Query 011759
Match_columns 478
No_of_seqs 262 out of 831
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 14:44:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011759.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011759hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n71_A Histone lysine methyltr 99.8 7.1E-19 2.4E-23 187.7 19.8 157 62-302 305-462 (490)
2 3edt_B KLC 2, kinesin light ch 99.8 1.3E-16 4.4E-21 148.4 23.0 160 64-307 41-201 (283)
3 3nf1_A KLC 1, kinesin light ch 99.7 3E-15 1E-19 141.8 23.5 160 64-307 25-185 (311)
4 3edt_B KLC 2, kinesin light ch 99.7 2.3E-15 7.7E-20 140.0 20.9 158 64-305 83-282 (283)
5 3qww_A SET and MYND domain-con 99.7 6.5E-16 2.2E-20 162.4 18.8 135 64-282 296-431 (433)
6 3nf1_A KLC 1, kinesin light ch 99.7 5.2E-15 1.8E-19 140.1 22.9 159 65-307 68-227 (311)
7 3vtx_A MAMA; tetratricopeptide 99.7 2.1E-15 7.3E-20 134.7 15.8 170 65-307 4-173 (184)
8 3qwp_A SET and MYND domain-con 99.6 2.4E-15 8.1E-20 157.7 16.7 139 64-286 285-424 (429)
9 3ulq_A Response regulator aspa 99.6 5.5E-15 1.9E-19 147.9 18.0 151 69-307 106-256 (383)
10 3ro3_A PINS homolog, G-protein 99.6 3.5E-14 1.2E-18 120.4 20.0 155 63-306 6-160 (164)
11 3gw4_A Uncharacterized protein 99.6 3.6E-14 1.2E-18 127.2 20.6 155 65-307 25-179 (203)
12 3q15_A PSP28, response regulat 99.6 1E-14 3.5E-19 146.2 17.3 154 66-307 101-254 (378)
13 3ulq_A Response regulator aspa 99.6 5.5E-14 1.9E-18 140.6 21.8 156 64-307 141-296 (383)
14 4gyw_A UDP-N-acetylglucosamine 99.6 2.3E-14 7.7E-19 159.5 18.0 174 64-310 7-180 (723)
15 3u3w_A Transcriptional activat 99.6 5.5E-14 1.9E-18 136.5 18.4 100 206-307 169-269 (293)
16 3qww_A SET and MYND domain-con 99.6 1.1E-14 3.9E-19 153.0 13.4 107 204-310 310-417 (433)
17 1qqe_A Vesicular transport pro 99.6 1.6E-13 5.6E-18 133.8 20.5 151 66-305 37-188 (292)
18 2qfc_A PLCR protein; TPR, HTH, 99.6 1.3E-13 4.4E-18 133.9 18.6 194 63-306 72-268 (293)
19 3q15_A PSP28, response regulat 99.5 3E-13 1E-17 135.6 21.0 154 63-305 138-291 (378)
20 2ifu_A Gamma-SNAP; membrane fu 99.5 2.1E-13 7.2E-18 133.9 18.7 152 64-305 33-185 (307)
21 3n71_A Histone lysine methyltr 99.5 4.3E-14 1.5E-18 150.8 13.6 107 204-310 321-428 (490)
22 3urz_A Uncharacterized protein 99.5 1.5E-13 5.2E-18 127.5 15.1 141 66-306 4-188 (208)
23 4gyw_A UDP-N-acetylglucosamine 99.5 2.5E-13 8.7E-18 151.1 17.7 158 66-290 43-200 (723)
24 4a1s_A PINS, partner of inscut 99.5 8.5E-13 2.9E-17 131.4 19.6 194 63-307 45-255 (411)
25 2pl2_A Hypothetical conserved 99.5 2.4E-13 8.4E-18 126.9 14.5 133 66-305 5-148 (217)
26 1qqe_A Vesicular transport pro 99.5 3.8E-13 1.3E-17 131.1 16.4 156 65-307 76-231 (292)
27 4a1s_A PINS, partner of inscut 99.5 9.2E-13 3.1E-17 131.1 19.4 99 205-306 99-214 (411)
28 4i17_A Hypothetical protein; T 99.5 1.3E-12 4.4E-17 120.8 17.4 141 67-307 8-149 (228)
29 3sf4_A G-protein-signaling mod 99.5 1.7E-12 5.8E-17 127.5 18.9 99 206-307 101-219 (406)
30 2ifu_A Gamma-SNAP; membrane fu 99.5 1.2E-12 4.2E-17 128.5 17.4 150 65-305 75-224 (307)
31 3sf4_A G-protein-signaling mod 99.5 4.3E-12 1.5E-16 124.6 21.1 100 205-307 160-259 (406)
32 3qwp_A SET and MYND domain-con 99.5 1.6E-13 5.3E-18 143.9 10.8 106 205-310 300-406 (429)
33 2pl2_A Hypothetical conserved 99.4 1.9E-12 6.5E-17 120.8 16.6 143 66-305 39-181 (217)
34 3uq3_A Heat shock protein STI1 99.4 6.4E-12 2.2E-16 115.6 19.9 149 64-306 3-170 (258)
35 3ro2_A PINS homolog, G-protein 99.4 3.8E-12 1.3E-16 120.2 18.8 150 66-306 5-174 (338)
36 4i17_A Hypothetical protein; T 99.4 5E-13 1.7E-17 123.6 12.3 125 67-291 43-169 (228)
37 3ro2_A PINS homolog, G-protein 99.4 6E-12 2.1E-16 118.9 19.5 155 64-307 41-215 (338)
38 4ga2_A E3 SUMO-protein ligase 99.4 1.2E-13 3.9E-18 122.4 7.1 129 71-306 2-131 (150)
39 4gcn_A Protein STI-1; structur 99.4 2.7E-12 9.2E-17 110.6 15.2 109 63-263 5-113 (127)
40 4gco_A Protein STI-1; structur 99.4 1.8E-12 6.1E-17 111.9 14.0 115 64-285 11-125 (126)
41 4gcn_A Protein STI-1; structur 99.4 3E-12 1E-16 110.3 14.8 91 206-304 22-112 (127)
42 1hh8_A P67PHOX, NCF-2, neutrop 99.4 1.2E-12 4E-17 119.0 12.3 142 62-305 2-151 (213)
43 2qfc_A PLCR protein; TPR, HTH, 99.4 4.2E-12 1.4E-16 123.2 15.6 99 206-307 129-228 (293)
44 1a17_A Serine/threonine protei 99.4 1E-11 3.4E-16 107.3 16.4 142 60-306 7-148 (166)
45 3u3w_A Transcriptional activat 99.4 1.5E-11 5.3E-16 119.2 19.5 153 64-307 73-228 (293)
46 2h6f_A Protein farnesyltransfe 99.4 1.9E-12 6.5E-17 133.4 13.7 53 63-123 94-146 (382)
47 4g1t_A Interferon-induced prot 99.4 8.4E-12 2.9E-16 126.7 18.1 147 66-304 51-204 (472)
48 3uq3_A Heat shock protein STI1 99.4 1E-11 3.5E-16 114.1 16.7 167 66-306 38-204 (258)
49 1fch_A Peroxisomal targeting s 99.4 5.1E-12 1.8E-16 123.3 15.3 144 66-308 217-363 (368)
50 3qky_A Outer membrane assembly 99.4 8.4E-12 2.9E-16 118.1 15.8 143 66-306 15-179 (261)
51 4eqf_A PEX5-related protein; a 99.4 1.5E-11 5.1E-16 120.9 17.8 89 203-306 188-278 (365)
52 4eqf_A PEX5-related protein; a 99.4 1E-11 3.5E-16 122.0 16.2 50 66-123 65-114 (365)
53 2vq2_A PILW, putative fimbrial 99.4 4E-11 1.4E-15 107.9 18.4 169 64-305 6-177 (225)
54 3gyz_A Chaperone protein IPGC; 99.3 1.1E-12 3.7E-17 118.1 7.6 84 206-304 50-133 (151)
55 3qky_A Outer membrane assembly 99.3 3.9E-11 1.3E-15 113.5 18.3 169 66-320 52-249 (261)
56 2fo7_A Synthetic consensus TPR 99.3 5.6E-11 1.9E-15 97.3 16.9 131 67-304 2-132 (136)
57 2hr2_A Hypothetical protein; a 99.3 3E-11 1E-15 111.0 16.4 125 59-267 4-136 (159)
58 3gw4_A Uncharacterized protein 99.3 3.9E-11 1.3E-15 107.3 16.5 99 206-306 40-138 (203)
59 3as5_A MAMA; tetratricopeptide 99.3 6.3E-11 2.2E-15 102.8 17.3 168 65-305 7-174 (186)
60 2ho1_A Type 4 fimbrial biogene 99.3 3.3E-11 1.1E-15 111.7 16.4 51 65-123 36-86 (252)
61 4gco_A Protein STI-1; structur 99.3 2.1E-11 7.1E-16 105.2 13.8 84 206-304 27-110 (126)
62 1hz4_A MALT regulatory protein 99.3 9.1E-11 3.1E-15 116.1 20.2 153 65-306 13-166 (373)
63 1fch_A Peroxisomal targeting s 99.3 4E-11 1.4E-15 116.9 17.3 82 216-305 198-281 (368)
64 4abn_A Tetratricopeptide repea 99.3 1.6E-11 5.5E-16 128.7 14.4 175 66-304 102-287 (474)
65 1p5q_A FKBP52, FK506-binding p 99.3 4.1E-11 1.4E-15 120.1 16.7 145 62-305 143-295 (336)
66 3u4t_A TPR repeat-containing p 99.3 2.8E-11 9.4E-16 113.3 14.1 174 66-306 74-252 (272)
67 2r5s_A Uncharacterized protein 99.3 7.5E-12 2.6E-16 112.3 9.8 157 67-304 7-173 (176)
68 3qou_A Protein YBBN; thioredox 99.3 3.1E-11 1.1E-15 117.8 14.9 162 66-305 117-285 (287)
69 3hym_B Cell division cycle pro 99.3 3.3E-11 1.1E-15 114.9 14.7 174 66-304 90-265 (330)
70 1xnf_A Lipoprotein NLPI; TPR, 99.3 2.9E-11 1E-15 112.7 13.7 53 64-124 41-93 (275)
71 3upv_A Heat shock protein STI1 99.3 1.8E-10 6E-15 96.9 17.2 122 65-287 3-124 (126)
72 1w3b_A UDP-N-acetylglucosamine 99.3 4.5E-11 1.5E-15 118.7 15.8 168 66-306 67-234 (388)
73 3u4t_A TPR repeat-containing p 99.3 9.4E-12 3.2E-16 116.5 10.0 170 67-307 4-174 (272)
74 3as5_A MAMA; tetratricopeptide 99.3 4.9E-11 1.7E-15 103.5 13.9 85 206-305 56-140 (186)
75 3cv0_A Peroxisome targeting si 99.3 8.3E-11 2.9E-15 111.9 15.9 144 66-308 172-319 (327)
76 3hym_B Cell division cycle pro 99.3 2.5E-11 8.6E-16 115.7 12.1 173 66-306 125-301 (330)
77 1w3b_A UDP-N-acetylglucosamine 99.3 5.9E-11 2E-15 117.9 14.7 164 66-304 203-368 (388)
78 2q7f_A YRRB protein; TPR, prot 99.3 1.8E-10 6.1E-15 105.4 16.8 165 66-305 57-223 (243)
79 2vgx_A Chaperone SYCD; alterna 99.2 4.7E-11 1.6E-15 105.6 12.2 86 206-306 35-120 (148)
80 2h6f_A Protein farnesyltransfe 99.2 3.4E-11 1.2E-15 124.0 13.1 135 66-307 131-272 (382)
81 2ho1_A Type 4 fimbrial biogene 99.2 1.6E-10 5.4E-15 107.1 16.2 134 66-304 71-204 (252)
82 3rkv_A Putative peptidylprolyl 99.2 1.1E-10 3.8E-15 102.8 14.4 114 60-264 5-128 (162)
83 2q7f_A YRRB protein; TPR, prot 99.2 2.8E-10 9.5E-15 104.1 17.3 169 64-305 21-189 (243)
84 1hz4_A MALT regulatory protein 99.2 3E-10 1E-14 112.3 18.5 153 64-305 51-204 (373)
85 3sz7_A HSC70 cochaperone (SGT) 99.2 1.7E-10 5.7E-15 101.9 14.8 104 64-266 9-112 (164)
86 2vq2_A PILW, putative fimbrial 99.2 3.3E-10 1.1E-14 101.9 16.3 167 66-304 42-211 (225)
87 2vsy_A XCC0866; transferase, g 99.2 1.8E-10 6.2E-15 122.1 16.5 133 66-305 23-158 (568)
88 4g1t_A Interferon-induced prot 99.2 8.6E-11 2.9E-15 119.3 12.3 143 78-306 23-169 (472)
89 3ieg_A DNAJ homolog subfamily 99.2 6.3E-10 2.2E-14 106.7 17.6 136 66-305 3-150 (359)
90 3fp2_A TPR repeat-containing p 99.2 4.3E-10 1.5E-14 115.3 17.4 58 59-124 18-75 (537)
91 2vyi_A SGTA protein; chaperone 99.2 8.4E-10 2.9E-14 90.4 15.8 124 62-292 8-131 (131)
92 2hr2_A Hypothetical protein; a 99.2 3.1E-10 1.1E-14 104.2 14.4 98 206-304 25-131 (159)
93 2pzi_A Probable serine/threoni 99.2 2.2E-11 7.7E-16 133.6 8.0 133 67-307 434-566 (681)
94 3cv0_A Peroxisome targeting si 99.2 7E-10 2.4E-14 105.5 17.3 87 205-306 151-237 (327)
95 2fbn_A 70 kDa peptidylprolyl i 99.2 2.3E-10 7.8E-15 104.1 13.3 138 58-295 30-176 (198)
96 2xcb_A PCRH, regulatory protei 99.2 2.2E-10 7.6E-15 99.3 12.6 86 206-306 32-117 (142)
97 3ro3_A PINS homolog, G-protein 99.2 8.6E-10 2.9E-14 93.1 15.7 99 206-307 23-121 (164)
98 2yhc_A BAMD, UPF0169 lipoprote 99.2 7.5E-10 2.6E-14 103.3 16.6 65 233-302 147-211 (225)
99 4ga2_A E3 SUMO-protein ligase 99.2 2.4E-10 8.2E-15 100.9 12.5 119 65-290 30-149 (150)
100 2xpi_A Anaphase-promoting comp 99.2 7.2E-10 2.5E-14 115.7 18.1 172 66-305 407-580 (597)
101 3sz7_A HSC70 cochaperone (SGT) 99.2 9.4E-10 3.2E-14 97.0 16.0 85 206-305 25-109 (164)
102 1ouv_A Conserved hypothetical 99.2 7.2E-10 2.5E-14 105.0 16.1 158 66-304 6-179 (273)
103 2lni_A Stress-induced-phosphop 99.1 5E-10 1.7E-14 92.7 12.9 119 64-289 14-132 (133)
104 1elr_A TPR2A-domain of HOP; HO 99.1 7.4E-10 2.5E-14 91.0 13.7 122 65-287 3-124 (131)
105 1xnf_A Lipoprotein NLPI; TPR, 99.1 3.9E-10 1.3E-14 105.1 12.9 127 76-305 15-141 (275)
106 3ieg_A DNAJ homolog subfamily 99.1 1E-09 3.6E-14 105.2 16.2 88 206-304 248-335 (359)
107 3rkv_A Putative peptidylprolyl 99.1 6.1E-10 2.1E-14 98.1 13.4 92 206-305 25-127 (162)
108 3gyz_A Chaperone protein IPGC; 99.1 6E-10 2E-14 100.1 13.5 101 64-263 34-134 (151)
109 3upv_A Heat shock protein STI1 99.1 7.5E-10 2.6E-14 93.0 13.3 85 206-305 18-102 (126)
110 2e2e_A Formate-dependent nitri 99.1 3.8E-11 1.3E-15 106.7 5.5 127 71-304 15-144 (177)
111 1kt0_A FKBP51, 51 kDa FK506-bi 99.1 4.8E-10 1.6E-14 117.2 14.3 136 62-296 264-406 (457)
112 2y4t_A DNAJ homolog subfamily 99.1 1.9E-09 6.5E-14 108.2 17.1 89 206-305 271-359 (450)
113 4b4t_Q 26S proteasome regulato 99.1 2.2E-09 7.4E-14 107.7 17.4 155 63-306 52-206 (434)
114 3q49_B STIP1 homology and U bo 99.1 4.6E-09 1.6E-13 88.4 16.7 102 66-266 9-110 (137)
115 2gw1_A Mitochondrial precursor 99.1 1.5E-09 5.1E-14 110.2 15.8 173 66-307 304-481 (514)
116 1elr_A TPR2A-domain of HOP; HO 99.1 6.2E-09 2.1E-13 85.3 16.7 92 206-305 18-109 (131)
117 2y4t_A DNAJ homolog subfamily 99.1 3.2E-09 1.1E-13 106.5 17.8 138 64-305 24-173 (450)
118 2xpi_A Anaphase-promoting comp 99.1 2.7E-09 9.2E-14 111.4 17.8 171 66-304 373-545 (597)
119 3fp2_A TPR repeat-containing p 99.1 1.2E-09 4.2E-14 111.9 14.8 169 64-306 241-409 (537)
120 2if4_A ATFKBP42; FKBP-like, al 99.1 3.4E-10 1.2E-14 113.6 10.3 140 58-304 171-328 (338)
121 1p5q_A FKBP52, FK506-binding p 99.1 6.1E-11 2.1E-15 118.8 4.8 128 78-305 125-260 (336)
122 1wao_1 Serine/threonine protei 99.1 2.3E-11 7.8E-16 128.3 1.2 130 64-300 4-135 (477)
123 1ihg_A Cyclophilin 40; ppiase 99.0 1.4E-09 4.7E-14 111.1 13.9 139 59-296 216-362 (370)
124 2gw1_A Mitochondrial precursor 99.0 3.4E-09 1.2E-13 107.5 16.6 74 233-306 186-268 (514)
125 2vgx_A Chaperone SYCD; alterna 99.0 7E-09 2.4E-13 91.5 16.1 103 64-265 19-121 (148)
126 1ouv_A Conserved hypothetical 99.0 5E-09 1.7E-13 99.2 15.7 160 66-305 38-216 (273)
127 2xcb_A PCRH, regulatory protei 99.0 8.3E-09 2.8E-13 89.3 15.3 102 65-265 17-118 (142)
128 3q49_B STIP1 homology and U bo 99.0 4.4E-09 1.5E-13 88.5 13.1 86 206-306 23-108 (137)
129 2pzi_A Probable serine/threoni 99.0 8E-10 2.7E-14 121.2 10.6 129 77-305 402-530 (681)
130 2vsy_A XCC0866; transferase, g 99.0 1.3E-09 4.6E-14 115.4 11.7 120 79-305 2-121 (568)
131 1elw_A TPR1-domain of HOP; HOP 99.0 7.7E-09 2.6E-13 83.2 13.1 116 64-286 2-117 (118)
132 4b4t_Q 26S proteasome regulato 99.0 1.9E-08 6.5E-13 100.8 19.0 151 68-306 97-247 (434)
133 4abn_A Tetratricopeptide repea 99.0 1.2E-09 4E-14 114.5 10.2 148 66-312 170-326 (474)
134 2fbn_A 70 kDa peptidylprolyl i 99.0 8.9E-10 3E-14 100.2 8.0 91 206-304 52-151 (198)
135 1na0_A Designed protein CTPR3; 99.0 2E-08 6.7E-13 81.4 15.2 116 66-288 9-124 (125)
136 1kt0_A FKBP51, 51 kDa FK506-bi 99.0 2.2E-10 7.4E-15 119.8 4.2 127 78-304 246-380 (457)
137 2c2l_A CHIP, carboxy terminus 99.0 2E-09 6.9E-14 104.8 10.7 102 66-266 4-105 (281)
138 3rjv_A Putative SEL1 repeat pr 99.0 6.6E-09 2.3E-13 96.6 13.6 133 66-304 18-158 (212)
139 3mkr_A Coatomer subunit epsilo 98.9 2.7E-08 9.1E-13 97.5 17.8 154 66-304 101-264 (291)
140 1hxi_A PEX5, peroxisome target 98.9 5.3E-09 1.8E-13 89.1 11.1 100 67-265 18-117 (121)
141 2xev_A YBGF; tetratricopeptide 98.9 1.4E-08 4.8E-13 84.5 12.0 90 206-304 16-105 (129)
142 2dba_A Smooth muscle cell asso 98.9 1.8E-08 6.2E-13 85.0 12.7 118 65-286 27-144 (148)
143 2xev_A YBGF; tetratricopeptide 98.9 5.6E-08 1.9E-12 80.8 15.0 118 67-282 3-120 (129)
144 1zu2_A Mitochondrial import re 98.9 3.1E-09 1E-13 97.5 7.7 99 78-265 14-123 (158)
145 3vtx_A MAMA; tetratricopeptide 98.9 9.2E-09 3.1E-13 91.3 10.5 135 66-265 39-173 (184)
146 2lni_A Stress-induced-phosphop 98.9 1.8E-08 6.1E-13 83.2 11.3 84 207-305 31-114 (133)
147 3mkr_A Coatomer subunit epsilo 98.8 6E-08 2.1E-12 95.0 15.3 168 66-310 65-235 (291)
148 1zu2_A Mitochondrial import re 98.8 2.3E-09 7.9E-14 98.3 4.7 84 214-305 17-121 (158)
149 1na0_A Designed protein CTPR3; 98.8 6.4E-08 2.2E-12 78.3 12.8 84 206-304 23-106 (125)
150 2vyi_A SGTA protein; chaperone 98.8 7.2E-08 2.4E-12 78.7 13.2 85 206-305 26-110 (131)
151 3k9i_A BH0479 protein; putativ 98.8 7.1E-09 2.4E-13 86.7 7.1 88 206-305 4-91 (117)
152 1a17_A Serine/threonine protei 98.8 8.4E-08 2.9E-12 82.4 13.5 84 206-304 27-110 (166)
153 2kck_A TPR repeat; tetratricop 98.8 1.2E-08 4.1E-13 81.5 7.5 85 206-303 20-105 (112)
154 2dba_A Smooth muscle cell asso 98.8 4.6E-08 1.6E-12 82.4 10.9 88 206-305 42-129 (148)
155 2kat_A Uncharacterized protein 98.8 3.4E-08 1.2E-12 81.8 9.7 80 219-306 5-84 (115)
156 1hxi_A PEX5, peroxisome target 98.8 1.1E-08 3.9E-13 87.1 6.9 85 206-305 31-115 (121)
157 1elw_A TPR1-domain of HOP; HOP 98.8 9.2E-08 3.2E-12 76.8 12.0 84 206-304 18-101 (118)
158 1hh8_A P67PHOX, NCF-2, neutrop 98.7 6.2E-08 2.1E-12 87.6 12.0 107 66-264 37-152 (213)
159 3rjv_A Putative SEL1 repeat pr 98.7 1E-07 3.5E-12 88.5 13.6 134 66-304 50-197 (212)
160 2ond_A Cleavage stimulation fa 98.7 1.1E-07 3.8E-12 92.7 14.3 81 216-304 151-232 (308)
161 1ihg_A Cyclophilin 40; ppiase 98.7 8.5E-08 2.9E-12 97.8 13.0 91 206-304 237-336 (370)
162 3ma5_A Tetratricopeptide repea 98.7 3.6E-08 1.2E-12 80.8 8.3 70 230-307 4-73 (100)
163 2kck_A TPR repeat; tetratricop 98.7 5.9E-08 2E-12 77.4 8.6 97 67-262 7-106 (112)
164 2c2l_A CHIP, carboxy terminus 98.7 8.9E-08 3.1E-12 93.0 11.2 86 206-306 18-103 (281)
165 4f3v_A ESX-1 secretion system 98.7 1.6E-07 5.3E-12 93.7 12.8 146 66-319 102-250 (282)
166 4f3v_A ESX-1 secretion system 98.7 1.6E-07 5.6E-12 93.5 12.8 176 64-302 5-198 (282)
167 3k9i_A BH0479 protein; putativ 98.6 8.9E-08 3E-12 79.9 8.5 91 78-264 2-92 (117)
168 2ond_A Cleavage stimulation fa 98.6 2.7E-07 9.3E-12 89.9 12.9 31 83-121 33-63 (308)
169 3urz_A Uncharacterized protein 98.6 1.2E-07 4.2E-12 87.4 9.7 86 206-306 18-119 (208)
170 2e2e_A Formate-dependent nitri 98.6 8.2E-07 2.8E-11 78.4 14.4 100 66-264 44-146 (177)
171 2l6j_A TPR repeat-containing p 98.6 1.1E-07 3.7E-12 76.7 7.7 65 232-304 3-67 (111)
172 2if4_A ATFKBP42; FKBP-like, al 98.6 1.2E-07 4.2E-12 94.9 9.2 93 206-306 193-295 (338)
173 2xm6_A Protein corresponding t 98.6 1.1E-06 3.7E-11 91.1 16.1 160 65-304 38-216 (490)
174 2xm6_A Protein corresponding t 98.5 1E-06 3.6E-11 91.2 15.9 80 207-305 346-433 (490)
175 2fo7_A Synthetic consensus TPR 98.5 1.1E-06 3.7E-11 71.4 12.4 85 206-305 15-99 (136)
176 1na3_A Designed protein CTPR2; 98.5 3.7E-07 1.3E-11 71.0 9.0 67 230-304 6-72 (91)
177 2l6j_A TPR repeat-containing p 98.5 3.1E-08 1.1E-12 80.0 2.3 101 65-258 3-103 (111)
178 1wao_1 Serine/threonine protei 98.4 5.7E-07 2E-11 94.6 9.6 86 205-305 19-104 (477)
179 2yhc_A BAMD, UPF0169 lipoprote 98.3 2.1E-06 7.2E-11 79.7 10.9 91 206-305 18-126 (225)
180 2kat_A Uncharacterized protein 98.3 1.7E-06 5.7E-11 71.4 8.5 54 206-266 33-86 (115)
181 1klx_A Cysteine rich protein B 98.3 3.6E-06 1.2E-10 73.4 10.2 75 211-304 44-126 (138)
182 3e4b_A ALGK; tetratricopeptide 98.3 2.7E-06 9.4E-11 88.3 10.9 78 206-304 265-351 (452)
183 2ooe_A Cleavage stimulation fa 98.2 1.5E-05 5E-10 83.4 15.8 82 208-304 372-454 (530)
184 3e4b_A ALGK; tetratricopeptide 98.2 8.3E-06 2.8E-10 84.7 13.0 79 206-304 301-387 (452)
185 2kc7_A BFR218_protein; tetratr 98.2 2.9E-06 1E-10 67.7 6.8 61 236-304 3-64 (99)
186 3ly7_A Transcriptional activat 98.2 3.7E-05 1.3E-09 79.3 16.6 141 66-304 196-339 (372)
187 3qou_A Protein YBBN; thioredox 98.2 8.6E-06 2.9E-10 79.1 11.2 91 206-304 131-248 (287)
188 2ooe_A Cleavage stimulation fa 98.2 8.1E-06 2.8E-10 85.4 11.7 30 83-120 255-284 (530)
189 1na3_A Designed protein CTPR2; 98.2 2.6E-05 9E-10 60.3 11.7 49 65-121 8-56 (91)
190 2v5f_A Prolyl 4-hydroxylase su 98.2 9.9E-06 3.4E-10 67.3 9.8 72 233-305 5-76 (104)
191 1xi4_A Clathrin heavy chain; a 98.1 3.1E-05 1.1E-09 91.2 15.5 83 205-304 1147-1250(1630)
192 2r5s_A Uncharacterized protein 98.1 2.9E-06 1E-10 75.6 4.8 89 216-304 23-137 (176)
193 3ma5_A Tetratricopeptide repea 98.0 4.2E-05 1.4E-09 62.2 10.0 54 206-266 21-74 (100)
194 1pc2_A Mitochondria fission pr 98.0 4.3E-05 1.5E-09 69.5 10.9 87 213-306 12-102 (152)
195 2kc7_A BFR218_protein; tetratr 98.0 1.9E-05 6.7E-10 62.8 7.7 45 69-121 3-48 (99)
196 3u64_A Protein TP_0956; tetrat 97.9 0.00017 5.8E-09 72.2 15.7 88 205-304 176-269 (301)
197 1dce_A Protein (RAB geranylger 97.8 0.00011 3.6E-09 79.4 13.3 149 59-304 21-173 (567)
198 1xi4_A Clathrin heavy chain; a 97.8 0.00026 8.9E-09 83.5 16.7 87 232-319 1133-1244(1630)
199 3dra_A Protein farnesyltransfe 97.8 0.00034 1.2E-08 70.0 14.4 135 66-305 32-176 (306)
200 1dce_A Protein (RAB geranylger 97.6 0.00019 6.4E-09 77.5 10.7 135 66-305 63-222 (567)
201 2v5f_A Prolyl 4-hydroxylase su 97.6 0.00043 1.5E-08 57.2 10.6 69 206-282 19-87 (104)
202 1b89_A Protein (clathrin heavy 97.5 3E-05 1E-09 81.8 2.9 55 234-304 123-177 (449)
203 3ffl_A Anaphase-promoting comp 97.4 0.00091 3.1E-08 61.6 10.9 95 206-300 34-147 (167)
204 3dra_A Protein farnesyltransfe 97.4 0.0018 6.3E-08 64.6 14.1 140 66-305 67-216 (306)
205 3dss_A Geranylgeranyl transfer 97.4 0.002 7E-08 65.2 14.6 142 66-304 29-174 (331)
206 3bee_A Putative YFRE protein; 97.3 0.00028 9.4E-09 58.1 6.0 66 230-303 3-71 (93)
207 1klx_A Cysteine rich protein B 97.2 0.00076 2.6E-08 58.4 7.2 78 206-304 9-90 (138)
208 3bee_A Putative YFRE protein; 97.1 0.0027 9.3E-08 52.1 9.8 48 209-263 26-73 (93)
209 1b89_A Protein (clathrin heavy 97.0 0.00087 3E-08 70.7 7.4 64 235-306 209-274 (449)
210 1nzn_A CGI-135 protein, fissio 96.9 0.011 3.6E-07 52.1 12.1 104 210-317 12-118 (126)
211 3mv2_B Coatomer subunit epsilo 96.8 0.0092 3.2E-07 60.0 12.5 139 67-305 101-241 (310)
212 3q7a_A Farnesyltransferase alp 96.7 0.0064 2.2E-07 62.0 10.8 126 74-305 61-197 (349)
213 3q7a_A Farnesyltransferase alp 96.7 0.012 4.1E-07 60.0 12.7 136 66-306 88-239 (349)
214 3dss_A Geranylgeranyl transfer 96.6 0.015 5.3E-07 58.7 12.5 134 68-306 66-224 (331)
215 1pc2_A Mitochondria fission pr 96.4 0.019 6.3E-07 52.1 10.5 56 206-266 49-104 (152)
216 3ffl_A Anaphase-promoting comp 96.1 0.13 4.3E-06 47.3 14.1 107 67-257 21-146 (167)
217 3mv2_B Coatomer subunit epsilo 95.9 0.18 6.2E-06 50.5 15.5 88 207-304 193-282 (310)
218 3o48_A Mitochondria fission 1 95.4 0.063 2.2E-06 47.6 9.0 89 212-305 20-108 (134)
219 3txn_A 26S proteasome regulato 95.4 0.12 4.2E-06 53.4 12.5 100 204-305 111-211 (394)
220 2ff4_A Probable regulatory pro 95.2 0.2 6.9E-06 51.2 13.2 68 233-308 171-238 (388)
221 3u64_A Protein TP_0956; tetrat 95.1 0.11 3.9E-06 51.8 10.8 64 206-278 218-283 (301)
222 1y8m_A FIS1; mitochondria, unk 95.1 0.12 4E-06 46.4 9.7 85 213-304 20-106 (144)
223 4b4t_P 26S proteasome regulato 95.0 1 3.4E-05 46.9 18.3 117 63-266 134-251 (445)
224 4e6h_A MRNA 3'-END-processing 94.2 0.34 1.2E-05 53.4 12.9 85 208-306 450-535 (679)
225 4e6h_A MRNA 3'-END-processing 94.1 0.52 1.8E-05 51.9 14.2 94 206-306 392-501 (679)
226 3txn_A 26S proteasome regulato 93.9 2 7E-05 44.2 17.4 131 71-290 104-235 (394)
227 1ya0_A SMG-7 transcript varian 93.1 0.15 5.3E-06 54.2 7.5 63 234-304 153-215 (497)
228 4b4t_S RPN3, 26S proteasome re 91.8 0.48 1.7E-05 50.7 9.2 68 230-303 228-298 (523)
229 4h7y_A Dual specificity protei 91.6 0.31 1.1E-05 44.3 6.3 83 230-321 58-140 (161)
230 2cpt_A SKD1 protein, vacuolar 91.3 1.4 4.7E-05 38.0 9.9 61 61-121 13-75 (117)
231 4b4t_R RPN7, 26S proteasome re 90.9 0.84 2.9E-05 47.1 9.8 96 203-304 142-237 (429)
232 1nzn_A CGI-135 protein, fissio 90.6 0.79 2.7E-05 40.0 7.8 59 206-264 37-105 (126)
233 3ly7_A Transcriptional activat 90.3 0.37 1.3E-05 49.5 6.3 88 216-305 216-307 (372)
234 1o9d_A 14-3-3-like protein C; 90.3 1.2 4E-05 43.7 9.5 73 232-304 131-207 (260)
235 4b4t_R RPN7, 26S proteasome re 90.1 0.39 1.3E-05 49.7 6.4 88 213-305 111-198 (429)
236 2v6x_A Vacuolar protein sortin 89.5 1.9 6.7E-05 34.5 8.9 60 61-120 8-68 (85)
237 2o8p_A 14-3-3 domain containin 89.5 1.6 5.5E-05 41.8 9.6 72 232-305 126-198 (227)
238 2w2u_A Hypothetical P60 katani 89.3 1.8 6.1E-05 35.0 8.4 51 61-111 14-65 (83)
239 3iqu_A 14-3-3 protein sigma; s 89.2 1.4 5E-05 42.4 9.1 72 232-303 129-204 (236)
240 1wfd_A Hypothetical protein 15 89.2 2.5 8.4E-05 34.8 9.3 54 61-114 10-64 (93)
241 2v6y_A AAA family ATPase, P60 88.5 0.92 3.1E-05 36.6 6.2 51 62-112 7-58 (83)
242 4a5x_A MITD1, MIT domain-conta 88.2 2.7 9.2E-05 34.1 8.8 50 64-113 14-64 (86)
243 4b4t_P 26S proteasome regulato 88.1 1.8 6.1E-05 45.0 9.8 100 203-305 148-248 (445)
244 2br9_A 14-3-3E, 14-3-3 protein 88.0 2 6.7E-05 41.4 9.2 72 232-303 126-201 (234)
245 4gns_B Protein CSD3, chitin bi 87.2 5.1 0.00017 44.8 13.2 59 232-298 336-394 (754)
246 3c3r_A Programmed cell death 6 86.9 6.2 0.00021 40.2 12.8 57 252-308 241-308 (380)
247 3uzd_A 14-3-3 protein gamma; s 86.4 1.9 6.6E-05 41.8 8.2 72 232-303 127-202 (248)
248 2crb_A Nuclear receptor bindin 86.0 1.6 5.4E-05 36.3 6.2 41 61-101 10-50 (97)
249 2vkj_A TM1634; membrane protei 85.7 4.4 0.00015 33.5 8.6 52 64-121 51-103 (106)
250 2crb_A Nuclear receptor bindin 85.5 11 0.00039 31.2 11.0 72 229-312 11-82 (97)
251 2xs1_A Programmed cell death 6 85.1 7.9 0.00027 42.7 13.3 56 252-307 226-292 (704)
252 4g26_A Pentatricopeptide repea 84.8 12 0.0004 39.3 14.0 64 233-303 140-203 (501)
253 3o48_A Mitochondria fission 1 84.6 1.5 5.3E-05 38.7 5.9 59 206-264 42-109 (134)
254 2npm_A 14-3-3 domain containin 84.6 3.1 0.00011 40.6 8.7 71 232-303 152-226 (260)
255 3r9m_A BRO1 domain-containing 84.4 9.7 0.00033 38.7 12.8 39 274-312 252-290 (376)
256 2v6x_A Vacuolar protein sortin 84.3 5 0.00017 32.1 8.5 37 274-310 12-48 (85)
257 3mkq_B Coatomer subunit alpha; 83.9 2.7 9.1E-05 38.8 7.5 90 206-300 10-114 (177)
258 2cpt_A SKD1 protein, vacuolar 83.8 2.9 0.0001 35.8 7.3 36 275-310 18-53 (117)
259 1zb1_A BRO1 protein; AIP1, BRO 83.7 7.2 0.00025 39.8 11.5 58 251-308 217-290 (392)
260 1y8m_A FIS1; mitochondria, unk 83.4 2.2 7.4E-05 38.2 6.4 60 205-264 40-108 (144)
261 3ubw_A 14-3-3E, 14-3-3 protein 83.0 3.4 0.00012 40.3 8.2 72 232-303 152-227 (261)
262 4a5x_A MITD1, MIT domain-conta 81.3 5.9 0.0002 32.1 7.8 37 274-310 15-51 (86)
263 3rau_A Tyrosine-protein phosph 80.8 50 0.0017 33.3 18.0 36 274-309 251-286 (363)
264 3mkq_A Coatomer beta'-subunit; 80.7 2.1 7.1E-05 45.9 6.4 48 207-259 658-707 (814)
265 3efz_A 14-3-3 protein; 14-3-3, 80.0 3.4 0.00012 40.5 7.0 71 233-303 149-225 (268)
266 1wfd_A Hypothetical protein 15 79.0 14 0.00047 30.2 9.4 37 274-310 14-50 (93)
267 2dl1_A Spartin; SPG20, MIT, st 76.7 20 0.0007 30.7 10.0 78 275-377 22-99 (116)
268 2wpv_A GET4, UPF0363 protein Y 76.0 65 0.0022 31.9 18.4 87 214-300 115-213 (312)
269 2w2u_A Hypothetical P60 katani 75.8 14 0.00048 29.6 8.4 37 274-310 18-54 (83)
270 4b4t_O 26S proteasome regulato 75.1 21 0.00072 36.3 11.7 99 206-304 90-198 (393)
271 2uy1_A Cleavage stimulation fa 74.6 47 0.0016 34.4 14.5 77 216-301 303-380 (493)
272 1deq_A Fibrinogen (alpha chain 74.4 33 0.0011 35.1 12.5 49 247-295 63-111 (390)
273 2v6y_A AAA family ATPase, P60 73.2 6.8 0.00023 31.4 5.9 36 275-310 11-46 (83)
274 2akf_A Coronin-1A; coiled coil 71.0 5.3 0.00018 26.1 3.7 28 350-377 3-30 (32)
275 3mkq_A Coatomer beta'-subunit; 70.4 51 0.0017 35.0 13.8 21 236-256 726-746 (814)
276 1fxk_C Protein (prefoldin); ar 69.8 1.3 4.4E-05 38.4 0.9 69 241-312 19-107 (133)
277 3re2_A Predicted protein; meni 68.8 13 0.00043 38.3 7.9 72 231-305 253-326 (472)
278 3na7_A HP0958; flagellar bioge 68.0 76 0.0026 30.1 13.2 27 293-319 90-116 (256)
279 4g26_A Pentatricopeptide repea 67.5 19 0.00065 37.6 9.5 84 206-302 84-167 (501)
280 3u84_A Menin; MLL, JUND, ledgf 64.1 43 0.0015 35.0 10.8 73 231-306 275-349 (550)
281 2rpa_A Katanin P60 ATPase-cont 63.9 10 0.00035 30.3 5.0 35 278-312 15-49 (78)
282 4gq4_A Menin; tumor suppressor 62.3 54 0.0019 34.2 11.2 84 217-305 248-333 (489)
283 3ax2_A Mitochondrial import re 62.2 17 0.00059 28.6 6.0 32 64-95 15-46 (73)
284 1om2_A Protein (mitochondrial 60.5 16 0.00054 30.3 5.7 36 61-96 15-50 (95)
285 2ymb_A MITD1, MIT domain-conta 59.9 1.9 6.4E-05 42.1 0.0 61 61-121 18-79 (257)
286 3esl_A Checkpoint serine/threo 58.7 61 0.0021 30.3 10.1 86 213-305 58-145 (202)
287 2lw1_A ABC transporter ATP-bin 58.3 21 0.0007 28.8 6.1 32 349-380 18-49 (89)
288 2rpa_A Katanin P60 ATPase-cont 54.4 13 0.00046 29.6 4.2 39 63-101 9-47 (78)
289 2wvi_A Mitotic checkpoint seri 54.2 17 0.00057 33.0 5.3 88 213-313 44-134 (164)
290 2xze_A STAM-binding protein; h 53.8 58 0.002 28.7 8.7 42 231-273 38-79 (146)
291 4h7y_A Dual specificity protei 53.5 24 0.00081 32.0 6.1 51 206-263 74-124 (161)
292 4gns_B Protein CSD3, chitin bi 52.9 11 0.00037 42.2 4.6 55 68-130 339-393 (754)
293 4a1g_A Mitotic checkpoint seri 52.3 17 0.00057 32.6 4.9 90 212-314 48-140 (152)
294 1ya0_A SMG-7 transcript varian 51.2 18 0.00061 38.3 5.8 50 65-122 151-200 (497)
295 3myv_A SUSD superfamily protei 48.6 19 0.00064 37.1 5.4 56 249-304 164-219 (454)
296 2ff4_A Probable regulatory pro 48.5 1.3E+02 0.0044 30.1 11.5 48 66-121 171-218 (388)
297 2l5g_B Putative uncharacterize 48.0 30 0.001 24.4 4.5 31 348-378 11-41 (42)
298 2wb7_A PT26-6P; extra chromoso 46.2 32 0.0011 36.5 6.6 43 249-291 448-490 (526)
299 3kae_A CDC27, possible protein 45.9 1.5E+02 0.0053 27.5 10.3 72 231-304 60-143 (242)
300 4aez_C MAD3, mitotic spindle c 45.6 18 0.00062 34.4 4.3 80 213-305 98-180 (223)
301 3mq9_A Bone marrow stromal ant 45.1 2.1E+02 0.0073 29.0 12.8 26 350-375 440-465 (471)
302 3kez_A Putative sugar binding 44.9 19 0.00065 37.2 4.8 56 249-304 170-225 (461)
303 2dl1_A Spartin; SPG20, MIT, st 44.7 72 0.0025 27.3 7.5 76 232-317 21-99 (116)
304 1om2_A Protein (mitochondrial 43.3 26 0.00089 29.0 4.3 29 236-264 23-51 (95)
305 2uy1_A Cleavage stimulation fa 43.1 63 0.0022 33.4 8.5 44 219-262 199-242 (493)
306 4b4t_O 26S proteasome regulato 42.9 2.7E+02 0.0093 27.9 14.6 58 206-263 141-199 (393)
307 3mq7_A Bone marrow stromal ant 41.7 65 0.0022 27.6 6.6 28 348-375 73-100 (121)
308 3spa_A Mtrpol, DNA-directed RN 41.7 1.1E+02 0.0037 35.7 10.5 64 233-303 165-229 (1134)
309 2xze_A STAM-binding protein; h 40.4 37 0.0013 29.9 5.3 46 60-106 34-79 (146)
310 3mcx_A SUSD superfamily protei 40.0 22 0.00074 36.8 4.3 55 249-303 176-230 (477)
311 3mkq_B Coatomer subunit alpha; 39.4 42 0.0014 30.7 5.6 54 242-308 14-67 (177)
312 1fxk_C Protein (prefoldin); ar 39.3 95 0.0033 26.3 7.7 23 297-319 85-107 (133)
313 3iqc_A FLIS, flagellar protein 38.0 1.4E+02 0.0047 25.7 8.5 45 63-107 33-77 (131)
314 3ax2_A Mitochondrial import re 37.9 23 0.00078 27.9 3.0 28 236-263 20-47 (73)
315 3spa_A Mtrpol, DNA-directed RN 36.9 61 0.0021 37.7 7.5 68 231-302 125-192 (1134)
316 3snx_A SUSD homolog, putative 36.7 37 0.0013 35.1 5.4 55 250-304 161-220 (460)
317 4fm3_A Uncharacterized hypothe 36.3 1E+02 0.0034 25.6 6.8 32 230-261 31-62 (98)
318 4fhn_B Nucleoporin NUP120; pro 36.2 57 0.0019 37.7 7.3 70 236-305 845-929 (1139)
319 1m1j_A Fibrinogen alpha subuni 35.9 1.8E+02 0.006 30.6 10.1 19 354-372 133-151 (491)
320 3fse_A Two-domain protein cont 34.6 3.1E+02 0.011 27.5 11.7 91 292-391 239-334 (365)
321 3lpz_A GET4 (YOR164C homolog); 34.2 3.7E+02 0.012 26.9 20.7 86 215-300 118-212 (336)
322 3lew_A SUSD-like carbohydrate 33.4 50 0.0017 34.4 5.8 55 250-304 175-232 (495)
323 2zan_A Vacuolar protein sortin 33.2 9 0.00031 39.5 0.0 50 62-111 7-58 (444)
324 4abx_A DNA repair protein RECN 32.3 1.5E+02 0.0051 26.4 8.1 97 252-374 68-164 (175)
325 3trt_A Vimentin; cytoskeleton, 31.8 1.7E+02 0.0059 22.3 7.9 26 348-373 51-76 (77)
326 2rkl_A Vacuolar protein sortin 31.7 99 0.0034 22.9 5.4 37 61-97 15-51 (53)
327 1dip_A Delta-sleep-inducing pe 31.4 81 0.0028 24.9 5.2 36 349-392 11-46 (78)
328 2zdi_C Prefoldin subunit alpha 30.6 1.2E+02 0.0042 26.3 7.1 17 250-266 39-55 (151)
329 1vh6_A Flagellar protein FLIS; 29.7 81 0.0028 27.7 5.7 58 63-120 30-93 (145)
330 4gq2_M Nucleoporin NUP120; bet 29.7 61 0.0021 36.8 6.0 70 233-303 841-925 (950)
331 2zqm_A Prefoldin beta subunit 29.5 48 0.0016 27.3 4.0 97 231-365 14-110 (117)
332 2k48_A Nucleoprotein; viral pr 29.1 2.5E+02 0.0087 23.5 8.1 26 352-377 74-99 (107)
333 1o3u_A Conserved hypothetical 28.8 1E+02 0.0034 26.2 6.0 36 62-97 12-47 (135)
334 3na7_A HP0958; flagellar bioge 28.7 3.6E+02 0.012 25.3 10.6 25 351-375 148-172 (256)
335 2oo2_A Hypothetical protein AF 28.5 81 0.0028 25.5 4.9 32 60-91 29-60 (86)
336 3eab_A Spastin; spastin, MIT, 27.9 57 0.002 26.6 4.0 34 275-308 16-52 (89)
337 1orj_A Flagellar protein FLIS; 27.8 1E+02 0.0035 26.6 5.8 43 63-105 26-72 (130)
338 2pmr_A Uncharacterized protein 27.4 86 0.003 25.4 4.9 35 60-94 33-67 (87)
339 4fhn_B Nucleoporin NUP120; pro 27.3 2.4E+02 0.0083 32.4 10.6 63 232-298 898-961 (1139)
340 3t5x_A PCI domain-containing p 27.3 53 0.0018 30.2 4.2 33 273-305 12-44 (203)
341 1wol_A ST0689, 122AA long cons 27.0 1.2E+02 0.004 25.1 6.0 37 61-97 6-42 (122)
342 2cfu_A SDSA1; SDS-hydrolase, l 26.8 1.1E+02 0.0039 33.1 7.4 51 66-124 449-499 (658)
343 3tnu_B Keratin, type II cytosk 26.7 86 0.003 26.7 5.2 73 288-374 24-96 (129)
344 2yy0_A C-MYC-binding protein; 26.1 97 0.0033 22.7 4.6 29 347-375 20-48 (53)
345 1deq_A Fibrinogen (alpha chain 26.0 5.4E+02 0.019 26.2 12.5 62 205-266 62-124 (390)
346 1lq7_A Alpha3W; three helix bu 25.9 73 0.0025 23.6 3.8 19 354-372 26-44 (67)
347 3hdx_A SUSD homolog, SUSD supe 25.9 73 0.0025 32.8 5.4 30 274-303 196-225 (478)
348 4b6x_A AVRRPS4, avirulence pro 25.3 1.4E+02 0.0048 23.9 5.6 34 348-382 24-57 (90)
349 2wm9_A Dedicator of cytokinesi 25.1 2E+02 0.0067 29.5 8.5 74 234-307 12-120 (428)
350 2jpu_A ORF C02003 protein; sol 25.0 69 0.0024 27.9 4.2 37 63-99 4-40 (129)
351 2a9u_A Ubiquitin carboxyl-term 24.7 3.5E+02 0.012 23.6 9.2 43 231-275 40-82 (144)
352 2wq1_A General control protein 24.5 35 0.0012 22.8 1.7 15 349-363 17-31 (33)
353 2p32_A Heat shock 70 kDa prote 24.4 3E+02 0.01 22.7 8.4 29 347-375 47-83 (120)
354 2e2a_A Protein (enzyme IIA); h 24.4 1.4E+02 0.0047 24.9 5.8 36 65-100 19-54 (105)
355 1zb1_A BRO1 protein; AIP1, BRO 24.4 1.7E+02 0.0058 29.5 7.7 54 232-286 129-190 (392)
356 2rkl_A Vacuolar protein sortin 24.2 1.3E+02 0.0045 22.2 4.9 34 232-265 19-52 (53)
357 4ady_A RPN2, 26S proteasome re 24.2 5.2E+02 0.018 29.6 12.2 59 213-287 216-274 (963)
358 1ufb_A TT1696 protein; structu 24.2 1.2E+02 0.0042 25.0 5.7 35 62-96 7-41 (127)
359 1wcr_A PTS system, N, N'-diace 23.9 1.4E+02 0.0049 24.7 5.8 36 65-100 17-52 (103)
360 3t5v_B Nuclear mRNA export pro 23.7 84 0.0029 32.8 5.4 71 234-306 177-252 (455)
361 2lw1_A ABC transporter ATP-bin 23.6 2.2E+02 0.0074 22.6 6.7 27 348-374 58-84 (89)
362 3tnu_A Keratin, type I cytoske 23.3 80 0.0027 27.1 4.3 23 352-374 76-98 (131)
363 3hdx_A SUSD homolog, SUSD supe 23.1 3.6E+02 0.012 27.5 10.1 34 229-262 193-226 (478)
364 4abx_A DNA repair protein RECN 23.1 1.2E+02 0.004 27.1 5.6 73 212-291 69-141 (175)
365 2hsb_A Hypothetical UPF0332 pr 23.0 1.6E+02 0.0055 24.1 6.2 36 61-96 7-42 (126)
366 3nmd_A CGMP dependent protein 22.8 2.8E+02 0.0095 21.7 6.9 26 349-374 43-68 (72)
367 3mv2_A Coatomer subunit alpha; 22.5 2.4E+02 0.008 28.2 8.1 49 62-110 110-158 (325)
368 1fxk_A Prefoldin; archaeal pro 22.3 81 0.0028 25.5 4.0 73 236-314 14-86 (107)
369 3l8r_A PTCA, putative PTS syst 21.9 1.6E+02 0.0054 25.2 5.8 36 65-100 36-71 (120)
370 3k1s_A PTS system, cellobiose- 21.9 1.6E+02 0.0056 24.7 5.8 36 65-100 21-56 (109)
371 3f6n_A Virion-associated prote 21.7 99 0.0034 26.7 4.4 23 350-372 6-28 (129)
372 3ghg_A Fibrinogen alpha chain; 21.6 4.8E+02 0.016 27.8 10.4 45 275-319 99-143 (562)
373 3jq1_A SUSD superfamily protei 21.5 58 0.002 33.7 3.6 27 276-302 181-207 (481)
374 2zdi_C Prefoldin subunit alpha 21.3 1.7E+02 0.0058 25.4 6.2 28 285-312 90-117 (151)
375 4fi5_A Nucleoprotein; structur 21.3 3.8E+02 0.013 22.7 8.1 26 352-377 61-86 (113)
376 3ghg_A Fibrinogen alpha chain; 21.2 7.6E+02 0.026 26.3 11.9 27 293-319 131-157 (562)
377 3c3g_A Alpha/beta peptide with 21.0 60 0.0021 21.7 2.3 15 349-363 17-31 (33)
378 3qnk_A Putative lipoprotein; a 20.8 1E+02 0.0034 32.2 5.3 30 274-303 181-210 (517)
379 3cvf_A Homer-3, homer protein 20.7 3.2E+02 0.011 21.7 7.3 22 354-375 46-67 (79)
380 2vkj_A TM1634; membrane protei 20.6 2.8E+02 0.0097 22.8 6.7 48 232-285 52-100 (106)
381 4fx5_A VON willebrand factor t 20.6 1.3E+02 0.0046 31.1 6.1 38 62-99 378-415 (464)
382 3hh0_A Transcriptional regulat 20.4 1E+02 0.0034 26.8 4.4 44 349-392 90-133 (146)
383 2xdj_A Uncharacterized protein 20.2 3.3E+02 0.011 21.6 8.6 28 349-376 30-57 (83)
384 1m1j_B Fibrinogen beta chain; 20.2 3.4E+02 0.012 28.4 9.0 25 352-376 167-191 (464)
No 1
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.81 E-value=7.1e-19 Score=187.67 Aligned_cols=157 Identities=15% Similarity=0.026 Sum_probs=148.7
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCC
Q 011759 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQ 141 (478)
Q Consensus 62 ~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~ 141 (478)
.+..+..+++....+..+|+|++|..+|.++|+++..++|+.||.++.+|+++|.+|..+
T Consensus 305 ~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~-------------------- 364 (490)
T 3n71_A 305 MIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYL-------------------- 364 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHT--------------------
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh--------------------
Confidence 355688888999999999999999999999999999999999999999999999999865
Q ss_pred CCCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHH
Q 011759 142 GSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAI 221 (478)
Q Consensus 142 ~~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I 221 (478)
++++.|..+++.++.|
T Consensus 365 ----------------------------------------------------------------g~~~eA~~~~~~aL~i 380 (490)
T 3n71_A 365 ----------------------------------------------------------------QAYEEASHYARRMVDG 380 (490)
T ss_dssp ----------------------------------------------------------------TCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------------------cCHHHHHHHHHHHHHH
Confidence 4688899999999999
Q ss_pred HHHhcC-CCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHH
Q 011759 222 AEKHWG-DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQK 300 (478)
Q Consensus 222 ~ek~l~-~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ek 300 (478)
+++.++ +|+.++.+|++||.+|..+|+|++|+.+|++||+|++..+|++||.+++++.+|+.++..+++|++|...|++
T Consensus 381 ~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~ 460 (490)
T 3n71_A 381 YMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHK 460 (490)
T ss_dssp HHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988 6899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH
Q 011759 301 AI 302 (478)
Q Consensus 301 AL 302 (478)
+.
T Consensus 461 ~~ 462 (490)
T 3n71_A 461 MR 462 (490)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 2
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.76 E-value=1.3e-16 Score=148.44 Aligned_cols=160 Identities=20% Similarity=0.186 Sum_probs=149.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCC
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~ 143 (478)
..+..+..+|..++..|+|++|+.+|.+++++....+|..+|..+.+|+.+|.+++..
T Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------------------- 98 (283)
T 3edt_B 41 DVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKR---------------------- 98 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTT----------------------
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHh----------------------
Confidence 3577889999999999999999999999999999999999999999999999999864
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
++++.|.++|+.|+.++.
T Consensus 99 --------------------------------------------------------------g~~~~A~~~~~~al~~~~ 116 (283)
T 3edt_B 99 --------------------------------------------------------------GKYKEAEPLCKRALEIRE 116 (283)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------ccHHHHHHHHHHHHHHHH
Confidence 467889999999999998
Q ss_pred HhcCC-CchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHH
Q 011759 224 KHWGD-SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (478)
Q Consensus 224 k~l~~-~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL 302 (478)
+..+. ++..+.+|.+||.++...|+|++|+.+|++++.+.+...+++++..+.++++||.+|...|++++|+.+|++++
T Consensus 117 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l 196 (283)
T 3edt_B 117 KVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEIL 196 (283)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 87664 57889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 011759 303 SVCKS 307 (478)
Q Consensus 303 ~I~k~ 307 (478)
.+...
T Consensus 197 ~~~~~ 201 (283)
T 3edt_B 197 TRAHE 201 (283)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98654
No 3
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.70 E-value=3e-15 Score=141.77 Aligned_cols=160 Identities=20% Similarity=0.145 Sum_probs=148.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCC
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~ 143 (478)
..+..+..+|..++..|+|++|+.+|.+++++.....|..++..+.+|+.+|.+++..
T Consensus 25 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~---------------------- 82 (311)
T 3nf1_A 25 ARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQ---------------------- 82 (311)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHC----------------------
Confidence 4578899999999999999999999999999999999999999999999999999865
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
++++.|.++|+.++.++.
T Consensus 83 --------------------------------------------------------------g~~~~A~~~~~~al~~~~ 100 (311)
T 3nf1_A 83 --------------------------------------------------------------NKYKDAANLLNDALAIRE 100 (311)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------CCHHHHHHHHHHHHHHHH
Confidence 457788999999999988
Q ss_pred HhcC-CCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHH
Q 011759 224 KHWG-DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (478)
Q Consensus 224 k~l~-~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL 302 (478)
+..+ ..+..+.+|..||.++...|+|++|+.+|++++.+.+..++.+++..+.++++||.+|...|++++|+.+|++++
T Consensus 101 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~ 180 (311)
T 3nf1_A 101 KTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRAL 180 (311)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 8754 356789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 011759 303 SVCKS 307 (478)
Q Consensus 303 ~I~k~ 307 (478)
.+++.
T Consensus 181 ~~~~~ 185 (311)
T 3nf1_A 181 EIYQT 185 (311)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98543
No 4
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.69 E-value=2.3e-15 Score=139.99 Aligned_cols=158 Identities=18% Similarity=0.087 Sum_probs=142.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCC
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~ 143 (478)
..+..+..+|..++..|+|++|+.+|.+++.+..+.+|..+|..+.+|+.+|.+++.+
T Consensus 83 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~---------------------- 140 (283)
T 3edt_B 83 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQ---------------------- 140 (283)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTT----------------------
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHc----------------------
Confidence 4577889999999999999999999999999999999999999999999999999864
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
++++.|+++|+.++.++.
T Consensus 141 --------------------------------------------------------------g~~~~A~~~~~~al~~~~ 158 (283)
T 3edt_B 141 --------------------------------------------------------------GKAEEVEYYYRRALEIYA 158 (283)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------CCHHHHHHHHHHHHHHHH
Confidence 467889999999999998
Q ss_pred HhcC-CCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh------------------------------------
Q 011759 224 KHWG-DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERM------------------------------------ 266 (478)
Q Consensus 224 k~l~-~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~l------------------------------------ 266 (478)
+..+ ..+..+.++.+||.++..+|+|++|+..|++++.+....
T Consensus 159 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T 3edt_B 159 TRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYG 238 (283)
T ss_dssp HHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC--------
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 8765 357789999999999999999999999999999986542
Q ss_pred -----cCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Q 011759 267 -----VEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 267 -----lg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~ 305 (478)
++..++..+.++++||.+|...|++++|+.+|++++++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 282 (283)
T 3edt_B 239 SWYKACKVDSPTVNTTLRSLGALYRRQGKLEAAHTLEDCASRNR 282 (283)
T ss_dssp ----CCCCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Confidence 234679999999999999999999999999999999764
No 5
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.68 E-value=6.5e-16 Score=162.45 Aligned_cols=135 Identities=20% Similarity=0.164 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCC
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~ 143 (478)
..+..++..+++....|+|++|..+|.++|+++.+.+|+.||.++.+|+++|.+|..+
T Consensus 296 ~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~---------------------- 353 (433)
T 3qww_A 296 RYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYM---------------------- 353 (433)
T ss_dssp HHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhh----------------------
Confidence 3566777888888889999999999999999999999999999999999999999865
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
++++.|..+++.++.|++
T Consensus 354 --------------------------------------------------------------g~~~eA~~~~~~aL~i~~ 371 (433)
T 3qww_A 354 --------------------------------------------------------------QDWEGALKYGQKIIKPYS 371 (433)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------cCHHHHHHHHHHHHHHHH
Confidence 468889999999999999
Q ss_pred HhcC-CCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 011759 224 KHWG-DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC 282 (478)
Q Consensus 224 k~l~-~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG 282 (478)
+.++ +|+.++.+|++||.+|..+|+|++|+.+|++||+|++..+|++||.+++++.+|.
T Consensus 372 ~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l~ 431 (433)
T 3qww_A 372 KHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQEIE 431 (433)
T ss_dssp HHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred HHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHh
Confidence 9988 6899999999999999999999999999999999999999999999999998874
No 6
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.68 E-value=5.2e-15 Score=140.14 Aligned_cols=159 Identities=20% Similarity=0.190 Sum_probs=146.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCC
Q 011759 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (478)
Q Consensus 65 ~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~ 144 (478)
.+..+..+|..++..|+|++|+.+|.+++++....+|..+|..+.+|+.+|.+++..
T Consensus 68 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------------------- 124 (311)
T 3nf1_A 68 VATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKR----------------------- 124 (311)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTT-----------------------
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHc-----------------------
Confidence 466788999999999999999999999999999999999999999999999999854
Q ss_pred CccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011759 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (478)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek 224 (478)
++++.|.++|+.++.++.+
T Consensus 125 -------------------------------------------------------------g~~~~A~~~~~~a~~~~~~ 143 (311)
T 3nf1_A 125 -------------------------------------------------------------GKYKEAEPLCKRALEIREK 143 (311)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------------------------CcHHHHHHHHHHHHHHHHH
Confidence 4678899999999999887
Q ss_pred hcC-CCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Q 011759 225 HWG-DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (478)
Q Consensus 225 ~l~-~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~ 303 (478)
..+ .++..+.++.+||.++...|+|++|+.+|++++.+.+...+.+++..+.++++||.+|...|++++|+.+|++++.
T Consensus 144 ~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 223 (311)
T 3nf1_A 144 VLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILT 223 (311)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 744 3577899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH
Q 011759 304 VCKS 307 (478)
Q Consensus 304 I~k~ 307 (478)
+...
T Consensus 224 ~~~~ 227 (311)
T 3nf1_A 224 RAHE 227 (311)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8655
No 7
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.65 E-value=2.1e-15 Score=134.73 Aligned_cols=170 Identities=18% Similarity=0.167 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCC
Q 011759 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (478)
Q Consensus 65 ~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~ 144 (478)
.+..++++|..++.+|+|++|+.+|.+|+++ +|....+|+.+|.+++.+++.+..+--. .
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~~~~~~a~~~~--~---------- 63 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKA--------DPNNVETLLKLGKTYMDIGLPNDAIESL--K---------- 63 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHH--H----------
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHCCCHHHHHHHH--H----------
Confidence 3667899999999999999999999999998 7999999999999999986553321100 0
Q ss_pred CccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011759 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (478)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek 224 (478)
... ...+... .. . ...+.......+++.|.+.+..+..+
T Consensus 64 --~~~--~~~~~~~------~~--------~--------------------~~~~~~~~~~~~~~~a~~~~~~a~~~--- 102 (184)
T 3vtx_A 64 --KFV--VLDTTSA------EA--------Y--------------------YILGSANFMIDEKQAAIDALQRAIAL--- 102 (184)
T ss_dssp --HHH--HHCCCCH------HH--------H--------------------HHHHHHHHHTTCHHHHHHHHHHHHHH---
T ss_pred --HHH--hcCchhH------HH--------H--------------------HHHHHHHHHcCCHHHHHHHHHHHHHh---
Confidence 000 0000000 00 0 00000001124556666666655543
Q ss_pred hcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 225 ~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
.+....++..||.++..+|+|++|+.+|++++++.+ ..+.+|++||.+|..+|++++|+.+|++||++
T Consensus 103 ----~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p--------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 170 (184)
T 3vtx_A 103 ----NTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKP--------GFIRAYQSIGLAYEGKGLRDEAVKYFKKALEK 170 (184)
T ss_dssp ----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred ----CccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcc--------hhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhC
Confidence 345678999999999999999999999999998843 33689999999999999999999999999987
Q ss_pred HHH
Q 011759 305 CKS 307 (478)
Q Consensus 305 ~k~ 307 (478)
-..
T Consensus 171 ~p~ 173 (184)
T 3vtx_A 171 EEK 173 (184)
T ss_dssp THH
T ss_pred Ccc
Confidence 554
No 8
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.64 E-value=2.4e-15 Score=157.75 Aligned_cols=139 Identities=8% Similarity=0.004 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCC
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~ 143 (478)
..+..++..-..+..+|+|++|..+|.++|+++...+|+.||.++.+|.++|.+|..+
T Consensus 285 ~~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~---------------------- 342 (429)
T 3qwp_A 285 KEVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINL---------------------- 342 (429)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHH----------------------
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhh----------------------
Confidence 3466777777788899999999999999999999999999999999999999999865
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
++++.|..+++.++.||+
T Consensus 343 --------------------------------------------------------------g~~~eA~~~~~~~L~i~~ 360 (429)
T 3qwp_A 343 --------------------------------------------------------------GLLEEALFYGTRTMEPYR 360 (429)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------ccHHHHHHHHHHHHHhHH
Confidence 468889999999999999
Q ss_pred HhcC-CCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 011759 224 KHWG-DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 286 (478)
Q Consensus 224 k~l~-~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~ 286 (478)
+.++ .|+.++..|++||.+|..+|+|++|+.+|++||+|++..+|++||.+++++.+|+.|+.
T Consensus 361 ~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~ 424 (429)
T 3qwp_A 361 IFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDA 424 (429)
T ss_dssp HHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHH
T ss_pred HHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Confidence 9988 68999999999999999999999999999999999999999999999999999999875
No 9
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.63 E-value=5.5e-15 Score=147.94 Aligned_cols=151 Identities=21% Similarity=0.298 Sum_probs=133.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCCccc
Q 011759 69 LMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDS 148 (478)
Q Consensus 69 L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~de~ 148 (478)
++-+|..++..|+|++|+.+|.+|+++.... ...+..+.+|+++|.+++..
T Consensus 106 ~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~~~~~--------------------------- 156 (383)
T 3ulq_A 106 NFFRGMYELDQREYLSAIKFFKKAESKLIFV--KDRIEKAEFFFKMSESYYYM--------------------------- 156 (383)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTGGGC--CCHHHHHHHHHHHHHHHHHT---------------------------
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhC--CCHHHHHHHHHHHHHHHHHc---------------------------
Confidence 3349999999999999999999999985443 34577999999999999875
Q ss_pred cccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCC
Q 011759 149 VKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGD 228 (478)
Q Consensus 149 ~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~l~~ 228 (478)
++++.|.+.++.|+.++.+..+.
T Consensus 157 ---------------------------------------------------------~~~~~A~~~~~~al~~~~~~~~~ 179 (383)
T 3ulq_A 157 ---------------------------------------------------------KQTYFSMDYARQAYEIYKEHEAY 179 (383)
T ss_dssp ---------------------------------------------------------TCHHHHHHHHHHHHHHHHTCSTT
T ss_pred ---------------------------------------------------------CCHHHHHHHHHHHHHHHHhCccc
Confidence 45778999999999999988655
Q ss_pred CchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHH
Q 011759 229 SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKS 307 (478)
Q Consensus 229 ~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k~ 307 (478)
.+..+.+|++||.++..+|+|++|+.+|++||.+.++. .+++.++.+|++||.+|...|++++|+.+|++|+.+.+.
T Consensus 180 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 256 (383)
T 3ulq_A 180 NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAE--KQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEE 256 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc--CChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Confidence 67889999999999999999999999999999999987 467889999999999999999999999999999997553
No 10
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.63 E-value=3.5e-14 Score=120.44 Aligned_cols=155 Identities=13% Similarity=0.128 Sum_probs=135.2
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCC
Q 011759 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQG 142 (478)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~ 142 (478)
...+..+..+|..++..|+|++|+.+|.+++++..... .....+.+|+.+|.+++..
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~~~~~--------------------- 62 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFG--DKAAERIAYSNLGNAYIFL--------------------- 62 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHT---------------------
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhC--CchHHHHHHHHHHHHHHHc---------------------
Confidence 35688899999999999999999999999999976632 2466778999999999865
Q ss_pred CCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011759 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 222 (478)
Q Consensus 143 ~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ 222 (478)
++++.|.+.++.++.++
T Consensus 63 ---------------------------------------------------------------g~~~~A~~~~~~a~~~~ 79 (164)
T 3ro3_A 63 ---------------------------------------------------------------GEFETASEYYKKTLLLA 79 (164)
T ss_dssp ---------------------------------------------------------------TCHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------CCHHHHHHHHHHHHHHH
Confidence 45788999999999998
Q ss_pred HHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHH
Q 011759 223 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (478)
Q Consensus 223 ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL 302 (478)
.+. +.....+.++.+||.++...|+|++|+.+|++++.+.+... +++..+.++++||.+|...|++++|+.+|++++
T Consensus 80 ~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~ 156 (164)
T 3ro3_A 80 RQL-KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELK--DRIGEGRACWSLGNAYTALGNHDQAMHFAEKHL 156 (164)
T ss_dssp HHT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHh-CCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcc--chHhHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 765 33456789999999999999999999999999999998764 467789999999999999999999999999999
Q ss_pred HHHH
Q 011759 303 SVCK 306 (478)
Q Consensus 303 ~I~k 306 (478)
.+.+
T Consensus 157 ~~~~ 160 (164)
T 3ro3_A 157 EISR 160 (164)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 8864
No 11
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.62 E-value=3.6e-14 Score=127.19 Aligned_cols=155 Identities=17% Similarity=0.058 Sum_probs=136.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCC
Q 011759 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (478)
Q Consensus 65 ~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~ 144 (478)
.+..+..+|..++..|+|++|..+|.+++++.... | ..+..+.+|+++|.+++..
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-~-~~~~~~~~~~~l~~~~~~~----------------------- 79 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKS-G-DHTAEHRALHQVGMVERMA----------------------- 79 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTT-C-CHHHHHHHHHHHHHHHHHT-----------------------
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHc-C-CcHHHHHHHHHHHHHHHHc-----------------------
Confidence 47788999999999999999999999999987643 2 4678899999999999865
Q ss_pred CccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011759 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (478)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek 224 (478)
++++.|.+.++.|+.++.+
T Consensus 80 -------------------------------------------------------------g~~~~A~~~~~~al~~~~~ 98 (203)
T 3gw4_A 80 -------------------------------------------------------------GNWDAARRCFLEERELLAS 98 (203)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------------------------CCHHHHHHHHHHHHHHHHH
Confidence 4578899999999999986
Q ss_pred hcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 225 ~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
..+.....+.++.+||.++..+|+|++|+.+|++++.+.+... +....+.++++||.+|...|++++|+.+|++|+.+
T Consensus 99 ~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 176 (203)
T 3gw4_A 99 LPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQAD--DQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDI 176 (203)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcc--chHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHH
Confidence 6544457899999999999999999999999999999987653 45567899999999999999999999999999998
Q ss_pred HHH
Q 011759 305 CKS 307 (478)
Q Consensus 305 ~k~ 307 (478)
.+.
T Consensus 177 ~~~ 179 (203)
T 3gw4_A 177 FAE 179 (203)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 12
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.61 E-value=1e-14 Score=146.23 Aligned_cols=154 Identities=18% Similarity=0.131 Sum_probs=136.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~ 145 (478)
.--++.+|..++..|+|++|+.+|.+|+++.... ...+..+.+|+++|.+++.+
T Consensus 101 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~y~~~------------------------ 154 (378)
T 3q15_A 101 YYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFV--SDDIEKAEFHFKVAEAYYHM------------------------ 154 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGC--CCHHHHHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhC--CChHHHHHHHHHHHHHHHHc------------------------
Confidence 4467789999999999999999999999986554 23588999999999999875
Q ss_pred ccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011759 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (478)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~ 225 (478)
+++..|...++.|+.++.+.
T Consensus 155 ------------------------------------------------------------~~~~~A~~~~~~al~~~~~~ 174 (378)
T 3q15_A 155 ------------------------------------------------------------KQTHVSMYHILQALDIYQNH 174 (378)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHHHHTS
T ss_pred ------------------------------------------------------------CCcHHHHHHHHHHHHHHHhC
Confidence 45778999999999999987
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Q 011759 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 226 l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~ 305 (478)
.+.....+.+|++||.++..+|+|++|+.+|++||.+.+++ .+.+.++.+|++||.+|...|++++|+.+|++|+.++
T Consensus 175 ~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~ 252 (378)
T 3q15_A 175 PLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDI--QNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVS 252 (378)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 65556789999999999999999999999999999999887 3556789999999999999999999999999999976
Q ss_pred HH
Q 011759 306 KS 307 (478)
Q Consensus 306 k~ 307 (478)
+.
T Consensus 253 ~~ 254 (378)
T 3q15_A 253 RE 254 (378)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 13
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.60 E-value=5.5e-14 Score=140.61 Aligned_cols=156 Identities=13% Similarity=0.100 Sum_probs=139.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCC
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~ 143 (478)
..+..+..+|..++..|+|++|+.+|.+|+++.... +...+..+.+|+++|.+++.+
T Consensus 141 ~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~lg~~~~~~---------------------- 197 (383)
T 3ulq_A 141 EKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEH-EAYNIRLLQCHSLFATNFLDL---------------------- 197 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC-STTHHHHHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC-ccchHHHHHHHHHHHHHHHHh----------------------
Confidence 468889999999999999999999999999997654 555788999999999999875
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
++++.|.+.|+.|+.++.
T Consensus 198 --------------------------------------------------------------g~~~~A~~~~~~al~~~~ 215 (383)
T 3ulq_A 198 --------------------------------------------------------------KQYEDAISHFQKAYSMAE 215 (383)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------cCHHHHHHHHHHHHHHHH
Confidence 468889999999999998
Q ss_pred HhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Q 011759 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (478)
Q Consensus 224 k~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~ 303 (478)
+. ++....+.+|.+||.++..+|+|++|+.+|++||.|.+.... .+..+.++++||.+|...|++++|+.+|++|+.
T Consensus 216 ~~-~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~--~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 292 (383)
T 3ulq_A 216 AE-KQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNI--LPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMA 292 (383)
T ss_dssp HT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC--GGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred Hc-CChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc--chhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 76 445678999999999999999999999999999999987642 266799999999999999999999999999999
Q ss_pred HHHH
Q 011759 304 VCKS 307 (478)
Q Consensus 304 I~k~ 307 (478)
+.+.
T Consensus 293 ~~~~ 296 (383)
T 3ulq_A 293 YSQK 296 (383)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9754
No 14
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.58 E-value=2.3e-14 Score=159.52 Aligned_cols=174 Identities=18% Similarity=0.227 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCC
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~ 143 (478)
..+..|.++|..++.+|+|++|+.+|.+|+++ +|+.+.+|+++|.+|+.+++.+.++--. +
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l--------~P~~~~a~~nLg~~l~~~g~~~eA~~~~--~--------- 67 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEV--------FPEFAAAHSNLASVLQQQGKLQEALMHY--K--------- 67 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSCCHHHHHHHHHHHHHTTCHHHHHHHH--H---------
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHH--H---------
Confidence 45889999999999999999999999999999 7999999999999999987764331100 0
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
..+. .++....+- -..+......++++.|.+.|+.|+.+
T Consensus 68 ---~Al~--l~P~~~~a~----------------------------------~nLg~~l~~~g~~~~A~~~~~kAl~l-- 106 (723)
T 4gyw_A 68 ---EAIR--ISPTFADAY----------------------------------SNMGNTLKEMQDVQGALQCYTRAIQI-- 106 (723)
T ss_dssp ---HHHH--HCTTCHHHH----------------------------------HHHHHHHHHTTCHHHHHHHHHHHHHH--
T ss_pred ---HHHH--hCCCCHHHH----------------------------------HHHHHHHHHcCCHHHHHHHHHHHHHh--
Confidence 0000 000000000 00001112235666676666666654
Q ss_pred HhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Q 011759 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (478)
Q Consensus 224 k~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~ 303 (478)
.+..+.+|++||.++..+|+|++|+.+|++||++... .+.+|++||.+|..++++++|+++|+++++
T Consensus 107 -----~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~--------~~~a~~~L~~~l~~~g~~~~A~~~~~kal~ 173 (723)
T 4gyw_A 107 -----NPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPD--------FPDAYCNLAHCLQIVCDWTDYDERMKKLVS 173 (723)
T ss_dssp -----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC--------CHHHHHHHHHHHHHTTCCTTHHHHHHHHHH
T ss_pred -----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--------ChHHHhhhhhHHHhcccHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999998532 368999999999999999999999999999
Q ss_pred HHHHHHH
Q 011759 304 VCKSRVQ 310 (478)
Q Consensus 304 I~k~rl~ 310 (478)
+....+.
T Consensus 174 l~~~~~~ 180 (723)
T 4gyw_A 174 IVADQLE 180 (723)
T ss_dssp HHHHHHH
T ss_pred hChhHHh
Confidence 9876543
No 15
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.58 E-value=5.5e-14 Score=136.47 Aligned_cols=100 Identities=18% Similarity=0.085 Sum_probs=90.4
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|.++|+.|+.++.+........+.+|.+||.+|..+|+|++|+.+|+++|.+.+..- +...++.+|++||.+|
T Consensus 169 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~--~~~~~~~~~~~lg~~~ 246 (293)
T 3u3w_A 169 GYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRIN--SMALIGQLYYQRGECL 246 (293)
T ss_dssp TCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--BCTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcC--cHHHHHHHHHHHHHHH
Confidence 56889999999999999887566778899999999999999999999999999999998863 5667899999999999
Q ss_pred HcCCC-chHHHHHHHHHHHHHHH
Q 011759 286 EIGSK-PQEAIPYCQKAISVCKS 307 (478)
Q Consensus 286 ~~~~~-~eeAl~~~ekAL~I~k~ 307 (478)
..+|+ +++|+.+|++|+.+++.
T Consensus 247 ~~~g~~~~~A~~~~~~Al~i~~~ 269 (293)
T 3u3w_A 247 RKLEYEEAEIEDAYKKASFFFDI 269 (293)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHhCCcHHHHHHHHHHHHHHHHH
Confidence 99995 69999999999998763
No 16
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.57 E-value=1.1e-14 Score=153.02 Aligned_cols=107 Identities=11% Similarity=0.041 Sum_probs=101.6
Q ss_pred CcChHHHHHHHHHHHHHHHHHhcC-CCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 011759 204 DESDLDLAWKMLDVARAIAEKHWG-DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC 282 (478)
Q Consensus 204 d~ddle~AwE~Le~Ar~I~ek~l~-~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG 282 (478)
..++++.|..+|+.++.|+++.++ +|+.++.++++||.+|..+|+|++|+.+|+++|+|+++.+|++||.+|.+|+|||
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 346789999999999999999988 5899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCchHHHHHHHHHHHHHHHHHH
Q 011759 283 LCLEIGSKPQEAIPYCQKAISVCKSRVQ 310 (478)
Q Consensus 283 ~ay~~~~~~eeAl~~~ekAL~I~k~rl~ 310 (478)
.+|..+|+|++|+.+|++||+|++..++
T Consensus 390 ~~~~~qg~~~eA~~~~~~Al~i~~~~lG 417 (433)
T 3qww_A 390 RLYMGLENKAAGEKALKKAIAIMEVAHG 417 (433)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999887654
No 17
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.57 E-value=1.6e-13 Score=133.77 Aligned_cols=151 Identities=16% Similarity=0.074 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~ 145 (478)
+..+...|..+...|+|++|+++|.+|+++.... | ..+..+.+|+++|.+|..+
T Consensus 37 ~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~-~-~~~~~a~~~~~lg~~~~~~------------------------ 90 (292)
T 1qqe_A 37 ADLCVQAATIYRLRKELNLAGDSFLKAADYQKKA-G-NEDEAGNTYVEAYKCFKSG------------------------ 90 (292)
T ss_dssp HHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh-C-CHHHHHHHHHHHHHHHHHC------------------------
Confidence 3444555678888999999999999999997653 4 3457789999999999865
Q ss_pred ccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011759 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (478)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~ 225 (478)
++++.|..+|+.|+.|+.+.
T Consensus 91 ------------------------------------------------------------g~~~~A~~~~~~Al~l~~~~ 110 (292)
T 1qqe_A 91 ------------------------------------------------------------GNSVNAVDSLENAIQIFTHR 110 (292)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHHHHHT
T ss_pred ------------------------------------------------------------CCHHHHHHHHHHHHHHHHHc
Confidence 45778999999999999765
Q ss_pred cCCCchHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 226 WGDSMEKVDILSALAEVALER-EDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 226 l~~~~~~Ad~~~~LGev~le~-g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
+.....+.+|.+||.+|... |+|++|+.+|++||.|.+... +.+..+.+|++||.+|..+|+|++|+.+|++++.+
T Consensus 111 -g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~--~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 187 (292)
T 1qqe_A 111 -GQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQ--SVALSNKCFIKCADLKALDGQYIEASDIYSKLIKS 187 (292)
T ss_dssp -TCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred -CCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCC--ChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 33456789999999999996 999999999999999998642 33456889999999999999999999999999986
Q ss_pred H
Q 011759 305 C 305 (478)
Q Consensus 305 ~ 305 (478)
.
T Consensus 188 ~ 188 (292)
T 1qqe_A 188 S 188 (292)
T ss_dssp T
T ss_pred H
Confidence 4
No 18
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.55 E-value=1.3e-13 Score=133.91 Aligned_cols=194 Identities=15% Similarity=0.065 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccC--CCCCCcCCCC
Q 011759 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLV--SVPKKEGDSQ 140 (478)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg--~~~~~~~e~~ 140 (478)
......++.++..++..|+|++|.++|.+++++.... .........++.+|..++..++.+.+.-- .+......
T Consensus 72 ~~~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-- 147 (293)
T 2qfc_A 72 IERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYH--PEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLT-- 147 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCC--HHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCC--
T ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCC--hhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhc--
Confidence 4577888889999999999999999999988864331 11245666778888888887654332110 00000000
Q ss_pred CCCCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHH
Q 011759 141 QGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARA 220 (478)
Q Consensus 141 ~~~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~ 220 (478)
..+.... . .. . -..+...-..++++.|+++|+.|+.
T Consensus 148 ---~~~~~~~-------~------~~-----~-----------------------~~lg~~y~~~~~~~~A~~~~~kal~ 183 (293)
T 2qfc_A 148 ---GIDVYQN-------L------YI-----E-----------------------NAIANIYAENGYLKKGIDLFEQILK 183 (293)
T ss_dssp ---SSCTTHH-------H------HH-----H-----------------------HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ---CCchHHH-------H------HH-----H-----------------------HHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 0000000 0 00 0 0000011234789999999999999
Q ss_pred HHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHH-HHHHH
Q 011759 221 IAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEA-IPYCQ 299 (478)
Q Consensus 221 I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeA-l~~~e 299 (478)
++..........+.+|++||.+|..+|+|++|+.+|+++|.+.... .++..++.+|++||.+|...|++++| ..+|+
T Consensus 184 ~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~--~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~ 261 (293)
T 2qfc_A 184 QLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRI--NSMALIGQLYYQRGECLRKLEYEEAEIEDAYK 261 (293)
T ss_dssp HHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhc--CcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 9987755433344899999999999999999999999999998653 35667899999999999999999999 88899
Q ss_pred HHHHHHH
Q 011759 300 KAISVCK 306 (478)
Q Consensus 300 kAL~I~k 306 (478)
+|+.+++
T Consensus 262 ~Al~~~~ 268 (293)
T 2qfc_A 262 KASFFFD 268 (293)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998754
No 19
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.55 E-value=3e-13 Score=135.56 Aligned_cols=154 Identities=14% Similarity=0.102 Sum_probs=136.2
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCC
Q 011759 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQG 142 (478)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~ 142 (478)
...+..+..+|..++..|+|+.|+.+|.+|+++.... +...+..+.+|+++|.+++.+
T Consensus 138 ~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~lg~~y~~~--------------------- 195 (378)
T 3q15_A 138 IEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNH-PLYSIRTIQSLFVIAGNYDDF--------------------- 195 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTS-TTCHHHHHHHHHHHHHHHHHT---------------------
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhC-CCchhhHHHHHHHHHHHHHHh---------------------
Confidence 4568899999999999999999999999999997643 333567899999999999875
Q ss_pred CCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011759 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 222 (478)
Q Consensus 143 ~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ 222 (478)
++++.|.+.|+.|+.++
T Consensus 196 ---------------------------------------------------------------~~~~~A~~~~~~al~~~ 212 (378)
T 3q15_A 196 ---------------------------------------------------------------KHYDKALPHLEAALELA 212 (378)
T ss_dssp ---------------------------------------------------------------TCHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------CCHHHHHHHHHHHHHHH
Confidence 46888999999999999
Q ss_pred HHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHH
Q 011759 223 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (478)
Q Consensus 223 ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL 302 (478)
.+. +.....+.+|.+||.++..+|+|++|+.+|++|+.+.+.. .++..+.++++||.+|...|++++|+.+|++|+
T Consensus 213 ~~~-~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 288 (378)
T 3q15_A 213 MDI-QNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREK---VPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGL 288 (378)
T ss_dssp HHT-TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH---CGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHc-CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh---CChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 766 4445789999999999999999999999999999999887 455569999999999999999999999999999
Q ss_pred HHH
Q 011759 303 SVC 305 (478)
Q Consensus 303 ~I~ 305 (478)
.+.
T Consensus 289 ~~~ 291 (378)
T 3q15_A 289 DHI 291 (378)
T ss_dssp HHC
T ss_pred HHH
Confidence 984
No 20
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.54 E-value=2.1e-13 Score=133.92 Aligned_cols=152 Identities=18% Similarity=0.146 Sum_probs=101.2
Q ss_pred HHHHH-HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCC
Q 011759 64 EFADE-LMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQG 142 (478)
Q Consensus 64 ~~A~~-L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~ 142 (478)
..|.. +...|..+...|+|++|+++|.+|+++.... | .....+.+|.++|.++..+++
T Consensus 33 ~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~-~-~~~~~a~~~~~lg~~~~~~g~------------------- 91 (307)
T 2ifu_A 33 DSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANN-R-SLFHAAKAFEQAGMMLKDLQR------------------- 91 (307)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHHHTTC-------------------
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHHHHHhCCC-------------------
Confidence 33444 4445788999999999999999999997654 4 345778999999999987632
Q ss_pred CCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011759 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 222 (478)
Q Consensus 143 ~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ 222 (478)
++.|.+.|+.|+.|+
T Consensus 92 -----------------------------------------------------------------~~~A~~~~~~Al~l~ 106 (307)
T 2ifu_A 92 -----------------------------------------------------------------MPEAVQYIEKASVMY 106 (307)
T ss_dssp -----------------------------------------------------------------GGGGHHHHHHHHHHH
T ss_pred -----------------------------------------------------------------HHHHHHHHHHHHHHH
Confidence 333555566666665
Q ss_pred HHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHH
Q 011759 223 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (478)
Q Consensus 223 ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL 302 (478)
.+. +.....+.+|.+||.+|.. |+|++|+.+|++||.|.+..- +.+..+.+|++||.+|..+|+|++|+.+|++++
T Consensus 107 ~~~-g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~--~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 182 (307)
T 2ifu_A 107 VEN-GTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEE--RLRQAAELIGKASRLLVRQQKFDEAAASLQKEK 182 (307)
T ss_dssp HTT-TCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHc-CCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCC--ChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 543 2223456666666666666 666666666666666666531 233456666666666666666666666666666
Q ss_pred HHH
Q 011759 303 SVC 305 (478)
Q Consensus 303 ~I~ 305 (478)
.+.
T Consensus 183 ~~~ 185 (307)
T 2ifu_A 183 SMY 185 (307)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 21
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.53 E-value=4.3e-14 Score=150.76 Aligned_cols=107 Identities=11% Similarity=0.000 Sum_probs=102.2
Q ss_pred CcChHHHHHHHHHHHHHHHHHhcC-CCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 011759 204 DESDLDLAWKMLDVARAIAEKHWG-DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC 282 (478)
Q Consensus 204 d~ddle~AwE~Le~Ar~I~ek~l~-~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG 282 (478)
..++++.|..+++.++.|+++.++ .|+.++.++++||.+|..+|+|++|+.+|+++|+|+++++|++||.+|.+|+|||
T Consensus 321 ~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 400 (490)
T 3n71_A 321 SEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAG 400 (490)
T ss_dssp TTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 567899999999999999999988 5899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCchHHHHHHHHHHHHHHHHHH
Q 011759 283 LCLEIGSKPQEAIPYCQKAISVCKSRVQ 310 (478)
Q Consensus 283 ~ay~~~~~~eeAl~~~ekAL~I~k~rl~ 310 (478)
.+|..+|+|++|+.+|++||+|++..++
T Consensus 401 ~~~~~~G~~~eA~~~~~~Al~i~~~~lG 428 (490)
T 3n71_A 401 LTNWHAGHIEVGHGMICKAYAILLVTHG 428 (490)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999887654
No 22
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.52 E-value=1.5e-13 Score=127.46 Aligned_cols=141 Identities=21% Similarity=0.258 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHH----------------HHHHHHhhhhccCCcc
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQ----------------YGRALLYKAQEEADPL 129 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~----------------YG~ALl~~a~~esdvL 129 (478)
+..++.+|..++..|+|++|+.+|.+++++ +|..+.+|++ +|.+|+..
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~-------- 67 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIAL--------NIDRTEMYYWTNVDKNSEISSKLATELALAYKKN-------- 67 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHT--------
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHC--------
Confidence 678899999999999999999999999998 7999999999 88888764
Q ss_pred CCCCCCcCCCCCCCCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHH
Q 011759 130 VSVPKKEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLD 209 (478)
Q Consensus 130 g~~~~~~~e~~~~~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle 209 (478)
++++
T Consensus 68 ----------------------------------------------------------------------------g~~~ 71 (208)
T 3urz_A 68 ----------------------------------------------------------------------------RNYD 71 (208)
T ss_dssp ----------------------------------------------------------------------------TCHH
T ss_pred ----------------------------------------------------------------------------CCHH
Confidence 3566
Q ss_pred HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHH---------------
Q 011759 210 LAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHI--------------- 274 (478)
Q Consensus 210 ~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~i--------------- 274 (478)
.|...|+.++.+ .+..+.+|.+||.++...|+|++|+.+|+++|++.+.... -+..+
T Consensus 72 ~A~~~~~~al~~-------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~-a~~~lg~~~~~~~~~~~~~~ 143 (208)
T 3urz_A 72 KAYLFYKELLQK-------APNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLA-ANIFLGNYYYLTAEQEKKKL 143 (208)
T ss_dssp HHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH-HHHHHHHHHHHHhHHHHHHH
Confidence 677777776654 3456788999999999999999999999999887543210 00001
Q ss_pred -------------HHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH
Q 011759 275 -------------AELNFRICLCLEIGSKPQEAIPYCQKAISVCK 306 (478)
Q Consensus 275 -------------Aea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k 306 (478)
..++|++|+++...++|++|+.+|++||.+..
T Consensus 144 ~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P 188 (208)
T 3urz_A 144 ETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFP 188 (208)
T ss_dssp HHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 12355666677777788888888888887754
No 23
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.50 E-value=2.5e-13 Score=151.09 Aligned_cols=158 Identities=15% Similarity=0.139 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~ 145 (478)
+..+.++|..++.+|+|++|+.+|.+|+++ +|..+.+|+++|.+|+.+++.+.++--. +
T Consensus 43 ~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l--------~P~~~~a~~nLg~~l~~~g~~~~A~~~~--~----------- 101 (723)
T 4gyw_A 43 AAAHSNLASVLQQQGKLQEALMHYKEAIRI--------SPTFADAYSNMGNTLKEMQDVQGALQCY--T----------- 101 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHH--H-----------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHH--H-----------
Confidence 677899999999999999999999999998 7999999999999999987664331100 0
Q ss_pred ccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011759 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (478)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~ 225 (478)
..+ ..++....+- -..+......++++.|.+.|+.|+.+
T Consensus 102 -kAl--~l~P~~~~a~----------------------------------~~Lg~~~~~~g~~~eAi~~~~~Al~l---- 140 (723)
T 4gyw_A 102 -RAI--QINPAFADAH----------------------------------SNLASIHKDSGNIPEAIASYRTALKL---- 140 (723)
T ss_dssp -HHH--HHCTTCHHHH----------------------------------HHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred -HHH--HhCCCCHHHH----------------------------------HHHHHHHHHcCCHHHHHHHHHHHHHh----
Confidence 000 0000000000 00001112235666777766666654
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCC
Q 011759 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSK 290 (478)
Q Consensus 226 l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~ 290 (478)
.++.+.+|.+||.++..+++|++|+..|+++++|....+..+ .+...+...++.|.....
T Consensus 141 ---~P~~~~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~~~~~~~--~l~~~~~~~~l~~~~~~~ 200 (723)
T 4gyw_A 141 ---KPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKN--RLPSVHPHHSMLYPLSHG 200 (723)
T ss_dssp ---CSCCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHHHHTT--CCCSSCTTGGGGSCCCHH
T ss_pred ---CCCChHHHhhhhhHHHhcccHHHHHHHHHHHHHhChhHHhhc--cCcccchhhhhhhhcCHH
Confidence 466789999999999999999999999999999998765321 223344444444443333
No 24
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.50 E-value=8.5e-13 Score=131.39 Aligned_cols=194 Identities=16% Similarity=0.138 Sum_probs=143.9
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCC
Q 011759 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQG 142 (478)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~ 142 (478)
...+..|+.+|..++..|+|++|+.+|.+++++... .....+.+|+.+|.+++..++.+...--. .
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~----~~~~~~~~~~~lg~~~~~~g~~~~A~~~~--~-------- 110 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTE----DLRTLSAIYSQLGNAYFYLGDYNKAMQYH--K-------- 110 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS----CHHHHHHHHHHHHHHHHHHTCHHHHHHHH--H--------
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc----ChhHHHHHHHHHHHHHHHCCCHHHHHHHH--H--------
Confidence 567889999999999999999999999999998543 46788889999999999997654321100 0
Q ss_pred CCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011759 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 222 (478)
Q Consensus 143 ~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ 222 (478)
....-... . . +...... .- -..+...-..++++.|..+|+.++.++
T Consensus 111 ----~al~~~~~-------~-~--------~~~~~~~--~~------------~~l~~~~~~~g~~~~A~~~~~~al~~~ 156 (411)
T 4a1s_A 111 ----HDLTLAKS-------M-N--------DRLGEAK--SS------------GNLGNTLKVMGRFDEAAICCERHLTLA 156 (411)
T ss_dssp ----HHHHHHHH-------T-T--------CHHHHHH--HH------------HHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHH-------c-c--------CchHHHH--HH------------HHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 00000000 0 0 0000000 00 000001123478899999999999998
Q ss_pred HHhcCCCchHHHHHHHHHHHHHhcCC-----------------HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 223 EKHWGDSMEKVDILSALAEVALERED-----------------IETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 223 ek~l~~~~~~Ad~~~~LGev~le~g~-----------------feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
.+.. ..+..+.+|.+||.++...|+ |++|+.+|++++.+.+.+ .+++.++.+|++||.+|
T Consensus 157 ~~~~-~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~ 233 (411)
T 4a1s_A 157 RQLG-DRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDL--GDRGAQGRACGNLGNTY 233 (411)
T ss_dssp HHHT-CHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHH
T ss_pred HHhh-chHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHH
Confidence 8763 456789999999999999999 999999999999999887 35688999999999999
Q ss_pred HcCCCchHHHHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISVCKS 307 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I~k~ 307 (478)
...|+|++|+.+|++++.+...
T Consensus 234 ~~~g~~~~A~~~~~~al~~~~~ 255 (411)
T 4a1s_A 234 YLLGDFQAAIEHHQERLRIARE 255 (411)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHHHHHh
Confidence 9999999999999999998764
No 25
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.50 E-value=2.4e-13 Score=126.86 Aligned_cols=133 Identities=19% Similarity=0.138 Sum_probs=117.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~ 145 (478)
+..++.+|..++..|+|++|+.+|.+++++ .|..+.+|+++|.+++..
T Consensus 5 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~------------------------ 52 (217)
T 2pl2_A 5 EQNPLRLGVQLYALGRYDAALTLFERALKE--------NPQDPEALYWLARTQLKL------------------------ 52 (217)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------SSSCHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHc------------------------
Confidence 456889999999999999999999999987 799999999999999875
Q ss_pred ccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011759 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (478)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~ 225 (478)
++++.|...|+.++.+
T Consensus 53 ------------------------------------------------------------g~~~~A~~~~~~al~~---- 68 (217)
T 2pl2_A 53 ------------------------------------------------------------GLVNPALENGKTLVAR---- 68 (217)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHH----
T ss_pred ------------------------------------------------------------CCHHHHHHHHHHHHHh----
Confidence 3466777777777655
Q ss_pred cCCCchHHHHHHHHHHHHHhc-----------CCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHH
Q 011759 226 WGDSMEKVDILSALAEVALER-----------EDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEA 294 (478)
Q Consensus 226 l~~~~~~Ad~~~~LGev~le~-----------g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeA 294 (478)
.|..+.+|.+||.++... |+|++|+..|++++++... -+.+|++||.+|...|++++|
T Consensus 69 ---~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~--------~~~~~~~lg~~~~~~g~~~~A 137 (217)
T 2pl2_A 69 ---TPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPR--------YAPLHLQRGLVYALLGERDKA 137 (217)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTT--------CHHHHHHHHHHHHHTTCHHHH
T ss_pred ---CCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcc--------cHHHHHHHHHHHHHcCChHHH
Confidence 356788999999999999 9999999999999998432 358999999999999999999
Q ss_pred HHHHHHHHHHH
Q 011759 295 IPYCQKAISVC 305 (478)
Q Consensus 295 l~~~ekAL~I~ 305 (478)
+.+|++|+++.
T Consensus 138 ~~~~~~al~~~ 148 (217)
T 2pl2_A 138 EASLKQALALE 148 (217)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhcc
Confidence 99999999874
No 26
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.49 E-value=3.8e-13 Score=131.12 Aligned_cols=156 Identities=12% Similarity=0.045 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCC
Q 011759 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (478)
Q Consensus 65 ~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~ 144 (478)
.+..|.++|..+..+|+|++|+.+|.+|+++.... |. ....+.+|+++|.+|...
T Consensus 76 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~-g~-~~~~a~~~~~lg~~~~~~----------------------- 130 (292)
T 1qqe_A 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHR-GQ-FRRGANFKFELGEILEND----------------------- 130 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-TC-HHHHHHHHHHHHHHHHHT-----------------------
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc-CC-HHHHHHHHHHHHHHHHHh-----------------------
Confidence 47789999999999999999999999999997543 32 344578999999988752
Q ss_pred CccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011759 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (478)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek 224 (478)
.++++.|.++|+.|+.++..
T Consensus 131 ------------------------------------------------------------lg~~~~A~~~~~~Al~~~~~ 150 (292)
T 1qqe_A 131 ------------------------------------------------------------LHDYAKAIDCYELAGEWYAQ 150 (292)
T ss_dssp ------------------------------------------------------------TCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------------------------hcCHHHHHHHHHHHHHHHHh
Confidence 04577899999999999876
Q ss_pred hcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 225 ~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
.. .....+.+|.+||.+++.+|+|++|+.+|++++.+..... ..+..++.+|+++|.||..+|++++|+.+|++++.+
T Consensus 151 ~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 228 (292)
T 1qqe_A 151 DQ-SVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNR-LSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSE 228 (292)
T ss_dssp TT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCT-TTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC
T ss_pred CC-ChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCC-cccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 43 2334578999999999999999999999999998764331 112356789999999999999999999999999987
Q ss_pred HHH
Q 011759 305 CKS 307 (478)
Q Consensus 305 ~k~ 307 (478)
...
T Consensus 229 ~p~ 231 (292)
T 1qqe_A 229 DPN 231 (292)
T ss_dssp ---
T ss_pred CCC
Confidence 554
No 27
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.49 E-value=9.2e-13 Score=131.14 Aligned_cols=99 Identities=11% Similarity=0.129 Sum_probs=88.7
Q ss_pred cChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 011759 205 ESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLC 284 (478)
Q Consensus 205 ~ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~a 284 (478)
.++++.|.++|+.++.++.+. +..+..+.+|..||.++...|+|++|+.+|++++.+.+... +++..+.+|++||.+
T Consensus 99 ~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~ 175 (411)
T 4a1s_A 99 LGDYNKAMQYHKHDLTLAKSM-NDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLG--DRLSEGRALYNLGNV 175 (411)
T ss_dssp HTCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHc-cCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHH
Confidence 367899999999999998776 34577899999999999999999999999999999998873 678899999999999
Q ss_pred HHcCCC-----------------chHHHHHHHHHHHHHH
Q 011759 285 LEIGSK-----------------PQEAIPYCQKAISVCK 306 (478)
Q Consensus 285 y~~~~~-----------------~eeAl~~~ekAL~I~k 306 (478)
|...|+ |++|+.+|++++.+.+
T Consensus 176 ~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~ 214 (411)
T 4a1s_A 176 YHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMR 214 (411)
T ss_dssp HHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 999999 9999999999988753
No 28
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.47 E-value=1.3e-12 Score=120.79 Aligned_cols=141 Identities=13% Similarity=0.119 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCCh-hHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCC
Q 011759 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELAL-ECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (478)
Q Consensus 67 ~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~p-e~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~ 145 (478)
..++.+|..++..|+|++|+.+|.+++++ .| ....+|+++|.+++.+
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~~~~~~~~~~------------------------ 55 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKL--------TNNQDSVTAYNCGVCADNI------------------------ 55 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------TTTCCHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhc--------cCCCCcHHHHHHHHHHHHh------------------------
Confidence 68899999999999999999999999998 34 5567889999999875
Q ss_pred ccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011759 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (478)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~ 225 (478)
++++.|...|+.|+.+
T Consensus 56 ------------------------------------------------------------~~~~~A~~~~~~al~~---- 71 (228)
T 4i17_A 56 ------------------------------------------------------------KKYKEAADYFDIAIKK---- 71 (228)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHT----
T ss_pred ------------------------------------------------------------hcHHHHHHHHHHHHHh----
Confidence 3566777777777632
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Q 011759 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 226 l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~ 305 (478)
.+....+|..||.++..+|+|++|+..|++++.+..... .-...++.+|+++|.+|...|++++|+.+|+++|++.
T Consensus 72 ---~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 147 (228)
T 4i17_A 72 ---NYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNA-TIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVT 147 (228)
T ss_dssp ---TCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH-HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSS
T ss_pred ---CcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH-HHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcC
Confidence 456889999999999999999999999999998754211 0123567899999999999999999999999999875
Q ss_pred HH
Q 011759 306 KS 307 (478)
Q Consensus 306 k~ 307 (478)
..
T Consensus 148 p~ 149 (228)
T 4i17_A 148 SK 149 (228)
T ss_dssp CH
T ss_pred CC
Confidence 44
No 29
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.47 E-value=1.7e-12 Score=127.51 Aligned_cols=99 Identities=12% Similarity=0.119 Sum_probs=88.6
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCC--------------------HHHHHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALERED--------------------IETSLSDYQKALTILER 265 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~--------------------feeAl~dy~kAL~I~~~ 265 (478)
++++.|..+++.++.++.+.. .....+.+|..||.++...|+ |++|+.+|++++.+.+.
T Consensus 101 g~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~ 179 (406)
T 3sf4_A 101 GNFDEAIVCCQRHLDISRELN-DKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTA 179 (406)
T ss_dssp TCHHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcc-cccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 578889999999999988764 345678999999999999999 99999999999999988
Q ss_pred hcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHH
Q 011759 266 MVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKS 307 (478)
Q Consensus 266 llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k~ 307 (478)
. .+++.++.+|++||.+|...|++++|+.+|++++.+.+.
T Consensus 180 ~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 219 (406)
T 3sf4_A 180 L--GDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKE 219 (406)
T ss_dssp T--TCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHH
T ss_pred c--cCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh
Confidence 7 367889999999999999999999999999999988654
No 30
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.46 E-value=1.2e-12 Score=128.46 Aligned_cols=150 Identities=13% Similarity=0.107 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCC
Q 011759 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (478)
Q Consensus 65 ~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~ 144 (478)
.+..|.++|..+..+|+|++|+.+|.+|+++... .|. ....+.+|+++|.++..
T Consensus 75 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~-~g~-~~~~a~~~~~lg~~~~~------------------------ 128 (307)
T 2ifu_A 75 AAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVE-NGT-PDTAAMALDRAGKLMEP------------------------ 128 (307)
T ss_dssp HHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHT-TTC-HHHHHHHHHHHHHHHTT------------------------
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH-cCC-HHHHHHHHHHHHHHHHc------------------------
Confidence 4678889999999999999999999999999753 332 23567888888888731
Q ss_pred CccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011759 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (478)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek 224 (478)
++++.|+++|+.|+.++..
T Consensus 129 -------------------------------------------------------------g~~~~A~~~~~~Al~~~~~ 147 (307)
T 2ifu_A 129 -------------------------------------------------------------LDLSKAVHLYQQAAAVFEN 147 (307)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------------------------CCHHHHHHHHHHHHHHHHh
Confidence 3578899999999999987
Q ss_pred hcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 225 ~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
. +.....+.+|.+||.++..+|+|++|+.+|+++|.+.+... .++.++.+++++|.+|..+|++++|+.+|++++ +
T Consensus 148 ~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~ 223 (307)
T 2ifu_A 148 E-ERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEME--NYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-S 223 (307)
T ss_dssp T-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-T
T ss_pred C-CChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC--ChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-C
Confidence 4 33445689999999999999999999999999999998864 255678899999999999999999999999998 5
Q ss_pred H
Q 011759 305 C 305 (478)
Q Consensus 305 ~ 305 (478)
.
T Consensus 224 ~ 224 (307)
T 2ifu_A 224 I 224 (307)
T ss_dssp S
T ss_pred C
Confidence 3
No 31
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.46 E-value=4.3e-12 Score=124.65 Aligned_cols=100 Identities=11% Similarity=0.109 Sum_probs=88.2
Q ss_pred cChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 011759 205 ESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLC 284 (478)
Q Consensus 205 ~ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~a 284 (478)
...++.|.++++.++.++.+. +..+..+.+|.+||.++...|+|++|+.+|++++.+.+.. .+++.++.+|++||.+
T Consensus 160 ~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~ 236 (406)
T 3sf4_A 160 RDALQAAVDFYEENLSLVTAL-GDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF--GDKAAERRAYSNLGNA 236 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc-cCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhc--CCcHHHHHHHHHHHHH
Confidence 356888999999998888776 3456789999999999999999999999999999999885 3567789999999999
Q ss_pred HHcCCCchHHHHHHHHHHHHHHH
Q 011759 285 LEIGSKPQEAIPYCQKAISVCKS 307 (478)
Q Consensus 285 y~~~~~~eeAl~~~ekAL~I~k~ 307 (478)
|...|++++|+.+|++++.+...
T Consensus 237 ~~~~g~~~~A~~~~~~al~~~~~ 259 (406)
T 3sf4_A 237 YIFLGEFETASEYYKKTLLLARQ 259 (406)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCChHHHHHHHHHHHHHHHh
Confidence 99999999999999999988764
No 32
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.45 E-value=1.6e-13 Score=143.94 Aligned_cols=106 Identities=6% Similarity=-0.022 Sum_probs=98.2
Q ss_pred cChHHHHHHHHHHHHHHHHHhcC-CCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 011759 205 ESDLDLAWKMLDVARAIAEKHWG-DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICL 283 (478)
Q Consensus 205 ~ddle~AwE~Le~Ar~I~ek~l~-~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ 283 (478)
.+.++.|.++++.++.|+++.++ .|+.++.++++||.+|..+|+|++|+.+|+++|.|+++++|++||.+|.+|+|||.
T Consensus 300 ~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~ 379 (429)
T 3qwp_A 300 HWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGK 379 (429)
T ss_dssp TTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHH
Confidence 35677888888888888888777 58999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCchHHHHHHHHHHHHHHHHHH
Q 011759 284 CLEIGSKPQEAIPYCQKAISVCKSRVQ 310 (478)
Q Consensus 284 ay~~~~~~eeAl~~~ekAL~I~k~rl~ 310 (478)
+|..+|+|++|+.+|++|++|++..++
T Consensus 380 ~~~~~g~~~eA~~~~~~Al~i~~~~lG 406 (429)
T 3qwp_A 380 LQLHQGMFPQAMKNLRLAFDIMRVTHG 406 (429)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999887654
No 33
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.45 E-value=1.9e-12 Score=120.80 Aligned_cols=143 Identities=14% Similarity=0.081 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~ 145 (478)
+..++.+|..++..|+|++|+.+|.+++++ .|..+.+|+++|.+++........
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~lg~~~~~~~~~~~~------------------ 92 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLVAR--------TPRYLGGYMVLSEAYVALYRQAED------------------ 92 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHTCSS------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHhhhhhhh------------------
Confidence 567889999999999999999999999998 799999999999999987321000
Q ss_pred ccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011759 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (478)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~ 225 (478)
. .-..++++.|...|+.|+.+
T Consensus 93 --------------------~-----------------------------------~~~~g~~~~A~~~~~~al~~---- 113 (217)
T 2pl2_A 93 --------------------R-----------------------------------ERGKGYLEQALSVLKDAERV---- 113 (217)
T ss_dssp --------------------H-----------------------------------HHHHHHHHHHHHHHHHHHHH----
T ss_pred --------------------h-----------------------------------cccccCHHHHHHHHHHHHHh----
Confidence 0 00115677777777777655
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Q 011759 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 226 l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~ 305 (478)
.+..+.+|.+||.++...|+|++|+..|++++++. .. +.+|++||.+|...|++++|+.+|++++.+.
T Consensus 114 ---~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~--------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 181 (217)
T 2pl2_A 114 ---NPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DT--------PEIRSALAELYLSMGRLDEALAQYAKALEQA 181 (217)
T ss_dssp ---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CC--------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred ---CcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cc--------hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 45678899999999999999999999999999987 22 5889999999999999999999999999864
No 34
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.45 E-value=6.4e-12 Score=115.55 Aligned_cols=149 Identities=18% Similarity=0.117 Sum_probs=126.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCC
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~ 143 (478)
..+..+..+|..++..|+|++|+.+|.+++++. ....+|+.+|.+++.+
T Consensus 3 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~---------~~~~~~~~~~~~~~~~---------------------- 51 (258)
T 3uq3_A 3 SMADKEKAEGNKFYKARQFDEAIEHYNKAWELH---------KDITYLNNRAAAEYEK---------------------- 51 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS---------CCTHHHHHHHHHHHHT----------------------
T ss_pred hHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh---------ccHHHHHHHHHHHHHc----------------------
Confidence 458899999999999999999999999999983 3457999999999875
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
++++.|.+.|+.++.+..
T Consensus 52 --------------------------------------------------------------~~~~~A~~~~~~a~~~~~ 69 (258)
T 3uq3_A 52 --------------------------------------------------------------GEYETAISTLNDAVEQGR 69 (258)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------ccHHHHHHHHHHHHHhCc
Confidence 457788999999998887
Q ss_pred HhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-------------------HHhcCCCChHHHHHHHHHHHH
Q 011759 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTIL-------------------ERMVEPDSRHIAELNFRICLC 284 (478)
Q Consensus 224 k~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~-------------------~~llg~d~r~iAea~~~LG~a 284 (478)
.........+.+|..||.++...|+|++|+.+|++++.+. ++.+ ..++..+.+|+++|.+
T Consensus 70 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~ 148 (258)
T 3uq3_A 70 EMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEA-YVNPEKAEEARLEGKE 148 (258)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHH-HcCcchHHHHHHHHHH
Confidence 6644445568999999999999999999999999999952 1111 1467788999999999
Q ss_pred HHcCCCchHHHHHHHHHHHHHH
Q 011759 285 LEIGSKPQEAIPYCQKAISVCK 306 (478)
Q Consensus 285 y~~~~~~eeAl~~~ekAL~I~k 306 (478)
|...|++++|+.+|++++.+..
T Consensus 149 ~~~~~~~~~A~~~~~~a~~~~~ 170 (258)
T 3uq3_A 149 YFTKSDWPNAVKAYTEMIKRAP 170 (258)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHhcCHHHHHHHHHHHHhcCc
Confidence 9999999999999999998654
No 35
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.45 E-value=3.8e-12 Score=120.22 Aligned_cols=150 Identities=19% Similarity=0.197 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~ 145 (478)
+..|+..|..++..|+|++|+.+|.+++++ .....+..+.+|+.+|.+++..
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~----~~~~~~~~~~~~~~l~~~~~~~------------------------ 56 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQV----GTEDLKTLSAIYSQLGNAYFYL------------------------ 56 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----CCSCHHHHHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhh----CcccHHHHHHHHHHHHHHHHHc------------------------
Confidence 567889999999999999999999999997 2222334578999999999865
Q ss_pred ccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011759 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (478)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~ 225 (478)
++++.|.++++.++.++.+.
T Consensus 57 ------------------------------------------------------------g~~~~A~~~~~~al~~~~~~ 76 (338)
T 3ro2_A 57 ------------------------------------------------------------HDYAKALEYHHHDLTLARTI 76 (338)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------------------------CCHHHHHHHHHHHHHHhhcc
Confidence 45778889999999888776
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCC---------------
Q 011759 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSK--------------- 290 (478)
Q Consensus 226 l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~--------------- 290 (478)
+..+..+.+|..||.++...|+|++|+..|++++.+.+... +++.++.++++||.+|...++
T Consensus 77 -~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 153 (338)
T 3ro2_A 77 -GDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN--DKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPE 153 (338)
T ss_dssp -TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCH
T ss_pred -cccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhc--CchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhh
Confidence 34567899999999999999999999999999999999863 567789999999999999999
Q ss_pred -----chHHHHHHHHHHHHHH
Q 011759 291 -----PQEAIPYCQKAISVCK 306 (478)
Q Consensus 291 -----~eeAl~~~ekAL~I~k 306 (478)
+++|+.+|++++.+.+
T Consensus 154 ~a~~~~~~A~~~~~~a~~~~~ 174 (338)
T 3ro2_A 154 DVRNALQAAVDLYEENLSLVT 174 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888888754
No 36
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.44 E-value=5e-13 Score=123.56 Aligned_cols=125 Identities=14% Similarity=0.048 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCCc
Q 011759 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKD 146 (478)
Q Consensus 67 ~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~d 146 (478)
..+..+|..++..|+|++|+.+|.+|+++ +|....+|+.+|.+++.+
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~------------------------- 89 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKK--------NYNLANAYIGKSAAYRDM------------------------- 89 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHT--------TCSHHHHHHHHHHHHHHT-------------------------
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHh--------CcchHHHHHHHHHHHHHc-------------------------
Confidence 45677999999999999999999999986 789999999999999875
Q ss_pred cccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHhc
Q 011759 147 DSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHW 226 (478)
Q Consensus 147 e~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~l 226 (478)
++++.|.+.|+.++.++-...
T Consensus 90 -----------------------------------------------------------~~~~~A~~~~~~al~~~p~~~ 110 (228)
T 4i17_A 90 -----------------------------------------------------------KNNQEYIATLTEGIKAVPGNA 110 (228)
T ss_dssp -----------------------------------------------------------TCHHHHHHHHHHHHHHSTTCH
T ss_pred -----------------------------------------------------------ccHHHHHHHHHHHHHHCCCcH
Confidence 456778888888877653322
Q ss_pred CCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChH--HHHHHHHHHHHHHcCCCc
Q 011759 227 GDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRH--IAELNFRICLCLEIGSKP 291 (478)
Q Consensus 227 ~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~--iAea~~~LG~ay~~~~~~ 291 (478)
.....++.+|..+|.++...|+|++|+.+|+++|++ +|. .+.+|++||.+|...++.
T Consensus 111 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 111 TIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDV--------TSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS--------SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhc--------CCCcccHHHHHHHHHHHHHHHHH
Confidence 112346789999999999999999999999999987 344 578999999999888877
No 37
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.44 E-value=6e-12 Score=118.88 Aligned_cols=155 Identities=14% Similarity=0.120 Sum_probs=136.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCC
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~ 143 (478)
..+..+..+|..++..|+|++|+.+|.+++++.... ...+..+.+|+.+|.+++..
T Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~---------------------- 96 (338)
T 3ro2_A 41 TLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI--GDQLGEAKASGNLGNTLKVL---------------------- 96 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcc--cccHHHHHHHHHHHHHHHHc----------------------
Confidence 346788899999999999999999999999997665 34678899999999999865
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
++++.|.+.++.++.++.
T Consensus 97 --------------------------------------------------------------g~~~~A~~~~~~al~~~~ 114 (338)
T 3ro2_A 97 --------------------------------------------------------------GNFDEAIVCCQRHLDISR 114 (338)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------cCHHHHHHHHHHHHHHHH
Confidence 457788999999999888
Q ss_pred HhcCCCchHHHHHHHHHHHHHhcCC--------------------HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 011759 224 KHWGDSMEKVDILSALAEVALERED--------------------IETSLSDYQKALTILERMVEPDSRHIAELNFRICL 283 (478)
Q Consensus 224 k~l~~~~~~Ad~~~~LGev~le~g~--------------------feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ 283 (478)
+.. .....+.+|..||.++...|+ |++|+..|++++.+.+... +.+..+.++++||.
T Consensus 115 ~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~l~~ 191 (338)
T 3ro2_A 115 ELN-DKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALG--DRAAQGRAFGNLGN 191 (338)
T ss_dssp HTT-CHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHH
T ss_pred Hhc-CchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHH
Confidence 753 345678999999999999999 9999999999999998873 56788999999999
Q ss_pred HHHcCCCchHHHHHHHHHHHHHHH
Q 011759 284 CLEIGSKPQEAIPYCQKAISVCKS 307 (478)
Q Consensus 284 ay~~~~~~eeAl~~~ekAL~I~k~ 307 (478)
+|...|++++|+.+|++++.+.+.
T Consensus 192 ~~~~~~~~~~A~~~~~~a~~~~~~ 215 (338)
T 3ro2_A 192 THYLLGNFRDAVIAHEQRLLIAKE 215 (338)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998654
No 38
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.44 E-value=1.2e-13 Score=122.39 Aligned_cols=129 Identities=11% Similarity=0.094 Sum_probs=108.2
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCCccccc
Q 011759 71 EKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVK 150 (478)
Q Consensus 71 ~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~de~~~ 150 (478)
.+|..+...|++++|+..|.+++.. .|+....+|.+|++++..
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~--------~p~~~~~~~~la~~y~~~----------------------------- 44 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPS--------PRQKSIKGFYFAKLYYEA----------------------------- 44 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCS--------HHHHHTTHHHHHHHHHHT-----------------------------
T ss_pred HhHHHHHHcChHHHHHHHHHHhccc--------CcccHHHHHHHHHHHHHc-----------------------------
Confidence 3788889999999999999999986 699999999999999875
Q ss_pred cccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCCCc
Q 011759 151 NAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSM 230 (478)
Q Consensus 151 ~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~l~~~~ 230 (478)
++++.|.+.|+.|+.+ .+
T Consensus 45 -------------------------------------------------------~~~~~A~~~~~~al~~-------~p 62 (150)
T 4ga2_A 45 -------------------------------------------------------KEYDLAKKYICTYINV-------QE 62 (150)
T ss_dssp -------------------------------------------------------TCHHHHHHHHHHHHHH-------CT
T ss_pred -------------------------------------------------------CCHHHHHHHHHHHHHh-------CC
Confidence 4577888888888765 35
Q ss_pred hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHH-HHHHHHHH
Q 011759 231 EKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYC-QKAISVCK 306 (478)
Q Consensus 231 ~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~-ekAL~I~k 306 (478)
..+.+|.+||.++...|+|++|+.+|+++|++.... +.+|++||.+|...+++++|+.+| ++|+++..
T Consensus 63 ~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~--------~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P 131 (150)
T 4ga2_A 63 RDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQ--------KDLVLKIAELLCKNDVTDGRAKYWVERAAKLFP 131 (150)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--------HHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHST
T ss_pred CCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCc
Confidence 668999999999999999999999999999985432 589999999999999999988765 89998743
No 39
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.43 E-value=2.7e-12 Score=110.58 Aligned_cols=109 Identities=13% Similarity=0.200 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCC
Q 011759 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQG 142 (478)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~ 142 (478)
.+.|..+.++|..++.+|+|++|+.+|.+|+++ +|..+.+|+++|.+|+.+
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~--------~p~~~~~~~nlg~~~~~~--------------------- 55 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIEL--------DPSNITFYNNKAAVYFEE--------------------- 55 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT---------------------
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHhHHHHHHHh---------------------
Confidence 356888899999999999999999999999998 799999999999999976
Q ss_pred CCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011759 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 222 (478)
Q Consensus 143 ~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ 222 (478)
++++.|.+.++.|+.+.
T Consensus 56 ---------------------------------------------------------------~~~~~A~~~~~~al~~~ 72 (127)
T 4gcn_A 56 ---------------------------------------------------------------KKFAECVQFCEKAVEVG 72 (127)
T ss_dssp ---------------------------------------------------------------TCHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------hhHHHHHHHHHHHHHhC
Confidence 46788999999999998
Q ss_pred HHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 011759 223 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTIL 263 (478)
Q Consensus 223 ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~ 263 (478)
.........++.+|.+||.++..+++|++|+.+|+++|.+.
T Consensus 73 ~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~ 113 (127)
T 4gcn_A 73 RETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEF 113 (127)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred cccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 87766667789999999999999999999999999999754
No 40
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.43 E-value=1.8e-12 Score=111.89 Aligned_cols=115 Identities=19% Similarity=0.207 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCC
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~ 143 (478)
+.|..+.++|..++..|+|++|+.+|.+|+++ .|..+.+|+++|.+|+.+
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~---------------------- 60 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKR--------DPENAILYSNRAACLTKL---------------------- 60 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHhhHHHhh----------------------
Confidence 34888999999999999999999999999998 799999999999999976
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
++++.|.+.|+.|+.+
T Consensus 61 --------------------------------------------------------------~~~~~A~~~~~~al~~-- 76 (126)
T 4gco_A 61 --------------------------------------------------------------MEFQRALDDCDTCIRL-- 76 (126)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHH--
T ss_pred --------------------------------------------------------------ccHHHHHHHHHHHHHh--
Confidence 3566778888877765
Q ss_pred HhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 224 k~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
.+..+.+|.+||.++..+|+|++|+.+|+++|+|.+ ++ .+++.+|+.|+
T Consensus 77 -----~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P-----~~---~~a~~~l~~~l 125 (126)
T 4gco_A 77 -----DSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDP-----SN---EEAREGVRNCL 125 (126)
T ss_dssp -----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC---HHHHHHHHHHC
T ss_pred -----hhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCc-----CC---HHHHHHHHHhc
Confidence 345688999999999999999999999999999853 33 47888888775
No 41
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.42 E-value=3e-12 Score=110.30 Aligned_cols=91 Identities=16% Similarity=0.175 Sum_probs=81.2
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++|+.|.+.|+.|+.+ .+..+.+|.+||.+++.+|+|++|+.+|++||.|.+... ..++.++.+|++||.+|
T Consensus 22 ~~~~~A~~~y~~Al~~-------~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~-~~~~~~a~~~~~lg~~~ 93 (127)
T 4gcn_A 22 KDFEKAHVHYDKAIEL-------DPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETR-ADYKLIAKAMSRAGNAF 93 (127)
T ss_dssp TCHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh-------CCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccc-hhhHHHHHHHHHHHHHH
Confidence 4688888888888876 345688999999999999999999999999999998754 46788999999999999
Q ss_pred HcCCCchHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I 304 (478)
..+++|++|+.+|++||.+
T Consensus 94 ~~~~~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 94 QKQNDLSLAVQWFHRSLSE 112 (127)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHhh
Confidence 9999999999999999875
No 42
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.41 E-value=1.2e-12 Score=119.02 Aligned_cols=142 Identities=15% Similarity=0.073 Sum_probs=118.1
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCC
Q 011759 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQ 141 (478)
Q Consensus 62 ~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~ 141 (478)
++..+..++.+|..++..|+|++|+.+|.+++. | .+.+|+++|.+++..
T Consensus 2 s~~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~----------~-~~~~~~~lg~~~~~~-------------------- 50 (213)
T 1hh8_A 2 SLVEAISLWNEGVLAADKKDWKGALDAFSAVQD----------P-HSRICFNIGCMYTIL-------------------- 50 (213)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHTSSS----------C-CHHHHHHHHHHHHHT--------------------
T ss_pred ChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcC----------C-ChHHHHHHHHHHHHc--------------------
Confidence 456788899999999999999999999999841 1 467999999999865
Q ss_pred CCCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHH
Q 011759 142 GSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAI 221 (478)
Q Consensus 142 ~~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I 221 (478)
++++.|.+.|+.|+.+
T Consensus 51 ----------------------------------------------------------------g~~~~A~~~~~~al~~ 66 (213)
T 1hh8_A 51 ----------------------------------------------------------------KNMTEAEKAFTRSINR 66 (213)
T ss_dssp ----------------------------------------------------------------TCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------------------CCHHHHHHHHHHHHHh
Confidence 4577788888888765
Q ss_pred HHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhc--------CCCChHHHHHHHHHHHHHHcCCCchH
Q 011759 222 AEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMV--------EPDSRHIAELNFRICLCLEIGSKPQE 293 (478)
Q Consensus 222 ~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~ll--------g~d~r~iAea~~~LG~ay~~~~~~ee 293 (478)
. +..+.+|.+||.++...|+|++|+.+|++++.+..... -..++..+.+|++||.+|...|++++
T Consensus 67 ~-------~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 139 (213)
T 1hh8_A 67 D-------KHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKK 139 (213)
T ss_dssp C-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHH
T ss_pred C-------ccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHH
Confidence 2 35678999999999999999999999999998754321 01235567999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 011759 294 AIPYCQKAISVC 305 (478)
Q Consensus 294 Al~~~ekAL~I~ 305 (478)
|+.+|++++.+.
T Consensus 140 A~~~~~~al~~~ 151 (213)
T 1hh8_A 140 AEEQLALATSMK 151 (213)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHHcC
Confidence 999999999764
No 43
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.39 E-value=4.2e-12 Score=123.17 Aligned_cols=99 Identities=17% Similarity=0.198 Sum_probs=82.9
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChH-HHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRH-IAELNFRICLC 284 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~-iAea~~~LG~a 284 (478)
++++.|.+.|+.|+.++.+.. +....+.+|++||.+|...|+|++|+.+|++||.+.+... +.+. .+.+|++||.+
T Consensus 129 ~~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~--~~~~~~~~~~~nlg~~ 205 (293)
T 2qfc_A 129 VDYEYCILELKKLLNQQLTGI-DVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALH--DNEEFDVKVRYNHAKA 205 (293)
T ss_dssp SCHHHHHHHHHHHHTTCCCSS-CTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC--CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcC--ccccchHHHHHhHHHH
Confidence 578888888888877655432 3345789999999999999999999999999999988754 3343 34899999999
Q ss_pred HHcCCCchHHHHHHHHHHHHHHH
Q 011759 285 LEIGSKPQEAIPYCQKAISVCKS 307 (478)
Q Consensus 285 y~~~~~~eeAl~~~ekAL~I~k~ 307 (478)
|..+|+|++|+.+|++|+.+.+.
T Consensus 206 y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 206 LYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998753
No 44
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.39 E-value=1e-11 Score=107.31 Aligned_cols=142 Identities=18% Similarity=0.202 Sum_probs=115.9
Q ss_pred hhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCC
Q 011759 60 EKTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDS 139 (478)
Q Consensus 60 ~~~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~ 139 (478)
......+..++.+|..++..|+|++|+.+|.+++++ +|....+|+.+|.+++..
T Consensus 7 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~~a~~~~~~------------------ 60 (166)
T 1a17_A 7 DGALKRAEELKTQANDYFKAKDYENAIKFYSQAIEL--------NPSNAIYYGNRSLAYLRT------------------ 60 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHT------------------
T ss_pred hhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHc------------------
Confidence 345678999999999999999999999999999997 688899999999999865
Q ss_pred CCCCCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHH
Q 011759 140 QQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVAR 219 (478)
Q Consensus 140 ~~~~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar 219 (478)
++++.|.++|+.++
T Consensus 61 ------------------------------------------------------------------~~~~~A~~~~~~a~ 74 (166)
T 1a17_A 61 ------------------------------------------------------------------ECYGYALGDATRAI 74 (166)
T ss_dssp ------------------------------------------------------------------TCHHHHHHHHHHHH
T ss_pred ------------------------------------------------------------------CCHHHHHHHHHHHH
Confidence 35777888888877
Q ss_pred HHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHH
Q 011759 220 AIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQ 299 (478)
Q Consensus 220 ~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~e 299 (478)
.+. +....+|..+|.++...|+|++|+.+|++++.+.. .+.. +..++.++..+...+++++|+.+|+
T Consensus 75 ~~~-------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p-----~~~~-~~~~~~~~~~~~~~~~~~~A~~~~~ 141 (166)
T 1a17_A 75 ELD-------KKYIKGYYRRAASNMALGKFRAALRDYETVVKVKP-----HDKD-AKMKYQECNKIVKQKAFERAIAGDE 141 (166)
T ss_dssp HHC-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-----TCHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhC-------cccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-----CCHH-HHHHHHHHHHHHHHHHHHHHHHccc
Confidence 652 34578999999999999999999999999998743 2322 3344556666888889999999998
Q ss_pred HHHHHHH
Q 011759 300 KAISVCK 306 (478)
Q Consensus 300 kAL~I~k 306 (478)
++..++.
T Consensus 142 ~~~~~~~ 148 (166)
T 1a17_A 142 HKRSVVD 148 (166)
T ss_dssp HHHHHHH
T ss_pred chHHHhc
Confidence 8777653
No 45
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.39 E-value=1.5e-11 Score=119.16 Aligned_cols=153 Identities=17% Similarity=0.160 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhH---HHHHHHHHHHHHhhhhccCCccCCCCCCcCCCC
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALEC---VNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQ 140 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~---A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~ 140 (478)
.....+..+...++..|+|++|..+|.++++.. ...++. +..|+.+|..++..
T Consensus 73 ~~~~~l~~~i~~~~~~~~y~~a~~~~~~~l~~~-----~~~~~~~~~~~~~~~l~~~~~~~------------------- 128 (293)
T 3u3w_A 73 ERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKE-----EYHPEFQQFLQWQYYVAAYVLKK------------------- 128 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHTTS-------------------
T ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHHhccc-----cCChHHHHHHHHHHHHHHHHHcc-------------------
Confidence 456677778899999999999999999998841 233443 22333344433211
Q ss_pred CCCCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHH
Q 011759 141 QGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARA 220 (478)
Q Consensus 141 ~~~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~ 220 (478)
++++.|+++|+.|+.
T Consensus 129 -----------------------------------------------------------------~~~~~Ai~~~~~al~ 143 (293)
T 3u3w_A 129 -----------------------------------------------------------------VDYEYCILELKKLLN 143 (293)
T ss_dssp -----------------------------------------------------------------SCHHHHHHHHHHHHH
T ss_pred -----------------------------------------------------------------cCHHHHHHHHHHHHH
Confidence 468889999999988
Q ss_pred HHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHH
Q 011759 221 IAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQK 300 (478)
Q Consensus 221 I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ek 300 (478)
+..+. .+....+.+|++||.+|..+|+|++|+.+|++||.+.+.+ +.+++.++.+|++||.+|..+++|++|+.+|++
T Consensus 144 ~~~~~-~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~ 221 (293)
T 3u3w_A 144 QQLTG-IDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEAL-HDNEEFDVKVRYNHAKALYLDSRYEESLYQVNK 221 (293)
T ss_dssp TCCCC-SCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred Hhccc-ccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-ccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 65432 2334578899999999999999999999999999998876 347888999999999999999999999999999
Q ss_pred HHHHHHH
Q 011759 301 AISVCKS 307 (478)
Q Consensus 301 AL~I~k~ 307 (478)
||.+.+.
T Consensus 222 al~~~~~ 228 (293)
T 3u3w_A 222 AIEISCR 228 (293)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998654
No 46
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.39 E-value=1.9e-12 Score=133.38 Aligned_cols=53 Identities=11% Similarity=-0.038 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhh
Q 011759 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQ 123 (478)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~ 123 (478)
-..+..+..+|..+...|+|++|+.+|.+|+++ +|.++.+|+++|.+|+.+++
T Consensus 94 p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l--------~P~~~~a~~~~g~~l~~~g~ 146 (382)
T 2h6f_A 94 DKFRDVYDYFRAVLQRDERSERAFKLTRDAIEL--------NAANYTVWHFRRVLLKSLQK 146 (382)
T ss_dssp HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTC
T ss_pred hhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHh--------CccCHHHHHHHHHHHHHccc
Confidence 346788999999999999999999999999998 89999999999999998754
No 47
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.39 E-value=8.4e-12 Score=126.75 Aligned_cols=147 Identities=16% Similarity=0.120 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCC-CChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGE-LALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge-~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~ 144 (478)
+..+..+|.+++.+|+|++|+++|.+|++|....++. .+|..+.+|+++|.+++.+
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~----------------------- 107 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHM----------------------- 107 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHT-----------------------
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHc-----------------------
Confidence 5667889999999999999999999999999888874 6899999999999999976
Q ss_pred CccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011759 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (478)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek 224 (478)
++++.|..+|+.++.|+.+
T Consensus 108 -------------------------------------------------------------g~~~~A~~~~~ka~~i~~~ 126 (472)
T 4g1t_A 108 -------------------------------------------------------------GRLSDVQIYVDKVKHVCEK 126 (472)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------------------------CChHHHHHHHHHHHHHhHh
Confidence 3566777888888888877
Q ss_pred hcC-CCchHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH---HcCCCchHHHHHH
Q 011759 225 HWG-DSMEKVDILSALAEVALER--EDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL---EIGSKPQEAIPYC 298 (478)
Q Consensus 225 ~l~-~~~~~Ad~~~~LGev~le~--g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay---~~~~~~eeAl~~~ 298 (478)
..+ .++..+.+|.++|.+++.. ++|++|+.+|++||.+.+ ++ +++|+++|.++ ...+++++|+.+|
T Consensus 127 ~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p-----~~---~~~~~~~~~~~~~l~~~~~~~~al~~~ 198 (472)
T 4g1t_A 127 FSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKP-----KN---PEFTSGLAIASYRLDNWPPSQNAIDPL 198 (472)
T ss_dssp SCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHST-----TC---HHHHHHHHHHHHHHHHSCCCCCTHHHH
T ss_pred cccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCC-----CC---HHHHHHHHHHHHHhcCchHHHHHHHHH
Confidence 655 3456778888887766654 468888888888887743 33 35566666553 4456677788888
Q ss_pred HHHHHH
Q 011759 299 QKAISV 304 (478)
Q Consensus 299 ekAL~I 304 (478)
++||.+
T Consensus 199 ~~al~l 204 (472)
T 4g1t_A 199 RQAIRL 204 (472)
T ss_dssp HHHHHH
T ss_pred HHHhhc
Confidence 887765
No 48
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.38 E-value=1e-11 Score=114.13 Aligned_cols=167 Identities=14% Similarity=0.054 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~ 145 (478)
+..++.+|..++..|+|++|+.+|.+++++... +++..+..+.+|+.+|.+++..++.+..+--. .
T Consensus 38 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~--~----------- 103 (258)
T 3uq3_A 38 ITYLNNRAAAEYEKGEYETAISTLNDAVEQGRE-MRADYKVISKSFARIGNAYHKLGDLKKTIEYY--Q----------- 103 (258)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHH--H-----------
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcc-cccchHHHHHHHHHHHHHHHHcccHHHHHHHH--H-----------
Confidence 456889999999999999999999999998543 33455666999999999999875543221000 0
Q ss_pred ccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011759 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (478)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~ 225 (478)
.... . ....+.-.....++.|+.+|.+.
T Consensus 104 -~a~~--~-------------------------------------------------~~~~~~~~~~~~~~~a~~~~~~~ 131 (258)
T 3uq3_A 104 -KSLT--E-------------------------------------------------HRTADILTKLRNAEKELKKAEAE 131 (258)
T ss_dssp -HHHH--H-------------------------------------------------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHh--c-------------------------------------------------CchhHHHHHHhHHHHHHHHHHHH
Confidence 0000 0 00012222233445555566665
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Q 011759 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 226 l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~ 305 (478)
....+..+.+|..+|.++...|+|++|+.+|++++.+... ...+|++||.+|...|++++|+.+|++++.+.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~--------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 203 (258)
T 3uq3_A 132 AYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE--------DARGYSNRAAALAKLMSFPEAIADCNKAIEKD 203 (258)
T ss_dssp HHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc--------cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 5556778899999999999999999999999999987532 25889999999999999999999999998864
Q ss_pred H
Q 011759 306 K 306 (478)
Q Consensus 306 k 306 (478)
.
T Consensus 204 ~ 204 (258)
T 3uq3_A 204 P 204 (258)
T ss_dssp T
T ss_pred H
Confidence 3
No 49
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.38 E-value=5.1e-12 Score=123.26 Aligned_cols=144 Identities=13% Similarity=0.118 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~ 145 (478)
+..+..+|..++..|+|++|+.+|.+++++ +|....+|+.+|.+++..
T Consensus 217 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~~~~~~~~~~l~~~~~~~------------------------ 264 (368)
T 1fch_A 217 PDVQCGLGVLFNLSGEYDKAVDCFTAALSV--------RPNDYLLWNKLGATLANG------------------------ 264 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CcCCHHHHHHHHHHHHHc------------------------
Confidence 455666777777777777777777777776 566667777777777654
Q ss_pred ccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011759 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (478)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~ 225 (478)
++++.|...|+.++.+
T Consensus 265 ------------------------------------------------------------g~~~~A~~~~~~al~~---- 280 (368)
T 1fch_A 265 ------------------------------------------------------------NQSEEAVAAYRRALEL---- 280 (368)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHH----
T ss_pred ------------------------------------------------------------CCHHHHHHHHHHHHHh----
Confidence 4567777777777665
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCC---CChHHHHHHHHHHHHHHcCCCchHHHHHHHHHH
Q 011759 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEP---DSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (478)
Q Consensus 226 l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~---d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL 302 (478)
.+....+|.+||.++...|+|++|+.+|++++.+.....++ .++..+.+|++||.+|...|++++|..+++++|
T Consensus 281 ---~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l 357 (368)
T 1fch_A 281 ---QPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAYGAADARDL 357 (368)
T ss_dssp ---CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGGHHHHHTTCH
T ss_pred ---CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHhHHHhHHHHH
Confidence 24567899999999999999999999999999999877433 355678999999999999999999999999999
Q ss_pred HHHHHH
Q 011759 303 SVCKSR 308 (478)
Q Consensus 303 ~I~k~r 308 (478)
++++..
T Consensus 358 ~~~~~~ 363 (368)
T 1fch_A 358 STLLTM 363 (368)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 987754
No 50
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.37 E-value=8.4e-12 Score=118.14 Aligned_cols=143 Identities=12% Similarity=0.088 Sum_probs=119.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~ 145 (478)
+..++.+|..++..|+|++|+.+|.++++.. +.++....+||++|.+++..
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~-----p~~~~~~~a~~~lg~~~~~~------------------------ 65 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYG-----RTHEWAADAQFYLARAYYQN------------------------ 65 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGC-----SCSTTHHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-----CCCcchHHHHHHHHHHHHHh------------------------
Confidence 6789999999999999999999999999862 34555599999999999975
Q ss_pred ccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011759 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (478)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~ 225 (478)
++++.|...|+.++.++-
T Consensus 66 ------------------------------------------------------------~~~~~A~~~~~~~l~~~p-- 83 (261)
T 3qky_A 66 ------------------------------------------------------------KEYLLAASEYERFIQIYQ-- 83 (261)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHHCT--
T ss_pred ------------------------------------------------------------CcHHHHHHHHHHHHHHCC--
Confidence 457788888888876642
Q ss_pred cCCCchHHHHHHHHHHHHHh--------cCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHH--------------HHHHH
Q 011759 226 WGDSMEKVDILSALAEVALE--------REDIETSLSDYQKALTILERMVEPDSRHIAELN--------------FRICL 283 (478)
Q Consensus 226 l~~~~~~Ad~~~~LGev~le--------~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~--------------~~LG~ 283 (478)
.++....+|..||.+++. .|+|++|+..|++++.+.. +++....++ ++||.
T Consensus 84 --~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p-----~~~~~~~a~~~~~~~~~~~~~~~~~la~ 156 (261)
T 3qky_A 84 --IDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYP-----NHELVDDATQKIRELRAKLARKQYEAAR 156 (261)
T ss_dssp --TCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCT-----TCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCc-----CchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 234678999999999999 9999999999999998753 344444444 99999
Q ss_pred HHHcCCCchHHHHHHHHHHHHHH
Q 011759 284 CLEIGSKPQEAIPYCQKAISVCK 306 (478)
Q Consensus 284 ay~~~~~~eeAl~~~ekAL~I~k 306 (478)
+|...|+|++|+.+|++++....
T Consensus 157 ~~~~~g~~~~A~~~~~~~l~~~p 179 (261)
T 3qky_A 157 LYERRELYEAAAVTYEAVFDAYP 179 (261)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHccCHHHHHHHHHHHHHHCC
Confidence 99999999999999999998643
No 51
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.37 E-value=1.5e-11 Score=120.90 Aligned_cols=89 Identities=18% Similarity=0.176 Sum_probs=71.9
Q ss_pred cCcChHHHHHHHHHHHHHHHHHhcCCCch--HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 011759 203 EDESDLDLAWKMLDVARAIAEKHWGDSME--KVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFR 280 (478)
Q Consensus 203 Ed~ddle~AwE~Le~Ar~I~ek~l~~~~~--~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~ 280 (478)
...++++.|..+|+.++.+. +. .+.+|.+||.++...|+|++|+..|++++.+... .+.+|++
T Consensus 188 ~~~g~~~~A~~~~~~al~~~-------p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~--------~~~~~~~ 252 (365)
T 4eqf_A 188 VDSSVLEGVKELYLEAAHQN-------GDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPE--------DYSLWNR 252 (365)
T ss_dssp -CCHHHHHHHHHHHHHHHHS-------CSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT--------CHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHhC-------cCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC--------CHHHHHH
Confidence 34566777777777666552 23 5789999999999999999999999999987432 3678999
Q ss_pred HHHHHHcCCCchHHHHHHHHHHHHHH
Q 011759 281 ICLCLEIGSKPQEAIPYCQKAISVCK 306 (478)
Q Consensus 281 LG~ay~~~~~~eeAl~~~ekAL~I~k 306 (478)
||.+|...|++++|+.+|++++.+..
T Consensus 253 l~~~~~~~g~~~~A~~~~~~al~~~p 278 (365)
T 4eqf_A 253 LGATLANGDRSEEAVEAYTRALEIQP 278 (365)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 99999999999999999999998743
No 52
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.36 E-value=1e-11 Score=122.03 Aligned_cols=50 Identities=18% Similarity=0.091 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhh
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQ 123 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~ 123 (478)
+..++.+|..++..|+|++|+.+|.+++++ +|..+.+|+.+|.+++.+++
T Consensus 65 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~ 114 (365)
T 4eqf_A 65 WPGAFEEGLKRLKEGDLPVTILFMEAAILQ--------DPGDAEAWQFLGITQAENEN 114 (365)
T ss_dssp CTTHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CcCCHHHHHHHHHHHHHCCC
Confidence 456889999999999999999999999998 68889999999999998743
No 53
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.36 E-value=4e-11 Score=107.91 Aligned_cols=169 Identities=11% Similarity=0.017 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCc--cCCCCCCcCCCCC
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQ 141 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdv--Lg~~~~~~~e~~~ 141 (478)
..+..++.+|..++..|+|++|+.+|.+++++ +|....+|+.+|.+++..++.+... +.....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~------- 70 (225)
T 2vq2_A 6 QVSNIKTQLAMEYMRGQDYRQATASIEDALKS--------DPKNELAWLVRAEIYQYLKVNDKAQESFRQALS------- 70 (225)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-------
T ss_pred ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh--------CccchHHHHHHHHHHHHcCChHHHHHHHHHHHH-------
Confidence 34678899999999999999999999999997 6778899999999999874432210 000000
Q ss_pred CCCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCc-ChHHHHHHHHHHHHH
Q 011759 142 GSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDE-SDLDLAWKMLDVARA 220 (478)
Q Consensus 142 ~~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~-ddle~AwE~Le~Ar~ 220 (478)
..+... ... -..+...-.. ++++.|..+|+.++.
T Consensus 71 -----------~~~~~~------~~~----------------------------~~l~~~~~~~~~~~~~A~~~~~~~~~ 105 (225)
T 2vq2_A 71 -----------IKPDSA------EIN----------------------------NNYGWFLCGRLNRPAESMAYFDKALA 105 (225)
T ss_dssp -----------HCTTCH------HHH----------------------------HHHHHHHHTTTCCHHHHHHHHHHHHT
T ss_pred -----------hCCCCh------HHH----------------------------HHHHHHHHHhcCcHHHHHHHHHHHHc
Confidence 000000 000 0000001123 445555555544443
Q ss_pred HHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHH
Q 011759 221 IAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQK 300 (478)
Q Consensus 221 I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ek 300 (478)
....+....+|..+|.++...|+|++|+..|++++.+. +.+ ..+++.||.+|...|++++|+.+|++
T Consensus 106 -----~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-----~~~---~~~~~~la~~~~~~~~~~~A~~~~~~ 172 (225)
T 2vq2_A 106 -----DPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQ-----PQF---PPAFKELARTKMLAGQLGDADYYFKK 172 (225)
T ss_dssp -----STTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----TTC---HHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred -----CcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCC---chHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 11234556677777777777777777777777776542 222 45667777777777777777777777
Q ss_pred HHHHH
Q 011759 301 AISVC 305 (478)
Q Consensus 301 AL~I~ 305 (478)
++.+.
T Consensus 173 ~~~~~ 177 (225)
T 2vq2_A 173 YQSRV 177 (225)
T ss_dssp HHHHH
T ss_pred HHHhC
Confidence 66553
No 54
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.35 E-value=1.1e-12 Score=118.14 Aligned_cols=84 Identities=15% Similarity=0.115 Sum_probs=72.7
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|...|+.++.+ .|..+.+|++||.++..+|+|++|+.+|++++.+.+.. +.+||+||.||
T Consensus 50 g~~~eA~~~~~~al~~-------~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~--------~~~~~~lg~~~ 114 (151)
T 3gyz_A 50 GRIEEAEVFFRFLCIY-------DFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKND--------YTPVFHTGQCQ 114 (151)
T ss_dssp TCHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSC--------CHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh-------CCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCC--------cHHHHHHHHHH
Confidence 3566777777777655 45678899999999999999999999999999987543 37899999999
Q ss_pred HcCCCchHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I 304 (478)
..+|++++|+.+|++|+.+
T Consensus 115 ~~lg~~~eA~~~~~~al~l 133 (151)
T 3gyz_A 115 LRLKAPLKAKECFELVIQH 133 (151)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHh
Confidence 9999999999999999976
No 55
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.34 E-value=3.9e-11 Score=113.51 Aligned_cols=169 Identities=14% Similarity=0.100 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~ 145 (478)
...++.+|..++.+|+|++|+.+|.+++.+. +.++....+||++|.+++..+.. .
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~-----p~~~~~~~a~~~lg~~~~~~~~~--------~------------ 106 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIY-----QIDPRVPQAEYERAMCYYKLSPP--------Y------------ 106 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTCTTHHHHHHHHHHHHHHHCCC--------T------------
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHC-----CCCchhHHHHHHHHHHHHHhccc--------c------------
Confidence 6678999999999999999999999999973 44668899999999999986210 0
Q ss_pred ccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011759 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (478)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~ 225 (478)
.-+.++++.|...|+.++.++-..
T Consensus 107 --------------------------------------------------------~~~~~~~~~A~~~~~~~l~~~p~~ 130 (261)
T 3qky_A 107 --------------------------------------------------------ELDQTDTRKAIEAFQLFIDRYPNH 130 (261)
T ss_dssp --------------------------------------------------------TSCCHHHHHHHHHHHHHHHHCTTC
T ss_pred --------------------------------------------------------cccchhHHHHHHHHHHHHHHCcCc
Confidence 011367888888887777654322
Q ss_pred cCC----------CchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcC-------
Q 011759 226 WGD----------SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIG------- 288 (478)
Q Consensus 226 l~~----------~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~------- 288 (478)
... ...++..+..||.++...|+|++|+..|++++.+. |+++....++++||.+|..+
T Consensus 131 ~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~-----p~~~~~~~a~~~l~~~~~~~g~~~~~~ 205 (261)
T 3qky_A 131 ELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAY-----PDTPWADDALVGAMRAYIAYAEQSVRA 205 (261)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTSTTHHHHHHHHHHHHHHHHHTSCGG
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHC-----CCCchHHHHHHHHHHHHHHhcccchhh
Confidence 110 01234445999999999999999999999999864 45666789999999999977
Q ss_pred ---CCchHHHHHHHHHHHHH---------HHHHHHHHHHHHhhc
Q 011759 289 ---SKPQEAIPYCQKAISVC---------KSRVQRLLNEVKSLG 320 (478)
Q Consensus 289 ---~~~eeAl~~~ekAL~I~---------k~rl~~l~~~l~~~~ 320 (478)
+++++|+.+|++++... ...|..+...+....
T Consensus 206 ~~~~~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~~~~~~~~~~ 249 (261)
T 3qky_A 206 RQPERYRRAVELYERLLQIFPDSPLLRTAEELYTRARQRLTELE 249 (261)
T ss_dssp GHHHHHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHhh
Confidence 89999999999999764 234555555555543
No 56
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.34 E-value=5.6e-11 Score=97.28 Aligned_cols=131 Identities=27% Similarity=0.366 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCCc
Q 011759 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKD 146 (478)
Q Consensus 67 ~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~d 146 (478)
..++.+|..++..|+|++|..+|.+++++ +|....+|+.+|.+++..
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~a~~~~~~------------------------- 48 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPRSAEAWYNLGNAYYKQ------------------------- 48 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHH-------------------------
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHc--------CCcchhHHHHHHHHHHHh-------------------------
Confidence 45778999999999999999999999987 567788999999998865
Q ss_pred cccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHhc
Q 011759 147 DSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHW 226 (478)
Q Consensus 147 e~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~l 226 (478)
++++.|..+|+.++.+.
T Consensus 49 -----------------------------------------------------------~~~~~A~~~~~~~~~~~---- 65 (136)
T 2fo7_A 49 -----------------------------------------------------------GDYDEAIEYYQKALELD---- 65 (136)
T ss_dssp -----------------------------------------------------------TCHHHHHHHHHHHHHHC----
T ss_pred -----------------------------------------------------------cCHHHHHHHHHHHHHHC----
Confidence 34667777777776542
Q ss_pred CCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 227 GDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 227 ~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
+....++..||.++...|+|++|+..|++++.+.. .+ ..+++.||.+|...|++++|+.+|++++.+
T Consensus 66 ---~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-----~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 132 (136)
T 2fo7_A 66 ---PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP-----RS---AEAWYNLGNAYYKQGDYDEAIEYYQKALEL 132 (136)
T ss_dssp ---TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT-----TC---HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred ---CCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC-----CC---hHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 23467899999999999999999999999998642 22 578999999999999999999999999865
No 57
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.33 E-value=3e-11 Score=111.02 Aligned_cols=125 Identities=18% Similarity=0.050 Sum_probs=106.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhC----CCChhHHHHHHHHHHHHHhhhhccCCccCCCCC
Q 011759 59 REKTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYG----ELALECVNAYYQYGRALLYKAQEEADPLVSVPK 134 (478)
Q Consensus 59 ~~~~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~G----e~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~ 134 (478)
|-+....|..++++|..++..|+|++|+.+|.+|+++.-.... ...|..+.+|++.|.+|..+
T Consensus 4 ~~~~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~L------------- 70 (159)
T 2hr2_A 4 PLKEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGL------------- 70 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHT-------------
T ss_pred cHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHC-------------
Confidence 4556778999999999999999999999999999999643111 11233567999999999876
Q ss_pred CcCCCCCCCCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHH
Q 011759 135 KEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKM 214 (478)
Q Consensus 135 ~~~e~~~~~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~ 214 (478)
++|+.|...
T Consensus 71 -----------------------------------------------------------------------gr~~eAl~~ 79 (159)
T 2hr2_A 71 -----------------------------------------------------------------------RSFDEALHS 79 (159)
T ss_dssp -----------------------------------------------------------------------TCHHHHHHH
T ss_pred -----------------------------------------------------------------------CCHHHHHHH
Confidence 457788999
Q ss_pred HHHHHHHHHHhcCCCchHHHHH----HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhc
Q 011759 215 LDVARAIAEKHWGDSMEKVDIL----SALAEVALEREDIETSLSDYQKALTILERMV 267 (478)
Q Consensus 215 Le~Ar~I~ek~l~~~~~~Ad~~----~~LGev~le~g~feeAl~dy~kAL~I~~~ll 267 (478)
++.|+.||.+.+.-.+..+.+| +++|.++..+|+|++|+.+|++||+|...--
T Consensus 80 ~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~ 136 (159)
T 2hr2_A 80 ADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK 136 (159)
T ss_dssp HHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcH
Confidence 9999999999988778888999 9999999999999999999999999988753
No 58
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.33 E-value=3.9e-11 Score=107.28 Aligned_cols=99 Identities=11% Similarity=0.068 Sum_probs=87.3
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|..+++.|+.++.+.. ..+..+.+|.+||.++...|+|++|+.+|++++.+.+.. +.+....+.++++||.+|
T Consensus 40 g~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~lg~~~ 117 (203)
T 3gw4_A 40 DRFDEARASFQALQQQAQKSG-DHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASL-PEDPLAASANAYEVATVA 117 (203)
T ss_dssp TCHHHHHHHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-CCCHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHcC-CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc-CccHHHHHHHHHHHHHHH
Confidence 467889999999999998653 456789999999999999999999999999999999853 434457899999999999
Q ss_pred HcCCCchHHHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISVCK 306 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I~k 306 (478)
...|++++|+.+|++++.+.+
T Consensus 118 ~~~g~~~~A~~~~~~al~~~~ 138 (203)
T 3gw4_A 118 LHFGDLAGARQEYEKSLVYAQ 138 (203)
T ss_dssp HHHTCHHHHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHH
Confidence 999999999999999998854
No 59
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.33 E-value=6.3e-11 Score=102.82 Aligned_cols=168 Identities=14% Similarity=0.120 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCC
Q 011759 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (478)
Q Consensus 65 ~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~ 144 (478)
.+..++.+|..++..|+|++|+.+|.+++++ +|....+|+.+|.+++..++.+...--. .
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~A~~~~--~---------- 66 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYDA--------DAFDVDVALHLGIAYVKTGAVDRGTELL--E---------- 66 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCCT--------TSCCHHHHHHHHHHHHHTTCHHHHHHHH--H----------
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CccChHHHHHHHHHHHHcCCHHHHHHHH--H----------
Confidence 3566777777788888888888888777764 4566777778887777764432211000 0
Q ss_pred CccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011759 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (478)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek 224 (478)
.... ..+... ... -..+...-..++++.|+++|+.++.+
T Consensus 67 --~~~~--~~~~~~------~~~----------------------------~~~a~~~~~~~~~~~A~~~~~~~~~~--- 105 (186)
T 3as5_A 67 --RSLA--DAPDNV------KVA----------------------------TVLGLTYVQVQKYDLAVPLLIKVAEA--- 105 (186)
T ss_dssp --HHHH--HCTTCH------HHH----------------------------HHHHHHHHHHTCHHHHHHHHHHHHHH---
T ss_pred --HHHh--cCCCCH------HHH----------------------------HHHHHHHHHhcCHHHHHHHHHHHHhc---
Confidence 0000 000000 000 00000001124566677666666554
Q ss_pred hcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 225 ~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
.+....++..+|.++...|+|++|+..|++++.+.. .+ ..+++.||.+|...|++++|+.+|++++.+
T Consensus 106 ----~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-----~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 173 (186)
T 3as5_A 106 ----NPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRP-----NE---GKVHRAIAFSYEQMGRHEEALPHFKKANEL 173 (186)
T ss_dssp ----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ----CcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCc-----cc---hHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 234567899999999999999999999999998742 22 588999999999999999999999999876
Q ss_pred H
Q 011759 305 C 305 (478)
Q Consensus 305 ~ 305 (478)
.
T Consensus 174 ~ 174 (186)
T 3as5_A 174 D 174 (186)
T ss_dssp H
T ss_pred C
Confidence 3
No 60
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.32 E-value=3.3e-11 Score=111.71 Aligned_cols=51 Identities=18% Similarity=0.182 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhh
Q 011759 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQ 123 (478)
Q Consensus 65 ~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~ 123 (478)
.+..++.+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+++..++
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~la~~~~~~~~ 86 (252)
T 2ho1_A 36 ARDAYIQLGLGYLQRGNTEQAKVPLRKALEI--------DPSSADAHAALAVVFQTEME 86 (252)
T ss_dssp HHHHHHHHHHHHHHTTCTGGGHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHhc--------CCChHHHHHHHHHHHHHcCC
Confidence 4888999999999999999999999999998 57788999999999998743
No 61
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.32 E-value=2.1e-11 Score=105.16 Aligned_cols=84 Identities=17% Similarity=0.145 Sum_probs=73.6
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++|+.|.+.|+.|+.+ .+..+.+|.++|.+++.+|+|++|+.+|++||++... .+.+|++||.+|
T Consensus 27 g~~~~A~~~~~~al~~-------~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~--------~~~a~~~lg~~~ 91 (126)
T 4gco_A 27 GDYPTAMRHYNEAVKR-------DPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSK--------FIKGYIRKAACL 91 (126)
T ss_dssp TCHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--------CHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh-------CCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhh--------hhHHHHHHHHHH
Confidence 4678888888888765 3456889999999999999999999999999998433 258999999999
Q ss_pred HcCCCchHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I 304 (478)
..+|+|++|+.+|+++|++
T Consensus 92 ~~~~~~~~A~~~~~~al~l 110 (126)
T 4gco_A 92 VAMREWSKAQRAYEDALQV 110 (126)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHH
Confidence 9999999999999999986
No 62
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.32 E-value=9.1e-11 Score=116.10 Aligned_cols=153 Identities=16% Similarity=0.047 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCC-hhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCC
Q 011759 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELA-LECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (478)
Q Consensus 65 ~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~-pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~ 143 (478)
.+..++.+|..++..|+|++|..+|.+++.+. .... ...+.+++.+|.+++..
T Consensus 13 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~----~~~~~~~~~~~~~~l~~~~~~~---------------------- 66 (373)
T 1hz4_A 13 HAEFNALRAQVAINDGNPDEAERLAKLALEEL----PPGWFYSRIVATSVLGEVLHCK---------------------- 66 (373)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC----CTTCHHHHHHHHHHHHHHHHHH----------------------
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcC----CCCchhHHHHHHHHHHHHHHhc----------------------
Confidence 46677889999999999999999999999863 2222 23566888888888765
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
++++.|..+|+.|+.++.
T Consensus 67 --------------------------------------------------------------g~~~~A~~~~~~al~~~~ 84 (373)
T 1hz4_A 67 --------------------------------------------------------------GELTRSLALMQQTEQMAR 84 (373)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------CcHHHHHHHHHHHHHHHH
Confidence 457788999999999887
Q ss_pred HhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Q 011759 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (478)
Q Consensus 224 k~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~ 303 (478)
+.. .....+.++.+||.+++..|+|++|+.+|+++|.+.+...++.++..+.+|++||.+|...|++++|+.+|++++.
T Consensus 85 ~~~-~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 163 (373)
T 1hz4_A 85 QHD-VWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIE 163 (373)
T ss_dssp HTT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hcC-cHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 753 3445688999999999999999999999999999999988877889999999999999999999999999999998
Q ss_pred HHH
Q 011759 304 VCK 306 (478)
Q Consensus 304 I~k 306 (478)
+..
T Consensus 164 ~~~ 166 (373)
T 1hz4_A 164 VLS 166 (373)
T ss_dssp HTT
T ss_pred Hhh
Confidence 754
No 63
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.32 E-value=4e-11 Score=116.93 Aligned_cols=82 Identities=12% Similarity=0.092 Sum_probs=64.9
Q ss_pred HHHHHHHHHhcCCCch--HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchH
Q 011759 216 DVARAIAEKHWGDSME--KVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQE 293 (478)
Q Consensus 216 e~Ar~I~ek~l~~~~~--~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~ee 293 (478)
+.|+.+|.+.+...+. .+.+|..||.++...|+|++|+.+|++++.+.. ..+.+|++||.+|...|++++
T Consensus 198 ~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~--------~~~~~~~~l~~~~~~~g~~~~ 269 (368)
T 1fch_A 198 LEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRP--------NDYLLWNKLGATLANGNQSEE 269 (368)
T ss_dssp HHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc--------CCHHHHHHHHHHHHHcCCHHH
Confidence 4444444443332334 688999999999999999999999999998732 235789999999999999999
Q ss_pred HHHHHHHHHHHH
Q 011759 294 AIPYCQKAISVC 305 (478)
Q Consensus 294 Al~~~ekAL~I~ 305 (478)
|+.+|++++.+.
T Consensus 270 A~~~~~~al~~~ 281 (368)
T 1fch_A 270 AVAAYRRALELQ 281 (368)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 999999998864
No 64
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.30 E-value=1.6e-11 Score=128.68 Aligned_cols=175 Identities=17% Similarity=0.146 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccC--CCCCCcCCCCCC
Q 011759 66 ADELMEKGTNALKESDY-GEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLV--SVPKKEGDSQQG 142 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy-~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg--~~~~~~~e~~~~ 142 (478)
+..++.+|..++..|+| ++|+.+|.+|+++ .|..+.+|+.+|.+|+..++.+.+.-- .+...
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~------- 166 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKL--------EPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTH------- 166 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT-------
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-------
Confidence 67789999999999999 9999999999998 789999999999999998766443110 00000
Q ss_pred CCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011759 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 222 (478)
Q Consensus 143 ~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ 222 (478)
++. ...-. .... -.... . .+...+..++++.|.+.|+.|+.+
T Consensus 167 -----------~p~-~~~~~--~lg~--~~~~~-------~--------------~~~~~~~~g~~~~A~~~~~~al~~- 208 (474)
T 4abn_A 167 -----------CKN-KVSLQ--NLSM--VLRQL-------Q--------------TDSGDEHSRHVMDSVRQAKLAVQM- 208 (474)
T ss_dssp -----------CCC-HHHHH--HHHH--HHTTC-------C--------------CSCHHHHHHHHHHHHHHHHHHHHH-
T ss_pred -----------CCC-HHHHH--HHHH--HHHHh-------c--------------cCChhhhhhhHHHHHHHHHHHHHh-
Confidence 000 00000 0000 00000 0 000011226777777777777665
Q ss_pred HHhcCCCchHHHHHHHHHHHHHhc--------CCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHH
Q 011759 223 EKHWGDSMEKVDILSALAEVALER--------EDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEA 294 (478)
Q Consensus 223 ek~l~~~~~~Ad~~~~LGev~le~--------g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeA 294 (478)
.+..+.+|.+||.+++.. |+|++|+.+|++++.+... ++..+.+|++||.+|...|+|++|
T Consensus 209 ------~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-----~~~~~~~~~~lg~~~~~~g~~~~A 277 (474)
T 4abn_A 209 ------DVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRK-----ASSNPDLHLNRATLHKYEESYGEA 277 (474)
T ss_dssp ------CTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGG-----GGGCHHHHHHHHHHHHHTTCHHHH
T ss_pred ------CCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCC-----cccCHHHHHHHHHHHHHcCCHHHH
Confidence 345678999999999999 9999999999999998431 225579999999999999999999
Q ss_pred HHHHHHHHHH
Q 011759 295 IPYCQKAISV 304 (478)
Q Consensus 295 l~~~ekAL~I 304 (478)
+.+|++|+.+
T Consensus 278 ~~~~~~al~l 287 (474)
T 4abn_A 278 LEGFSQAAAL 287 (474)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999975
No 65
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.30 E-value=4.1e-11 Score=120.08 Aligned_cols=145 Identities=15% Similarity=0.147 Sum_probs=116.2
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhC-------CCChhHHHHHHHHHHHHHhhhhccCCccCCCCC
Q 011759 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYG-------ELALECVNAYYQYGRALLYKAQEEADPLVSVPK 134 (478)
Q Consensus 62 ~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~G-------e~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~ 134 (478)
....+..+..+|..++..|+|++|+.+|.+|+++.-.... ...+..+.+|+++|.+|+.+
T Consensus 143 ~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~------------- 209 (336)
T 1p5q_A 143 KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKL------------- 209 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHT-------------
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHc-------------
Confidence 4456889999999999999999999999999998311100 01122379999999999875
Q ss_pred CcCCCCCCCCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHH
Q 011759 135 KEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKM 214 (478)
Q Consensus 135 ~~~e~~~~~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~ 214 (478)
++++.|...
T Consensus 210 -----------------------------------------------------------------------g~~~~A~~~ 218 (336)
T 1p5q_A 210 -----------------------------------------------------------------------QAFSAAIES 218 (336)
T ss_dssp -----------------------------------------------------------------------TCHHHHHHH
T ss_pred -----------------------------------------------------------------------CCHHHHHHH
Confidence 357778888
Q ss_pred HHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHH
Q 011759 215 LDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEA 294 (478)
Q Consensus 215 Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeA 294 (478)
|+.|+.+ .+..+.+|++||.++..+|+|++|+.+|+++|++.. ++ ..++++||.+|...+++++|
T Consensus 219 ~~~al~~-------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P-----~~---~~a~~~l~~~~~~~~~~~~a 283 (336)
T 1p5q_A 219 CNKALEL-------DSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYP-----NN---KAAKTQLAVCQQRIRRQLAR 283 (336)
T ss_dssp HHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS-----SC---HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHh-------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC-----CC---HHHHHHHHHHHHHHHHHHHH
Confidence 8888766 245688999999999999999999999999999843 22 57999999999999999988
Q ss_pred -HHHHHHHHHHH
Q 011759 295 -IPYCQKAISVC 305 (478)
Q Consensus 295 -l~~~ekAL~I~ 305 (478)
...|++.+..+
T Consensus 284 ~~~~~~~~~~~~ 295 (336)
T 1p5q_A 284 EKKLYANMFERL 295 (336)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 56777776543
No 66
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.29 E-value=2.8e-11 Score=113.27 Aligned_cols=174 Identities=10% Similarity=-0.012 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccC--CCCCCcCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLV--SVPKKEGDSQQGS 143 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg--~~~~~~~e~~~~~ 143 (478)
+..++.+|..++..|+|++|+.+|.+++++ +|....+|+.+|.+++..++.+..+-- .+...
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-------- 137 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVDR--------DTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRP-------- 137 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCS--------
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhc--------CcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhc--------
Confidence 455778888888888888888888888886 677778888888888887655432110 00000
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
++... ... -..+..--...+++.|.+.|+.++.+
T Consensus 138 ----------~~~~~------~~~----------------------------~~l~~~~~~~~~~~~A~~~~~~a~~~-- 171 (272)
T 3u4t_A 138 ----------TTTDP------KVF----------------------------YELGQAYYYNKEYVKADSSFVKVLEL-- 171 (272)
T ss_dssp ----------SCCCH------HHH----------------------------HHHHHHHHHTTCHHHHHHHHHHHHHH--
T ss_pred ----------CCCcH------HHH----------------------------HHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 00000 000 00000000012555565555555543
Q ss_pred HhcCCCchHHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHH
Q 011759 224 KHWGDSMEKVDILSALAEVALERED---IETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQK 300 (478)
Q Consensus 224 k~l~~~~~~Ad~~~~LGev~le~g~---feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ek 300 (478)
.+....+|..+|.++...++ |++|+.+|++++++......+....++.+|+.||.+|...|++++|+.+|++
T Consensus 172 -----~p~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 246 (272)
T 3u4t_A 172 -----KPNIYIGYLWRARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRDKVKADAAWKN 246 (272)
T ss_dssp -----STTCHHHHHHHHHHHHHHSTTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred -----CccchHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 34457899999999999999 9999999999999997665443455789999999999999999999999999
Q ss_pred HHHHHH
Q 011759 301 AISVCK 306 (478)
Q Consensus 301 AL~I~k 306 (478)
++.+..
T Consensus 247 al~~~p 252 (272)
T 3u4t_A 247 ILALDP 252 (272)
T ss_dssp HHHHCT
T ss_pred HHhcCc
Confidence 998744
No 67
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.29 E-value=7.5e-12 Score=112.33 Aligned_cols=157 Identities=11% Similarity=0.052 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCc--cCCCCCCcCCCCCCCC
Q 011759 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGSD 144 (478)
Q Consensus 67 ~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdv--Lg~~~~~~~e~~~~~~ 144 (478)
..++.+|..++..|+|++|+.+|.+++++ +|.+..+++.+|.+|+..++.+..+ |-.+...
T Consensus 7 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~--------- 69 (176)
T 2r5s_A 7 EQLLKQVSELLQQGEHAQALNVIQTLSDE--------LQSRGDVKLAKADCLLETKQFELAQELLATIPLE--------- 69 (176)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHTSCHH--------HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGG---------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhc---------
Confidence 45788999999999999999999999998 6999999999999999987654321 1110000
Q ss_pred CccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHH---HHH-----
Q 011759 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWK---MLD----- 216 (478)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE---~Le----- 216 (478)
.....+...+- +..
T Consensus 70 ----------------------------------------------------------~p~~~~~~~~~~~~~~~~~~~~ 91 (176)
T 2r5s_A 70 ----------------------------------------------------------YQDNSYKSLIAKLELHQQAAES 91 (176)
T ss_dssp ----------------------------------------------------------GCCHHHHHHHHHHHHHHHHTSC
T ss_pred ----------------------------------------------------------cCChHHHHHHHHHHHHhhcccc
Confidence 00000100000 000
Q ss_pred HHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHH
Q 011759 217 VARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIP 296 (478)
Q Consensus 217 ~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~ 296 (478)
.|+..|++.+...+....+|.+||.++...|+|++|+..|+++|++..... -..++++||.+|...|++++|+.
T Consensus 92 ~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~------~~~a~~~l~~~~~~~g~~~~A~~ 165 (176)
T 2r5s_A 92 PELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQ------DGEVKKTFMDILSALGQGNAIAS 165 (176)
T ss_dssp HHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTT------TTHHHHHHHHHHHHHCSSCHHHH
T ss_pred hHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccC------hHHHHHHHHHHHHHhCCCCcHHH
Confidence 123444444433456789999999999999999999999999987753321 13689999999999999999999
Q ss_pred HHHHHHHH
Q 011759 297 YCQKAISV 304 (478)
Q Consensus 297 ~~ekAL~I 304 (478)
+|+++|..
T Consensus 166 ~y~~al~~ 173 (176)
T 2r5s_A 166 KYRRQLYS 173 (176)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999865
No 68
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.29 E-value=3.1e-11 Score=117.79 Aligned_cols=162 Identities=11% Similarity=0.071 Sum_probs=119.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCC--ccCCCCCCcCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEAD--PLVSVPKKEGDSQQGS 143 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esd--vLg~~~~~~~e~~~~~ 143 (478)
...++.+|..++..|+|++|+.+|.+++++ +|.++.+++.+|.+|+..++.+.. .|..++...
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~------- 181 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQL--------SNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQD------- 181 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------TTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGG-------
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHh--------CCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhh-------
Confidence 567899999999999999999999999998 799999999999999998766433 111111000
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHH-----HHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKML-----DVA 218 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~L-----e~A 218 (478)
++ .....+..+..++ +.|
T Consensus 182 --------------------p~-------------------------------------~~~~~~~~~~~l~~~~~~~~a 204 (287)
T 3qou_A 182 --------------------QD-------------------------------------TRYQGLVAQIELLXQAADTPE 204 (287)
T ss_dssp --------------------CS-------------------------------------HHHHHHHHHHHHHHHHTSCHH
T ss_pred --------------------cc-------------------------------------hHHHHHHHHHHHHhhcccCcc
Confidence 00 0000111111111 113
Q ss_pred HHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHH
Q 011759 219 RAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYC 298 (478)
Q Consensus 219 r~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ 298 (478)
+..|++.+...+...+++++||.++...|+|++|+..|+++|++.... .-+.++++||.+|...|++++|+.+|
T Consensus 205 ~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~------~~~~a~~~l~~~~~~~g~~~~a~~~~ 278 (287)
T 3qou_A 205 IQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTA------ADGQTRXTFQEILAALGTGDALASXY 278 (287)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG------GGGHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc------ccchHHHHHHHHHHHcCCCCcHHHHH
Confidence 444444444456778999999999999999999999999999986543 12578999999999999999999999
Q ss_pred HHHHHHH
Q 011759 299 QKAISVC 305 (478)
Q Consensus 299 ekAL~I~ 305 (478)
+++|..+
T Consensus 279 r~al~~~ 285 (287)
T 3qou_A 279 RRQLYAL 285 (287)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998753
No 69
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.29 E-value=3.3e-11 Score=114.86 Aligned_cols=174 Identities=13% Similarity=0.084 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCC
Q 011759 66 ADELMEKGTNALKES-DYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (478)
Q Consensus 66 A~~L~~~G~~~~~~g-dy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~ 144 (478)
...++.+|..++..| +|++|+.+|.+++++ .|....+|+.+|.+++..++.+..+--. .
T Consensus 90 ~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~--~---------- 149 (330)
T 3hym_B 90 PVSWFAVGCYYLMVGHKNEHARRYLSKATTL--------EKTYGPAWIAYGHSFAVESEHDQAMAAY--F---------- 149 (330)
T ss_dssp THHHHHHHHHHHHSCSCHHHHHHHHHHHHTT--------CTTCTHHHHHHHHHHHHHTCHHHHHHHH--H----------
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHccCHHHHHHHH--H----------
Confidence 567889999999999 999999999999986 6778889999999999886654321000 0
Q ss_pred CccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011759 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (478)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek 224 (478)
.... ..+... .. . -..+......++++.|.+ .|.+
T Consensus 150 --~a~~--~~~~~~------~~--------~--------------------~~l~~~~~~~~~~~~A~~-------~~~~ 184 (330)
T 3hym_B 150 --TAAQ--LMKGCH------LP--------M--------------------LYIGLEYGLTNNSKLAER-------FFSQ 184 (330)
T ss_dssp --HHHH--HTTTCS------HH--------H--------------------HHHHHHHHHTTCHHHHHH-------HHHH
T ss_pred --HHHH--hccccH------HH--------H--------------------HHHHHHHHHHhhHHHHHH-------HHHH
Confidence 0000 000000 00 0 000000011234444444 4444
Q ss_pred hcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCC-hHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Q 011759 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDS-RHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (478)
Q Consensus 225 ~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~-r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~ 303 (478)
.+...+....++..||.++...|+|++|+..|++++.+.+....... +..+.+|++||.+|...|++++|+.+|++++.
T Consensus 185 al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 264 (330)
T 3hym_B 185 ALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALV 264 (330)
T ss_dssp HHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 44444566889999999999999999999999999999987665443 45578999999999999999999999999997
Q ss_pred H
Q 011759 304 V 304 (478)
Q Consensus 304 I 304 (478)
+
T Consensus 265 ~ 265 (330)
T 3hym_B 265 L 265 (330)
T ss_dssp H
T ss_pred h
Confidence 6
No 70
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.29 E-value=2.9e-11 Score=112.73 Aligned_cols=53 Identities=25% Similarity=0.119 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhc
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQE 124 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~ 124 (478)
..+..++.+|..++..|+|++|+.+|.+++++ +|....+|+.+|.+++..++.
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~la~~~~~~~~~ 93 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALAI--------RPDMPEVFNYLGIYLTQAGNF 93 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHTTCH
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHc--------CCCcHHHHHHHHHHHHHccCH
Confidence 45788899999999999999999999999998 688889999999999987543
No 71
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.28 E-value=1.8e-10 Score=96.91 Aligned_cols=122 Identities=16% Similarity=0.094 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCC
Q 011759 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (478)
Q Consensus 65 ~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~ 144 (478)
.+..++.+|..++..|+|++|+.+|.+++++ .|..+.+|+++|.+++.+
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~a~~~~~~----------------------- 51 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKR--------APEDARGYSNRAAALAKL----------------------- 51 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT-----------------------
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHh-----------------------
Confidence 5788999999999999999999999999998 688899999999999875
Q ss_pred CccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011759 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (478)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek 224 (478)
++++.|...|+.++.+
T Consensus 52 -------------------------------------------------------------~~~~~A~~~~~~al~~--- 67 (126)
T 3upv_A 52 -------------------------------------------------------------MSFPEAIADCNKAIEK--- 67 (126)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHH---
T ss_pred -------------------------------------------------------------cCHHHHHHHHHHHHHh---
Confidence 3567788888888765
Q ss_pred hcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHc
Q 011759 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI 287 (478)
Q Consensus 225 ~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~ 287 (478)
.+....+|..||.++..+|+|++|+.+|++++.+..... ..|.-..++..|+.++..
T Consensus 68 ----~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~--~~p~~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 68 ----DPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVN--NGSSAREIDQLYYKASQQ 124 (126)
T ss_dssp ----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH--TTTTHHHHHHHHHHHHHH
T ss_pred ----CCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccC--CchhHHHHHHHHHHHHHh
Confidence 245578999999999999999999999999999997664 233445667777766643
No 72
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.28 E-value=4.5e-11 Score=118.70 Aligned_cols=168 Identities=15% Similarity=0.135 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~ 145 (478)
+..++.+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+|+..++.+..+--. .
T Consensus 67 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~--~----------- 125 (388)
T 1w3b_A 67 AEAYSNLGNVYKERGQLQEAIEHYRHALRL--------KPDFIDGYINLAAALVAAGDMEGAVQAY--V----------- 125 (388)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHSCSSHHHHHH--H-----------
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHc--------CcchHHHHHHHHHHHHHcCCHHHHHHHH--H-----------
Confidence 456778888888888888888888888876 6777888888888888775543221000 0
Q ss_pred ccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011759 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (478)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~ 225 (478)
.... .++... .. . -..+......++++.|.++|+.++.+
T Consensus 126 -~al~--~~p~~~------~~--------~--------------------~~l~~~~~~~g~~~~A~~~~~~al~~---- 164 (388)
T 1w3b_A 126 -SALQ--YNPDLY------CV--------R--------------------SDLGNLLKALGRLEEAKACYLKAIET---- 164 (388)
T ss_dssp -HHHH--HCTTCT------HH--------H--------------------HHHHHHHHTTSCHHHHHHHHHHHHHH----
T ss_pred -HHHH--hCCCcH------HH--------H--------------------HHHHHHHHHccCHHHHHHHHHHHHHh----
Confidence 0000 000000 00 0 00000011235677777766666543
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Q 011759 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 226 l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~ 305 (478)
.+..+.+|.+||.++...|+|++|+.+|++++.+.. ....+|++||.+|...+++++|+.+|++++.+.
T Consensus 165 ---~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p--------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 233 (388)
T 1w3b_A 165 ---QPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP--------NFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 233 (388)
T ss_dssp ---CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHC
T ss_pred ---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC--------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 456788999999999999999999999999998742 336899999999999999999999999999875
Q ss_pred H
Q 011759 306 K 306 (478)
Q Consensus 306 k 306 (478)
.
T Consensus 234 p 234 (388)
T 1w3b_A 234 P 234 (388)
T ss_dssp T
T ss_pred c
Confidence 4
No 73
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.28 E-value=9.4e-12 Score=116.46 Aligned_cols=170 Identities=11% Similarity=0.079 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCCc
Q 011759 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKD 146 (478)
Q Consensus 67 ~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~d 146 (478)
+.++.+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+++..++.+..+--. .
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~--------~p~~~~~~~~l~~~~~~~~~~~~A~~~~--~------------ 61 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEAK--------KYNSPYIYNRRAVCYYELAKYDLAQKDI--E------------ 61 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHHT--------TCCCSTTHHHHHHHHHHTTCHHHHHHHH--H------------
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHHhhHHHHHHHH--H------------
Confidence 46789999999999999999999999987 5777789999999999886654321100 0
Q ss_pred cccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHhc
Q 011759 147 DSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHW 226 (478)
Q Consensus 147 e~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~l 226 (478)
.... .+... . .. .. . . -..+......++++.|.+.|+.++.+
T Consensus 62 ~a~~---~~~~~------~--------~~--~~---~---~--------~~lg~~~~~~~~~~~A~~~~~~a~~~----- 103 (272)
T 3u4t_A 62 TYFS---KVNAT------K--------AK--SA---D---F--------EYYGKILMKKGQDSLAIQQYQAAVDR----- 103 (272)
T ss_dssp HHHT---TSCTT------T--------CC--HH---H---H--------HHHHHHHHHTTCHHHHHHHHHHHHHH-----
T ss_pred HHHh---ccCch------h--------HH--HH---H---H--------HHHHHHHHHcccHHHHHHHHHHHHhc-----
Confidence 0000 00000 0 00 00 0 0 00000011224566666666555543
Q ss_pred CCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHH-HHHHcCCCchHHHHHHHHHHHHH
Q 011759 227 GDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC-LCLEIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 227 ~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG-~ay~~~~~~eeAl~~~ekAL~I~ 305 (478)
.+....+|..||.++...|+|++|+.+|++++.+ ++....+|++|| .+|. .+++++|+.+|++++.+.
T Consensus 104 --~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~ 172 (272)
T 3u4t_A 104 --DTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRP--------TTTDPKVFYELGQAYYY-NKEYVKADSSFVKVLELK 172 (272)
T ss_dssp --STTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCS--------SCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHS
T ss_pred --CcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhc--------CCCcHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhC
Confidence 3456789999999999999999999999999987 233468999999 5555 459999999999999986
Q ss_pred HH
Q 011759 306 KS 307 (478)
Q Consensus 306 k~ 307 (478)
..
T Consensus 173 p~ 174 (272)
T 3u4t_A 173 PN 174 (272)
T ss_dssp TT
T ss_pred cc
Confidence 54
No 74
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.28 E-value=4.9e-11 Score=103.51 Aligned_cols=85 Identities=15% Similarity=0.143 Sum_probs=70.6
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|.++|+.++.+ .+....++..+|.++...|+|++|+..|++++.+.. . ...+++.+|.+|
T Consensus 56 ~~~~~A~~~~~~~~~~-------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-----~---~~~~~~~~a~~~ 120 (186)
T 3as5_A 56 GAVDRGTELLERSLAD-------APDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANP-----I---NFNVRFRLGVAL 120 (186)
T ss_dssp TCHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-----T---CHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc-------CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCc-----H---hHHHHHHHHHHH
Confidence 5667777777766654 234578999999999999999999999999998732 2 257899999999
Q ss_pred HcCCCchHHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I~ 305 (478)
...|++++|+.+|++++.+.
T Consensus 121 ~~~~~~~~A~~~~~~~~~~~ 140 (186)
T 3as5_A 121 DNLGRFDEAIDSFKIALGLR 140 (186)
T ss_dssp HHTTCHHHHHHHHHHHHHHC
T ss_pred HHcCcHHHHHHHHHHHHhcC
Confidence 99999999999999998753
No 75
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.26 E-value=8.3e-11 Score=111.91 Aligned_cols=144 Identities=13% Similarity=0.094 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~ 145 (478)
...+..+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+++..
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~------------------------ 219 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVEL--------RPDDAQLWNKLGATLANG------------------------ 219 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHc------------------------
Confidence 456777888888888888888888888887 577778888888888764
Q ss_pred ccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011759 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (478)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~ 225 (478)
++++.|..+|+.++.+.
T Consensus 220 ------------------------------------------------------------~~~~~A~~~~~~a~~~~--- 236 (327)
T 3cv0_A 220 ------------------------------------------------------------NRPQEALDAYNRALDIN--- 236 (327)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHHC---
T ss_pred ------------------------------------------------------------CCHHHHHHHHHHHHHcC---
Confidence 35667777777776542
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCCh----HHHHHHHHHHHHHHcCCCchHHHHHHHHH
Q 011759 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSR----HIAELNFRICLCLEIGSKPQEAIPYCQKA 301 (478)
Q Consensus 226 l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r----~iAea~~~LG~ay~~~~~~eeAl~~~ekA 301 (478)
+....+|..||.++...|+|++|+..|++++.+.....+..+. ....+|++||.+|...|++++|+.+|+++
T Consensus 237 ----~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~ 312 (327)
T 3cv0_A 237 ----PGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVELTYAQN 312 (327)
T ss_dssp ----TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHHHHTTCC
T ss_pred ----CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 3457799999999999999999999999999998764333322 26899999999999999999999999999
Q ss_pred HHHHHHH
Q 011759 302 ISVCKSR 308 (478)
Q Consensus 302 L~I~k~r 308 (478)
+.+++..
T Consensus 313 l~~~~~~ 319 (327)
T 3cv0_A 313 VEPFAKE 319 (327)
T ss_dssp SHHHHHH
T ss_pred HHhcchh
Confidence 9987654
No 76
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.26 E-value=2.5e-11 Score=115.69 Aligned_cols=173 Identities=13% Similarity=0.089 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccC--CCCCCcCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLV--SVPKKEGDSQQGS 143 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg--~~~~~~~e~~~~~ 143 (478)
...++.+|..++..|+|++|+.+|.+++++ .|....+++.+|.+++..++.+...-- .+..
T Consensus 125 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~--------- 187 (330)
T 3hym_B 125 GPAWIAYGHSFAVESEHDQAMAAYFTAAQL--------MKGCHLPMLYIGLEYGLTNNSKLAERFFSQALS--------- 187 (330)
T ss_dssp THHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------TTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHT---------
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------ccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHH---------
Confidence 456889999999999999999999999998 577778899999999988655332100 0000
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
..+... ... -..+...-..++++.|..+|+.++.++.
T Consensus 188 ---------~~~~~~------~~~----------------------------~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 224 (330)
T 3hym_B 188 ---------IAPEDP------FVM----------------------------HEVGVVAFQNGEWKTAEKWFLDALEKIK 224 (330)
T ss_dssp ---------TCTTCH------HHH----------------------------HHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred ---------hCCCCh------HHH----------------------------HHHHHHHHHcccHHHHHHHHHHHHHHhh
Confidence 000000 000 0000011223678899999999988876
Q ss_pred HhcCC--CchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHH
Q 011759 224 KHWGD--SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKA 301 (478)
Q Consensus 224 k~l~~--~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekA 301 (478)
+.... .+..+.+|..||.++...|+|++|+.+|++++.+... .+.+|++||.+|...|++++|+.+|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~--------~~~~~~~la~~~~~~g~~~~A~~~~~~a 296 (330)
T 3hym_B 225 AIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQ--------NASTYSAIGYIHSLMGNFENAVDYFHTA 296 (330)
T ss_dssp TTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT--------CSHHHHHHHHHHHHHTCHHHHHHHHHTT
T ss_pred hccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCcc--------chHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 65432 2456789999999999999999999999999988532 2588999999999999999999999999
Q ss_pred HHHHH
Q 011759 302 ISVCK 306 (478)
Q Consensus 302 L~I~k 306 (478)
+.+..
T Consensus 297 l~~~p 301 (330)
T 3hym_B 297 LGLRR 301 (330)
T ss_dssp TTTCS
T ss_pred HccCC
Confidence 87643
No 77
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.25 E-value=5.9e-11 Score=117.86 Aligned_cols=164 Identities=19% Similarity=0.184 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcc--CCCCCCcCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPL--VSVPKKEGDSQQGS 143 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvL--g~~~~~~~e~~~~~ 143 (478)
...++.+|..+...|+|++|+.+|.+++.+ +|....+|+.+|.+++..++.+..+- -.+..
T Consensus 203 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~--------- 265 (388)
T 1w3b_A 203 LDAYINLGNVLKEARIFDRAVAAYLRALSL--------SPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIE--------- 265 (388)
T ss_dssp HHHHHHHHHHHHTTTCTTHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh---------
Confidence 677899999999999999999999999998 68888999999999998865533210 00000
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
.++... ... -..+......++++.|+++|+.++.+
T Consensus 266 ---------~~p~~~------~~~----------------------------~~l~~~~~~~g~~~~A~~~~~~al~~-- 300 (388)
T 1w3b_A 266 ---------LQPHFP------DAY----------------------------CNLANALKEKGSVAEAEDCYNTALRL-- 300 (388)
T ss_dssp ---------TCSSCH------HHH----------------------------HHHHHHHHHHSCHHHHHHHHHHHHHH--
T ss_pred ---------hCCCCH------HHH----------------------------HHHHHHHHHcCCHHHHHHHHHHHHhh--
Confidence 000000 000 00000011225666777777766654
Q ss_pred HhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Q 011759 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (478)
Q Consensus 224 k~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~ 303 (478)
.+..+.+|..||.++...|+|++|+..|++++++. |..+.+|++||.+|...|++++|+.+|++++.
T Consensus 301 -----~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--------p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 367 (388)
T 1w3b_A 301 -----CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF--------PEFAAAHSNLASVLQQQGKLQEALMHYKEAIR 367 (388)
T ss_dssp -----CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSC--------TTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHT
T ss_pred -----CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 34557899999999999999999999999998753 33468999999999999999999999999986
Q ss_pred H
Q 011759 304 V 304 (478)
Q Consensus 304 I 304 (478)
+
T Consensus 368 ~ 368 (388)
T 1w3b_A 368 I 368 (388)
T ss_dssp T
T ss_pred h
Confidence 5
No 78
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.25 E-value=1.8e-10 Score=105.38 Aligned_cols=165 Identities=13% Similarity=0.115 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCc--cCCCCCCcCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGS 143 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdv--Lg~~~~~~~e~~~~~ 143 (478)
...+..+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+++..++.+... +-...+
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~--------- 119 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALEL--------DSSAATAYYGAGNVYVVKEMYKEAKDMFEKALR--------- 119 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCcchHHHHHHHHHHHHhccHHHHHHHHHHHHH---------
Confidence 678889999999999999999999999998 6778899999999999876543221 000000
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
..+... ... -..+...-..++++.|..+|+.++.+
T Consensus 120 ---------~~~~~~------~~~----------------------------~~~a~~~~~~~~~~~A~~~~~~~~~~-- 154 (243)
T 2q7f_A 120 ---------AGMENG------DLF----------------------------YMLGTVLVKLEQPKLALPYLQRAVEL-- 154 (243)
T ss_dssp ---------HTCCSH------HHH----------------------------HHHHHHHHHTSCHHHHHHHHHHHHHH--
T ss_pred ---------hCCCCH------HHH----------------------------HHHHHHHHHhccHHHHHHHHHHHHHh--
Confidence 000000 000 00000011235666777666666554
Q ss_pred HhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Q 011759 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (478)
Q Consensus 224 k~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~ 303 (478)
.+....++..||.++...|+|++|+..|++++.+.. + .+.+++.||.+|...|++++|+.+|++++.
T Consensus 155 -----~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-----~---~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 221 (243)
T 2q7f_A 155 -----NENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDP-----G---HADAFYNAGVTYAYKENREKALEMLDKAID 221 (243)
T ss_dssp -----CTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCT-----T---CHHHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred -----CCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc-----c---cHHHHHHHHHHHHHccCHHHHHHHHHHHHc
Confidence 234567899999999999999999999999988732 2 257899999999999999999999999987
Q ss_pred HH
Q 011759 304 VC 305 (478)
Q Consensus 304 I~ 305 (478)
+.
T Consensus 222 ~~ 223 (243)
T 2q7f_A 222 IQ 223 (243)
T ss_dssp HC
T ss_pred cC
Confidence 64
No 79
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.25 E-value=4.7e-11 Score=105.55 Aligned_cols=86 Identities=10% Similarity=0.072 Sum_probs=72.7
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|..+|+.++.+ .+....+|++||.++...|+|++|+.+|++++.+... + ..+|++||.+|
T Consensus 35 g~~~~A~~~~~~al~~-------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-----~---~~~~~~lg~~~ 99 (148)
T 2vgx_A 35 GXYEDAHXVFQALCVL-------DHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIX-----E---PRFPFHAAECL 99 (148)
T ss_dssp TCHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-----C---THHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHc-------CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC-----C---chHHHHHHHHH
Confidence 4566777777776654 3456889999999999999999999999999998533 3 37899999999
Q ss_pred HcCCCchHHHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISVCK 306 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I~k 306 (478)
...|++++|+.+|++++.+..
T Consensus 100 ~~~g~~~~A~~~~~~al~~~p 120 (148)
T 2vgx_A 100 LQXGELAEAESGLFLAQELIA 120 (148)
T ss_dssp HHTTCHHHHHHHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHHHHHHCc
Confidence 999999999999999998753
No 80
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.25 E-value=3.4e-11 Score=123.98 Aligned_cols=135 Identities=7% Similarity=-0.046 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCC
Q 011759 66 ADELMEKGTNALKESD-YGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (478)
Q Consensus 66 A~~L~~~G~~~~~~gd-y~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~ 144 (478)
+..++.+|..++.+|+ |++|+.+|.+|+++ +|.+..+|+++|.+|..+++
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l--------~P~~~~a~~~~g~~~~~~g~--------------------- 181 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAIIEE--------QPKNYQVWHHRRVLVEWLRD--------------------- 181 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTC---------------------
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHccC---------------------
Confidence 5678899999999997 99999999999998 89999999999999998722
Q ss_pred CccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011759 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (478)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek 224 (478)
++.|...|+.|+.+
T Consensus 182 ---------------------------------------------------------------~~eAl~~~~kal~l--- 195 (382)
T 2h6f_A 182 ---------------------------------------------------------------PSQELEFIADILNQ--- 195 (382)
T ss_dssp ---------------------------------------------------------------CTTHHHHHHHHHHH---
T ss_pred ---------------------------------------------------------------HHHHHHHHHHHHHh---
Confidence 22355556666544
Q ss_pred hcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHc-CCCchHH-----HHHH
Q 011759 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI-GSKPQEA-----IPYC 298 (478)
Q Consensus 225 ~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~-~~~~eeA-----l~~~ 298 (478)
.++...+|++||.++..+|+|++|+.+|+++|++.... +.+|+++|.+|.. .+.+++| +.+|
T Consensus 196 ----dP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~--------~~a~~~lg~~l~~l~~~~~eA~~~~el~~~ 263 (382)
T 2h6f_A 196 ----DAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRN--------NSVWNQRYFVISNTTGYNDRAVLEREVQYT 263 (382)
T ss_dssp ----CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTC--------HHHHHHHHHHHHHTTCSCSHHHHHHHHHHH
T ss_pred ----CccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHHhcCcchHHHHHHHHHHH
Confidence 45678899999999999999999999999999986543 5899999999999 5565888 5999
Q ss_pred HHHHHHHHH
Q 011759 299 QKAISVCKS 307 (478)
Q Consensus 299 ekAL~I~k~ 307 (478)
++||.+-..
T Consensus 264 ~~Al~l~P~ 272 (382)
T 2h6f_A 264 LEMIKLVPH 272 (382)
T ss_dssp HHHHHHSTT
T ss_pred HHHHHHCCC
Confidence 999987543
No 81
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.24 E-value=1.6e-10 Score=107.06 Aligned_cols=134 Identities=16% Similarity=0.102 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~ 145 (478)
+..+..+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+++..
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~la~~~~~~------------------------ 118 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKALAS--------DSRNARVLNNYGGFLYEQ------------------------ 118 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CcCcHHHHHHHHHHHHHH------------------------
Confidence 556788999999999999999999999998 577889999999999865
Q ss_pred ccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011759 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (478)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~ 225 (478)
++++.|.++|+.++.
T Consensus 119 ------------------------------------------------------------g~~~~A~~~~~~~~~----- 133 (252)
T 2ho1_A 119 ------------------------------------------------------------KRYEEAYQRLLEASQ----- 133 (252)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHTT-----
T ss_pred ------------------------------------------------------------hHHHHHHHHHHHHHh-----
Confidence 345556655555543
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 226 l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
....+....++..||.+++..|+|++|+..|++++.+.. .+ ..+++.||.+|...+++++|+.+|++++.+
T Consensus 134 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~-----~~---~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 204 (252)
T 2ho1_A 134 DTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNR-----NQ---PSVALEMADLLYKEREYVPARQYYDLFAQG 204 (252)
T ss_dssp CTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS-----CC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred CccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCc-----cc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 113456788888999999999999999999998887642 22 577888999999999999999988887754
No 82
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.24 E-value=1.1e-10 Score=102.82 Aligned_cols=114 Identities=16% Similarity=0.130 Sum_probs=93.1
Q ss_pred hhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCC----------ChhHHHHHHHHHHHHHhhhhccCCcc
Q 011759 60 EKTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGEL----------ALECVNAYYQYGRALLYKAQEEADPL 129 (478)
Q Consensus 60 ~~~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~----------~pe~A~~y~~YG~ALl~~a~~esdvL 129 (478)
+..++.+..|..+|..++..|+|++|+.+|.+|++++....... .|..+.+|+++|.+++.+
T Consensus 5 ~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~-------- 76 (162)
T 3rkv_A 5 DDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNI-------- 76 (162)
T ss_dssp ---CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhc--------
Confidence 34567899999999999999999999999999999976554311 567788999999999876
Q ss_pred CCCCCCcCCCCCCCCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHH
Q 011759 130 VSVPKKEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLD 209 (478)
Q Consensus 130 g~~~~~~~e~~~~~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle 209 (478)
++++
T Consensus 77 ----------------------------------------------------------------------------~~~~ 80 (162)
T 3rkv_A 77 ----------------------------------------------------------------------------GDLH 80 (162)
T ss_dssp ----------------------------------------------------------------------------TCHH
T ss_pred ----------------------------------------------------------------------------CcHH
Confidence 3566
Q ss_pred HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 011759 210 LAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILE 264 (478)
Q Consensus 210 ~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~ 264 (478)
.|...++.|+.+ .+..+.+|+.+|.++..+|+|++|+.+|+++|.+..
T Consensus 81 ~A~~~~~~al~~-------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p 128 (162)
T 3rkv_A 81 EAEETSSEVLKR-------EETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHP 128 (162)
T ss_dssp HHHHHHHHHHHH-------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHhc-------CCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCC
Confidence 777777777765 345688999999999999999999999999999854
No 83
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.24 E-value=2.8e-10 Score=104.07 Aligned_cols=169 Identities=19% Similarity=0.176 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCC
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~ 143 (478)
-.+..++.+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+++..++.+..+--. .
T Consensus 21 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~--~--------- 81 (243)
T 2q7f_A 21 MASMTGGQQMGRGSEFGDYEKAAEAFTKAIEE--------NKEDAIPYINFANLLSSVNELERALAFY--D--------- 81 (243)
T ss_dssp ---------------------CCTTHHHHHTT--------CTTCHHHHHHHHHHHHHTTCHHHHHHHH--H---------
T ss_pred hHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHh--------CcccHHHHHHHHHHHHHcCCHHHHHHHH--H---------
Confidence 34788999999999999999999999999985 6788899999999999876543221000 0
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
.... ..+... .. . -..+......++++.|.++|+.++.+.
T Consensus 82 ---~~~~--~~~~~~------~~--------~--------------------~~la~~~~~~~~~~~A~~~~~~~~~~~- 121 (243)
T 2q7f_A 82 ---KALE--LDSSAA------TA--------Y--------------------YGAGNVYVVKEMYKEAKDMFEKALRAG- 121 (243)
T ss_dssp ---HHHH--HCTTCH------HH--------H--------------------HHHHHHHHHTTCHHHHHHHHHHHHHHT-
T ss_pred ---HHHH--cCCcch------HH--------H--------------------HHHHHHHHHhccHHHHHHHHHHHHHhC-
Confidence 0000 000000 00 0 000000012355666666666665542
Q ss_pred HhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Q 011759 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (478)
Q Consensus 224 k~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~ 303 (478)
+....++..+|.+++..|+|++|+..|++++.+... ...+++.+|.+|...|++++|+.+|++++.
T Consensus 122 ------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~ 187 (243)
T 2q7f_A 122 ------MENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEN--------DTEARFQFGMCLANEGMLDEALSQFAAVTE 187 (243)
T ss_dssp ------CCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT--------CHHHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred ------CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc--------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 234678999999999999999999999999887432 246889999999999999999999999887
Q ss_pred HH
Q 011759 304 VC 305 (478)
Q Consensus 304 I~ 305 (478)
+.
T Consensus 188 ~~ 189 (243)
T 2q7f_A 188 QD 189 (243)
T ss_dssp HC
T ss_pred hC
Confidence 63
No 84
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.23 E-value=3e-10 Score=112.31 Aligned_cols=153 Identities=7% Similarity=0.007 Sum_probs=128.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCC
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~ 143 (478)
..+..++.+|..++..|+|++|..+|.+|+++... .|. ....+.+++++|.+++..
T Consensus 51 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~-~~~~~~~~~~la~~~~~~---------------------- 106 (373)
T 1hz4_A 51 SRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQ-HDV-WHYALWSLIQQSEILFAQ---------------------- 106 (373)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-TTC-HHHHHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHh-cCc-HHHHHHHHHHHHHHHHHC----------------------
Confidence 45677889999999999999999999999998655 332 234567788888888764
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
++++.|...++.++.++.
T Consensus 107 --------------------------------------------------------------G~~~~A~~~~~~al~~~~ 124 (373)
T 1hz4_A 107 --------------------------------------------------------------GFLQTAWETQEKAFQLIN 124 (373)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------CCHHHHHHHHHHHHHHHH
Confidence 467889999999999998
Q ss_pred HhcCC-CchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHH
Q 011759 224 KHWGD-SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (478)
Q Consensus 224 k~l~~-~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL 302 (478)
+..+. ++..+.+|.+||.++...|+|++|+.+|++++.+.+... ++..+.+|++||.+|...|++++|+.+|++++
T Consensus 125 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~---~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~ 201 (373)
T 1hz4_A 125 EQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQ---PQQQLQCLAMLIQCSLARGDLDNARSQLNRLE 201 (373)
T ss_dssp HTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSC---GGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccC---cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 76543 367889999999999999999999999999999987653 22356899999999999999999999999999
Q ss_pred HHH
Q 011759 303 SVC 305 (478)
Q Consensus 303 ~I~ 305 (478)
.+.
T Consensus 202 ~~~ 204 (373)
T 1hz4_A 202 NLL 204 (373)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 85
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.23 E-value=1.7e-10 Score=101.92 Aligned_cols=104 Identities=17% Similarity=0.182 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCC
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~ 143 (478)
..+..++.+|..++..|+|++|+.+|.+++++ .|..+.+|+++|.+|+.+
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~---------------------- 58 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSI--------APANPIYLSNRAAAYSAS---------------------- 58 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHT----------------------
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCcCHHHHHHHHHHHHHc----------------------
Confidence 45889999999999999999999999999998 688899999999999875
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
++++.|...|+.|+.+.
T Consensus 59 --------------------------------------------------------------g~~~~A~~~~~~al~~~- 75 (164)
T 3sz7_A 59 --------------------------------------------------------------GQHEKAAEDAELATVVD- 75 (164)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHC-
T ss_pred --------------------------------------------------------------cCHHHHHHHHHHHHHhC-
Confidence 35777888888887662
Q ss_pred HhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 011759 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERM 266 (478)
Q Consensus 224 k~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~l 266 (478)
+....+|++||.++..+|+|++|+.+|+++|.+....
T Consensus 76 ------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 112 (164)
T 3sz7_A 76 ------PKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNG 112 (164)
T ss_dssp ------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSS
T ss_pred ------CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc
Confidence 4558899999999999999999999999999987543
No 86
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.21 E-value=3.3e-10 Score=101.86 Aligned_cols=167 Identities=14% Similarity=0.028 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhh-hhccCCc--cCCCCCCcCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYK-AQEEADP--LVSVPKKEGDSQQG 142 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~-a~~esdv--Lg~~~~~~~e~~~~ 142 (478)
...+..+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+++.. ++.+... +-....
T Consensus 42 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~-------- 105 (225)
T 2vq2_A 42 ELAWLVRAEIYQYLKVNDKAQESFRQALSI--------KPDSAEINNNYGWFLCGRLNRPAESMAYFDKALA-------- 105 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHT--------
T ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHc--------
Confidence 456788999999999999999999999997 577888999999999987 6553321 000000
Q ss_pred CCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011759 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 222 (478)
Q Consensus 143 ~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ 222 (478)
.+.. +.. . .. - -..+......++++.|..+|+.++.+
T Consensus 106 -----------~~~~------~~~--------~-~~----~------------~~l~~~~~~~~~~~~A~~~~~~~~~~- 142 (225)
T 2vq2_A 106 -----------DPTY------PTP--------Y-IA----N------------LNKGICSAKQGQFGLAEAYLKRSLAA- 142 (225)
T ss_dssp -----------STTC------SCH--------H-HH----H------------HHHHHHHHHTTCHHHHHHHHHHHHHH-
T ss_pred -----------CcCC------cch--------H-HH----H------------HHHHHHHHHcCCHHHHHHHHHHHHHh-
Confidence 0000 000 0 00 0 00000011235666666666665543
Q ss_pred HHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHH
Q 011759 223 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (478)
Q Consensus 223 ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL 302 (478)
.+....++..||.++...|+|++|+..|++++.+.. ..+ ...++.++.+|...+++++|..++++++
T Consensus 143 ------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 209 (225)
T 2vq2_A 143 ------QPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVE----VLQ---ADDLLLGWKIAKALGNAQAAYEYEAQLQ 209 (225)
T ss_dssp ------STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC----SCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ------CCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC----CCC---HHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 344578999999999999999999999999998753 122 3568899999999999999999988876
Q ss_pred HH
Q 011759 303 SV 304 (478)
Q Consensus 303 ~I 304 (478)
.+
T Consensus 210 ~~ 211 (225)
T 2vq2_A 210 AN 211 (225)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 87
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.21 E-value=1.8e-10 Score=122.09 Aligned_cols=133 Identities=14% Similarity=0.039 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~ 145 (478)
+..+..+|..++..|+|++|+.+|.+|+++ +|..+.+|+++|.+|+.+
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~------------------------ 70 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLAL--------HPGHPEAVARLGRVRWTQ------------------------ 70 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTT--------STTCHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHC------------------------
Confidence 567899999999999999999999999997 788899999999999865
Q ss_pred ccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011759 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (478)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~ 225 (478)
++++.|.+.|+.|+.+
T Consensus 71 ------------------------------------------------------------g~~~~A~~~~~~al~~---- 86 (568)
T 2vsy_A 71 ------------------------------------------------------------QRHAEAAVLLQQASDA---- 86 (568)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHH----
T ss_pred ------------------------------------------------------------CCHHHHHHHHHHHHhc----
Confidence 3567788888888765
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcC---CCchHHHHHHHHHH
Q 011759 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIG---SKPQEAIPYCQKAI 302 (478)
Q Consensus 226 l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~---~~~eeAl~~~ekAL 302 (478)
.+....+|.+||.++...|+|++|+..|++++++... ...+|++||.+|... +++++|+.+|++++
T Consensus 87 ---~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~--------~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al 155 (568)
T 2vsy_A 87 ---APEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPE--------EPYITAQLLNWRRRLCDWRALDVLSAQVRAAV 155 (568)
T ss_dssp ---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--------CHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHhhccccHHHHHHHHHHHH
Confidence 2345789999999999999999999999999998432 258999999999999 99999999999999
Q ss_pred HHH
Q 011759 303 SVC 305 (478)
Q Consensus 303 ~I~ 305 (478)
++.
T Consensus 156 ~~~ 158 (568)
T 2vsy_A 156 AQG 158 (568)
T ss_dssp HHT
T ss_pred hcC
Confidence 875
No 88
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.19 E-value=8.6e-11 Score=119.30 Aligned_cols=143 Identities=11% Similarity=-0.003 Sum_probs=118.6
Q ss_pred HcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCCccccccccCCCC
Q 011759 78 KESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNAVNGES 157 (478)
Q Consensus 78 ~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~de~~~~~~~~e~ 157 (478)
..++++.++..+.+.+....+.. .++..+.+|+++|.+++.+
T Consensus 23 ~l~~~~~~l~~~e~~~~~~~~~~--~~~~~a~~yn~Lg~~~~~~------------------------------------ 64 (472)
T 4g1t_A 23 NLMEGENSLDDFEDKVFYRTEFQ--NREFKATMCNLLAYLKHLK------------------------------------ 64 (472)
T ss_dssp CTTTTCCCHHHHHHHHHHHTTSC--C---CCHHHHHHHHHHHHT------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHhC--CChhHHHHHHHHHHHHHHC------------------------------------
Confidence 35677788888888777654433 3555688999999999875
Q ss_pred CccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcC--CCchHHHH
Q 011759 158 STASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWG--DSMEKVDI 235 (478)
Q Consensus 158 a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~l~--~~~~~Ad~ 235 (478)
++++.|.++|+.|+.|+.+... .++..+.+
T Consensus 65 ------------------------------------------------G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~ 96 (472)
T 4g1t_A 65 ------------------------------------------------GQNEAALECLRKAEELIQQEHADQAEIRSLVT 96 (472)
T ss_dssp ------------------------------------------------TCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHH
T ss_pred ------------------------------------------------CCHHHHHHHHHHHHHHHHhcCccccchHHHHH
Confidence 4577899999999999887654 35778999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcC--CCchHHHHHHHHHHHHHH
Q 011759 236 LSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIG--SKPQEAIPYCQKAISVCK 306 (478)
Q Consensus 236 ~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~--~~~eeAl~~~ekAL~I~k 306 (478)
|.+||.+|..+|+|++|+.+|++++.|.+.+.++.++..+.+|+++|.++... ++|++|+.+|++||.+..
T Consensus 97 ~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p 169 (472)
T 4g1t_A 97 WGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKP 169 (472)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999998989999999999988764 469999999999998743
No 89
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.18 E-value=6.3e-10 Score=106.68 Aligned_cols=136 Identities=19% Similarity=0.234 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~ 145 (478)
+..++.+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+++..
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~--------~p~~~~~~~~~a~~~~~~------------------------ 50 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDG--------DPDNYIAYYRRATVFLAM------------------------ 50 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHH------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CcccHHHHHHHHHHHHHc------------------------
Confidence 678999999999999999999999999997 688889999999999876
Q ss_pred ccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011759 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (478)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~ 225 (478)
++++.|...|+.++.+
T Consensus 51 ------------------------------------------------------------~~~~~A~~~~~~~~~~---- 66 (359)
T 3ieg_A 51 ------------------------------------------------------------GKSKAALPDLTKVIAL---- 66 (359)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHH----
T ss_pred ------------------------------------------------------------cCHHHHHHHHHHHHHh----
Confidence 3567788888777765
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHH------------HHHHHHcCCCchH
Q 011759 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFR------------ICLCLEIGSKPQE 293 (478)
Q Consensus 226 l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~------------LG~ay~~~~~~ee 293 (478)
.+....+|..||.++...|+|++|+..|++++.+.. .......+++. +|.+|...+++++
T Consensus 67 ---~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~ 138 (359)
T 3ieg_A 67 ---KMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNP-----SEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTA 138 (359)
T ss_dssp ---CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred ---CCCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCC-----cccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHH
Confidence 234568999999999999999999999999987643 00022344444 4899999999999
Q ss_pred HHHHHHHHHHHH
Q 011759 294 AIPYCQKAISVC 305 (478)
Q Consensus 294 Al~~~ekAL~I~ 305 (478)
|+.+|++++.+.
T Consensus 139 A~~~~~~~~~~~ 150 (359)
T 3ieg_A 139 AITFLDKILEVC 150 (359)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 999999998764
No 90
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.18 E-value=4.3e-10 Score=115.31 Aligned_cols=58 Identities=14% Similarity=0.250 Sum_probs=50.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhc
Q 011759 59 REKTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQE 124 (478)
Q Consensus 59 ~~~~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~ 124 (478)
+......+..|+.+|..++..|+|++|+.+|.+++++ +|....+|+.+|.+++.+++.
T Consensus 18 ~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~g~~ 75 (537)
T 3fp2_A 18 PSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIEL--------DPNEPVFYSNISACYISTGDL 75 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCH
T ss_pred cchhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh--------CCCCcHHHHHHHHHHHHcCCH
Confidence 3344567999999999999999999999999999998 688899999999999987544
No 91
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.18 E-value=8.4e-10 Score=90.35 Aligned_cols=124 Identities=13% Similarity=0.101 Sum_probs=103.8
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCC
Q 011759 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQ 141 (478)
Q Consensus 62 ~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~ 141 (478)
....+..++.+|..++..|+|++|+.+|.+++.+ +|..+.+|+.+|.+++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~a~~~~~~-------------------- 59 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIEL--------NPANAVYFCNRAAAYSKL-------------------- 59 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT--------------------
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHh--------------------
Confidence 3456889999999999999999999999999997 677789999999999865
Q ss_pred CCCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHH
Q 011759 142 GSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAI 221 (478)
Q Consensus 142 ~~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I 221 (478)
++++.|.++++.++.+
T Consensus 60 ----------------------------------------------------------------~~~~~A~~~~~~~~~~ 75 (131)
T 2vyi_A 60 ----------------------------------------------------------------GNYAGAVQDCERAICI 75 (131)
T ss_dssp ----------------------------------------------------------------TCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------------------hchHHHHHHHHHHHhc
Confidence 3466777777777664
Q ss_pred HHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCch
Q 011759 222 AEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQ 292 (478)
Q Consensus 222 ~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~e 292 (478)
.+....+|..+|.++...|+|++|+..|++++.+.. ++ ..+++.||.+|...++++
T Consensus 76 -------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p-----~~---~~~~~~l~~~~~~~~~~~ 131 (131)
T 2vyi_A 76 -------DPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDP-----DN---ETYKSNLKIAELKLREAP 131 (131)
T ss_dssp -------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-----TC---HHHHHHHHHHHHHHTTCC
T ss_pred -------CccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCc-----cc---hHHHHHHHHHHHHHhcCC
Confidence 234478999999999999999999999999998843 22 478999999999888763
No 92
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.18 E-value=3.1e-10 Score=104.20 Aligned_cols=98 Identities=19% Similarity=0.124 Sum_probs=79.1
Q ss_pred ChHHHHHHHHHHHHHHHHHhcC-----CCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHH--
Q 011759 206 SDLDLAWKMLDVARAIAEKHWG-----DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELN-- 278 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~-----~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~-- 278 (478)
++|+.|.+.|+.|+.+--.... ..+..+.+|.++|.++..+|+|++|+.+|.+||+|+.+.. +-+|.-+.+|
T Consensus 25 g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~-e~~pd~~~A~~~ 103 (159)
T 2hr2_A 25 GEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRG-ELNQDEGKLWIS 103 (159)
T ss_dssp TCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHC-CTTSTHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccc-cCCCchHHHHHH
Confidence 4677888888888877544211 1123466999999999999999999999999999955443 2344567888
Q ss_pred --HHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 279 --FRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 279 --~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
|++|.+|..+|+|++|+.+|++||++
T Consensus 104 ~~~~rG~aL~~lgr~eEAl~~y~kAlel 131 (159)
T 2hr2_A 104 AVYSRALALDGLGRGAEAMPEFKKVVEM 131 (159)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999987
No 93
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.18 E-value=2.2e-11 Score=133.57 Aligned_cols=133 Identities=14% Similarity=0.011 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCCc
Q 011759 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKD 146 (478)
Q Consensus 67 ~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~d 146 (478)
..++.+|..++.+|+|++|+.+|.+++++ +|..+.+|+++|.+|+.+
T Consensus 434 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~------------------------- 480 (681)
T 2pzi_A 434 ELPLMEVRALLDLGDVAKATRKLDDLAER--------VGWRWRLVWYRAVAELLT------------------------- 480 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------HCCCHHHHHHHHHHHHHH-------------------------
T ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHhcc--------CcchHHHHHHHHHHHHHc-------------------------
Confidence 46888999999999999999999999998 688999999999999976
Q ss_pred cccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHhc
Q 011759 147 DSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHW 226 (478)
Q Consensus 147 e~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~l 226 (478)
++++.|.+.|+.|+.+
T Consensus 481 -----------------------------------------------------------g~~~~A~~~~~~al~l----- 496 (681)
T 2pzi_A 481 -----------------------------------------------------------GDYDSATKHFTEVLDT----- 496 (681)
T ss_dssp -----------------------------------------------------------TCHHHHHHHHHHHHHH-----
T ss_pred -----------------------------------------------------------CCHHHHHHHHHHHHHh-----
Confidence 3567777777777765
Q ss_pred CCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH
Q 011759 227 GDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCK 306 (478)
Q Consensus 227 ~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k 306 (478)
.+..+.+|.+||.++..+|+|++ +.+|+++|++.... +.+|++||.+|..+|++++|+.+|++|+++-.
T Consensus 497 --~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~--------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P 565 (681)
T 2pzi_A 497 --FPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGV--------ISAAFGLARARSAEGDRVGAVRTLDEVPPTSR 565 (681)
T ss_dssp --STTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTC--------HHHHHHHHHHHHHTTCHHHHHHHHHTSCTTST
T ss_pred --CCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCch--------HHHHHHHHHHHHHcCCHHHHHHHHHhhcccCc
Confidence 34557899999999999999999 99999999875432 57999999999999999999999999987644
Q ss_pred H
Q 011759 307 S 307 (478)
Q Consensus 307 ~ 307 (478)
.
T Consensus 566 ~ 566 (681)
T 2pzi_A 566 H 566 (681)
T ss_dssp T
T ss_pred c
Confidence 3
No 94
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.18 E-value=7e-10 Score=105.49 Aligned_cols=87 Identities=15% Similarity=0.247 Sum_probs=68.2
Q ss_pred cChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 011759 205 ESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLC 284 (478)
Q Consensus 205 ~ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~a 284 (478)
.++++.|..+|+.++.+ .+....++..||.++...|+|++|+..|++++.+.. ....+++++|.+
T Consensus 151 ~~~~~~A~~~~~~~~~~-------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~--------~~~~~~~~l~~~ 215 (327)
T 3cv0_A 151 PNEYRECRTLLHAALEM-------NPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRP--------DDAQLWNKLGAT 215 (327)
T ss_dssp HHHHHHHHHHHHHHHHH-------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHhh-------CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC--------CcHHHHHHHHHH
Confidence 35666666666666543 234578899999999999999999999999988732 225789999999
Q ss_pred HHcCCCchHHHHHHHHHHHHHH
Q 011759 285 LEIGSKPQEAIPYCQKAISVCK 306 (478)
Q Consensus 285 y~~~~~~eeAl~~~ekAL~I~k 306 (478)
|...|++++|+.+|++++.+..
T Consensus 216 ~~~~~~~~~A~~~~~~a~~~~~ 237 (327)
T 3cv0_A 216 LANGNRPQEALDAYNRALDINP 237 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHcCCHHHHHHHHHHHHHcCC
Confidence 9999999999999999987643
No 95
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.17 E-value=2.3e-10 Score=104.12 Aligned_cols=138 Identities=16% Similarity=0.152 Sum_probs=88.6
Q ss_pred chhhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCC---------hhHHHHHHHHHHHHHhhhhccCCc
Q 011759 58 EREKTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELA---------LECVNAYYQYGRALLYKAQEEADP 128 (478)
Q Consensus 58 ~~~~~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~---------pe~A~~y~~YG~ALl~~a~~esdv 128 (478)
........+..++.+|..++..|+|++|+.+|.+|+++.-.. .+.. .-...+|+++|.+++.+
T Consensus 30 ~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~~~~~~~~~~la~~~~~~------- 101 (198)
T 2fbn_A 30 TDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHT-EEWDDQILLDKKKNIEISCNLNLATCYNKN------- 101 (198)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTC-TTCCCHHHHHHHHHHHHHHHHHHHHHHHHT-------
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcc-cccchhhHHHHHHHHHHHHHHHHHHHHHHh-------
Confidence 344567789999999999999999999999999999873110 0000 00136666777766653
Q ss_pred cCCCCCCcCCCCCCCCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChH
Q 011759 129 LVSVPKKEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDL 208 (478)
Q Consensus 129 Lg~~~~~~~e~~~~~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddl 208 (478)
+++
T Consensus 102 -----------------------------------------------------------------------------~~~ 104 (198)
T 2fbn_A 102 -----------------------------------------------------------------------------KDY 104 (198)
T ss_dssp -----------------------------------------------------------------------------TCH
T ss_pred -----------------------------------------------------------------------------cCH
Confidence 245
Q ss_pred HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcC
Q 011759 209 DLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIG 288 (478)
Q Consensus 209 e~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~ 288 (478)
+.|+..++.++.+ .+....+|..+|.++..+|+|++|+.+|++++.+.. ++ ..++.+|+.++...
T Consensus 105 ~~A~~~~~~al~~-------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p-----~~---~~~~~~l~~~~~~~ 169 (198)
T 2fbn_A 105 PKAIDHASKVLKI-------DKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNP-----NN---LDIRNSYELCVNKL 169 (198)
T ss_dssp HHHHHHHHHHHHH-------STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST-----TC---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-------CcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCC-----Cc---HHHHHHHHHHHHHH
Confidence 5566666666554 223456677777777777777777777777776632 12 35666677776666
Q ss_pred CCchHHH
Q 011759 289 SKPQEAI 295 (478)
Q Consensus 289 ~~~eeAl 295 (478)
+++.++.
T Consensus 170 ~~~~~~~ 176 (198)
T 2fbn_A 170 KEARKKD 176 (198)
T ss_dssp HHHHC--
T ss_pred HHHHHHH
Confidence 6655554
No 96
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.17 E-value=2.2e-10 Score=99.28 Aligned_cols=86 Identities=13% Similarity=0.053 Sum_probs=72.7
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|..+|+.++.+ .+....+|..||.++...|+|++|+.+|++++.+.. ++ ..+|++||.+|
T Consensus 32 g~~~~A~~~~~~al~~-------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p-----~~---~~~~~~lg~~~ 96 (142)
T 2xcb_A 32 GKWDDAQKIFQALCML-------DHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI-----NE---PRFPFHAAECH 96 (142)
T ss_dssp TCHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC---THHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHh-------CCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC-----CC---cHHHHHHHHHH
Confidence 4566777777766643 345678999999999999999999999999999853 33 37899999999
Q ss_pred HcCCCchHHHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISVCK 306 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I~k 306 (478)
...|++++|+.+|++++.+..
T Consensus 97 ~~~g~~~~A~~~~~~al~~~p 117 (142)
T 2xcb_A 97 LQLGDLDGAESGFYSARALAA 117 (142)
T ss_dssp HHTTCHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCC
Confidence 999999999999999999865
No 97
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.17 E-value=8.6e-10 Score=93.08 Aligned_cols=99 Identities=17% Similarity=0.162 Sum_probs=87.1
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|..+++.++.++.+.. .....+.++..||.++...|+|++|+.+|++++.+.+.. .+.+..+.++++||.+|
T Consensus 23 ~~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~ 99 (164)
T 3ro3_A 23 GNFRDAVIAHEQRLLIAKEFG-DKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTY 99 (164)
T ss_dssp TCHHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHhC-CchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CCcHHHHHHHHHHHHHH
Confidence 457889999999999988753 345678999999999999999999999999999999876 35566799999999999
Q ss_pred HcCCCchHHHHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISVCKS 307 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I~k~ 307 (478)
...+++++|+.+|++++.+.+.
T Consensus 100 ~~~~~~~~A~~~~~~a~~~~~~ 121 (164)
T 3ro3_A 100 TLLQDYEKAIDYHLKHLAIAQE 121 (164)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988543
No 98
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.16 E-value=7.5e-10 Score=103.28 Aligned_cols=65 Identities=12% Similarity=-0.011 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHH
Q 011759 233 VDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (478)
Q Consensus 233 Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL 302 (478)
+..+..+|.+++..|+|++|+..|++++++. |+++...+++++||.+|..+|++++|+.+|++++
T Consensus 147 ~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~-----p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~ 211 (225)
T 2yhc_A 147 AKYEYSVAEYYTERGAWVAVVNRVEGMLRDY-----PDTQATRDALPLMENAYRQMQMNAQAEKVAKIIA 211 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS-----TTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcHHHHHHHHHHHHHHC-----cCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 4455789999999999999999999999875 3567788999999999999999999999997655
No 99
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.16 E-value=2.4e-10 Score=100.87 Aligned_cols=119 Identities=10% Similarity=0.042 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCC
Q 011759 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (478)
Q Consensus 65 ~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~ 144 (478)
....++.+|..++..|+|++|+.+|.+|+++ +|..+.+|+++|.+++..
T Consensus 30 ~~~~~~~la~~y~~~~~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~----------------------- 78 (150)
T 4ga2_A 30 KSIKGFYFAKLYYEAKEYDLAKKYICTYINV--------QERDPKAHRFLGLLYELE----------------------- 78 (150)
T ss_dssp HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT-----------------------
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHc-----------------------
Confidence 4566789999999999999999999999999 799999999999999875
Q ss_pred CccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011759 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (478)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek 224 (478)
++++.|...|+.|+.+
T Consensus 79 -------------------------------------------------------------~~~~~A~~~~~~al~~--- 94 (150)
T 4ga2_A 79 -------------------------------------------------------------ENTDKAVECYRRSVEL--- 94 (150)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHH---
T ss_pred -------------------------------------------------------------CchHHHHHHHHHHHHh---
Confidence 3566777777777765
Q ss_pred hcCCCchHHHHHHHHHHHHHhcCCHHHHHHHH-HHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCC
Q 011759 225 HWGDSMEKVDILSALAEVALEREDIETSLSDY-QKALTILERMVEPDSRHIAELNFRICLCLEIGSK 290 (478)
Q Consensus 225 ~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy-~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~ 290 (478)
.+...++|.+||.++...++|++|+..| ++|+++.+ ++ +.+|..++.++...|+
T Consensus 95 ----~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P-----~~---~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 95 ----NPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFP-----GS---PAVYKLKEQLLDCEGE 149 (150)
T ss_dssp ----CTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHST-----TC---HHHHHHHHHHHHTCCC
T ss_pred ----CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCc-----CC---HHHHHHHHHHHHHhCc
Confidence 3566889999999999999999888765 89998754 44 3678888888887775
No 100
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.16 E-value=7.2e-10 Score=115.70 Aligned_cols=172 Identities=12% Similarity=0.078 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCc--cCCCCCCcCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGS 143 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdv--Lg~~~~~~~e~~~~~ 143 (478)
...+..+|..+...|+|++|+.+|.+++++ .|....+|+.+|.++...++.+... |.....
T Consensus 407 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~--------- 469 (597)
T 2xpi_A 407 GPAWIGFAHSFAIEGEHDQAISAYTTAARL--------FQGTHLPYLFLGMQHMQLGNILLANEYLQSSYA--------- 469 (597)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--------TTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CccchHHHHHHHHHHHHcCCHHHHHHHHHHHHH---------
Confidence 567889999999999999999999999976 5677789999999999886553321 100000
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
..+... ... -..+...-..++++.|+++|+.++.++.
T Consensus 470 ---------~~~~~~------~~~----------------------------~~l~~~~~~~g~~~~A~~~~~~~~~~~~ 506 (597)
T 2xpi_A 470 ---------LFQYDP------LLL----------------------------NELGVVAFNKSDMQTAINHFQNALLLVK 506 (597)
T ss_dssp ---------HCCCCH------HHH----------------------------HHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ---------hCCCCh------HHH----------------------------HHHHHHHHHhCCHHHHHHHHHHHHHhhh
Confidence 000000 000 0000011123678899999999988876
Q ss_pred HhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Q 011759 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (478)
Q Consensus 224 k~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~ 303 (478)
+........+.+|..||.++...|+|++|+..|++++++. +++ +.+|+.||.+|...|++++|+.+|+++++
T Consensus 507 ~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-----p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~~l~ 578 (597)
T 2xpi_A 507 KTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLS-----TND---ANVHTAIALVYLHKKIPGLAITHLHESLA 578 (597)
T ss_dssp HSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----SCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-----CCC---hHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 6433333358999999999999999999999999999874 233 58999999999999999999999999998
Q ss_pred HH
Q 011759 304 VC 305 (478)
Q Consensus 304 I~ 305 (478)
+.
T Consensus 579 ~~ 580 (597)
T 2xpi_A 579 IS 580 (597)
T ss_dssp HC
T ss_pred cC
Confidence 64
No 101
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.16 E-value=9.4e-10 Score=97.01 Aligned_cols=85 Identities=18% Similarity=0.022 Sum_probs=73.7
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|.++|+.++.+. +..+.+|.+||.+++.+|+|++|+.+|+++|.+... .+.+|++||.+|
T Consensus 25 g~~~~A~~~~~~al~~~-------p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~--------~~~~~~~lg~~~ 89 (164)
T 3sz7_A 25 KEYSKAIDLYTQALSIA-------PANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPK--------YSKAWSRLGLAR 89 (164)
T ss_dssp TCHHHHHHHHHHHHHHS-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--------CHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhC-------CcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC--------CHHHHHHHHHHH
Confidence 45777888888777652 445889999999999999999999999999998533 268999999999
Q ss_pred HcCCCchHHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I~ 305 (478)
..+++|++|+.+|+++|.+.
T Consensus 90 ~~~g~~~~A~~~~~~al~~~ 109 (164)
T 3sz7_A 90 FDMADYKGAKEAYEKGIEAE 109 (164)
T ss_dssp HHTTCHHHHHHHHHHHHHHH
T ss_pred HHccCHHHHHHHHHHHHHhC
Confidence 99999999999999999874
No 102
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.15 E-value=7.2e-10 Score=104.99 Aligned_cols=158 Identities=14% Similarity=0.165 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHh----hhhccCCccCCCCCCcCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLY----KAQEEADPLVSVPKKEGDSQQ 141 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~----~a~~esdvLg~~~~~~~e~~~ 141 (478)
+..++.+|..++..|+|++|+.+|.+|++ +....+++++|.+++. .++.+..+--
T Consensus 6 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~----------~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~----------- 64 (273)
T 1ouv_A 6 PKELVGLGAKSYKEKDFTQAKKYFEKACD----------LKENSGCFNLGVLYYQGQGVEKNLKKAASF----------- 64 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHTSSSCCCHHHHHHH-----------
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHH----------CCCHHHHHHHHHHHHcCCCcCCCHHHHHHH-----------
Confidence 56788999999999999999999999998 3345789999999986 2111000000
Q ss_pred CCCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccc----cccCcChHHHHHHHHHH
Q 011759 142 GSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAE----ADEDESDLDLAWKMLDV 217 (478)
Q Consensus 142 ~~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e----~eEd~ddle~AwE~Le~ 217 (478)
.......... .. . -..+. +....++++.|+++|+.
T Consensus 65 -------~~~a~~~~~~------~a--------~--------------------~~lg~~~~~g~~~~~~~~~A~~~~~~ 103 (273)
T 1ouv_A 65 -------YAKACDLNYS------NG--------C--------------------HLLGNLYYSGQGVSQNTNKALQYYSK 103 (273)
T ss_dssp -------HHHHHHTTCH------HH--------H--------------------HHHHHHHHHTSSSCCCHHHHHHHHHH
T ss_pred -------HHHHHHCCCH------HH--------H--------------------HHHHHHHhCCCCcccCHHHHHHHHHH
Confidence 0000000000 00 0 00000 00013566666666666
Q ss_pred HHHHHHHhcCCCchHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHc----CC
Q 011759 218 ARAIAEKHWGDSMEKVDILSALAEVALE----REDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI----GS 289 (478)
Q Consensus 218 Ar~I~ek~l~~~~~~Ad~~~~LGev~le----~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~----~~ 289 (478)
|..+ ....++.+||.++.. .++|++|+.+|++++++. -+.++++||.+|.. .+
T Consensus 104 a~~~---------~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~----------~~~a~~~lg~~~~~~~~~~~ 164 (273)
T 1ouv_A 104 ACDL---------KYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN----------DGDGCTILGSLYDAGRGTPK 164 (273)
T ss_dssp HHHT---------TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT----------CHHHHHHHHHHHHHTSSSCC
T ss_pred HHHc---------CCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC----------cHHHHHHHHHHHHcCCCCCC
Confidence 6532 245677788888887 788888888888777642 14677788888877 77
Q ss_pred CchHHHHHHHHHHHH
Q 011759 290 KPQEAIPYCQKAISV 304 (478)
Q Consensus 290 ~~eeAl~~~ekAL~I 304 (478)
++++|+.+|++|++.
T Consensus 165 ~~~~A~~~~~~a~~~ 179 (273)
T 1ouv_A 165 DLKKALASYDKACDL 179 (273)
T ss_dssp CHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHC
Confidence 788888888877765
No 103
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.14 E-value=5e-10 Score=92.71 Aligned_cols=119 Identities=17% Similarity=0.175 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCC
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~ 143 (478)
.....++.+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+++..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~la~~~~~~---------------------- 63 (133)
T 2lni_A 14 DLALMVKNKGNECFQKGDYPQAMKHYTEAIKR--------NPKDAKLYSNRAACYTKL---------------------- 63 (133)
T ss_dssp CHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTT--------CTTCHHHHHHHHHHHTTT----------------------
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCCcHHHHHHHHHHHHHh----------------------
Confidence 34788999999999999999999999999986 677789999999998654
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
++++.|+.+|+.++.+.
T Consensus 64 --------------------------------------------------------------~~~~~A~~~~~~a~~~~- 80 (133)
T 2lni_A 64 --------------------------------------------------------------LEFQLALKDCEECIQLE- 80 (133)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHC-
T ss_pred --------------------------------------------------------------ccHHHHHHHHHHHHHhC-
Confidence 45777888888887652
Q ss_pred HhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCC
Q 011759 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGS 289 (478)
Q Consensus 224 k~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~ 289 (478)
+....+|..||.++...|+|++|+.+|++++.+.... ..+++.|+.+|...+
T Consensus 81 ------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~--------~~~~~~l~~~~~~~~ 132 (133)
T 2lni_A 81 ------PTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSC--------KEAADGYQRCMMAQY 132 (133)
T ss_dssp ------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGG--------THHHHHHHHHHHHHT
T ss_pred ------CCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCc--------hHHHHHHHHHHHHhc
Confidence 3457899999999999999999999999999885433 478899999987655
No 104
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.14 E-value=7.4e-10 Score=90.95 Aligned_cols=122 Identities=15% Similarity=0.177 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCC
Q 011759 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (478)
Q Consensus 65 ~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~ 144 (478)
.+..++.+|..++..|+|++|+.+|.+++.+ .|....+|+.+|.+++..
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~la~~~~~~----------------------- 51 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKEL--------DPTNMTYITNQAAVYFEK----------------------- 51 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHH-----------------------
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCccHHHHHHHHHHHHHh-----------------------
Confidence 4778999999999999999999999999997 577789999999999875
Q ss_pred CccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011759 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (478)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek 224 (478)
++++.|..+|+.++.+...
T Consensus 52 -------------------------------------------------------------~~~~~A~~~~~~~~~~~~~ 70 (131)
T 1elr_A 52 -------------------------------------------------------------GDYNKCRELCEKAIEVGRE 70 (131)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------------------------ccHHHHHHHHHHHHhhccc
Confidence 4577888999999888776
Q ss_pred hcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHc
Q 011759 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI 287 (478)
Q Consensus 225 ~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~ 287 (478)
..........+|..||.++...|+|++|+.+|++++.+. + + ...++.|+.++..
T Consensus 71 ~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-----~-~---~~~~~~l~~~~~~ 124 (131)
T 1elr_A 71 NREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEH-----R-T---PDVLKKCQQAEKI 124 (131)
T ss_dssp STTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----C-C---HHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-----C-C---HHHHHHHHHHHHH
Confidence 544445568999999999999999999999999999863 2 2 3556666666543
No 105
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.13 E-value=3.9e-10 Score=105.05 Aligned_cols=127 Identities=11% Similarity=-0.003 Sum_probs=104.6
Q ss_pred HHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCCccccccccCC
Q 011759 76 ALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNAVNG 155 (478)
Q Consensus 76 ~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~de~~~~~~~~ 155 (478)
....++|++|+.+|.+++++ .....|..+.+|+.+|.+++..
T Consensus 15 ~~~~~~~~~A~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~---------------------------------- 56 (275)
T 1xnf_A 15 LQPTLQQEVILARMEQILAS----RALTDDERAQLLYERGVLYDSL---------------------------------- 56 (275)
T ss_dssp CCCCHHHHHHHHHHHHHHTS----SCCCHHHHHHHHHHHHHHHHHT----------------------------------
T ss_pred cCccchHHHHHHHHHHHHhc----ccccCchhHHHHHHHHHHHHHc----------------------------------
Confidence 34568999999999999986 2234578999999999999875
Q ss_pred CCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCCCchHHHH
Q 011759 156 ESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSMEKVDI 235 (478)
Q Consensus 156 e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~ 235 (478)
++++.|...|+.++.+ .+....+
T Consensus 57 --------------------------------------------------~~~~~A~~~~~~al~~-------~~~~~~~ 79 (275)
T 1xnf_A 57 --------------------------------------------------GLRALARNDFSQALAI-------RPDMPEV 79 (275)
T ss_dssp --------------------------------------------------TCHHHHHHHHHHHHHH-------CCCCHHH
T ss_pred --------------------------------------------------ccHHHHHHHHHHHHHc-------CCCcHHH
Confidence 3566777777777765 2346789
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Q 011759 236 LSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 236 ~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~ 305 (478)
|..||.++...|+|++|+.+|++++.+... ...+|++||.+|...|++++|+.+|++++.+.
T Consensus 80 ~~~la~~~~~~~~~~~A~~~~~~al~~~~~--------~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 141 (275)
T 1xnf_A 80 FNYLGIYLTQAGNFDAAYEAFDSVLELDPT--------YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDD 141 (275)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--------CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhcCcc--------ccHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 999999999999999999999999987432 24889999999999999999999999998864
No 106
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.13 E-value=1e-09 Score=105.16 Aligned_cols=88 Identities=10% Similarity=-0.095 Sum_probs=72.4
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|.+.|+.++.+. .........+|..||.++...|+|++|+..|++++.+. |....+|+++|.+|
T Consensus 248 ~~~~~A~~~~~~~~~~~---~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~~~~~~ 316 (359)
T 3ieg_A 248 GRYTDATSKYESVMKTE---PSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQME--------PDNVNALKDRAEAY 316 (359)
T ss_dssp TCHHHHHHHHHHHHHHC---CSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcC---CCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--------cccHHHHHHHHHHH
Confidence 56778888887777653 22223356789999999999999999999999999972 22357999999999
Q ss_pred HcCCCchHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I 304 (478)
...|++++|+.+|++++++
T Consensus 317 ~~~g~~~~A~~~~~~a~~~ 335 (359)
T 3ieg_A 317 LIEEMYDEAIQDYEAAQEH 335 (359)
T ss_dssp HHTTCHHHHHHHHHHHHTT
T ss_pred HHcCCHHHHHHHHHHHHhc
Confidence 9999999999999999865
No 107
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.13 E-value=6.1e-10 Score=98.05 Aligned_cols=92 Identities=13% Similarity=0.013 Sum_probs=77.9
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCC-----------CchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGD-----------SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHI 274 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~-----------~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~i 274 (478)
++|+.|...|..|+.++...... .+..+.+|.+||.+++.+|+|++|+.+|+++|.+.. ..
T Consensus 25 ~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p--------~~ 96 (162)
T 3rkv_A 25 KDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREE--------TN 96 (162)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST--------TC
T ss_pred CCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCC--------cc
Confidence 46888888898888886554210 345688999999999999999999999999999842 33
Q ss_pred HHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Q 011759 275 AELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 275 Aea~~~LG~ay~~~~~~eeAl~~~ekAL~I~ 305 (478)
+.+||++|.+|..+|+|++|+.+|+++|.+.
T Consensus 97 ~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~ 127 (162)
T 3rkv_A 97 EKALFRRAKARIAAWKLDEAEEDLKLLLRNH 127 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHhcHHHHHHHHHHHHhcC
Confidence 6899999999999999999999999999863
No 108
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.13 E-value=6e-10 Score=100.10 Aligned_cols=101 Identities=11% Similarity=0.052 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCC
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~ 143 (478)
..+..++.+|..++..|+|++|+.+|.+++.+ +|..+.+|+++|.+|+.+
T Consensus 34 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~--------~P~~~~~~~~lg~~~~~~---------------------- 83 (151)
T 3gyz_A 34 DMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY--------DFYNVDYIMGLAAIYQIK---------------------- 83 (151)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHH----------------------
Confidence 34778999999999999999999999999999 799999999999999875
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
++++.|.+.|+.|+.+
T Consensus 84 --------------------------------------------------------------g~~~~Ai~~~~~al~l-- 99 (151)
T 3gyz_A 84 --------------------------------------------------------------EQFQQAADLYAVAFAL-- 99 (151)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHH--
T ss_pred --------------------------------------------------------------ccHHHHHHHHHHHHhh--
Confidence 4577788888888765
Q ss_pred HhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 011759 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTIL 263 (478)
Q Consensus 224 k~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~ 263 (478)
.|....+|++||.++..+|+|++|+.+|+++|++.
T Consensus 100 -----~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~ 134 (151)
T 3gyz_A 100 -----GKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHS 134 (151)
T ss_dssp -----SSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred -----CCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 34556799999999999999999999999999986
No 109
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.13 E-value=7.5e-10 Score=93.00 Aligned_cols=85 Identities=15% Similarity=-0.017 Sum_probs=73.5
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|...|+.|+.+ .+..+.+|.++|.+++.+|+|++|+.+|+++|.+... ...+|++||.+|
T Consensus 18 ~~~~~A~~~~~~al~~-------~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~--------~~~~~~~lg~~~ 82 (126)
T 3upv_A 18 SDWPNAVKAYTEMIKR-------APEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPN--------FVRAYIRKATAQ 82 (126)
T ss_dssp TCHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--------CHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHh-------CCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC--------cHHHHHHHHHHH
Confidence 4577788888877765 2445789999999999999999999999999998432 268999999999
Q ss_pred HcCCCchHHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I~ 305 (478)
...|++++|+.+|++++.+.
T Consensus 83 ~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 83 IAVKEYASALETLDAARTKD 102 (126)
T ss_dssp HHTTCHHHHHHHHHHHHHHH
T ss_pred HHHhCHHHHHHHHHHHHHhC
Confidence 99999999999999999875
No 110
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.12 E-value=3.8e-11 Score=106.68 Aligned_cols=127 Identities=13% Similarity=0.117 Sum_probs=102.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCCccccc
Q 011759 71 EKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVK 150 (478)
Q Consensus 71 ~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~de~~~ 150 (478)
..+..++..|+|++|+.+|.+++++ +|..+.+|+.+|.+++..
T Consensus 15 ~~~~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~----------------------------- 57 (177)
T 2e2e_A 15 DPLHQFASQQNPEAQLQALQDKIRA--------NPQNSEQWALLGEYYLWQ----------------------------- 57 (177)
T ss_dssp TTTCCCC-----CCCCHHHHHHHHH--------CCSCHHHHHHHHHHHHHT-----------------------------
T ss_pred hhhhhhhhccCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHc-----------------------------
Confidence 3444566789999999999999998 688899999999999865
Q ss_pred cccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCCCc
Q 011759 151 NAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSM 230 (478)
Q Consensus 151 ~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~l~~~~ 230 (478)
++++.|...|+.++.+. +
T Consensus 58 -------------------------------------------------------~~~~~A~~~~~~al~~~-------p 75 (177)
T 2e2e_A 58 -------------------------------------------------------NDYSNSLLAYRQALQLR-------G 75 (177)
T ss_dssp -------------------------------------------------------TCHHHHHHHHHHHHHHH-------C
T ss_pred -------------------------------------------------------CCHHHHHHHHHHHHHcC-------C
Confidence 45777888888887664 2
Q ss_pred hHHHHHHHHHHH-HHhcCCH--HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 231 EKVDILSALAEV-ALEREDI--ETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 231 ~~Ad~~~~LGev-~le~g~f--eeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
....++..||.+ +...|+| ++|+..|++++.+.. ++ ..++++||.+|...|++++|+.+|++++.+
T Consensus 76 ~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p-----~~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 144 (177)
T 2e2e_A 76 ENAELYAALATVLYYQASQHMTAQTRAMIDKALALDS-----NE---ITALMLLASDAFMQANYAQAIELWQKVMDL 144 (177)
T ss_dssp SCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCT-----TC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCC-----Cc---HHHHHHHHHHHHHcccHHHHHHHHHHHHhh
Confidence 346799999999 8899999 999999999998743 22 578999999999999999999999998864
No 111
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.12 E-value=4.8e-10 Score=117.19 Aligned_cols=136 Identities=18% Similarity=0.192 Sum_probs=108.8
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh-------CCCChhHHHHHHHHHHHHHhhhhccCCccCCCCC
Q 011759 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-------GELALECVNAYYQYGRALLYKAQEEADPLVSVPK 134 (478)
Q Consensus 62 ~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~-------Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~ 134 (478)
....+..+..+|..++..|+|++|+.+|.+|+++.-... .+..+..+.+|+++|.+|+.+
T Consensus 264 ~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~------------- 330 (457)
T 1kt0_A 264 KLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKL------------- 330 (457)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHT-------------
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHh-------------
Confidence 446788999999999999999999999999999842210 001233479999999999976
Q ss_pred CcCCCCCCCCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHH
Q 011759 135 KEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKM 214 (478)
Q Consensus 135 ~~~e~~~~~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~ 214 (478)
++++.|...
T Consensus 331 -----------------------------------------------------------------------g~~~~A~~~ 339 (457)
T 1kt0_A 331 -----------------------------------------------------------------------REYTKAVEC 339 (457)
T ss_dssp -----------------------------------------------------------------------TCHHHHHHH
T ss_pred -----------------------------------------------------------------------cCHHHHHHH
Confidence 457778888
Q ss_pred HHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHH
Q 011759 215 LDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEA 294 (478)
Q Consensus 215 Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeA 294 (478)
|+.|+.+ .+..+.+|+++|.+|+.+++|++|+.+|++||++... ...+|++|+.+|...+++++|
T Consensus 340 ~~~al~~-------~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~--------~~~a~~~l~~~~~~~~~~~~a 404 (457)
T 1kt0_A 340 CDKALGL-------DSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQ--------NKAARLQISMCQKKAKEHNER 404 (457)
T ss_dssp HHHHHHH-------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC------------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhc-------CCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHHHHHHHH
Confidence 8888765 2356889999999999999999999999999987543 347899999999999988877
Q ss_pred HH
Q 011759 295 IP 296 (478)
Q Consensus 295 l~ 296 (478)
..
T Consensus 405 ~~ 406 (457)
T 1kt0_A 405 DR 406 (457)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 112
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.09 E-value=1.9e-09 Score=108.16 Aligned_cols=89 Identities=10% Similarity=-0.099 Sum_probs=73.4
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|+++|+.++.+. ..+......+|..||.++...|+|++|+.+|++++.+. |..+.+|++||.+|
T Consensus 271 g~~~~A~~~~~~~l~~~---p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~--------p~~~~~~~~l~~~~ 339 (450)
T 2y4t_A 271 GRYTDATSKYESVMKTE---PSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQME--------PDNVNALKDRAEAY 339 (450)
T ss_dssp TCHHHHHHHHHHHHHHC---CSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcC---CcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC--------cccHHHHHHHHHHH
Confidence 46778888888877642 22222347799999999999999999999999999873 22358999999999
Q ss_pred HcCCCchHHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I~ 305 (478)
...|++++|+.+|++++++.
T Consensus 340 ~~~~~~~~A~~~~~~al~~~ 359 (450)
T 2y4t_A 340 LIEEMYDEAIQDYETAQEHN 359 (450)
T ss_dssp HHTTCHHHHHHHHHHHHTTS
T ss_pred HHhcCHHHHHHHHHHHHHhC
Confidence 99999999999999999863
No 113
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.09 E-value=2.2e-09 Score=107.71 Aligned_cols=155 Identities=10% Similarity=0.042 Sum_probs=124.4
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCC
Q 011759 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQG 142 (478)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~ 142 (478)
......|..+|..++.+|+|++|.++|.+++.++... +. +...+.++..+|.++.
T Consensus 52 ~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~-~~-~~~~~~~~~~l~~~~~----------------------- 106 (434)
T 4b4t_Q 52 NEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQF-AK-SKTVKVLKTLIEKFEQ----------------------- 106 (434)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTS-CH-HHHHHHHHHHHHHHCS-----------------------
T ss_pred hhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc-cc-hHHHHHHHHHHHHHHh-----------------------
Confidence 3446678999999999999999999999999986432 11 2222334444443321
Q ss_pred CCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011759 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 222 (478)
Q Consensus 143 ~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ 222 (478)
..++++.|.+++..++.++
T Consensus 107 -------------------------------------------------------------~~~~~~~a~~~~~~~~~~~ 125 (434)
T 4b4t_Q 107 -------------------------------------------------------------VPDSLDDQIFVCEKSIEFA 125 (434)
T ss_dssp -------------------------------------------------------------CCSCHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------------------------CCCCHHHHHHHHHHHHHHH
Confidence 0156788999999999988
Q ss_pred HHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHH
Q 011759 223 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (478)
Q Consensus 223 ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL 302 (478)
.+.. .....+.++.+||.++.+.|+|.+|+..|++++.+..... +++..+++|.++|.+|...++|++|..+|++++
T Consensus 126 ~~~~-~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al 202 (434)
T 4b4t_Q 126 KREK-RVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLD--DKPSLVDVHLLESKVYHKLRNLAKSKASLTAAR 202 (434)
T ss_dssp HHSS-CCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSS--CSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHhC-ccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcc--cchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 7664 3456899999999999999999999999999998887653 678899999999999999999999999999999
Q ss_pred HHHH
Q 011759 303 SVCK 306 (478)
Q Consensus 303 ~I~k 306 (478)
.+..
T Consensus 203 ~~~~ 206 (434)
T 4b4t_Q 203 TAAN 206 (434)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 8864
No 114
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.09 E-value=4.6e-09 Score=88.38 Aligned_cols=102 Identities=23% Similarity=0.270 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~ 145 (478)
+..++.+|..++..|+|++|+.+|.+++.+ .|....+|+++|.+++.+
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~l~~~~~~~------------------------ 56 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITR--------NPLVAVYYTNRALCYLKM------------------------ 56 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhh--------CcCcHHHHHHHHHHHHHh------------------------
Confidence 678999999999999999999999999998 688899999999999875
Q ss_pred ccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011759 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (478)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~ 225 (478)
++++.|...|+.++.+.
T Consensus 57 ------------------------------------------------------------~~~~~A~~~~~~al~~~--- 73 (137)
T 3q49_B 57 ------------------------------------------------------------QQPEQALADCRRALELD--- 73 (137)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHHC---
T ss_pred ------------------------------------------------------------cCHHHHHHHHHHHHHhC---
Confidence 35677888888777652
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 011759 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERM 266 (478)
Q Consensus 226 l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~l 266 (478)
+....+|.+||.++...|+|++|+.+|++++.+....
T Consensus 74 ----p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~ 110 (137)
T 3q49_B 74 ----GQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 110 (137)
T ss_dssp ----TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred ----chhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhH
Confidence 3467899999999999999999999999999999874
No 115
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.08 E-value=1.5e-09 Score=110.18 Aligned_cols=173 Identities=17% Similarity=0.155 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCc--cCCCCCCcCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGS 143 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdv--Lg~~~~~~~e~~~~~ 143 (478)
...+..+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+++..++.+... +-....
T Consensus 304 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~--------- 366 (514)
T 2gw1_A 304 SSVYYHRGQMNFILQNYDQAGKDFDKAKEL--------DPENIFPYIQLACLAYRENKFDDCETLFSEAKR--------- 366 (514)
T ss_dssp THHHHHHHHHHHHTTCTTHHHHHHHHHHHT--------CSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--------ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---------
Confidence 446889999999999999999999999986 5667789999999998876543221 000000
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
..+... ... -..+...-..++++.|..+|+.++.+..
T Consensus 367 ---------~~~~~~------~~~----------------------------~~la~~~~~~~~~~~A~~~~~~a~~~~~ 403 (514)
T 2gw1_A 367 ---------KFPEAP------EVP----------------------------NFFAEILTDKNDFDKALKQYDLAIELEN 403 (514)
T ss_dssp ---------HSTTCS------HHH----------------------------HHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ---------HcccCH------HHH----------------------------HHHHHHHHHCCCHHHHHHHHHHHHHhhh
Confidence 000000 000 0000011123678888888888877765
Q ss_pred HhcCCCchHHHHHHHHHHHHHh---cCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHH
Q 011759 224 KHWGDSMEKVDILSALAEVALE---REDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQK 300 (478)
Q Consensus 224 k~l~~~~~~Ad~~~~LGev~le---~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ek 300 (478)
.... ....+.+|..||.++.. .|+|++|+..|++++.+.. + ...+|+.||.+|...|++++|+.+|++
T Consensus 404 ~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~-----~---~~~~~~~la~~~~~~g~~~~A~~~~~~ 474 (514)
T 2gw1_A 404 KLDG-IYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDP-----R---SEQAKIGLAQMKLQQEDIDEAITLFEE 474 (514)
T ss_dssp TSSS-CSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCT-----T---CHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ccch-HHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCc-----c---cHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 4422 12336699999999999 9999999999999998742 2 358899999999999999999999999
Q ss_pred HHHHHHH
Q 011759 301 AISVCKS 307 (478)
Q Consensus 301 AL~I~k~ 307 (478)
++.+...
T Consensus 475 a~~~~~~ 481 (514)
T 2gw1_A 475 SADLART 481 (514)
T ss_dssp HHHHCSS
T ss_pred HHHhccc
Confidence 9987543
No 116
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.08 E-value=6.2e-09 Score=85.33 Aligned_cols=92 Identities=24% Similarity=0.260 Sum_probs=78.8
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|..+|+.++.+. +....+|.+||.++...|+|++|+.+|++++.+.... +..++.++.+|++||.+|
T Consensus 18 ~~~~~A~~~~~~a~~~~-------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~~~~~~~la~~~ 89 (131)
T 1elr_A 18 KDFDTALKHYDKAKELD-------PTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN-REDYRQIAKAYARIGNSY 89 (131)
T ss_dssp TCHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcC-------CccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc-chhHHHHHHHHHHHHHHH
Confidence 45777888888777652 3457899999999999999999999999999998754 445666789999999999
Q ss_pred HcCCCchHHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I~ 305 (478)
...+++++|+.+|++++.+.
T Consensus 90 ~~~~~~~~A~~~~~~~~~~~ 109 (131)
T 1elr_A 90 FKEEKYKDAIHFYNKSLAEH 109 (131)
T ss_dssp HHTTCHHHHHHHHHHHHHHC
T ss_pred HHhccHHHHHHHHHHHHHhC
Confidence 99999999999999999874
No 117
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.08 E-value=3.2e-09 Score=106.54 Aligned_cols=138 Identities=17% Similarity=0.193 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCC
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~ 143 (478)
..+..++.+|..++..|+|++|+.+|.+++++ +|..+.+|+.+|.+++..
T Consensus 24 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~--------~p~~~~~~~~l~~~~~~~---------------------- 73 (450)
T 2y4t_A 24 ADVEKHLELGKKLLAAGQLADALSQFHAAVDG--------DPDNYIAYYRRATVFLAM---------------------- 73 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHC----------------------
Confidence 35788999999999999999999999999987 688899999999999875
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
++++.|..+|+.++.+
T Consensus 74 --------------------------------------------------------------g~~~~A~~~~~~al~~-- 89 (450)
T 2y4t_A 74 --------------------------------------------------------------GKSKAALPDLTKVIQL-- 89 (450)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHH--
T ss_pred --------------------------------------------------------------CCHHHHHHHHHHHHhc--
Confidence 3466777777777654
Q ss_pred HhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChH------------HHHHHHHHHHHHHcCCCc
Q 011759 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRH------------IAELNFRICLCLEIGSKP 291 (478)
Q Consensus 224 k~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~------------iAea~~~LG~ay~~~~~~ 291 (478)
.+....+|..||.++...|+|++|+..|++++.+. +++.. ....++.+|.+|...|++
T Consensus 90 -----~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~ 159 (450)
T 2y4t_A 90 -----KMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSN-----PSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDY 159 (450)
T ss_dssp -----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred -----CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-----CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 24557899999999999999999999999998743 22221 122356668889999999
Q ss_pred hHHHHHHHHHHHHH
Q 011759 292 QEAIPYCQKAISVC 305 (478)
Q Consensus 292 eeAl~~~ekAL~I~ 305 (478)
++|+.+|++++.+.
T Consensus 160 ~~A~~~~~~~~~~~ 173 (450)
T 2y4t_A 160 TAAIAFLDKILEVC 173 (450)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999988764
No 118
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.07 E-value=2.7e-09 Score=111.37 Aligned_cols=171 Identities=14% Similarity=0.155 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCc--cCCCCCCcCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGS 143 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdv--Lg~~~~~~~e~~~~~ 143 (478)
...+..+|..++..|+|++|..+|.+++++ .|....+|+.+|.+|...++.+..+ |-....
T Consensus 373 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~--------- 435 (597)
T 2xpi_A 373 AVTWLAVGIYYLCVNKISEARRYFSKSSTM--------DPQFGPAWIGFAHSFAIEGEHDQAISAYTTAAR--------- 435 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---------
Confidence 677888999999999999999999999997 6788899999999999987654321 100000
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
..+... ... -.........++++.|+++|+.++.+
T Consensus 436 ---------~~~~~~------~~~----------------------------~~l~~~~~~~g~~~~A~~~~~~~~~~-- 470 (597)
T 2xpi_A 436 ---------LFQGTH------LPY----------------------------LFLGMQHMQLGNILLANEYLQSSYAL-- 470 (597)
T ss_dssp ---------TTTTCS------HHH----------------------------HHHHHHHHHHTCHHHHHHHHHHHHHH--
T ss_pred ---------hCccch------HHH----------------------------HHHHHHHHHcCCHHHHHHHHHHHHHh--
Confidence 000000 000 00000011235666677666666543
Q ss_pred HhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Q 011759 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (478)
Q Consensus 224 k~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~ 303 (478)
.+....+|+.||.++...|+|++|+..|++++++.+.. +.+....+.+|+.||.+|...|++++|+.+|++++.
T Consensus 471 -----~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~-~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~ 544 (597)
T 2xpi_A 471 -----FQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKT-QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLL 544 (597)
T ss_dssp -----CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -----CCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhcc-ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 23456789999999999999999999999999998764 223333589999999999999999999999999987
Q ss_pred H
Q 011759 304 V 304 (478)
Q Consensus 304 I 304 (478)
+
T Consensus 545 ~ 545 (597)
T 2xpi_A 545 L 545 (597)
T ss_dssp H
T ss_pred h
Confidence 6
No 119
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.07 E-value=1.2e-09 Score=111.90 Aligned_cols=169 Identities=14% Similarity=0.026 Sum_probs=119.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCC
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~ 143 (478)
..+..+..+|..++..|+|++|+.+|.+++++ .|. ..+|+.+|.+++..++.+..+--. .
T Consensus 241 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~--------~~~-~~~~~~l~~~~~~~~~~~~A~~~~--~--------- 300 (537)
T 3fp2_A 241 NAALALCYTGIFHFLKNNLLDAQVLLQESINL--------HPT-PNSYIFLALTLADKENSQEFFKFF--Q--------- 300 (537)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CCC-HHHHHHHHHHTCCSSCCHHHHHHH--H---------
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHhc--------CCC-chHHHHHHHHHHHhcCHHHHHHHH--H---------
Confidence 45788999999999999999999999999997 566 889999999998775443211000 0
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
.... ..+... ... -..+......++++.|.++|+.++.+
T Consensus 301 ---~~~~--~~~~~~------~~~----------------------------~~l~~~~~~~~~~~~A~~~~~~a~~~-- 339 (537)
T 3fp2_A 301 ---KAVD--LNPEYP------PTY----------------------------YHRGQMYFILQDYKNAKEDFQKAQSL-- 339 (537)
T ss_dssp ---HHHH--HCTTCH------HHH----------------------------HHHHHHHHHTTCHHHHHHHHHHHHHH--
T ss_pred ---HHhc--cCCCCH------HHH----------------------------HHHHHHHHhcCCHHHHHHHHHHHHHh--
Confidence 0000 000000 000 00000011235667777777666654
Q ss_pred HhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Q 011759 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (478)
Q Consensus 224 k~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~ 303 (478)
.+....+|..||.++...|+|++|+..|++++.+.. ++ ..+|+++|.+|...|++++|+.+|++++.
T Consensus 340 -----~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~-----~~---~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 406 (537)
T 3fp2_A 340 -----NPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFP-----TL---PEVPTFFAEILTDRGDFDTAIKQYDIAKR 406 (537)
T ss_dssp -----CTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC---THHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----CC---hHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 234457899999999999999999999999998742 22 47899999999999999999999999998
Q ss_pred HHH
Q 011759 304 VCK 306 (478)
Q Consensus 304 I~k 306 (478)
+..
T Consensus 407 ~~~ 409 (537)
T 3fp2_A 407 LEE 409 (537)
T ss_dssp HHH
T ss_pred cCC
Confidence 764
No 120
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.07 E-value=3.4e-10 Score=113.61 Aligned_cols=140 Identities=14% Similarity=0.075 Sum_probs=73.9
Q ss_pred chhhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHH-----------------HHHHHHHHHHHh
Q 011759 58 EREKTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECV-----------------NAYYQYGRALLY 120 (478)
Q Consensus 58 ~~~~~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A-----------------~~y~~YG~ALl~ 120 (478)
.....+..+..+..+|..++..|+|++|+.+|.+|+.+. |... .+|+++|.+|+.
T Consensus 171 ~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~--------p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~ 242 (338)
T 2if4_A 171 TVEERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYM--------GDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK 242 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHS--------CHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh--------ccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 344567789999999999999999999999999999983 4333 366666666664
Q ss_pred hhhccCCccCCCCCCcCCCCCCCCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccc
Q 011759 121 KAQEEADPLVSVPKKEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAE 200 (478)
Q Consensus 121 ~a~~esdvLg~~~~~~~e~~~~~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e 200 (478)
+
T Consensus 243 ~------------------------------------------------------------------------------- 243 (338)
T 2if4_A 243 L------------------------------------------------------------------------------- 243 (338)
T ss_dssp T-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 3
Q ss_pred cccCcChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 011759 201 ADEDESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFR 280 (478)
Q Consensus 201 ~eEd~ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~ 280 (478)
++++.|+..|+.|+.+ .+..+.+|++||.+++.+|+|++|+.+|+++|++.... ..++++
T Consensus 244 -----g~~~~A~~~~~~al~~-------~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~--------~~a~~~ 303 (338)
T 2if4_A 244 -----KRYDEAIGHCNIVLTE-------EEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDD--------KAIRRE 303 (338)
T ss_dssp -----TCCHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-------------------
T ss_pred -----CCHHHHHHHHHHHHHh-------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC--------HHHHHH
Confidence 2344555555555543 12345667777777777777777777777776665332 355666
Q ss_pred HHHHHH-cCCCchHHHHHHHHHHHH
Q 011759 281 ICLCLE-IGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 281 LG~ay~-~~~~~eeAl~~~ekAL~I 304 (478)
|+.++. ..+.++++..+|++++..
T Consensus 304 L~~l~~~~~~~~~~a~~~~~~~l~~ 328 (338)
T 2if4_A 304 LRALAEQEKALYQKQKEMYKGIFKG 328 (338)
T ss_dssp -------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 666633 334555666666665543
No 121
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.07 E-value=6.1e-11 Score=118.81 Aligned_cols=128 Identities=14% Similarity=0.024 Sum_probs=106.1
Q ss_pred HcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCCccccccccCCCC
Q 011759 78 KESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNAVNGES 157 (478)
Q Consensus 78 ~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~de~~~~~~~~e~ 157 (478)
..++|++|+++|.+++++ .|..+.+|+.+|.+|+..
T Consensus 125 ~L~~~~~A~~~~~~a~~~--------~p~~a~~~~~~g~~~~~~------------------------------------ 160 (336)
T 1p5q_A 125 HLKSFEKAKESWEMNSEE--------KLEQSTIVKERGTVYFKE------------------------------------ 160 (336)
T ss_dssp EEEEEECCCCGGGCCHHH--------HHHHHHHHHHHHHHHHHH------------------------------------
T ss_pred EEeecccccchhcCCHHH--------HHHHHHHHHHHHHHHHHC------------------------------------
Confidence 567888999999999887 589999999999999976
Q ss_pred CccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcC--------CC
Q 011759 158 STASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWG--------DS 229 (478)
Q Consensus 158 a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~l~--------~~ 229 (478)
++++.|...|+.|+.+...... ..
T Consensus 161 ------------------------------------------------g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~ 192 (336)
T 1p5q_A 161 ------------------------------------------------GKYKQALLQYKKIVSWLEYESSFSNEEAQKAQ 192 (336)
T ss_dssp ------------------------------------------------TCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHH
T ss_pred ------------------------------------------------CCHHHHHHHHHHHHHHhhccccCChHHHHHHH
Confidence 3566777777777766543211 01
Q ss_pred chHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Q 011759 230 MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 230 ~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~ 305 (478)
+..+.+|.+||.+++.+|+|++|+.+|+++|.+... .+.+||+||.+|..+++|++|+.+|++||.+.
T Consensus 193 ~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~--------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 260 (336)
T 1p5q_A 193 ALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSN--------NEKGLSRRGEAHLAVNDFELARADFQKVLQLY 260 (336)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--------cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Confidence 234789999999999999999999999999998532 36899999999999999999999999999873
No 122
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.06 E-value=2.3e-11 Score=128.31 Aligned_cols=130 Identities=17% Similarity=0.183 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCC
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~ 143 (478)
+.+..+..+|..++.+|+|++|+.+|.+|+++ +|..+.+|+++|.+|+.+
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~--------~p~~~~~~~~lg~~~~~~---------------------- 53 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIEL--------NPSNAIYYGNRSLAYLRT---------------------- 53 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT----------------------
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHh----------------------
Confidence 45777888999999999999999999999998 799999999999999875
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
++++.|.+.|+.|+.+
T Consensus 54 --------------------------------------------------------------g~~~~A~~~~~~al~l-- 69 (477)
T 1wao_1 54 --------------------------------------------------------------ECYGYALGDATRAIEL-- 69 (477)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHS--
T ss_pred --------------------------------------------------------------cCHHHHHHHHHHHHHh--
Confidence 3567777777777765
Q ss_pred HhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH--HHcCCCchHHHHHHHH
Q 011759 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLC--LEIGSKPQEAIPYCQK 300 (478)
Q Consensus 224 k~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~a--y~~~~~~eeAl~~~ek 300 (478)
.+..+.+|.+||.++..+|+|++|+.+|+++|++.. ++ ..++++|+.+ |...++|++|+.+|++
T Consensus 70 -----~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p-----~~---~~~~~~l~~~~~~~~~g~~~~A~~~~~~ 135 (477)
T 1wao_1 70 -----DKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKP-----HD---KDAKMKYQECNKIVKQKAFERAIAGDEH 135 (477)
T ss_dssp -----CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST-----TC---TTHHHHHHHHHHHHHHHHHCCC------
T ss_pred -----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----CC---HHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 346688999999999999999999999999999843 22 3578888888 8888999999999983
No 123
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.05 E-value=1.4e-09 Score=111.13 Aligned_cols=139 Identities=15% Similarity=0.122 Sum_probs=112.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--------hCCCChhHHHHHHHHHHHHHhhhhccCCccC
Q 011759 59 REKTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSH--------YGELALECVNAYYQYGRALLYKAQEEADPLV 130 (478)
Q Consensus 59 ~~~~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~--------~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg 130 (478)
....+..+..|..+|..++..|+|++|+.+|.+|+++.... .....|..+.+|+++|.+|+.+
T Consensus 216 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~--------- 286 (370)
T 1ihg_A 216 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKM--------- 286 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHT---------
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhc---------
Confidence 44567789999999999999999999999999999976442 1225788999999999999875
Q ss_pred CCCCCcCCCCCCCCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHH
Q 011759 131 SVPKKEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDL 210 (478)
Q Consensus 131 ~~~~~~~e~~~~~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~ 210 (478)
++++.
T Consensus 287 ---------------------------------------------------------------------------g~~~~ 291 (370)
T 1ihg_A 287 ---------------------------------------------------------------------------SDWQG 291 (370)
T ss_dssp ---------------------------------------------------------------------------TCHHH
T ss_pred ---------------------------------------------------------------------------cCHHH
Confidence 34666
Q ss_pred HHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCC
Q 011759 211 AWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSK 290 (478)
Q Consensus 211 AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~ 290 (478)
|++.++.|+.+ .+..+.+|++||.++..+++|++|+.+|++||++.. ++ ..+++.|+.++...++
T Consensus 292 A~~~~~~al~~-------~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P-----~~---~~~~~~l~~~~~~~~~ 356 (370)
T 1ihg_A 292 AVDSCLEALEI-------DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAP-----ED---KAIQAELLKVKQKIKA 356 (370)
T ss_dssp HHHHHHHHHTT-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-------CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-----CC---HHHHHHHHHHHHHHHH
Confidence 77777666643 356789999999999999999999999999998853 22 4678888888887777
Q ss_pred chHHHH
Q 011759 291 PQEAIP 296 (478)
Q Consensus 291 ~eeAl~ 296 (478)
++++..
T Consensus 357 ~~~a~k 362 (370)
T 1ihg_A 357 QKDKEK 362 (370)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766643
No 124
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.05 E-value=3.4e-09 Score=107.53 Aligned_cols=74 Identities=16% Similarity=0.098 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHh---cCCHHHHHHHHHHHHHHHHHhc--CCCC----hHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Q 011759 233 VDILSALAEVALE---REDIETSLSDYQKALTILERMV--EPDS----RHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (478)
Q Consensus 233 Ad~~~~LGev~le---~g~feeAl~dy~kAL~I~~~ll--g~d~----r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~ 303 (478)
..++..+|.+++. .|+|++|+..|++++.+.+..+ .+++ +..+.+|+.+|.+|...|++++|+.+|++++.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~ 265 (514)
T 2gw1_A 186 ADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFLKNDPLGAHEDIKKAIE 265 (514)
T ss_dssp HHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 8889999999997 9999999999999999877766 4444 77899999999999999999999999999997
Q ss_pred HHH
Q 011759 304 VCK 306 (478)
Q Consensus 304 I~k 306 (478)
+..
T Consensus 266 ~~~ 268 (514)
T 2gw1_A 266 LFP 268 (514)
T ss_dssp HCC
T ss_pred hCc
Confidence 654
No 125
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.03 E-value=7e-09 Score=91.50 Aligned_cols=103 Identities=14% Similarity=0.143 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCC
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~ 143 (478)
..+..++.+|..++..|+|++|+.+|.+++.+ .|....+|+.+|.+++.+
T Consensus 19 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~---------------------- 68 (148)
T 2vgx_A 19 DTLEQLYSLAFNQYQSGXYEDAHXVFQALCVL--------DHYDSRFFLGLGACRQAM---------------------- 68 (148)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT----------------------
T ss_pred hhHHHHHHHHHHHHHcCChHHHHHHHHHHHHc--------CcccHHHHHHHHHHHHHH----------------------
Confidence 34778899999999999999999999999998 788999999999999875
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
++++.|...|+.|+.+.
T Consensus 69 --------------------------------------------------------------g~~~~A~~~~~~al~l~- 85 (148)
T 2vgx_A 69 --------------------------------------------------------------GQYDLAIHSYSYGAVMD- 85 (148)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHS-
T ss_pred --------------------------------------------------------------hhHHHHHHHHHHHHhcC-
Confidence 35677888888887652
Q ss_pred HhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 011759 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILER 265 (478)
Q Consensus 224 k~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~ 265 (478)
+....+|++||.++...|+|++|+.+|+++|++...
T Consensus 86 ------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 121 (148)
T 2vgx_A 86 ------IXEPRFPFHAAECLLQXGELAEAESGLFLAQELIAN 121 (148)
T ss_dssp ------TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred ------CCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC
Confidence 345678999999999999999999999999999863
No 126
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.02 E-value=5e-09 Score=99.20 Aligned_cols=160 Identities=14% Similarity=0.141 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCC
Q 011759 66 ADELMEKGTNALK----ESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQ 141 (478)
Q Consensus 66 A~~L~~~G~~~~~----~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~ 141 (478)
...+..+|..++. .++|++|+.+|.+|+++ | ...+++++|.+++..- .+.++.
T Consensus 38 ~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~-----~-----~~~a~~~lg~~~~~g~----~~~~~~--------- 94 (273)
T 1ouv_A 38 NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL-----N-----YSNGCHLLGNLYYSGQ----GVSQNT--------- 94 (273)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-----T-----CHHHHHHHHHHHHHTS----SSCCCH---------
T ss_pred HHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHC-----C-----CHHHHHHHHHHHhCCC----CcccCH---------
Confidence 4567889999999 99999999999999986 1 5679999999998720 011110
Q ss_pred CCCCccccc---cccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccc----cccCcChHHHHHHH
Q 011759 142 GSDKDDSVK---NAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAE----ADEDESDLDLAWKM 214 (478)
Q Consensus 142 ~~~~de~~~---~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e----~eEd~ddle~AwE~ 214 (478)
++... ........ .. . -..+. +....++++.|+++
T Consensus 95 ----~~A~~~~~~a~~~~~~------~a--------~--------------------~~lg~~~~~~~~~~~~~~~A~~~ 136 (273)
T 1ouv_A 95 ----NKALQYYSKACDLKYA------EG--------C--------------------ASLGGIYHDGKVVTRDFKKAVEY 136 (273)
T ss_dssp ----HHHHHHHHHHHHTTCH------HH--------H--------------------HHHHHHHHHCSSSCCCHHHHHHH
T ss_pred ----HHHHHHHHHHHHcCCc------cH--------H--------------------HHHHHHHHcCCCcccCHHHHHHH
Confidence 00000 00000000 00 0 00000 00114678888888
Q ss_pred HHHHHHHHHHhcCCCchHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHc---
Q 011759 215 LDVARAIAEKHWGDSMEKVDILSALAEVALE----REDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI--- 287 (478)
Q Consensus 215 Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le----~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~--- 287 (478)
|+.|..+ ....++.+||.++.. .+++++|+.+|++++++. + +.++++||.+|..
T Consensus 137 ~~~a~~~---------~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~-------~---~~a~~~lg~~~~~g~~ 197 (273)
T 1ouv_A 137 FTKACDL---------NDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK-------D---SPGCFNAGNMYHHGEG 197 (273)
T ss_dssp HHHHHHT---------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-------C---HHHHHHHHHHHHHTCS
T ss_pred HHHHHhc---------CcHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC-------C---HHHHHHHHHHHHcCCC
Confidence 8887752 246799999999999 999999999999999761 2 5899999999999
Q ss_pred -CCCchHHHHHHHHHHHHH
Q 011759 288 -GSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 288 -~~~~eeAl~~~ekAL~I~ 305 (478)
.+++++|+.+|++++++-
T Consensus 198 ~~~~~~~A~~~~~~a~~~~ 216 (273)
T 1ouv_A 198 ATKNFKEALARYSKACELE 216 (273)
T ss_dssp SCCCHHHHHHHHHHHHHTT
T ss_pred CCccHHHHHHHHHHHHhCC
Confidence 999999999999999763
No 127
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.01 E-value=8.3e-09 Score=89.25 Aligned_cols=102 Identities=13% Similarity=0.129 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCC
Q 011759 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (478)
Q Consensus 65 ~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~ 144 (478)
.+..++.+|..++..|+|++|+.+|.+++.+ +|....+|+.+|.+|+..
T Consensus 17 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~----------------------- 65 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAGKWDDAQKIFQALCML--------DHYDARYFLGLGACRQSL----------------------- 65 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT-----------------------
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHH-----------------------
Confidence 4678899999999999999999999999998 789999999999999875
Q ss_pred CccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011759 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (478)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek 224 (478)
++++.|...|+.|+.+.
T Consensus 66 -------------------------------------------------------------g~~~~A~~~~~~al~~~-- 82 (142)
T 2xcb_A 66 -------------------------------------------------------------GLYEQALQSYSYGALMD-- 82 (142)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHC--
T ss_pred -------------------------------------------------------------hhHHHHHHHHHHHHhcC--
Confidence 35777888888887652
Q ss_pred hcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 011759 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILER 265 (478)
Q Consensus 225 ~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~ 265 (478)
+....+|.+||.++...|+|++|+.+|++++.+...
T Consensus 83 -----p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 118 (142)
T 2xcb_A 83 -----INEPRFPFHAAECHLQLGDLDGAESGFYSARALAAA 118 (142)
T ss_dssp -----TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred -----CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 345678999999999999999999999999999863
No 128
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.00 E-value=4.4e-09 Score=88.48 Aligned_cols=86 Identities=21% Similarity=0.109 Sum_probs=73.4
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|..+|..++.+. +....+|.+||.+++.+++|++|+.+|++++.+... .+.+|++||.+|
T Consensus 23 ~~~~~A~~~~~~al~~~-------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~--------~~~~~~~l~~~~ 87 (137)
T 3q49_B 23 RKYPEAAACYGRAITRN-------PLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ--------SVKAHFFLGQCQ 87 (137)
T ss_dssp TCHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--------CHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhC-------cCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCch--------hHHHHHHHHHHH
Confidence 45777888887777652 345789999999999999999999999999997532 357999999999
Q ss_pred HcCCCchHHHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISVCK 306 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I~k 306 (478)
...|++++|+.+|++++.+..
T Consensus 88 ~~~~~~~~A~~~~~~a~~~~p 108 (137)
T 3q49_B 88 LEMESYDEAIANLQRAYSLAK 108 (137)
T ss_dssp HHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHCh
Confidence 999999999999999998744
No 129
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.00 E-value=8e-10 Score=121.25 Aligned_cols=129 Identities=16% Similarity=0.055 Sum_probs=107.5
Q ss_pred HHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCCccccccccCCC
Q 011759 77 LKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNAVNGE 156 (478)
Q Consensus 77 ~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~de~~~~~~~~e 156 (478)
+..|+|++|+++|.++++......+..+|..+.+|+.+|.+|+..
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~----------------------------------- 446 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDL----------------------------------- 446 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHH-----------------------------------
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhc-----------------------------------
Confidence 889999999999999995554556667899999999999999976
Q ss_pred CCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCCCchHHHHH
Q 011759 157 SSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSMEKVDIL 236 (478)
Q Consensus 157 ~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~ 236 (478)
++++.|...|+.|+.+ .+..+.+|
T Consensus 447 -------------------------------------------------g~~~~A~~~~~~al~~-------~p~~~~a~ 470 (681)
T 2pzi_A 447 -------------------------------------------------GDVAKATRKLDDLAER-------VGWRWRLV 470 (681)
T ss_dssp -------------------------------------------------TCHHHHHHHHHHHHHH-------HCCCHHHH
T ss_pred -------------------------------------------------CCHHHHHHHHHHHhcc-------CcchHHHH
Confidence 3567777777777765 24568899
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Q 011759 237 SALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 237 ~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~ 305 (478)
+++|.+++.+|+|++|+.+|++||++.... +.+|++||.+|..+|+|++ +.+|++||++-
T Consensus 471 ~~lg~~~~~~g~~~~A~~~~~~al~l~P~~--------~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~ 530 (681)
T 2pzi_A 471 WYRAVAELLTGDYDSATKHFTEVLDTFPGE--------LAPKLALAATAELAGNTDE-HKFYQTVWSTN 530 (681)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHSTTC--------SHHHHHHHHHHHHHTCCCT-TCHHHHHHHHC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--------hHHHHHHHHHHHHcCChHH-HHHHHHHHHhC
Confidence 999999999999999999999999987544 5899999999999999999 99999999864
No 130
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.99 E-value=1.3e-09 Score=115.40 Aligned_cols=120 Identities=13% Similarity=0.039 Sum_probs=86.0
Q ss_pred cCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCCccccccccCCCCC
Q 011759 79 ESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNAVNGESS 158 (478)
Q Consensus 79 ~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~de~~~~~~~~e~a 158 (478)
.|+|++|+.+|.+++++ +|..+.+|+.+|.+++..
T Consensus 2 ~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~------------------------------------- 36 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRH--------RPQDFVAWLMLADAELGM------------------------------------- 36 (568)
T ss_dssp ---------------------------CCHHHHHHHHHHHHHH-------------------------------------
T ss_pred CccHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHc-------------------------------------
Confidence 47999999999999987 688899999999999876
Q ss_pred ccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHH
Q 011759 159 TASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSA 238 (478)
Q Consensus 159 ~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~ 238 (478)
++++.|.+.|+.|+.+ .+..+.+|.+
T Consensus 37 -----------------------------------------------g~~~~A~~~~~~al~~-------~p~~~~~~~~ 62 (568)
T 2vsy_A 37 -----------------------------------------------GDTTAGEMAVQRGLAL-------HPGHPEAVAR 62 (568)
T ss_dssp -----------------------------------------------TCHHHHHHHHHHHHTT-------STTCHHHHHH
T ss_pred -----------------------------------------------CCHHHHHHHHHHHHHh-------CCCCHHHHHH
Confidence 3456666666666543 4566889999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Q 011759 239 LAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 239 LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~ 305 (478)
||.++..+|+|++|+.+|++++++.. + .+.+|++||.+|...|++++|+.+|++++++.
T Consensus 63 lg~~~~~~g~~~~A~~~~~~al~~~p-----~---~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 121 (568)
T 2vsy_A 63 LGRVRWTQQRHAEAAVLLQQASDAAP-----E---HPGIALWLGHALEDAGQAEAAAAAYTRAHQLL 121 (568)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCT-----T---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhcCC-----C---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 99999999999999999999999743 2 26899999999999999999999999999874
No 131
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.98 E-value=7.7e-09 Score=83.21 Aligned_cols=116 Identities=20% Similarity=0.166 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCC
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~ 143 (478)
..+..++.+|..++..|+|++|+.+|.+++.+ .|....+++.+|.+++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~a~~~~~~---------------------- 51 (118)
T 1elw_A 2 EQVNELKEKGNKALSVGNIDDALQCYSEAIKL--------DPHNHVLYSNRSAAYAKK---------------------- 51 (118)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHH----------------------
T ss_pred chHHHHHHHHHHHHHcccHHHHHHHHHHHHHH--------CCCcHHHHHHHHHHHHhh----------------------
Confidence 35778999999999999999999999999997 577788999999999875
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
++++.|...++.++.+
T Consensus 52 --------------------------------------------------------------~~~~~A~~~~~~~~~~-- 67 (118)
T 1elw_A 52 --------------------------------------------------------------GDYQKAYEDGCKTVDL-- 67 (118)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHH--
T ss_pred --------------------------------------------------------------ccHHHHHHHHHHHHHh--
Confidence 3466777777777655
Q ss_pred HhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 011759 224 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 286 (478)
Q Consensus 224 k~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~ 286 (478)
.+....+|..+|.++...|+|++|+..|++++.+.. ++ ..+++.|+.+..
T Consensus 68 -----~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-----~~---~~~~~~l~~~~~ 117 (118)
T 1elw_A 68 -----KPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEA-----NN---PQLKEGLQNMEA 117 (118)
T ss_dssp -----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT-----TC---HHHHHHHHHHHH
T ss_pred -----CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCC-----CC---HHHHHHHHHhhc
Confidence 234578999999999999999999999999987632 33 366777776653
No 132
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.98 E-value=1.9e-08 Score=100.79 Aligned_cols=151 Identities=10% Similarity=0.007 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCCcc
Q 011759 68 ELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDD 147 (478)
Q Consensus 68 ~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~de 147 (478)
.+..+|..+...|+|+.|+.+|.+++.+...... .+..+.+++++|.+++..
T Consensus 97 ~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~la~~~~~~-------------------------- 148 (434)
T 4b4t_Q 97 LKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKR--VFLKHSLSIKLATLHYQK-------------------------- 148 (434)
T ss_dssp HHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSC--CSSHHHHHHHHHHHHHHH--------------------------
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCc--cHHHHHHHHHHHHHHHHc--------------------------
Confidence 3445677777789999999999999999876643 456789999999999875
Q ss_pred ccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcC
Q 011759 148 SVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWG 227 (478)
Q Consensus 148 ~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~l~ 227 (478)
+++..|..+|..++.++.+. .
T Consensus 149 ----------------------------------------------------------g~~~~A~~~l~~~~~~~~~~-~ 169 (434)
T 4b4t_Q 149 ----------------------------------------------------------KQYKDSLALINDLLREFKKL-D 169 (434)
T ss_dssp ----------------------------------------------------------TCHHHHHHHHHHHHHHHTTS-S
T ss_pred ----------------------------------------------------------cChHHHHHHHHHHHHHHHhc-c
Confidence 45788899999988877665 3
Q ss_pred CCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH
Q 011759 228 DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCK 306 (478)
Q Consensus 228 ~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k 306 (478)
++...+.+|..+|.+|...++|++|...|++++.+...+. ..++..+..+.++|..|...++|.+|..+|.+++..+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~ 247 (434)
T 4b4t_Q 170 DKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYH 247 (434)
T ss_dssp CSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 4678899999999999999999999999999999998874 34566899999999999999999999999999998764
No 133
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.97 E-value=1.2e-09 Score=114.50 Aligned_cols=148 Identities=14% Similarity=0.069 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHHHc---------CCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCc
Q 011759 66 ADELMEKGTNALKE---------SDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKE 136 (478)
Q Consensus 66 A~~L~~~G~~~~~~---------gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~ 136 (478)
+..+..+|..++.. |+|++|+.+|.+|+++ .|..+.+|+++|.+|+.+. +..
T Consensus 170 ~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~~------~~~----- 230 (474)
T 4abn_A 170 KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM--------DVLDGRSWYILGNAYLSLY------FNT----- 230 (474)
T ss_dssp HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHH------HHT-----
T ss_pred HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHH------Hhh-----
Confidence 36678899999999 9999999999999998 7899999999999998761 100
Q ss_pred CCCCCCCCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHH
Q 011759 137 GDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLD 216 (478)
Q Consensus 137 ~e~~~~~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le 216 (478)
+ .+.++++.|.+.|+
T Consensus 231 ----------------------------------------------~-------------------~~~g~~~~A~~~~~ 245 (474)
T 4abn_A 231 ----------------------------------------------G-------------------QNPKISQQALSAYA 245 (474)
T ss_dssp ----------------------------------------------T-------------------CCHHHHHHHHHHHH
T ss_pred ----------------------------------------------c-------------------cccchHHHHHHHHH
Confidence 0 01267888999888
Q ss_pred HHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHH
Q 011759 217 VARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIP 296 (478)
Q Consensus 217 ~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~ 296 (478)
.|+.+.-. ....+.+|.+||.++..+|+|++|+.+|++++++.... ..++++|+.+|...+++++|+.
T Consensus 246 ~al~~~p~----~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~--------~~a~~~l~~~~~~lg~~~eAi~ 313 (474)
T 4abn_A 246 QAEKVDRK----ASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAW--------PEPQQREQQLLEFLSRLTSLLE 313 (474)
T ss_dssp HHHHHCGG----GGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC----cccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHHHHHHHHHHH
Confidence 88876211 12678999999999999999999999999999985432 5899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 011759 297 YCQKAISVCKSRVQRL 312 (478)
Q Consensus 297 ~~ekAL~I~k~rl~~l 312 (478)
.|++. ...++..+
T Consensus 314 ~~~~~---~~~~l~~~ 326 (474)
T 4abn_A 314 SKGKT---KPKKLQSM 326 (474)
T ss_dssp HTTTC---CHHHHHHH
T ss_pred Hhccc---cCccHHHH
Confidence 99876 34454444
No 134
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.97 E-value=8.9e-10 Score=100.19 Aligned_cols=91 Identities=14% Similarity=0.000 Sum_probs=72.2
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCc---------hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSM---------EKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAE 276 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~---------~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAe 276 (478)
++++.|...|..|+.++........ -.+.+|.+||.+++.+|+|++|+.+|+++|.+.. ..+.
T Consensus 52 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p--------~~~~ 123 (198)
T 2fbn_A 52 NEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDK--------NNVK 123 (198)
T ss_dssp TCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST--------TCHH
T ss_pred CCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc--------ccHH
Confidence 3566777777777765433221110 1258999999999999999999999999999832 2368
Q ss_pred HHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 277 LNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 277 a~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
+|+++|.+|...++|++|+.+|++++.+
T Consensus 124 ~~~~lg~~~~~~~~~~~A~~~~~~al~~ 151 (198)
T 2fbn_A 124 ALYKLGVANMYFGFLEEAKENLYKAASL 151 (198)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999976
No 135
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.97 E-value=2e-08 Score=81.39 Aligned_cols=116 Identities=24% Similarity=0.339 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~ 145 (478)
+..++.+|..++..|+|++|+.+|.+++.+ .|....+++.+|.+++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~la~~~~~~------------------------ 56 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPNNAEAWYNLGNAYYKQ------------------------ 56 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CcCcHHHHHHHHHHHHHh------------------------
Confidence 567889999999999999999999999987 567788999999999864
Q ss_pred ccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011759 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (478)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~ 225 (478)
++++.|..+|+.++.+.
T Consensus 57 ------------------------------------------------------------~~~~~A~~~~~~~~~~~--- 73 (125)
T 1na0_A 57 ------------------------------------------------------------GDYDEAIEYYQKALELD--- 73 (125)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHHC---
T ss_pred ------------------------------------------------------------CCHHHHHHHHHHHHHhC---
Confidence 35667777777776542
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcC
Q 011759 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIG 288 (478)
Q Consensus 226 l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~ 288 (478)
+....++..||.++...++|++|+..|++++.+.. ++ ..++++||.++...
T Consensus 74 ----~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-----~~---~~~~~~l~~~~~~~ 124 (125)
T 1na0_A 74 ----PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP-----NN---AEAKQNLGNAKQKQ 124 (125)
T ss_dssp ----TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC---HHHHHHHHHHHHHH
T ss_pred ----CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC-----Cc---HHHHHHHHHHHHhc
Confidence 23467899999999999999999999999998742 22 46888898888654
No 136
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.97 E-value=2.2e-10 Score=119.80 Aligned_cols=127 Identities=14% Similarity=0.049 Sum_probs=105.7
Q ss_pred HcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCCccccccccCCCC
Q 011759 78 KESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNAVNGES 157 (478)
Q Consensus 78 ~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~de~~~~~~~~e~ 157 (478)
..++|++|+++|..++++ .|..+..|+.+|.+|+..
T Consensus 246 ~l~~~~~A~~~~~~~~~~--------~~~~a~~~~~~G~~~~~~------------------------------------ 281 (457)
T 1kt0_A 246 TLKSFEKAKESWEMDTKE--------KLEQAAIVKEKGTVYFKG------------------------------------ 281 (457)
T ss_dssp EEEEEECCCCGGGSCHHH--------HHHHHHHHHHHHHHHHHT------------------------------------
T ss_pred hhhhcccCcchhhcCHHH--------HHHHHHHHHHHHHHHHhC------------------------------------
Confidence 456788899999888887 589999999999999975
Q ss_pred CccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcC--------CC
Q 011759 158 STASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWG--------DS 229 (478)
Q Consensus 158 a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~l~--------~~ 229 (478)
++|+.|...|+.|+.+...... ..
T Consensus 282 ------------------------------------------------g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~ 313 (457)
T 1kt0_A 282 ------------------------------------------------GKYMQAVIQYGKIVSWLEMEYGLSEKESKASE 313 (457)
T ss_dssp ------------------------------------------------TCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHH
T ss_pred ------------------------------------------------CCHHHHHHHHHHHHHHhcccccCChHHHHHHH
Confidence 4577788888888776543311 01
Q ss_pred chHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 230 MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 230 ~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
...+.+|++||.+++.+++|++|+.+|++||.+... .+.+||++|.+|..+++|++|+.+|++||.+
T Consensus 314 ~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~--------~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l 380 (457)
T 1kt0_A 314 SFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSA--------NEKGLYRRGEAQLLMNEFESAKGDFEKVLEV 380 (457)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT--------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc--------cHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 234789999999999999999999999999998543 2689999999999999999999999999976
No 137
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.96 E-value=2e-09 Score=104.77 Aligned_cols=102 Identities=23% Similarity=0.273 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~ 145 (478)
+..+..+|..++..|+|++|+.+|.+|+.+ +|..+.+|+++|.+|+.+
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~------------------------ 51 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITR--------NPLVAVYYTNRALCYLKM------------------------ 51 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSCCHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHh------------------------
Confidence 577899999999999999999999999998 788899999999999875
Q ss_pred ccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011759 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (478)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~ 225 (478)
++++.|...|+.|+.+
T Consensus 52 ------------------------------------------------------------~~~~~A~~~~~~al~~---- 67 (281)
T 2c2l_A 52 ------------------------------------------------------------QQPEQALADCRRALEL---- 67 (281)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHTTS----
T ss_pred ------------------------------------------------------------cCHHHHHHHHHHHHHh----
Confidence 3455666666655533
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 011759 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERM 266 (478)
Q Consensus 226 l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~l 266 (478)
.+....+|++||.++..+|+|++|+.+|++++.+....
T Consensus 68 ---~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 68 ---DGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp ---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred ---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 45668899999999999999999999999999998864
No 138
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.96 E-value=6.6e-09 Score=96.62 Aligned_cols=133 Identities=15% Similarity=0.072 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~ 145 (478)
+..++.+|..++..++|++|+.+|.+|++. ..+.+++++|.+|+.. | +
T Consensus 18 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----------g~~~a~~~lg~~y~~~--------g-~------------- 65 (212)
T 3rjv_A 18 RRAQYYLADTWVSSGDYQKAEYWAQKAAAQ----------GDGDALALLAQLKIRN--------P-Q------------- 65 (212)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHT----------TCHHHHHHHHHHTTSS--------T-T-------------
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----------CCHHHHHHHHHHHHcC--------C-C-------------
Confidence 678899999999999999999999999874 2457899999887631 0 0
Q ss_pred ccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011759 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (478)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~ 225 (478)
..+++.|.++|+.|..
T Consensus 66 -----------------------------------------------------------~~~~~~A~~~~~~A~~----- 81 (212)
T 3rjv_A 66 -----------------------------------------------------------QADYPQARQLAEKAVE----- 81 (212)
T ss_dssp -----------------------------------------------------------SCCHHHHHHHHHHHHH-----
T ss_pred -----------------------------------------------------------CCCHHHHHHHHHHHHH-----
Confidence 0356667777776632
Q ss_pred cCCCchHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHc----CCCchHHHHH
Q 011759 226 WGDSMEKVDILSALAEVALE----REDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI----GSKPQEAIPY 297 (478)
Q Consensus 226 l~~~~~~Ad~~~~LGev~le----~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~----~~~~eeAl~~ 297 (478)
...+.++++||.+|.. .+++++|+..|++|+++-. +...+.++++||.+|.. .+++++|+.+
T Consensus 82 ----~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~------~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~ 151 (212)
T 3rjv_A 82 ----AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSE------SDAAVDAQMLLGLIYASGVHGPEDDVKASEY 151 (212)
T ss_dssp ----TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTT------SHHHHHHHHHHHHHHHHTSSSSCCHHHHHHH
T ss_pred ----CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCC------CcchHHHHHHHHHHHHcCCCCCCCHHHHHHH
Confidence 2346678888888877 7788888888887775421 11346788888888887 6778888888
Q ss_pred HHHHHHH
Q 011759 298 CQKAISV 304 (478)
Q Consensus 298 ~ekAL~I 304 (478)
|++|+++
T Consensus 152 ~~~A~~~ 158 (212)
T 3rjv_A 152 FKGSSSL 158 (212)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 8888765
No 139
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.94 E-value=2.7e-08 Score=97.55 Aligned_cols=154 Identities=14% Similarity=0.103 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCc--cCCCCCCcCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGS 143 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdv--Lg~~~~~~~e~~~~~ 143 (478)
+..++.+|..++..|+|++|+.+|.+ |....+++.+|.+|+.+++.+... |-....
T Consensus 101 ~~~~~~la~~~~~~g~~~~Al~~l~~-------------~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~--------- 158 (291)
T 3mkr_A 101 TTFLLMAASIYFYDQNPDAALRTLHQ-------------GDSLECMAMTVQILLKLDRLDLARKELKKMQD--------- 158 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTT-------------CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHhC-------------CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHh---------
Confidence 45689999999999999999999987 455679999999999986653321 000000
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHH-------HHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWK-------MLD 216 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE-------~Le 216 (478)
.++. ...-.+..+|- -++
T Consensus 159 ---------~~p~----------------------------------------------~~~~~l~~a~~~l~~~~~~~~ 183 (291)
T 3mkr_A 159 ---------QDED----------------------------------------------ATLTQLATAWVSLAAGGEKLQ 183 (291)
T ss_dssp ---------HCTT----------------------------------------------CHHHHHHHHHHHHHHCTTHHH
T ss_pred ---------hCcC----------------------------------------------cHHHHHHHHHHHHHhCchHHH
Confidence 0000 00011222231 124
Q ss_pred HHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchH-HH
Q 011759 217 VARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQE-AI 295 (478)
Q Consensus 217 ~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~ee-Al 295 (478)
.|+.+|.+.+...+..+.+|++||.+++.+|+|++|+.+|+++|.+... + +++|++||.++...|++.+ +.
T Consensus 184 eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~-----~---~~~l~~l~~~~~~~g~~~eaa~ 255 (291)
T 3mkr_A 184 DAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSG-----H---PETLINLVVLSQHLGKPPEVTN 255 (291)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-----C---HHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-----C---HHHHHHHHHHHHHcCCCHHHHH
Confidence 4444554444334556889999999999999999999999999987643 3 5789999999999999987 56
Q ss_pred HHHHHHHHH
Q 011759 296 PYCQKAISV 304 (478)
Q Consensus 296 ~~~ekAL~I 304 (478)
.+|++++++
T Consensus 256 ~~~~~~~~~ 264 (291)
T 3mkr_A 256 RYLSQLKDA 264 (291)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 888888865
No 140
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.94 E-value=5.3e-09 Score=89.15 Aligned_cols=100 Identities=22% Similarity=0.229 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCCc
Q 011759 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKD 146 (478)
Q Consensus 67 ~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~d 146 (478)
..++.+|..++..|+|++|+.+|.+++++ .|.++.+|+.+|.+++..
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~lg~~~~~~------------------------- 64 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQK--------EPEREEAWRSLGLTQAEN------------------------- 64 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHT-------------------------
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHc-------------------------
Confidence 34788999999999999999999999998 899999999999999865
Q ss_pred cccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHhc
Q 011759 147 DSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHW 226 (478)
Q Consensus 147 e~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~l 226 (478)
++++.|...|+.|+.+
T Consensus 65 -----------------------------------------------------------g~~~~A~~~~~~al~l----- 80 (121)
T 1hxi_A 65 -----------------------------------------------------------EKDGLAIIALNHARML----- 80 (121)
T ss_dssp -----------------------------------------------------------TCHHHHHHHHHHHHHH-----
T ss_pred -----------------------------------------------------------CCHHHHHHHHHHHHHh-----
Confidence 3466677777777665
Q ss_pred CCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 011759 227 GDSMEKVDILSALAEVALEREDIETSLSDYQKALTILER 265 (478)
Q Consensus 227 ~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~ 265 (478)
.+....+|..||.++...|+|++|+..|+++|++...
T Consensus 81 --~P~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~ 117 (121)
T 1hxi_A 81 --DPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQ 117 (121)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred --CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC
Confidence 3456789999999999999999999999999987654
No 141
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.90 E-value=1.4e-08 Score=84.46 Aligned_cols=90 Identities=13% Similarity=0.076 Sum_probs=75.5
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|...|+.++.++ ........++..||.+++..|+|++|+..|++++.+. |+++.+..++++||.+|
T Consensus 16 ~~~~~A~~~~~~~~~~~----p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~-----p~~~~~~~~~~~la~~~ 86 (129)
T 2xev_A 16 GKYDDASQLFLSFLELY----PNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRY-----PTHDKAAGGLLKLGLSQ 86 (129)
T ss_dssp TCHHHHHHHHHHHHHHC----SSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTSTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHC----CCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHC-----CCCcccHHHHHHHHHHH
Confidence 56777887777766543 2234566899999999999999999999999999864 56667789999999999
Q ss_pred HcCCCchHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I 304 (478)
...|++++|+.+|++++..
T Consensus 87 ~~~g~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 87 YGEGKNTEAQQTLQQVATQ 105 (129)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHH
Confidence 9999999999999998875
No 142
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.89 E-value=1.8e-08 Score=84.95 Aligned_cols=118 Identities=15% Similarity=0.140 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCC
Q 011759 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (478)
Q Consensus 65 ~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~ 144 (478)
.+..++.+|..++..|+|++|+.+|.+++++ .+.++....+|+++|.+++..
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~-----~~~~~~~~~~~~~~a~~~~~~----------------------- 78 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGL-----DATPQDQAVLHRNRAACHLKL----------------------- 78 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHT-----------------------
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-----cccchHHHHHHHHHHHHHHHH-----------------------
Confidence 3788999999999999999999999999986 222333489999999999865
Q ss_pred CccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011759 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (478)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek 224 (478)
++++.|...|+.++.+
T Consensus 79 -------------------------------------------------------------~~~~~A~~~~~~~~~~--- 94 (148)
T 2dba_A 79 -------------------------------------------------------------EDYDKAETEASKAIEK--- 94 (148)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHH---
T ss_pred -------------------------------------------------------------ccHHHHHHHHHHHHhh---
Confidence 3577788888877765
Q ss_pred hcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 011759 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 286 (478)
Q Consensus 225 ~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~ 286 (478)
.+....+|..+|.++...++|++|+.+|++++.+.. +++ .++..|+.+..
T Consensus 95 ----~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p-----~~~---~~~~~l~~~~~ 144 (148)
T 2dba_A 95 ----DGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEP-----KNK---VFQEALRNISG 144 (148)
T ss_dssp ----TSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCS-----SCH---HHHHHHHHHHC
T ss_pred ----CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC-----CcH---HHHHHHHHHHh
Confidence 234578999999999999999999999999998743 333 45555555544
No 143
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.88 E-value=5.6e-08 Score=80.79 Aligned_cols=118 Identities=18% Similarity=0.121 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCCc
Q 011759 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKD 146 (478)
Q Consensus 67 ~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~d 146 (478)
..++.+|..++..|+|++|+.+|.+++++ .+.++....+++++|.+++..
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~~~~~~~~lg~~~~~~------------------------- 52 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLEL-----YPNGVYTPNALYWLGESYYAT------------------------- 52 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSSSTTHHHHHHHHHHHHHHT-------------------------
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHHh-------------------------
Confidence 35788999999999999999999999886 245666668999999999865
Q ss_pred cccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHhc
Q 011759 147 DSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHW 226 (478)
Q Consensus 147 e~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~l 226 (478)
++++.|...|+.++.++-
T Consensus 53 -----------------------------------------------------------~~~~~A~~~~~~~~~~~p--- 70 (129)
T 2xev_A 53 -----------------------------------------------------------RNFQLAEAQFRDLVSRYP--- 70 (129)
T ss_dssp -----------------------------------------------------------TCHHHHHHHHHHHHHHCT---
T ss_pred -----------------------------------------------------------ccHHHHHHHHHHHHHHCC---
Confidence 457778888887776532
Q ss_pred CCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 011759 227 GDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC 282 (478)
Q Consensus 227 ~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG 282 (478)
.......++..||.++..+|+|++|+..|++++.+. |+++....+...|.
T Consensus 71 -~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~-----p~~~~~~~a~~~l~ 120 (129)
T 2xev_A 71 -THDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQY-----PGSDAARVAQERLQ 120 (129)
T ss_dssp -TSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----TTSHHHHHHHHHHH
T ss_pred -CCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-----CCChHHHHHHHHHH
Confidence 233458899999999999999999999999999865 45554444444443
No 144
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.87 E-value=3.1e-09 Score=97.49 Aligned_cols=99 Identities=11% Similarity=0.002 Sum_probs=80.3
Q ss_pred HcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCCccccccccCCCC
Q 011759 78 KESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNAVNGES 157 (478)
Q Consensus 78 ~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~de~~~~~~~~e~ 157 (478)
..+.|++|+.+|.+|+++ +|..+++|+++|.+|+.+++.+.+
T Consensus 14 r~~~feeA~~~~~~Ai~l--------~P~~aea~~n~G~~l~~l~~~~~g------------------------------ 55 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKS--------NPLDADNLTRWGGVLLELSQFHSI------------------------------ 55 (158)
T ss_dssp HHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHHSCH------------------------------
T ss_pred HHhHHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHhcccchh------------------------------
Confidence 456799999999999999 899999999999999998765310
Q ss_pred CccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCCCchHHHHHH
Q 011759 158 STASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSMEKVDILS 237 (478)
Q Consensus 158 a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~ 237 (478)
..|.++++.|+..|++.+.-.++.+++|+
T Consensus 56 ---------------------------------------------------~~al~~~~eAi~~le~AL~ldP~~~~A~~ 84 (158)
T 1zu2_A 56 ---------------------------------------------------SDAKQMIQEAITKFEEALLIDPKKDEAVW 84 (158)
T ss_dssp ---------------------------------------------------HHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred ---------------------------------------------------hhhHhHHHHHHHHHHHHHHhCcCcHHHHH
Confidence 11445566666666666554678899999
Q ss_pred HHHHHHHhcC-----------CHHHHHHHHHHHHHHHHH
Q 011759 238 ALAEVALERE-----------DIETSLSDYQKALTILER 265 (478)
Q Consensus 238 ~LGev~le~g-----------~feeAl~dy~kAL~I~~~ 265 (478)
+||.+|..+| +|++|+.+|++||+|...
T Consensus 85 ~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~ 123 (158)
T 1zu2_A 85 CIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPD 123 (158)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCC
Confidence 9999999885 899999999999999764
No 145
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.87 E-value=9.2e-09 Score=91.34 Aligned_cols=135 Identities=14% Similarity=0.152 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~ 145 (478)
+..+..+|..++..|+|++|+.+|.+++.+ .|....+++.+|.++...++.+...-.. .
T Consensus 39 ~~~~~~la~~~~~~~~~~~a~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~--~----------- 97 (184)
T 3vtx_A 39 VETLLKLGKTYMDIGLPNDAIESLKKFVVL--------DTTSAEAYYILGSANFMIDEKQAAIDAL--Q----------- 97 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHTTCHHHHHHHH--H-----------
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--------CchhHHHHHHHHHHHHHcCCHHHHHHHH--H-----------
Confidence 678999999999999999999999999987 6888899999999998875442211000 0
Q ss_pred ccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011759 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (478)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~ 225 (478)
.... ..+... .. . -..+......++++.|.+.|+.++.+
T Consensus 98 -~a~~--~~~~~~------~~--------~--------------------~~lg~~~~~~g~~~~A~~~~~~~l~~---- 136 (184)
T 3vtx_A 98 -RAIA--LNTVYA------DA--------Y--------------------YKLGLVYDSMGEHDKAIEAYEKTISI---- 136 (184)
T ss_dssp -HHHH--HCTTCH------HH--------H--------------------HHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred -HHHH--hCccch------HH--------H--------------------HHHHHHHHHhCCchhHHHHHHHHHHh----
Confidence 0000 000000 00 0 00000011234566666666655544
Q ss_pred cCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 011759 226 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILER 265 (478)
Q Consensus 226 l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~ 265 (478)
.+..+.+|.+||.++..+|+|++|+.+|++||++.+.
T Consensus 137 ---~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 173 (184)
T 3vtx_A 137 ---KPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEK 173 (184)
T ss_dssp ---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHH
T ss_pred ---cchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCcc
Confidence 4567889999999999999999999999999998654
No 146
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.86 E-value=1.8e-08 Score=83.24 Aligned_cols=84 Identities=18% Similarity=0.125 Sum_probs=68.3
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 011759 207 DLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 286 (478)
Q Consensus 207 dle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~ 286 (478)
+++.|.++|+.++. ..+....++..||.++...++|++|+.+|++++.+.. ..+.++++||.+|.
T Consensus 31 ~~~~A~~~~~~al~-------~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~--------~~~~~~~~la~~~~ 95 (133)
T 2lni_A 31 DYPQAMKHYTEAIK-------RNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEP--------TFIKGYTRKAAALE 95 (133)
T ss_dssp CSHHHHHHHHHHHT-------TCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-------cCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC--------CchHHHHHHHHHHH
Confidence 34455555555543 3345588999999999999999999999999998743 23578999999999
Q ss_pred cCCCchHHHHHHHHHHHHH
Q 011759 287 IGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 287 ~~~~~eeAl~~~ekAL~I~ 305 (478)
..+++++|+.+|++++.+.
T Consensus 96 ~~~~~~~A~~~~~~~~~~~ 114 (133)
T 2lni_A 96 AMKDYTKAMDVYQKALDLD 114 (133)
T ss_dssp HTTCHHHHHHHHHHHHHHC
T ss_pred HHhhHHHHHHHHHHHHHhC
Confidence 9999999999999999763
No 147
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.82 E-value=6e-08 Score=95.01 Aligned_cols=168 Identities=12% Similarity=0.034 Sum_probs=112.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCc--cCCCCCCcCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGS 143 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdv--Lg~~~~~~~e~~~~~ 143 (478)
...+..++..+...+++++|+..|.+.+.. ..+|....+++.+|.+|+..++.+... |.. +
T Consensus 65 ~~a~~~la~~~~~~~~~~~A~~~l~~ll~~------~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~-~---------- 127 (291)
T 3mkr_A 65 LQAVRMFAEYLASHSRRDAIVAELDREMSR------SVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ-G---------- 127 (291)
T ss_dssp HHHHHHHHHHHHCSTTHHHHHHHHHHHHHS------CCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT-C----------
T ss_pred HHHHHHHHHHHcCCCcHHHHHHHHHHHHhc------ccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC-C----------
Confidence 566677888888999999999999998864 236888999999999999987664321 100 0
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
.+. .. - -..+......++++.|...|+.++.+.
T Consensus 128 ------------~~~------~~-----------~-----------------~~l~~~~~~~g~~~~A~~~l~~~~~~~- 160 (291)
T 3mkr_A 128 ------------DSL------EC-----------M-----------------AMTVQILLKLDRLDLARKELKKMQDQD- 160 (291)
T ss_dssp ------------CSH------HH-----------H-----------------HHHHHHHHHTTCHHHHHHHHHHHHHHC-
T ss_pred ------------CCH------HH-----------H-----------------HHHHHHHHHCCCHHHHHHHHHHHHhhC-
Confidence 000 00 0 000000112356777777777776552
Q ss_pred HhcCCC-chHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHH
Q 011759 224 KHWGDS-MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (478)
Q Consensus 224 k~l~~~-~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL 302 (478)
++.. ..++.+| ..++...|+|++|+..|++++.+. |++ +.+|++||.+|...|++++|+.+|+++|
T Consensus 161 --p~~~~~~l~~a~---~~l~~~~~~~~eA~~~~~~~l~~~-----p~~---~~~~~~la~~~~~~g~~~eA~~~l~~al 227 (291)
T 3mkr_A 161 --EDATLTQLATAW---VSLAAGGEKLQDAYYIFQEMADKC-----SPT---LLLLNGQAACHMAQGRWEAAEGVLQEAL 227 (291)
T ss_dssp --TTCHHHHHHHHH---HHHHHCTTHHHHHHHHHHHHHHHS-----CCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred --cCcHHHHHHHHH---HHHHhCchHHHHHHHHHHHHHHhC-----CCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 1110 1122222 233456699999999999999872 233 5799999999999999999999999999
Q ss_pred HHHHHHHH
Q 011759 303 SVCKSRVQ 310 (478)
Q Consensus 303 ~I~k~rl~ 310 (478)
.+......
T Consensus 228 ~~~p~~~~ 235 (291)
T 3mkr_A 228 DKDSGHPE 235 (291)
T ss_dssp HHCTTCHH
T ss_pred HhCCCCHH
Confidence 97554333
No 148
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.81 E-value=2.3e-09 Score=98.29 Aligned_cols=84 Identities=19% Similarity=0.203 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCH----------HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 011759 214 MLDVARAIAEKHWGDSMEKVDILSALAEVALEREDI----------ETSLSDYQKALTILERMVEPDSRHIAELNFRICL 283 (478)
Q Consensus 214 ~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~f----------eeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ 283 (478)
.|+.|+..|.+.....+..+++|+++|.++++.++| ++||..|++||+|.... +.+||+||.
T Consensus 17 ~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~--------~~A~~~LG~ 88 (158)
T 1zu2_A 17 LFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKK--------DEAVWCIGN 88 (158)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTC--------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCc--------HHHHHHHHH
Confidence 345555555555444677899999999999999886 59999999999997654 699999999
Q ss_pred HHHcCC-----------CchHHHHHHHHHHHHH
Q 011759 284 CLEIGS-----------KPQEAIPYCQKAISVC 305 (478)
Q Consensus 284 ay~~~~-----------~~eeAl~~~ekAL~I~ 305 (478)
+|..++ +|++|+.+|++||++-
T Consensus 89 ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~ 121 (158)
T 1zu2_A 89 AYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQ 121 (158)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhcccCcchhhhhccHHHHHHHHHHHHHhC
Confidence 999875 8999999999999873
No 149
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.81 E-value=6.4e-08 Score=78.30 Aligned_cols=84 Identities=25% Similarity=0.316 Sum_probs=70.0
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|.++|+.++.+. +....++..||.++...|+|++|+..|++++.+. +.+ ..++++||.+|
T Consensus 23 ~~~~~A~~~~~~~~~~~-------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-----~~~---~~~~~~la~~~ 87 (125)
T 1na0_A 23 GDYDEAIEYYQKALELD-------PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-----PNN---AEAWYNLGNAY 87 (125)
T ss_dssp TCHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTC---HHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHC-------cCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-----Ccc---HHHHHHHHHHH
Confidence 45677777777776542 2346789999999999999999999999999863 222 57899999999
Q ss_pred HcCCCchHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I 304 (478)
...+++++|+.+|++++.+
T Consensus 88 ~~~~~~~~A~~~~~~~~~~ 106 (125)
T 1na0_A 88 YKQGDYDEAIEYYQKALEL 106 (125)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHh
Confidence 9999999999999999876
No 150
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.81 E-value=7.2e-08 Score=78.66 Aligned_cols=85 Identities=19% Similarity=0.207 Sum_probs=71.0
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|.+.|+.++.+ .+..+.++..+|.++...++|++|+.+|++++.+. +++ ..+++++|.+|
T Consensus 26 ~~~~~A~~~~~~~~~~-------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-----~~~---~~~~~~~~~~~ 90 (131)
T 2vyi_A 26 ENFEAAVHFYGKAIEL-------NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICID-----PAY---SKAYGRMGLAL 90 (131)
T ss_dssp TCHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTC---HHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHc-------CCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcC-----ccC---HHHHHHHHHHH
Confidence 4567777777777654 23447899999999999999999999999999873 222 57899999999
Q ss_pred HcCCCchHHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I~ 305 (478)
...+++++|+.+|++++.+.
T Consensus 91 ~~~~~~~~A~~~~~~~~~~~ 110 (131)
T 2vyi_A 91 SSLNKHVEAVAYYKKALELD 110 (131)
T ss_dssp HHTTCHHHHHHHHHHHHHHS
T ss_pred HHhCCHHHHHHHHHHHHhcC
Confidence 99999999999999999763
No 151
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.81 E-value=7.1e-09 Score=86.74 Aligned_cols=88 Identities=9% Similarity=-0.013 Sum_probs=69.6
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|...|+.|+.+. ...+..+.+|.+||.++..+|+|++|+..|+++|++.. ++ +.+|++||.+|
T Consensus 4 g~~~~A~~~~~~al~~~----~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p-----~~---~~~~~~l~~~~ 71 (117)
T 3k9i_A 4 GLEAQAVPYYEKAIASG----LQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFP-----NH---QALRVFYAMVL 71 (117)
T ss_dssp ---CCCHHHHHHHHSSC----CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC---HHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcC----CCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----Cc---hHHHHHHHHHH
Confidence 34555665565555421 01367889999999999999999999999999998843 22 68999999999
Q ss_pred HcCCCchHHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I~ 305 (478)
...|++++|+.+|++++.+.
T Consensus 72 ~~~g~~~~A~~~~~~al~~~ 91 (117)
T 3k9i_A 72 YNLGRYEQGVELLLKIIAET 91 (117)
T ss_dssp HHHTCHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhC
Confidence 99999999999999999763
No 152
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.79 E-value=8.4e-08 Score=82.39 Aligned_cols=84 Identities=15% Similarity=0.076 Sum_probs=71.5
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|...|+.++.+. +....+|..+|.++...|+|++|+.+|++++.+.. ..+.+|+++|.+|
T Consensus 27 ~~~~~A~~~~~~al~~~-------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~--------~~~~~~~~~a~~~ 91 (166)
T 1a17_A 27 KDYENAIKFYSQAIELN-------PSNAIYYGNRSLAYLRTECYGYALGDATRAIELDK--------KYIKGYYRRAASN 91 (166)
T ss_dssp TCHHHHHHHHHHHHHHS-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhC-------CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc--------ccHHHHHHHHHHH
Confidence 45777777777777652 34578999999999999999999999999999843 2358999999999
Q ss_pred HcCCCchHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I 304 (478)
...|++++|+.+|++++.+
T Consensus 92 ~~~~~~~~A~~~~~~a~~~ 110 (166)
T 1a17_A 92 MALGKFRAALRDYETVVKV 110 (166)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHh
Confidence 9999999999999999976
No 153
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.78 E-value=1.2e-08 Score=81.48 Aligned_cols=85 Identities=13% Similarity=0.053 Sum_probs=70.1
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|...|+.++.+. +....+|..+|.++...|+|++|+.+|++++.+... .....++++||.+|
T Consensus 20 ~~~~~A~~~~~~a~~~~-------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~~~l~~~~ 86 (112)
T 2kck_A 20 GNYTESIDLFEKAIQLD-------PEESKYWLMKGKALYNLERYEEAVDCYNYVINVIED------EYNKDVWAAKADAL 86 (112)
T ss_dssp CCHHHHHHHHHHHHHHC-------CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC------TTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhC-------cCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc------cchHHHHHHHHHHH
Confidence 56777887777776652 345678999999999999999999999999987422 11358899999999
Q ss_pred HcC-CCchHHHHHHHHHHH
Q 011759 286 EIG-SKPQEAIPYCQKAIS 303 (478)
Q Consensus 286 ~~~-~~~eeAl~~~ekAL~ 303 (478)
... +++++|+.+|++++.
T Consensus 87 ~~~~~~~~~A~~~~~~~~~ 105 (112)
T 2kck_A 87 RYIEGKEVEAEIAEARAKL 105 (112)
T ss_dssp TTCSSCSHHHHHHHHHHGG
T ss_pred HHHhCCHHHHHHHHHHHhh
Confidence 999 999999999998875
No 154
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.76 E-value=4.6e-08 Score=82.44 Aligned_cols=88 Identities=17% Similarity=0.142 Sum_probs=68.7
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|..+|+.++.+. ........+|.+||.++...++|++|+.+|++++.+.. ++ ..+|+++|.+|
T Consensus 42 ~~~~~A~~~~~~a~~~~----~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-----~~---~~~~~~~a~~~ 109 (148)
T 2dba_A 42 GDYGGALAAYTQALGLD----ATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDG-----GD---VKALYRRSQAL 109 (148)
T ss_dssp TCHHHHHHHHHHHHTSC----CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTS-----CC---HHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHc----ccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCc-----cC---HHHHHHHHHHH
Confidence 45555555555444321 11122489999999999999999999999999998732 22 68999999999
Q ss_pred HcCCCchHHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I~ 305 (478)
...+++++|+.+|++++.+.
T Consensus 110 ~~~~~~~~A~~~~~~al~~~ 129 (148)
T 2dba_A 110 EKLGRLDQAVLDLQRCVSLE 129 (148)
T ss_dssp HHHTCHHHHHHHHHHHHHHC
T ss_pred HHcCCHHHHHHHHHHHHHcC
Confidence 99999999999999999863
No 155
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.76 E-value=3.4e-08 Score=81.75 Aligned_cols=80 Identities=11% Similarity=0.061 Sum_probs=67.1
Q ss_pred HHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHH
Q 011759 219 RAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYC 298 (478)
Q Consensus 219 r~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ 298 (478)
+..|.+.+...+..+.+|++||.+++..|+|++|+.+|++++.+.. ..+.+|++||.+|...|++++|+.+|
T Consensus 5 ~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p--------~~~~~~~~la~~~~~~g~~~~A~~~~ 76 (115)
T 2kat_A 5 TERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDP--------TYSVAWKWLGKTLQGQGDRAGARQAW 76 (115)
T ss_dssp HHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCC--------CcHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3444444444456688999999999999999999999999998743 23679999999999999999999999
Q ss_pred HHHHHHHH
Q 011759 299 QKAISVCK 306 (478)
Q Consensus 299 ekAL~I~k 306 (478)
++++.+..
T Consensus 77 ~~al~~~~ 84 (115)
T 2kat_A 77 ESGLAAAQ 84 (115)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcc
Confidence 99998754
No 156
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.75 E-value=1.1e-08 Score=87.06 Aligned_cols=85 Identities=9% Similarity=0.024 Sum_probs=69.6
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|...|+.|+.+ .+..+.+|..||.++...|+|++|+..|+++|++.... ..+|++||.+|
T Consensus 31 g~~~~A~~~~~~al~~-------~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~--------~~~~~~la~~~ 95 (121)
T 1hxi_A 31 ANLAEAALAFEAVCQK-------EPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKD--------IAVHAALAVSH 95 (121)
T ss_dssp TCHHHHHHHHHHHHHH-------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--------HHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH-------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--------HHHHHHHHHHH
Confidence 4555565555555543 45678999999999999999999999999999985432 47999999999
Q ss_pred HcCCCchHHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I~ 305 (478)
...|++++|+.+|+++|.+.
T Consensus 96 ~~~g~~~~A~~~~~~al~~~ 115 (121)
T 1hxi_A 96 TNEHNANAALASLRAWLLSQ 115 (121)
T ss_dssp HHHHHHHHHHHHHHHHHC--
T ss_pred HHcCCHHHHHHHHHHHHHhC
Confidence 99999999999999998764
No 157
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.75 E-value=9.2e-08 Score=76.76 Aligned_cols=84 Identities=15% Similarity=0.108 Sum_probs=70.6
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|...|+.++.+. +....++..+|.++...|+|++|+..|++++.+.. + ...+++++|.+|
T Consensus 18 ~~~~~A~~~~~~~~~~~-------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-----~---~~~~~~~~a~~~ 82 (118)
T 1elw_A 18 GNIDDALQCYSEAIKLD-------PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKP-----D---WGKGYSRKAAAL 82 (118)
T ss_dssp TCHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-----T---CHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHC-------CCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCc-----c---cHHHHHHHHHHH
Confidence 45777777777776542 33477999999999999999999999999998743 2 257899999999
Q ss_pred HcCCCchHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I 304 (478)
...+++++|+.+|++++.+
T Consensus 83 ~~~~~~~~A~~~~~~~~~~ 101 (118)
T 1elw_A 83 EFLNRFEEAKRTYEEGLKH 101 (118)
T ss_dssp HHTTCHHHHHHHHHHHHTT
T ss_pred HHHhhHHHHHHHHHHHHHc
Confidence 9999999999999998865
No 158
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.75 E-value=6.2e-08 Score=87.57 Aligned_cols=107 Identities=18% Similarity=0.147 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~ 145 (478)
+..++.+|..++..|+|++|+.+|.+|+++ +|..+.+|+++|.+++.+
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~~~~~~~~~~lg~~~~~~------------------------ 84 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINR--------DKHLAVAYFQRGMLYYQT------------------------ 84 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT------------------------
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CccchHHHHHHHHHHHHc------------------------
Confidence 467899999999999999999999999998 688899999999999875
Q ss_pred ccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011759 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (478)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~ 225 (478)
++++.|++.|+.++.+....
T Consensus 85 ------------------------------------------------------------~~~~~A~~~~~~al~~~~~~ 104 (213)
T 1hh8_A 85 ------------------------------------------------------------EKYDLAIKDLKEALIQLRGN 104 (213)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHTTTTC
T ss_pred ------------------------------------------------------------ccHHHHHHHHHHHHHhCCCc
Confidence 35677888888887654332
Q ss_pred c---------CCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 011759 226 W---------GDSMEKVDILSALAEVALEREDIETSLSDYQKALTILE 264 (478)
Q Consensus 226 l---------~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~ 264 (478)
. ...+..+.+|.+||.++...|+|++|+.+|++++.+..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p 152 (213)
T 1hh8_A 105 QLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKS 152 (213)
T ss_dssp SEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCC
T ss_pred cHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCc
Confidence 1 02356789999999999999999999999999998754
No 159
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.74 E-value=1e-07 Score=88.47 Aligned_cols=134 Identities=16% Similarity=0.182 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHcC----CHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCC
Q 011759 66 ADELMEKGTNALKES----DYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQ 141 (478)
Q Consensus 66 A~~L~~~G~~~~~~g----dy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~ 141 (478)
+..++.+|..++. + +|++|+.+|.+|++. ..+.+++++|.+|+.- .
T Consensus 50 ~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~----------g~~~a~~~Lg~~y~~g---------~---------- 99 (212)
T 3rjv_A 50 GDALALLAQLKIR-NPQQADYPQARQLAEKAVEA----------GSKSGEIVLARVLVNR---------Q---------- 99 (212)
T ss_dssp HHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHT----------TCHHHHHHHHHHHTCG---------G----------
T ss_pred HHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHC----------CCHHHHHHHHHHHHcC---------C----------
Confidence 5667888988877 7 999999999999763 4567999999988642 0
Q ss_pred CCCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHH
Q 011759 142 GSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAI 221 (478)
Q Consensus 142 ~~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I 221 (478)
....|+..|.++|+.|..+
T Consensus 100 -------------------------------------------------------------g~~~d~~~A~~~~~~A~~~ 118 (212)
T 3rjv_A 100 -------------------------------------------------------------AGATDVAHAITLLQDAARD 118 (212)
T ss_dssp -------------------------------------------------------------GSSCCHHHHHHHHHHHTSS
T ss_pred -------------------------------------------------------------CCccCHHHHHHHHHHHHHc
Confidence 0014566777666666421
Q ss_pred HHHhcCCCchHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcC------CCc
Q 011759 222 AEKHWGDSMEKVDILSALAEVALE----REDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIG------SKP 291 (478)
Q Consensus 222 ~ek~l~~~~~~Ad~~~~LGev~le----~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~------~~~ 291 (478)
++....+.++++||.+|.. ..++++|+..|++|+++. .+ +.++++||.+|... .++
T Consensus 119 -----~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~------~~---~~a~~~Lg~~y~~g~gg~~~~d~ 184 (212)
T 3rjv_A 119 -----SESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSLS------RT---GYAEYWAGMMFQQGEKGFIEPNK 184 (212)
T ss_dssp -----TTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHTS------CT---THHHHHHHHHHHHCBTTTBCCCH
T ss_pred -----CCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHcC------CC---HHHHHHHHHHHHcCCCCCCCCCH
Confidence 1111458999999999999 899999999999998761 11 35899999999864 389
Q ss_pred hHHHHHHHHHHHH
Q 011759 292 QEAIPYCQKAISV 304 (478)
Q Consensus 292 eeAl~~~ekAL~I 304 (478)
++|+.+|++|++.
T Consensus 185 ~~A~~~~~~A~~~ 197 (212)
T 3rjv_A 185 QKALHWLNVSCLE 197 (212)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc
Confidence 9999999999875
No 160
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.74 E-value=1.1e-07 Score=92.66 Aligned_cols=81 Identities=11% Similarity=0.085 Sum_probs=59.4
Q ss_pred HHHHHHHHHhcCCCchHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHH
Q 011759 216 DVARAIAEKHWGDSMEKVDILSALAEVAL-EREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEA 294 (478)
Q Consensus 216 e~Ar~I~ek~l~~~~~~Ad~~~~LGev~l-e~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeA 294 (478)
+.|+.+|.+.+...+....+|..++.+.. ..|++++|+..|+++|++... + +.+|+++|..+...|++++|
T Consensus 151 ~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~-----~---~~~~~~~~~~~~~~g~~~~A 222 (308)
T 2ond_A 151 KSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGD-----I---PEYVLAYIDYLSHLNEDNNT 222 (308)
T ss_dssp HHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTT-----C---HHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-----c---HHHHHHHHHHHHHCCCHHHH
Confidence 44455555554433344566666665543 379999999999999987643 2 57889999999999999999
Q ss_pred HHHHHHHHHH
Q 011759 295 IPYCQKAISV 304 (478)
Q Consensus 295 l~~~ekAL~I 304 (478)
+.+|++|+..
T Consensus 223 ~~~~~~al~~ 232 (308)
T 2ond_A 223 RVLFERVLTS 232 (308)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHhc
Confidence 9999999873
No 161
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.71 E-value=8.5e-08 Score=97.82 Aligned_cols=91 Identities=13% Similarity=0.062 Sum_probs=76.3
Q ss_pred ChHHHHHHHHHHHHHHHHHhc---------CCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHW---------GDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAE 276 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l---------~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAe 276 (478)
++++.|...|+.|+.++.... ...+..+.+|.+||.+++.+++|++|+.+|+++|++. +..+.
T Consensus 237 g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~--------p~~~~ 308 (370)
T 1ihg_A 237 QNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEID--------PSNTK 308 (370)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC--------TTCHH
T ss_pred cCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhC--------chhHH
Confidence 457778888888888765531 1235678999999999999999999999999999863 23378
Q ss_pred HHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 277 LNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 277 a~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
+||+||.+|..+++|++|+.+|++|+.+
T Consensus 309 a~~~lg~~~~~~g~~~eA~~~l~~Al~l 336 (370)
T 1ihg_A 309 ALYRRAQGWQGLKEYDQALADLKKAQEI 336 (370)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999975
No 162
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.71 E-value=3.6e-08 Score=80.81 Aligned_cols=70 Identities=16% Similarity=0.158 Sum_probs=61.7
Q ss_pred chHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHH
Q 011759 230 MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKS 307 (478)
Q Consensus 230 ~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k~ 307 (478)
+..+.+|+.||.+++..|+|++|+.+|+++|++.... ..+|++||.+|...|++++|+.+|++++.+...
T Consensus 4 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~--------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 4 PEDPFTRYALAQEHLKHDNASRALALFEELVETDPDY--------VGTYYHLGKLYERLDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC--------THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc--------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhc
Confidence 4457899999999999999999999999999985432 469999999999999999999999999988543
No 163
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.68 E-value=5.9e-08 Score=77.39 Aligned_cols=97 Identities=15% Similarity=0.148 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCCc
Q 011759 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKD 146 (478)
Q Consensus 67 ~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~d 146 (478)
..++.+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~~a~~~~~~------------------------- 53 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQL--------DPEESKYWLMKGKALYNL------------------------- 53 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHT-------------------------
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHh--------CcCCHHHHHHHHHHHHHc-------------------------
Confidence 34677899999999999999999999998 577788999999999865
Q ss_pred cccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHhc
Q 011759 147 DSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHW 226 (478)
Q Consensus 147 e~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~l 226 (478)
++++.|.+.|+.++.+
T Consensus 54 -----------------------------------------------------------~~~~~A~~~~~~a~~~----- 69 (112)
T 2kck_A 54 -----------------------------------------------------------ERYEEAVDCYNYVINV----- 69 (112)
T ss_dssp -----------------------------------------------------------TCHHHHHHHHHHHHHT-----
T ss_pred -----------------------------------------------------------cCHHHHHHHHHHHHHh-----
Confidence 3466777777777654
Q ss_pred CCCch--HHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHH
Q 011759 227 GDSME--KVDILSALAEVALER-EDIETSLSDYQKALTI 262 (478)
Q Consensus 227 ~~~~~--~Ad~~~~LGev~le~-g~feeAl~dy~kAL~I 262 (478)
.+. ...++..||.++... |+|++|+.+|++++..
T Consensus 70 --~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~ 106 (112)
T 2kck_A 70 --IEDEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLE 106 (112)
T ss_dssp --SCCTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGG
T ss_pred --CcccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhc
Confidence 234 678999999999999 9999999999998764
No 164
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.67 E-value=8.9e-08 Score=93.04 Aligned_cols=86 Identities=21% Similarity=0.112 Sum_probs=73.7
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|...|+.|+.+ .+..+.+|.+||.++..+|+|++|+.+|++++++.. .-+.+|++||.+|
T Consensus 18 g~~~~A~~~~~~al~~-------~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p--------~~~~~~~~lg~~~ 82 (281)
T 2c2l_A 18 RKYPEAAACYGRAITR-------NPLVAVYYTNRALCYLKMQQPEQALADCRRALELDG--------QSVKAHFFLGQCQ 82 (281)
T ss_dssp TCHHHHHHHHHHHHHH-------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCT--------TCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh-------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC--------CCHHHHHHHHHHH
Confidence 4577788888777765 345678999999999999999999999999998632 2358999999999
Q ss_pred HcCCCchHHHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISVCK 306 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I~k 306 (478)
..+|++++|+.+|++++.+..
T Consensus 83 ~~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 83 LEMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp HHTTCHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCc
Confidence 999999999999999999865
No 165
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.66 E-value=1.6e-07 Score=93.66 Aligned_cols=146 Identities=8% Similarity=-0.023 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~ 145 (478)
-+-.+..+..+...|+|++|.++|..++.. +|... .+|.+|..++..
T Consensus 102 ~dl~LayA~~L~~~g~y~eA~~~l~~~~~~--------~p~~~-~~~~~a~l~~~~------------------------ 148 (282)
T 4f3v_A 102 LAITMGFAACEAAQGNYADAMEALEAAPVA--------GSEHL-VAWMKAVVYGAA------------------------ 148 (282)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHTSSCCT--------TCHHH-HHHHHHHHHHHT------------------------
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--------CCchH-HHHHHHHHHHHc------------------------
Confidence 445567788899999999999999988873 57777 889999877764
Q ss_pred ccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011759 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (478)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~ 225 (478)
.+++.|..+|+ +.
T Consensus 149 ------------------------------------------------------------~r~~dA~~~l~-------~a 161 (282)
T 4f3v_A 149 ------------------------------------------------------------ERWTDVIDQVK-------SA 161 (282)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHT-------TG
T ss_pred ------------------------------------------------------------CCHHHHHHHHH-------Hh
Confidence 23445554444 22
Q ss_pred cCC-Cc-hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChH-HHHHHHHHHHHHHcCCCchHHHHHHHHHH
Q 011759 226 WGD-SM-EKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRH-IAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (478)
Q Consensus 226 l~~-~~-~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~-iAea~~~LG~ay~~~~~~eeAl~~~ekAL 302 (478)
... .+ ....+|+.||.++..+|+|++|+..|++++. ++..|. ..+++|++|+||..+|+.++|+.+|++++
T Consensus 162 ~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~------g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~ 235 (282)
T 4f3v_A 162 GKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEAND------SPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQ 235 (282)
T ss_dssp GGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT------STTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhc------CCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 221 11 2367999999999999999999999999872 333244 77899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 011759 303 SVCKSRVQRLLNEVKSL 319 (478)
Q Consensus 303 ~I~k~rl~~l~~~l~~~ 319 (478)
.+... ......|...
T Consensus 236 a~~P~--~~~~~aL~~~ 250 (282)
T 4f3v_A 236 TTHPE--PKVAAALKDP 250 (282)
T ss_dssp HHSCC--HHHHHHHHCT
T ss_pred hcCCc--HHHHHHHhCC
Confidence 88665 5555555544
No 166
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.66 E-value=1.6e-07 Score=93.49 Aligned_cols=176 Identities=10% Similarity=-0.015 Sum_probs=122.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHH-------HHHHHhhhhccCCccCC---CC
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQY-------GRALLYKAQEEADPLVS---VP 133 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~Y-------G~ALl~~a~~esdvLg~---~~ 133 (478)
+.+..+|..|.-+ ..+|+..|..+|.+|+++ +|.++++|+.+ |.+|..+.+.. +.||. ..
T Consensus 5 ~~~~~~~~~~~~~-~~~d~~~A~~~F~~a~~~--------dP~~~Daw~g~~a~g~~~~~~L~~~~r~~-~a~~~~~~~l 74 (282)
T 4f3v_A 5 DRLASLFESAVSM-LPMSEARSLDLFTEITNY--------DESACDAWIGRIRCGDTDRVTLFRAWYSR-RNFGQLSGSV 74 (282)
T ss_dssp HHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHTTCCCHHHHHHHHHTG-GGTTHHHHTT
T ss_pred HHHHHHHHHHhcc-cCCCHHHHHHHHHHHHHh--------ChhhhHHHHhHHHccCCcHHHHHHHHHHH-HHHHHHHHHh
Confidence 4678899999876 689999999999999999 89999999999 99999998874 33442 11
Q ss_pred CCcCCCCCCCCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHH
Q 011759 134 KKEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWK 213 (478)
Q Consensus 134 ~~~~e~~~~~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE 213 (478)
... ..... ......+-. +|+. ---..-+++-+++-
T Consensus 75 ~l~---------p~~l~-------------a~~~~~g~y-------~~~~----------------~~v~~r~dl~LayA 109 (282)
T 4f3v_A 75 QIS---------MSTLN-------------ARIAIGGLY-------GDIT----------------YPVTSPLAITMGFA 109 (282)
T ss_dssp TCC---------GGGGC-------------CEEECCTTT-------CCCE----------------EECSSHHHHHHHHH
T ss_pred cCC---------hhhhh-------------hhhccCCcc-------cccc----------------cccCCHhHHHHHHH
Confidence 000 00000 000000000 0000 00011245555553
Q ss_pred H-------HHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHH-HHHHHHHHHHH
Q 011759 214 M-------LDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHI-AELNFRICLCL 285 (478)
Q Consensus 214 ~-------Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~i-Aea~~~LG~ay 285 (478)
. |+.|+.+|.......+... +++.+|.++++.++|++|+.+|++++.+- ++.. +.+||+||.+|
T Consensus 110 ~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~-------d~~~~~~a~~~LG~al 181 (282)
T 4f3v_A 110 ACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWP-------DKFLAGAAGVAHGVAA 181 (282)
T ss_dssp HHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCS-------CHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccC-------CcccHHHHHHHHHHHH
Confidence 3 3677788877665556667 99999999999999999999998653321 4433 57999999999
Q ss_pred HcCCCchHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAI 302 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL 302 (478)
..+|++++|+.+|++++
T Consensus 182 ~~LG~~~eAl~~l~~a~ 198 (282)
T 4f3v_A 182 ANLALFTEAERRLTEAN 198 (282)
T ss_dssp HHTTCHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHh
Confidence 99999999999999986
No 167
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.63 E-value=8.9e-08 Score=79.95 Aligned_cols=91 Identities=12% Similarity=0.034 Sum_probs=73.0
Q ss_pred HcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCCccccccccCCCC
Q 011759 78 KESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNAVNGES 157 (478)
Q Consensus 78 ~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~de~~~~~~~~e~ 157 (478)
.+|+|++|+.+|.+|+++ +..+|..+.+|+.+|.+|+.+
T Consensus 2 ~~g~~~~A~~~~~~al~~-----~~~~p~~~~~~~~lg~~~~~~------------------------------------ 40 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIAS-----GLQGKDLAECYLGLGSTFRTL------------------------------------ 40 (117)
T ss_dssp -----CCCHHHHHHHHSS-----CCCHHHHHHHHHHHHHHHHHT------------------------------------
T ss_pred CCCcHHHHHHHHHHHHHc-----CCCCccHHHHHHHHHHHHHHc------------------------------------
Confidence 478999999999999985 223599999999999999875
Q ss_pred CccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCCCchHHHHHH
Q 011759 158 STASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSMEKVDILS 237 (478)
Q Consensus 158 a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~ 237 (478)
++++.|...|+.++.+ .+....+|.
T Consensus 41 ------------------------------------------------~~~~~A~~~~~~al~~-------~p~~~~~~~ 65 (117)
T 3k9i_A 41 ------------------------------------------------GEYRKAEAVLANGVKQ-------FPNHQALRV 65 (117)
T ss_dssp ------------------------------------------------TCHHHHHHHHHHHHHH-------CTTCHHHHH
T ss_pred ------------------------------------------------CCHHHHHHHHHHHHHh-------CCCchHHHH
Confidence 4577788888888765 234588999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 011759 238 ALAEVALEREDIETSLSDYQKALTILE 264 (478)
Q Consensus 238 ~LGev~le~g~feeAl~dy~kAL~I~~ 264 (478)
+||.++..+|+|++|+..|+++|.+..
T Consensus 66 ~l~~~~~~~g~~~~A~~~~~~al~~~p 92 (117)
T 3k9i_A 66 FYAMVLYNLGRYEQGVELLLKIIAETS 92 (117)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 999999999999999999999998753
No 168
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.61 E-value=2.7e-07 Score=89.90 Aligned_cols=31 Identities=10% Similarity=0.118 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhh
Q 011759 83 GEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYK 121 (478)
Q Consensus 83 ~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ 121 (478)
.+|+.+|.+|+.+ +|....+|+.||..+...
T Consensus 33 ~~a~~~~~~al~~--------~p~~~~~w~~~~~~~~~~ 63 (308)
T 2ond_A 33 KRVMFAYEQCLLV--------LGHHPDIWYEAAQYLEQS 63 (308)
T ss_dssp HHHHHHHHHHHHH--------HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHHh
Confidence 7899999999998 589999999999999864
No 169
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.61 E-value=1.2e-07 Score=87.41 Aligned_cols=86 Identities=9% Similarity=0.060 Sum_probs=72.4
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHH----------------HHHHHHhcCCHHHHHHHHHHHHHHHHHhcCC
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSA----------------LAEVALEREDIETSLSDYQKALTILERMVEP 269 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~----------------LGev~le~g~feeAl~dy~kAL~I~~~llg~ 269 (478)
++++.|...|+.++.+ .+..+.+|.. ||.++...|+|++|+.+|+++|++....
T Consensus 18 g~~~~A~~~~~~al~~-------~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~--- 87 (208)
T 3urz_A 18 GQNGQAVSYFRQTIAL-------NIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPNN--- 87 (208)
T ss_dssp TCHHHHHHHHHHHHHH-------CHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---
T ss_pred CCHHHHHHHHHHHHHh-------CCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC---
Confidence 6777887777777655 3445666666 9999999999999999999999985432
Q ss_pred CChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH
Q 011759 270 DSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCK 306 (478)
Q Consensus 270 d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k 306 (478)
+.+|++||.+|...|++++|+.+|+++|++-.
T Consensus 88 -----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P 119 (208)
T 3urz_A 88 -----VDCLEACAEMQVCRGQEKDALRMYEKILQLEA 119 (208)
T ss_dssp -----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred -----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 58999999999999999999999999998754
No 170
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.60 E-value=8.2e-07 Score=78.43 Aligned_cols=100 Identities=20% Similarity=0.264 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHH-hhhhccCCccCCCCCCcCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALL-YKAQEEADPLVSVPKKEGDSQQGSD 144 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl-~~a~~esdvLg~~~~~~~e~~~~~~ 144 (478)
+..++.+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+|+ ..
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~la~~l~~~~----------------------- 92 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQL--------RGENAELYAALATVLYYQA----------------------- 92 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------HCSCHHHHHHHHHHHHHHT-----------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHhc-----------------------
Confidence 567899999999999999999999999998 4677889999999954 33
Q ss_pred CccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChH--HHHHHHHHHHHHHH
Q 011759 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDL--DLAWKMLDVARAIA 222 (478)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddl--e~AwE~Le~Ar~I~ 222 (478)
+++ +.|..+|+.++.+
T Consensus 93 -------------------------------------------------------------~~~~~~~A~~~~~~al~~- 110 (177)
T 2e2e_A 93 -------------------------------------------------------------SQHMTAQTRAMIDKALAL- 110 (177)
T ss_dssp -------------------------------------------------------------TTCCCHHHHHHHHHHHHH-
T ss_pred -------------------------------------------------------------CCcchHHHHHHHHHHHHh-
Confidence 122 5677777777655
Q ss_pred HHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 011759 223 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILE 264 (478)
Q Consensus 223 ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~ 264 (478)
.+....+|..||.++...|+|++|+..|++++.+..
T Consensus 111 ------~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p 146 (177)
T 2e2e_A 111 ------DSNEITALMLLASDAFMQANYAQAIELWQKVMDLNS 146 (177)
T ss_dssp ------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCC
T ss_pred ------CCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCC
Confidence 234568999999999999999999999999998754
No 171
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.59 E-value=1.1e-07 Score=76.75 Aligned_cols=65 Identities=11% Similarity=0.110 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 232 KVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 232 ~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
.+.+|..+|.+++..|+|++|+..|+++|.+.. ++ +.+|++||.+|...|+|++|+.+|++++.+
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p-----~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 67 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQP-----QN---PVGYSNKAMALIKLGEYTQAIQMCQQGLRY 67 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT-----TC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC-----CC---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 478899999999999999999999999999843 22 588999999999999999999999999975
No 172
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.57 E-value=1.2e-07 Score=94.93 Aligned_cols=93 Identities=15% Similarity=0.026 Sum_probs=70.9
Q ss_pred ChHHHHHHHHHHHHHHHHHhcC--CC--------chHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWG--DS--------MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIA 275 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~--~~--------~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iA 275 (478)
++|+.|...|+.|+.+...... .. .-...+|++||.+++.+++|++|+.+|+++|.+.. ..+
T Consensus 193 g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p--------~~~ 264 (338)
T 2if4_A 193 EKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEE--------KNP 264 (338)
T ss_dssp SCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCT--------TCH
T ss_pred CCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------CCH
Confidence 5677777777777765422210 00 00125999999999999999999999999998743 236
Q ss_pred HHHHHHHHHHHcCCCchHHHHHHHHHHHHHH
Q 011759 276 ELNFRICLCLEIGSKPQEAIPYCQKAISVCK 306 (478)
Q Consensus 276 ea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k 306 (478)
.+||+||.+|..+++|++|+.+|++++.+..
T Consensus 265 ~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p 295 (338)
T 2if4_A 265 KALFRRGKAKAELGQMDSARDDFRKAQKYAP 295 (338)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCC
Confidence 8999999999999999999999999997643
No 173
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.55 E-value=1.1e-06 Score=91.09 Aligned_cols=160 Identities=17% Similarity=0.131 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCC
Q 011759 65 FADELMEKGTNALK----ESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQ 140 (478)
Q Consensus 65 ~A~~L~~~G~~~~~----~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~ 140 (478)
.+..++.+|..++. .++|++|+.+|.+|++. | .+.+++.+|..++.- .+|.++.
T Consensus 38 ~~~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~-----~-----~~~a~~~Lg~~y~~g----~g~~~~~-------- 95 (490)
T 2xm6_A 38 EAKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQ-----G-----YTPAEYVLGLRYMNG----EGVPQDY-------- 95 (490)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-----T-----CHHHHHHHHHHHHHT----SSSCCCH--------
T ss_pred CHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHC-----C-----CHHHHHHHHHHHHcC----CCCCCCH--------
Confidence 36788999999998 89999999999999874 2 357999999988762 0111110
Q ss_pred CCCCCccccc---cccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCcccc----ccccCcChHHHHHH
Q 011759 141 QGSDKDDSVK---NAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVA----EADEDESDLDLAWK 213 (478)
Q Consensus 141 ~~~~~de~~~---~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~----e~eEd~ddle~AwE 213 (478)
+.... ........ ..+ -..+ .+.....+++.|..
T Consensus 96 -----~~A~~~~~~a~~~~~~--------------~a~--------------------~~Lg~~y~~g~g~~~~~~~A~~ 136 (490)
T 2xm6_A 96 -----AQAVIWYKKAALKGLP--------------QAQ--------------------QNLGVMYHEGNGVKVDKAESVK 136 (490)
T ss_dssp -----HHHHHHHHHHHHTTCH--------------HHH--------------------HHHHHHHHHTSSSCCCHHHHHH
T ss_pred -----HHHHHHHHHHHHCCCH--------------HHH--------------------HHHHHHHHcCCCCCCCHHHHHH
Confidence 00000 00000000 000 0000 00011356777777
Q ss_pred HHHHHHHHHHHhcCCCchHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHc--
Q 011759 214 MLDVARAIAEKHWGDSMEKVDILSALAEVALE----REDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI-- 287 (478)
Q Consensus 214 ~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le----~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~-- 287 (478)
.|+.|... ....++.+||.+|.. .+++++|+..|+++++. .+ +.++++||.+|..
T Consensus 137 ~~~~a~~~---------~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~-------~~---~~a~~~Lg~~y~~g~ 197 (490)
T 2xm6_A 137 WFRLAAEQ---------GRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ-------GN---VWSCNQLGYMYSRGL 197 (490)
T ss_dssp HHHHHHHT---------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------TC---HHHHHHHHHHHHHTS
T ss_pred HHHHHHHC---------CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-------CC---HHHHHHHHHHHhcCC
Confidence 77776432 347899999999998 88999999999999874 12 5899999999998
Q ss_pred --CCCchHHHHHHHHHHHH
Q 011759 288 --GSKPQEAIPYCQKAISV 304 (478)
Q Consensus 288 --~~~~eeAl~~~ekAL~I 304 (478)
.+++++|+.+|++|++.
T Consensus 198 g~~~~~~~A~~~~~~a~~~ 216 (490)
T 2xm6_A 198 GVERNDAISAQWYRKSATS 216 (490)
T ss_dssp SSCCCHHHHHHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHHC
Confidence 89999999999999875
No 174
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.55 E-value=1e-06 Score=91.23 Aligned_cols=80 Identities=13% Similarity=0.005 Sum_probs=66.5
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 011759 207 DLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALE----REDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC 282 (478)
Q Consensus 207 dle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le----~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG 282 (478)
+++.|.++|+.|... ....++++||.+|.. .+++++|+..|++|++. .+ +.++++||
T Consensus 346 ~~~~A~~~~~~a~~~---------~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~-------~~---~~a~~~Lg 406 (490)
T 2xm6_A 346 EHKKAVEWFRKAAAK---------GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ-------GL---SAAQVQLG 406 (490)
T ss_dssp HHHHHHHHHHHHHHT---------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------TC---HHHHHHHH
T ss_pred cHHHHHHHHHHHHHC---------CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC-------CC---HHHHHHHH
Confidence 566666666655532 347899999999999 89999999999999873 12 68999999
Q ss_pred HHHHc----CCCchHHHHHHHHHHHHH
Q 011759 283 LCLEI----GSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 283 ~ay~~----~~~~eeAl~~~ekAL~I~ 305 (478)
.+|.. .+++++|+.+|++|++.-
T Consensus 407 ~~y~~g~g~~~d~~~A~~~~~~A~~~~ 433 (490)
T 2xm6_A 407 EIYYYGLGVERDYVQAWAWFDTASTND 433 (490)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 99998 899999999999999875
No 175
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.53 E-value=1.1e-06 Score=71.36 Aligned_cols=85 Identities=24% Similarity=0.246 Sum_probs=69.6
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|..+|+.++.+ .+....++..+|.++...++|++|+..|++++.+.. . ...+++++|.+|
T Consensus 15 ~~~~~A~~~~~~~~~~-------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-----~---~~~~~~~l~~~~ 79 (136)
T 2fo7_A 15 GDYDEAIEYYQKALEL-------DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP-----R---SAEAWYNLGNAY 79 (136)
T ss_dssp TCHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-----T---CHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHc-------CCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCC-----C---chHHHHHHHHHH
Confidence 4567777777777654 233467899999999999999999999999987632 2 257899999999
Q ss_pred HcCCCchHHHHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL~I~ 305 (478)
...+++++|+.+|++++.+.
T Consensus 80 ~~~~~~~~A~~~~~~~~~~~ 99 (136)
T 2fo7_A 80 YKQGDYDEAIEYYQKALELD 99 (136)
T ss_dssp HTTTCHHHHHHHHHHHHHHC
T ss_pred HHhcCHHHHHHHHHHHHHhC
Confidence 99999999999999998753
No 176
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.52 E-value=3.7e-07 Score=71.03 Aligned_cols=67 Identities=24% Similarity=0.294 Sum_probs=60.0
Q ss_pred chHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 230 MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 230 ~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
+..+.+|..||.++...++|++|+.+|++++.+.. ++ ..+|++||.+|...+++++|+.+|++++.+
T Consensus 6 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~-----~~---~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP-----NN---AEAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCC-----CC---HHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 35678999999999999999999999999998742 22 578999999999999999999999999976
No 177
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.50 E-value=3.1e-08 Score=79.98 Aligned_cols=101 Identities=13% Similarity=0.151 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCC
Q 011759 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (478)
Q Consensus 65 ~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~ 144 (478)
.+..++.+|..++..|+|++|+.+|.+|+++ .|....+|+++|.+|+.+
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~----------------------- 51 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITA--------QPQNPVGYSNKAMALIKL----------------------- 51 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT-----------------------
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHh-----------------------
Confidence 4678899999999999999999999999998 688899999999999875
Q ss_pred CccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011759 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (478)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek 224 (478)
++++.|++.|+.++.+.-.
T Consensus 52 -------------------------------------------------------------g~~~~A~~~~~~al~~~p~ 70 (111)
T 2l6j_A 52 -------------------------------------------------------------GEYTQAIQMCQQGLRYTST 70 (111)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHTSCSS
T ss_pred -------------------------------------------------------------cCHHHHHHHHHHHHHhCCC
Confidence 3466777777777654321
Q ss_pred hcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 011759 225 HWGDSMEKVDILSALAEVALEREDIETSLSDYQK 258 (478)
Q Consensus 225 ~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~k 258 (478)
.. .......+|..+|.++...|+++.|+..|++
T Consensus 71 ~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 71 AE-HVAIRSKLQYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp TT-SHHHHHHHHHHHHHHHHHHHCCCCCSSSSSS
T ss_pred cc-HHHHHHHHHHHHHHHHHHHHhHhhhHhHHHH
Confidence 10 1112488999999999999998888776653
No 178
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.41 E-value=5.7e-07 Score=94.63 Aligned_cols=86 Identities=15% Similarity=0.074 Sum_probs=76.5
Q ss_pred cChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 011759 205 ESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLC 284 (478)
Q Consensus 205 ~ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~a 284 (478)
.++++.|.+.|+.|+.+ .+..+.+|.+||.++..+|+|++|+.+|++||++. +..+.+|++||.+
T Consensus 19 ~g~~~~A~~~~~~Al~~-------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~--------p~~~~~~~~lg~~ 83 (477)
T 1wao_1 19 AKDYENAIKFYSQAIEL-------NPSNAIYYGNRSLAYLRTECYGYALGDATRAIELD--------KKYIKGYYRRAAS 83 (477)
T ss_dssp TTCHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSC--------TTCHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHh-------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHH
Confidence 47899999999988876 34568999999999999999999999999999883 3347899999999
Q ss_pred HHcCCCchHHHHHHHHHHHHH
Q 011759 285 LEIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 285 y~~~~~~eeAl~~~ekAL~I~ 305 (478)
|..+|++++|+.+|++|+++.
T Consensus 84 ~~~~g~~~eA~~~~~~al~~~ 104 (477)
T 1wao_1 84 NMALGKFRAALRDYETVVKVK 104 (477)
T ss_dssp HHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHcCCHHHHHHHHHHHHHhC
Confidence 999999999999999999874
No 179
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.35 E-value=2.1e-06 Score=79.72 Aligned_cols=91 Identities=10% Similarity=0.026 Sum_probs=72.9
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
++++.|...|+.++.++- ..+....++..||.++...|+|++|+..|++++++. |+++.+..++|.+|.+|
T Consensus 18 g~~~~A~~~~~~~~~~~p----~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~-----P~~~~~~~a~~~~g~~~ 88 (225)
T 2yhc_A 18 GNWRQAITQLEALDNRYP----FGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLN-----PTHPNIDYVMYMRGLTN 88 (225)
T ss_dssp TCHHHHHHHHHHHHHHCT----TSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTCTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCC----CChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHC-----cCCCcHHHHHHHHHHHH
Confidence 457777777777665432 234567899999999999999999999999999754 46677888999999999
Q ss_pred Hc------------------CCCchHHHHHHHHHHHHH
Q 011759 286 EI------------------GSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 286 ~~------------------~~~~eeAl~~~ekAL~I~ 305 (478)
.. .+++++|+.+|+++|...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~ 126 (225)
T 2yhc_A 89 MALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGY 126 (225)
T ss_dssp HHHHC--------------CCHHHHHHHHHHHHHHTTC
T ss_pred HhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHC
Confidence 75 578899999999888653
No 180
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.32 E-value=1.7e-06 Score=71.40 Aligned_cols=54 Identities=13% Similarity=0.062 Sum_probs=45.2
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERM 266 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~l 266 (478)
++++.|..+|+.++.+ .+....+|..||.++...|+|++|+..|++++.+....
T Consensus 33 g~~~~A~~~~~~al~~-------~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 86 (115)
T 2kat_A 33 EQFDAALPHLRAALDF-------DPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSR 86 (115)
T ss_dssp TCHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHH-------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcccc
Confidence 3567788888887765 23557899999999999999999999999999998764
No 181
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.28 E-value=3.6e-06 Score=73.38 Aligned_cols=75 Identities=13% Similarity=0.112 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 011759 211 AWKMLDVARAIAEKHWGDSMEKVDILSALAEVALE----REDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 286 (478)
Q Consensus 211 AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le----~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~ 286 (478)
|+++|++|... ..+.++++||.+|.. ..++++|+..|++|.+. . .+.++++||.+|.
T Consensus 44 A~~~~~~Aa~~---------g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~-------g---~~~a~~~Lg~~y~ 104 (138)
T 1klx_A 44 LFQYLSKACEL---------NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL-------N---DQDGCLILGYKQY 104 (138)
T ss_dssp HHHHHHHHHHT---------TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT-------T---CHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC---------CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC-------C---CHHHHHHHHHHHH
Confidence 77777766532 457899999999999 89999999999999864 1 2689999999999
Q ss_pred c----CCCchHHHHHHHHHHHH
Q 011759 287 I----GSKPQEAIPYCQKAISV 304 (478)
Q Consensus 287 ~----~~~~eeAl~~~ekAL~I 304 (478)
. .+++++|+.+|++|.+.
T Consensus 105 ~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 105 AGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp HTSSSCCCHHHHHHHHHHHHHT
T ss_pred CCCCCCcCHHHHHHHHHHHHHC
Confidence 9 89999999999999864
No 182
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.28 E-value=2.7e-06 Score=88.30 Aligned_cols=78 Identities=18% Similarity=0.203 Sum_probs=60.2
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcC-----CHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALERE-----DIETSLSDYQKALTILERMVEPDSRHIAELNFR 280 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g-----~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~ 280 (478)
.+++.|+++|+.|.. ...+.++++||.+|. .| ++++|+..|++|+ +.+ +.++|+
T Consensus 265 ~d~~~A~~~~~~Aa~---------~g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa--------~g~---~~A~~~ 323 (452)
T 3e4b_A 265 GDVEQMMKYLDNGRA---------ADQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV--------GRE---VAADYY 323 (452)
T ss_dssp CCHHHHHHHHHHHHH---------TTCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT--------TTC---HHHHHH
T ss_pred CCHHHHHHHHHHHHH---------CCCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh--------CCC---HHHHHH
Confidence 567777777666652 235788999999998 55 8999999998887 122 588999
Q ss_pred HHHHHHc----CCCchHHHHHHHHHHHH
Q 011759 281 ICLCLEI----GSKPQEAIPYCQKAISV 304 (478)
Q Consensus 281 LG~ay~~----~~~~eeAl~~~ekAL~I 304 (478)
||.+|.. ..++++|+.+|++|++.
T Consensus 324 Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 351 (452)
T 3e4b_A 324 LGQIYRRGYLGKVYPQKALDHLLTAARN 351 (452)
T ss_dssp HHHHHHTTTTSSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCCCCcCHHHHHHHHHHHHhh
Confidence 9999987 34899999999998863
No 183
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.25 E-value=1.5e-05 Score=83.40 Aligned_cols=82 Identities=11% Similarity=0.101 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 011759 208 LDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEV-ALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 286 (478)
Q Consensus 208 le~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev-~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~ 286 (478)
++.|..+|+.|+ ...+....+|...+.+ +...|++++|+..|+++|++.. ++ +.++.+++..+.
T Consensus 372 ~~~A~~~~~~Al-------~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p-----~~---~~~~~~~~~~~~ 436 (530)
T 2ooe_A 372 IKSGRMIFKKAR-------EDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYG-----DI---PEYVLAYIDYLS 436 (530)
T ss_dssp HHHHHHHHHHHH-------TCTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHT-----TC---HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH-------hccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCC-----CC---HHHHHHHHHHHH
Confidence 444555555544 3222334455555555 3358999999999999998763 33 477889999999
Q ss_pred cCCCchHHHHHHHHHHHH
Q 011759 287 IGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 287 ~~~~~eeAl~~~ekAL~I 304 (478)
..|++++|...|++|+..
T Consensus 437 ~~g~~~~Ar~~~~~al~~ 454 (530)
T 2ooe_A 437 HLNEDNNTRVLFERVLTS 454 (530)
T ss_dssp TTTCHHHHHHHHHHHHHS
T ss_pred hCCCHhhHHHHHHHHHhc
Confidence 999999999999998864
No 184
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.22 E-value=8.3e-06 Score=84.67 Aligned_cols=79 Identities=16% Similarity=0.098 Sum_probs=57.9
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALE----REDIETSLSDYQKALTILERMVEPDSRHIAELNFRI 281 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le----~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~L 281 (478)
.|+..|+.+|+.|. +..+.++++||.+|.. ..++++|+..|++|.+. .+ +.++|+|
T Consensus 301 ~d~~~A~~~~~~Aa----------~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~-------g~---~~A~~~L 360 (452)
T 3e4b_A 301 ADAKAAEAHFEKAV----------GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARN-------GQ---NSADFAI 360 (452)
T ss_dssp CCHHHHHHHHHTTT----------TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTT-------TC---TTHHHHH
T ss_pred CCHHHHHHHHHHHh----------CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhh-------Ch---HHHHHHH
Confidence 35555555554443 3457889999988887 34899999999988752 22 4788999
Q ss_pred HHHHHc----CCCchHHHHHHHHHHHH
Q 011759 282 CLCLEI----GSKPQEAIPYCQKAISV 304 (478)
Q Consensus 282 G~ay~~----~~~~eeAl~~~ekAL~I 304 (478)
|.+|.. ..++.+|+.+|++|.+.
T Consensus 361 g~~y~~G~g~~~d~~~A~~~~~~A~~~ 387 (452)
T 3e4b_A 361 AQLFSQGKGTKPDPLNAYVFSQLAKAQ 387 (452)
T ss_dssp HHHHHSCTTBCCCHHHHHHHHHHHHTT
T ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHC
Confidence 999985 45788999999888754
No 185
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.18 E-value=2.9e-06 Score=67.71 Aligned_cols=61 Identities=16% Similarity=0.113 Sum_probs=54.0
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHH-HHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 236 LSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAE-LNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 236 ~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAe-a~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
+..+|.+++..|+|++|+..|++++.+.. ++ +. +|++||.+|...+++++|+.+|++++.+
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p-----~~---~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEP-----VG---KDEAYYLMGNAYRKLGDWQKALNNYQSAIEL 64 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCS-----ST---HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCC-----Cc---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 35789999999999999999999998742 22 46 9999999999999999999999999976
No 186
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.18 E-value=3.7e-05 Score=79.27 Aligned_cols=141 Identities=12% Similarity=0.021 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCC
Q 011759 66 ADELMEKGTNALKES---DYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQG 142 (478)
Q Consensus 66 A~~L~~~G~~~~~~g---dy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~ 142 (478)
|-.|+-+|..++..+ ++.+|+.+|.+|+++ .|+.+.+|-.++.+++.+.... +
T Consensus 196 Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~l--------DP~~a~A~A~la~a~~~~~~~~-------~--------- 251 (372)
T 3ly7_A 196 LLTNFYQAHDYLLHGDDKSLNRASELLGEIVQS--------SPEFTYARAEKALVDIVRHSQH-------P--------- 251 (372)
T ss_dssp GHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHHS-------C---------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHhccC-------C---------
Confidence 567777887777764 458999999999999 8999999999888887431110 0
Q ss_pred CCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011759 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 222 (478)
Q Consensus 143 ~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ 222 (478)
... ..++.+..++...
T Consensus 252 --------------------------------------------------------------~~~--~~~~~l~~a~~a~ 267 (372)
T 3ly7_A 252 --------------------------------------------------------------LDE--KQLAALNTEIDNI 267 (372)
T ss_dssp --------------------------------------------------------------CCH--HHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------Cch--hhHHHHHHHHHHH
Confidence 000 0112233333321
Q ss_pred HHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHH
Q 011759 223 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (478)
Q Consensus 223 ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL 302 (478)
......+..+.+|..||.+++-.|++++|+..+++||.+. + + +..|..+|.+|.+.|++++|+++|++|+
T Consensus 268 -~a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln-----~-s---~~a~~llG~~~~~~G~~~eA~e~~~~Al 337 (372)
T 3ly7_A 268 -VTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLE-----M-S---WLNYVLLGKVYEMKGMNREAADAYLTAF 337 (372)
T ss_dssp -HTCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-----C-C---HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred -HhcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC-----C-C---HHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 1222235678899999999999999999999999999995 1 2 5788999999999999999999999999
Q ss_pred HH
Q 011759 303 SV 304 (478)
Q Consensus 303 ~I 304 (478)
.+
T Consensus 338 rL 339 (372)
T 3ly7_A 338 NL 339 (372)
T ss_dssp HH
T ss_pred hc
Confidence 87
No 187
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.17 E-value=8.6e-06 Score=79.06 Aligned_cols=91 Identities=20% Similarity=0.138 Sum_probs=64.5
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH-----------------------
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTI----------------------- 262 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I----------------------- 262 (478)
++++.|...|+.++.+ .+..+.++..||.+++..|+|++|+..|++++.+
T Consensus 131 g~~~~A~~~~~~al~~-------~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~ 203 (287)
T 3qou_A 131 SNYTDALPLLXDAWQL-------SNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTP 203 (287)
T ss_dssp TCHHHHHHHHHHHHHH-------TTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCH
T ss_pred CCHHHHHHHHHHHHHh-------CCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCc
Confidence 3455566655555543 3455678888888888888888888888776431
Q ss_pred ----HHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 263 ----LERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 263 ----~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
.++.+. .+|.-..++++||.+|...|++++|+.+|+++|.+
T Consensus 204 a~~~l~~al~-~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~ 248 (287)
T 3qou_A 204 EIQQLQQQVA-ENPEDAALATQLALQLHQVGRNEEALELLFGHLRX 248 (287)
T ss_dssp HHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHh-cCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhc
Confidence 111110 13334689999999999999999999999999976
No 188
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.17 E-value=8.1e-06 Score=85.36 Aligned_cols=30 Identities=10% Similarity=0.121 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHh
Q 011759 83 GEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLY 120 (478)
Q Consensus 83 ~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~ 120 (478)
..|+.+|.+|+.+ .|....+|+.||..+..
T Consensus 255 ~~a~~~y~~al~~--------~p~~~~~w~~~~~~~~~ 284 (530)
T 2ooe_A 255 KRVMFAYEQCLLV--------LGHHPDIWYEAAQYLEQ 284 (530)
T ss_dssp HHHHHHHHHHHHH--------HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHH
Confidence 4788999999998 47788999999999886
No 189
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.16 E-value=2.6e-05 Score=60.26 Aligned_cols=49 Identities=31% Similarity=0.497 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhh
Q 011759 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYK 121 (478)
Q Consensus 65 ~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ 121 (478)
.+..++.+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+++..
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~ 56 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPNNAEAWYNLGNAYYKQ 56 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHH
Confidence 4677889999999999999999999999997 677889999999999865
No 190
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.15 E-value=9.9e-06 Score=67.34 Aligned_cols=72 Identities=13% Similarity=0.020 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Q 011759 233 VDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 233 Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~ 305 (478)
+.-++.||.+++..++|..|+.-|++||.....-.. .....+.+|++||.||..+|++++|+.+|++|+.+.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~ 76 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELD 76 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC
Confidence 445679999999999999999999999988754321 123467999999999999999999999999999763
No 191
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.09 E-value=3.1e-05 Score=91.23 Aligned_cols=83 Identities=17% Similarity=0.099 Sum_probs=63.6
Q ss_pred cChHHHHHHHHHHHHHHH-------------HHhcC--------CCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 011759 205 ESDLDLAWKMLDVARAIA-------------EKHWG--------DSMEKVDILSALAEVALEREDIETSLSDYQKALTIL 263 (478)
Q Consensus 205 ~ddle~AwE~Le~Ar~I~-------------ek~l~--------~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~ 263 (478)
.++|+.|.++|.+||.+- .|... ..+..+ .|..+|+.+...|+|++|+.+|.+|
T Consensus 1147 lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~n~a-d~~~iGd~le~eg~YeeA~~~Y~kA---- 1221 (1630)
T 1xi4_A 1147 SGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNA-HIQQVGDRCYDEKMYDAAKLLYNNV---- 1221 (1630)
T ss_pred cCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCCCHH-HHHHHHHHHHhcCCHHHHHHHHHhh----
Confidence 467888888888877332 22100 112333 4557999999999999999999985
Q ss_pred HHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 264 ERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 264 ~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
..|.+|+.+|.++|+|++|+++|++|...
T Consensus 1222 ------------~ny~rLA~tLvkLge~q~AIEaarKA~n~ 1250 (1630)
T 1xi4_A 1222 ------------SNFGRLASTLVHLGEYQAAVDGARKANST 1250 (1630)
T ss_pred ------------hHHHHHHHHHHHhCCHHHHHHHHHHhCCH
Confidence 57899999999999999999999998665
No 192
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.05 E-value=2.9e-06 Score=75.57 Aligned_cols=89 Identities=13% Similarity=0.085 Sum_probs=66.5
Q ss_pred HHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH--------------HhcCC------------
Q 011759 216 DVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILE--------------RMVEP------------ 269 (478)
Q Consensus 216 e~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~--------------~llg~------------ 269 (478)
+.|+.+|++.+...+....+|..||.+++..|+|++|+..|++++.+.. .....
T Consensus 23 ~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~ 102 (176)
T 2r5s_A 23 AQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQAAESPELKRLEQELA 102 (176)
T ss_dssp HHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhhcccchHHHHHHHHHH
Confidence 4455555554444466789999999999999999999999988754310 00111
Q ss_pred CChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 270 DSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 270 d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
-+|.-..+|++||.+|...|++++|+.+|++++.+
T Consensus 103 ~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 137 (176)
T 2r5s_A 103 ANPDNFELACELAVQYNQVGRDEEALELLWNILKV 137 (176)
T ss_dssp HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred hCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHh
Confidence 13344689999999999999999999999999865
No 193
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.97 E-value=4.2e-05 Score=62.24 Aligned_cols=54 Identities=7% Similarity=0.153 Sum_probs=45.1
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERM 266 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~l 266 (478)
++++.|...|+.++.+ .+....+|..||.++...|+|++|+..|+++|.+.+..
T Consensus 21 g~~~~A~~~~~~al~~-------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 21 DNASRALALFEELVET-------DPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp TCHHHHHHHHHHHHHH-------STTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh-------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 4577788888877765 24456799999999999999999999999999998765
No 194
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.97 E-value=4.3e-05 Score=69.50 Aligned_cols=87 Identities=10% Similarity=-0.006 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHhcCCCCh-HHHHHHHHHHHHHHcC
Q 011759 213 KMLDVARAIAEKHWGDSMEKVDILSALAEVALERE---DIETSLSDYQKALTILERMVEPDSR-HIAELNFRICLCLEIG 288 (478)
Q Consensus 213 E~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g---~feeAl~dy~kAL~I~~~llg~d~r-~iAea~~~LG~ay~~~ 288 (478)
+.+..++.-|.+.........++.+++|..+...+ ++.++|..|+..++.- +| .-.+++|+||++|.+.
T Consensus 12 ~~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~-------~p~~~rd~lY~LAv~~~kl 84 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG-------SKEEQRDYVFYLAVGNYRL 84 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS-------CHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-------CccchHHHHHHHHHHHHHc
Confidence 34566666666654433356899999999999988 6778888888777643 23 3469999999999999
Q ss_pred CCchHHHHHHHHHHHHHH
Q 011759 289 SKPQEAIPYCQKAISVCK 306 (478)
Q Consensus 289 ~~~eeAl~~~ekAL~I~k 306 (478)
++|++|+.||+++|++-.
T Consensus 85 ~~Y~~A~~y~~~lL~ieP 102 (152)
T 1pc2_A 85 KEYEKALKYVRGLLQTEP 102 (152)
T ss_dssp SCHHHHHHHHHHHHHHCT
T ss_pred cCHHHHHHHHHHHHhcCC
Confidence 999999999999998854
No 195
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.97 E-value=1.9e-05 Score=62.79 Aligned_cols=45 Identities=18% Similarity=0.223 Sum_probs=40.3
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHH-HHHHHHHHHHhh
Q 011759 69 LMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVN-AYYQYGRALLYK 121 (478)
Q Consensus 69 L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~-~y~~YG~ALl~~ 121 (478)
++.+|..++..|+|++|+.+|.+++++ +|.... +|+++|.+++..
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~lg~~~~~~ 48 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQT--------EPVGKDEAYYLMGNAYRKL 48 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHH--------CSSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCcHHHHHHHHHHHHHHc
Confidence 467899999999999999999999997 688888 999999999875
No 196
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.95 E-value=0.00017 Score=72.22 Aligned_cols=88 Identities=11% Similarity=0.088 Sum_probs=71.9
Q ss_pred cChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhc-----CCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011759 205 ESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALER-----EDIETSLSDYQKALTILERMVEPDSRHIAELNF 279 (478)
Q Consensus 205 ~ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~-----g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~ 279 (478)
...+..|..++++|+.|-. ...-..+|..||.+|... |+.++|..+|++||+|-.... ..++|
T Consensus 176 l~~l~~A~a~lerAleLDP-----~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~-------id~~v 243 (301)
T 3u64_A 176 PDTVHAAVMMLERACDLWP-----SYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHD-------PDHHI 243 (301)
T ss_dssp HHHHHHHHHHHHHHHHHCT-----THHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTC-------SHHHH
T ss_pred HHhHHHHHHHHHHHHHhCC-----CcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCC-------chHHH
Confidence 3567777778888876622 223577999999999995 999999999999999987431 38899
Q ss_pred HHHHHHHcC-CCchHHHHHHHHHHHH
Q 011759 280 RICLCLEIG-SKPQEAIPYCQKAISV 304 (478)
Q Consensus 280 ~LG~ay~~~-~~~eeAl~~~ekAL~I 304 (478)
..|..|... +++++|..++++||.+
T Consensus 244 ~YA~~l~~~~gd~~~a~~~L~kAL~a 269 (301)
T 3u64_A 244 TYADALCIPLNNRAGFDEALDRALAI 269 (301)
T ss_dssp HHHHHTTTTTTCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHcC
Confidence 999999884 9999999999999864
No 197
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=97.85 E-value=0.00011 Score=79.41 Aligned_cols=149 Identities=11% Similarity=0.047 Sum_probs=114.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcC
Q 011759 59 REKTVEFADELMEKGTNALKESDYG-EAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEG 137 (478)
Q Consensus 59 ~~~~l~~A~~L~~~G~~~~~~gdy~-eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~ 137 (478)
+.+.+..-..++..-......++|+ +|+++|.+++++ +|+...+|+.-|.+|..+++...
T Consensus 21 ~~~k~~~y~~~~~~~~~~~~~~~~~eeal~~~~~~l~~--------nP~~~taW~~R~~~l~~l~~~~~----------- 81 (567)
T 1dce_A 21 REQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGA--------NPDFATLWNCRREVLQHLETEKS----------- 81 (567)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHTTSC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH--------CchhHHHHHHHHHHHHhcccccc-----------
Confidence 3444555566677777777888775 669999999999 89999999999999998732100
Q ss_pred CCCCCCCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHH
Q 011759 138 DSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDV 217 (478)
Q Consensus 138 e~~~~~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~ 217 (478)
.+.....++.|++.++.
T Consensus 82 ---------------------------------------------------------------~~~~~~~~~~eL~~~~~ 98 (567)
T 1dce_A 82 ---------------------------------------------------------------PEESAALVKAELGFLES 98 (567)
T ss_dssp ---------------------------------------------------------------HHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------hhhhhhhHHHHHHHHHH
Confidence 00011345566666655
Q ss_pred HHHHHHHhcCCCchHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCC-CchHH
Q 011759 218 ARAIAEKHWGDSMEKVDILSALAEVALERE--DIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGS-KPQEA 294 (478)
Q Consensus 218 Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g--~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~-~~eeA 294 (478)
++. ..++-..+|..-+.+....+ +|++|+.+|.++|++..+.+ .+|++.+.++...+ .++++
T Consensus 99 ~l~-------~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~--------~aW~~R~~~l~~l~~~~~~e 163 (567)
T 1dce_A 99 CLR-------VNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNF--------HCWDYRRFVAAQAAVAPAEE 163 (567)
T ss_dssp HHH-------HCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCH--------HHHHHHHHHHHHTCCCHHHH
T ss_pred HHH-------hCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccc--------cHHHHHHHHHHHcCCChHHH
Confidence 553 34567889999999999999 77999999999999876664 89999999999999 89999
Q ss_pred HHHHHHHHHH
Q 011759 295 IPYCQKAISV 304 (478)
Q Consensus 295 l~~~ekAL~I 304 (478)
+++|.++|++
T Consensus 164 l~~~~~~I~~ 173 (567)
T 1dce_A 164 LAFTDSLITR 173 (567)
T ss_dssp HHHHHTTTTT
T ss_pred HHHHHHHHHH
Confidence 9998888764
No 198
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.82 E-value=0.00026 Score=83.55 Aligned_cols=87 Identities=7% Similarity=-0.095 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh------------cCC--------CChHHHHHHHHHHHHHHcCCCc
Q 011759 232 KVDILSALAEVALEREDIETSLSDYQKALTILERM------------VEP--------DSRHIAELNFRICLCLEIGSKP 291 (478)
Q Consensus 232 ~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~l------------lg~--------d~r~iAea~~~LG~ay~~~~~~ 291 (478)
-.+.|..+|.++...|+|++|+.+|..|+++.+.. ++. ..+.. ..++++|.+|...|+|
T Consensus 1133 D~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~n~-ad~~~iGd~le~eg~Y 1211 (1630)
T 1xi4_A 1133 DPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNN-AHIQQVGDRCYDEKMY 1211 (1630)
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCCCH-HHHHHHHHHHHhcCCH
Confidence 35688889999999999999999998877554210 000 12222 3567899999999999
Q ss_pred hHHHHHHHHHHHHHH-----HHHHHHHHHHHhh
Q 011759 292 QEAIPYCQKAISVCK-----SRVQRLLNEVKSL 319 (478)
Q Consensus 292 eeAl~~~ekAL~I~k-----~rl~~l~~~l~~~ 319 (478)
++|+.+|++|-.-.+ -+++..+..++..
T Consensus 1212 eeA~~~Y~kA~ny~rLA~tLvkLge~q~AIEaa 1244 (1630)
T 1xi4_A 1212 DAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGA 1244 (1630)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHhCCHHHHHHHH
Confidence 999999999843322 2334444555544
No 199
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=97.76 E-value=0.00034 Score=70.01 Aligned_cols=135 Identities=8% Similarity=-0.056 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDY-GEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy-~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~ 144 (478)
-..+++.-...+..+.| ++|+.++.++|.+ +|+...+++.-|.+|..++.
T Consensus 32 y~~~~~~~~a~~~~~e~s~~aL~~t~~~L~~--------nP~~~taWn~R~~~L~~l~~--------------------- 82 (306)
T 3dra_A 32 YKQIMGLLLALMKAEEYSERALHITELGINE--------LASHYTIWIYRFNILKNLPN--------------------- 82 (306)
T ss_dssp HHHHHHHHHHHHHTTCCSHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHTCTT---------------------
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH--------CcHHHHHHHHHHHHHHHccc---------------------
Confidence 45666677777888888 5899999999999 89999999999999986510
Q ss_pred CccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011759 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (478)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek 224 (478)
.+++.+++.++.++.+
T Consensus 83 -------------------------------------------------------------~~~~eeL~~~~~~L~~--- 98 (306)
T 3dra_A 83 -------------------------------------------------------------RNLYDELDWCEEIALD--- 98 (306)
T ss_dssp -------------------------------------------------------------SCHHHHHHHHHHHHHH---
T ss_pred -------------------------------------------------------------ccHHHHHHHHHHHHHH---
Confidence 1466667667666544
Q ss_pred hcCCCchHHHHHHHHHHHH----Hhc---CCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCch--HHH
Q 011759 225 HWGDSMEKVDILSALAEVA----LER---EDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQ--EAI 295 (478)
Q Consensus 225 ~l~~~~~~Ad~~~~LGev~----le~---g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~e--eAl 295 (478)
.++...+++..+.+. ... +++++++..+.++|.+..+.+ .+++..+.++...++++ +++
T Consensus 99 ----nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny--------~aW~~R~~vl~~l~~~~~~~EL 166 (306)
T 3dra_A 99 ----NEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNH--------HVWSYRKWLVDTFDLHNDAKEL 166 (306)
T ss_dssp ----CTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCH--------HHHHHHHHHHHHTTCTTCHHHH
T ss_pred ----CcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCH--------HHHHHHHHHHHHhcccChHHHH
Confidence 334456777777777 555 799999999999999877765 89999999999999999 999
Q ss_pred HHHHHHHHHH
Q 011759 296 PYCQKAISVC 305 (478)
Q Consensus 296 ~~~ekAL~I~ 305 (478)
.++.++|++-
T Consensus 167 ~~~~~~i~~d 176 (306)
T 3dra_A 167 SFVDKVIDTD 176 (306)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhC
Confidence 9999998753
No 200
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=97.61 E-value=0.00019 Score=77.50 Aligned_cols=135 Identities=7% Similarity=-0.123 Sum_probs=108.2
Q ss_pred HHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCC
Q 011759 66 ADELMEKGTNALKESD----------YGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKK 135 (478)
Q Consensus 66 A~~L~~~G~~~~~~gd----------y~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~ 135 (478)
...+..+|..+...++ |++|+++|.+++++ +|.+..+|++-|.+|..+++
T Consensus 63 ~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~--------~pK~y~aW~hR~w~l~~l~~------------ 122 (567)
T 1dce_A 63 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV--------NPKSYGTWHHRCWLLSRLPE------------ 122 (567)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHTCSS------------
T ss_pred HHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHccc------------
Confidence 4567788888888888 99999999999998 89999999999999976410
Q ss_pred cCCCCCCCCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHH
Q 011759 136 EGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKML 215 (478)
Q Consensus 136 ~~e~~~~~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~L 215 (478)
.+++.|++.+
T Consensus 123 ----------------------------------------------------------------------~~~~~el~~~ 132 (567)
T 1dce_A 123 ----------------------------------------------------------------------PNWARELELC 132 (567)
T ss_dssp ----------------------------------------------------------------------CCHHHHHHHH
T ss_pred ----------------------------------------------------------------------ccHHHHHHHH
Confidence 2355666666
Q ss_pred HHHHHHHHHhcCCCchHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcC------
Q 011759 216 DVARAIAEKHWGDSMEKVDILSALAEVALERE-DIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIG------ 288 (478)
Q Consensus 216 e~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g-~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~------ 288 (478)
+.++.+ .++-..+|+..|.+....+ .|++++.++.+++++.... ..+|+++|.++...
T Consensus 133 ~k~l~~-------d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n--------~saW~~r~~ll~~l~~~~~~ 197 (567)
T 1dce_A 133 ARFLEA-------DERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSN--------YSSWHYRSCLLPQLHPQPDS 197 (567)
T ss_dssp HHHHHH-------CTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCC--------HHHHHHHHHHHHHHSCCCCS
T ss_pred HHHHhh-------ccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCC--------ccHHHHHHHHHHhhcccccc
Confidence 666654 3455779999999999999 9999999999998754333 48899999998874
Q ss_pred --------CCchHHHHHHHHHHHHH
Q 011759 289 --------SKPQEAIPYCQKAISVC 305 (478)
Q Consensus 289 --------~~~eeAl~~~ekAL~I~ 305 (478)
+++++|+++|.+||.+.
T Consensus 198 ~~~~~~~~~~~~eel~~~~~ai~~~ 222 (567)
T 1dce_A 198 GPQGRLPENVLLKELELVQNAFFTD 222 (567)
T ss_dssp SSCCSSCHHHHHHHHHHHHHHHHHC
T ss_pred cccccccHHHHHHHHHHHHHHHhhC
Confidence 45789999999999865
No 201
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=97.61 E-value=0.00043 Score=57.22 Aligned_cols=69 Identities=17% Similarity=0.178 Sum_probs=55.2
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC 282 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG 282 (478)
++|..|...|+.|+..+..........+++|..||.++..+|+|+.|+.+|+++|.+. |+|+ .+++|++
T Consensus 19 ~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~-----P~~~---~~~~n~~ 87 (104)
T 2v5f_A 19 ADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELD-----PEHQ---RANGNLK 87 (104)
T ss_dssp TCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTCH---HHHHHHH
T ss_pred cchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC-----CCCH---HHHhhHH
Confidence 5788999999999988865433345688999999999999999999999999999874 3443 3456664
No 202
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.53 E-value=3e-05 Score=81.81 Aligned_cols=55 Identities=15% Similarity=0.056 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 234 DILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 234 d~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
.+|..+|+.+.+.|+|++|+.+|.++ ..|.+|+.||.++|+|++|++.|++|..+
T Consensus 123 ~a~~~IGd~~~~~g~yeeA~~~Y~~a----------------~n~~~LA~~L~~Lg~yq~AVea~~KA~~~ 177 (449)
T 1b89_A 123 AHIQQVGDRCYDEKMYDAAKLLYNNV----------------SNFGRLASTLVHLGEYQAAVDGARKANST 177 (449)
T ss_dssp --------------CTTTHHHHHHHT----------------TCHHHHHHHHHTTTCHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh----------------hhHHHHHHHHHHhccHHHHHHHHHHcCCc
Confidence 49999999999999999999999976 46889999999999999999999999654
No 203
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.42 E-value=0.00091 Score=61.57 Aligned_cols=95 Identities=12% Similarity=0.183 Sum_probs=70.5
Q ss_pred ChHHHHHHHHHHHHHHHHHhcC--CCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCC------------
Q 011759 206 SDLDLAWKMLDVARAIAEKHWG--DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDS------------ 271 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~--~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~------------ 271 (478)
.-|+.|.-...+++.+.....+ .....++++..+|+.++..++|.+|+..|++||.+++.+.-..+
T Consensus 34 ~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p 113 (167)
T 3ffl_A 34 GLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTP 113 (167)
T ss_dssp TCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-----------------
T ss_pred hhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCc
Confidence 4566666666666666544333 23457899999999999999999999999999999996542211
Q ss_pred -----hHHHHHHHHHHHHHHcCCCchHHHHHHHH
Q 011759 272 -----RHIAELNFRICLCLEIGSKPQEAIPYCQK 300 (478)
Q Consensus 272 -----r~iAea~~~LG~ay~~~~~~eeAl~~~ek 300 (478)
+.-+++-|+|+.||...+++++||..++.
T Consensus 114 ~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 114 QSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp ---CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred ccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 11247889999999999999999887643
No 204
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=97.41 E-value=0.0018 Score=64.63 Aligned_cols=140 Identities=8% Similarity=-0.087 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCC
Q 011759 66 ADELMEKGTNALKES--DYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (478)
Q Consensus 66 A~~L~~~G~~~~~~g--dy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~ 143 (478)
......+|..+...+ +|++|+.++.+++.+ +|++..+++.-|.+|.++... ++.
T Consensus 67 ~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~--------nPk~y~aW~~R~~iL~~~~~~----l~~------------ 122 (306)
T 3dra_A 67 YTIWIYRFNILKNLPNRNLYDELDWCEEIALD--------NEKNYQIWNYRQLIIGQIMEL----NNN------------ 122 (306)
T ss_dssp HHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHH--------CTTCCHHHHHHHHHHHHHHHH----TTT------------
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHHH--------CcccHHHHHHHHHHHHHHHHh----ccc------------
Confidence 445678899999999 999999999999998 899999999999999554111 000
Q ss_pred CCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011759 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 223 (478)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~e 223 (478)
..+++.++++++.++.+
T Consensus 123 -------------------------------------------------------------~~~~~~EL~~~~~~l~~-- 139 (306)
T 3dra_A 123 -------------------------------------------------------------DFDPYREFDILEAMLSS-- 139 (306)
T ss_dssp -------------------------------------------------------------CCCTHHHHHHHHHHHHH--
T ss_pred -------------------------------------------------------------cCCHHHHHHHHHHHHHh--
Confidence 02344556666666543
Q ss_pred HhcCCCchHHHHHHHHHHHHHhcCCHH--HHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCC------chHHH
Q 011759 224 KHWGDSMEKVDILSALAEVALEREDIE--TSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSK------PQEAI 295 (478)
Q Consensus 224 k~l~~~~~~Ad~~~~LGev~le~g~fe--eAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~------~eeAl 295 (478)
.++-..+++..+-+....++|+ +++.++.++|++....+ .++++.+.++...++ +++++
T Consensus 140 -----~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~--------sAW~~R~~ll~~l~~~~~~~~~~eEl 206 (306)
T 3dra_A 140 -----DPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNN--------SAWSHRFFLLFSKKHLATDNTIDEEL 206 (306)
T ss_dssp -----CTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCH--------HHHHHHHHHHHSSGGGCCHHHHHHHH
T ss_pred -----CCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCH--------HHHHHHHHHHHhccccchhhhHHHHH
Confidence 3455778999999999999999 99999999998766554 789999999999887 89999
Q ss_pred HHHHHHHHHH
Q 011759 296 PYCQKAISVC 305 (478)
Q Consensus 296 ~~~ekAL~I~ 305 (478)
+++.++|.+-
T Consensus 207 ~~~~~aI~~~ 216 (306)
T 3dra_A 207 NYVKDKIVKC 216 (306)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhC
Confidence 9999999764
No 205
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=97.41 E-value=0.002 Score=65.23 Aligned_cols=142 Identities=10% Similarity=0.021 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCC
Q 011759 66 ADELMEKGTNALKESDYG-EAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~-eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~ 144 (478)
-..++..-......|+|+ +|++++.+++.+ +|++..+++.-|.+|..+++.. +
T Consensus 29 y~~~~~~~~~~~~~~e~s~eaL~~t~~~L~~--------nP~~ytaWn~Rr~iL~~l~~~~----~-------------- 82 (331)
T 3dss_A 29 YQSATQAVFQKRQAGELDESVLELTSQILGA--------NPDFATLWNCRREVLQHLETEK----S-------------- 82 (331)
T ss_dssp HHHHHHHHHHHHHTTCCSHHHHHHHHHHHTT--------CTTCHHHHHHHHHHHHHHHHHS----C--------------
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH--------CchhHHHHHHHHHHHHHhcccc----c--------------
Confidence 334455555566788888 799999999998 8999999999999998874320 0
Q ss_pred CccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011759 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (478)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek 224 (478)
+ ++....|+.++.+++.++.+
T Consensus 83 -------------------~-------------------------------------~~~~~~l~~EL~~~~~~L~~--- 103 (331)
T 3dss_A 83 -------------------P-------------------------------------EESAALVKAELGFLESCLRV--- 103 (331)
T ss_dssp -------------------H-------------------------------------HHHHHHHHHHHHHHHHHHHH---
T ss_pred -------------------c-------------------------------------hhhhHHHHHHHHHHHHHHHh---
Confidence 0 00012355555555555433
Q ss_pred hcCCCchHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCC-chHHHHHHHHH
Q 011759 225 HWGDSMEKVDILSALAEVALERE--DIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSK-PQEAIPYCQKA 301 (478)
Q Consensus 225 ~l~~~~~~Ad~~~~LGev~le~g--~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~-~eeAl~~~ekA 301 (478)
.++-..+++.-+.+....+ .|++++.+|.++|.+..+.+ .+++..+.++...++ +++++.++.++
T Consensus 104 ----~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy--------~AW~~R~~vl~~l~~~~~eel~~~~~~ 171 (331)
T 3dss_A 104 ----NPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNF--------HCWDYRRFVAAQAAVAPAEELAFTDSL 171 (331)
T ss_dssp ----CTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCH--------HHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred ----CCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCH--------HHHHHHHHHHHHhCcCHHHHHHHHHHH
Confidence 4566788999999999988 49999999999999877665 889999999999998 59999999999
Q ss_pred HHH
Q 011759 302 ISV 304 (478)
Q Consensus 302 L~I 304 (478)
|.+
T Consensus 172 I~~ 174 (331)
T 3dss_A 172 ITR 174 (331)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 206
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.35 E-value=0.00028 Score=58.14 Aligned_cols=66 Identities=17% Similarity=-0.060 Sum_probs=57.2
Q ss_pred chHHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Q 011759 230 MEKVDILSALAEVALERED---IETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (478)
Q Consensus 230 ~~~Ad~~~~LGev~le~g~---feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~ 303 (478)
+.-++++..+|.+++..++ .++|...|+++|++-... ..+++.||..+...|+|++|+.+|++.+.
T Consensus 3 p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~--------~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~ 71 (93)
T 3bee_A 3 AVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYN--------EAALSLIANDHFISFRFQEAIDTWVLLLD 71 (93)
T ss_dssp CCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTC--------HHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCC--------HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 3457889999999976666 799999999999977655 48999999999999999999999999774
No 207
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.18 E-value=0.00076 Score=58.43 Aligned_cols=78 Identities=17% Similarity=0.054 Sum_probs=63.7
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
.|++.|+++|+.|... ++ ..++ ||.+|.....+++|+..|++|.+. . .+.++++||.+|
T Consensus 9 ~d~~~A~~~~~~aa~~-----g~----~~a~--lg~~y~~g~~~~~A~~~~~~Aa~~-------g---~~~a~~~Lg~~y 67 (138)
T 1klx_A 9 KDLKKAIQYYVKACEL-----NE----MFGC--LSLVSNSQINKQKLFQYLSKACEL-------N---SGNGCRFLGDFY 67 (138)
T ss_dssp HHHHHHHHHHHHHHHT-----TC----TTHH--HHHHTCTTSCHHHHHHHHHHHHHT-------T---CHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHcC-----CC----Hhhh--HHHHHHcCCCHHHHHHHHHHHHcC-------C---CHHHHHHHHHHH
Confidence 5788888888777532 11 1233 999999999999999999999875 1 268999999999
Q ss_pred Hc----CCCchHHHHHHHHHHHH
Q 011759 286 EI----GSKPQEAIPYCQKAISV 304 (478)
Q Consensus 286 ~~----~~~~eeAl~~~ekAL~I 304 (478)
.. .+++++|+.+|++|.+.
T Consensus 68 ~~G~g~~~d~~~A~~~~~~Aa~~ 90 (138)
T 1klx_A 68 ENGKYVKKDLRKAAQYYSKACGL 90 (138)
T ss_dssp HHCSSSCCCHHHHHHHHHHHHHT
T ss_pred HcCCCCCccHHHHHHHHHHHHcC
Confidence 98 88999999999999864
No 208
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.13 E-value=0.0027 Score=52.07 Aligned_cols=48 Identities=15% Similarity=0.059 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 011759 209 DLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTIL 263 (478)
Q Consensus 209 e~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~ 263 (478)
..|..+|+.|+.+ .+....+++.||.+++..|+|++|+.+|++.|...
T Consensus 26 ~~A~~~l~~AL~~-------dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~ 73 (93)
T 3bee_A 26 DEVSLLLEQALQL-------EPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSN 73 (93)
T ss_dssp HHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHH-------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 3456666666654 46778999999999999999999999999988753
No 209
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.04 E-value=0.00087 Score=70.72 Aligned_cols=64 Identities=14% Similarity=0.095 Sum_probs=42.0
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCC--CchHHHHHHHHHHHHHH
Q 011759 235 ILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGS--KPQEAIPYCQKAISVCK 306 (478)
Q Consensus 235 ~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~--~~eeAl~~~ekAL~I~k 306 (478)
-+..|...|...|+|++|+..|+++|.+-+.+ ...+..||.+|..-. ++.+.++.|...+.|-+
T Consensus 209 ~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah--------~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k 274 (449)
T 1b89_A 209 ELEELINYYQDRGYFEELITMLEAALGLERAH--------MGMFTELAILYSKFKPQKMREHLELFWSRVNIPK 274 (449)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCC--------HHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHH
T ss_pred hHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHH--------HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcH
Confidence 34456677777777777777777777655443 356666777766433 56677777777766654
No 210
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.92 E-value=0.011 Score=52.09 Aligned_cols=104 Identities=11% Similarity=0.069 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCCh-HHHHHHHHHHHHHHcC
Q 011759 210 LAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSR-HIAELNFRICLCLEIG 288 (478)
Q Consensus 210 ~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r-~iAea~~~LG~ay~~~ 288 (478)
+.-+.|..++.-|.+.........++-+++|..+....+-. +-++.+.|++.++..++| .-=+++|.||+.|.+.
T Consensus 12 ~~~~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~----d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~ykl 87 (126)
T 1nzn_A 12 VSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYND----DIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRL 87 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHH----HHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHH----HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHh
Confidence 44566777888887764422345789999999999987654 456777888888776644 5669999999999999
Q ss_pred CCchHHHHHHHHHHHHHH--HHHHHHHHHHH
Q 011759 289 SKPQEAIPYCQKAISVCK--SRVQRLLNEVK 317 (478)
Q Consensus 289 ~~~eeAl~~~ekAL~I~k--~rl~~l~~~l~ 317 (478)
|+|.+|+.+++..|++-. .....|+..++
T Consensus 88 g~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~ 118 (126)
T 1nzn_A 88 KEYEKALKYVRGLLQTEPQNNQAKELERLID 118 (126)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 999999999999998855 34444444443
No 211
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=96.82 E-value=0.0092 Score=59.96 Aligned_cols=139 Identities=12% Similarity=-0.005 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCCc
Q 011759 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKD 146 (478)
Q Consensus 67 ~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~d 146 (478)
..++-+|.++...|+|++|+.+|.+.+.. |+ .+...+++.....+|+..
T Consensus 101 ~~~~~la~i~~~~g~~eeAL~~l~~~i~~-----~~-~~~~lea~~l~vqi~L~~------------------------- 149 (310)
T 3mv2_B 101 YELYLLATAQAILGDLDKSLETCVEGIDN-----DE-AEGTTELLLLAIEVALLN------------------------- 149 (310)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTS-----SC-STTHHHHHHHHHHHHHHT-------------------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhcc-----CC-CcCcHHHHHHHHHHHHHC-------------------------
Confidence 34568899999999999999999988553 22 247778999999999875
Q ss_pred cccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHhc
Q 011759 147 DSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHW 226 (478)
Q Consensus 147 e~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~l 226 (478)
+.+++|.++|+..+.+.....
T Consensus 150 -----------------------------------------------------------~r~d~A~k~l~~~~~~~~d~~ 170 (310)
T 3mv2_B 150 -----------------------------------------------------------NNVSTASTIFDNYTNAIEDTV 170 (310)
T ss_dssp -----------------------------------------------------------TCHHHHHHHHHHHHHHSCHHH
T ss_pred -----------------------------------------------------------CCHHHHHHHHHHHHhcCcccc
Confidence 345566666665554421000
Q ss_pred CCCchHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 227 GDSMEKVDILSALAEVALERE--DIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 227 ~~~~~~Ad~~~~LGev~le~g--~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
. .-+-.-++..-|.|.+..| +|.+|...|++.+. .+| + ......+++ |+..+|+|++|...+++.++.
T Consensus 171 ~-~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~----~~p-~-~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~ 240 (310)
T 3mv2_B 171 S-GDNEMILNLAESYIKFATNKETATSNFYYYEELSQ----TFP-T-WKTQLGLLN---LHLQQRNIAEAQGIVELLLSD 240 (310)
T ss_dssp H-HHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHT----TSC-S-HHHHHHHHH---HHHHHTCHHHHHHHHHHHHSH
T ss_pred c-cchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH----hCC-C-cccHHHHHH---HHHHcCCHHHHHHHHHHHHHh
Confidence 0 0012223333444455555 99999999988543 222 1 123345555 899999999999999876665
Q ss_pred H
Q 011759 305 C 305 (478)
Q Consensus 305 ~ 305 (478)
.
T Consensus 241 ~ 241 (310)
T 3mv2_B 241 Y 241 (310)
T ss_dssp H
T ss_pred c
Confidence 3
No 212
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=96.75 E-value=0.0064 Score=62.04 Aligned_cols=126 Identities=7% Similarity=-0.021 Sum_probs=97.5
Q ss_pred HHHHHc-CCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCCccccccc
Q 011759 74 TNALKE-SDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNA 152 (478)
Q Consensus 74 ~~~~~~-gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~de~~~~~ 152 (478)
+..+.. ...++|++++.+++.+ +|++..+++.-|.+|..++
T Consensus 61 r~~~~~~e~se~AL~lt~~~L~~--------nP~~ytaWn~R~~iL~~l~------------------------------ 102 (349)
T 3q7a_A 61 RAIAAKEEKSERALELTEIIVRM--------NPAHYTVWQYRFSLLTSLN------------------------------ 102 (349)
T ss_dssp HHHHHTTCCSHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTT------------------------------
T ss_pred HHHHHhCCCCHHHHHHHHHHHHh--------CchhHHHHHHHHHHHHHhh------------------------------
Confidence 334444 4557899999999999 8999999999999998651
Q ss_pred cCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCCCchH
Q 011759 153 VNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSMEK 232 (478)
Q Consensus 153 ~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~l~~~~~~ 232 (478)
.+++.+++.++.++. ..++.
T Consensus 103 -----------------------------------------------------~~l~eEL~~~~~~L~-------~nPKn 122 (349)
T 3q7a_A 103 -----------------------------------------------------KSLEDELRLMNEFAV-------QNLKS 122 (349)
T ss_dssp -----------------------------------------------------CCHHHHHHHHHHHHH-------TTCCC
T ss_pred -----------------------------------------------------hhHHHHHHHHHHHHH-------hCCCc
Confidence 135555656655543 24566
Q ss_pred HHHHHHHHHHHHhc-C-CHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCch--------HHHHHHHHHH
Q 011759 233 VDILSALAEVALER-E-DIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQ--------EAIPYCQKAI 302 (478)
Q Consensus 233 Ad~~~~LGev~le~-g-~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~e--------eAl~~~ekAL 302 (478)
..+++..+.+.... + ++++++.++.++|.+..+.+ .+++..+.++...++++ ++++++.++|
T Consensus 123 y~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy--------~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I 194 (349)
T 3q7a_A 123 YQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNY--------HTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEML 194 (349)
T ss_dssp HHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCH--------HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCH--------HHHHHHHHHHHHhccccccchhhHHHHHHHHHHHH
Confidence 78888889988887 7 89999999988887655543 88999999999888888 8999999888
Q ss_pred HHH
Q 011759 303 SVC 305 (478)
Q Consensus 303 ~I~ 305 (478)
++-
T Consensus 195 ~~d 197 (349)
T 3q7a_A 195 RVD 197 (349)
T ss_dssp HHC
T ss_pred HhC
Confidence 763
No 213
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=96.74 E-value=0.012 Score=60.03 Aligned_cols=136 Identities=8% Similarity=-0.119 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCC
Q 011759 66 ADELMEKGTNALKES-DYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (478)
Q Consensus 66 A~~L~~~G~~~~~~g-dy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~ 144 (478)
......+|..+...+ +|++++.++.+++.+ +|++..+++.-|.+|..+. +.
T Consensus 88 ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~--------nPKny~aW~hR~wlL~~l~-------~~------------- 139 (349)
T 3q7a_A 88 YTVWQYRFSLLTSLNKSLEDELRLMNEFAVQ--------NLKSYQVWHHRLLLLDRIS-------PQ------------- 139 (349)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHT--------TCCCHHHHHHHHHHHHHHC-------CS-------------
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHhc-------CC-------------
Confidence 344677888888899 599999999999987 8999999999999998760 00
Q ss_pred CccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011759 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 224 (478)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek 224 (478)
++ +.++.++.+
T Consensus 140 --------------------------------------------------------------~~-------~~EL~~~~k 150 (349)
T 3q7a_A 140 --------------------------------------------------------------DP-------VSEIEYIHG 150 (349)
T ss_dssp --------------------------------------------------------------CC-------HHHHHHHHH
T ss_pred --------------------------------------------------------------Ch-------HHHHHHHHH
Confidence 01 122334444
Q ss_pred hcCCCchHHHHHHHHHHHHHhcCCHH--------HHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCC------
Q 011759 225 HWGDSMEKVDILSALAEVALEREDIE--------TSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSK------ 290 (478)
Q Consensus 225 ~l~~~~~~Ad~~~~LGev~le~g~fe--------eAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~------ 290 (478)
.+...++-..+++..+-+....++|+ +++.++.+++++....+ .++++.+.++...++
T Consensus 151 ~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~--------SAW~~R~~lL~~l~~~~~~~~ 222 (349)
T 3q7a_A 151 SLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNN--------SAWGWRWYLRVSRPGAETSSR 222 (349)
T ss_dssp HTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCH--------HHHHHHHHHHTTSTTCCCCHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCH--------HHHHHHHHHHHhccccccchH
Confidence 44444555667777777777777777 89999999988766554 899999999999987
Q ss_pred -chHHHHHHHHHHHHHH
Q 011759 291 -PQEAIPYCQKAISVCK 306 (478)
Q Consensus 291 -~eeAl~~~ekAL~I~k 306 (478)
+++++++++++|.+..
T Consensus 223 ~~~eELe~~~~aI~~~P 239 (349)
T 3q7a_A 223 SLQDELIYILKSIHLIP 239 (349)
T ss_dssp HHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHhCC
Confidence 6899999999987643
No 214
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=96.63 E-value=0.015 Score=58.73 Aligned_cols=134 Identities=7% Similarity=-0.138 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcC
Q 011759 68 ELMEKGTNALKESD----------YGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEG 137 (478)
Q Consensus 68 ~L~~~G~~~~~~gd----------y~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~ 137 (478)
....+|..+...++ |.+++.++..++.+ +|.+..+++.-|.+|..+++
T Consensus 66 aWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~--------~PKny~aW~hR~wlL~~l~~-------------- 123 (331)
T 3dss_A 66 LWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV--------NPKSYGTWHHRCWLLSRLPE-------------- 123 (331)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHCSS--------------
T ss_pred HHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHhccCc--------------
Confidence 34455555555444 78899999999887 89999999999999986510
Q ss_pred CCCCCCCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHH
Q 011759 138 DSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDV 217 (478)
Q Consensus 138 e~~~~~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~ 217 (478)
.+++.++++++.
T Consensus 124 --------------------------------------------------------------------~~~~~EL~~~~k 135 (331)
T 3dss_A 124 --------------------------------------------------------------------PNWARELELCAR 135 (331)
T ss_dssp --------------------------------------------------------------------CCHHHHHHHHHH
T ss_pred --------------------------------------------------------------------ccHHHHHHHHHH
Confidence 134555656665
Q ss_pred HHHHHHHhcCCCchHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcC--------
Q 011759 218 ARAIAEKHWGDSMEKVDILSALAEVALERED-IETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIG-------- 288 (478)
Q Consensus 218 Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~-feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~-------- 288 (478)
++.+ +++-..+++.-+-|....++ +++++.++.+++.+.... ..++++++.++...
T Consensus 136 ~l~~-------dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N--------~SAW~~R~~ll~~l~~~~~~~~ 200 (331)
T 3dss_A 136 FLEA-------DERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSN--------YSSWHYRSCLLPQLHPQPDSGP 200 (331)
T ss_dssp HHHH-------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCC--------HHHHHHHHHHHHHHSCCC----
T ss_pred HHHh-------CCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCC--------HHHHHHHHHHHHHhhhcccccc
Confidence 5543 34556788888999999998 699999999999765444 37888888888766
Q ss_pred ------CCchHHHHHHHHHHHHHH
Q 011759 289 ------SKPQEAIPYCQKAISVCK 306 (478)
Q Consensus 289 ------~~~eeAl~~~ekAL~I~k 306 (478)
+.++++++++.++|.+..
T Consensus 201 ~~~~~~~~~~eEle~~~~ai~~~P 224 (331)
T 3dss_A 201 QGRLPENVLLKELELVQNAFFTDP 224 (331)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHST
T ss_pred ccccchHHHHHHHHHHHHHHHhCC
Confidence 457889999999987754
No 215
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=96.44 E-value=0.019 Score=52.06 Aligned_cols=56 Identities=18% Similarity=0.105 Sum_probs=44.1
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERM 266 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~l 266 (478)
.+++.+..+|+.... .. ...+..+|+++||-.|..+++|++|+.+++++|+|.+..
T Consensus 49 ~~~~~gI~lLe~ll~---~~--~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n 104 (152)
T 1pc2_A 49 DDIRKGIVLLEELLP---KG--SKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQN 104 (152)
T ss_dssp HHHHHHHHHHHHHHH---HS--CHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHh---cC--CccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC
Confidence 567778777765443 21 112678999999999999999999999999999998643
No 216
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.09 E-value=0.13 Score=47.33 Aligned_cols=107 Identities=7% Similarity=-0.047 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCCh-hHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCC
Q 011759 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELAL-ECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (478)
Q Consensus 67 ~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~p-e~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~ 145 (478)
-.|+.+.+.++..+.|+.|+-++.-++.+...--.-..| .-+.++++||.+||..
T Consensus 21 ~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~------------------------ 76 (167)
T 3ffl_A 21 MNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHD------------------------ 76 (167)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcc------------------------
Confidence 357889999999999999999999999985332222233 4568999999999964
Q ss_pred ccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011759 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 225 (478)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~ 225 (478)
..|-.|...|..|+.+....
T Consensus 77 ------------------------------------------------------------~eyrrA~~~y~qALq~~k~l 96 (167)
T 3ffl_A 77 ------------------------------------------------------------KEYRNAVSKYTMALQQKKAL 96 (167)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHHHHCC
T ss_pred ------------------------------------------------------------cHHHHHHHHHHHHHHHHHHH
Confidence 45777888888887766532
Q ss_pred cCC------------------CchHHHHHHHHHHHHHhcCCHHHHHHHHH
Q 011759 226 WGD------------------SMEKVDILSALAEVALEREDIETSLSDYQ 257 (478)
Q Consensus 226 l~~------------------~~~~Ad~~~~LGev~le~g~feeAl~dy~ 257 (478)
... ...-+++.+.++.++++.+++.+||..++
T Consensus 97 ~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le 146 (167)
T 3ffl_A 97 SKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILD 146 (167)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 211 11235788999999999999999988754
No 217
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=95.88 E-value=0.18 Score=50.49 Aligned_cols=88 Identities=6% Similarity=-0.050 Sum_probs=55.4
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC--ChHHHHHHHHHHHH
Q 011759 207 DLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPD--SRHIAELNFRICLC 284 (478)
Q Consensus 207 dle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d--~r~iAea~~~LG~a 284 (478)
+++.||.+|+... ...+........+. +++.+|+|++|...+++.+++...+-..+ .+.-+.++.|+..+
T Consensus 193 ~~q~A~~~f~El~-------~~~p~~~~~~lLln-~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l 264 (310)
T 3mv2_B 193 TATSNFYYYEELS-------QTFPTWKTQLGLLN-LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITL 264 (310)
T ss_dssp TTTHHHHHHHHHH-------TTSCSHHHHHHHHH-HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH-------HhCCCcccHHHHHH-HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHH
Confidence 3455666665532 22222222233333 89999999999999998777764431110 12237889898888
Q ss_pred HHcCCCchHHHHHHHHHHHH
Q 011759 285 LEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 285 y~~~~~~eeAl~~~ekAL~I 304 (478)
+..+|+ +|.++++++..+
T Consensus 265 ~~~lgk--~a~~l~~qL~~~ 282 (310)
T 3mv2_B 265 ALMQGL--DTEDLTNQLVKL 282 (310)
T ss_dssp HHHTTC--TTHHHHHHHHHT
T ss_pred HHHhCh--HHHHHHHHHHHh
Confidence 888887 777777665543
No 218
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=95.44 E-value=0.063 Score=47.61 Aligned_cols=89 Identities=12% Similarity=0.063 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCc
Q 011759 212 WKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKP 291 (478)
Q Consensus 212 wE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~ 291 (478)
.+-|.+.+..|.+... ..-..++-+++|...+...+- .+.++++.|.+.++..+....=+++|.|++.|.+.|+|
T Consensus 20 ~eeL~~l~~qy~~E~~-~~vs~qt~F~yAw~Lv~S~~~----~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY 94 (134)
T 3o48_A 20 PQQLEILRQQVVSEGG-PTATIQSRFNYAWGLIKSTDV----NDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEY 94 (134)
T ss_dssp HHHHHHHHHHHHHTTG-GGSCHHHHHHHHHHHHHSSCH----HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHhC-CCCChhhHHHHHHHHHcCCCH----HHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhH
Confidence 3456778888887642 222468999999999988764 34556666666666433224569999999999999999
Q ss_pred hHHHHHHHHHHHHH
Q 011759 292 QEAIPYCQKAISVC 305 (478)
Q Consensus 292 eeAl~~~ekAL~I~ 305 (478)
.+|+.+.+..|++-
T Consensus 95 ~~Ar~y~d~lL~~e 108 (134)
T 3o48_A 95 SMAKRYVDTLFEHE 108 (134)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhhC
Confidence 99999999988774
No 219
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=95.40 E-value=0.12 Score=53.45 Aligned_cols=100 Identities=11% Similarity=0.001 Sum_probs=84.6
Q ss_pred CcChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 011759 204 DESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICL 283 (478)
Q Consensus 204 d~ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ 283 (478)
+.++|+.|.+++...+.-+.+ +++...+.++|...-.+|...+|+..+...|.+|..+.-.++ .+.+..|.....-|.
T Consensus 111 ~~~~y~~a~~~i~~l~~~~~~-~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~-~~p~i~a~i~~~~Gi 188 (394)
T 3txn_A 111 DTALYTEALALGAQLLRELKK-LDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIY-CPPKVQGALDLQSGI 188 (394)
T ss_dssp HTTCHHHHHHHHHHHHHHHTT-SSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC-CCHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHHHhc-cccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCC-CCHHHHHHHHHHhhH
Confidence 347888898888777765544 445678899999999999999999999999999999998775 445568999999999
Q ss_pred HHH-cCCCchHHHHHHHHHHHHH
Q 011759 284 CLE-IGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 284 ay~-~~~~~eeAl~~~ekAL~I~ 305 (478)
.|. ..++|..|..+|-.|+.-+
T Consensus 189 ~~l~~~rdyk~A~~~F~eaf~~f 211 (394)
T 3txn_A 189 LHAADERDFKTAFSYFYEAFEGF 211 (394)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHhccCHHHHHHHHHHHHhcc
Confidence 999 9999999999999887544
No 220
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=95.15 E-value=0.2 Score=51.16 Aligned_cols=68 Identities=9% Similarity=0.037 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHH
Q 011759 233 VDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSR 308 (478)
Q Consensus 233 Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k~r 308 (478)
..+...+++.++..|+|.+|+..+.+.+.+..-. =..|..|-.+|...|+..+|+.+|++.-..+...
T Consensus 171 ~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~--------E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~e 238 (388)
T 2ff4_A 171 VLAHTAKAEAEIACGRASAVIAELEALTFEHPYR--------EPLWTQLITAYYLSDRQSDALGAYRRVKTTLADD 238 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC--------HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 4567778999999999999999998887654321 2578899999999999999999999988877654
No 221
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=95.13 E-value=0.11 Score=51.80 Aligned_cols=64 Identities=11% Similarity=0.032 Sum_probs=49.2
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchH-HHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHhcCCCChHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEK-VDILSALAEVALER-EDIETSLSDYQKALTILERMVEPDSRHIAELN 278 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~-Ad~~~~LGev~le~-g~feeAl~dy~kAL~I~~~llg~d~r~iAea~ 278 (478)
++.+.|.++|++|+.| .+.. ++++...|+.++.. ++++.|..+++++|.+-....| ++.++...
T Consensus 218 Gd~ekA~~~ferAL~L-------nP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~~P--~~~lan~~ 283 (301)
T 3u64_A 218 GGMEKAHTAFEHLTRY-------CSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPESVP--HNKLLVIL 283 (301)
T ss_dssp CCHHHHHHHHHHHHHH-------CCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGGCS--SCHHHHHH
T ss_pred CCHHHHHHHHHHHHHh-------CCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCC--ChhHHHHH
Confidence 5677888899988887 3443 88999999999985 9999999999999987665432 24445443
No 222
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=95.08 E-value=0.12 Score=46.43 Aligned_cols=85 Identities=14% Similarity=0.121 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcC--CCChHHHHHHHHHHHHHHcCCC
Q 011759 213 KMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVE--PDSRHIAELNFRICLCLEIGSK 290 (478)
Q Consensus 213 E~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg--~d~r~iAea~~~LG~ay~~~~~ 290 (478)
+-|...|.-|.+.... .-..++-+++|.......+-. +-++.+.|.+.++. +..+ =+++|.|++.|.+.++
T Consensus 20 eeL~~lr~qY~~E~~~-~vs~~t~F~YAw~Lv~S~~~~----di~~GI~LLe~l~~~~~~~~--RdcLYyLAvg~ykl~~ 92 (144)
T 1y8m_A 20 QQLEILRQQVVSEGGP-TATIQSRFNYAWGLIKSTDVN----DERLGVKILTDIYKEAESRR--RECLYYLTIGCYKLGE 92 (144)
T ss_dssp HHHHHHHHHHHHTTST-TSCHHHHHHHHHHHHHSSSHH----HHHHHHHHHHHHHHHCCSTH--HHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHcCCCHH----HHHHHHHHHHHHHhcCccch--hHHHHHHHHHHHHhhh
Confidence 3456778888876333 346789999999999888754 34455555555553 3334 3899999999999999
Q ss_pred chHHHHHHHHHHHH
Q 011759 291 PQEAIPYCQKAISV 304 (478)
Q Consensus 291 ~eeAl~~~ekAL~I 304 (478)
|.+|+.+.+..|++
T Consensus 93 Y~~Ar~y~d~lL~~ 106 (144)
T 1y8m_A 93 YSMAKRYVDTLFEH 106 (144)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988865
No 223
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.02 E-value=1 Score=46.93 Aligned_cols=117 Identities=16% Similarity=0.077 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCC-hhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCC
Q 011759 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELA-LECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQ 141 (478)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~-pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~ 141 (478)
.++|.--..++..+...|+|.+|++++++. +.+.+|.+. .+..++|+.--+.++..
T Consensus 134 ~erarl~~~La~i~e~~g~~~eA~~iL~~l---~~Et~~~~~~~~kve~~l~q~rl~l~~-------------------- 190 (445)
T 4b4t_P 134 VERARVTKDLVEIKKEEGKIDEAADILCEL---QVETYGSMEMSEKIQFILEQMELSILK-------------------- 190 (445)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHH---HHHHCSSSCHHHHHHHHHHHHHHHHHH--------------------
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHH---HHHHHhcccHHHHHHHHHHHHHHHHHC--------------------
Confidence 356777778999999999999999998765 577888654 46677777777766654
Q ss_pred CCCCccccccccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHH
Q 011759 142 GSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAI 221 (478)
Q Consensus 142 ~~~~de~~~~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I 221 (478)
+|+..|...+..++..
T Consensus 191 ----------------------------------------------------------------~d~~~a~~~~~ki~~~ 206 (445)
T 4b4t_P 191 ----------------------------------------------------------------GDYSQATVLSRKILKK 206 (445)
T ss_dssp ----------------------------------------------------------------TCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------------------CCHHHHHHHHHHHHHh
Confidence 4567777777777654
Q ss_pred HHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 011759 222 AEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERM 266 (478)
Q Consensus 222 ~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~l 266 (478)
+........-.+..|..+|.++...++|.+|..+|..++......
T Consensus 207 ~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~~~~~ 251 (445)
T 4b4t_P 207 TFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQTDAIK 251 (445)
T ss_dssp HHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred hcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhccccc
Confidence 444333334568899999999999999999999999999876654
No 224
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=94.19 E-value=0.34 Score=53.36 Aligned_cols=85 Identities=12% Similarity=0.077 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 011759 208 LDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALERED-IETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 286 (478)
Q Consensus 208 le~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~-feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~ 286 (478)
++.|..+|+.|+... ......+|...+.+-...++ ++.|...|+++|+... +++.+- ...+..+.
T Consensus 450 l~~AR~vf~~A~~~~------~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p-----~~~~~w---~~y~~fe~ 515 (679)
T 4e6h_A 450 LAASRKIFGKCRRLK------KLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFA-----TDGEYI---NKYLDFLI 515 (679)
T ss_dssp HHHHHHHHHHHHHTG------GGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHT-----TCHHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHhc------CCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCC-----CchHHH---HHHHHHHH
Confidence 445555555555320 11124566677777766654 8999999999998643 333333 23333445
Q ss_pred cCCCchHHHHHHHHHHHHHH
Q 011759 287 IGSKPQEAIPYCQKAISVCK 306 (478)
Q Consensus 287 ~~~~~eeAl~~~ekAL~I~k 306 (478)
..++.+.|...|++|+..+.
T Consensus 516 ~~~~~~~AR~lferal~~~~ 535 (679)
T 4e6h_A 516 YVNEESQVKSLFESSIDKIS 535 (679)
T ss_dssp HHTCHHHHHHHHHHHTTTSS
T ss_pred hCCCHHHHHHHHHHHHHhcC
Confidence 56889999999999887543
No 225
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=94.14 E-value=0.52 Score=51.90 Aligned_cols=94 Identities=3% Similarity=-0.084 Sum_probs=64.7
Q ss_pred ChHHHHHHHHHHHHHHHHHhc-------CC--------CchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC
Q 011759 206 SDLDLAWKMLDVARAIAEKHW-------GD--------SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPD 270 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l-------~~--------~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d 270 (478)
++++.|.++|+.++..+.+.. .. +.....+|...+....+.++++.|...|.+|++.. +..
T Consensus 392 ~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~----~~~ 467 (679)
T 4e6h_A 392 TKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLK----KLV 467 (679)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTG----GGS
T ss_pred CCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc----CCC
Confidence 567888888888877642211 10 01356688889999889999999999999998762 211
Q ss_pred ChHHHHHHHHHHHHHHcC-CCchHHHHHHHHHHHHHH
Q 011759 271 SRHIAELNFRICLCLEIG-SKPQEAIPYCQKAISVCK 306 (478)
Q Consensus 271 ~r~iAea~~~LG~ay~~~-~~~eeAl~~~ekAL~I~k 306 (478)
. ..+|...+...... ++++.|...|+++|..+.
T Consensus 468 ~---~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p 501 (679)
T 4e6h_A 468 T---PDIYLENAYIEYHISKDTKTACKVLELGLKYFA 501 (679)
T ss_dssp C---THHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHT
T ss_pred C---hHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCC
Confidence 1 23444555554444 458999999999998765
No 226
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=93.93 E-value=2 Score=44.24 Aligned_cols=131 Identities=15% Similarity=0.027 Sum_probs=91.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccCCCCCCcCCCCCCCCCccccc
Q 011759 71 EKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVK 150 (478)
Q Consensus 71 ~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg~~~~~~~e~~~~~~~de~~~ 150 (478)
.+|..++..|+|.+|..++.+.+.-+... +...-+-++|..--+.++.+
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~--dd~~~llev~lle~~~~~~~----------------------------- 152 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKL--DDKNLLVEVQLLESKTYHAL----------------------------- 152 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTS--SCTHHHHHHHHHHHHHHHHT-----------------------------
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhcc--ccchhHHHHHHHHHHHHHHh-----------------------------
Confidence 78999999999999999999988866432 22334445555544444432
Q ss_pred cccCCCCCccCCCCcccccCCCCCcCcccCCCCCCCCCccCCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCCCc
Q 011759 151 NAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSM 230 (478)
Q Consensus 151 ~~~~~e~a~~~~s~~~~~~~~~~~~d~~~~dv~~e~~ed~e~~~~E~~~e~eEd~ddle~AwE~Le~Ar~I~ek~l~~~~ 230 (478)
.++..+...|..|+.+......++.
T Consensus 153 -------------------------------------------------------~n~~k~k~~l~~a~~~~~ai~~~p~ 177 (394)
T 3txn_A 153 -------------------------------------------------------SNLPKARAALTSARTTANAIYCPPK 177 (394)
T ss_dssp -------------------------------------------------------TCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred -------------------------------------------------------ccHHHHHHHHHHHHhhhccCCCCHH
Confidence 4677788888999888765433334
Q ss_pred hHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCC
Q 011759 231 EKVDILSALAEVAL-EREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSK 290 (478)
Q Consensus 231 ~~Ad~~~~LGev~l-e~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~ 290 (478)
-.+.....-|.+++ ..++|..|..+|-.|+.-+.. -.++.--.++..+++|-...+.
T Consensus 178 i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~~---~~~~~~~~~lkYlvL~aLl~~~ 235 (394)
T 3txn_A 178 VQGALDLQSGILHAADERDFKTAFSYFYEAFEGFDS---VDSVKALTSLKYMLLCKIMLGQ 235 (394)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTT---TCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhcccc---cccHHHHHHHHHHHHHHHHcCC
Confidence 56888888999999 999999999999999744332 2334333444456666666554
No 227
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=93.14 E-value=0.15 Score=54.21 Aligned_cols=63 Identities=17% Similarity=0.211 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 234 DILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 234 d~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
.|+..||+++.-...+..|..+|.+|+.+.... ...|++||+.+...+++=+|+-||-|+|.+
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~--------G~~~nqLavla~~~~~~l~a~y~y~rsl~~ 215 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSN--------GQPYNQLAILASSKGDHLTTIFYYCRSIAV 215 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTB--------SHHHHHHHHHHHHTTCHHHHHHHHHHHHSS
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCC--------CchHHHHHHHHhcccccHHHHHHHHHHHhc
Confidence 488999999999999999999999999998765 489999999999999999999999999875
No 228
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=91.82 E-value=0.48 Score=50.73 Aligned_cols=68 Identities=16% Similarity=0.065 Sum_probs=58.6
Q ss_pred chHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC---ChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Q 011759 230 MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPD---SRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (478)
Q Consensus 230 ~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d---~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~ 303 (478)
...+.+++.|=..|+..+.|++|.....++. +|.. +.+.+.=+|.+|.++..+++|.+|..|+..|+.
T Consensus 228 ~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~------fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~r 298 (523)
T 4b4t_S 228 ETKAMLINLILRDFLNNGEVDSASDFISKLE------YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIR 298 (523)
T ss_dssp CHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC------SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTS
T ss_pred chhHHHHHHHHHHHHccCcHHHHHHHHhcCc------CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 4578999999999999999999998888763 5543 356788889999999999999999999999885
No 229
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=91.57 E-value=0.31 Score=44.27 Aligned_cols=83 Identities=13% Similarity=0.065 Sum_probs=68.9
Q ss_pred chHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHH
Q 011759 230 MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRV 309 (478)
Q Consensus 230 ~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k~rl 309 (478)
...+..+...+.. .+.++.++|...|+.|+.+ |...|-+|...+.--.++|++..|...+.+||.++..-.
T Consensus 58 rrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~--------hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~ 128 (161)
T 4h7y_A 58 ESFARIQVRFAEL-KAIQEPDDARDYFQMARAN--------CKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPL 128 (161)
T ss_dssp HHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHH--------CTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCH
T ss_pred HHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcH
Confidence 4578888888865 7889999999999999997 333378888888877889999999999999999988777
Q ss_pred HHHHHHHHhhcc
Q 011759 310 QRLLNEVKSLGE 321 (478)
Q Consensus 310 ~~l~~~l~~~~~ 321 (478)
+.|+..|..+..
T Consensus 129 ~~le~a~~nl~~ 140 (161)
T 4h7y_A 129 EMLEIALRNLNL 140 (161)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHhhhc
Confidence 777777777754
No 230
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=91.30 E-value=1.4 Score=37.96 Aligned_cols=61 Identities=16% Similarity=0.129 Sum_probs=46.0
Q ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh-CC-CChhHHHHHHHHHHHHHhh
Q 011759 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-GE-LALECVNAYYQYGRALLYK 121 (478)
Q Consensus 61 ~~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~-Ge-~~pe~A~~y~~YG~ALl~~ 121 (478)
..+..|..|+.++..+-..|+|++|+.+|.+|++++.... .+ ..+..-..|-..-.-|+..
T Consensus 13 ~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~alk~e~~~~~~k~~lr~K~~eYl~R 75 (117)
T 2cpt_A 13 PNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDR 75 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Confidence 3678899999999999999999999999999999877654 44 5666444444444444433
No 231
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=90.92 E-value=0.84 Score=47.14 Aligned_cols=96 Identities=15% Similarity=0.062 Sum_probs=75.1
Q ss_pred cCcChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 011759 203 EDESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC 282 (478)
Q Consensus 203 Ed~ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG 282 (478)
.+.+|++.|.+.|..+|.-. .. .....+++..+-.+++..++|..+..++.++..+.... .+..........-|
T Consensus 142 ~~~Gd~~~A~~~~~~~~~~~-~~---~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~--~d~~~~~~lk~~~g 215 (429)
T 4b4t_R 142 AQIGDKDNAEKTLGKSLSKA-IS---TGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKG--GDWERRNRYKTYYG 215 (429)
T ss_dssp HHHCCCTTHHHHHHHHHHHH-TC---CCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTC--CCTHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhc-CC---hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcC--CCHHHHHHHHHHHH
Confidence 35577777888777766522 11 23578999999999999999999999999998877653 45555677778889
Q ss_pred HHHHcCCCchHHHHHHHHHHHH
Q 011759 283 LCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 283 ~ay~~~~~~eeAl~~~ekAL~I 304 (478)
+.+...++|..|..+|-.++..
T Consensus 216 l~~l~~r~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 216 IHCLAVRNFKEAAKLLVDSLAT 237 (429)
T ss_dssp HGGGGTSCHHHHHHHHHHHHHH
T ss_pred HHHHHhChHHHHHHHHHHHhcc
Confidence 9999999999999999776543
No 232
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=90.60 E-value=0.79 Score=40.05 Aligned_cols=59 Identities=17% Similarity=0.193 Sum_probs=48.7
Q ss_pred ChHHHHHHHH--------HHHHHHHHHhcCCC-c-hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKML--------DVARAIAEKHWGDS-M-EKVDILSALAEVALEREDIETSLSDYQKALTILE 264 (478)
Q Consensus 206 ddle~AwE~L--------e~Ar~I~ek~l~~~-~-~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~ 264 (478)
..|..||.+. ..++.+++...... + ..-+|++.||--+..+|+|+.|+.+++.+|++.+
T Consensus 37 ~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP 105 (126)
T 1nzn_A 37 TQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEP 105 (126)
T ss_dssp HHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCC
Confidence 5799999654 45667777766544 3 6789999999999999999999999999999875
No 233
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=90.27 E-value=0.37 Score=49.51 Aligned_cols=88 Identities=14% Similarity=0.108 Sum_probs=56.7
Q ss_pred HHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCH----HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCc
Q 011759 216 DVARAIAEKHWGDSMEKVDILSALAEVALEREDI----ETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKP 291 (478)
Q Consensus 216 e~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~f----eeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~ 291 (478)
..|+.+|++.+...|..+.+|..|+.+|+....+ ...+.-+..++.-...+ ...+..+.+|.-+++++.+.|++
T Consensus 216 ~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~--~~~~~~a~~~~alal~~l~~gd~ 293 (372)
T 3ly7_A 216 NRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTL--PELNNLSIIYQIKAVSALVKGKT 293 (372)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTC--GGGTTCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhc--ccCCcCHHHHHHHHHHHHhCCCH
Confidence 4556666666554567777777777777532111 12333444455422221 22344567888899999999999
Q ss_pred hHHHHHHHHHHHHH
Q 011759 292 QEAIPYCQKAISVC 305 (478)
Q Consensus 292 eeAl~~~ekAL~I~ 305 (478)
++|+.++++||.+-
T Consensus 294 d~A~~~l~rAl~Ln 307 (372)
T 3ly7_A 294 DESYQAINTGIDLE 307 (372)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999873
No 234
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=90.27 E-value=1.2 Score=43.66 Aligned_cols=73 Identities=25% Similarity=0.271 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHhcCCH---HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHH-HHHHcCCCchHHHHHHHHHHHH
Q 011759 232 KVDILSALAEVALEREDI---ETSLSDYQKALTILERMVEPDSRHIAELNFRIC-LCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 232 ~Ad~~~~LGev~le~g~f---eeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG-~ay~~~~~~eeAl~~~ekAL~I 304 (478)
.++.|.-|+++.....+. +.|...|++|+.|....++|.||.---...|.+ +-|+.+++.++|+..-++|+.-
T Consensus 131 KGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~ 207 (260)
T 1o9d_A 131 KGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (260)
T ss_dssp HHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 477888888876544333 588999999999999999999987433333333 3445689999998887777653
No 235
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=90.13 E-value=0.39 Score=49.67 Aligned_cols=88 Identities=13% Similarity=0.005 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCch
Q 011759 213 KMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQ 292 (478)
Q Consensus 213 E~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~e 292 (478)
+-|+..+..+++.......+.+++..||+.|++.|+|+.|+..|.+.... ..+. .+..+.++.+-.++.+.++|.
T Consensus 111 ~~l~~~~~~~~~~~~~e~e~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~---~~~~--~~kid~~l~~irl~l~~~d~~ 185 (429)
T 4b4t_R 111 KELNEKIQKLEEDDEGELEQAQAWINLGEYYAQIGDKDNAEKTLGKSLSK---AIST--GAKIDVMLTIARLGFFYNDQL 185 (429)
T ss_dssp HHHHHHHHHHHHCCSCCCCCSSCCHHHHHHHHHHCCCTTHHHHHHHHHHH---HTCC--CSHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---cCCh--HHHHHHHHHHHHHHHHhccHH
Confidence 34455555554432223456789999999999999999999999986553 3433 345688888888888999999
Q ss_pred HHHHHHHHHHHHH
Q 011759 293 EAIPYCQKAISVC 305 (478)
Q Consensus 293 eAl~~~ekAL~I~ 305 (478)
.+..++.++..++
T Consensus 186 ~~~~~~~ka~~~~ 198 (429)
T 4b4t_R 186 YVKEKLEAVNSMI 198 (429)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998775
No 236
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=89.54 E-value=1.9 Score=34.51 Aligned_cols=60 Identities=15% Similarity=0.072 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh-CCCChhHHHHHHHHHHHHHh
Q 011759 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-GELALECVNAYYQYGRALLY 120 (478)
Q Consensus 61 ~~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~-Ge~~pe~A~~y~~YG~ALl~ 120 (478)
..+..|..|+.+|...-..|+|++|+.+|.+|++++.... .+..|..-..+-..-.-|+.
T Consensus 8 ~~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~a~k~e~~~~~k~~l~~k~~eYl~ 68 (85)
T 2v6x_A 8 DFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLALKYEKNPKSKDLIRAKFTEYLN 68 (85)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 3677899999999999999999999999999999876543 34556655555444444443
No 237
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=89.52 E-value=1.6 Score=41.83 Aligned_cols=72 Identities=15% Similarity=0.026 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChH-HHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Q 011759 232 KVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRH-IAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 232 ~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~-iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~ 305 (478)
.+|-|.-|+++. .|+-+.|...|+.|+.|....++|.||. +.-+++.=-+-|+.+++.++|+..-++|+.+.
T Consensus 126 KGDYyRYlAE~~--~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~ 198 (227)
T 2o8p_A 126 KSDISRYKLEFG--LCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKIL 198 (227)
T ss_dssp HHHHHHHHHHTT--SSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHc--cccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 477888888865 4559999999999999999989999986 44444443445568899999999999998853
No 238
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=89.25 E-value=1.8 Score=34.97 Aligned_cols=51 Identities=20% Similarity=0.120 Sum_probs=40.8
Q ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh-CCCChhHHHHH
Q 011759 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-GELALECVNAY 111 (478)
Q Consensus 61 ~~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~-Ge~~pe~A~~y 111 (478)
..+..|..|+.+|..+-..|+|.+|+.+|.+|++.+.... .+..+..-+.|
T Consensus 14 ~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~alk~e~d~~~k~~i 65 (83)
T 2w2u_A 14 MLEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLAQLVSLYRDGSTAAIY 65 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSTTSSTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 4678899999999999999999999999999999877642 23445544444
No 239
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=89.17 E-value=1.4 Score=42.39 Aligned_cols=72 Identities=29% Similarity=0.422 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH-HHcCCCchHHHHHHHHHHH
Q 011759 232 KVDILSALAEVALERED---IETSLSDYQKALTILERMVEPDSRHIAELNFRICLC-LEIGSKPQEAIPYCQKAIS 303 (478)
Q Consensus 232 ~Ad~~~~LGev~le~g~---feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~a-y~~~~~~eeAl~~~ekAL~ 303 (478)
.++.|.-|+++.....+ -+.|...|++|+.|....++|.||.---...|.+.- |+..++.++|+..-++|+.
T Consensus 129 KGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 129 KGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 47788888887654443 467889999999999999999999744444444433 4568888888887777664
No 240
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=89.16 E-value=2.5 Score=34.76 Aligned_cols=54 Identities=13% Similarity=0.183 Sum_probs=42.9
Q ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh-CCCChhHHHHHHHH
Q 011759 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-GELALECVNAYYQY 114 (478)
Q Consensus 61 ~~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~-Ge~~pe~A~~y~~Y 114 (478)
..+..|..|+.+|..+-..|+|.+|+.+|.+|++++.... .+..+..-..+-.-
T Consensus 10 ~~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~alk~e~~~~~k~~l~~K 64 (93)
T 1wfd_A 10 SDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTK 64 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 3567899999999999999999999999999999877654 45666655544433
No 241
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=88.50 E-value=0.92 Score=36.57 Aligned_cols=51 Identities=18% Similarity=0.101 Sum_probs=40.0
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh-CCCChhHHHHHH
Q 011759 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-GELALECVNAYY 112 (478)
Q Consensus 62 ~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~-Ge~~pe~A~~y~ 112 (478)
.+..|..|+.+|...-..|+|.+|+.+|.+|++.+.... .+..+..-+.|-
T Consensus 7 ~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~~lk~e~d~~~k~~ir 58 (83)
T 2v6y_A 7 LEDMARKYAILAVKADKEGKVEDAITYYKKAIEVLSQIIVLYPESVARTAYE 58 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCTTCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 467899999999999999999999999999999876642 334444444443
No 242
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=88.17 E-value=2.7 Score=34.08 Aligned_cols=50 Identities=14% Similarity=0.234 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh-CCCChhHHHHHHH
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-GELALECVNAYYQ 113 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~-Ge~~pe~A~~y~~ 113 (478)
..|..|+.++..+-..|+|.+|+.+|.+|++++.... .+..|..-..+-.
T Consensus 14 ~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~alk~e~d~~~k~~lr~ 64 (86)
T 4a5x_A 14 TAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLRE 64 (86)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHH
Confidence 4588899999999999999999999999999877655 5667766555443
No 243
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=88.12 E-value=1.8 Score=44.98 Aligned_cols=100 Identities=14% Similarity=0.005 Sum_probs=74.8
Q ss_pred cCcChHHHHHHHHHH-HHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 011759 203 EDESDLDLAWKMLDV-ARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRI 281 (478)
Q Consensus 203 Ed~ddle~AwE~Le~-Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~L 281 (478)
++.+++..|..+|.. -+..|. ..+.....++|.....+|++.++|.+|...+.++..-..... +.....+..|...
T Consensus 148 e~~g~~~eA~~iL~~l~~Et~~--~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~-~~~~lk~~~~~~~ 224 (445)
T 4b4t_P 148 KEEGKIDEAADILCELQVETYG--SMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNP-KYESLKLEYYNLL 224 (445)
T ss_dssp HHHTCHHHHHHHHHHHHHHHCS--SSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSS-CCHHHHHHHHHHH
T ss_pred HHccCHHHHHHHHHHHHHHHHh--cccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccC-CcHHHHHHHHHHH
Confidence 445778888777633 333332 123456899999999999999999999999999865433332 2334567788889
Q ss_pred HHHHHcCCCchHHHHHHHHHHHHH
Q 011759 282 CLCLEIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 282 G~ay~~~~~~eeAl~~~ekAL~I~ 305 (478)
|..|...++|.+|..+|..++...
T Consensus 225 ~~~~~~e~~y~~a~~~y~e~~~~~ 248 (445)
T 4b4t_P 225 VKISLHKREYLEVAQYLQEIYQTD 248 (445)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHHHHHhcc
Confidence 999999999999999999998764
No 244
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=87.98 E-value=2 Score=41.38 Aligned_cols=72 Identities=26% Similarity=0.268 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHH-HHHHcCCCchHHHHHHHHHHH
Q 011759 232 KVDILSALAEVALERED---IETSLSDYQKALTILERMVEPDSRHIAELNFRIC-LCLEIGSKPQEAIPYCQKAIS 303 (478)
Q Consensus 232 ~Ad~~~~LGev~le~g~---feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG-~ay~~~~~~eeAl~~~ekAL~ 303 (478)
.++.|.-|+++.....+ -+.|...|++|+.|....++|.||.---...|.+ +-|+..++.++|+..-++|+.
T Consensus 126 KGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 126 KGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 57788888887654333 3688999999999999999999987333333333 344568898888887777654
No 245
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=87.23 E-value=5.1 Score=44.76 Aligned_cols=59 Identities=17% Similarity=0.165 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHH
Q 011759 232 KVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYC 298 (478)
Q Consensus 232 ~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ 298 (478)
.+..+...++..+..++|+-|+..-++|..+...-+ .+||.|+.||..+++|+.|+-..
T Consensus 336 ~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF--------~tW~~La~vYi~l~d~e~ALLtL 394 (754)
T 4gns_B 336 MSDLLNIQTNFLLNRGDYELALGVSNTSTELALDSF--------ESWYNLARCHIKKEEYEKALFAI 394 (754)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCH--------HHHHHHHHHHHHTTCHHHHHHHH
T ss_pred chHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhh--------HHHHHHHHHHHHhccHHHHHHHH
Confidence 355777889999999999999999999999988777 89999999999999999998543
No 246
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, HOST-virus interaction, protein transport, transport; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=86.87 E-value=6.2 Score=40.19 Aligned_cols=57 Identities=14% Similarity=0.106 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHH--HhcCCCC---------hHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHH
Q 011759 252 SLSDYQKALTILE--RMVEPDS---------RHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSR 308 (478)
Q Consensus 252 Al~dy~kAL~I~~--~llg~d~---------r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k~r 308 (478)
+..+|+.|++... ..++..+ -..|.+||..|..+...++|.+||.+++.|...++..
T Consensus 241 ~~~~Y~~A~~~l~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a 308 (380)
T 3c3r_A 241 AADYFGDAFKQCQYKDTLPKEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIARLQHAAELIKTV 308 (380)
T ss_dssp HHHHHHHHHHHHTTCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH
Confidence 3456676666655 2233333 2347788999999999999999999999999876554
No 247
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=86.44 E-value=1.9 Score=41.80 Aligned_cols=72 Identities=26% Similarity=0.326 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHH-HHHHcCCCchHHHHHHHHHHH
Q 011759 232 KVDILSALAEVALERED---IETSLSDYQKALTILERMVEPDSRHIAELNFRIC-LCLEIGSKPQEAIPYCQKAIS 303 (478)
Q Consensus 232 ~Ad~~~~LGev~le~g~---feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG-~ay~~~~~~eeAl~~~ekAL~ 303 (478)
.++.|.-|+++.....+ -+.|...|++|+.|....++|.||.---...|.+ +-|+.+++.++|+..-++|+.
T Consensus 127 KGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 127 KGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 46777777777543332 3688999999999999999999987433333443 334568888888887777654
No 248
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=86.03 E-value=1.6 Score=36.28 Aligned_cols=41 Identities=17% Similarity=0.277 Sum_probs=35.5
Q ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhC
Q 011759 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYG 101 (478)
Q Consensus 61 ~~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~G 101 (478)
--+..|-.+-.++.+++..|+|++|++|+.+|+..+.+.+-
T Consensus 10 spLn~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eAmk 50 (97)
T 2crb_A 10 GPLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEAMK 50 (97)
T ss_dssp THHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHT
T ss_pred chhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 34667999999999999999999999999999998766553
No 249
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=85.74 E-value=4.4 Score=33.50 Aligned_cols=52 Identities=21% Similarity=0.291 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHH-HHHHHHHHhh
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAY-YQYGRALLYK 121 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y-~~YG~ALl~~ 121 (478)
..|..|+..|+.+|..++|.+|.-+|.++..+ -.+|++-.++ |.+|.|--.+
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~------ten~~i~ki~~fyl~ec~kkl 103 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNL------SDNEEIKKIASFYLEECRKKL 103 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHcc------ccCHHHHHHHHHHHHHHHHHh
Confidence 56999999999999999999999999999876 3589999999 8888886554
No 250
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=85.50 E-value=11 Score=31.15 Aligned_cols=72 Identities=18% Similarity=0.142 Sum_probs=48.1
Q ss_pred CchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHH
Q 011759 229 SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSR 308 (478)
Q Consensus 229 ~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k~r 308 (478)
++..|-.|...++-++..|+|++||+++++|..+..+.+--.. ...++..|-+ =.+++.+=+.+++.|
T Consensus 11 pLn~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eAmkltq--s~qa~~SLqL----------Qrd~HlKQ~~liq~r 78 (97)
T 2crb_A 11 PLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEAMKLTE--SEQAHLSLEL----------QRDSHMKQLLLIQER 78 (97)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH----------HHHHHHHHHHHHHHH
T ss_pred hhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhhc--cHHHHHHHHH----------HHHHHHHHHHHHHHH
Confidence 3567888999999999999999999999999988876654321 1122222211 234455566666666
Q ss_pred HHHH
Q 011759 309 VQRL 312 (478)
Q Consensus 309 l~~l 312 (478)
+..-
T Consensus 79 ~k~~ 82 (97)
T 2crb_A 79 WKRA 82 (97)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5543
No 251
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=85.05 E-value=7.9 Score=42.69 Aligned_cols=56 Identities=13% Similarity=0.077 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHH--HhcCCCC---------hHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHH
Q 011759 252 SLSDYQKALTILE--RMVEPDS---------RHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKS 307 (478)
Q Consensus 252 Al~dy~kAL~I~~--~llg~d~---------r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k~ 307 (478)
+..+|..|+.... ..++..+ -..|.+||..|..+...++|.+|+.+++.|...++.
T Consensus 226 ~~~~Y~~A~~~l~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~ 292 (704)
T 2xs1_A 226 AADYFGDAFKQCQYKDTLPKEVFPVLAAKHCIMQANAEYHQSILAKQQYYFGEEIARLQHAAELIKT 292 (704)
T ss_dssp HHHHHHHHHHHHHTCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhHHHHHHHHHHHHHHHHHH
Confidence 3456777766655 2233333 235778999999999999999999999999987754
No 252
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=84.82 E-value=12 Score=39.28 Aligned_cols=64 Identities=6% Similarity=-0.077 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Q 011759 233 VDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (478)
Q Consensus 233 Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~ 303 (478)
..+|+.|=..|...|++++|+..|++.++ .-+.|+ ..+|..|=.+|...|++++|...|++-.+
T Consensus 140 ~~tyn~lI~~~~~~g~~~~A~~l~~~M~~---~G~~Pd----~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~ 203 (501)
T 4g26_A 140 LRSYGPALFGFCRKGDADKAYEVDAHMVE---SEVVPE----EPELAALLKVSMDTKNADKVYKTLQRLRD 203 (501)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH---TTCCCC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cceehHHHHHHHHCCCHHHHHHHHHHHHh---cCCCCC----HHHHHHHHHHHhhCCCHHHHHHHHHHHHH
Confidence 56899999999999999999999987643 223333 36788899999999999999999988543
No 253
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=84.58 E-value=1.5 Score=38.66 Aligned_cols=59 Identities=10% Similarity=0.153 Sum_probs=46.2
Q ss_pred ChHHHHHHHH--------HHHHHHHHHhcCCC-chHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKML--------DVARAIAEKHWGDS-MEKVDILSALAEVALEREDIETSLSDYQKALTILE 264 (478)
Q Consensus 206 ddle~AwE~L--------e~Ar~I~ek~l~~~-~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~ 264 (478)
..|..||.+. ..++.+++..+... ...-+|+.-||.-+..+|+|+.|+.+.+.+|++.+
T Consensus 42 t~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP 109 (134)
T 3o48_A 42 SRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHER 109 (134)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCT
T ss_pred hHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCC
Confidence 5789999765 45556665554333 36789999999999999999999999998887754
No 254
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=84.58 E-value=3.1 Score=40.62 Aligned_cols=71 Identities=23% Similarity=0.314 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHH-HHHHcCCCchHHHHHHHHHHH
Q 011759 232 KVDILSALAEVALERED---IETSLSDYQKALTILERMVEPDSRHIAELNFRIC-LCLEIGSKPQEAIPYCQKAIS 303 (478)
Q Consensus 232 ~Ad~~~~LGev~le~g~---feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG-~ay~~~~~~eeAl~~~ekAL~ 303 (478)
.++.|.-|+++.....+ -+.|...|++|+.|. ..++|.||.---...|.+ +-|+.+++.++|+..-++|+.
T Consensus 152 KGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 152 KGDYHRYISEFSTGDSKQSSAEDALKAYKDATVVA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred hccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 47788888887654433 368899999999999 889999987433333333 334458898888887777664
No 255
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=84.45 E-value=9.7 Score=38.69 Aligned_cols=39 Identities=21% Similarity=-0.076 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHH
Q 011759 274 IAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQRL 312 (478)
Q Consensus 274 iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k~rl~~l 312 (478)
.|.+||..|..+...++|.+||.+++.|...++.-....
T Consensus 252 ~A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~l~~a~~~~ 290 (376)
T 3r9m_A 252 TAYAYCYHGETLLASDKCGEAIRSLQEAEKLYAKAEALC 290 (376)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHH
Confidence 588999999999999999999999999999887654443
No 256
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=84.31 E-value=5 Score=32.06 Aligned_cols=37 Identities=8% Similarity=0.001 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHH
Q 011759 274 IAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQ 310 (478)
Q Consensus 274 iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k~rl~ 310 (478)
-|..+.+.++-....|+|++|+.+|..|++.|..-+.
T Consensus 12 ~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~a~k 48 (85)
T 2v6x_A 12 KGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLALK 48 (85)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 4455566666778899999999999999998776654
No 257
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=83.94 E-value=2.7 Score=38.76 Aligned_cols=90 Identities=18% Similarity=0.137 Sum_probs=52.7
Q ss_pred ChHHHHHHH--HHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-----hcCCCC--hHHHH
Q 011759 206 SDLDLAWKM--LDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILER-----MVEPDS--RHIAE 276 (478)
Q Consensus 206 ddle~AwE~--Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~-----llg~d~--r~iAe 276 (478)
..|++|.+. |++|+.|.+.. +.-..|..||+..+..|+++-|..+|+++=++-.- +.|... ..++.
T Consensus 10 ~rF~LAL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kla~ 84 (177)
T 3mkq_B 10 IRFDLALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQN 84 (177)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHH
Confidence 345555543 45555554432 23568999999999999999999999987444332 222110 11111
Q ss_pred H-----HHHH-HHHHHcCCCchHHHHHHHH
Q 011759 277 L-----NFRI-CLCLEIGSKPQEAIPYCQK 300 (478)
Q Consensus 277 a-----~~~L-G~ay~~~~~~eeAl~~~ek 300 (478)
. .+++ ..+|.++|++++++..|.+
T Consensus 85 iA~~~g~~n~af~~~l~lGdv~~~i~lL~~ 114 (177)
T 3mkq_B 85 IAQTREDFGSMLLNTFYNNSTKERSSIFAE 114 (177)
T ss_dssp HHHHTTCHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHCccHHHHHHHHHHcCCHHHHHHHHHH
Confidence 1 1222 3445567777777766654
No 258
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=83.81 E-value=2.9 Score=35.84 Aligned_cols=36 Identities=17% Similarity=-0.008 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHH
Q 011759 275 AELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQ 310 (478)
Q Consensus 275 Aea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k~rl~ 310 (478)
|..+.+.++-+...++|++|+.+|..|+++|...+.
T Consensus 18 Ai~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~alk 53 (117)
T 2cpt_A 18 AIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVK 53 (117)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHH
Confidence 344445555667789999999999999998766644
No 259
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=83.68 E-value=7.2 Score=39.79 Aligned_cols=58 Identities=17% Similarity=0.174 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHhcC-------CC---------ChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHH
Q 011759 251 TSLSDYQKALTILERMVE-------PD---------SRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSR 308 (478)
Q Consensus 251 eAl~dy~kAL~I~~~llg-------~d---------~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k~r 308 (478)
++..+|+.|+........ .. +-..|.+||..|..+...++|.+|+.+++.|...++..
T Consensus 217 ~~~~~Y~~a~~~l~~~~~~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a 290 (392)
T 1zb1_A 217 ATCNLFQKCHDFMKEIDDDVAIYGEPKWKTTVTCKLHFYKSLSAYYHGLHLEEENRVGEAIAFLDFSMQQLISS 290 (392)
T ss_dssp HHHHHHHHHHHHHHSCCCTTTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 455667777776665421 11 12467889999999999999999999999998765443
No 260
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=83.40 E-value=2.2 Score=38.19 Aligned_cols=60 Identities=10% Similarity=0.155 Sum_probs=46.3
Q ss_pred cChHHHHHHHH--------HHHHHHHHHhcCC-CchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 011759 205 ESDLDLAWKML--------DVARAIAEKHWGD-SMEKVDILSALAEVALEREDIETSLSDYQKALTILE 264 (478)
Q Consensus 205 ~ddle~AwE~L--------e~Ar~I~ek~l~~-~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~ 264 (478)
...|..||.+. ..++.+++..... ....=+|+..||.-+..+++|+.|+.+.+.+|++.+
T Consensus 40 ~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP 108 (144)
T 1y8m_A 40 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHER 108 (144)
T ss_dssp HHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence 36899999765 4555555554432 236789999999999999999999999998888754
No 261
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=82.95 E-value=3.4 Score=40.34 Aligned_cols=72 Identities=26% Similarity=0.267 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHH-HHHcCCCchHHHHHHHHHHH
Q 011759 232 KVDILSALAEVALERED---IETSLSDYQKALTILERMVEPDSRHIAELNFRICL-CLEIGSKPQEAIPYCQKAIS 303 (478)
Q Consensus 232 ~Ad~~~~LGev~le~g~---feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~-ay~~~~~~eeAl~~~ekAL~ 303 (478)
.++.|.-|+++.....+ -+.|...|++|+.|....++|.||.---...|.+. -|+..++.++|+..-++|+.
T Consensus 152 KGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 152 KGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred hccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 46777778877554433 36789999999999999999999874433344433 34457888888877777654
No 262
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=81.33 E-value=5.9 Score=32.05 Aligned_cols=37 Identities=16% Similarity=0.165 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHH
Q 011759 274 IAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQ 310 (478)
Q Consensus 274 iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k~rl~ 310 (478)
-|..+..-++-+...|+|++|+.+|+.||+.|..-+.
T Consensus 15 ~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~alk 51 (86)
T 4a5x_A 15 AAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLK 51 (86)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHh
Confidence 3555667777788999999999999999998776543
No 263
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=80.80 E-value=50 Score=33.26 Aligned_cols=36 Identities=19% Similarity=0.167 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHH
Q 011759 274 IAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRV 309 (478)
Q Consensus 274 iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k~rl 309 (478)
.|.+||..|..+...++|.+||.+++.|+..++.-+
T Consensus 251 ~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a~ 286 (363)
T 3rau_A 251 AAVAHLHMGKQAEEQQKFGERVAYFQSALDKLNEAI 286 (363)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 588999999999999999999999999998766543
No 264
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=80.71 E-value=2.1 Score=45.90 Aligned_cols=48 Identities=23% Similarity=0.366 Sum_probs=35.0
Q ss_pred hHHHHHH--HHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 011759 207 DLDLAWK--MLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKA 259 (478)
Q Consensus 207 dle~AwE--~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kA 259 (478)
.|.+|++ .|+.|+.+.... +.-..|..||+.++..++|+.|+.+|.++
T Consensus 658 ~f~~~l~~~~~~~A~~~~~~~-----~~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 658 KFELALKVGQLTLARDLLTDE-----SAEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHTCHHHHHHHHTTC-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred heehhhhcCCHHHHHHHHHhh-----CcHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 3444444 346666665432 22468999999999999999999999997
No 265
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=79.95 E-value=3.4 Score=40.50 Aligned_cols=71 Identities=18% Similarity=0.294 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhc--CCCChHHHHHHHHHHHHH-HcCCCchHHHHHHHHHHH
Q 011759 233 VDILSALAEVALERED---IETSLSDYQKALTILERMV--EPDSRHIAELNFRICLCL-EIGSKPQEAIPYCQKAIS 303 (478)
Q Consensus 233 Ad~~~~LGev~le~g~---feeAl~dy~kAL~I~~~ll--g~d~r~iAea~~~LG~ay-~~~~~~eeAl~~~ekAL~ 303 (478)
+|.|.-|+++.....+ -+.|...|++|++|.+..+ +|.||.---...|.++-| +.+++.++|+..-++|+.
T Consensus 149 GDYyRYlAE~~~g~erk~~~e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFd 225 (268)
T 3efz_A 149 GDLMRYKAEILKDEEKNQCIKQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQ 225 (268)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred chHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 5666666665443332 4788999999999999989 999987444444554443 468888888887777664
No 266
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=79.02 E-value=14 Score=30.21 Aligned_cols=37 Identities=19% Similarity=0.182 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHH
Q 011759 274 IAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQ 310 (478)
Q Consensus 274 iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k~rl~ 310 (478)
-|..+.+.++-+...++|++|+.+|..||+.+...+.
T Consensus 14 ~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~alk 50 (93)
T 1wfd_A 14 AAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLK 50 (93)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 3455666777788899999999999999998766644
No 267
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.66 E-value=20 Score=30.72 Aligned_cols=78 Identities=14% Similarity=0.044 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCccccccccccccccccchhhhHHHHH
Q 011759 275 AELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQRLLNEVKSLGESATSSAPAELDDGIQQSSSEFQNDKLLTDKEAE 354 (478)
Q Consensus 275 Aea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k~rl~~l~~~l~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~E 354 (478)
|..|.+-|+.+.-.|+.+.|+.+|++.|.-+.+-|.- .. ..+ ...+..-...+.=
T Consensus 22 AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I-----~~-----------~~~---------~~~g~~we~Ar~l 76 (116)
T 2dl1_A 22 AFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISI-----SS-----------KES---------EHTGPGWESARQM 76 (116)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSS-----CC-----------CCT---------TCCCSHHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhccc-----cc-----------cCC---------CCCChhHHHHHHH
Confidence 3444445555555577778888888777544333221 00 000 0112222344555
Q ss_pred HHHHHhhHHHHHHHHHHHHHhhc
Q 011759 355 IETLSGLCGDLEKKLEDLQQVAL 377 (478)
Q Consensus 355 i~elk~ll~dl~~KieDlk~~~~ 377 (478)
+.-++..|..++.||.+|+..+.
T Consensus 77 q~KM~~nL~~v~~RL~~Le~~~~ 99 (116)
T 2dl1_A 77 QQKMKETLQNVRTRLEILEKGLA 99 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Confidence 56677888889999999987644
No 268
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=75.97 E-value=65 Score=31.93 Aligned_cols=87 Identities=9% Similarity=-0.086 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHH--------HHHHHHHHhcCC---CChHHHHHHHHHH
Q 011759 214 MLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQ--------KALTILERMVEP---DSRHIAELNFRIC 282 (478)
Q Consensus 214 ~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~--------kAL~I~~~llg~---d~r~iAea~~~LG 282 (478)
.+..|+.-..+..+......+.|..+|.++++.++|.+|..||- .+..+.-+.+.. ..+.-+..+.-.+
T Consensus 115 fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~~Ra 194 (312)
T 2wpv_A 115 VITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFFSRL 194 (312)
T ss_dssp HHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHHHHHH
Confidence 34455544444434344456889999999999999999999883 233343333322 4455555554444
Q ss_pred -HHHHcCCCchHHHHHHHH
Q 011759 283 -LCLEIGSKPQEAIPYCQK 300 (478)
Q Consensus 283 -~ay~~~~~~eeAl~~~ek 300 (478)
+.|...++...|...|..
T Consensus 195 VL~yL~l~n~~~A~~~~~~ 213 (312)
T 2wpv_A 195 VFNYLFISNISFAHESKDI 213 (312)
T ss_dssp HHHHHHTTBHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHH
Confidence 345567777777666654
No 269
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=75.77 E-value=14 Score=29.57 Aligned_cols=37 Identities=24% Similarity=0.166 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHH
Q 011759 274 IAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQ 310 (478)
Q Consensus 274 iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k~rl~ 310 (478)
-|..+...|+-+...|+|++|+.+|+.||+.+...+.
T Consensus 18 ~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~alk 54 (83)
T 2w2u_A 18 MARKYAINAVKADKEGNAEEAITNYKKAIEVLAQLVS 54 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 3455666777888999999999999999998776654
No 270
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=75.13 E-value=21 Score=36.25 Aligned_cols=99 Identities=14% Similarity=0.028 Sum_probs=70.9
Q ss_pred ChHHHHHHHHHHHHHHHHH----hcCC------CchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHH
Q 011759 206 SDLDLAWKMLDVARAIAEK----HWGD------SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIA 275 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek----~l~~------~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iA 275 (478)
.|.+.|.+.|+....-+.+ .... ......+...++.+|+..++++.|...++++-.+....-+.+.+..+
T Consensus 90 ~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~v~~ 169 (393)
T 4b4t_O 90 KDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRITN 169 (393)
T ss_dssp TCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSSHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccHHHHH
Confidence 4566777777644222211 1110 12356788899999999999999999999999998887666666677
Q ss_pred HHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 276 ELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 276 ea~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
..|+..+.-|...++|..+..++-..+..
T Consensus 170 ~~y~~~~~~~~~~~~~a~~y~~~l~~l~~ 198 (393)
T 4b4t_O 170 SFYSTNSQYFKFKNDFNSFYYTSLLYLST 198 (393)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 77777888888999988776666666553
No 271
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=74.61 E-value=47 Score=34.38 Aligned_cols=77 Identities=16% Similarity=0.088 Sum_probs=51.9
Q ss_pred HHHHHHHHHhcCCCchHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHH
Q 011759 216 DVARAIAEKHWGDSMEKVDILSALAEVALERE-DIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEA 294 (478)
Q Consensus 216 e~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g-~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeA 294 (478)
+.||.||++. ........+|...+.+-...+ +++.|...|+.+++. + ++.+.+-..| ..-+...|+.+.|
T Consensus 303 ~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~----~-~~~~~~~~~y---id~e~~~~~~~~a 373 (493)
T 2uy1_A 303 ELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLK----H-PDSTLLKEEF---FLFLLRIGDEENA 373 (493)
T ss_dssp HHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHH----C-TTCHHHHHHH---HHHHHHHTCHHHH
T ss_pred HHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHH----C-CCCHHHHHHH---HHHHHHcCCHHHH
Confidence 5677888777 322224567777777776666 599999999999884 3 3445443333 3334567888899
Q ss_pred HHHHHHH
Q 011759 295 IPYCQKA 301 (478)
Q Consensus 295 l~~~ekA 301 (478)
...|+++
T Consensus 374 R~l~er~ 380 (493)
T 2uy1_A 374 RALFKRL 380 (493)
T ss_dssp HHHHHHS
T ss_pred HHHHHHH
Confidence 9898886
No 272
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=74.39 E-value=33 Score=35.06 Aligned_cols=49 Identities=4% Similarity=0.054 Sum_probs=24.6
Q ss_pred CCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHH
Q 011759 247 EDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAI 295 (478)
Q Consensus 247 g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl 295 (478)
-+|...|..++.-|.-+.+.+-..|..+-.++..|---+....+.+..+
T Consensus 63 r~~~~rIe~L~~~L~~~s~s~~~~~~y~~~~~~~lk~~~~q~~dndn~~ 111 (390)
T 1deq_A 63 QDFTSRINKLRDSLFNYQKNSKDSNTLTKNIVELMRGDFAKANNNDNTF 111 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhccchHHH
Confidence 4555555555555555555544444444444444444444444444433
No 273
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=73.18 E-value=6.8 Score=31.37 Aligned_cols=36 Identities=25% Similarity=0.263 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHH
Q 011759 275 AELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQ 310 (478)
Q Consensus 275 Aea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k~rl~ 310 (478)
|.-+...|.-+...|+|++|+.+|+.||+.+...+.
T Consensus 11 Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~~lk 46 (83)
T 2v6y_A 11 ARKYAILAVKADKEGKVEDAITYYKKAIEVLSQIIV 46 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 344555667778899999999999999998777654
No 274
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=71.00 E-value=5.3 Score=26.06 Aligned_cols=28 Identities=18% Similarity=0.448 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhhc
Q 011759 350 DKEAEIETLSGLCGDLEKKLEDLQQVAL 377 (478)
Q Consensus 350 ~~~~Ei~elk~ll~dl~~KieDlk~~~~ 377 (478)
.++.++..|..++.+|++|+.-|++.++
T Consensus 3 rlee~~r~l~~ivq~lq~r~drle~tvq 30 (32)
T 2akf_A 3 RLEEDVRNLNAIVQKLQERLDRLEETVQ 30 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5677889999999999999999988653
No 275
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=70.37 E-value=51 Score=34.99 Aligned_cols=21 Identities=24% Similarity=0.309 Sum_probs=11.4
Q ss_pred HHHHHHHHHhcCCHHHHHHHH
Q 011759 236 LSALAEVALEREDIETSLSDY 256 (478)
Q Consensus 236 ~~~LGev~le~g~feeAl~dy 256 (478)
+..++.+....|+|..|...|
T Consensus 726 ~~~~~~~a~~~~~~~~A~~~~ 746 (814)
T 3mkq_A 726 LVTLAKDAETTGKFNLAFNAY 746 (814)
T ss_dssp HHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHcCchHHHHHHH
Confidence 445555555566665555443
No 276
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=69.79 E-value=1.3 Score=38.40 Aligned_cols=69 Identities=13% Similarity=0.169 Sum_probs=39.2
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHH--------------------HHHHHHHcCCCchHHHHHHHH
Q 011759 241 EVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNF--------------------RICLCLEIGSKPQEAIPYCQK 300 (478)
Q Consensus 241 ev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~--------------------~LG~ay~~~~~~eeAl~~~ek 300 (478)
.+.....++..++..|+++++..+.+-.... .++++ .||.=|+....+++|+.+|++
T Consensus 19 ~l~~~~~~l~~~i~e~~~~~e~l~~l~~~~~---~~~lvplg~~~yv~a~i~~~~~V~v~lG~g~~vE~~~~eA~~~l~~ 95 (133)
T 1fxk_C 19 LIQQQMEAVRATISELEILEKTLSDIQGKDG---SETLVPVGAGSFIKAELKDTSEVIMSVGAGVAIKKNFEDAMESIKS 95 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTT---CEEEEEEETTEEEEEECCSTTEEEEEEETTEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCC---CeEEEEcCCCcEEEEEECCCCEEEEEcCCCEEEEeeHHHHHHHHHH
Confidence 3445556678888999999998887653111 12222 244333333345777777766
Q ss_pred HHHHHHHHHHHH
Q 011759 301 AISVCKSRVQRL 312 (478)
Q Consensus 301 AL~I~k~rl~~l 312 (478)
=++.++.++..+
T Consensus 96 r~~~l~~~~~~l 107 (133)
T 1fxk_C 96 QKNELESTLQKM 107 (133)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555544444444
No 277
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=68.79 E-value=13 Score=38.30 Aligned_cols=72 Identities=14% Similarity=-0.034 Sum_probs=56.8
Q ss_pred hHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Q 011759 231 EKVDILSALAEVALERE--DIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 231 ~~Ad~~~~LGev~le~g--~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~ 305 (478)
..--++.+||++---.- ....++..|.+|+...+.+|+.+|- --|..||-.|.+.++|.+|+.++-.|-.++
T Consensus 253 rYPmALgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~Hv---YPYtylgGy~yR~~~~reAl~~WA~Aa~Vi 326 (472)
T 3re2_A 253 TYPMAIANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDHHI---YPYTYLGGYYYRKKKYYEAIASWVDAGYVA 326 (472)
T ss_dssp TCHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCS---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hCchhhcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccCCc---cchhhhhhhhhhcchHHHHHHHHHHHHHHH
Confidence 34456777777644322 2233999999999999999998885 578889999999999999999998887764
No 278
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=68.00 E-value=76 Score=30.14 Aligned_cols=27 Identities=15% Similarity=0.213 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011759 293 EAIPYCQKAISVCKSRVQRLLNEVKSL 319 (478)
Q Consensus 293 eAl~~~ekAL~I~k~rl~~l~~~l~~~ 319 (478)
+-+..+++=|+..+.++..++.++..+
T Consensus 90 kE~~aL~kEie~~~~~i~~lE~eile~ 116 (256)
T 3na7_A 90 RELRSLNIEEDIAKERSNQANREIENL 116 (256)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555566666666666665555443
No 279
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=67.53 E-value=19 Score=37.63 Aligned_cols=84 Identities=8% Similarity=0.014 Sum_probs=60.6
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 285 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 285 (478)
.+++.|+++|+.-+. .+-.|+ ..+|+.|-..|...|++++|+..|++... .-+.|+ ..+|..|=.+|
T Consensus 84 ~~l~~A~~lf~~M~~-----~G~~Pd-~~tyn~lI~~~~~~g~~~~A~~l~~~M~~---~g~~Pd----~~tyn~lI~~~ 150 (501)
T 4g26_A 84 PGLSRGFDIFKQMIV-----DKVVPN-EATFTNGARLAVAKDDPEMAFDMVKQMKA---FGIQPR----LRSYGPALFGF 150 (501)
T ss_dssp HHHHHHHHHHHHHHH-----TTCCCC-HHHHHHHHHHHHHHTCHHHHHHHHHHHHH---TTCCCC----HHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHH-----hCCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHHHHH---cCCCCc----cceehHHHHHH
Confidence 567777776654331 122232 45899999999999999999999987543 223333 35788888899
Q ss_pred HcCCCchHHHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQKAI 302 (478)
Q Consensus 286 ~~~~~~eeAl~~~ekAL 302 (478)
...|++++|...|++.+
T Consensus 151 ~~~g~~~~A~~l~~~M~ 167 (501)
T 4g26_A 151 CRKGDADKAYEVDAHMV 167 (501)
T ss_dssp HHTTCHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHH
Confidence 99999999998887644
No 280
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=64.07 E-value=43 Score=35.02 Aligned_cols=73 Identities=12% Similarity=0.045 Sum_probs=56.4
Q ss_pred hHHHHHHHHHHHHHhcCCH--HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH
Q 011759 231 EKVDILSALAEVALEREDI--ETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCK 306 (478)
Q Consensus 231 ~~Ad~~~~LGev~le~g~f--eeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k 306 (478)
+.--++.+||++---.--. ..++..|.+|+...+.+|..+|- --|-.||-.|.+.++|.+|+.++-.|-.+++
T Consensus 275 rYPmALgnLgDLEe~~pt~gr~~~~~L~~~AI~sa~~~Y~n~Hv---YPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~ 349 (550)
T 3u84_A 275 RYPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHI---YPYMYLAGYHCRNRNVREALQAWADTATVIQ 349 (550)
T ss_dssp TCHHHHHHHHHHHHHSCCTTCCCHHHHHHHHHHHHHHHSTTCCS---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred hCchhhcchhhHhhcCCCCCCCCHHHHHHHHHHHHHHHhccCCc---cceeecchhhhhcchHHHHHHHHHHHHHHHH
Confidence 3445667777754322111 24899999999999999998885 5788899999999999999999988877643
No 281
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=63.93 E-value=10 Score=30.28 Aligned_cols=35 Identities=11% Similarity=0.155 Sum_probs=30.3
Q ss_pred HHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHH
Q 011759 278 NFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQRL 312 (478)
Q Consensus 278 ~~~LG~ay~~~~~~eeAl~~~ekAL~I~k~rl~~l 312 (478)
+.++|.=|...|+|+-|+.||+.++.-+.+.|..+
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~~~ 49 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSV 49 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhc
Confidence 45778888899999999999999999888887765
No 282
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=62.34 E-value=54 Score=34.22 Aligned_cols=84 Identities=11% Similarity=0.011 Sum_probs=61.6
Q ss_pred HHHHHHHHhcCCCchHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHH
Q 011759 217 VARAIAEKHWGDSMEKVDILSALAEVALERE--DIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEA 294 (478)
Q Consensus 217 ~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g--~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeA 294 (478)
+-..+|+.- +-...--++.+||++---.. ..+.++..|.+|+.+.+..|...|- -.|-.||-.|.+.++|.+|
T Consensus 248 LLWlLyd~G--hl~~YPmALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~~hv---YPYtYlgG~~~R~~~~~eA 322 (489)
T 4gq4_A 248 LLWLLYDLG--HLERYPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHI---YPYMYLAGYHCRNRNVREA 322 (489)
T ss_dssp HHHHHHHHT--TTTTCHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCS---HHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHhcc--chhhcchhhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhcccCcc---cceeecchHHHHhhhHHHH
Confidence 334455443 22234556777777653222 2345889999999999999988883 6788899999999999999
Q ss_pred HHHHHHHHHHH
Q 011759 295 IPYCQKAISVC 305 (478)
Q Consensus 295 l~~~ekAL~I~ 305 (478)
+.++-.|-.++
T Consensus 323 l~~wa~aa~Vi 333 (489)
T 4gq4_A 323 LQAWADTATVI 333 (489)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHhhhhhhhh
Confidence 99999987653
No 283
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=62.15 E-value=17 Score=28.64 Aligned_cols=32 Identities=22% Similarity=0.456 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 011759 64 EFADELMEKGTNALKESDYGEAAECFSRALEI 95 (478)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei 95 (478)
...-.-+.+|-.++..|++++|+.+|.+|+.+
T Consensus 15 ~~Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~V 46 (73)
T 3ax2_A 15 KFFLEEIQLGEELLAQGDYEKGVDHLTNAIAV 46 (73)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 44666788999999999999999999999986
No 284
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=60.53 E-value=16 Score=30.34 Aligned_cols=36 Identities=19% Similarity=0.368 Sum_probs=30.9
Q ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 011759 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIR 96 (478)
Q Consensus 61 ~~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~ 96 (478)
......-.-+.+|-.++..|+++.|+.+|.+|+.++
T Consensus 15 ~~e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc 50 (95)
T 1om2_A 15 AVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVC 50 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 344557777899999999999999999999999974
No 285
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=59.89 E-value=1.9 Score=42.12 Aligned_cols=61 Identities=11% Similarity=0.159 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh-CCCChhHHHHHHHHHHHHHhh
Q 011759 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-GELALECVNAYYQYGRALLYK 121 (478)
Q Consensus 61 ~~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~-Ge~~pe~A~~y~~YG~ALl~~ 121 (478)
..+..|..|+.+|..+-..|+|.+|..+|.+|++++.... ++..+..-..+-..-.-|+..
T Consensus 18 p~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~alk~e~d~~~k~~lr~Ki~eYl~R 79 (257)
T 2ymb_A 18 PQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDR 79 (257)
T ss_dssp --------------------------------------------------------------
T ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 4567799999999999999999999999999999876655 455666555555554445444
No 286
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=58.67 E-value=61 Score=30.32 Aligned_cols=86 Identities=7% Similarity=-0.034 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHhcC--CCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCC
Q 011759 213 KMLDVARAIAEKHWG--DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSK 290 (478)
Q Consensus 213 E~Le~Ar~I~ek~l~--~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~ 290 (478)
.+|+++..-|..... +.++...++...++.+ ..++..++...|.-. ..+-.| ..+|.-|-..+..|+..|+
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L---~~~~IG---~~~AlfYe~wA~~lE~~g~ 130 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLF-LSNNFHESENTFKYM---FNKGIG---TKLSLFYEEFSKLLENAQF 130 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHH---HHHTSS---TTBHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhh-cccccCCHHHHHHHH---HHCCCc---HHHHHHHHHHHHHHHHcCC
Confidence 678888888766544 3578899999999876 233455666666532 222233 3457889999999999999
Q ss_pred chHHHHHHHHHHHHH
Q 011759 291 PQEAIPYCQKAISVC 305 (478)
Q Consensus 291 ~eeAl~~~ekAL~I~ 305 (478)
|.+|...|+++|.-.
T Consensus 131 ~~~A~~Vy~~GI~~~ 145 (202)
T 3esl_A 131 FLEAKVLLELGAENN 145 (202)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcC
Confidence 999999999998754
No 287
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=58.31 E-value=21 Score=28.80 Aligned_cols=32 Identities=38% Similarity=0.367 Sum_probs=29.3
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCh
Q 011759 349 TDKEAEIETLSGLCGDLEKKLEDLQQVALFPK 380 (478)
Q Consensus 349 ~~~~~Ei~elk~ll~dl~~KieDlk~~~~~p~ 380 (478)
+..++|++.|..-|..|+.+|..|...|.+|.
T Consensus 18 ykeqrEle~le~~Ie~LE~~i~~le~~ladp~ 49 (89)
T 2lw1_A 18 YKLQRELEQLPQLLEDLEAKLEALQTQVADAS 49 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 57789999999999999999999999998875
No 288
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=54.41 E-value=13 Score=29.60 Aligned_cols=39 Identities=10% Similarity=0.043 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhC
Q 011759 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYG 101 (478)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~G 101 (478)
+...-+-+.+|+.+--.|+|+.|+-+|+.+++...++.-
T Consensus 9 ~~~i~e~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~ 47 (78)
T 2rpa_A 9 LQMIVENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLY 47 (78)
T ss_dssp SHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 445667778999999999999999999999998766553
No 289
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=54.17 E-value=17 Score=32.98 Aligned_cols=88 Identities=14% Similarity=0.133 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHhcC--CCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC-ChHHHHHHHHHHHHHHcCC
Q 011759 213 KMLDVARAIAEKHWG--DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPD-SRHIAELNFRICLCLEIGS 289 (478)
Q Consensus 213 E~Le~Ar~I~ek~l~--~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d-~r~iAea~~~LG~ay~~~~ 289 (478)
.+|+.+...|..... +.++...++..+++.. ++ +...| ..++... -..+|.-|-..+..|+..|
T Consensus 44 ~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~---~~---p~~if-------~~L~~~~IG~~~AlfY~~wA~~lE~~~ 110 (164)
T 2wvi_A 44 TLLERAVEALQGEKRYYSDPRFLNLWLKLGRLC---NE---PLDMY-------SYLHNQGIGVSLAQFYISWAEEYEARE 110 (164)
T ss_dssp HHHHHHHHHTTTCGGGTTCHHHHHHHHHHHHHC---SC---HHHHH-------HHHHHTTSSTTBHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhhhhhhccCHHHHHHHHHHHHhc---CC---HHHHH-------HHHHHCCcchhhHHHHHHHHHHHHHcC
Confidence 468888887765543 3578889999888874 22 33333 3332211 2345888999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHH
Q 011759 290 KPQEAIPYCQKAISVCKSRVQRLL 313 (478)
Q Consensus 290 ~~eeAl~~~ekAL~I~k~rl~~l~ 313 (478)
+|.+|...|+++|.-.-.=+..|+
T Consensus 111 ~~~~A~~Iy~~Gi~~~A~P~~~L~ 134 (164)
T 2wvi_A 111 NFRKADAIFQEGIQQKAEPLERLQ 134 (164)
T ss_dssp CHHHHHHHHHHHHHTTCBSHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCcHHHHH
Confidence 999999999999875433334443
No 290
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=53.79 E-value=58 Score=28.67 Aligned_cols=42 Identities=19% Similarity=0.222 Sum_probs=36.0
Q ss_pred hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChH
Q 011759 231 EKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRH 273 (478)
Q Consensus 231 ~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~ 273 (478)
..|..+...|.+|...|++++|--.|-+.+.|....++. ||.
T Consensus 38 rta~~llr~A~~y~~egd~e~AYily~R~~~L~~e~Ipk-Hpd 79 (146)
T 2xze_A 38 RSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLPK-HRD 79 (146)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTGGG-STT
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHccc-Ccc
Confidence 467888889999999999999999999999999876653 443
No 291
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=53.52 E-value=24 Score=31.97 Aligned_cols=51 Identities=22% Similarity=0.156 Sum_probs=41.2
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTIL 263 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~ 263 (478)
.|.+.|.++|..|+.+ +...|.+|...|..-+.+|++..|..-+.+|+-+.
T Consensus 74 ~D~d~aR~vy~~a~~~-------hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~ 124 (161)
T 4h7y_A 74 QEPDDARDYFQMARAN-------CKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERG 124 (161)
T ss_dssp HCGGGCHHHHHHHHHH-------CTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHH-------hHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccC
Confidence 3455678888888776 22359999999999999999999999999888743
No 292
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=52.87 E-value=11 Score=42.15 Aligned_cols=55 Identities=22% Similarity=0.276 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCccC
Q 011759 68 ELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLV 130 (478)
Q Consensus 68 ~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~esdvLg 130 (478)
-|..++.-++..|+|+-|..+-.+|+.+ .|.-..+++.+..+|..+++.+++.|-
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~--------aPseF~tW~~La~vYi~l~d~e~ALLt 393 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTEL--------ALDSFESWYNLARCHIKKEEYEKALFA 393 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSSCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhc--------CchhhHHHHHHHHHHHHhccHHHHHHH
Confidence 4666777788899999999999999999 899999999999999999999987553
No 293
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=52.29 E-value=17 Score=32.61 Aligned_cols=90 Identities=13% Similarity=0.002 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHhcC--CCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC-ChHHHHHHHHHHHHHHcC
Q 011759 212 WKMLDVARAIAEKHWG--DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPD-SRHIAELNFRICLCLEIG 288 (478)
Q Consensus 212 wE~Le~Ar~I~ek~l~--~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d-~r~iAea~~~LG~ay~~~ 288 (478)
..+|+++...|..... +.++...++...++.. .+ ...|..-++... -..+|.-|-..+..|+..
T Consensus 48 ~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~------~d-------p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~ 114 (152)
T 4a1g_A 48 ITLLEHLMKEFLDKKKYHNDPRFISYCLKFAEYN------SD-------LHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQ 114 (152)
T ss_dssp HHHHHHHHHHHTTCGGGTTCHHHHHHHHHHHTTB------SC-------HHHHHHHHHTTTTTTTBHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcccccccCCHHHHHHHHHHHHhc------CC-------HHHHHHHHHHCCCcHHHHHHHHHHHHHHHHc
Confidence 3678888888865433 3577888888888763 12 334444444332 345688899999999999
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHH
Q 011759 289 SKPQEAIPYCQKAISVCKSRVQRLLN 314 (478)
Q Consensus 289 ~~~eeAl~~~ekAL~I~k~rl~~l~~ 314 (478)
|++.+|...|+++|.-.-.=+..|+.
T Consensus 115 g~~~~A~~Vy~~Gi~~~A~P~~rL~~ 140 (152)
T 4a1g_A 115 GELQHASAVLQRGIQNQAEPREFLQQ 140 (152)
T ss_dssp TCHHHHHHHHHHHHHTTCBSHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCccHHHHHH
Confidence 99999999999998754333444443
No 294
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=51.18 E-value=18 Score=38.29 Aligned_cols=50 Identities=16% Similarity=0.111 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhh
Q 011759 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKA 122 (478)
Q Consensus 65 ~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a 122 (478)
--.-|+.+|..+.....+..|..+|.+|+.+ .|.++..|+.+|......+
T Consensus 151 ~hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~--------~P~~G~~~nqLavla~~~~ 200 (497)
T 1ya0_A 151 CQHCLVHLGDIARYRNQTSQAESYYRHAAQL--------VPSNGQPYNQLAILASSKG 200 (497)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTBSHHHHHHHHHHHHTT
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHHHh--------CCCCCchHHHHHHHHhccc
Confidence 3567899999999999999999999999999 7999999999998777643
No 295
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=48.58 E-value=19 Score=37.15 Aligned_cols=56 Identities=7% Similarity=0.040 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 249 IETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 249 feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
|++-+.+++.|+.++.......+..-.-++.-|+.+|.+.++|++|+.+.+++|..
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 45566667777655432211223345567778999999999999999999888864
No 296
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=48.46 E-value=1.3e+02 Score=30.12 Aligned_cols=48 Identities=6% Similarity=-0.177 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhh
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYK 121 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ 121 (478)
...+..+...++..|+|.+|+..+.+++.+ ||-.=.+|..+=++|+..
T Consensus 171 ~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~--------~P~~E~~~~~lm~al~~~ 218 (388)
T 2ff4_A 171 VLAHTAKAEAEIACGRASAVIAELEALTFE--------HPYREPLWTQLITAYYLS 218 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHc
Confidence 455566778889999999999999999887 777777888887788754
No 297
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=48.04 E-value=30 Score=24.44 Aligned_cols=31 Identities=23% Similarity=0.271 Sum_probs=25.8
Q ss_pred hhHHHHHHHHHHhhHHHHHHHHHHHHHhhcC
Q 011759 348 LTDKEAEIETLSGLCGDLEKKLEDLQQVALF 378 (478)
Q Consensus 348 ~~~~~~Ei~elk~ll~dl~~KieDlk~~~~~ 378 (478)
+..+.+||.-.+.=|.+++.|+.+|++...-
T Consensus 11 I~kVdrEI~Kte~kI~~lqkKlkeLee~a~k 41 (42)
T 2l5g_B 11 MDRVDREITMVEQQISKLKKKQQQLEEEAAK 41 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 3567789999999999999999999886543
No 298
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=46.23 E-value=32 Score=36.49 Aligned_cols=43 Identities=12% Similarity=0.189 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCc
Q 011759 249 IETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKP 291 (478)
Q Consensus 249 feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~ 291 (478)
-..|+.+|++|+..++++-..+++.....|.+++.-|+..|+|
T Consensus 448 A~kAi~~Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak~yE~aGDy 490 (526)
T 2wb7_A 448 AQGAIDEYKAAINDLQKAAQQDDYQMFLNYLNAAKKHEMAGDY 490 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHhhhhhhccHH
Confidence 3689999999999999999999999999999999999888875
No 299
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=45.94 E-value=1.5e+02 Score=27.54 Aligned_cols=72 Identities=11% Similarity=0.098 Sum_probs=52.0
Q ss_pred hHHHHHHHHHHHHHhcCCHHHHHHHHHHHH------------HHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHH
Q 011759 231 EKVDILSALAEVALEREDIETSLSDYQKAL------------TILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYC 298 (478)
Q Consensus 231 ~~Ad~~~~LGev~le~g~feeAl~dy~kAL------------~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ 298 (478)
+.+-+..--..++....+|..|+..+++-| +|+.-++.+.+.. --+.-+|..+...|..++||.||
T Consensus 60 NT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkE--fFy~l~a~lltq~g~r~EaI~y~ 137 (242)
T 3kae_A 60 NTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEE--FFESLLGDLCTLSGYREEGIGHY 137 (242)
T ss_dssp CBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHH--HHHHHHHHHHHHTTCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHH--HHHHHHHHHHHHhcCHHHhhhHh
Confidence 344444455667888899999999999888 2223334444432 33455899999999999999999
Q ss_pred HHHHHH
Q 011759 299 QKAISV 304 (478)
Q Consensus 299 ekAL~I 304 (478)
.++..+
T Consensus 138 ~~Sf~~ 143 (242)
T 3kae_A 138 VRSFGK 143 (242)
T ss_dssp HHHHHH
T ss_pred hhhcCC
Confidence 998765
No 300
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=45.60 E-value=18 Score=34.42 Aligned_cols=80 Identities=10% Similarity=0.006 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHhcC--CCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC-ChHHHHHHHHHHHHHHcCC
Q 011759 213 KMLDVARAIAEKHWG--DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPD-SRHIAELNFRICLCLEIGS 289 (478)
Q Consensus 213 E~Le~Ar~I~ek~l~--~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d-~r~iAea~~~LG~ay~~~~ 289 (478)
.+|+++..-|..... +.++...++..+++.. +++...| .-++... -..+|.-|-..+..|+..|
T Consensus 98 ~lLErc~~~F~~~~rYknD~RyLklWl~Ya~~~------~~p~~if-------~~L~~~~IG~~~AlfYe~wA~~lE~~g 164 (223)
T 4aez_C 98 TLLERCTREFVRNPLYKDDVRYLRIWMQYVNYI------DEPVELF-------SFLAHHHIGQESSIFYEEYANYFESRG 164 (223)
T ss_dssp HHHHHHHHHTTTCGGGTTCHHHHHHHHHHHTTC------SCHHHHH-------HHHHHTTCSTTBHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHcc------CCHHHHH-------HHHHHCCcchhHHHHHHHHHHHHHHcC
Confidence 578888888766544 3478888998888742 2333333 3332221 2345888999999999999
Q ss_pred CchHHHHHHHHHHHHH
Q 011759 290 KPQEAIPYCQKAISVC 305 (478)
Q Consensus 290 ~~eeAl~~~ekAL~I~ 305 (478)
+|.+|...|+++|.-.
T Consensus 165 ~~~~A~~Vy~~Gi~~~ 180 (223)
T 4aez_C 165 LFQKADEVYQKGKRMK 180 (223)
T ss_dssp CHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcC
Confidence 9999999999998754
No 301
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=45.14 E-value=2.1e+02 Score=28.96 Aligned_cols=26 Identities=27% Similarity=0.395 Sum_probs=18.4
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHh
Q 011759 350 DKEAEIETLSGLCGDLEKKLEDLQQV 375 (478)
Q Consensus 350 ~~~~Ei~elk~ll~dl~~KieDlk~~ 375 (478)
.-++.|++|+.-|..+.++|++++..
T Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (471)
T 3mq9_A 440 QGQKKVEELEGEITTLNHKLQDASAE 465 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567777777777777777777653
No 302
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=44.92 E-value=19 Score=37.18 Aligned_cols=56 Identities=13% Similarity=0.051 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 249 IETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 249 feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
|++-+.+++.|+.++.......+..-.-++.-|+.+|.+.++|++|+.+.++.|..
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 34556666666655432222223445567778999999999999999999988864
No 303
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.74 E-value=72 Score=27.31 Aligned_cols=76 Identities=18% Similarity=0.162 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHH---HHHHHHHH
Q 011759 232 KVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQK---AISVCKSR 308 (478)
Q Consensus 232 ~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ek---AL~I~k~r 308 (478)
.|-.|.+-|.-.-+.|+-+.|+.+|++.+.-+.+-+.-.... .+ .....|++|..+-+| -|...+.|
T Consensus 21 ~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~~~~-~~---------~~g~~we~Ar~lq~KM~~nL~~v~~R 90 (116)
T 2dl1_A 21 KAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKE-SE---------HTGPGWESARQMQQKMKETLQNVRTR 90 (116)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCCC-TT---------CCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhccccccC-CC---------CCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 344666667777778999999999998888777654321100 00 112346677666555 44445566
Q ss_pred HHHHHHHHH
Q 011759 309 VQRLLNEVK 317 (478)
Q Consensus 309 l~~l~~~l~ 317 (478)
|.-|+....
T Consensus 91 L~~Le~~~~ 99 (116)
T 2dl1_A 91 LEILEKGLA 99 (116)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHhcCC
Confidence 666655443
No 304
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=43.29 E-value=26 Score=29.01 Aligned_cols=29 Identities=21% Similarity=0.267 Sum_probs=25.5
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 011759 236 LSALAEVALEREDIETSLSDYQKALTILE 264 (478)
Q Consensus 236 ~~~LGev~le~g~feeAl~dy~kAL~I~~ 264 (478)
...||+.++..|+++.|+.||-+||.++.
T Consensus 23 eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~ 51 (95)
T 1om2_A 23 EIQLGEELLAQGDYEKGVDHLTNAIAVCG 51 (95)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHcC
Confidence 35799999999999999999999988774
No 305
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=43.06 E-value=63 Score=33.41 Aligned_cols=44 Identities=7% Similarity=-0.000 Sum_probs=34.4
Q ss_pred HHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 011759 219 RAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTI 262 (478)
Q Consensus 219 r~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I 262 (478)
+.+|++.+...+....++...+......|+++.|...|++|+..
T Consensus 199 ~~~ye~al~~~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~ 242 (493)
T 2uy1_A 199 HFIHNYILDSFYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM 242 (493)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC
Confidence 34555544322344788999999999999999999999999987
No 306
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=42.86 E-value=2.7e+02 Score=27.88 Aligned_cols=58 Identities=17% Similarity=0.038 Sum_probs=44.5
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 011759 206 SDLDLAWKMLDVARAIAEKHWGDS-MEKVDILSALAEVALEREDIETSLSDYQKALTIL 263 (478)
Q Consensus 206 ddle~AwE~Le~Ar~I~ek~l~~~-~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~ 263 (478)
+|+..|..+++.+..++....+.. .-.+..|...+..|...++|..+-.++-..|...
T Consensus 141 ~d~~~a~~~l~~~~~~l~~~~~~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~~ 199 (393)
T 4b4t_O 141 NDLVKARDLLDDLEKTLDKKDSIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLSTL 199 (393)
T ss_dssp SCHHHHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhhccCCccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhc
Confidence 567888899999998888765533 3568888899999999999988766665555543
No 307
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=41.72 E-value=65 Score=27.61 Aligned_cols=28 Identities=29% Similarity=0.359 Sum_probs=22.4
Q ss_pred hhHHHHHHHHHHhhHHHHHHHHHHHHHh
Q 011759 348 LTDKEAEIETLSGLCGDLEKKLEDLQQV 375 (478)
Q Consensus 348 ~~~~~~Ei~elk~ll~dl~~KieDlk~~ 375 (478)
+.+++.||++|+.-|.|...+++.|+.-
T Consensus 73 vqeLqgEI~~Lnq~Lq~a~ae~erlr~~ 100 (121)
T 3mq7_A 73 VEELEGEITTLNHKLQDASAEVERLRRE 100 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4577888888888888888888888763
No 308
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=41.66 E-value=1.1e+02 Score=35.71 Aligned_cols=64 Identities=8% Similarity=-0.016 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCc-hHHHHHHHHHHH
Q 011759 233 VDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKP-QEAIPYCQKAIS 303 (478)
Q Consensus 233 Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~-eeAl~~~ekAL~ 303 (478)
..+|+.|=.-|+..|++++|+..|++.. ..-+.|+. .+|.-|=.+|.+.|+. ++|...|++...
T Consensus 165 vvTYNtLI~Glck~G~~~eA~~Lf~eM~---~~G~~PDv----vTYntLI~glcK~G~~~e~A~~Ll~EM~~ 229 (1134)
T 3spa_A 165 LDMYNAVMLGWARQGAFKELVYVLFMVK---DAGLTPDL----LSYAAALQCMGRQDQDAGTIERCLEQMSQ 229 (1134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHH---HTTCCCCH----HHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHhCCCHHHHHHHHHHHH---HcCCCCcH----HHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 4699999999999999999999998653 33343443 5666666688888875 678888877553
No 309
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=40.37 E-value=37 Score=29.92 Aligned_cols=46 Identities=7% Similarity=0.100 Sum_probs=39.1
Q ss_pred hhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChh
Q 011759 60 EKTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALE 106 (478)
Q Consensus 60 ~~~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe 106 (478)
-.-+..|..|+..+..++..||++.|--+|-+.+.|....... ||+
T Consensus 34 ~~ylrta~~llr~A~~y~~egd~e~AYily~R~~~L~~e~Ipk-Hpd 79 (146)
T 2xze_A 34 RRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLPK-HRD 79 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTGGG-STT
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHccc-Ccc
Confidence 3456789999999999999999999999999999998766543 665
No 310
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=40.02 E-value=22 Score=36.83 Aligned_cols=55 Identities=16% Similarity=0.025 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Q 011759 249 IETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (478)
Q Consensus 249 feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~ 303 (478)
|+.-+.+++.|+.++.......+..-.-++.-|+.+|.+.++|++|+.+.++.|.
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 230 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIK 230 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 3445555665554432211112334456777899999999999999998888775
No 311
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=39.44 E-value=42 Score=30.70 Aligned_cols=54 Identities=17% Similarity=0.091 Sum_probs=40.6
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHH
Q 011759 242 VALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSR 308 (478)
Q Consensus 242 v~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k~r 308 (478)
+.++.|+|+.|.+..+ .+ ++ -..|.+||......|+++-|..+|+++-.+-+..
T Consensus 14 LAL~lg~l~~A~e~a~-------~l---~~---~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~ 67 (177)
T 3mkq_B 14 LALEYGNLDAALDEAK-------KL---ND---SITWERLIQEALAQGNASLAEMIYQTQHSFDKLS 67 (177)
T ss_dssp HHHHTTCHHHHHHHHH-------HH---CC---HHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHH
T ss_pred HHHhcCCHHHHHHHHH-------Hh---CC---HHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHH
Confidence 3467788877766543 22 12 3579999999999999999999999987765543
No 312
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=39.29 E-value=95 Score=26.25 Aligned_cols=23 Identities=17% Similarity=0.255 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 011759 297 YCQKAISVCKSRVQRLLNEVKSL 319 (478)
Q Consensus 297 ~~ekAL~I~k~rl~~l~~~l~~~ 319 (478)
-+..|+++++.|+..|+..++.+
T Consensus 85 ~~~eA~~~l~~r~~~l~~~~~~l 107 (133)
T 1fxk_C 85 NFEDAMESIKSQKNELESTLQKM 107 (133)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eHHHHHHHHHHHHHHHHHHHHHH
Confidence 37889999999988887766543
No 313
>3iqc_A FLIS, flagellar protein; chaperone, flagellum; 2.70A {Helicobacter pylori} SCOP: a.24.19.0 PDB: 3k1i_A
Probab=38.01 E-value=1.4e+02 Score=25.68 Aligned_cols=45 Identities=13% Similarity=0.085 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhH
Q 011759 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALEC 107 (478)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~ 107 (478)
.+.+...+.+++.++..|||+++.....+|..|..+.-.-..++.
T Consensus 33 ydgal~~l~~A~~ai~~~d~~~k~~~i~KA~~Ii~~L~~sLd~e~ 77 (131)
T 3iqc_A 33 YEGILRFSSQAKRCIENEDIEKKIYYINRVTDIFTELLNILDYEK 77 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTBCHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 456888899999999999999999999999999988766655543
No 314
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=37.85 E-value=23 Score=27.93 Aligned_cols=28 Identities=21% Similarity=0.286 Sum_probs=24.2
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 011759 236 LSALAEVALEREDIETSLSDYQKALTIL 263 (478)
Q Consensus 236 ~~~LGev~le~g~feeAl~dy~kAL~I~ 263 (478)
...+|+-++..|++++|+.+|-+||.++
T Consensus 20 eV~~GE~L~~~g~~~~~~~hf~nAl~Vc 47 (73)
T 3ax2_A 20 EIQLGEELLAQGDYEKGVDHLTNAIAVC 47 (73)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 3579999999999999999998888754
No 315
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=36.91 E-value=61 Score=37.73 Aligned_cols=68 Identities=7% Similarity=-0.097 Sum_probs=55.6
Q ss_pred hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHH
Q 011759 231 EKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 302 (478)
Q Consensus 231 ~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL 302 (478)
..-.+|+.|=+.++..|+.++|...|...-.+..+-+.++ ..+|.-|=..|+..|++++|+..|++-.
T Consensus 125 ~~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~Pd----vvTYNtLI~Glck~G~~~eA~~Lf~eM~ 192 (1134)
T 3spa_A 125 GQQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLT----LDMYNAVMLGWARQGAFKELVYVLFMVK 192 (1134)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCC----HHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCC----HhHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 4567899999999999999999999988766655444333 3688889999999999999999987653
No 316
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=36.71 E-value=37 Score=35.15 Aligned_cols=55 Identities=15% Similarity=0.011 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHhcC-----CCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 250 ETSLSDYQKALTILERMVE-----PDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 250 eeAl~dy~kAL~I~~~llg-----~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
++-+.+++.|+.++..... ..+..-.-++--|+.+|.+.++|++|+.+.+++|..
T Consensus 161 ~~I~~DL~~A~~~L~~~~~~~~~~~gr~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 161 QQIFDDLNLAQDYLTNYVRKGDGQKFKPNTDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHHTTTCCCCSGGGTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhcccccCCccccCcccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 3444555556555422111 112334567778999999999999999999988853
No 317
>4fm3_A Uncharacterized hypothetical protein; PF14346 family protein, DUF4398, structural genomics, joint for structural genomics, JCSG; HET: PG4; 2.47A {Pseudomonas aeruginosa}
Probab=36.32 E-value=1e+02 Score=25.65 Aligned_cols=32 Identities=16% Similarity=0.052 Sum_probs=26.7
Q ss_pred chHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 011759 230 MEKVDILSALAEVALEREDIETSLSDYQKALT 261 (478)
Q Consensus 230 ~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~ 261 (478)
+..|.-.+.-+...+..++|..|..+.++|.-
T Consensus 31 l~~A~dKl~~A~~Am~~~~y~~Ar~lAEqAe~ 62 (98)
T 4fm3_A 31 LKLAQDKYAAAQIAMTAESYKKARLLAEQAEL 62 (98)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 55677888888999999999999988887743
No 318
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=36.17 E-value=57 Score=37.66 Aligned_cols=70 Identities=11% Similarity=0.090 Sum_probs=50.3
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHH-------------HHhcC--CCChHHHHHHHHHHHHHHcCCCchHHHHHHHH
Q 011759 236 LSALAEVALEREDIETSLSDYQKALTIL-------------ERMVE--PDSRHIAELNFRICLCLEIGSKPQEAIPYCQK 300 (478)
Q Consensus 236 ~~~LGev~le~g~feeAl~dy~kAL~I~-------------~~llg--~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ek 300 (478)
.+.+|.+++..|+|++|..+|++|-.-. ..+.+ .....++.=|+.+...++..+.++.++..-+.
T Consensus 845 ~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~l 924 (1139)
T 4fhn_B 845 VYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLL 924 (1139)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 4789999999999999999998872110 00000 01122344577788899999999999999999
Q ss_pred HHHHH
Q 011759 301 AISVC 305 (478)
Q Consensus 301 AL~I~ 305 (478)
||+..
T Consensus 925 Ai~~~ 929 (1139)
T 4fhn_B 925 ADASK 929 (1139)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 88754
No 319
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=35.92 E-value=1.8e+02 Score=30.56 Aligned_cols=19 Identities=16% Similarity=0.230 Sum_probs=8.1
Q ss_pred HHHHHHhhHHHHHHHHHHH
Q 011759 354 EIETLSGLCGDLEKKLEDL 372 (478)
Q Consensus 354 Ei~elk~ll~dl~~KieDl 372 (478)
.|.-|+..|.++..||.-|
T Consensus 133 ~IrvLq~~l~~q~skIQRL 151 (491)
T 1m1j_A 133 RIKALQNSIQEQVVEMKRL 151 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444433
No 320
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=34.56 E-value=3.1e+02 Score=27.54 Aligned_cols=91 Identities=20% Similarity=0.233 Sum_probs=54.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCccccccccccccccccchhhhHHHHHHHHHHhhHHHHHHHHHH
Q 011759 292 QEAIPYCQKAISVCKSRVQRLLNEVKSLGESATSSAPAELDDGIQQSSSEFQNDKLLTDKEAEIETLSGLCGDLEKKLED 371 (478)
Q Consensus 292 eeAl~~~ekAL~I~k~rl~~l~~~l~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~Ei~elk~ll~dl~~KieD 371 (478)
..-..+||.-+.=-+.+++.|+..|..+.+.++-.+.. .+ .+ ...+. .-....+++-|+..|.+++.-|.|
T Consensus 239 ~~~~~~~~~i~~~~~~h~~~l~~~~~~~g~~~~~~~~~--~~---~~-a~~~~---~~~~~~~~~~l~~al~~~~~gi~~ 309 (365)
T 3fse_A 239 VEAKALFQEMITNKQRHIEYLETYLTRLGEKPSLSANI--AN---QY-AKVKT---ALTGSDDIYQIRSALGDIQTGIGD 309 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGSCC------------------------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCcCcch--hH---HH-HHHHH---HhcCCChHHHHHHHhcchhhhHHH
Confidence 34556788888888889999999999988754322211 00 00 00011 111245777899999999999998
Q ss_pred HHHh---hcCChhH--HHHHHHhhh
Q 011759 372 LQQV---ALFPKSI--LSEILGMAS 391 (478)
Q Consensus 372 lk~~---~~~p~~~--~~e~~~~~~ 391 (478)
..++ ..+|.+. +.+|+..++
T Consensus 310 ~~~l~~~~~dp~~~~i~~~i~~~l~ 334 (365)
T 3fse_A 310 IGNLCAMYTDPIATAIFKEIYKDLV 334 (365)
T ss_dssp HHHHTTTCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 8764 4566643 455544443
No 321
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=34.25 E-value=3.7e+02 Score=26.86 Aligned_cols=86 Identities=10% Similarity=0.025 Sum_probs=49.5
Q ss_pred HHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHH--------HHHHHHHHhcCCCChHHHHHHHHHH-HHH
Q 011759 215 LDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQ--------KALTILERMVEPDSRHIAELNFRIC-LCL 285 (478)
Q Consensus 215 Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~--------kAL~I~~~llg~d~r~iAea~~~LG-~ay 285 (478)
+..|+.--.+.......-.+.|..+|.++++.++|.+|..+|- .+.++.-+.+....+.-+..+.-.+ +.|
T Consensus 118 i~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ilg~~~s~~~~a~mL~ew~~~~~~~e~dlfiaRaVL~y 197 (336)
T 3lpz_A 118 VKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHLVLGTKESPEVLARMEYEWYKQDESHTAPLYCARAVLPY 197 (336)
T ss_dssp HHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHTTSCTTHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHhcCCchHHHHHHHHHHHHHhcCCccHHHHHHHHHHHH
Confidence 3444443344333333456789999999999999999998872 2234444443333344334433332 344
Q ss_pred HcCCCchHHHHHHHH
Q 011759 286 EIGSKPQEAIPYCQK 300 (478)
Q Consensus 286 ~~~~~~eeAl~~~ek 300 (478)
...++...|...|..
T Consensus 198 L~l~n~~~A~~~~~~ 212 (336)
T 3lpz_A 198 LLVANVRAANTAYRI 212 (336)
T ss_dssp HHTTCHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHH
Confidence 566666666555544
No 322
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=33.36 E-value=50 Score=34.40 Aligned_cols=55 Identities=13% Similarity=0.094 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHhcCC---CChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 011759 250 ETSLSDYQKALTILERMVEP---DSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 304 (478)
Q Consensus 250 eeAl~dy~kAL~I~~~llg~---d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I 304 (478)
++-+.+++.|+.++...++. .+..-.-++.-|+.+|.+.++|++|+.+.+++|..
T Consensus 175 ~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 175 AQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 44556666666654332221 12334567778999999999999999999888864
No 323
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=33.17 E-value=9 Score=39.50 Aligned_cols=50 Identities=18% Similarity=0.177 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh-CC-CChhHHHHH
Q 011759 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-GE-LALECVNAY 111 (478)
Q Consensus 62 ~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~-Ge-~~pe~A~~y 111 (478)
.+..|..|+.+|..+-..|+|.+|+.+|.+|++++.... .+ .++..-..|
T Consensus 7 ~~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~l~~~~k~e~~~~~~k~~i 58 (444)
T 2zan_A 7 NLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSI 58 (444)
T ss_dssp ----------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhhccChHHHHHH
Confidence 456789999999999999999999999999999876543 22 444444433
No 324
>4abx_A DNA repair protein RECN; DNA binding protein, ATP binding protein, double break repair, coiled-coil; HET: DNA; 2.04A {Deinococcus radiodurans}
Probab=32.27 E-value=1.5e+02 Score=26.37 Aligned_cols=97 Identities=11% Similarity=0.123 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCccc
Q 011759 252 SLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQRLLNEVKSLGESATSSAPAEL 331 (478)
Q Consensus 252 Al~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k~rl~~l~~~l~~~~~~~~~~~~~~~ 331 (478)
++..+..|+.....+.. .++.+...+-.|..++....+....+..|-..+.+=..||..++.++..+..
T Consensus 68 ~~~~L~~a~~~L~~l~~-~d~~l~~~~e~l~~a~~~l~d~~~~L~~y~~~le~DP~rL~~ie~RL~~l~~---------- 136 (175)
T 4abx_A 68 AAGLIGEAVRALNAGAK-YDETVMQLQNELRAALESVQAIAGELRDVAEGSAADPEALDRVEARLSALSK---------- 136 (175)
T ss_dssp HHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHH----------
T ss_pred HHHHHHHHHHHHHHHHH-hChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH----------
Confidence 44555555555554332 2344555555555555555555455555555444444555555444443321
Q ss_pred cccccccccccccchhhhHHHHHHHHHHhhHHHHHHHHHHHHH
Q 011759 332 DDGIQQSSSEFQNDKLLTDKEAEIETLSGLCGDLEKKLEDLQQ 374 (478)
Q Consensus 332 d~~~~~~~~~~~~~~~~~~~~~Ei~elk~ll~dl~~KieDlk~ 374 (478)
-..+....+++|-....+++.+|..|..
T Consensus 137 ---------------L~RKyg~~~eell~~~~~~~~eL~~l~~ 164 (175)
T 4abx_A 137 ---------------LKNKYGPTLEDVVEFGAQAAEELAGLEE 164 (175)
T ss_dssp ---------------HHHHHCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------HHHHcCCCHHHHHHHHHHHHHHHHHHhC
Confidence 0011112556677777777777777654
No 325
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=31.78 E-value=1.7e+02 Score=22.33 Aligned_cols=26 Identities=15% Similarity=0.220 Sum_probs=21.3
Q ss_pred hhHHHHHHHHHHhhHHHHHHHHHHHH
Q 011759 348 LTDKEAEIETLSGLCGDLEKKLEDLQ 373 (478)
Q Consensus 348 ~~~~~~Ei~elk~ll~dl~~KieDlk 373 (478)
....+.||.+|+-.|..|+..|+-||
T Consensus 51 l~~~k~Ei~elrr~iq~L~~el~slk 76 (77)
T 3trt_A 51 LRQAKQESTEYRRQVQSLTMEVDALK 76 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 45667899999999999998888765
No 326
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=31.75 E-value=99 Score=22.85 Aligned_cols=37 Identities=22% Similarity=0.289 Sum_probs=32.4
Q ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 011759 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRV 97 (478)
Q Consensus 61 ~~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~ 97 (478)
..+..|..+..-+.-.+...|+..|++.+.+||+++.
T Consensus 15 ~~i~~AqK~aK~AiSAL~feDv~tA~~~L~~AL~lL~ 51 (53)
T 2rkl_A 15 SKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLN 51 (53)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHh
Confidence 3566788888888889999999999999999999874
No 327
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=31.40 E-value=81 Score=24.89 Aligned_cols=36 Identities=19% Similarity=0.228 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHhhcCChhHHHHHHHhhhh
Q 011759 349 TDKEAEIETLSGLCGDLEKKLEDLQQVALFPKSILSEILGMASA 392 (478)
Q Consensus 349 ~~~~~Ei~elk~ll~dl~~KieDlk~~~~~p~~~~~e~~~~~~~ 392 (478)
+..+.|.+-||+-|.+|..|+..|+. -+.|||..++
T Consensus 11 ~AVREEVevLKe~I~EL~e~~~qLE~--------EN~~Lk~~as 46 (78)
T 1dip_A 11 YAVREEVEILKEQIRELVEKNSQLER--------ENTLLKTLAS 46 (78)
T ss_dssp GTCTTSCHHHHHHHHHHHHHHHHHHH--------HHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHhCC
Confidence 34556788899999999999999987 4667787765
No 328
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=30.62 E-value=1.2e+02 Score=26.29 Aligned_cols=17 Identities=12% Similarity=0.348 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHHh
Q 011759 250 ETSLSDYQKALTILERM 266 (478)
Q Consensus 250 eeAl~dy~kAL~I~~~l 266 (478)
..-+.+|.++++....+
T Consensus 39 ~~~~~e~~~~l~~l~~l 55 (151)
T 2zdi_C 39 KAEVQTVRETLENLKKI 55 (151)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 34455677777765544
No 329
>1vh6_A Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis} SCOP: a.24.19.1
Probab=29.72 E-value=81 Score=27.73 Aligned_cols=58 Identities=17% Similarity=0.099 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh------CCCChhHHHHHHHHHHHHHh
Q 011759 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY------GELALECVNAYYQYGRALLY 120 (478)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~------Ge~~pe~A~~y~~YG~ALl~ 120 (478)
.+-+...+.+++.++..|||+++.....+|..|..+.- |+.+..+..+|.++-+-|++
T Consensus 30 ydgal~~l~~A~~aie~~d~~~k~~~i~KA~~Ii~eL~~sLd~egeiA~nL~~LY~y~~~~L~~ 93 (145)
T 1vh6_A 30 YNGCLKFIRLAAQAIENDDMERKNENLIKAQNIIQELNFTLNRNIELSASMGAMYDYMYRRLVQ 93 (145)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHH
Confidence 44588889999999999999999999999999876554 44445555555555454443
No 330
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=29.68 E-value=61 Score=36.80 Aligned_cols=70 Identities=11% Similarity=0.114 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-------------HHhcCCC--ChHHHHHHHHHHHHHHcCCCchHHHHH
Q 011759 233 VDILSALAEVALEREDIETSLSDYQKALTIL-------------ERMVEPD--SRHIAELNFRICLCLEIGSKPQEAIPY 297 (478)
Q Consensus 233 Ad~~~~LGev~le~g~feeAl~dy~kAL~I~-------------~~llg~d--~r~iAea~~~LG~ay~~~~~~eeAl~~ 297 (478)
+.+ +.+|.+|+..|++++|..+|++|---. ..++++. ...++.=|+++...++..+-|+-++..
T Consensus 841 ~~~-yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~f 919 (950)
T 4gq2_M 841 IAV-YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEF 919 (950)
T ss_dssp HHH-HHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHH-HHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHH
Confidence 344 679999999999999999999874211 0011100 112233344455566666666666555
Q ss_pred HHHHHH
Q 011759 298 CQKAIS 303 (478)
Q Consensus 298 ~ekAL~ 303 (478)
.+.||.
T Consensus 920 A~lAI~ 925 (950)
T 4gq2_M 920 SLLADA 925 (950)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 555553
No 331
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=29.51 E-value=48 Score=27.30 Aligned_cols=97 Identities=13% Similarity=0.170 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHH
Q 011759 231 EKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQ 310 (478)
Q Consensus 231 ~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k~rl~ 310 (478)
.+......+-.+......+..-+..++.++.=...+-+.. .+|+.+|-+|... ..++|+...++-++.+...|.
T Consensus 14 ~~~~l~~~~~~l~~q~~~l~~~~~e~~~~~~eL~~l~~d~-----~vy~~iG~vfv~~-~~~ea~~~L~~~~e~ie~~i~ 87 (117)
T 2zqm_A 14 QLESYQQQLQLVVQQKQKVQLELTEAKKALDEIESLPDDA-----VVYKTVGTLIVKT-TKDKAVAELKEKIETLEVRLN 87 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTC-----CEEEEETTEEEEE-CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCc-----HhHHHhhHHHhhc-cHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHhhccCCCCCCCccccccccccccccccchhhhHHHHHHHHHHhhHHHH
Q 011759 311 RLLNEVKSLGESATSSAPAELDDGIQQSSSEFQNDKLLTDKEAEIETLSGLCGDL 365 (478)
Q Consensus 311 ~l~~~l~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~Ei~elk~ll~dl 365 (478)
.|+..++ .++.++++++.-|-.+
T Consensus 88 ~le~~~~--------------------------------~l~~~l~~lk~~l~~~ 110 (117)
T 2zqm_A 88 ALERQEK--------------------------------KLNEKLKELTAQIQSA 110 (117)
T ss_dssp HHHHHHH--------------------------------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHH--------------------------------HHHHHHHHHHHHHHHH
No 332
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=29.13 E-value=2.5e+02 Score=23.50 Aligned_cols=26 Identities=19% Similarity=0.314 Sum_probs=18.6
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHhhc
Q 011759 352 EAEIETLSGLCGDLEKKLEDLQQVAL 377 (478)
Q Consensus 352 ~~Ei~elk~ll~dl~~KieDlk~~~~ 377 (478)
+.-+..-+..+.-|+.||.+||.++.
T Consensus 74 K~tl~~R~~~Vsalq~KiaeLKrqLA 99 (107)
T 2k48_A 74 KSTLQNRRAAVSTLETKLGELKRQLA 99 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666777788888888888644
No 333
>1o3u_A Conserved hypothetical protein TM0613; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.75A {Thermotoga maritima} SCOP: a.24.16.3
Probab=28.76 E-value=1e+02 Score=26.23 Aligned_cols=36 Identities=22% Similarity=0.194 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 011759 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRV 97 (478)
Q Consensus 62 ~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~ 97 (478)
-+..|..-+..+...+..|.|+.|+-..++|++...
T Consensus 12 ~~~~A~~dL~~A~~~l~~g~y~~a~F~aqQA~Ekal 47 (135)
T 1o3u_A 12 HMDAAKDDLEHAKHDLEHGFYNWACFSSQQAAEKAV 47 (135)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHH
Confidence 467888999999999999999999999999999753
No 334
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=28.70 E-value=3.6e+02 Score=25.34 Aligned_cols=25 Identities=28% Similarity=0.237 Sum_probs=12.6
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHh
Q 011759 351 KEAEIETLSGLCGDLEKKLEDLQQV 375 (478)
Q Consensus 351 ~~~Ei~elk~ll~dl~~KieDlk~~ 375 (478)
+...+.+++.-+..|..+.+.|...
T Consensus 148 ~~~~~~e~~~e~~~l~~~r~~l~~~ 172 (256)
T 3na7_A 148 VENEVKNIKETQQIIFKKKEDLVEK 172 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3444445555555555555555544
No 335
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=28.52 E-value=81 Score=25.53 Aligned_cols=32 Identities=19% Similarity=0.232 Sum_probs=25.9
Q ss_pred hhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 011759 60 EKTVEFADELMEKGTNALKESDYGEAAECFSR 91 (478)
Q Consensus 60 ~~~l~~A~~L~~~G~~~~~~gdy~eAve~ys~ 91 (478)
...++.|..++.-|+-++..||+..|..|++=
T Consensus 29 ~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isY 60 (86)
T 2oo2_A 29 EGFMRNIEAYISDSRYFLEKGDLVRAFECVVW 60 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 46778899999999999999999888766543
No 336
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=27.95 E-value=57 Score=26.63 Aligned_cols=34 Identities=18% Similarity=0.236 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHcC---CCchHHHHHHHHHHHHHHHH
Q 011759 275 AELNFRICLCLEIG---SKPQEAIPYCQKAISVCKSR 308 (478)
Q Consensus 275 Aea~~~LG~ay~~~---~~~eeAl~~~ekAL~I~k~r 308 (478)
|-.|.+-|+..... |+.++|+.+|++.|.-+..-
T Consensus 16 AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~eL~~G 52 (89)
T 3eab_A 16 AFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKG 52 (89)
T ss_dssp HHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHhh
Confidence 44455555555555 78888999998877644433
No 337
>1orj_A Flagellar protein FLIS; flagellin, flagellar export, chaperone, flagellum, four HELI; 2.25A {Aquifex aeolicus} SCOP: a.24.19.1 PDB: 1ory_A
Probab=27.77 E-value=1e+02 Score=26.61 Aligned_cols=43 Identities=16% Similarity=0.122 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHcCCH-HHH---HHHHHHHHHHHHHhhCCCCh
Q 011759 63 VEFADELMEKGTNALKESDY-GEA---AECFSRALEIRVSHYGELAL 105 (478)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdy-~eA---ve~ys~Alei~~~~~Ge~~p 105 (478)
.+.+...+.+++.++..||| +++ .....+|..|..+.-.-...
T Consensus 26 ydgai~~l~~A~~ai~~~d~~~~k~~~~~~i~KA~~Ii~eL~~sLd~ 72 (130)
T 1orj_A 26 YDKAIECLERAIEIYDQVNELEKRKEFVENIDRVYDIISALKSFLDH 72 (130)
T ss_dssp HHHHHHHHHHHHHTGGGTTSHHHHHHHHHHHHHHHHHHHHHHHTCCT
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 44588888999999999999 999 89999999998777655443
No 338
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=27.44 E-value=86 Score=25.39 Aligned_cols=35 Identities=23% Similarity=0.185 Sum_probs=27.2
Q ss_pred hhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 011759 60 EKTVEFADELMEKGTNALKESDYGEAAECFSRALE 94 (478)
Q Consensus 60 ~~~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Ale 94 (478)
...++.|..++.-|+-++..||+..|..|++=|--
T Consensus 33 ~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~G 67 (87)
T 2pmr_A 33 EAVVERALNYRDDSVYYLEKGDHITSFGCITYAHG 67 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 45677888999999999999998888777654433
No 339
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=27.34 E-value=2.4e+02 Score=32.39 Aligned_cols=63 Identities=13% Similarity=-0.084 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChH-HHHHHHHHHHHHHcCCCchHHHHHH
Q 011759 232 KVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRH-IAELNFRICLCLEIGSKPQEAIPYC 298 (478)
Q Consensus 232 ~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~-iAea~~~LG~ay~~~~~~eeAl~~~ 298 (478)
+..-|..+..++-..+.|+.++..-+.||.. .+++... ....|.++=..+...++|++|....
T Consensus 898 l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~----~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL 961 (1139)
T 4fhn_B 898 LSCYYLHLSKKLFEESAYIDALEFSLLADAS----KETDDEDLSIAITHETLKTACAAGKFDAAHVAL 961 (1139)
T ss_dssp SHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH----CCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----ccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 4556777888888889999999999999864 3344443 4557888888888889999986655
No 340
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=27.31 E-value=53 Score=30.23 Aligned_cols=33 Identities=15% Similarity=0.148 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Q 011759 273 HIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 305 (478)
Q Consensus 273 ~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~ 305 (478)
+.+.=+|.+|..+...++|.+|..++..|+.-|
T Consensus 12 q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~ 44 (203)
T 3t5x_A 12 QRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHC 44 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHC
Confidence 456778999999999999999999999999874
No 341
>1wol_A ST0689, 122AA long conserved hypothetical protein; alpha helix, loop, unknown function; 1.62A {Sulfolobus tokodaii}
Probab=27.04 E-value=1.2e+02 Score=25.09 Aligned_cols=37 Identities=19% Similarity=0.075 Sum_probs=32.2
Q ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 011759 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRV 97 (478)
Q Consensus 61 ~~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~ 97 (478)
.-+..|..-+..+...+..|.|+.|+-..++|++...
T Consensus 6 ~wl~~A~~dL~~A~~~~~~g~y~~a~f~aqQa~Ek~l 42 (122)
T 1wol_A 6 DWIKQAERDLEEARYAKSGGYYELACFLSQQCAEKAV 42 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Confidence 3467788888999999999999999999999999753
No 342
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=26.81 E-value=1.1e+02 Score=33.07 Aligned_cols=51 Identities=18% Similarity=0.139 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhc
Q 011759 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQE 124 (478)
Q Consensus 66 A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~a~~ 124 (478)
++.++.+|+.++..|+|.-|+++...++.. .|++..+......+|-++|..
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~--------~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFA--------EPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--------CCCcHHHHHHHHHHHHHHHHh
Confidence 677899999999999999999999999887 799999999999999998754
No 343
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=26.73 E-value=86 Score=26.74 Aligned_cols=73 Identities=18% Similarity=0.257 Sum_probs=30.4
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCccccccccccccccccchhhhHHHHHHHHHHhhHHHHHH
Q 011759 288 GSKPQEAIPYCQKAISVCKSRVQRLLNEVKSLGESATSSAPAELDDGIQQSSSEFQNDKLLTDKEAEIETLSGLCGDLEK 367 (478)
Q Consensus 288 ~~~~eeAl~~~ekAL~I~k~rl~~l~~~l~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~Ei~elk~ll~dl~~ 367 (478)
.+++.+++.+.+.-|.=++..|..|+.+|.++.+-. +.+.. ...+.......++++++..|.+|+.
T Consensus 24 ~~~~~~~l~~~k~Ei~elrr~iq~L~~el~~l~~~~-----~~LE~---------~l~e~e~~~~~~l~~~q~~i~~lE~ 89 (129)
T 3tnu_B 24 AGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQC-----ANLQN---------AIADAEQRGELALKDARNKLAELEE 89 (129)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-----HHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555555555555566666666665553200 00000 0001112334456666677777776
Q ss_pred HHHHHHH
Q 011759 368 KLEDLQQ 374 (478)
Q Consensus 368 KieDlk~ 374 (478)
-|..++.
T Consensus 90 eL~~~r~ 96 (129)
T 3tnu_B 90 ALQKAKQ 96 (129)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 6666655
No 344
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=26.09 E-value=97 Score=22.69 Aligned_cols=29 Identities=7% Similarity=0.040 Sum_probs=22.3
Q ss_pred hhhHHHHHHHHHHhhHHHHHHHHHHHHHh
Q 011759 347 LLTDKEAEIETLSGLCGDLEKKLEDLQQV 375 (478)
Q Consensus 347 ~~~~~~~Ei~elk~ll~dl~~KieDlk~~ 375 (478)
....++.|+.+|+.=+..|..++++|+.-
T Consensus 20 d~eaLk~E~~eLk~k~~~L~~~~~el~~~ 48 (53)
T 2yy0_A 20 EIELLRLELAEMKEKYEAIVEENKKLKAK 48 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677888888888888888888888753
No 345
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=25.98 E-value=5.4e+02 Score=26.23 Aligned_cols=62 Identities=10% Similarity=0.060 Sum_probs=41.0
Q ss_pred cChHHHHHHHHHHHHHHHHHhcCC-CchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 011759 205 ESDLDLAWKMLDVARAIAEKHWGD-SMEKVDILSALAEVALEREDIETSLSDYQKALTILERM 266 (478)
Q Consensus 205 ~ddle~AwE~Le~Ar~I~ek~l~~-~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~l 266 (478)
..+|....+.|..-+.-|.+.... +..+-.++..|........+++..+..|-.-|+-+-.+
T Consensus 62 er~~~~rIe~L~~~L~~~s~s~~~~~~y~~~~~~~lk~~~~q~~dndn~~~e~s~eLe~~i~~ 124 (390)
T 1deq_A 62 DQDFTSRINKLRDSLFNYQKNSKDSNTLTKNIVELMRGDFAKANNNDNTFKQINEDLRSRIEI 124 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHH
Confidence 367777777777666666555332 23345677778888888888888877776666655443
No 346
>1lq7_A Alpha3W; three helix bundle, de novo protein; NMR {} SCOP: k.9.1.1
Probab=25.92 E-value=73 Score=23.62 Aligned_cols=19 Identities=42% Similarity=0.604 Sum_probs=11.4
Q ss_pred HHHHHHhhHHHHHHHHHHH
Q 011759 354 EIETLSGLCGDLEKKLEDL 372 (478)
Q Consensus 354 Ei~elk~ll~dl~~KieDl 372 (478)
.|++|+.--.+|..||++|
T Consensus 26 rieelkkkweelkkkieel 44 (67)
T 1lq7_A 26 RIEELKKKWEELKKKIEEL 44 (67)
T ss_dssp SHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHh
Confidence 4555666666666666655
No 347
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=25.89 E-value=73 Score=32.82 Aligned_cols=30 Identities=13% Similarity=-0.054 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Q 011759 274 IAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (478)
Q Consensus 274 iAea~~~LG~ay~~~~~~eeAl~~~ekAL~ 303 (478)
-.-++.-|+.+|.+.++|++|+.+.++.|.
T Consensus 196 k~aA~allarvyL~~~~~~~A~~~a~~vi~ 225 (478)
T 3hdx_A 196 KLSAYSVLAHICAWQGNYAEAETYSAFIID 225 (478)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 456777899999999999999998888775
No 348
>4b6x_A AVRRPS4, avirulence protein; toxin, type 3 secreted effector; 2.20A {Pseudomonas syringae PV}
Probab=25.29 E-value=1.4e+02 Score=23.92 Aligned_cols=34 Identities=24% Similarity=0.230 Sum_probs=27.4
Q ss_pred hhHHHHHHHHHHhhHHHHHHHHHHHHHhhcCChhH
Q 011759 348 LTDKEAEIETLSGLCGDLEKKLEDLQQVALFPKSI 382 (478)
Q Consensus 348 ~~~~~~Ei~elk~ll~dl~~KieDlk~~~~~p~~~ 382 (478)
..+++.+|+|-+.||..|.+.|.|..+- .||..|
T Consensus 24 ~~~lrq~I~DKQ~~i~~Lt~eLq~A~~e-aNpaeI 57 (90)
T 4b6x_A 24 GAALRQEIEDKQLMVNNLTDELQDAIDE-ANPAEI 57 (90)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHc-cCHHHH
Confidence 3578899999999999999999998763 355544
No 349
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=25.14 E-value=2e+02 Score=29.53 Aligned_cols=74 Identities=11% Similarity=0.120 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH------hcCCCC-----------------------------hHHHHHH
Q 011759 234 DILSALAEVALEREDIETSLSDYQKALTILER------MVEPDS-----------------------------RHIAELN 278 (478)
Q Consensus 234 d~~~~LGev~le~g~feeAl~dy~kAL~I~~~------llg~d~-----------------------------r~iAea~ 278 (478)
.-+..|++.+.+.++|-+|.-++..+..+.-. +++-+. ..+-+.+
T Consensus 12 ~wl~~La~~h~~~~n~~EAa~cl~~~aaliae~L~~~~~~~~~~~~f~~i~p~~~ee~~~~~d~g~~~~~fte~~l~~ll 91 (428)
T 2wm9_A 12 TWLDSMARIHVKNGDLSEAAMCYVHVTALVAEYLTRKGVFRQGCTAFRVITPNIDEEASMMEDVGMQDVHFNEDVLMELL 91 (428)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHTTSSSCCGGGGTTTCGGGGGGC---------CCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhcCCCccchhccccccCCCccccCHHHHHHHH
Confidence 34568999999999999999998765554433 222111 1122244
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHHHHHHH
Q 011759 279 FRICLCLEIGSKPQEAIPYCQKAISVCKS 307 (478)
Q Consensus 279 ~~LG~ay~~~~~~eeAl~~~ekAL~I~k~ 307 (478)
......+...+.|+.|+..|+..+.+++.
T Consensus 92 ~~ai~~f~kg~~~E~ai~~~k~L~~~ye~ 120 (428)
T 2wm9_A 92 EQCADGLWKAERYELIADIYKLIIPIYEK 120 (428)
T ss_dssp HHHHHHHHHTTCGGGHHHHHTTTHHHHHH
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 44555666777788888888877777664
No 350
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=25.03 E-value=69 Score=27.85 Aligned_cols=37 Identities=22% Similarity=0.219 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Q 011759 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSH 99 (478)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~ 99 (478)
++.|..|+..|.-++..||+.+|.+.|=+|++-..+.
T Consensus 4 l~lAe~yL~EA~ell~kGD~vQAsEK~ykAaeeaiKA 40 (129)
T 2jpu_A 4 STSAEVYYEEAEEFLSKGDLVQACEKYYKAAEEAIKL 40 (129)
T ss_dssp SCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 4568889999999999999999999999888865543
No 351
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=24.66 E-value=3.5e+02 Score=23.62 Aligned_cols=43 Identities=16% Similarity=0.081 Sum_probs=35.1
Q ss_pred hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHH
Q 011759 231 EKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIA 275 (478)
Q Consensus 231 ~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iA 275 (478)
+.|..+...|.+|...|++++|--.|-+-+.|...+ +.||..-
T Consensus 40 rsa~~L~r~A~~y~~EGd~E~AYilymRy~~L~~kI--pkHpdyk 82 (144)
T 2a9u_A 40 HSALKIFKTAEECRLDRDEERAYVLYMKYVTVYNLI--KKRPDFK 82 (144)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TTSHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH--hcCcchh
Confidence 456777788999999999999999999999999544 4676543
No 352
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=24.53 E-value=35 Score=22.79 Aligned_cols=15 Identities=27% Similarity=0.319 Sum_probs=9.4
Q ss_pred hHHHHHHHHHHhhHH
Q 011759 349 TDKEAEIETLSGLCG 363 (478)
Q Consensus 349 ~~~~~Ei~elk~ll~ 363 (478)
+.++.|+.-|++|++
T Consensus 17 ~~le~EV~Rl~~ll~ 31 (33)
T 2wq1_A 17 YHNTNEIARNTKLVG 31 (33)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhc
Confidence 455666666666664
No 353
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=24.40 E-value=3e+02 Score=22.70 Aligned_cols=29 Identities=14% Similarity=0.199 Sum_probs=20.1
Q ss_pred hhhHHHHHHHHHHhhHH--------HHHHHHHHHHHh
Q 011759 347 LLTDKEAEIETLSGLCG--------DLEKKLEDLQQV 375 (478)
Q Consensus 347 ~~~~~~~Ei~elk~ll~--------dl~~KieDlk~~ 375 (478)
....++..|.+|+..|. +|+.|+++|++.
T Consensus 47 ek~~I~~~i~el~~~L~~~~~ad~e~ik~k~~eL~~~ 83 (120)
T 2p32_A 47 DKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGL 83 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHH
Confidence 34567778888876664 467777777765
No 354
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=24.37 E-value=1.4e+02 Score=24.94 Aligned_cols=36 Identities=14% Similarity=0.043 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh
Q 011759 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHY 100 (478)
Q Consensus 65 ~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~ 100 (478)
.|..+.-.+-.+.+.|||++|-+++.+|-+.+.+-|
T Consensus 19 ~ArS~~~eAl~~Ak~g~fe~A~~~l~eA~~~l~~AH 54 (105)
T 2e2a_A 19 DARSKLLEALKAAENGDFAKADSLVVEAGSCIAEAH 54 (105)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 467777788888899999999999999988765433
No 355
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=24.35 E-value=1.7e+02 Score=29.48 Aligned_cols=54 Identities=19% Similarity=0.299 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhc----C---CC-ChHHHHHHHHHHHHHH
Q 011759 232 KVDILSALAEVALEREDIETSLSDYQKALTILERMV----E---PD-SRHIAELNFRICLCLE 286 (478)
Q Consensus 232 ~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~ll----g---~d-~r~iAea~~~LG~ay~ 286 (478)
++-+|..+|.-.... ....|+.+|++|--++.-+. + +| ++.+..++.+|.++..
T Consensus 129 laal~s~~A~~~~r~-~lk~A~~~fq~AAG~f~~l~~~~~~~~~~Dls~~~l~~L~~l~LAQA 190 (392)
T 1zb1_A 129 IAVIFTQIARENINE-DYKNSIANLTKAFSCFEYLSENFLNSPSVDLQSENTRFLANICHAEA 190 (392)
T ss_dssp HHHHHHHHHHHTTTS-SSHHHHHHHHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHHHHHHH
Confidence 555666677644444 78999999999988877542 2 12 6778888888777663
No 356
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=24.23 E-value=1.3e+02 Score=22.18 Aligned_cols=34 Identities=32% Similarity=0.439 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 011759 232 KVDILSALAEVALEREDIETSLSDYQKALTILER 265 (478)
Q Consensus 232 ~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~ 265 (478)
.|+=|...+.-.+.-++...|+..+++||++...
T Consensus 19 ~AqK~aK~AiSAL~feDv~tA~~~L~~AL~lL~~ 52 (53)
T 2rkl_A 19 QIQKLAKYAISALNYEDLPTAKDELTKALDLLNS 52 (53)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhc
Confidence 4666778888889999999999999999998753
No 357
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=24.17 E-value=5.2e+02 Score=29.59 Aligned_cols=59 Identities=15% Similarity=0.101 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHc
Q 011759 213 KMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI 287 (478)
Q Consensus 213 E~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~ 287 (478)
++|+.+..||.+... + -|..+-.+.+.+++.+.+.+.|.+++. .+++ ...|+|++-+..
T Consensus 216 ~vLr~l~~Iy~k~~~--~----dy~~a~~~ai~LnD~~li~~if~~l~~-------~~d~---l~ayQiAFdL~~ 274 (963)
T 4ady_A 216 SILRKSFDFLMNMPN--C----DYLTLNKVVVNLNDAGLALQLFKKLKE-------ENDE---GLSAQIAFDLVS 274 (963)
T ss_dssp HHHHHHHHHHHHSSS--C----CHHHHHHHHHHHTCHHHHHHHHHHHHT-------TCCH---HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCc--h----hHHHHHHHHHHcCCHHHHHHHHHHHHh-------cccH---HHHHHHHHHHhc
Confidence 579999999998742 1 256667778888899999999988763 2333 334677666654
No 358
>1ufb_A TT1696 protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.90A {Thermus thermophilus} SCOP: a.24.16.3
Probab=24.16 E-value=1.2e+02 Score=24.98 Aligned_cols=35 Identities=23% Similarity=0.155 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 011759 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIR 96 (478)
Q Consensus 62 ~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~ 96 (478)
-+..|..-+..+...+..|.|+.|+-..++|++..
T Consensus 7 w~~~A~~~L~~A~~~~~~g~y~~a~f~a~qa~Ek~ 41 (127)
T 1ufb_A 7 WLEQARHNLRHAQGSLGLGDYAWACFAAQQAAEAA 41 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHH
Confidence 46778888888999999999999999999999975
No 359
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=23.90 E-value=1.4e+02 Score=24.75 Aligned_cols=36 Identities=14% Similarity=0.074 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh
Q 011759 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHY 100 (478)
Q Consensus 65 ~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~ 100 (478)
.|..+.-.+-.+.+.|||++|-+++.+|-+.+.+-|
T Consensus 17 ~Ars~~~eAl~~Ak~g~fe~A~~~l~eA~~~l~~AH 52 (103)
T 1wcr_A 17 QARSLAYAALKQAKQGDFAAAKAMMDQSRMALNEAH 52 (103)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 467777788888899999999999999988765433
No 360
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=23.67 E-value=84 Score=32.78 Aligned_cols=71 Identities=10% Similarity=0.107 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCC----CChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH-HH
Q 011759 234 DILSALAEVALEREDIETSLSDYQKALTILERMVEP----DSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV-CK 306 (478)
Q Consensus 234 d~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~----d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I-~k 306 (478)
-.-++|=.+|+..++..-+-..++ +++-. ..+++ .-.+.+.=+|.+|..|...++|.+|..++..|+.. |.
T Consensus 177 ~l~n~L~kiYFkl~~~~lckni~k-~i~~~-~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp 252 (455)
T 3t5v_B 177 YLVNKLNNIYFRIESPQLCSNIFK-NFQPK-SMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLN 252 (455)
T ss_dssp HHHHHHHHHHHHSSCCTTHHHHHH-THHHH-CCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHH-HhccC-CCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCC
Confidence 445566789999999988877774 44433 12111 12357888999999999999999999999999998 55
No 361
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=23.57 E-value=2.2e+02 Score=22.57 Aligned_cols=27 Identities=11% Similarity=0.016 Sum_probs=16.9
Q ss_pred hhHHHHHHHHHHhhHHHHHHHHHHHHH
Q 011759 348 LTDKEAEIETLSGLCGDLEKKLEDLQQ 374 (478)
Q Consensus 348 ~~~~~~Ei~elk~ll~dl~~KieDlk~ 374 (478)
+..+..++.+++.-|..+..|=++|..
T Consensus 58 ~~~l~~~l~~~e~eLe~~~erWeeLe~ 84 (89)
T 2lw1_A 58 TQKVLADMAAAEQELEQAFERWEYLEA 84 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566666666666666666666654
No 362
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=23.35 E-value=80 Score=27.06 Aligned_cols=23 Identities=17% Similarity=0.406 Sum_probs=15.0
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHH
Q 011759 352 EAEIETLSGLCGDLEKKLEDLQQ 374 (478)
Q Consensus 352 ~~Ei~elk~ll~dl~~KieDlk~ 374 (478)
..++++++..|.+|+.-|..++.
T Consensus 76 ~~~l~~~q~~i~~lE~eL~~~r~ 98 (131)
T 3tnu_A 76 CMQLAQIQEMIGSVEEQLAQLRC 98 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44666666777777776666655
No 363
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=23.11 E-value=3.6e+02 Score=27.51 Aligned_cols=34 Identities=12% Similarity=0.059 Sum_probs=29.7
Q ss_pred CchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 011759 229 SMEKVDILSALAEVALEREDIETSLSDYQKALTI 262 (478)
Q Consensus 229 ~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I 262 (478)
++...-++..||.||+-.++|++|+...++++.-
T Consensus 193 r~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 193 LFNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 4456779999999999999999999999998864
No 364
>4abx_A DNA repair protein RECN; DNA binding protein, ATP binding protein, double break repair, coiled-coil; HET: DNA; 2.04A {Deinococcus radiodurans}
Probab=23.09 E-value=1.2e+02 Score=27.11 Aligned_cols=73 Identities=11% Similarity=0.070 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCc
Q 011759 212 WKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKP 291 (478)
Q Consensus 212 wE~Le~Ar~I~ek~l~~~~~~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~ 291 (478)
...|..|+..+.+.....+.+...+..|..++....+...-+..|... +..+..++..+.-+|...+....+|
T Consensus 69 ~~~L~~a~~~L~~l~~~d~~l~~~~e~l~~a~~~l~d~~~~L~~y~~~-------le~DP~rL~~ie~RL~~l~~L~RKy 141 (175)
T 4abx_A 69 AGLIGEAVRALNAGAKYDETVMQLQNELRAALESVQAIAGELRDVAEG-------SAADPEALDRVEARLSALSKLKNKY 141 (175)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------CCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 344455555554444444455666666666666655555555444433 2333344677777777777655554
No 365
>2hsb_A Hypothetical UPF0332 protein AF0298; DUF103 family, structural genomics, joint center for structu genomics, JCSG; HET: MSE PG4; 1.95A {Archaeoglobus fulgidus}
Probab=23.03 E-value=1.6e+02 Score=24.09 Aligned_cols=36 Identities=11% Similarity=0.110 Sum_probs=31.5
Q ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 011759 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIR 96 (478)
Q Consensus 61 ~~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~ 96 (478)
.-+..|...+..+...+..|+|..|+....+|+...
T Consensus 7 ~~l~~A~~~L~~A~~~~~~g~y~~a~~~ay~a~~~a 42 (126)
T 2hsb_A 7 LRIRKAEKLVQDAKKEFEMGLYERCCSTAYYAMFHA 42 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 357789999999999999999999999888888764
No 366
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=22.76 E-value=2.8e+02 Score=21.71 Aligned_cols=26 Identities=19% Similarity=0.325 Sum_probs=15.3
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHH
Q 011759 349 TDKEAEIETLSGLCGDLEKKLEDLQQ 374 (478)
Q Consensus 349 ~~~~~Ei~elk~ll~dl~~KieDlk~ 374 (478)
..++++|.+....|.+|+..|..++.
T Consensus 43 ~eLEk~L~ekd~eI~~LqseLDKfrS 68 (72)
T 3nmd_A 43 DELELELDQKDELIQMLQNELDKYRS 68 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 34455666666666666666655544
No 367
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=22.51 E-value=2.4e+02 Score=28.24 Aligned_cols=49 Identities=22% Similarity=0.184 Sum_probs=36.8
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHH
Q 011759 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNA 110 (478)
Q Consensus 62 ~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~Ge~~pe~A~~ 110 (478)
++......+..|.+++..|+|.+|+.+|...|-...=.-=+...+..++
T Consensus 110 ~l~~L~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~ 158 (325)
T 3mv2_A 110 GLDVVNEKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLA 158 (325)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHH
Confidence 5566666888999999999999999999999987643333344454554
No 368
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=22.25 E-value=81 Score=25.45 Aligned_cols=73 Identities=18% Similarity=0.170 Sum_probs=37.5
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 011759 236 LSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQRLLN 314 (478)
Q Consensus 236 ~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k~rl~~l~~ 314 (478)
...+-.+......+..-+..+..++.=...+ +++. .+|+.+|-+|... ..++|....++-++.+..+|..|+.
T Consensus 14 q~~~~~l~~q~~~l~~~~~e~~~~~~EL~~l-~~d~----~vy~~iG~vfv~~-~~~e~~~~L~~~~e~i~~~i~~le~ 86 (107)
T 1fxk_A 14 QQQAQAISVQKQTVEMQINETQKALEELSRA-ADDA----EVYKSSGNILIRV-AKDELTEELQEKLETLQLREKTIER 86 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-CTTC----CEEEEETTEEEEE-CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCCc----hHHHHHhHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444455555555555444433 2222 3566677665443 4567777666655555555555433
No 369
>3l8r_A PTCA, putative PTS system, cellobiose-specific IIA component; helix; 2.50A {Streptococcus mutans} SCOP: a.7.2.0
Probab=21.90 E-value=1.6e+02 Score=25.24 Aligned_cols=36 Identities=17% Similarity=0.187 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh
Q 011759 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHY 100 (478)
Q Consensus 65 ~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~ 100 (478)
.|..+.-.+-.+.+.|||++|.+++.+|-+.+.+-|
T Consensus 36 ~ARS~~~eAl~~Ak~gdfe~A~~~l~eA~e~l~~AH 71 (120)
T 3l8r_A 36 NARSIVHEAFDAMREKNYILAEQKLQEANDELLKAH 71 (120)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 467777777778889999999999999987655433
No 370
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=21.86 E-value=1.6e+02 Score=24.67 Aligned_cols=36 Identities=19% Similarity=0.104 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh
Q 011759 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHY 100 (478)
Q Consensus 65 ~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~~ 100 (478)
.|..+.-.+-.+.+.|||++|-+++.+|-+-+.+-|
T Consensus 21 ~Ars~~~eAl~~Ak~gdfe~A~~~l~eA~~~l~~AH 56 (109)
T 3k1s_A 21 NARSFAMEALQFAKQGKMAEADEAMVKAKEAINEAH 56 (109)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 477777788888899999999999999987655433
No 371
>3f6n_A Virion-associated protein; coiled-coil, viral protein, tetramer, DNA-binding, D binding protein; 3.10A {Cauliflower mosaic virus}
Probab=21.73 E-value=99 Score=26.66 Aligned_cols=23 Identities=4% Similarity=0.170 Sum_probs=12.7
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHH
Q 011759 350 DKEAEIETLSGLCGDLEKKLEDL 372 (478)
Q Consensus 350 ~~~~Ei~elk~ll~dl~~KieDl 372 (478)
+++.+|+++..++.+|...|..+
T Consensus 6 ~i~~ei~e~~~~i~~l~~~Ik~i 28 (129)
T 3f6n_A 6 QIQKEVSEILSDQKSMKADIKAI 28 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556666655555555555543
No 372
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=21.63 E-value=4.8e+02 Score=27.81 Aligned_cols=45 Identities=13% Similarity=0.093 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011759 275 AELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQRLLNEVKSL 319 (478)
Q Consensus 275 Aea~~~LG~ay~~~~~~eeAl~~~ekAL~I~k~rl~~l~~~l~~~ 319 (478)
....-+-...+++..++++=|.+.+.=|.-...+|..|++.|+.+
T Consensus 99 ~q~~dNdNtynE~S~ELRRrIqyLKekVdnQlsnIrvLQsnLedq 143 (562)
T 3ghg_A 99 SSANNRDNTYNRVSEDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQ 143 (562)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333444444777777777776666666777776666544
No 373
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=21.48 E-value=58 Score=33.74 Aligned_cols=27 Identities=15% Similarity=-0.081 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHcCCCchHHHHHHHHHH
Q 011759 276 ELNFRICLCLEIGSKPQEAIPYCQKAI 302 (478)
Q Consensus 276 ea~~~LG~ay~~~~~~eeAl~~~ekAL 302 (478)
-++.-|+.+|.+.++|++|+.++++.+
T Consensus 181 aA~allarvyL~~~~~~~A~~~a~~vi 207 (481)
T 3jq1_A 181 AAYAALGKIYVYEENWQEAINVLEPLT 207 (481)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 456679999999999999888876654
No 374
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=21.35 E-value=1.7e+02 Score=25.38 Aligned_cols=28 Identities=14% Similarity=0.304 Sum_probs=14.0
Q ss_pred HHcCCCchHHHHHHHHHHHHHHHHHHHH
Q 011759 285 LEIGSKPQEAIPYCQKAISVCKSRVQRL 312 (478)
Q Consensus 285 y~~~~~~eeAl~~~ekAL~I~k~rl~~l 312 (478)
|.....+++|+.+|++=++.+..++..+
T Consensus 90 ~~vE~~~~eA~~~l~~ri~~l~~~l~~l 117 (151)
T 2zdi_C 90 YAVERSIDEAISFLEKRLKEYDEAIKKT 117 (151)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333345677776655444444444433
No 375
>4fi5_A Nucleoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.20A {Hantaan virus}
Probab=21.31 E-value=3.8e+02 Score=22.70 Aligned_cols=26 Identities=12% Similarity=0.334 Sum_probs=18.1
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHhhc
Q 011759 352 EAEIETLSGLCGDLEKKLEDLQQVAL 377 (478)
Q Consensus 352 ~~Ei~elk~ll~dl~~KieDlk~~~~ 377 (478)
+.-+..-+..+.-|+.||.+|+.++.
T Consensus 61 K~tl~~R~~~Vs~lq~KiaeLKrqLA 86 (113)
T 4fi5_A 61 KRTLTDREGVAVSIQAKIDELKRQLA 86 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555566777778888888887644
No 376
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=21.19 E-value=7.6e+02 Score=26.29 Aligned_cols=27 Identities=19% Similarity=0.190 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011759 293 EAIPYCQKAISVCKSRVQRLLNEVKSL 319 (478)
Q Consensus 293 eAl~~~ekAL~I~k~rl~~l~~~l~~~ 319 (478)
.-|..+|..|+-+...|++|+..|..+
T Consensus 131 snIrvLQsnLedq~~kIQRLEvDIdiq 157 (562)
T 3ghg_A 131 QHIQLLQKNVRAQLVDMKRLEVDIDIK 157 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566666666677777777665543
No 377
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=21.04 E-value=60 Score=21.66 Aligned_cols=15 Identities=13% Similarity=0.180 Sum_probs=11.0
Q ss_pred hHHHHHHHHHHhhHH
Q 011759 349 TDKEAEIETLSGLCG 363 (478)
Q Consensus 349 ~~~~~Ei~elk~ll~ 363 (478)
..++.|+.-|++||+
T Consensus 17 ~~Le~EV~RLk~lL~ 31 (33)
T 3c3g_A 17 YHXENXLARIKXLLX 31 (33)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHc
Confidence 566777777887775
No 378
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=20.85 E-value=1e+02 Score=32.18 Aligned_cols=30 Identities=7% Similarity=-0.013 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Q 011759 274 IAELNFRICLCLEIGSKPQEAIPYCQKAIS 303 (478)
Q Consensus 274 iAea~~~LG~ay~~~~~~eeAl~~~ekAL~ 303 (478)
-.-++.-|+.+|.+.++|++|+.++++.|.
T Consensus 181 k~aA~allarv~L~~~~~~~A~~~a~~vi~ 210 (517)
T 3qnk_A 181 KGAAYALKSRVELYDKRYEDVIKSCAEVYK 210 (517)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677899999999999999988888764
No 379
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=20.74 E-value=3.2e+02 Score=21.68 Aligned_cols=22 Identities=14% Similarity=0.132 Sum_probs=18.1
Q ss_pred HHHHHHhhHHHHHHHHHHHHHh
Q 011759 354 EIETLSGLCGDLEKKLEDLQQV 375 (478)
Q Consensus 354 Ei~elk~ll~dl~~KieDlk~~ 375 (478)
--.+|+.++.-|.-||.||.++
T Consensus 46 ~~~Elk~l~e~Ld~KI~eL~el 67 (79)
T 3cvf_A 46 ARAEVGRAAQLLDVSLFELSEL 67 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHH
Confidence 3457888899999999999775
No 380
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=20.62 E-value=2.8e+02 Score=22.80 Aligned_cols=48 Identities=25% Similarity=0.342 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHH-HHHHHHH
Q 011759 232 KVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELN-FRICLCL 285 (478)
Q Consensus 232 ~Ad~~~~LGev~le~g~feeAl~dy~kAL~I~~~llg~d~r~iAea~-~~LG~ay 285 (478)
.++....-|.-..+.++|-+|+..|++++.+- +++.|-.++ |.|+-|-
T Consensus 52 ~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~t------en~~i~ki~~fyl~ec~ 100 (106)
T 2vkj_A 52 KARSLIAEGKDLFETANYGEALVFFEKALNLS------DNEEIKKIASFYLEECR 100 (106)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHHccc------cCHHHHHHHHHHHHHHH
Confidence 46677777788899999999999999987553 455666666 6666654
No 381
>4fx5_A VON willebrand factor type A; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, blood clotting; HET: MSE; 1.73A {Catenulispora acidiphila}
Probab=20.58 E-value=1.3e+02 Score=31.06 Aligned_cols=38 Identities=18% Similarity=0.275 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Q 011759 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSH 99 (478)
Q Consensus 62 ~l~~A~~L~~~G~~~~~~gdy~eAve~ys~Alei~~~~ 99 (478)
.+..+..++.+|...+..||++.|..++++|..+..+.
T Consensus 378 ~~~~~a~~~~~a~~~~~~gd~~~A~~~L~~A~~~~~~~ 415 (464)
T 4fx5_A 378 GQAEMAAAIQEGLDAQAAGDLDTATARLGRAMDLAVES 415 (464)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 34568888999999999999999999999999986543
No 382
>3hh0_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, 11183J, structural genomics; 2.67A {Bacillus cereus atcc 14579}
Probab=20.45 E-value=1e+02 Score=26.84 Aligned_cols=44 Identities=14% Similarity=0.099 Sum_probs=35.2
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHhhcCChhHHHHHHHhhhh
Q 011759 349 TDKEAEIETLSGLCGDLEKKLEDLQQVALFPKSILSEILGMASA 392 (478)
Q Consensus 349 ~~~~~Ei~elk~ll~dl~~KieDlk~~~~~p~~~~~e~~~~~~~ 392 (478)
..++.+|++|+.++..|+.+|..++.......++...+++.++.
T Consensus 90 ~~L~~~i~~l~~~l~~l~~~i~~~~~~~~~~~~~~~~Li~~~~~ 133 (146)
T 3hh0_A 90 EVLLAEQERIAKVLSHMDEMTKKFQKEERVNVALFSSFLQTFIW 133 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHHH
Confidence 35677899999999999999998887666666777788887765
No 383
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=20.24 E-value=3.3e+02 Score=21.64 Aligned_cols=28 Identities=18% Similarity=0.404 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 011759 349 TDKEAEIETLSGLCGDLEKKLEDLQQVA 376 (478)
Q Consensus 349 ~~~~~Ei~elk~ll~dl~~KieDlk~~~ 376 (478)
..++.||..|++.+.++.-.|+.+++-.
T Consensus 30 ~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQ 57 (83)
T 2xdj_A 30 SDNQSDIDSLRGQIQENQYQLNQVVERQ 57 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3567788888888888888888887643
No 384
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=20.20 E-value=3.4e+02 Score=28.44 Aligned_cols=25 Identities=20% Similarity=0.416 Sum_probs=18.3
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHhh
Q 011759 352 EAEIETLSGLCGDLEKKLEDLQQVA 376 (478)
Q Consensus 352 ~~Ei~elk~ll~dl~~KieDlk~~~ 376 (478)
...|..|+.++..|..||..|+..+
T Consensus 167 ~~~i~~L~~~~~~l~~ki~~l~~~~ 191 (464)
T 1m1j_B 167 PSSLRVLRAVIDSLHKKIQKLENAI 191 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777788888888888777643
Done!