhHHHHHH-HHHHHhcCCCch---hhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCC
Q 011756 159 -ILTWRWLLALSAIPAFVL-LIFIVFMPESPR---YLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFST 233 (478)
Q Consensus 159 -~~~WR~~f~i~~i~~~l~-~~~~~~lpESP~---~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (478)
..|||+.|.+.++++++. ++.++++||+|+ |+.. +| ++..++..+.+..+ .++..+.
T Consensus 163 ~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~----~~-~~~~~~~~~~~~~~-------------~~~~~~~ 224 (412)
T TIGR02332 163 ALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDE----ED-KKALKEMIDNDQLT-------------LEQPEGA 224 (412)
T ss_pred CccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCH----HH-HHHHHHHHHhcccc-------------ccccccc
Confidence 369999999998888765 445667899995 3221 11 11111111111000 0000000
Q ss_pred CCcccccccccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccch
Q 011756 234 SEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDA 313 (478)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 313 (478)
.++++ ......++++++++. +.....+++....+++...|.|.+..+... ..+..
T Consensus 225 ~~~~~------------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~---------~~s~~ 279 (412)
T TIGR02332 225 FAHAA------------MPQRSMLREIFTPAI----MLYTLAYFCLTNTLSAINIWTPQILQSFNQ---------GSSNI 279 (412)
T ss_pred ccccc------------ccHHHHHHHhcChHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---------CCcHH
Confidence 00000 000011223333332 233334444555566666676665532110 01111
Q ss_pred hhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHH-HHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcc
Q 011756 314 SVYINVFITSFAELPGLLTAALLVDRVGRKLSM-TIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAP 392 (478)
Q Consensus 314 ~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 392 (478)
..........++.++|.++.++++||++||+.. ........+.........+............+......+..+....
T Consensus 280 ~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 359 (412)
T TIGR02332 280 MIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPD 359 (412)
T ss_pred HhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcc
Confidence 111223455677888999999999999977743 3322222222211111112211111111111111122233456667
Q ss_pred cccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccc-hhHHHHHH
Q 011756 393 EIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-QTAAILLL 438 (478)
Q Consensus 393 E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~-~~~~~~~~ 438 (478)
|.+|++.|+++.|+.+.++++|++++|.+.+.+.+..+ +...+.+.
T Consensus 360 ~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~ 406 (412)
T TIGR02332 360 QSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFV 406 (412)
T ss_pred cccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHH
Confidence 89999999999999999999999999999887776654 33344333
No 16
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.98 E-value=1.5e-30 Score=246.00 Aligned_cols=380 Identities=19% Similarity=0.292 Sum_probs=272.2
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHH
Q 011756 21 FGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGAL 83 (478)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~ 83 (478)
+.++|+.+++...+|+...++-|-.++++.|.+.+|.++|..|.|.+.|.+.+.+.+ +..+.+
T Consensus 23 y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLi 102 (448)
T COG2271 23 YKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLI 102 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHH
Confidence 568889999999999999999999999999999999999999999999999876555 566788
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHH--HHHhcCc
Q 011756 84 VTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALA--WIVMPIL 160 (478)
Q Consensus 84 ~~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~--~~~~~~~ 160 (478)
++.+..++.+++++...+.++-++.|..-|.+ ++....++.|+|+||||+..++++++.++|..+.+++. ..+..+.
T Consensus 103 lsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~ 182 (448)
T COG2271 103 LSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG 182 (448)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc
Confidence 88899999999999999999999999988876 45567789999999999999999999999999999888 7777788
Q ss_pred chHHHHHHhhHHHHHH-HHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccc
Q 011756 161 TWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPL 239 (478)
Q Consensus 161 ~WR~~f~i~~i~~~l~-~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (478)
+||..|++.++.++++ ++..+.++|+|+= .|-+.- ++..+ +..+.+. +|++
T Consensus 183 ~w~~~f~~pgiiaiival~~~~~~rd~Pqs---~GLP~i--------e~~~~-------------d~~e~~~--~~~~-- 234 (448)
T COG2271 183 GWRAAFYFPGIIAIIVALILLFLLRDRPQS---EGLPPI--------EEYRG-------------DPLEIYE--EEKE-- 234 (448)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhCCCccc---cCCCCH--------HHhhc-------------Cchhhhh--hhcc--
Confidence 9999999999888877 4556678888872 222110 00000 0000000 0000
Q ss_pred cccccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHH---HHHHHHHHhhhCCCCCcccccccccCccchhhH
Q 011756 240 LSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVY---YGIVLLASELSGSQSKCSSSILLSENVQDASVY 316 (478)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 316 (478)
+++ .+.++++.+-.. +.-.+|++.+++.+.| |++..|.|.+..+.. +.+..+..
T Consensus 235 -----------~~~-ls~~~i~~~YVL-~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k----------~~s~~~a~ 291 (448)
T COG2271 235 -----------NEG-LTAWQIFVKYVL-KNKLIWLLALANVFVYVVRYGINDWGPLYLSEVK----------GFSLVKAN 291 (448)
T ss_pred -----------CCC-ccHHHHHHHHHH-cChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhc----------CCCHHHHH
Confidence 000 011111111111 1113455555665555 888889887653321 12223333
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhh--chHHHHHHHHHH-HHHHHHHHHhhc--hhHHHHHHHHHHHHHhhhhhhhhhhhc
Q 011756 317 INVFITSFAELPGLLTAALLVDRV--GRKLSMTIMFIF-VCIFLLPLVTLQ--SNILLTALLSGARMFSMGTFIIANIFA 391 (478)
Q Consensus 317 ~~~~~~~~~~~~g~~~~~~l~dr~--GRr~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~ 391 (478)
....+...++++|++++||++||+ |||.++...+.+ ..+++..+.... +.....++++..+++..|+..+.....
T Consensus 292 ~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a 371 (448)
T COG2271 292 WAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAA 371 (448)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 455677889999999999999997 788776554333 333333332222 224455666667777788887888999
Q ss_pred ccccCcChhHHHHHHHHHHHhH-hHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHh
Q 011756 392 PEIYPTSMRSTGAGVAYAVGRI-GGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILL 451 (478)
Q Consensus 392 ~E~~p~~~R~~~~g~~~~~~~l-g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 451 (478)
.|+.|++..|++.|+...++++ |+..+....+.+.+..++.+.|.++.+.++++.+....
T Consensus 372 ~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~ 432 (448)
T COG2271 372 AEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLP 432 (448)
T ss_pred hccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 88888777776666666667777766666655544443
No 17
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.98 E-value=6e-29 Score=251.14 Aligned_cols=382 Identities=19% Similarity=0.244 Sum_probs=248.0
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHH
Q 011756 21 FGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGAL 83 (478)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~ 83 (478)
.+++|+..++.+.++++.|++|++..++..|.+++|+|+++.+.+++.+.+.+|..+ +..+.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~ 91 (426)
T PRK12307 12 ITRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIV 91 (426)
T ss_pred CCHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHH
Confidence 458899888999999999999999999999999999999999999999988777554 556677
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcch
Q 011756 84 VTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTW 162 (478)
Q Consensus 84 ~~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~W 162 (478)
+..++.++.++++++..++++|++.|+|.|... ....++.|++|+|+|+++.++...+..+|.++++.+...+.+..+|
T Consensus 92 ~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w 171 (426)
T PRK12307 92 AYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGW 171 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCH
Confidence 777888888999999999999999999988754 5567889999999999999999999999999999888777778899
Q ss_pred HHHHHHhhHHHHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCccccccc
Q 011756 163 RWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSS 242 (478)
Q Consensus 163 R~~f~i~~i~~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (478)
|+.|++..++.++.+......||++++..++.+. ++ ++. + ...+
T Consensus 172 ~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~---------------~~-------~~~-----~----~~~~----- 215 (426)
T PRK12307 172 RAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSG---------------KG-------KHS-----Q----SAWS----- 215 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhhc---------------cc-------ccc-----c----cchh-----
Confidence 9999987776665555555678887653211000 00 000 0 0000
Q ss_pred ccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHH
Q 011756 243 ARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFIT 322 (478)
Q Consensus 243 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (478)
....+.+++++++..+.........+.....++....+.|.+....+ .+...........
T Consensus 216 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----------~~~~~~~~~~~~~ 275 (426)
T PRK12307 216 ---------VFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEG-----------FDTGVVSNLMTAA 275 (426)
T ss_pred ---------hhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------CCHHHHHHHHHHH
Confidence 00011223333333222222222222212222223333333321111 1111111223344
Q ss_pred HhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh-chhHHHH-HHHHHHHHHhhhhhhhhhhhcccccCcChh
Q 011756 323 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL-QSNILLT-ALLSGARMFSMGTFIIANIFAPEIYPTSMR 400 (478)
Q Consensus 323 ~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R 400 (478)
.++.+++.++.+++.||+|||+.+..+..++.+..+..... .+..... ...+...+...+..+..+.+..|.+|++.|
T Consensus 276 ~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 355 (426)
T PRK12307 276 AFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVR 355 (426)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHH
Confidence 56778899999999999999998877665554433322221 1111111 112222122223334556778899999999
Q ss_pred HHHHHHHHHHHhHhHhHHHHHHHHHhhccchhH-HHHHHHHHHHHHHHHHHhccccccC
Q 011756 401 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTA-AILLLEALIVLSVVVILLIPFETKG 458 (478)
Q Consensus 401 ~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~-~~~~~~~~~~i~~~~~~~~~pet~g 458 (478)
+++.|+.+.++++++.++|.+.+.+.+..+... .++..++.+..+.....+..||+.+
T Consensus 356 g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (426)
T PRK12307 356 GLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFIVAFWTATILLIIGLSIPDRLK 414 (426)
T ss_pred hhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHhhccccCChhhh
Confidence 999999999999999999999888877665332 2333333333443333344566543
No 18
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.97 E-value=2.6e-28 Score=244.87 Aligned_cols=366 Identities=22% Similarity=0.321 Sum_probs=246.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHH
Q 011756 22 GKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALV 84 (478)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~ 84 (478)
.+++|.+++.+.+..+.|++|+...+...|.+.+|+++++++.+++.+...+|... +..+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 89 (406)
T PRK11551 10 SSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVAL 89 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 47999999999999999999999999999999999999999999999988776544 4455566
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchH
Q 011756 85 TFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWR 163 (478)
Q Consensus 85 ~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR 163 (478)
..++.++.++++|++.+++.|++.|++.|... ....++.|++|+++||+.+++.+.+..+|..+++.++..+.+..+||
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 169 (406)
T PRK11551 90 FGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWR 169 (406)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHH
Confidence 66777778889999999999999999888753 45678899999999999999999999999999999888777788999
Q ss_pred HHHHHhhHHHHHH-HHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCccccccc
Q 011756 164 WLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSS 242 (478)
Q Consensus 164 ~~f~i~~i~~~l~-~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (478)
+.|++.++..++. .+...++||+|++...+++.++.+ ..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-------------------------------------~~--- 209 (406)
T PRK11551 170 HIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRA-------------------------------------PV--- 209 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhh-------------------------------------hh---
Confidence 9999887655544 445567899987532211100000 00
Q ss_pred ccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHH
Q 011756 243 ARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFIT 322 (478)
Q Consensus 243 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (478)
.+..++++..+.....+..++.....++....+.|.+....+ .+...........
T Consensus 210 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g-----------~s~~~~~~~~~~~ 264 (406)
T PRK11551 210 --------------LRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVGQG-----------LSRSQAGLVQIAF 264 (406)
T ss_pred --------------HHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----------CChhhhhHHHHHH
Confidence 000111111112222233333333344445555554432211 1111111223444
Q ss_pred HhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHH
Q 011756 323 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 402 (478)
Q Consensus 323 ~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~ 402 (478)
.++.+++.++.+++.||+|||+.+..+.....+.........+.+......+...+...+..+..+.+.+|.+|++.|++
T Consensus 265 ~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~ 344 (406)
T PRK11551 265 NIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGT 344 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhh
Confidence 56788899999999999999998776554443333333322222222222222222333445667788899999999999
Q ss_pred HHHHHHHHHhHhHhHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHhc
Q 011756 403 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQT-AAILLLEALIVLSVVVILLI 452 (478)
Q Consensus 403 ~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~-~~~~~~~~~~~i~~~~~~~~ 452 (478)
+.|+.+.++++++.++|.+.+.+.+..+.. ..+.....+.+++.+..+..
T Consensus 345 ~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 345 GVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred hhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999887654332 23333444444444444443
No 19
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.97 E-value=2.6e-28 Score=240.39 Aligned_cols=335 Identities=18% Similarity=0.146 Sum_probs=220.9
Q ss_pred HHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH----------------HHHHHHHHHHHHHHH-hhhchHHHHHHHH
Q 011756 43 VMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS----------------ILGGALVTFVAGLLS-AFSPNYISLLILR 105 (478)
Q Consensus 43 ~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~----------------~~~~~~~~~i~~~~~-~~a~~~~~l~~~R 105 (478)
-...++..|.+++||++++++.|++.+.+++|+.+ +..+.+...+.+... ..++|+.+++++|
T Consensus 7 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R 86 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQ 86 (368)
T ss_pred HHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 34567789999999999999999999998887665 222222333233222 3337999999999
Q ss_pred HHhhcccCchhhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHHHH-HHHHHhcC
Q 011756 106 GLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMP 184 (478)
Q Consensus 106 ~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~l~-~~~~~~lp 184 (478)
+++|+|.|...+.....+|++|+|+|++++++.+.+..+|.++++.++..+.+++|||+.|.+.++++++. ++.++++|
T Consensus 87 ~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp 166 (368)
T TIGR00903 87 LLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALP 166 (368)
T ss_pred HHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999988654455567999999999999999999999999999999998888899999999977766554 55667899
Q ss_pred CCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccccccccchhhcccCcc
Q 011756 185 ESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPR 264 (478)
Q Consensus 185 ESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 264 (478)
|+|++.. +..+.++ . .+++++++++
T Consensus 167 ~~p~~~~---~~~~~~~-------------------------------------~--------------~~~~~~ll~~- 191 (368)
T TIGR00903 167 ALPFQAA---EGFGFKD-------------------------------------A--------------VKEFGALAGR- 191 (368)
T ss_pred CCCCCCC---CCcchHH-------------------------------------H--------------HHHHHHHHcC-
Confidence 9997521 0000000 0 0012223322
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchH-
Q 011756 265 FFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRK- 343 (478)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr- 343 (478)
+..+..+..+++....+|+...|.|.+....+ .+ .. ......+..+.|.+..++++||..||
T Consensus 192 --~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g-----------~s-~~---~~~~~~l~~~~g~~g~~~~~d~~~r~~ 254 (368)
T TIGR00903 192 --KDLWIIGAILGFGVALFDNLAIWLEAALRPAG-----------LE-DI---AGDAVALAILAGLIGVAVIPDRVARAG 254 (368)
T ss_pred --hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----------CC-hH---HHHHHHHHHHHHHHHHHHhhHHhhhhh
Confidence 22334445566667777888888887653211 11 11 11222333445556678888887653
Q ss_pred --HHHHH-HHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHH
Q 011756 344 --LSMTI-MFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPL 420 (478)
Q Consensus 344 --~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~ 420 (478)
+.... ...+.++.........+......+.....++..+.++..+.+.+|.+|++.|+++.|+.+..+++++..+|.
T Consensus 255 ~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~ 334 (368)
T TIGR00903 255 LRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALAL 334 (368)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHH
Confidence 33222 222222222222222222222223333334444555667889999999999999999999999999999999
Q ss_pred HHHHHhhccchhHHHHHHHHHHHHHHHHHHh
Q 011756 421 VAVGLVTSCHQTAAILLLEALIVLSVVVILL 451 (478)
Q Consensus 421 ~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 451 (478)
+.+.+.. +....+.+++++.+++.+.+++
T Consensus 335 ~~~~~~~--~~~~~f~~~~~~~~i~~~~~~~ 363 (368)
T TIGR00903 335 AAMLFIS--SAEAYFTFLAILITIAFAIALL 363 (368)
T ss_pred HHHHHhc--CHHHHHHHHHHHHHHHHHHHHh
Confidence 8877763 4445677778888887777653
No 20
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.97 E-value=4.7e-28 Score=242.54 Aligned_cols=366 Identities=19% Similarity=0.297 Sum_probs=241.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHH
Q 011756 21 FGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGAL 83 (478)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~ 83 (478)
.+++|++.+..+.++++.|++|+...+...|.+++++|+++.+.+++.+...++..+ ++.+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 468999999999999999999999999999999999999999999999988776544 455666
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcc-
Q 011756 84 VTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILT- 161 (478)
Q Consensus 84 ~~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~- 161 (478)
+..+++++.+++++++.+++.|++.|++.+... ....++.|++|+++|++..++.+.+..+|..+++.++..+.+..+
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~ 165 (405)
T TIGR00891 86 LFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGD 165 (405)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 777888888899999999999999999988764 556788999999999999999999999999999998887766655
Q ss_pred -hHHHHHHhhHHHHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCccccc
Q 011756 162 -WRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLL 240 (478)
Q Consensus 162 -WR~~f~i~~i~~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (478)
||+.|.+.+++.++.++....+||+|++..++++.++.++..++..+... ..+. ..+ ..
T Consensus 166 ~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~----~~~-~~- 225 (405)
T TIGR00891 166 GWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEH--------------RIAN----IVM-TL- 225 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccch--------------hhhh----hhh-hh-
Confidence 99999998888777777777899998875433322222221111110000 0000 000 00
Q ss_pred ccccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHH
Q 011756 241 SSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVF 320 (478)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (478)
....+. ..++.+.................++...+.|.+.... .+.+.........
T Consensus 226 -------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~g~s~~~~~~~~~ 281 (405)
T TIGR00891 226 -------------AAAMVQ-SAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKAD----------LGLSPHTVANIVV 281 (405)
T ss_pred -------------hHHhhh-hhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH----------hCCCHHHHHHHHH
Confidence 000000 0011111111122221222222222222222221100 0111111112234
Q ss_pred HHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH-HhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 321 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPL-VTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 321 ~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
...++.+++.++.+++.||+|||+.+..+...+.+..+.. ....+.+......+...++..+.++..+.+.+|.+|++.
T Consensus 282 ~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (405)
T TIGR00891 282 FSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ 361 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch
Confidence 4556788899999999999999998877665443322221 121222222222222223334445566788899999999
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHhhccc
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH 430 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~ 430 (478)
|+++.|+.+.++++++.++|.+.+.+.+..+
T Consensus 362 ~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g 392 (405)
T TIGR00891 362 RAAGLGFTYQLGNLGGALAPIIGALLAQRLD 392 (405)
T ss_pred hHHHhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999998887655
No 21
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.97 E-value=2.3e-28 Score=249.54 Aligned_cols=403 Identities=14% Similarity=0.132 Sum_probs=252.4
Q ss_pred cccccccHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-------
Q 011756 5 IQRLVYTLDEALTFMGFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS------- 77 (478)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~------- 77 (478)
.++|+.|+++...+..+.|+.+.++..+.+++++.+.|+..++...|.+++|+|+++++.|++.+.+++++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~ 86 (467)
T PRK09556 7 VRKPTLDLPLEVQRKMWFKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGY 86 (467)
T ss_pred cCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 4567788888777767788888999999999999999999999999999999999999999999999887655
Q ss_pred ----------HHHHHHHHHHHHHH-----HhhhchHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHH
Q 011756 78 ----------ILGGALVTFVAGLL-----SAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTF 141 (478)
Q Consensus 78 ----------~~~~~~~~~i~~~~-----~~~a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~ 141 (478)
+..+.++++++++. ++.++|++.+++.|++.|++.|.. +...+++.|++|+++||+++++++.+
T Consensus 87 l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~ 166 (467)
T PRK09556 87 YADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNIS 166 (467)
T ss_pred HhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecc
Confidence 23333444444333 344789999999999999988765 45567899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCc---chHHHHHHhhHHHHHHHH-HHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCC
Q 011756 142 WTFGSVSEAALAWIVMPIL---TWRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSG 217 (478)
Q Consensus 142 ~~~G~~~~~~~~~~~~~~~---~WR~~f~i~~i~~~l~~~-~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~ 217 (478)
..+|.++++.+...+.... +||..|.+.+++.++..+ .+++.+|+|+.. +..++ ++.. +..
T Consensus 167 ~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~---~~~~~-~~~~------~~~----- 231 (467)
T PRK09556 167 HNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEEL---GWGKA-EEIF------GEP----- 231 (467)
T ss_pred cchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhc---CCCCh-hhcc------cCc-----
Confidence 9999999988876554432 699999888877766544 444567777521 11111 0000 000
Q ss_pred CCCCCCCCCcccccCCCCcccccccccccccccccccchhh--cccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 011756 218 NLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFL--MLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSG 295 (478)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 295 (478)
.. ++. +..++++ ......+. .+.++. .+...+..+.....+++...|.|.+..
T Consensus 232 --~~------~~~-~~~~~~~------------~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~p~yl~ 286 (467)
T PRK09556 232 --IS------EED-KETESTD------------MTKWQIFVEYVLKNPV----IWLLCFANIFLYIVRIGIDNWSPVYAF 286 (467)
T ss_pred --cc------hhh-hcccccc------------CcHHHHHHHHHHcChH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000 0000000 00000001 111222 223333334444455666666664432
Q ss_pred CCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHH--HHHHhhchhHHHHHHH
Q 011756 296 SQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFL--LPLVTLQSNILLTALL 373 (478)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 373 (478)
.. .+.+............++.++|.+++|+++||+|||+..........+.. +......+........
T Consensus 287 ~~----------~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (467)
T PRK09556 287 QE----------LGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASL 356 (467)
T ss_pred Hc----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 11 01111111122334556788999999999999999986654432222211 1111111222221222
Q ss_pred HHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhH-hHhHHHHHHHHHhh------------ccchhHHHHHHHH
Q 011756 374 SGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRI-GGMVCPLVAVGLVT------------SCHQTAAILLLEA 440 (478)
Q Consensus 374 ~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~l-g~~~~p~~~~~l~~------------~~~~~~~~~~~~~ 440 (478)
+...++..++....+....|.+|++.|+++.|+.+.++++ |++++|.+.+.+.+ ..++...+.++.+
T Consensus 357 ~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~ 436 (467)
T PRK09556 357 FALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDI 436 (467)
T ss_pred HHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHH
Confidence 2222222333333345667999999999999999999997 66899999998888 3344556666767
Q ss_pred HHHHHHHHHHhcc-cccc
Q 011756 441 LIVLSVVVILLIP-FETK 457 (478)
Q Consensus 441 ~~~i~~~~~~~~~-pet~ 457 (478)
+.+++.+..++.. .|+|
T Consensus 437 ~~~~~~~~~~~~~~~~~~ 454 (467)
T PRK09556 437 AAIGCICLMAIVAVMEER 454 (467)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 7777665555442 3443
No 22
>TIGR00895 2A0115 benzoate transport.
Probab=99.97 E-value=4.6e-27 Score=234.58 Aligned_cols=377 Identities=27% Similarity=0.399 Sum_probs=251.2
Q ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH--------------
Q 011756 12 LDEALTFMGFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-------------- 77 (478)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-------------- 77 (478)
+++..+....+++++..++.+.+.++.++++....++..|.+.+++|.++.+.+++.+...++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~ 81 (398)
T TIGR00895 2 VQNNIRKQPLSRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGR 81 (398)
T ss_pred hhhHHhhCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhh
Confidence 345555556678888888888889999999999999999999999999999999998887665444
Q ss_pred ---HHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 011756 78 ---ILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALA 153 (478)
Q Consensus 78 ---~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~ 153 (478)
+..+.++..++.++.+++++++.+++.|++.|++.|.. +...+++.|++|+++|++..++.+.+..+|..+++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 161 (398)
T TIGR00895 82 KRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLA 161 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHH
Confidence 44455566677777788899999999999999998875 45667899999999999999999999999999999999
Q ss_pred HHHhcCcchHHHHHHhhH-HHHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccC
Q 011756 154 WIVMPILTWRWLLALSAI-PAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFS 232 (478)
Q Consensus 154 ~~~~~~~~WR~~f~i~~i-~~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (478)
..+.+..+||+.|.+.++ ..+...+...++||+|++..++ +++++++..++....+..+. +.+..+
T Consensus 162 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~~~--- 228 (398)
T TIGR00895 162 GWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEA---------QSALPE--- 228 (398)
T ss_pred HHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhccccc---------cccccc---
Confidence 888888899999998864 4444455677799999987665 55555555554432221100 000000
Q ss_pred CCCcccccccccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccc
Q 011756 233 TSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQD 312 (478)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 312 (478)
+++ +++ ..+ ...+.+++++..+.....+...+.....+++...+.|.+....+ .+.
T Consensus 229 --~~~-------~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----------~~~ 284 (398)
T TIGR00895 229 --QKA-------TQG-TKR---SVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELG-----------FSL 284 (398)
T ss_pred --ccc-------ccc-hhh---HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------CCH
Confidence 000 000 000 01222334444444444444444444555555555554332111 111
Q ss_pred hhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcc
Q 011756 313 ASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAP 392 (478)
Q Consensus 313 ~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 392 (478)
...........++.+++.++.+++.||+|||+.............+......+........+...++..+..+..+.+.+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 364 (398)
T TIGR00895 285 SLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMA 364 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11112234555678889999999999999995444333222222222111222222222222333333344566788999
Q ss_pred cccCcChhHHHHHHHHHHHhHhHhHHHHHHHHH
Q 011756 393 EIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGL 425 (478)
Q Consensus 393 E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l 425 (478)
|.+|++.|+++.|+.+.++++|+.++|.+.+.+
T Consensus 365 ~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 365 LFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 999999999999999999999999999987754
No 23
>PRK15075 citrate-proton symporter; Provisional
Probab=99.97 E-value=6.1e-27 Score=236.86 Aligned_cols=370 Identities=18% Similarity=0.237 Sum_probs=224.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHH-HHH--HHH------------HHH--------HH
Q 011756 23 KFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLIT-TVV--FAG------------MMS--------IL 79 (478)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-s~~--~~G------------~~~--------~~ 79 (478)
..+++....+.+++++|++|+..+++..|.+++|+++++.+.+.+. +.. ..+ ... ++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~ 90 (434)
T PRK15075 11 ESKARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLI 90 (434)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHH
Confidence 3455577788899999999999999999999999999888765443 221 111 111 56
Q ss_pred HHHHHHHHHHHHHhhhchHH--------HHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHH
Q 011756 80 GGALVTFVAGLLSAFSPNYI--------SLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEA 150 (478)
Q Consensus 80 ~~~~~~~i~~~~~~~a~~~~--------~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~ 150 (478)
.+.+++.++++++++++|+. .++++|+++|++.|... ....++.|++|+++||+.+++...+..+|..+++
T Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~ 170 (434)
T PRK15075 91 VTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAA 170 (434)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHH
Confidence 67777888888999999987 46999999999998764 4567899999999999999999988888888777
Q ss_pred HHHHHH--------hcCcchHHHHHHhhHHHHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCC
Q 011756 151 ALAWIV--------MPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSD 222 (478)
Q Consensus 151 ~~~~~~--------~~~~~WR~~f~i~~i~~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 222 (478)
.++..+ .+.+|||++|++..++..+.+..+...||++++..++++
T Consensus 171 ~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--------------------------- 223 (434)
T PRK15075 171 LLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARKHR--------------------------- 223 (434)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhc---------------------------
Confidence 776654 246799999998766544444444456665433110000
Q ss_pred CCCCcccccCCCCcccccccccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCccc
Q 011756 223 GTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSS 302 (478)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 302 (478)
. +.++ .++.. .+.++.........+.....+++...|.|.+..+..
T Consensus 224 ------~-----~~~~-----------------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~---- 269 (434)
T PRK15075 224 ------P-----SMRE-----------------IFRSL--AANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVL---- 269 (434)
T ss_pred ------c-----cccc-----------------HHHHH--HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----
Confidence 0 0000 00000 011112222222223334445556666665432110
Q ss_pred ccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH-H-Hh-hchhH-HHHHHHHHHHH
Q 011756 303 SILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLP-L-VT-LQSNI-LLTALLSGARM 378 (478)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~-~-~~-~~~~~-~~~~~~~~~~~ 378 (478)
+.+............++.+++.+++|+++||+|||+....+........+. . .. ..+.. ..........+
T Consensus 270 ------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (434)
T PRK15075 270 ------HLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSF 343 (434)
T ss_pred ------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Confidence 111111122234455667888999999999999999877654333221111 1 11 11111 11111111111
Q ss_pred HhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhH-hHhHHHHHHHHHhhccchhH--H-HHHHHHHHHHHHHHHHhccc
Q 011756 379 FSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRI-GGMVCPLVAVGLVTSCHQTA--A-ILLLEALIVLSVVVILLIPF 454 (478)
Q Consensus 379 ~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~l-g~~~~p~~~~~l~~~~~~~~--~-~~~~~~~~~i~~~~~~~~~p 454 (478)
+.....+..+.+.+|.+|++.|+++.|+.+++++. ++.++|.+.+.+.+..+... . +.+++. +.+ .+..+...
T Consensus 344 ~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~~~~~~~~~~~~--~~~-~~~~~~~~ 420 (434)
T PRK15075 344 LYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDKAAPGYWLSFAA--VCG-LIATLVLY 420 (434)
T ss_pred HHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCchHHHHHHHHHH--HHH-HHHHHHhc
Confidence 11122334567889999999999999998888886 58889999888877655321 2 222222 222 23334445
Q ss_pred cccCcccc
Q 011756 455 ETKGKELV 462 (478)
Q Consensus 455 et~g~~l~ 462 (478)
+.+|.+++
T Consensus 421 ~~~~~~~~ 428 (434)
T PRK15075 421 RRRGARLQ 428 (434)
T ss_pred cccchhhh
Confidence 66666654
No 24
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.96 E-value=7.8e-27 Score=236.00 Aligned_cols=388 Identities=16% Similarity=0.160 Sum_probs=246.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHH
Q 011756 22 GKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALV 84 (478)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~ 84 (478)
.++++.++..+.++++.+.+|+...+...|.+.+++|+++++.|++.+.+.++..+ +..+.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~ 97 (434)
T PRK11663 18 RYWRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIA 97 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHH
Confidence 35666777778899999999999999999999999999999999999988777554 5566677
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchH
Q 011756 85 TFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWR 163 (478)
Q Consensus 85 ~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR 163 (478)
+.++.++.++++|++.+++.|++.|++.|.. +....++.|++|+++||+.+++.+.+..+|..+++.+...+.+.+|||
T Consensus 98 ~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~ 177 (434)
T PRK11663 98 TGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWR 177 (434)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHH
Confidence 7778888889999999999999999988765 455678899999999999999999999999999999888888889999
Q ss_pred HHHHHhhHHHHHH-HHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCccccccc
Q 011756 164 WLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSS 242 (478)
Q Consensus 164 ~~f~i~~i~~~l~-~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (478)
+.|.+.+++.++. ++..+++||+|++.....+.++. ++.+ + .+++.
T Consensus 178 ~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~---------------------~~~~---~-----~~~~~---- 224 (434)
T PRK11663 178 YGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWR---------------------HDAL---E-----LAQQQ---- 224 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCccccc---------------------cccc---c-----cchhc----
Confidence 9999988776654 44556789988753111000000 0000 0 00000
Q ss_pred ccccccccccccch-hh-cccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHH
Q 011756 243 ARKRTTVRKSGFSS-FL-MLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVF 320 (478)
Q Consensus 243 ~~~~~~~~~~~~~~-~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (478)
+++ +.+.++ ++ ..++. ++.+......+.....+++...|.|.+..... +.+.........
T Consensus 225 -~~~----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~----------g~s~~~a~~~~~ 286 (434)
T PRK11663 225 -EGA----GLSRKEILTKYVLLN---PYIWLLSFSYVLVYVVRAAINDWGNLYMSETL----------GVDLVTANSAVS 286 (434)
T ss_pred -ccc----CCChhhhHHHHHhcC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------CCCHHHHHHHHH
Confidence 000 000000 00 01111 11222222233333444555555554432110 111111112233
Q ss_pred HHHhhhhhHHHHHHHHHhhh--chH-HHHHHHHH--HHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 011756 321 ITSFAELPGLLTAALLVDRV--GRK-LSMTIMFI--FVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIY 395 (478)
Q Consensus 321 ~~~~~~~~g~~~~~~l~dr~--GRr-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~ 395 (478)
...++.++|.++.++++||+ +|| ........ ......+......+........+...++..++........+|.+
T Consensus 287 ~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 366 (434)
T PRK11663 287 MFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECS 366 (434)
T ss_pred HHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcc
Confidence 44567889999999999999 333 32221111 11111111111111111111222222222233333456678999
Q ss_pred CcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccccCcc
Q 011756 396 PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKE 460 (478)
Q Consensus 396 p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g~~ 460 (478)
|++.|+++.|+.+..+++|+.++|.+.+.+.+..+....+...+++.+++.+..+.+.++.++++
T Consensus 367 ~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (434)
T PRK11663 367 HKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLNAQAPRE 431 (434)
T ss_pred cHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhhchhc
Confidence 99999999999999999999999999998888766666777777777777766666665555543
No 25
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.96 E-value=7.5e-26 Score=233.13 Aligned_cols=408 Identities=18% Similarity=0.276 Sum_probs=245.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHH
Q 011756 22 GKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALV 84 (478)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~ 84 (478)
++++++.+..++++++.+++|....+...|.+.+++|+++.+.+++.+.+.+|..+ +..+.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 94 (496)
T PRK03893 15 NRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVL 94 (496)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 47888888899999999999999999999999999999999999999988776544 4556666
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchH
Q 011756 85 TFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWR 163 (478)
Q Consensus 85 ~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR 163 (478)
..++.++.++++|++.+++.|++.|++.+.. .....++.|.+|+++|++..+....++.+|..+++.+...+.+..+||
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~ 174 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWR 174 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 7777888889999999999999999988775 455678899999999999999999999999999999998888889999
Q ss_pred HHHHHhhHHHHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccc
Q 011756 164 WLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSA 243 (478)
Q Consensus 164 ~~f~i~~i~~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (478)
+.|++..++.++.++.+..+||++++...+++.++.++..+...+.+.+ .. ...............
T Consensus 175 ~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~-~~~~~~~~~~~~~~~ 240 (496)
T PRK03893 175 ALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHR-------------II-NILLTLAAAAALWFC 240 (496)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhH-------------HH-HHHHHHHHHHHHHHH
Confidence 9999877777666666777899987644322222111111111000000 00 000000000000000
Q ss_pred ccccccccccc-------------chhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCc
Q 011756 244 RKRTTVRKSGF-------------SSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENV 310 (478)
Q Consensus 244 ~~~~~~~~~~~-------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 310 (478)
.... ..... ..+.....++.+..........+......++...+.|.+.... .+.
T Consensus 241 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~----------~g~ 308 (496)
T PRK03893 241 FAGN--LQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTD----------LGY 308 (496)
T ss_pred HHhh--hcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhh----------cCC
Confidence 0000 00000 0000000000111111111111111111112223333332111 011
Q ss_pred cchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh-chh-HHHHHHHHHHHHHhhhhhhhhh
Q 011756 311 QDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL-QSN-ILLTALLSGARMFSMGTFIIAN 388 (478)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~g~~~~~~ 388 (478)
+............++.++|.++.++++||+|||+.+..+..+..+..+..... ... +......+...+...+.....+
T Consensus 309 ~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (496)
T PRK03893 309 DPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLP 388 (496)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhH
Confidence 11112223344556778899999999999999998776655444333222221 111 1111222222222233344566
Q ss_pred hhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHH-HHHHHHHHHhcccc
Q 011756 389 IFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEAL-IVLSVVVILLIPFE 455 (478)
Q Consensus 389 ~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~-~~i~~~~~~~~~pe 455 (478)
.+.+|.+|.+.|+++.|+.+.++.+|+.++|.+.+.+.+..+....+...+++ .+.+.+...+..|+
T Consensus 389 ~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (496)
T PRK03893 389 KLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTFVVILLIGLDMPS 456 (496)
T ss_pred HHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHhcCcH
Confidence 78889999999999999999999999999999988887766544444443333 33333333344443
No 26
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.95 E-value=1.4e-24 Score=220.70 Aligned_cols=403 Identities=14% Similarity=0.184 Sum_probs=237.3
Q ss_pred ccHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH------------
Q 011756 10 YTLDEALTFMGFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS------------ 77 (478)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~------------ 77 (478)
.--++.+|.. ..+++|.++..+.+++.....|+..+++..|.+.++ ++++.+.+++.+.+.++..+
T Consensus 13 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~ 90 (452)
T PRK11273 13 RLPAAEIDPT-YRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS 90 (452)
T ss_pred cCChHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc
Confidence 3334455543 456677777777788888999999899999999988 99999999999998877555
Q ss_pred -----HHHHHHHHHHHHHHHhhh----chHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHH
Q 011756 78 -----ILGGALVTFVAGLLSAFS----PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSV 147 (478)
Q Consensus 78 -----~~~~~~~~~i~~~~~~~a----~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~ 147 (478)
++.+.+++.++.++.+++ .++..+++.|++.|++.|.. +.....+.|++|+++||+.+++++.+..+|..
T Consensus 91 g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 170 (452)
T PRK11273 91 NPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGG 170 (452)
T ss_pred CCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhh
Confidence 455666666666666654 37888999999999988765 34456678999999999999999999988864
Q ss_pred H-HHHHHHHHhcCcchHHHHHHhhHHHHHH-HHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q 011756 148 S-EAALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTN 225 (478)
Q Consensus 148 ~-~~~~~~~~~~~~~WR~~f~i~~i~~~l~-~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 225 (478)
+ ++++...+....+||+.|++.+++.++. ++..+++||+|+....+.+ +|.+ + +.+ ++
T Consensus 171 ~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~---------~--~~~-----~~--- 230 (452)
T PRK11273 171 LPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPI-EEYK---------N--DYP-----DD--- 230 (452)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCCh-hhhh---------h--ccc-----cc---
Confidence 4 4444333333459999999988776665 4556778999874211111 0100 0 000 00
Q ss_pred CcccccCCCCcccccccccccccccccccch-hh-cccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccc
Q 011756 226 DLDEEFSTSEETPLLSSARKRTTVRKSGFSS-FL-MLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSS 303 (478)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 303 (478)
.++ +.++ +.+..+ +. ..++.+ ..+...+..+.....+++...+.|.+.....
T Consensus 231 -~~~---~~~~--------------~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~----- 284 (452)
T PRK11273 231 -YNE---KHEQ--------------ELTAKQIFMQYVLPNK---LLWYIAIANVFVYLLRYGILDWSPTYLKEVK----- 284 (452)
T ss_pred -ccc---ccCC--------------CccHHHHHHHHHHcCh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----
Confidence 000 0000 000000 00 111111 1122222222233344555555555442211
Q ss_pred cccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhh--chHHHHHH-HHHHHHHHHHHHHh--hchhHHHHHHHHHHHH
Q 011756 304 ILLSENVQDASVYINVFITSFAELPGLLTAALLVDRV--GRKLSMTI-MFIFVCIFLLPLVT--LQSNILLTALLSGARM 378 (478)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~--GRr~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 378 (478)
+...........+..++.+++.+++|+++||+ |||..... ......+....+.. ..+........+....
T Consensus 285 -----g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 359 (452)
T PRK11273 285 -----HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGF 359 (452)
T ss_pred -----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHH
Confidence 01111111223344567788999999999999 55543222 11111111111111 1111111121222222
Q ss_pred HhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhH-HHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHh-ccccc
Q 011756 379 FSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMV-CPLVAVGLVTSCHQTAAILLLEALIVLSVVVILL-IPFET 456 (478)
Q Consensus 379 ~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~-~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~-~~pet 456 (478)
...++......+..|.+|++.|+++.|+.+..+++|+.+ +|.+.+.+.+..+....+.+.+++++++.+.... ..+|+
T Consensus 360 ~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 439 (452)
T PRK11273 360 LIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 439 (452)
T ss_pred HHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 222333334456779999999999999999999998765 7888888887766666677777777766655553 34555
Q ss_pred cCcccchhhcc
Q 011756 457 KGKELVNTIDG 467 (478)
Q Consensus 457 ~g~~l~~~~~~ 467 (478)
|++ ||..++
T Consensus 440 ~~~--~~~~~~ 448 (452)
T PRK11273 440 RHH--EELLQK 448 (452)
T ss_pred chH--HHHHhh
Confidence 443 444443
No 27
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.95 E-value=4.5e-25 Score=219.62 Aligned_cols=367 Identities=17% Similarity=0.222 Sum_probs=227.0
Q ss_pred HHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhchH
Q 011756 36 WFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFSPNY 98 (478)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a~~~ 98 (478)
+..+.+|+..++...|.+++++|+++.+.+++.+...++..+ +..+.++..++.++.++++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 82 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAY 82 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCH
Confidence 567889999999999999999999999999999988776554 455666777778888899999
Q ss_pred HHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHH
Q 011756 99 ISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLL 177 (478)
Q Consensus 99 ~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~l~~ 177 (478)
+.++++|++.|++.|.. +....++.|+.|+++|++..++.+....+|.++++.++..+.+..+||+.|.+.++..++..
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 162 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWG 162 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 99999999999998775 45567899999999999999999999999999999999888888899999999887776654
Q ss_pred H-HHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccccccccch
Q 011756 178 I-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSS 256 (478)
Q Consensus 178 ~-~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (478)
+ ...+.||+|+.. +...++.++...+ + ...+ .++ .+++ +....+
T Consensus 163 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~-------~-----~~~~----~~~----~~~~-------------~~~~~~ 207 (399)
T TIGR00893 163 VLWLKFIPDPPQKA--KWLTEEEKYIVVG-------G-----LLAE----QQG----KGPS-------------TPKKYQ 207 (399)
T ss_pred HHhhheecCCCCcc--ccCCHHHHhhcch-------h-----hccc----ccc----cccc-------------CCCccc
Confidence 4 344567776421 1111111100000 0 0000 000 0000 000011
Q ss_pred hhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHH
Q 011756 257 FLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALL 336 (478)
Q Consensus 257 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l 336 (478)
.++.++++ +.+......+.....++....+.|.+..... +.+............++.+++.++.+++
T Consensus 208 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 274 (399)
T TIGR00893 208 IKELLKDR---RVWGLALGQFLVNIGLGFFLTWFPTYLVQER----------GLSILEAGFMASLPGIVGFIGMILGGRL 274 (399)
T ss_pred hHHHhcCH---HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHh----------cccHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 22222221 1122222222223333333333333221100 0111111122344456678899999999
Q ss_pred HhhhchHH--HHHHHH-HHHH-H--HHHHHHhh-chhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHH
Q 011756 337 VDRVGRKL--SMTIMF-IFVC-I--FLLPLVTL-QSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYA 409 (478)
Q Consensus 337 ~dr~GRr~--~~~~~~-~~~~-~--~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~ 409 (478)
.||+|||+ ...... ...+ . ........ .+............++..+..+..+.+.+|.+|++.|+++.|+.+.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 354 (399)
T TIGR00893 275 SDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINS 354 (399)
T ss_pred HHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHH
Confidence 99999996 111111 1111 1 11111111 1111111112222222333466778999999999999999999999
Q ss_pred HHhHhHhHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHH
Q 011756 410 VGRIGGMVCPLVAVGLVTSCH-QTAAILLLEALIVLSVVVIL 450 (478)
Q Consensus 410 ~~~lg~~~~p~~~~~l~~~~~-~~~~~~~~~~~~~i~~~~~~ 450 (478)
+.++|+.++|.+.+.+.+..+ ....+.+.+++.+++.+..+
T Consensus 355 ~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 355 LGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 999999999999998877665 44556666666666555444
No 28
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.95 E-value=1.1e-24 Score=222.44 Aligned_cols=378 Identities=15% Similarity=0.161 Sum_probs=233.0
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhh----------------------hcCCCcchhhHHHHHHHHHHHH-
Q 011756 21 FGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKS----------------------EWGLSSSEESLITTVVFAGMMS- 77 (478)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~l~~~~~~~~~s~~~~G~~~- 77 (478)
.++.++.+...+.+++.+++.|+..++++.|.+++ |+++++.+.|++.+.+.+|..+
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIII 92 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHH
Confidence 56788888888999999999999999999887766 7889999999999999887665
Q ss_pred ----------------HHHHHHHHHHHHHHHhh--hchHHHHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHH
Q 011756 78 ----------------ILGGALVTFVAGLLSAF--SPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVF 138 (478)
Q Consensus 78 ----------------~~~~~~~~~i~~~~~~~--a~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~ 138 (478)
+..+.+++++++++..+ .+++..+++.|+++|++.|... ....++.|+.|+++||+.+++.
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 172 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMS 172 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHH
Confidence 44455566666665543 3568889999999999998864 5667899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcC-cchHHHHHHhhHHHHHHHHH-HHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCC
Q 011756 139 STFWTFGSVSEAALAWIVMPI-LTWRWLLALSAIPAFVLLIF-IVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPS 216 (478)
Q Consensus 139 ~~~~~~G~~~~~~~~~~~~~~-~~WR~~f~i~~i~~~l~~~~-~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~ 216 (478)
..+..+|.+++++++..+.+. .+||+.|.+.++++++..+. ..+.||+|+.. .+.++.++ +.+.+...
T Consensus 173 ~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~---~~~~~~~~--~~i~~~~~----- 242 (465)
T TIGR00894 173 TSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIH---PCISKFEK--KYINSSLQ----- 242 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccC---CCCCHHHH--HHHHhhcc-----
Confidence 999999999999998888777 49999999999888776554 44567888632 11111111 11110000
Q ss_pred CCCCCCCCCCcccccCCCCcccccccccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCC
Q 011756 217 GNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGS 296 (478)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 296 (478)
+.. .+. ..+ .++++.++.+ ..+......++....++....|.|.+...
T Consensus 243 ------------~~~--~~~------------~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~lp~~l~~ 290 (465)
T TIGR00894 243 ------------GQK--GST------------RQS---LPIKAIPKSL---PVWAIWFAIFGHFWLYTILPTYLPTFISW 290 (465)
T ss_pred ------------ccc--CCC------------CCC---CCHHHHhcCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 000 000 0122222221 22233333444444555555565544321
Q ss_pred CCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHH--------HHHH--HHHHHHHHHHHh-hch
Q 011756 297 QSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSM--------TIMF--IFVCIFLLPLVT-LQS 365 (478)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~--------~~~~--~~~~~~~~~~~~-~~~ 365 (478)
.. +.+.........+..++.+++.+++|+++||++||+.. ..+. ...++..+.... ..+
T Consensus 291 ~~----------g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (465)
T TIGR00894 291 VL----------RVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAA 360 (465)
T ss_pred Hh----------CcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 10 01111111122344566788899999999998755211 1111 111111111111 111
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhcc--c-hhHHHHHHHHHH
Q 011756 366 NILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC--H-QTAAILLLEALI 442 (478)
Q Consensus 366 ~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~--~-~~~~~~~~~~~~ 442 (478)
.......+....++..+.....+....|..|. .+|++.|+.+..+.++++++|.+.+.+.+.. + ....+.+.++..
T Consensus 361 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~ 439 (465)
T TIGR00894 361 FYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVN 439 (465)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHH
Confidence 22222222222222222333344555677765 8999999999999999999999988776542 2 234556666666
Q ss_pred HHHHHHHHh
Q 011756 443 VLSVVVILL 451 (478)
Q Consensus 443 ~i~~~~~~~ 451 (478)
+++.++..+
T Consensus 440 ~i~~i~~~~ 448 (465)
T TIGR00894 440 ILCVIFYLI 448 (465)
T ss_pred HHHHHHeee
Confidence 666555444
No 29
>PRK03545 putative arabinose transporter; Provisional
Probab=99.94 E-value=1.2e-23 Score=210.05 Aligned_cols=353 Identities=15% Similarity=0.107 Sum_probs=218.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHH
Q 011756 25 QGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFV 87 (478)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i 87 (478)
++..++.+.++.+....+........|.+.+|+|+++.+.+++.+.+.++..+ +..+.++..+
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 86 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIA 86 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 34333333333333333333455567899999999999999999988766443 5566777788
Q ss_pred HHHHHhhhchHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHH
Q 011756 88 AGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLL 166 (478)
Q Consensus 88 ~~~~~~~a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f 166 (478)
+++.+++++|+++++++|+++|++.+.. +...+++.|++|+++||+++++...+..+|..+++.++..+.++.|||+.|
T Consensus 87 ~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f 166 (390)
T PRK03545 87 SHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTF 166 (390)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHH
Confidence 8888999999999999999999888765 345678899999999999999999999999999999998888888999999
Q ss_pred HHhhHHHHHHHH-HHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccc
Q 011756 167 ALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARK 245 (478)
Q Consensus 167 ~i~~i~~~l~~~-~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (478)
++.++..++..+ ...++||.|+. ++++.
T Consensus 167 ~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~---------------------------------------------- 195 (390)
T PRK03545 167 LAIGGGALITLLLLIKLLPLLPSE-----HSGSL---------------------------------------------- 195 (390)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCC-----CcchH----------------------------------------------
Confidence 999887766543 34456765420 00000
Q ss_pred cccccccccchhhcccC-cchHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhCCCCCcccccccccCccchhhHHHHHHHH
Q 011756 246 RTTVRKSGFSSFLMLFS-PRFFKTTILLWVLYFGNSFVYYGIVLLA-SELSGSQSKCSSSILLSENVQDASVYINVFITS 323 (478)
Q Consensus 246 ~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (478)
++..+.++ ++.+.... ..+.....+++...+. +.+....+ .+............
T Consensus 196 ---------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~g-----------~s~~~~~~~~~~~~ 251 (390)
T PRK03545 196 ---------KSLPLLFRRPALVSLYL----LTVVVVTAHFTAYSYIEPFVQQVAG-----------LSENFATLLLLLFG 251 (390)
T ss_pred ---------HHHHHHHhCcHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhcC-----------CCccHHHHHHHHHH
Confidence 00111111 22221111 1111111222222222 22221111 11111111223445
Q ss_pred hhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHH
Q 011756 324 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTG 403 (478)
Q Consensus 324 ~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~ 403 (478)
++.+++.+..+++.||.|||.....................+............+...+..........|..| +.|+++
T Consensus 252 ~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~ 330 (390)
T PRK03545 252 GAGIIGSVLFSRLGNRHPSGFLLIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVA 330 (390)
T ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHH
Confidence 6788899999999999999876443333222222211222222222222211111111222233455667776 688999
Q ss_pred HHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhcc
Q 011756 404 AGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIP 453 (478)
Q Consensus 404 ~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 453 (478)
.|+.+...++|..++|.+.+.+.+..+....+...+.+.+++.+..++..
T Consensus 331 ~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 331 MALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999888877766677777777777766666553
No 30
>PRK03699 putative transporter; Provisional
Probab=99.94 E-value=5.4e-24 Score=212.65 Aligned_cols=358 Identities=15% Similarity=0.146 Sum_probs=232.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHH
Q 011756 22 GKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALV 84 (478)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~ 84 (478)
+.+|+++...+.+++++++.+....+...|.+++++|+++.+.+++.+...+|..+ ++.+.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~ 81 (394)
T PRK03699 2 NSNRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFAL 81 (394)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 35778888899999999999999999999999999999999999999988776554 4455667
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHh-cCcch
Q 011756 85 TFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVM-PILTW 162 (478)
Q Consensus 85 ~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~-~~~~W 162 (478)
..++.++.++++|+..+++.|++.|++.|... ....++.|+.|+++||+..+..+....+|..+++.+...+. +..+|
T Consensus 82 ~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw 161 (394)
T PRK03699 82 MILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEW 161 (394)
T ss_pred HHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH
Confidence 77788888899999999999999999887653 45567899999999999999988888888888888776554 45799
Q ss_pred HHHHHHhhHHHHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCccccccc
Q 011756 163 RWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSS 242 (478)
Q Consensus 163 R~~f~i~~i~~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (478)
|+.|.+.+++.++..+..++ .+.|+. .+.+ + ++. ..+
T Consensus 162 ~~~f~~~~~~~~~~~~~~~~-~~~p~~--~~~~----------------------------~---~~~--~~~------- 198 (394)
T PRK03699 162 YWVYACIGLVYVAIFILTLF-SEFPAL--GKHA----------------------------P---KAD--KPV------- 198 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCccc--cccC----------------------------c---ccc--Ccc-------
Confidence 99999888777655443332 233320 0000 0 000 000
Q ss_pred ccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHH
Q 011756 243 ARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFIT 322 (478)
Q Consensus 243 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (478)
. + ..++ +..+......+.....+++...|.|.+..+.. +.+...........
T Consensus 199 --~-----~-------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~----------g~s~~~~~~~~~~~ 250 (394)
T PRK03699 199 --A-----K-------EKWG----IGVLFLAIAALLYILAQLTFISWVPEYAQKKF----------GMSLEDAGNLVSNF 250 (394)
T ss_pred --c-----c-------ccCC----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CCChHHhhHHHHHH
Confidence 0 0 0001 12222222333333444555555554432110 01111111112233
Q ss_pred HhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHH
Q 011756 323 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 402 (478)
Q Consensus 323 ~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~ 402 (478)
.++..+|.++.++++||++||+.+.....+..+....+....+........+...++..+.++....+..|..|. .+++
T Consensus 251 ~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~ 329 (394)
T PRK03699 251 WMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKV-ASPK 329 (394)
T ss_pred HHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-CCHH
Confidence 456788999999999999999987765544443333322222222222222222233334455556667777764 4678
Q ss_pred HHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHh
Q 011756 403 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILL 451 (478)
Q Consensus 403 ~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 451 (478)
..|.....+++|+.++|.+.+.+.+..+....++..+++..++.+....
T Consensus 330 ~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (394)
T PRK03699 330 LVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCIL 378 (394)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHH
Confidence 8899999999999999999998887766556666666666665544333
No 31
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.94 E-value=4.1e-24 Score=218.33 Aligned_cols=379 Identities=13% Similarity=0.101 Sum_probs=225.6
Q ss_pred ccHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH------------
Q 011756 10 YTLDEALTFMGFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS------------ 77 (478)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~------------ 77 (478)
.|.+++++...+.+.|++.+......++.+.++....+...|.+++|+|++.++.+++.+.+.+|...
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~ 98 (476)
T PLN00028 19 EHKATEFRLFSFARPHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY 98 (476)
T ss_pred ccccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455667667777888888888888999999998888889999999999999999988877766543
Q ss_pred -----HHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCchhhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHH
Q 011756 78 -----ILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAAL 152 (478)
Q Consensus 78 -----~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~ 152 (478)
+..+.+++.++.++.++++|+..++++|++.|++.+.......+++|++|+++||+++++......+|..+++.+
T Consensus 99 G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~ 178 (476)
T PLN00028 99 GPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLL 178 (476)
T ss_pred CChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHH
Confidence 344556667777788889999999999999999887644444578999999999999999887666666665544
Q ss_pred HHHH----hc-----CcchHHHHHHhhHHHHHHHHHHHhcC-CCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCC
Q 011756 153 AWIV----MP-----ILTWRWLLALSAIPAFVLLIFIVFMP-ESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSD 222 (478)
Q Consensus 153 ~~~~----~~-----~~~WR~~f~i~~i~~~l~~~~~~~lp-ESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 222 (478)
...+ .. ..|||+.|++.+++.++..+..++++ +.|+ ++.+|.+ + +
T Consensus 179 ~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~-----~~~~~~~-------~-~------------ 233 (476)
T PLN00028 179 MPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPD-----GNYRELK-------K-S------------ 233 (476)
T ss_pred HHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCC-----CchhhHH-------h-c------------
Confidence 3322 11 25899999999887776655545544 3342 1100000 0 0
Q ss_pred CCCCcccccCCCCcccccccccccccccccccchhhcc-cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcc
Q 011756 223 GTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLML-FSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCS 301 (478)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 301 (478)
. +.++.+. ...+++. .+++ .+..+..++......++...+.|.+....
T Consensus 234 ------~---~~~~~~~--------------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~l~~~---- 282 (476)
T PLN00028 234 ------G---TMPKDSF--------------SKVLRYGVTNYR----TWILALTYGYSFGVELTMDNIIAEYFYDR---- 282 (476)
T ss_pred ------C---ccccccH--------------HHHHHHHHcCch----hHHHHHHHHHHHHHHHHHHhHHHHHHHHh----
Confidence 0 0000000 0011111 1122 22222222222223333333433322111
Q ss_pred cccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHH-------HHHHHHHHHHHHHHHHHhhchhHHHHHHHH
Q 011756 302 SSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKL-------SMTIMFIFVCIFLLPLVTLQSNILLTALLS 374 (478)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (478)
.+.+.........+..++.+++.+++|+++||++||+ .......+.++..+.+....+.........
T Consensus 283 ------~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~ 356 (476)
T PLN00028 283 ------FGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMI 356 (476)
T ss_pred ------cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 0111112222334556778889999999999998762 222222222222222222222222221222
Q ss_pred HHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhc
Q 011756 375 GARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 452 (478)
Q Consensus 375 ~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 452 (478)
...++..+..+..+.+.+|+.| +.|+++.|+.+..+++|+.++|.+.. .-...+....+.+.+++.+++.++.++.
T Consensus 357 l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 357 LFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred HHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 2222222333456677777755 79999999999999899988887643 1112234456777777777776665554
No 32
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.94 E-value=2.9e-23 Score=199.54 Aligned_cols=357 Identities=20% Similarity=0.221 Sum_probs=237.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHH
Q 011756 23 KFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVT 85 (478)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~ 85 (478)
+..+..++...++.+.-+.+-+.+.-.+|++.+|+|.|..+.|+..|.+.+|..+ ++....++
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lF 88 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALF 88 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH
Confidence 4444444555555666677777888889999999999999999999999887665 56677888
Q ss_pred HHHHHHHhhhchHHHHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHH
Q 011756 86 FVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRW 164 (478)
Q Consensus 86 ~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~ 164 (478)
.++.+++++++||+.++++|++.|+.-|... +......+..||++|++++++...+..++.+++.+++.++.+.+|||.
T Consensus 89 i~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~ 168 (394)
T COG2814 89 IVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRA 168 (394)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHH
Confidence 9999999999999999999999999999874 556778999999999999999999999999999999999999999999
Q ss_pred HHHHhhHHHHHHHH-HHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccc
Q 011756 165 LLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSA 243 (478)
Q Consensus 165 ~f~i~~i~~~l~~~-~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (478)
.|++.+..+++.++ .+..+| |+-. ++.+ . .+
T Consensus 169 ~F~~ia~l~ll~~~~~~~~lP--~~~~---------------------~~~~------------~-----~~-------- 200 (394)
T COG2814 169 TFLAIAVLALLALLLLWKLLP--PSEI---------------------SGSL------------P-----GP-------- 200 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCC--CccC---------------------CCCC------------C-----cc--------
Confidence 99999988877744 566788 3300 0000 0 00
Q ss_pred cccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHH
Q 011756 244 RKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITS 323 (478)
Q Consensus 244 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (478)
....++.+.+|+.+.......+. ....+. .+.+..|.+.+..+ .+....-......+
T Consensus 201 ---------~~~~~~~l~~p~v~~~l~~t~l~-~~g~F~--~ftYi~P~L~~v~g-----------~s~~~vs~~Ll~~G 257 (394)
T COG2814 201 ---------LRTLLRLLRRPGVLLGLLATFLF-MTGHFA--LYTYIRPFLESVAG-----------FSVSAVSLVLLAFG 257 (394)
T ss_pred ---------hhHHHHHhcCchHHHHHHHHHHH-Hcchhh--hHHhHHHHHHHccC-----------CCHhHHHHHHHHHH
Confidence 00122233344444333322222 222221 22233444432211 11122223456677
Q ss_pred hhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh-hchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHH
Q 011756 324 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-LQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 402 (478)
Q Consensus 324 ~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~ 402 (478)
++.++|.+++|.+.|| +.|+.+........+..+.+.. ..+.+......+...+.............++ .-++.+..
T Consensus 258 v~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~ 335 (394)
T COG2814 258 IAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADL 335 (394)
T ss_pred HHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHH
Confidence 8889999999999999 7777666554444433333332 2223222222222222111111223445555 44699999
Q ss_pred HHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhc
Q 011756 403 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 452 (478)
Q Consensus 403 ~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 452 (478)
+.++....-|+|...+..+.+.++++.+.....+.-+...+.+.++....
T Consensus 336 a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~ 385 (394)
T COG2814 336 AGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLS 385 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988888887655445555555555555554443
No 33
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.94 E-value=4.2e-23 Score=206.01 Aligned_cols=342 Identities=16% Similarity=0.107 Sum_probs=224.1
Q ss_pred HHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhchHHHHHHHHH
Q 011756 44 MILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFSPNYISLLILRG 106 (478)
Q Consensus 44 ~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a~~~~~l~~~R~ 106 (478)
...+...|.+++|+++++++.+++.|.+.+|..+ +..+..++.++.+.+++++|+..+++.|+
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~ 105 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSAL 105 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHH
Confidence 5677889999999999999999999998887655 67788888999999999999999999999
Q ss_pred HhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCc-chHHHHHHhhHHHHHHHHHHHhcC
Q 011756 107 LAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPIL-TWRWLLALSAIPAFVLLIFIVFMP 184 (478)
Q Consensus 107 l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~-~WR~~f~i~~i~~~l~~~~~~~lp 184 (478)
++|+|.|... ....++.|+.| ++|+++++.+..+...|..+++.++..+.++. +||+.+.+.+++.++.++.++...
T Consensus 106 l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 184 (393)
T PRK09705 106 LGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQS 184 (393)
T ss_pred HHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999988754 34566788887 88999999999999999999988887776664 899998777666554433332221
Q ss_pred -CCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccccccccchhhcccCc
Q 011756 185 -ESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSP 263 (478)
Q Consensus 185 -ESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 263 (478)
+.|+ + + + .++.. ..+.++++
T Consensus 185 ~~~~~---------~-------------------~---~-----------~~~~~-----------------~~~~l~~~ 205 (393)
T PRK09705 185 AREVA---------S-------------------S---H-----------KTTTT-----------------PVRVVFTP 205 (393)
T ss_pred cCCCc---------c-------------------c---c-----------CCCcC-----------------CcccccCH
Confidence 1110 0 0 0 00000 00011122
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchH
Q 011756 264 RFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRK 343 (478)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr 343 (478)
+.+ ......+.....+++...+.|.+..+.+ .+.........+..++.++|.++.+++.||.|||
T Consensus 206 ~~~----~l~~~~~~~~~~~~~~~~~lp~~l~~~g-----------~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~ 270 (393)
T PRK09705 206 RAW----TLGVYFGLINGGYASLIAWLPAFYIEIG-----------ASAQYSGSLLALMTLGQAAGALLMPAMARHQDRR 270 (393)
T ss_pred hHH----HHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------CChhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Confidence 222 2222223334455566555554432211 1111111223455577888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHh-hchhHHHHHHHHHHHHHhhhhhhhhhhhccccc-CcChhHHHHHHHHHHHhHhHhHHHHH
Q 011756 344 LSMTIMFIFVCIFLLPLVT-LQSNILLTALLSGARMFSMGTFIIANIFAPEIY-PTSMRSTGAGVAYAVGRIGGMVCPLV 421 (478)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~-p~~~R~~~~g~~~~~~~lg~~~~p~~ 421 (478)
+.+..+..+..+....+.. ..+..... .....+...+.++.......+.+ |++.|++..|+.+.++++++.++|.+
T Consensus 271 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~ 348 (393)
T PRK09705 271 KLLMLALVLQLVGFCGFIWLPLQLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWF 348 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHccchHHHHH--HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9877765544433322221 11111111 11111111223344444555666 46889999999999999999999999
Q ss_pred HHHHhhccch-hHHHHHHHHHHHHHHHHHHhccccccCcccc
Q 011756 422 AVGLVTSCHQ-TAAILLLEALIVLSVVVILLIPFETKGKELV 462 (478)
Q Consensus 422 ~~~l~~~~~~-~~~~~~~~~~~~i~~~~~~~~~pet~g~~l~ 462 (478)
.+.+.+..+. ...+.+.+++++++.++.+.+.|||++|...
T Consensus 349 ~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK09705 349 SGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQLWV 390 (393)
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccccchhc
Confidence 9988877653 3455666667777777778889999987654
No 34
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.93 E-value=4.5e-23 Score=204.12 Aligned_cols=336 Identities=18% Similarity=0.248 Sum_probs=210.0
Q ss_pred HHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhchHHHHHH
Q 011756 41 MEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFSPNYISLLI 103 (478)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a~~~~~l~~ 103 (478)
.+....+...|.+++|+|+++.+.+++.+.+.+|..+ +..+.++..++.+..++++|++.+++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (377)
T TIGR00890 17 GYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYL 96 (377)
T ss_pred hHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456778889999999999999999999999887655 45667777888888999999999999
Q ss_pred HHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHHHH-HH
Q 011756 104 LRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIF-IV 181 (478)
Q Consensus 104 ~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~l~~~~-~~ 181 (478)
+|++.|++.|... .......|+.| |+||++.++...+..+|.++++++...+.+..+||+.|.+.++..++..+. .+
T Consensus 97 ~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 175 (377)
T TIGR00890 97 TYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAF 175 (377)
T ss_pred HHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988653 44456778876 679999999999999998877666666666789999999988877766544 44
Q ss_pred hcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccccccccchhhccc
Q 011756 182 FMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF 261 (478)
Q Consensus 182 ~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 261 (478)
++||+|+-.. + ++ . +. .+++ .+.++.+
T Consensus 176 ~~~~~~~~~~-~------------------~~---~--------~~------~~~~-----------------~~~~~~~ 202 (377)
T TIGR00890 176 LIGYPPGQLI-K------------------TN---I--------EV------SVKD-----------------YTVWEML 202 (377)
T ss_pred heecCchhcc-c------------------cC---c--------cc------chhh-----------------hhHHHHH
Confidence 4555442000 0 00 0 00 0000 0011112
Q ss_pred -CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhh
Q 011756 262 -SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRV 340 (478)
Q Consensus 262 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~ 340 (478)
+++.+. .....+...+.......+.+.+.... +.+............+..+++.+..+++.||+
T Consensus 203 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 267 (377)
T TIGR00890 203 RTPQFWV----LYLSFFLNAVSGLLLIGLYKPYGQSL-----------GLSDGFLVLAVSISSIFNGGGRPFLGALSDKI 267 (377)
T ss_pred cCccHHH----HHHHHHHHhHHHHHHHHHHHHHHHHc-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222221 11111111111111111111111110 01111111223445567788999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhch--hHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHH
Q 011756 341 GRKLSMTIMFIFVCIFLLPLVTLQS--NILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVC 418 (478)
Q Consensus 341 GRr~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~ 418 (478)
|||+.+..+..+..+..+......+ ............+...+.....+.+.+|.+|++.|+++.|+.+...++|+.++
T Consensus 268 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~ 347 (377)
T TIGR00890 268 GRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFG 347 (377)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHH
Confidence 9999887766555444333332221 11111111111111122234456788899999999999999999999999999
Q ss_pred HHHHHHHhhccchhHHHHHHHHHHHHH
Q 011756 419 PLVAVGLVTSCHQTAAILLLEALIVLS 445 (478)
Q Consensus 419 p~~~~~l~~~~~~~~~~~~~~~~~~i~ 445 (478)
|.+.+.+.+..+....+.+.+++.+++
T Consensus 348 ~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 348 GLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 999888877665555555555554443
No 35
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.92 E-value=2.2e-22 Score=202.64 Aligned_cols=366 Identities=17% Similarity=0.088 Sum_probs=226.9
Q ss_pred HHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHh-----h
Q 011756 37 FSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSA-----F 94 (478)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~-----~ 94 (478)
++..+.........|.+.++++.++.+.|++.+...++..+ +..+..+..++.+..+ .
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 106 (417)
T PRK10489 27 FISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLP 106 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcC
Confidence 34444455666778888888888999999999988777554 1122222222222221 2
Q ss_pred hchHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHH
Q 011756 95 SPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPA 173 (478)
Q Consensus 95 a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~ 173 (478)
+++++.+++.|++.|++.|.. +....++.|+.|+++|++..++.+....+|..+++.++..+.+..+||+.|.+.++..
T Consensus 107 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~ 186 (417)
T PRK10489 107 EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGT 186 (417)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 578899999999999887654 3445678899999999999999999999999999999988877789999999888777
Q ss_pred HHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccccccc
Q 011756 174 FVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSG 253 (478)
Q Consensus 174 ~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (478)
++..+..+.+||+|+.. +++.+ ..++.
T Consensus 187 ~~~~~~~~~l~~~~~~~--~~~~~-------------------------------------~~~~~-------------- 213 (417)
T PRK10489 187 FITLLPLLRLPALPPPP--QPREH-------------------------------------PLRSL-------------- 213 (417)
T ss_pred HHHHHHHHhCCCCCCCC--ccccc-------------------------------------chHHH--------------
Confidence 66666667788765310 00000 00000
Q ss_pred cchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHH
Q 011756 254 FSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTA 333 (478)
Q Consensus 254 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 333 (478)
...++..++++..+...+..... . ...+...+.|.+..... +.+....-.......++.+++.++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~p~~~~~~~----------g~~~~~~g~~~~~~~~g~~ig~~~~ 279 (417)
T PRK10489 214 LAGFRFLLASPVVGGIALLGGLL---T-MASAVRVLYPALADEVW----------QMGAAQIGLLYAAVPLGAALGALTS 279 (417)
T ss_pred HHHHHHHHcChHHHHHHHHHHHH---H-HHHhHHHhhHHHHHhcc----------CCChhHhHHHHHHHHHHHHHHHHHH
Confidence 00111222222222222111111 1 11222333333321100 0111111112234456778888999
Q ss_pred HHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhH
Q 011756 334 ALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRI 413 (478)
Q Consensus 334 ~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~l 413 (478)
+++.||.++|+.+..+..+.++..+.+....+........+...+......+..+.+..|..|.+.|+++.|+.+...++
T Consensus 280 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~ 359 (417)
T PRK10489 280 GWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVT 359 (417)
T ss_pred HHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhh
Confidence 99999977777666655444443333332222222112222221211112234467888999999999999999999999
Q ss_pred hHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccccCcccchhhcccc
Q 011756 414 GGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELVNTIDGVS 469 (478)
Q Consensus 414 g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g~~l~~~~~~~~ 469 (478)
|..++|.+.+.+.+..+....+...+++.++..++.+...||+|+++++|..+|..
T Consensus 360 g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (417)
T PRK10489 360 GDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEVDAS 415 (417)
T ss_pred hHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccccccccccccCCCC
Confidence 99999999998887766556677777777766677777779999999998776654
No 36
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.92 E-value=2.3e-22 Score=203.76 Aligned_cols=383 Identities=15% Similarity=0.190 Sum_probs=228.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHH
Q 011756 24 FQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTF 86 (478)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~ 86 (478)
..+..+..+.+++.....++....+..|.+++ +|+++++.+++.+.+.++... +..+.++..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~ 102 (438)
T TIGR00712 24 LRWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHH
Confidence 45566677778889999999999999998876 599999999999998877655 445555666
Q ss_pred HHHHHHhhh----chHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHH-HhcCc
Q 011756 87 VAGLLSAFS----PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWI-VMPIL 160 (478)
Q Consensus 87 i~~~~~~~a----~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~-~~~~~ 160 (478)
++.++.+.+ +++..+.+.|++.|++.|.. +....++.|++|+++||+.+++.+.+..+|..+++.+... +..+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 182 (438)
T TIGR00712 103 AVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFN 182 (438)
T ss_pred HHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhh
Confidence 666655543 56788899999999988875 3455678899999999999999999999998888776554 33357
Q ss_pred chHHHHHHhhHHHHHH-HHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccc
Q 011756 161 TWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPL 239 (478)
Q Consensus 161 ~WR~~f~i~~i~~~l~-~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (478)
+||+.|++.++..++. ++..+++||+|+... +++..+ .++ |...+..+ +.+.+
T Consensus 183 ~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~--------~~~----------~~~~~~~~---~~~~~-- 236 (438)
T TIGR00712 183 DWHAALYFPAICAIIVALFAFAMMRDTPQSCG---LPPIEE--------YRN----------DYPDDYNE---KAEQE-- 236 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCHHhcC---CCCchh--------ccc----------cccccccc---ccccc--
Confidence 9999999988877665 445667899887421 110000 000 00000000 00000
Q ss_pred cccccccccccccccchhhccc-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHH
Q 011756 240 LSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYIN 318 (478)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (478)
. +.++.. .+..+ +++.+.. ....+.....+++...+.|.+..... +.+.......
T Consensus 237 -----~---~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~p~~l~~~~----------g~s~~~~~~~ 292 (438)
T TIGR00712 237 -----L---TAKEIF--MQYVLPNKLLWYI----AIANVFVYLLRYGVLDWSPTYLKEVK----------HFALDKSSWA 292 (438)
T ss_pred -----c---chHHHH--HHHHccCchHHHH----HHHHHHHHHHHHHHHHhHHHHHHHcc----------CCChhhHHHH
Confidence 0 000000 01112 2222211 11112222333444445544332110 0111111122
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHH---HHHHHHHHhh--chhHHHHHHHHHHHHHhhhhhhhhhhhccc
Q 011756 319 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFV---CIFLLPLVTL--QSNILLTALLSGARMFSMGTFIIANIFAPE 393 (478)
Q Consensus 319 ~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E 393 (478)
.....+..+++.+++++++||++||+....+.... .+..+.+... .+........+...+...++.........|
T Consensus 293 ~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 372 (438)
T TIGR00712 293 YFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALE 372 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 33445667889999999999996433211222111 1111111111 111211111122212122222222346779
Q ss_pred ccCcChhHHHHHHHHHHHhHhH-hHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 394 IYPTSMRSTGAGVAYAVGRIGG-MVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 394 ~~p~~~R~~~~g~~~~~~~lg~-~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
.+|++.|+++.|+.+.++++++ .++|.+.+.+.+..+....+.++.++.+++.+..++..||.|
T Consensus 373 ~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 373 LAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred hcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999875 578999888887766666777777777788788888888765
No 37
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.92 E-value=5.6e-23 Score=211.13 Aligned_cols=377 Identities=14% Similarity=0.156 Sum_probs=228.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHH
Q 011756 28 ALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGL 90 (478)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~ 90 (478)
++..+.++.+.+.+|....+...|.+.+++|.++++.+++.+.+.++..+ ++.+.++..++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 45677788999999999999999999999999999999999988776544 5566777788888
Q ss_pred HHhhhchHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHh
Q 011756 91 LSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALS 169 (478)
Q Consensus 91 ~~~~a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~ 169 (478)
++++++|+..++++|+++|++.|.. +...+++.|++|+++||+..+++.....+|..+++.++..+.++.+||+.|++.
T Consensus 83 ~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~ 162 (485)
T TIGR00711 83 LCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLIN 162 (485)
T ss_pred HHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhh
Confidence 8999999999999999999998875 456678999999999999999999999999999999999888889999999998
Q ss_pred hHHHHHHHH-HHHhcCCCchhhhhcCChhHHHHHHHHHH------H-HcCCCCCCCCCCCCCCCCcccccCC-CCccccc
Q 011756 170 AIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIA------Q-FNQTSLPSGNLTSDGTNDLDEEFST-SEETPLL 240 (478)
Q Consensus 170 ~i~~~l~~~-~~~~lpESP~~l~~~~~~~~a~~~l~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 240 (478)
++++++..+ ..+++||+++ .++++.|.....+.... . ..+++ .+ +.+....... .......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~ 232 (485)
T TIGR00711 163 VPIGIIVVVVAFFILPRDKP--AASENFDFLGLLLLSVGLGSLLYGLSEGPE-------RG-WFDSNEILILSITGLVAI 232 (485)
T ss_pred hHHHHHHHHHHHHHcCCccc--cccCCCcHHHHHHHHHHHHHHHHHHhhCCC-------CC-CCCchHHHHHHHHHHHHH
Confidence 877665543 4556787654 12223332221111110 0 00000 00 0000000000 0000000
Q ss_pred ccccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHH
Q 011756 241 SSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVF 320 (478)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (478)
.....++...+++..+.+.+.+++++...+.. +...+.+++...+.|.+.... .+.+.........
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~----------~g~s~~~~g~~~~ 298 (485)
T TIGR00711 233 IAFVVWELTDDNPLVDLRLFKYRNFTIGCVYM----SLLGLGLYGSFYLLPLYLQQV----------LGYTALQAGLHIL 298 (485)
T ss_pred HHHHHHHHcCCCCccCHHHHcCCChHHHHHHH----HHHHHHHHHHHHHHHHHHHHh----------cCCCHHHHHHHHH
Confidence 00000000001111122223333333222222 222223333333333322110 0111111122233
Q ss_pred HHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH--hh-chh-HHHHHHHHHHHHHhhhhhhhhhhhcccccC
Q 011756 321 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV--TL-QSN-ILLTALLSGARMFSMGTFIIANIFAPEIYP 396 (478)
Q Consensus 321 ~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~--~~-~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p 396 (478)
...++.+++.++.+++.||+|||+.+..+....++....+. .. ... ...........+.....+........|.+|
T Consensus 299 ~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~ 378 (485)
T TIGR00711 299 PVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLP 378 (485)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 44567788999999999999999988777655544333333 11 111 111111112211111222334555668889
Q ss_pred cChhHHHHHHHHHHHhHhHhHHHHHHHHHhhc
Q 011756 397 TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 428 (478)
Q Consensus 397 ~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~ 428 (478)
++.|+++.|+.+.+.++|+.+++.+.+.+.+.
T Consensus 379 ~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 379 PHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988877653
No 38
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.92 E-value=1.1e-21 Score=196.50 Aligned_cols=350 Identities=16% Similarity=0.094 Sum_probs=214.7
Q ss_pred HHHHHHHHHHHHHHHhHHh-hhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhh
Q 011756 34 LGWFSEAMEVMILSFVGPA-VKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFS 95 (478)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a 95 (478)
...+++.++........|. +++++|+++.+.|++.+++.++..+ +..+.+++.++++..+++
T Consensus 22 ~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~ 101 (399)
T PRK05122 22 MFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLA 101 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHh
Confidence 4455666666666666665 6889999999999999998887655 444555555544443332
Q ss_pred --------chHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHH
Q 011756 96 --------PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLL 166 (478)
Q Consensus 96 --------~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f 166 (478)
.++.++++.|+++|+|.+.. +....+..|+.|+++||++.++.+.+...|.++++.++..+.+..|||+.+
T Consensus 102 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~ 181 (399)
T PRK05122 102 GLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLG 181 (399)
T ss_pred hhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHH
Confidence 25778999999999998875 345677889999999999999999999999999999998888889999998
Q ss_pred HHhhHHHHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCccccccccccc
Q 011756 167 ALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKR 246 (478)
Q Consensus 167 ~i~~i~~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (478)
.+..+.+++..+.....||+++ +++ ++.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~---~~~----------------------------------------~~~--------- 209 (399)
T PRK05122 182 LLIMLLALLGLLLARPRPAVPP---VKG----------------------------------------ERL--------- 209 (399)
T ss_pred HHHHHHHHHHHHHHhcCCCCCC---CCc----------------------------------------cch---------
Confidence 8776655444333322333211 000 000
Q ss_pred ccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhh
Q 011756 247 TTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAE 326 (478)
Q Consensus 247 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (478)
+.++.++ +.++...... ...+.+.....+.+.+....+ ..... .......++.
T Consensus 210 ---------~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-----------~~~~~--~~~~~~~~~~ 262 (399)
T PRK05122 210 ---------PFRRVLG-RVWPYGMGLA----LASIGFGTIATFITLYYAARG-----------WDGAA--LALTLFGVAF 262 (399)
T ss_pred ---------hHHHHHH-HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHcc-----------cccch--HHHHHHHHHH
Confidence 0000000 1111111111 111112222222222111111 00111 1122344566
Q ss_pred hhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHH
Q 011756 327 LPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGV 406 (478)
Q Consensus 327 ~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~ 406 (478)
+++.+..+++.||+|||+.+..+.....+.........+.+..........+.....++.......|..|.+.|+++.|+
T Consensus 263 ~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 342 (399)
T PRK05122 263 VGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGA 342 (399)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 77889999999999999987766555444433333333322222222222222223334445666789999999999999
Q ss_pred HHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccccCcccch
Q 011756 407 AYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELVN 463 (478)
Q Consensus 407 ~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g~~l~~ 463 (478)
.+...++|+.++|.+.+.+.+..+....+.+.+++.+++.+..+++ ++.++|+.+|
T Consensus 343 ~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 398 (399)
T PRK05122 343 YSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLL-YRRAPRAVPE 398 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHh-cccccccCCC
Confidence 9999999998888888888776666666767777777766555554 5566666554
No 39
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.92 E-value=9.3e-22 Score=202.18 Aligned_cols=379 Identities=14% Similarity=0.092 Sum_probs=225.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHH
Q 011756 25 QGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFV 87 (478)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i 87 (478)
++.+++.++++.+....|...++...|.+.+|+|.+.++.+|+.+.+.++... ++.+.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~ 83 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGL 83 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 45678888899999999999999999999999999999999999998876544 5667778888
Q ss_pred HHHHHhhhchHHHHHHHHHHhhcccCchh-hHHHHHhhc-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHH
Q 011756 88 AGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEF-VPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWL 165 (478)
Q Consensus 88 ~~~~~~~a~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~-~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~ 165 (478)
+++.+++++|+++++++|+++|+|.|... .....+.+. .|+++|++..+++.....+|..++|.++..+.++.+|||.
T Consensus 84 ~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~ 163 (495)
T PRK14995 84 ASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSV 163 (495)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHH
Confidence 99999999999999999999999887653 334445454 5789999999999999999999999999999999999999
Q ss_pred HHHhhHHHHHH-HHHHHhcCCCchhhhhcCChhHHHHHHH------HHHHHcCCCCCCCCCCCCCCCCcccccCC-CCcc
Q 011756 166 LALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILD------KIAQFNQTSLPSGNLTSDGTNDLDEEFST-SEET 237 (478)
Q Consensus 166 f~i~~i~~~l~-~~~~~~lpESP~~l~~~~~~~~a~~~l~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 237 (478)
|++.....++. ++..+++||+|+- ++++.|.....+. ......... .. .... ...... .-..
T Consensus 164 f~i~~~~~~~~~~l~~~~l~~~~~~--~~~~~d~~g~~~~~~~~~~l~~~~~~~~--~~-----~~~~-~~~~~~~~~~~ 233 (495)
T PRK14995 164 FLINVPIVLVVMGLTARYVPRQAGR--RDQPLNLGHALMLIVAILLLVYSAKTAL--KG-----FLSL-WVTSLTLLTGA 233 (495)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCC--CCCCCChHhHHHHHHHHHHHHHHHHhcc--cc-----CCch-HHHHHHHHHHH
Confidence 99887655554 3455668887642 1112222111110 000000000 00 0000 000000 0000
Q ss_pred cccccccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHH
Q 011756 238 PLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYI 317 (478)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 317 (478)
........++...+.+..+.+.++++...... ...+.....+++...+.|...... .+.+....-.
T Consensus 234 ~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~lq~v----------~g~s~~~ag~ 299 (495)
T PRK14995 234 LLLGLFIRTQLAASRPMIDMRLFTHRIILSGV----VMAMTAMITLVGFELLMAQELQFV----------HGLSPLEAGM 299 (495)
T ss_pred HHHHHHHHHHhcCCCCCcCHHHhCCcccHHHH----HHHHHHHHHHHHHHHHHHHHHHHH----------cCCCHHHHHH
Confidence 00000000000111222233322223222111 112222223333333333221100 0111111112
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh---chhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 011756 318 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL---QSNILLTALLSGARMFSMGTFIIANIFAPEI 394 (478)
Q Consensus 318 ~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~ 394 (478)
......++..++..+.|++.||+|||+.+..+..+.++....+... .+.+..........+..............+.
T Consensus 300 ~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~ 379 (495)
T PRK14995 300 FMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAA 379 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 2233445667788999999999999998777665544333222221 1122112122222221222233456666788
Q ss_pred cCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhh
Q 011756 395 YPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 427 (478)
Q Consensus 395 ~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~ 427 (478)
.|.+.++.+.++.+...++|+.+++.+.+.+.+
T Consensus 380 ~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 380 APPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred CCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999888776654
No 40
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.92 E-value=4.3e-22 Score=198.31 Aligned_cols=330 Identities=20% Similarity=0.258 Sum_probs=202.7
Q ss_pred HHHHHHHHHHHHHhHHhhhhhcC--CCcchhhHHHHHHH--HHHH-------H-------------HHHHHHHHHHHHHH
Q 011756 36 WFSEAMEVMILSFVGPAVKSEWG--LSSSEESLITTVVF--AGMM-------S-------------ILGGALVTFVAGLL 91 (478)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~s~~~--~G~~-------~-------------~~~~~~~~~i~~~~ 91 (478)
.+.|++|++..++..+.+.+++. .++++.+.+.+... .+.. + +..+.++..++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~ 81 (394)
T TIGR00883 2 NAVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLL 81 (394)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 35799999999999999888764 45566666554322 1111 1 45566777788888
Q ss_pred HhhhchHH--------HHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHh-----
Q 011756 92 SAFSPNYI--------SLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVM----- 157 (478)
Q Consensus 92 ~~~a~~~~--------~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~----- 157 (478)
.++++++. .+++.|+++|++.|.. +....++.|+.|+++|++..+..+.+..+|.++++.++..+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~ 161 (394)
T TIGR00883 82 IGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGD 161 (394)
T ss_pred HhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 88888875 4899999999998875 455678999999999999999999999999999888765442
Q ss_pred ---cCcchHHHHHHhhHHHHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCC
Q 011756 158 ---PILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTS 234 (478)
Q Consensus 158 ---~~~~WR~~f~i~~i~~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (478)
+.++||+.|.+.++..++..+....+||+|++..++++. + +
T Consensus 162 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~--------~------------ 205 (394)
T TIGR00883 162 DALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEKH----------------K--------K------------ 205 (394)
T ss_pred HHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhcc----------------c--------c------------
Confidence 357999999998877776666667788887642111000 0 0
Q ss_pred CcccccccccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchh
Q 011756 235 EETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDAS 314 (478)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 314 (478)
+.. +.++.++++. +.........+.....++....+.|.+..... +.+...
T Consensus 206 ~~~------------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------g~~~~~ 256 (394)
T TIGR00883 206 KRG------------------PIRETLTKHR-KPFLLGLGLVIATTTTFYLITTYLPTYLTQTL----------GLSANS 256 (394)
T ss_pred ccC------------------CHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCChhH
Confidence 000 0011111111 11222222223333334444334443321100 011111
Q ss_pred hHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHH--HHHHhh--chhHHHHHHHHHHHHHhhhhhhhhhhh
Q 011756 315 VYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFL--LPLVTL--QSNILLTALLSGARMFSMGTFIIANIF 390 (478)
Q Consensus 315 ~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~ 390 (478)
.........+...++.++.+++.||+|||+.+..+..+..... ...... .+............+.....++..+.+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 336 (394)
T TIGR00883 257 ALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSF 336 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 1122344456678888899999999999997664433332221 111111 111222222222222222344567889
Q ss_pred cccccCcChhHHHHHHHHHHH-hHhHhHHHHHHHHHhhccc
Q 011756 391 APEIYPTSMRSTGAGVAYAVG-RIGGMVCPLVAVGLVTSCH 430 (478)
Q Consensus 391 ~~E~~p~~~R~~~~g~~~~~~-~lg~~~~p~~~~~l~~~~~ 430 (478)
.+|.+|++.|+++.|+.+.++ .+|+.++|.+.+.+.+..+
T Consensus 337 ~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 337 LPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred HHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 999999999999999876665 4678899999888877655
No 41
>PRK10504 putative transporter; Provisional
Probab=99.91 E-value=1.1e-20 Score=193.51 Aligned_cols=376 Identities=14% Similarity=0.124 Sum_probs=217.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHH
Q 011756 29 LAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLL 91 (478)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~ 91 (478)
+..+.++.+++.+|...++...|.+.+|+|.++.+.+++.+.+.++..+ ++.+..+..++.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~ 91 (471)
T PRK10504 12 LWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLF 91 (471)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHH
Confidence 4456678899999999999999999999999999999998887766443 34455566667777
Q ss_pred HhhhchHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhh
Q 011756 92 SAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSA 170 (478)
Q Consensus 92 ~~~a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~ 170 (478)
++++++++.+++.|+++|++.|.. +...+++.|+.|+++|++..++......+|..+++.++..+.++.+||+.|.+..
T Consensus 92 ~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~ 171 (471)
T PRK10504 92 CALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINI 171 (471)
T ss_pred HHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHH
Confidence 788999999999999999998875 4556678999999999999999999999999999999988888899999999877
Q ss_pred HHHHHHHH-HHHhcCCCchhhhhcCChhHHHHHHHHHH------HHcCCCCCCCCCCCCCCCCcccccCCCC-ccccccc
Q 011756 171 IPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIA------QFNQTSLPSGNLTSDGTNDLDEEFSTSE-ETPLLSS 242 (478)
Q Consensus 171 i~~~l~~~-~~~~lpESP~~l~~~~~~~~a~~~l~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 242 (478)
....+..+ .....||++. ++.|.|.+........ ..++.+. ...... ....... .......
T Consensus 172 ~~~~l~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~~ 240 (471)
T PRK10504 172 PVGIIGAIATLMLMPNYTM---QTRRFDLSGFLLLAVGMATLTLALDGSKG-------LGLSPL-AIAGLVAVGVVALLL 240 (471)
T ss_pred HHHHHHHHHHHHhCCCccc---cCCCCChHHHHHHHHHHHHHHHHHhcCCc-------CCcchH-HHHHHHHHHHHHHHH
Confidence 65554433 3444565542 2233333322211110 0000000 000000 0000000 0000000
Q ss_pred ccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHH
Q 011756 243 ARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFIT 322 (478)
Q Consensus 243 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (478)
...++...+++..+.+.+.+++++.......+........++...++..... +.+...........
T Consensus 241 ~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------------g~~~~~~g~~~~~~ 306 (471)
T PRK10504 241 YLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGL--------------GFSPFHAGLMMIPM 306 (471)
T ss_pred HHHHHhcCCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------------CCCHHHHHHHHHHH
Confidence 0000000001111222223343332222122222222111111122111100 01111111122333
Q ss_pred HhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh-chhH-H-HHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 323 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL-QSNI-L-LTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 323 ~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~-~~~~-~-~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
.++.+++..+.+.+.||+|||+.+..+..+..+....+... ...+ . ...............++..+....+..|.+.
T Consensus 307 ~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 386 (471)
T PRK10504 307 VLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL 386 (471)
T ss_pred HHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh
Confidence 44456666888999999999998877665444433322221 1111 1 1111111111122234456677788999999
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHhhcc
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSC 429 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~ 429 (478)
|+++.|+.+...++|..++|.+.+.+++..
T Consensus 387 ~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~ 416 (471)
T PRK10504 387 ASSGNSLLSMIMQLSMSIGVTIAGLLLGLF 416 (471)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999888776543
No 42
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.91 E-value=2.3e-22 Score=199.24 Aligned_cols=347 Identities=16% Similarity=0.239 Sum_probs=211.2
Q ss_pred HHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhc
Q 011756 34 LGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFSP 96 (478)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a~ 96 (478)
.+++...+|+...++..|.+++++|+++++.+++.+...++..+ +..+.++..++.++.++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 81 (379)
T TIGR00881 2 IGYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST 81 (379)
T ss_pred chhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh
Confidence 45678889999999999999999999999999999998776555 5666777788888888999
Q ss_pred hHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHH-HHHHHHhcCcchHHHHHHhhHHHH
Q 011756 97 NYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEA-ALAWIVMPILTWRWLLALSAIPAF 174 (478)
Q Consensus 97 ~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~WR~~f~i~~i~~~ 174 (478)
+++.+++.|++.|++.|.. +...+++.|+.|+++|++..++.+.+..+|..+++ .++..+.+..+||+.|++.++..+
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (379)
T TIGR00881 82 SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAI 161 (379)
T ss_pred hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence 9999999999999998875 45667899999999999999999999999999999 466666677899999998876665
Q ss_pred HH-HHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccccccc
Q 011756 175 VL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSG 253 (478)
Q Consensus 175 l~-~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (478)
+. ++..++.||+|+... +.++ + ++. .+ +.++..+ .++ ++....+
T Consensus 162 ~~~~~~~~~~~~~~~~~~---~~~~--------------~---~~~-~~---~~~~~~~-~~~--------~~~~~~~-- 206 (379)
T TIGR00881 162 IVSLICFLLLRDSPQSCG---LPPA--------------E---EMP-NE---EPDGDAE-KKE--------EELTKKQ-- 206 (379)
T ss_pred HHHHHHheeeCCCccccc---cCcc--------------c---cCc-cc---ccccccc-ccc--------ccccchH--
Confidence 54 445566788775211 0000 0 000 00 0000000 000 0000000
Q ss_pred cchhhcccC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHH
Q 011756 254 FSSFLMLFS-PRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLT 332 (478)
Q Consensus 254 ~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 332 (478)
...+.+++ +..+ ...+..+......++...+.|.+.... .+.+............++.+++.++
T Consensus 207 -~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~ 271 (379)
T TIGR00881 207 -IFLQYVLLNKVLW----YISLGYVFVYVVRTGILDWSPLYLTQE----------KGFSKEKASWAFTLYELGGLVGTLL 271 (379)
T ss_pred -HHHHHHHhcchHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH----------hCCCHHHHHHHHHHHHHHcchhHHH
Confidence 01112222 2222 111222222222223333333222110 0111111122234455677889999
Q ss_pred HHHHHhhhch-HH-HHHHHHHH-HHHHHHHHHh--hchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHH
Q 011756 333 AALLVDRVGR-KL-SMTIMFIF-VCIFLLPLVT--LQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVA 407 (478)
Q Consensus 333 ~~~l~dr~GR-r~-~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~ 407 (478)
.+++.||.++ |+ ........ .......... ..+........+...++..++....+.+.+|.+|++.|+++.|+.
T Consensus 272 ~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 351 (379)
T TIGR00881 272 AGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFV 351 (379)
T ss_pred HHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHH
Confidence 9999998643 33 22221111 1111111111 111111112222222223344445567889999999999999999
Q ss_pred HHHHhHhHhHHHHHHHHHhhccc
Q 011756 408 YAVGRIGGMVCPLVAVGLVTSCH 430 (478)
Q Consensus 408 ~~~~~lg~~~~p~~~~~l~~~~~ 430 (478)
+.++++++.++|.+.+.+.+..+
T Consensus 352 ~~~~~~g~~~~~~~~g~l~~~~g 374 (379)
T TIGR00881 352 GFFAYLGGILAGLPLGYLADGFG 374 (379)
T ss_pred HHhhhhhhhhhhhhHHHHHHhhc
Confidence 99999999999999888876544
No 43
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.91 E-value=4.5e-20 Score=184.14 Aligned_cols=166 Identities=20% Similarity=0.190 Sum_probs=128.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHH
Q 011756 22 GKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALV 84 (478)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~ 84 (478)
.|.+|+.++.+.++......+.+...-..|.+.+|+|.++.+.++..+.+.++..+ ++.+.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~ 94 (394)
T PRK10213 15 TRPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVL 94 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHH
Confidence 35577655555444444444443443447889999999999999998887665444 4566677
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchH
Q 011756 85 TFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWR 163 (478)
Q Consensus 85 ~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR 163 (478)
..++.++.++++|++.+++.|+++|++.|.. +...+++.|++|+|+|+++.+....+.++|.++++.++..+.+.+|||
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~ 174 (394)
T PRK10213 95 LTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWR 174 (394)
T ss_pred HHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHH
Confidence 7778888888999999999999999998876 455678899999999999999999999999999999999988889999
Q ss_pred HHHHHhhHHHHHHHH-HHHhcCCCc
Q 011756 164 WLLALSAIPAFVLLI-FIVFMPESP 187 (478)
Q Consensus 164 ~~f~i~~i~~~l~~~-~~~~lpESP 187 (478)
+.|++.++.+++..+ ....+||+|
T Consensus 175 ~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 175 NVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 999998776665433 334467754
No 44
>PRK12382 putative transporter; Provisional
Probab=99.90 E-value=2e-20 Score=186.79 Aligned_cols=340 Identities=19% Similarity=0.110 Sum_probs=202.1
Q ss_pred HHHHHHHHHHHHHHHhHHh-hhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHH---HH
Q 011756 34 LGWFSEAMEVMILSFVGPA-VKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGL---LS 92 (478)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~---~~ 92 (478)
++.+.+...........|. +++|+|++..+.|++.+++.++..+ ++.+.+...++++ +.
T Consensus 22 ~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~ 101 (392)
T PRK12382 22 FAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLA 101 (392)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhh
Confidence 3444444443333344443 6789999999999999998876555 3333333333322 22
Q ss_pred h-----hhchHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHH
Q 011756 93 A-----FSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLL 166 (478)
Q Consensus 93 ~-----~a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f 166 (478)
+ ..+|++.++++|+++|++.+.. +...++..|+.|+|+|+++++..+.+...|..+++.++..+.+..|||+.+
T Consensus 102 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~ 181 (392)
T PRK12382 102 AILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALA 181 (392)
T ss_pred hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHH
Confidence 2 2368899999999999988765 344567889999999999999999999999999999988887888999987
Q ss_pred HHhhHHHHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCccccccccccc
Q 011756 167 ALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKR 246 (478)
Q Consensus 167 ~i~~i~~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (478)
.+..+..++.+......||+|.. + + ++.+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~---~----------------------------~------------~~~~~------- 211 (392)
T PRK12382 182 LTTMVLPLLAWAFNGTVRKVPAH---A----------------------------G------------ERPSL------- 211 (392)
T ss_pred HHHHHHHHHHHHHHHhccCCCCC---c----------------------------c------------cCchH-------
Confidence 76655444333333333332210 0 0 00000
Q ss_pred ccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhh
Q 011756 247 TTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAE 326 (478)
Q Consensus 247 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (478)
+ +..+ ..++........ ...+.....+.+.+....+ ..... .......++.
T Consensus 212 ----~---~~~~-----~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~-----------~~~~~--~~~~~~~~~~ 262 (392)
T PRK12382 212 ----W---SVVG-----LIWKPGLGLALQ----GVGFAVIGTFVSLYFASKG-----------WAMAG--FTLTAFGGAF 262 (392)
T ss_pred ----H---HHHH-----HHHHhHHHHHHH----HHHHhHHHHHHHHHHHhcC-----------CchhH--HHHHHHHHHH
Confidence 0 0000 011111111111 1111112122221111110 01111 1122344556
Q ss_pred hhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHH
Q 011756 327 LPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGV 406 (478)
Q Consensus 327 ~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~ 406 (478)
+++.+..+++.||+|||+.+..+..+..+.........+............+.....++.......|.+|++.|+++.|+
T Consensus 263 ~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 342 (392)
T PRK12382 263 VLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGG 342 (392)
T ss_pred HHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 77889999999999999887766554444333333322222221111121111112234455677889999999999999
Q ss_pred HHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhc
Q 011756 407 AYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 452 (478)
Q Consensus 407 ~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 452 (478)
.+...++|+.++|.+.+.+.+..+....+.+.+++.+++.+..+++
T Consensus 343 ~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 343 YAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999988877666667777777777766665544
No 45
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.90 E-value=4.5e-20 Score=182.94 Aligned_cols=341 Identities=17% Similarity=0.126 Sum_probs=200.3
Q ss_pred HHHHHHHHHHHHhHHh-hhhhcCCCcchhhHHHHHHHHHHHH-----------------H-HHHHHHHHHHHHHHhhhch
Q 011756 37 FSEAMEVMILSFVGPA-VKSEWGLSSSEESLITTVVFAGMMS-----------------I-LGGALVTFVAGLLSAFSPN 97 (478)
Q Consensus 37 ~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~-~~~~~~~~i~~~~~~~a~~ 97 (478)
++..+.........|. +++++|.++.+.|++.+...++... + ..+.+...++.++.++++|
T Consensus 7 ~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 86 (375)
T TIGR00899 7 FLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRN 86 (375)
T ss_pred HHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcch
Confidence 3344444444444454 6788999999999998887553222 2 2334444556677788999
Q ss_pred HHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhH--HHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHH
Q 011756 98 YISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKW--MVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAF 174 (478)
Q Consensus 98 ~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~--~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~ 174 (478)
++.+++.|++.|.+.+.. +....+..|+.|+++|++. .+....+..+|.++++.++..+.+..+||+.|++.+++.+
T Consensus 87 ~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~ 166 (375)
T TIGR00899 87 YFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFV 166 (375)
T ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHH
Confidence 999999999998766544 3445667898888877754 5777778889999999998888888899999999988776
Q ss_pred HHHHH-HHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccccccc
Q 011756 175 VLLIF-IVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSG 253 (478)
Q Consensus 175 l~~~~-~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (478)
+..+. .+++||+|++...+ +. + .+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~----------------------------~~----~-----~~------------------ 191 (375)
T TIGR00899 167 LCGVLVWLFLPSYPRGAPGA----------------------------LT----R-----LE------------------ 191 (375)
T ss_pred HHHHHHHHhCCCcccCcccc----------------------------cC----c-----ch------------------
Confidence 66444 45589987521000 00 0 00
Q ss_pred cchhhccc-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-CCCCCcccccccccCccchhhHHHHHHHHhhhhhHHH
Q 011756 254 FSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELS-GSQSKCSSSILLSENVQDASVYINVFITSFAELPGLL 331 (478)
Q Consensus 254 ~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 331 (478)
.++.+ +++.+.........+...... ..+.|.+. ...+ .+...............+++.+
T Consensus 192 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g-----------~~~~~~g~~~~~~~~~~~~~~~ 253 (375)
T TIGR00899 192 ---VRGLLASRDTRLLFVACTLMWGCNILY----IINMPLLIIHELG-----------LPDKLAGLMMGTAAGLEIPFML 253 (375)
T ss_pred ---hhhhhcCcchHHHHHHHHHHHHHHHHH----HhhhHHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHH
Confidence 00011 122221111111112111111 11111111 0000 1111111111222344567788
Q ss_pred HHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHH
Q 011756 332 TAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVG 411 (478)
Q Consensus 332 ~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~ 411 (478)
..+++.||+|||+.+..+.....+.........+.+..........+......+....+..|..|.+ |+++.|+.+...
T Consensus 254 ~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 332 (375)
T TIGR00899 254 LAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTG 332 (375)
T ss_pred hHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHH
Confidence 8999999999999877665544333322222222222222222222222223345567788988865 569999999999
Q ss_pred hHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHh
Q 011756 412 RIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILL 451 (478)
Q Consensus 412 ~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 451 (478)
++|+.++|.+.+.+.+..+....+.+.+++.+++.+...+
T Consensus 333 ~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 333 RVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 9999999999888877665555666666666666555433
No 46
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.90 E-value=2.8e-20 Score=182.12 Aligned_cols=328 Identities=27% Similarity=0.384 Sum_probs=231.1
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHh
Q 011756 31 YSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSA 93 (478)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~ 93 (478)
.+.++.+.+.++....+...|.+.++++.++.+.+++.+...++..+ +..+.....++.+...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~ 82 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLA 82 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHH
Confidence 34466778888888889999999999999999999998888766444 4556666777777778
Q ss_pred hhchHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHH
Q 011756 94 FSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIP 172 (478)
Q Consensus 94 ~a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~ 172 (478)
+++++..+++.|++.|++.+.. +...+++.|+.|+|+|++..++.+....+|..+++.++..+.+..+||+.+.+.+++
T Consensus 83 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (352)
T cd06174 83 FASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAIL 162 (352)
T ss_pred HhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 8899999999999999998875 455678999999999999999999999999999999999888888999999998887
Q ss_pred HHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCccccccccccccccccc
Q 011756 173 AFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKS 252 (478)
Q Consensus 173 ~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (478)
.++..+...++| |+
T Consensus 163 ~~~~~~~~~~~~--~~---------------------------------------------------------------- 176 (352)
T cd06174 163 GLLLALLLLFLL--RL---------------------------------------------------------------- 176 (352)
T ss_pred HHHHHHHHHHHH--HH----------------------------------------------------------------
Confidence 776655554443 00
Q ss_pred ccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHH
Q 011756 253 GFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLT 332 (478)
Q Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 332 (478)
.+......+.....+.....+.+.+.... .+.++...........++.+++.+.
T Consensus 177 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~i~~~~ 230 (352)
T cd06174 177 ----------------LLLLALAFFLLSFGYYGLLTYLPLYLQEV----------LGLSAAEAGLLLSLFGLGGILGALL 230 (352)
T ss_pred ----------------HHHHHHHHHHHHhHHHHHHHHHHHHHHHh----------cCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 00011111111111222222222221110 0111122222344556778889999
Q ss_pred HHHHHhhhchHH-HHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHH
Q 011756 333 AALLVDRVGRKL-SMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVG 411 (478)
Q Consensus 333 ~~~l~dr~GRr~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~ 411 (478)
.+++.||+|||+ .+..+..+..+.........+.+..........+.....++....+..|..|++.|++..|+.+...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (352)
T cd06174 231 GGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFG 310 (352)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHH
Confidence 999999999999 8777766555544444333322222222223333333445677889999999999999999999999
Q ss_pred hHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHH
Q 011756 412 RIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVIL 450 (478)
Q Consensus 412 ~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 450 (478)
++++.++|.+.+.+.+..+....+.+.+++.+++.+..+
T Consensus 311 ~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 311 SLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 999999999998887666666667777777776655544
No 47
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.90 E-value=4.4e-20 Score=183.78 Aligned_cols=351 Identities=15% Similarity=0.146 Sum_probs=217.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHhhhh-hcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHH
Q 011756 26 GLALAYSGLGWFSEAMEVMILSFVGPAVKS-EWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFV 87 (478)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i 87 (478)
++.+....++.......-+..+...+.+.+ |+++|++|.+++.++..++..+ +..+.+++++
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 345666777788888888889998888766 8999999999999987665433 4556666777
Q ss_pred HHHHHhhh-----chHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHH-----H
Q 011756 88 AGLLSAFS-----PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWI-----V 156 (478)
Q Consensus 88 ~~~~~~~a-----~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~-----~ 156 (478)
.++..+++ +|+.++++.|++.|++ |.. .+....+++++|+++||++.++.....++|..+++.+.-. +
T Consensus 113 ~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l 191 (462)
T PRK15034 113 PCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPV 191 (462)
T ss_pred HHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 77778876 8999999999999997 444 4556779999999999999999965555666544433321 1
Q ss_pred h-------------cCcchHHHHHHhhHHHHHHHHHHHh-cCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCC
Q 011756 157 M-------------PILTWRWLLALSAIPAFVLLIFIVF-MPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSD 222 (478)
Q Consensus 157 ~-------------~~~~WR~~f~i~~i~~~l~~~~~~~-lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 222 (478)
. +..+||...++-.++.++..+..++ +++.|. .|.+.+|
T Consensus 192 ~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~---~~~~~~~------------------------ 244 (462)
T PRK15034 192 FAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS---SRASIAD------------------------ 244 (462)
T ss_pred HHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc---cccCHHH------------------------
Confidence 1 1345888887777766655444433 433221 0000000
Q ss_pred CCCCcccccCCCCcccccccccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCccc
Q 011756 223 GTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSS 302 (478)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 302 (478)
....+++|+ ++++..++++....|.+...+.|.+....
T Consensus 245 ---------------------------------~~~vlk~~~----~Wllslly~~tFG~fvg~s~~lp~~~~~~----- 282 (462)
T PRK15034 245 ---------------------------------QLPVLQRLH----LWLLSLLYLATFGSFIGFSAGFAMLAKTQ----- 282 (462)
T ss_pred ---------------------------------HHHHhCCCc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 011122232 23333444444334444444444433110
Q ss_pred ccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH--hhch---hHHHHHHHHHHH
Q 011756 303 SILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV--TLQS---NILLTALLSGAR 377 (478)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~ 377 (478)
.+.........+..+...+...++|+++||+|||+++.++.....++..... ...+ ........+...
T Consensus 283 -------~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l 355 (462)
T PRK15034 283 -------FPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGL 355 (462)
T ss_pred -------cChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHH
Confidence 1111222223444566677788999999999999988877654444332211 1111 111111112222
Q ss_pred HHhhh-hhhhhhhhcccccCc---------------------ChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccc-hhHH
Q 011756 378 MFSMG-TFIIANIFAPEIYPT---------------------SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-QTAA 434 (478)
Q Consensus 378 ~~~~g-~~~~~~~~~~E~~p~---------------------~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~-~~~~ 434 (478)
+...| .++..+-+++..||. +.-|...|+....|.+|+++-|.+++...+..+ ....
T Consensus 356 ~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~ 435 (462)
T PRK15034 356 FLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGA 435 (462)
T ss_pred HHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHH
Confidence 22222 244567777788874 146788999999999999999988887776654 3456
Q ss_pred HHHHHHHHHHHHHHHHhcc
Q 011756 435 ILLLEALIVLSVVVILLIP 453 (478)
Q Consensus 435 ~~~~~~~~~i~~~~~~~~~ 453 (478)
+..+.+..+++.++.+.+.
T Consensus 436 ~~~~~~~~~~~~~~~w~~y 454 (462)
T PRK15034 436 MKVFLIFYIVCVLLTWLVY 454 (462)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 7777777777777777653
No 48
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.90 E-value=4.1e-20 Score=183.93 Aligned_cols=344 Identities=13% Similarity=0.095 Sum_probs=207.8
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhh
Q 011756 33 GLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFS 95 (478)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a 95 (478)
.++.+..+..........|.+++|+|.+..+.|++.+...+|..+ +..+.+++.++.++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~ 88 (382)
T PRK10091 9 ALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLS 88 (382)
T ss_pred HHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHh
Confidence 344555666666777788999999999999999999998877655 556677778888889999
Q ss_pred chHHHHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHH
Q 011756 96 PNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAF 174 (478)
Q Consensus 96 ~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~ 174 (478)
+|++.+++.|++.|++.|... ....++.|+.|+++|++.++....+..+|..+++.++..+.+..+||+.|.+.++..+
T Consensus 89 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~ 168 (382)
T PRK10091 89 SSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNI 168 (382)
T ss_pred CcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHH
Confidence 999999999999999988753 4455678999999999999999999999999999998888788899999999887666
Q ss_pred HHHH-HHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccccccc
Q 011756 175 VLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSG 253 (478)
Q Consensus 175 l~~~-~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (478)
+..+ .++++||.++ +.+. +. +
T Consensus 169 ~~~~~~~~~lp~~~~----~~~~-~~------------------------------------~----------------- 190 (382)
T PRK10091 169 AVLASIYFWVPDIRD----EAKG-GL------------------------------------R----------------- 190 (382)
T ss_pred HHHHHHHHhCCCCCc----cccc-CH------------------------------------H-----------------
Confidence 5543 4556787542 0000 00 0
Q ss_pred cchhhcccCcchHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHH
Q 011756 254 FSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIV-LLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLT 332 (478)
Q Consensus 254 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 332 (478)
..++.+++++.+. .....+.....++... ...+.+.... +.+............++.+++.++
T Consensus 191 -~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------g~s~~~~~~~~~~~~~~~~ig~~~ 254 (382)
T PRK10091 191 -EQFHFLRSPAPWL----IFAATMFGNAGVFAWFSYIKPYMMFIS-----------GFSETSMTFIMMLVGLGMVLGNLL 254 (382)
T ss_pred -HHHHHhcChHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhc-----------CCCHHHHHHHHHHHHHHHHHHhHH
Confidence 0001111122111 1111111111111111 1112221110 111111122234555678889999
Q ss_pred HHHHHhhhchHHHHHHHHHHHHHHHHHHHh-hchhHHHHHHHHHHHHHhhhhhhh-hhhhcccccCcChhHHHHHHHHHH
Q 011756 333 AALLVDRVGRKLSMTIMFIFVCIFLLPLVT-LQSNILLTALLSGARMFSMGTFII-ANIFAPEIYPTSMRSTGAGVAYAV 410 (478)
Q Consensus 333 ~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~E~~p~~~R~~~~g~~~~~ 410 (478)
.+++.||+|||+.+..+..+..+..+.+.. ....+......+.......+.... ......+..|.+.++.+. .+..
T Consensus 255 ~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 332 (382)
T PRK10091 255 SGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIA 332 (382)
T ss_pred HheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHH
Confidence 999999999999877665544433322222 222222111111111111111221 223444555656665553 4667
Q ss_pred HhHhHhHHHHHHHHHhhcc-chhHHHHHHHHHHHHHHHHHHhc
Q 011756 411 GRIGGMVCPLVAVGLVTSC-HQTAAILLLEALIVLSVVVILLI 452 (478)
Q Consensus 411 ~~lg~~~~p~~~~~l~~~~-~~~~~~~~~~~~~~i~~~~~~~~ 452 (478)
.++|+.++|.+.+.+.+.. +....+...+..+++.......+
T Consensus 333 ~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 333 FNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred HHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHH
Confidence 7899999999998887753 33344544444444444344444
No 49
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.89 E-value=8.4e-21 Score=192.92 Aligned_cols=377 Identities=12% Similarity=0.082 Sum_probs=219.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHH
Q 011756 22 GKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALV 84 (478)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~ 84 (478)
|.|+|.++..+.++......++..++...|.+.+++|++.++.+++.+.+.++..+ ++.+.++
T Consensus 14 ~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 93 (455)
T TIGR00892 14 GGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLL 93 (455)
T ss_pred CCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHH
Confidence 56788888888888888888888888999999999999999999998887654332 4556667
Q ss_pred HHHHHHHHhhhchHHHHHH-HHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcch
Q 011756 85 TFVAGLLSAFSPNYISLLI-LRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTW 162 (478)
Q Consensus 85 ~~i~~~~~~~a~~~~~l~~-~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~W 162 (478)
..++.++++++++++.+++ .|++.|++.|.. .+...++.|++| ++|+++.++.+.+..+|..+++.+...+.+.+||
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gw 172 (455)
T TIGR00892 94 ASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGW 172 (455)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhCh
Confidence 7777888889999998875 579999998864 444566778886 7899999999999999999999988888888899
Q ss_pred HHHHHHhhHHHHHHHHHHHh-cCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccc
Q 011756 163 RWLLALSAIPAFVLLIFIVF-MPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLS 241 (478)
Q Consensus 163 R~~f~i~~i~~~l~~~~~~~-lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (478)
|+.|++.++..++..+..++ .|+.++.. +.+.++ + ++. ..+. .. ++.+...
T Consensus 173 r~~f~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~-~---------~~~-------~~~~----~~--~~~~~~~--- 224 (455)
T TIGR00892 173 RGSFLILGGLLLHCCVCGALMRPVGPSQR--VSKSKS-K---------EGL-------PPDG----ST--KKLSKKS--- 224 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcccc--cccccc-c---------ccC-------CCCC----cc--ccccccc---
Confidence 99999998776655443333 33322110 000000 0 000 0000 00 0000000
Q ss_pred cccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHH
Q 011756 242 SARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFI 321 (478)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (478)
..+ ...+..+++.+.+++++. .....+...+.++....+.+.+....+ .+....-....+
T Consensus 225 --~~~---~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~l~~~~~~~g-----------~s~~~~g~~~~~ 284 (455)
T TIGR00892 225 --TAE---KINRFLDFSLFTHRGFLV----YLSGNVIMFLGFFAPIIFLVPYAKDKG-----------VDEYEAAFLLSI 284 (455)
T ss_pred --hhh---hhhhhcchHHhcCchHHH----HHHHHHHHHHHccchHHHHHHHHHHcC-----------CCHHHHHHHHHH
Confidence 000 000011122222233321 111112222233333333332221111 111111122334
Q ss_pred HHhhhhhHHHHHHHHHhhh--chHHHHHH--HHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCc
Q 011756 322 TSFAELPGLLTAALLVDRV--GRKLSMTI--MFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPT 397 (478)
Q Consensus 322 ~~~~~~~g~~~~~~l~dr~--GRr~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~ 397 (478)
..++.+++.++++++.||. ++|+.... +....++..+......+.+..........+......+..+....|.+|.
T Consensus 285 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~ 364 (455)
T TIGR00892 285 IGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGA 364 (455)
T ss_pred HHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhH
Confidence 4566677788889999973 33433222 2222222222222222222222212222222223344567788899999
Q ss_pred ChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHH
Q 011756 398 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-QTAAILLLEALIVLSVV 447 (478)
Q Consensus 398 ~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~-~~~~~~~~~~~~~i~~~ 447 (478)
+.|+++.|+.+....+|++++|.+.+.+.+..+ ....+.+.+++.+++.+
T Consensus 365 ~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 365 QRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 999999999999999999999999887776543 33445554444444433
No 50
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.89 E-value=2.7e-19 Score=178.00 Aligned_cols=151 Identities=16% Similarity=0.266 Sum_probs=124.0
Q ss_pred HHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhchHH
Q 011756 37 FSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFSPNYI 99 (478)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a~~~~ 99 (478)
+.............|.+++|+|+++++.+++.+.+.+|..+ +..+.++..++.+..++++++.
T Consensus 15 ~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 94 (385)
T TIGR00710 15 ILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIE 94 (385)
T ss_pred HHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHH
Confidence 45556666666778999999999999999999998876554 4556666777778888899999
Q ss_pred HHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHHH
Q 011756 100 SLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLI 178 (478)
Q Consensus 100 ~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~l~~~ 178 (478)
.+++.|++.|++.+.. +...+++.|+.|+++|++..+..+....+|..+++.++..+.++.+||+.|++.++..++..+
T Consensus 95 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 174 (385)
T TIGR00710 95 TLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSA 174 (385)
T ss_pred HHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 9999999999998875 455678899999999999999999999999999999998888888999999988776665543
Q ss_pred -HHHhcCCCc
Q 011756 179 -FIVFMPESP 187 (478)
Q Consensus 179 -~~~~lpESP 187 (478)
..++.||++
T Consensus 175 ~~~~~~~~~~ 184 (385)
T TIGR00710 175 LIFFILPETL 184 (385)
T ss_pred HHHHhCCCCC
Confidence 445577764
No 51
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.89 E-value=2.6e-21 Score=194.12 Aligned_cols=352 Identities=17% Similarity=0.236 Sum_probs=216.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHHh-hhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHH
Q 011756 23 KFQGLALAYSGLGWFSEAMEVMILSFVGPA-VKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALV 84 (478)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~ 84 (478)
|-.+.++.+.+..++....|+..++...-. ++.|.++..++.+.+.+++++|+++ +....+.
T Consensus 41 K~dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~ 120 (495)
T KOG2533|consen 41 KLDLFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGIL 120 (495)
T ss_pred HHHHHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHH
Confidence 344456666777788888888766654322 5678889999999999999999877 4455666
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHH------h
Q 011756 85 TFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIV------M 157 (478)
Q Consensus 85 ~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~------~ 157 (478)
+++.+++++...|++.+++.|++.|+..++.. ....++.-|..+++||+.++++..+.++|.+++++++..+ .
T Consensus 121 w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~ 200 (495)
T KOG2533|consen 121 WGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSG 200 (495)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCC
Confidence 77777777889999999999999999998874 4566789999999999999999999999999999999885 3
Q ss_pred cCcchHHHHHHhhHHHHHH-HHHHHhcCCCch--hhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCC
Q 011756 158 PILTWRWLLALSAIPAFVL-LIFIVFMPESPR--YLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTS 234 (478)
Q Consensus 158 ~~~~WR~~f~i~~i~~~l~-~~~~~~lpESP~--~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (478)
...||||+|.+.++..++. ++..+++|+.|. |..++++.+-+ .++.++.+.++ .
T Consensus 201 ~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~---~~~~~~~~~~~--------------------~ 257 (495)
T KOG2533|consen 201 GLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELV---VERLRESPSGG--------------------I 257 (495)
T ss_pred CcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHH---HHHHHhccCCC--------------------c
Confidence 4579999999999877776 456778999998 43332221111 11221111000 0
Q ss_pred Ccccccccccccccccccccchhhcc-cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccch
Q 011756 235 EETPLLSSARKRTTVRKSGFSSFLML-FSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDA 313 (478)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 313 (478)
+++ .+..++++. +.++ ++...+..++.....|+...|.|.+..... +.+..
T Consensus 258 ~~~--------------~~~~~~~~a~~dp~----vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~----------~~s~~ 309 (495)
T KOG2533|consen 258 ENK--------------FKWKGFKEALKDPG----VWPFSLCYFFLKLVNYGFSYWLPLYLKSNG----------GYSEL 309 (495)
T ss_pred ccc--------------cCHHHHHHHHhchh----HHHHHHHHHHHhhccccHHHHHHHHHHcCC----------CcChH
Confidence 000 001122222 2233 333444455555556666666666543211 01111
Q ss_pred hhHHHHHHHHhhhhhHHHHHHHHHhh----hchHHHHHHHHHHHHHHH-HHHHhhchhHHHHHHHHHHHHHhhhhhhhhh
Q 011756 314 SVYINVFITSFAELPGLLTAALLVDR----VGRKLSMTIMFIFVCIFL-LPLVTLQSNILLTALLSGARMFSMGTFIIAN 388 (478)
Q Consensus 314 ~~~~~~~~~~~~~~~g~~~~~~l~dr----~GRr~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 388 (478)
......+...++++++.+++++++|| ..+|........+..... ..+.................+.......+..
T Consensus 310 ~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (495)
T KOG2533|consen 310 QANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIAL 389 (495)
T ss_pred HhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHH
Confidence 11122344567788899999999999 455555444333222222 1111111122122212222222223344566
Q ss_pred hhcccccCcChhHHHHHHHHHHH-hHhHhHHHHHHHHH
Q 011756 389 IFAPEIYPTSMRSTGAGVAYAVG-RIGGMVCPLVAVGL 425 (478)
Q Consensus 389 ~~~~E~~p~~~R~~~~g~~~~~~-~lg~~~~p~~~~~l 425 (478)
.+.++....+.|......++..+ ..+++++|.+....
T Consensus 390 ~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~ 427 (495)
T KOG2533|consen 390 SWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSL 427 (495)
T ss_pred hhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccc
Confidence 77777777777666655555554 45677777665433
No 52
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.89 E-value=4.9e-20 Score=181.62 Aligned_cols=330 Identities=14% Similarity=0.096 Sum_probs=205.3
Q ss_pred HHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhc-
Q 011756 35 GWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFSP- 96 (478)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a~- 96 (478)
+.+...+.........|....|++.++.+.+++.+...++..+ ++.+.++..++.++.++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 86 (365)
T TIGR00900 7 AQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVAL 86 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455556666667778888888999999999999988776544 3444555556666666666
Q ss_pred ----hHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhH
Q 011756 97 ----NYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAI 171 (478)
Q Consensus 97 ----~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i 171 (478)
|++.+++.|++.|++.+.. +...+++.|+.|+++|++..++.+....+|.++++.++..+.+..+||+.|++.++
T Consensus 87 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~ 166 (365)
T TIGR00900 87 LGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAV 166 (365)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 9999999999999988875 45567899999999999999999999999999999999888888899999998887
Q ss_pred HHHHHHHHHHhc--CCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccc
Q 011756 172 PAFVLLIFIVFM--PESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTV 249 (478)
Q Consensus 172 ~~~l~~~~~~~l--pESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (478)
..++..+..+.+ ||+++. ++. + . +++.. + +
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~----~~~-~----------------------------~-------~~~~~-~---~---- 198 (365)
T TIGR00900 167 GFAISALLIVSVRIPELAAS----EIQ-A----------------------------L-------SNAVL-R---D---- 198 (365)
T ss_pred HHHHHHHHHHhcccccCCCc----ccc-c----------------------------c-------chhHH-H---H----
Confidence 666554433332 332210 000 0 0 00000 0 0
Q ss_pred cccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhh
Q 011756 250 RKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIV-LLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELP 328 (478)
Q Consensus 250 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (478)
..+.++.+++++..+........ ....+++.. .+.|.+.... .+.+............++.++
T Consensus 199 ---~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 262 (365)
T TIGR00900 199 ---TREGIKFVLKNPLLRTLLLLALL---FNLVFAPAIVALFPYVQSKY----------LGRGSTHYGWVLAAFGLGALL 262 (365)
T ss_pred ---HHhHHHHHHcCcHHHHHHHHHHH---HHHHHHHHHHHHhHHHHHHH----------hCCchHHHHHHHHHHHHHHHH
Confidence 00112223333222222211111 111111111 2222221100 001111111223344566788
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhch-hHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHH
Q 011756 329 GLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS-NILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVA 407 (478)
Q Consensus 329 g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~ 407 (478)
+.++.+++.||.|||+.+..+....++.........+ .+......+...+......+....+..|..|++.|+++.|+.
T Consensus 263 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (365)
T TIGR00900 263 GALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQ 342 (365)
T ss_pred HHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 8899999999999999877765544444333333222 222222222222222233455678889999999999999999
Q ss_pred HHHHhHhHhHHHHHHHHHhhc
Q 011756 408 YAVGRIGGMVCPLVAVGLVTS 428 (478)
Q Consensus 408 ~~~~~lg~~~~p~~~~~l~~~ 428 (478)
+.+.++++.++|.+.+.+.+.
T Consensus 343 ~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 343 FSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988877654
No 53
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.89 E-value=2.8e-19 Score=179.42 Aligned_cols=167 Identities=19% Similarity=0.144 Sum_probs=134.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHH
Q 011756 22 GKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALV 84 (478)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~ 84 (478)
++..+...+.+.++.+...++...+....|.+.+|+++++.+.++..+.+.++... +..+..+
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 87 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAF 87 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 45555666677777788888887778888899999999999999999888776544 4456666
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchH
Q 011756 85 TFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWR 163 (478)
Q Consensus 85 ~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR 163 (478)
..++.+..+++++++.+++.|++.|++.+.. +...+++.|..|+++|++..++......+|..+++.++..+.++.+||
T Consensus 88 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~ 167 (406)
T PRK15402 88 FILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWR 167 (406)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcc
Confidence 7777778888999999999999999988765 455677899999999999999988888888899999888877788999
Q ss_pred HHHHHhhHHHHHHHH-HHHhcCCCch
Q 011756 164 WLLALSAIPAFVLLI-FIVFMPESPR 188 (478)
Q Consensus 164 ~~f~i~~i~~~l~~~-~~~~lpESP~ 188 (478)
+.|++.++..++..+ ....+||+++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 168 GMFVLFAALAALSFFGLWRAMPETAG 193 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 999988877666544 3445777653
No 54
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.89 E-value=1.5e-20 Score=184.37 Aligned_cols=325 Identities=26% Similarity=0.380 Sum_probs=204.7
Q ss_pred HHHHHHHHHHHHHHHhHH-hhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhh
Q 011756 34 LGWFSEAMEVMILSFVGP-AVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFS 95 (478)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a 95 (478)
++.+++.++........| .+.+++|.++++.+++.+...++..+ +..+.++..++.++..++
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~ 82 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA 82 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh
Confidence 556778888888888888 89999999999999999988776444 455566666665555566
Q ss_pred chHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHH
Q 011756 96 PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAF 174 (478)
Q Consensus 96 ~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~ 174 (478)
+|++.+++.|++.|++.+.. +....++.|+.|+++|++..+..+....+|.++++.++..+.+..+||+.|++.++..+
T Consensus 83 ~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~ 162 (352)
T PF07690_consen 83 SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSL 162 (352)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHH
T ss_pred hhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhh
Confidence 88889999999999998765 45667899999999999999999999999999999999988888899999999998887
Q ss_pred HHHHH-HHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccccccc
Q 011756 175 VLLIF-IVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSG 253 (478)
Q Consensus 175 l~~~~-~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (478)
+..+. ..+++|+|+....+.+ .+++ .++ +++
T Consensus 163 ~~~il~~~~~~~~~~~~~~~~~---------------------------~~~~-------~~~--------------~~~ 194 (352)
T PF07690_consen 163 IAAILFILFLPEPPPPRERESP---------------------------KESE-------SKK--------------PKP 194 (352)
T ss_dssp HHHHHHHCCC---STTTT--SS---------------------------TTTT---------H--------------HHC
T ss_pred hhhhhHhhhhhhcccccccccc---------------------------cccc-------ccc--------------ccc
Confidence 77553 3556655431100000 0000 000 000
Q ss_pred cch-hhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCcc-chhhHHHHHHHHhhhhhHHH
Q 011756 254 FSS-FLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQ-DASVYINVFITSFAELPGLL 331 (478)
Q Consensus 254 ~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~ 331 (478)
..+ ++.+++++... ......+...+.++....+.|.+.... .+.+ .........+..+..+++.+
T Consensus 195 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (352)
T PF07690_consen 195 LKPGFKSLFKNPVLW---ILLIAFFLFFFVFSGFSFFLPLYLQEV----------LGFSGPSQAGLLFSIFGIVGIIGSL 261 (352)
T ss_dssp CCH-CTHHHHHHCCH---HHHHHHHHHHHHHHHHHHHHHHHCCHH----------HHCCTHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccchhh---hhhhhhhHHHHHHHHhhcccchhhhhc----------cCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 111 22222222111 122222222333333444444321100 0111 11111223444566677788
Q ss_pred HHHHHHhhhchHHHHHHHHHHHHHHHHHHHh---hchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHH
Q 011756 332 TAALLVDRVGRKLSMTIMFIFVCIFLLPLVT---LQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAY 408 (478)
Q Consensus 332 ~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~ 408 (478)
+.+++.||+|+|+..........+..+.... ..+............+.....++....+..|..|++.|+++.|+.+
T Consensus 262 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 341 (352)
T PF07690_consen 262 LAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFN 341 (352)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHH
T ss_pred HHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999877655544333332222221 1112222222222222233345667889999999999999999999
Q ss_pred HHHhHhHhHHH
Q 011756 409 AVGRIGGMVCP 419 (478)
Q Consensus 409 ~~~~lg~~~~p 419 (478)
..+++++.++|
T Consensus 342 ~~~~~~~~igP 352 (352)
T PF07690_consen 342 SIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHCC
Confidence 99999999987
No 55
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.88 E-value=1e-18 Score=175.10 Aligned_cols=365 Identities=15% Similarity=0.125 Sum_probs=204.7
Q ss_pred HHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------H
Q 011756 16 LTFMGFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------I 78 (478)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~ 78 (478)
++++|+.|.-....+...+..+.++... ++..| +.+|+|+++.+.|++.+.+.++..+ +
T Consensus 6 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l 81 (402)
T TIGR00897 6 LQKIGIPLNLLWGYIGVVVFMTGDGLEQ---GWLSP-FLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTM 81 (402)
T ss_pred HHHcCCCchhhHHHHHHHHHHHhhhhHH---HhHHH-HHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH
Confidence 4556665555554444433333344333 33334 4478899999999999988776444 3
Q ss_pred HHHHHHHHHHHHHH---hh-hchHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHH-HHHHHH
Q 011756 79 LGGALVTFVAGLLS---AF-SPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGS-VSEAAL 152 (478)
Q Consensus 79 ~~~~~~~~i~~~~~---~~-a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~-~~~~~~ 152 (478)
..+..+..+++++. ++ .+|+..+++.|++.|+|.+.. +....++.|..|+++||+++++.+.+..+|. ++++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~ 161 (402)
T TIGR00897 82 MIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYY 161 (402)
T ss_pred HHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444555554433 23 368889999999999987664 3445677899999999999999999999996 578888
Q ss_pred HHHHhcCcchHHHHHHhhHHHHHHH-HHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCccccc
Q 011756 153 AWIVMPILTWRWLLALSAIPAFVLL-IFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEF 231 (478)
Q Consensus 153 ~~~~~~~~~WR~~f~i~~i~~~l~~-~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (478)
+..+.+..||+..++.......+.. +..+..+|.|+ +++ ++ ++
T Consensus 162 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~----------------------~~------~~- 205 (402)
T TIGR00897 162 SSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFT-------PQH----------------------MQ------TR- 205 (402)
T ss_pred HHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCC-------ccc----------------------cc------CC-
Confidence 8777777886655444332222222 22223333211 000 00 00
Q ss_pred CCCCcccccccccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCcc
Q 011756 232 STSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQ 311 (478)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 311 (478)
.+.++. + +..+.+++.+ +.+......+.+...+++...+.|.+.+..+ .+
T Consensus 206 --~~~~~~-----------~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g-----------~s 255 (402)
T TIGR00897 206 --EKFSEL-----------G---KAATILFTNP---NVLLGGMVRIINTIGLFGFAVFLPMFVAELG-----------FS 255 (402)
T ss_pred --cchhhH-----------H---HHHHHHHcCh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------CC
Confidence 000000 0 0111222221 1122222333344455555555554432211 11
Q ss_pred chhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHH-HHHHHHHHHHHHH---h--hchhHHHHHHHHHHHHHhhhhhh
Q 011756 312 DASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTI-MFIFVCIFLLPLV---T--LQSNILLTALLSGARMFSMGTFI 385 (478)
Q Consensus 312 ~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~-~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~g~~~ 385 (478)
............++.+++.+..++++||+|||+.... +.....+....+. . ..+............++..+ ..
T Consensus 256 ~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~-~~ 334 (402)
T TIGR00897 256 TSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAG-YV 334 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHH-HH
Confidence 1111112234456788899999999999999886532 2222222111111 1 11111111111112121112 22
Q ss_pred hhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhc
Q 011756 386 IANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 452 (478)
Q Consensus 386 ~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 452 (478)
.......|..| +.|+++.|+.+...++++.++|.+.+.+.+..+....+.+.+++.+++.+...|.
T Consensus 335 ~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 335 PLAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 23344567655 6899999999999999999999999988887776667777777777776666554
No 56
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.88 E-value=4.7e-19 Score=177.81 Aligned_cols=352 Identities=15% Similarity=0.136 Sum_probs=210.2
Q ss_pred HHHHHHHHHHHHHHHhHHhhhhhcCCCcchh-----hHHHHHHHHHHHH-----------------HHHHHHHHHHHHHH
Q 011756 34 LGWFSEAMEVMILSFVGPAVKSEWGLSSSEE-----SLITTVVFAGMMS-----------------ILGGALVTFVAGLL 91 (478)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~ 91 (478)
++.+..++.........|.+.+++|++..+. |++.+...++..+ ++.+.+...++.++
T Consensus 21 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 100 (408)
T PRK09874 21 LGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVL 100 (408)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHH
Confidence 4455566666666677888888899886653 6666665544333 44455556666677
Q ss_pred HhhhchHHHHHHHHHHhhcccCchhhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhH
Q 011756 92 SAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAI 171 (478)
Q Consensus 92 ~~~a~~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i 171 (478)
.++++|++.+++.|++.|++.+..+....++.|..|+++||+..+....+..+|.++++.++..+.+..+||+.|++.++
T Consensus 101 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 180 (408)
T PRK09874 101 MGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITAS 180 (408)
T ss_pred HHHHhhHHHHHHHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 77889999999999999987554444556788999999999999999999999999999999888888899999998887
Q ss_pred HHHHHHH-HHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCccccccccccccccc
Q 011756 172 PAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVR 250 (478)
Q Consensus 172 ~~~l~~~-~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (478)
..++..+ ..+++||+++-. .+.++ . +.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~---~~~~~-~----------------------------------~~-------------- 208 (408)
T PRK09874 181 VLFLCFLVTLFCIRENFQPV---SKKEM-L----------------------------------HM-------------- 208 (408)
T ss_pred HHHHHHHHHHHHhccCcccc---cchhh-h----------------------------------HH--------------
Confidence 6665543 445566654210 00000 0 00
Q ss_pred ccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchh--hHHHHHHHHhhhhh
Q 011756 251 KSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDAS--VYINVFITSFAELP 328 (478)
Q Consensus 251 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 328 (478)
+ .....+.+++.+.......... .........+.+.+..... ....... ......+..++.+.
T Consensus 209 ~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~g~~~~~~~l~~~~ 273 (408)
T PRK09874 209 R---EVVTSLKNPKLVLSLFVTTLII---QVATGSIAPILTLYVRELA---------GNVSNIAFISGMIASVPGVAALL 273 (408)
T ss_pred H---HHHHhCcCCchHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHh---------ccchHHHHHHHHHHHHHHHHHHH
Confidence 0 0001111222222111111111 0111011111111100000 0000000 00111223455566
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHH
Q 011756 329 GLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAY 408 (478)
Q Consensus 329 g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~ 408 (478)
+....+++.||+|||+.+..+.....+..+......+.+..........+......+.......+..|.+.|++..|+.+
T Consensus 274 ~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 353 (408)
T PRK09874 274 SAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQ 353 (408)
T ss_pred HHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHH
Confidence 77788899999999998877665554433333332222222222122222222223444556678889999999999999
Q ss_pred HHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhc
Q 011756 409 AVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 452 (478)
Q Consensus 409 ~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 452 (478)
.+..+|..++|.+.+.+.+..+....+.+.+++.+++.+..++.
T Consensus 354 ~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 354 SFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888776666667777777777766665554
No 57
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.88 E-value=1.4e-18 Score=177.93 Aligned_cols=351 Identities=17% Similarity=0.114 Sum_probs=210.7
Q ss_pred HHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHH-------HHHHH--------------HHHHHHHHHHHHHHHhh
Q 011756 36 WFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVF-------AGMMS--------------ILGGALVTFVAGLLSAF 94 (478)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~-------~G~~~--------------~~~~~~~~~i~~~~~~~ 94 (478)
.+..+......+...|...++.|.+.++.+....... +|-.. +..+.+...++..+.++
T Consensus 21 ~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~ 100 (491)
T PRK11010 21 GFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGF 100 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 3567777778888888888888999888887622211 12111 23344444444445555
Q ss_pred h---chHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhc-CcchHHHHHHh
Q 011756 95 S---PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP-ILTWRWLLALS 169 (478)
Q Consensus 95 a---~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~-~~~WR~~f~i~ 169 (478)
. ++++.+.+.|++.|++.+.. ....++..|++|+++||+..++...++.+|.++++.++..+.+ ..|||..|++.
T Consensus 101 ~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~ 180 (491)
T PRK11010 101 LEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLM 180 (491)
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHH
Confidence 4 47888999999999877654 4556789999999999999999999999999999998888877 57999999999
Q ss_pred hHHHHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccc
Q 011756 170 AIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTV 249 (478)
Q Consensus 170 ~i~~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (478)
++..++..+..+++||+|+.. +.++. .+ ++
T Consensus 181 a~l~ll~~l~~~~~~e~~~~~----~~~~~----------------------------------~~-~~----------- 210 (491)
T PRK11010 181 AALLIPCIIATLLAPEPTDTI----PVPKT----------------------------------LE-QA----------- 210 (491)
T ss_pred HHHHHHHHHHHHhcCCCcccc----ccccc----------------------------------hh-hh-----------
Confidence 887777666666788876420 00000 00 00
Q ss_pred cccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhCCCCCcccccccccCccchhhHHH-HHHHHhhhh
Q 011756 250 RKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLL-ASELSGSQSKCSSSILLSENVQDASVYIN-VFITSFAEL 327 (478)
Q Consensus 250 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 327 (478)
...+++++++++...........+ ....+....+ .+.+.... +.+....-.. .....++.+
T Consensus 211 ---~~~~l~~~~~~~~~~~~ll~~~l~---~~~~~~~~~~~~~~l~~~~-----------G~s~~~~g~~~~~~g~i~~i 273 (491)
T PRK11010 211 ---VVAPLRDFFGRNNAWLILLLIVLY---KLGDAFAMSLTTTFLIRGV-----------GFDAGEVGLVNKTLGLLATI 273 (491)
T ss_pred ---HHHHHHHHHcCcCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhc-----------CCCHHHHHHHHHHHHHHHHH
Confidence 000122233222111111111111 1111111111 22221111 1111111111 123345778
Q ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH---HHhhchhH-HHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHH
Q 011756 328 PGLLTAALLVDRVGRKLSMTIMFIFVCIFLLP---LVTLQSNI-LLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTG 403 (478)
Q Consensus 328 ~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~ 403 (478)
+|.+++++++||+|||+.+..+.....+..+. .....++. ......+...+......+..+.+..++.|.+.+++.
T Consensus 274 iG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~ 353 (491)
T PRK11010 274 VGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQ 353 (491)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHH
Confidence 99999999999999988766544433322211 11211121 111111111111111224457778899999999999
Q ss_pred HHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhcc
Q 011756 404 AGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIP 453 (478)
Q Consensus 404 ~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 453 (478)
.|+.+....+|+.+++.+.+.+.+..+....|.+.+++++.+.+..+++.
T Consensus 354 ~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 354 FALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888888876665667777777777766666553
No 58
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.88 E-value=1.3e-18 Score=173.79 Aligned_cols=347 Identities=13% Similarity=0.118 Sum_probs=191.4
Q ss_pred HHHHHHHHHHHHHhH-HhhhhhcCCCcchhhHHHHHH-HHHHHH-----------------HHHHHHHHHHHHHHHhhhc
Q 011756 36 WFSEAMEVMILSFVG-PAVKSEWGLSSSEESLITTVV-FAGMMS-----------------ILGGALVTFVAGLLSAFSP 96 (478)
Q Consensus 36 ~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~s~~-~~G~~~-----------------~~~~~~~~~i~~~~~~~a~ 96 (478)
.+++..-........ +.+++|+++++++.|++.+.. ..+... +..+.+...++..+.++++
T Consensus 24 ~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 103 (393)
T PRK15011 24 AFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTLFAWNR 103 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhh
Confidence 344444444434433 446889999999999987654 334322 2233444455566677889
Q ss_pred hHHHHHHHHHHh-hcccCchhhHHHHHhhccCCCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHH
Q 011756 97 NYISLLILRGLA-GAGLGSGHVFFSWFMEFVPPSNR--GKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPA 173 (478)
Q Consensus 97 ~~~~l~~~R~l~-Gig~g~~~~~~~~~~E~~p~~~R--g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~ 173 (478)
+++++++.|.+. |.+....+....+..|+.|+++| +...+..+.+.++|.+++++++..+.++.|||..|++.++..
T Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~ 183 (393)
T PRK15011 104 NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAF 183 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHH
Confidence 998876655544 44433234445566777777666 455688888999999999999998888889999999988766
Q ss_pred HHHHH-HHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCccccccccccccccccc
Q 011756 174 FVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKS 252 (478)
Q Consensus 174 ~l~~~-~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (478)
++..+ ..+++||+|+- +++ + + + +.+.. + ++
T Consensus 184 ~~~~~~~~~~~~~~~~~---~~~--~-------------------------~----~-----~~~~~-----~-----~~ 214 (393)
T PRK15011 184 IVCGVMVWLFLPSMRKE---LPL--A-------------------------T----G-----TLEAP-----R-----RN 214 (393)
T ss_pred HHHHHHHHhhcCccCCC---Ccc--c-------------------------c----c-----ccccc-----c-----cc
Confidence 65543 45567887530 000 0 0 0 00000 0 00
Q ss_pred ccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHH
Q 011756 253 GFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLT 332 (478)
Q Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 332 (478)
++..+.........+ ..++....+.|.+.... .+.+.............+.+++.++
T Consensus 215 ---------~~~~~~~~~~~~~~~----~~~~~~~~~~p~~l~~~----------~~~~~~~~g~~~~~~~~~~i~~~~~ 271 (393)
T PRK15011 215 ---------RRDTLLLFVICTLMW----GTNSLYIINMPLFIINE----------LHLPEKLAGVMMGTAAGLEIPTMLI 271 (393)
T ss_pred ---------cccHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH----------cCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 000111111111111 11122222233221100 0011111111122333456778899
Q ss_pred HHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHh
Q 011756 333 AALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGR 412 (478)
Q Consensus 333 ~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~ 412 (478)
.++++||+|||+.+..+.....+.........+.+..........+......+..+.+..|.+|.+ |+++.++.+...+
T Consensus 272 ~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~-~g~~~~~~~~~~~ 350 (393)
T PRK15011 272 AGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ-AGSATTLYTNTSR 350 (393)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-cchHHHHHHHHHH
Confidence 999999999999776554433332222222222222111111111111111233456678999865 9999999999999
Q ss_pred HhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccc
Q 011756 413 IGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 456 (478)
Q Consensus 413 lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet 456 (478)
+|+.++|.+.+.+.+..+....+.+.+++.+++.+..++ .||+
T Consensus 351 lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~ 393 (393)
T PRK15011 351 VGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR-IKDV 393 (393)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh-hcCC
Confidence 999999999888777655545555555565665544444 3553
No 59
>PRK11043 putative transporter; Provisional
Probab=99.87 E-value=3.5e-18 Score=171.23 Aligned_cols=310 Identities=12% Similarity=0.171 Sum_probs=189.7
Q ss_pred HHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhchHHHHHHHHHH
Q 011756 45 ILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFSPNYISLLILRGL 107 (478)
Q Consensus 45 ~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l 107 (478)
......|.+++++++++++.+++.+++.+|..+ +..+..+..++.++.+++++++.+++.|++
T Consensus 24 ~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 103 (401)
T PRK11043 24 MYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFV 103 (401)
T ss_pred HHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 334456778899999999999999998877555 455566667777788889999999999999
Q ss_pred hhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHHHHHHhcCCC
Q 011756 108 AGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPES 186 (478)
Q Consensus 108 ~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~l~~~~~~~lpES 186 (478)
.|++.+... ....++.|+.|+++|++..+.......+|..+++.++..+.++.+||+.|++.++..++..+..++++|+
T Consensus 104 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (401)
T PRK11043 104 QAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPS 183 (401)
T ss_pred HHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999877653 3456788999999999999888888888999999998888888899999999888777666555666665
Q ss_pred chhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccccccccchhhccc-Ccch
Q 011756 187 PRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRF 265 (478)
Q Consensus 187 P~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~ 265 (478)
++. .+.++.+ .+.++.+ ++++
T Consensus 184 ~~~----~~~~~~~------------------------------------------------------~~~~~~~~~~~~ 205 (401)
T PRK11043 184 KKA----RKQSQDA------------------------------------------------------LTFKQLLKSKTY 205 (401)
T ss_pred CCc----cccchHH------------------------------------------------------HHHHHHHcChhH
Confidence 420 0000000 0111111 2222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHH
Q 011756 266 FKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLS 345 (478)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~ 345 (478)
+..... .......++....+.|.+....+ .+....-.......++.++|.+..+++.||+|||+.
T Consensus 206 ~~~~~~----~~~~~~~~~~~~~~~p~~~~~~g-----------~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~ 270 (401)
T PRK11043 206 LGNVLI----FAACSAAFFAWLTGSPFILEQMG-----------YSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQL 270 (401)
T ss_pred HHHHHH----HHHHHHHHHHHHHHhHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 221111 11111222223333333221111 111111111223345567788888999999999986
Q ss_pred HHHHHHHHHHHHH---HHHhh-chhHH-HHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHH
Q 011756 346 MTIMFIFVCIFLL---PLVTL-QSNIL-LTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPL 420 (478)
Q Consensus 346 ~~~~~~~~~~~~~---~~~~~-~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~ 420 (478)
.........+... ..... .+... .........+.....++.......|..| +.|+++.|+.+.++..++..++.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~ 349 (401)
T PRK11043 271 LPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASL 349 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHH
Confidence 5443332222211 11111 11111 1111111112222233444555567776 57999999999999988889888
Q ss_pred HHHHHhhc
Q 011756 421 VAVGLVTS 428 (478)
Q Consensus 421 ~~~~l~~~ 428 (478)
+.+.+.+.
T Consensus 350 ~~g~l~~~ 357 (401)
T PRK11043 350 LVSALIST 357 (401)
T ss_pred HHHHccCC
Confidence 88877654
No 60
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.87 E-value=2.7e-18 Score=171.43 Aligned_cols=141 Identities=21% Similarity=0.290 Sum_probs=115.7
Q ss_pred HHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhchHHHHHHHHHHhh
Q 011756 47 SFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFSPNYISLLILRGLAG 109 (478)
Q Consensus 47 ~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G 109 (478)
....|.+.+++|.++.+.++..+.+.+|... +..+.+...++.++...++|+..+++.|++.|
T Consensus 23 ~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g 102 (392)
T PRK10473 23 LVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQG 102 (392)
T ss_pred hhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 3568999999999999999998888766444 45566666777778888999999999999999
Q ss_pred cccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHHH-HHHhcCCCc
Q 011756 110 AGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESP 187 (478)
Q Consensus 110 ig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~l~~~-~~~~lpESP 187 (478)
++.+... ....++.|..|+++|++..+..+....+|..+++.++..+.+..+||+.|++.++..++..+ ..+++||++
T Consensus 103 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 103 IGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred hhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9888753 45678899999999999999999999999999999988877778999999998876665533 455677764
No 61
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.86 E-value=3.2e-18 Score=170.26 Aligned_cols=336 Identities=16% Similarity=0.131 Sum_probs=202.0
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhh
Q 011756 32 SGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAF 94 (478)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~ 94 (478)
..++.++...+........|.+.+|+|.++.+.|++.+.+.+|..+ +..+.++..++.++.++
T Consensus 11 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~ 90 (381)
T PRK03633 11 LLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGL 90 (381)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3366778889988999999999999999999999999999887555 45566666777778888
Q ss_pred hchHHHHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHH
Q 011756 95 SPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPA 173 (478)
Q Consensus 95 a~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~ 173 (478)
++|++.+++.|+++|++.|... .....+.|..|+++||+..+.+..+..+|..+++.++..+.+...|+..+....+..
T Consensus 91 ~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 170 (381)
T PRK03633 91 MVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVTGLVLA 170 (381)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHHH
Confidence 9999999999999999988753 444567788999999999999999999999999999887655433333222211111
Q ss_pred HHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccccccc
Q 011756 174 FVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSG 253 (478)
Q Consensus 174 ~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (478)
.+..+.....||+++ + + + +.+
T Consensus 171 ~~~~~~~~~~~~~~~---------------------------------~-~----~-----~~~---------------- 191 (381)
T PRK03633 171 AILPLLFTRILNQQA---------------------------------E-N----H-----DST---------------- 191 (381)
T ss_pred HHHHHHHhcccCCCC---------------------------------C-C----C-----CCC----------------
Confidence 111111111111100 0 0 0 000
Q ss_pred cchhhc-ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHH
Q 011756 254 FSSFLM-LFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLT 332 (478)
Q Consensus 254 ~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 332 (478)
+..+ +.+++.+.. ....+.. ...+.....+.|.+....+ .+............++.+++.+.
T Consensus 192 --~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~lp~~~~~~g-----------~s~~~~g~~~~~~~~~~~~~~~~ 254 (381)
T PRK03633 192 --SIWPMLKLRQARLG-VNGCIIS---GIVLGSLYGLMPLYLNHQG-----------MSDASIGFWMALLVSAGILGQWP 254 (381)
T ss_pred --CHHHHHHhcchHHH-HHHHHHH---HHHHHHHHHHHHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHhh
Confidence 0001 112222211 1111111 1111111122232221111 11111111223444667888999
Q ss_pred HHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHh
Q 011756 333 AALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGR 412 (478)
Q Consensus 333 ~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~ 412 (478)
.+++.||+|||+.+..+.....+...... .. ........ ..........+....+..|..|.+.++...+..+....
T Consensus 255 ~g~l~dr~~~~~~l~~~~~~~~~~~~~~~-~~-~~~~~~~~-l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (381)
T PRK03633 255 IGRLADRFGRLLVLRVQVFVVILGSIAML-SQ-AAMAPALF-ILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYT 331 (381)
T ss_pred hHHHHHHcCcHHHHHHHHHHHHHHHHHHh-hh-HHHHHHHH-HHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 99999999999987766544433222221 11 11111111 11111223345667778899998888888888777788
Q ss_pred HhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 011756 413 IGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSV 446 (478)
Q Consensus 413 lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~ 446 (478)
+|+.++|.+.+.+.+..+....+.+.+++.++..
T Consensus 332 lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~ 365 (381)
T PRK03633 332 VGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYL 365 (381)
T ss_pred HHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHH
Confidence 9999999999988877665566666666655544
No 62
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.86 E-value=2.3e-21 Score=185.69 Aligned_cols=167 Identities=25% Similarity=0.316 Sum_probs=145.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHH
Q 011756 22 GKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALV 84 (478)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~ 84 (478)
++..++.+++.++.-+.+.+|+..+..+.+.++..||+++++.|++++.+.++.++ +..+..+
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~i 107 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFI 107 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHH
Confidence 45555666677788899999999999999999999999999999999998877655 5668889
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcc-h
Q 011756 85 TFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILT-W 162 (478)
Q Consensus 85 ~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-W 162 (478)
|.++++.+++++.|+++.++|.+.|+|++.. +++.+.+++.+|..+|+++.++++...++|..+|.+++..+.+..+ |
T Consensus 108 W~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~W 187 (493)
T KOG1330|consen 108 WTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWW 187 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccce
Confidence 9999999999999999999999999999886 5678899999999999999999999999999998888877766555 9
Q ss_pred HHHHHHhhHHHHHH-HHHHHhcCCCch
Q 011756 163 RWLLALSAIPAFVL-LIFIVFMPESPR 188 (478)
Q Consensus 163 R~~f~i~~i~~~l~-~~~~~~lpESP~ 188 (478)
||.|...++.++++ ++.+++.+|.+|
T Consensus 188 r~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 188 RWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred EEEEEeehHHHHHHHHHHHhhccCccc
Confidence 99999999888877 445667788754
No 63
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.86 E-value=7e-19 Score=167.49 Aligned_cols=359 Identities=19% Similarity=0.211 Sum_probs=225.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHH-HHHHH----------------HHHHHHHH
Q 011756 23 KFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVF-AGMMS----------------ILGGALVT 85 (478)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~-~G~~~----------------~~~~~~~~ 85 (478)
+-|.+.+....+......+--+..+...+.+++|+++|+.|.+++.+... .|... ...+.++.
T Consensus 10 ~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~ 89 (417)
T COG2223 10 RIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLL 89 (417)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHH
Confidence 34445555555555555556677788889999999999999999988853 34333 44555565
Q ss_pred HHHHHHHhhhch---HHHHHHHHHHhhcccCchhhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcc-
Q 011756 86 FVAGLLSAFSPN---YISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILT- 161 (478)
Q Consensus 86 ~i~~~~~~~a~~---~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~- 161 (478)
.+-.+..+++.+ ++++++++.+.|++-|...+..++.++++||+++|.++++.. .-++|..+...++-.+....+
T Consensus 90 ~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~ 168 (417)
T COG2223 90 LIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGF 168 (417)
T ss_pred HHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhh
Confidence 666666666654 459999999999987777777778999999999999999999 666777766666555544556
Q ss_pred --hHHHHHHhhHHHHHHHH-HHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCccc
Q 011756 162 --WRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETP 238 (478)
Q Consensus 162 --WR~~f~i~~i~~~l~~~-~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (478)
||....+-.++.++..+ .++.+.|.|+...++++.+ .
T Consensus 169 ~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~-------------------------------~--------- 208 (417)
T COG2223 169 LAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL-------------------------------P--------- 208 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc-------------------------------h---------
Confidence 99988887777776544 4555666655310000000 0
Q ss_pred ccccccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHH
Q 011756 239 LLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYIN 318 (478)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (478)
.+++..++ .+.++.+.+.++...-.+-++..+.|.+...+. ..+....-..
T Consensus 209 ----------------~~~~~v~~---~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~f----------g~~~~~Ag~~ 259 (417)
T COG2223 209 ----------------AQLKAVFS---NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQF----------GLSPVTAGLI 259 (417)
T ss_pred ----------------hHHHHHhc---CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCChhhHHHH
Confidence 01111111 123444555555544444455555554432211 1111111112
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhc-------hhHHHHHHHHHHHHHhhhhhhhhhhhc
Q 011756 319 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ-------SNILLTALLSGARMFSMGTFIIANIFA 391 (478)
Q Consensus 319 ~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~g~~~~~~~~~ 391 (478)
.....+.+...-.++|+++||+|.|+.+...+..++++........ +.............+....++..+-.+
T Consensus 260 a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~I 339 (417)
T COG2223 260 AFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMI 339 (417)
T ss_pred HHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeec
Confidence 2333344455567899999999999988777766655544433321 111111112222222222345678888
Q ss_pred ccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHhc
Q 011756 392 PEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-QTAAILLLEALIVLSVVVILLI 452 (478)
Q Consensus 392 ~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~-~~~~~~~~~~~~~i~~~~~~~~ 452 (478)
+.+||. .-+...|+...+|.+|++.-|...+...+..+ ....+.++..+.+++.+..+..
T Consensus 340 p~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 340 PVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred hHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 888875 67888899999999999999998888877766 4567777888777777666654
No 64
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.86 E-value=2.3e-19 Score=177.37 Aligned_cols=158 Identities=19% Similarity=0.275 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHHHHHHHHhHHh-hhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHH
Q 011756 31 YSGLGWFSEAMEVMILSFVGPA-VKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLS 92 (478)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~ 92 (478)
..+++.+....+....+...|. +++++|+++.+.+++.+...++..+ +..+.++..++.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~ 84 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWA 84 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 4556667777888888889995 9999999999999999998776554 455677777788888
Q ss_pred hhhc-hHHHHHHHHHHhhcccCchhhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhc----------Ccc
Q 011756 93 AFSP-NYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP----------ILT 161 (478)
Q Consensus 93 ~~a~-~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~----------~~~ 161 (478)
++++ +++.+++.|++.|++.+...+...++.|+.|+++|++..++......+|..+++.++..+.. +.+
T Consensus 85 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~ 164 (366)
T TIGR00886 85 GLAVQSYSVLLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLA 164 (366)
T ss_pred HHHhhhHHHHHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 8899 99999999999999855444556788999999999999999987777777766666543322 348
Q ss_pred hHHHH-HHhhHHH-HHHHHHHHhcCCCch
Q 011756 162 WRWLL-ALSAIPA-FVLLIFIVFMPESPR 188 (478)
Q Consensus 162 WR~~f-~i~~i~~-~l~~~~~~~lpESP~ 188 (478)
||+.| ...++.. +...+...+.||+|+
T Consensus 165 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (366)
T TIGR00886 165 WGWAFVIVPAGILLLPALLIFFVGADTPP 193 (366)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhcccCCc
Confidence 99999 4434433 333445556778764
No 65
>PRK10133 L-fucose transporter; Provisional
Probab=99.86 E-value=6.7e-18 Score=170.60 Aligned_cols=345 Identities=14% Similarity=0.103 Sum_probs=202.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHH
Q 011756 22 GKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALV 84 (478)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~ 84 (478)
++.....+....+..+.-++++...+...|.+++++++++.+.+++.+.+.+|..+ +..+.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~ 100 (438)
T PRK10133 21 SRSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFL 100 (438)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 34455555555566677788889999999999999999999999999999887666 4556667
Q ss_pred HHHHHHHH---hhhchHHHHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHh---
Q 011756 85 TFVAGLLS---AFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVM--- 157 (478)
Q Consensus 85 ~~i~~~~~---~~a~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~--- 157 (478)
+.++.+++ ++++|+..++++|+++|+|.|... ....++.|+.|+++|++.++..+..+.+|..+++.++..+.
T Consensus 101 ~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~ 180 (438)
T PRK10133 101 YALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSN 180 (438)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 77777654 568999999999999999998764 45667788877887777899999999999999988765432
Q ss_pred -c--------------C--------cchHHHHHHhh-HHHHHHHH-HHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCC
Q 011756 158 -P--------------I--------LTWRWLLALSA-IPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQT 212 (478)
Q Consensus 158 -~--------------~--------~~WR~~f~i~~-i~~~l~~~-~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~ 212 (478)
+ . .+||++|+... +..++.++ ....+||.|. ++.+
T Consensus 181 ~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~-----~~~~--------------- 240 (438)
T PRK10133 181 VPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQS-----DNHS--------------- 240 (438)
T ss_pred CcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----cccc---------------
Confidence 0 0 25666765433 33333322 2333454211 0000
Q ss_pred CCCCCCCCCCCCCCcccccCCCCcccccccccccccccccccchhhccc-CcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011756 213 SLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLAS 291 (478)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (478)
++ .+ .+. ..+.+.++ +|+++...+.. .. .....++...|.+
T Consensus 241 ---------------~~----~~-~~~--------------~~~~~~ll~~~~~~~~~l~~-~~---~~~~~~~~~~~~~ 282 (438)
T PRK10133 241 ---------------DA----KQ-GSF--------------SASLSRLARIRHWRWAVLAQ-FC---YVGAQTACWSYLI 282 (438)
T ss_pred ---------------cc----cc-cch--------------hhhHHHHHhCchHHHHHHHH-HH---HHHHHHHHHHHHH
Confidence 00 00 000 00111222 23333222211 11 1122222222222
Q ss_pred hh-hCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHH
Q 011756 292 EL-SGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLT 370 (478)
Q Consensus 292 ~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (478)
.+ .... .+.+....-.......++.+.|...++++.||+|||+.+..+..+.+..++......... ..
T Consensus 283 ~~l~~~~----------~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~ 351 (438)
T PRK10133 283 RYAVEEI----------PGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GL 351 (438)
T ss_pred HHHhhhc----------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HH
Confidence 11 1100 011111112223445567788999999999999999987776555443332222222211 12
Q ss_pred HHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccc-hhHHHHH
Q 011756 371 ALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-QTAAILL 437 (478)
Q Consensus 371 ~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~-~~~~~~~ 437 (478)
..+....++....++..+....|.+|.+ .+++.++.. ++.+|+.+.|.+.+.+.+..+ ....+++
T Consensus 352 ~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v 417 (438)
T PRK10133 352 IALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELI 417 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHH
Confidence 2222333344456677888888988864 567777775 455778888888787766544 2344443
No 66
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.85 E-value=7e-18 Score=167.49 Aligned_cols=141 Identities=18% Similarity=0.330 Sum_probs=116.4
Q ss_pred HHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhchHHHHHHHHHHhh
Q 011756 47 SFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFSPNYISLLILRGLAG 109 (478)
Q Consensus 47 ~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G 109 (478)
....|.+.+++|+++++.+++.+++.++..+ +..+.++..++.+...+++++..+++.|++.|
T Consensus 11 ~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g 90 (377)
T PRK11102 11 LPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHG 90 (377)
T ss_pred hccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 3556788889999999999999988776544 45566667777778888999999999999999
Q ss_pred cccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHH-HHHHhcCCCc
Q 011756 110 AGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLL-IFIVFMPESP 187 (478)
Q Consensus 110 ig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~l~~-~~~~~lpESP 187 (478)
++.+.. +...+++.|+.|+++|++..++.+....+|..+++.++..+.+..+||+.|.+.++..++.. +..+++||++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 91 LAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETL 170 (377)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 988765 34567889999999999999999999999999999998888888899999998887766653 4456677764
No 67
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.85 E-value=7.4e-18 Score=168.18 Aligned_cols=351 Identities=13% Similarity=0.062 Sum_probs=203.4
Q ss_pred HHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhc
Q 011756 34 LGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFSP 96 (478)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a~ 96 (478)
++.++..+......+..+...+|++.++.+.+++.+.+.++... ++.+.+++.++++.+++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~ 89 (393)
T PRK11195 10 AAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGI 89 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHH
Confidence 45566665333345555566788998998999999988776555 5556666666666666666
Q ss_pred hHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHHH
Q 011756 97 NYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFV 175 (478)
Q Consensus 97 ~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~l 175 (478)
+. ++.|+++|++.+.. +...+++.|++|+++|++++++.+....+|.+++|.+++.+.+. .|+..+.+.+...++
T Consensus 90 ~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~ 165 (393)
T PRK11195 90 HP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLL 165 (393)
T ss_pred HH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 64 78999999998876 45677899999999999999999999999999999999887664 488887776655554
Q ss_pred HHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccccccccc
Q 011756 176 LLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFS 255 (478)
Q Consensus 176 ~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (478)
..+....+||+|+.. +++.++..+.++... .
T Consensus 166 ~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~-----------------------------------------------~ 196 (393)
T PRK11195 166 AALFNLFIPRLGARR--PGQSWNPIALLRDFF-----------------------------------------------H 196 (393)
T ss_pred HHHHHhcCCCCcccc--cccCCCHHHHHHHHH-----------------------------------------------H
Confidence 455566789876421 000000000000000 0
Q ss_pred hhhcccCcchHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHH
Q 011756 256 SFLMLFSPRFFKTTIL-LWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAA 334 (478)
Q Consensus 256 ~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 334 (478)
..+.+++++..+.... ....+.......+....+.+...+ .+....-.......++.++|.+..+
T Consensus 197 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg--------------~s~~~~G~~~~~~~~g~i~g~~~~~ 262 (393)
T PRK11195 197 ACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALG--------------ITLNQPAYLQAVVAIGIAVGAGAAA 262 (393)
T ss_pred HHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------------CChhHHHHHHHHHHHHHHHHHHHHH
Confidence 1112222222222222 122222222223333333332211 1111111223445567788888889
Q ss_pred HHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh-hHHHHHHHHHHHhH
Q 011756 335 LLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM-RSTGAGVAYAVGRI 413 (478)
Q Consensus 335 ~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~-R~~~~g~~~~~~~l 413 (478)
.+.||.++|+.+..+..+ +...+.+....+.+......+...+..............|.-|.+. +|++.++.+...++
T Consensus 263 ~l~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~ 341 (393)
T PRK11195 263 RLVTLETVLRVLPAGILM-GLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENL 341 (393)
T ss_pred HHhcCCcccchHHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHH
Confidence 999998888876665433 2222222222222212222222222111122334555667666655 79999999999999
Q ss_pred hHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhcc
Q 011756 414 GGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIP 453 (478)
Q Consensus 414 g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 453 (478)
+..++..+...+ ...+-...+.+.+...+++....+.+.
T Consensus 342 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK11195 342 AMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALLWR 380 (393)
T ss_pred HHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999888877644 333434444444444455555555554
No 68
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.85 E-value=3.3e-19 Score=178.65 Aligned_cols=345 Identities=20% Similarity=0.314 Sum_probs=211.9
Q ss_pred hhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhh--chHHHHHHHHHHhhcccCc
Q 011756 54 KSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFS--PNYISLLILRGLAGAGLGS 114 (478)
Q Consensus 54 ~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a--~~~~~l~~~R~l~Gig~g~ 114 (478)
+.+|+++++|++++.|+++.|.++ +..+.+++++++++.-.+ .+++.+++.|+++|++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 347889999999999999999877 445566666666665433 3455789999999999998
Q ss_pred h-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcC-cchHHHHHHhhHHHHHHHHHH-HhcCCCchhhh
Q 011756 115 G-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPI-LTWRWLLALSAIPAFVLLIFI-VFMPESPRYLC 191 (478)
Q Consensus 115 ~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~-~~WR~~f~i~~i~~~l~~~~~-~~lpESP~~l~ 191 (478)
. +......+.|+|++||++..++...+..+|.+++.++++.+.+. .||+..|++.++.+++..+.+ ++..|+|+-
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~-- 222 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK-- 222 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc--
Confidence 6 45566789999999999999999999999999999999988877 999999999999888875554 556688873
Q ss_pred hcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccccccccchhhcccCcchHHHHHH
Q 011756 192 TKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTIL 271 (478)
Q Consensus 192 ~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 271 (478)
|.+..+.+ ++++.+...+ + .. ++ +.+ .+++.+++. +..+.
T Consensus 223 -h~~is~~E--l~~I~~~k~~----------------~----~~---------~~--~~~---vP~~~i~ts---~~vwa 262 (466)
T KOG2532|consen 223 -HPNISEKE--LKYIEKGKSE----------------A----HV---------KK--KPP---VPYKAILTS---PPVWA 262 (466)
T ss_pred -CCCCCHHH--HHHHHhcccc----------------c----cc---------CC--CCC---CCHHHHHcC---HHHHH
Confidence 22222211 1122111000 0 00 00 001 133334432 13334
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchH--------
Q 011756 272 LWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRK-------- 343 (478)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr-------- 343 (478)
.|+..++....++.+..+.|.+... .+..+..+ ......+..+...+-.+++|.++||+.+|
T Consensus 263 i~~~~f~~~~~~~~l~~y~PtY~~~--------VL~f~v~~--~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~r 332 (466)
T KOG2532|consen 263 IWISAFGGNWGFYLLLTYLPTYLKE--------VLGFDVRE--TGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVR 332 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHH--------HhCCChhh--hhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHH
Confidence 5555555555555555555544321 00111111 11223355566677788999999998552
Q ss_pred HHH-HHHHHHHHHHHHHHHhhch-hH-HHHHHHHHHHHHhhhhhhhhhhhccccc-CcChhHHHHHHHHHHHhHhHhHHH
Q 011756 344 LSM-TIMFIFVCIFLLPLVTLQS-NI-LLTALLSGARMFSMGTFIIANIFAPEIY-PTSMRSTGAGVAYAVGRIGGMVCP 419 (478)
Q Consensus 344 ~~~-~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~g~~~~~~~~~~E~~-p~~~R~~~~g~~~~~~~lg~~~~p 419 (478)
+.+ .++....+++++.+.+..+ +. ....++..... ..|.. ....+.+-.. .++.-+..+|+++.++.+.++++|
T Consensus 333 kifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~-~~g~~-~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P 410 (466)
T KOG2532|consen 333 KIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIG-LSGFN-ISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAP 410 (466)
T ss_pred HHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHH-Hcccc-hhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 222 3444455555555444332 22 22333322222 22222 2222233333 678999999999999999999999
Q ss_pred HHHHHHhhcc---chhHHHHHHHHHHHHHHHHHHhc
Q 011756 420 LVAVGLVTSC---HQTAAILLLEALIVLSVVVILLI 452 (478)
Q Consensus 420 ~~~~~l~~~~---~~~~~~~~~~~~~~i~~~~~~~~ 452 (478)
.+.+.+.... .+...|++.+++.+++.++..++
T Consensus 411 ~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 411 LLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 9988777421 23345666666666665444343
No 69
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.85 E-value=1.1e-17 Score=167.48 Aligned_cols=325 Identities=14% Similarity=0.122 Sum_probs=202.4
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHh
Q 011756 31 YSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSA 93 (478)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~ 93 (478)
..+...+.-+++....+...|.+++++|+++.+.|++.+...+|..+ ++.+.+++.++.++..
T Consensus 7 ~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~ 86 (410)
T TIGR00885 7 LITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFW 86 (410)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 33445566677778888899999999999999999999999887665 4555666666665543
Q ss_pred ---hhchHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhc-----------
Q 011756 94 ---FSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP----------- 158 (478)
Q Consensus 94 ---~a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~----------- 158 (478)
..+|++.+++.|++.|+|.|.. ....+++.|..|+++|++..++.+..+.+|..+++.++..+..
T Consensus 87 ~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~ 166 (410)
T TIGR00885 87 PAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVL 166 (410)
T ss_pred HHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhh
Confidence 3468999999999999999876 4556788899999999999999999999999999988765531
Q ss_pred ---------------CcchHHHHHHhhHHHHHHHHHHHh--cCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCC
Q 011756 159 ---------------ILTWRWLLALSAIPAFVLLIFIVF--MPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTS 221 (478)
Q Consensus 159 ---------------~~~WR~~f~i~~i~~~l~~~~~~~--lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 221 (478)
..+||++|.+.++..++..+...+ +||.++ + ++
T Consensus 167 ~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~-----~--~~----------------------- 216 (410)
T TIGR00885 167 DKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH-----S--DA----------------------- 216 (410)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----c--cc-----------------------
Confidence 136999998888766655443333 333211 0 00
Q ss_pred CCCCCcccccCCCCcccccccccccccccccccchhhcccC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCc
Q 011756 222 DGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS-PRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKC 300 (478)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 300 (478)
+ +.+.. .+.++.++ ++++.. .+..+.+.+... +...+.+.+......
T Consensus 217 -------~------~~~~~--------------~~~~~~~~~~~~~~~-~l~~f~yvg~e~---~~~s~l~~y~~~~~~- 264 (410)
T TIGR00885 217 -------K------QISFS--------------ASLSRLARIRHYREG-VIAQFFYVGVQI---MCWTFIIQYAVRLIP- 264 (410)
T ss_pred -------c------cccch--------------hhHHHHHhChhHHHH-HHHHHHHHHHHH---HHHHHHHHHHhhccC-
Confidence 0 00000 00011111 222221 111122222211 111122221111000
Q ss_pred ccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHh
Q 011756 301 SSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFS 380 (478)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (478)
. ........+ ..........|.++++++.||+++|+.+.++..++.++.+......+... ...+....++.
T Consensus 265 -----~-~~~~~a~~~--~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~glf~ 335 (410)
T TIGR00885 265 -----G-MTAGFAANY--NIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTLCSAFM 335 (410)
T ss_pred -----C-CCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHH
Confidence 0 000001111 11222445789999999999999999877766655554444333332222 22333333455
Q ss_pred hhhhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhc
Q 011756 381 MGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 428 (478)
Q Consensus 381 ~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~ 428 (478)
...|+..+....+.++++.+..+.+++... +|+.+.|.+.+.+.+.
T Consensus 336 s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~ 381 (410)
T TIGR00885 336 SLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDM 381 (410)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHH
Confidence 566788899999999988887777777665 9999999999988773
No 70
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.84 E-value=2.8e-17 Score=165.09 Aligned_cols=159 Identities=18% Similarity=0.203 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHH
Q 011756 30 AYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLS 92 (478)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~ 92 (478)
...++.-+....+........|.+.++++.+.++.++..+.+++|... ++.+.+++.++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 98 (413)
T PRK15403 19 MALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAAT 98 (413)
T ss_pred HHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHH
Confidence 334444455556666667778889999999999999999998887654 556677788888889
Q ss_pred hhhchHHHHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhH
Q 011756 93 AFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAI 171 (478)
Q Consensus 93 ~~a~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i 171 (478)
++++|++.++++|+++|++.+... ....+..|+.|+++|++.+++......+|..+++.++..+.++.|||+.|++.++
T Consensus 99 ~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~ 178 (413)
T PRK15403 99 LFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAV 178 (413)
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 999999999999999999887543 3456688999999999999999999999999999999888778899999999988
Q ss_pred HHHHHHHH-HHhcCCCch
Q 011756 172 PAFVLLIF-IVFMPESPR 188 (478)
Q Consensus 172 ~~~l~~~~-~~~lpESP~ 188 (478)
..++..+. .+++||+++
T Consensus 179 ~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 179 MGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHHHhCCCCcc
Confidence 77766543 456888753
No 71
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.84 E-value=1.4e-16 Score=159.23 Aligned_cols=162 Identities=12% Similarity=0.100 Sum_probs=126.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHH
Q 011756 27 LALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAG 89 (478)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~ 89 (478)
+.+....+......+.........|.+.+++|+++.+.+++.+.+.++..+ +..+.....++.
T Consensus 8 ~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~ 87 (394)
T PRK11652 8 NLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGT 87 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHH
Confidence 333444444445556655666678889999999999999999988777554 455666667777
Q ss_pred HHHhhhchHHHHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHH
Q 011756 90 LLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLAL 168 (478)
Q Consensus 90 ~~~~~a~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i 168 (478)
+...+++|++.+++.|++.|++.+... ....+..|..|+++|++..+..+.+..+|..+++.++..+.+..+||+.|++
T Consensus 88 ~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~ 167 (394)
T PRK11652 88 LVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLF 167 (394)
T ss_pred HHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHH
Confidence 778889999999999999999887653 3445678999999999999999999999999999998888888899999999
Q ss_pred hhHHHHHH-HHHHHhcCCCch
Q 011756 169 SAIPAFVL-LIFIVFMPESPR 188 (478)
Q Consensus 169 ~~i~~~l~-~~~~~~lpESP~ 188 (478)
.++..++. ++..+++||+|+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 168 LLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHHHHHHHHHHHHhCCccCc
Confidence 87766554 344566788753
No 72
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.83 E-value=1e-17 Score=165.11 Aligned_cols=305 Identities=10% Similarity=0.088 Sum_probs=177.6
Q ss_pred HHHHHhHHhhhhhcCCCcchhhHHHHHHHH-------HHHH--------------HHHHHHHHHHHHHHHhhh---chHH
Q 011756 44 MILSFVGPAVKSEWGLSSSEESLITTVVFA-------GMMS--------------ILGGALVTFVAGLLSAFS---PNYI 99 (478)
Q Consensus 44 ~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~-------G~~~--------------~~~~~~~~~i~~~~~~~a---~~~~ 99 (478)
...++..|.+.+|+|++.++.|++.+.... |... ++.+.+...+.....++. .++.
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~ 84 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLVGLPYSLKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLP 84 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHH
Confidence 456778888999999999999988644321 1111 233344444554555566 3555
Q ss_pred HHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcc--------hHHHHHHhh
Q 011756 100 SLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILT--------WRWLLALSA 170 (478)
Q Consensus 100 ~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~--------WR~~f~i~~ 170 (478)
.+...+++.|.+.+.. ++..+++.|++|+|+|+++.++...+..+|.++++.++..+.+..+ ||..|++.+
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~a 164 (356)
T TIGR00901 85 LLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTA 164 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHH
Confidence 6677777777655544 3456789999999999999999999999999999999888777777 999999999
Q ss_pred HHHHHHHHHHHh-cCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccc
Q 011756 171 IPAFVLLIFIVF-MPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTV 249 (478)
Q Consensus 171 i~~~l~~~~~~~-lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (478)
+..++..+..++ .||+++. +.+.++.. ++.
T Consensus 165 i~~l~~~~~~~~~~~e~~~~---~~~~~~~~------------------------------------~~~---------- 195 (356)
T TIGR00901 165 LLILPGLLVTLFLAKEPQED---ASVPKPLT------------------------------------QAV---------- 195 (356)
T ss_pred HHHHHHHHHHHHhccCCCcc---cccchhHH------------------------------------HHH----------
Confidence 877766555543 5775321 00000000 000
Q ss_pred cccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhh-HHHHHHHHhhhhh
Q 011756 250 RKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASV-YINVFITSFAELP 328 (478)
Q Consensus 250 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 328 (478)
...++.+++++..++.+......+.....++....+.+.+.... +.+.... ........+..++
T Consensus 196 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------g~~~~~~g~~~~~~~~~~~~~ 260 (356)
T TIGR00901 196 ----LKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDM-----------GFSKEEIALVAKINGLLGAIL 260 (356)
T ss_pred ----HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------CCCHHHHHHHhHHHHHHHHHH
Confidence 00122222222212222222222233344444433333322111 1111111 1122223345678
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh-----------chhHHHHHHHHHHHHHhhhhhhhhhhhcccccCc
Q 011756 329 GLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL-----------QSNILLTALLSGARMFSMGTFIIANIFAPEIYPT 397 (478)
Q Consensus 329 g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~ 397 (478)
|.++++++.||+|||+.+..+..+..+........ .+.+......+...+.....++....+..|.+|+
T Consensus 261 g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~ 340 (356)
T TIGR00901 261 GGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNP 340 (356)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCC
Confidence 99999999999999988776665444333222211 1112122222222233334556678999999999
Q ss_pred ChhHHHHHHHHHHHh
Q 011756 398 SMRSTGAGVAYAVGR 412 (478)
Q Consensus 398 ~~R~~~~g~~~~~~~ 412 (478)
+.|++..|+.+...+
T Consensus 341 ~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 341 KFGATQMALLSSLSA 355 (356)
T ss_pred CccHHHHHHHHHHHh
Confidence 999999999887654
No 73
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.81 E-value=2.6e-16 Score=157.44 Aligned_cols=139 Identities=14% Similarity=0.115 Sum_probs=109.6
Q ss_pred HHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhchHHHHHHHHHHh
Q 011756 46 LSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFSPNYISLLILRGLA 108 (478)
Q Consensus 46 ~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~ 108 (478)
..+..+.+++++|+++.+.|++.+...++... ++.+.....++.+..+++++++.+++.|++.
T Consensus 30 ~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 109 (400)
T PRK11646 30 FPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILS 109 (400)
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 44455567889999999999998875443222 5556667777777788889999999999999
Q ss_pred hcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHHH-HHHhcCC
Q 011756 109 GAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPE 185 (478)
Q Consensus 109 Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~l~~~-~~~~lpE 185 (478)
|++.+.. +...+++.|++|+++||+..++......+|..+++.++..+. .++||+.|++.++..++..+ ..+++||
T Consensus 110 g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 110 GLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9987654 445677899999999999999999999999999999988877 68999999988776655433 3445555
No 74
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.81 E-value=3.5e-16 Score=157.27 Aligned_cols=351 Identities=12% Similarity=0.057 Sum_probs=192.1
Q ss_pred HHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHhhhchHHHHHHHHH
Q 011756 45 ILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS------------------ILGGALVTFVAGLLSAFSPNYISLLILRG 106 (478)
Q Consensus 45 ~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~------------------~~~~~~~~~i~~~~~~~a~~~~~l~~~R~ 106 (478)
..++..+.+++++|+++.|.|++.+++.++.++ +..+.+...++..+..+.+++..+++.|+
T Consensus 21 ~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (418)
T TIGR00889 21 WLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLL 100 (418)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 345666778888999999999999998877555 33444555566666778889999999999
Q ss_pred HhhcccCchh-hHH----HHHh----hccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHH
Q 011756 107 LAGAGLGSGH-VFF----SWFM----EFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLL 177 (478)
Q Consensus 107 l~Gig~g~~~-~~~----~~~~----E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~l~~ 177 (478)
+.|++.+... ... .+.. |......|.|..+. +|..+++.++..+....+|+.. ++.++..++..
T Consensus 101 l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G~------lG~~ig~~l~g~l~~~~~~~~f-~~~~~~~~~~~ 173 (418)
T TIGR00889 101 ANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMGT------IGFIAAMWAVSLLDIELSNIQL-YITAGSSALLG 173 (418)
T ss_pred HHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeehh------HHHHHHHHHHHHhcccchhHHH-HHHHHHHHHHH
Confidence 9998765432 222 2333 33444456666553 4556666666554333456654 44554444454
Q ss_pred HHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccccccccchh
Q 011756 178 IFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSF 257 (478)
Q Consensus 178 ~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (478)
+..+++||+|+- +++.++ +.. + . . + ....
T Consensus 174 ~~~~~~~e~~~~---~~~~~~---------------------------~~~------~--~------~-----~--~~~~ 202 (418)
T TIGR00889 174 VFALTLPDIPVA---KSTAKM---------------------------SIK------V--M------L-----G--LDAF 202 (418)
T ss_pred HHHhcCCCCCCC---cccccc---------------------------CHH------H--H------h-----h--hhHH
Confidence 556678888641 000000 000 0 0 0 0 0000
Q ss_pred hcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHH
Q 011756 258 LMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLV 337 (478)
Q Consensus 258 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~ 337 (478)
..+++++++.......+....... ++ .+..+.+.+ .+. +... ..............+..+..+++.+..++++
T Consensus 203 ~~~k~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~-~g~--~~~~-~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~ 275 (418)
T TIGR00889 203 ILFKNKRMAIFFFFSMLLGAPLQI-TN--IFGNGFLHE-FGR--NPEF-ADSFVVKNASIWMSLSQFSEIFFILTIPFFL 275 (418)
T ss_pred HHhcCCCeeeHHHHHHHHHhHHHH-HH--HhHHHHHHH-hcc--cccc-cchhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111223322211111111111111 11 111111111 000 0000 0000001111223444566788889999999
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHhhch-h---HHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHH-HHHh
Q 011756 338 DRVGRKLSMTIMFIFVCIFLLPLVTLQS-N---ILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAY-AVGR 412 (478)
Q Consensus 338 dr~GRr~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~-~~~~ 412 (478)
||+|||+++..+....++.......... . +.................+....+.+|.+|++.|++++|+.+ ....
T Consensus 276 dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~ 355 (418)
T TIGR00889 276 KRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNG 355 (418)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHh
Confidence 9999999988877665554333322111 1 111111111111111223445678899999999999999997 4567
Q ss_pred HhHhHHHHHHHHHhhccc------hhHHHHHHHHHHHHHHHHHHhccccccCcc
Q 011756 413 IGGMVCPLVAVGLVTSCH------QTAAILLLEALIVLSVVVILLIPFETKGKE 460 (478)
Q Consensus 413 lg~~~~p~~~~~l~~~~~------~~~~~~~~~~~~~i~~~~~~~~~pet~g~~ 460 (478)
+|+.++|.+.+.+.+..+ +...+.+.+++.++..+..+++.||++++-
T Consensus 356 lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~~ 409 (418)
T TIGR00889 356 FGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNAI 409 (418)
T ss_pred hHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 899999999998877643 345566777777777788888888887653
No 75
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.80 E-value=7.4e-16 Score=153.32 Aligned_cols=342 Identities=14% Similarity=0.032 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH--------------HHHH----HHHHHHHH-HHHhh
Q 011756 34 LGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS--------------ILGG----ALVTFVAG-LLSAF 94 (478)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~--------------~~~~----~~~~~i~~-~~~~~ 94 (478)
++++...+-........|...+|+|.+..+.|++.++..++... .... .....+.. .....
T Consensus 11 ~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~ 90 (382)
T TIGR00902 11 LGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSAG 90 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444444444444556677789999999999998887655332 0101 11111111 23346
Q ss_pred hchHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHH
Q 011756 95 SPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPA 173 (478)
Q Consensus 95 a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~ 173 (478)
+++++.+++.|.++|.+.+.. +...++..|+ +++|++..+......++|.+++++++..+.+++|||..|.+..+..
T Consensus 91 ~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~ 168 (382)
T TIGR00902 91 AHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGL 168 (382)
T ss_pred hhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHH
Confidence 789999999999999877654 4444555554 5788999999999999999999999998888899999998876543
Q ss_pred HHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccccccc
Q 011756 174 FVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSG 253 (478)
Q Consensus 174 ~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (478)
.+.++ ...++|+|+ ++++++ + .+.++
T Consensus 169 ~~~~~-~~~~~~~~~----~~~~~~------------------------------~----~~~~~--------------- 194 (382)
T TIGR00902 169 AFMLI-GFLIKPTIP----PKDAIP------------------------------E----DESQG--------------- 194 (382)
T ss_pred HHHHH-HHHcCCCCC----CCcccc------------------------------c----ccccc---------------
Confidence 32222 333444321 000000 0 00000
Q ss_pred cchhhccc-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHH
Q 011756 254 FSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLT 332 (478)
Q Consensus 254 ~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 332 (478)
.++..+++ +|+.+.-.....+.... ...++ .+.+.+....+ .+....-....+..+..+++...
T Consensus 195 ~~~~~~~l~~~~~~~~l~~~~l~~~~-~~~~~---~~~~~~l~~~g-----------~s~~~~g~l~~~~~~~~i~~~~~ 259 (382)
T TIGR00902 195 DSAFIALLKNPMNLRFLAAVCLIQGA-HAAYY---GFSAIYWQAAG-----------ISASATGLLWGIGVLAEIIIFAF 259 (382)
T ss_pred chhHHHHHcChHHHHHHHHHHHHHHH-HHHHH---HHHHHHHHHCC-----------CCHhHHHHHHHHHHHHHHHHHHH
Confidence 00112222 23333222211221111 11121 12222111111 11111111223455677888899
Q ss_pred HHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHH-H
Q 011756 333 AALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAV-G 411 (478)
Q Consensus 333 ~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~-~ 411 (478)
.+.+.||+|+|+.+..+.....+....+....+.+.....-....+.....++....+.++. |.+.|++++++.+.. .
T Consensus 260 ~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~ 338 (382)
T TIGR00902 260 SNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAM 338 (382)
T ss_pred hHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHH
Confidence 99999999999998887776665544444433333222222222111122233445566677 999999999997654 4
Q ss_pred hHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 011756 412 RIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVV 448 (478)
Q Consensus 412 ~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~ 448 (478)
.+|..++|.+.+.+.+..+ ...|+..+++.+++.++
T Consensus 339 g~g~~~g~~~~G~l~~~~g-~~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 339 GGLIAIFTAFAGFIYPTLG-AGTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHH
Confidence 5788889999998887765 35566666666655433
No 76
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.80 E-value=2.9e-16 Score=178.04 Aligned_cols=355 Identities=13% Similarity=0.022 Sum_probs=196.4
Q ss_pred HHHHHHHHHHhHHhhhhhcCCCcc--hhhHHHHHHHHHHHH-----------------HHHHHHHHHHHH---HHHhhhc
Q 011756 39 EAMEVMILSFVGPAVKSEWGLSSS--EESLITTVVFAGMMS-----------------ILGGALVTFVAG---LLSAFSP 96 (478)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~---~~~~~a~ 96 (478)
...|........+.+..+++.+.. ..+++.+++.++..+ ++.+.++..++. .++..++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~ 101 (1146)
T PRK08633 22 AFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLG 101 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 455666666666777777776544 367778877766544 333333333333 3344567
Q ss_pred hHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcC---------cchHHHH
Q 011756 97 NYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPI---------LTWRWLL 166 (478)
Q Consensus 97 ~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~---------~~WR~~f 166 (478)
+++.++++|++.|++.|.. ++..+++.|++|+++|++++++.+.+..+|.++++.++..+... .+|++.+
T Consensus 102 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~ 181 (1146)
T PRK08633 102 WFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPA 181 (1146)
T ss_pred cHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHH
Confidence 8999999999999988875 45567899999999999999999999999999999998877654 2455555
Q ss_pred HHhhHH-HHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccc
Q 011756 167 ALSAIP-AFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARK 245 (478)
Q Consensus 167 ~i~~i~-~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (478)
.+..+. .++.++..+.+||+|++...+++ . ......
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------~-~~~~~~--------- 218 (1146)
T PRK08633 182 GLVLLAVAVLGLIFAYRLPKVPAAAPEVFD---------------------------------K-KKYLFP--------- 218 (1146)
T ss_pred HHHHHHHHHHHHHHHhcCcCCCCCCccccc---------------------------------c-cccccH---------
Confidence 444433 33344556668888763211000 0 000000
Q ss_pred cccccccccchhhcccCcchHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccch-hhHHHHHHHH
Q 011756 246 RTTVRKSGFSSFLMLFSPRFFKTTIL-LWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDA-SVYINVFITS 323 (478)
Q Consensus 246 ~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 323 (478)
+.....++.+++.+......+ ..+.++... ....+.+.+.... .+.+.. ..........
T Consensus 219 -----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~----------~g~s~~~~~g~~~~~~~ 279 (1146)
T PRK08633 219 -----KLLWRNLKLLRSDRVLWLAIIGLSYFWFISQ----LAQANFPAYAKEV----------LGLDNTFQVQYLLAASA 279 (1146)
T ss_pred -----HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH----HHHHhhHHHHHHH----------hCCCcHHHHHHHHHHHH
Confidence 000012233343333222221 111111111 1111111111000 001111 1112233445
Q ss_pred hhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHH
Q 011756 324 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTG 403 (478)
Q Consensus 324 ~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~ 403 (478)
++.++|.++.+++.||.++|+.+.++..+.++..+.+....+.+...+..+...++........+.+..|..|.+.||++
T Consensus 280 ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~ 359 (1146)
T PRK08633 280 IGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKV 359 (1146)
T ss_pred HHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhh
Confidence 66788899999999999998877666554444333333222222222222222222222334567888899999999999
Q ss_pred HHHHHHHHhHhHhHHHHHHHHHhhc-cchhHHHHHHHHHHHHHHHHHHhcccc
Q 011756 404 AGVAYAVGRIGGMVCPLVAVGLVTS-CHQTAAILLLEALIVLSVVVILLIPFE 455 (478)
Q Consensus 404 ~g~~~~~~~lg~~~~p~~~~~l~~~-~~~~~~~~~~~~~~~i~~~~~~~~~pe 455 (478)
.|+.+.+.++++.+++.+...+... .+....+.+.+.+.++..+......|+
T Consensus 360 ~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (1146)
T PRK08633 360 LAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIGTLYTLLLLPD 412 (1146)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 9999999999887777665433221 112223334444444444444433444
No 77
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.80 E-value=9e-16 Score=153.82 Aligned_cols=153 Identities=18% Similarity=0.093 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHH-------HHHH--------------HHHHHHHHHHHHHHHhh
Q 011756 36 WFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFA-------GMMS--------------ILGGALVTFVAGLLSAF 94 (478)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~-------G~~~--------------~~~~~~~~~i~~~~~~~ 94 (478)
++.++..........|..-+|-|++.+|.|++..+... |... ++.+.+...++....++
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~ 87 (402)
T PRK11902 8 GFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQAYIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAF 87 (402)
T ss_pred HHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 46677777777788888877889999999988666432 2221 33334444444444455
Q ss_pred h---chHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcC-cchHHHHHHh
Q 011756 95 S---PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPI-LTWRWLLALS 169 (478)
Q Consensus 95 a---~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~-~~WR~~f~i~ 169 (478)
. .+++.+++..++.|+..+.. ++..+++.|+.|+|+|++..++...++.+|.++++.++..+.+. .|||..|++.
T Consensus 88 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~ 167 (402)
T PRK11902 88 CPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLM 167 (402)
T ss_pred cCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHH
Confidence 5 35777888887777655544 45567899999999999999999999999999999988877775 5999999998
Q ss_pred hHHHHHHHHHHHhcCCCch
Q 011756 170 AIPAFVLLIFIVFMPESPR 188 (478)
Q Consensus 170 ~i~~~l~~~~~~~lpESP~ 188 (478)
++..++..+..+++||+++
T Consensus 168 a~~~l~~~l~~~~~~e~~~ 186 (402)
T PRK11902 168 AGLMLAGALTTLWAPEPEV 186 (402)
T ss_pred HHHHHHHHHHHHhcCCCcc
Confidence 8776666555667888754
No 78
>PRK10054 putative transporter; Provisional
Probab=99.80 E-value=3.5e-16 Score=156.22 Aligned_cols=329 Identities=13% Similarity=0.098 Sum_probs=189.6
Q ss_pred HHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhchHHHHHHHHHHh
Q 011756 46 LSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFSPNYISLLILRGLA 108 (478)
Q Consensus 46 ~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~ 108 (478)
..+..+.+++++|+++.+.|++.+...++... ++.+.+...++.+..++++|++.++++|++.
T Consensus 27 ~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (395)
T PRK10054 27 LPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALI 106 (395)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 34455667889999999999999987654333 4445555566667778899999999999998
Q ss_pred hcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHHH-HHHhcCCC
Q 011756 109 GAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPES 186 (478)
Q Consensus 109 Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~l~~~-~~~~lpES 186 (478)
|.+.+.. +....++.|..|+++|++..++.....++|..+++.++..+.. .+||..|.+.++..++..+ ..+++||+
T Consensus 107 g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 107 NCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhcc
Confidence 8765543 3456788999999999999999999999999999999887664 6999999988776665533 33446654
Q ss_pred chhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccccccccchhhccc-Ccch
Q 011756 187 PRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRF 265 (478)
Q Consensus 187 P~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~ 265 (478)
++ +++.++ + + +. +.++.+ +++.
T Consensus 186 ~~----~~~~~~-~----------------------------~-----~~-------------------~~~~~~~~~~~ 208 (395)
T PRK10054 186 EK----AIATET-G----------------------------S-----VW-------------------SPSVLLQDKAL 208 (395)
T ss_pred cc----ccccch-h----------------------------h-----hh-------------------hhhhhccCcee
Confidence 32 000000 0 0 00 000111 1222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHH
Q 011756 266 FKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLS 345 (478)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~ 345 (478)
+.......+..+...........+.+... . ...................++.....+.+.||.+||+.
T Consensus 209 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~-----------~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 276 (395)
T PRK10054 209 LWFTCSGFLASFVSGAFASCISQYVMVVA-D-----------SDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPL 276 (395)
T ss_pred hHHHHHHHHHHHHHHHhhhhHHHHHHHhc-c-----------cchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhH
Confidence 22211111111111100000111111110 0 00000111111122223334455677789999999998
Q ss_pred HHHHHHHHHHHHHHHHhh-chhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHH
Q 011756 346 MTIMFIFVCIFLLPLVTL-QSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVG 424 (478)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~ 424 (478)
+..+..+..+....+... .+.+.................+..+....|..|++.|++..+.. +.+++|..++|.+.+.
T Consensus 277 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~-~~~~~G~~~Gp~~~G~ 355 (395)
T PRK10054 277 MTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQ-SLGWLGAAINPLVSGV 355 (395)
T ss_pred HHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHH-HHHHHHHHHHHHHHHH
Confidence 777654444333322222 22221111111111111122334566788999999999999864 4777999999999999
Q ss_pred HhhccchhHHHHHHHHHHHHH
Q 011756 425 LVTSCHQTAAILLLEALIVLS 445 (478)
Q Consensus 425 l~~~~~~~~~~~~~~~~~~i~ 445 (478)
+.+..+....+.+++.+..+.
T Consensus 356 l~~~~g~~~~~~~~~~~~~~~ 376 (395)
T PRK10054 356 ILTTLPPWSLFVILALAIVAA 376 (395)
T ss_pred HHHHcChhhHHHHHHHHHHHH
Confidence 988776555555544444333
No 79
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.79 E-value=1.3e-16 Score=157.21 Aligned_cols=310 Identities=18% Similarity=0.195 Sum_probs=182.0
Q ss_pred HHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhchHHHHHHHHHH
Q 011756 45 ILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFSPNYISLLILRGL 107 (478)
Q Consensus 45 ~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l 107 (478)
..+...|.+++|+|++..+.+++.+...++..+ +..+.++..++.+.. .++++..+++.|++
T Consensus 18 ~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~ 96 (355)
T TIGR00896 18 SVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTAL 96 (355)
T ss_pred cCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHH
Confidence 445678899999999999999999998877555 344444555555555 67899999999999
Q ss_pred hhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCc--chHHHHHHhhHHHHHHHHHHHhcC
Q 011756 108 AGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPIL--TWRWLLALSAIPAFVLLIFIVFMP 184 (478)
Q Consensus 108 ~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~--~WR~~f~i~~i~~~l~~~~~~~lp 184 (478)
.|+|.|... ....+..|+.| ++|+++.+..+.+..+|..+++.+...+.++. +||+.|.+.++..++. ...++|
T Consensus 97 ~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~--~~~~~~ 173 (355)
T TIGR00896 97 IGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLA--LLAWIP 173 (355)
T ss_pred HHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH--HHHHhh
Confidence 999987643 33456678876 68999999999999999999988877665543 4999988766544333 223455
Q ss_pred CCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccccccccchhhccc-Cc
Q 011756 185 ESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SP 263 (478)
Q Consensus 185 ESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~ 263 (478)
|+++ +++ + ++ +. ... ..+..+ ++
T Consensus 174 ~~~~------~~~-----------------~-----~~-----~~-----~~~------------------~~~~~~~~~ 197 (355)
T TIGR00896 174 QVRR------RVA-----------------A-----NQ-----TT-----TRL------------------TPVRIWRSP 197 (355)
T ss_pred hhcc------ccC-----------------C-----CC-----CC-----CCC------------------CCchhhcCH
Confidence 5421 000 0 00 00 000 000111 12
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhh-ch
Q 011756 264 RFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRV-GR 342 (478)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~-GR 342 (478)
+.+. ...........+++...+.|.+....+ .+....-.......++.+++.+..+++.||+ +|
T Consensus 198 ~~~~----~~~~~~~~~~~~~~~~~~lp~~~~~~g-----------~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~ 262 (355)
T TIGR00896 198 LAWQ----VTVFFGLQSGLYYSLIGWLPAILISHG-----------ASAATAGSLLALMQLAQAASALLIPALARRVKDQ 262 (355)
T ss_pred hHHH----HHHHHHHHHHHHHHHHHHHHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccc
Confidence 2221 111222233344444444444332111 1111111223445567888999999999999 45
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcc-cccCcChhHHHHHHHHHHHhHhHhHHHHH
Q 011756 343 KLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAP-EIYPTSMRSTGAGVAYAVGRIGGMVCPLV 421 (478)
Q Consensus 343 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-E~~p~~~R~~~~g~~~~~~~lg~~~~p~~ 421 (478)
|+.+..+..+..+.........+..... ......+.....++....... +..+++.+++..|+.+.++++++.++|.+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~ 341 (355)
T TIGR00896 263 RGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLF 341 (355)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555554444433332222222111111 111111111122333344444 44456778999999999999999999999
Q ss_pred HHHHhhccc
Q 011756 422 AVGLVTSCH 430 (478)
Q Consensus 422 ~~~l~~~~~ 430 (478)
.+.+.+..+
T Consensus 342 ~G~l~~~~g 350 (355)
T TIGR00896 342 VGVLHDISG 350 (355)
T ss_pred HHHHHHHhc
Confidence 888876544
No 80
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.77 E-value=1.3e-15 Score=172.32 Aligned_cols=337 Identities=10% Similarity=-0.043 Sum_probs=190.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhH-HhhhhhcCCCcc-hhhHHHHHHHHHHHH----------------HH----HHHHHH
Q 011756 28 ALAYSGLGWFSEAMEVMILSFVG-PAVKSEWGLSSS-EESLITTVVFAGMMS----------------IL----GGALVT 85 (478)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~-~~~~~~s~~~~G~~~----------------~~----~~~~~~ 85 (478)
+++...++.+.|.++...+.+.. ..+..+.+.++. ..++..+.+.++..+ ++ ...++.
T Consensus 16 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~ 95 (1140)
T PRK06814 16 LFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGI 95 (1140)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHH
Confidence 34444566677777776655443 345444444333 355666666554333 11 122222
Q ss_pred HHHHHHHhhhchHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHH
Q 011756 86 FVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRW 164 (478)
Q Consensus 86 ~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~ 164 (478)
....+.....+|+++++++|+++|++.+.. ++..+++.|++|+++|++++++.+.+..+|.++++.++.++....+||+
T Consensus 96 ~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~ 175 (1140)
T PRK06814 96 AALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVI 175 (1140)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHH
Confidence 223333334589999999999999998865 5667789999999999999999999999999999999999988899999
Q ss_pred HHHHhhHHHHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCccccccccc
Q 011756 165 LLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSAR 244 (478)
Q Consensus 165 ~f~i~~i~~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (478)
.|+...+..++.++..+++||+|.- .+++. . +.. ..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--------------------------------~-----~~~-~~---- 211 (1140)
T PRK06814 176 LVALLMGIAVLGWLASLFIPKTGNA--APDLK--------------------------------I-----DRN-II---- 211 (1140)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCC--CCCCe--------------------------------e-----ccc-hH----
Confidence 9966556666556666677776420 00000 0 000 00
Q ss_pred ccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHh
Q 011756 245 KRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSF 324 (478)
Q Consensus 245 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (478)
++....++..++.+......+. .+...+.++....+.|.+.... .+..............+
T Consensus 212 ------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~----------~g~~~~~~g~~~~~~~~ 272 (1140)
T PRK06814 212 ------RSTITLLKYAKADKRIWLAILG---ISWFWLVGAVVLSQLPLLAKET----------LGGDENVATLFLAVFSV 272 (1140)
T ss_pred ------HHHHHHHHHHhcCchHHHHHHH---HHHHHHHHHHHHHHhHHHHHHH----------cCCchHHHHHHHHHHHH
Confidence 0000122223332222221111 1111111222222333222110 00111111122344456
Q ss_pred hhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh--------------------chhHHHHHHHHHHHHHhhhhh
Q 011756 325 AELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL--------------------QSNILLTALLSGARMFSMGTF 384 (478)
Q Consensus 325 ~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~g~~ 384 (478)
+.++|.++.++++|+.++++.+..+..+.+++.+.+... .+.+...+..+...++.....
T Consensus 273 g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 352 (1140)
T PRK06814 273 GVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYI 352 (1140)
T ss_pred HHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhH
Confidence 778899999999988776665444433332222211110 111212221222222222233
Q ss_pred hhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhh
Q 011756 385 IIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 427 (478)
Q Consensus 385 ~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~ 427 (478)
...+.+..+..|.+.||++.|+.+.++.++..+++.+.+.+..
T Consensus 353 ~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 353 VPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA 395 (1140)
T ss_pred HHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888999999999999999999999999999988776653
No 81
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.76 E-value=1.8e-15 Score=153.37 Aligned_cols=322 Identities=15% Similarity=0.042 Sum_probs=185.5
Q ss_pred HHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHhhhch-
Q 011756 41 MEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS----------------------ILGGALVTFVAGLLSAFSPN- 97 (478)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~----------------------~~~~~~~~~i~~~~~~~a~~- 97 (478)
.......+..+.+.+++|+++.+.|++.++..+...+ ++.+.....++.++...+++
T Consensus 14 ~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~ 93 (437)
T TIGR00792 14 IFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDF 93 (437)
T ss_pred HHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCC
Confidence 3444445667778888999999999999987665444 44555556666665655553
Q ss_pred -----HHHHHHHHHHhhcccCchh-hHHHHHhhcc-CCCCchhHHHHHHHHHHHHHHHHHHHHHHHh-------cCcchH
Q 011756 98 -----YISLLILRGLAGAGLGSGH-VFFSWFMEFV-PPSNRGKWMVVFSTFWTFGSVSEAALAWIVM-------PILTWR 163 (478)
Q Consensus 98 -----~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~-p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~-------~~~~WR 163 (478)
...+++.+++.+++.+... +..++..|.+ ++++|++..++.+.+..+|.++++.+...+. +..+||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~ 173 (437)
T TIGR00792 94 SATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWF 173 (437)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHH
Confidence 4567788888887776543 3445677887 5789999999998888888877766544332 246899
Q ss_pred HHHHHhhHHHHHHHHH-HHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCccccccc
Q 011756 164 WLLALSAIPAFVLLIF-IVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSS 242 (478)
Q Consensus 164 ~~f~i~~i~~~l~~~~-~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (478)
+.+.+.++..++..+. .+..||+|+. ++ + ++ .++.+.
T Consensus 174 ~~~~i~~~l~~~~~~~~~~~~~e~~~~-----~~------------------------~------~~----~~~~~~--- 211 (437)
T TIGR00792 174 MFALVLALIGVVSLIICFFGTKERYSE-----IP------------------------K------NI----EKKLSL--- 211 (437)
T ss_pred HHHHHHHHHHHHHHHHHHcCCEecCCC-----CC------------------------c------cc----ccCCCH---
Confidence 9999888877666443 4456665310 00 0 00 000000
Q ss_pred ccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHH
Q 011756 243 ARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFIT 322 (478)
Q Consensus 243 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (478)
...++.+++.+..+.... ..+.....++....+.+.+.... .+..... .....+.
T Consensus 212 -----------~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~-~~~~~~~ 266 (437)
T TIGR00792 212 -----------KQIFKALFKNDQLLILCL---AYLFYNLAFNIKNGVQVYYFTYV----------LGDPELF-SYMGSIA 266 (437)
T ss_pred -----------HHHHHHHhCCHHHHHHHH---HHHHHHHHHHHHcchhheeEeee----------cCChHHH-HHHHHHH
Confidence 012223333222221111 11111222222111112111100 0001111 1122334
Q ss_pred HhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHhhhhhhhhhhhcccccC-----
Q 011756 323 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ-SNILLTALLSGARMFSMGTFIIANIFAPEIYP----- 396 (478)
Q Consensus 323 ~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p----- 396 (478)
.++.+++.++.++++||+|||+.+..+..+..+..+...... +.+..........+.....++..+.+.+|..|
T Consensus 267 ~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 346 (437)
T TIGR00792 267 IVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWK 346 (437)
T ss_pred HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Confidence 567788899999999999999988777655444333332222 22222222222222222334556777777754
Q ss_pred --cChhHHHHHHHHHHHhHhHhHHHHHHHHHhhcc
Q 011756 397 --TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC 429 (478)
Q Consensus 397 --~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~ 429 (478)
.+.+|+..|+.+.+.++|+.+++.+.+.+.+..
T Consensus 347 ~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 347 TGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGII 381 (437)
T ss_pred cCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 567899999999999999999999988876543
No 82
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.76 E-value=1.1e-14 Score=144.79 Aligned_cols=330 Identities=10% Similarity=-0.028 Sum_probs=178.2
Q ss_pred HHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH--------------H----HHHHHHHHHH-HHHHhhhchHHHHHHH
Q 011756 44 MILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS--------------I----LGGALVTFVA-GLLSAFSPNYISLLIL 104 (478)
Q Consensus 44 ~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~--------------~----~~~~~~~~i~-~~~~~~a~~~~~l~~~ 104 (478)
.......|...+|++.+..+.|++.+++.++... . ....+...+. ......++|++.+++.
T Consensus 21 g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 100 (382)
T PRK11128 21 GVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAVAFWFGAHSFWLLFVA 100 (382)
T ss_pred HHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 3334445666788899999999999998765333 0 0001111111 1223346889999999
Q ss_pred HHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHHHHHHhc
Q 011756 105 RGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFM 183 (478)
Q Consensus 105 R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~l~~~~~~~l 183 (478)
|++.|++.+.. +...++..++ +++|++..+.......+|..++|.++..+.+++|||..|++.++..++..+...+.
T Consensus 101 ~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 178 (382)
T PRK11128 101 IGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQLLR 178 (382)
T ss_pred HHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHcc
Confidence 99999877654 3334444454 45678888888888889999999999998888999999988776544443333344
Q ss_pred CCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccccccccchhhcccC-
Q 011756 184 PESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS- 262 (478)
Q Consensus 184 pESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 262 (478)
||.++ +++.+ ++ ..+ ...++++.++
T Consensus 179 ~~~~~----~~~~~------------------------------~~---~~~-----------------~~~~~~~i~~~ 204 (382)
T PRK11128 179 PTIMP----QGESR------------------------------QQ---ESA-----------------GWPAWKALLKE 204 (382)
T ss_pred CCCCC----ccccc------------------------------cc---ccc-----------------ccchHHHHHcC
Confidence 54311 00000 00 000 0001222333
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhch
Q 011756 263 PRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGR 342 (478)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GR 342 (478)
|+.++-.....+..... .+...+.+.+..+.+ .+..... ....+..+..+++....+++.||+|+
T Consensus 205 ~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~g---------~s~~~~g--~~~~~~~~~~~~~~~~~g~l~~r~~~ 269 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSH----AAYYGFSAIYWQAAG---------YSASTIG--YLWSLGVVAEVLIFAFSNRLFRRWSA 269 (382)
T ss_pred hhHHHHHHHHHHHHHHh----HhHHHHHHHHHHHCC---------CCHhHHH--HHHHHHHHHHHHHHHHHHHHHHHCCH
Confidence 33332222122221111 111111111111111 0011111 11223445677788889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHh-HhHhHHHHH
Q 011756 343 KLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGR-IGGMVCPLV 421 (478)
Q Consensus 343 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~-lg~~~~p~~ 421 (478)
|+.+..+....++..+......+.+......+...+......+....+..+. |.+.+++..++.+...+ +|..++|.+
T Consensus 270 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i 348 (382)
T PRK11128 270 RDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVL 348 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998777665555443333333333222222222111111223344555565 55567888998775544 566889999
Q ss_pred HHHHhhccchhHHHHHHHHHHHHHH
Q 011756 422 AVGLVTSCHQTAAILLLEALIVLSV 446 (478)
Q Consensus 422 ~~~l~~~~~~~~~~~~~~~~~~i~~ 446 (478)
.+.+.+..+. ..++..+++.+++.
T Consensus 349 ~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 349 SGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHhccH-HHHHHHHHHHHHHH
Confidence 8888877653 34555555544443
No 83
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.74 E-value=9e-16 Score=150.38 Aligned_cols=163 Identities=15% Similarity=0.198 Sum_probs=135.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcch-hhHHHHHHHHHHHH-----------------HHHHHHH
Q 011756 23 KFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSE-ESLITTVVFAGMMS-----------------ILGGALV 84 (478)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~s~~~~G~~~-----------------~~~~~~~ 84 (478)
.+....++.|.+|.+.+- |...+++.|.+.+|+|+|++| .|.+.+.++.|+.+ +..+.+.
T Consensus 24 ~W~~~~~~lC~fGF~~e~--R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~ 101 (511)
T TIGR00806 24 SWRVLVLYLCFYGFMAQF--RPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALS 101 (511)
T ss_pred chhHHHHHHHHHHHHHHh--hchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 455567778888866553 667889999999999999999 99999999888766 5667788
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHhhcccCchhhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHH
Q 011756 85 TFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRW 164 (478)
Q Consensus 85 ~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~ 164 (478)
+++.+++.++++++..|.+.|++.|++.|+......++..|+|+++|+++.+++..+..+|.+++++++.. +..+|||+
T Consensus 102 Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~ 180 (511)
T TIGR00806 102 FVCVWLLLLLGTSVWHMQLMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWIS 180 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchh
Confidence 89999999999999999999999999999887667889999999999999999999999999999999888 55689999
Q ss_pred HHHHhhH---HHHHHHHHHHhcCCCch
Q 011756 165 LLALSAI---PAFVLLIFIVFMPESPR 188 (478)
Q Consensus 165 ~f~i~~i---~~~l~~~~~~~lpESP~ 188 (478)
.+-...+ ...+.+++-+++|-.+|
T Consensus 181 y~~Ln~Isl~s~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 181 YSTLNIISLVFMTFSVFLALFLKRPKR 207 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence 7755533 33334566778885544
No 84
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.74 E-value=6.6e-15 Score=148.44 Aligned_cols=133 Identities=12% Similarity=0.086 Sum_probs=86.4
Q ss_pred HHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhH
Q 011756 322 TSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRS 401 (478)
Q Consensus 322 ~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~ 401 (478)
..+...++.+..+++.||+|||+.+..+..+.++.........+.+......................+.+|.+|.+.|+
T Consensus 271 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a 350 (420)
T PRK09528 271 QVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSA 350 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccee
Confidence 34556788999999999999999877766555443333333333332222111111111112233456788999999999
Q ss_pred HHHHH-HHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccc
Q 011756 402 TGAGV-AYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPF 454 (478)
Q Consensus 402 ~~~g~-~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~p 454 (478)
++.+. .+..+.+|++++|.+.+.+.+..+....+...+++.+++.++.++..+
T Consensus 351 ~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~ 404 (420)
T PRK09528 351 TIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLS 404 (420)
T ss_pred eeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 98776 456678999999999998888766666777777776666655555543
No 85
>PTZ00207 hypothetical protein; Provisional
Probab=99.72 E-value=1.2e-14 Score=148.99 Aligned_cols=180 Identities=17% Similarity=0.166 Sum_probs=124.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHH-HHHHHH---------------HHHHHHHHH
Q 011756 23 KFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVV-FAGMMS---------------ILGGALVTF 86 (478)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~-~~G~~~---------------~~~~~~~~~ 86 (478)
.++|.+++...+...+.+. .+..+...|.+++++|++..+.+++.+.. ..|... +..+.+++.
T Consensus 24 ~~Rw~~lva~~~~~~~~g~-~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~ 102 (591)
T PTZ00207 24 PRRFALLVLGAFCSICTSF-MYAFNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIFVLSMTVFC 102 (591)
T ss_pred cchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 4555555544443333333 34556777899999999999998887763 222211 566777888
Q ss_pred HHHHHHhhh------chHHHHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 011756 87 VAGLLSAFS------PNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPI 159 (478)
Q Consensus 87 i~~~~~~~a------~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~ 159 (478)
++.++++++ ++++++++.|++.|+|.+... .....+.+++| ++||++.++...+..+|..+.+.+...+..
T Consensus 103 iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~- 180 (591)
T PTZ00207 103 LGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS- 180 (591)
T ss_pred HHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 888888887 689999999999999977653 34456788986 789999999999999999865554443332
Q ss_pred cchHHHHHHhhHHHHHH-HHHHH--hcCCCchhhhhcCChhHHHHHHHH
Q 011756 160 LTWRWLLALSAIPAFVL-LIFIV--FMPESPRYLCTKGRITDAHNILDK 205 (478)
Q Consensus 160 ~~WR~~f~i~~i~~~l~-~~~~~--~lpESP~~l~~~~~~~~a~~~l~~ 205 (478)
.+|+..|++.++.+++. ++... ..||+|+|..+++|.+|+++..++
T Consensus 181 ~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~ 229 (591)
T PTZ00207 181 DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRL 229 (591)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHh
Confidence 47888887777655544 33333 357888887777666666665433
No 86
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.72 E-value=1.3e-15 Score=154.59 Aligned_cols=406 Identities=17% Similarity=0.165 Sum_probs=228.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHH
Q 011756 22 GKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALV 84 (478)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~ 84 (478)
|-|-|.+++.+++..++..--....+...+.++++++-+..+.+|+.|+....... .+.+.++
T Consensus 41 GG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v 120 (509)
T KOG2504|consen 41 GGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLV 120 (509)
T ss_pred CCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHH
Confidence 56777777666665544433345556678889999999999999999987543222 5667778
Q ss_pred HHHHHHHHhhhchHHHHHHH-HHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcch
Q 011756 85 TFVAGLLSAFSPNYISLLIL-RGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTW 162 (478)
Q Consensus 85 ~~i~~~~~~~a~~~~~l~~~-R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~W 162 (478)
..++.+++.++++++++++. =++.|+|.|..+ +....+..++ +|+|+.++++...+.++|.++-+.+.-.+.+..||
T Consensus 121 ~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~ 199 (509)
T KOG2504|consen 121 AALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGW 199 (509)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCc
Confidence 88888999999999877655 456778888754 3334445454 77899999999999999999999998888899999
Q ss_pred HHHHHHhhHHHHHHHHH-HHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCC---CCccc
Q 011756 163 RWLLALSAIPAFVLLIF-IVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFST---SEETP 238 (478)
Q Consensus 163 R~~f~i~~i~~~l~~~~-~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 238 (478)
|+.+++.+...+-.++. ...-|.+|+-. +. .++..+. ...+.+..+...+.+...+..... .+...
T Consensus 200 r~~~l~~~~~~l~~~~~~~~~rp~~~~~~--~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (509)
T KOG2504|consen 200 RGALLIFGGISLNVLVAGALLRPLSPPKK--PN-EEKDLRN-------SAASVESTPKPVELRISERDSGLKKLSLSNLA 269 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCCC--ch-hhhhhcc-------ccccccccccccccccccCCCCCCcccccchh
Confidence 99999888766555443 34445444421 11 1111111 000000000000000000000000 00000
Q ss_pred ccccccccccccccccchhhcccCcchHH-HHH-HHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhH
Q 011756 239 LLSSARKRTTVRKSGFSSFLMLFSPRFFK-TTI-LLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVY 316 (478)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 316 (478)
..+. .++.....+.+....++..+..+ +.. ..........+.++-+..+.+....+. ...+....
T Consensus 270 ~~~~--~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~-----------g~~~~~aa 336 (509)
T KOG2504|consen 270 TLKR--GPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSL-----------GLSSNDAA 336 (509)
T ss_pred hhhh--CCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----------CCChhhhH
Confidence 0000 00000000000000011111111 111 122222233334444444444443211 12223333
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhchH--HHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhh-hhhhhccc
Q 011756 317 INVFITSFAELPGLLTAALLVDRVGRK--LSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFI-IANIFAPE 393 (478)
Q Consensus 317 ~~~~~~~~~~~~g~~~~~~l~dr~GRr--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~E 393 (478)
....+.++..++|.++.|++.|+-..| .....+.+++++..+......+..... .......+..|.+. .......|
T Consensus 337 ~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~-~~~~~fG~~~g~~~~l~~~i~~~ 415 (509)
T KOG2504|consen 337 FLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLI-VFSILFGFCVGSFSSLTPVILVD 415 (509)
T ss_pred HHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566778899999999999998743 344455555555443333333322211 22222223334333 34568889
Q ss_pred ccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHHHhc
Q 011756 394 IYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQ-TAAILLLEALIVLSVVVILLI 452 (478)
Q Consensus 394 ~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~-~~~~~~~~~~~~i~~~~~~~~ 452 (478)
+.+++.-+.+.|+...+.-++..++|.+.+.+.+..+. ...+...+++.+++.++.++.
T Consensus 416 ~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~ 475 (509)
T KOG2504|consen 416 LVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLIL 475 (509)
T ss_pred HcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHh
Confidence 99999999999999999999999999999977776653 345556666666665554444
No 87
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.70 E-value=1e-15 Score=160.78 Aligned_cols=157 Identities=16% Similarity=0.201 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHH
Q 011756 30 AYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLS 92 (478)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~ 92 (478)
+.+.+..+....+....+.+.|+++++|++++.+.|++.|.+.+|..+ +..+.+++++++++.
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~ 115 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLL 115 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHH
Confidence 444567788888889999999999999999999999999998887655 333556667777666
Q ss_pred hhhc---------------------------------------------------hHHHHHHHHHHhhcccCchh-hHHH
Q 011756 93 AFSP---------------------------------------------------NYISLLILRGLAGAGLGSGH-VFFS 120 (478)
Q Consensus 93 ~~a~---------------------------------------------------~~~~l~~~R~l~Gig~g~~~-~~~~ 120 (478)
++.. .+..++++|+++|+|.+... ...+
T Consensus 116 alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~ 195 (633)
T TIGR00805 116 SLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGIS 195 (633)
T ss_pred hChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCch
Confidence 5542 25678899999999998864 5678
Q ss_pred HHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCc----------------------chHHHHHHhhHHHHHHHH
Q 011756 121 WFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPIL----------------------TWRWLLALSAIPAFVLLI 178 (478)
Q Consensus 121 ~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~----------------------~WR~~f~i~~i~~~l~~~ 178 (478)
|+.|++|+++|++..+++.....+|..++++++..+...+ +||..|.+.++.+++..+
T Consensus 196 ~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v 275 (633)
T TIGR00805 196 YIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSI 275 (633)
T ss_pred hhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999887765321 378888888887777666
Q ss_pred HHHhcCCC
Q 011756 179 FIVFMPES 186 (478)
Q Consensus 179 ~~~~lpES 186 (478)
..+++||.
T Consensus 276 ~l~~~p~~ 283 (633)
T TIGR00805 276 PFFFFPKA 283 (633)
T ss_pred HHHhCccc
Confidence 66677765
No 88
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.69 E-value=2e-13 Score=136.62 Aligned_cols=339 Identities=13% Similarity=0.098 Sum_probs=175.7
Q ss_pred HHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHH---HHhhh-----chHHHHHHH
Q 011756 50 GPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGL---LSAFS-----PNYISLLIL 104 (478)
Q Consensus 50 ~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~---~~~~a-----~~~~~l~~~ 104 (478)
.+.+.+++|+++.+.|++.+...++..+ ++.+.....++.. ...++ +.+..+.+.
T Consensus 26 ~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (396)
T TIGR00882 26 PIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVG 105 (396)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3345677899999999999988765444 2222222222111 11111 223456777
Q ss_pred HHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHHHHHHh-
Q 011756 105 RGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVF- 182 (478)
Q Consensus 105 R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~l~~~~~~~- 182 (478)
|++.|++.+.. +....+..|..+ ++++..+......++|..+++.++..+. ..+||.+|++.++..++..+..+.
T Consensus 106 ~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~-~~~~~~~f~~~~~~~~~~~~~~~~~ 182 (396)
T TIGR00882 106 GLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILF-SIDPQIVFWLGSGFALILMLLLMFA 182 (396)
T ss_pred HHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhh-ccCchHHHHHHHHHHHHHHHHHHHh
Confidence 88888887764 334455555433 3344555555666788888888877654 469999999988777665444443
Q ss_pred cCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccccccccchhhcccC
Q 011756 183 MPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS 262 (478)
Q Consensus 183 lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 262 (478)
.||+|+. ++.++ +. +. +.++. +.++..++++
T Consensus 183 ~~~~~~~-------~~~~~-----------~~-------------~~---~~~~~---------------~~~~~~~~l~ 213 (396)
T TIGR00882 183 KPKAPSS-------ATVAN-----------AL-------------GA---NASAF---------------SLKLALELFR 213 (396)
T ss_pred CCCCchh-------hhhhc-----------cc-------------cc---ccCCC---------------CHHHHHHHHc
Confidence 4554431 00000 00 00 00000 0012223333
Q ss_pred -cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhc
Q 011756 263 -PRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVG 341 (478)
Q Consensus 263 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~G 341 (478)
|+.+.... ..+.....+.....+.+.+..... ..........-....+..+...++....+++.||+|
T Consensus 214 ~~~~~~~~l----~~~~~~~~~~~~~~~~~~y~~~~~-------~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g 282 (396)
T TIGR00882 214 QRKFWMFVL----YVVGVACVYDVFDQQFANFFTSFF-------ATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIG 282 (396)
T ss_pred CCcHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhc-------cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 32222111 111111111111111111110000 000000011111223344556777888999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHH-HHHHHhHhHhHHHH
Q 011756 342 RKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGV-AYAVGRIGGMVCPL 420 (478)
Q Consensus 342 Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~-~~~~~~lg~~~~p~ 420 (478)
||+.+..+..+.++.........+.+......................+..|..|++.|+++.+. .+....+|+.++|.
T Consensus 283 ~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~ 362 (396)
T TIGR00882 283 AKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLST 362 (396)
T ss_pred cchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHH
Confidence 99988776655544333323222332222222221111111122344567788999999998877 46678899999999
Q ss_pred HHHHHhhccchhHHHHHHHHHHHHHHHHHHh
Q 011756 421 VAVGLVTSCHQTAAILLLEALIVLSVVVILL 451 (478)
Q Consensus 421 ~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 451 (478)
+.+.+.+..+....+.+.+++.++..++..+
T Consensus 363 l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 363 LAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred hHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 9999888766667777777776666655443
No 89
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.68 E-value=3.4e-13 Score=137.55 Aligned_cols=375 Identities=17% Similarity=0.150 Sum_probs=196.3
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHh
Q 011756 31 YSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSA 93 (478)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~ 93 (478)
.+++.+....+-....+-+.+.+..|.|-+ ++.+|+.+...++... ++++.++..++++.++
T Consensus 48 ~~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~a 126 (599)
T PF06609_consen 48 AFSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCA 126 (599)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhh
Confidence 344555545555555556678888898854 5666766665554333 6778888899999999
Q ss_pred hhchHHHHHHHHHHhhcccCchhhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHH
Q 011756 94 FSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPA 173 (478)
Q Consensus 94 ~a~~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~ 173 (478)
.++|...++++-.+.|+|.|........++|..|.|+|+...++...........++.++..+..+.+|||.|++.++..
T Consensus 127 tA~~~~~~iag~~l~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~ 206 (599)
T PF06609_consen 127 TAQNMNTFIAGMVLYGVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWS 206 (599)
T ss_pred cCCcHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHH
Confidence 99999999999999999987765444457999999999988777666655555566777766666779999999988765
Q ss_pred HHHHHHHHhcCCCchhhhhcCChh---HHHHHHHHHHHHcC----------CCCCCCCCCCCCCCCcccccCCCCccccc
Q 011756 174 FVLLIFIVFMPESPRYLCTKGRIT---DAHNILDKIAQFNQ----------TSLPSGNLTSDGTNDLDEEFSTSEETPLL 240 (478)
Q Consensus 174 ~l~~~~~~~lpESP~~l~~~~~~~---~a~~~l~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (478)
.+.++...+.-..|++-..+++.. |..+.++.+...-- -...-. ..+.+.+.+ .-....
T Consensus 207 ~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~--~~~~W~Sa~------VIa~lv 278 (599)
T PF06609_consen 207 GIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGY--PYYPWKSAH------VIAPLV 278 (599)
T ss_pred HHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCC--CCCCCCCcc------chhhHH
Confidence 554433322223344433333322 22222222211000 000000 000000000 000000
Q ss_pred c------cc-ccccc-ccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccc
Q 011756 241 S------SA-RKRTT-VRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQD 312 (478)
Q Consensus 241 ~------~~-~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 312 (478)
. .. ..+.. ..+++..+.+.+.++ |......+..+...+.||+...+-|....+.. .+... ....
T Consensus 279 iG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~---r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf--~~d~~---~~~~ 350 (599)
T PF06609_consen 279 IGFVLLVAFVVWEWFGAPKDPLFPHRLFKDR---RGFAALLVISFISGMNFFSVNILWPQQVVNVF--GSDPI---SITE 350 (599)
T ss_pred HHHHHHHHHHHhhhhccCCCCcCCHHHhccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--cCCCc---ccce
Confidence 0 00 00000 112233333222222 22222233334455556665443333221100 00000 0000
Q ss_pred hhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHH-HHHHHHHHHHHHHHh--hchhHHHHHHHHHHHHHhhhhhhhhhh
Q 011756 313 ASVYINVFITSFAELPGLLTAALLVDRVGRKLSMT-IMFIFVCIFLLPLVT--LQSNILLTALLSGARMFSMGTFIIANI 389 (478)
Q Consensus 313 ~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~ 389 (478)
.. ......+++...|.++.+.+..+++|-|..+ .+.....+++-.+.. .++......+.++..+...+...+...
T Consensus 351 ~~--~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~ 428 (599)
T PF06609_consen 351 IG--WISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIV 428 (599)
T ss_pred ee--hhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHH
Confidence 11 1112334455667777888888888766543 443333322222222 122222222333333322233334556
Q ss_pred hcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHH
Q 011756 390 FAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVG 424 (478)
Q Consensus 390 ~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~ 424 (478)
...-..|.+.-+++.|+..++..+|+.++..+...
T Consensus 429 ~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~ 463 (599)
T PF06609_consen 429 IAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNA 463 (599)
T ss_pred eeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 66667899999999999999999988888665543
No 90
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.66 E-value=1.4e-12 Score=130.11 Aligned_cols=347 Identities=12% Similarity=0.001 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHH--HHHHHHHHH------------------H-HHHHHHHHH-
Q 011756 30 AYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLIT--TVVFAGMMS------------------I-LGGALVTFV- 87 (478)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--s~~~~G~~~------------------~-~~~~~~~~i- 87 (478)
......++.++..........|..-+|.|.+.++.|.+. ++....-.. . +...+....
T Consensus 4 ~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~ 83 (390)
T TIGR02718 4 ITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSAC 83 (390)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHH
Confidence 345566788899988888888998899999999999974 222222111 1 111111111
Q ss_pred HHHHHhh--hch-HHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchH
Q 011756 88 AGLLSAF--SPN-YISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWR 163 (478)
Q Consensus 88 ~~~~~~~--a~~-~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR 163 (478)
...+..+ ..+ ...++..-++.++..... +....+..|..++++|+...+....+..+|.++++.....+.++.|||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~ 163 (390)
T TIGR02718 84 LASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQR 163 (390)
T ss_pred HHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 1111111 222 223343333333333332 334456789989999999999998888999999998887778888999
Q ss_pred HHHHHhhHHHHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccc
Q 011756 164 WLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSA 243 (478)
Q Consensus 164 ~~f~i~~i~~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (478)
..|++.++..++..+..++++|+++ ++.++. + .+
T Consensus 164 ~~f~~~a~l~~~~~~~~~~~~~~~~-----~~~~~~-----------------------------~----~~-------- 197 (390)
T TIGR02718 164 PAFLLVACVPLASLVCVLWLKDRAV-----ASPEAP-----------------------------L----AR-------- 197 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCc-----Cccccc-----------------------------h----hh--------
Confidence 9999998777665555555544321 000000 0 00
Q ss_pred cccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHH-
Q 011756 244 RKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFIT- 322 (478)
Q Consensus 244 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 322 (478)
..+++++++++..+......+.+......+++. ..+.+.+ . +.+....-......
T Consensus 198 ----------~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~l~~-~-----------G~s~~~ig~~~~~~~ 253 (390)
T TIGR02718 198 ----------RASLFRFFRRPLAWSLLALALLSAMTAVSGFGL--SKLYLVD-A-----------GWPLEWIGRLGMAGG 253 (390)
T ss_pred ----------HHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHH--hhHHHHh-c-----------CCCHHHHHHHHhHHH
Confidence 001122222222222222222221111122221 1122211 1 11111111111111
Q ss_pred HhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHH-HHHHHHhh-----chhHHHHHHHHHHHHHhhhhhhhhhhhcccccC
Q 011756 323 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCI-FLLPLVTL-----QSNILLTALLSGARMFSMGTFIIANIFAPEIYP 396 (478)
Q Consensus 323 ~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p 396 (478)
....+.|.+.++++.||+|+|+.+..+..+... ........ ..............+......+..+....+..+
T Consensus 254 ~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 333 (390)
T TIGR02718 254 AVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAG 333 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 234567788999999999999987766544322 11111111 011111111111111111222334455455555
Q ss_pred c-ChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 011756 397 T-SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSV 446 (478)
Q Consensus 397 ~-~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~ 446 (478)
. +.|++.+++.++...+|..++|.+.+.+.+..+....+...+++.+++.
T Consensus 334 ~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 334 DGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAI 384 (390)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 5 8999999999999999999999999988876655455555555555543
No 91
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.63 E-value=1.6e-12 Score=133.62 Aligned_cols=167 Identities=14% Similarity=0.006 Sum_probs=109.7
Q ss_pred cccccccccHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHH-HhHHhhhhhcCCCcchhhHHHHHHHHH-------
Q 011756 3 LAIQRLVYTLDEALTFMGFGKFQGLALAYSGLGWFSEAMEVMILS-FVGPAVKSEWGLSSSEESLITTVVFAG------- 74 (478)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~s~~~~G------- 74 (478)
-|-|+++..+|-.+.+ ++..... +.+..+++.+-...+. +..+.+++++|+++++.+++.+.+...
T Consensus 3 ~~~~~~~~~~~~~~~~---~p~~~~~---~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~ 76 (500)
T PRK09584 3 TANQKPTESVSLNAFK---QPKAFYL---IFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAI 76 (500)
T ss_pred CCCCCCCCCCChhhhc---CCchHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777766655542 2222222 2222233333333233 344456788999988877776654321
Q ss_pred --HHH---------HHHHHHHHHHHHHHHhhhc-hHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCC--chhHHHHHH
Q 011756 75 --MMS---------ILGGALVTFVAGLLSAFSP-NYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSN--RGKWMVVFS 139 (478)
Q Consensus 75 --~~~---------~~~~~~~~~i~~~~~~~a~-~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~--Rg~~~~~~~ 139 (478)
... +..+.++..++..+.++++ +...++++|+++|+|.|.. +...+++.|++|+++ |+...+++.
T Consensus 77 ~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~ 156 (500)
T PRK09584 77 GGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYY 156 (500)
T ss_pred HHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHH
Confidence 111 4445556666667777764 5667788999999998875 344567899998754 445778888
Q ss_pred HHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHHH
Q 011756 140 TFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFV 175 (478)
Q Consensus 140 ~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~l 175 (478)
.+.++|..+++.++..+.++.|||+.|.+.++..++
T Consensus 157 ~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i 192 (500)
T PRK09584 157 MSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLI 192 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence 999999999999999988889999999988754433
No 92
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.62 E-value=2.5e-12 Score=131.45 Aligned_cols=143 Identities=15% Similarity=0.081 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHHHHHHH-HHhHHhhhhhcCCCcchhhHHHHHHHHH-HHH-----------------HHHHHHHHHHHH
Q 011756 29 LAYSGLGWFSEAMEVMIL-SFVGPAVKSEWGLSSSEESLITTVVFAG-MMS-----------------ILGGALVTFVAG 89 (478)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~s~~~~G-~~~-----------------~~~~~~~~~i~~ 89 (478)
+..+.+..+.+.+....+ ++....+++++|+++.+.+++.+.+... +.. ++.+.+++.+++
T Consensus 16 ~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~ 95 (489)
T PRK10207 16 FFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGY 95 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHH
Confidence 333333334444443333 3444556788999999988887776421 111 567777888888
Q ss_pred HHHhhhchHHH-HHHHHHHhhcccCch-hhHHHHHhhccCCC--CchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHH
Q 011756 90 LLSAFSPNYIS-LLILRGLAGAGLGSG-HVFFSWFMEFVPPS--NRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWL 165 (478)
Q Consensus 90 ~~~~~a~~~~~-l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~--~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~ 165 (478)
+.++++++... ++++|.++|+|.|.. +...+.+.|.+|++ +|++..+++..+.++|..+++.++..+.++.|||+.
T Consensus 96 ~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~ 175 (489)
T PRK10207 96 FMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVT 175 (489)
T ss_pred HHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHH
Confidence 88888877554 558999999999876 45567889999987 457788999999999999999999998888999999
Q ss_pred HHHhhH
Q 011756 166 LALSAI 171 (478)
Q Consensus 166 f~i~~i 171 (478)
|++.++
T Consensus 176 F~i~~i 181 (489)
T PRK10207 176 YNLCGA 181 (489)
T ss_pred HHHHHH
Confidence 998654
No 93
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.62 E-value=1e-11 Score=126.86 Aligned_cols=143 Identities=15% Similarity=0.064 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHHHHHhHHh-hhhh--cCCCcchhhHHHHHHHHHHHH------------------HHHHHHHHHHHHHHH
Q 011756 34 LGWFSEAMEVMILSFVGPA-VKSE--WGLSSSEESLITTVVFAGMMS------------------ILGGALVTFVAGLLS 92 (478)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~-~~~~--~~l~~~~~~~~~s~~~~G~~~------------------~~~~~~~~~i~~~~~ 92 (478)
+..+.+.+-...+....|. ++++ +|+++.+.+++.+.+.++..+ +..+.++..++.++.
T Consensus 17 ~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~ 96 (475)
T TIGR00924 17 FVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFML 96 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHH
Confidence 4445555554444444444 4555 899999999998887654333 455666667777777
Q ss_pred hhhchHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCC---chhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHH
Q 011756 93 AFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSN---RGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLAL 168 (478)
Q Consensus 93 ~~a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~---Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i 168 (478)
++++++..++++|.+.|+|.|.. +...++++|++|+++ |++..+++..+.++|..+++.++..+.++.|||+.|.+
T Consensus 97 ~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~ 176 (475)
T TIGR00924 97 AMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNL 176 (475)
T ss_pred HhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHH
Confidence 88888999999999999998875 455677889998765 88899999999999999999999988888899999988
Q ss_pred hhHHHHHH
Q 011756 169 SAIPAFVL 176 (478)
Q Consensus 169 ~~i~~~l~ 176 (478)
.++..++.
T Consensus 177 ~~~~~~~~ 184 (475)
T TIGR00924 177 AAVGMVIG 184 (475)
T ss_pred HHHHHHHH
Confidence 77544433
No 94
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.60 E-value=6.9e-12 Score=119.30 Aligned_cols=329 Identities=16% Similarity=0.186 Sum_probs=200.3
Q ss_pred HHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHH---hhh
Q 011756 36 WFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLS---AFS 95 (478)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~---~~a 95 (478)
.+.-++.........|.+++-|+++..|.+++...++.|+.+ ++.+..++.+++.+- +..
T Consensus 22 Ffl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~ 101 (422)
T COG0738 22 FFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASS 101 (422)
T ss_pred HHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 344455555666788999999999999999999999988766 566777777777655 355
Q ss_pred chHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcC---------------
Q 011756 96 PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPI--------------- 159 (478)
Q Consensus 96 ~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~--------------- 159 (478)
.+|..++++-|+.|.|.|.. ..+-+|++-..|++.-.+.+...+..+++|.+++|+++..+..+
T Consensus 102 ~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~ 181 (422)
T COG0738 102 KSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIK 181 (422)
T ss_pred hhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHH
Confidence 68999999999999999974 45567888888888888889999999999999999998765431
Q ss_pred ----cchHHHHHHhhHHHHHHHHHHHh--cCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCC
Q 011756 160 ----LTWRWLLALSAIPAFVLLIFIVF--MPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFST 233 (478)
Q Consensus 160 ----~~WR~~f~i~~i~~~l~~~~~~~--lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (478)
..||++|...+...+++.+.... +||-+. +.. ++.
T Consensus 182 ~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~---------------------------------~~~---~~~--- 222 (422)
T COG0738 182 GADASSVQFPYLILAGLLVLLAVLILLSKLPDLQV---------------------------------AAP---SLG--- 222 (422)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCc---------------------------------ccc---ccc---
Confidence 14777777666555544443322 222110 000 000
Q ss_pred CCcccccccccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccch
Q 011756 234 SEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDA 313 (478)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 313 (478)
+ . + .. ...++++.+..+.-.+..+++.+.....+. |.+.+..+. .+.++.
T Consensus 223 -~---------~-----~-~~-~~~~l~~~~~~~~gvl~~FlYVG~Eva~gs---fl~~y~~~~----------~g~~~~ 272 (422)
T COG0738 223 -A---------S-----G-SA-GLSSLFQNKHLRLGVLAIFLYVGAEVAIGS---FLVSYLEEL----------LGLNEQ 272 (422)
T ss_pred -c---------c-----c-cc-hHHHHHhChHHHHHHHHHHHHHhHHHHHHH---HHHHHHHhc----------CCccHH
Confidence 0 0 0 00 122333333333333333334433222221 111111110 011111
Q ss_pred hhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhccc
Q 011756 314 SVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPE 393 (478)
Q Consensus 314 ~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E 393 (478)
..-........+..+|...+.++..|+...+.+....++..+.++......+..... ......++....++..+....+
T Consensus 273 ~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~~~-~l~~ig~F~simfPTIfslal~ 351 (422)
T COG0738 273 QAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVALY-ALFLIGLFNSIMFPTIFSLALK 351 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHHHH-HHHHHHHHhHHHHHHHHHHHHh
Confidence 111123344456788888888898999888887766655554444444444433222 2333344556678888999999
Q ss_pred ccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHH
Q 011756 394 IYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAIL 436 (478)
Q Consensus 394 ~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~ 436 (478)
..| ++-..+.++ -.++-+||.+.|.+.+.+.+..+....+.
T Consensus 352 ~l~-~~ts~~s~~-l~maivGGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 352 NLG-EHTSVGSGL-LVMAIVGGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred ccC-cccccccee-eeeheecchHHHHHHHHHHHhhhhHHHHH
Confidence 999 444444443 34556889999999998877655433343
No 95
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.58 E-value=6e-13 Score=135.55 Aligned_cols=351 Identities=12% Similarity=0.042 Sum_probs=186.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH---------------------HHHHHHHHH
Q 011756 28 ALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS---------------------ILGGALVTF 86 (478)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~---------------------~~~~~~~~~ 86 (478)
.+..+...++..|.-........|.+++++|++.++.+...++..+...+ ++.+.++..
T Consensus 27 ~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~ 106 (468)
T TIGR00788 27 VLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPFAGVMSDTFPLFGYTKRWYLVLSGLLGS 106 (468)
T ss_pred HHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHH
Confidence 34455556778888744444556778888999999998888887655444 233333331
Q ss_pred -HHHHHHhhhchHHHHH-HHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHH---HHHHHHHHHHHHHHHhcCc
Q 011756 87 -VAGLLSAFSPNYISLL-ILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTF---WTFGSVSEAALAWIVMPIL 160 (478)
Q Consensus 87 -i~~~~~~~a~~~~~l~-~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~---~~~G~~~~~~~~~~~~~~~ 160 (478)
+.....+..++..... +.+++.+++.+.. .+.-.++.|..+ ++++...+..... ..+|.++++.+++.+.+..
T Consensus 107 ~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~ 185 (468)
T TIGR00788 107 AILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKT 185 (468)
T ss_pred HHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2212223335544444 4888888887765 455678899998 5554433333333 3479999999888888888
Q ss_pred chHHHHHHhhHHHHHHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCccccc
Q 011756 161 TWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLL 240 (478)
Q Consensus 161 ~WR~~f~i~~i~~~l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (478)
+||..|++.+...++..+...++||++.....+.+.++ . ....... ....
T Consensus 186 ~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~-~-------------------------~~~~~~~----~~~~ 235 (468)
T TIGR00788 186 LTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYL-E-------------------------MNMALLT----LGVL 235 (468)
T ss_pred CcchHHHHHHHHHHHHHHHHHhcccccccccccccccc-h-------------------------hhhhhhh----hhHH
Confidence 99999999887666666666778886421000000000 0 0000000 0000
Q ss_pred ccccccccccccccchhhcccC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHH
Q 011756 241 SSARKRTTVRKSGFSSFLMLFS-PRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINV 319 (478)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (478)
+ ..++..++....++ |..++......+. |. ..+......... .. ...+.+........
T Consensus 236 ~-------~~~~~~~~l~~~l~~~~i~~~l~fifl~-------~~----~~~~~~~~~f~~-~~--~~lG~s~~~~G~~~ 294 (468)
T TIGR00788 236 A-------NVKVQILGLRGAIQLLEIAKPLIFIFLS-------YA----NLPGASGSVFCA-TT--QCLPGGPSFSGMSK 294 (468)
T ss_pred H-------HHHHHHHHHHHHHhcHHHHHHHHHHHHH-------Hh----hcCCCCceeEEE-Ec--ccCCCCcchhhhHH
Confidence 0 00000111211222 2222111111110 00 000000000000 00 00111112222223
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh----h------chhHHHHHHHHHHHHHhhhhhhhhhh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT----L------QSNILLTALLSGARMFSMGTFIIANI 389 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~----~------~~~~~~~~~~~~~~~~~~g~~~~~~~ 389 (478)
...+++.++|..+.+...+|++.|+++..+..+..+..+.... . .+............+.....+.....
T Consensus 295 ~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~ 374 (468)
T TIGR00788 295 VVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLV 374 (468)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHH
Confidence 3455778888888888889999999888877655543322110 0 01111111111111111122334578
Q ss_pred hcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccc
Q 011756 390 FAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH 430 (478)
Q Consensus 390 ~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~ 430 (478)
+..+..|.+.+++.+++.+++.++|..+++.+.+.+.+..+
T Consensus 375 ~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 375 LLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 88899999999999999999999999999987776655544
No 96
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.57 E-value=3.2e-11 Score=123.40 Aligned_cols=291 Identities=15% Similarity=0.066 Sum_probs=171.9
Q ss_pred chHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHH
Q 011756 96 PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAF 174 (478)
Q Consensus 96 ~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~ 174 (478)
.+.+.+++.-++.|++.+.. +.-.+.+-|..|+++...+++..+...++..++||.+++.+....|=.+.|.+.++.-+
T Consensus 101 ~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl 180 (524)
T PF05977_consen 101 LSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFL 180 (524)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46888999999999887765 44567789999999999999999999999999999999988777888888888876544
Q ss_pred HHHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCccccccccccccccccccc
Q 011756 175 VLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGF 254 (478)
Q Consensus 175 l~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (478)
+........+..++ +.+ .+.++..+. . .
T Consensus 181 ~~i~~l~~~~~~~~----~~~-~~~e~~~~~---------------------------------l--------------~ 208 (524)
T PF05977_consen 181 ISILALLRWKPPPP----PSS-LPRERFFSA---------------------------------L--------------R 208 (524)
T ss_pred HHHHHHHHcccccc----ccc-cchhhhhhh---------------------------------H--------------H
Confidence 44333333322110 000 000000000 0 0
Q ss_pred chhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHH
Q 011756 255 SSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAA 334 (478)
Q Consensus 255 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 334 (478)
..++..++.+..+..++....+......++ ...|.+.... .+......-......+++++.|.++.+
T Consensus 209 ~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~---aLlPl~a~~~----------l~~~a~~yGll~a~~gvGai~Gal~~~ 275 (524)
T PF05977_consen 209 EGLRYVRSSPPLRSVLLRSFLFNLFASAVW---ALLPLFARDV----------LGGGASGYGLLLAAFGVGAILGALLLP 275 (524)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHhhhHHH---HhhhHHHHHH----------hCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012222222333333222221111111112 1223222100 011111111223455677788888888
Q ss_pred HHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhHh
Q 011756 335 LLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIG 414 (478)
Q Consensus 335 ~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg 414 (478)
.+.+|+++++++..+.+..++..+.+....+.+.....++..++..............+..|.++||+..++...+...+
T Consensus 276 ~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~ 355 (524)
T PF05977_consen 276 RLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGG 355 (524)
T ss_pred HhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHH
Confidence 88888888887777666666555555554444443333444333333444556778889999999999999999888888
Q ss_pred HhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHh
Q 011756 415 GMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILL 451 (478)
Q Consensus 415 ~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 451 (478)
..++..+.+.+.+..+....+.+.++..+++.++.+.
T Consensus 356 ~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~ 392 (524)
T PF05977_consen 356 MPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALR 392 (524)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888887777666555555544444455444443
No 97
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.55 E-value=7.3e-12 Score=120.53 Aligned_cols=274 Identities=12% Similarity=0.073 Sum_probs=156.6
Q ss_pred hhchHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhc--------------
Q 011756 94 FSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP-------------- 158 (478)
Q Consensus 94 ~a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~-------------- 158 (478)
...+|..+++.-|+.|.|.+.. .....|+++..|++++.+.+++.+..+.+|.+++|.++..+..
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 4678999999999999999875 5667899999999999999999999999999999999886552
Q ss_pred --CcchHHHHHHhhHHHHHHHHHHHh--cCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCC
Q 011756 159 --ILTWRWLLALSAIPAFVLLIFIVF--MPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTS 234 (478)
Q Consensus 159 --~~~WR~~f~i~~i~~~l~~~~~~~--lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (478)
..+||++|++.+....+..+...+ +||..+ ++++ +..+. +..
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~------~~~~---------------------------~~~~~-~~~ 131 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE------ADVA---------------------------RVSSG-DTT 131 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc------cccc---------------------------ccccc-ccc
Confidence 147999998665544444333333 455311 0000 00000 000
Q ss_pred CcccccccccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchh
Q 011756 235 EETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDAS 314 (478)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 314 (478)
+ + .+.+.++. ..+..+..+.....--+...|.+.+...... .+.+...
T Consensus 132 ~---------------~-----~~~~~~~~----~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~--------~g~s~~~ 179 (310)
T TIGR01272 132 Q---------------K-----TSAFQFTH----LVLGALGIFVYVGAEVSAGSFLVNFLSDPHA--------LGLPEDQ 179 (310)
T ss_pred c---------------h-----hhHHhhHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--------CCCCHHH
Confidence 0 0 00011111 1111111111111111222233322211000 0111111
Q ss_pred hHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 011756 315 VYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEI 394 (478)
Q Consensus 315 ~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~ 394 (478)
.-........+..+|.++++++.||+|+|+.+..+..++++..+............ ......++....++.......+.
T Consensus 180 a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~~-~~~l~g~~~s~i~P~~~s~a~~~ 258 (310)
T TIGR01272 180 AAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAMW-FVLALGLFNSIMFPTIFSLALNA 258 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhh
Confidence 11123344456788999999999999999887766555544433222222221111 22223344445667777788888
Q ss_pred cCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHH
Q 011756 395 YPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAIL 436 (478)
Q Consensus 395 ~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~ 436 (478)
+|.+ .+++.++. .++.+|+.+.|.+.+.+.+..+...+++
T Consensus 259 ~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~ 298 (310)
T TIGR01272 259 LGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFA 298 (310)
T ss_pred hhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHH
Confidence 8754 45666764 6788999999999888877665444554
No 98
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.53 E-value=2.8e-11 Score=113.53 Aligned_cols=332 Identities=20% Similarity=0.181 Sum_probs=200.1
Q ss_pred HHHHHhHHhhhhhcCCCcchhhHHHHHHHHHH--HH---------------HHHHHHHHHHHHHHHhhhchHHHHHHHHH
Q 011756 44 MILSFVGPAVKSEWGLSSSEESLITTVVFAGM--MS---------------ILGGALVTFVAGLLSAFSPNYISLLILRG 106 (478)
Q Consensus 44 ~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~--~~---------------~~~~~~~~~i~~~~~~~a~~~~~l~~~R~ 106 (478)
..++..++.+++|+|+|.+..|++.++-.+-. .. +..+.++..++.++-... +...++.+-.
T Consensus 29 tsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~ 107 (395)
T COG2807 29 TSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTL 107 (395)
T ss_pred hhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHH
Confidence 44556678899999999999999999875432 22 334444445555544433 6778899999
Q ss_pred HhhcccCchhh-HHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCc-chHHHHHHhhHHHHHHHHHHHhcC
Q 011756 107 LAGAGLGSGHV-FFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPIL-TWRWLLALSAIPAFVLLIFIVFMP 184 (478)
Q Consensus 107 l~Gig~g~~~~-~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~-~WR~~f~i~~i~~~l~~~~~~~lp 184 (478)
+.|.|++...+ ..+++-|.+|+ +-|.+++.|....+.|..+++.++..+..+. +||....+-++|+++.++.++ |
T Consensus 108 l~G~gIav~nVLLPslIK~~Fpk-~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~Wl--P 184 (395)
T COG2807 108 LAGAGIAVINVLLPSLIKRDFPK-RVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWL--P 184 (395)
T ss_pred HHHhhHHHHHHhhhHHHHhhccc-chhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHh--h
Confidence 99999887654 45678888865 5789999999999999999988887776665 799999999999987766543 4
Q ss_pred CCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCcccccccccccccccccccchhhcccCcc
Q 011756 185 ESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPR 264 (478)
Q Consensus 185 ESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 264 (478)
...|.. + + +. ..+ . .+...+++.+
T Consensus 185 q~~r~~----~--~-----------------------------~~----~~~----------~-------~~~~~vw~~~ 208 (395)
T COG2807 185 QALREQ----A--A-----------------------------SI----ATK----------L-------VSVRKVWRSP 208 (395)
T ss_pred hccccc----c--c-----------------------------cc----ccc----------c-------ccccccccCc
Confidence 332210 0 0 00 000 0 0001112111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhc-hH
Q 011756 265 FFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVG-RK 343 (478)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~G-Rr 343 (478)
..+.+.+.+..++..||...-|.|.+....+ .+....-....+..+..++..+....+.+|.. +|
T Consensus 209 ---~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G-----------~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r 274 (395)
T COG2807 209 ---LAWQVTLFMGLQSLLYYIVIGWLPAILIDRG-----------LSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQR 274 (395)
T ss_pred ---hhHHHHHHHHhhHHHHHHHHHHHHHHHHHcC-----------CCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 1222333444578889999999988764322 11111122334556778899999999999764 44
Q ss_pred HHHHHHHHHHHH--HHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhccccc-CcChhHHHHHHHHHHHhHhHhHHHH
Q 011756 344 LSMTIMFIFVCI--FLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIY-PTSMRSTGAGVAYAVGRIGGMVCPL 420 (478)
Q Consensus 344 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~-p~~~R~~~~g~~~~~~~lg~~~~p~ 420 (478)
+........+.+ +.+.+.-.+..+... ........+.++..-.....-. ..+..+.-.|++..+|++-+..+|.
T Consensus 275 ~~~~~~~~~~l~G~~G~~~~P~~~~~lw~---~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~ 351 (395)
T COG2807 275 PLVVLALLLMLVGLVGLLLAPGQLPILWA---LLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPW 351 (395)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhHHHHHH---HHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhh
Confidence 433322222211 111111111112221 1111112234444444444433 4466678889999999999999999
Q ss_pred HHHHHhhccchh-HHHHHHHHHHHHHHHHHHhc
Q 011756 421 VAVGLVTSCHQT-AAILLLEALIVLSVVVILLI 452 (478)
Q Consensus 421 ~~~~l~~~~~~~-~~~~~~~~~~~i~~~~~~~~ 452 (478)
+++.+.+..+.. .....+..+.+...+..+..
T Consensus 352 l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a 384 (395)
T COG2807 352 LFGFLHDATGSWSAPLVLLALATLLMLIFGLRA 384 (395)
T ss_pred hHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhc
Confidence 999998876643 34444455444444444443
No 99
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.50 E-value=2.2e-10 Score=115.94 Aligned_cols=146 Identities=20% Similarity=0.236 Sum_probs=98.4
Q ss_pred hhHHHHHHHHhhhhhHHHHHHHHHhhhchH--HHHHHHHHHHHH-HHHHHH-h------hchhHHHHHHHHHHHHHhhhh
Q 011756 314 SVYINVFITSFAELPGLLTAALLVDRVGRK--LSMTIMFIFVCI-FLLPLV-T------LQSNILLTALLSGARMFSMGT 383 (478)
Q Consensus 314 ~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr--~~~~~~~~~~~~-~~~~~~-~------~~~~~~~~~~~~~~~~~~~g~ 383 (478)
......++..+.+++|+++.+++.||+|-| +++..+.....+ .+..+. . .++.+...++......+..+.
T Consensus 318 ~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~ 397 (477)
T PF11700_consen 318 QLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGI 397 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhH
Confidence 344455677788999999999999999998 666554433322 121111 0 222333222322333333345
Q ss_pred hhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHHHhccccccCcc
Q 011756 384 FIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQ-TAAILLLEALIVLSVVVILLIPFETKGKE 460 (478)
Q Consensus 384 ~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~-~~~~~~~~~~~~i~~~~~~~~~pet~g~~ 460 (478)
++..-++.+|+.|++..+.-+|+-...++..++++|.+++.+.+..+. ..++....++.+++.++ ++..++.||+.
T Consensus 398 qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~l-l~~v~~~~g~~ 474 (477)
T PF11700_consen 398 QSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLIL-LFFVDVEKGRE 474 (477)
T ss_pred HHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH-Hhhccchhhhh
Confidence 666788999999999999999999999999999999999988777653 34555556665666544 45566777764
No 100
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.48 E-value=3.4e-12 Score=131.25 Aligned_cols=158 Identities=18% Similarity=0.087 Sum_probs=107.3
Q ss_pred hHHh-hhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHH---HHHhhhchHHHHHHHHHH
Q 011756 49 VGPA-VKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAG---LLSAFSPNYISLLILRGL 107 (478)
Q Consensus 49 ~~~~-~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~---~~~~~a~~~~~l~~~R~l 107 (478)
..|. +++++|.+..+.++..+...+|..+ +..+.+...+++ +....+++...++++|++
T Consensus 272 ~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (490)
T PRK10642 272 YMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLM 351 (490)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 3444 5567788877766665555544332 222222222211 112234567888899999
Q ss_pred hhcccCch-hhHHHHHhhccCCCCchhHHHH-HHHHHHHHHHHHHHHHHHHhcC-cchHHHHHHhhHHHHHHHHHHHhcC
Q 011756 108 AGAGLGSG-HVFFSWFMEFVPPSNRGKWMVV-FSTFWTFGSVSEAALAWIVMPI-LTWRWLLALSAIPAFVLLIFIVFMP 184 (478)
Q Consensus 108 ~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~-~~~~~~~G~~~~~~~~~~~~~~-~~WR~~f~i~~i~~~l~~~~~~~lp 184 (478)
.|++.+.. .....++.|.+|++.||+..++ ++.+...| .++|.+...+.+. .+|+.++++..+++++.++..+++|
T Consensus 352 ~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g-~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~p 430 (490)
T PRK10642 352 LAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVA-GLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMK 430 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 99876654 2445567899999999998886 56655444 5566665555443 4688888888888887777777889
Q ss_pred CCchhhhhc-----CChhHHHHHHHHHH
Q 011756 185 ESPRYLCTK-----GRITDAHNILDKIA 207 (478)
Q Consensus 185 ESP~~l~~~-----~~~~~a~~~l~~~~ 207 (478)
|||+|+.+| ||.|||+++++|++
T Consensus 431 es~~~~~~~~~~~~~~~~~a~~~l~~~~ 458 (490)
T PRK10642 431 ETANRPLKGATPAASDIQEAKEILVEHY 458 (490)
T ss_pred cccCCCCCCccccccchhhHHHHhhccc
Confidence 999999865 99999999999886
No 101
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.47 E-value=3.8e-11 Score=112.95 Aligned_cols=129 Identities=19% Similarity=0.166 Sum_probs=96.1
Q ss_pred CcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCchhhHHHHH
Q 011756 60 SSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWF 122 (478)
Q Consensus 60 ~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~~~~~~~~ 122 (478)
+....|.+.|++.++..+ +..+++..++.-.+-++++|+..+++.|++.|+.-|...+..+++
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~rAii 145 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVIRAII 145 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHHH
Confidence 445678889988776555 455555556666778899999777778999999999887888899
Q ss_pred hhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhc-C-cchHHHHHH----hhHHHHH-HHHHHHhcCCCch
Q 011756 123 MEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP-I-LTWRWLLAL----SAIPAFV-LLIFIVFMPESPR 188 (478)
Q Consensus 123 ~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~-~-~~WR~~f~i----~~i~~~l-~~~~~~~lpESP~ 188 (478)
+|+.++|+|++.++..++.+++|.++||.+++++.. . ..=+++|.. ..+.... ...+.+++||+-+
T Consensus 146 sdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~ 218 (451)
T KOG2615|consen 146 SDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLP 218 (451)
T ss_pred HhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 999999999999999999999999999999988654 1 111222333 2233333 3445678999933
No 102
>PRK09669 putative symporter YagG; Provisional
Probab=99.45 E-value=2.5e-10 Score=115.94 Aligned_cols=312 Identities=13% Similarity=0.045 Sum_probs=161.2
Q ss_pred HHhHHhhhhhcCCCcchhhHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHhhhch------H
Q 011756 47 SFVGPAVKSEWGLSSSEESLITTVVFAGMMS----------------------ILGGALVTFVAGLLSAFSPN------Y 98 (478)
Q Consensus 47 ~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~----------------------~~~~~~~~~i~~~~~~~a~~------~ 98 (478)
.+..+...+++|+++.+.|.+.+..-+--.+ ++.+.+...+...+....|+ +
T Consensus 30 ~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~ 109 (444)
T PRK09669 30 LFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKI 109 (444)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHH
Confidence 4555667788999999988888776543222 33444444444433333432 4
Q ss_pred HHHHHHHHHhhcccCch-hhHHHHHhhcc-CCCCchhHHHHHHHHHHHHHHHHHHHHHH----Hh---cCcchHHHHHHh
Q 011756 99 ISLLILRGLAGAGLGSG-HVFFSWFMEFV-PPSNRGKWMVVFSTFWTFGSVSEAALAWI----VM---PILTWRWLLALS 169 (478)
Q Consensus 99 ~~l~~~R~l~Gig~g~~-~~~~~~~~E~~-p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~----~~---~~~~WR~~f~i~ 169 (478)
..+++..++.+.+.... .+..++..|++ ++++|++..+.-.....+|..+++.+... +. +..+||..+.+.
T Consensus 110 ~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~ 189 (444)
T PRK09669 110 IYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVM 189 (444)
T ss_pred HHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence 55666666666544433 23446788988 55889998888877777777766554332 21 135799888877
Q ss_pred hHHHHHHHHH-HHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCccccccccccccc
Q 011756 170 AIPAFVLLIF-IVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTT 248 (478)
Q Consensus 170 ~i~~~l~~~~-~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (478)
++...+..+. .+..+|.++ + + + +++.+
T Consensus 190 ~ii~~v~~~~~~~~~~e~~~--------------------------~-----~-------~----~~~~~---------- 217 (444)
T PRK09669 190 GLLGVVLFFCCFFMTKERYT--------------------------P-----E-------V----DNSSS---------- 217 (444)
T ss_pred HHHHHHHHHHHhCCeEEecC--------------------------C-----C-------C----cCCCC----------
Confidence 7665554333 222333210 0 0 0 00000
Q ss_pred ccccccchhhcccCcchHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhh
Q 011756 249 VRKSGFSSFLMLFSPRFFKTTILLWVL-YFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAEL 327 (478)
Q Consensus 249 ~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (478)
..++++..++.+.++......+. ....... .+.. ..+... . ....+... .......+..+
T Consensus 218 ----~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~-~~~~---~y~~~~--------~--~~~~~~~~-~~~~~~~i~~i 278 (444)
T PRK09669 218 ----VWKDLKLLLGNSQWRIMFIFNVVLLTAVVTR-GGAT---LYYVNY--------V--LLRPDLAT-LFLVTGMIAGL 278 (444)
T ss_pred ----HHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-hhhh---heeeee--------e--cCCHHHHH-HHHHHHHHHHH
Confidence 00123333333333222222111 1111110 0110 000000 0 00111111 11123335567
Q ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh--hchhHHHHHHHHHHHHHhhhhhhhhhhhcccccC-------cC
Q 011756 328 PGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT--LQSNILLTALLSGARMFSMGTFIIANIFAPEIYP-------TS 398 (478)
Q Consensus 328 ~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p-------~~ 398 (478)
++..+.+++.||+|||+.+..+.....+....... ..+.+..........+......+..+...+|..+ .+
T Consensus 279 i~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r 358 (444)
T PRK09669 279 FGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRR 358 (444)
T ss_pred HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcC
Confidence 78888899999999999887665443322221111 1222222222222222223344567888888775 34
Q ss_pred hhHHHHHHHHHHHhHhHhHHHHHHHHHhhcc
Q 011756 399 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC 429 (478)
Q Consensus 399 ~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~ 429 (478)
..|...|..+.+.++|..++|.+.+.+++..
T Consensus 359 ~~g~~~s~~~~~~klg~alg~~i~g~ll~~~ 389 (444)
T PRK09669 359 LDGLVFSTNLFAIKLGLAIGGAVVGWILAWV 389 (444)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4577788888899999999998888776543
No 103
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.42 E-value=2.6e-09 Score=107.70 Aligned_cols=364 Identities=17% Similarity=0.115 Sum_probs=184.7
Q ss_pred HHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHhhhchHHHHH-
Q 011756 46 LSFVGPAVKSEWGLSSSEESLITTVVFAGMMS----------------------ILGGALVTFVAGLLSAFSPNYISLL- 102 (478)
Q Consensus 46 ~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~----------------------~~~~~~~~~i~~~~~~~a~~~~~l~- 102 (478)
.++..| +-+++|.+..+.+++.....+..++ ++.+.+...++..+.++++++..++
T Consensus 24 ~~~l~~-yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~ 102 (477)
T TIGR01301 24 LSLLTP-YVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFG 102 (477)
T ss_pred HHHHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhcc
Confidence 344444 4467899888888887765443222 2223444444445555666543221
Q ss_pred -----------HHHHHhhc-----ccCch-hhHHHHHhhccCCCCc--hhHHHHHHHHHHHHHHHHHHHHHHHh--cC--
Q 011756 103 -----------ILRGLAGA-----GLGSG-HVFFSWFMEFVPPSNR--GKWMVVFSTFWTFGSVSEAALAWIVM--PI-- 159 (478)
Q Consensus 103 -----------~~R~l~Gi-----g~g~~-~~~~~~~~E~~p~~~R--g~~~~~~~~~~~~G~~~~~~~~~~~~--~~-- 159 (478)
+.+++.|+ +.... .+..+++.|.+|+++| +.+.++.+....+|.++++.++.... ..
T Consensus 103 ~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~ 182 (477)
T TIGR01301 103 DNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFP 182 (477)
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcc
Confidence 13444443 33322 2345678999999866 67899999999999999998886531 11
Q ss_pred -----------cchHHHHHHhhHHHHHH-HHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCc
Q 011756 160 -----------LTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDL 227 (478)
Q Consensus 160 -----------~~WR~~f~i~~i~~~l~-~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 227 (478)
.+-|..|.+.++..++. ++..+..+|.|... . +|..+ ++.
T Consensus 183 ~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~--~---~~~~~-----------------------~~~ 234 (477)
T TIGR01301 183 FTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIG--S---DDFIN-----------------------SEA 234 (477)
T ss_pred cccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCc--c---ccchh-----------------------hhc
Confidence 15788999888766655 44456688876310 0 00000 000
Q ss_pred ccccCCCCcccccccccccccccccccchhhcccCcchHHHH-HHHHHHHHHH-HHHHHHHHHHHHhhhCCCCCcccccc
Q 011756 228 DEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTT-ILLWVLYFGN-SFVYYGIVLLASELSGSQSKCSSSIL 305 (478)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~ 305 (478)
++..+..++... ++-+++++++ |+..++. +...+.|++. .+.+|.......++...... .
T Consensus 235 ~~~~~~~~~~~~-----------~~i~~~~~~m--P~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~-~---- 296 (477)
T TIGR01301 235 APPSKHGEEAFF-----------GELFGAFKYL--PRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVN-Q---- 296 (477)
T ss_pred ccccccchhhhH-----------HHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCc-c----
Confidence 000000000000 0001111111 2222222 2222333321 11122222222222211110 0
Q ss_pred cccCccch---hhHHHHHHHHhhhhhHHHHHHHHHhhhch-HHHHHHHHHHHHHHHHHHHhhch----------------
Q 011756 306 LSENVQDA---SVYINVFITSFAELPGLLTAALLVDRVGR-KLSMTIMFIFVCIFLLPLVTLQS---------------- 365 (478)
Q Consensus 306 ~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~l~dr~GR-r~~~~~~~~~~~~~~~~~~~~~~---------------- 365 (478)
...+.+. .. ....+.++...+.+++...+.+|+|+ |+....+.++.++++....+..+
T Consensus 297 -~~~y~~gvr~G~-~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~ 374 (477)
T TIGR01301 297 -GAKYDDGVRAGA-FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLP 374 (477)
T ss_pred -hhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccC
Confidence 0011111 11 11223333334455667778899985 66767776655555444332111
Q ss_pred -----hHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChh--HHHHHHHHHHHhHhHhHHHHHHHHHhhccch--hHHHH
Q 011756 366 -----NILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR--STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQ--TAAIL 436 (478)
Q Consensus 366 -----~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R--~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~--~~~~~ 436 (478)
......+....++.....++++|.+.+|..|.+.| |.-+|+.|.+-.+..++.....+.+.+..+. ...+.
T Consensus 375 ~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~ 454 (477)
T TIGR01301 375 PPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFV 454 (477)
T ss_pred cchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHH
Confidence 01111112122222233456789999999996555 8889999998888777777666654444332 23445
Q ss_pred HHHHHHHHHHHHHHhccccccC
Q 011756 437 LLEALIVLSVVVILLIPFETKG 458 (478)
Q Consensus 437 ~~~~~~~i~~~~~~~~~pet~g 458 (478)
+-++..+++.+..++.+|.++.
T Consensus 455 ~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 455 VGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCCC
Confidence 5556677888888888887653
No 104
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.38 E-value=1.4e-08 Score=100.88 Aligned_cols=111 Identities=17% Similarity=0.208 Sum_probs=77.2
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh-chhHHHHHHHHH---HHHHhh-hhhhhhhhhcccc
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL-QSNILLTALLSG---ARMFSM-GTFIIANIFAPEI 394 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~-g~~~~~~~~~~E~ 394 (478)
.+..+.+++-....+++..|+|-|+++..+.....+=...+... ++.+........ ...... ..+.....+..|.
T Consensus 250 ~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~ 329 (400)
T PF03825_consen 250 ALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRI 329 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHh
Confidence 35557788899999999999999999888877666544444433 232222221111 112222 2344567889999
Q ss_pred cCcChhHHHHHHHHHHHh-HhHhHHHHHHHHHhhccc
Q 011756 395 YPTSMRSTGAGVAYAVGR-IGGMVCPLVAVGLVTSCH 430 (478)
Q Consensus 395 ~p~~~R~~~~g~~~~~~~-lg~~~~p~~~~~l~~~~~ 430 (478)
.|.+.|++++++.+.+.. +|+.++..+.+.+.+..+
T Consensus 330 ~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g 366 (400)
T PF03825_consen 330 APPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFG 366 (400)
T ss_pred CCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence 999999999999888764 789999999998887754
No 105
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.31 E-value=1.1e-10 Score=110.61 Aligned_cols=130 Identities=18% Similarity=0.236 Sum_probs=107.0
Q ss_pred hcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCchh-h
Q 011756 56 EWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-V 117 (478)
Q Consensus 56 ~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~~-~ 117 (478)
+.+-.+.+.|++.++..+-..+ ++.+..++...+++-++.++|+++++.|.++|+|.+... .
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~ts 179 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTS 179 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhh
Confidence 3444566788887776432222 777888888999999999999999999999999987654 4
Q ss_pred HHHHHhhccCCC-CchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHHHHHHhcCC
Q 011756 118 FFSWFMEFVPPS-NRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPE 185 (478)
Q Consensus 118 ~~~~~~E~~p~~-~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~l~~~~~~~lpE 185 (478)
..+.+++.+|++ +||+++|+.-.+..+|.+++|+.++++.+..|.+.+|.+.++..++-....+++-|
T Consensus 180 glamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 180 GLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIE 248 (464)
T ss_pred hHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeC
Confidence 567788999986 57999999999999999999999999988899999999999988887776666544
No 106
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.29 E-value=4.6e-09 Score=106.19 Aligned_cols=313 Identities=20% Similarity=0.195 Sum_probs=175.1
Q ss_pred HHhHHhhhhhcCCCcchhhHHHHHHHH-HHHH---------------------HHHHHHHHHHHHHHHhhh-c-------
Q 011756 47 SFVGPAVKSEWGLSSSEESLITTVVFA-GMMS---------------------ILGGALVTFVAGLLSAFS-P------- 96 (478)
Q Consensus 47 ~~~~~~~~~~~~l~~~~~~~~~s~~~~-G~~~---------------------~~~~~~~~~i~~~~~~~a-~------- 96 (478)
.+..+-..+..++++...|.+....-+ +.+. ++.+.+...++..+.... |
T Consensus 22 ~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~ 101 (428)
T PF13347_consen 22 SYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTA 101 (428)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhh
Confidence 355556667778888777776665422 2221 444555555554444444 3
Q ss_pred hHHHHHHHHHHhhcccCchh-hHHHHHhhccC-CCCchhHHHHHHHHHHHHHHHHHHHHHHHhc----C---cchHHHHH
Q 011756 97 NYISLLILRGLAGAGLGSGH-VFFSWFMEFVP-PSNRGKWMVVFSTFWTFGSVSEAALAWIVMP----I---LTWRWLLA 167 (478)
Q Consensus 97 ~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p-~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~----~---~~WR~~f~ 167 (478)
....+.+.-++..++..... +..++..|.++ +++|.+..+.-+.+..+|.++.+.+...+.+ . .+||+...
T Consensus 102 ~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~ 181 (428)
T PF13347_consen 102 KLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMAL 181 (428)
T ss_pred HHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHH
Confidence 23345666666666555443 34567889998 5799999999888888888765555544332 1 27999998
Q ss_pred HhhHHHHHHHH-HHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCcccccCCCCccccccccccc
Q 011756 168 LSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKR 246 (478)
Q Consensus 168 i~~i~~~l~~~-~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (478)
+.++..++..+ .....+|.++ +.++ + .++.+
T Consensus 182 v~~iv~~v~~~i~~~~~ke~~~------~~~~------------------------------~----~~~~~-------- 213 (428)
T PF13347_consen 182 VLAIVGLVFFLITFFFVKERSV------EVTE------------------------------Q----EKKIS-------- 213 (428)
T ss_pred HHHHHHHHHhhhhhheeeeccc------cccc------------------------------c----ccccc--------
Confidence 88877776644 4445666110 0000 0 00000
Q ss_pred ccccccccchhhcccCcchHHHHHHHHH-HHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhh
Q 011756 247 TTVRKSGFSSFLMLFSPRFFKTTILLWV-LYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFA 325 (478)
Q Consensus 247 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (478)
-.+.++.+++.|.++......+ .+++.....-...++.....+.. .... ....+..+.
T Consensus 214 ------~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-------------~~~~--~~~~~~~~~ 272 (428)
T PF13347_consen 214 ------LRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-------------GLIS--IFMLIFFVA 272 (428)
T ss_pred ------cccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-------------hhhH--HHHHHHHHH
Confidence 0112334444333333322222 22222211111111111111100 0011 112344566
Q ss_pred hhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhc--hhHHHHHHHHHHHHHhhhhhhhhhhhcccccCc------
Q 011756 326 ELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ--SNILLTALLSGARMFSMGTFIIANIFAPEIYPT------ 397 (478)
Q Consensus 326 ~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~------ 397 (478)
.+++..+.++++||+|||+.+..+..+.++..+.+.... +.+................+...+...+|+.+.
T Consensus 273 ~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg 352 (428)
T PF13347_consen 273 SIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTG 352 (428)
T ss_pred HHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcC
Confidence 788889999999999999998887776665544444332 333333333333333334456678888888763
Q ss_pred -ChhHHHHHHHHHHHhHhHhHHHHHHHHHhhc
Q 011756 398 -SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 428 (478)
Q Consensus 398 -~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~ 428 (478)
+..|.-.|+.+...+++..+++.+.+.+++.
T Consensus 353 ~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~ 384 (428)
T PF13347_consen 353 RRREGMYFSVNSFFIKIGQGLAGAIVGLLLAL 384 (428)
T ss_pred CCchHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 4458888999999999999998887776544
No 107
>PRK11462 putative transporter; Provisional
Probab=99.28 E-value=1.8e-08 Score=102.71 Aligned_cols=126 Identities=17% Similarity=0.138 Sum_probs=74.7
Q ss_pred hhhhcCCCcchhhHHHHHH---------HHHHHH-------------HHHHHHHHHHHHHHHhhhch------HHHHHHH
Q 011756 53 VKSEWGLSSSEESLITTVV---------FAGMMS-------------ILGGALVTFVAGLLSAFSPN------YISLLIL 104 (478)
Q Consensus 53 ~~~~~~l~~~~~~~~~s~~---------~~G~~~-------------~~~~~~~~~i~~~~~~~a~~------~~~l~~~ 104 (478)
..+..|+++...|.+.... .+|.+. ++.+.+...++..+.-..|+ ...+.+.
T Consensus 36 yt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~ 115 (460)
T PRK11462 36 YTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAIT 115 (460)
T ss_pred HHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHH
Confidence 4455677777666655543 123333 44444444444444333332 3345555
Q ss_pred HHHhhcccCchh-hHHHHHhhccC-CCCchhHHHHHHHHHHHHHHHHHHHHHHHhc-------CcchHHHHHHhhHHHHH
Q 011756 105 RGLAGAGLGSGH-VFFSWFMEFVP-PSNRGKWMVVFSTFWTFGSVSEAALAWIVMP-------ILTWRWLLALSAIPAFV 175 (478)
Q Consensus 105 R~l~Gig~g~~~-~~~~~~~E~~p-~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~-------~~~WR~~f~i~~i~~~l 175 (478)
-++..++..... +..++..|.++ +++|.+..++-..+..+|..+++.+...+.. ..+|+....+.+++.++
T Consensus 116 ~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i 195 (460)
T PRK11462 116 YTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFM 195 (460)
T ss_pred HHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHH
Confidence 555554444332 33456789988 7899999999999988888777666443221 14688887777776655
Q ss_pred HHH
Q 011756 176 LLI 178 (478)
Q Consensus 176 ~~~ 178 (478)
...
T Consensus 196 ~~~ 198 (460)
T PRK11462 196 MLA 198 (460)
T ss_pred HHH
Confidence 543
No 108
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.22 E-value=2.4e-09 Score=109.64 Aligned_cols=180 Identities=13% Similarity=0.200 Sum_probs=103.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHH
Q 011756 265 FFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKL 344 (478)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~ 344 (478)
.++.....+..++......++.....|.+....+ .+............++..++.+..|+++||+|||+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g-----------ls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~ 102 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLN-----------LTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRY 102 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH
Confidence 3445555555555555555555444444442221 11111111223444667888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHH
Q 011756 345 SMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVG 424 (478)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~ 424 (478)
.+..+.++.++..+......+.....+..+...+ ..+.......+.+|.+|++.|+++.|+.+..+++|+.+++.+.+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~-~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~ 181 (476)
T PLN00028 103 GSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGF-SLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPL 181 (476)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH-HHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887766555544433333322222222222222 222233344567899999999999999998888888887766544
Q ss_pred Hhh----c-----cchhHHHHHHHHHHHHHHHHHHhccccc
Q 011756 425 LVT----S-----CHQTAAILLLEALIVLSVVVILLIPFET 456 (478)
Q Consensus 425 l~~----~-----~~~~~~~~~~~~~~~i~~~~~~~~~pet 456 (478)
+.. . .++...+.+.+++.++..+..++++++.
T Consensus 182 i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~ 222 (476)
T PLN00028 182 VFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDL 222 (476)
T ss_pred HHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcC
Confidence 321 1 2344566666766666655656554443
No 109
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.21 E-value=4.2e-08 Score=100.49 Aligned_cols=107 Identities=14% Similarity=0.073 Sum_probs=65.4
Q ss_pred HHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---h-hch-hHHHHHHHHHHHHHhhhhhhhhhhhcccccC
Q 011756 322 TSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---T-LQS-NILLTALLSGARMFSMGTFIIANIFAPEIYP 396 (478)
Q Consensus 322 ~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~---~-~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p 396 (478)
..+..+++.++.+++.||+|||+.+..+..+..+..+... . ..+ .+...+............+...+.+.+|..+
T Consensus 275 ~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id 354 (473)
T PRK10429 275 AGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVD 354 (473)
T ss_pred HHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 3466788888999999999999988766554332222211 1 111 1221111112212222344556778888844
Q ss_pred -----cCh--hHHHHHHHHHHHhHhHhHHHHHHHHHhhc
Q 011756 397 -----TSM--RSTGAGVAYAVGRIGGMVCPLVAVGLVTS 428 (478)
Q Consensus 397 -----~~~--R~~~~g~~~~~~~lg~~~~p~~~~~l~~~ 428 (478)
+.. .|...|....+.+++..+++.+.+.+++.
T Consensus 355 ~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~ 393 (473)
T PRK10429 355 YGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGL 393 (473)
T ss_pred hhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 434 46677888888999999999888877643
No 110
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.17 E-value=2.1e-07 Score=91.26 Aligned_cols=141 Identities=11% Similarity=0.085 Sum_probs=94.2
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
.+..+.+.+...+..++.+|+|-|+.++++..+.++=........+.+.....-..-..-.........-|.++.+|++.
T Consensus 266 s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl 345 (412)
T PF01306_consen 266 SVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL 345 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG
T ss_pred HHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH
Confidence 34456678889999999999999999888777766655544544444432222111111111122345678999999999
Q ss_pred hHHHHHHHHHH-HhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccccCcc
Q 011756 400 RSTGAGVAYAV-GRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKE 460 (478)
Q Consensus 400 R~~~~g~~~~~-~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g~~ 460 (478)
.++...+...+ .+++..+.+.+.+.+.++.|...+|++++.+.+...++..+.++..+.+.
T Consensus 346 sAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~~ 407 (412)
T PF01306_consen 346 SATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQI 407 (412)
T ss_dssp HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCccc
Confidence 99999997544 56888888888899999887667888888888777777777765544433
No 111
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.17 E-value=1e-09 Score=91.87 Aligned_cols=133 Identities=18% Similarity=0.186 Sum_probs=92.1
Q ss_pred hhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHH
Q 011756 324 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTG 403 (478)
Q Consensus 324 ~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~ 403 (478)
++.+++....+++.||+|||+.+..+.....+..+......+.+.................+..+.+..|.+|++.|+++
T Consensus 9 ~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (141)
T TIGR00880 9 LGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVA 88 (141)
T ss_pred hHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHH
Confidence 34556778889999999999988776655554443333333332222222222222233345667888999999999999
Q ss_pred HHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccc
Q 011756 404 AGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 456 (478)
Q Consensus 404 ~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet 456 (478)
.++.+...+++..++|.+.+.+.+..+....+.+.+.+.+++.+..+++.|||
T Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 89 LGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 99999999999999999888776655555566677777777777777777764
No 112
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.16 E-value=2.5e-09 Score=96.68 Aligned_cols=102 Identities=13% Similarity=0.031 Sum_probs=63.8
Q ss_pred hhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH-HHh-hchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHH
Q 011756 326 ELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLP-LVT-LQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTG 403 (478)
Q Consensus 326 ~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~ 403 (478)
..+-..+.|.++||.||+...+.+..+..+..=. +.+ ..+++..+.++-.. .. ......|...+-+.|.+.-|||
T Consensus 313 sav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~lsPy~~m~~lGLs--ys-llAcslWP~va~~vpE~qLGTa 389 (459)
T KOG4686|consen 313 SAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTFLSPYTSMTFLGLS--YS-LLACSLWPCVASLVPEEQLGTA 389 (459)
T ss_pred hhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhhccHHHHHHHHhhh--HH-HHHHHHhhhhhhhCCHHHhcch
Confidence 3445677889999999999877655443322111 111 12333222222111 00 0011246667778888999999
Q ss_pred HHHHHHHHhHhHhHHHHHHHHHhhccc
Q 011756 404 AGVAYAVGRIGGMVCPLVAVGLVTSCH 430 (478)
Q Consensus 404 ~g~~~~~~~lg~~~~p~~~~~l~~~~~ 430 (478)
.|++.++.++|-.+.|++.+.+.+..+
T Consensus 390 ygf~qsIqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 390 YGFIQSIQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred HHHHHHHHhhhhhHHhhhhheeecCCC
Confidence 999999999999999998887766544
No 113
>PRK09848 glucuronide transporter; Provisional
Probab=99.15 E-value=1.7e-07 Score=95.44 Aligned_cols=105 Identities=10% Similarity=0.009 Sum_probs=65.3
Q ss_pred hhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhc--hhHHHHHHHHHHHHHhhhhhhhhhhhcccccCc----
Q 011756 324 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ--SNILLTALLSGARMFSMGTFIIANIFAPEIYPT---- 397 (478)
Q Consensus 324 ~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~---- 397 (478)
++.+++..+.+++.||+|+|+.+..+..+..+..+.+.... +.+.................+..+...+|..|.
T Consensus 275 ~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~ 354 (448)
T PRK09848 275 VGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYL 354 (448)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHh
Confidence 44567788889999999999988877655444333222221 112111111112122223344556666676654
Q ss_pred ---ChhHHHHHHHHHHHhHhHhHHHHHHHHHhhc
Q 011756 398 ---SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 428 (478)
Q Consensus 398 ---~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~ 428 (478)
+.+|...|+.+...++|..+++.+.+.+++.
T Consensus 355 ~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~ 388 (448)
T PRK09848 355 TGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL 388 (448)
T ss_pred hCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4569999999999999999999887776543
No 114
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.12 E-value=7.3e-09 Score=104.13 Aligned_cols=139 Identities=9% Similarity=-0.031 Sum_probs=93.0
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
....++...+.+..+++.||+|||+.+..+.++..+..+......+.......-+...+...+.++....+.+|.+|++.
T Consensus 50 s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~ 129 (412)
T TIGR02332 50 TLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF 129 (412)
T ss_pred HHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH
Confidence 34445667788889999999999999887766655544443333332222222222222222234555678899999999
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHhhc------cchhHHHHHHHHHHHHHHHHHHhccccccC
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLVTS------CHQTAAILLLEALIVLSVVVILLIPFETKG 458 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~~~------~~~~~~~~~~~~~~~i~~~~~~~~~pet~g 458 (478)
|+++.|+.+....+|..++|.+.+.+... .++...+.+.++..++..++.+++.||++.
T Consensus 130 rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 130 RARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 99999999999899999999887766532 345566766666666655666667778763
No 115
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.11 E-value=1.4e-07 Score=90.86 Aligned_cols=146 Identities=16% Similarity=0.199 Sum_probs=96.8
Q ss_pred hhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcc
Q 011756 313 ASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAP 392 (478)
Q Consensus 313 ~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 392 (478)
.+.....+..++.+++|++..+++.||+|-|+++..+.++.....+...+...+.....+-.....+..+..+..-++.+
T Consensus 288 ~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~ 367 (438)
T COG2270 288 TELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLA 367 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 44555667778889999999999999999998877776554433332222222211111111122223345667788999
Q ss_pred cccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHhccccccCc
Q 011756 393 EIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQT-AAILLLEALIVLSVVVILLIPFETKGK 459 (478)
Q Consensus 393 E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~-~~~~~~~~~~~i~~~~~~~~~pet~g~ 459 (478)
++.|++.-+.-+|+-+..+|..++.+|++...+.+..+.. ..+..+..+.+++.+ .+...|+.+.+
T Consensus 368 ~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~-~L~~v~~~~~~ 434 (438)
T COG2270 368 RLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLL-LLLRVKVPGRR 434 (438)
T ss_pred HhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHh-hEEeecCCCCc
Confidence 9999999999999999999999999999988776665542 344455555556544 44444544333
No 116
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.11 E-value=4.5e-09 Score=104.40 Aligned_cols=141 Identities=19% Similarity=0.133 Sum_probs=97.5
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcC
Q 011756 319 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 398 (478)
Q Consensus 319 ~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~ 398 (478)
.....++..++.++.|++.||+|||+.+..+..+..+..+......+.+......+...+......+....+..|.+|.+
T Consensus 46 ~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~ 125 (385)
T TIGR00710 46 LTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGE 125 (385)
T ss_pred HHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcH
Confidence 34445667888899999999999999988876665554444333333322222222222222223455678889999999
Q ss_pred hhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccccCc
Q 011756 399 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGK 459 (478)
Q Consensus 399 ~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g~ 459 (478)
.|+++.|+.+....++..++|.+.+.+.+..++...+.+.+.+.++..+..++..||++.+
T Consensus 126 ~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (385)
T TIGR00710 126 ELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPY 186 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999888776665655666666666666666666667776543
No 117
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.10 E-value=1.2e-08 Score=101.89 Aligned_cols=137 Identities=12% Similarity=0.066 Sum_probs=93.6
Q ss_pred HHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChh
Q 011756 321 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 400 (478)
Q Consensus 321 ~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R 400 (478)
...++..++.++.+.++||+|||+.+..+..+.++..+......+.+.....-....+......+....+.+|.+|.+.|
T Consensus 63 ~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~ 142 (394)
T PRK10213 63 VTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTV 142 (394)
T ss_pred HHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHH
Confidence 44566677888999999999999998887776655444333333333222222222222223345667788899999999
Q ss_pred HHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 401 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 401 ~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
+.+.++......++..++|.+.+.+.+..++...+.+.+.+.++..+......||++
T Consensus 143 ~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 143 PKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 999999999999999999999888777666666666666555555444444457754
No 118
>PRK10054 putative transporter; Provisional
Probab=99.09 E-value=5.8e-09 Score=104.26 Aligned_cols=136 Identities=13% Similarity=0.082 Sum_probs=89.7
Q ss_pred HHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChh
Q 011756 321 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 400 (478)
Q Consensus 321 ~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R 400 (478)
...++.+.+.+..|+++||+|||+.+..+.....+..+...+..+.+.................+....+.+|.+|++.|
T Consensus 51 ~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 130 (395)
T PRK10054 51 IALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSK 130 (395)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHH
Confidence 33456677888999999999999988877665554443333333322222211111111112234567788899999999
Q ss_pred HHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 401 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 401 ~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
+++.|+.+...++|..++|.+.+.+.. .++...+.+.+++.+++.+...++.||++
T Consensus 131 ~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~ 186 (395)
T PRK10054 131 TKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSE 186 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999998876654 45556666666666666555555555543
No 119
>TIGR00895 2A0115 benzoate transport.
Probab=99.09 E-value=3.4e-09 Score=105.56 Aligned_cols=138 Identities=20% Similarity=0.143 Sum_probs=93.2
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
....++.+++.++.++++||+|||+.+..+..+..+..+......+.+......+...+......+....+.+|.+|.+.
T Consensus 59 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (398)
T TIGR00895 59 SAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF 138 (398)
T ss_pred HHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh
Confidence 34456678889999999999999999888766555444433333322222222222222222344567889999999999
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
|+++.|+......+|+.++|.+.+.+.+..++...+.+.+++..+..++.+++.||+.
T Consensus 139 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T TIGR00895 139 RGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESI 196 (398)
T ss_pred hchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999998887766555545555554455555555566667764
No 120
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.08 E-value=7.7e-09 Score=103.74 Aligned_cols=139 Identities=17% Similarity=0.135 Sum_probs=92.1
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcC
Q 011756 319 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 398 (478)
Q Consensus 319 ~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~ 398 (478)
.....++..++.+..|+++||+|||+.+..+..+..+..+......+.+......+..........+....+.+|.+|++
T Consensus 56 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 135 (406)
T PRK11551 56 FSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPR 135 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHH
Confidence 34455677888999999999999999988876555444333333333222222222222222233455678889999999
Q ss_pred hhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 399 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 399 ~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
.|+++.++.+....+|+.++|.+...+.+..++...+.+.+++.++..+...++.||++
T Consensus 136 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (406)
T PRK11551 136 LRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESR 194 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 99999999999999999999987665555444555566655555555555555567764
No 121
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.08 E-value=7.8e-09 Score=104.70 Aligned_cols=167 Identities=17% Similarity=0.227 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhh-chHHHHHHH
Q 011756 271 LLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRV-GRKLSMTIM 349 (478)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~-GRr~~~~~~ 349 (478)
.+........+.+|+...+.+.+.... .+.+................++.+.+|+++||+ |||+.+.++
T Consensus 13 ~l~~~~~~e~fs~Yg~~~~L~~yL~~~----------lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG 82 (493)
T PRK15462 13 YVVALQIWEYFSFYGMRALLILYLTNQ----------LKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLG 82 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHH
Confidence 344444556667787766665443211 011112222222333355567888999999999 999998887
Q ss_pred HHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHhhhhh-hhhhhhcccccCcC--hhHHHHHHHHHHHhHhHhHHHHHHHHH
Q 011756 350 FIFVCIFLLPLVTLQ-SNILLTALLSGARMFSMGTF-IIANIFAPEIYPTS--MRSTGAGVAYAVGRIGGMVCPLVAVGL 425 (478)
Q Consensus 350 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~-~~~~~~~~E~~p~~--~R~~~~g~~~~~~~lg~~~~p~~~~~l 425 (478)
.....+..+.+.... ............ ....|.. +....+.+|.||++ .|.++.++.+..+++|+.++|.+.+.+
T Consensus 83 ~il~~lg~lll~~~~~~~~~~~l~l~li-~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L 161 (493)
T PRK15462 83 ALLMAIGHVVLGASEIHPSFLYLSLAII-VCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYA 161 (493)
T ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHH-HHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHH
Confidence 766554333322211 111111111111 1122222 34567889999986 799999999999999999999999988
Q ss_pred hhccchhHHHHHHHHHHHHHHHH
Q 011756 426 VTSCHQTAAILLLEALIVLSVVV 448 (478)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~i~~~~ 448 (478)
.+..++...|.+.++..+++.+.
T Consensus 162 ~~~~Gw~~~F~iaaigm~l~li~ 184 (493)
T PRK15462 162 QEEYSWAMGFGLAAVGMIAGLVI 184 (493)
T ss_pred HhhhChHHHHHHHHHHHHHHHHH
Confidence 77666656666544444444433
No 122
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.07 E-value=1.5e-06 Score=88.32 Aligned_cols=140 Identities=11% Similarity=0.054 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHHHhHHh-hhhhcCCCcchhhHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHhh
Q 011756 34 LGWFSEAMEVMILSFVGPA-VKSEWGLSSSEESLITTVVFAGMMS------------------ILGGALVTFVAGLLSAF 94 (478)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~s~~~~G~~~------------------~~~~~~~~~i~~~~~~~ 94 (478)
+..+.+.+-...+....|. +.+++|+++.+.+.+.+.+.+.... ++.+.++..++.++.+.
T Consensus 16 ~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~ 95 (493)
T PRK15462 16 ALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGA 95 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444 4667899999988887776543221 34444455555444443
Q ss_pred hc-hHHHHHHHHHHhhcccCch-hhHHHHHhhccCCC--CchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhh
Q 011756 95 SP-NYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPS--NRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSA 170 (478)
Q Consensus 95 a~-~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~--~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~ 170 (478)
.+ +...++++-.+.++|.|.. +...+++.|.+|++ +|....++.....++|..++|.++..+.++.|||+.|.+.+
T Consensus 96 ~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaa 175 (493)
T PRK15462 96 SEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAA 175 (493)
T ss_pred hhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHH
Confidence 32 2223343333444455543 33456789999986 78889999999999999999999999888899999999876
Q ss_pred HHH
Q 011756 171 IPA 173 (478)
Q Consensus 171 i~~ 173 (478)
+..
T Consensus 176 igm 178 (493)
T PRK15462 176 VGM 178 (493)
T ss_pred HHH
Confidence 533
No 123
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.06 E-value=9.1e-09 Score=102.74 Aligned_cols=140 Identities=15% Similarity=0.080 Sum_probs=94.6
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
....++...+.+..|+++||+|||+.+..+.....+.........+........+.........+...+.+..|.+|.+.
T Consensus 45 ~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~ 124 (392)
T PRK10473 45 SVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR 124 (392)
T ss_pred HHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH
Confidence 34445667788999999999999999887766555444333332222222221222222222234556788899999999
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccccCc
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGK 459 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g~ 459 (478)
|+++.++.+....++..++|.+...+.+..++...+.+.+++.++..++.++..||++.+
T Consensus 125 r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 184 (392)
T PRK10473 125 RAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPA 184 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 999999999999999999998877665555555666677776666666666667777543
No 124
>PRK10504 putative transporter; Provisional
Probab=99.06 E-value=1.6e-08 Score=103.70 Aligned_cols=180 Identities=11% Similarity=0.014 Sum_probs=108.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHH
Q 011756 267 KTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSM 346 (478)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~ 346 (478)
+..+.++..++...+..+....+.|.+....+ .+............++...+.++.|+++||+|||+.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g-----------~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~ 78 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQSLG-----------ESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIF 78 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhC-----------cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH
Confidence 34444555555555555555555555442211 1111111122333455677889999999999999988
Q ss_pred HHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHh
Q 011756 347 TIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV 426 (478)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~ 426 (478)
..+..+.++..+......+............+......+....+..|.+|.+.|+++.|+.+..+.+|..++|.+.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~ 158 (471)
T PRK10504 79 FTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLV 158 (471)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 87665554433333332222222222222222222234556778889999999999999999999999999999988887
Q ss_pred hccchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 427 TSCHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 427 ~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
+..++...+.+...+..++.+......|+.+
T Consensus 159 ~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 189 (471)
T PRK10504 159 EYASWHWIFLINIPVGIIGAIATLMLMPNYT 189 (471)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 7666556666666555666666666656543
No 125
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.06 E-value=1.5e-08 Score=107.63 Aligned_cols=107 Identities=17% Similarity=0.127 Sum_probs=76.3
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
....++.++|.+++|+++||+|||+.++++.++.++..+...+..+.+...+.-++..+...+..+..+.+.+|.+|.+.
T Consensus 209 s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~ 288 (742)
T TIGR01299 209 LIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK 288 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Confidence 34457788999999999999999999888766555444433333222222222233333333445678999999999999
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHh
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLV 426 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~ 426 (478)
|++..++...+..+|+++++.+...+.
T Consensus 289 Rg~~~g~~~~~~~iG~ila~~la~~il 315 (742)
T TIGR01299 289 RGEHLSWLCMFWMIGGIYAAAMAWAII 315 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998887665544
No 126
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.06 E-value=1.9e-08 Score=98.42 Aligned_cols=138 Identities=19% Similarity=0.116 Sum_probs=93.7
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
....++..++.+..|+++||+|||+.+..+..+.++..+...+..+.+......+..........+....+..|.+|.+.
T Consensus 39 ~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~ 118 (352)
T PF07690_consen 39 SAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE 118 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccccccccccccchhhh
Confidence 44556678889999999999999998887776665553322222333322222233333333445667889999999999
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
|+++.|+.+....+|..++|.+.+.+.+..++...+++.+++.++..++..++.++.+
T Consensus 119 ~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~ 176 (352)
T PF07690_consen 119 RGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPP 176 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---S
T ss_pred hhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcc
Confidence 9999999999999999999998887765555556677777777777665444444433
No 127
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.04 E-value=5.3e-09 Score=103.83 Aligned_cols=139 Identities=14% Similarity=0.133 Sum_probs=96.2
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
....++..++.+..|+++||+|||+.+..+..+.++.........+.+......+...+......+....+.+|.+|++.
T Consensus 36 ~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~ 115 (399)
T TIGR00893 36 SAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE 115 (399)
T ss_pred HHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH
Confidence 44556678888999999999999998887766555444433333332222222222222223344566789999999999
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccccC
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 458 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g 458 (478)
|+++.++......+|..++|.+.+.+.+..++...+.+.+++.++..+..++..||++.
T Consensus 116 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (399)
T TIGR00893 116 RATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQ 174 (399)
T ss_pred HHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCC
Confidence 99999999999999999999988877666665566666666666666666666666543
No 128
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.04 E-value=1.4e-08 Score=101.81 Aligned_cols=139 Identities=19% Similarity=0.078 Sum_probs=93.6
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
....++..++.++.|.++||+|||+.+..+.....+..+......+.+......+..........+..+.+..|.+|++.
T Consensus 55 ~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~ 134 (406)
T PRK15402 55 TAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD 134 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH
Confidence 34456677888999999999999999887766555544433333322222222122211111223456777889999999
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccccC
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 458 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g 458 (478)
|.++.++......++..++|.+.+.+.+..++...+.+.+++.++..+..++..||++.
T Consensus 135 ~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 135 AIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAG 193 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 99999999888888889999887777665555566777777766666666666788754
No 129
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.03 E-value=2.6e-08 Score=102.74 Aligned_cols=164 Identities=19% Similarity=0.197 Sum_probs=100.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhch
Q 011756 263 PRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGR 342 (478)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GR 342 (478)
++.++....+++.++.+.+.+.......|.+....+ .+............++..++.+..|+++||+||
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----------~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~ 84 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFG-----------LTTVQAASLISAAFISRWFGGLLLGAMGDRYGR 84 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 334444444555555555555544444454432211 111111222334456678889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHH
Q 011756 343 KLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVA 422 (478)
Q Consensus 343 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~ 422 (478)
|+.+..+..+.++..+......+.+......+...+...+.++....+..|.+|.+.|+++.++.+....+|+.++|.+.
T Consensus 85 r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 164 (496)
T PRK03893 85 RLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVY 164 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888776655544443333333322222222222223334556678889999999999999999999999999999988
Q ss_pred HHHhhccchhHHHHH
Q 011756 423 VGLVTSCHQTAAILL 437 (478)
Q Consensus 423 ~~l~~~~~~~~~~~~ 437 (478)
+.+.+..++...+.+
T Consensus 165 ~~l~~~~~w~~~f~~ 179 (496)
T PRK03893 165 SLVVPVWGWRALFFI 179 (496)
T ss_pred HHHhccCCHHHHHHH
Confidence 877665554444443
No 130
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.03 E-value=2.5e-08 Score=99.62 Aligned_cols=137 Identities=17% Similarity=0.122 Sum_probs=87.5
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
....++..++.+..|+++||+|||+.+..+..+..+..+......+.+......+.......+.++....+..|.+|.+.
T Consensus 54 ~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~ 133 (405)
T TIGR00891 54 SAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL 133 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh
Confidence 34456678889999999999999999887766555444433333332222222222222222344556778889999999
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH--QTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~--~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
|+++.|+.+....+|..++|.+...+.+..+ +...+.+.+...++ .++.....||++
T Consensus 134 ~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~-~~~~~~~~~~~~ 192 (405)
T TIGR00891 134 RNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIF-ALWLRKNIPEAE 192 (405)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHH-HHHHHHhCCCCh
Confidence 9999999999999999999988776665443 33344433333333 333444457754
No 131
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.02 E-value=2.1e-08 Score=100.87 Aligned_cols=138 Identities=12% Similarity=0.050 Sum_probs=94.1
Q ss_pred HHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChh
Q 011756 321 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 400 (478)
Q Consensus 321 ~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R 400 (478)
+..++...+.+..|+++||+|||+.+..+..+.++..+......+.....+.-+.............+.+..|.+|.+.|
T Consensus 59 ~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~ 138 (413)
T PRK15403 59 LYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKG 138 (413)
T ss_pred HHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 33466677888999999999999998877665554444333333322222222222211111223456788899999999
Q ss_pred HHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccccC
Q 011756 401 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 458 (478)
Q Consensus 401 ~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g 458 (478)
+++.++.+....++..++|.+.+.+.+..++...|.+.+++.++..+..++..||++.
T Consensus 139 ~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 139 IKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 9999999999999999999887777665566677777777777766665666788754
No 132
>PRK03545 putative arabinose transporter; Provisional
Probab=99.00 E-value=4.1e-08 Score=98.00 Aligned_cols=137 Identities=9% Similarity=0.026 Sum_probs=91.6
Q ss_pred HHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChh
Q 011756 321 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 400 (478)
Q Consensus 321 ~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R 400 (478)
...++..++.+..+.+.||+|||+++..+..+.++..+......+.+...+.-..........++....+.+|.+|.+.|
T Consensus 52 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r 131 (390)
T PRK03545 52 IYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKK 131 (390)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhh
Confidence 33445566777888999999999998887766555444433333332222222222222222234556788899999999
Q ss_pred HHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 401 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 401 ~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
+++.|+......++..++|.+...+.+..++...+.+.++++++..+......||.+
T Consensus 132 ~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 188 (390)
T PRK03545 132 AQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLP 188 (390)
T ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999998877766556666777777766666555555556543
No 133
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.00 E-value=3.2e-08 Score=99.95 Aligned_cols=118 Identities=19% Similarity=0.134 Sum_probs=81.2
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
....++...+.+..|+++||+|||+.+..+....++.........+.+...+.-+.......+.++....+..|.+|++.
T Consensus 60 ~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~ 139 (426)
T PRK12307 60 TAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL 139 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH
Confidence 34556778889999999999999999988776665544443333333222222222222222345566778899999999
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHH
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILL 437 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~ 437 (478)
|+++.|+......+|..++|.+.+.+.+..++...+++
T Consensus 140 r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i 177 (426)
T PRK12307 140 KSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFV 177 (426)
T ss_pred hhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHH
Confidence 99999999988889999998887766665555445544
No 134
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.00 E-value=7.9e-08 Score=93.11 Aligned_cols=378 Identities=16% Similarity=0.136 Sum_probs=203.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHH-----HHHH------------HHHHHH
Q 011756 21 FGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFA-----GMMS------------ILGGAL 83 (478)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~-----G~~~------------~~~~~~ 83 (478)
.-+.+|.+++.+.+-.++++++-...+...-..+.-|+ +++...|+.-.+++ |... ...+..
T Consensus 39 Vy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ 117 (480)
T KOG2563|consen 39 VYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTV 117 (480)
T ss_pred cchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHH
Confidence 34788888888888889999888877777777777788 55555555544432 2111 344444
Q ss_pred HHHHHHHHHhhhc------hHH--HHHHHHHHhhcccCchhhH-HHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 011756 84 VTFVAGLLSAFSP------NYI--SLLILRGLAGAGLGSGHVF-FSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAW 154 (478)
Q Consensus 84 ~~~i~~~~~~~a~------~~~--~l~~~R~l~Gig~g~~~~~-~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~ 154 (478)
.-.+++.+-..+. .++ ....+..+.+.+.--.... .-.-.-|+|+++|..++.+-..+..+|..++.++.-
T Consensus 118 ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llpp 197 (480)
T KOG2563|consen 118 LNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPP 197 (480)
T ss_pred HHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccc
Confidence 5555554433332 222 3445555544332111111 123356789999999998888888888888777766
Q ss_pred HHhcC------cchHHH--HHHhhHHHHH-HHHHHHhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q 011756 155 IVMPI------LTWRWL--LALSAIPAFV-LLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTN 225 (478)
Q Consensus 155 ~~~~~------~~WR~~--f~i~~i~~~l-~~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 225 (478)
.+.++ ..|-.- |......+.+ +.+.....+|.|+. |+...
T Consensus 198 ilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~t-------------------------Pps~s------ 246 (480)
T KOG2563|consen 198 ILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPT-------------------------PPSAS------ 246 (480)
T ss_pred eecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC-------------------------CCchh------
Confidence 55443 357663 4433322222 22233334443331 00000
Q ss_pred CcccccCCCCcccccccccccccccccccchhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccc
Q 011756 226 DLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSIL 305 (478)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 305 (478)
+ +..+ + ..-.++.+.+++.+ +.+++.+.+..+...+|+....+.......
T Consensus 247 ---~-----~~~~--~---------~~f~~si~~~~~n~---~F~il~~~ygi~~g~F~~l~~~l~~~l~~s-------- 296 (480)
T KOG2563|consen 247 ---Q-----AALQ--D---------ASFPKSIKSCFKNR---QFIILAICYGIGLGLFNSLSTLLNLALCPS-------- 296 (480)
T ss_pred ---H-----hhhh--c---------CcHHHHHHHHHcCc---cHHHHHHHHhhhHHHHHHHHHHhhhccccc--------
Confidence 0 0000 0 00012333344322 233444555555555555554433111000
Q ss_pred cccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHH-HHHHHHHHHHHHHHHH-Hhh---chhHHHHHHHHHHHHHh
Q 011756 306 LSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKL-SMTIMFIFVCIFLLPL-VTL---QSNILLTALLSGARMFS 380 (478)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~-~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~ 380 (478)
.......+ ....+..+++..|+++.|.+.||.+.-+ .+........+..+.+ ... .+.++........+++.
T Consensus 297 -gY~~~~aG--~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~ 373 (480)
T KOG2563|consen 297 -GYEGVFAG--YIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFG 373 (480)
T ss_pred -cCCccccc--hhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhh
Confidence 01111111 2234445667889999999999986543 3333332222221111 111 11222222222333455
Q ss_pred hhhhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccc----hhHHHHHHHHHHHHHHHHHHhccccc
Q 011756 381 MGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH----QTAAILLLEALIVLSVVVILLIPFET 456 (478)
Q Consensus 381 ~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~----~~~~~~~~~~~~~i~~~~~~~~~pet 456 (478)
.+..++.+-...|.-=+..-++..|+.+..|++.+++-+++.+...+..+ +...-+.+...++.+.+++.++.|+-
T Consensus 374 ~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y 453 (480)
T KOG2563|consen 374 TGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDY 453 (480)
T ss_pred cCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhH
Confidence 56667777788888666778889999999999988888887776655544 23334555666677777888888887
Q ss_pred cCcccch
Q 011756 457 KGKELVN 463 (478)
Q Consensus 457 ~g~~l~~ 463 (478)
|.++.|+
T Consensus 454 ~R~~~e~ 460 (480)
T KOG2563|consen 454 RRLRAEA 460 (480)
T ss_pred HhHhhhh
Confidence 7766654
No 135
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.00 E-value=2.7e-08 Score=100.83 Aligned_cols=137 Identities=12% Similarity=0.081 Sum_probs=92.6
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
....++..++.+..|++.||+|||+.+.++..+.++..+......+.+......+...+.....++....+.+|.+|.+.
T Consensus 65 ~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~ 144 (434)
T PRK11663 65 TLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE 144 (434)
T ss_pred HHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH
Confidence 44556778889999999999999999888777666555444333332222222222222222234556788899999999
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccc
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 456 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet 456 (478)
|+++.|+.+..+.+|+.++|.+.+.+.+..++...+.+.+++.++..+...+..||+
T Consensus 145 rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 145 RGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999888777666666666666655554444444444553
No 136
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.99 E-value=1.7e-08 Score=103.79 Aligned_cols=139 Identities=14% Similarity=0.037 Sum_probs=96.2
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
....++..++.++.++++||+|||+.+..+..+..+..+......+........+...+......+....+..|.+|++.
T Consensus 44 ~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~ 123 (485)
T TIGR00711 44 TSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK 123 (485)
T ss_pred HHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH
Confidence 44556778889999999999999999888776655544444333332222222223222233344567888999999999
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccccC
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 458 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g 458 (478)
|+++.++......+|..++|.+.+.+.+..++...+++.+.+.++..++..+..||.+.
T Consensus 124 r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 182 (485)
T TIGR00711 124 RGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKP 182 (485)
T ss_pred HHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccc
Confidence 99999999999999999999988877766555556666665656555566666666543
No 137
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.98 E-value=7e-07 Score=88.65 Aligned_cols=286 Identities=17% Similarity=0.161 Sum_probs=153.8
Q ss_pred HHHHHHHHHHHHHHHhhhch------HHHHHHHHHHhhcccCchh-hHHHHHhhccC-CCCchhHHHHHHHHHHHHHHHH
Q 011756 78 ILGGALVTFVAGLLSAFSPN------YISLLILRGLAGAGLGSGH-VFFSWFMEFVP-PSNRGKWMVVFSTFWTFGSVSE 149 (478)
Q Consensus 78 ~~~~~~~~~i~~~~~~~a~~------~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p-~~~Rg~~~~~~~~~~~~G~~~~ 149 (478)
++.+.+..++.+.++-.+++ ....++.-.+.|++..... +..++..|+.+ ++||-+..++-+.+..+|.++.
T Consensus 86 lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~ 165 (467)
T COG2211 86 LLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLV 165 (467)
T ss_pred HHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566666666666666663 3445566666666655433 23355677776 4799999999999999998776
Q ss_pred HHHHHHHh----c---CcchHHHHHHhhHHHHHHHHHH-HhcCCCchhhhhcCChhHHHHHHHHHHHHcCCCCCCCCCCC
Q 011756 150 AALAWIVM----P---ILTWRWLLALSAIPAFVLLIFI-VFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTS 221 (478)
Q Consensus 150 ~~~~~~~~----~---~~~WR~~f~i~~i~~~l~~~~~-~~lpESP~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 221 (478)
..+...+. + ..|||..-.+.++.+++..++- +...|-+. |+ . +.
T Consensus 166 ~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~---------~~-----------------~--~~ 217 (467)
T COG2211 166 AVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVV---------ET-----------------Q--PT 217 (467)
T ss_pred HHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccC---------cc-----------------c--cC
Confidence 65554332 1 4589998888887776664443 33444321 00 0 00
Q ss_pred CCCCCcccccCCCCcccccccccccccccccccchhhcccCcchHHHHHHHHH-HHHHHHHHHHHHHHHHHhhhCCCCCc
Q 011756 222 DGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWV-LYFGNSFVYYGIVLLASELSGSQSKC 300 (478)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~ 300 (478)
++.++.+. ..++..+++.|.++..++..+ .+.+.++..-...++...
T Consensus 218 ----------~~~~~~~~--------------~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y-------- 265 (467)
T COG2211 218 ----------KTGVKLKL--------------KDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTY-------- 265 (467)
T ss_pred ----------cccccccH--------------HHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEE--------
Confidence 00000000 012233333333322222222 122221111111111000
Q ss_pred ccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhch--hHHHHHHHHHHHH
Q 011756 301 SSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS--NILLTALLSGARM 378 (478)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 378 (478)
..+..+..............+.+.++...+.+|+|+|+++.++..+..+....+.+... .....+..++...
T Consensus 266 ------~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~ 339 (467)
T COG2211 266 ------VLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGV 339 (467)
T ss_pred ------EcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHH
Confidence 01122222222334444556667889999999999999998887665554444333222 2222222233333
Q ss_pred HhhhhhhhhhhhcccccC-----cChh--HHHHHHHHHHHhHhHhHHHHHHHHHhhcc
Q 011756 379 FSMGTFIIANIFAPEIYP-----TSMR--STGAGVAYAVGRIGGMVCPLVAVGLVTSC 429 (478)
Q Consensus 379 ~~~g~~~~~~~~~~E~~p-----~~~R--~~~~g~~~~~~~lg~~~~p~~~~~l~~~~ 429 (478)
.....++..|+..+|... +..| |...|....+.++|..++.++.+.++...
T Consensus 340 g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~ 397 (467)
T COG2211 340 GTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAI 397 (467)
T ss_pred HhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 344456678888886643 3333 77778888889999999988877766443
No 138
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.98 E-value=6.1e-08 Score=95.27 Aligned_cols=132 Identities=14% Similarity=0.041 Sum_probs=86.8
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhc-----hhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ-----SNILLTALLSGARMFSMGTFIIANIFAPEI 394 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~ 394 (478)
.+..++..++.+..|+++||+|||+.+..+..+..+......... +.+..........+......+....+.+|.
T Consensus 41 ~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 120 (365)
T TIGR00900 41 LAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDL 120 (365)
T ss_pred HHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344566777889999999999999998877655443333222211 222222222222222222345567889999
Q ss_pred cCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHh
Q 011756 395 YPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILL 451 (478)
Q Consensus 395 ~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 451 (478)
+|++.|+++.|+.+....+|..++|.+.+.+.+..++...+.+.+...++..+....
T Consensus 121 ~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 177 (365)
T TIGR00900 121 VPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVS 177 (365)
T ss_pred CCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999998887766655555555555544444444443
No 139
>PRK03699 putative transporter; Provisional
Probab=98.98 E-value=8.3e-08 Score=95.92 Aligned_cols=128 Identities=15% Similarity=0.146 Sum_probs=83.6
Q ss_pred HHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChh
Q 011756 321 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 400 (478)
Q Consensus 321 ~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R 400 (478)
...++...+.++.+++.||+|||+.+..+..+.++..+......+.+...+..+..........+....+..|.+|++.|
T Consensus 50 ~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r 129 (394)
T PRK03699 50 FLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQR 129 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchH
Confidence 44566788899999999999999988877655554443333333332222222222222222334556778899999999
Q ss_pred HHHHHHHHHHHhHhHhHHHHHHHHHhhc-cchhHHHHHHHHHHHHHHHH
Q 011756 401 STGAGVAYAVGRIGGMVCPLVAVGLVTS-CHQTAAILLLEALIVLSVVV 448 (478)
Q Consensus 401 ~~~~g~~~~~~~lg~~~~p~~~~~l~~~-~~~~~~~~~~~~~~~i~~~~ 448 (478)
+.+.+..+....+++.++|.+.+.+... .++...+.+.+.+.++..++
T Consensus 130 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 130 GSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 9999998888888889999887766543 34555666656555544433
No 140
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.95 E-value=2.3e-08 Score=99.14 Aligned_cols=138 Identities=14% Similarity=0.097 Sum_probs=96.0
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
....++...+.+..|+++||+|||+.+..+.....+.........+.+......+...++.....+....+..|.+|.+.
T Consensus 33 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~ 112 (377)
T PRK11102 33 SAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE 112 (377)
T ss_pred HHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 34456677888999999999999999888776655544444333332222222222222222334456788899999999
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
|+++.++.+....+|..++|.+.+.+.+..++...+.+.+.+.++..+...+..||++
T Consensus 113 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 113 FSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETL 170 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 9999999999999999999998877766555556666666766666666666667764
No 141
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.94 E-value=8.2e-08 Score=95.92 Aligned_cols=139 Identities=17% Similarity=0.032 Sum_probs=88.5
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
....++..++.+..|+++||+|||+.+..+.....+..+......+.+......+...+......+....+..|.+|.+.
T Consensus 50 ~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 129 (394)
T PRK11652 50 AAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ 129 (394)
T ss_pred HHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH
Confidence 44556678888999999999999998887765554443333332222222222122211111222344567788999999
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccccC
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 458 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g 458 (478)
|+.+.++.+....++..++|.+.+.+.+..++...+.+.+.+.++..+...++.||++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 130 LRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 99999998888888888999887776665555556666655555554555556677643
No 142
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.92 E-value=1.2e-07 Score=97.62 Aligned_cols=136 Identities=17% Similarity=0.062 Sum_probs=90.5
Q ss_pred HhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhccccc-CcChhH
Q 011756 323 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIY-PTSMRS 401 (478)
Q Consensus 323 ~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~-p~~~R~ 401 (478)
.++...+.+..|+++||+|||+.+..+..+..+..+......+.+...+.-........+..+.......+.+ |++.|+
T Consensus 51 ~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~ 130 (495)
T PRK14995 51 SLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRN 130 (495)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 4445566788999999999999998877666554444443333332222222222222222233344444554 789999
Q ss_pred HHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccccC
Q 011756 402 TGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 458 (478)
Q Consensus 402 ~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g 458 (478)
++.|+......+|..++|.+.+.+.+..++.+.|++...+.++..++..++.||.++
T Consensus 131 ~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~ 187 (495)
T PRK14995 131 MALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAG 187 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999998888777666677777666666666666666777543
No 143
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.91 E-value=8e-08 Score=97.88 Aligned_cols=138 Identities=14% Similarity=0.043 Sum_probs=83.7
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh----chhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL----QSNILLTALLSGARMFSMGTFIIANIFAPEIY 395 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~ 395 (478)
....++..++.++.|+++||+|||+++..+..+.++..+..... .+........+...++....++.......|.+
T Consensus 70 ~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~ 149 (452)
T PRK11273 70 SGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWW 149 (452)
T ss_pred HHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhC
Confidence 44556678889999999999999998888776555444433321 11112222222222222222344455677999
Q ss_pred CcChhHHHHHHHHHHHhHhHh-HHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 396 PTSMRSTGAGVAYAVGRIGGM-VCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 396 p~~~R~~~~g~~~~~~~lg~~-~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
|++.|+++.|+.+....+|+. .+|.+...+....++...+++.+.+.++..++.+++.||+.
T Consensus 150 ~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~ 212 (452)
T PRK11273 150 SQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTP 212 (452)
T ss_pred ChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCH
Confidence 999999999998888888764 45543322322234455666666666665555666666653
No 144
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.90 E-value=5.1e-08 Score=98.92 Aligned_cols=138 Identities=16% Similarity=0.097 Sum_probs=88.3
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhc---hhH-HHHHHHHHHHHHhhhhhhhhhhhccccc
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ---SNI-LLTALLSGARMFSMGTFIIANIFAPEIY 395 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~g~~~~~~~~~~E~~ 395 (478)
....++..++.+..|+++||+|||+.+..+..+.++..+...... +.. ......+...+.....++.......|.+
T Consensus 68 ~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~ 147 (438)
T TIGR00712 68 SAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWW 147 (438)
T ss_pred HHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhc
Confidence 445567788899999999999999988776655554433332211 111 1111112222221122344566777999
Q ss_pred CcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhc-cchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 396 PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS-CHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 396 p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~-~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
|++.|+++.|+.+....+++.++|.+....... .++...+.+.++++++..+..+++.||++
T Consensus 148 ~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~ 210 (438)
T TIGR00712 148 SQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTP 210 (438)
T ss_pred CcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 999999999999999999999888776654433 34455666667776666666666666653
No 145
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.89 E-value=1.1e-08 Score=101.07 Aligned_cols=138 Identities=15% Similarity=0.115 Sum_probs=90.8
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
....++..++.+..|+++||+|||+.+..+..+.++..+......+.+...+..+...+......+....+.+|.+|.+.
T Consensus 37 ~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 116 (379)
T TIGR00881 37 SSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE 116 (379)
T ss_pred HHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh
Confidence 44456677888999999999999999888776655544444333333322222222222222334566788999999999
Q ss_pred hHHHHHHHHHHHhHhHhHHHH-HHHHHhhccchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 400 RSTGAGVAYAVGRIGGMVCPL-VAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~-~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
|+++.++.+....+|+.++|. +...+....++...+.+.+++.++..+..+++.||++
T Consensus 117 r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 117 RGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSP 175 (379)
T ss_pred heeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCc
Confidence 999999999999999999984 4444444444455566666666655555666656543
No 146
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.89 E-value=1.2e-07 Score=94.32 Aligned_cols=138 Identities=11% Similarity=0.031 Sum_probs=93.5
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
....++..++.+..|+++||+|||+.+..+..+.++..+......+.+......+...+......+....+..|.+|.+.
T Consensus 45 s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~ 124 (382)
T PRK10091 45 SYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK 124 (382)
T ss_pred HHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH
Confidence 44457778899999999999999999888776666554444443333322222222222212223444667789999999
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
|+.+.++......++..++|.+...+.+..++...+.+.+...++..+..++..||.+
T Consensus 125 ~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 125 VTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred hhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999988888999999888776666556666677766666666555566677754
No 147
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.89 E-value=5.1e-08 Score=96.84 Aligned_cols=168 Identities=17% Similarity=0.170 Sum_probs=112.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhH-Hhhhh-hcCCCcchhhHHHHHHHHHHHH------------------HHH
Q 011756 21 FGKFQGLALAYSGLGWFSEAMEVMILSFVG-PAVKS-EWGLSSSEESLITTVVFAGMMS------------------ILG 80 (478)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~l~~~~~~~~~s~~~~G~~~------------------~~~ 80 (478)
-.+.+|+.+.++.+-.++.+.+..+..... |.+++ |.+-+.+-.|++.++..+|-++ ++.
T Consensus 28 ~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~ 107 (488)
T KOG2325|consen 28 ERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIV 107 (488)
T ss_pred ccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHH
Confidence 357788877777666666666654333332 22322 2344556689999998888665 566
Q ss_pred HHHHHHHHHHHH---h-hhc-hHHHHHHHHHHhhcccCchhhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 011756 81 GALVTFVAGLLS---A-FSP-NYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWI 155 (478)
Q Consensus 81 ~~~~~~i~~~~~---~-~a~-~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~ 155 (478)
+.++..++.++- . ..+ .-+.++++|++.|+|.|...+.-+|++..+..++|-|+.+....+..+|..+||.+...
T Consensus 108 s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~ 187 (488)
T KOG2325|consen 108 SFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLA 187 (488)
T ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHH
Confidence 666666666443 2 233 56789999999999999887888899999999999999999999889999988888766
Q ss_pred Hhc--Ccc-----------hHHHHHHhhHHHHHHHH-HHHhcCCCch
Q 011756 156 VMP--ILT-----------WRWLLALSAIPAFVLLI-FIVFMPESPR 188 (478)
Q Consensus 156 ~~~--~~~-----------WR~~f~i~~i~~~l~~~-~~~~lpESP~ 188 (478)
+.+ ..| .-.+-|+..+..++.++ +..++.|.+|
T Consensus 188 f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 188 FTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred HhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 533 112 22233445444444433 3445677654
No 148
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.88 E-value=2.3e-07 Score=92.96 Aligned_cols=133 Identities=11% Similarity=-0.020 Sum_probs=87.0
Q ss_pred HhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHH
Q 011756 323 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 402 (478)
Q Consensus 323 ~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~ 402 (478)
.+......++.|.++||+|||+.+..+.....+..+......+.+.................+....+..|.+|++.|++
T Consensus 56 ~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (400)
T PRK11646 56 QFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGR 135 (400)
T ss_pred HHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 34445556888999999999999888776666554444433333322222222222111223445677889999999999
Q ss_pred HHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccc
Q 011756 403 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 456 (478)
Q Consensus 403 ~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet 456 (478)
+.|+.+...++|..++|.+.+.+. ..++...+.+.+...++..+...+..||.
T Consensus 136 a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 136 FFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999999999999999999888776 44555556665555555544444455653
No 149
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.88 E-value=9.8e-08 Score=94.27 Aligned_cols=136 Identities=13% Similarity=-0.011 Sum_probs=88.6
Q ss_pred HHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChh
Q 011756 321 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 400 (478)
Q Consensus 321 ~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R 400 (478)
...++..++.+..|+++||+|||+++..................+.......-+.. ....+.....+...+|.+|++.|
T Consensus 34 ~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~-G~g~~~~~~~~~~~~~~~~~~~r 112 (368)
T TIGR00903 34 TYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLA-ALGQPFLLNAFAPAASQIREERR 112 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH-HhHhHHHHHHHHHHHHHcCHHHH
Confidence 34466778888999999999999876544332222211111111111111111111 12223333445556899999999
Q ss_pred HHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 401 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 401 ~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
+++.++......+|+.+++.+...+.+..++...+.+.+++.++..++.++..||.+
T Consensus 113 ~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 113 DLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999988887776666666777767777777777777778754
No 150
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.87 E-value=1.6e-07 Score=92.74 Aligned_cols=107 Identities=21% Similarity=0.252 Sum_probs=72.2
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcC
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ-SNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 398 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~ 398 (478)
....++..++.+..|+++||+|||+.+..+..+..+..+...... +.+......+... ...+.+.....+.+|.+|++
T Consensus 44 ~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~ 122 (366)
T TIGR00886 44 AVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIG-IAGGSFASCMPWISFFFPKK 122 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH-HhchhhHhHHHHHHHhcCHh
Confidence 445567788899999999999999998887766655444433333 2222221212221 12233445567888999999
Q ss_pred hhHHHHHHHHHHHhHhHhHHHHHHHHHhh
Q 011756 399 MRSTGAGVAYAVGRIGGMVCPLVAVGLVT 427 (478)
Q Consensus 399 ~R~~~~g~~~~~~~lg~~~~p~~~~~l~~ 427 (478)
.|+++.++....+++|..+++.+.+.+..
T Consensus 123 ~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 123 IQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999999998888888887777665543
No 151
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.85 E-value=1.6e-07 Score=96.12 Aligned_cols=169 Identities=17% Similarity=0.126 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhh-hchHHHHHHH
Q 011756 271 LLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDR-VGRKLSMTIM 349 (478)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr-~GRr~~~~~~ 349 (478)
.++...+...+.||+...+.+.+..... ..+.+............+...++.+++|+++|| +|||+.+..+
T Consensus 14 ~l~~~~~~~~~~~~~~~~~L~~yl~~~~--------~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~ 85 (475)
T TIGR00924 14 TLFFVELWERFSYYGMQGILAVYLVQQA--------GLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLG 85 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHH
Confidence 3444555667777877666554432110 001111122222334456678889999999999 8999998888
Q ss_pred HHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhh-hhhhhhhhcccccCcCh---hHHHHHHHHHHHhHhHhHHHHHHHHH
Q 011756 350 FIFVCIFLLPLVTLQSNILLTALLSGARMFSMG-TFIIANIFAPEIYPTSM---RSTGAGVAYAVGRIGGMVCPLVAVGL 425 (478)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~E~~p~~~---R~~~~g~~~~~~~lg~~~~p~~~~~l 425 (478)
..+.++..+.+....+........... ....+ ..+....+.+|.+|.+. |+++.++.+...++|+.++|.+.+.+
T Consensus 86 ~~~~~~g~~~~~~~~~~~~~~~~~~l~-g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l 164 (475)
T TIGR00924 86 GIVLMLGHFMLAMSIYPDLIFYGLGTI-AVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVI 164 (475)
T ss_pred HHHHHHHHHHHHhcccHhHHHHHHHHH-HhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHH
Confidence 766655444433332222221111111 12222 23455678889998754 89999999999999999999998887
Q ss_pred hhccchhHHHHHHHHHHHHHHHH
Q 011756 426 VTSCHQTAAILLLEALIVLSVVV 448 (478)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~i~~~~ 448 (478)
.+..++...+.+.++..+++.+.
T Consensus 165 ~~~~g~~~~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 165 AENYGYHVGFNLAAVGMVIGLLT 187 (475)
T ss_pred HHhcChHHHHHHHHHHHHHHHHH
Confidence 76555555665555444444433
No 152
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.83 E-value=9.3e-08 Score=94.37 Aligned_cols=136 Identities=14% Similarity=0.071 Sum_probs=84.2
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcC
Q 011756 319 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 398 (478)
Q Consensus 319 ~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~ 398 (478)
.....++..++.+..|.++||+|||+.+..+..+.++..+......+.+................++.......|.+| +
T Consensus 44 ~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~ 122 (377)
T TIGR00890 44 FTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-D 122 (377)
T ss_pred HHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-c
Confidence 345556778889999999999999999888776655544443333332222222222222112223344455667777 5
Q ss_pred hhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhcccc
Q 011756 399 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFE 455 (478)
Q Consensus 399 ~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pe 455 (478)
.|+++.++......+|..+++.+...+.+..++...+.+.+++.++..+..+++.+|
T Consensus 123 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 179 (377)
T TIGR00890 123 KRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGY 179 (377)
T ss_pred ccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheec
Confidence 699999999888888887766555655554455556666666666665555555443
No 153
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.82 E-value=4.1e-07 Score=91.24 Aligned_cols=135 Identities=19% Similarity=0.125 Sum_probs=89.5
Q ss_pred HHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChh
Q 011756 321 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 400 (478)
Q Consensus 321 ~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R 400 (478)
+..+...++.+..|+++||+|||+.+..+....++..+......+.+..........+ ..+..+....+..|.+|.+.|
T Consensus 62 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~ 140 (408)
T PRK09874 62 ITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGL-LGGFVPNANALIATQVPRNKS 140 (408)
T ss_pred HHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH-hhhhHHhHHHHHHHhcCHhhh
Confidence 3445567778889999999999998887665554443333332222222211112111 223344456677789999999
Q ss_pred HHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccc
Q 011756 401 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 456 (478)
Q Consensus 401 ~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet 456 (478)
+++.|+.+....+|..++|.+.+.+.+..++...+.+.+++.++..+..+++.||.
T Consensus 141 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 141 GWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999888776655555667777766666666666655654
No 154
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.82 E-value=2.9e-07 Score=95.08 Aligned_cols=107 Identities=19% Similarity=0.147 Sum_probs=73.2
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhch------hHHHHHHHHHHHHHhhhhhhhhhhhcc
Q 011756 319 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS------NILLTALLSGARMFSMGTFIIANIFAP 392 (478)
Q Consensus 319 ~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~g~~~~~~~~~~ 392 (478)
.....++.+++.+..+++.||+|||+.+..+..+..+..+......+ .....+.-+...+...+.++....+.+
T Consensus 62 ~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~ 141 (502)
T TIGR00887 62 NGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITS 141 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 34455778899999999999999999887766554443333222211 111222222232333344567789999
Q ss_pred cccCcChhHHHHHHHHHHHhHhHhHHHHHHHHH
Q 011756 393 EIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGL 425 (478)
Q Consensus 393 E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l 425 (478)
|.+|++.|+++.++.+....+|..+++.+...+
T Consensus 142 e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~ 174 (502)
T TIGR00887 142 EFATKKWRGAMMAAVFAMQGFGILAGAIVALIV 174 (502)
T ss_pred HhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888888765543
No 155
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.80 E-value=1.2e-07 Score=95.54 Aligned_cols=148 Identities=12% Similarity=0.050 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhchHH
Q 011756 37 FSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFSPNYI 99 (478)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a~~~~ 99 (478)
..+..+.....+..+.. .+.+.+..+.|.+.+...++... +..+.++..++.++.++++|.+
T Consensus 238 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~ 316 (420)
T PRK09528 238 FYDVFDQQFPNFFASFF-ATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPL 316 (420)
T ss_pred HHHHHHHHHHHHHHHHH-hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHH
Confidence 34444444333333322 22355566777776655433222 3444445555556677889999
Q ss_pred HHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHH-HHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHHHH-
Q 011756 100 SLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVV-FSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVL- 176 (478)
Q Consensus 100 ~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~-~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~l~- 176 (478)
.+++.+++.|++.+.. .....++.|..|++.|+...+. ++....+|.++++.+.+.+.+..|||..|.+.++..++.
T Consensus 317 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~ 396 (420)
T PRK09528 317 EVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFT 396 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHH
Confidence 9999999999877654 3445678899999999987654 667788999999999999888889999999877655544
Q ss_pred HHHHHhcCC
Q 011756 177 LIFIVFMPE 185 (478)
Q Consensus 177 ~~~~~~lpE 185 (478)
.+.+..+++
T Consensus 397 ~~~~~~~~~ 405 (420)
T PRK09528 397 LISVFTLSG 405 (420)
T ss_pred HHHHHHhcC
Confidence 334444443
No 156
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.78 E-value=1.5e-07 Score=78.50 Aligned_cols=101 Identities=25% Similarity=0.359 Sum_probs=81.2
Q ss_pred HHHHHHHhhhchHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHH
Q 011756 86 FVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRW 164 (478)
Q Consensus 86 ~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~ 164 (478)
.++.+....+++++.+.+.+++.|++.+.. +....+..|..|+++|++..++.+....+|..+++.+...+.+..+||+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 118 (141)
T TIGR00880 39 VLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRA 118 (141)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHH
Confidence 334444455688999999999999988765 3456778999999999999999999999999999999988888889999
Q ss_pred HHHHhhHHHHHHHH-HHHhcCCC
Q 011756 165 LLALSAIPAFVLLI-FIVFMPES 186 (478)
Q Consensus 165 ~f~i~~i~~~l~~~-~~~~lpES 186 (478)
.+.+.++..++..+ ..++.||+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 119 PFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCC
Confidence 99988876666544 44445664
No 157
>PRK11043 putative transporter; Provisional
Probab=98.78 E-value=6.6e-07 Score=89.62 Aligned_cols=136 Identities=17% Similarity=0.101 Sum_probs=88.7
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
.+..++...+.++.|+++||+|||+.+..+..+..+..+......+.+......+..................|.+|.+.
T Consensus 48 s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~ 127 (401)
T PRK11043 48 SLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK 127 (401)
T ss_pred HHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH
Confidence 34456678889999999999999999887765554443333332222222211112111111222334567789999999
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhcccc
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFE 455 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pe 455 (478)
|+...+..+....+++.++|.+.+.+.+..++...+.+.+++.++..+..++++|+
T Consensus 128 ~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (401)
T PRK11043 128 ANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPS 183 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999998888889999999988877776666666666666666665555555444
No 158
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.78 E-value=2.7e-07 Score=89.93 Aligned_cols=130 Identities=22% Similarity=0.176 Sum_probs=88.0
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
....++..++.+..|+++||+|||+.+..+.....+..+......+.+.................+....+..|.+|++.
T Consensus 41 ~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~ 120 (352)
T cd06174 41 SAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE 120 (352)
T ss_pred HHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc
Confidence 44456678889999999999999998887776665544443333222222222222222222334566889999999999
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHH
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVI 449 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~ 449 (478)
|+++.++.+....+|+.++|.+.+.+.+..++...+.+.+.+.++..+..
T Consensus 121 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (352)
T cd06174 121 RGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLL 170 (352)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988877765544455555555544444433
No 159
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.78 E-value=5.9e-07 Score=89.73 Aligned_cols=132 Identities=10% Similarity=-0.060 Sum_probs=84.7
Q ss_pred HHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChh
Q 011756 321 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 400 (478)
Q Consensus 321 ~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R 400 (478)
...+.......+.|+++||+|||+++..+..+..+..+......+. ....+..........+....+.+|.+|.+.|
T Consensus 46 ~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~ 122 (393)
T PRK11195 46 FFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKL 122 (393)
T ss_pred HHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 3345667778899999999999999888766554433322222111 1111222223333456678899999999999
Q ss_pred HHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 401 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 401 ~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
+++.|+......++..++|.+.+.+.+.. ....+.+.+.+.+++ .+..+..||.+
T Consensus 123 ~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~-~~~~~~l~~~~ 177 (393)
T PRK11195 123 VKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLA-ALFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH-HHHHhcCCCCc
Confidence 99999999999999999999988776642 233333333333333 33345566654
No 160
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.77 E-value=3.3e-07 Score=93.93 Aligned_cols=110 Identities=13% Similarity=0.019 Sum_probs=72.0
Q ss_pred hHHHHHHHHHhh-hchHHHHHHHHHHHHHHHHHHHhhch-hHHHHHHHHHHHHHhhhhhhhhhhhcccccCcC--hhHHH
Q 011756 328 PGLLTAALLVDR-VGRKLSMTIMFIFVCIFLLPLVTLQS-NILLTALLSGARMFSMGTFIIANIFAPEIYPTS--MRSTG 403 (478)
Q Consensus 328 ~g~~~~~~l~dr-~GRr~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~--~R~~~ 403 (478)
...+++|+++|| +|||+.+..+..+..+..+......+ ...................+......+|.||++ .|+.+
T Consensus 65 ~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~ 144 (489)
T PRK10207 65 GLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGA 144 (489)
T ss_pred HHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcc
Confidence 345689999999 99999999887666554443333222 111111111221111122344567889999987 45888
Q ss_pred HHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHH
Q 011756 404 AGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILL 437 (478)
Q Consensus 404 ~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~ 437 (478)
.++.+...++|+.++|.+.+.+.+..++...|++
T Consensus 145 ~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i 178 (489)
T PRK10207 145 FTLFYMSINIGSLISLSLAPVIADKFGYSVTYNL 178 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHH
Confidence 9999999999999999988888776665555555
No 161
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.74 E-value=1.9e-07 Score=95.21 Aligned_cols=128 Identities=15% Similarity=0.135 Sum_probs=94.3
Q ss_pred HHhhhhhcCCCcchhhHHHHHHHHHHHH-------------------HHH--HHHHHHHHHHHHhhhchHHHHHHHHHHh
Q 011756 50 GPAVKSEWGLSSSEESLITTVVFAGMMS-------------------ILG--GALVTFVAGLLSAFSPNYISLLILRGLA 108 (478)
Q Consensus 50 ~~~~~~~~~l~~~~~~~~~s~~~~G~~~-------------------~~~--~~~~~~i~~~~~~~a~~~~~l~~~R~l~ 108 (478)
.|...++.++++.+.+++.+...++.+. ... +.+...++.++...++|++.+++.+++.
T Consensus 264 l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~ 343 (455)
T TIGR00892 264 LVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFF 343 (455)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 3444566899999988888776544332 011 1111122233445678899999999999
Q ss_pred hcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCc-chHHHHHHhhHHHHHHH
Q 011756 109 GAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPIL-TWRWLLALSAIPAFVLL 177 (478)
Q Consensus 109 Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~-~WR~~f~i~~i~~~l~~ 177 (478)
|++.|... ...+++.|..|+++||+..++.+....+|.++++.+++.+.+.. +|++.|.+.++..++..
T Consensus 344 G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~ 414 (455)
T TIGR00892 344 GLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAG 414 (455)
T ss_pred HHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHH
Confidence 99887753 45677889999999999999999999999999999998887766 59999998887655443
No 162
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.73 E-value=2e-07 Score=96.83 Aligned_cols=134 Identities=17% Similarity=0.188 Sum_probs=100.7
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
.+..++.++|.++.|+++||+|||+++..+.++..++.+...+..+.....++-++.+++..+.....+.+.+|+++++.
T Consensus 125 s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~ 204 (521)
T KOG0255|consen 125 SLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ 204 (521)
T ss_pred HHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcch
Confidence 44456778899999999999999999999888777776665665555555555566666677778888999999999999
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
|+.+..+ ..+.+.++.+.|....++.. ++...+++......+..+. ++++||++
T Consensus 205 R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~ 258 (521)
T KOG0255|consen 205 RGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESP 258 (521)
T ss_pred hhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcCh
Confidence 9999999 88888889888888777765 3444444444444444333 66666766
No 163
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.72 E-value=1.3e-06 Score=89.67 Aligned_cols=132 Identities=20% Similarity=0.113 Sum_probs=86.4
Q ss_pred hhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---hh--chhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcC
Q 011756 324 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---TL--QSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 398 (478)
Q Consensus 324 ~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~ 398 (478)
+-.+.-.+.+|.++||+.||++++.+-.+.++....+. .. .+.+...++.+....+.....+......+|+.|.+
T Consensus 56 LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~ 135 (524)
T PF05977_consen 56 LPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKE 135 (524)
T ss_pred HHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHh
Confidence 33455567899999999999998877655433222211 11 12233233323332222233455678999999999
Q ss_pred hhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhcccc
Q 011756 399 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFE 455 (478)
Q Consensus 399 ~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pe 455 (478)
....++++.....++...++|.+.+.++...+....+.+-+.+.++..+....+.++
T Consensus 136 ~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~ 192 (524)
T PF05977_consen 136 DLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPP 192 (524)
T ss_pred hHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 999999999999999999999998888776666566666555555554444444443
No 164
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.72 E-value=2.8e-07 Score=94.00 Aligned_cols=138 Identities=20% Similarity=0.089 Sum_probs=86.0
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhc---hhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 011756 319 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ---SNILLTALLSGARMFSMGTFIIANIFAPEIY 395 (478)
Q Consensus 319 ~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~ 395 (478)
.....++..++.+..|+++||+|||+.+..+..+..+..+...... +.+......+...+.....++....+.+|.+
T Consensus 77 ~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~ 156 (481)
T TIGR00879 77 VSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIA 156 (481)
T ss_pred HHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccC
Confidence 3455567788999999999999999998877655544333322211 1111222222222222233455678899999
Q ss_pred CcChhHHHHHHHHHHHhHhHhHHHHHH---HHHhhccchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 396 PTSMRSTGAGVAYAVGRIGGMVCPLVA---VGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 396 p~~~R~~~~g~~~~~~~lg~~~~p~~~---~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
|.+.|+++.++.+....+|..++|.+. .......++...+.+.+...++. ++..++.||+.
T Consensus 157 ~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~-~~~~~~l~~~~ 220 (481)
T TIGR00879 157 PKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLL-FLGLFFLPESP 220 (481)
T ss_pred ChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHH-HHHHhcCCCCh
Confidence 999999999999999999999999876 32223334444555533333333 34445567764
No 165
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.70 E-value=1.8e-07 Score=90.13 Aligned_cols=141 Identities=17% Similarity=0.133 Sum_probs=105.6
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
....+.+-++-.+.|.++||.+.|+.+..+.++++++.+.+.+..+..+..++......+-...++.+....+.-||++.
T Consensus 71 s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e 150 (448)
T COG2271 71 SAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE 150 (448)
T ss_pred HHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc
Confidence 44456677888999999999999999999999998888777765544444444544444333346778889999999999
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHH--HHHhhccchhHHHHHHHHHHHHHHHHHHhcc---ccccCcc
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVA--VGLVTSCHQTAAILLLEALIVLSVVVILLIP---FETKGKE 460 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~--~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~---pet~g~~ 460 (478)
||+-.++-|...++|+.+.|.+. ..+..+.++...|++-++++++..++.++.. ||+.|.+
T Consensus 151 RG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP 216 (448)
T COG2271 151 RGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLP 216 (448)
T ss_pred cCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCC
Confidence 99999999999999999998887 5555554556677777777766666666654 5555644
No 166
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.70 E-value=6.9e-07 Score=90.01 Aligned_cols=137 Identities=15% Similarity=0.088 Sum_probs=84.3
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---h-hchh-HHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---T-LQSN-ILLTALLSGARMFSMGTFIIANIFAPEI 394 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~---~-~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~E~ 394 (478)
....++.+++.+..|+++||+|||+.+..+..+.++..+... . ..+. +......+..........+....+.+|.
T Consensus 59 ~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~ 138 (417)
T PRK10489 59 TLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPAL 138 (417)
T ss_pred HHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Confidence 444566778889999999999999987765544443222211 1 1111 2111111222111111234456778899
Q ss_pred cCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 395 YPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 395 ~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
.|.+.|+++.++.+....+|..++|.+.+.+.+..++.+.+.+.++..++..+. .+..||++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~ 200 (417)
T PRK10489 139 VGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLP-LLRLPALP 200 (417)
T ss_pred cCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhCCCCC
Confidence 999999999999999999999999998887766555555555555544444443 33445543
No 167
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.70 E-value=7.6e-07 Score=91.40 Aligned_cols=138 Identities=14% Similarity=0.050 Sum_probs=85.6
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh---------chhHHH---HHHHHHHHHHhhhhhhh
Q 011756 319 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL---------QSNILL---TALLSGARMFSMGTFII 386 (478)
Q Consensus 319 ~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~---------~~~~~~---~~~~~~~~~~~~g~~~~ 386 (478)
.....++...+.++.|+++||+|||+++..+..+..+..+..... .+.... .+.-+...+...+.++.
T Consensus 61 ~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~ 140 (479)
T PRK10077 61 VASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASML 140 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhH
Confidence 344557778899999999999999999887765544333222210 111111 11112222333344566
Q ss_pred hhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHh--------hccchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 387 ANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV--------TSCHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 387 ~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~--------~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
...+.+|.+|.+.|+++.|+......+|..+++.+...+. ...++...+++.+++.++.. +..++.||+.
T Consensus 141 ~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~-~~~~~l~~s~ 218 (479)
T PRK10077 141 SPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFL-MLLYFVPETP 218 (479)
T ss_pred HHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHH-HHHHcCCCCc
Confidence 7889999999999999999998888888888776544332 12234455555555555544 3355568875
No 168
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.70 E-value=8e-07 Score=88.81 Aligned_cols=133 Identities=14% Similarity=0.120 Sum_probs=95.9
Q ss_pred hhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCc
Q 011756 52 AVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGS 114 (478)
Q Consensus 52 ~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~ 114 (478)
.+++++++++.+.+++.+...++.+. +..+.....+.......++++..+++.|++.+++.|.
T Consensus 242 ~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~ 321 (393)
T PRK15011 242 FIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGI 321 (393)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 45677899988888876654332211 1222222222222334567788888899998887665
Q ss_pred h-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHHHHHHhcCC
Q 011756 115 G-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPE 185 (478)
Q Consensus 115 ~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~l~~~~~~~lpE 185 (478)
. .....+..|..|+ +||+.+++++....+|..+++.++..+.++.||+..|.+.+++.++.++..+++||
T Consensus 322 ~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 322 LGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 4 2344567899885 59999999999999999999999998888889999999988888877777777765
No 169
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.70 E-value=1.6e-06 Score=86.27 Aligned_cols=109 Identities=14% Similarity=-0.014 Sum_probs=72.1
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcC
Q 011756 319 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 398 (478)
Q Consensus 319 ~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~ 398 (478)
.....++...+.+..++++||+|||+.+..+.....+.........+.+...+..+..........+.......+..|.+
T Consensus 47 ~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 126 (381)
T PRK03633 47 SSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSR 126 (381)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 34445677888999999999999999888877665554443333333222222222222222222333344556788889
Q ss_pred hhHHHHHHHHHHHhHhHhHHHHHHHHHhh
Q 011756 399 MRSTGAGVAYAVGRIGGMVCPLVAVGLVT 427 (478)
Q Consensus 399 ~R~~~~g~~~~~~~lg~~~~p~~~~~l~~ 427 (478)
.|+++.+..+....+|..++|.+.+.+.+
T Consensus 127 ~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 155 (381)
T PRK03633 127 NRGRLLAAYMMVYYLGTVLGQLLVSKVST 155 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999999999998776544
No 170
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.69 E-value=2.8e-09 Score=109.53 Aligned_cols=150 Identities=20% Similarity=0.257 Sum_probs=2.7
Q ss_pred HHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHH--------
Q 011756 37 FSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLL-------- 91 (478)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~-------- 91 (478)
+.++.-......+.+++++.|++++++.|++.+.+-+|..+ +-.+.++..+++++
T Consensus 13 ~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~ 92 (539)
T PF03137_consen 13 LFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLS 92 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhc
Confidence 44466666666778899999999999999999988655333 11111111111110
Q ss_pred ---------------------H-------------------h--hhchHHHHHHHHHHhhcccCchh-hHHHHHhhccCC
Q 011756 92 ---------------------S-------------------A--FSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPP 128 (478)
Q Consensus 92 ---------------------~-------------------~--~a~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~ 128 (478)
+ . ...-+..++++.++.|+|....+ ...+|+-|.+++
T Consensus 93 ~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~ 172 (539)
T PF03137_consen 93 GPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSK 172 (539)
T ss_dssp -----------------------------------------------------------SSS------------------
T ss_pred CCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccccc
Confidence 0 0 00114568999999998887654 567899999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhcC------------------c----chHHHHHHhhHHHHHHHHHHHhcCCC
Q 011756 129 SNRGKWMVVFSTFWTFGSVSEAALAWIVMPI------------------L----TWRWLLALSAIPAFVLLIFIVFMPES 186 (478)
Q Consensus 129 ~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~------------------~----~WR~~f~i~~i~~~l~~~~~~~lpES 186 (478)
|.-+...|+......+|+.+|.+++...+.. - .|..-|.+.++..++..+...++|..
T Consensus 173 ~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~ 252 (539)
T PF03137_consen 173 KNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKK 252 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 9999999999999999999888887653210 0 25555665565555555555556654
No 171
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.69 E-value=3.9e-06 Score=84.36 Aligned_cols=136 Identities=12% Similarity=0.057 Sum_probs=83.7
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh-----chhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL-----QSNILLTALLSGARMFSMGTFIIANIFAPEI 394 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~ 394 (478)
.+..+...+..+..|++.||+|.|+++..+..+.++..+..... .+......+-+...+ ..+.++......++.
T Consensus 77 ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gi-gg~~f~~~~~~vs~w 155 (462)
T PRK15034 77 ALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGF-AGANFASSMGNISFF 155 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHH-HHHhHHHHHHHHHHH
Confidence 33445555666778999999999998887776655444433322 122222222222222 233456667788999
Q ss_pred cCcChhHHHHHHHHHHHhHhHhHHHHHHHHHh-----hcc-------------chhHHHHHHHHHHHHHHHHHHhccccc
Q 011756 395 YPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV-----TSC-------------HQTAAILLLEALIVLSVVVILLIPFET 456 (478)
Q Consensus 395 ~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~-----~~~-------------~~~~~~~~~~~~~~i~~~~~~~~~pet 456 (478)
||++.||++.|+....+++|..+++.+.+.+. ... +......+++.+.++..+..++..++.
T Consensus 156 fp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~ 235 (462)
T PRK15034 156 FPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDI 235 (462)
T ss_pred CCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999999999998888888877766655433 111 122334566666666666666655543
No 172
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.69 E-value=2.2e-06 Score=83.37 Aligned_cols=137 Identities=15% Similarity=0.085 Sum_probs=99.7
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCc
Q 011756 318 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPT 397 (478)
Q Consensus 318 ~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~ 397 (478)
.....+++..++..+...+.||+.||+.++....+..+..+......+.....+-=....+.....++......+++.|+
T Consensus 53 lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp 132 (394)
T COG2814 53 LITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPP 132 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 34556677788889999999999999998876655554444333322222221111122222234566778899999999
Q ss_pred ChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccc
Q 011756 398 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPF 454 (478)
Q Consensus 398 ~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~p 454 (478)
+.|+++.++...--.++..++..+...+-+..++..+|+..+++.++..+..+...|
T Consensus 133 ~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 133 GKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred cchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999998888888888777776767677888999999999999888888888
No 173
>TIGR00898 2A0119 cation transport protein.
Probab=98.68 E-value=4.3e-07 Score=93.90 Aligned_cols=134 Identities=16% Similarity=0.099 Sum_probs=89.4
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
.+..++.++|.++.|+++||+|||+.+..+..+.++..+......+.+...+..++..+...+..+..+.+.+|.+|.+.
T Consensus 134 s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~ 213 (505)
T TIGR00898 134 SCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ 213 (505)
T ss_pred HHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheecChhh
Confidence 44556778899999999999999999888776665554444433333333333333333333446677899999999999
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
|+.+.++......+|.+++|.+...+ . ++...+++.+...++..+.. ++.||+.
T Consensus 214 r~~~~~~~~~~~~~g~~~~~~~~~~~-~--~wr~~~~~~~i~~~~~~~~~-~~~~esp 267 (505)
T TIGR00898 214 RAIVGTLIQVFFSLGLVLLPLVAYFI-P--DWRWLQLAVSLPTFLFFLLS-WFVPESP 267 (505)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh-h--HHHHHHHHHHHHHHHHHHHH-HhcCCCh
Confidence 99999998777778888888765433 2 24455556665555555444 5567753
No 174
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.67 E-value=1.5e-06 Score=89.49 Aligned_cols=115 Identities=13% Similarity=0.067 Sum_probs=71.4
Q ss_pred HHHHHHHHhh-hchHHHHHHHHHHHHHHHHHHHhhchh-HHHHHHHHHHHHHhhh-hhhhhhhhcccccCcCh--hHHHH
Q 011756 330 LLTAALLVDR-VGRKLSMTIMFIFVCIFLLPLVTLQSN-ILLTALLSGARMFSMG-TFIIANIFAPEIYPTSM--RSTGA 404 (478)
Q Consensus 330 ~~~~~~l~dr-~GRr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g-~~~~~~~~~~E~~p~~~--R~~~~ 404 (478)
.+++|+++|| +|||+.+..+..+.++.........+. .......... ....| ..+....+.+|.+|.+. |..+.
T Consensus 74 ~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~-gig~g~~~~~~~~l~~~~f~~~~~~~~~~~ 152 (500)
T PRK09584 74 VAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATI-AVGNGLFKANPSSLLSTCYEKDDPRLDGAF 152 (500)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH-HHhhhcccCCHHHHHHHhcCCCchhhhhcc
Confidence 3578999999 599999888776555443333332211 1111111111 12222 23345678889998643 45678
Q ss_pred HHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHH
Q 011756 405 GVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLS 445 (478)
Q Consensus 405 g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~ 445 (478)
++.+...++|+.++|.+.+.+.+..++...|.+.++...++
T Consensus 153 ~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~ 193 (500)
T PRK09584 153 TMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLIT 193 (500)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Confidence 88889999999999999988877666555665544433343
No 175
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.67 E-value=2.5e-06 Score=86.44 Aligned_cols=134 Identities=20% Similarity=0.125 Sum_probs=78.6
Q ss_pred hhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchh--------HHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 011756 324 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSN--------ILLTALLSGARMFSMGTFIIANIFAPEIY 395 (478)
Q Consensus 324 ~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~g~~~~~~~~~~E~~ 395 (478)
++..+|.+++|+++||+|||+.+..+....++..+...+..+. ......-+...+...+.++....+.+|.+
T Consensus 74 ~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~ 153 (432)
T PRK10406 74 LMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVA 153 (432)
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhC
Confidence 4456899999999999999999888776665544443332111 01111112222222334567788999999
Q ss_pred CcChhHHHHHHHHHHHhHhHhHHHHHHHHHh--------hccchhHHHHHHHHHHHHHHHHHHhccccccC
Q 011756 396 PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV--------TSCHQTAAILLLEALIVLSVVVILLIPFETKG 458 (478)
Q Consensus 396 p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~--------~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g 458 (478)
|++.|+...++.......|..+++.+...+. ...++...|.+.++..++. ++.....||++.
T Consensus 154 p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~-~~~~~~~~e~~~ 223 (432)
T PRK10406 154 VEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA-LWLRRQLDETSQ 223 (432)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH-HHHHhcCCCCch
Confidence 9999999988876655566666655433221 1234444555444433333 233334567643
No 176
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.67 E-value=1.8e-07 Score=95.62 Aligned_cols=136 Identities=10% Similarity=0.016 Sum_probs=91.7
Q ss_pred HHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh--chhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcC
Q 011756 321 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL--QSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 398 (478)
Q Consensus 321 ~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~ 398 (478)
...++..++.+.+|+++||+|||+.+..+..+.++..+..... .+.....+.-+...+.....++....+.+|.+|++
T Consensus 84 ~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~ 163 (465)
T TIGR00894 84 SHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPK 163 (465)
T ss_pred HHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHH
Confidence 3446678888999999999999998887766555443332211 11111222222222222334456678999999999
Q ss_pred hhHHHHHHHHHHHhHhHhHHHHHHHHHhhc-cchhHHHHHHHHHHHHHHHHHHhccccc
Q 011756 399 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTS-CHQTAAILLLEALIVLSVVVILLIPFET 456 (478)
Q Consensus 399 ~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~-~~~~~~~~~~~~~~~i~~~~~~~~~pet 456 (478)
.|+++.|+......+|..++|.+.+.+.+. .++...+.+.+++.++..++.+++++|.
T Consensus 164 ~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~ 222 (465)
T TIGR00894 164 ERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADD 222 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999988877766 3555667776666665555555555543
No 177
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.63 E-value=1.8e-06 Score=86.54 Aligned_cols=112 Identities=11% Similarity=0.017 Sum_probs=69.9
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---hhc-hhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 011756 319 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---TLQ-SNILLTALLSGARMFSMGTFIIANIFAPEI 394 (478)
Q Consensus 319 ~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~ 394 (478)
.....++..++.++.|.+.||+|||+.+..+..+.++..+... ... +........................+..|.
T Consensus 54 ~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~ 133 (402)
T TIGR00897 54 FTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYN 133 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHh
Confidence 3455567788899999999999999998877665544332211 111 111111111111111111222334566788
Q ss_pred cCcChhHHHHHHHHHHHhHhH-hHHHHHHHHHhhccc
Q 011756 395 YPTSMRSTGAGVAYAVGRIGG-MVCPLVAVGLVTSCH 430 (478)
Q Consensus 395 ~p~~~R~~~~g~~~~~~~lg~-~~~p~~~~~l~~~~~ 430 (478)
+|++.|+++.|+.+....+|. .++|.+.+.+.+..+
T Consensus 134 ~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g 170 (402)
T TIGR00897 134 TKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG 170 (402)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 999999999999999988885 578877666655444
No 178
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.63 E-value=2.2e-05 Score=79.19 Aligned_cols=138 Identities=18% Similarity=0.197 Sum_probs=90.8
Q ss_pred HhHHhhhhhcCCCcchhhHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHhh----hchHHHHH
Q 011756 48 FVGPAVKSEWGLSSSEESLITTVVFAGMMS---------------------ILGGALVTFVAGLLSAF----SPNYISLL 102 (478)
Q Consensus 48 ~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~---------------------~~~~~~~~~i~~~~~~~----a~~~~~l~ 102 (478)
-..|.+++++++++.+...+.+...+...+ ++++.++..++.+..+. ..+.....
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~ 90 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAV 90 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHH
Confidence 345778999999999988887776543322 44444444333333332 23455555
Q ss_pred HHHHHhhcccCch-hhHHHHHhhccCC--CCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHHH-
Q 011756 103 ILRGLAGAGLGSG-HVFFSWFMEFVPP--SNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLI- 178 (478)
Q Consensus 103 ~~R~l~Gig~g~~-~~~~~~~~E~~p~--~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~l~~~- 178 (478)
+.=++..+|.... .+.-..+.|...+ +.||...+.......+|.+++..+++.+.+..++|+.|.+.++...+..+
T Consensus 91 ~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~ 170 (433)
T PF03092_consen 91 VLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIV 170 (433)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHH
Confidence 5556666665543 3344566777633 34788888888888899999999988888888999999888765555544
Q ss_pred HHHhcCC
Q 011756 179 FIVFMPE 185 (478)
Q Consensus 179 ~~~~lpE 185 (478)
.....+|
T Consensus 171 ~~~~~~e 177 (433)
T PF03092_consen 171 ALFLLEE 177 (433)
T ss_pred HHHhhhh
Confidence 4444555
No 179
>PRK15075 citrate-proton symporter; Provisional
Probab=98.62 E-value=3.3e-06 Score=85.59 Aligned_cols=98 Identities=11% Similarity=0.046 Sum_probs=64.3
Q ss_pred hhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHH--------HHHHHHHHHHHhhhhhhhhhhhcccccCcC
Q 011756 327 LPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNIL--------LTALLSGARMFSMGTFIIANIFAPEIYPTS 398 (478)
Q Consensus 327 ~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~ 398 (478)
.+|.+..|+++||+|||+.+..+..+.++.........+... ..+.-+...+...+.++....+.+|.+|++
T Consensus 70 ~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~ 149 (434)
T PRK15075 70 PLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPG 149 (434)
T ss_pred hhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcc
Confidence 467889999999999999998877665554444433322211 111111111111123445568899999999
Q ss_pred hhHHHHHHHHHHHhHhHhHHHHHHHH
Q 011756 399 MRSTGAGVAYAVGRIGGMVCPLVAVG 424 (478)
Q Consensus 399 ~R~~~~g~~~~~~~lg~~~~p~~~~~ 424 (478)
.|+++.++.....+++..+++.+...
T Consensus 150 ~rg~~~~~~~~~~~~g~~~g~~~g~~ 175 (434)
T PRK15075 150 RKGFYTSWQSASQQVAVVFAALLGYL 175 (434)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888877777665443
No 180
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.61 E-value=2.3e-06 Score=85.58 Aligned_cols=118 Identities=12% Similarity=-0.125 Sum_probs=73.0
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh--hchh---H---HHHHHHHHHHHHhhhhhhhhhhhc
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT--LQSN---I---LLTALLSGARMFSMGTFIIANIFA 391 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~--~~~~---~---~~~~~~~~~~~~~~g~~~~~~~~~ 391 (478)
....+...++.+..|+++||+|||+++..+..+.++..+.... ..+. . .....-+..........+....+.
T Consensus 58 ~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~ 137 (399)
T PRK05122 58 SLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWG 137 (399)
T ss_pred HHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHH
Confidence 3444666778889999999999999988876654433222111 1111 0 111111111111112233445677
Q ss_pred ccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHH
Q 011756 392 PEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILL 437 (478)
Q Consensus 392 ~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~ 437 (478)
.|.+|.+.|+++.++......+|..++|.+.+.+.+..++...+.+
T Consensus 138 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~ 183 (399)
T PRK05122 138 IGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLL 183 (399)
T ss_pred HhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 8999999999999998888888888888887777665554433333
No 181
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.60 E-value=4.2e-07 Score=93.04 Aligned_cols=134 Identities=16% Similarity=0.031 Sum_probs=82.7
Q ss_pred HHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh-----hchhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 011756 321 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-----LQSNILLTALLSGARMFSMGTFIIANIFAPEIY 395 (478)
Q Consensus 321 ~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~ 395 (478)
...++..++.+..|+++||+|||+++..+.++.++..+.... ..+............+.....++....+.+|.+
T Consensus 72 ~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 151 (467)
T PRK09556 72 GFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWT 151 (467)
T ss_pred HHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHc
Confidence 345667788899999999999999987776555443332221 122222222222222222223455677899999
Q ss_pred CcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhcc---chhHHHHHHHHHHHHHHHHHHhccc
Q 011756 396 PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC---HQTAAILLLEALIVLSVVVILLIPF 454 (478)
Q Consensus 396 p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~---~~~~~~~~~~~~~~i~~~~~~~~~p 454 (478)
|++.|+++.|+....+.+|+.+++.+...+.... ++...+.+.+.+.++..+..+++.+
T Consensus 152 ~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~ 213 (467)
T PRK09556 152 PRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGS 213 (467)
T ss_pred CccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999887765544332 1223344445554444444444433
No 182
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.59 E-value=3.6e-06 Score=83.25 Aligned_cols=136 Identities=16% Similarity=0.051 Sum_probs=81.5
Q ss_pred HHhhhhhHHHHHHHHHhhhchHHHHHH-HHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChh
Q 011756 322 TSFAELPGLLTAALLVDRVGRKLSMTI-MFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 400 (478)
Q Consensus 322 ~~~~~~~g~~~~~~l~dr~GRr~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R 400 (478)
..+...+.....|.++||+|||+.+.. +.....+..+......+.+.................+....+..|..|.+.|
T Consensus 42 ~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~ 121 (375)
T TIGR00899 42 SAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGR 121 (375)
T ss_pred HHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcch
Confidence 334556667788999999999886544 3333333222223222222211111111111122334445667788887777
Q ss_pred HHH--HHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 401 STG--AGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 401 ~~~--~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
+.+ .+.....+.+|..++|.+.+.+.+..++...+.+.+.+.++..+..+++.||.+
T Consensus 122 ~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 180 (375)
T TIGR00899 122 EAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYP 180 (375)
T ss_pred hhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 755 577777778899999988877766656666777777776766666666667654
No 183
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.57 E-value=0.00013 Score=71.64 Aligned_cols=168 Identities=15% Similarity=0.227 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhh-cCCCcchhh----------HHHHHHHHHHHH--------HHHHHHH
Q 011756 24 FQGLALAYSGLGWFSEAMEVMILSFVGPAVKSE-WGLSSSEES----------LITTVVFAGMMS--------ILGGALV 84 (478)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~----------~~~s~~~~G~~~--------~~~~~~~ 84 (478)
+....++.|.+|.+.+- . -.-.|..|.+..+ .|+|.+|.. .+..+..+...- ++...+.
T Consensus 3 w~~~~~llc~~gf~~~f-r-PsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~ 80 (412)
T PF01770_consen 3 WKKITLLLCLFGFFKEF-R-PSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALS 80 (412)
T ss_pred chHHHHHHHHHHHHHhc-C-CCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 34456667777754442 1 1223455555554 577776642 122221111111 3334444
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHhhcccCchhhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhc--Ccch
Q 011756 85 TFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP--ILTW 162 (478)
Q Consensus 85 ~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~--~~~W 162 (478)
..+...+.-+.++...+-+.-+.-|++.+...+.++|+--..|+++-.++.+......-+|..++++++..+.. ..+.
T Consensus 81 ~i~t~~lll~~~sv~~mq~~q~~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy 160 (412)
T PF01770_consen 81 YIITWLLLLFGTSVLAMQLMQFFYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSY 160 (412)
T ss_pred HHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 44445556678999999999999999888877777887777788888999999999999999999998887654 4467
Q ss_pred HHHHHHhhHHHHHHHHHHHhcCCCchhhhhc
Q 011756 163 RWLLALSAIPAFVLLIFIVFMPESPRYLCTK 193 (478)
Q Consensus 163 R~~f~i~~i~~~l~~~~~~~lpESP~~l~~~ 193 (478)
+.+..+......+.++..+++|-.++=+--|
T Consensus 161 ~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~ 191 (412)
T PF01770_consen 161 FQLNYISLASVSLALLIALFLPMPKRSLFFH 191 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCccccee
Confidence 7777776665555666777888766533333
No 184
>PRK09952 shikimate transporter; Provisional
Probab=98.56 E-value=5.8e-06 Score=83.89 Aligned_cols=133 Identities=17% Similarity=0.061 Sum_probs=79.6
Q ss_pred hhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhH--------HHHHHHHHHHHHhhhhhhhhhhhccccc
Q 011756 324 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNI--------LLTALLSGARMFSMGTFIIANIFAPEIY 395 (478)
Q Consensus 324 ~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~g~~~~~~~~~~E~~ 395 (478)
++..+|.++.|+++||+|||+.+..+..+.++..+...+..+.. .....-+...+...+.++....+.+|.+
T Consensus 75 ~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~ 154 (438)
T PRK09952 75 LFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESA 154 (438)
T ss_pred HHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhC
Confidence 44667889999999999999999887766665544444322211 0111112222222334455678899999
Q ss_pred CcChhHHHHHHHHHHHhHhHhHHHHHHHHHhh--------ccchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 396 PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT--------SCHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 396 p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
|.+.|+...+.......+|..+++.+...+.. ..++...|++.+...++ .+.....+||++
T Consensus 155 p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~-~~~l~~~~~es~ 223 (438)
T PRK09952 155 PKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI-ALWVRNGMEESA 223 (438)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH-HHHHHHhCCCCh
Confidence 99999999888877777777777655443321 22344455444433322 222333457764
No 185
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.55 E-value=2.5e-07 Score=87.69 Aligned_cols=135 Identities=17% Similarity=0.099 Sum_probs=88.9
Q ss_pred HHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhH
Q 011756 322 TSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRS 401 (478)
Q Consensus 322 ~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~ 401 (478)
.+++.++.+...|.++||.|||+++.+|....+++....+...+-.. .+..=...+...|-.++.-++.+|+++.+.|+
T Consensus 77 F~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~a-fv~aR~l~Gi~kgnl~v~rAiisdV~sek~r~ 155 (451)
T KOG2615|consen 77 FSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAA-FVLARFLGGIFKGNLSVIRAIISDVVSEKYRP 155 (451)
T ss_pred HHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhhccCchHHHHHHHHhhcChhhcc
Confidence 34667888899999999999999999988777765554443322111 11100111223455567889999999999999
Q ss_pred HHHHHHHHHHhHhHhHHHHHHHHHhh---ccchhHHHH--HHHHHHHHH-HHHHHhcccccc
Q 011756 402 TGAGVAYAVGRIGGMVCPLVAVGLVT---SCHQTAAIL--LLEALIVLS-VVVILLIPFETK 457 (478)
Q Consensus 402 ~~~g~~~~~~~lg~~~~p~~~~~l~~---~~~~~~~~~--~~~~~~~i~-~~~~~~~~pet~ 457 (478)
.+++..+....+|-+++|.+.+++-. ..+.+..++ ++..+...+ .....++.|||-
T Consensus 156 l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL 217 (451)
T KOG2615|consen 156 LGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETL 217 (451)
T ss_pred ceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 99999999999999999998877654 222211111 222222333 445556778985
No 186
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.55 E-value=1.8e-06 Score=87.05 Aligned_cols=89 Identities=19% Similarity=0.223 Sum_probs=71.9
Q ss_pred HHHHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHH-HHHHHHHHHHHHHHHHHhcC------cchHHHHHHh
Q 011756 98 YISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFS-TFWTFGSVSEAALAWIVMPI------LTWRWLLALS 169 (478)
Q Consensus 98 ~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~-~~~~~G~~~~~~~~~~~~~~------~~WR~~f~i~ 169 (478)
+..+++.+++.|++.+... ....++.|.+|+++||+..++.+ ..+.+|..++|.+++.+.++ +|||..|.+.
T Consensus 308 ~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~ 387 (418)
T TIGR00889 308 YALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFF 387 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHH
Confidence 4677889999999887653 44567899999999999999997 57889999999999887665 5799999888
Q ss_pred hHHHHHH-HHHHHhcCCC
Q 011756 170 AIPAFVL-LIFIVFMPES 186 (478)
Q Consensus 170 ~i~~~l~-~~~~~~lpES 186 (478)
++..++. ++..+++||+
T Consensus 388 ~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 388 AGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHHhCCc
Confidence 7766655 4455667887
No 187
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.53 E-value=1.1e-05 Score=80.99 Aligned_cols=108 Identities=13% Similarity=0.023 Sum_probs=72.2
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh---hchhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 011756 319 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT---LQSNILLTALLSGARMFSMGTFIIANIFAPEIY 395 (478)
Q Consensus 319 ~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~ 395 (478)
.....++..++.+..+++.||+|||+.+..+..+.++..+.... ..+.+......+.............+.+..|..
T Consensus 44 ~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~ 123 (410)
T TIGR00885 44 QSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMG 123 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHC
Confidence 34455677888899999999999999998887665544333221 111111111122222212222344566777889
Q ss_pred CcChhHHHHHHHHHHHhHhHhHHHHHHHHHh
Q 011756 396 PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV 426 (478)
Q Consensus 396 p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~ 426 (478)
|.+.|++..++.+.+..+|+.++|.+...+.
T Consensus 124 ~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 124 PESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998887664
No 188
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.52 E-value=4.1e-06 Score=83.73 Aligned_cols=124 Identities=12% Similarity=-0.022 Sum_probs=80.5
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
....++...+.+..++++||+|||+++..+..+.++..+...+..+.......-+...+...........+..|.+| +.
T Consensus 51 s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~ 129 (393)
T PRK09705 51 ALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR 129 (393)
T ss_pred HHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc
Confidence 34445677788999999999999999999887777666555544333322222222222222223444567788887 77
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHhhcc-chhHHHHHHHHHHHH
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSC-HQTAAILLLEALIVL 444 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~-~~~~~~~~~~~~~~i 444 (478)
|+.+.|+.......|+.+++.+.+.+.+.. ++...+.+++...++
T Consensus 130 ~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~ 175 (393)
T PRK09705 130 TPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVV 175 (393)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 999999998888888888888777666543 344444444444333
No 189
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.50 E-value=8.5e-06 Score=92.88 Aligned_cols=135 Identities=15% Similarity=-0.065 Sum_probs=82.4
Q ss_pred HHhhhhhHHHHHHHHHhhhchHHHHHHHHH---HHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcC
Q 011756 322 TSFAELPGLLTAALLVDRVGRKLSMTIMFI---FVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 398 (478)
Q Consensus 322 ~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~ 398 (478)
..+..++...++|+++||+|||+++..... +.+...+......+.+...++.++.........+....+..|.+|.+
T Consensus 61 ~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~ 140 (1140)
T PRK06814 61 FILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKD 140 (1140)
T ss_pred HHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCcc
Confidence 345556778889999999999997643221 11111111111122232233333333333344566788999999999
Q ss_pred hhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 399 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 399 ~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
.|+.++|+.+....+|..++|.+.+.+....++...+ +..+...+..++..+..|+++
T Consensus 141 ~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 198 (1140)
T PRK06814 141 ELLGANALVEAGTFIAILLGTIIGGLATISGNFVILV-ALLMGIAVLGWLASLFIPKTG 198 (1140)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHH-HHHHHHHHHHHHHHhhCCCCC
Confidence 9999999999999999999999998887765544444 333332333333344445543
No 190
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.49 E-value=1.1e-05 Score=78.08 Aligned_cols=137 Identities=18% Similarity=0.125 Sum_probs=89.5
Q ss_pred hHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh--hchhHHHHHHHH-HHHHHhhhhhhhhhhhc
Q 011756 315 VYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT--LQSNILLTALLS-GARMFSMGTFIIANIFA 391 (478)
Q Consensus 315 ~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~ 391 (478)
......+..+...+--+.-+++.||+|-|+....+..+..+-.+.... .+... ...+.+ ......-+.+.+...+.
T Consensus 51 ~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~-~~ll~~gll~G~~GasFav~m~~~ 129 (417)
T COG2223 51 KGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPST-WQLLVIGLLLGLAGASFAVGMPNA 129 (417)
T ss_pred HHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCch-HHHHHHHHHHhcccceehcccccc
Confidence 333444555556666788889999999999887776655433332222 22211 111111 11112223455667788
Q ss_pred ccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccc---hhHHHHHHHHHHHHHHHHHHhcc
Q 011756 392 PEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH---QTAAILLLEALIVLSVVVILLIP 453 (478)
Q Consensus 392 ~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~---~~~~~~~~~~~~~i~~~~~~~~~ 453 (478)
++.||+|.+|++.|+.. .|++|..+..++.+.+....+ +.....++....++..+..++..
T Consensus 130 s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~ 193 (417)
T COG2223 130 SFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGM 193 (417)
T ss_pred cccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999998 999999999988887777666 45555666666666666666654
No 191
>PRK12382 putative transporter; Provisional
Probab=98.49 E-value=1.2e-05 Score=80.14 Aligned_cols=112 Identities=13% Similarity=-0.146 Sum_probs=69.0
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH---Hhh-----chhHHHHHHHHHHHHHhhhhhhhhhhhc
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPL---VTL-----QSNILLTALLSGARMFSMGTFIIANIFA 391 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 391 (478)
....+...++.+..|+++||+|||+.+..+.....+..+.. ... .+.....+.-...........+....+.
T Consensus 58 s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~ 137 (392)
T PRK12382 58 GIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWG 137 (392)
T ss_pred HHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445667788899999999999999887765544322211 110 0111111111111111111223345677
Q ss_pred ccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccch
Q 011756 392 PEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQ 431 (478)
Q Consensus 392 ~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~ 431 (478)
.|.+|++.|+++.|+......++..++|.+.+.+.+..++
T Consensus 138 ~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 177 (392)
T PRK12382 138 LGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGF 177 (392)
T ss_pred HhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccCh
Confidence 8999999999999998887788888999887766554443
No 192
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.47 E-value=1.5e-05 Score=82.02 Aligned_cols=129 Identities=19% Similarity=0.213 Sum_probs=83.4
Q ss_pred hHHHHHHHHHhhh-----chHHH-HHHHHHHHHHHHHHHHhhc---hhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcC
Q 011756 328 PGLLTAALLVDRV-----GRKLS-MTIMFIFVCIFLLPLVTLQ---SNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 398 (478)
Q Consensus 328 ~g~~~~~~l~dr~-----GRr~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~ 398 (478)
.+.++.+.++||+ |||+. +..+....++....+.+.. +.+..........++..........+.+|.+|.+
T Consensus 60 ~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~ 139 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE 139 (491)
T ss_pred HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 4678899999999 99985 4455444433333333321 1112222222222233333345678899999999
Q ss_pred hhHHHHHHHHHHHhHhHhHHHHHHHHHhh-ccchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 399 MRSTGAGVAYAVGRIGGMVCPLVAVGLVT-SCHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 399 ~R~~~~g~~~~~~~lg~~~~p~~~~~l~~-~~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
.|+++.++.....++|..+++.+...+.+ ..++...+.+.+++.++..+..++ .||+.
T Consensus 140 ~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~-~~e~~ 198 (491)
T PRK11010 140 ERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL-APEPT 198 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh-cCCCc
Confidence 99999999999999999999888777766 345666777777766666554444 57764
No 193
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.44 E-value=1.3e-05 Score=91.39 Aligned_cols=108 Identities=18% Similarity=0.008 Sum_probs=72.5
Q ss_pred HHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---hhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCc
Q 011756 321 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---TLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPT 397 (478)
Q Consensus 321 ~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~ 397 (478)
+..+..+++.+.+|+++||+|||+++..+..+..+..+... ...+.+...+..++..+......+..+.+.+|.+|.
T Consensus 55 ~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 134 (1146)
T PRK08633 55 LFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGK 134 (1146)
T ss_pred HHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCc
Confidence 34455677888999999999999998876654333222111 112222222222222222223345567899999999
Q ss_pred ChhHHHHHHHHHHHhHhHhHHHHHHHHHhhc
Q 011756 398 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 428 (478)
Q Consensus 398 ~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~ 428 (478)
+.|+++.|+......+|.+++|.+.+.+...
T Consensus 135 ~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 135 ENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999988777654
No 194
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.40 E-value=1.1e-06 Score=84.00 Aligned_cols=140 Identities=19% Similarity=0.149 Sum_probs=103.4
Q ss_pred HHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh-
Q 011756 321 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM- 399 (478)
Q Consensus 321 ~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~- 399 (478)
..++.++....+.|.++||+|+|.++++|..+.....+.+.+..+.+...+.=................+.++.||.+.
T Consensus 114 skA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~e 193 (464)
T KOG3764|consen 114 SKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNE 193 (464)
T ss_pred HHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchh
Confidence 3445677778888999999999999999988777666665554433321111122222222233344678889999976
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccccCcc
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKE 460 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g~~ 460 (478)
|++++|+.-.+-.+|-.++|.+.+.+.+..|...+|++++++++......++..+.++.++
T Consensus 194 r~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 194 RGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred hhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCc
Confidence 7999999999999999999998888888778888999999999999888888876665544
No 195
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.40 E-value=9.8e-06 Score=83.46 Aligned_cols=123 Identities=15% Similarity=0.133 Sum_probs=73.7
Q ss_pred HHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchh-HHHHHHHHHHHHHhhhhhhhhhhhcccccCcChh
Q 011756 322 TSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSN-ILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 400 (478)
Q Consensus 322 ~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R 400 (478)
..+....+..+.|.++|.+|||...+.+.++..+-.+.....++. .......+.. ...|.........+|+.|.+.|
T Consensus 87 ~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~G--vgaG~~~~~~~~isEl~p~k~R 164 (599)
T PF06609_consen 87 WTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYG--VGAGVQELAALAISELVPNKWR 164 (599)
T ss_pred HHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHH--HhhHHHHHHHHHHHHhcccchh
Confidence 345556667788999999999999888877666554444432222 2222111111 1233334456678999999999
Q ss_pred HHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 011756 401 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSV 446 (478)
Q Consensus 401 ~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~ 446 (478)
..+.++.....-.....+|.+...+....++.+.++++.....++.
T Consensus 165 ~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~ 210 (599)
T PF06609_consen 165 GLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIAL 210 (599)
T ss_pred hhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHH
Confidence 9888876654434444566665544433445566665555544443
No 196
>PRK10133 L-fucose transporter; Provisional
Probab=98.40 E-value=5e-05 Score=76.98 Aligned_cols=109 Identities=13% Similarity=0.037 Sum_probs=70.3
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---hhchhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 011756 318 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---TLQSNILLTALLSGARMFSMGTFIIANIFAPEI 394 (478)
Q Consensus 318 ~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~ 394 (478)
......++..++.+..+.++||+|||+.+..+..+.++..+... ...+........+.............+.+..|.
T Consensus 66 ~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~ 145 (438)
T PRK10133 66 IQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVL 145 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 34455677888899999999999999999887766555443321 111222222222222222222334456667787
Q ss_pred cCcChhHHHHHHHHHHHhHhHhHHHHHHHHHh
Q 011756 395 YPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV 426 (478)
Q Consensus 395 ~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~ 426 (478)
.|.+.|....++.+.+..+|..++|.+...+.
T Consensus 146 ~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 146 GPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777899999999999999988765543
No 197
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.39 E-value=7.9e-06 Score=81.07 Aligned_cols=100 Identities=20% Similarity=0.168 Sum_probs=65.4
Q ss_pred hhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhH----H----HHHHHHHHHHHhhhhhhhhhhhcccccCc
Q 011756 326 ELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNI----L----LTALLSGARMFSMGTFIIANIFAPEIYPT 397 (478)
Q Consensus 326 ~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~g~~~~~~~~~~E~~p~ 397 (478)
...+.++.|+++||+|||+.+..+..+..+..+......+.. . .....+..........+....+.+|.+|.
T Consensus 48 ~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~ 127 (394)
T TIGR00883 48 RPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPP 127 (394)
T ss_pred hhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCc
Confidence 356788999999999999998887766555444333322111 0 11111111111122234557788999999
Q ss_pred ChhHHHHHHHHHHHhHhHhHHHHHHHHH
Q 011756 398 SMRSTGAGVAYAVGRIGGMVCPLVAVGL 425 (478)
Q Consensus 398 ~~R~~~~g~~~~~~~lg~~~~p~~~~~l 425 (478)
+.|+...++......+|..+++.+...+
T Consensus 128 ~~r~~~~~~~~~~~~~G~~i~~~~~~~~ 155 (394)
T TIGR00883 128 GKRGFYGSFQQVGAPVGLLLAALTVLLL 155 (394)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988888888888765443
No 198
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.37 E-value=1.6e-05 Score=78.26 Aligned_cols=107 Identities=13% Similarity=0.016 Sum_probs=67.4
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
....++..++.+..++++||+|||+.+..+....++..... ...+........+...+...........+..|.+| +.
T Consensus 42 s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~ 119 (355)
T TIGR00896 42 ALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QR 119 (355)
T ss_pred HHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-ch
Confidence 44456677888999999999999999887765544333222 22222211111111111111122234456678886 68
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHhhc
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLVTS 428 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~~~ 428 (478)
|+++.|+.+....+|..++|.+.+.+.+.
T Consensus 120 ~~~~~~~~~~~~~~g~~i~~~~~~~l~~~ 148 (355)
T TIGR00896 120 VGLMTGLYSMALMGGAALAAAATVPLAQH 148 (355)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999988889999998887766554
No 199
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.36 E-value=1.5e-05 Score=78.32 Aligned_cols=128 Identities=23% Similarity=0.202 Sum_probs=80.2
Q ss_pred HHHHHHHHhhh-----chHHHH-HHHHHHHHHHHHHHHhhc---hhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChh
Q 011756 330 LLTAALLVDRV-----GRKLSM-TIMFIFVCIFLLPLVTLQ---SNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 400 (478)
Q Consensus 330 ~~~~~~l~dr~-----GRr~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R 400 (478)
..+.|.++||+ |||+.+ ..+....++....+.+.. +.+....+.+....+..........+.+|.+|++.|
T Consensus 38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r 117 (356)
T TIGR00901 38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEEL 117 (356)
T ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhh
Confidence 67889999998 898875 444444444333333321 111122222222222222334557788999999999
Q ss_pred HHHHHHHHHHHhHhHhHHHHHHHHHhhccc--------hhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 401 STGAGVAYAVGRIGGMVCPLVAVGLVTSCH--------QTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 401 ~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~--------~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
+.+.|+......+|..++|.+...+....+ +...+.+.+++.++..+..++..||.+
T Consensus 118 ~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~ 182 (356)
T TIGR00901 118 GYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQ 182 (356)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 999999998889999999988876665554 445666666666665555555566753
No 200
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.32 E-value=1.1e-05 Score=80.84 Aligned_cols=136 Identities=18% Similarity=0.160 Sum_probs=77.9
Q ss_pred HHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh---chh-HHHHHHHHHHHHHhhhhhhhhhhhcccccC
Q 011756 321 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL---QSN-ILLTALLSGARMFSMGTFIIANIFAPEIYP 396 (478)
Q Consensus 321 ~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p 396 (478)
+..++++.|+...++++||+|||..+..+.....+..+.+... ... .....-+..+.. ..........|..|+.|
T Consensus 68 ~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~-~gl~~~~~pmyl~E~sP 146 (485)
T KOG0569|consen 68 IFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLA-CGLSTGLVPMYLTEISP 146 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH-hHHHHHHHHHHHhhcCh
Confidence 4456788899999999999999988777655443332222221 111 111111111111 11122456788899999
Q ss_pred cChhHHHHHHHHHHHhHhHhHHHHHH-HHHhhccchhHHHH-HHHHHHHHHHHHHHhccccccC
Q 011756 397 TSMRSTGAGVAYAVGRIGGMVCPLVA-VGLVTSCHQTAAIL-LLEALIVLSVVVILLIPFETKG 458 (478)
Q Consensus 397 ~~~R~~~~g~~~~~~~lg~~~~p~~~-~~l~~~~~~~~~~~-~~~~~~~i~~~~~~~~~pet~g 458 (478)
++.||....+......+|-.++..+. +.++... ..|+++ .+..+..+..++.+.+.||+.+
T Consensus 147 ~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~-~~W~~l~~~~~i~~~~~l~~l~~~PESPk 209 (485)
T KOG0569|consen 147 KNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTE-DLWPYLLAFPLIPALLQLALLPFLPESPK 209 (485)
T ss_pred hhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCC-cchHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 99999998888887778777774443 3333222 223332 2223333334455556688764
No 201
>PTZ00207 hypothetical protein; Provisional
Probab=98.30 E-value=9.2e-05 Score=76.75 Aligned_cols=122 Identities=13% Similarity=0.180 Sum_probs=71.7
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh------chhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHH
Q 011756 329 GLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL------QSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 402 (478)
Q Consensus 329 g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~ 402 (478)
..+..|++.||+|||+++.++..+.++..+..... .+.+...+............+........+.|| +.||+
T Consensus 77 ~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~ 155 (591)
T PTZ00207 77 FLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGA 155 (591)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHH
Confidence 34567999999999999988877665544433332 111211111112211111223344556678887 78999
Q ss_pred HHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhc
Q 011756 403 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 452 (478)
Q Consensus 403 ~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 452 (478)
+.|+......+|+.+.+.+...+.. .+....+++.++..++..++.+.+
T Consensus 156 a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~ll~~~~ 204 (591)
T PTZ00207 156 VVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVGILAIVF 204 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999998765544444443 233445555555555544444443
No 202
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.28 E-value=9.4e-05 Score=74.97 Aligned_cols=139 Identities=12% Similarity=-0.002 Sum_probs=82.3
Q ss_pred HHHHHhhhhhHHHHHHHHHh----hhchHHHHHHHH-HHHHHHHHHHHhhchh-------------HH---HHH-HHHHH
Q 011756 319 VFITSFAELPGLLTAALLVD----RVGRKLSMTIMF-IFVCIFLLPLVTLQSN-------------IL---LTA-LLSGA 376 (478)
Q Consensus 319 ~~~~~~~~~~g~~~~~~l~d----r~GRr~~~~~~~-~~~~~~~~~~~~~~~~-------------~~---~~~-~~~~~ 376 (478)
..+..+..++...+.|+++| |+|||+.++... ....+.+..+.+..+. .. ..+ .+...
T Consensus 45 ~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~ll 124 (477)
T TIGR01301 45 WLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWIL 124 (477)
T ss_pred HHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHH
Confidence 34555667778888999999 599999877643 3333333333221110 00 111 11111
Q ss_pred HHHhhhhhhhhhhhcccccCcChh--HHHHHHHHHHHhHhHhHHHHHHHHHh--hc--------c-----chhHHHHHHH
Q 011756 377 RMFSMGTFIIANIFAPEIYPTSMR--STGAGVAYAVGRIGGMVCPLVAVGLV--TS--------C-----HQTAAILLLE 439 (478)
Q Consensus 377 ~~~~~g~~~~~~~~~~E~~p~~~R--~~~~g~~~~~~~lg~~~~p~~~~~l~--~~--------~-----~~~~~~~~~~ 439 (478)
.+......++.-.+.+|+.|.+.| +.+.++.+.+..+|+.+++.+..... .. . +....|.+-+
T Consensus 125 d~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a 204 (477)
T TIGR01301 125 DVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDI 204 (477)
T ss_pred HHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHH
Confidence 122222334567899999999876 57889888888899988887654321 10 0 1123455555
Q ss_pred HHHHHHHHHHHhcccccc
Q 011756 440 ALIVLSVVVILLIPFETK 457 (478)
Q Consensus 440 ~~~~i~~~~~~~~~pet~ 457 (478)
++.+++.++..+..+|..
T Consensus 205 ~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 205 ILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHeeeeeccC
Confidence 666677777777777753
No 203
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.27 E-value=1.6e-05 Score=82.29 Aligned_cols=138 Identities=20% Similarity=0.131 Sum_probs=85.9
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcC
Q 011756 319 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 398 (478)
Q Consensus 319 ~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~ 398 (478)
.....+++..|.+..+.++|++|||+.+..+.+...+..+......+.....+.-++..+...+...+..+|.+|+-|++
T Consensus 95 ~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~ 174 (513)
T KOG0254|consen 95 TSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAH 174 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChh
Confidence 34556788999999999999999999988776655544444333332221111111221222233356789999999999
Q ss_pred hhHHHHHHHHHHHhHhHhHHHHHHHHHhhcc--chhHHHHHHHHHHHHHHHHHHhccccccC
Q 011756 399 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC--HQTAAILLLEALIVLSVVVILLIPFETKG 458 (478)
Q Consensus 399 ~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~--~~~~~~~~~~~~~~i~~~~~~~~~pet~g 458 (478)
.|+.-.+.......+|..++ ++.+...... ++...+.+..+.+++..+. +++.||+..
T Consensus 175 ~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~ 234 (513)
T KOG0254|consen 175 IRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPR 234 (513)
T ss_pred hhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChH
Confidence 99999998888777666565 4445444332 2333444444555555555 667787653
No 204
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.26 E-value=4.9e-05 Score=75.63 Aligned_cols=135 Identities=15% Similarity=0.087 Sum_probs=98.4
Q ss_pred HHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhchHHHHHHH
Q 011756 42 EVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFSPNYISLLIL 104 (478)
Q Consensus 42 ~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a~~~~~l~~~ 104 (478)
.....++..+.+ +|.|.++.+.|.+.+...++.+. +..+.+...+..++.++++|++.+++.
T Consensus 221 ~~~~~~~~~~~l-~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (382)
T TIGR00902 221 HAAYYGFSAIYW-QAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLL 299 (382)
T ss_pred HHHHHHHHHHHH-HHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHH
Confidence 333344444444 56899999998877755443222 445555556666677889999999999
Q ss_pred HHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHH-HHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHHHH
Q 011756 105 RGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFS-TFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIF 179 (478)
Q Consensus 105 R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~-~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~l~~~~ 179 (478)
+++.|+..|... ....|+.+. |+++|++..++++ ....+|..+++.+++.+.++.|+ ..|++.+..+++.++.
T Consensus 300 q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 300 QILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 999999998764 456788887 9999999999986 56889999999999999888887 5566666555544433
No 205
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.23 E-value=1.3e-06 Score=85.15 Aligned_cols=141 Identities=13% Similarity=0.018 Sum_probs=91.5
Q ss_pred HhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHH
Q 011756 323 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 402 (478)
Q Consensus 323 ~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~ 402 (478)
.+...+.+.+.|++.||..||+++..|..+-.+..+...+..+-+...++-.+....-....++...++++.||...|++
T Consensus 78 ~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~ 157 (493)
T KOG1330|consen 78 IVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSR 157 (493)
T ss_pred HHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhH
Confidence 34566778999999999999999988876665544443333222322222111111123345677899999999999999
Q ss_pred HHHHHHHHHhHhHhHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHhccccccCcccch
Q 011756 403 GAGVAYAVGRIGGMVCPLVAVGLVTSCH-QTAAILLLEALIVLSVVVILLIPFETKGKELVN 463 (478)
Q Consensus 403 ~~g~~~~~~~lg~~~~p~~~~~l~~~~~-~~~~~~~~~~~~~i~~~~~~~~~pet~g~~l~~ 463 (478)
..++.+.....|+.++-.....+-.... +.+++..-+++.++..++..++.+|...+.-||
T Consensus 158 ~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~ 219 (493)
T KOG1330|consen 158 VLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDE 219 (493)
T ss_pred HHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccc
Confidence 9999999999887776543332222222 345666677777777777777777755443333
No 206
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.23 E-value=0.00013 Score=73.13 Aligned_cols=130 Identities=18% Similarity=0.152 Sum_probs=81.2
Q ss_pred hhHHHHHHHHHhhh-----chHH-HHHHHHHHHHHHHHHHHhhc--hh-HHHHHHHHHHHHHhhhhhhhhhhhcccccCc
Q 011756 327 LPGLLTAALLVDRV-----GRKL-SMTIMFIFVCIFLLPLVTLQ--SN-ILLTALLSGARMFSMGTFIIANIFAPEIYPT 397 (478)
Q Consensus 327 ~~g~~~~~~l~dr~-----GRr~-~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~ 397 (478)
.....+.++++||+ |||+ .+..+....++....+.... .+ +....+.+...++.....+....+.+|.+|+
T Consensus 46 ~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~ 125 (402)
T PRK11902 46 YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHP 125 (402)
T ss_pred HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 35668889999999 8876 45555555544333333321 11 2122222222222223334567889999999
Q ss_pred ChhHHHHHHHHHHHhHhHhHHHHHHHHHhhc-cchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 398 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS-CHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 398 ~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~-~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
+.|+++.++......+|..+++.+...+.+. .++...+.+.+++.++..+. .+..||++
T Consensus 126 ~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~-~~~~~e~~ 185 (402)
T PRK11902 126 EERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT-TLWAPEPE 185 (402)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH-HHhcCCCc
Confidence 9999999999988888988888877766664 35556676666666555443 34456654
No 207
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.19 E-value=0.00019 Score=71.55 Aligned_cols=107 Identities=15% Similarity=0.097 Sum_probs=75.3
Q ss_pred HhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHH
Q 011756 323 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 402 (478)
Q Consensus 323 ~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~ 402 (478)
..++....+.+|+++||+|-|+.+..+.+..+++.+...+..+.....++-+..+ ...++....+.+....+|.+.|++
T Consensus 72 ~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llG-vaEA~~~A~~syI~~WfP~kER~r 150 (511)
T TIGR00806 72 PYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYS-VTMAARIAYSSYIFSLVPPSRYQR 150 (511)
T ss_pred HHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCHHHHHH
Confidence 4567778899999999999999988877666655544444322222222222222 223333367889999999999999
Q ss_pred HHHHHHHHHhHhHhHHHHHHHHHhhccch
Q 011756 403 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQ 431 (478)
Q Consensus 403 ~~g~~~~~~~lg~~~~p~~~~~l~~~~~~ 431 (478)
+.|+.+....+|.++++.+... +...++
T Consensus 151 atsi~~sg~~vG~~Ia~~L~ql-l~s~gW 178 (511)
T TIGR00806 151 AAAYSRAAVLLGVFLSSVLGQL-LVTLGW 178 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHhcCc
Confidence 9999999999999999988776 334443
No 208
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.16 E-value=7.9e-05 Score=77.68 Aligned_cols=157 Identities=17% Similarity=0.228 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHH
Q 011756 30 AYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLS 92 (478)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~ 92 (478)
...++..+.+++-...+..+..++++.|++++.+.|++.+.+=+|-.. +-.+.++.++++++.
T Consensus 100 ~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~ 179 (735)
T KOG3626|consen 100 VLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLF 179 (735)
T ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHH
Confidence 344466677777777777788889999999999999887776444222 011112222222111
Q ss_pred hh--------------------------------------------------hch--HHHHHHHHHHhhcccCch-hhHH
Q 011756 93 AF--------------------------------------------------SPN--YISLLILRGLAGAGLGSG-HVFF 119 (478)
Q Consensus 93 ~~--------------------------------------------------a~~--~~~l~~~R~l~Gig~g~~-~~~~ 119 (478)
++ +++ +..++++-++.|+|.-.. +...
T Consensus 180 alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGi 259 (735)
T KOG3626|consen 180 ALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGI 259 (735)
T ss_pred hChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCC
Confidence 11 111 225788899998887654 4567
Q ss_pred HHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhc----C-------------c--chHHHHHHhhHHHHHHHHHH
Q 011756 120 SWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP----I-------------L--TWRWLLALSAIPAFVLLIFI 180 (478)
Q Consensus 120 ~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~----~-------------~--~WR~~f~i~~i~~~l~~~~~ 180 (478)
+|+-|.+.+++-....++......+|+++|.+++.+... . | .|+.=|.+.+...++..+..
T Consensus 260 sYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~ 339 (735)
T KOG3626|consen 260 SYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPL 339 (735)
T ss_pred ccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999988888776421 1 0 26666777776666666777
Q ss_pred HhcCCC
Q 011756 181 VFMPES 186 (478)
Q Consensus 181 ~~lpES 186 (478)
+++|..
T Consensus 340 f~fPk~ 345 (735)
T KOG3626|consen 340 FFFPKE 345 (735)
T ss_pred HhCccc
Confidence 778755
No 209
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.16 E-value=0.00012 Score=73.12 Aligned_cols=136 Identities=12% Similarity=0.102 Sum_probs=73.3
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH---Hhhc--hhHHHHHHH---HHHHHHhhhhhhhhhh
Q 011756 318 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPL---VTLQ--SNILLTALL---SGARMFSMGTFIIANI 389 (478)
Q Consensus 318 ~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~---~~~~~~~~g~~~~~~~ 389 (478)
...+..+...++.+..|+++||+|||+.+..+....++..... .... ......... ...........+....
T Consensus 43 ~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 122 (396)
T TIGR00882 43 VFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEA 122 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHH
Confidence 3455567778888999999999999998876544333222111 1110 000111111 1111111111222233
Q ss_pred hcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccc
Q 011756 390 FAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 456 (478)
Q Consensus 390 ~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet 456 (478)
+..|.- +.++...|.....+.+|..++|.+.+.+.+ .++...+.+.+.+.++..++.+...||.
T Consensus 123 ~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 186 (396)
T TIGR00882 123 YIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKA 186 (396)
T ss_pred HHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 333332 233456677888888999999988765543 4555666666666666555555555554
No 210
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.11 E-value=0.011 Score=57.62 Aligned_cols=74 Identities=12% Similarity=0.221 Sum_probs=53.4
Q ss_pred HHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcc-hHHHHHHhhHHHH
Q 011756 101 LLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILT-WRWLLALSAIPAF 174 (478)
Q Consensus 101 l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-WR~~f~i~~i~~~ 174 (478)
..+.-.+.|+|++.. .+...+++|.+|+++|+++.++.-...-+|.++++.+...+++.++ =|..-.++..+.+
T Consensus 92 a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i 167 (403)
T PF03209_consen 92 AALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALI 167 (403)
T ss_pred HHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHH
Confidence 344555667777664 3455678999999999999999999999999999998887766543 4444444444433
No 211
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.99 E-value=0.00023 Score=65.57 Aligned_cols=160 Identities=21% Similarity=0.177 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH----------------HHHHHHHHHHHH
Q 011756 26 GLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS----------------ILGGALVTFVAG 89 (478)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~----------------~~~~~~~~~i~~ 89 (478)
|..+..+.+.....+ ....++...|++++.+|++++|...+.+...+|... +.++.....++-
T Consensus 2 W~~l~a~~~v~~~~G-t~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G~~~G~l~d~~gp~~~l~iG~~~~~~GY 80 (250)
T PF06813_consen 2 WLSLVASIWVQLCSG-TTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFGILAGLLYDRFGPWVVLLIGAVLGFVGY 80 (250)
T ss_pred hhhHHHHHHHHHhcC-cccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhccHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 444333333333333 334566778999999999999998888887666333 222222222222
Q ss_pred HHH-----hh--hchHHHHHHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Q 011756 90 LLS-----AF--SPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILT 161 (478)
Q Consensus 90 ~~~-----~~--a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 161 (478)
... .. .++++.+.+.-++.|.|.+.. .....-..+.+| ++||++.++.-...+++..+-..+...+-+...
T Consensus 81 ~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~ 159 (250)
T PF06813_consen 81 GLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDP 159 (250)
T ss_pred HHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCCh
Confidence 111 11 246778888888877665433 222233457787 579999999999999998887777766666666
Q ss_pred hHHHHHHhhHHHHHHHHHHHhcCCCc
Q 011756 162 WRWLLALSAIPAFVLLIFIVFMPESP 187 (478)
Q Consensus 162 WR~~f~i~~i~~~l~~~~~~~lpESP 187 (478)
-+.+.+....|.++.++..+++.+-|
T Consensus 160 ~~fll~la~~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 160 SSFLLFLAVLPAVVCLVAMFFVRPVP 185 (250)
T ss_pred HHHHHHHHHHHHHHHHHHhhheeccC
Confidence 77777777778877766666654433
No 212
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.94 E-value=0.0046 Score=61.65 Aligned_cols=131 Identities=18% Similarity=0.195 Sum_probs=94.6
Q ss_pred HhHHhhhhhcCCCcchhhHHHHHHH---------HHHHH---------HHHHHHHHHHHHHHHhhh--chHHHHHHHHHH
Q 011756 48 FVGPAVKSEWGLSSSEESLITTVVF---------AGMMS---------ILGGALVTFVAGLLSAFS--PNYISLLILRGL 107 (478)
Q Consensus 48 ~~~~~~~~~~~l~~~~~~~~~s~~~---------~G~~~---------~~~~~~~~~i~~~~~~~a--~~~~~l~~~R~l 107 (478)
|...+..+.+++++++..-+.+++. .|.+. ++.+.++..++-++.+.+ .+...++++-.+
T Consensus 47 Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~ 126 (498)
T COG3104 47 YLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLAL 126 (498)
T ss_pred HHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHH
Confidence 4344444446688887766655542 12222 666777778887777776 478899999999
Q ss_pred hhcccCch-hhHHHHHhhccCCC--CchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHHH
Q 011756 108 AGAGLGSG-HVFFSWFMEFVPPS--NRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLI 178 (478)
Q Consensus 108 ~Gig~g~~-~~~~~~~~E~~p~~--~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~l~~~ 178 (478)
.++|.|.. +-..+.+.|..|++ +|-...+++..+.++|.+++|.+...+....||...|...++--.+.++
T Consensus 127 I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~ 200 (498)
T COG3104 127 IIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLV 200 (498)
T ss_pred HHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 99999987 45567788888875 3455567777788899999999999998899999999887764444433
No 213
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.93 E-value=9.1e-05 Score=78.42 Aligned_cols=107 Identities=9% Similarity=0.055 Sum_probs=70.2
Q ss_pred HHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhc----------------------------h-------
Q 011756 321 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ----------------------------S------- 365 (478)
Q Consensus 321 ~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~----------------------------~------- 365 (478)
...+++.++.+..+++.||.|||+.+.++.++.++..+.....+ .
T Consensus 76 ~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 155 (633)
T TIGR00805 76 SYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRP 155 (633)
T ss_pred hhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccc
Confidence 33455667788899999999999988777665544333322211 0
Q ss_pred ----------h--HHHHHHHHHHHH----HhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhh
Q 011756 366 ----------N--ILLTALLSGARM----FSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 427 (478)
Q Consensus 366 ----------~--~~~~~~~~~~~~----~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~ 427 (478)
. .....++....+ .....++....+..|.+|++.|+...|+.+....+|..+++.+.+.+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~ 233 (633)
T TIGR00805 156 TQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQ 233 (633)
T ss_pred cccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHh
Confidence 0 000111112221 1222345567899999999999999999999999999999988776653
No 214
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.93 E-value=0.00014 Score=72.04 Aligned_cols=129 Identities=22% Similarity=0.271 Sum_probs=80.5
Q ss_pred HHHHHHHHHhhh-chHHHHHHHHHHHHHHHHHHHhhc---hhHHHHHHHHHHHHHhhhhh-hhhhhhcccccCcC--hhH
Q 011756 329 GLLTAALLVDRV-GRKLSMTIMFIFVCIFLLPLVTLQ---SNILLTALLSGARMFSMGTF-IIANIFAPEIYPTS--MRS 401 (478)
Q Consensus 329 g~~~~~~l~dr~-GRr~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~-~~~~~~~~E~~p~~--~R~ 401 (478)
..+++||++||+ |+|+.+..+.++..+--+.+.... .......+..+. ...|.. +..-...+|++|++ .|-
T Consensus 77 t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~--iG~Gl~K~NiS~llg~ly~~~DprrD 154 (498)
T COG3104 77 TPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALII--VGTGLFKPNISSLLGELYPKDDPRRD 154 (498)
T ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHH--hccccccccHHHHHHHhcCCCCcccC
Confidence 457899999996 999998888766554333333221 111222222222 122222 33456778999773 378
Q ss_pred HHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccccCc
Q 011756 402 TGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGK 459 (478)
Q Consensus 402 ~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g~ 459 (478)
.+.++-+...++|++++|.+.+++-+..++...|...+.-..++.+..++.....++.
T Consensus 155 ~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~ 212 (498)
T COG3104 155 GGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGI 212 (498)
T ss_pred CCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCC
Confidence 8999999999999999999998876665555566555555556655555544333443
No 215
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.91 E-value=0.004 Score=62.99 Aligned_cols=81 Identities=22% Similarity=0.333 Sum_probs=63.3
Q ss_pred HhhcccCch---hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHHH-HHHh
Q 011756 107 LAGAGLGSG---HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLI-FIVF 182 (478)
Q Consensus 107 l~Gig~g~~---~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~l~~~-~~~~ 182 (478)
+.|+.-|.. ....+|+++.+..++|....++....+..+..++|..+..+....|-=..|.+..+..++..+ .+.+
T Consensus 119 ~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~ 198 (463)
T KOG2816|consen 119 LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLF 198 (463)
T ss_pred hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhc
Confidence 555543332 234578999999999999999999999999999999988877777788888888877777644 5667
Q ss_pred cCCCc
Q 011756 183 MPESP 187 (478)
Q Consensus 183 lpESP 187 (478)
+|||-
T Consensus 199 l~Esl 203 (463)
T KOG2816|consen 199 LPESL 203 (463)
T ss_pred ccccc
Confidence 99983
No 216
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.90 E-value=0.00044 Score=68.22 Aligned_cols=174 Identities=12% Similarity=0.125 Sum_probs=113.0
Q ss_pred cccccHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHH---HHH------
Q 011756 7 RLVYTLDEALTFMGFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAG---MMS------ 77 (478)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G---~~~------ 77 (478)
+++.+++|.++.....++-..++..++...+.|.+|-+...|-....+.. +.++...|.+.|...+. .+.
T Consensus 205 ~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~-~~g~~~~G~l~s~~v~~E~~~m~~~p~li 283 (412)
T PF01306_consen 205 KDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSA-GQGNQMYGYLWSVQVFLEALMMFFSPWLI 283 (412)
T ss_dssp -----HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-ccChhHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 33445666666554445545566667777788999987555543322211 12233355555554321 111
Q ss_pred --------HHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHH-HHHHHHHHHH
Q 011756 78 --------ILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVV-FSTFWTFGSV 147 (478)
Q Consensus 78 --------~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~-~~~~~~~G~~ 147 (478)
++++..+.++=-+.+++++|.+.+.+.+.+.|+-.+... ....|+++.+|+|...+...+ .+...++|..
T Consensus 284 ~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~ 363 (412)
T PF01306_consen 284 NRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGII 363 (412)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHH
T ss_pred HhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHH
Confidence 344444445545678899999999999999998887764 456799999999988877766 4677889999
Q ss_pred HHHHHHHHHhcCcchHHHHHHhhHHHHHHHHHHH
Q 011756 148 SEAALAWIVMPILTWRWLLALSAIPAFVLLIFIV 181 (478)
Q Consensus 148 ~~~~~~~~~~~~~~WR~~f~i~~i~~~l~~~~~~ 181 (478)
+.+.+++.+.++.|.|..|++.+...+...++..
T Consensus 364 i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~ 397 (412)
T PF01306_consen 364 ILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISA 397 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHhe
Confidence 9999999998999999999888876665544433
No 217
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.86 E-value=0.00081 Score=66.86 Aligned_cols=125 Identities=14% Similarity=0.055 Sum_probs=86.5
Q ss_pred hhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCchh-
Q 011756 55 SEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH- 116 (478)
Q Consensus 55 ~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~~- 116 (478)
+|.|.++.+.|.+.+...++... +..+.+...++.+..+.+++++.+++..++.|++.+...
T Consensus 233 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 312 (382)
T PRK11128 233 QAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHL 312 (382)
T ss_pred HHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 56888888888877755433222 333444444444556678899999999999999888653
Q ss_pred hHHHHHhhccCCCCchhHHHHHH-HHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHHHHHH
Q 011756 117 VFFSWFMEFVPPSNRGKWMVVFS-TFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIV 181 (478)
Q Consensus 117 ~~~~~~~E~~p~~~Rg~~~~~~~-~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~l~~~~~~ 181 (478)
....++.|. |++++++..+..+ .....|..+++.+++.+.+..|+. .++..++.+++.++.+.
T Consensus 313 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~~-~~~~~~~~~~~~~~~~~ 376 (382)
T PRK11128 313 AAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGAG-VFWVMALVALPALFIRP 376 (382)
T ss_pred HHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHH
Confidence 445677776 6667888888876 556778889999999988888884 56655555554444443
No 218
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.85 E-value=0.0073 Score=59.40 Aligned_cols=104 Identities=25% Similarity=0.232 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCchhhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 011756 78 ILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVM 157 (478)
Q Consensus 78 ~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~ 157 (478)
......++.++-++.++++|.+.=+++=.+.+++.|.+.+...=++...|+ ...+.|..+.+.+.++|+.....+.
T Consensus 92 i~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT 167 (402)
T PF02487_consen 92 ILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTHFYGK----SSLSAWSSGTGGAGLVGALYYLGLT 167 (402)
T ss_pred HHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHHhcCc----cccccccCCcChhhHHHHHHHHHHH
Confidence 344555666666778889999888888888888777653332112334443 3467777788878888887766555
Q ss_pred cCcch--HHHHHHhhH-HHHHHHHHHHhcCCC
Q 011756 158 PILTW--RWLLALSAI-PAFVLLIFIVFMPES 186 (478)
Q Consensus 158 ~~~~W--R~~f~i~~i-~~~l~~~~~~~lpES 186 (478)
. .++ |..+.+... |.+..+..++.+|.+
T Consensus 168 ~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~ 198 (402)
T PF02487_consen 168 T-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSP 198 (402)
T ss_pred H-hCcCHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4 444 666666554 444444444455544
No 219
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.81 E-value=0.00022 Score=73.07 Aligned_cols=158 Identities=14% Similarity=0.198 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-------------------HHHHHHHHHH
Q 011756 27 LALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-------------------ILGGALVTFV 87 (478)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-------------------~~~~~~~~~i 87 (478)
..++...++..+...-.....+..|...++.+.++++.+.+.|...+.-++ ..++.++..+
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl 377 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGL 377 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHH
Confidence 455566677777777777778888888889999999999888886543221 4555666666
Q ss_pred HHHHHhhhchHHHHHHHHHHhhcccCchhhHH-HHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcc-hHHH
Q 011756 88 AGLLSAFSPNYISLLILRGLAGAGLGSGHVFF-SWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILT-WRWL 165 (478)
Q Consensus 88 ~~~~~~~a~~~~~l~~~R~l~Gig~g~~~~~~-~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-WR~~ 165 (478)
+.+...+++++..+.+.-.+.|+..|...... ..+.|..+.++-..+.|+.....+++.+.++++++.+.+..+ |...
T Consensus 378 ~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~ 457 (509)
T KOG2504|consen 378 ARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHA 457 (509)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeee
Confidence 66788899999999999999999998875544 357899999999999999999999999999999998777665 9999
Q ss_pred HHHhhHHHHHHHHHHHhcC
Q 011756 166 LALSAIPAFVLLIFIVFMP 184 (478)
Q Consensus 166 f~i~~i~~~l~~~~~~~lp 184 (478)
|...++..++....++..|
T Consensus 458 f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 458 FYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred hhhcChHHHHHHHHHHHhH
Confidence 9999987777766655555
No 220
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.80 E-value=0.0015 Score=66.54 Aligned_cols=148 Identities=18% Similarity=0.257 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHH----HHHHH---------------HHHHHHHHHHHHHHHhh---
Q 011756 37 FSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVF----AGMMS---------------ILGGALVTFVAGLLSAF--- 94 (478)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~----~G~~~---------------~~~~~~~~~i~~~~~~~--- 94 (478)
..|++.. .+++.....++++|+++.+...+.-... .|... ++.+..++.+..+...+
T Consensus 293 ~~dg~~t-i~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~ 371 (477)
T PF11700_consen 293 YSDGVNT-IISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFW 371 (477)
T ss_pred HHHHHHH-HHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhh
Confidence 4577763 4555555667789999888544332221 12111 33333333333333333
Q ss_pred -----hchHHHHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcc-hHHHHH
Q 011756 95 -----SPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILT-WRWLLA 167 (478)
Q Consensus 95 -----a~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-WR~~f~ 167 (478)
..+-+.+.+.=.+.|+..|+.. ..-++++|..|+++.+...|++....-....++|.+...+.+..| =|+-+.
T Consensus 372 ~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~ 451 (477)
T PF11700_consen 372 PSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFL 451 (477)
T ss_pred hcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH
Confidence 4567788889999999999864 456789999999999999999999999999999998887766544 788777
Q ss_pred HhhHHHHHHHHHHHhcCC
Q 011756 168 LSAIPAFVLLIFIVFMPE 185 (478)
Q Consensus 168 i~~i~~~l~~~~~~~lpE 185 (478)
...+..++.+++.+++++
T Consensus 452 ~l~~lf~~gl~ll~~v~~ 469 (477)
T PF11700_consen 452 FLLVLFLIGLILLFFVDV 469 (477)
T ss_pred HHHHHHHHHHHHHhhccc
Confidence 666665555666666654
No 221
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.80 E-value=0.00039 Score=70.39 Aligned_cols=132 Identities=15% Similarity=0.086 Sum_probs=94.6
Q ss_pred HHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh--hchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcC
Q 011756 321 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT--LQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 398 (478)
Q Consensus 321 ~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~ 398 (478)
....+.+++.+-++++.||+|-|+++..+..+.++..+.... ....+...++-+..++.....++.+..+.+.-.|++
T Consensus 81 s~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~ 160 (466)
T KOG2532|consen 81 SFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPN 160 (466)
T ss_pred HHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHH
Confidence 334677888899999999999999988877766654433322 222222222223333333345677888999999999
Q ss_pred hhHHHHHHHHHHHhHhHhHHHHHHHHHhhc-cchhHHHHHHHHHHHHHHHHHHhc
Q 011756 399 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTS-CHQTAAILLLEALIVLSVVVILLI 452 (478)
Q Consensus 399 ~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 452 (478)
.|++..++..+..++|.+++-.+.+.+-+. .|+...|++++++.++-.++.+++
T Consensus 161 Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 161 ERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999887777888777 677788888888777655554444
No 222
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=97.79 E-value=0.00057 Score=69.14 Aligned_cols=138 Identities=19% Similarity=0.138 Sum_probs=76.1
Q ss_pred HHHHhhhhhHHHHHHHHHhh----hchHHH-HHHHHHHHHHHHHHHHhhch----hHHHHHH--HHHHHHHhhhhhhhhh
Q 011756 320 FITSFAELPGLLTAALLVDR----VGRKLS-MTIMFIFVCIFLLPLVTLQS----NILLTAL--LSGARMFSMGTFIIAN 388 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr----~GRr~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~g~~~~~~ 388 (478)
.+..+...+...+.|+++|| +|||+. +..+....++..+.+....+ ....... .............+..
T Consensus 42 ~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (437)
T TIGR00792 42 LVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYW 121 (437)
T ss_pred HHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHh
Confidence 34445567778889999997 677664 44554444433332222111 1111111 1111111111122346
Q ss_pred hhccccc-CcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhc-------cchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 389 IFAPEIY-PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS-------CHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 389 ~~~~E~~-p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
.+.+|+. +.+.|++..++....+.+|+.+++.+.+++... .++...+.+.+++.++..++.++..||++
T Consensus 122 al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 122 SLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERY 198 (437)
T ss_pred hCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecC
Confidence 6778887 568899999998888888888777665555432 12233455556565655555556666654
No 223
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.75 E-value=0.0023 Score=63.70 Aligned_cols=71 Identities=21% Similarity=0.154 Sum_probs=50.9
Q ss_pred hhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccc
Q 011756 386 IANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 456 (478)
Q Consensus 386 ~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet 456 (478)
....+..|..+.+.++...+.......+|..+++.....+.+..++...+.+.+++.++..+..++.+||.
T Consensus 117 ~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~ 187 (390)
T TIGR02718 117 ATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRA 187 (390)
T ss_pred HHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 34556778888888888877776666788888887766676666767778777777776666666665543
No 224
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.74 E-value=0.00038 Score=70.26 Aligned_cols=137 Identities=20% Similarity=0.141 Sum_probs=94.3
Q ss_pred HhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHH
Q 011756 323 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 402 (478)
Q Consensus 323 ~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~ 402 (478)
++..+..+.+.|.++||.|||..+......+.+-.+...+.. +...+ .....+.....++..+.+.++.-..+.|..
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~-~~~l~g~~~~~~s~~~a~vadis~~~~R~~ 148 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--YWFFL-LLGLSGGFSAIFSVGFAYVADISSEEERSS 148 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HHHhh-hcccccchhhhhhhhhhheeeccchhHHHH
Confidence 344555677888999999999988776554443222222211 21111 111112223345567889999999999999
Q ss_pred HHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccccCcccc
Q 011756 403 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELV 462 (478)
Q Consensus 403 ~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g~~l~ 462 (478)
..|+.+..-..+..++|.+...+....+....+.+-.+..++..+...+..||+...+..
T Consensus 149 ~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~ 208 (463)
T KOG2816|consen 149 SIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKER 208 (463)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccc
Confidence 999999988888999999888777665555666777777788888888889998765443
No 225
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.67 E-value=0.0013 Score=60.53 Aligned_cols=134 Identities=13% Similarity=0.057 Sum_probs=75.0
Q ss_pred HHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q 011756 282 VYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV 361 (478)
Q Consensus 282 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~ 361 (478)
+.|....+.|.+.+..+ .++...........++.-.| +..|.+.|+.|.|..+.++.....+....+.
T Consensus 17 t~Y~Fs~yS~~Lk~~l~-----------~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~ 84 (250)
T PF06813_consen 17 TTYTFSAYSPQLKSRLG-----------YSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLW 84 (250)
T ss_pred cccchhhhhHHHHHHhC-----------CCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 44566666676654322 22222222334455655555 7789999999999998887765544322222
Q ss_pred h--hc----hh-HHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhc
Q 011756 362 T--LQ----SN-ILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 428 (478)
Q Consensus 362 ~--~~----~~-~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~ 428 (478)
. .. .+ +......+..................+-|| +.||++.|+.-...-+++.+-..+...+...
T Consensus 85 l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 85 LAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 1 11 11 111111111111111111223344558898 5899999999999989888877776655543
No 226
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.66 E-value=6e-07 Score=91.40 Aligned_cols=104 Identities=18% Similarity=0.186 Sum_probs=68.6
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhc---hhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 011756 319 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ---SNILLTALLSGARMFSMGTFIIANIFAPEIY 395 (478)
Q Consensus 319 ~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~ 395 (478)
.....++.++|++++|+++||+|||+.+..+.....+..+...... +.+.....-+..++...+.......+..|..
T Consensus 52 ~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~ 131 (451)
T PF00083_consen 52 TSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIA 131 (451)
T ss_pred HHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3455577889999999999999999988776655444333333322 2222222222222222334556789999999
Q ss_pred CcChhHHHHHHHHHHHhHhHhHHHHHH
Q 011756 396 PTSMRSTGAGVAYAVGRIGGMVCPLVA 422 (478)
Q Consensus 396 p~~~R~~~~g~~~~~~~lg~~~~p~~~ 422 (478)
|++.|+...++......+|..++..+.
T Consensus 132 ~~~~R~~~~~~~~~~~~~G~~~~~~~~ 158 (451)
T PF00083_consen 132 PPKHRGFLSSLFQLFWALGILLASLIG 158 (451)
T ss_pred ccccccccccccccccccccccccccc
Confidence 999999999888877777766665543
No 227
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.51 E-value=0.0058 Score=62.52 Aligned_cols=125 Identities=14% Similarity=0.140 Sum_probs=68.9
Q ss_pred HHHHHHHhhhc-----hHHHHHHHHHHHH-HHHHHHHhhchh-HHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHH-
Q 011756 331 LTAALLVDRVG-----RKLSMTIMFIFVC-IFLLPLVTLQSN-ILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST- 402 (478)
Q Consensus 331 ~~~~~l~dr~G-----Rr~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~- 402 (478)
.+.|.++||++ ||+.+..+..+.+ +....+....+. .....+.+...+.....-...-.+..|..+ +.++.
T Consensus 78 ~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~ 156 (468)
T TIGR00788 78 PFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAG 156 (468)
T ss_pred HHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcC
Confidence 34889999996 6666666554442 222222221111 111112222222222222345677778887 44443
Q ss_pred --HHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhcccccc
Q 011756 403 --GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 457 (478)
Q Consensus 403 --~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~ 457 (478)
..++......+|..+++.+.+.+.+..++...+.+.+++.++. ....++.||.+
T Consensus 157 ~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~-~~~~~~~~E~~ 212 (468)
T TIGR00788 157 PSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQ-LFVSNLSKERR 212 (468)
T ss_pred CCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHH-HHHHHhccccc
Confidence 3444445455788888888887776656666676766666665 33445557764
No 228
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.45 E-value=0.015 Score=56.51 Aligned_cols=103 Identities=17% Similarity=0.152 Sum_probs=68.6
Q ss_pred hhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---hhchhHHHHHHHHHHHHHhhhh-hhhhhhhcccccCcCh
Q 011756 324 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---TLQSNILLTALLSGARMFSMGT-FIIANIFAPEIYPTSM 399 (478)
Q Consensus 324 ~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~E~~p~~~ 399 (478)
.+.....+-.+++.+|+|+|+-++.+..+.++....+. ...+.......++... ...+. -...+.+.+.+.|.+.
T Consensus 59 ~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila-~Gi~~LetaaNp~v~~lg~~~~ 137 (422)
T COG0738 59 GGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILA-SGIGLLETAANPYVTLLGKPES 137 (422)
T ss_pred HHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHH-hhhHHHHhccchHHHHhCCchh
Confidence 45566778888999999999998888776655433332 1111111111111111 11111 2345778888888888
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHhh
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLVT 427 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~~ 427 (478)
.+.=..++..+..+|++++|.+...++.
T Consensus 138 a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 138 AAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 8888899999999999999999888776
No 229
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.29 E-value=0.0022 Score=65.34 Aligned_cols=139 Identities=17% Similarity=0.174 Sum_probs=96.8
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcCh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 399 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~ 399 (478)
.+..++.++|.+.++.+.||+.-.+.+..+.+..+++.+.....++.+...++-+..+.+=.+.++..-.+.+--|..+.
T Consensus 88 t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e 167 (495)
T KOG2533|consen 88 TVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE 167 (495)
T ss_pred HHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh
Confidence 34456788899999999999996665555444444333222223333333344344444444567777888999999999
Q ss_pred hHHHHHHHHHHHhHhHhHHHHHHHHHhh------ccchhHHHHHHHHHHHHHHHHHHhccccccC
Q 011756 400 RSTGAGVAYAVGRIGGMVCPLVAVGLVT------SCHQTAAILLLEALIVLSVVVILLIPFETKG 458 (478)
Q Consensus 400 R~~~~g~~~~~~~lg~~~~p~~~~~l~~------~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g 458 (478)
|++-+|+-++.+.+|+++++.+...+.. ..++.+.|++-+++.++.++++++++|+-..
T Consensus 168 ~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 168 RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 9999999999999999999998877532 1234567788888888888888888876443
No 230
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.26 E-value=0.26 Score=49.57 Aligned_cols=60 Identities=12% Similarity=0.042 Sum_probs=44.2
Q ss_pred hchHHHHHHHHHHhhcccCchhhH-HHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 011756 95 SPNYISLLILRGLAGAGLGSGHVF-FSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAW 154 (478)
Q Consensus 95 a~~~~~l~~~R~l~Gig~g~~~~~-~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~ 154 (478)
-+|=..+++.-.+.|+|.+..+.. ..|++|.++++.+.+..++.=.....+.++|+.+-.
T Consensus 99 ~~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~ 159 (461)
T KOG3098|consen 99 FPNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILF 159 (461)
T ss_pred hcchHHHHHHHHHhhhhHHheecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhhe
Confidence 466677889999999988765544 468999999999999887765555556566555443
No 231
>PRK09669 putative symporter YagG; Provisional
Probab=97.19 E-value=0.0057 Score=62.16 Aligned_cols=105 Identities=16% Similarity=0.109 Sum_probs=58.0
Q ss_pred HhhhhhHHHHHHHHHhh----hchHHH-HHHHHHHHHHHHHHHHhhc----hh--HHHHHHHHHHHHHhhhhhhhhhhhc
Q 011756 323 SFAELPGLLTAALLVDR----VGRKLS-MTIMFIFVCIFLLPLVTLQ----SN--ILLTALLSGARMFSMGTFIIANIFA 391 (478)
Q Consensus 323 ~~~~~~g~~~~~~l~dr----~GRr~~-~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~g~~~~~~~~~ 391 (478)
.+...+...+.|+++|| +|||+. +.++....++......... .. ....+..............+...+.
T Consensus 55 ~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~ 134 (444)
T PRK09669 55 RVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMP 134 (444)
T ss_pred HHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhH
Confidence 34455566778899998 677655 4455444433332222111 11 1111111111111112233446788
Q ss_pred cccc-CcChhHHHHHHHHHHHhHhHhHHHHHHHHHhh
Q 011756 392 PEIY-PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 427 (478)
Q Consensus 392 ~E~~-p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~ 427 (478)
+|+. +.+.|++..++-..++.+|+.+++.+..++..
T Consensus 135 ~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~ 171 (444)
T PRK09669 135 GAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVD 171 (444)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887 45789999999888888888888766555543
No 232
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.18 E-value=0.027 Score=56.24 Aligned_cols=81 Identities=19% Similarity=0.372 Sum_probs=59.1
Q ss_pred HHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHH-HHHHHHHHHHHHHHHhcCcc------hHHHHHHhhHHHHHH
Q 011756 105 RGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTF-WTFGSVSEAALAWIVMPILT------WRWLLALSAIPAFVL 176 (478)
Q Consensus 105 R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~------WR~~f~i~~i~~~l~ 176 (478)
-.+.|+..|... ....|+.|..|++.|++..+++... .++|..+++.+++.+.++.| |...+.+.+...++.
T Consensus 308 q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~ 387 (400)
T PF03825_consen 308 QLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVI 387 (400)
T ss_pred HhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHH
Confidence 456898888764 5567899999999999999998874 68999999999998876543 556666665544444
Q ss_pred HH-HHHhcCC
Q 011756 177 LI-FIVFMPE 185 (478)
Q Consensus 177 ~~-~~~~lpE 185 (478)
.+ +..+++|
T Consensus 388 ~~~f~~~fk~ 397 (400)
T PF03825_consen 388 LVLFVILFKP 397 (400)
T ss_pred HHHHHhhccC
Confidence 33 3334444
No 233
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.14 E-value=0.028 Score=52.79 Aligned_cols=137 Identities=28% Similarity=0.357 Sum_probs=87.9
Q ss_pred HHHHHHHHHHhHHhhhhhcCCCc--chhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhch--
Q 011756 39 EAMEVMILSFVGPAVKSEWGLSS--SEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFSPN-- 97 (478)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a~~-- 97 (478)
...+........+....+++.+. .+.++..+...++... +..+......+.+..++..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (338)
T COG0477 14 LGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVG 93 (338)
T ss_pred HHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccch
Confidence 33555555556666666665444 3556665555443222 11122112333455566665
Q ss_pred HHHHHHHHHHhhcccCch-hhHHHHHhhccCC-CCchhHHHHHHH-HHHHHHHHHHHHHHHHhc--CcchHHHHHHhhHH
Q 011756 98 YISLLILRGLAGAGLGSG-HVFFSWFMEFVPP-SNRGKWMVVFST-FWTFGSVSEAALAWIVMP--ILTWRWLLALSAIP 172 (478)
Q Consensus 98 ~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~-~~Rg~~~~~~~~-~~~~G~~~~~~~~~~~~~--~~~WR~~f~i~~i~ 172 (478)
...+++.|++.|++.|.. +....++.|+.|+ ++|+...+.... ...+|.++++.++..+.. ..+||..|.+....
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALL 173 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 899999999999988865 4556788999998 789999888888 577888888766655433 36899977666655
Q ss_pred HHH
Q 011756 173 AFV 175 (478)
Q Consensus 173 ~~l 175 (478)
...
T Consensus 174 ~~~ 176 (338)
T COG0477 174 GLL 176 (338)
T ss_pred HHH
Confidence 543
No 234
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.11 E-value=0.0022 Score=64.88 Aligned_cols=128 Identities=17% Similarity=0.122 Sum_probs=73.0
Q ss_pred hHHHHHHHHHh----hhchHHHHH-HHHHHHHHHHHHHHhhch----hH---HH-HHHHHHHHHHhhhhhhhhhhhcccc
Q 011756 328 PGLLTAALLVD----RVGRKLSMT-IMFIFVCIFLLPLVTLQS----NI---LL-TALLSGARMFSMGTFIIANIFAPEI 394 (478)
Q Consensus 328 ~g~~~~~~l~d----r~GRr~~~~-~~~~~~~~~~~~~~~~~~----~~---~~-~~~~~~~~~~~~g~~~~~~~~~~E~ 394 (478)
+.-.+.|.++| |+|||+..+ ++....++....+....+ .. .. .+..+...........+..++.+|+
T Consensus 52 i~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~l 131 (428)
T PF13347_consen 52 ITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPEL 131 (428)
T ss_pred hcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccc
Confidence 33447778999 789888654 455555544433332211 11 11 1111111111122233457789999
Q ss_pred cCc-ChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccc-------hhHHHHHHHHHHHHHHHHHHhcccc
Q 011756 395 YPT-SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-------QTAAILLLEALIVLSVVVILLIPFE 455 (478)
Q Consensus 395 ~p~-~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~pe 455 (478)
.+. +.|.+..+.-..++.+|+.+...+.+.+....+ ......+++++..++.++..+..+|
T Consensus 132 t~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 132 TPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred cccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 985 789999999999998888766666666554332 1223345555556666666666667
No 235
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.00 E-value=0.15 Score=49.04 Aligned_cols=134 Identities=19% Similarity=0.108 Sum_probs=64.1
Q ss_pred hhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhh-----hhhhcccccCcCh
Q 011756 325 AELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFII-----ANIFAPEIYPTSM 399 (478)
Q Consensus 325 ~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-----~~~~~~E~~p~~~ 399 (478)
...+-..+.|.+.||+|||+..+...+.-++..+.-.......+...-+..+. ...-.+.. ..-+-..-+|.+.
T Consensus 81 Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~~~~~~L~~GRvlgGi-aTSLLfS~FEsW~V~Eh~~~g~~~~~ 159 (354)
T PF05631_consen 81 SSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHSSNYPVLLLGRVLGGI-ATSLLFSAFESWMVHEHNKRGFPQEW 159 (354)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCChHH
Confidence 34444566778999999999876544443333332221111111111111111 01111111 1112234467776
Q ss_pred hHHHHHHHHHHH-hHhHhHHHHHHHHHhhcc--chhHHHHHHHHHHHHHHHHHHhccccccCc
Q 011756 400 RSTGAGVAYAVG-RIGGMVCPLVAVGLVTSC--HQTAAILLLEALIVLSVVVILLIPFETKGK 459 (478)
Q Consensus 400 R~~~~g~~~~~~-~lg~~~~p~~~~~l~~~~--~~~~~~~~~~~~~~i~~~~~~~~~pet~g~ 459 (478)
.+.-.+.+...+ .+-++.+..+...+.+.. ++..+|..-..+.+++.+++...-+|..|.
T Consensus 160 L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 160 LSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGD 222 (354)
T ss_pred HHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCC
Confidence 666666555333 344555555544444333 234566665566666666665544676554
No 236
>PRK10429 melibiose:sodium symporter; Provisional
Probab=96.99 E-value=0.023 Score=58.23 Aligned_cols=102 Identities=12% Similarity=0.000 Sum_probs=56.4
Q ss_pred hhhhhHHHHHHHHHh----hhchHHH-HHHHHHHHHHHHHHHHhhc--hhH--HHHHH-H-HHHHHHhhhhhhhhhhhcc
Q 011756 324 FAELPGLLTAALLVD----RVGRKLS-MTIMFIFVCIFLLPLVTLQ--SNI--LLTAL-L-SGARMFSMGTFIIANIFAP 392 (478)
Q Consensus 324 ~~~~~g~~~~~~l~d----r~GRr~~-~~~~~~~~~~~~~~~~~~~--~~~--~~~~~-~-~~~~~~~~g~~~~~~~~~~ 392 (478)
+...+.-.+.|+++| |+|||+. +.++...+++....+.... +.. ....+ . .....+......+..++.+
T Consensus 53 i~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~ 132 (473)
T PRK10429 53 IWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVP 132 (473)
T ss_pred HHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhH
Confidence 444556667889999 5599654 4555555444433222211 111 11111 1 1111111122334567888
Q ss_pred ccc-CcChhHHHHHHHHHHHhHhHhHHHHHHHHH
Q 011756 393 EIY-PTSMRSTGAGVAYAVGRIGGMVCPLVAVGL 425 (478)
Q Consensus 393 E~~-p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l 425 (478)
|+- +.+.|....++-..++.+|+.+.+.+..++
T Consensus 133 ~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~ 166 (473)
T PRK10429 133 TLTLDKREREQLVPYPRFFASLAGFVTAGFTLPF 166 (473)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988 579999999987777888777766554444
No 237
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=96.96 E-value=0.015 Score=55.15 Aligned_cols=99 Identities=17% Similarity=0.308 Sum_probs=68.5
Q ss_pred HhhhchHHHHHHHHHHhhcccCchhhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcC--cchHHHHHHh
Q 011756 92 SAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPI--LTWRWLLALS 169 (478)
Q Consensus 92 ~~~a~~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~--~~WR~~f~i~ 169 (478)
.-+.++...+=+.-+..|...+.....++|+-+..+|+++.++.+......-.|...++.++-.+... .+.+.+=.+.
T Consensus 89 lv~g~sV~~mQvlE~FyG~~tAaEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~IS 168 (433)
T KOG3810|consen 89 LVFGPSVKAMQVLEFFYGPATAAEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYIS 168 (433)
T ss_pred HHhcCCchheeeehhhcChHHHHHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhh
Confidence 34556777777777777766665555677888999999999999999988888988888888776543 3455544444
Q ss_pred hHHHHHHHHHHHhcCCCchhh
Q 011756 170 AIPAFVLLIFIVFMPESPRYL 190 (478)
Q Consensus 170 ~i~~~l~~~~~~~lpESP~~l 190 (478)
-....+.....+++|..||-+
T Consensus 169 L~~~~ia~~~A~fLP~v~rSl 189 (433)
T KOG3810|consen 169 LAEVTIAVLLALFLPRVKRSL 189 (433)
T ss_pred HHHHHHHHHHHhhCCCCchhh
Confidence 333344455566777666533
No 238
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.96 E-value=0.013 Score=58.88 Aligned_cols=127 Identities=12% Similarity=0.119 Sum_probs=83.1
Q ss_pred HHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChh
Q 011756 321 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 400 (478)
Q Consensus 321 ~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R 400 (478)
+.-.+.++...+.+.++.|+|+-+++..+..+...=++.+...+++|...-+-+.........|..+-+|.+...|++.|
T Consensus 414 ~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~ 493 (618)
T KOG3762|consen 414 LCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLR 493 (618)
T ss_pred hhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcch
Confidence 34456788888999999999999988877666555455555555666444343444444445566777899999999999
Q ss_pred HHHHHHHHHHHh-HhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 011756 401 STGAGVAYAVGR-IGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVV 447 (478)
Q Consensus 401 ~~~~g~~~~~~~-lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~ 447 (478)
++++|+....-. +|-.++.++.+.+....+....|.+++..+++.++
T Consensus 494 at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~ 541 (618)
T KOG3762|consen 494 ATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLA 541 (618)
T ss_pred HHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHH
Confidence 999999877653 33334444444445555544555555554444433
No 239
>PRK09848 glucuronide transporter; Provisional
Probab=96.89 E-value=0.078 Score=53.90 Aligned_cols=79 Identities=20% Similarity=0.172 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHhhh--chHHHHHHHHHHhhcccCchh-hHHHHHhhccCCC-------CchhHHHHHHHHHHHHHHH
Q 011756 79 LGGALVTFVAGLLSAFS--PNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPS-------NRGKWMVVFSTFWTFGSVS 148 (478)
Q Consensus 79 ~~~~~~~~i~~~~~~~a--~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~-------~Rg~~~~~~~~~~~~G~~~ 148 (478)
..+.++..++.+...+. ++++.+++.-++.|+|.+... ...+...|..|.+ ++|...+..+....+|..+
T Consensus 298 ~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~ai 377 (448)
T PRK09848 298 LIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAI 377 (448)
T ss_pred HHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHH
Confidence 33444444444444443 356677778888898887653 4445566666543 4699999999999999999
Q ss_pred HHHHHHHHh
Q 011756 149 EAALAWIVM 157 (478)
Q Consensus 149 ~~~~~~~~~ 157 (478)
++.+...+.
T Consensus 378 g~~i~g~~l 386 (448)
T PRK09848 378 GGSIPAFIL 386 (448)
T ss_pred HHHHHHHHH
Confidence 888776554
No 240
>PRK11462 putative transporter; Provisional
Probab=96.85 E-value=0.04 Score=56.24 Aligned_cols=103 Identities=16% Similarity=0.108 Sum_probs=59.4
Q ss_pred hhhHHHHHHHHHhh----hchHHHHH-HHHHHHHHHHHHHHhhc--h--h-HHHHH-HHHHHHHHhhhhhhhhhhhcccc
Q 011756 326 ELPGLLTAALLVDR----VGRKLSMT-IMFIFVCIFLLPLVTLQ--S--N-ILLTA-LLSGARMFSMGTFIIANIFAPEI 394 (478)
Q Consensus 326 ~~~g~~~~~~l~dr----~GRr~~~~-~~~~~~~~~~~~~~~~~--~--~-~~~~~-~~~~~~~~~~g~~~~~~~~~~E~ 394 (478)
-.+.-.+.|+++|| +|||+..+ ++....++....+.... + . ..... .......+......+.+++.+|+
T Consensus 58 Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~l 137 (460)
T PRK11462 58 DAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVI 137 (460)
T ss_pred HHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHh
Confidence 34455677899996 58877544 45444443333222111 1 1 11111 11111111122223456788898
Q ss_pred cC-cChhHHHHHHHHHHHhHhHhHHHHHHHHHhhc
Q 011756 395 YP-TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 428 (478)
Q Consensus 395 ~p-~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~ 428 (478)
-+ .+.|++..++-...+.+|+.+++.+..++...
T Consensus 138 t~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~ 172 (460)
T PRK11462 138 TNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNL 172 (460)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87 68999999999999999988888776665543
No 241
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.80 E-value=0.44 Score=47.83 Aligned_cols=102 Identities=17% Similarity=0.174 Sum_probs=61.8
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHH----HHHHHhhchh--HHHHHHHHHHHHHh-hhhhh---hhhh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIF----LLPLVTLQSN--ILLTALLSGARMFS-MGTFI---IANI 389 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~-~g~~~---~~~~ 389 (478)
.+..+.++.|.+...++.+|+|-.+.=.++...-..+ ...+....++ ......++.+.... .|.|. ...-
T Consensus 300 ~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~q 379 (432)
T PF06963_consen 300 GLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQ 379 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 4556677888999999999999887655544322111 1122222211 22222222222222 23332 3467
Q ss_pred hcccccCcChhHHHHHHHHHHHhHhHhHHHHH
Q 011756 390 FAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLV 421 (478)
Q Consensus 390 ~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~ 421 (478)
+..|..|.+.||+-.|.=+...++...+.-.+
T Consensus 380 i~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 380 IMQENVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred hhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999877765443
No 242
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=96.79 E-value=0.1 Score=50.28 Aligned_cols=135 Identities=17% Similarity=0.189 Sum_probs=79.9
Q ss_pred HHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChh
Q 011756 321 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 400 (478)
Q Consensus 321 ~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R 400 (478)
....+..+|+...+.++|++|||+.....+...++....-....+.....++-... .+..|..+..-.+-.|..|...|
T Consensus 121 ~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~-~~g~gg~pv~~~~yle~lp~~~r 199 (528)
T KOG0253|consen 121 SVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALW-GFGVGGLPVDSAIYLEFLPSSHR 199 (528)
T ss_pred HHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHH-hccCCCccHhHHHHHHhccCcCC
Confidence 34466788889999999999999988777666655443322211111112222222 22334455555566699999999
Q ss_pred HHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccccC
Q 011756 401 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 458 (478)
Q Consensus 401 ~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g 458 (478)
.+-+-+. ++..+|..+...+.-..+...++. +.+++....+.-....+++.||..+
T Consensus 200 ~~~~V~~-~~waig~v~ea~law~vm~~~gwr-~~l~~~~~pl~~~a~f~~w~~ESpR 255 (528)
T KOG0253|consen 200 WLLTVMS-FFWAIGQVFEALLAWGVMSNFGWR-YLLFTSSTPLMFAARFLVWVYESPR 255 (528)
T ss_pred CcchhHH-HHHHHHHHHHHHHHHHHHHhhhHH-HHHHHHHhHHHHHHHHHhhcccCcc
Confidence 9988777 666677777766554444444433 3333333333334455666778654
No 243
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.71 E-value=0.36 Score=49.02 Aligned_cols=41 Identities=7% Similarity=-0.164 Sum_probs=37.4
Q ss_pred hhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHh
Q 011756 386 IANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV 426 (478)
Q Consensus 386 ~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~ 426 (478)
..|.+.+|+++.+.-.+-.++....+++|.++++.+...+.
T Consensus 149 lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 149 LFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67999999999999999999999999999999998877654
No 244
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=96.66 E-value=0.07 Score=52.31 Aligned_cols=160 Identities=19% Similarity=0.247 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHH----HHHH-------------HHHHHHHHHH
Q 011756 25 QGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFA----GMMS-------------ILGGALVTFV 87 (478)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~----G~~~-------------~~~~~~~~~i 87 (478)
+...++++- -...|+.+. .+++...--..++|+++.|..++.-...+ |..+ +..+.++.++
T Consensus 253 ~i~~FLiA~-~~~~DGv~t-il~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~ 330 (438)
T COG2270 253 NLVLFLIAR-FFYIDGVNT-ILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSI 330 (438)
T ss_pred chHHHHHHH-HHHHhhHHH-HHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHH
Confidence 334444443 335677763 44444444456999999998776554432 2222 4555556666
Q ss_pred HHHHHhhhchHHHHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcC-cchHHH
Q 011756 88 AGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPI-LTWRWL 165 (478)
Q Consensus 88 ~~~~~~~a~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~-~~WR~~ 165 (478)
.++..-+...-..+.++=.+.|...|+.. ..-+|+.+..|+++-|+..++++..--.+..++|.+...+.+. .+=|.-
T Consensus 331 ~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g 410 (438)
T COG2270 331 AALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAG 410 (438)
T ss_pred HHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhH
Confidence 65555555555566677788899888864 4568999999999999999999999988999999887766543 345666
Q ss_pred HHHhhHHHHHHHHHHHhcCCC
Q 011756 166 LALSAIPAFVLLIFIVFMPES 186 (478)
Q Consensus 166 f~i~~i~~~l~~~~~~~lpES 186 (478)
+....+...+-++..+++|+.
T Consensus 411 ~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 411 VLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHHHhhHhhEEeecCC
Confidence 555554444445555566653
No 245
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=96.40 E-value=0.031 Score=55.23 Aligned_cols=161 Identities=15% Similarity=0.106 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHH--H------------HHHH-------------
Q 011756 25 QGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVF--A------------GMMS------------- 77 (478)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~--~------------G~~~------------- 77 (478)
|.+-++..+.-|++--......+.....+-+..+..+.+... -..+- . |+-+
T Consensus 302 hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~-~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~i 380 (538)
T KOG0252|consen 302 HGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTY-HELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYI 380 (538)
T ss_pred HHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchH-HHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHH
Confidence 445666666667664444444445555566656654443322 11110 0 1100
Q ss_pred HHHHHHHHHHHHHHHhhhch-H-------HHHHHHHHHhhcccCchhhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHH
Q 011756 78 ILGGALVTFVAGLLSAFSPN-Y-------ISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 149 (478)
Q Consensus 78 ~~~~~~~~~i~~~~~~~a~~-~-------~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~ 149 (478)
.+.+..++.+..+..+...| . ....+.-++.-+|-+.. ...+-+|.+|.+.||..-++....--.|.+++
T Consensus 381 q~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~t--tfivpaE~FParvR~t~hGIsAA~GK~GAivg 458 (538)
T KOG0252|consen 381 QLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNAT--TFIVPAEIFPARVRSTCHGISAASGKAGAIVG 458 (538)
T ss_pred HHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCce--eEEeehhhchHHHhhhhhhHHHHhccchHHHH
Confidence 34455566666666666666 1 22333333443444332 22235899999999999999999988999988
Q ss_pred HHHHHHHhc-----CcchHHHHHHhhHHHHHHHHHHHhcCCCch
Q 011756 150 AALAWIVMP-----ILTWRWLLALSAIPAFVLLIFIVFMPESPR 188 (478)
Q Consensus 150 ~~~~~~~~~-----~~~WR~~f~i~~i~~~l~~~~~~~lpESP~ 188 (478)
......+.+ ..+-|+.|++.+...++..+..+++|||.+
T Consensus 459 ~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~ 502 (538)
T KOG0252|consen 459 AFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKG 502 (538)
T ss_pred HHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccc
Confidence 877766665 568999999998888888888888999843
No 246
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=96.26 E-value=0.24 Score=47.69 Aligned_cols=126 Identities=16% Similarity=0.147 Sum_probs=75.2
Q ss_pred HHHHHHHHhHHhhhh--hcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhchHHHH
Q 011756 41 MEVMILSFVGPAVKS--EWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFSPNYISL 101 (478)
Q Consensus 41 ~~~~~~~~~~~~~~~--~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a~~~~~l 101 (478)
.|....+.....+++ .+|+++++.+...+.+..++++ +..+..+..++.++....++...+
T Consensus 155 ~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~ 234 (310)
T TIGR01272 155 AEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM 234 (310)
T ss_pred HHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 555554444444442 3689999999888887666554 222222333333333333333222
Q ss_pred HHHHHHhhcccCch-hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHh
Q 011756 102 LILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALS 169 (478)
Q Consensus 102 ~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~ 169 (478)
.+=++.|++.+.. +...+...|..|++ .++..++.. ...+|..+.|.+.+.+.+..|-|..|++.
T Consensus 235 -~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~~-~~~~Gg~i~P~l~G~lad~~g~~~a~~v~ 300 (310)
T TIGR01272 235 -WFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGILC-LAIVGGAIVPLLQGSLADCLGIQLAFALP 300 (310)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHHH-HHHhcchHHHHHHHHHHHhccchHHHHHH
Confidence 3444677777665 34456666766654 556667654 45578888998888888888888887743
No 247
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=96.23 E-value=0.15 Score=51.25 Aligned_cols=136 Identities=17% Similarity=0.108 Sum_probs=72.8
Q ss_pred hhhHHHHHHHHHhh----hchHHHH-HHHHHHHHHHHHHHHhhc-----hhHH-HHHHHHHHHHHhhhhhhhhhhhcccc
Q 011756 326 ELPGLLTAALLVDR----VGRKLSM-TIMFIFVCIFLLPLVTLQ-----SNIL-LTALLSGARMFSMGTFIIANIFAPEI 394 (478)
Q Consensus 326 ~~~g~~~~~~l~dr----~GRr~~~-~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~g~~~~~~~~~~E~ 394 (478)
-.+.-.+.|.++|| +|||+.. +++.+..++......... .... ..+.......+....+-+..++.+|+
T Consensus 61 DAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~i 140 (467)
T COG2211 61 DAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEI 140 (467)
T ss_pred HHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhh
Confidence 34455667788886 5777654 445444443332222211 1111 11111222222223334456788888
Q ss_pred cCc-ChhHHHHHHHHHHHhHhHhHHHHHHHHHhhccch---h-HHHHHHHHHHHHHHHHHHhccccccCccc
Q 011756 395 YPT-SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQ---T-AAILLLEALIVLSVVVILLIPFETKGKEL 461 (478)
Q Consensus 395 ~p~-~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~---~-~~~~~~~~~~~i~~~~~~~~~pet~g~~l 461 (478)
-+. +.|.+..+.=..++.+|+.+...+.+++....+. . +.......+++++.+..+++...+|.|..
T Consensus 141 T~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~ 212 (467)
T COG2211 141 TQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVV 212 (467)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence 654 8899999999999999988888887777654332 1 22223333444444444444445555554
No 248
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.22 E-value=0.023 Score=42.49 Aligned_cols=62 Identities=16% Similarity=0.290 Sum_probs=47.5
Q ss_pred HHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhchHHHH
Q 011756 40 AMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGALVTFVAGLLSAFSPNYISL 101 (478)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~~~~~i~~~~~~~a~~~~~l 101 (478)
+.-|+..+...|.+++|.++|.++.|++.|.-++|+.+ +..+.+...+..+.+++..++..+
T Consensus 5 GigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred hhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 46688888899999999999999999999999988776 334455555566666666665443
No 249
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.16 E-value=0.2 Score=53.25 Aligned_cols=121 Identities=16% Similarity=0.163 Sum_probs=65.8
Q ss_pred HHHHHHHHhh-hchHHHHHHHHHHHHHHHHHHHhhc-h----hHHHHHHHHHHHHH--hhhh-hhhhhhhcccccCcC--
Q 011756 330 LLTAALLVDR-VGRKLSMTIMFIFVCIFLLPLVTLQ-S----NILLTALLSGARMF--SMGT-FIIANIFAPEIYPTS-- 398 (478)
Q Consensus 330 ~~~~~~l~dr-~GRr~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~--~~g~-~~~~~~~~~E~~p~~-- 398 (478)
.+++++++|+ +||++.+..+.++..+....+.... . .......+...... ..|. -+.......|.++.+
T Consensus 40 pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~ 119 (654)
T TIGR00926 40 PLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL 119 (654)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccch
Confidence 4677788885 6999988776655433222222110 0 11111111111111 1121 133455666777643
Q ss_pred -hhHHHHHHHHHHHhHhHhHHHHHHHHHhhcc-------chhHHHHHHHHHHHHHHHHHH
Q 011756 399 -MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC-------HQTAAILLLEALIVLSVVVIL 450 (478)
Q Consensus 399 -~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~-------~~~~~~~~~~~~~~i~~~~~~ 450 (478)
.|-....+.+..+++|+.+++.+.+.+.+.. ++...|.+.+++.+++.++..
T Consensus 120 ~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 120 SLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFM 179 (654)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999999999998877665332 133445555555555544433
No 250
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=95.84 E-value=0.088 Score=53.25 Aligned_cols=129 Identities=26% Similarity=0.254 Sum_probs=75.7
Q ss_pred HHHHHHHhhh-----chHHHHHHHHHHHHHHHHHHHhh-c---hhHHHHHHHHHHHHHhhhhhhhhhhhccccc---CcC
Q 011756 331 LTAALLVDRV-----GRKLSMTIMFIFVCIFLLPLVTL-Q---SNILLTALLSGARMFSMGTFIIANIFAPEIY---PTS 398 (478)
Q Consensus 331 ~~~~~l~dr~-----GRr~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~---p~~ 398 (478)
.+.|.++|-+ .||+-+.++..++.+..+.+... . +......+++...+.....-...-....|.. |.+
T Consensus 42 p~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~ 121 (433)
T PF03092_consen 42 PLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES 121 (433)
T ss_pred hhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch
Confidence 4677899976 34555566665554433333321 1 1112222222222222222223344555654 555
Q ss_pred hhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccccCcc
Q 011756 399 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKE 460 (478)
Q Consensus 399 ~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g~~ 460 (478)
|+.-++.+..+..+|++++..+.+++.+..+....+.+.+++..+..+..+++.+|.+.++
T Consensus 122 -~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~~ 182 (433)
T PF03092_consen 122 -RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEERKVRP 182 (433)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhhccccc
Confidence 8888999999888999999888888877766555666666676777677777777744333
No 251
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=95.70 E-value=1.3 Score=43.58 Aligned_cols=170 Identities=18% Similarity=0.131 Sum_probs=104.5
Q ss_pred ccccccHHHHHHhcCCchHHHHHHHHHHHHHH-HHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-------
Q 011756 6 QRLVYTLDEALTFMGFGKFQGLALAYSGLGWF-SEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS------- 77 (478)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~------- 77 (478)
++++.++.+...+.--++.-.+.+.+.+++.+ +..-|.. ..|.=.+-||+|..|.+.+++....|..+
T Consensus 191 ~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~i----LEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~ 266 (403)
T PF03209_consen 191 ERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVI----LEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGF 266 (403)
T ss_pred CCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHH----cCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777766654322222222333333332 2233321 22333445899988888777776555433
Q ss_pred -----------HHHHHHHHHH---HHHHHhhhchHHHHHHHHHHhhcccCchhh-HHHHHhhccCCCCchhHHHHHHHHH
Q 011756 78 -----------ILGGALVTFV---AGLLSAFSPNYISLLILRGLAGAGLGSGHV-FFSWFMEFVPPSNRGKWMVVFSTFW 142 (478)
Q Consensus 78 -----------~~~~~~~~~i---~~~~~~~a~~~~~l~~~R~l~Gig~g~~~~-~~~~~~E~~p~~~Rg~~~~~~~~~~ 142 (478)
...++....+ .-+..+...+.+.|-..=++.|+|.|...+ ..+..-+..++++-|..++.|...+
T Consensus 267 ~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQ 346 (403)
T PF03209_consen 267 LLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQ 346 (403)
T ss_pred HhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHH
Confidence 1112212111 123455667888999999999999998754 3456778889999999999999998
Q ss_pred HHHHHHHHHHHHHHh----------cCcchHHHHHHhhHHHHHHHHH
Q 011756 143 TFGSVSEAALAWIVM----------PILTWRWLLALSAIPAFVLLIF 179 (478)
Q Consensus 143 ~~G~~~~~~~~~~~~----------~~~~WR~~f~i~~i~~~l~~~~ 179 (478)
.++.-++..++..+. +..++-.+|.++++.-++.+..
T Consensus 347 A~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~l 393 (403)
T PF03209_consen 347 AIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVL 393 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHH
Confidence 888777777766542 2346888888887655554443
No 252
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=95.67 E-value=2.2 Score=41.22 Aligned_cols=162 Identities=20% Similarity=0.207 Sum_probs=85.3
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH-----------------HHHHH
Q 011756 20 GFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS-----------------ILGGA 82 (478)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~-----------------~~~~~ 82 (478)
.+.++|+.-+..=.++..-|..+- ...-.+-+++|.+..|.+.+....+...++ .+..+
T Consensus 31 ~f~~Fqr~yl~vY~La~~aDWLQG----pY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~c 106 (354)
T PF05631_consen 31 AFRRFQRKYLLVYLLAMAADWLQG----PYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFC 106 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc----chhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHH
Confidence 356777765544445555555542 111123357899988877665544432222 23333
Q ss_pred HHHHHHHHHHhhhchHHHHHHHHHHhhcccCchhh-HHHH-HhhccCCCCchhH-HHHHHHHHHHH----HHHHHHHHHH
Q 011756 83 LVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHV-FFSW-FMEFVPPSNRGKW-MVVFSTFWTFG----SVSEAALAWI 155 (478)
Q Consensus 83 ~~~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~~~-~~~~-~~E~~p~~~Rg~~-~~~~~~~~~~G----~~~~~~~~~~ 155 (478)
++.++.+ ++-..+|+..++++|++.|++...... -=+| +.|+-.++.+... ...+.....++ .+.+.+++-.
T Consensus 107 ily~~sc-l~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~ 185 (354)
T PF05631_consen 107 ILYSLSC-LTKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANV 185 (354)
T ss_pred HHHHHHH-HHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHH
Confidence 3444444 345678999999999999988765433 3355 5787554433332 33333222122 2333344444
Q ss_pred HhcCcch--HHHHHHhhHHHHHHHHH-HHhcCCC
Q 011756 156 VMPILTW--RWLLALSAIPAFVLLIF-IVFMPES 186 (478)
Q Consensus 156 ~~~~~~W--R~~f~i~~i~~~l~~~~-~~~lpES 186 (478)
+.+..+- ..+|.......++..+. ...-+|.
T Consensus 186 l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~EN 219 (354)
T PF05631_consen 186 LADWFGFGPVAPFDAAIVLLAVAAVLILKTWPEN 219 (354)
T ss_pred HHHHhCCCCcchHHHHHHHHHHHHHHHHhccccc
Confidence 4443433 66777766555544333 3334453
No 253
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=95.20 E-value=0.15 Score=51.55 Aligned_cols=91 Identities=16% Similarity=0.154 Sum_probs=75.6
Q ss_pred HHHhhhchHHHHHHHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHH-HHHHHHHHHHHHHHHhcCcchHHHHH
Q 011756 90 LLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTF-WTFGSVSEAALAWIVMPILTWRWLLA 167 (478)
Q Consensus 90 ~~~~~a~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~WR~~f~ 167 (478)
+.....+|.|+.+-.-+++|+..+..+ ...+|++...||+.|..+.++.+.. .++|--+|+++++.+...++=|..|.
T Consensus 451 ~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~ 530 (618)
T KOG3762|consen 451 LYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFR 530 (618)
T ss_pred HHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHH
Confidence 344567899999999999999999886 4568999999999999999988875 67888889999998888889899998
Q ss_pred HhhHHHHHHHHHH
Q 011756 168 LSAIPAFVLLIFI 180 (478)
Q Consensus 168 i~~i~~~l~~~~~ 180 (478)
+.++-+++.++..
T Consensus 531 ~~giAcl~~l~~~ 543 (618)
T KOG3762|consen 531 IFGIACLVTLALF 543 (618)
T ss_pred HHHHHHHHHHHHH
Confidence 8877666554433
No 254
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=94.83 E-value=0.73 Score=42.92 Aligned_cols=126 Identities=14% Similarity=0.093 Sum_probs=74.8
Q ss_pred hhhhcCCCcchhhHHHHHHHH---------HHHH--------HHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCch
Q 011756 53 VKSEWGLSSSEESLITTVVFA---------GMMS--------ILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG 115 (478)
Q Consensus 53 ~~~~~~l~~~~~~~~~s~~~~---------G~~~--------~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~ 115 (478)
+++.||+|+.+.+.+.|.... |.+. .+.+..+..+.+= +...-++..=++.-.+.|+.....
T Consensus 291 F~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H-~~l~Ft~lsPy~~m~~lGLsysll 369 (459)
T KOG4686|consen 291 FQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGH-SGLFFTFLSPYTSMTFLGLSYSLL 369 (459)
T ss_pred HHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHh-hhHHhhhccHHHHHHHHhhhHHHH
Confidence 688899999999988876542 2221 1111111111110 011122222244455556554432
Q ss_pred h-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcc---hHHHHHHhhHHHHHHHHH
Q 011756 116 H-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILT---WRWLLALSAIPAFVLLIF 179 (478)
Q Consensus 116 ~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~---WR~~f~i~~i~~~l~~~~ 179 (478)
. .....++-..|.++-|++.+..+.-.++|..+.+++++.+.++.| |--.|++......+..+.
T Consensus 370 AcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svg 437 (459)
T KOG4686|consen 370 ACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVG 437 (459)
T ss_pred HHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHH
Confidence 2 223446778899999999999999999999999999998877543 655565554433333333
No 255
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=94.77 E-value=0.7 Score=45.88 Aligned_cols=108 Identities=16% Similarity=0.142 Sum_probs=62.4
Q ss_pred HHHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHH-HHHhhc----hhHHHHHHHHHHHHHhhhhhh----hhhhh
Q 011756 320 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLL-PLVTLQ----SNILLTALLSGARMFSMGTFI----IANIF 390 (478)
Q Consensus 320 ~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~g~~~----~~~~~ 390 (478)
.+..+.++|-.+.+.|+.||.|-|.....+....++-.. =..... +.....+..... .....+.+ .+.-.
T Consensus 86 mIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq-~iaa~Aq~Fim~lPski 164 (480)
T KOG2563|consen 86 MIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQ-SIAAAAQPFILGLPSKI 164 (480)
T ss_pred HHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhH-HHHHHhhhHhhccccHH
Confidence 444566777788899999999999988776654443221 111111 111111111111 11111111 11123
Q ss_pred cccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhhc
Q 011756 391 APEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 428 (478)
Q Consensus 391 ~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~ 428 (478)
..--||.++|++|..+....+.+|..++..+.+.+..+
T Consensus 165 A~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~ 202 (480)
T KOG2563|consen 165 AAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPS 202 (480)
T ss_pred HHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCC
Confidence 33458999999999999999899888887665544433
No 256
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=94.60 E-value=1.9 Score=39.77 Aligned_cols=56 Identities=14% Similarity=0.307 Sum_probs=37.1
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHhc-----CcchHHHHHHhhHHHHHHHHHHHhc
Q 011756 128 PSNRGKWMVVFSTFWTFGSVSEAALAWIVMP-----ILTWRWLLALSAIPAFVLLIFIVFM 183 (478)
Q Consensus 128 ~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~-----~~~WR~~f~i~~i~~~l~~~~~~~l 183 (478)
+|+|+..+.+-..++++|.++.-.....-.+ ..+||+++.+.++..++.++...++
T Consensus 1 ~k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 1 QKKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CCccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4678888888888899998875433221101 2469999988887766665555444
No 257
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=94.57 E-value=3.4 Score=40.06 Aligned_cols=154 Identities=16% Similarity=0.163 Sum_probs=85.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCcchhhHHHHHHHHHHHH------------------HHHHHHH
Q 011756 23 KFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGLSSSEESLITTVVFAGMMS------------------ILGGALV 84 (478)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~G~~~------------------~~~~~~~ 84 (478)
+.-|.+.++.++- ..-....-.=.|.+-.|-|+|+.+.|++.|...+.... .+...+.
T Consensus 208 ~~aW~vtLfmGlq----S~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~ 283 (395)
T COG2807 208 PLAWQVTLFMGLQ----SLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLL 283 (395)
T ss_pred chhHHHHHHHHhh----HHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 3345555555433 22222333347888888999999999988876443222 1222223
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHhhcccCch-hhHHHHHhhccC-CCCchhHHHHHHHHHHHHHHHHHHHHHHHhc-Ccc
Q 011756 85 TFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVP-PSNRGKWMVVFSTFWTFGSVSEAALAWIVMP-ILT 161 (478)
Q Consensus 85 ~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p-~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~-~~~ 161 (478)
+.++-....+.|.-..+.- -++.|+|.|+. +...+.+...++ +++-++.+++.|..-++=...+|.+.+.+-+ ..+
T Consensus 284 ~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gs 362 (395)
T COG2807 284 MLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGS 362 (395)
T ss_pred HHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCC
Confidence 3333222234444322222 38899998875 444455544433 4444566666554433333456667666644 357
Q ss_pred hHHHHHHhhHHHHHHHHHHH
Q 011756 162 WRWLLALSAIPAFVLLIFIV 181 (478)
Q Consensus 162 WR~~f~i~~i~~~l~~~~~~ 181 (478)
|+..........+++.+.-+
T Consensus 363 w~~~~~~l~~~~i~m~i~Gl 382 (395)
T COG2807 363 WSAPLVLLALATLLMLIFGL 382 (395)
T ss_pred hHHHHHHHHHHHHHHHHHHh
Confidence 99998877776666655433
No 258
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.40 E-value=0.18 Score=49.85 Aligned_cols=81 Identities=17% Similarity=0.132 Sum_probs=61.0
Q ss_pred HHHHHHHHHhhcccCch-hhHHHHHhhccCCCC---chhHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHH
Q 011756 99 ISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSN---RGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAF 174 (478)
Q Consensus 99 ~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~---Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~ 174 (478)
..++++-.+.++|.|+. +...+...|-.++++ |.+...++..+.++|.+++..+..++-++.||.+.|.+.++..+
T Consensus 34 ~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~ 113 (372)
T PF00854_consen 34 GLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGML 113 (372)
T ss_dssp CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHH
Confidence 57889999999999987 555677787777663 44455667778888988888877777788999999999877665
Q ss_pred HHHHH
Q 011756 175 VLLIF 179 (478)
Q Consensus 175 l~~~~ 179 (478)
+.++.
T Consensus 114 ~~~~~ 118 (372)
T PF00854_consen 114 LALIV 118 (372)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 259
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.32 E-value=1.5 Score=43.34 Aligned_cols=101 Identities=18% Similarity=0.113 Sum_probs=72.1
Q ss_pred hcCCCcchhhHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCchhh
Q 011756 56 EWGLSSSEESLITTVVFAGMMS------------------ILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHV 117 (478)
Q Consensus 56 ~~~l~~~~~~~~~s~~~~G~~~------------------~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~~~ 117 (478)
++.-..++.-+.+-.+.+|..+ +....++..+...+--+.+|++..++.=+..|+-.|..++
T Consensus 275 ~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YV 354 (402)
T PF02487_consen 275 SFFSPRDQYRWYQLLYQLGVFISRSSLPFFRIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYV 354 (402)
T ss_pred cCCCHHHHHHHHHHHHHHHHhhhhcceeeeehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHH
Confidence 3433456677888888888666 1111112222222333568888888999999987777776
Q ss_pred H-HHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 011756 118 F-FSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIV 156 (478)
Q Consensus 118 ~-~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~ 156 (478)
. ...+.|-.|+++|-..++....+-+.|.+++++++..+
T Consensus 355 NtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 355 NTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4 34467888999999999999999999999999988764
No 260
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=94.26 E-value=1.9 Score=36.69 Aligned_cols=97 Identities=13% Similarity=0.059 Sum_probs=59.6
Q ss_pred hhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHH-HHHHHhhhhhhhhhhhcccccCcChhHHH
Q 011756 325 AELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLS-GARMFSMGTFIIANIFAPEIYPTSMRSTG 403 (478)
Q Consensus 325 ~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~E~~p~~~R~~~ 403 (478)
...+..++.+.+.+++|.|+.++++.+.-.+........ .+....... ..++...-.|.....+..|..+.+.|++-
T Consensus 49 ~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~--~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~ 126 (156)
T PF05978_consen 49 SFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYP--NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRN 126 (156)
T ss_pred HHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhH
Confidence 345566788899999999999988876655544333222 222111111 11121222344455677788888889998
Q ss_pred HHHHHHHHhHhHhHHHHHHH
Q 011756 404 AGVAYAVGRIGGMVCPLVAV 423 (478)
Q Consensus 404 ~g~~~~~~~lg~~~~p~~~~ 423 (478)
.|+...+.+.+.+++..+..
T Consensus 127 ~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 127 TGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 88888887777666665443
No 261
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=94.13 E-value=1.4 Score=37.48 Aligned_cols=63 Identities=14% Similarity=0.209 Sum_probs=50.9
Q ss_pred hhchHHHHHHHHHHhhcccCchhhH-HHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 011756 94 FSPNYISLLILRGLAGAGLGSGHVF-FSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIV 156 (478)
Q Consensus 94 ~a~~~~~l~~~R~l~Gig~g~~~~~-~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~ 156 (478)
+-++.+.++.+-.+.|+|.+...++ ..|+.|.++++.|++..+++-.....+.+.|.++...+
T Consensus 85 ~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 85 FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4577889999999999998887654 56899999999999999887777777777777666554
No 262
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=93.78 E-value=1.8 Score=40.19 Aligned_cols=104 Identities=25% Similarity=0.256 Sum_probs=58.6
Q ss_pred HhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhch--hHHHHHHHHHHHHHhhhhhhhhhhhcccccCc-Ch
Q 011756 323 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS--NILLTALLSGARMFSMGTFIIANIFAPEIYPT-SM 399 (478)
Q Consensus 323 ~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~-~~ 399 (478)
.+....+.+..|.+.||.|||+.+..+........+....... ...................+....+.+|.+|. +.
T Consensus 49 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 128 (338)
T COG0477 49 FLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATE 128 (338)
T ss_pred HHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhH
Confidence 3444555688999999999997766655321111111112111 11111111111122223345567888899988 67
Q ss_pred hHHHHHHHHH-HHhHhHhHHHHHHHHHh
Q 011756 400 RSTGAGVAYA-VGRIGGMVCPLVAVGLV 426 (478)
Q Consensus 400 R~~~~g~~~~-~~~lg~~~~p~~~~~l~ 426 (478)
|+...+.... ...++..++|.+...+.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (338)
T COG0477 129 RGLAVGLVTLGAGALGLALGPLLAGLLL 156 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888887 46667777775554443
No 263
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=91.36 E-value=19 Score=36.97 Aligned_cols=42 Identities=14% Similarity=-0.056 Sum_probs=37.1
Q ss_pred hhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHhh
Q 011756 386 IANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 427 (478)
Q Consensus 386 ~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~~ 427 (478)
..|.+.+|..+.+...+-.++....+++|.+++..+...+-.
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999999999999999998877766554
No 264
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=90.63 E-value=8.5 Score=41.12 Aligned_cols=79 Identities=16% Similarity=0.130 Sum_probs=49.1
Q ss_pred HHHHHHHhhcccCch-hhHHHHHhhccCCCC---chhHHHHHHHHHHHHHHHHHHHHHHHhc-------CcchHHHHHHh
Q 011756 101 LLILRGLAGAGLGSG-HVFFSWFMEFVPPSN---RGKWMVVFSTFWTFGSVSEAALAWIVMP-------ILTWRWLLALS 169 (478)
Q Consensus 101 l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~---Rg~~~~~~~~~~~~G~~~~~~~~~~~~~-------~~~WR~~f~i~ 169 (478)
.+++=.+..+|.|+. +...+...|-.++++ |-....++..+.++|.++++.+...+.. ..+|...|.+.
T Consensus 88 ~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~ 167 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVP 167 (654)
T ss_pred HHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHH
Confidence 455556666677765 344455666666544 4445556666667777777766665542 23699999888
Q ss_pred hHHHHHHHHH
Q 011756 170 AIPAFVLLIF 179 (478)
Q Consensus 170 ~i~~~l~~~~ 179 (478)
++..++.++.
T Consensus 168 ~i~m~ia~lv 177 (654)
T TIGR00926 168 AILMILALIV 177 (654)
T ss_pred HHHHHHHHHH
Confidence 7666555443
No 265
>PF12832 MFS_1_like: MFS_1 like family
Probab=89.99 E-value=3.1 Score=30.54 Aligned_cols=33 Identities=12% Similarity=0.112 Sum_probs=25.8
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhhchHHHHHHHH
Q 011756 318 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMF 350 (478)
Q Consensus 318 ~~~~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~ 350 (478)
...+..+..+++..+.|.++||.+|++......
T Consensus 40 l~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~ 72 (77)
T PF12832_consen 40 LSAIRPLIRFLAPPLWGFLADKFGKRKVILLGS 72 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHH
Confidence 344555678889999999999999999766543
No 266
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=89.37 E-value=4.1 Score=41.38 Aligned_cols=133 Identities=18% Similarity=0.206 Sum_probs=70.9
Q ss_pred HHHhhhhhHHHHHHHHHhhhc--hHHHHHHHHHHHHHH-HHH--HHhhchhHHHHHHHH--HHHHHhhhhhhhhhhhccc
Q 011756 321 ITSFAELPGLLTAALLVDRVG--RKLSMTIMFIFVCIF-LLP--LVTLQSNILLTALLS--GARMFSMGTFIIANIFAPE 393 (478)
Q Consensus 321 ~~~~~~~~g~~~~~~l~dr~G--Rr~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~E 393 (478)
...++...+++..++-..|.+ ||+++. +.+++.+. ++. +....+.. ...+++ ...++..+.....-.|.+.
T Consensus 79 a~slg~~i~~liF~~Ws~k~~~~k~Pli~-s~ii~~~g~llY~~l~~~~~~~-~y~mL~~R~l~Gvg~~n~a~lR~Y~a~ 156 (488)
T KOG2325|consen 79 ASSLGHAIFSLIFGIWSNKTGSVKKPLIV-SFLIAIIGNLLYLALAYVPNGV-KYLMLVARILTGVGVGNFAVLRAYIAD 156 (488)
T ss_pred HHHHHHHhcchhhcccccccCCcccCHHH-HHHHHHHHHHHHHHHHhcccch-HHHHHHHHHHcCcCcccHHHHHHHHHh
Confidence 345667778888888888888 555544 44433332 222 12211111 121221 1112222333455678888
Q ss_pred ccCcChhHHHHHHHHHHHhHhHhHHHHHH---HHHhhcc---------c-hhHHHHHHHHHHHHHHHHHHhcccc
Q 011756 394 IYPTSMRSTGAGVAYAVGRIGGMVCPLVA---VGLVTSC---------H-QTAAILLLEALIVLSVVVILLIPFE 455 (478)
Q Consensus 394 ~~p~~~R~~~~g~~~~~~~lg~~~~p~~~---~~l~~~~---------~-~~~~~~~~~~~~~i~~~~~~~~~pe 455 (478)
.--.+.|.++++..+...-+|.++||.+- .++.+.. + .+.+-++.+...++..++..++..|
T Consensus 157 ~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E 231 (488)
T KOG2325|consen 157 ASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKE 231 (488)
T ss_pred ccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheee
Confidence 77778888887776664445555555332 2232111 1 2356667777777777777776655
No 267
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=88.37 E-value=32 Score=35.15 Aligned_cols=38 Identities=3% Similarity=-0.028 Sum_probs=33.4
Q ss_pred HHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 011756 120 SWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVM 157 (478)
Q Consensus 120 ~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~ 157 (478)
.+.+|.+++++=.|..+++..+.++|.++++.+...+.
T Consensus 152 ~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 152 GFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45799999999999999999999999999998776654
No 268
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=85.71 E-value=44 Score=34.01 Aligned_cols=37 Identities=5% Similarity=-0.018 Sum_probs=32.1
Q ss_pred HhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 011756 122 FMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP 158 (478)
Q Consensus 122 ~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~ 158 (478)
.+|.+..+|-+|..+.++.+.+++.++++.+...+..
T Consensus 173 aNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 173 ANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4789888999999999999999999998888777644
No 269
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=85.55 E-value=41 Score=33.56 Aligned_cols=123 Identities=15% Similarity=0.102 Sum_probs=60.5
Q ss_pred HHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHHHHH
Q 011756 331 LTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAV 410 (478)
Q Consensus 331 ~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~~~~ 410 (478)
+....+.|.+|.|++++.+.....+.-..+.+..+.....+.-+..+. ..+.-...+.|.--..|++.--++.+.+.+.
T Consensus 59 ~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~-~~a~evay~sYiys~v~~~~yq~vts~~raa 137 (412)
T PF01770_consen 59 LPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGL-ATAAEVAYYSYIYSVVDKEHYQKVTSYTRAA 137 (412)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHH-HHHHHHHHHHHheeecCHHHHHHHHHHHHHH
Confidence 445578999999999887665443333223332322222222111111 1122233456666667887777777777766
Q ss_pred HhHhHhHHHHHHHHHhhccch--hHHHHHHHHHHHHHHHHHHhccc
Q 011756 411 GRIGGMVCPLVAVGLVTSCHQ--TAAILLLEALIVLSVVVILLIPF 454 (478)
Q Consensus 411 ~~lg~~~~p~~~~~l~~~~~~--~~~~~~~~~~~~i~~~~~~~~~p 454 (478)
.-+|-.++..+.-.++...+. .....+-.+...++.++.+++++
T Consensus 138 ~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~ 183 (412)
T PF01770_consen 138 TLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPM 183 (412)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 666555555443323322221 11222222333455555566543
No 270
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=83.04 E-value=60 Score=33.40 Aligned_cols=39 Identities=10% Similarity=0.102 Sum_probs=33.3
Q ss_pred HHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 011756 120 SWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP 158 (478)
Q Consensus 120 ~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~ 158 (478)
.+.+|+++.+|=.|..+.+..+.++|.++++.+...+..
T Consensus 167 ~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 167 GFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346899999999999999999999999998877766544
No 271
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=82.19 E-value=24 Score=35.57 Aligned_cols=41 Identities=22% Similarity=0.152 Sum_probs=32.4
Q ss_pred hhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 011756 116 HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIV 156 (478)
Q Consensus 116 ~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~ 156 (478)
....-++.|..|+++||..+++-...+++--++...++...
T Consensus 375 L~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 375 LAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred HHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34445688999999999999999998888888766665543
No 272
>PRK03612 spermidine synthase; Provisional
Probab=81.81 E-value=69 Score=33.28 Aligned_cols=71 Identities=13% Similarity=0.094 Sum_probs=38.4
Q ss_pred HHHHHhhcccCchh-hHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHH-HhcCcc-hHHHHHHhhHHHH
Q 011756 103 ILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWI-VMPILT-WRWLLALSAIPAF 174 (478)
Q Consensus 103 ~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~-~~~~~~-WR~~f~i~~i~~~ 174 (478)
..-++.|+-.|+.. ....+..+.. .++-|+..+-......+|.++|+++..+ +.+..| ++..+.++.+-.+
T Consensus 115 ~~~~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~ 188 (521)
T PRK03612 115 VLVLLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLL 188 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 33445566566653 3333332221 2223555666667777888888887654 456666 5565555544333
No 273
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=79.44 E-value=15 Score=36.08 Aligned_cols=67 Identities=15% Similarity=0.109 Sum_probs=47.7
Q ss_pred hhhhhhcccccCcC---hhHHHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHh
Q 011756 385 IIANIFAPEIYPTS---MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILL 451 (478)
Q Consensus 385 ~~~~~~~~E~~p~~---~R~~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 451 (478)
+....+.+|.|+.+ .|..+..+.+..-++|+.+++...+++.+..++...|.+-.+..+++.+..+.
T Consensus 52 ~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 52 PNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 34566777888765 57888888899999999999988887776666666676666666666544443
No 274
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=78.54 E-value=26 Score=35.71 Aligned_cols=25 Identities=28% Similarity=0.430 Sum_probs=14.9
Q ss_pred HHHhhhchHHHHHHHH-HHHHHHHHH
Q 011756 335 LLVDRVGRKLSMTIMF-IFVCIFLLP 359 (478)
Q Consensus 335 ~l~dr~GRr~~~~~~~-~~~~~~~~~ 359 (478)
.-+.|+|||+..++-. .++++.++.
T Consensus 62 ~y~~~~GRRKSWiiP~Q~l~g~~m~~ 87 (544)
T PF13000_consen 62 VYSKRIGRRKSWIIPIQYLSGILMLY 87 (544)
T ss_pred hcccccCCcchhhhHHHHHHHHHHHH
Confidence 4455899999776533 444444433
No 275
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=70.95 E-value=42 Score=25.18 Aligned_cols=45 Identities=13% Similarity=0.104 Sum_probs=30.3
Q ss_pred HHHhhhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhch
Q 011756 321 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS 365 (478)
Q Consensus 321 ~~~~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~ 365 (478)
...+++++|.+...++.++.++|+.+..+.+.+.+..+.+...++
T Consensus 35 aNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~ 79 (85)
T PF06779_consen 35 ANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHS 79 (85)
T ss_pred HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 334667788888888878767777777777666666555554443
No 276
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=62.15 E-value=95 Score=31.59 Aligned_cols=96 Identities=11% Similarity=0.025 Sum_probs=61.2
Q ss_pred hhhhHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHH
Q 011756 325 AELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGA 404 (478)
Q Consensus 325 ~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~ 404 (478)
...+..++++.+.|++|-|..+.++...-..+-..+.+.. .+....--...++.....|.....|.+|..+.+.+.+-.
T Consensus 62 ~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N-~y~~yfssallG~Gaallw~GqG~ylt~~st~~tie~Ni 140 (461)
T KOG3098|consen 62 FFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPN-SYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETIERNI 140 (461)
T ss_pred HHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcc-hHHHHHHHHHhhhhHHheecccceehhhcCChhhHHHHH
Confidence 3455678899999999999999887665544433333322 221111111111111122444567888999999999999
Q ss_pred HHHHHHHhHhHhHHHHH
Q 011756 405 GVAYAVGRIGGMVCPLV 421 (478)
Q Consensus 405 g~~~~~~~lg~~~~p~~ 421 (478)
++..++++.+.+++..+
T Consensus 141 si~Wai~~~~li~Ggi~ 157 (461)
T KOG3098|consen 141 SIFWAIGQSSLIIGGII 157 (461)
T ss_pred HHHHHHHHHHHHhhhHh
Confidence 99999999877777544
No 277
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=58.51 E-value=42 Score=32.08 Aligned_cols=94 Identities=17% Similarity=0.056 Sum_probs=67.9
Q ss_pred hhhHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHhhhchHHHHHHHHHHhhcccCchhhHH-HHHh
Q 011756 63 EESLITTVVFAGMMS------------------ILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFF-SWFM 123 (478)
Q Consensus 63 ~~~~~~s~~~~G~~~------------------~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~~~~~-~~~~ 123 (478)
|.-|.+..+.+|..+ +....+++.+...+-.+.|+++..++.-+.-|+=-|+.++.. .-+.
T Consensus 289 qYRwyqvlYQlGVFiSRSS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~ 368 (409)
T KOG3880|consen 289 QYRWYQVLYQLGVFISRSSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIH 368 (409)
T ss_pred cchhhheeeeeeEEEEeccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHh
Confidence 456777777666333 333444555555666788999988888888887656666653 2356
Q ss_pred hccCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 011756 124 EFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIV 156 (478)
Q Consensus 124 E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~ 156 (478)
+-.++++|-.+++....+-++|..+++.++..+
T Consensus 369 ~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 369 KETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred hcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 667889999999999999999999988887543
No 278
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=57.56 E-value=39 Score=28.47 Aligned_cols=81 Identities=12% Similarity=0.120 Sum_probs=47.0
Q ss_pred HHHhhhchHHHHHHHHH-HHHH--HHHHHHh-hc---hhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcChhHHHHHHH
Q 011756 335 LLVDRVGRKLSMTIMFI-FVCI--FLLPLVT-LQ---SNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVA 407 (478)
Q Consensus 335 ~l~dr~GRr~~~~~~~~-~~~~--~~~~~~~-~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~E~~p~~~R~~~~g~~ 407 (478)
.++||+-||..+..+.- ..++ +...+.. .. +......++....+|..|..++.|-+.+-....+.-|+-.|+-
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gllGisYGilSaSWD~~r~GSllG~~ 135 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLLGISYGILSASWDPEREGSLLGWE 135 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcccHH
Confidence 46799999988766542 1121 1111111 11 1111223333344455666777888888888888888888887
Q ss_pred HHHHhHhH
Q 011756 408 YAVGRIGG 415 (478)
Q Consensus 408 ~~~~~lg~ 415 (478)
..--+++-
T Consensus 136 e~~~N~~r 143 (153)
T PF11947_consen 136 EFKRNWGR 143 (153)
T ss_pred HHHHhHHH
Confidence 77666543
No 279
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=53.74 E-value=1.8e+02 Score=26.84 Aligned_cols=32 Identities=13% Similarity=0.121 Sum_probs=19.4
Q ss_pred hhhhhHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 011756 324 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCI 355 (478)
Q Consensus 324 ~~~~~g~~~~~~l~dr~GRr~~~~~~~~~~~~ 355 (478)
+|...+.+.+-+++.|+.-|.+.+++..+..+
T Consensus 251 lCT~lAVigGk~lAskIS~rtVt~~ggi~Fi~ 282 (294)
T KOG2881|consen 251 LCTGLAVIGGKYLASKISVRTVTLIGGILFII 282 (294)
T ss_pred HHHHHHHhhhHHHhhhheeEEEEEecchhHHH
Confidence 34444555566788888888766655444433
No 280
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=49.83 E-value=6.3 Score=37.79 Aligned_cols=36 Identities=17% Similarity=0.225 Sum_probs=2.2
Q ss_pred hhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHH
Q 011756 385 IIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPL 420 (478)
Q Consensus 385 ~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~ 420 (478)
.....+.++..+.+.|..+-.++..+-.+|-.+|..
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ 302 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSV 302 (309)
T ss_dssp HHHH--------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356778888888888877766666555554444443
No 281
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=49.12 E-value=81 Score=21.59 Aligned_cols=47 Identities=11% Similarity=0.135 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHHHHHHhcCCCc
Q 011756 141 FWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESP 187 (478)
Q Consensus 141 ~~~~G~~~~~~~~~~~~~~~~WR~~f~i~~i~~~l~~~~~~~lpESP 187 (478)
+.-+|.+++.+.+......++.+....+..+.+++.......+|.+|
T Consensus 10 s~il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i~~~~ 56 (57)
T PF11151_consen 10 SFILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAVIPKKS 56 (57)
T ss_pred HHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 34455555555554444467888887888888877766666676654
No 282
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=45.54 E-value=3.7e+02 Score=27.84 Aligned_cols=42 Identities=19% Similarity=0.188 Sum_probs=30.5
Q ss_pred hhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHHHHHHh
Q 011756 385 IIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV 426 (478)
Q Consensus 385 ~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~~~~l~ 426 (478)
....++-+.+..+.+-||=+.+-|+++++||---..++..++
T Consensus 424 Vai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lV 465 (544)
T PF13000_consen 424 VAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLV 465 (544)
T ss_pred HHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHh
Confidence 344556668888999999999999999998754434444443
No 283
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=44.30 E-value=48 Score=26.60 Aligned_cols=31 Identities=13% Similarity=0.298 Sum_probs=17.6
Q ss_pred HHHHHhcCCCchhhhhcCChhHHHHHHHHHH
Q 011756 177 LIFIVFMPESPRYLCTKGRITDAHNILDKIA 207 (478)
Q Consensus 177 ~~~~~~lpESP~~l~~~~~~~~a~~~l~~~~ 207 (478)
++.++.+|+.|......+..+.+.+.++++.
T Consensus 57 i~l~~~lp~~P~~~~~~~~~~s~~~~l~~~~ 87 (118)
T PRK10697 57 IILSFALDPMPDNMAFGEQQPSSSELLDEVD 87 (118)
T ss_pred HHHHHhccCCcccccccccCCCHHHHHHHHH
Confidence 5566778887754333333445555555554
No 284
>TIGR02978 phageshock_pspC phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by Pfam model pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects.
Probab=39.83 E-value=80 Score=25.48 Aligned_cols=31 Identities=13% Similarity=0.247 Sum_probs=17.4
Q ss_pred CcchHHHHHHhhHH-----HHH-HHHHHHhcCCCchh
Q 011756 159 ILTWRWLLALSAIP-----AFV-LLIFIVFMPESPRY 189 (478)
Q Consensus 159 ~~~WR~~f~i~~i~-----~~l-~~~~~~~lpESP~~ 189 (478)
.+-.|.+|.+..+. .++ .++.++.+|+.|.-
T Consensus 28 ~~~VRl~~vl~~~~~~~~~~ll~Y~i~w~~lp~~p~~ 64 (121)
T TIGR02978 28 VWLVRILVVSALLFGGGFFVLVAYIALWLLLDKKPIN 64 (121)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCccc
Confidence 34467776654332 222 34566778887754
No 285
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=39.82 E-value=43 Score=23.34 Aligned_cols=38 Identities=18% Similarity=0.182 Sum_probs=25.6
Q ss_pred hchHHHHHHHHHHhhcccCchhhHHHHHhhccCCCCch
Q 011756 95 SPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRG 132 (478)
Q Consensus 95 a~~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg 132 (478)
+-|+..+...-..-+++.|.......+++|..+++.+|
T Consensus 25 ~i~it~F~~n~~~g~i~i~I~l~l~G~isE~i~~~Kgg 62 (63)
T PF06341_consen 25 FINITAFLINQIAGLISIGITLFLAGLISEFISKQKGG 62 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 34566666666666666666666667889999885554
No 286
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=38.83 E-value=4.3e+02 Score=26.74 Aligned_cols=37 Identities=11% Similarity=0.117 Sum_probs=26.9
Q ss_pred hhhhhhcccccCcChhHHHHHHHHHHHhHhHhHHHHH
Q 011756 385 IIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLV 421 (478)
Q Consensus 385 ~~~~~~~~E~~p~~~R~~~~g~~~~~~~lg~~~~p~~ 421 (478)
.....+.++..+++.|-.+-.+++.+-.+|-..|..+
T Consensus 391 s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 391 SLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457788888999999888887777766665555543
No 287
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=35.15 E-value=5.6e+02 Score=27.02 Aligned_cols=206 Identities=16% Similarity=0.065 Sum_probs=0.0
Q ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcccccccccCccchhhHHHHHHHHhhhhhHHHHHHHHHhhh
Q 011756 261 FSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRV 340 (478)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~ 340 (478)
++...++........-......+||+.-..-.+. ....+........+.....-......+++++++|-+
T Consensus 31 ~~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~yl----------t~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f 100 (571)
T KOG1237|consen 31 FKTGGWLSAPFILGNEVLERLAFFGLVSNLVTYL----------TLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSF 100 (571)
T ss_pred ceechhHhHHHHHHHHHHHHHhHhcchhHHHHHH----------HHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q ss_pred -chHHHHHHHHHHHHHHHHHHHhhchhH-------------------------HHHHHHHHHHHHhhhhhhhhhhhcccc
Q 011756 341 -GRKLSMTIMFIFVCIFLLPLVTLQSNI-------------------------LLTALLSGARMFSMGTFIIANIFAPEI 394 (478)
Q Consensus 341 -GRr~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~g~~~~~~~~~~E~ 394 (478)
||=+.+.++.++.......+....... ....-+........|.-+..-.+.+|-
T Consensus 101 ~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQ 180 (571)
T KOG1237|consen 101 LGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQ 180 (571)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccc
Q ss_pred cC----cChhH--HHHHHHHHHHhHhHhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHhccccccCcccchhhccc
Q 011756 395 YP----TSMRS--TGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELVNTIDGV 468 (478)
Q Consensus 395 ~p----~~~R~--~~~g~~~~~~~lg~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~pet~g~~l~~~~~~~ 468 (478)
|+ .+.+. .-+.+.+...+.|..++..+..+..+..++...+.+..++..++.++.+.--|--+.++.... ..
T Consensus 181 fd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gs--p~ 258 (571)
T KOG1237|consen 181 FDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGS--PK 258 (571)
T ss_pred cCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCC--ch
Q ss_pred cccccceecC
Q 011756 469 SNSKQVLVVA 478 (478)
Q Consensus 469 ~~~~~~~~~~ 478 (478)
....++++.+
T Consensus 259 t~i~~Vlvaa 268 (571)
T KOG1237|consen 259 TRIGQVLVAA 268 (571)
T ss_pred hHHHHHHHHH
No 288
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=35.14 E-value=50 Score=22.95 Aligned_cols=30 Identities=17% Similarity=0.363 Sum_probs=18.0
Q ss_pred cCcchHHHHHHhhHH---HH-HHHHHHHhcCCCc
Q 011756 158 PILTWRWLLALSAIP---AF-VLLIFIVFMPESP 187 (478)
Q Consensus 158 ~~~~WR~~f~i~~i~---~~-l~~~~~~~lpESP 187 (478)
+..-+|..|.+..+. ++ +.++.+..+|+.|
T Consensus 27 d~~~vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 27 DPTLVRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred CHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 344578888776542 22 2245566788876
No 289
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=35.03 E-value=4e+02 Score=25.23 Aligned_cols=62 Identities=32% Similarity=0.364 Sum_probs=36.4
Q ss_pred HHhhhchHHHHHHHHHHhhcccCchhh-HHHH-HhhccCCCCchhH----HHHHHHHHHHHHHHHHHHHH
Q 011756 91 LSAFSPNYISLLILRGLAGAGLGSGHV-FFSW-FMEFVPPSNRGKW----MVVFSTFWTFGSVSEAALAW 154 (478)
Q Consensus 91 ~~~~a~~~~~l~~~R~l~Gig~g~~~~-~~~~-~~E~~p~~~Rg~~----~~~~~~~~~~G~~~~~~~~~ 154 (478)
++-.+|.|-.++++|.+-|+....-.. .-+| ++|.-. +||.- ...+.=...+|.-+.+++++
T Consensus 117 iTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHne--kr~FeqqWls~TFskA~ffgNglvAiiaG 184 (454)
T KOG4332|consen 117 ITKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNE--KRGFEQQWLSVTFSKAVFFGNGLVAIIAG 184 (454)
T ss_pred HhhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhh--ccCChHhhhhHHHHHHHHhhccHHHHHHH
Confidence 455688999999999998887665433 2355 678763 34433 33333334345444444444
No 290
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=32.98 E-value=4.6e+02 Score=25.39 Aligned_cols=97 Identities=15% Similarity=0.094 Sum_probs=50.4
Q ss_pred HHHHHHHhhhchHHHHHHHHHHhhcccCchhhHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhc--CcchH
Q 011756 86 FVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP--ILTWR 163 (478)
Q Consensus 86 ~i~~~~~~~a~~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~--~~~WR 163 (478)
..+-.+.+++++.++=+.+-.+.-++-|.+.+...-++ .+......+.|+.+.+.+.++|+.-...+.+ ...=|
T Consensus 103 a~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~ls----s~Y~~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk 178 (409)
T KOG3880|consen 103 ALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALS----SRYPSIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPK 178 (409)
T ss_pred hcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhh----ccCCCceeccccCCCCcchhhhhhHHHHHhhhcCCChh
Confidence 33445667888888888887777776665433221121 1222223344444544444555543333332 23556
Q ss_pred HHHHHhh-HHHHHHHHHHHhcCCC
Q 011756 164 WLLALSA-IPAFVLLIFIVFMPES 186 (478)
Q Consensus 164 ~~f~i~~-i~~~l~~~~~~~lpES 186 (478)
....+.. +|.+..+..++.++++
T Consensus 179 ~Tlli~l~lP~lfa~~yf~lL~~p 202 (409)
T KOG3880|consen 179 STLLIMLFLPALFAFAYFFLLKSP 202 (409)
T ss_pred hHHHHHHHHHHHHHHHHHheeCCC
Confidence 6666654 5666555554444433
No 291
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=30.84 E-value=1.2e+02 Score=28.51 Aligned_cols=16 Identities=31% Similarity=0.426 Sum_probs=12.3
Q ss_pred HHHHHHhhhchHHHHH
Q 011756 332 TAALLVDRVGRKLSMT 347 (478)
Q Consensus 332 ~~~~l~dr~GRr~~~~ 347 (478)
+.|-+.||.|||+...
T Consensus 91 ivgSLaDkqGRKracv 106 (454)
T KOG4332|consen 91 IVGSLADKQGRKRACV 106 (454)
T ss_pred HHHHHHhhhcccccee
Confidence 3456899999999654
No 292
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=30.77 E-value=1.1e+02 Score=25.41 Aligned_cols=23 Identities=26% Similarity=0.226 Sum_probs=18.6
Q ss_pred HhhccCCCCchhHHHHHHHHHHH
Q 011756 122 FMEFVPPSNRGKWMVVFSTFWTF 144 (478)
Q Consensus 122 ~~E~~p~~~Rg~~~~~~~~~~~~ 144 (478)
+.|++|++.|....+.++.....
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~ 82 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSA 82 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHH
Confidence 67999999999998887765543
No 293
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=28.92 E-value=1.9e+02 Score=31.28 Aligned_cols=43 Identities=14% Similarity=0.274 Sum_probs=35.5
Q ss_pred hhhhhcccccCcChhHHHHHHHHHHHhH-hHhHHHHHHHHHhhc
Q 011756 386 IANIFAPEIYPTSMRSTGAGVAYAVGRI-GGMVCPLVAVGLVTS 428 (478)
Q Consensus 386 ~~~~~~~E~~p~~~R~~~~g~~~~~~~l-g~~~~p~~~~~l~~~ 428 (478)
+...+.-...|.+.|+.|.|+-..+-|+ |.+-+|++++.+++.
T Consensus 606 p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 606 PGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred cceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHhh
Confidence 3455666889999999999999999885 666799999988754
No 294
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=25.37 E-value=1.3e+02 Score=25.02 Aligned_cols=22 Identities=32% Similarity=0.480 Sum_probs=18.0
Q ss_pred HhhccCCCCchhHHHHHHHHHH
Q 011756 122 FMEFVPPSNRGKWMVVFSTFWT 143 (478)
Q Consensus 122 ~~E~~p~~~Rg~~~~~~~~~~~ 143 (478)
+.|++|+..|..+.+.++....
T Consensus 58 LkDm~Pp~~R~~i~~~~s~t~s 79 (145)
T TIGR00986 58 LKDIVPPTTRGWIYHKYSTTTN 79 (145)
T ss_pred HHhhCCHHHHHHHHHHHHHHHH
Confidence 6799999999999887765544
No 295
>PRK10263 DNA translocase FtsK; Provisional
Probab=25.28 E-value=1.2e+03 Score=27.55 Aligned_cols=18 Identities=28% Similarity=0.375 Sum_probs=9.0
Q ss_pred hhhhhHHHHHHHHHhhhc
Q 011756 324 FAELPGLLTAALLVDRVG 341 (478)
Q Consensus 324 ~~~~~g~~~~~~l~dr~G 341 (478)
.++.+|.++...+..-+|
T Consensus 63 l~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 63 LGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred ccchHHHHHHHHHHHHHh
Confidence 444455555555544445
No 296
>PRK03612 spermidine synthase; Provisional
Probab=25.22 E-value=7.9e+02 Score=25.56 Aligned_cols=26 Identities=19% Similarity=0.195 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHhHhHhHHHHHHHHHh
Q 011756 401 STGAGVAYAVGRIGGMVCPLVAVGLV 426 (478)
Q Consensus 401 ~~~~g~~~~~~~lg~~~~p~~~~~l~ 426 (478)
+...|-.+..+.+|+++++.+.+.++
T Consensus 144 g~~~g~ly~~ntlGa~~G~l~~~~vL 169 (521)
T PRK03612 144 GHNVATVLAADYLGALVGGLAFPFLL 169 (521)
T ss_pred hhhhhhhHhHHhHHHHHHHHHHHHHH
Confidence 45677788888888888877766544
No 297
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=23.13 E-value=2.3e+02 Score=25.68 Aligned_cols=50 Identities=16% Similarity=0.162 Sum_probs=32.4
Q ss_pred chHHHHHHhhHHHHHHHHH--HHhcCCCchhhhhcCChhHHHHHHHHHHHHc
Q 011756 161 TWRWLLALSAIPAFVLLIF--IVFMPESPRYLCTKGRITDAHNILDKIAQFN 210 (478)
Q Consensus 161 ~WR~~f~i~~i~~~l~~~~--~~~lpESP~~l~~~~~~~~a~~~l~~~~~~~ 210 (478)
++.|.+.+.+++..++... +-.--|...|-...|+.-.|..+++.+++..
T Consensus 50 ~~~~~~~i~gi~~g~l~am~vl~rra~ra~Y~qieGqpGAa~avL~~lr~~W 101 (224)
T PF13829_consen 50 GSWWYWLIIGILLGLLAAMIVLSRRAQRAAYAQIEGQPGAAGAVLDNLRRGW 101 (224)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHhhcCCc
Confidence 4556666666554443222 2223466677777899999999999988743
No 298
>PF13428 TPR_14: Tetratricopeptide repeat
Probab=21.70 E-value=1.4e+02 Score=18.67 Aligned_cols=22 Identities=14% Similarity=0.241 Sum_probs=17.7
Q ss_pred hhhhcCChhHHHHHHHHHHHHc
Q 011756 189 YLCTKGRITDAHNILDKIAQFN 210 (478)
Q Consensus 189 ~l~~~~~~~~a~~~l~~~~~~~ 210 (478)
.+...|+.++|++.+++.-+.+
T Consensus 10 ~~~~~G~~~~A~~~~~~~l~~~ 31 (44)
T PF13428_consen 10 AYRRLGQPDEAERLLRRALALD 31 (44)
T ss_pred HHHHcCCHHHHHHHHHHHHHHC
Confidence 4567899999999999886544
No 299
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=21.11 E-value=3.6e+02 Score=27.55 Aligned_cols=38 Identities=8% Similarity=-0.022 Sum_probs=27.1
Q ss_pred hhhhhhhhcccccCcChhHH-HHHHHHHHHhHhHhHHHH
Q 011756 383 TFIIANIFAPEIYPTSMRST-GAGVAYAVGRIGGMVCPL 420 (478)
Q Consensus 383 ~~~~~~~~~~E~~p~~~R~~-~~g~~~~~~~lg~~~~p~ 420 (478)
...++-.+.+++...+.+.+ +.+....+-.+|+.++-.
T Consensus 159 ~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~ 197 (498)
T KOG0637|consen 159 LQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYA 197 (498)
T ss_pred hhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeee
Confidence 34556788889988877777 877777777777666543
No 300
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=20.18 E-value=5.1e+02 Score=25.55 Aligned_cols=14 Identities=7% Similarity=0.178 Sum_probs=8.3
Q ss_pred HhcCcchHHHHHHh
Q 011756 156 VMPILTWRWLLALS 169 (478)
Q Consensus 156 ~~~~~~WR~~f~i~ 169 (478)
+.+....|-+|++.
T Consensus 36 if~~~~f~kPFfiT 49 (416)
T KOG2765|consen 36 IFEDYNFRKPFFIT 49 (416)
T ss_pred HHhhcccCCceeEe
Confidence 33445677777665
Done!