BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011760
(478 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9H490|PIGU_HUMAN Phosphatidylinositol glycan anchor biosynthesis class U protein
OS=Homo sapiens GN=PIGU PE=1 SV=3
Length = 435
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 141/449 (31%), Positives = 215/449 (47%), Gaps = 60/449 (13%)
Query: 42 SSRPEVATPVTSIRRLAEGYWLKQSSMSPYAGSMYHGSPLLLSLIGPLTVKRIEGQPNHL 101
S R EV +P++S +R+ EG L +SPY+G+++H +PL++ L H
Sbjct: 29 SERVEVVSPLSSWKRVVEGLSLLDLGVSPYSGAVFHETPLIIYLF-------------HF 75
Query: 102 L---CSLLFSLADVVSAMLIRATGQTLQMSSCLSLKSL--------DLVELSKNS-EMLS 149
L L+F + D ++A+ + Q K L D+ EL + EM
Sbjct: 76 LIDYAELVFMITDALTAIALYFAIQDFNKVVFKKQKLLLELDQYAPDVAELIRTPMEMRY 135
Query: 150 SGDIAALVYLWNPFTIVACVGLSTSPIENLVVILSLYGACTRLAPLAAFGWVMGTHLSLY 209
AL YL NP+TI++CV ST I N ++ + A L+A + T+ SLY
Sbjct: 136 IPLKVALFYLLNPYTILSCVAKSTCAINNTLIAFFILTTIKGSAFLSAIFLALATYQSLY 195
Query: 210 PGVLIIPLILLLGNGPDAPPRKLFLQRRCSKGGKNPSSDSSCQEEELFNQSKLPITFSWK 269
P L +P +L L LQR Q + +SK FSW+
Sbjct: 196 PLTLFVPGLLYL------------LQR---------------QYIPVKMKSKAFWIFSWE 228
Query: 270 PVIHFLFWASIWSVYVLVLCGISVKQNGGMLEMFKSTYGFILTVEDLSPNIGVLWYFFAE 329
+ + + S+ V++ + + + + YGFIL+V DL+PNIG+ WYFFAE
Sbjct: 229 YAMMY-----VGSLVVIICLSFFLLSSWDFI---PAVYGFILSVPDLTPNIGLFWYFFAE 280
Query: 330 VFEFFRNFFLIVFHMNILVMILPLAIRLNHRPCFLAFVYIAISSMLKSYPSVGDSALYLG 389
+FE F FF+ VF +N+ +PLAI+L P F F+ IA+ ++ KSYP+VGD ALY+
Sbjct: 281 MFEHFSLFFVCVFQINVFFYTIPLAIKLKEHPIFFMFIQIAVIAIFKSYPTVGDVALYMA 340
Query: 390 LLGWFVFELADLQFSFFLFWGCVGVSLLSPVMHNLWIWRGTGNANFYYATAMAFACFQIV 449
+ L+ F L + SLL PV+ +LWI+ G+ N+NF+YA + F QI+
Sbjct: 341 FFPVWNHLYRFLRNIFVLTCIIIVCSLLFPVLWHLWIYAGSANSNFFYAITLTFNVGQIL 400
Query: 450 LVVESVSAILNYDRKLRKLSVTKPVDGKS 478
L+ + A L + L DG
Sbjct: 401 LISDYFYAFLRREYYLTHGLYLTAKDGTE 429
>sp|Q8CHJ1|PIGU_RAT Phosphatidylinositol glycan anchor biosynthesis class U protein
OS=Rattus norvegicus GN=Pigu PE=1 SV=3
Length = 435
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 143/449 (31%), Positives = 214/449 (47%), Gaps = 60/449 (13%)
Query: 42 SSRPEVATPVTSIRRLAEGYWLKQSSMSPYAGSMYHGSPLLLSLIGPLTVKRIEGQPNHL 101
S R EV +P++S +R+ EG L +SPY+G+++H +PL++ L H
Sbjct: 29 SERVEVVSPLSSWKRVVEGLALLDLGVSPYSGAVFHETPLIIYLF-------------HF 75
Query: 102 L---CSLLFSLADVVSAMLIRATGQTLQMSSCLSLKSL--------DLVELSKNS-EMLS 149
L L+F + D ++A+ + Q K L D+ EL + EM
Sbjct: 76 LIDYAELVFMITDALTAIALYFAIQDFNKVVFKKQKLLLELDQYAPDVAELIRTPMEMRY 135
Query: 150 SGDIAALVYLWNPFTIVACVGLSTSPIENLVVILSLYGACTRLAPLAAFGWVMGTHLSLY 209
AL YL NP+TI++CV ST I N ++ + L+A + T+ SLY
Sbjct: 136 IPLKVALFYLLNPYTILSCVAKSTCAINNTLIAFFILTTIKGSVFLSAIFLALATYQSLY 195
Query: 210 PGVLIIPLILLLGNGPDAPPRKLFLQRRCSKGGKNPSSDSSCQEEELFNQSKLPITFSWK 269
P L P +L L LQR Q + +SK FSW+
Sbjct: 196 PITLFAPGLLYL------------LQR---------------QYIPVKVKSKAFWIFSWE 228
Query: 270 PVIHFLFWASIWSVYVLVLCGISVKQNGGMLEMFKSTYGFILTVEDLSPNIGVLWYFFAE 329
+A +++ ++V+ +S + + YGFIL+V DL+PNIG+ WYFFAE
Sbjct: 229 -------YAMMYTGSLVVIVCLSFFLLSSW-DFIPAVYGFILSVPDLTPNIGLFWYFFAE 280
Query: 330 VFEFFRNFFLIVFHMNILVMILPLAIRLNHRPCFLAFVYIAISSMLKSYPSVGDSALYLG 389
+FE F FF+ VF +N+ +PLAI+L P F F+ IAI S+ KSYP+VGD ALY+
Sbjct: 281 MFEHFSLFFVCVFQINVFFYTVPLAIKLKEHPIFFMFIQIAIISIFKSYPTVGDVALYMA 340
Query: 390 LLGWFVFELADLQFSFFLFWGCVGVSLLSPVMHNLWIWRGTGNANFYYATAMAFACFQIV 449
+ L+ F L + SLL PV+ +LWI+ G+ N+NF+YA + F QI+
Sbjct: 341 FFPVWSHLYRFLRNIFVLTCIIIVCSLLFPVLWHLWIYAGSANSNFFYAITLTFNVGQIL 400
Query: 450 LVVESVSAILNYDRKLRKLSVTKPVDGKS 478
L+ + A L + L DG
Sbjct: 401 LISDYFYAFLRREYYLTHGLYLTAKDGTE 429
>sp|Q8CHJ0|PIGU_CRIGR Phosphatidylinositol glycan anchor biosynthesis class U protein
OS=Cricetulus griseus GN=PIGU PE=1 SV=3
Length = 435
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 144/449 (32%), Positives = 213/449 (47%), Gaps = 60/449 (13%)
Query: 42 SSRPEVATPVTSIRRLAEGYWLKQSSMSPYAGSMYHGSPLLLSLIGPLTVKRIEGQPNHL 101
S R EV +P++S +R+ EG L +SPY+G+++H +PL++ L H
Sbjct: 29 SERVEVVSPLSSWKRVVEGLSLLDLGVSPYSGAVFHETPLIIYLF-------------HF 75
Query: 102 L---CSLLFSLADVVSAMLIRATGQTLQMSSCLSLKSL--------DLVELSKNS-EMLS 149
L L+F + D ++A+ + Q K L D+ EL + EM
Sbjct: 76 LIDYAELVFMITDALTAIALYFAIQDFNKVVFKKQKLLLELDQYAPDVAELIRTPMEMRY 135
Query: 150 SGDIAALVYLWNPFTIVACVGLSTSPIENLVVILSLYGACTRLAPLAAFGWVMGTHLSLY 209
AL YL NP+TI++CV ST I N ++ + L+A + T+ +LY
Sbjct: 136 IPLKVALFYLLNPYTILSCVAKSTCAINNTLIAFFILTTIKGSVFLSAIFLALATYQTLY 195
Query: 210 PGVLIIPLILLLGNGPDAPPRKLFLQRRCSKGGKNPSSDSSCQEEELFNQSKLPITFSWK 269
P L P +L L LQR Q + +SK FSW+
Sbjct: 196 PVTLFAPGLLYL------------LQR---------------QYIPVKVKSKAFWIFSWE 228
Query: 270 PVIHFLFWASIWSVYVLVLCGISVKQNGGMLEMFKSTYGFILTVEDLSPNIGVLWYFFAE 329
+ + I S+ V+V + + + + YGFIL+V DL+PNIG+ WYFFAE
Sbjct: 229 YAMMY-----IGSLVVIVCLSFFLLSSWDFI---PAVYGFILSVPDLTPNIGLFWYFFAE 280
Query: 330 VFEFFRNFFLIVFHMNILVMILPLAIRLNHRPCFLAFVYIAISSMLKSYPSVGDSALYLG 389
+FE F FF+ VF +N+ +PLAI+L P F F+ IAI S+ KSYP+VGD ALY+
Sbjct: 281 MFEHFSLFFVCVFQINVFFYTVPLAIKLKEHPIFFMFIQIAIISIFKSYPTVGDVALYMA 340
Query: 390 LLGWFVFELADLQFSFFLFWGCVGVSLLSPVMHNLWIWRGTGNANFYYATAMAFACFQIV 449
+ L+ F L V SLL PV+ +LWI+ G+ N+NF+YA + F QI+
Sbjct: 341 FFPVWNHLYRFLRNVFVLTCIIVVCSLLFPVLWHLWIYAGSANSNFFYAITLTFNVGQIL 400
Query: 450 LVVESVSAILNYDRKLRKLSVTKPVDGKS 478
L+ + A L + L DG
Sbjct: 401 LISDYFYAFLRREYYLTHGLYLTAKDGTE 429
>sp|Q8K358|PIGU_MOUSE Phosphatidylinositol glycan anchor biosynthesis class U protein
OS=Mus musculus GN=Pigu PE=2 SV=4
Length = 434
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 139/448 (31%), Positives = 213/448 (47%), Gaps = 59/448 (13%)
Query: 42 SSRPEVATPVTSIRRLAEGYWLKQSSMSPYAGSMYHGSPLLLSLIGPLTVKRIEGQPNHL 101
S R EV +P++S +R+ EG L +SPY+G+++H +PL++ L H
Sbjct: 29 SERVEVVSPLSSWKRVVEGLALLDLGVSPYSGAVFHETPLIIYLF-------------HF 75
Query: 102 L---CSLLFSLADVVSAMLIRATGQTLQMSSCLSLKSL--------DLVELSKNSEMLSS 150
L L+F + D ++A+ + Q K L D+ EL + +
Sbjct: 76 LIDYAELVFMITDALTAIALYFAIQDFNKVVFKKQKLLLELDQYAPDVAELIRTPMEMRY 135
Query: 151 GDIAALVYLWNPFTIVACVGLSTSPIENLVVILSLYGACTRLAPLAAFGWVMGTHLSLYP 210
+ +YL NP+TI++CV ST I N ++ + L+A + T+ SLYP
Sbjct: 136 IPLKVALYLLNPYTILSCVAKSTCAINNTLIAFFILTTIKGSVFLSAVFLALATYQSLYP 195
Query: 211 GVLIIPLILLLGNGPDAPPRKLFLQRRCSKGGKNPSSDSSCQEEELFNQSKLPITFSWKP 270
L P +L L LQR Q + +SK FSW+
Sbjct: 196 VTLFAPGLLYL------------LQR---------------QYIPVKVKSKAFWIFSWE- 227
Query: 271 VIHFLFWASIWSVYVLVLCGISVKQNGGMLEMFKSTYGFILTVEDLSPNIGVLWYFFAEV 330
+A +++ ++V+ +S + + YGFIL+V DL+PNIG+ WYFFAE+
Sbjct: 228 ------YAMMYTGSLVVIVCLSFFLLSSW-DFIPAVYGFILSVPDLTPNIGLFWYFFAEM 280
Query: 331 FEFFRNFFLIVFHMNILVMILPLAIRLNHRPCFLAFVYIAISSMLKSYPSVGDSALYLGL 390
FE F FF+ VF +N+ +PLAI+L P F F+ IAI S+ KSYP+VGD ALY+
Sbjct: 281 FEHFSLFFVCVFQINVFFYTVPLAIKLKEHPIFFMFIQIAIISIFKSYPTVGDVALYMAF 340
Query: 391 LGWFVFELADLQFSFFLFWGCVGVSLLSPVMHNLWIWRGTGNANFYYATAMAFACFQIVL 450
+ L+ F L + SLL PV+ +LWI+ G+ N+NF+YA + F QI+L
Sbjct: 341 FPVWNHLYRFLRNIFVLTCIIIVCSLLFPVLWHLWIYAGSANSNFFYAITLTFNVGQILL 400
Query: 451 VVESVSAILNYDRKLRKLSVTKPVDGKS 478
+ + A L + L DG
Sbjct: 401 ISDYFYAFLRREYYLTHGLYLTAKDGTE 428
>sp|O13883|PIGU_SCHPO GPI transamidase component GAB1 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC1952.01 PE=3 SV=2
Length = 408
Score = 119 bits (297), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 184/427 (43%), Gaps = 78/427 (18%)
Query: 44 RPEVATPVTSIRRLAEGYWLKQSSMSPYAGSMYHGSPLLL------SLIGPLTVKRIEGQ 97
R EV+TPV+ R+ EG +L ++ + PY+G +++ SPLLL L+G ++V R
Sbjct: 35 RIEVSTPVSGFLRVREGLYLYENGLDPYSGGVFYQSPLLLILNYCCELLGGISVTRFVYT 94
Query: 98 PNHLLCSLLFSLADVVSAMLIRATGQTLQMSSCLSLKSLDLVELSKNSEMLSSGDIAALV 157
+ L L A R +S+C L +++
Sbjct: 95 SISTMGGLFVYLI----AKQARVLDPNQVLSTCSPLW-------------------ISVI 131
Query: 158 YLWNPFTIVACVGLSTSPIENLVVILSLYGACTRLAPLAAFGWVMGTHLSLYPGVLIIPL 217
YL NP T + + S I N ++++Y A A + M + + P L++
Sbjct: 132 YLLNPLTFLPGIACSADMILNFTTLMTIYFASC--GSYAIYACCMALTVFINPNALLLFF 189
Query: 218 ILLLGNGPDAPPRKLFLQRRCSKGGKNPSSDSSCQEEELFNQSKLPITFSWKPVIHFLFW 277
P L L R+C+ K F Q
Sbjct: 190 -----------PSYLIL-RKCNSSIK-------------FRQ------------------ 206
Query: 278 ASIWSVYVLVLCGISVKQNGGM--LEMFKSTYGFILTVEDLSPNIGVLWYFFAEVFEFFR 335
I+ V++ L G+ + + L K + L DL+PN+G+ WYFF E+F FR
Sbjct: 207 --IFVVFLFYLAGLIITSGFFLNSLSFLKIPFRVYLDSHDLTPNLGLWWYFFTEMFNEFR 264
Query: 336 NFFLIVFHMNILVMILPLAIRLNHRPCFLAFVYIAISSMLKSYPSVGDSALYLGLLGWFV 395
FFL VF + L+ +LP++IRL + P + I + S+ K+YPS+ D +++L LL F
Sbjct: 265 TFFLFVFAILPLMFVLPVSIRLYYLPLPITIALIGLHSLFKAYPSICDLSIFLSLLPIFN 324
Query: 396 FELADLQFSFFLFWGCVGVSLLSPVMHNLWIWRGTGNANFYYATAMAFACFQIVLVVESV 455
+++S V +L ++ WI G GNANFYYA+ + A + +++ +
Sbjct: 325 KVQDRMRYSLLTNNAIVFALVLGSAFYHSWITLGCGNANFYYASNLILALGLSLKIMDFL 384
Query: 456 SAILNYD 462
A+L D
Sbjct: 385 KALLLVD 391
>sp|P41733|CDC91_YEAST GPI transamidase component GAB1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GAB1 PE=1 SV=1
Length = 394
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 97/179 (54%), Gaps = 18/179 (10%)
Query: 305 STYGFILTVEDLSPNIGVLWYFFAEVFEFFRNFFLIVFHMNILVMILPLAIRLNHRPCFL 364
YG I+T E + PN+G+ WYFF E+F+ F FF VF++ I V I P +R + +P +
Sbjct: 222 QVYGSIITFEKVFPNLGLWWYFFIEMFDTFIPFFKAVFNIFIAVFITPFTLRYHKQPFYA 281
Query: 365 AFVYIAISSMLKSYPSVGDSALYLG-------LLGWFVFELADLQFSFFLFWGCVGVSLL 417
+ I + K YPS+GD+ + L G+ + + S LF + +L
Sbjct: 282 FILCIGWIVLTKPYPSLGDAGFFFSFLPFFTPLFGYLRYPI----ISALLFLHAI---VL 334
Query: 418 SPVMHNLWIWRGTGNANFYYATAMAFACFQIVLVVESVSAIL--NYDRKLR--KLSVTK 472
+P+ ++LW+ G+GN+NF+YA ++ +A ++V+ A+L YD + KL VT+
Sbjct: 335 APIFYHLWVVLGSGNSNFFYAISLVYALAIASILVDLNWAMLRIEYDNGIPNFKLKVTQ 393
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 29/142 (20%)
Query: 46 EVATPVTSIRRLAEGYWLKQSSMSPYAGSMYHGSPLLLSLIGPLTVKRIEGQPNHLLCSL 105
E +TPVTS R L EG +L ++++ Y + H P+L+ + R L SL
Sbjct: 35 EFSTPVTSFRSLQEGIYLLRNNIQVYNHGVVHHPPILIFFLSLFNSDR--------LISL 86
Query: 106 LFSLADVVSAMLIRATGQTLQMSSCLSLKSLDLVELSKNSEMLSSGD-IAALVYLWNPFT 164
+++L D L + L E++K + L + L+Y NP T
Sbjct: 87 IYALID--------------------GLIAYQLTEVTKAFKNLKLKVWLPGLLYAVNPLT 126
Query: 165 IVACVGLSTSPIENLVVILSLY 186
+++C+ S+ N + SLY
Sbjct: 127 LLSCISRSSIIFTNFAISSSLY 148
>sp|Q5AMR5|GPI14_CANAL GPI mannosyltransferase 1 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=GPI14 PE=3 SV=1
Length = 398
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 24/162 (14%)
Query: 68 MSPYAGSMYHGSPLLLSLIGPLTVKRIEGQPNHLLCSLLFSLADVVSAMLIRATGQTLQM 127
+SPY Y +P+L L+ P G+ + LLF ++DV++ ++I Q
Sbjct: 52 LSPYLRETYRYTPILAILLIPDNF----GKYWYHFGKLLFMVSDVITGLIILKLLSKQQ- 106
Query: 128 SSCLSLKSLDLVELSKNSEMLSSGDIAALVYLWNPFTIVACVGLSTSPIENLVVILSLYG 187
+LS+ +M+ S ++L NP I S + ++++LSLY
Sbjct: 107 ------------QLSEKKKMILSS-----IWLLNPMVITISTRGSAESVLTVMIMLSLYY 149
Query: 188 ACTRLAPLAAFGWV-MGTHLSLYPGVLIIPLILLLGNGPDAP 228
+ + + W+ + H +YP ++ +P IL + + P
Sbjct: 150 LLDKDNVILSAIWLGLSIHFKIYP-IIYLPSILYYLSSQETP 190
>sp|Q500W7|PIGM_ARATH GPI mannosyltransferase 1 OS=Arabidopsis thaliana GN=PIGM PE=2 SV=1
Length = 450
Score = 37.4 bits (85), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 81/197 (41%), Gaps = 28/197 (14%)
Query: 63 LKQSSMSPYAGSMYHGSPLLLSLIGPLT-VKRIEGQPNHLLCSLLFSLADVVSAMLIRAT 121
L S SPY + Y SPLL L+ P + R G+ LFS +D++ I
Sbjct: 61 LMASGESPYKRTTYRYSPLLALLLTPNSFFHRSWGK-------FLFSASDLLVGWFIH-- 111
Query: 122 GQTLQMSSCLSLKSLDLVELSKNSEMLSSGDIAALVYLWNPFTIVACVGLSTSPIENLVV 181
+++ K E + + + +V+L+NPFT + PI ++
Sbjct: 112 ---------------KILKQRKVPEKICTYSV--MVWLFNPFTFTIGTRGNCEPIVCAMI 154
Query: 182 ILSLYGACTRLAPLAAFGWVMGTHLSLYPGVLIIPLILLLGNGPDAPPRKLFLQRRCSKG 241
+ + AAF + + H +YP + +P+IL+L +K L +
Sbjct: 155 LWIILCLMQGNLLQAAFWYGLVVHFRVYPIIYALPIILVLDTQVFRSGQKPALLYWNTGQ 214
Query: 242 GKNPSSDSSCQEEELFN 258
K P+S+ ++ LFN
Sbjct: 215 AKTPASNME-RKTFLFN 230
>sp|Q6BHI9|GPI14_DEBHA GPI mannosyltransferase 1 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=GPI14 PE=3 SV=2
Length = 414
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 80/162 (49%), Gaps = 22/162 (13%)
Query: 69 SPYAGSMYHGSPLLLSLIGPLTVKRIEGQPNHLLCSLLFSLADVVSAMLIRATGQTLQMS 128
SPY+ Y +PLL ++ P GQ ++ +F ++D+++ ++I L++
Sbjct: 55 SPYSRETYRYTPLLAWMLIP---NCWGGQWSNF-GKYIFMISDLITGIII------LKLL 104
Query: 129 SCLSLKSLDLVELSKNSE-MLSSGDIAALVYLWNPFTIVACVGLSTSPIENLVVILSLYG 187
S +S+ +LS N MLSS ++L NP I S+ + ++++LSLY
Sbjct: 105 SGISIAG---KKLSTNKIIMLSS------IWLLNPMVITISTRGSSESVLTVMIMLSLYY 155
Query: 188 ACTRLAPLAAFGWV-MGTHLSLYPGVLIIPLILLLGNGPDAP 228
+ + +A+ W+ + H +YP V+ +P I+L + P
Sbjct: 156 LINKKSIIASGFWLGLSIHFKIYP-VIYLPSIMLYLSTSGTP 196
>sp|Q54IA4|PIGM_DICDI GPI mannosyltransferase 1 OS=Dictyostelium discoideum GN=pigm PE=3
SV=1
Length = 442
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 23/159 (14%)
Query: 66 SSMSPYAGSMYHGSPLLLSLIGPLTVKRIEGQPNHLLCSLLFSLADVVSAMLIRATGQTL 125
+ +SPY S Y +PLL L+ P I P LLF + D++ A L++ G L
Sbjct: 71 NGLSPYDRSTYRYTPLLAYLLVP----NILIHPA--FGKLLFVICDMIIAYLLK--GILL 122
Query: 126 QMSSCLSLKSLDLVELSKNSEMLSSGDIAALVYLWNPFTIVACVGLSTSPIENLVVILSL 185
+ ++ ++L L+ L+ +L NPF+I + + +V+ S
Sbjct: 123 ERFPKITSRTL-LICLAS--------------WLLNPFSINVSTRGNAESVIGAMVLASF 167
Query: 186 YGACTRLAPLAAFGWVMGTHLSLYPGVLIIPLILLLGNG 224
Y + LA+ + + H +YP + IP+ L +
Sbjct: 168 YFLTKKNLTLASIFYGLSVHFKIYPIIYSIPMYLYIDEN 206
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.139 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 170,775,340
Number of Sequences: 539616
Number of extensions: 6844686
Number of successful extensions: 18467
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 18427
Number of HSP's gapped (non-prelim): 32
length of query: 478
length of database: 191,569,459
effective HSP length: 121
effective length of query: 357
effective length of database: 126,275,923
effective search space: 45080504511
effective search space used: 45080504511
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)