Query 011762
Match_columns 478
No_of_seqs 373 out of 3038
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 14:48:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011762.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011762hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3n_A Kelch-like protein 11; 100.0 2.4E-48 8.1E-53 380.3 13.4 253 44-307 9-272 (279)
2 3hve_A Gigaxonin; ubiquitin, c 100.0 1.1E-46 3.7E-51 363.9 8.2 241 44-297 8-255 (256)
3 3htm_A Speckle-type POZ protei 100.0 5.2E-29 1.8E-33 225.3 10.0 152 51-211 18-171 (172)
4 3hqi_A Speckle-type POZ protei 99.9 2.2E-26 7.4E-31 228.1 10.4 151 52-211 159-311 (312)
5 4eoz_A Speckle-type POZ protei 99.9 2.6E-26 9E-31 201.5 4.0 134 51-192 9-144 (145)
6 2if5_A Zinc finger and BTB dom 99.9 5E-25 1.7E-29 187.1 7.7 115 46-163 4-120 (120)
7 1r29_A B-cell lymphoma 6 prote 99.9 9.6E-25 3.3E-29 187.3 8.7 118 43-164 5-125 (127)
8 2ppi_A Gigaxonin; BTB domain, 99.9 1.7E-24 5.7E-29 189.9 8.9 117 44-163 24-144 (144)
9 2z8h_A Transcription regulator 99.9 1E-24 3.5E-29 190.0 7.4 124 43-171 12-137 (138)
10 3b84_A Zinc finger and BTB dom 99.9 1.2E-24 4.1E-29 184.6 5.2 110 48-164 5-116 (119)
11 2yy9_A Zinc finger and BTB dom 99.9 1.9E-24 6.7E-29 187.4 6.3 115 47-169 5-121 (135)
12 2vkp_A BTB/POZ domain-containi 99.9 2.2E-23 7.6E-28 173.7 9.9 101 60-164 1-107 (109)
13 3ohu_A Transcription regulator 99.9 1.6E-24 5.5E-29 185.4 2.9 114 44-162 9-125 (125)
14 2vpk_A Myoneurin; transcriptio 99.9 7.4E-24 2.5E-28 178.8 6.7 111 49-164 4-116 (116)
15 1buo_A POZ domain, protein (pr 99.9 8.1E-24 2.8E-28 180.0 7.0 112 45-164 6-119 (121)
16 2ihc_A Transcription regulator 99.9 3.1E-24 1.1E-28 183.4 2.3 115 45-163 7-123 (124)
17 2q81_A MIZ-1 protein; BTB/POZ 99.9 4.8E-24 1.7E-28 180.8 1.7 111 45-163 5-117 (119)
18 3ga1_A Nucleus accumbens-assoc 99.9 2E-23 6.7E-28 179.6 2.8 114 45-164 11-126 (129)
19 3m5b_A Zinc finger and BTB dom 99.9 1.3E-22 4.5E-27 171.7 6.9 109 42-164 7-117 (119)
20 3fkc_A Transcriptional regulat 99.8 1.2E-21 4E-26 165.3 6.8 105 44-156 8-115 (116)
21 2eqx_A Kelch repeat and BTB do 99.8 5.8E-19 2E-23 145.8 6.0 96 162-270 4-99 (105)
22 2ast_A S-phase kinase-associat 99.5 6.7E-14 2.3E-18 124.2 9.6 108 70-181 3-143 (159)
23 2xn4_A Kelch-like protein 2; s 99.3 2.2E-12 7.4E-17 125.9 10.4 116 327-467 16-164 (302)
24 3ii7_A Kelch-like protein 7; p 99.3 3E-12 1E-16 125.1 10.9 122 322-468 6-159 (306)
25 2vpj_A Kelch-like protein 12; 99.3 5.7E-12 1.9E-16 122.8 9.8 126 315-467 4-168 (301)
26 4asc_A Kelch repeat and BTB do 99.3 8.4E-12 2.9E-16 122.6 9.7 109 336-469 117-254 (315)
27 4asc_A Kelch repeat and BTB do 99.3 1.2E-11 4.1E-16 121.5 9.8 106 337-467 68-205 (315)
28 4ajy_C Transcription elongatio 99.3 1.1E-11 3.9E-16 100.2 7.9 78 70-151 4-97 (97)
29 3ii7_A Kelch-like protein 7; p 99.2 2E-11 6.8E-16 119.3 11.0 117 327-468 56-210 (306)
30 2woz_A Kelch repeat and BTB do 99.2 1.3E-11 4.6E-16 121.4 9.1 109 336-469 127-264 (318)
31 1zgk_A Kelch-like ECH-associat 99.2 1.8E-11 6.2E-16 119.9 9.7 107 336-467 90-224 (308)
32 1zgk_A Kelch-like ECH-associat 99.2 2.6E-11 9E-16 118.8 10.4 116 327-467 122-271 (308)
33 2xn4_A Kelch-like protein 2; s 99.2 2.1E-11 7.3E-16 118.8 9.7 116 327-467 62-213 (302)
34 2zwa_A Leucine carboxyl methyl 99.2 1.6E-12 5.6E-17 141.9 0.8 189 245-467 315-559 (695)
35 2vpj_A Kelch-like protein 12; 99.2 4.2E-11 1.4E-15 116.6 10.7 116 327-467 113-262 (301)
36 2woz_A Kelch repeat and BTB do 99.2 5.3E-11 1.8E-15 117.1 11.0 116 327-467 16-167 (318)
37 1fs1_B SKP1, cyclin A/CDK2-ass 99.1 1.4E-10 4.8E-15 100.4 6.1 94 70-172 4-126 (141)
38 2uvk_A YJHT; unknown function, 99.0 3.4E-10 1.2E-14 113.0 9.3 116 327-467 20-209 (357)
39 2p1m_A SKP1-like protein 1A; F 99.0 4.7E-11 1.6E-15 105.7 1.8 104 70-181 6-142 (160)
40 2uvk_A YJHT; unknown function, 99.0 1.1E-09 3.8E-14 109.2 9.5 108 336-468 168-326 (357)
41 2zwa_A Leucine carboxyl methyl 98.7 1.1E-08 3.7E-13 111.7 8.3 111 335-468 467-617 (695)
42 1k3i_A Galactose oxidase precu 98.5 1.2E-07 4.1E-12 102.7 7.5 89 336-434 219-341 (656)
43 1hv2_A Elongin C, ELC1; protei 98.4 4.2E-07 1.4E-11 73.3 7.5 77 70-151 6-99 (99)
44 2fnj_C Transcription elongatio 98.4 5.3E-07 1.8E-11 72.3 6.3 78 70-151 3-96 (96)
45 1k3i_A Galactose oxidase precu 98.3 5.8E-07 2E-11 97.3 7.7 111 334-467 367-530 (656)
46 3v7d_A Suppressor of kinetocho 98.3 2.2E-06 7.6E-11 76.1 9.7 107 69-179 8-148 (169)
47 3drz_A BTB/POZ domain-containi 98.3 3.2E-06 1.1E-10 69.2 8.7 93 69-164 7-106 (107)
48 1vcb_B Protein (elongin C); tu 97.8 2.8E-05 9.4E-10 64.0 5.7 79 69-151 18-112 (112)
49 3drx_A BTB/POZ domain-containi 97.3 0.00036 1.2E-08 62.9 7.1 93 69-164 13-112 (202)
50 3kvt_A Potassium channel prote 96.2 0.0022 7.6E-08 52.7 2.5 84 69-155 6-93 (115)
51 1s1g_A Potassium voltage-gated 95.7 0.0097 3.3E-07 49.6 4.6 84 69-158 14-104 (124)
52 1nn7_A Potassium channel KV4.2 95.0 0.0062 2.1E-07 49.2 1.0 79 70-154 2-86 (105)
53 2nz0_B Potassium voltage-gated 94.9 0.014 4.9E-07 49.6 3.0 81 68-154 35-121 (140)
54 1t1d_A Protein (potassium chan 94.5 0.023 7.7E-07 45.4 3.1 83 70-155 3-90 (100)
55 3i3n_A Kelch-like protein 11; 77.8 10 0.00035 35.4 9.6 94 133-230 139-250 (279)
56 2eqx_A Kelch repeat and BTB do 72.3 3.2 0.00011 32.8 3.8 32 132-164 7-38 (105)
57 2r9r_B Paddle chimera voltage 64.0 5.6 0.00019 41.1 4.5 84 69-155 53-141 (514)
58 2vkp_A BTB/POZ domain-containi 56.1 6.6 0.00023 30.7 2.7 33 166-202 76-108 (109)
59 3htm_A Speckle-type POZ protei 55.3 8.5 0.00029 32.8 3.5 33 133-167 132-164 (172)
60 3hve_A Gigaxonin; ubiquitin, c 54.8 5 0.00017 37.0 2.0 31 133-164 131-161 (256)
61 3hqi_A Speckle-type POZ protei 44.6 14 0.00049 34.9 3.5 33 133-167 272-304 (312)
62 1r29_A B-cell lymphoma 6 prote 40.1 18 0.00061 29.1 3.0 33 166-202 94-126 (127)
63 2yy9_A Zinc finger and BTB dom 35.8 11 0.00037 31.0 1.0 38 166-207 86-123 (135)
64 1buo_A POZ domain, protein (pr 31.1 38 0.0013 26.9 3.5 33 166-202 88-120 (121)
65 2vpk_A Myoneurin; transcriptio 30.8 26 0.0009 27.5 2.5 31 166-200 85-115 (116)
66 2q81_A MIZ-1 protein; BTB/POZ 30.1 32 0.0011 27.3 2.9 31 166-200 87-117 (119)
67 3b84_A Zinc finger and BTB dom 29.8 18 0.00062 28.8 1.3 33 166-202 85-117 (119)
68 2z8h_A Transcription regulator 29.4 13 0.00044 30.6 0.3 35 166-204 100-134 (138)
69 2ast_A S-phase kinase-associat 27.4 1.8E+02 0.0062 24.2 7.4 55 156-227 86-140 (159)
70 2if5_A Zinc finger and BTB dom 25.9 48 0.0017 26.0 3.3 30 166-199 90-119 (120)
71 3mbr_X Glutamine cyclotransfer 24.6 2.9E+02 0.0098 25.0 8.6 93 327-430 31-140 (243)
72 1pd7_B MAD1; PAH2, SIN3, eukar 21.0 34 0.0012 19.5 0.9 14 137-150 3-16 (26)
No 1
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=100.00 E-value=2.4e-48 Score=380.27 Aligned_cols=253 Identities=20% Similarity=0.316 Sum_probs=231.2
Q ss_pred ccCCCccccchhhhcccCCCCCCCccEEEEEe-----eEEeehhhhhcCCHHHHHhhcCCCCCCCCceEEEec----CCC
Q 011762 44 DVGLNLKQCGEEATGNIDPAWSMDLSTVLRVK-----TVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRI----HAS 114 (478)
Q Consensus 44 ~~~~~~~~~~~l~~l~~~~~~~~~~DV~l~v~-----~f~aHr~vLaa~S~yF~~mf~~~~~es~~~~i~l~~----~~v 114 (478)
.+..+.|+..+++.++.+++++.+|||+|.++ .|+|||.|||++|+||++||+++++|+.+.+|.|+. +++
T Consensus 9 ~~~~~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v 88 (279)
T 3i3n_A 9 DFECSSHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGP 88 (279)
T ss_dssp EEECTTHHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCS
T ss_pred CcCCHhHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCC
Confidence 35567899999999999999999999999995 499999999999999999999999999999999862 279
Q ss_pred cHHHHHHHHHHHccCceecCccchHHHHHHHHhhcchhhHHHHHHHhhhcCCCCHHhHHHHHhccchhhhhhchHHHHHH
Q 011762 115 EEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDT 194 (478)
Q Consensus 115 ~~~~f~~lL~fiYtg~i~i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~~~~l~~~n~l~i~~~A~~~~~~~~~~~L~~~ 194 (478)
++++|+.+|+|+|||++.++. +++.+++.+|++|+++.|++.|++||.+ .++++||+.++.+|..+ ++..|.+.
T Consensus 89 ~~~~f~~ll~~~Ytg~~~i~~-~~v~~ll~~A~~l~i~~L~~~c~~~L~~-~l~~~n~~~i~~~A~~~----~~~~L~~~ 162 (279)
T 3i3n_A 89 EPDTVEAVIEYMYTGRIRVST-GSVHEVLELADRFLLIRLKEFCGEFLKK-KLHLSNCVAIHSLAHMY----TLSQLALK 162 (279)
T ss_dssp CHHHHHHHHHHHHHSEEEEET-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-HCCTTTHHHHHHHHHHT----TCHHHHHH
T ss_pred CHHHHHHHHHhhCcCCcccCH-HHHHHHHHHHHHHCcHHHHHHHHHHHHH-cCCcchHHHHHHHHHHc----CcHHHHHH
Confidence 999999999999999999997 8999999999999999999999999999 89999999999999865 89999999
Q ss_pred HHHHHHHcHHHHhccchhhhcCCHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHhcccCcCCCCC
Q 011762 195 AKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMT 274 (478)
Q Consensus 195 ~~~fI~~nf~~v~~~s~~fl~L~~~~l~~lL~~d~L~v~sE~~vf~av~~Wl~~~~~~~~~r~~~~~~~Ll~~VRf~~ls 274 (478)
|.+||.+||.++.. +++|.+||.+.+..+|++|+|+|.+|.+||+++++|++++ +++|++++ ++||++||||+|+
T Consensus 163 ~~~~i~~~f~~v~~-~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~---~~~r~~~~-~~ll~~VRf~l~~ 237 (279)
T 3i3n_A 163 AADMIRRNFHKVIQ-DEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRN---AEERERYF-EELFKLLRLSQMK 237 (279)
T ss_dssp HHHHHHHTHHHHTT-SSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTT---HHHHTTTH-HHHHTTSCGGGSC
T ss_pred HHHHHHHHHHHHhc-CcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcC---HHHHHHHH-HHHHHhcCCCCCC
Confidence 99999999999999 9999999999999999999999999999999999999999 88999998 8999999999999
Q ss_pred HHHHHhhcccCCCC--chHHHHHHHHHHhhhcCcc
Q 011762 275 CRKLKKVLTCNDFD--PELASKVVLESLFFKAETP 307 (478)
Q Consensus 275 ~~~L~~~~~~~~l~--~~~c~~~l~ea~~~~~~~~ 307 (478)
+++|.+.+++++++ ++.|++++.+|++||..|.
T Consensus 238 ~~~L~~~v~~~~l~~~~~~c~~~l~ea~~~~~~~~ 272 (279)
T 3i3n_A 238 PTYLTRHVKPERLVANNEVCVKLVADAVERHALRA 272 (279)
T ss_dssp HHHHHHTTTTSHHHHTCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhhccchhcCCHHHHHHHHHHHHhccCch
Confidence 99999999988775 4789999999999999753
No 2
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=100.00 E-value=1.1e-46 Score=363.91 Aligned_cols=241 Identities=17% Similarity=0.256 Sum_probs=201.3
Q ss_pred ccCCCccccchhhhcccCCCCCCCccEEEEEe--eEEeehhhhhcCCHHHHHhhcCCCC--CCCCceEEEecCCCcHHHH
Q 011762 44 DVGLNLKQCGEEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKLFSNGMR--ESEQRYVTLRIHASEEAAL 119 (478)
Q Consensus 44 ~~~~~~~~~~~l~~l~~~~~~~~~~DV~l~v~--~f~aHr~vLaa~S~yF~~mf~~~~~--es~~~~i~l~~~~v~~~~f 119 (478)
.+.+..|+..++..++++++++.+|||+|.++ .|+|||.|||++|+||++||++++. |+...+|.++ ++++++|
T Consensus 8 ~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~--~v~~~~f 85 (256)
T 3hve_A 8 AVSDPQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELE--GISVMVM 85 (256)
T ss_dssp --CCTTTHHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECS--SCCHHHH
T ss_pred ccCChHHHHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeC--CCCHHHH
Confidence 35567899999999999999999999999994 6999999999999999999999887 6677788887 9999999
Q ss_pred HHHHHHHccCceecCccchHHHHHHHHhhcchhhHHHHHHHhhhcCCCCHHhHHHHHhccchhhhhhchHHHHHHHHHHH
Q 011762 120 MELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFL 199 (478)
Q Consensus 120 ~~lL~fiYtg~i~i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~~~~l~~~n~l~i~~~A~~~~~~~~~~~L~~~~~~fI 199 (478)
+.+++|+|||++.++. +++.+++.+|++|+++.|++.|++||.+ .++++||+.++.+|..+ ++.+|.+.|.+||
T Consensus 86 ~~ll~~~Yt~~~~i~~-~~v~~ll~~A~~l~i~~l~~~c~~~L~~-~l~~~n~~~i~~~A~~~----~~~~L~~~~~~~i 159 (256)
T 3hve_A 86 REILDYIFSGQIRLNE-DTIQDVVQAADLLLLTDLKTLCCEFLEG-CIAAENCIGIRDFALHY----CLHHVHYLATEYL 159 (256)
T ss_dssp HHHHHHHHHSCCCCC--CCHHHHHHHHHHHTCHHHHHHHHHHHHH-TCCSSTTHHHHHHHHHT----TCHHHHHHHHHHH
T ss_pred HHHHhhccCCCCcccH-hHHHHHHHHHHHHChHHHHHHHHHHHHh-hCCHhhHHHHHHHHHHc----CcHHHHHHHHHHH
Confidence 9999999999999997 9999999999999999999999999999 89999999999999865 9999999999999
Q ss_pred HHcHHHHhccchhhhcCCHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhcCCChHHHHHHHHHHhcccCcCCCCCHHHHH
Q 011762 200 AARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLK 279 (478)
Q Consensus 200 ~~nf~~v~~~s~~fl~L~~~~l~~lL~~d~L~v~sE~~vf~av~~Wl~~~~~~~~~r~~~~~~~Ll~~VRf~~ls~~~L~ 279 (478)
.+||.++.. +++|.+||.+.+..+|++|+|+|.+|.+||+++++|++|+ +++|++++ ++||++||||+|++++|.
T Consensus 160 ~~~f~~v~~-~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~---~~~R~~~~-~~ll~~VRf~~l~~~~l~ 234 (256)
T 3hve_A 160 ETHFRDVSS-TEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHD---TEIRKVHM-KDVMSALWVSGLDSSYLR 234 (256)
T ss_dssp HHHHHHHTT-CHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC-----CCSTTTH-HHHHHHHHHHTTCC-CHH
T ss_pred HHHHHHHhC-CcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcC---HHHHHHHH-HHHHHhCCCCCCCHHHHH
Confidence 999999999 9999999999999999999999999999999999999999 78899998 899999999999999999
Q ss_pred hhcccCCCCc---hHHHHHHH
Q 011762 280 KVLTCNDFDP---ELASKVVL 297 (478)
Q Consensus 280 ~~~~~~~l~~---~~c~~~l~ 297 (478)
+.+++++++. +.|++++.
T Consensus 235 ~~v~~~~l~~~~~~~c~~ll~ 255 (256)
T 3hve_A 235 EQMLNEPLVREIVKECSNIPL 255 (256)
T ss_dssp HHHHTSTTHHHHHCC------
T ss_pred HHHhcChHHHhhHHHHHHHhh
Confidence 9999998873 35888765
No 3
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.95 E-value=5.2e-29 Score=225.27 Aligned_cols=152 Identities=24% Similarity=0.296 Sum_probs=138.4
Q ss_pred ccchhhhcccCCCCCCCccEEEEE--eeEEeehhhhhcCCHHHHHhhcCCCCCCCCceEEEecCCCcHHHHHHHHHHHcc
Q 011762 51 QCGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYS 128 (478)
Q Consensus 51 ~~~~l~~l~~~~~~~~~~DV~l~v--~~f~aHr~vLaa~S~yF~~mf~~~~~es~~~~i~l~~~~v~~~~f~~lL~fiYt 128 (478)
.+.+...++.+++++.+|||+|.+ +.|+|||.||+++|+||++||.++++|+....|.++ ++++++|+.+|+|+||
T Consensus 18 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~--~~~~~~f~~~l~~~Yt 95 (172)
T 3htm_A 18 ECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEIN--DVEPEVFKEMMCFIYT 95 (172)
T ss_dssp CCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEEC--SSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEec--CCCHHHHHHHHHHHhC
Confidence 457888899999999999999999 469999999999999999999999999999999998 9999999999999999
Q ss_pred CceecCccchHHHHHHHHhhcchhhHHHHHHHhhhcCCCCHHhHHHHHhccchhhhhhchHHHHHHHHHHHHHcHHHHhc
Q 011762 129 STLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISK 208 (478)
Q Consensus 129 g~i~i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~~~~l~~~n~l~i~~~A~~~~~~~~~~~L~~~~~~fI~~nf~~v~~ 208 (478)
|++.++. +++.+++.+|++|+++.|++.|+++|.+ .++++||+.++.+|..+ ++.+|.+.|.+||.+||.++.+
T Consensus 96 ~~~~~~~-~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~l~~~n~~~~~~~A~~~----~~~~L~~~~~~~i~~~~~~v~~ 169 (172)
T 3htm_A 96 GKAPNLD-KMADDLLAAADKYALERLKVMCEDALCS-NLSVENAAEILILADLH----SADQLKTQAVDFINYHATDVLE 169 (172)
T ss_dssp SCCTTGG-GTHHHHHHHHHHTTCHHHHHHHHHHHHH-TCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHTC-----
T ss_pred CCCCCcH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHh----CcHHHHHHHHHHHHHHHHHHHc
Confidence 9999987 8999999999999999999999999999 89999999999999865 8999999999999999999987
Q ss_pred cch
Q 011762 209 FQE 211 (478)
Q Consensus 209 ~s~ 211 (478)
++
T Consensus 170 -s~ 171 (172)
T 3htm_A 170 -TS 171 (172)
T ss_dssp ---
T ss_pred -CC
Confidence 54
No 4
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.93 E-value=2.2e-26 Score=228.14 Aligned_cols=151 Identities=24% Similarity=0.294 Sum_probs=132.3
Q ss_pred cchhhhcccCCCCCCCccEEEEE--eeEEeehhhhhcCCHHHHHhhcCCCCCCCCceEEEecCCCcHHHHHHHHHHHccC
Q 011762 52 CGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSS 129 (478)
Q Consensus 52 ~~~l~~l~~~~~~~~~~DV~l~v--~~f~aHr~vLaa~S~yF~~mf~~~~~es~~~~i~l~~~~v~~~~f~~lL~fiYtg 129 (478)
+.+.+.+++++.++.+|||+|.+ +.|+|||.|||++|+||++||.++++|+...+|.|+ ++++++|+.+|+|+|||
T Consensus 159 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~--~~~~~~f~~~L~~iYt~ 236 (312)
T 3hqi_A 159 CRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEIN--DVEPEVFKEMMCFIYTG 236 (312)
T ss_dssp CCHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEEC--SSCHHHHHHHHHHHHHS
T ss_pred chHHHHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEec--CCCHHHHHHHHHhhcCC
Confidence 46777888999999999999999 469999999999999999999999999999999998 99999999999999999
Q ss_pred ceecCccchHHHHHHHHhhcchhhHHHHHHHhhhcCCCCHHhHHHHHhccchhhhhhchHHHHHHHHHHHHHcHHHHhcc
Q 011762 130 TLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKF 209 (478)
Q Consensus 130 ~i~i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~~~~l~~~n~l~i~~~A~~~~~~~~~~~L~~~~~~fI~~nf~~v~~~ 209 (478)
++.++. +++.+||.+|++|+++.|++.|+++|.+ .++.+||+.++.+|..+ ++.+|+++|.+||..||.++++
T Consensus 237 ~~~~~~-~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~~~~~n~~~~l~~A~~~----~~~~L~~~~~~~i~~~~~~v~~- 309 (312)
T 3hqi_A 237 KAPNLD-KMADDLLAAADKYALERLKVMCEDALCS-NLSVENAAEILILADLH----SADQLKTQAVDFINYHATDVLE- 309 (312)
T ss_dssp CCTTHH-HHHHHHHHHHHHTTCHHHHHHHHHHHHT-TCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHTC------
T ss_pred CCCChH-HHHHHHHHHHHHhCHHHHHHHHHHHHHc-cCCHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHHHHhh-
Confidence 999887 8999999999999999999999999999 89999999999999865 9999999999999999999987
Q ss_pred ch
Q 011762 210 QE 211 (478)
Q Consensus 210 s~ 211 (478)
++
T Consensus 310 s~ 311 (312)
T 3hqi_A 310 TS 311 (312)
T ss_dssp --
T ss_pred CC
Confidence 54
No 5
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.92 E-value=2.6e-26 Score=201.52 Aligned_cols=134 Identities=25% Similarity=0.300 Sum_probs=102.1
Q ss_pred ccchhhhcccCCCCCCCccEEEEE--eeEEeehhhhhcCCHHHHHhhcCCCCCCCCceEEEecCCCcHHHHHHHHHHHcc
Q 011762 51 QCGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYS 128 (478)
Q Consensus 51 ~~~~l~~l~~~~~~~~~~DV~l~v--~~f~aHr~vLaa~S~yF~~mf~~~~~es~~~~i~l~~~~v~~~~f~~lL~fiYt 128 (478)
.+.+...++.+++++.+|||+|.+ +.|+|||.||+++|+||++||.+++.|+....|.++ ++++++|+.+|+|+||
T Consensus 9 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~--~~~~~~~~~~l~~~Y~ 86 (145)
T 4eoz_A 9 ECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEIN--DVEPEVFKEMMCFIYT 86 (145)
T ss_dssp CCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEEC--SSCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEec--CCCHHHHHHHHHhhcc
Confidence 347788899999999999999999 469999999999999999999999998888899998 9999999999999999
Q ss_pred CceecCccchHHHHHHHHhhcchhhHHHHHHHhhhcCCCCHHhHHHHHhccchhhhhhchHHHH
Q 011762 129 STLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLT 192 (478)
Q Consensus 129 g~i~i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~~~~l~~~n~l~i~~~A~~~~~~~~~~~L~ 192 (478)
|++.++. +++.+++.+|++|+++.|++.|+++|.+ .++++||+.++.+|..| ++.+|+
T Consensus 87 ~~~~~~~-~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~l~~~n~~~~l~~A~~~----~~~~Lk 144 (145)
T 4eoz_A 87 GKAPNLD-KMADDLLAAADKYALERLKVMCEDALCS-NLSVENAAEILILADLH----SADQLK 144 (145)
T ss_dssp SCCTTGG-GTHHHHHHHHHHTTCHHHHHHHHCC-------------------------------
T ss_pred CccCCcH-HHHHHHHHHHHHhCHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHh----CHHHhc
Confidence 9999987 8999999999999999999999999999 89999999999999865 777665
No 6
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.91 E-value=5e-25 Score=187.14 Aligned_cols=115 Identities=25% Similarity=0.339 Sum_probs=104.0
Q ss_pred CCCccccchhhhcccCCCCCCCccEEEEE--eeEEeehhhhhcCCHHHHHhhcCCCCCCCCceEEEecCCCcHHHHHHHH
Q 011762 46 GLNLKQCGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELL 123 (478)
Q Consensus 46 ~~~~~~~~~l~~l~~~~~~~~~~DV~l~v--~~f~aHr~vLaa~S~yF~~mf~~~~~es~~~~i~l~~~~v~~~~f~~lL 123 (478)
....|++.++..++++++++.+|||+|.+ +.|+|||.|||++|+||++||.+++.|+....|.++ ++++++|+.+|
T Consensus 4 ~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~--~~~~~~f~~ll 81 (120)
T 2if5_A 4 PFPDHSSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEID--FVSAEALTALM 81 (120)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECC--SSCHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeC--CCCHHHHHHHH
Confidence 34578899999999999999999999999 469999999999999999999999999999999998 99999999999
Q ss_pred HHHccCceecCccchHHHHHHHHhhcchhhHHHHHHHhhh
Q 011762 124 NFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR 163 (478)
Q Consensus 124 ~fiYtg~i~i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~ 163 (478)
+|+|||++.++. +++.+++.+|++|+++.|++.|++||.
T Consensus 82 ~~~Yt~~~~~~~-~~~~~ll~~A~~~~i~~L~~~C~~~L~ 120 (120)
T 2if5_A 82 DFAYTATLTVST-ANVGDILSAARLLEIPAVSHVCADLLD 120 (120)
T ss_dssp HHHHHSCCCCCG-GGHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHcCCCCccCH-HHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 999999999997 899999999999999999999999984
No 7
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.91 E-value=9.6e-25 Score=187.32 Aligned_cols=118 Identities=17% Similarity=0.312 Sum_probs=110.4
Q ss_pred CccCCCccccchhhhcccCCCCCCCccEEEEE--eeEEeehhhhhcCCHHHHHhhcCCCCCCCCceEEE-ecCCCcHHHH
Q 011762 43 ADVGLNLKQCGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTL-RIHASEEAAL 119 (478)
Q Consensus 43 ~~~~~~~~~~~~l~~l~~~~~~~~~~DV~l~v--~~f~aHr~vLaa~S~yF~~mf~~~~~es~~~~i~l-~~~~v~~~~f 119 (478)
..+....|.+.++..++++++++.+|||+|.+ +.|+|||.|||++|+||++||.+++.| ....|.| + ++++++|
T Consensus 5 ~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~--~~~~~~f 81 (127)
T 1r29_A 5 SQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDP--EINPEGF 81 (127)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCT--TSCHHHH
T ss_pred ccccchhHHHHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCC--CCCHHHH
Confidence 34566788999999999999999999999999 469999999999999999999999998 7788999 6 9999999
Q ss_pred HHHHHHHccCceecCccchHHHHHHHHhhcchhhHHHHHHHhhhc
Q 011762 120 MELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 164 (478)
Q Consensus 120 ~~lL~fiYtg~i~i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~~ 164 (478)
+.+|+|+|||++.++. +++.+++.+|++|+++.|++.|++||.+
T Consensus 82 ~~ll~~~Ytg~~~~~~-~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 125 (127)
T 1r29_A 82 NILLDFMYTSRLNLRE-GNIMAVMATAMYLQMEHVVDTCRKFIKA 125 (127)
T ss_dssp HHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCcCcCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 9999999999999997 8999999999999999999999999986
No 8
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.90 E-value=1.7e-24 Score=189.91 Aligned_cols=117 Identities=17% Similarity=0.200 Sum_probs=104.3
Q ss_pred ccCCCccccchhhhcccCCCCCCCccEEEEEe--eEEeehhhhhcCCHHHHHhhcCCCCC--CCCceEEEecCCCcHHHH
Q 011762 44 DVGLNLKQCGEEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKLFSNGMRE--SEQRYVTLRIHASEEAAL 119 (478)
Q Consensus 44 ~~~~~~~~~~~l~~l~~~~~~~~~~DV~l~v~--~f~aHr~vLaa~S~yF~~mf~~~~~e--s~~~~i~l~~~~v~~~~f 119 (478)
.+..+.|...++..++++++++.+|||+|.++ .|+|||.|||++|+||++||.+++.| +....|.|+ ++++++|
T Consensus 24 ~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~--~v~~~~f 101 (144)
T 2ppi_A 24 AVSDPQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELE--GISVMVM 101 (144)
T ss_dssp CCCCTTHHHHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECC--SSCHHHH
T ss_pred eecCcchHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeC--CCCHHHH
Confidence 36677899999999999999999999999994 69999999999999999999998876 567788887 9999999
Q ss_pred HHHHHHHccCceecCccchHHHHHHHHhhcchhhHHHHHHHhhh
Q 011762 120 MELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR 163 (478)
Q Consensus 120 ~~lL~fiYtg~i~i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~ 163 (478)
+.+|+|+|||++.++. +++.+++.+|++|+++.|++.|++||+
T Consensus 102 ~~lL~fiYtg~~~i~~-~~v~~ll~~A~~l~i~~L~~~C~~~L~ 144 (144)
T 2ppi_A 102 REILDYIFSGQIRLNE-DTIQDVVQAADLLLLTDLKTLCCEFLE 144 (144)
T ss_dssp HHHHHHHTTSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred HHHHHHHhCCCCCCCH-HHHHHHHHHHHHhCcHHHHHHHHHHhC
Confidence 9999999999999997 999999999999999999999999984
No 9
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.90 E-value=1e-24 Score=189.96 Aligned_cols=124 Identities=15% Similarity=0.130 Sum_probs=112.8
Q ss_pred CccCCCccccchhhhcccCCCCCCCccEEEEEe--eEEeehhhhhcCCHHHHHhhcCCCCCCCCceEEEecCCCcHHHHH
Q 011762 43 ADVGLNLKQCGEEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALM 120 (478)
Q Consensus 43 ~~~~~~~~~~~~l~~l~~~~~~~~~~DV~l~v~--~f~aHr~vLaa~S~yF~~mf~~~~~es~~~~i~l~~~~v~~~~f~ 120 (478)
..+....|...++..++++++++.+|||+|.++ .|+|||.|||++|+||++||.+++.|+ ..|.++ .++++++|+
T Consensus 12 ~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~--~~i~l~-~~v~~~~~~ 88 (138)
T 2z8h_A 12 FAYESSVHSTNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDAE--LTVTLP-EEVTVKGFE 88 (138)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCTT--EEEECC-TTSCHHHHH
T ss_pred eEecCCchHHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCCC--ceEEeC-CCCCHHHHH
Confidence 345667899999999999999999999999994 699999999999999999999988763 467773 389999999
Q ss_pred HHHHHHccCceecCccchHHHHHHHHhhcchhhHHHHHHHhhhcCCCCHHh
Q 011762 121 ELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCES 171 (478)
Q Consensus 121 ~lL~fiYtg~i~i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~~~~l~~~n 171 (478)
.+|+|+|||++.++. +++.+++.+|++|+++.|++.|++||.+ +++.+|
T Consensus 89 ~lL~~~Ytg~~~i~~-~~v~~ll~~A~~~~i~~L~~~C~~~l~~-~l~~sn 137 (138)
T 2z8h_A 89 PLIQFAYTAKLILSK-DNVDEVCRCVEFLSVHNIEESCFQFLKF-KFLDST 137 (138)
T ss_dssp HHHHHHHHSCCCCCT-TTHHHHHHHHHHHTCGGGHHHHHHHTTC-CCSCCC
T ss_pred HHHHHhcCCCcccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHH-hccccc
Confidence 999999999999997 9999999999999999999999999999 888776
No 10
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.90 E-value=1.2e-24 Score=184.56 Aligned_cols=110 Identities=23% Similarity=0.253 Sum_probs=101.9
Q ss_pred CccccchhhhcccCCCCCCCccEEEEEe--eEEeehhhhhcCCHHHHHhhcCCCCCCCCceEEEecCCCcHHHHHHHHHH
Q 011762 48 NLKQCGEEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNF 125 (478)
Q Consensus 48 ~~~~~~~l~~l~~~~~~~~~~DV~l~v~--~f~aHr~vLaa~S~yF~~mf~~~~~es~~~~i~l~~~~v~~~~f~~lL~f 125 (478)
..|+..++..++++++++.+|||+|.++ .|+|||.|||++|+||++||.+++ +..|.|+ ++++++|+.+|+|
T Consensus 5 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~----~~~i~l~--~~~~~~f~~ll~~ 78 (119)
T 3b84_A 5 VQHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS----GGSVVLP--AGFAEIFGLLLDF 78 (119)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT----CCCEEEC--GGGHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC----CCeEEeC--CCCHHHHHHHHHH
Confidence 4678899999999999999999999994 699999999999999999999876 5678998 9999999999999
Q ss_pred HccCceecCccchHHHHHHHHhhcchhhHHHHHHHhhhc
Q 011762 126 MYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 164 (478)
Q Consensus 126 iYtg~i~i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~~ 164 (478)
+|||++.++. +++.+++.+|++|+++.|++.|++||.+
T Consensus 79 iYtg~~~~~~-~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 79 FYTGHLALTS-GNRDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp HHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred HcCCCCccCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 9999999997 8999999999999999999999999986
No 11
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.90 E-value=1.9e-24 Score=187.42 Aligned_cols=115 Identities=21% Similarity=0.235 Sum_probs=99.8
Q ss_pred CCccccchhhhcccCCCCCCCccEEEEE--eeEEeehhhhhcCCHHHHHhhcCCCCCCCCceEEEecCCCcHHHHHHHHH
Q 011762 47 LNLKQCGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLN 124 (478)
Q Consensus 47 ~~~~~~~~l~~l~~~~~~~~~~DV~l~v--~~f~aHr~vLaa~S~yF~~mf~~~~~es~~~~i~l~~~~v~~~~f~~lL~ 124 (478)
...|...++..++++++++.+|||+|.+ +.|+|||.|||++|+||++||.+++ +..|.|+ ++++++|+.+|+
T Consensus 5 ~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~----~~~i~l~--~~~~~~f~~lL~ 78 (135)
T 2yy9_A 5 SSGHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT----GGSVVLP--AGFAEIFGLLLD 78 (135)
T ss_dssp --CHHHHHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC--------CCEEEC--GGGHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC----CCeEEeC--CCCHHHHHHHHH
Confidence 3568889999999999999999999999 4699999999999999999999876 4578998 899999999999
Q ss_pred HHccCceecCccchHHHHHHHHhhcchhhHHHHHHHhhhcCCCCH
Q 011762 125 FMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTC 169 (478)
Q Consensus 125 fiYtg~i~i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~~~~l~~ 169 (478)
|||||++.++. +++.+++.+|++|+++.|++.|++||.+ .+..
T Consensus 79 fiYtg~~~i~~-~~v~~ll~~A~~l~i~~L~~~C~~~l~~-~l~~ 121 (135)
T 2yy9_A 79 FFYTGHLALTS-GNRDQVLLAAKELRVPEAVELCQSFQPQ-TSVG 121 (135)
T ss_dssp HHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHCCC------
T ss_pred HHhCCCCCCCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH-hccC
Confidence 99999999997 9999999999999999999999999998 5643
No 12
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.89 E-value=2.2e-23 Score=173.74 Aligned_cols=101 Identities=26% Similarity=0.370 Sum_probs=90.0
Q ss_pred cCCCCCCCccEEEEE-e-----eEEeehhhhhcCCHHHHHhhcCCCCCCCCceEEEecCCCcHHHHHHHHHHHccCceec
Q 011762 60 IDPAWSMDLSTVLRV-K-----TVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLST 133 (478)
Q Consensus 60 ~~~~~~~~~DV~l~v-~-----~f~aHr~vLaa~S~yF~~mf~~~~~es~~~~i~l~~~~v~~~~f~~lL~fiYtg~i~i 133 (478)
++++++.+|||+|.+ + .|+|||.|||++|+||++||.+++.|+. ..|.++ ++++++|+.+|+|+|||++.+
T Consensus 1 ~l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~--~~~~~~f~~~l~~iYt~~~~~ 77 (109)
T 2vkp_A 1 SMFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIP--DVEPAAFLILLKYMYSDEIDL 77 (109)
T ss_dssp CCTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEET--TSCHHHHHHHHHHHHHCCCCC
T ss_pred CcccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeC--CCCHHHHHHHHHHHcCCCccC
Confidence 467899999999999 3 5999999999999999999999999988 889998 999999999999999999999
Q ss_pred CccchHHHHHHHHhhcchhhHHHHHHHhhhc
Q 011762 134 TTPTALLDVLMAADKFEVASCMRYCSRLLRN 164 (478)
Q Consensus 134 ~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~~ 164 (478)
+. +++.+++.+|++|+++.|++.|++||.+
T Consensus 78 ~~-~~~~~ll~~A~~~~~~~L~~~c~~~l~~ 107 (109)
T 2vkp_A 78 EA-DTVLATLYAAKKYIVPALAKACVNFLET 107 (109)
T ss_dssp CT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CH-HHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 97 9999999999999999999999999986
No 13
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.89 E-value=1.6e-24 Score=185.42 Aligned_cols=114 Identities=18% Similarity=0.196 Sum_probs=105.9
Q ss_pred ccCCCccccchhhhcccCCCCCCCccEEEEE--eeEEeehhhhhcCCHHHHHhhcCCCCCCCCceEEEecCC-CcHHHHH
Q 011762 44 DVGLNLKQCGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHA-SEEAALM 120 (478)
Q Consensus 44 ~~~~~~~~~~~l~~l~~~~~~~~~~DV~l~v--~~f~aHr~vLaa~S~yF~~mf~~~~~es~~~~i~l~~~~-v~~~~f~ 120 (478)
.+....|...+++.++++++++.+|||+|.+ +.|+|||.|||++|+||++||.+++.| ...|.++ + +++++|+
T Consensus 9 ~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~--~~~~~~~f~ 84 (125)
T 3ohu_A 9 VYESTVHCTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN--DLVVSLP--EEVTARGFG 84 (125)
T ss_dssp EEECSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS--SCEEECC--TTCCHHHHH
T ss_pred eeecHHHHHHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC--CcEEEeC--CCCCHHHHH
Confidence 3566789999999999999999999999999 469999999999999999999998876 5678887 7 9999999
Q ss_pred HHHHHHccCceecCccchHHHHHHHHhhcchhhHHHHHHHhh
Q 011762 121 ELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLL 162 (478)
Q Consensus 121 ~lL~fiYtg~i~i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L 162 (478)
.+|+|+|||++.++. +++.+++.+|++|+++.|++.|++||
T Consensus 85 ~~l~~iYtg~~~~~~-~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 85 PLLQFAYTAKLLLSR-ENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp HHHHHHTTSEEEECT-TTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred HHHHhHcCCceEECH-HHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 999999999999998 99999999999999999999999886
No 14
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.89 E-value=7.4e-24 Score=178.79 Aligned_cols=111 Identities=16% Similarity=0.207 Sum_probs=101.8
Q ss_pred ccccchhhhcccCCCCCCCccEEEEEe--eEEeehhhhhcCCHHHHHhhcCCCCCCCCceEEEecCCCcHHHHHHHHHHH
Q 011762 49 LKQCGEEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFM 126 (478)
Q Consensus 49 ~~~~~~l~~l~~~~~~~~~~DV~l~v~--~f~aHr~vLaa~S~yF~~mf~~~~~es~~~~i~l~~~~v~~~~f~~lL~fi 126 (478)
.|+..++..++++++++.+|||+|.++ .|+|||.|||++|+||++||.++ .+..|.|+.+++++++|+.+|+|+
T Consensus 4 ~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~~i~l~~~~~~~~~f~~ll~~~ 79 (116)
T 2vpk_A 4 HHCEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST----SENNVFLDQSQVKADGFQKLLEFI 79 (116)
T ss_dssp HHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC----CCSCEECCTTTCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC----CCCeEEeecCCCCHHHHHHHHHHH
Confidence 578889999999999999999999994 69999999999999999999986 356777765589999999999999
Q ss_pred ccCceecCccchHHHHHHHHhhcchhhHHHHHHHhhhc
Q 011762 127 YSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 164 (478)
Q Consensus 127 Ytg~i~i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~~ 164 (478)
|||++.++. +++.+++.+|++|+++.|++.|++||.+
T Consensus 80 Yt~~~~~~~-~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (116)
T 2vpk_A 80 YTGTLNLDS-WNVKEIHQAADYLKVEEVVTKCKIKMED 116 (116)
T ss_dssp HHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred cCCCcccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999997 8999999999999999999999999863
No 15
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.89 E-value=8.1e-24 Score=179.98 Aligned_cols=112 Identities=22% Similarity=0.286 Sum_probs=104.1
Q ss_pred cCCCccccchhhhcccCCCCCCCccEEEEEe--eEEeehhhhhcCCHHHHHhhcCCCCCCCCceEEEecCCCcHHHHHHH
Q 011762 45 VGLNLKQCGEEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMEL 122 (478)
Q Consensus 45 ~~~~~~~~~~l~~l~~~~~~~~~~DV~l~v~--~f~aHr~vLaa~S~yF~~mf~~~~~es~~~~i~l~~~~v~~~~f~~l 122 (478)
+..+.|++.++..++++++++.+|||+|.++ .|+|||.|||++|+||++||.++ ..+|.++ ++++++|+.+
T Consensus 6 ~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~--~~~~~~f~~l 78 (121)
T 1buo_A 6 LQNPSHPTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN-----SQHYTLD--FLSPKTFQQI 78 (121)
T ss_dssp CCCTTHHHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC-----CSEEEEC--SSCHHHHHHH
T ss_pred ccCcchHHHHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC-----CcEEEeC--CCCHHHHHHH
Confidence 4556788999999999999999999999994 69999999999999999999874 4578888 9999999999
Q ss_pred HHHHccCceecCccchHHHHHHHHhhcchhhHHHHHHHhhhc
Q 011762 123 LNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 164 (478)
Q Consensus 123 L~fiYtg~i~i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~~ 164 (478)
|+|+|||++.++. +++.+++.+|++|+++.|++.|++||.+
T Consensus 79 l~~~Ytg~~~~~~-~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 119 (121)
T 1buo_A 79 LEYAYTATLQAKA-EDLDDLLYAAEILEIEYLEEQCLKMLET 119 (121)
T ss_dssp HHHHHHSCCCCCG-GGHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHhhcCCCcCCCH-HHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 9999999999997 9999999999999999999999999976
No 16
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.88 E-value=3.1e-24 Score=183.37 Aligned_cols=115 Identities=15% Similarity=0.160 Sum_probs=102.0
Q ss_pred cCCCccccchhhhcccCCCCCCCccEEEEEe--eEEeehhhhhcCCHHHHHhhcCCCCCCCCceEEEecCCCcHHHHHHH
Q 011762 45 VGLNLKQCGEEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMEL 122 (478)
Q Consensus 45 ~~~~~~~~~~l~~l~~~~~~~~~~DV~l~v~--~f~aHr~vLaa~S~yF~~mf~~~~~es~~~~i~l~~~~v~~~~f~~l 122 (478)
+..+.|.+.++..++++++++.+|||+|.++ .|+|||.|||++|+||++||.+++.|+ ..|.++ .++++++|+.+
T Consensus 7 ~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~--~~i~l~-~~v~~~~f~~l 83 (124)
T 2ihc_A 7 YESSVHSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGE--LNITLP-EEVTVKGFEPL 83 (124)
T ss_dssp EECSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---C--EEEECC-TTSCHHHHHHH
T ss_pred ecCcchHHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCC--ceEeec-CCcCHHHHHHH
Confidence 4456788899999999999999999999994 699999999999999999999988764 467773 38999999999
Q ss_pred HHHHccCceecCccchHHHHHHHHhhcchhhHHHHHHHhhh
Q 011762 123 LNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR 163 (478)
Q Consensus 123 L~fiYtg~i~i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~ 163 (478)
|+|+|||++.++. +++.+++.+|++|+++.|++.|++||+
T Consensus 84 L~~iYtg~~~i~~-~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 84 IQFAYTAKLILSK-ENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HHHHHHSEEEEET-TTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred HHHhcCCCcccCH-HHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 9999999999997 899999999999999999999999985
No 17
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.88 E-value=4.8e-24 Score=180.81 Aligned_cols=111 Identities=23% Similarity=0.283 Sum_probs=101.2
Q ss_pred cCCCccccchhhhcccCCCCCCCccEEEEEe--eEEeehhhhhcCCHHHHHhhcCCCCCCCCceEEEecCCCcHHHHHHH
Q 011762 45 VGLNLKQCGEEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMEL 122 (478)
Q Consensus 45 ~~~~~~~~~~l~~l~~~~~~~~~~DV~l~v~--~f~aHr~vLaa~S~yF~~mf~~~~~es~~~~i~l~~~~v~~~~f~~l 122 (478)
.....|++.++..++++++++.+|||+|.++ .|+|||.|||++|+||++||.++ ...|.++ ++++++|+.+
T Consensus 5 ~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~--~~~~~~f~~l 77 (119)
T 2q81_A 5 SDFPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ-----KDVVHLD--ISNAAGLGQV 77 (119)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC-----CSGGGGG--GCCHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeC--CCCHHHHHHH
Confidence 3445788999999999999999999999994 69999999999999999999873 3456666 8999999999
Q ss_pred HHHHccCceecCccchHHHHHHHHhhcchhhHHHHHHHhhh
Q 011762 123 LNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR 163 (478)
Q Consensus 123 L~fiYtg~i~i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~ 163 (478)
|+|+|||++.++. +++.+++.+|++|+++.|++.|++||.
T Consensus 78 l~~~Ytg~~~i~~-~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 78 LEFMYTAKLSLSP-ENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp HHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHcCCCCccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9999999999997 899999999999999999999999986
No 18
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.87 E-value=2e-23 Score=179.64 Aligned_cols=114 Identities=18% Similarity=0.204 Sum_probs=98.3
Q ss_pred cCCCccccchhhhcccCCCCCCCccEEEEE--eeEEeehhhhhcCCHHHHHhhcCCCCCCCCceEEEecCCCcHHHHHHH
Q 011762 45 VGLNLKQCGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMEL 122 (478)
Q Consensus 45 ~~~~~~~~~~l~~l~~~~~~~~~~DV~l~v--~~f~aHr~vLaa~S~yF~~mf~~~~~es~~~~i~l~~~~v~~~~f~~l 122 (478)
+..+.|...++..++++++++.+|||+|.+ +.|+|||.|||++|+||++||.++ ....|.|+ .++++++|+.+
T Consensus 11 ~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~----~~~~i~l~-~~~~~~~f~~l 85 (129)
T 3ga1_A 11 MEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS----RSAVVELP-AAVQPQSFQQI 85 (129)
T ss_dssp EECTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC----CCSEEECC-TTCCHHHHHHH
T ss_pred eecCcHHHHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC----CCCEEEEC-CCCCHHHHHHH
Confidence 455678899999999999999999999999 469999999999999999999986 45678873 27999999999
Q ss_pred HHHHccCceecCccchHHHHHHHHhhcchhhHHHHHHHhhhc
Q 011762 123 LNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 164 (478)
Q Consensus 123 L~fiYtg~i~i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~~ 164 (478)
|+|+|||++.++. +++.+++.+|++|+++.|++.|++||.+
T Consensus 86 l~~iYtg~~~i~~-~~~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 86 LSFCYTGRLSMNV-GDQDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp HHHHHHSEEECCT-TTHHHHHHHHHHTTBTTSSCC-------
T ss_pred HHHHhCCccccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999999999998 9999999999999999999999999987
No 19
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.86 E-value=1.3e-22 Score=171.73 Aligned_cols=109 Identities=17% Similarity=0.155 Sum_probs=94.6
Q ss_pred CCccCCCccccchhhhcccCCCCCCCccEEEEE--eeEEeehhhhhcCCHHHHHhhcCCCCCCCCceEEEecCCCcHHHH
Q 011762 42 PADVGLNLKQCGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAAL 119 (478)
Q Consensus 42 p~~~~~~~~~~~~l~~l~~~~~~~~~~DV~l~v--~~f~aHr~vLaa~S~yF~~mf~~~~~es~~~~i~l~~~~v~~~~f 119 (478)
|.......|++.+++.++ |.++.+|||+|.+ +.|+|||+|||++|+||++ .+..|.++ ++++++|
T Consensus 7 p~~~~~~~~~~~~l~~l~--r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~---------~~~~i~l~--~v~~~~f 73 (119)
T 3m5b_A 7 PIRLPSPYGSDRLVQLAA--RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR---------RGQWALGE--GISPSTF 73 (119)
T ss_dssp CEEECCTTTTCHHHHHHH--HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC---------CEEEECCS--SCCHHHH
T ss_pred CCCCCCCcchHHHHHHHH--HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc---------CCCEEEeC--CCCHHHH
Confidence 444455567788888886 6678999999999 4699999999999999974 34567777 9999999
Q ss_pred HHHHHHHccCceecCccchHHHHHHHHhhcchhhHHHHHHHhhhc
Q 011762 120 MELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 164 (478)
Q Consensus 120 ~~lL~fiYtg~i~i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~~ 164 (478)
+.+|+|+|||++.++. +++.+++.+|++|+++.|++.|++++++
T Consensus 74 ~~ll~fiYtg~~~i~~-~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 74 AQLLNFVYGESVELQP-GELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp HHHHHHHTTCCEEECG-GGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred HHHHHHHcCCCcCcCH-HHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 9999999999999998 9999999999999999999999999876
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.84 E-value=1.2e-21 Score=165.27 Aligned_cols=105 Identities=19% Similarity=0.205 Sum_probs=96.3
Q ss_pred ccCCCccccchhhhcccCCCCCCCccEEEEE--eeEEeehhhhhcCCHHHHHhhcCCCCCCCCceEEEecCCCcHHHHHH
Q 011762 44 DVGLNLKQCGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALME 121 (478)
Q Consensus 44 ~~~~~~~~~~~l~~l~~~~~~~~~~DV~l~v--~~f~aHr~vLaa~S~yF~~mf~~~~~es~~~~i~l~~~~v~~~~f~~ 121 (478)
.+..+.|...++..++++++++.+|||+|.+ +.|+|||.|||++|+||++||.++ +..|.++ ++++++|+.
T Consensus 8 ~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~-----~~~i~l~--~~~~~~f~~ 80 (116)
T 3fkc_A 8 SATDIQYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA-----GQVVELS--FIRAEIFAE 80 (116)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC-----CSEEEEC--SSCHHHHHH
T ss_pred eecCccHHHHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeC--CCCHHHHHH
Confidence 3556778999999999999999999999999 469999999999999999999875 5678888 999999999
Q ss_pred HHHHHccCce-ecCccchHHHHHHHHhhcchhhHHH
Q 011762 122 LLNFMYSSTL-STTTPTALLDVLMAADKFEVASCMR 156 (478)
Q Consensus 122 lL~fiYtg~i-~i~~~~~v~~lL~aA~~l~i~~L~~ 156 (478)
+|+|+|||++ .++. +++.+++.+|++|+++.|++
T Consensus 81 ~l~~~Ytg~~~~~~~-~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 81 ILNYIYSSKIVRVRS-DLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp HHHHHTTSCCCSCCH-HHHHHHHHHHHHHTCHHHHT
T ss_pred HHHhhcCCCcCCCCH-HHHHHHHHHHHHhCccccCc
Confidence 9999999999 7887 99999999999999999874
No 21
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=5.8e-19 Score=145.77 Aligned_cols=96 Identities=16% Similarity=0.202 Sum_probs=90.7
Q ss_pred hhcCCCCHHhHHHHHhccchhhhhhchHHHHHHHHHHHHHcHHHHhccchhhhcCCHHHHHHhhcCCCCCCCCHHHHHHH
Q 011762 162 LRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDF 241 (478)
Q Consensus 162 L~~~~l~~~n~l~i~~~A~~~~~~~~~~~L~~~~~~fI~~nf~~v~~~s~~fl~L~~~~l~~lL~~d~L~v~sE~~vf~a 241 (478)
+.+ +++++||+.++.+|+.| ++.+|.++|.+||.+||.++.+ +++|++||.+.|..+|++| +.+|.+||+|
T Consensus 4 ~~~-~L~~~NCl~i~~~A~~~----~~~~L~~~a~~fi~~nF~~v~~-~~eFl~L~~~~L~~lL~sd---v~~E~~vf~a 74 (105)
T 2eqx_A 4 GSS-GVQVGNCLQVMWLADRH----SDPELYTAAKHCAKTHLAQLQN-TEEFLHLPHRLLTDIISDG---VPCSQNPTEA 74 (105)
T ss_dssp CCC-CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHTCHHHHT-SHHHHHSCHHHHHHHHHTC---EETTSCHHHH
T ss_pred hhc-cCCHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHHHh-cccHhhCCHHHHHHHHcCC---CCCHHHHHHH
Confidence 455 79999999999999865 9999999999999999999999 9999999999999999998 7899999999
Q ss_pred HHHHHHhcCCChHHHHHHHHHHhcccCcC
Q 011762 242 ALKWARTHYPKLEERREILGSRLGRLIRF 270 (478)
Q Consensus 242 v~~Wl~~~~~~~~~r~~~~~~~Ll~~VRf 270 (478)
+++|++|| +++|.+++ ++||++||+
T Consensus 75 v~~Wv~~d---~~~R~~~~-~~Ll~~VR~ 99 (105)
T 2eqx_A 75 IEAWINFN---KEEREAFA-ESLRTSLKE 99 (105)
T ss_dssp HHHHHHTT---HHHHHHHH-HHHHHHCCE
T ss_pred HHHHHHcC---HHHHHHHH-HHHHHHHHH
Confidence 99999999 88999998 899999996
No 22
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.49 E-value=6.7e-14 Score=124.15 Aligned_cols=108 Identities=17% Similarity=0.284 Sum_probs=88.9
Q ss_pred EEEEE---eeEEeehhhhhcCCHHHHHhhcC-CCC-CCCCceEEEecCCCcHHHHHHHHHHHccCc--------------
Q 011762 70 TVLRV---KTVHISSPILAAKSPFFYKLFSN-GMR-ESEQRYVTLRIHASEEAALMELLNFMYSST-------------- 130 (478)
Q Consensus 70 V~l~v---~~f~aHr~vLaa~S~yF~~mf~~-~~~-es~~~~i~l~~~~v~~~~f~~lL~fiYtg~-------------- 130 (478)
|+|.. +.|.+||.+ |+.|+||++||.+ ++. |+.+..|.|+ ++++.+|+.|++|+|+++
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~--~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~ 79 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLP--NVNAAILKKVIQWCTHHKDDPPPPEDDENKEK 79 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECT--TSCHHHHHHHHHHHHHTTTCCC----------
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCC--CccHHHHHHHHHHHHHcCcCCCCccccccccc
Confidence 66665 359999999 8999999999998 777 7777788888 999999999999999988
Q ss_pred ------------eecCccchHHHHHHHHhhcchhhHHHHHHHhhhcC--CCCHHhHHHHHhccch
Q 011762 131 ------------LSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNL--PMTCESALLYLDLPSS 181 (478)
Q Consensus 131 ------------i~i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~~~--~l~~~n~l~i~~~A~~ 181 (478)
+.++. +++.+|+.||++|++..|.++|++++..+ ..+++.+-.++.+...
T Consensus 80 ~~~~i~~wD~~F~~id~-~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d 143 (159)
T 2ast_A 80 RTDDIPVWDQEFLKVDQ-GTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKND 143 (159)
T ss_dssp -CCCCCHHHHHHTCSCH-HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCC
T ss_pred chhhhhHHHHHHHcCCH-HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCC
Confidence 77776 89999999999999999999999999652 4577777777766543
No 23
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.35 E-value=2.2e-12 Score=125.94 Aligned_cols=116 Identities=16% Similarity=0.093 Sum_probs=91.8
Q ss_pred eeEeeecc-----cceEEEecCCCCeEEE---ccccccceeeeecCCeeeeccceeccc-cc---------cccccee--
Q 011762 327 ERAYKYRP-----VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQ-GF---------FLSAHCN-- 386 (478)
Q Consensus 327 ~~i~~~~~-----~~~v~~y~p~~~~W~~---l~~~r~~~~~~~~~~~iY~~~~v~GG~-~~---------~~~~~~~-- 386 (478)
+.||+.|+ .+.+.+||+.+++|.. +|.+|..|++++++++|| ++||. +. ......|
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~ly----v~GG~~~~~~~~~~~~~d~~~~~W~~ 91 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVF----AVGGFNGSLRVRTVDSYDPVKDQWTS 91 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEE----EESCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEE----EEeCcCCCccccceEEECCCCCceee
Confidence 56777554 3789999999999998 788899999999999999 99996 21 1223345
Q ss_pred ---eccCCceeEEEEEeceec----c---CCcceeeeceeeeeecC---CcceeccCCCceeeeccccccccccCCCCCc
Q 011762 387 ---MDQQSSFHCFGLFLGMQE----K---GSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFGIPWT 453 (478)
Q Consensus 387 ---m~~~R~~~~~~~l~g~l~----~---~~~~s~v~~~~~E~Ydp---~W~~v~~m~~~~~~~~~~~~~~~~~~~~~~~ 453 (478)
|+.+|..|++++++|+|+ . ..+++ | |+||| +|+.+++||.++..++++++
T Consensus 92 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~-~-----~~~d~~~~~W~~~~~~p~~r~~~~~~~~----------- 154 (302)
T 2xn4_A 92 VANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSS-V-----EAYNIKSNEWFHVAPMNTRRSSVGVGVV----------- 154 (302)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEE-E-----EEEETTTTEEEEECCCSSCCBSCEEEEE-----------
T ss_pred CCCCCccccceEEEEECCEEEEEcCCCCCccCce-E-----EEEeCCCCeEeecCCCCCcccCceEEEE-----------
Confidence 999999999999999992 1 12333 5 99999 99999999999987776555
Q ss_pred eeeecCCcceecce
Q 011762 454 AFMADDSIYFINGN 467 (478)
Q Consensus 454 ~~~~~~~~~~~~~~ 467 (478)
++.||++||.
T Consensus 155 ----~~~iyv~GG~ 164 (302)
T 2xn4_A 155 ----GGLLYAVGGY 164 (302)
T ss_dssp ----TTEEEEECCE
T ss_pred ----CCEEEEEeCC
Confidence 4567778775
No 24
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.34 E-value=3e-12 Score=125.14 Aligned_cols=122 Identities=15% Similarity=0.074 Sum_probs=93.7
Q ss_pred ccccc-eeEeeecc---cceEEEecCCCCeEEE---ccccccceeeeecCCeeeeccceecccc---------cccccce
Q 011762 322 YRRFV-ERAYKYRP---VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG---------FFLSAHC 385 (478)
Q Consensus 322 pr~~~-~~i~~~~~---~~~v~~y~p~~~~W~~---l~~~r~~~~~~~~~~~iY~~~~v~GG~~---------~~~~~~~ 385 (478)
||+.. +.||+.|+ .+.+..|||.+++|.. +|.+|..|++++++++|| ++||.. +......
T Consensus 6 pr~~~~~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~ly----v~GG~~~~~~~~~~~~d~~~~~ 81 (306)
T 3ii7_A 6 PRRKKHDYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVY----ILGGSQLFPIKRMDCYNVVKDS 81 (306)
T ss_dssp ----CCCEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEE----EECCBSSSBCCEEEEEETTTTE
T ss_pred CCccccceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEE----EEeCCCCCCcceEEEEeCCCCe
Confidence 45433 56777554 5799999999999998 788899999999999999 999963 1223344
Q ss_pred e-----eccCCceeEEEEEeceec--cC------CcceeeeceeeeeecC---CcceeccCCCceeeeccccccccccCC
Q 011762 386 N-----MDQQSSFHCFGLFLGMQE--KG------SVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFG 449 (478)
Q Consensus 386 ~-----m~~~R~~~~~~~l~g~l~--~~------~~~s~v~~~~~E~Ydp---~W~~v~~m~~~~~~~~~~~~~~~~~~~ 449 (478)
| |..+|..|++++++|+|+ .| .+.. + ++||| +|+.+++||.++..++++.+
T Consensus 82 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~-~-----~~~d~~~~~W~~~~~~p~~r~~~~~~~~------- 148 (306)
T 3ii7_A 82 WYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYL-F-----ECYDTRTESWHTKPSMLTQRCSHGMVEA------- 148 (306)
T ss_dssp EEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCC-E-----EEEETTTTEEEEECCCSSCCBSCEEEEE-------
T ss_pred EEECCCCCccccceeEEEECCEEEEECCCCCCCcEeee-E-----EEEeCCCCceEeCCCCcCCcceeEEEEE-------
Confidence 5 899999999999999992 11 2233 5 99999 89999999999987776555
Q ss_pred CCCceeeecCCcceeccee
Q 011762 450 IPWTAFMADDSIYFINGNL 468 (478)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~ 468 (478)
++.||++||..
T Consensus 149 --------~~~iyv~GG~~ 159 (306)
T 3ii7_A 149 --------NGLIYVCGGSL 159 (306)
T ss_dssp --------TTEEEEECCEE
T ss_pred --------CCEEEEECCCC
Confidence 55788888853
No 25
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.29 E-value=5.7e-12 Score=122.79 Aligned_cols=126 Identities=21% Similarity=0.181 Sum_probs=90.9
Q ss_pred hhhhhccccccc-eeEeeecc-------cceEEEecCCCCeEEE---ccccccceeeeecCCeeeeccceeccc-c----
Q 011762 315 AEEANSTYRRFV-ERAYKYRP-------VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQ-G---- 378 (478)
Q Consensus 315 ~~~~~~~pr~~~-~~i~~~~~-------~~~v~~y~p~~~~W~~---l~~~r~~~~~~~~~~~iY~~~~v~GG~-~---- 378 (478)
+++++ ||... +.+|+.|+ .+.+.+|||.+++|.. +|.+|..|+++++++.|| ++||. +
T Consensus 4 ~~~~~--pr~~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~----v~GG~~~~~~~ 77 (301)
T 2vpj_A 4 GPRTR--ARLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIY----VIGGYDGRSRL 77 (301)
T ss_dssp -----------CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE----EECCBCSSCBC
T ss_pred Ccccc--ccccCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEE----EEcCCCCCccC
Confidence 34444 56433 56776555 3689999999999998 778899999999999999 99996 1
Q ss_pred -----cccccce---e-----eccCCceeEEEEEeceec--cC-----CcceeeeceeeeeecC---CcceeccCCCcee
Q 011762 379 -----FFLSAHC---N-----MDQQSSFHCFGLFLGMQE--KG-----SVSFAVDYEFAARIKP---TEEYVSKYKGNYT 435 (478)
Q Consensus 379 -----~~~~~~~---~-----m~~~R~~~~~~~l~g~l~--~~-----~~~s~v~~~~~E~Ydp---~W~~v~~m~~~~~ 435 (478)
+...... | |+.+|..|++++++|+|+ .| .++. + |+||| +|+.+++||.++.
T Consensus 78 ~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~-~-----~~~d~~~~~W~~~~~~p~~r~ 151 (301)
T 2vpj_A 78 SSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTS-M-----ERYDPNIDQWSMLGDMQTARE 151 (301)
T ss_dssp CCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCE-E-----EEEETTTTEEEEEEECSSCCB
T ss_pred ceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccce-E-----EEEcCCCCeEEECCCCCCCcc
Confidence 1122344 6 899999999999999992 11 2334 5 99999 9999999999998
Q ss_pred eeccccccccccCCCCCceeeecCCcceecce
Q 011762 436 FTGGKAVGYRNLFGIPWTAFMADDSIYFINGN 467 (478)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (478)
.++++.+ ++.||++||.
T Consensus 152 ~~~~~~~---------------~~~iyv~GG~ 168 (301)
T 2vpj_A 152 GAGLVVA---------------SGVIYCLGGY 168 (301)
T ss_dssp SCEEEEE---------------TTEEEEECCB
T ss_pred cceEEEE---------------CCEEEEECCC
Confidence 7766555 4556777764
No 26
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.27 E-value=8.4e-12 Score=122.65 Aligned_cols=109 Identities=13% Similarity=-0.057 Sum_probs=88.6
Q ss_pred ceEEEecCCCCeEEE---ccccccceeeeecCCeeeeccceeccc--cc---------cccccee-----eccCCceeEE
Q 011762 336 KVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQ--GF---------FLSAHCN-----MDQQSSFHCF 396 (478)
Q Consensus 336 ~~v~~y~p~~~~W~~---l~~~r~~~~~~~~~~~iY~~~~v~GG~--~~---------~~~~~~~-----m~~~R~~~~~ 396 (478)
+.+++|||.+++|.. +|.+|..|++++++++|| ++||. +. ......| |+.+|..|++
T Consensus 117 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 192 (315)
T 4asc_A 117 DSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVY----VIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGA 192 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE----EECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEE
T ss_pred ceEEEECCCCCcEeECCCCCCcccceeEEEECCEEE----EEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEE
Confidence 679999999999998 788999999999999999 99997 11 1223445 9999999999
Q ss_pred EEEecee----cc---CCcceeeeceeeeeecC---CcceeccCCCceeeeccccccccccCCCCCceeeecCCcceecc
Q 011762 397 GLFLGMQ----EK---GSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFING 466 (478)
Q Consensus 397 ~~l~g~l----~~---~~~~s~v~~~~~E~Ydp---~W~~v~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (478)
++++|+| |. +.+.. + ++||| +|+.+++||.++..++++++ ++.||++||
T Consensus 193 ~~~~~~iyv~GG~~~~~~~~~-~-----~~yd~~~~~W~~~~~~p~~r~~~~~~~~---------------~~~l~v~GG 251 (315)
T 4asc_A 193 TVHDGRIIVAAGVTDTGLTSS-A-----EVYSITDNKWAPFEAFPQERSSLSLVSL---------------VGTLYAIGG 251 (315)
T ss_dssp EEETTEEEEEEEECSSSEEEE-E-----EEEETTTTEEEEECCCSSCCBSCEEEEE---------------TTEEEEEEE
T ss_pred EEECCEEEEEeccCCCCccce-E-----EEEECCCCeEEECCCCCCcccceeEEEE---------------CCEEEEECC
Confidence 9999999 21 12334 5 99999 99999999999997776665 567889998
Q ss_pred eee
Q 011762 467 NLH 469 (478)
Q Consensus 467 ~~~ 469 (478)
...
T Consensus 252 ~~~ 254 (315)
T 4asc_A 252 FAT 254 (315)
T ss_dssp EEE
T ss_pred ccc
Confidence 743
No 27
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.26 E-value=1.2e-11 Score=121.55 Aligned_cols=106 Identities=12% Similarity=-0.030 Sum_probs=84.8
Q ss_pred eEEEecCCCCeEEE---ccccccceeeeecCCeeeeccceecccc----cccc---------ccee-----eccCCceeE
Q 011762 337 VVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG----FFLS---------AHCN-----MDQQSSFHC 395 (478)
Q Consensus 337 ~v~~y~p~~~~W~~---l~~~r~~~~~~~~~~~iY~~~~v~GG~~----~~~~---------~~~~-----m~~~R~~~~ 395 (478)
.+.+|||.+++|.. +|.+|..|++++++++|| ++||.. .... ...| |+.+|..|+
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~ly----v~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 143 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIY----VVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHT 143 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSCEESCEEEEETTEEE----EECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCE
T ss_pred ceEEecCCCCeEEECCCCCcchhceeEEEECCEEE----EEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCccccee
Confidence 48899999999998 788999999999999999 999952 1222 2344 899999999
Q ss_pred EEEEeceec--cC-----C-cceeeeceeeeeecC---CcceeccCCCceeeeccccccccccCCCCCceeeecCCccee
Q 011762 396 FGLFLGMQE--KG-----S-VSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFI 464 (478)
Q Consensus 396 ~~~l~g~l~--~~-----~-~~s~v~~~~~E~Ydp---~W~~v~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (478)
+++++|+|+ .| . +.. | |+||| +|+.+++||.++..++++++ ++.||++
T Consensus 144 ~~~~~~~iyv~GG~~~~~~~~~~-~-----~~yd~~~~~W~~~~~~p~~r~~~~~~~~---------------~~~iyv~ 202 (315)
T 4asc_A 144 VLSHMDLVYVIGGKGSDRKCLNK-M-----CVYDPKKFEWKELAPMQTARSLFGATVH---------------DGRIIVA 202 (315)
T ss_dssp EEEETTEEEEECCBCTTSCBCCC-E-----EEEETTTTEEEECCCCSSCCBSCEEEEE---------------TTEEEEE
T ss_pred EEEECCEEEEEeCCCCCCcccce-E-----EEEeCCCCeEEECCCCCCchhceEEEEE---------------CCEEEEE
Confidence 999999992 11 1 233 5 99999 99999999999988776655 4567777
Q ss_pred cce
Q 011762 465 NGN 467 (478)
Q Consensus 465 ~~~ 467 (478)
||.
T Consensus 203 GG~ 205 (315)
T 4asc_A 203 AGV 205 (315)
T ss_dssp EEE
T ss_pred ecc
Confidence 775
No 28
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.25 E-value=1.1e-11 Score=100.25 Aligned_cols=78 Identities=18% Similarity=0.227 Sum_probs=62.6
Q ss_pred EEEEE---eeEEeehhhhhcCCHHHHHhhcC--CCCCCCCceEEEecCCCcHHHHHHHHHHHc-----c---Ccee---c
Q 011762 70 TVLRV---KTVHISSPILAAKSPFFYKLFSN--GMRESEQRYVTLRIHASEEAALMELLNFMY-----S---STLS---T 133 (478)
Q Consensus 70 V~l~v---~~f~aHr~vLaa~S~yF~~mf~~--~~~es~~~~i~l~~~~v~~~~f~~lL~fiY-----t---g~i~---i 133 (478)
|+|+. +.|.+||.+ |+.|+||++||.+ ++.|+....|.|+ ++++.+++.+++|+| + +++. +
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~--~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i 80 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFR--EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPI 80 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECT--TSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECC--CCCHHHHHHHHHHHHHhcccCCCcCCCCcCcC
Confidence 45555 369999999 9999999999987 6778778889988 999999999999999 5 6777 8
Q ss_pred CccchHHHHHHHHhhcch
Q 011762 134 TTPTALLDVLMAADKFEV 151 (478)
Q Consensus 134 ~~~~~v~~lL~aA~~l~i 151 (478)
+. +++.+|+.||++|+.
T Consensus 81 ~~-~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 81 AP-EIALELLMAANFLDC 97 (97)
T ss_dssp CG-GGHHHHHHHHHHHTC
T ss_pred CH-HHHHHHHHHHhhhCC
Confidence 87 899999999999973
No 29
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.25 E-value=2e-11 Score=119.30 Aligned_cols=117 Identities=17% Similarity=0.089 Sum_probs=91.7
Q ss_pred eeEeeecc-----cceEEEecCCCCeEEE---ccccccceeeeecCCeeeeccceecccc--cc---------ccccee-
Q 011762 327 ERAYKYRP-----VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG--FF---------LSAHCN- 386 (478)
Q Consensus 327 ~~i~~~~~-----~~~v~~y~p~~~~W~~---l~~~r~~~~~~~~~~~iY~~~~v~GG~~--~~---------~~~~~~- 386 (478)
+.||+.|+ .+.+++|||.+++|.. +|.+|..|++++++++|| ++||.. .. .....|
T Consensus 56 ~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 56 NVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIY----TSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp TEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEE----EECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred CEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEE----EECCCCCCCcEeeeEEEEeCCCCceE
Confidence 34666544 4789999999999998 788999999999999999 999962 11 223345
Q ss_pred ----eccCCceeEEEEEeceec--c-----CC----cceeeeceeeeeecC---CcceeccCCCceeeeccccccccccC
Q 011762 387 ----MDQQSSFHCFGLFLGMQE--K-----GS----VSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLF 448 (478)
Q Consensus 387 ----m~~~R~~~~~~~l~g~l~--~-----~~----~~s~v~~~~~E~Ydp---~W~~v~~m~~~~~~~~~~~~~~~~~~ 448 (478)
|..+|..|++++++|+|+ . +. +.. + |+||| +|+.+++||.++..++++.+
T Consensus 132 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~-~-----~~yd~~~~~W~~~~~~p~~r~~~~~~~~------ 199 (306)
T 3ii7_A 132 TKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNS-C-----EVYDPATETWTELCPMIEARKNHGLVFV------ 199 (306)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCC-E-----EEEETTTTEEEEECCCSSCCBSCEEEEE------
T ss_pred eCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccce-E-----EEeCCCCCeEEECCCccchhhcceEEEE------
Confidence 999999999999999992 1 11 344 5 99999 99999999999987776655
Q ss_pred CCCCceeeecCCcceeccee
Q 011762 449 GIPWTAFMADDSIYFINGNL 468 (478)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~ 468 (478)
++.||++||..
T Consensus 200 ---------~~~i~v~GG~~ 210 (306)
T 3ii7_A 200 ---------KDKIFAVGGQN 210 (306)
T ss_dssp ---------TTEEEEECCEE
T ss_pred ---------CCEEEEEeCCC
Confidence 45677787753
No 30
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.24 E-value=1.3e-11 Score=121.39 Aligned_cols=109 Identities=18% Similarity=0.100 Sum_probs=87.1
Q ss_pred ceEEEecCCCCeEEE---ccccccceeeeecCCeeeeccceeccc--cc---------cccccee-----eccCCceeEE
Q 011762 336 KVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQ--GF---------FLSAHCN-----MDQQSSFHCF 396 (478)
Q Consensus 336 ~~v~~y~p~~~~W~~---l~~~r~~~~~~~~~~~iY~~~~v~GG~--~~---------~~~~~~~-----m~~~R~~~~~ 396 (478)
+.+++||+.+++|.. +|.+|..|++++.+++|| ++||. +. ......| |+.+|..|++
T Consensus 127 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 202 (318)
T 2woz_A 127 DSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIY----CLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGV 202 (318)
T ss_dssp EEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEE----EECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred ceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEE----EEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceE
Confidence 679999999999998 788899999999999999 99996 11 1223445 8999999999
Q ss_pred EEEeceec--c-----CCcceeeeceeeeeecC---CcceeccCCCceeeeccccccccccCCCCCceeeecCCcceecc
Q 011762 397 GLFLGMQE--K-----GSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFING 466 (478)
Q Consensus 397 ~~l~g~l~--~-----~~~~s~v~~~~~E~Ydp---~W~~v~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (478)
++++|+|+ . +.+.. + |+||| +|+.+++||.++..++++.+ ++.||++||
T Consensus 203 ~~~~~~iyv~GG~~~~~~~~~-~-----~~yd~~~~~W~~~~~~p~~r~~~~~~~~---------------~~~i~v~GG 261 (318)
T 2woz_A 203 AIHKGKIVIAGGVTEDGLSAS-V-----EAFDLKTNKWEVMTEFPQERSSISLVSL---------------AGSLYAIGG 261 (318)
T ss_dssp EEETTEEEEEEEEETTEEEEE-E-----EEEETTTCCEEECCCCSSCCBSCEEEEE---------------TTEEEEECC
T ss_pred EEECCEEEEEcCcCCCCccce-E-----EEEECCCCeEEECCCCCCcccceEEEEE---------------CCEEEEECC
Confidence 99999992 1 12233 5 99999 99999999999987766555 567888888
Q ss_pred eee
Q 011762 467 NLH 469 (478)
Q Consensus 467 ~~~ 469 (478)
...
T Consensus 262 ~~~ 264 (318)
T 2woz_A 262 FAM 264 (318)
T ss_dssp BCC
T ss_pred eec
Confidence 643
No 31
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.23 E-value=1.8e-11 Score=119.93 Aligned_cols=107 Identities=14% Similarity=0.118 Sum_probs=85.9
Q ss_pred ceEEEecCCCCeEEE---ccccccceeeeecCCeeeeccceeccc-c---------ccccccee-----eccCCceeEEE
Q 011762 336 KVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQ-G---------FFLSAHCN-----MDQQSSFHCFG 397 (478)
Q Consensus 336 ~~v~~y~p~~~~W~~---l~~~r~~~~~~~~~~~iY~~~~v~GG~-~---------~~~~~~~~-----m~~~R~~~~~~ 397 (478)
+.+++|||.+++|.. ||.+|..|++++++++|| ++||. + +......| |+.+|..++++
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 165 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIY----AVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVA 165 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEE----EECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEE
T ss_pred ceEEEECCCCCeEeECCCCCcCccccEEEEECCEEE----EEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEE
Confidence 578999999999998 788899999999999999 99996 2 12233445 89999999999
Q ss_pred EEeceec--cC-----CcceeeeceeeeeecC---CcceeccCCCceeeeccccccccccCCCCCceeeecCCcceecce
Q 011762 398 LFLGMQE--KG-----SVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGN 467 (478)
Q Consensus 398 ~l~g~l~--~~-----~~~s~v~~~~~E~Ydp---~W~~v~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (478)
+++|+|+ .| .+.. + ++||| +|+.+++||.++..++++.+ ++.||++||.
T Consensus 166 ~~~~~iyv~GG~~~~~~~~~-~-----~~yd~~~~~W~~~~~~p~~r~~~~~~~~---------------~~~iyv~GG~ 224 (308)
T 1zgk_A 166 VLNRLLYAVGGFDGTNRLNS-A-----ECYYPERNEWRMITAMNTIRSGAGVCVL---------------HNCIYAAGGY 224 (308)
T ss_dssp EETTEEEEECCBCSSCBCCC-E-----EEEETTTTEEEECCCCSSCCBSCEEEEE---------------TTEEEEECCB
T ss_pred EECCEEEEEeCCCCCCcCce-E-----EEEeCCCCeEeeCCCCCCccccceEEEE---------------CCEEEEEeCC
Confidence 9999992 11 2334 5 99999 99999999999987766555 4567777775
No 32
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.23 E-value=2.6e-11 Score=118.79 Aligned_cols=116 Identities=18% Similarity=0.145 Sum_probs=91.1
Q ss_pred eeEeeecc------cceEEEecCCCCeEEE---ccccccceeeeecCCeeeeccceeccc-cc---------cccccee-
Q 011762 327 ERAYKYRP------VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQ-GF---------FLSAHCN- 386 (478)
Q Consensus 327 ~~i~~~~~------~~~v~~y~p~~~~W~~---l~~~r~~~~~~~~~~~iY~~~~v~GG~-~~---------~~~~~~~- 386 (478)
+.||+.|+ .+.++.|||.+++|.. +|.+|..|++++++++|| ++||. +. ......|
T Consensus 122 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~yd~~~~~W~ 197 (308)
T 1zgk_A 122 GHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLY----AVGGFDGTNRLNSAECYYPERNEWR 197 (308)
T ss_dssp TEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE----EECCBCSSCBCCCEEEEETTTTEEE
T ss_pred CEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEE----EEeCCCCCCcCceEEEEeCCCCeEe
Confidence 35666544 4789999999999998 788899999999999999 99997 21 1223445
Q ss_pred ----eccCCceeEEEEEeceec--cC-----CcceeeeceeeeeecC---CcceeccCCCceeeeccccccccccCCCCC
Q 011762 387 ----MDQQSSFHCFGLFLGMQE--KG-----SVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFGIPW 452 (478)
Q Consensus 387 ----m~~~R~~~~~~~l~g~l~--~~-----~~~s~v~~~~~E~Ydp---~W~~v~~m~~~~~~~~~~~~~~~~~~~~~~ 452 (478)
|..+|..+++++++|+|+ .| .+.. + ++||| +|+.+++||.++..++++.+
T Consensus 198 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~-v-----~~yd~~~~~W~~~~~~p~~r~~~~~~~~---------- 261 (308)
T 1zgk_A 198 MITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNS-V-----ERYDVETETWTFVAPMKHRRSALGITVH---------- 261 (308)
T ss_dssp ECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCC-E-----EEEETTTTEEEECCCCSSCCBSCEEEEE----------
T ss_pred eCCCCCCccccceEEEECCEEEEEeCCCCCCccce-E-----EEEeCCCCcEEECCCCCCCccceEEEEE----------
Confidence 899999999999999992 11 1334 5 99999 99999999999987766555
Q ss_pred ceeeecCCcceecce
Q 011762 453 TAFMADDSIYFINGN 467 (478)
Q Consensus 453 ~~~~~~~~~~~~~~~ 467 (478)
++.||++||.
T Consensus 262 -----~~~i~v~GG~ 271 (308)
T 1zgk_A 262 -----QGRIYVLGGY 271 (308)
T ss_dssp -----TTEEEEECCB
T ss_pred -----CCEEEEEcCc
Confidence 5567888874
No 33
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.22 E-value=2.1e-11 Score=118.84 Aligned_cols=116 Identities=17% Similarity=0.253 Sum_probs=90.2
Q ss_pred eeEeeecc------cceEEEecCCCCeEEE---ccccccceeeeecCCeeeeccceeccc-c---------ccccccee-
Q 011762 327 ERAYKYRP------VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQ-G---------FFLSAHCN- 386 (478)
Q Consensus 327 ~~i~~~~~------~~~v~~y~p~~~~W~~---l~~~r~~~~~~~~~~~iY~~~~v~GG~-~---------~~~~~~~~- 386 (478)
+.||+.|+ .+.+++|||.+++|.. ||.+|..|++++++++|| ++||. + +......|
T Consensus 62 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~~d~~~~~W~ 137 (302)
T 2xn4_A 62 GLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLY----AVGGFDGSTGLSSVEAYNIKSNEWF 137 (302)
T ss_dssp TEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEE----EEEEECSSCEEEEEEEEETTTTEEE
T ss_pred CEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEE----EEcCCCCCccCceEEEEeCCCCeEe
Confidence 35666544 3689999999999998 788899999999999999 99996 2 12233445
Q ss_pred ----eccCCceeEEEEEeceec--cC---C----cceeeeceeeeeecC---CcceeccCCCceeeeccccccccccCCC
Q 011762 387 ----MDQQSSFHCFGLFLGMQE--KG---S----VSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFGI 450 (478)
Q Consensus 387 ----m~~~R~~~~~~~l~g~l~--~~---~----~~s~v~~~~~E~Ydp---~W~~v~~m~~~~~~~~~~~~~~~~~~~~ 450 (478)
|+.+|..+++++++|+|+ .| . +.. + |+||| +|+.+++||.++..++++.+
T Consensus 138 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~-~-----~~yd~~~~~W~~~~~~p~~r~~~~~~~~-------- 203 (302)
T 2xn4_A 138 HVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLST-V-----ECYNATTNEWTYIAEMSTRRSGAGVGVL-------- 203 (302)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCC-E-----EEEETTTTEEEEECCCSSCCBSCEEEEE--------
T ss_pred ecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccE-E-----EEEeCCCCcEEECCCCccccccccEEEE--------
Confidence 899999999999999992 11 1 334 5 99999 99999999999987766555
Q ss_pred CCceeeecCCcceecce
Q 011762 451 PWTAFMADDSIYFINGN 467 (478)
Q Consensus 451 ~~~~~~~~~~~~~~~~~ 467 (478)
++.||++||.
T Consensus 204 -------~~~iyv~GG~ 213 (302)
T 2xn4_A 204 -------NNLLYAVGGH 213 (302)
T ss_dssp -------TTEEEEECCB
T ss_pred -------CCEEEEECCC
Confidence 4567777764
No 34
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.21 E-value=1.6e-12 Score=141.94 Aligned_cols=189 Identities=10% Similarity=-0.020 Sum_probs=125.2
Q ss_pred HHHhcCCChHHHHHHHHHHhcccCcCCCCCHHHHHhhcccCCCCc--h---HHHHHHHHHHhhhcCcccchh--hhhhhh
Q 011762 245 WARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDP--E---LASKVVLESLFFKAETPYRQR--ALAAEE 317 (478)
Q Consensus 245 Wl~~~~~~~~~r~~~~~~~Ll~~VRf~~ls~~~L~~~~~~~~l~~--~---~c~~~l~ea~~~~~~~~~~~~--~~~~~~ 317 (478)
|+.++ ...|...+ +.+++.+||++|.+.++......++... + .|.++... .++.... ....+.
T Consensus 315 ~~~~~---e~~R~~~l-E~ldE~e~~~l~~~hY~~~~a~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 384 (695)
T 2zwa_A 315 SADEA---TKKELLKV-EPFDELEEFHLFCHHYVLCHATNYKEFAFTQGFLFDRSISEI------NLTVDEDYQLLECEC 384 (695)
T ss_dssp HSCHH---HHHHHHHH-SCCCCHHHHHHHHHTEEEEEEESCTTCCCCTTTCCCC----C------CCEECSSEEEEECCC
T ss_pred hCCHH---HHHHHHhc-cccchHHHHHHhhccEEEEEEecCCccccCcccCCCCccccc------cCCCCCceeEeccCC
Confidence 88887 66777888 7899999999998888877666655431 2 23222210 0000000 001111
Q ss_pred hhccccccc------eeEeeecc-----cceEEEecCCCCeEEEc---------cccccceeeeec--CCeeeeccceec
Q 011762 318 ANSTYRRFV------ERAYKYRP-----VKVVEFELPRQQCVVYL---------DLKREECAHLFP--AGRIYSQAFHLG 375 (478)
Q Consensus 318 ~~~~pr~~~------~~i~~~~~-----~~~v~~y~p~~~~W~~l---------~~~r~~~~~~~~--~~~iY~~~~v~G 375 (478)
. + +|++. +.||+.|+ .+.+.+|||.+++|..+ |.+|.+|+++++ +|+|| ++|
T Consensus 385 ~-p-~rr~g~~~~~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~ly----v~G 458 (695)
T 2zwa_A 385 P-I-NRKFGDVDVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLL----LIG 458 (695)
T ss_dssp T-T-CCBSCEEEECSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEE----EEC
T ss_pred C-C-CCceeEEEEECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEE----EEc
Confidence 1 1 34333 34666554 46899999999999863 456899999999 99999 999
Q ss_pred cccc-c-ccc---------cee-----eccCCceeEEEEE-eceec--cC--CcceeeeceeeeeecC---Ccceecc--
Q 011762 376 GQGF-F-LSA---------HCN-----MDQQSSFHCFGLF-LGMQE--KG--SVSFAVDYEFAARIKP---TEEYVSK-- 429 (478)
Q Consensus 376 G~~~-~-~~~---------~~~-----m~~~R~~~~~~~l-~g~l~--~~--~~~s~v~~~~~E~Ydp---~W~~v~~-- 429 (478)
|... . ..+ ..| |+.+|.+|+++++ +|+|+ .| .-.. | |+||| +|+.+++
T Consensus 459 G~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~-v-----~~yd~~t~~W~~~~~~g 532 (695)
T 2zwa_A 459 GRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPA-M-----LLYNVTEEIFKDVTPKD 532 (695)
T ss_dssp CBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCS-E-----EEEETTTTEEEECCCSS
T ss_pred CCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCC-E-----EEEECCCCceEEccCCC
Confidence 9721 1 222 344 9999999999997 99992 12 1113 5 99999 9999997
Q ss_pred -CCCceeeeccccccccccCCCCCceeeecCCcceecce
Q 011762 430 -YKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGN 467 (478)
Q Consensus 430 -m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (478)
||.++..+++++++.. ++.||++||.
T Consensus 533 ~~p~~r~~~~a~v~~~~------------~~~iyv~GG~ 559 (695)
T 2zwa_A 533 EFFQNSLVSAGLEFDPV------------SKQGIILGGG 559 (695)
T ss_dssp GGGGSCCBSCEEEEETT------------TTEEEEECCB
T ss_pred CCCCcccceeEEEEeCC------------CCEEEEECCc
Confidence 8889987776555420 2678888875
No 35
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.21 E-value=4.2e-11 Score=116.61 Aligned_cols=116 Identities=20% Similarity=0.186 Sum_probs=90.9
Q ss_pred eeEeeecc------cceEEEecCCCCeEEE---ccccccceeeeecCCeeeeccceeccc-cc---------cccccee-
Q 011762 327 ERAYKYRP------VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQ-GF---------FLSAHCN- 386 (478)
Q Consensus 327 ~~i~~~~~------~~~v~~y~p~~~~W~~---l~~~r~~~~~~~~~~~iY~~~~v~GG~-~~---------~~~~~~~- 386 (478)
+.+|+.++ .+.++.||+.+++|.. +|.+|..|++++++++|| ++||. +. ......|
T Consensus 113 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~~d~~~~~W~ 188 (301)
T 2vpj_A 113 DMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIY----CLGGYDGLNILNSVEKYDPHTGHWT 188 (301)
T ss_dssp TEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEE----EECCBCSSCBCCCEEEEETTTTEEE
T ss_pred CEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEE----EECCCCCCcccceEEEEeCCCCcEE
Confidence 34666543 4689999999999997 788899999999999999 99997 21 1223455
Q ss_pred ----eccCCceeEEEEEeceec--cC-----CcceeeeceeeeeecC---CcceeccCCCceeeeccccccccccCCCCC
Q 011762 387 ----MDQQSSFHCFGLFLGMQE--KG-----SVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFGIPW 452 (478)
Q Consensus 387 ----m~~~R~~~~~~~l~g~l~--~~-----~~~s~v~~~~~E~Ydp---~W~~v~~m~~~~~~~~~~~~~~~~~~~~~~ 452 (478)
|+.+|..+++++++|+|+ .| .+.. | ++||| +|+.+++||.++..++++.+
T Consensus 189 ~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~-v-----~~yd~~~~~W~~~~~~p~~r~~~~~~~~---------- 252 (301)
T 2vpj_A 189 NVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSS-V-----EAYNIRTDSWTTVTSMTTPRCYVGATVL---------- 252 (301)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCC-E-----EEEETTTTEEEEECCCSSCCBSCEEEEE----------
T ss_pred eCCCCCcccccceEEEECCEEEEEeCCCCCcccce-E-----EEEeCCCCcEEECCCCCCcccceeEEEE----------
Confidence 899999999999999992 11 1334 5 99999 99999999999987766555
Q ss_pred ceeeecCCcceecce
Q 011762 453 TAFMADDSIYFINGN 467 (478)
Q Consensus 453 ~~~~~~~~~~~~~~~ 467 (478)
++.||++||.
T Consensus 253 -----~~~i~v~GG~ 262 (301)
T 2vpj_A 253 -----RGRLYAIAGY 262 (301)
T ss_dssp -----TTEEEEECCB
T ss_pred -----CCEEEEEcCc
Confidence 4567777774
No 36
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.20 E-value=5.3e-11 Score=117.05 Aligned_cols=116 Identities=12% Similarity=0.022 Sum_probs=89.1
Q ss_pred eeEeeecccceEEEecCCCCeEEE--cc--ccccceeeeecCCeeeeccceecccc-----c--c---------ccccee
Q 011762 327 ERAYKYRPVKVVEFELPRQQCVVY--LD--LKREECAHLFPAGRIYSQAFHLGGQG-----F--F---------LSAHCN 386 (478)
Q Consensus 327 ~~i~~~~~~~~v~~y~p~~~~W~~--l~--~~r~~~~~~~~~~~iY~~~~v~GG~~-----~--~---------~~~~~~ 386 (478)
+.||+.++. .+.+|||.+++|.. ++ .+|..|++++.++.|| ++||.. . . .....|
T Consensus 16 ~~i~~~GG~-~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~ly----v~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 90 (318)
T 2woz_A 16 DLILLVNDT-AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVY----VVGGLYVDEENKDQPLQSYFFQLDNVSSEW 90 (318)
T ss_dssp EEEEEECSS-EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEE----EEESSCC-------CCCBEEEEEETTTTEE
T ss_pred chhhhcccc-ceEEECCCCCceecccCCccCCccceEEEEECCEEE----EECCcccCccccCCCccccEEEEeCCCCcE
Confidence 567777663 58999999999987 43 5789999999999999 999941 1 1 112334
Q ss_pred -----eccCCceeEEEEEeceec----c----CCcceeeeceeeeeecC---CcceeccCCCceeeeccccccccccCCC
Q 011762 387 -----MDQQSSFHCFGLFLGMQE----K----GSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFGI 450 (478)
Q Consensus 387 -----m~~~R~~~~~~~l~g~l~----~----~~~~s~v~~~~~E~Ydp---~W~~v~~m~~~~~~~~~~~~~~~~~~~~ 450 (478)
|+.+|..|++++++|+|+ . +...+.| ++||| +|+.+++||.++..++++++
T Consensus 91 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~-----~~yd~~~~~W~~~~~~p~~r~~~~~~~~-------- 157 (318)
T 2woz_A 91 VGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSV-----LCYDPVAAKWSEVKNLPIKVYGHNVISH-------- 157 (318)
T ss_dssp EECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEE-----EEEETTTTEEEEECCCSSCEESCEEEEE--------
T ss_pred EECCCCCccccccceEEECCEEEEEcCccCCCCcccceE-----EEEeCCCCCEeECCCCCCcccccEEEEE--------
Confidence 999999999999999992 1 1122335 99999 99999999999987776555
Q ss_pred CCceeeecCCcceecce
Q 011762 451 PWTAFMADDSIYFINGN 467 (478)
Q Consensus 451 ~~~~~~~~~~~~~~~~~ 467 (478)
++.||++||.
T Consensus 158 -------~~~iyv~GG~ 167 (318)
T 2woz_A 158 -------NGMIYCLGGK 167 (318)
T ss_dssp -------TTEEEEECCE
T ss_pred -------CCEEEEEcCC
Confidence 5678888885
No 37
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.06 E-value=1.4e-10 Score=100.42 Aligned_cols=94 Identities=14% Similarity=0.221 Sum_probs=78.3
Q ss_pred EEEEE---eeEEeehhhhhcCCHHHHHhhcCCCCCCCCceEEEecCCCcHHHHHHHHHHHccCc----------------
Q 011762 70 TVLRV---KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSST---------------- 130 (478)
Q Consensus 70 V~l~v---~~f~aHr~vLaa~S~yF~~mf~~~~~es~~~~i~l~~~~v~~~~f~~lL~fiYtg~---------------- 130 (478)
|+|.. +.|.+||.+ |..|++|++||.+.- .+.|.|+ +++..+++.|++|+|+.+
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~----~~~Ipl~--~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~ 76 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG----MDPVPLP--NVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 76 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC----CSSEECT--TCCHHHHHHHHHHHHHHTTCC-------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC----CCceecC--CcCHHHHHHHHHHHHHhccCCCccccccccccch
Confidence 56666 369999998 889999999998631 4468887 999999999999999865
Q ss_pred ----------eecCccchHHHHHHHHhhcchhhHHHHHHHhhhcCCCCHHhH
Q 011762 131 ----------LSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESA 172 (478)
Q Consensus 131 ----------i~i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~~~~l~~~n~ 172 (478)
+.++. +++.+|+.||++|++..|.+.|++++.. .+...+.
T Consensus 77 ~~i~~wD~~F~~vd~-~~l~eLi~AAnyL~I~~Lldl~c~~vA~-~ikgkt~ 126 (141)
T 1fs1_B 77 DDIPVWDQEFLKVDQ-GTLFELILAANYLDIKGLLDVTCKTVAN-MIKGKTP 126 (141)
T ss_dssp ----HHHHHHTCSCH-HHHHHHHHHHHHHTCHHHHHHHHHHHHH-HHTTCCH
T ss_pred hhhhHHHHHHHhCCH-HHHHHHHHHHHHHhhhHHHHHHHHHHHH-HHcCCCH
Confidence 56676 8999999999999999999999999987 4543333
No 38
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.05 E-value=3.4e-10 Score=112.97 Aligned_cols=116 Identities=16% Similarity=0.085 Sum_probs=87.1
Q ss_pred eeEeeecc--cceEEEecCC--CCeEEE---cc-ccccceeeeecCCeeeeccceeccc-c-----cccc---------c
Q 011762 327 ERAYKYRP--VKVVEFELPR--QQCVVY---LD-LKREECAHLFPAGRIYSQAFHLGGQ-G-----FFLS---------A 383 (478)
Q Consensus 327 ~~i~~~~~--~~~v~~y~p~--~~~W~~---l~-~~r~~~~~~~~~~~iY~~~~v~GG~-~-----~~~~---------~ 383 (478)
+.||+.|+ .+.+.+||+. +++|.. || .+|..|++++++++|| ++||. . .... .
T Consensus 20 ~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~ly----v~GG~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 20 DTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLY----VFGGIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp TEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEE----EECCEEECTTSCEEECCCEEEEETTT
T ss_pred CEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEE----EEcCCCCCCCccceeeccEEEEeCCC
Confidence 45677554 3689999998 599998 77 7899999999999999 99997 2 1112 2
Q ss_pred cee-----ec-cCCceeEEEEEeceec--cC---------------------------------------Ccceeeecee
Q 011762 384 HCN-----MD-QQSSFHCFGLFLGMQE--KG---------------------------------------SVSFAVDYEF 416 (478)
Q Consensus 384 ~~~-----m~-~~R~~~~~~~l~g~l~--~~---------------------------------------~~~s~v~~~~ 416 (478)
..| |. .+|..|++++++|+|+ .| .+.. |
T Consensus 96 ~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v---- 170 (357)
T 2uvk_A 96 NSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKF-L---- 170 (357)
T ss_dssp TEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCE-E----
T ss_pred CcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCccc-E----
Confidence 334 77 9999999999999992 12 1233 5
Q ss_pred eeeecC---CcceeccCCCceee-eccccccccccCCCCCceeeecCCcceecce
Q 011762 417 AARIKP---TEEYVSKYKGNYTF-TGGKAVGYRNLFGIPWTAFMADDSIYFINGN 467 (478)
Q Consensus 417 ~E~Ydp---~W~~v~~m~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (478)
|+||| +|+.+++||.++.. ++++.+ ++.||++||.
T Consensus 171 -~~yd~~~~~W~~~~~~p~~~~~~~~~~~~---------------~~~iyv~GG~ 209 (357)
T 2uvk_A 171 -LSFDPSTQQWSYAGESPWYGTAGAAVVNK---------------GDKTWLINGE 209 (357)
T ss_dssp -EEEETTTTEEEEEEECSSCCCBSCEEEEE---------------TTEEEEECCE
T ss_pred -EEEeCCCCcEEECCCCCCCCcccccEEEE---------------CCEEEEEeee
Confidence 99999 99999999987654 544444 5678888885
No 39
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=99.03 E-value=4.7e-11 Score=105.75 Aligned_cols=104 Identities=12% Similarity=0.245 Sum_probs=61.5
Q ss_pred EEEEE---eeEEeehhhhhcCCHHHHHhhcCCCCCCCCceEEEecCCCcHHHHHHHHHHHccCc----------------
Q 011762 70 TVLRV---KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSST---------------- 130 (478)
Q Consensus 70 V~l~v---~~f~aHr~vLaa~S~yF~~mf~~~~~es~~~~i~l~~~~v~~~~f~~lL~fiYtg~---------------- 130 (478)
|+|.. +.|.+|+.+ |..|++|++||.++. ..+.|.|+ ++++.+|+.|++|+|+.+
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~~Ipl~--~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~ 79 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC---VDNGVPLP--NVTSKILAKVIEYCKRHVEAAASKAEAVEGAATS 79 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC---------------CCT--TSCHHHHHHHHHC---------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC---CCCceeCC--cCcHHHHHHHHHHHHHcccCCCcccccccccccc
Confidence 55554 359999998 889999999998753 23466666 999999999999999976
Q ss_pred -----------eecCccchHHHHHHHHhhcchhhHHHHHHHhhhcCCC---CHHhHHHHHhccch
Q 011762 131 -----------LSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPM---TCESALLYLDLPSS 181 (478)
Q Consensus 131 -----------i~i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~~~~l---~~~n~l~i~~~A~~ 181 (478)
+.++. +++.+|+.||++|++..|.++|++++.. .+ +++++-.++.+...
T Consensus 80 ~~~i~~wD~~Fl~vd~-~~l~eLi~AAnyL~I~~Lldl~c~~vA~-~ikgkt~eeir~~f~I~nd 142 (160)
T 2p1m_A 80 DDDLKAWDADFMKIDQ-ATLFELILAANYLNIKNLLDLTCQTVAD-MIKGKTPEEIRTTFNIKND 142 (160)
T ss_dssp ----------------------CHHHHHHTTCHHHHHHHHHHHHH-TTTTCCHHHHHHHTTCCCC
T ss_pred cchhhHHHHHHHcCCH-HHHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHcCCCCC
Confidence 45665 7899999999999999999999999988 56 88888888877653
No 40
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.97 E-value=1.1e-09 Score=109.18 Aligned_cols=108 Identities=11% Similarity=-0.003 Sum_probs=80.1
Q ss_pred ceEEEecCCCCeEEE---ccccccc-eeeeecCCeeeeccceeccc---c--------cc--ccccee-----eccCC--
Q 011762 336 KVVEFELPRQQCVVY---LDLKREE-CAHLFPAGRIYSQAFHLGGQ---G--------FF--LSAHCN-----MDQQS-- 391 (478)
Q Consensus 336 ~~v~~y~p~~~~W~~---l~~~r~~-~~~~~~~~~iY~~~~v~GG~---~--------~~--~~~~~~-----m~~~R-- 391 (478)
+.+++|||.+++|.. +|.+|.. +++++++++|| ++||. + +. .....| |..+|
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iy----v~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~ 243 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTW----LINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGV 243 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEE----EECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEE----EEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccc
Confidence 689999999999998 6765554 99999999999 99996 1 11 134566 66665
Q ss_pred ceeEEEEEeceec--cCC----------------------cceeeeceeeeeecC---CcceeccCCCceeeeccccccc
Q 011762 392 SFHCFGLFLGMQE--KGS----------------------VSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGY 444 (478)
Q Consensus 392 ~~~~~~~l~g~l~--~~~----------------------~~s~v~~~~~E~Ydp---~W~~v~~m~~~~~~~~~~~~~~ 444 (478)
..+++++++|+|+ .|. +.+ + |+||| +|+.+++||.++..++++++
T Consensus 244 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~-~-----~~yd~~~~~W~~~~~~p~~r~~~~~~~~-- 315 (357)
T 2uvk_A 244 AGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYS-T-----DIHLWHNGKWDKSGELSQGRAYGVSLPW-- 315 (357)
T ss_dssp BSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEEC-C-----EEEECC---CEEEEECSSCCBSSEEEEE--
T ss_pred ccceEEEECCEEEEEcCccccCCcccccccceeccccccceee-E-----EEEecCCCceeeCCCCCCCcccceeEEe--
Confidence 4677999999992 110 123 4 99999 99999999999997766555
Q ss_pred cccCCCCCceeeecCCcceeccee
Q 011762 445 RNLFGIPWTAFMADDSIYFINGNL 468 (478)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~ 468 (478)
++.||++||..
T Consensus 316 -------------~~~i~v~GG~~ 326 (357)
T 2uvk_A 316 -------------NNSLLIIGGET 326 (357)
T ss_dssp -------------TTEEEEEEEEC
T ss_pred -------------CCEEEEEeeeC
Confidence 67888999854
No 41
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.75 E-value=1.1e-08 Score=111.74 Aligned_cols=111 Identities=14% Similarity=-0.069 Sum_probs=83.7
Q ss_pred cceEEEecCCCCeEEE---ccccccceeeeec-CCeeeeccceecccc-------ccccccee--------eccCCceeE
Q 011762 335 VKVVEFELPRQQCVVY---LDLKREECAHLFP-AGRIYSQAFHLGGQG-------FFLSAHCN--------MDQQSSFHC 395 (478)
Q Consensus 335 ~~~v~~y~p~~~~W~~---l~~~r~~~~~~~~-~~~iY~~~~v~GG~~-------~~~~~~~~--------m~~~R~~~~ 395 (478)
.+.+++||+.+++|.. ||.+|..|+++++ +++|| ++||.. +......| |..+|..|+
T Consensus 467 ~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iy----v~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~ 542 (695)
T 2zwa_A 467 LSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVL----ILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSA 542 (695)
T ss_dssp CCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEE----EECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSC
T ss_pred cccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEE----EECCCCCCCCEEEEECCCCceEEccCCCCCCCccccee
Confidence 4689999999999998 8889999999996 99999 999972 22334556 677999999
Q ss_pred EEEEe---ceec--cC------CcceeeeceeeeeecC---C------cceeccC-CCceeeeccccccccccCCCCCce
Q 011762 396 FGLFL---GMQE--KG------SVSFAVDYEFAARIKP---T------EEYVSKY-KGNYTFTGGKAVGYRNLFGIPWTA 454 (478)
Q Consensus 396 ~~~l~---g~l~--~~------~~~s~v~~~~~E~Ydp---~------W~~v~~m-~~~~~~~~~~~~~~~~~~~~~~~~ 454 (478)
+++++ |+|+ .| ...+.| ++||| + |+.++++ +.++..++++.++
T Consensus 543 a~v~~~~~~~iyv~GG~~~~~~~~~~~v-----~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~----------- 606 (695)
T 2zwa_A 543 GLEFDPVSKQGIILGGGFMDQTTVSDKA-----IIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYIT----------- 606 (695)
T ss_dssp EEEEETTTTEEEEECCBCTTSSCBCCEE-----EEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEE-----------
T ss_pred EEEEeCCCCEEEEECCcCCCCCeeeCcE-----EEEEccCCccccceEEEEcCCCCCCCcccceEEEeC-----------
Confidence 88888 7782 11 112235 99999 7 8999887 4777766665553
Q ss_pred eeecCCcceeccee
Q 011762 455 FMADDSIYFINGNL 468 (478)
Q Consensus 455 ~~~~~~~~~~~~~~ 468 (478)
++.||++||..
T Consensus 607 ---~~~iyv~GG~~ 617 (695)
T 2zwa_A 607 ---PRKLLIVGGTS 617 (695)
T ss_dssp ---TTEEEEECCBC
T ss_pred ---CCEEEEECCcc
Confidence 26788888853
No 42
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.50 E-value=1.2e-07 Score=102.70 Aligned_cols=89 Identities=15% Similarity=-0.000 Sum_probs=66.7
Q ss_pred ceEEEecCCCCeEEE---cccccccee--ee-ecCCeeeeccceecccc------ccccccee-----eccCCceeEEEE
Q 011762 336 KVVEFELPRQQCVVY---LDLKREECA--HL-FPAGRIYSQAFHLGGQG------FFLSAHCN-----MDQQSSFHCFGL 398 (478)
Q Consensus 336 ~~v~~y~p~~~~W~~---l~~~r~~~~--~~-~~~~~iY~~~~v~GG~~------~~~~~~~~-----m~~~R~~~~~~~ 398 (478)
..+.+|||.+++|.. |+.+|..++ ++ +.+|+|| ++||.. +......| |+.+|.+|++++
T Consensus 219 ~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~ly----v~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~ 294 (656)
T 1k3i_A 219 TLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIV----VTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSAT 294 (656)
T ss_dssp EEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEE----EECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEE
T ss_pred EEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEE----EeCCCCCCceEEecCcCCceeECCCCCccccccceEE
Confidence 478999999999987 666676553 44 4689999 999962 22344556 999999999999
Q ss_pred E-eceec--cC------CcceeeeceeeeeecC---Cccee-----ccCCCce
Q 011762 399 F-LGMQE--KG------SVSFAVDYEFAARIKP---TEEYV-----SKYKGNY 434 (478)
Q Consensus 399 l-~g~l~--~~------~~~s~v~~~~~E~Ydp---~W~~v-----~~m~~~~ 434 (478)
+ +|+|+ .| .+.+ + |+||| +|+.+ +||+.++
T Consensus 295 ~~dg~iyv~GG~~~~~~~~~~-~-----e~yd~~t~~W~~~~~~~~~p~~~~~ 341 (656)
T 1k3i_A 295 MSDGRVFTIGGSWSGGVFEKN-G-----EVYSPSSKTWTSLPNAKVNPMLTAD 341 (656)
T ss_dssp CTTSCEEEECCCCCSSSCCCC-E-----EEEETTTTEEEEETTSCSGGGCCCC
T ss_pred ecCCeEEEEeCcccCCccccc-c-----eEeCCCCCcceeCCCcccccccccc
Confidence 9 99992 22 2334 5 99999 99998 5666654
No 43
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.44 E-value=4.2e-07 Score=73.32 Aligned_cols=77 Identities=19% Similarity=0.286 Sum_probs=63.8
Q ss_pred EEEEE---eeEEeehhhhhcCCHHHHHhhcCCCCCCCCceEEEecCCCcHHHHHHHHHHHccCc--------------ee
Q 011762 70 TVLRV---KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSST--------------LS 132 (478)
Q Consensus 70 V~l~v---~~f~aHr~vLaa~S~yF~~mf~~~~~es~~~~i~l~~~~v~~~~f~~lL~fiYtg~--------------i~ 132 (478)
|+|.. ..|.+++.+ |..|.+++.||.+++ |.....|.|+ +++..+++.+++|+|.-+ ..
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Iplp--~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~ 81 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RESKGRIELK--QFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFE 81 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEET--TSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCC
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccCCCceecC--CcCHHHHHHHHHHHHHhcccCCCccccccCCCcc
Confidence 66666 369999997 889999999999866 6566788888 999999999999998743 23
Q ss_pred cCccchHHHHHHHHhhcch
Q 011762 133 TTTPTALLDVLMAADKFEV 151 (478)
Q Consensus 133 i~~~~~v~~lL~aA~~l~i 151 (478)
++. +.+.+|+.||+||++
T Consensus 82 vd~-~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 82 IPT-EMSLELLLAADYLSI 99 (99)
T ss_dssp CCH-HHHHHHHHHHHHHCC
T ss_pred CCH-HHHHHHHHHHHHhCc
Confidence 554 789999999999975
No 44
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.37 E-value=5.3e-07 Score=72.35 Aligned_cols=78 Identities=19% Similarity=0.225 Sum_probs=59.5
Q ss_pred EEEEE---eeEEeehhhhhcCCHHHHHhhcC-CC-CCCCCceEEEecCCCcHHHHHHHHHHHccCc-----------eec
Q 011762 70 TVLRV---KTVHISSPILAAKSPFFYKLFSN-GM-RESEQRYVTLRIHASEEAALMELLNFMYSST-----------LST 133 (478)
Q Consensus 70 V~l~v---~~f~aHr~vLaa~S~yF~~mf~~-~~-~es~~~~i~l~~~~v~~~~f~~lL~fiYtg~-----------i~i 133 (478)
|+|.. ..|.+++.+ |..|.++++|+.+ +. .|+....|.|+ +++..+++.+++|+|.-+ ..+
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~--~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~v 79 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFR--EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPI 79 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECS--SCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCC--CCCHHHHHHHHHHHHHccccCCCcccCCCccc
Confidence 45555 369999997 8899999999986 33 56666788887 999999999999998743 245
Q ss_pred CccchHHHHHHHHhhcch
Q 011762 134 TTPTALLDVLMAADKFEV 151 (478)
Q Consensus 134 ~~~~~v~~lL~aA~~l~i 151 (478)
+. +.+.+|+.||++|++
T Consensus 80 d~-~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 80 AP-EIALELLMAANFLDC 96 (96)
T ss_dssp CT-TTHHHHHHHHHHHTC
T ss_pred CH-HHHHHHHHHHHHhCc
Confidence 65 789999999999975
No 45
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.33 E-value=5.8e-07 Score=97.29 Aligned_cols=111 Identities=14% Similarity=0.048 Sum_probs=76.6
Q ss_pred ccceEEEecCCCCeEEE-ccccc---------cceeee---ecCCeeeeccceecccc----cc------------cccc
Q 011762 334 PVKVVEFELPRQQCVVY-LDLKR---------EECAHL---FPAGRIYSQAFHLGGQG----FF------------LSAH 384 (478)
Q Consensus 334 ~~~~v~~y~p~~~~W~~-l~~~r---------~~~~~~---~~~~~iY~~~~v~GG~~----~~------------~~~~ 384 (478)
+.+.+++|||.++.|.. +..++ ..++++ ..+++|| ++||.. .. ....
T Consensus 367 ~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~----v~GG~~~~~~~~~~~~~~~v~~yd~~~~ 442 (656)
T 1k3i_A 367 PSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKIL----TFGGSPDYQDSDATTNAHIITLGEPGTS 442 (656)
T ss_dssp SSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEE----EECCBSSSSSSBCCCCEEEEECCSTTSC
T ss_pred CccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEE----EEeCCCCCCCCCcCCcceEEEcCCCCCC
Confidence 46789999999999876 33222 223333 3599999 999951 11 1112
Q ss_pred ee-------eccCCceeEEEEE-eceec--cC-----------CcceeeeceeeeeecC---CcceeccCCCceeeeccc
Q 011762 385 CN-------MDQQSSFHCFGLF-LGMQE--KG-----------SVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGK 440 (478)
Q Consensus 385 ~~-------m~~~R~~~~~~~l-~g~l~--~~-----------~~~s~v~~~~~E~Ydp---~W~~v~~m~~~~~~~~~~ 440 (478)
.| |+.+|..++++++ +|+|+ .| .+.+ + |+||| +|+.+++|+.+|..|+++
T Consensus 443 ~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~-v-----~~ydp~t~~W~~~~~~~~~R~~hs~a 516 (656)
T 1k3i_A 443 PNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFT-P-----EIYVPEQDTFYKQNPNSIVRVYHSIS 516 (656)
T ss_dssp CEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCC-C-----EEEEGGGTEEEECCCCSSCCCTTEEE
T ss_pred CeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccc-e-----EEEcCCCCceeecCCCCCccccccHh
Confidence 33 8899999999888 99981 11 1233 5 99999 999999999999988765
Q ss_pred cccccccCCCCCceeeecCCcceecce
Q 011762 441 AVGYRNLFGIPWTAFMADDSIYFINGN 467 (478)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (478)
.+-. |.+||++||.
T Consensus 517 ~ll~-------------dg~v~v~GG~ 530 (656)
T 1k3i_A 517 LLLP-------------DGRVFNGGGG 530 (656)
T ss_dssp EECT-------------TSCEEEEECC
T ss_pred hcCC-------------CcEEEecCCC
Confidence 4422 4567777774
No 46
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.31 E-value=2.2e-06 Score=76.10 Aligned_cols=107 Identities=10% Similarity=0.214 Sum_probs=78.8
Q ss_pred cEEEEE---eeEEeehhhhhcCCHHHHHhhcCCCC----CCCCceEEEecCCCcHHHHHHHHHHHccCc-----------
Q 011762 69 STVLRV---KTVHISSPILAAKSPFFYKLFSNGMR----ESEQRYVTLRIHASEEAALMELLNFMYSST----------- 130 (478)
Q Consensus 69 DV~l~v---~~f~aHr~vLaa~S~yF~~mf~~~~~----es~~~~i~l~~~~v~~~~f~~lL~fiYtg~----------- 130 (478)
-|+|.. ..|.+++.+ |..|.+++.|+..... +.....|.|+ +++..+|+.|++|++.-+
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~Iplp--nV~s~iL~kVieyc~~h~~~~~~~~~~~~ 84 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVP--NVRSSVLQKVIEWAEHHRDSNFPDEDDDD 84 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECT--TCCHHHHHHHHHHHHHTTTCCCCC-----
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeC--CCCHHHHHHHHHHHHHcccCCCccccccc
Confidence 466666 369999998 6789999999976322 1223567777 999999999999997643
Q ss_pred --------------eecCccchHHHHHHHHhhcchhhHHHHHHHhhhcC--CCCHHhHHHHHhcc
Q 011762 131 --------------LSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNL--PMTCESALLYLDLP 179 (478)
Q Consensus 131 --------------i~i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~~~--~l~~~n~l~i~~~A 179 (478)
+.++. +.+.+|+.||+||+|..|.+.|++.+..+ ..+++..-.++.+.
T Consensus 85 ~~~~~~i~~wD~~Fl~vd~-~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeeiR~~f~I~ 148 (169)
T 3v7d_A 85 SRKSAPVDSWDREFLKVDQ-EMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIV 148 (169)
T ss_dssp ---CCCCCHHHHHHTCSCH-HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHHHHHHTCC
T ss_pred ccccccccHHHHHHHcCCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHHHHHcCCC
Confidence 23444 67899999999999999999999998542 45666555555443
No 47
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.26 E-value=3.2e-06 Score=69.19 Aligned_cols=93 Identities=17% Similarity=0.239 Sum_probs=74.3
Q ss_pred cEEEEEe--eEEeehhhhhcCC-HHHHHhhcCCCC----CCCCceEEEecCCCcHHHHHHHHHHHccCceecCccchHHH
Q 011762 69 STVLRVK--TVHISSPILAAKS-PFFYKLFSNGMR----ESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLD 141 (478)
Q Consensus 69 DV~l~v~--~f~aHr~vLaa~S-~yF~~mf~~~~~----es~~~~i~l~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ 141 (478)
-|+|.|+ .|...+..|+... .+|.+||.+... ....+++-+ +-+|..|+.||+|+.+|++.++..-....
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi---DRdp~~F~~IL~~lr~g~l~~p~~~~~~~ 83 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI---DRDPTYFGPVLNYLRHGKLVINKDLAEEG 83 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE---CSCHHHHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe---cCChHHHHHHHHHhCCCeeCCCCCCCHHH
Confidence 4678885 4999999998875 578999986421 113456766 78999999999999999998865234689
Q ss_pred HHHHHhhcchhhHHHHHHHhhhc
Q 011762 142 VLMAADKFEVASCMRYCSRLLRN 164 (478)
Q Consensus 142 lL~aA~~l~i~~L~~~C~~~L~~ 164 (478)
++.-|.+|++++|++.|.+.+.+
T Consensus 84 l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 84 VLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHhc
Confidence 99999999999999999987754
No 48
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.78 E-value=2.8e-05 Score=64.00 Aligned_cols=79 Identities=18% Similarity=0.193 Sum_probs=58.6
Q ss_pred cEEEEE---eeEEeehhhhhcCCHHHHHhhcC--CCCCCCCceEEEecCCCcHHHHHHHHHHHccCc-----------ee
Q 011762 69 STVLRV---KTVHISSPILAAKSPFFYKLFSN--GMRESEQRYVTLRIHASEEAALMELLNFMYSST-----------LS 132 (478)
Q Consensus 69 DV~l~v---~~f~aHr~vLaa~S~yF~~mf~~--~~~es~~~~i~l~~~~v~~~~f~~lL~fiYtg~-----------i~ 132 (478)
-|+|.. ..|.+++.+ |..|..++.|+.. .+.|.....|.|+ +++..+++.|++|++.-+ ..
T Consensus 18 ~v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~~~e~~~~~Iplp--nV~s~iL~kVieyc~~h~~~~~~~~~i~~w~ 94 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFR--EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFP 94 (112)
T ss_dssp EEEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC--------CEEECS--SCCHHHHHHHHHHHHHHHHHSSCSSCCCCCC
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCCcccccCCceeCC--CCCHHHHHHHHHHHHHhhhccCCcCCCCCcc
Confidence 356665 369999995 6789999999985 2345545678877 999999999999997643 24
Q ss_pred cCccchHHHHHHHHhhcch
Q 011762 133 TTTPTALLDVLMAADKFEV 151 (478)
Q Consensus 133 i~~~~~v~~lL~aA~~l~i 151 (478)
++. +.+.+|+.||+||++
T Consensus 95 vd~-~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 95 IAP-EIALELLMAANFLDC 112 (112)
T ss_dssp CCH-HHHHHHHHHHHHHTC
T ss_pred cCH-HHHHHHHHHHHHhCc
Confidence 554 789999999999975
No 49
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=97.34 E-value=0.00036 Score=62.92 Aligned_cols=93 Identities=17% Similarity=0.239 Sum_probs=73.2
Q ss_pred cEEEEEe--eEEeehhhhhcCC-HHHHHhhcCCCC----CCCCceEEEecCCCcHHHHHHHHHHHccCceecCccchHHH
Q 011762 69 STVLRVK--TVHISSPILAAKS-PFFYKLFSNGMR----ESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLD 141 (478)
Q Consensus 69 DV~l~v~--~f~aHr~vLaa~S-~yF~~mf~~~~~----es~~~~i~l~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ 141 (478)
=|+|.|+ .|...+..|.... .+|.+||.+... ....+++-+ +-++..|+.||+|+.+|++.++..-....
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI---DRDP~~F~~ILnyLRtG~L~lP~~~~~~~ 89 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI---DRDPTYFGPVLNYLRHGKLVINKDLAEEG 89 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE---CSCSTTHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe---cCChHHHHHHHHHhcCCccCCCCCCCHHH
Confidence 4567885 3888999998764 488999876421 112456666 67899999999999999998865334578
Q ss_pred HHHHHhhcchhhHHHHHHHhhhc
Q 011762 142 VLMAADKFEVASCMRYCSRLLRN 164 (478)
Q Consensus 142 lL~aA~~l~i~~L~~~C~~~L~~ 164 (478)
++.-|.+|+|++|.+.|.+.|.+
T Consensus 90 l~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 90 VLEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCcHHHHHHHHHHHHH
Confidence 99999999999999999998876
No 50
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=96.16 E-value=0.0022 Score=52.74 Aligned_cols=84 Identities=10% Similarity=0.038 Sum_probs=62.4
Q ss_pred cEEEEEee--EEeehhhhhcCC-HHHHHhhcCCC-CCCCCceEEEecCCCcHHHHHHHHHHHccCceecCccchHHHHHH
Q 011762 69 STVLRVKT--VHISSPILAAKS-PFFYKLFSNGM-RESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLM 144 (478)
Q Consensus 69 DV~l~v~~--f~aHr~vLaa~S-~yF~~mf~~~~-~es~~~~i~l~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~lL~ 144 (478)
=|+|.||+ |...+..|.... ..+.+||++.. .....+++-+ +-++..|+.||+|+.+|++.++..-.+..+++
T Consensus 6 ~V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi---DRdp~~F~~ILnylR~G~l~~p~~~~~~~~~~ 82 (115)
T 3kvt_A 6 RVIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF---DRHPGVFAQIINYYRSGKLHYPTDVCGPLFEE 82 (115)
T ss_dssp EEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE---CSCTTTHHHHHHHHHHSCBCCCSSSCHHHHHH
T ss_pred EEEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE---ecChHHHHHHHHHhcCCCCCCCCcccHHHHHH
Confidence 36788853 888888887763 34566665421 1223467777 67899999999999999998875335789999
Q ss_pred HHhhcchhhHH
Q 011762 145 AADKFEVASCM 155 (478)
Q Consensus 145 aA~~l~i~~L~ 155 (478)
-|.+|+|++..
T Consensus 83 Ea~fy~i~~~~ 93 (115)
T 3kvt_A 83 ELEFWGLDSNQ 93 (115)
T ss_dssp HHHHHTCCGGG
T ss_pred HHHHhCCChHH
Confidence 99999998754
No 51
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=95.73 E-value=0.0097 Score=49.55 Aligned_cols=84 Identities=12% Similarity=0.118 Sum_probs=59.5
Q ss_pred cEEEEEe--eEEeehhhhhcCCHHHHHhhcCC----CCCCCCceEEEecCCCcHHHHHHHHHHHccCceecCccchHHHH
Q 011762 69 STVLRVK--TVHISSPILAAKSPFFYKLFSNG----MRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDV 142 (478)
Q Consensus 69 DV~l~v~--~f~aHr~vLaa~S~yF~~mf~~~----~~es~~~~i~l~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~l 142 (478)
=|+|.|| .|..-+..|..... .||... ......+++-+ +-++..|+.||+|+-+|++.++..-.+..+
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~g~~Fi---DRdp~~F~~ILnflR~G~l~~p~~~~~~~l 87 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECISAY 87 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSSCSEEE---CSCHHHHHHHHHHHHHSCBCCCTTSCHHHH
T ss_pred EEEEEeCCEEEEEeHHHHhcCCC---ceecccCCcccccCCCCcEEE---cCChHHHHHHHHHHhcCCCCCCCCcCHHHH
Confidence 4677885 38888888865432 233321 11123456777 679999999999999999987652357899
Q ss_pred HHHHhhcchhhHH-HHH
Q 011762 143 LMAADKFEVASCM-RYC 158 (478)
Q Consensus 143 L~aA~~l~i~~L~-~~C 158 (478)
+.-|.+|+|+.+. +.|
T Consensus 88 ~~Ea~fy~i~~l~l~~c 104 (124)
T 1s1g_A 88 DDELAFYGILPEIIGDC 104 (124)
T ss_dssp HHHHHHTTCCGGGBCHH
T ss_pred HHHHHHcCCChHHHHHH
Confidence 9999999999873 444
No 52
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=94.97 E-value=0.0062 Score=49.21 Aligned_cols=79 Identities=15% Similarity=0.146 Sum_probs=56.2
Q ss_pred EEEEEe--eEEeehhhhhcCCHHHHHhhcCCCC----CCCCceEEEecCCCcHHHHHHHHHHHccCceecCccchHHHHH
Q 011762 70 TVLRVK--TVHISSPILAAKSPFFYKLFSNGMR----ESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVL 143 (478)
Q Consensus 70 V~l~v~--~f~aHr~vLaa~S~yF~~mf~~~~~----es~~~~i~l~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~lL 143 (478)
|+|.|+ .|...+..|..... .||....+ ....+++-+ +-++..|+.||+|+-+|++.++..-.+..++
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~Fi---DRdp~~F~~ILnflR~g~l~~p~~~~~~~l~ 75 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFF---DRDPDIFRHILNFYRTGKLHYPRHECISAYD 75 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEE---CSCTTTHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEE---eCCcHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 677885 37788877765432 23333101 112456776 6789999999999999999876523578999
Q ss_pred HHHhhcchhhH
Q 011762 144 MAADKFEVASC 154 (478)
Q Consensus 144 ~aA~~l~i~~L 154 (478)
.-|.+|+++.+
T Consensus 76 ~Ea~fy~i~~l 86 (105)
T 1nn7_A 76 EELAFFGLIPE 86 (105)
T ss_dssp HHHHHHTCCSC
T ss_pred HHHHHcCCCHH
Confidence 99999999886
No 53
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=94.87 E-value=0.014 Score=49.58 Aligned_cols=81 Identities=11% Similarity=0.055 Sum_probs=58.8
Q ss_pred ccEEEEEe--eEEeehhhhhcCCHHHHHhhcCCC----CCCCCceEEEecCCCcHHHHHHHHHHHccCceecCccchHHH
Q 011762 68 LSTVLRVK--TVHISSPILAAKSPFFYKLFSNGM----RESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLD 141 (478)
Q Consensus 68 ~DV~l~v~--~f~aHr~vLaa~S~yF~~mf~~~~----~es~~~~i~l~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ 141 (478)
.=|+|.|+ .|...+..|..... .||.... .....+++-+ +-++..|+.||+|+-+|++.+...-.+..
T Consensus 35 ~~V~LNVGG~~F~T~~~TL~~~P~---S~L~~~~~~~~~~~~~g~yFi---DRdp~~F~~ILnflR~G~l~~p~~~~~~~ 108 (140)
T 2nz0_B 35 ELIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECISA 108 (140)
T ss_dssp CEEEEEETTEEEEEEHHHHHTCTT---STTTSGGGGGSEETTTTEEEE---CSCHHHHHHHHHHHHHSSBCCCTTSCHHH
T ss_pred CEEEEEECCEEEEeeHHHHhcCCC---eeecccCCcccccCCCCeEEE---eCCcHHHHHHHHHHhcCCcCCCCCcCHHH
Confidence 35778885 38888888876432 2333311 1123456777 67999999999999999998765235899
Q ss_pred HHHHHhhcchhhH
Q 011762 142 VLMAADKFEVASC 154 (478)
Q Consensus 142 lL~aA~~l~i~~L 154 (478)
+++-|++|+|+.+
T Consensus 109 l~eEa~fy~i~~l 121 (140)
T 2nz0_B 109 YDDELAFYGILPE 121 (140)
T ss_dssp HHHHHHHHTCCGG
T ss_pred HHHHHHHcCCChH
Confidence 9999999999987
No 54
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=94.45 E-value=0.023 Score=45.39 Aligned_cols=83 Identities=11% Similarity=0.059 Sum_probs=57.7
Q ss_pred EEEEEe--eEEeehhhhhcCC-HHHHHhhcC-CCCCCCCceEEEecCCCcHHHHHHHHHHHcc-CceecCccchHHHHHH
Q 011762 70 TVLRVK--TVHISSPILAAKS-PFFYKLFSN-GMRESEQRYVTLRIHASEEAALMELLNFMYS-STLSTTTPTALLDVLM 144 (478)
Q Consensus 70 V~l~v~--~f~aHr~vLaa~S-~yF~~mf~~-~~~es~~~~i~l~~~~v~~~~f~~lL~fiYt-g~i~i~~~~~v~~lL~ 144 (478)
|+|.|+ .|...+..|+..- ..+.+|+.. .......+++-+ +-++..|+.||+|+-+ |++.++..-.+..+++
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi---DRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~ 79 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF---DRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSE 79 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE---CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE---cCChHHHHHHHHHHhcCCcccCCCCCCHHHHHH
Confidence 567784 3788888776542 123333321 011123467777 6789999999999999 8998765345789999
Q ss_pred HHhhcchhhHH
Q 011762 145 AADKFEVASCM 155 (478)
Q Consensus 145 aA~~l~i~~L~ 155 (478)
-|.+|+|+++.
T Consensus 80 Ea~fy~i~~~~ 90 (100)
T 1t1d_A 80 EIKFYELGENA 90 (100)
T ss_dssp HHHHTTCCHHH
T ss_pred HHHHcCCCHHH
Confidence 99999998754
No 55
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=77.83 E-value=10 Score=35.41 Aligned_cols=94 Identities=9% Similarity=0.115 Sum_probs=66.5
Q ss_pred cCccchHHHHHHHHhhcchhhHHHHHHHhhhcC-----------CCCHHhHHHHHhccchhhhhhchHHHHHHHHHHHHH
Q 011762 133 TTTPTALLDVLMAADKFEVASCMRYCSRLLRNL-----------PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAA 201 (478)
Q Consensus 133 i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~~~-----------~l~~~n~l~i~~~A~~~~~~~~~~~L~~~~~~fI~~ 201 (478)
++. +|+..++..|..++++.|.+.|.+|+.+. .++.+....++.--... ...-.++.+++.+|+..
T Consensus 139 l~~-~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~~~~l~~lL~~d~L~--v~sE~~vf~av~~W~~~ 215 (279)
T 3i3n_A 139 LHL-SNCVAIHSLAHMYTLSQLALKAADMIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEIT--VDSEEVLFETVLKWVQR 215 (279)
T ss_dssp CCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHHTHHHHTTSSGGGGSCHHHHHHHHTCSSCC--CSCHHHHHHHHHHHHHT
T ss_pred CCc-chHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhcCcChhcCCHHHHHHHhcCcCCC--CCCHHHHHHHHHHHHHc
Confidence 555 89999999999999999999999998761 34455555555432210 11245788888999865
Q ss_pred c-------HHHHhccchhhhcCCHHHHHHhhcCCCC
Q 011762 202 R-------YKDISKFQEEVLNLPLAGIEAVLASDDL 230 (478)
Q Consensus 202 n-------f~~v~~~s~~fl~L~~~~l~~lL~~d~L 230 (478)
+ +.++.. .-.|..++.+.+...+..+.+
T Consensus 216 ~~~~r~~~~~~ll~-~VRf~l~~~~~L~~~v~~~~l 250 (279)
T 3i3n_A 216 NAEERERYFEELFK-LLRLSQMKPTYLTRHVKPERL 250 (279)
T ss_dssp THHHHTTTHHHHHT-TSCGGGSCHHHHHHTTTTSHH
T ss_pred CHHHHHHHHHHHHH-hcCCCCCCHHHHHHHhhccch
Confidence 4 445555 556778999999888876655
No 56
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.34 E-value=3.2 Score=32.79 Aligned_cols=32 Identities=13% Similarity=0.122 Sum_probs=29.3
Q ss_pred ecCccchHHHHHHHHhhcchhhHHHHHHHhhhc
Q 011762 132 STTTPTALLDVLMAADKFEVASCMRYCSRLLRN 164 (478)
Q Consensus 132 ~i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~~ 164 (478)
.++. +|...++..|+.|+++.|.+.|.+|+.+
T Consensus 7 ~L~~-~NCl~i~~~A~~~~~~~L~~~a~~fi~~ 38 (105)
T 2eqx_A 7 GVQV-GNCLQVMWLADRHSDPELYTAAKHCAKT 38 (105)
T ss_dssp CCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cCCH-HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4565 8999999999999999999999999987
No 57
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=63.98 E-value=5.6 Score=41.08 Aligned_cols=84 Identities=10% Similarity=0.019 Sum_probs=56.4
Q ss_pred cEEEEEe--eEEeehhhhhcCCHH-HHHhhcC-CCCCCCCceEEEecCCCcHHHHHHHHHHHcc-CceecCccchHHHHH
Q 011762 69 STVLRVK--TVHISSPILAAKSPF-FYKLFSN-GMRESEQRYVTLRIHASEEAALMELLNFMYS-STLSTTTPTALLDVL 143 (478)
Q Consensus 69 DV~l~v~--~f~aHr~vLaa~S~y-F~~mf~~-~~~es~~~~i~l~~~~v~~~~f~~lL~fiYt-g~i~i~~~~~v~~lL 143 (478)
=|+|.|+ .|...+..|+..-+- +..++.. .......+++-+ |=++..|+.||+|+.| |++.++..-.+..++
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~---DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~ 129 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF---DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFS 129 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE---CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHH
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE---cCChHHHHHHHHHHhcCCccccCCcccHHHHH
Confidence 4567775 378888777643211 1111110 111123456777 6799999999999999 999876533567889
Q ss_pred HHHhhcchhhHH
Q 011762 144 MAADKFEVASCM 155 (478)
Q Consensus 144 ~aA~~l~i~~L~ 155 (478)
+-|.+|+++++.
T Consensus 130 ~E~~f~~i~~~~ 141 (514)
T 2r9r_B 130 EEIRFYELGEEA 141 (514)
T ss_dssp HHHHHTTCCHHH
T ss_pred HHHHhcCCCHHH
Confidence 999999998765
No 58
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=56.10 E-value=6.6 Score=30.68 Aligned_cols=33 Identities=18% Similarity=0.268 Sum_probs=29.6
Q ss_pred CCCHHhHHHHHhccchhhhhhchHHHHHHHHHHHHHc
Q 011762 166 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAAR 202 (478)
Q Consensus 166 ~l~~~n~l~i~~~A~~~~~~~~~~~L~~~~~~fI~~n 202 (478)
.++.+|+..++..|..+ +++.|.+.|.+|+.++
T Consensus 76 ~~~~~~~~~ll~~A~~~----~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 76 DLEADTVLATLYAAKKY----IVPALAKACVNFLETS 108 (109)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHh----CcHHHHHHHHHHHHhh
Confidence 57889999999999865 8999999999999876
No 59
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=55.26 E-value=8.5 Score=32.77 Aligned_cols=33 Identities=9% Similarity=0.102 Sum_probs=29.6
Q ss_pred cCccchHHHHHHHHhhcchhhHHHHHHHhhhcCCC
Q 011762 133 TTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPM 167 (478)
Q Consensus 133 i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~~~~l 167 (478)
++. +|+.+++..|..++++.|++.|.+|+.+ ++
T Consensus 132 l~~-~n~~~~~~~A~~~~~~~L~~~~~~~i~~-~~ 164 (172)
T 3htm_A 132 LSV-ENAAEILILADLHSADQLKTQAVDFINY-HA 164 (172)
T ss_dssp CCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-TC
T ss_pred CCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH-HH
Confidence 454 7999999999999999999999999988 44
No 60
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=54.84 E-value=5 Score=37.03 Aligned_cols=31 Identities=6% Similarity=0.038 Sum_probs=28.1
Q ss_pred cCccchHHHHHHHHhhcchhhHHHHHHHhhhc
Q 011762 133 TTTPTALLDVLMAADKFEVASCMRYCSRLLRN 164 (478)
Q Consensus 133 i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~~ 164 (478)
++. +|+..++..|+.++++.|.+.|.+|+.+
T Consensus 131 l~~-~n~~~i~~~A~~~~~~~L~~~~~~~i~~ 161 (256)
T 3hve_A 131 IAA-ENCIGIRDFALHYCLHHVHYLATEYLET 161 (256)
T ss_dssp CCS-STTHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCH-hhHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 454 7999999999999999999999999876
No 61
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=44.58 E-value=14 Score=34.94 Aligned_cols=33 Identities=9% Similarity=0.102 Sum_probs=29.6
Q ss_pred cCccchHHHHHHHHhhcchhhHHHHHHHhhhcCCC
Q 011762 133 TTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPM 167 (478)
Q Consensus 133 i~~~~~v~~lL~aA~~l~i~~L~~~C~~~L~~~~l 167 (478)
++. +|+..++.+|+.++++.|++.|.+|+.. ++
T Consensus 272 ~~~-~n~~~~l~~A~~~~~~~L~~~~~~~i~~-~~ 304 (312)
T 3hqi_A 272 LSV-ENAAEILILADLHSADQLKTQAVDFINY-HA 304 (312)
T ss_dssp CCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-TC
T ss_pred CCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHH-HH
Confidence 454 7999999999999999999999999988 54
No 62
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=40.07 E-value=18 Score=29.09 Aligned_cols=33 Identities=12% Similarity=0.262 Sum_probs=29.1
Q ss_pred CCCHHhHHHHHhccchhhhhhchHHHHHHHHHHHHHc
Q 011762 166 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAAR 202 (478)
Q Consensus 166 ~l~~~n~l~i~~~A~~~~~~~~~~~L~~~~~~fI~~n 202 (478)
.++.+|+..++..|..+ .+..|.+.|.+|+.++
T Consensus 94 ~~~~~~~~~ll~~A~~~----~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 94 NLREGNIMAVMATAMYL----QMEHVVDTCRKFIKAS 126 (127)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHHHHh----CCHHHHHHHHHHHHhc
Confidence 57889999999999865 8999999999999765
No 63
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=35.80 E-value=11 Score=30.97 Aligned_cols=38 Identities=11% Similarity=0.048 Sum_probs=28.3
Q ss_pred CCCHHhHHHHHhccchhhhhhchHHHHHHHHHHHHHcHHHHh
Q 011762 166 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDIS 207 (478)
Q Consensus 166 ~l~~~n~l~i~~~A~~~~~~~~~~~L~~~~~~fI~~nf~~v~ 207 (478)
.++.+|+..++..|..+ .+..|.+.|.+|+.+++..-.
T Consensus 86 ~i~~~~v~~ll~~A~~l----~i~~L~~~C~~~l~~~l~~~~ 123 (135)
T 2yy9_A 86 ALTSGNRDQVLLAAKEL----RVPEAVELCQSFQPQTSVGQA 123 (135)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHCCC-------
T ss_pred CCCHHHHHHHHHHHHHh----CcHHHHHHHHHHHHHhccCCC
Confidence 57889999999999865 899999999999998876543
No 64
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=31.10 E-value=38 Score=26.85 Aligned_cols=33 Identities=12% Similarity=0.074 Sum_probs=28.8
Q ss_pred CCCHHhHHHHHhccchhhhhhchHHHHHHHHHHHHHc
Q 011762 166 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAAR 202 (478)
Q Consensus 166 ~l~~~n~l~i~~~A~~~~~~~~~~~L~~~~~~fI~~n 202 (478)
.++.+|+..++..|+.+ ..+.|.+.|.+|+.+.
T Consensus 88 ~~~~~~~~~ll~~A~~~----~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 88 QAKAEDLDDLLYAAEIL----EIEYLEEQCLKMLETI 120 (121)
T ss_dssp CCCGGGHHHHHHHHHHH----TCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH----CCHHHHHHHHHHHHHh
Confidence 57889999999999865 8999999999998753
No 65
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=30.82 E-value=26 Score=27.49 Aligned_cols=31 Identities=6% Similarity=-0.008 Sum_probs=27.5
Q ss_pred CCCHHhHHHHHhccchhhhhhchHHHHHHHHHHHH
Q 011762 166 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLA 200 (478)
Q Consensus 166 ~l~~~n~l~i~~~A~~~~~~~~~~~L~~~~~~fI~ 200 (478)
.++.+|+..++..|..+ ++..|.+.|.+|+.
T Consensus 85 ~~~~~~v~~ll~~A~~~----~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 85 NLDSWNVKEIHQAADYL----KVEEVVTKCKIKME 115 (116)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHHh
Confidence 57889999999999865 89999999999985
No 66
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=30.12 E-value=32 Score=27.27 Aligned_cols=31 Identities=10% Similarity=0.126 Sum_probs=27.4
Q ss_pred CCCHHhHHHHHhccchhhhhhchHHHHHHHHHHHH
Q 011762 166 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLA 200 (478)
Q Consensus 166 ~l~~~n~l~i~~~A~~~~~~~~~~~L~~~~~~fI~ 200 (478)
.++.+|+..++..|..+ .+..|.+.|.+|+.
T Consensus 87 ~i~~~~~~~ll~~A~~l----~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 87 SLSPENVDDVLAVATFL----QMQDIITACHALKS 117 (119)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHHh
Confidence 57889999999999865 89999999999984
No 67
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=29.82 E-value=18 Score=28.76 Aligned_cols=33 Identities=12% Similarity=0.088 Sum_probs=27.0
Q ss_pred CCCHHhHHHHHhccchhhhhhchHHHHHHHHHHHHHc
Q 011762 166 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAAR 202 (478)
Q Consensus 166 ~l~~~n~l~i~~~A~~~~~~~~~~~L~~~~~~fI~~n 202 (478)
.++.+|+..++..|+.+ ....|.+.|.+|+.++
T Consensus 85 ~~~~~~v~~ll~~A~~~----~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 85 ALTSGNRDQVLLAAREL----RVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHCC---
T ss_pred ccCHHHHHHHHHHHHHh----CcHHHHHHHHHHHHHc
Confidence 57889999999999865 8999999999998765
No 68
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=29.36 E-value=13 Score=30.59 Aligned_cols=35 Identities=11% Similarity=0.139 Sum_probs=30.6
Q ss_pred CCCHHhHHHHHhccchhhhhhchHHHHHHHHHHHHHcHH
Q 011762 166 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYK 204 (478)
Q Consensus 166 ~l~~~n~l~i~~~A~~~~~~~~~~~L~~~~~~fI~~nf~ 204 (478)
.++.+|+..++..|..+ .+..|.+.|.+|+.+++.
T Consensus 100 ~i~~~~v~~ll~~A~~~----~i~~L~~~C~~~l~~~l~ 134 (138)
T 2z8h_A 100 ILSKDNVDEVCRCVEFL----SVHNIEESCFQFLKFKFL 134 (138)
T ss_dssp CCCTTTHHHHHHHHHHH----TCGGGHHHHHHHTTCCCS
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHhcc
Confidence 57889999999999865 899999999999987754
No 69
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=27.39 E-value=1.8e+02 Score=24.25 Aligned_cols=55 Identities=11% Similarity=0.079 Sum_probs=41.6
Q ss_pred HHHHHhhhcCCCCHHhHHHHHhccchhhhhhchHHHHHHHHHHHHHcHHHHhccchhhhcCCHHHHHHhhcC
Q 011762 156 RYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLAS 227 (478)
Q Consensus 156 ~~C~~~L~~~~l~~~n~l~i~~~A~~~~~~~~~~~L~~~~~~fI~~nf~~v~~~s~~fl~L~~~~l~~lL~~ 227 (478)
+...+|+ .++.++++.++..|... +...|.+.|.+|++..+. .-+.+++..++.-
T Consensus 86 ~wD~~F~---~id~~~l~eLl~AAnyL----~I~~Lld~~c~~va~~i~----------gkt~eeir~~f~I 140 (159)
T 2ast_A 86 VWDQEFL---KVDQGTLFELILAANYL----DIKGLLDVTCKTVANMIK----------GKTPEEIRKTFNI 140 (159)
T ss_dssp HHHHHHT---CSCHHHHHHHHHHHHHH----TCHHHHHHHHHHHHHHHS----------SCCHHHHHHHTTC
T ss_pred HHHHHHH---cCCHHHHHHHHHHHHHH----hHHHHHHHHHHHHHHHHc----------CCCHHHHHHHcCC
Confidence 3444555 48999999999988754 899999999999876532 3467888888774
No 70
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=25.95 E-value=48 Score=26.02 Aligned_cols=30 Identities=7% Similarity=0.131 Sum_probs=26.6
Q ss_pred CCCHHhHHHHHhccchhhhhhchHHHHHHHHHHH
Q 011762 166 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFL 199 (478)
Q Consensus 166 ~l~~~n~l~i~~~A~~~~~~~~~~~L~~~~~~fI 199 (478)
.++.+|+..++..|..+ .+..|.+.|.+|+
T Consensus 90 ~~~~~~~~~ll~~A~~~----~i~~L~~~C~~~L 119 (120)
T 2if5_A 90 TVSTANVGDILSAARLL----EIPAVSHVCADLL 119 (120)
T ss_dssp CCCGGGHHHHHHHHHHT----TCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHh
Confidence 57889999999999865 8999999999986
No 71
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=24.57 E-value=2.9e+02 Score=25.05 Aligned_cols=93 Identities=10% Similarity=-0.020 Sum_probs=55.2
Q ss_pred eeEeeeccc---ceEEEecCCCCeEEE---ccccccceeeeecCCeeeeccceecccc-----cccccc-e--eeccCCc
Q 011762 327 ERAYKYRPV---KVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG-----FFLSAH-C--NMDQQSS 392 (478)
Q Consensus 327 ~~i~~~~~~---~~v~~y~p~~~~W~~---l~~~r~~~~~~~~~~~iY~~~~v~GG~~-----~~~~~~-~--~m~~~R~ 392 (478)
+.+|...+. ..+..+|+.+++-.. ++......|++..+++|| ++...+ +...+. . -...+..
T Consensus 31 ~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly----~ltw~~~~v~v~D~~tl~~~~ti~~~~~ 106 (243)
T 3mbr_X 31 GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLI----QLTWRNHEGFVYDLATLTPRARFRYPGE 106 (243)
T ss_dssp TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEE----EEESSSSEEEEEETTTTEEEEEEECSSC
T ss_pred CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEE----EEEeeCCEEEEEECCcCcEEEEEeCCCC
Confidence 346665444 589999999988766 555555678899999999 776441 111100 0 0344445
Q ss_pred eeEEEEEeceec--cCCcceeeeceeeeeecC-CcceeccC
Q 011762 393 FHCFGLFLGMQE--KGSVSFAVDYEFAARIKP-TEEYVSKY 430 (478)
Q Consensus 393 ~~~~~~l~g~l~--~~~~~s~v~~~~~E~Ydp-~W~~v~~m 430 (478)
..+++.-++.|+ +| +..+ -.+|| +=+.+...
T Consensus 107 Gwglt~dg~~L~vSdg--s~~l-----~~iDp~t~~~~~~I 140 (243)
T 3mbr_X 107 GWALTSDDSHLYMSDG--TAVI-----RKLDPDTLQQVGSI 140 (243)
T ss_dssp CCEEEECSSCEEEECS--SSEE-----EEECTTTCCEEEEE
T ss_pred ceEEeeCCCEEEEECC--CCeE-----EEEeCCCCeEEEEE
Confidence 677776666663 33 2334 66788 44444433
No 72
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=20.97 E-value=34 Score=19.49 Aligned_cols=14 Identities=36% Similarity=0.337 Sum_probs=12.0
Q ss_pred chHHHHHHHHhhcc
Q 011762 137 TALLDVLMAADKFE 150 (478)
Q Consensus 137 ~~v~~lL~aA~~l~ 150 (478)
.|++-||+||.++.
T Consensus 3 ~nvq~LLeAAeyLE 16 (26)
T 1pd7_B 3 MNIQMLLEAADYLE 16 (26)
T ss_dssp CSTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH
Confidence 47899999999875
Done!