Query 011763
Match_columns 478
No_of_seqs 429 out of 3179
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 04:57:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011763.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011763hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0600 Cdc2-related protein k 100.0 4.8E-79 1E-83 596.0 31.5 378 90-467 77-454 (560)
2 KOG0663 Protein kinase PITSLRE 100.0 1.1E-63 2.4E-68 465.7 18.7 311 129-441 75-389 (419)
3 KOG0659 Cdk activating kinase 100.0 1E-61 2.2E-66 440.1 22.1 299 130-433 2-301 (318)
4 KOG0593 Predicted protein kina 100.0 9.8E-61 2.1E-65 440.5 18.6 286 130-418 2-289 (396)
5 KOG0661 MAPK related serine/th 100.0 5.6E-61 1.2E-65 466.1 15.2 287 129-419 9-297 (538)
6 KOG0615 Serine/threonine prote 100.0 7.6E-59 1.6E-63 444.1 14.1 265 129-422 171-446 (475)
7 KOG0575 Polo-like serine/threo 100.0 5.4E-57 1.2E-61 451.6 24.7 257 130-419 18-275 (592)
8 KOG0598 Ribosomal protein S6 k 100.0 2.8E-56 6.2E-61 423.6 19.6 262 129-422 24-290 (357)
9 KOG0660 Mitogen-activated prot 100.0 2.8E-56 6.1E-61 422.0 18.6 294 130-424 22-321 (359)
10 KOG0594 Protein kinase PCTAIRE 100.0 5E-55 1.1E-59 414.9 22.4 293 129-422 10-311 (323)
11 KOG0605 NDR and related serine 100.0 1.9E-54 4.2E-59 426.9 21.9 279 125-433 136-465 (550)
12 KOG0581 Mitogen-activated prot 100.0 1.8E-54 3.8E-59 411.5 19.6 258 129-420 78-342 (364)
13 KOG0592 3-phosphoinositide-dep 100.0 3.8E-54 8.2E-59 424.5 19.2 263 129-423 72-348 (604)
14 KOG0033 Ca2+/calmodulin-depend 100.0 6.3E-56 1.4E-60 397.6 5.3 289 129-452 10-301 (355)
15 KOG0658 Glycogen synthase kina 100.0 3.7E-54 8E-59 408.4 16.1 280 131-419 25-312 (364)
16 KOG0616 cAMP-dependent protein 100.0 1.2E-53 2.7E-58 392.8 17.9 261 127-423 41-307 (355)
17 KOG0610 Putative serine/threon 100.0 5.3E-52 1.2E-56 397.7 25.2 276 126-431 73-410 (459)
18 KOG0595 Serine/threonine-prote 100.0 4.1E-52 9E-57 398.4 21.8 261 129-420 9-275 (429)
19 KOG0667 Dual-specificity tyros 100.0 1.2E-51 2.5E-56 417.5 23.3 281 131-421 187-510 (586)
20 KOG0585 Ca2+/calmodulin-depend 100.0 2.6E-51 5.7E-56 398.2 23.0 264 129-419 96-378 (576)
21 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.2E-50 2.5E-55 396.9 27.6 283 129-416 4-288 (288)
22 KOG0583 Serine/threonine prote 100.0 1.3E-50 2.8E-55 405.7 25.9 257 129-418 16-280 (370)
23 KOG0694 Serine/threonine prote 100.0 6.8E-51 1.5E-55 412.1 23.2 265 125-423 363-634 (694)
24 KOG0662 Cyclin-dependent kinas 100.0 3.1E-51 6.8E-56 351.8 16.7 285 130-418 2-288 (292)
25 KOG0588 Serine/threonine prote 100.0 3.3E-51 7.2E-56 411.3 19.3 257 131-420 13-270 (786)
26 cd07848 STKc_CDKL5 Catalytic d 100.0 7.5E-50 1.6E-54 390.4 26.8 284 130-416 1-287 (287)
27 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.9E-49 4.1E-54 391.1 27.4 288 129-420 4-295 (303)
28 KOG0597 Serine-threonine prote 100.0 3.9E-50 8.5E-55 396.3 17.8 258 130-421 2-259 (808)
29 cd07845 STKc_CDK10 Catalytic d 100.0 1.4E-48 3E-53 386.0 28.4 303 129-432 6-309 (309)
30 KOG0591 NIMA (never in mitosis 100.0 4.8E-51 1E-55 373.0 8.7 250 129-407 18-275 (375)
31 KOG0599 Phosphorylase kinase g 100.0 2.2E-50 4.8E-55 367.0 12.7 263 129-420 16-290 (411)
32 KOG0578 p21-activated serine/t 100.0 1E-49 2.2E-54 396.3 18.3 257 129-418 272-528 (550)
33 KOG0666 Cyclin C-dependent kin 100.0 3.8E-50 8.3E-55 371.4 13.5 293 129-422 23-346 (438)
34 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.6E-48 5.5E-53 384.1 27.1 288 129-420 5-293 (309)
35 KOG1290 Serine/threonine prote 100.0 1.7E-48 3.7E-53 379.5 25.1 312 80-422 50-559 (590)
36 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.6E-48 5.5E-53 388.5 26.9 290 131-421 1-298 (338)
37 PTZ00284 protein kinase; Provi 100.0 1.6E-47 3.5E-52 399.6 33.0 283 129-421 128-446 (467)
38 cd07862 STKc_CDK6 Catalytic do 100.0 5.7E-48 1.2E-52 377.7 26.1 280 131-416 2-290 (290)
39 PTZ00036 glycogen synthase kin 100.0 4.6E-48 1E-52 400.0 26.8 284 129-421 65-359 (440)
40 cd07876 STKc_JNK2 Catalytic do 100.0 8.2E-48 1.8E-52 388.7 27.3 288 129-422 20-324 (359)
41 cd07853 STKc_NLK Catalytic dom 100.0 3E-48 6.5E-53 393.7 24.2 288 131-419 1-294 (372)
42 KOG0198 MEKK and related serin 100.0 7.9E-49 1.7E-53 378.6 18.9 261 130-419 17-282 (313)
43 KOG0582 Ste20-like serine/thre 100.0 2.9E-48 6.3E-53 374.8 22.6 271 127-419 23-299 (516)
44 PHA03212 serine/threonine kina 100.0 7.4E-48 1.6E-52 392.6 25.6 284 127-422 89-385 (391)
45 cd07875 STKc_JNK1 Catalytic do 100.0 2.2E-47 4.8E-52 386.2 27.9 288 129-422 23-327 (364)
46 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.8E-47 6E-52 375.2 27.3 286 129-418 5-291 (301)
47 KOG0032 Ca2+/calmodulin-depend 100.0 1.3E-47 2.8E-52 384.0 24.8 264 129-423 34-303 (382)
48 cd05612 STKc_PRKX_like Catalyt 100.0 7.6E-48 1.6E-52 377.6 22.4 256 130-421 1-262 (291)
49 KOG0580 Serine/threonine prote 100.0 7.1E-49 1.5E-53 351.6 13.1 255 129-418 21-278 (281)
50 PTZ00263 protein kinase A cata 100.0 8.1E-48 1.7E-52 384.1 22.1 257 129-421 17-279 (329)
51 cd07863 STKc_CDK4 Catalytic do 100.0 4.9E-47 1.1E-51 370.6 26.9 281 131-416 1-288 (288)
52 KOG0669 Cyclin T-dependent kin 100.0 7.1E-50 1.5E-54 359.9 6.1 294 129-422 16-324 (376)
53 cd07861 STKc_CDK1_euk Catalyti 100.0 6.6E-47 1.4E-51 368.9 26.5 283 131-416 1-285 (285)
54 cd07839 STKc_CDK5 Catalytic do 100.0 4E-47 8.6E-52 370.4 24.8 283 131-416 1-284 (284)
55 cd05628 STKc_NDR1 Catalytic do 100.0 3E-47 6.6E-52 385.1 24.3 265 130-423 1-303 (363)
56 cd05571 STKc_PKB Catalytic dom 100.0 1.6E-47 3.5E-52 380.9 21.4 253 136-421 1-259 (323)
57 KOG0611 Predicted serine/threo 100.0 3E-48 6.6E-53 369.5 15.2 255 129-417 52-307 (668)
58 cd07874 STKc_JNK3 Catalytic do 100.0 7.8E-47 1.7E-51 380.9 26.3 287 129-421 16-319 (355)
59 cd07878 STKc_p38beta_MAPK11 Ca 100.0 6.5E-47 1.4E-51 379.6 25.3 285 129-419 14-304 (343)
60 cd05599 STKc_NDR_like Catalyti 100.0 3E-47 6.4E-52 385.2 23.0 264 130-422 1-305 (364)
61 cd05631 STKc_GRK4 Catalytic do 100.0 5.8E-47 1.3E-51 370.1 23.7 261 131-421 1-269 (285)
62 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 4.1E-47 8.9E-52 379.6 23.1 263 131-421 2-265 (333)
63 PTZ00426 cAMP-dependent protei 100.0 3.9E-47 8.4E-52 380.6 21.7 259 128-422 28-293 (340)
64 cd07868 STKc_CDK8 Catalytic do 100.0 1.4E-46 3E-51 372.8 25.3 278 135-416 6-317 (317)
65 cd05601 STKc_CRIK Catalytic do 100.0 3.7E-47 8E-52 379.4 20.9 266 130-423 1-273 (330)
66 cd05573 STKc_ROCK_NDR_like Cat 100.0 3.4E-47 7.3E-52 382.5 20.6 265 130-423 1-295 (350)
67 cd05626 STKc_LATS2 Catalytic d 100.0 1.5E-46 3.3E-51 382.4 24.2 263 131-421 2-313 (381)
68 KOG4717 Serine/threonine prote 100.0 4.5E-47 9.7E-52 370.7 19.1 258 131-421 19-278 (864)
69 cd05598 STKc_LATS Catalytic do 100.0 5.8E-47 1.3E-51 384.8 20.8 262 131-421 2-309 (376)
70 KOG0690 Serine/threonine prote 100.0 1.6E-47 3.5E-52 355.7 14.7 262 128-422 166-433 (516)
71 cd05625 STKc_LATS1 Catalytic d 100.0 1.1E-46 2.5E-51 383.5 22.3 262 131-421 2-313 (382)
72 cd05596 STKc_ROCK Catalytic do 100.0 1.6E-46 3.6E-51 380.5 23.1 268 127-422 40-313 (370)
73 cd05595 STKc_PKB_beta Catalyti 100.0 2E-46 4.4E-51 373.0 23.1 253 136-421 1-259 (323)
74 cd07832 STKc_CCRK Catalytic do 100.0 1.1E-45 2.4E-50 360.3 27.8 285 131-417 1-286 (286)
75 cd05629 STKc_NDR_like_fungal C 100.0 1.2E-46 2.6E-51 382.6 21.6 263 130-421 1-313 (377)
76 PLN00034 mitogen-activated pro 100.0 3.5E-45 7.5E-50 368.7 32.0 261 129-422 73-337 (353)
77 cd05593 STKc_PKB_gamma Catalyt 100.0 2E-46 4.3E-51 373.9 22.4 253 136-421 1-259 (328)
78 KOG0201 Serine/threonine prote 100.0 9E-48 2E-52 371.2 11.5 257 129-418 12-268 (467)
79 cd05585 STKc_YPK1_like Catalyt 100.0 2.4E-46 5.3E-51 370.6 22.0 250 138-420 1-254 (312)
80 cd07841 STKc_CDK7 Catalytic do 100.0 2.4E-45 5.1E-50 360.6 28.7 291 131-425 1-294 (298)
81 cd06649 PKc_MEK2 Catalytic dom 100.0 1.7E-45 3.7E-50 367.6 28.0 281 128-419 3-307 (331)
82 cd05614 STKc_MSK2_N N-terminal 100.0 2.4E-46 5.3E-51 373.8 21.5 264 131-421 1-275 (332)
83 KOG0192 Tyrosine kinase specif 100.0 6E-46 1.3E-50 368.9 24.1 252 129-411 40-297 (362)
84 cd05621 STKc_ROCK2 Catalytic d 100.0 5.4E-46 1.2E-50 376.5 23.6 267 127-421 40-312 (370)
85 cd07860 STKc_CDK2_3 Catalytic 100.0 1.1E-45 2.4E-50 360.2 24.8 282 131-416 1-284 (284)
86 PHA03209 serine/threonine kina 100.0 2.2E-45 4.7E-50 370.6 27.2 277 129-418 65-356 (357)
87 cd05587 STKc_cPKC Catalytic do 100.0 1E-45 2.2E-50 368.2 24.0 258 131-421 1-265 (324)
88 cd05627 STKc_NDR2 Catalytic do 100.0 3.3E-46 7.1E-51 377.1 20.7 265 130-423 1-303 (360)
89 cd07843 STKc_CDC2L1 Catalytic 100.0 1.8E-45 3.9E-50 360.7 25.0 287 129-416 4-293 (293)
90 cd05589 STKc_PKN Catalytic dom 100.0 1.3E-45 2.9E-50 367.3 24.4 256 132-421 1-265 (324)
91 KOG0986 G protein-coupled rece 100.0 1.1E-46 2.3E-51 363.9 15.4 319 97-445 151-481 (591)
92 cd05590 STKc_nPKC_eta Catalyti 100.0 6.6E-46 1.4E-50 368.9 21.6 253 136-421 1-261 (320)
93 PHA03207 serine/threonine kina 100.0 6.3E-45 1.4E-49 371.8 28.5 281 129-422 91-384 (392)
94 cd07866 STKc_BUR1 Catalytic do 100.0 4.9E-45 1.1E-49 360.0 26.8 288 129-416 7-311 (311)
95 cd07850 STKc_JNK Catalytic dom 100.0 6.5E-45 1.4E-49 366.7 28.1 287 129-421 15-319 (353)
96 cd05594 STKc_PKB_alpha Catalyt 100.0 3.9E-46 8.4E-51 371.3 19.0 253 136-421 1-260 (325)
97 cd05616 STKc_cPKC_beta Catalyt 100.0 1.8E-45 3.9E-50 366.2 23.6 258 131-421 1-265 (323)
98 cd05597 STKc_DMPK_like Catalyt 100.0 1.9E-45 4E-50 367.3 23.8 268 130-423 1-276 (331)
99 cd07867 STKc_CDC2L6 Catalytic 100.0 3.8E-45 8.2E-50 362.3 25.7 277 136-416 7-317 (317)
100 cd07864 STKc_CDK12 Catalytic d 100.0 6.9E-45 1.5E-49 357.8 27.0 288 129-416 6-302 (302)
101 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.2E-44 2.5E-49 353.1 28.2 283 130-416 1-286 (286)
102 cd07844 STKc_PCTAIRE_like Cata 100.0 9.7E-45 2.1E-49 355.0 27.4 284 129-416 4-291 (291)
103 cd05622 STKc_ROCK1 Catalytic d 100.0 2.5E-45 5.3E-50 372.0 23.9 267 127-421 40-312 (371)
104 KOG0612 Rho-associated, coiled 100.0 6.2E-47 1.4E-51 399.1 12.5 277 127-433 72-358 (1317)
105 cd05584 STKc_p70S6K Catalytic 100.0 4.1E-45 8.9E-50 363.6 25.0 254 135-421 1-264 (323)
106 cd05591 STKc_nPKC_epsilon Cata 100.0 1.3E-45 2.7E-50 367.0 21.2 253 136-421 1-262 (321)
107 cd07831 STKc_MOK Catalytic dom 100.0 9.3E-45 2E-49 353.0 26.6 281 132-416 1-282 (282)
108 cd05605 STKc_GRK4_like Catalyt 100.0 5E-45 1.1E-49 356.5 23.9 262 131-422 1-270 (285)
109 cd05592 STKc_nPKC_theta_delta 100.0 2.8E-45 6.2E-50 363.7 22.3 253 136-421 1-256 (316)
110 cd05608 STKc_GRK1 Catalytic do 100.0 4.2E-45 9.2E-50 356.1 23.1 256 138-422 1-266 (280)
111 PLN00009 cyclin-dependent kina 100.0 1.8E-44 3.9E-49 353.8 27.3 287 130-420 2-291 (294)
112 cd05620 STKc_nPKC_delta Cataly 100.0 3.5E-45 7.6E-50 363.0 22.3 253 136-421 1-256 (316)
113 cd07840 STKc_CDK9_like Catalyt 100.0 1.7E-44 3.7E-49 351.6 26.6 285 132-416 1-287 (287)
114 cd07833 STKc_CDKL Catalytic do 100.0 2.2E-44 4.8E-49 351.4 27.1 284 131-416 2-288 (288)
115 cd05570 STKc_PKC Catalytic dom 100.0 3.6E-45 7.9E-50 363.2 21.9 253 136-421 1-260 (318)
116 cd07836 STKc_Pho85 Catalytic d 100.0 1.7E-44 3.7E-49 351.7 26.1 282 131-416 1-284 (284)
117 cd07837 STKc_CdkB_plant Cataly 100.0 2.1E-44 4.5E-49 353.2 25.9 286 130-417 1-295 (295)
118 cd05575 STKc_SGK Catalytic dom 100.0 4E-45 8.6E-50 363.7 21.1 253 136-421 1-259 (323)
119 cd05588 STKc_aPKC Catalytic do 100.0 5.2E-45 1.1E-49 363.8 21.9 253 136-421 1-270 (329)
120 cd07846 STKc_CDKL2_3 Catalytic 100.0 2E-44 4.3E-49 351.6 25.3 284 130-416 1-286 (286)
121 cd05582 STKc_RSK_N N-terminal 100.0 1.6E-45 3.4E-50 365.8 17.7 254 135-421 1-262 (318)
122 cd05615 STKc_cPKC_alpha Cataly 100.0 1.2E-44 2.5E-49 360.4 24.0 258 131-421 1-265 (323)
123 cd07865 STKc_CDK9 Catalytic do 100.0 4E-44 8.7E-49 353.4 27.2 288 129-416 11-310 (310)
124 cd07870 STKc_PFTAIRE2 Catalyti 100.0 7.1E-44 1.5E-48 349.0 28.6 284 129-416 4-291 (291)
125 KOG0589 Serine/threonine prote 100.0 1.2E-45 2.6E-50 365.3 15.9 258 129-417 3-262 (426)
126 PHA03211 serine/threonine kina 100.0 8.2E-44 1.8E-48 368.0 30.0 277 129-418 168-460 (461)
127 cd07835 STKc_CDK1_like Catalyt 100.0 3.7E-44 8.1E-49 349.3 26.0 281 132-416 1-283 (283)
128 cd05623 STKc_MRCK_alpha Cataly 100.0 1.1E-44 2.5E-49 361.8 22.5 266 130-421 1-274 (332)
129 cd05618 STKc_aPKC_iota Catalyt 100.0 1E-44 2.2E-49 361.7 22.1 253 136-421 1-270 (329)
130 KOG0607 MAP kinase-interacting 100.0 1.4E-45 3.1E-50 342.2 14.3 266 132-426 79-374 (463)
131 PF00069 Pkinase: Protein kina 100.0 1.2E-44 2.6E-49 347.6 21.2 260 132-416 1-260 (260)
132 cd05619 STKc_nPKC_theta Cataly 100.0 1.7E-44 3.7E-49 358.1 22.9 253 136-421 1-256 (316)
133 cd05624 STKc_MRCK_beta Catalyt 100.0 1.2E-44 2.6E-49 361.5 21.6 267 130-422 1-275 (331)
134 cd07855 STKc_ERK5 Catalytic do 100.0 2E-44 4.4E-49 360.3 23.2 292 130-422 5-303 (334)
135 cd06650 PKc_MEK1 Catalytic dom 100.0 4.7E-44 1E-48 357.5 25.5 280 129-419 4-305 (333)
136 cd07849 STKc_ERK1_2_like Catal 100.0 1E-43 2.2E-48 355.5 27.8 290 129-421 4-300 (336)
137 PTZ00024 cyclin-dependent prot 100.0 9.3E-44 2E-48 355.5 27.3 296 129-429 7-329 (335)
138 KOG0671 LAMMER dual specificit 100.0 1E-45 2.2E-50 351.4 11.4 280 129-418 88-411 (415)
139 cd05586 STKc_Sck1_like Catalyt 100.0 5.2E-45 1.1E-49 363.9 17.0 252 138-420 1-260 (330)
140 cd05602 STKc_SGK1 Catalytic do 100.0 1.9E-44 4.2E-49 359.1 20.5 252 136-420 1-258 (325)
141 cd06625 STKc_MEKK3_like Cataly 100.0 1.3E-43 2.8E-48 341.4 25.6 257 130-416 2-263 (263)
142 cd05604 STKc_SGK3 Catalytic do 100.0 1.3E-44 2.9E-49 360.2 19.3 253 136-421 1-259 (325)
143 PTZ00266 NIMA-related protein 100.0 7.2E-44 1.6E-48 386.2 26.5 262 128-419 11-301 (1021)
144 cd07858 STKc_TEY_MAPK_plant Ca 100.0 8.9E-44 1.9E-48 356.1 25.3 293 129-423 4-301 (337)
145 PTZ00283 serine/threonine prot 100.0 1E-43 2.2E-48 372.3 26.7 261 129-418 31-302 (496)
146 KOG0604 MAP kinase-activated p 100.0 1.5E-45 3.3E-50 339.5 10.7 256 129-419 60-328 (400)
147 cd05630 STKc_GRK6 Catalytic do 100.0 7.9E-44 1.7E-48 348.1 23.5 261 131-421 1-269 (285)
148 cd05603 STKc_SGK2 Catalytic do 100.0 3.7E-44 8E-49 356.4 21.5 253 136-421 1-259 (321)
149 cd05617 STKc_aPKC_zeta Catalyt 100.0 5.2E-44 1.1E-48 356.3 22.5 255 136-422 1-269 (327)
150 cd07852 STKc_MAPK15 Catalytic 100.0 1.3E-43 2.8E-48 354.8 24.7 289 129-419 6-301 (337)
151 cd05574 STKc_phototropin_like 100.0 3E-43 6.5E-48 348.8 26.7 267 130-426 1-302 (316)
152 cd07842 STKc_CDK8_like Catalyt 100.0 1.5E-43 3.3E-48 350.4 24.5 286 131-416 1-316 (316)
153 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.3E-43 9.4E-48 352.0 27.9 287 129-421 14-306 (343)
154 cd05118 STKc_CMGC Catalytic do 100.0 1.9E-43 4.2E-48 343.8 24.4 282 132-416 1-283 (283)
155 PTZ00267 NIMA-related protein 100.0 3.4E-43 7.3E-48 367.6 27.8 257 129-418 66-328 (478)
156 cd07834 STKc_MAPK Catalytic do 100.0 1.6E-43 3.4E-48 353.0 24.1 290 131-421 1-297 (330)
157 cd05632 STKc_GRK5 Catalytic do 100.0 2.8E-43 6E-48 344.2 25.0 261 131-421 1-269 (285)
158 cd07851 STKc_p38 Catalytic dom 100.0 2E-43 4.4E-48 354.4 24.5 290 129-424 14-309 (343)
159 cd05607 STKc_GRK7 Catalytic do 100.0 1.6E-43 3.5E-48 344.4 22.9 256 138-422 1-263 (277)
160 cd07879 STKc_p38delta_MAPK13 C 100.0 5.7E-43 1.2E-47 351.0 27.2 286 129-421 14-305 (342)
161 cd08223 STKc_Nek4 Catalytic do 100.0 8.9E-43 1.9E-47 334.4 27.1 255 131-416 1-257 (257)
162 cd07829 STKc_CDK_like Catalyti 100.0 4.4E-43 9.5E-48 341.1 23.9 282 132-416 1-282 (282)
163 KOG0596 Dual specificity; seri 100.0 5E-44 1.1E-48 353.0 17.0 266 123-420 354-634 (677)
164 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.2E-43 7E-48 352.1 23.2 255 128-412 5-329 (338)
165 cd08227 PK_STRAD_alpha Pseudok 100.0 6.8E-43 1.5E-47 348.2 25.1 281 134-418 2-312 (327)
166 cd05580 STKc_PKA Catalytic dom 100.0 9.5E-43 2E-47 341.1 25.1 257 130-422 1-263 (290)
167 cd06615 PKc_MEK Catalytic doma 100.0 8.2E-43 1.8E-47 344.7 24.9 279 130-419 1-293 (308)
168 PHA03210 serine/threonine kina 100.0 6.8E-43 1.5E-47 366.9 25.5 286 129-420 147-461 (501)
169 cd08529 STKc_FA2-like Catalyti 100.0 1.6E-42 3.5E-47 332.3 25.7 254 131-416 1-256 (256)
170 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.2E-42 2.6E-47 348.7 25.8 286 130-419 5-306 (342)
171 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.8E-42 3.8E-47 347.9 27.0 287 129-421 16-308 (345)
172 cd06619 PKc_MKK5 Catalytic dom 100.0 1.7E-42 3.6E-47 337.5 25.8 256 130-419 1-259 (279)
173 cd05609 STKc_MAST Catalytic do 100.0 2.1E-42 4.5E-47 341.2 26.2 270 130-428 1-288 (305)
174 KOG0579 Ste20-like serine/thre 100.0 1.8E-44 4E-49 359.3 11.3 260 129-419 31-295 (1187)
175 cd07857 STKc_MPK1 Catalytic do 100.0 3.8E-42 8.1E-47 343.6 27.3 288 131-419 1-298 (332)
176 cd06651 STKc_MEKK3 Catalytic d 100.0 2.5E-42 5.3E-47 333.7 24.9 258 131-417 3-265 (266)
177 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 4.9E-42 1.1E-46 342.3 27.5 285 129-420 9-295 (328)
178 cd06644 STKc_STK10_LOK Catalyt 100.0 3.5E-42 7.5E-47 337.3 26.0 260 129-419 11-275 (292)
179 KOG0197 Tyrosine kinases [Sign 100.0 2.2E-43 4.8E-48 350.3 17.5 250 127-411 203-455 (468)
180 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.2E-42 4.7E-47 337.5 23.9 260 130-420 1-269 (286)
181 cd06609 STKc_MST3_like Catalyt 100.0 2.5E-42 5.4E-47 335.0 24.1 256 130-418 1-256 (274)
182 KOG0983 Mitogen-activated prot 100.0 2.3E-43 5E-48 321.3 15.6 261 127-418 89-354 (391)
183 KOG0668 Casein kinase II, alph 100.0 8.2E-44 1.8E-48 316.7 11.7 280 129-418 37-327 (338)
184 cd06611 STKc_SLK_like Catalyti 100.0 1.6E-42 3.5E-47 337.4 22.0 259 129-418 4-267 (280)
185 cd06628 STKc_MAPKKK_Byr2_like 100.0 4.7E-42 1E-46 331.5 25.0 255 131-416 1-267 (267)
186 cd06643 STKc_SLK Catalytic dom 100.0 4E-42 8.8E-47 335.0 24.7 257 131-418 6-267 (282)
187 cd06655 STKc_PAK2 Catalytic do 100.0 6E-42 1.3E-46 336.6 26.0 256 130-418 19-274 (296)
188 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4E-42 8.7E-47 331.4 24.2 261 130-416 1-267 (267)
189 cd08217 STKc_Nek2 Catalytic do 100.0 7E-42 1.5E-46 328.9 25.7 256 131-416 1-265 (265)
190 cd06617 PKc_MKK3_6 Catalytic d 100.0 4.8E-42 1E-46 334.3 24.5 259 130-420 1-268 (283)
191 cd06654 STKc_PAK1 Catalytic do 100.0 5.5E-42 1.2E-46 336.9 25.1 257 129-418 19-275 (296)
192 cd07838 STKc_CDK4_6_like Catal 100.0 8.1E-42 1.8E-46 333.0 26.1 280 132-416 1-287 (287)
193 KOG0577 Serine/threonine prote 100.0 6.2E-44 1.4E-48 353.6 11.1 254 131-418 27-283 (948)
194 cd07830 STKc_MAK_like Catalyti 100.0 6.7E-42 1.4E-46 333.3 25.3 280 132-416 1-283 (283)
195 cd06645 STKc_MAP4K3 Catalytic 100.0 2.7E-42 5.8E-47 333.3 22.3 258 129-415 8-267 (267)
196 cd06631 STKc_YSK4 Catalytic do 100.0 8.9E-42 1.9E-46 329.3 25.7 256 131-416 1-265 (265)
197 cd08221 STKc_Nek9 Catalytic do 100.0 1.4E-41 3E-46 326.1 26.7 254 131-416 1-256 (256)
198 cd06637 STKc_TNIK Catalytic do 100.0 4.3E-42 9.3E-47 332.6 23.4 257 129-416 5-272 (272)
199 KOG0696 Serine/threonine prote 100.0 1.2E-43 2.6E-48 338.9 12.0 263 128-423 347-616 (683)
200 cd06652 STKc_MEKK2 Catalytic d 100.0 1.2E-41 2.5E-46 328.6 26.0 259 130-417 2-265 (265)
201 cd06646 STKc_MAP4K5 Catalytic 100.0 3.6E-42 7.7E-47 332.5 22.3 258 129-415 8-267 (267)
202 KOG0586 Serine/threonine prote 100.0 4.6E-43 1E-47 351.7 16.5 258 129-419 55-312 (596)
203 KOG0574 STE20-like serine/thre 100.0 3.5E-45 7.6E-50 336.9 1.0 256 131-420 34-290 (502)
204 KOG4236 Serine/threonine prote 100.0 5.6E-44 1.2E-48 349.8 9.3 255 132-418 564-824 (888)
205 cd08218 STKc_Nek1 Catalytic do 100.0 9.6E-42 2.1E-46 327.2 24.3 254 131-416 1-256 (256)
206 cd06656 STKc_PAK3 Catalytic do 100.0 5.5E-42 1.2E-46 337.1 22.9 257 129-418 18-274 (297)
207 cd08220 STKc_Nek8 Catalytic do 100.0 1.6E-41 3.6E-46 325.2 25.5 253 131-416 1-256 (256)
208 PHA02988 hypothetical protein; 100.0 1.2E-41 2.6E-46 332.4 24.9 250 130-412 18-274 (283)
209 cd05064 PTKc_EphR_A10 Catalyti 100.0 8.7E-42 1.9E-46 330.1 23.6 252 129-412 4-260 (266)
210 cd06613 STKc_MAP4K3_like Catal 100.0 1.7E-41 3.7E-46 326.3 25.2 258 129-415 2-262 (262)
211 cd06658 STKc_PAK5 Catalytic do 100.0 7E-42 1.5E-46 335.5 22.3 260 130-422 22-281 (292)
212 cd06630 STKc_MEKK1 Catalytic d 100.0 9.8E-42 2.1E-46 329.2 22.9 260 131-417 1-268 (268)
213 cd06626 STKc_MEKK4 Catalytic d 100.0 3.3E-41 7.2E-46 324.6 26.4 259 131-416 1-264 (264)
214 cd06607 STKc_TAO Catalytic dom 100.0 2.2E-41 4.7E-46 334.3 25.6 255 130-418 15-272 (307)
215 cd05578 STKc_Yank1 Catalytic d 100.0 6.4E-42 1.4E-46 329.0 20.9 253 131-416 1-258 (258)
216 cd06629 STKc_MAPKKK_Bck1_like 100.0 2E-41 4.3E-46 328.1 24.3 261 131-416 2-272 (272)
217 cd06608 STKc_myosinIII_like Ca 100.0 1.8E-41 3.9E-46 328.0 23.7 258 129-416 5-275 (275)
218 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.9E-41 4.1E-46 330.2 23.7 257 129-416 15-282 (282)
219 cd06639 STKc_myosinIIIB Cataly 100.0 4.9E-41 1.1E-45 328.9 26.6 259 129-417 21-291 (291)
220 cd06612 STKc_MST1_2 Catalytic 100.0 1.3E-41 2.9E-46 325.9 21.9 254 129-416 2-256 (256)
221 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.4E-41 3E-46 331.7 22.0 258 128-419 3-272 (284)
222 cd05572 STKc_cGK_PKG Catalytic 100.0 3E-41 6.6E-46 325.0 24.1 252 138-421 1-260 (262)
223 cd06632 STKc_MEKK1_plant Catal 100.0 4.3E-41 9.4E-46 322.5 24.8 255 131-416 1-258 (258)
224 KOG0664 Nemo-like MAPK-related 100.0 7.7E-44 1.7E-48 324.3 5.3 289 130-419 53-349 (449)
225 cd06605 PKc_MAPKK Catalytic do 100.0 9.8E-42 2.1E-46 328.7 20.2 254 130-418 1-262 (265)
226 cd05096 PTKc_DDR1 Catalytic do 100.0 4.8E-41 1E-45 331.3 25.1 258 129-411 4-299 (304)
227 cd05577 STKc_GRK Catalytic dom 100.0 2.5E-41 5.4E-46 328.7 22.7 256 138-423 1-264 (277)
228 cd06638 STKc_myosinIIIA Cataly 100.0 5.9E-41 1.3E-45 327.3 25.3 258 129-416 17-286 (286)
229 KOG1989 ARK protein kinase fam 100.0 4.7E-42 1E-46 358.0 18.6 254 129-415 36-309 (738)
230 cd05633 STKc_GRK3 Catalytic do 100.0 2.9E-41 6.4E-46 328.9 23.1 253 137-422 1-264 (279)
231 cd06917 STKc_NAK1_like Catalyt 100.0 3.6E-41 7.7E-46 327.3 23.0 258 131-420 2-262 (277)
232 cd06648 STKc_PAK_II Catalytic 100.0 7.8E-41 1.7E-45 326.9 25.4 257 131-420 20-276 (285)
233 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.3E-40 2.8E-45 325.5 26.9 262 130-418 1-271 (287)
234 cd06616 PKc_MKK4 Catalytic dom 100.0 2.7E-41 5.9E-46 330.1 21.9 262 129-418 3-272 (288)
235 cd06659 STKc_PAK6 Catalytic do 100.0 3.4E-41 7.3E-46 331.5 22.5 259 130-421 21-279 (297)
236 cd05106 PTKc_CSF-1R Catalytic 100.0 2.4E-41 5.3E-46 343.1 22.1 253 129-412 37-367 (374)
237 cd05048 PTKc_Ror Catalytic Dom 100.0 3.9E-41 8.6E-46 328.0 22.7 253 129-413 4-279 (283)
238 KOG0603 Ribosomal protein S6 k 100.0 4.6E-42 1E-46 346.2 16.5 249 129-421 321-571 (612)
239 cd05581 STKc_PDK1 Catalytic do 100.0 4.7E-41 1E-45 326.2 22.9 255 130-416 1-280 (280)
240 KOG0670 U4/U6-associated splic 100.0 8.3E-43 1.8E-47 341.4 10.4 291 112-418 421-751 (752)
241 cd05606 STKc_beta_ARK Catalyti 100.0 7.4E-41 1.6E-45 325.8 24.1 254 137-421 1-263 (278)
242 cd06640 STKc_MST4 Catalytic do 100.0 7.1E-41 1.5E-45 325.5 23.9 257 131-421 5-261 (277)
243 cd05611 STKc_Rim15_like Cataly 100.0 6.6E-41 1.4E-45 322.3 23.4 253 136-421 2-259 (260)
244 cd08225 STKc_Nek5 Catalytic do 100.0 6.9E-41 1.5E-45 321.1 23.4 254 131-416 1-257 (257)
245 cd06623 PKc_MAPKK_plant_like C 100.0 1.2E-40 2.7E-45 320.5 24.9 256 130-418 1-261 (264)
246 cd06624 STKc_ASK Catalytic dom 100.0 1.7E-40 3.7E-45 321.0 26.0 257 129-416 7-268 (268)
247 cd05104 PTKc_Kit Catalytic dom 100.0 4.7E-41 1E-45 341.2 23.0 254 129-413 34-370 (375)
248 cd06633 STKc_TAO3 Catalytic do 100.0 2.2E-40 4.7E-45 328.2 27.1 256 130-419 21-279 (313)
249 cd05579 STKc_MAST_like Catalyt 100.0 4.7E-41 1E-45 323.1 21.8 253 138-420 1-264 (265)
250 cd05610 STKc_MASTL Catalytic d 100.0 1.2E-40 2.7E-45 360.5 27.3 149 129-279 3-152 (669)
251 cd05052 PTKc_Abl Catalytic dom 100.0 1.2E-40 2.5E-45 321.4 24.2 250 129-412 5-257 (263)
252 KOG0193 Serine/threonine prote 100.0 1.9E-41 4.1E-46 338.4 18.7 254 129-412 391-648 (678)
253 cd08226 PK_STRAD_beta Pseudoki 100.0 5.2E-41 1.1E-45 334.8 22.0 278 136-418 4-313 (328)
254 PHA03390 pk1 serine/threonine- 100.0 1.1E-40 2.4E-45 322.8 23.6 249 129-418 13-267 (267)
255 cd08215 STKc_Nek Catalytic dom 100.0 1.5E-40 3.2E-45 318.1 24.3 254 131-416 1-258 (258)
256 cd06635 STKc_TAO1 Catalytic do 100.0 2.2E-40 4.8E-45 328.7 26.2 255 130-418 25-282 (317)
257 cd08219 STKc_Nek3 Catalytic do 100.0 1.9E-40 4.2E-45 318.2 24.3 250 131-413 1-252 (255)
258 cd06642 STKc_STK25-YSK1 Cataly 100.0 4E-41 8.7E-46 327.2 19.8 255 130-418 4-258 (277)
259 cd06647 STKc_PAK_I Catalytic d 100.0 1.2E-40 2.7E-45 326.8 23.4 258 129-419 18-275 (293)
260 cd05049 PTKc_Trk Catalytic dom 100.0 1E-40 2.2E-45 324.4 22.5 252 129-412 4-276 (280)
261 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.4E-40 5.1E-45 317.8 24.7 249 129-412 3-253 (256)
262 cd06653 STKc_MEKK3_like_1 Cata 100.0 3.7E-40 8E-45 318.1 26.0 258 130-416 2-264 (264)
263 KOG0665 Jun-N-terminal kinase 100.0 2.8E-42 6.2E-47 320.9 10.5 284 129-419 16-316 (369)
264 KOG1187 Serine/threonine prote 100.0 1E-40 2.2E-45 333.5 22.4 262 129-412 74-347 (361)
265 cd06627 STKc_Cdc7_like Catalyt 100.0 4.5E-40 9.7E-45 314.5 25.8 254 131-416 1-254 (254)
266 cd06641 STKc_MST3 Catalytic do 100.0 3.1E-40 6.7E-45 321.0 25.0 255 130-418 4-258 (277)
267 cd08228 STKc_Nek6 Catalytic do 100.0 3.6E-40 7.7E-45 318.3 25.2 254 130-413 2-261 (267)
268 cd05061 PTKc_InsR Catalytic do 100.0 4.1E-40 9E-45 322.1 25.3 260 129-420 5-287 (288)
269 cd05072 PTKc_Lyn Catalytic dom 100.0 2.9E-40 6.2E-45 318.1 23.8 250 128-412 4-256 (261)
270 KOG4279 Serine/threonine prote 100.0 1.3E-41 2.8E-46 342.1 14.6 253 136-419 581-838 (1226)
271 cd05054 PTKc_VEGFR Catalytic d 100.0 1.3E-40 2.8E-45 333.1 21.8 255 129-413 6-329 (337)
272 KOG4721 Serine/threonine prote 100.0 3E-42 6.5E-47 340.4 9.4 241 129-413 123-364 (904)
273 cd08216 PK_STRAD Pseudokinase 100.0 2.5E-40 5.5E-45 327.4 23.2 273 142-419 12-301 (314)
274 cd06606 STKc_MAPKKK Catalytic 100.0 9.1E-40 2E-44 312.5 26.2 259 131-416 1-260 (260)
275 cd05068 PTKc_Frk_like Catalyti 100.0 7.5E-40 1.6E-44 315.3 25.5 249 129-412 5-256 (261)
276 cd05613 STKc_MSK1_N N-terminal 100.0 3.2E-40 7E-45 323.0 23.2 264 131-421 1-276 (290)
277 cd06657 STKc_PAK4 Catalytic do 100.0 3.7E-40 8.1E-45 323.3 23.5 258 131-421 21-278 (292)
278 cd06634 STKc_TAO2 Catalytic do 100.0 3.5E-40 7.5E-45 326.0 23.4 256 129-418 14-272 (308)
279 cd05108 PTKc_EGFR Catalytic do 100.0 3.2E-40 6.9E-45 327.4 23.1 253 128-413 5-264 (316)
280 cd05033 PTKc_EphR Catalytic do 100.0 6.8E-40 1.5E-44 316.5 24.8 253 129-413 3-261 (266)
281 cd05090 PTKc_Ror1 Catalytic do 100.0 5.1E-40 1.1E-44 320.4 24.1 254 128-413 3-279 (283)
282 cd05062 PTKc_IGF-1R Catalytic 100.0 4.8E-40 1E-44 319.6 23.7 253 129-413 5-274 (277)
283 cd05113 PTKc_Btk_Bmx Catalytic 100.0 4.8E-40 1E-44 316.1 23.4 250 129-413 3-254 (256)
284 cd05084 PTKc_Fes Catalytic dom 100.0 6.9E-40 1.5E-44 313.7 24.1 245 136-412 1-248 (252)
285 cd05122 PKc_STE Catalytic doma 100.0 1.1E-39 2.4E-44 310.6 25.4 252 131-415 1-253 (253)
286 cd08530 STKc_CNK2-like Catalyt 100.0 6.5E-40 1.4E-44 314.0 23.8 252 131-416 1-256 (256)
287 cd06618 PKc_MKK7 Catalytic dom 100.0 6.4E-40 1.4E-44 322.0 24.2 262 126-418 11-278 (296)
288 cd05075 PTKc_Axl Catalytic dom 100.0 7.4E-40 1.6E-44 317.0 24.3 253 132-413 1-267 (272)
289 cd05093 PTKc_TrkB Catalytic do 100.0 6.4E-40 1.4E-44 320.7 24.0 251 129-412 4-274 (288)
290 cd05035 PTKc_Axl_like Catalyti 100.0 7.2E-40 1.6E-44 316.9 24.0 253 132-413 1-268 (273)
291 cd05036 PTKc_ALK_LTK Catalytic 100.0 6.1E-40 1.3E-44 319.0 23.6 253 129-413 5-274 (277)
292 cd05059 PTKc_Tec_like Catalyti 100.0 5.3E-40 1.2E-44 315.5 22.8 249 130-413 4-254 (256)
293 KOG0608 Warts/lats-like serine 100.0 3.1E-41 6.7E-46 336.6 13.9 263 129-421 628-936 (1034)
294 KOG0584 Serine/threonine prote 100.0 2.4E-41 5.1E-46 339.8 13.0 255 132-419 42-302 (632)
295 cd06614 STKc_PAK Catalytic dom 100.0 7.2E-40 1.6E-44 319.8 22.8 257 129-418 18-275 (286)
296 KOG1035 eIF-2alpha kinase GCN2 100.0 5.5E-41 1.2E-45 356.9 15.8 260 129-417 478-875 (1351)
297 PRK13184 pknD serine/threonine 100.0 7E-40 1.5E-44 353.9 24.6 255 130-413 2-285 (932)
298 KOG2345 Serine/threonine prote 100.0 1.6E-40 3.5E-45 299.2 16.2 261 126-413 17-296 (302)
299 cd05071 PTKc_Src Catalytic dom 100.0 1.3E-39 2.9E-44 314.1 23.9 248 129-412 5-255 (262)
300 cd05116 PTKc_Syk Catalytic dom 100.0 1.1E-39 2.3E-44 313.6 23.1 244 137-412 2-250 (257)
301 cd05091 PTKc_Ror2 Catalytic do 100.0 4.6E-40 9.9E-45 320.6 20.8 253 129-413 4-279 (283)
302 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.1E-39 2.4E-44 333.0 24.4 256 126-412 33-392 (400)
303 KOG0614 cGMP-dependent protein 100.0 1E-41 2.2E-46 333.0 8.9 267 123-421 413-685 (732)
304 cd05032 PTKc_InsR_like Catalyt 100.0 1.9E-39 4.1E-44 315.0 24.5 254 127-412 3-273 (277)
305 cd05053 PTKc_FGFR Catalytic do 100.0 1.2E-39 2.6E-44 319.2 23.3 255 127-413 9-287 (293)
306 cd05148 PTKc_Srm_Brk Catalytic 100.0 7.7E-40 1.7E-44 314.9 21.5 249 129-412 5-256 (261)
307 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.6E-39 3.4E-44 312.9 23.5 247 129-411 5-254 (260)
308 cd05034 PTKc_Src_like Catalyti 100.0 2.1E-39 4.5E-44 311.9 24.3 250 128-412 4-256 (261)
309 cd05088 PTKc_Tie2 Catalytic do 100.0 7.4E-40 1.6E-44 322.8 21.7 253 127-413 4-276 (303)
310 cd05109 PTKc_HER2 Catalytic do 100.0 2.1E-39 4.5E-44 315.5 24.5 252 128-412 5-263 (279)
311 cd05051 PTKc_DDR Catalytic dom 100.0 1.4E-39 3.1E-44 319.1 23.5 259 129-412 4-292 (296)
312 cd08229 STKc_Nek7 Catalytic do 100.0 1.5E-39 3.3E-44 313.9 23.1 252 130-412 2-260 (267)
313 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4.7E-39 1E-43 310.2 26.2 252 130-412 2-260 (267)
314 cd05089 PTKc_Tie1 Catalytic do 100.0 1.9E-39 4.2E-44 318.8 23.9 250 130-413 2-271 (297)
315 cd05055 PTKc_PDGFR Catalytic d 100.0 2.8E-39 6E-44 318.7 24.9 255 127-412 32-296 (302)
316 KOG0695 Serine/threonine prote 100.0 6.5E-40 1.4E-44 306.1 19.1 264 126-422 246-525 (593)
317 KOG4645 MAPKKK (MAP kinase kin 100.0 6.5E-42 1.4E-46 365.5 5.9 263 131-422 1236-1503(1509)
318 cd05094 PTKc_TrkC Catalytic do 100.0 2.8E-39 6.2E-44 316.6 23.9 251 129-412 4-277 (291)
319 cd00192 PTKc Catalytic domain 100.0 3.1E-39 6.7E-44 309.7 23.7 246 136-413 1-260 (262)
320 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.7E-39 5.8E-44 311.2 23.3 248 129-412 5-255 (260)
321 cd05046 PTK_CCK4 Pseudokinase 100.0 3E-39 6.5E-44 313.4 23.8 254 129-413 4-272 (275)
322 cd05063 PTKc_EphR_A2 Catalytic 100.0 4.4E-39 9.5E-44 311.1 24.5 252 129-412 4-262 (268)
323 cd05123 STKc_AGC Catalytic dom 100.0 3.3E-39 7.1E-44 308.2 23.2 246 138-416 1-250 (250)
324 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.9E-39 8.5E-44 314.1 24.2 264 132-412 6-276 (283)
325 cd05583 STKc_MSK_N N-terminal 100.0 2.8E-39 6E-44 316.0 22.7 264 131-421 1-274 (288)
326 cd05066 PTKc_EphR_A Catalytic 100.0 4.5E-39 9.7E-44 311.1 23.6 252 129-412 3-261 (267)
327 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.8E-39 6.1E-44 324.4 22.8 255 129-413 6-335 (343)
328 cd05069 PTKc_Yes Catalytic dom 100.0 6.3E-39 1.4E-43 308.8 24.3 248 129-412 5-255 (260)
329 cd05097 PTKc_DDR_like Catalyti 100.0 3.8E-39 8.3E-44 316.3 23.1 259 129-412 4-291 (295)
330 cd05092 PTKc_TrkA Catalytic do 100.0 4.2E-39 9E-44 313.7 23.0 251 129-412 4-276 (280)
331 cd05039 PTKc_Csk_like Catalyti 100.0 8.4E-39 1.8E-43 306.9 24.7 244 129-412 5-251 (256)
332 cd05098 PTKc_FGFR1 Catalytic d 100.0 5.2E-39 1.1E-43 317.3 23.6 253 129-413 17-295 (307)
333 cd05060 PTKc_Syk_like Catalyti 100.0 6.1E-39 1.3E-43 308.2 23.5 244 136-412 1-250 (257)
334 cd05111 PTK_HER3 Pseudokinase 100.0 6.7E-39 1.4E-43 312.2 23.9 251 129-412 6-263 (279)
335 cd05112 PTKc_Itk Catalytic dom 100.0 9.5E-39 2.1E-43 306.4 24.5 250 129-413 3-254 (256)
336 cd05082 PTKc_Csk Catalytic dom 100.0 5.8E-39 1.3E-43 308.2 23.0 245 128-412 4-251 (256)
337 cd05045 PTKc_RET Catalytic dom 100.0 6.3E-39 1.4E-43 313.9 23.5 250 131-412 1-281 (290)
338 cd05065 PTKc_EphR_B Catalytic 100.0 8.2E-39 1.8E-43 309.4 23.8 252 129-412 3-263 (269)
339 cd05056 PTKc_FAK Catalytic dom 100.0 1E-38 2.2E-43 308.9 24.4 252 129-413 5-261 (270)
340 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.4E-38 3E-43 310.3 25.3 269 129-412 3-278 (284)
341 PF07714 Pkinase_Tyr: Protein 100.0 2.4E-39 5.2E-44 312.0 19.6 248 133-412 2-257 (259)
342 cd05101 PTKc_FGFR2 Catalytic d 100.0 8.9E-39 1.9E-43 315.1 23.7 255 127-413 12-292 (304)
343 cd08222 STKc_Nek11 Catalytic d 100.0 6.4E-39 1.4E-43 308.5 22.1 253 131-416 1-260 (260)
344 smart00219 TyrKc Tyrosine kina 100.0 1.1E-38 2.3E-43 305.7 23.5 249 132-412 1-256 (258)
345 cd05085 PTKc_Fer Catalytic dom 100.0 1.7E-38 3.7E-43 303.5 24.7 244 136-412 1-246 (250)
346 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 7.3E-39 1.6E-43 312.5 22.5 269 130-413 4-279 (284)
347 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.4E-38 3E-43 315.3 24.8 252 129-412 11-288 (314)
348 PLN03225 Serine/threonine-prot 100.0 6.3E-39 1.4E-43 339.3 23.3 280 127-421 129-458 (566)
349 cd05050 PTKc_Musk Catalytic do 100.0 9.2E-39 2E-43 312.4 22.7 252 129-412 4-284 (288)
350 KOG0194 Protein tyrosine kinas 100.0 1.5E-39 3.2E-44 327.7 17.5 255 127-412 154-415 (474)
351 cd05041 PTKc_Fes_like Catalyti 100.0 1.4E-38 3.1E-43 304.3 23.5 244 136-412 1-247 (251)
352 KOG1026 Nerve growth factor re 100.0 6.5E-40 1.4E-44 340.5 15.1 253 127-411 483-756 (774)
353 cd05043 PTK_Ryk Pseudokinase d 100.0 1.4E-38 3.1E-43 309.6 23.5 254 128-412 4-271 (280)
354 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.5E-38 3.2E-43 317.9 23.8 254 128-413 10-289 (334)
355 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.6E-38 3.4E-43 324.4 24.1 254 129-413 36-395 (401)
356 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.7E-38 3.6E-43 306.6 22.7 239 136-413 1-260 (262)
357 cd05115 PTKc_Zap-70 Catalytic 100.0 2.4E-38 5.3E-43 304.5 23.8 243 137-412 2-250 (257)
358 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.6E-38 3.5E-43 308.7 22.6 238 137-413 2-272 (274)
359 cd05040 PTKc_Ack_like Catalyti 100.0 2.6E-38 5.6E-43 303.6 23.4 245 136-412 1-253 (257)
360 cd05073 PTKc_Hck Catalytic dom 100.0 3.6E-38 7.9E-43 303.5 24.2 248 129-412 5-255 (260)
361 cd05095 PTKc_DDR2 Catalytic do 100.0 3.1E-38 6.7E-43 310.1 23.5 259 129-412 4-292 (296)
362 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 9.4E-39 2E-43 307.4 18.9 239 136-413 1-256 (258)
363 cd08528 STKc_Nek10 Catalytic d 100.0 5.7E-38 1.2E-42 303.4 24.1 251 131-413 1-266 (269)
364 cd05057 PTKc_EGFR_like Catalyt 100.0 6.3E-38 1.4E-42 305.0 24.5 250 129-411 6-262 (279)
365 cd05047 PTKc_Tie Catalytic dom 100.0 4E-38 8.7E-43 305.0 22.7 243 136-412 1-263 (270)
366 cd05576 STKc_RPK118_like Catal 100.0 1.1E-38 2.4E-43 303.1 17.4 229 141-416 4-237 (237)
367 cd05042 PTKc_Aatyk Catalytic d 100.0 6.8E-38 1.5E-42 303.0 22.5 250 136-412 1-265 (269)
368 cd05058 PTKc_Met_Ron Catalytic 100.0 9.8E-38 2.1E-42 300.4 23.3 247 136-413 1-255 (262)
369 cd05110 PTKc_HER4 Catalytic do 100.0 9.1E-38 2E-42 307.9 23.2 253 128-413 5-264 (303)
370 cd05083 PTKc_Chk Catalytic dom 100.0 7.7E-38 1.7E-42 300.0 21.7 242 129-412 5-249 (254)
371 cd05044 PTKc_c-ros Catalytic d 100.0 7.8E-38 1.7E-42 302.3 21.2 245 136-412 1-265 (269)
372 KOG1095 Protein tyrosine kinas 100.0 4.8E-38 1E-42 337.6 21.3 254 127-412 689-956 (1025)
373 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.2E-37 2.5E-42 303.2 22.1 258 129-412 3-278 (284)
374 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.4E-37 3.1E-42 301.1 22.4 253 132-413 1-268 (273)
375 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.5E-37 5.4E-42 299.2 23.9 250 136-412 1-265 (269)
376 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.2E-37 2.7E-42 298.9 21.4 236 136-412 1-256 (259)
377 KOG1151 Tousled-like protein k 100.0 6.2E-39 1.3E-43 308.9 11.0 266 129-418 462-746 (775)
378 PHA02882 putative serine/threo 100.0 4.9E-37 1.1E-41 301.4 24.7 261 129-412 11-291 (294)
379 KOG4250 TANK binding protein k 100.0 1.3E-38 2.8E-43 323.8 12.5 203 131-336 14-227 (732)
380 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.1E-36 2.3E-41 294.8 24.1 250 136-412 1-264 (268)
381 KOG1006 Mitogen-activated prot 100.0 3.5E-39 7.6E-44 293.0 4.6 262 129-418 63-332 (361)
382 KOG0587 Traf2- and Nck-interac 100.0 2.4E-37 5.1E-42 320.1 18.4 263 126-418 15-287 (953)
383 KOG1094 Discoidin domain recep 100.0 2.3E-36 5.1E-41 299.9 20.1 258 129-412 537-799 (807)
384 KOG4257 Focal adhesion tyrosin 100.0 6.1E-37 1.3E-41 305.7 14.3 250 129-411 388-643 (974)
385 PLN03224 probable serine/threo 100.0 8.4E-36 1.8E-40 308.5 23.3 276 127-418 142-505 (507)
386 smart00220 S_TKc Serine/Threon 100.0 1.7E-35 3.6E-40 279.7 22.8 244 142-416 1-244 (244)
387 KOG0196 Tyrosine kinase, EPH ( 100.0 6.8E-37 1.5E-41 312.5 11.9 255 127-413 626-887 (996)
388 KOG1167 Serine/threonine prote 100.0 1.2E-36 2.7E-41 293.2 11.0 281 129-418 35-386 (418)
389 KOG0199 ACK and related non-re 100.0 9.9E-36 2.2E-40 300.4 13.9 254 129-415 109-370 (1039)
390 KOG4278 Protein tyrosine kinas 100.0 3.7E-35 8.1E-40 292.5 16.4 246 131-410 268-516 (1157)
391 KOG1027 Serine/threonine prote 100.0 1.1E-35 2.4E-40 306.4 10.5 249 131-417 510-771 (903)
392 KOG0984 Mitogen-activated prot 100.0 3.6E-34 7.8E-39 251.7 11.3 216 127-347 43-267 (282)
393 PLN00113 leucine-rich repeat r 100.0 1.2E-33 2.5E-38 320.4 18.4 250 130-413 690-947 (968)
394 KOG0576 Mitogen-activated prot 100.0 1.2E-34 2.5E-39 291.9 6.6 260 129-417 14-275 (829)
395 KOG1152 Signal transduction se 100.0 1.1E-33 2.4E-38 280.8 10.7 203 128-335 559-771 (772)
396 KOG3653 Transforming growth fa 100.0 9.4E-33 2E-37 269.1 11.4 265 128-409 208-495 (534)
397 KOG0200 Fibroblast/platelet-de 100.0 1.5E-31 3.2E-36 285.8 21.6 251 129-411 295-573 (609)
398 KOG1025 Epidermal growth facto 100.0 2.8E-32 6.1E-37 279.8 13.6 249 130-411 696-951 (1177)
399 cd00180 PKc Catalytic domain o 100.0 5.6E-30 1.2E-34 235.8 21.6 213 138-414 1-215 (215)
400 KOG2052 Activin A type IB rece 100.0 8E-31 1.7E-35 253.9 16.2 249 129-410 210-496 (513)
401 smart00221 STYKc Protein kinas 100.0 1.3E-29 2.9E-34 237.1 20.6 211 132-345 1-214 (225)
402 PLN00181 protein SPA1-RELATED; 100.0 2.5E-31 5.4E-36 294.3 10.2 203 185-418 28-270 (793)
403 KOG1345 Serine/threonine kinas 100.0 5.4E-31 1.2E-35 240.4 7.9 258 129-416 23-290 (378)
404 KOG1024 Receptor-like protein 100.0 6.1E-29 1.3E-33 237.0 16.2 253 129-412 283-550 (563)
405 KOG0590 Checkpoint kinase and 100.0 1.6E-29 3.4E-34 267.3 7.3 265 133-421 321-593 (601)
406 smart00750 KIND kinase non-cat 99.9 7.4E-28 1.6E-32 217.8 12.1 164 217-417 3-169 (176)
407 COG0515 SPS1 Serine/threonine 99.9 5.9E-25 1.3E-29 215.3 25.4 262 132-418 2-280 (384)
408 KOG0603 Ribosomal protein S6 k 99.9 7.3E-28 1.6E-32 243.6 3.9 242 138-422 2-252 (612)
409 PRK09188 serine/threonine prot 99.9 8E-26 1.7E-30 225.0 16.7 164 129-305 17-193 (365)
410 KOG0606 Microtubule-associated 99.9 1.3E-25 2.8E-30 237.7 11.1 226 129-422 82-324 (1205)
411 KOG1164 Casein kinase (serine/ 99.9 4.4E-24 9.5E-29 212.2 21.3 255 131-413 19-293 (322)
412 KOG1165 Casein kinase (serine/ 99.9 2.4E-24 5.2E-29 202.1 16.9 209 131-346 29-252 (449)
413 KOG1163 Casein kinase (serine/ 99.9 2.7E-24 5.8E-29 193.7 12.4 247 129-406 14-273 (341)
414 KOG1240 Protein kinase contain 99.9 1.1E-24 2.5E-29 230.6 9.0 248 131-413 24-291 (1431)
415 cd05147 RIO1_euk RIO kinase fa 99.9 1.4E-23 3.1E-28 192.0 11.8 142 135-282 2-168 (190)
416 PF14531 Kinase-like: Kinase-l 99.9 8.8E-24 1.9E-28 202.0 9.4 237 131-404 13-288 (288)
417 PRK10359 lipopolysaccharide co 99.9 3.8E-23 8.2E-28 192.0 10.8 174 129-327 30-216 (232)
418 cd05145 RIO1_like RIO kinase f 99.9 2.1E-22 4.5E-27 184.7 14.1 143 134-282 1-168 (190)
419 PRK12274 serine/threonine prot 99.9 2.9E-22 6.2E-27 182.4 13.9 192 132-338 4-212 (218)
420 KOG4158 BRPK/PTEN-induced prot 99.9 8.3E-22 1.8E-26 189.0 10.7 208 187-423 274-529 (598)
421 KOG0195 Integrin-linked kinase 99.8 8.9E-22 1.9E-26 180.2 6.7 255 118-411 178-440 (448)
422 KOG1033 eIF-2alpha kinase PEK/ 99.8 2.8E-22 6.2E-27 199.6 2.6 154 228-416 356-515 (516)
423 smart00090 RIO RIO-like kinase 99.8 3.1E-20 6.7E-25 175.8 13.3 146 131-281 29-198 (237)
424 PRK10345 hypothetical protein; 99.8 5.7E-20 1.2E-24 170.0 13.5 139 132-278 4-156 (210)
425 KOG1166 Mitotic checkpoint ser 99.8 4E-20 8.6E-25 199.9 12.5 195 127-330 695-900 (974)
426 KOG0590 Checkpoint kinase and 99.8 8.5E-21 1.8E-25 201.0 -0.5 263 130-418 20-291 (601)
427 PRK14879 serine/threonine prot 99.8 1.7E-18 3.6E-23 161.4 14.0 139 135-282 1-145 (211)
428 cd05144 RIO2_C RIO kinase fami 99.8 2.1E-18 4.6E-23 159.2 12.3 139 131-282 16-176 (198)
429 TIGR03724 arch_bud32 Kae1-asso 99.7 9.1E-18 2E-22 155.0 12.1 133 137-281 1-139 (199)
430 KOG1023 Natriuretic peptide re 99.7 8.9E-18 1.9E-22 170.6 10.3 205 183-411 1-218 (484)
431 cd05119 RIO RIO kinase family, 99.7 2.7E-17 5.7E-22 150.3 11.7 137 135-281 2-164 (187)
432 PRK09605 bifunctional UGMP fam 99.7 3.4E-17 7.3E-22 173.7 13.8 139 130-281 333-477 (535)
433 PRK01723 3-deoxy-D-manno-octul 99.7 4.2E-16 9.1E-21 147.9 13.7 138 136-280 37-191 (239)
434 cd05120 APH_ChoK_like Aminogly 99.7 9.8E-16 2.1E-20 133.7 12.7 132 134-280 2-138 (155)
435 KOG0601 Cyclin-dependent kinas 99.7 4.1E-16 8.9E-21 158.6 11.2 256 129-418 113-384 (524)
436 KOG0606 Microtubule-associated 99.6 7.4E-17 1.6E-21 171.8 4.0 269 129-426 803-1105(1205)
437 cd05146 RIO3_euk RIO kinase fa 99.5 1.6E-13 3.5E-18 124.9 12.9 141 135-282 2-175 (197)
438 KOG1243 Protein kinase [Genera 99.5 1E-12 2.2E-17 135.3 15.9 171 146-329 27-199 (690)
439 KOG0601 Cyclin-dependent kinas 99.5 3.8E-14 8.1E-19 144.4 4.9 258 122-417 257-518 (524)
440 TIGR01982 UbiB 2-polyprenylphe 99.4 9.1E-13 2E-17 135.7 12.3 143 135-282 122-308 (437)
441 cd05151 ChoK Choline Kinase (C 99.4 8.9E-13 1.9E-17 118.2 10.6 127 135-279 3-135 (170)
442 PRK04750 ubiB putative ubiquin 99.4 1.9E-13 4.2E-18 142.5 6.8 145 130-283 120-316 (537)
443 KOG1266 Protein kinase [Signal 99.4 8.2E-13 1.8E-17 124.9 6.9 240 145-417 81-335 (458)
444 KOG3741 Poly(A) ribonuclease s 99.2 4.8E-10 1E-14 112.5 18.1 212 144-413 290-521 (655)
445 cd05154 ACAD10_11_like Acyl-Co 99.2 1.3E-10 2.8E-15 108.6 12.8 144 135-281 3-207 (223)
446 KOG3087 Serine/threonine prote 99.2 2.2E-10 4.7E-15 100.8 11.9 144 134-281 11-166 (229)
447 KOG2137 Protein kinase [Signal 99.2 7.3E-12 1.6E-16 129.5 3.2 156 239-420 107-272 (700)
448 COG3642 Mn2+-dependent serine/ 99.2 2.2E-10 4.9E-15 101.2 11.3 133 136-282 2-142 (204)
449 PF01163 RIO1: RIO1 family; I 99.1 4.1E-10 8.9E-15 102.2 11.8 128 145-282 1-157 (188)
450 COG0478 RIO-like serine/threon 99.0 3.6E-09 7.7E-14 99.0 12.1 138 132-281 93-252 (304)
451 PRK15123 lipopolysaccharide co 99.0 9.8E-09 2.1E-13 98.7 14.9 132 146-279 38-193 (268)
452 COG4248 Uncharacterized protei 98.9 4E-08 8.7E-13 96.6 15.9 259 132-409 13-292 (637)
453 COG1718 RIO1 Serine/threonine 98.9 7.1E-08 1.5E-12 89.5 14.5 139 136-282 54-217 (268)
454 PF06293 Kdo: Lipopolysacchari 98.8 2.9E-08 6.3E-13 92.1 11.6 108 174-281 56-171 (206)
455 KOG0576 Mitogen-activated prot 98.7 7.6E-09 1.6E-13 106.4 1.9 246 130-421 242-492 (829)
456 PRK09902 hypothetical protein; 98.6 5.7E-07 1.2E-11 82.4 13.2 139 139-280 27-179 (216)
457 PF06176 WaaY: Lipopolysacchar 98.6 7.5E-07 1.6E-11 81.9 13.3 140 129-279 30-182 (229)
458 PF01636 APH: Phosphotransfera 98.5 1.8E-06 4E-11 81.0 14.2 139 135-279 2-196 (239)
459 TIGR02172 Fb_sc_TIGR02172 Fibr 98.5 1.5E-06 3.3E-11 81.7 12.4 133 136-280 7-182 (226)
460 COG0661 AarF Predicted unusual 98.3 3.2E-06 6.9E-11 88.2 11.0 144 136-283 131-317 (517)
461 KOG1035 eIF-2alpha kinase GCN2 98.3 1.8E-06 3.9E-11 94.8 9.4 202 176-419 229-440 (1351)
462 PLN02876 acyl-CoA dehydrogenas 98.3 1.2E-05 2.7E-10 89.8 14.7 148 134-282 42-259 (822)
463 cd05150 APH Aminoglycoside 3'- 98.2 9.9E-06 2.1E-10 77.1 11.6 74 137-219 5-80 (244)
464 PF13095 FTA2: Kinetochore Sim 98.2 5.2E-05 1.1E-09 69.1 14.2 130 129-278 36-206 (207)
465 COG2112 Predicted Ser/Thr prot 98.2 8.1E-06 1.8E-10 72.0 8.0 130 131-279 23-154 (201)
466 cd05155 APH_ChoK_like_1 Unchar 98.1 2.7E-05 5.8E-10 73.8 10.7 29 251-279 165-193 (235)
467 KOG2268 Serine/threonine prote 97.9 1.4E-05 3E-10 77.0 5.8 139 131-282 93-253 (465)
468 cd05157 ETNK_euk Ethanolamine 97.9 0.00015 3.2E-09 68.5 12.4 74 135-217 3-78 (235)
469 PF10707 YrbL-PhoP_reg: PhoP r 97.9 0.00023 5E-09 65.3 12.8 130 135-274 6-165 (199)
470 PF12260 PIP49_C: Protein-kina 97.8 8.7E-05 1.9E-09 67.6 8.9 98 178-281 8-112 (188)
471 KOG2270 Serine/threonine prote 97.8 0.00033 7.3E-09 68.8 12.4 143 133-281 147-314 (520)
472 KOG1235 Predicted unusual prot 97.7 0.00026 5.6E-09 73.9 11.2 142 136-283 167-357 (538)
473 PRK09550 mtnK methylthioribose 97.7 0.00064 1.4E-08 69.1 13.8 77 135-215 31-115 (401)
474 PRK10593 hypothetical protein; 97.7 0.00065 1.4E-08 66.7 13.3 80 131-216 15-98 (297)
475 PRK05231 homoserine kinase; Pr 97.7 0.00088 1.9E-08 66.4 14.0 30 250-279 187-216 (319)
476 TIGR02721 ycfN_thiK thiamine k 97.7 0.0002 4.4E-09 68.6 9.1 133 138-281 4-176 (256)
477 TIGR00938 thrB_alt homoserine 97.6 0.00071 1.5E-08 66.8 12.8 143 131-279 23-216 (307)
478 KOG1826 Ras GTPase activating 97.6 1E-05 2.2E-10 90.9 -0.9 164 169-334 1269-1441(2724)
479 cd05153 HomoserineK_II Homoser 97.6 0.00053 1.2E-08 67.1 11.2 140 133-279 17-204 (296)
480 cd05156 ChoK_euk Choline Kinas 97.6 0.00051 1.1E-08 67.5 10.9 74 135-217 3-83 (302)
481 COG3173 Predicted aminoglycosi 97.5 0.0015 3.3E-08 64.1 13.1 150 131-283 26-231 (321)
482 cd05152 MPH2' Macrolide 2'-Pho 97.3 0.0037 8E-08 60.7 12.9 31 251-281 186-217 (276)
483 KOG1093 Predicted protein kina 97.3 0.00049 1.1E-08 70.3 6.5 172 175-419 28-200 (725)
484 PLN02421 phosphotransferase, a 97.3 0.003 6.5E-08 63.0 12.1 147 123-279 8-212 (330)
485 PLN02236 choline kinase 97.1 0.0055 1.2E-07 61.5 12.4 140 131-280 38-231 (344)
486 TIGR01767 MTRK 5-methylthiorib 96.8 0.0068 1.5E-07 60.4 9.2 74 137-215 2-84 (370)
487 PLN02756 S-methyl-5-thioribose 96.8 0.027 5.8E-07 57.3 13.5 76 134-215 36-119 (418)
488 PF01633 Choline_kinase: Choli 96.6 0.0079 1.7E-07 55.8 8.2 29 251-279 144-173 (211)
489 PRK12396 5-methylribose kinase 96.5 0.012 2.5E-07 59.6 9.2 77 135-215 34-117 (409)
490 PTZ00384 choline kinase; Provi 96.5 0.022 4.8E-07 57.9 10.9 86 123-218 44-136 (383)
491 PF03881 Fructosamin_kin: Fruc 96.3 0.032 6.9E-07 54.4 10.7 76 132-216 19-97 (288)
492 PTZ00296 choline kinase; Provi 96.3 0.042 9E-07 57.0 12.0 90 117-216 93-191 (442)
493 TIGR02904 spore_ysxE spore coa 96.2 0.032 7E-07 55.0 10.1 31 251-281 197-227 (309)
494 PRK06148 hypothetical protein; 96.1 0.056 1.2E-06 62.0 12.9 31 250-280 203-236 (1013)
495 COG2334 Putative homoserine ki 95.9 0.16 3.5E-06 50.4 13.4 137 136-279 32-227 (331)
496 COG5072 ALK1 Serine/threonine 95.8 0.044 9.5E-07 54.2 8.7 111 203-330 298-409 (488)
497 PRK11768 serine/threonine prot 95.2 0.62 1.3E-05 46.3 14.9 72 141-216 36-112 (325)
498 KOG2269 Serine/threonine prote 95.0 0.073 1.6E-06 51.9 7.0 136 134-279 256-431 (531)
499 COG3001 Uncharacterized protei 94.6 0.26 5.5E-06 46.0 9.1 76 131-215 17-95 (286)
500 TIGR02906 spore_CotS spore coa 94.4 0.078 1.7E-06 52.2 6.1 29 250-279 187-215 (313)
No 1
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.8e-79 Score=596.02 Aligned_cols=378 Identities=68% Similarity=1.133 Sum_probs=355.0
Q ss_pred ccccCCcccccchhhhhcCcchhhhhcccccccCcccccccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCC
Q 011763 90 SFRLGNLHKYIEGEQVAAGWPAWLSAVAGEAIQGWVPLRADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFE 169 (478)
Q Consensus 90 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~ 169 (478)
..+.+...+..++++.+++||+|+..+.++++.+|.+...+.|+.+++||+|.||.||+|++..+|+.||+|+++.+...
T Consensus 77 ~~~~~~~~~~~e~~~~~a~~p~~l~~~~ge~~~~w~~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~ 156 (560)
T KOG0600|consen 77 GSRPSSVPKSTEAEQVAAGWPAWLSSVAGEALHGWGPRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEK 156 (560)
T ss_pred ccCCCCCCCcchhhhhhccCccccccccccccccccccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCC
Confidence 33556666677889999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 011763 170 PESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHS 249 (478)
Q Consensus 170 ~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~ 249 (478)
......+.+||.||++|+||||++|.++..+...+.+|||+|||+++|..++......|++.+++.|++||+.||+|||.
T Consensus 157 ~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~ 236 (560)
T KOG0600|consen 157 EGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHS 236 (560)
T ss_pred CcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhh
Confidence 88888899999999999999999999999987778999999999999999999999999999999999999999999999
Q ss_pred CCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhC
Q 011763 250 RGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIG 329 (478)
Q Consensus 250 ~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG 329 (478)
+||+|||||.+|||||.+|.+||+|||+|+++.......+++.+.|.||+|||+|+|...|+.++|+||+||||.||+.|
T Consensus 237 ~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~g 316 (560)
T KOG0600|consen 237 RGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLG 316 (560)
T ss_pred cCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcC
Confidence 99999999999999999999999999999998888778899999999999999999999999999999999999999999
Q ss_pred CCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHH
Q 011763 330 KPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASA 409 (478)
Q Consensus 330 ~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e 409 (478)
++.|++.++.++++.|++++|.|.+++|...++|+...+++..++...+++.|..++..+++|+..||..||.+|.||.+
T Consensus 317 kPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~ 396 (560)
T KOG0600|consen 317 KPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASS 396 (560)
T ss_pred CCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCcccCCCCCCCCCCCCCCCCCChhhhhhhhHHHHhhhcCCcCCCccccccccCCC
Q 011763 410 ALASEYFSTKPYACDLSSLPIYPPSKEIDAKHREDARRKKVGGRVRGAETRKTTRKSH 467 (478)
Q Consensus 410 ~L~hp~f~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (478)
+|+|+||+..|.+|+++.||.+++.+|++.+.+.+.++...+...+.....+..+.++
T Consensus 397 aL~seyF~t~p~~~~p~~Lp~y~~s~E~~~K~r~e~~r~~~~~~~~~~~~~~~~~~~r 454 (560)
T KOG0600|consen 397 ALQSEYFTTEPLPCDPSSLPKYPPSHELDAKRRREQKRRNKGGASKRRIRERGDRGSR 454 (560)
T ss_pred HhcCcccccCCCCCCcccCCCCCcchhHHHHHHHHHhhcccccccccccccccccccC
Confidence 9999999999999999999999999999999999998887755444444434333333
No 2
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.1e-63 Score=465.67 Aligned_cols=311 Identities=42% Similarity=0.735 Sum_probs=275.6
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|+.+++|++|+||.||+|+++.+++.||+|.++.+.-....--.-.+||.+|.+++|||||.+-.+.....-+.+||
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 56899999999999999999999999999999999866422221223468999999999999999999998777788999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
|||||++++...+.....+|...+++.++.|++.||+|||.+.|+||||||+|+|++..|.+||+|||+|+.+... ..+
T Consensus 155 VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp-~k~ 233 (419)
T KOG0663|consen 155 VMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP-LKP 233 (419)
T ss_pred eHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCC-ccc
Confidence 9999999998888887789999999999999999999999999999999999999999999999999999988764 356
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC-cc-
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH-AT- 366 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~-~~- 366 (478)
++..+.|.||+|||++++...|+.++|+||+|||+.||++++|.|.|..+.+++.+|+..+|.|.+.+|....... ..
T Consensus 234 ~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~ 313 (419)
T KOG0663|consen 234 YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKK 313 (419)
T ss_pred CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhc
Confidence 7888899999999999999999999999999999999999999999999999999999999999999999865433 32
Q ss_pred ccCCCCCCCccchhcccCC--chhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCCCCCCCCCCCCCCChhhhhhh
Q 011763 367 LFKPQQPYDSSLRETFKDL--PTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYACDLSSLPIYPPSKEIDAKH 441 (478)
Q Consensus 367 ~~~~~~~~~~~l~~~~~~~--~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~~~~~~~~p~~~~~~~~~~~~ 441 (478)
...+.+++ ..++..|..+ ++...+|++.+|.+||.+|+||.|+|+|+||.+.|.++++..+|.+|...+.++..
T Consensus 314 ~~f~~~py-n~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~~P~~~Pt~P~k~~~~~~~ 389 (419)
T KOG0663|consen 314 MTFSEHPY-NNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPIDPSMFPTWPAKSEQQRVK 389 (419)
T ss_pred cccCCCCc-hhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCCChhhcCCCccccccccCC
Confidence 23333333 4567777654 59999999999999999999999999999999999999999999999887765543
No 3
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1e-61 Score=440.15 Aligned_cols=299 Identities=44% Similarity=0.760 Sum_probs=266.6
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
++|..+++||+|.||.||+|++..+|+.||||+++..+..........+||+.|+.++|+||+.|+++|.. ...+.||
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~--~~~l~lV 79 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPH--KSNLSLV 79 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccC--CCceEEE
Confidence 47999999999999999999999999999999999877655555667899999999999999999999987 6678999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL 289 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 289 (478)
+|||+.+|...+......|+..+++.|+.+++.||+|||.+.|+||||||.|+||+.+|.+||+|||+|+.+...... .
T Consensus 80 fEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~-~ 158 (318)
T KOG0659|consen 80 FEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI-Q 158 (318)
T ss_pred EEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc-c
Confidence 999999999999999999999999999999999999999999999999999999999999999999999988765433 3
Q ss_pred cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccC-CCCCcccc
Q 011763 290 TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKS-KLPHATLF 368 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~-~~~~~~~~ 368 (478)
+..+.|.||+|||.++|.+.|+..+||||+|||+.||+-+.|.|.|.++.+++..|++.+|+|.++.|+.. .+++...+
T Consensus 159 ~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~ 238 (318)
T KOG0659|consen 159 THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKI 238 (318)
T ss_pred ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHH
Confidence 34478999999999999999999999999999999999999999999999999999999999999999874 45554433
Q ss_pred CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCCCCCCCCCCCCCC
Q 011763 369 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYACDLSSLPIYPP 433 (478)
Q Consensus 369 ~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~~~~~~~~p~~~~ 433 (478)
. +.-...+...|...++++.||+..||.+||.+|+|+.|+|+|+||++.|.++.+..+|....
T Consensus 239 ~--~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt~~~~lp~p~~ 301 (318)
T KOG0659|consen 239 Q--QFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPTPPSKLPIPST 301 (318)
T ss_pred h--cCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCCChhhCcCCcc
Confidence 3 11123344478889999999999999999999999999999999999999888877766433
No 4
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=9.8e-61 Score=440.52 Aligned_cols=286 Identities=34% Similarity=0.605 Sum_probs=254.4
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
+.|+.+.++|+|+||+||+|+++.||+.||||++.-...++...+-.++||++|++|+|+|+|.|+++|.. ...++||
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr--krklhLV 79 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRR--KRKLHLV 79 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh--cceeEEE
Confidence 57999999999999999999999999999999997665556666667899999999999999999999977 6779999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL 289 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 289 (478)
+|||+...+..+......++.+.++.|++|++.|+.|||++++|||||||+||||+.+|.+||||||+|+.... .....
T Consensus 80 FE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-pgd~Y 158 (396)
T KOG0593|consen 80 FEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA-PGDNY 158 (396)
T ss_pred eeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcC-Ccchh
Confidence 99999999999888777899999999999999999999999999999999999999999999999999997764 33566
Q ss_pred cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCC--CCccc
Q 011763 290 TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL--PHATL 367 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~--~~~~~ 367 (478)
+.++.|.||+|||.+.+...|+.++|||++||++.||++|.++|.+.++.+++..|...+|...++...-... .....
T Consensus 159 TDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv 238 (396)
T KOG0593|consen 159 TDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGV 238 (396)
T ss_pred hhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeee
Confidence 7889999999999999999999999999999999999999999999999999999999999988765432111 11222
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
..|...-...++..++.++..+.||+..||+.||++|++.+|+|.||||..
T Consensus 239 ~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 239 RLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred ecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence 334444556788999999999999999999999999999999999999953
No 5
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-61 Score=466.10 Aligned_cols=287 Identities=39% Similarity=0.688 Sum_probs=261.3
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcC-CCCeeeecceeeecCCceEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLD-HPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~ 207 (478)
.++|.++++||.|.||.||+|+.+.++..||||.++.....-+..-. +||++.|++|+ |||||+|.+++.+... .+|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~n-LREvksL~kln~hpniikL~Evi~d~~~-~L~ 86 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMN-LREVKSLRKLNPHPNIIKLKEVIRDNDR-ILY 86 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHH-HHHHHHHHhcCCCCcchhhHHHhhccCc-eEe
Confidence 67999999999999999999999999999999999876655333333 47999999998 9999999999988533 899
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
+|||||+.+|.+++..++..|++..++.|+.||++||+|+|.+|++|||||||||||.....+||+|||+|+.... ..
T Consensus 87 fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S--kp 164 (538)
T KOG0661|consen 87 FVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRS--KP 164 (538)
T ss_pred eeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccccc--CC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997765 36
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhcc-CCCCCcc
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKK-SKLPHAT 366 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~-~~~~~~~ 366 (478)
+.+.++.|.||+|||+|+....|+.++|||++|||++|+.+-+++|.|.++.+++.+|.+.+|.|..+.|.. .++....
T Consensus 165 PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~m 244 (538)
T KOG0661|consen 165 PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAM 244 (538)
T ss_pred CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHh
Confidence 778899999999999999989999999999999999999999999999999999999999999999999877 4555555
Q ss_pred ccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 367 LFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 367 ~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
.+...+.....+...++..+.++.+||.+||.|||.+||||.|+|+||||+..
T Consensus 245 nf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~ 297 (538)
T KOG0661|consen 245 NFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVG 297 (538)
T ss_pred ccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccc
Confidence 66666666777888888899999999999999999999999999999999853
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.6e-59 Score=444.13 Aligned_cols=265 Identities=31% Similarity=0.447 Sum_probs=226.0
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCCh-----HHHHHHHHHHHHHHhcCCCCeeeecceeeecCC
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEP-----ESVRFMAREILILRRLDHPNIIKLEGLITSRLS 203 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 203 (478)
.+.|.+.+.||+|+||.|-+|.++.+++.||||++++..... .....+.+|++||++|+|||||+++++|+. .
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~--~ 248 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV--P 248 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec--C
Confidence 567889999999999999999999999999999998765432 122345689999999999999999999988 6
Q ss_pred ceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecC---CcEEEeecccccc
Q 011763 204 CSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE---GVLKLADFGLANF 280 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~---~~vkl~DFG~a~~ 280 (478)
.+.||||||++|+.+....-.++.+.+..-+.+++||+.||.|||++||+||||||+||||..+ -.+||+|||+|+.
T Consensus 249 ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~ 328 (475)
T KOG0615|consen 249 DSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKV 328 (475)
T ss_pred CceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhc
Confidence 7789999999998777777777789999999999999999999999999999999999999876 6799999999998
Q ss_pred cCCCCCCCccccccCCcccCcccccCC--CCCCChhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHcCCCCchhh
Q 011763 281 SNTGHRQPLTSRVVTLWYRPPELLLGA--TDYGPSVDLWSVGCVFAELLIGKPILQGRTEVE-QLHKIFKLCGSPPDDYW 357 (478)
Q Consensus 281 ~~~~~~~~~~~~~~t~~y~APE~l~~~--~~~~~~~DiwslG~il~elltG~~pf~~~~~~~-~~~~i~~~~g~~~~~~~ 357 (478)
.+.. ..+.+.||||.|.|||++.+. ..+..++|||||||+||-+++|.+||....... ..++|...-....+..
T Consensus 329 ~g~~--sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~- 405 (475)
T KOG0615|consen 329 SGEG--SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQ- 405 (475)
T ss_pred cccc--eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChh-
Confidence 8743 566789999999999999752 235558999999999999999999999876555 5566654332222223
Q ss_pred ccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCCC
Q 011763 358 KKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYA 422 (478)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~~ 422 (478)
|..+++++++||.+||.+||++|||++|+|+||||+..+..
T Consensus 406 ------------------------w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~~ 446 (475)
T KOG0615|consen 406 ------------------------WDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPCL 446 (475)
T ss_pred ------------------------hhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccccc
Confidence 35789999999999999999999999999999999976643
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.4e-57 Score=451.56 Aligned_cols=257 Identities=31% Similarity=0.494 Sum_probs=233.8
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.+|+..+.||+|+|++||.+++..+|+.||+|++.+..+ .....+.+.+||+|.+.|+|||||+++++|++ ..++||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FED--s~nVYi 95 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFED--SNNVYI 95 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeec--CCceEE
Confidence 469999999999999999999999999999999987554 45667888999999999999999999999998 788999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
|+|+|..+.+..+....++++|.+++.+++||+.||.|||+++|||||||..||||+++.+|||+|||+|....... ..
T Consensus 96 vLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~-Er 174 (592)
T KOG0575|consen 96 VLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG-ER 174 (592)
T ss_pred EEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcc-cc
Confidence 99999998888888888899999999999999999999999999999999999999999999999999998877443 33
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF 368 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 368 (478)
..+.||||.|+|||++.. ..++..+||||+|||||.||+|+|||...+..+++.+|...-...|
T Consensus 175 k~TlCGTPNYIAPEVl~k-~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P--------------- 238 (592)
T KOG0575|consen 175 KKTLCGTPNYIAPEVLNK-SGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMP--------------- 238 (592)
T ss_pred cceecCCCcccChhHhcc-CCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccc---------------
Confidence 366899999999999986 6789999999999999999999999999999999999976443333
Q ss_pred CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 369 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 369 ~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
..++.++++||.+||+.||.+|||++++|.|+||+..
T Consensus 239 --------------~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g 275 (592)
T KOG0575|consen 239 --------------SHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG 275 (592)
T ss_pred --------------cccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence 2688999999999999999999999999999999653
No 8
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-56 Score=423.60 Aligned_cols=262 Identities=31% Similarity=0.495 Sum_probs=233.0
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCC-hHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFE-PESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
.++|++++.||+|+||+||+++.+++++.||+|++++.... ....+.+..|..||..++||+||+++..|++ ...+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt--~~kLy 101 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQT--EEKLY 101 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEeccc--CCeEE
Confidence 67899999999999999999999999999999999877653 3356778899999999999999999888887 78899
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
||+||+.|+.|..++++...|++..++.|+.+|+.||.|||++|||||||||+||||+.+|+++|+|||+++..-... .
T Consensus 102 lVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~-~ 180 (357)
T KOG0598|consen 102 LVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG-D 180 (357)
T ss_pred EEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCC-C
Confidence 999999999888888888899999999999999999999999999999999999999999999999999998544332 3
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccc
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATL 367 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 367 (478)
...+.|||+.|||||++.+ ..|+.++|+||||+++|||++|.+||.+.+.....++|...-...++
T Consensus 181 ~t~tfcGT~eYmAPEil~~-~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p------------- 246 (357)
T KOG0598|consen 181 ATRTFCGTPEYMAPEILLG-KGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPP------------- 246 (357)
T ss_pred ccccccCCccccChHHHhc-CCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCC-------------
Confidence 4456899999999999997 68999999999999999999999999999999998888653211111
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCcc----CHHHHHhCcccCCCCCC
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRA----TASAALASEYFSTKPYA 422 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~----ta~e~L~hp~f~~~~~~ 422 (478)
..++.++++||+++|..||++|. .+.++-+||||....|.
T Consensus 247 ---------------~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~ 290 (357)
T KOG0598|consen 247 ---------------GYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWE 290 (357)
T ss_pred ---------------ccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHH
Confidence 23789999999999999999995 78999999999987764
No 9
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-56 Score=422.05 Aligned_cols=294 Identities=36% Similarity=0.594 Sum_probs=250.9
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeee---cCCceE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITS---RLSCSI 206 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~---~~~~~~ 206 (478)
..|..++.||.|+||.|+.+.++.+|+.||||++..........++..+|+++|+.++|+||+.+.+++.. ..-..+
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv 101 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV 101 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence 45777899999999999999999999999999998555566777888999999999999999999999865 234568
Q ss_pred EEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC-C
Q 011763 207 YLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG-H 285 (478)
Q Consensus 207 ~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~-~ 285 (478)
|+|+|+|+.+|...+. .+..|++..+..++.||+.||.|+|+.+|+||||||.|+|++.+..+||||||+|+..... .
T Consensus 102 YiV~elMetDL~~iik-~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~ 180 (359)
T KOG0660|consen 102 YLVFELMETDLHQIIK-SQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFE 180 (359)
T ss_pred EEehhHHhhHHHHHHH-cCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCc
Confidence 9999999776666554 4446999999999999999999999999999999999999999999999999999877532 2
Q ss_pred CCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 286 RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 286 ~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
....+..+.|.||+|||++.....|+.++||||+||||.||++|++.|.|.+..+++..|.+.+|.|+++.+....-..+
T Consensus 181 ~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~a 260 (359)
T KOG0660|consen 181 DGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKA 260 (359)
T ss_pred ccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHH
Confidence 24457788899999999998888999999999999999999999999999999999999999999999888776543222
Q ss_pred cccC--CCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCCCCC
Q 011763 366 TLFK--PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYACD 424 (478)
Q Consensus 366 ~~~~--~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~~~~ 424 (478)
..+. ..+.....+...|+..++.++||+.+||..||.+|+|++|+|+||||.....+.+
T Consensus 261 r~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~d 321 (359)
T KOG0660|consen 261 RPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPED 321 (359)
T ss_pred HHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCcc
Confidence 2111 1122233466778999999999999999999999999999999999987554443
No 10
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=5e-55 Score=414.89 Aligned_cols=293 Identities=42% Similarity=0.735 Sum_probs=251.8
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCC-eeeecceeeecC----C
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPN-IIKLEGLITSRL----S 203 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~----~ 203 (478)
...|+.+++||+|+||+||+|+++.+|+.||+|+++.+...+..-....+|+.+|+.|+|+| ||+|++++.... .
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 44699999999999999999999999999999999987543233345678999999999999 999999997642 2
Q ss_pred ceEEEEEeeccCCchhhccCCC---CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccc
Q 011763 204 CSIYLVFEYMEHDITGLLSCPD---IKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANF 280 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~~---~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~ 280 (478)
..++||+||++-++...+.... ..++...++.+++||+.||+|||+++|+||||||.||||+++|.+||+|||+|+.
T Consensus 90 ~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra 169 (323)
T KOG0594|consen 90 GKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARA 169 (323)
T ss_pred ceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHH
Confidence 3789999999998877776554 4688899999999999999999999999999999999999999999999999986
Q ss_pred cCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccC
Q 011763 281 SNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKS 360 (478)
Q Consensus 281 ~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 360 (478)
..... ...+..++|.||+|||++.+...|+..+||||+|||++||+++++.|.+..+.+++..|++.+|.|.+..|+..
T Consensus 170 ~~ip~-~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v 248 (323)
T KOG0594|consen 170 FSIPM-RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGV 248 (323)
T ss_pred hcCCc-ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCc
Confidence 65332 34677889999999999999889999999999999999999999999999999999999999999999999874
Q ss_pred -CCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCCC
Q 011763 361 -KLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYA 422 (478)
Q Consensus 361 -~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~~ 422 (478)
.+++.....+.......+....+...++..+|+.+||++||.+|+|+..+|.||||...+..
T Consensus 249 ~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~ 311 (323)
T KOG0594|consen 249 SSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEK 311 (323)
T ss_pred cccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccc
Confidence 34544443333333445555666777899999999999999999999999999999876544
No 11
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.9e-54 Score=426.90 Aligned_cols=279 Identities=32% Similarity=0.498 Sum_probs=238.8
Q ss_pred ccccccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC
Q 011763 125 VPLRADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLS 203 (478)
Q Consensus 125 ~~~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 203 (478)
..+..++|++++.||+|+||.||+|+.+.||..||+|++++..+ ...+++.+..|-.+|...++|+||+|+..|++ .
T Consensus 136 ~r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD--~ 213 (550)
T KOG0605|consen 136 TRLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQD--K 213 (550)
T ss_pred ccCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecC--C
Confidence 34568899999999999999999999999999999999998765 55667888899999999999999999988888 7
Q ss_pred ceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCC
Q 011763 204 CSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNT 283 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~ 283 (478)
.++||||||++||....++.....|+++.++.|+.+++.|++.||+.|+|||||||+|+|||..|++||+|||++.....
T Consensus 214 ~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 214 EYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred CeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhh
Confidence 89999999999998888888888999999999999999999999999999999999999999999999999999842210
Q ss_pred ----------------------CC-C-----------------------CCccccccCCcccCcccccCCCCCCChhhHH
Q 011763 284 ----------------------GH-R-----------------------QPLTSRVVTLWYRPPELLLGATDYGPSVDLW 317 (478)
Q Consensus 284 ----------------------~~-~-----------------------~~~~~~~~t~~y~APE~l~~~~~~~~~~Diw 317 (478)
.. . ....+.+|||.|+|||++.+ ..|+..+|+|
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~-kgY~~~cDwW 372 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG-KGYGKECDWW 372 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc-CCCCccccHH
Confidence 00 0 01123688999999999998 6799999999
Q ss_pred HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhcc-CCCCCccccCCCCCCCccchhcccCCchhHHHHHHHh
Q 011763 318 SVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKK-SKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL 396 (478)
Q Consensus 318 slG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~m 396 (478)
||||||||||.|.|||.+.+..++..+|+. |+. +.+|. -..++++++|||.+|
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~~T~rkI~n---------wr~~l~fP~-----------------~~~~s~eA~DLI~rl 426 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQETYRKIVN---------WRETLKFPE-----------------EVDLSDEAKDLITRL 426 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHH---------HhhhccCCC-----------------cCcccHHHHHHHHHH
Confidence 999999999999999999999999999976 221 11110 025678999999999
Q ss_pred cCCCCCCccC---HHHHHhCcccCCCCCCCCCCCCCCCCC
Q 011763 397 LSVEPYKRAT---ASAALASEYFSTKPYACDLSSLPIYPP 433 (478)
Q Consensus 397 L~~dP~~R~t---a~e~L~hp~f~~~~~~~~~~~~p~~~~ 433 (478)
|. ||.+|.- +.||-.||||+...|...-...|.+.|
T Consensus 427 l~-d~~~RLG~~G~~EIK~HPfF~~v~W~~l~~~~apfvP 465 (550)
T KOG0605|consen 427 LC-DPENRLGSKGAEEIKKHPFFKGVDWDHLREMPAPFVP 465 (550)
T ss_pred hc-CHHHhcCcccHHHHhcCCccccCCcchhhcCCCCCCC
Confidence 99 9999985 899999999998887665555444443
No 12
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-54 Score=411.47 Aligned_cols=258 Identities=29% Similarity=0.435 Sum_probs=226.1
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++.+.++.||+|..|+||+++++.+++.+|+|++.. ..+....+++.+|+++++.++|||||.+|+.|..... .++|
T Consensus 78 ~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~-~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~-~isI 155 (364)
T KOG0581|consen 78 LSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL-NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE-EISI 155 (364)
T ss_pred HHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc-cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc-eEEe
Confidence 4578999999999999999999999999999999954 3467888999999999999999999999999998533 6999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
+||||+++.++.+....+.++|..+..++.++++||.|||+ ++||||||||+||||+..|.|||||||.+...-. .
T Consensus 156 ~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvn---S 232 (364)
T KOG0581|consen 156 CMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVN---S 232 (364)
T ss_pred ehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhh---h
Confidence 99999999998888877889999999999999999999995 8999999999999999999999999999976643 2
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHHHHcCCCCchhhccCCC
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGR-----TEVEQLHKIFKLCGSPPDDYWKKSKL 362 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~-----~~~~~~~~i~~~~g~~~~~~~~~~~~ 362 (478)
...+.+||..|||||.+.+ ..|+.++||||||++++||.+|+.||... ...+.+..|+. .+|+..
T Consensus 233 ~a~tfvGT~~YMsPERi~g-~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~---~ppP~l------ 302 (364)
T KOG0581|consen 233 IANTFVGTSAYMSPERISG-ESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD---EPPPRL------ 302 (364)
T ss_pred hcccccccccccChhhhcC-CcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc---CCCCCC------
Confidence 5678899999999999998 78999999999999999999999999874 34455555433 232211
Q ss_pred CCccccCCCCCCCccchhccc-CCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCC
Q 011763 363 PHATLFKPQQPYDSSLRETFK-DLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKP 420 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~l~~~~~-~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~ 420 (478)
.. .+++++++||..||++||.+|+|+.|+|+|||+++..
T Consensus 303 -------------------P~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~ 342 (364)
T KOG0581|consen 303 -------------------PEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFE 342 (364)
T ss_pred -------------------CcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcc
Confidence 01 3789999999999999999999999999999998643
No 13
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-54 Score=424.48 Aligned_cols=263 Identities=32% Similarity=0.506 Sum_probs=232.2
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCceE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSCSI 206 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~ 206 (478)
.++|.+.+.||+|+|++|++|+++.+++.||||++.+..+ .+...+.+..|-.+|.+| .||.|++|+..|++ ...+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD--~~sL 149 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQD--EESL 149 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeec--ccce
Confidence 5689999999999999999999999999999999976654 233345567899999999 89999999888887 6789
Q ss_pred EEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 207 YLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 207 ~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
|+|+||++++.+..++..-+.|++..++.|+.||+.||+|||++|||||||||+||||+.|+++||+|||.|+.......
T Consensus 150 YFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~ 229 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQK 229 (604)
T ss_pred EEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhc
Confidence 99999999876666666777999999999999999999999999999999999999999999999999999987653221
Q ss_pred C------------CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCc
Q 011763 287 Q------------PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPD 354 (478)
Q Consensus 287 ~------------~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~ 354 (478)
. ...+++||-.|.+||+|.. ...++.+|||+||||||.|+.|.|||.+.++.-++++|+.+-...|
T Consensus 230 ~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~-~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp- 307 (604)
T KOG0592|consen 230 SQENPVDPNQASSRRSSFVGTAEYVSPELLND-SPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFP- 307 (604)
T ss_pred cccCccCcccccCcccceeeeecccCHHHhcC-CCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCC-
Confidence 1 1255899999999998876 7889999999999999999999999999999999999998654443
Q ss_pred hhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCCCC
Q 011763 355 DYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYAC 423 (478)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~~~ 423 (478)
+.+++.+.|||+++|..||..|+|+.|+-+||||....|..
T Consensus 308 ----------------------------~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~n 348 (604)
T KOG0592|consen 308 ----------------------------EGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWEN 348 (604)
T ss_pred ----------------------------CCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChhh
Confidence 36789999999999999999999999999999999876543
No 14
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-56 Score=397.57 Aligned_cols=289 Identities=30% Similarity=0.450 Sum_probs=250.1
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.+.|++.+.||+|.|+.|+++.+..+|+.+|+|+++...+.....+.+.+|+.|.+.|+|||||+|++.+.+ ..+.||
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~--~~~~yl 87 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE--ESFHYL 87 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcc--cceeEE
Confidence 678999999999999999999999999999999999888888888999999999999999999999998877 778999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecC---CcEEEeecccccccCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE---GVLKLADFGLANFSNTGH 285 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~---~~vkl~DFG~a~~~~~~~ 285 (478)
|+|+|.|+.+..-+.....+++..+..+++||+++|+|+|.+||||||+||+|+||-.. -.+||+|||+|...+.
T Consensus 88 vFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~-- 165 (355)
T KOG0033|consen 88 VFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND-- 165 (355)
T ss_pred EEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCC--
Confidence 99999986554444444678999999999999999999999999999999999999644 4699999999988773
Q ss_pred CCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 286 RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 286 ~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
......++|||.|||||++.. .+|+..+|||+.|||||-|+.|.+||.+.+..+.+++|+..-...+...|
T Consensus 166 g~~~~G~~GtP~fmaPEvvrk-dpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w-------- 236 (355)
T KOG0033|consen 166 GEAWHGFAGTPGYLSPEVLKK-DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEW-------- 236 (355)
T ss_pred ccccccccCCCcccCHHHhhc-CCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCccc--------
Confidence 345567899999999999986 78999999999999999999999999999999999999876555555444
Q ss_pred cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCCCCCCCCCCCCCCChhhhhhhhHHH
Q 011763 366 TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYACDLSSLPIYPPSKEIDAKHREDA 445 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 445 (478)
+.+++++++||++||..||.+|+|+.|+|+|||+.+...-. -...-...++...+-++
T Consensus 237 -----------------~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~~~A-----s~~H~~dtvd~lrkfNa 294 (355)
T KOG0033|consen 237 -----------------DTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRERVA-----SAIHRQDTVDCLKKFNA 294 (355)
T ss_pred -----------------CcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcchHHHH-----HHhhhHHHHHHHHHhhH
Confidence 68999999999999999999999999999999997632111 12244567888888888
Q ss_pred HhhhcCC
Q 011763 446 RRKKVGG 452 (478)
Q Consensus 446 ~~~~~~~ 452 (478)
+||-.+.
T Consensus 295 rRKLKga 301 (355)
T KOG0033|consen 295 RRKLKGA 301 (355)
T ss_pred HHHHHHH
Confidence 8875443
No 15
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.7e-54 Score=408.36 Aligned_cols=280 Identities=39% Similarity=0.656 Sum_probs=239.3
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCc---eEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSC---SIY 207 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~---~~~ 207 (478)
.|...+.+|.|+||.||.|....+++.||||++-.+.- .-.+|+++|+.++|||||+|..+|....+. +..
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r------~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR------YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC------cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence 69999999999999999999999999999999865431 123699999999999999999888654444 567
Q ss_pred EEEeeccCCchhhccC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecC-CcEEEeecccccccCC
Q 011763 208 LVFEYMEHDITGLLSC---PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE-GVLKLADFGLANFSNT 283 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~---~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~-~~vkl~DFG~a~~~~~ 283 (478)
||||||+.++...+.. .+..++...++-|+.||++||.|||+.||+||||||.|||+|.+ |.+||||||.|+....
T Consensus 99 lVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~ 178 (364)
T KOG0658|consen 99 LVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVK 178 (364)
T ss_pred HHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeecc
Confidence 8999999988776653 46678999999999999999999999999999999999999987 9999999999998765
Q ss_pred CCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCC
Q 011763 284 GHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP 363 (478)
Q Consensus 284 ~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 363 (478)
+ .+..++..|..|+|||.+++...|+.+.||||.||++.||+-|++.|.|++..+++..|++.+|.|..+.....+..
T Consensus 179 ~--epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~ 256 (364)
T KOG0658|consen 179 G--EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPN 256 (364)
T ss_pred C--CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcc
Confidence 5 33467788999999999999999999999999999999999999999999999999999999999998877665433
Q ss_pred CccccCCCCCCCccchh-cccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 364 HATLFKPQQPYDSSLRE-TFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 364 ~~~~~~~~~~~~~~l~~-~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
.. .+...+.....+.+ .+...++++.+|+.++|.++|.+|.++.|+|.||||++.
T Consensus 257 y~-~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdel 312 (364)
T KOG0658|consen 257 YT-EFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDEL 312 (364)
T ss_pred cc-cccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHh
Confidence 22 22222222233333 447899999999999999999999999999999999864
No 16
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-53 Score=392.81 Aligned_cols=261 Identities=25% Similarity=0.425 Sum_probs=235.0
Q ss_pred ccccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCce
Q 011763 127 LRADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCS 205 (478)
Q Consensus 127 ~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 205 (478)
...++|++++.||.|+||.|.+++++.+|..||+|++++... ...+.+...+|..+|+.+.||+++++++.|.+ ..+
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d--~~~ 118 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKD--NSN 118 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeecc--CCe
Confidence 457899999999999999999999999999999999987654 45667778899999999999999999988877 788
Q ss_pred EEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC
Q 011763 206 IYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH 285 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~ 285 (478)
+||||||++|+.+..+++..++|++..++.|+.||+.||+|||+++|++|||||+|||||.+|.+||+|||+|+.....
T Consensus 119 lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r- 197 (355)
T KOG0616|consen 119 LYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR- 197 (355)
T ss_pred EEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCc-
Confidence 9999999999988888888889999999999999999999999999999999999999999999999999999877642
Q ss_pred CCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 286 RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 286 ~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
..+.||||.|+|||++.. ++|+.++|+|+|||++|||+.|.+||...+...+.++|.+.--..|
T Consensus 198 ---T~TlCGTPeYLAPEii~s-k~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP------------ 261 (355)
T KOG0616|consen 198 ---TWTLCGTPEYLAPEIIQS-KGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFP------------ 261 (355)
T ss_pred ---EEEecCCccccChHHhhc-CCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCC------------
Confidence 456799999999999986 8899999999999999999999999999999999999987432222
Q ss_pred cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCcc-----CHHHHHhCcccCCCCCCC
Q 011763 366 TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRA-----TASAALASEYFSTKPYAC 423 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~-----ta~e~L~hp~f~~~~~~~ 423 (478)
..++.++++||..+|++|-.+|. -..++-.||||+...|..
T Consensus 262 -----------------~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~ 307 (355)
T KOG0616|consen 262 -----------------SYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEA 307 (355)
T ss_pred -----------------cccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHH
Confidence 35789999999999999999994 467899999999876643
No 17
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.3e-52 Score=397.73 Aligned_cols=276 Identities=27% Similarity=0.370 Sum_probs=234.7
Q ss_pred cccccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCC-hHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCc
Q 011763 126 PLRADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFE-PESVRFMAREILILRRLDHPNIIKLEGLITSRLSC 204 (478)
Q Consensus 126 ~~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 204 (478)
.+..+.|++++.||.|.-|+||+++...++..+|+|++.++.+. .....++..|.+||+.++||+++.||..|+. .+
T Consensus 73 ~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet--~~ 150 (459)
T KOG0610|consen 73 SLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFET--DK 150 (459)
T ss_pred ccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeec--cc
Confidence 45578999999999999999999999999999999999877653 4445667789999999999999999999988 78
Q ss_pred eEEEEEeeccCCchhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccC
Q 011763 205 SIYLVFEYMEHDITGLLSC--PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSN 282 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~ 282 (478)
++||+||||+|+.+..+++ +...|++..++.|+.+++.||+|||..|||+|||||+||||.++|+|.|+||.++..+.
T Consensus 151 ~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~ 230 (459)
T KOG0610|consen 151 YSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCP 230 (459)
T ss_pred eeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCC
Confidence 9999999999987776654 55679999999999999999999999999999999999999999999999999974321
Q ss_pred C---------------------------------C-C---------------------CCCccccccCCcccCcccccCC
Q 011763 283 T---------------------------------G-H---------------------RQPLTSRVVTLWYRPPELLLGA 307 (478)
Q Consensus 283 ~---------------------------------~-~---------------------~~~~~~~~~t~~y~APE~l~~~ 307 (478)
. . . .....+.+||..|+|||++.|
T Consensus 231 ~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G- 309 (459)
T KOG0610|consen 231 VSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG- 309 (459)
T ss_pred CCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeec-
Confidence 0 0 0 011234688999999999998
Q ss_pred CCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCch
Q 011763 308 TDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPT 387 (478)
Q Consensus 308 ~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 387 (478)
...+.++|||+|||+|||||.|..||++.+..+++.+|+..--..|. .+.++.
T Consensus 310 ~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~---------------------------~~~vs~ 362 (459)
T KOG0610|consen 310 EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPE---------------------------EPEVSS 362 (459)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCC---------------------------CCcchh
Confidence 66799999999999999999999999999999999998653211111 125678
Q ss_pred hHHHHHHHhcCCCCCCccC----HHHHHhCcccCCCCCCCCCCCCCCC
Q 011763 388 TAVNLIETLLSVEPYKRAT----ASAALASEYFSTKPYACDLSSLPIY 431 (478)
Q Consensus 388 ~l~~Li~~mL~~dP~~R~t----a~e~L~hp~f~~~~~~~~~~~~p~~ 431 (478)
.++|||+++|.+||++|+- |.||-+||||+...|+......|.+
T Consensus 363 ~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~~~PP~ 410 (459)
T KOG0610|consen 363 AAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRCARPPE 410 (459)
T ss_pred HHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhheeccCCCc
Confidence 9999999999999999998 9999999999999987655544444
No 18
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-52 Score=398.45 Aligned_cols=261 Identities=30% Similarity=0.486 Sum_probs=230.3
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
..+|.+.+.||.|+|++||+|+++.++..||||.+....+.....+.+..|++||+.++|||||.+++++.. .+++||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~--~~~i~l 86 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIED--DDFIYL 86 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEec--CCeEEE
Confidence 568999999999999999999999999999999999888888889999999999999999999999999988 779999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecC------CcEEEeecccccccC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE------GVLKLADFGLANFSN 282 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~------~~vkl~DFG~a~~~~ 282 (478)
|||||.|+.+..+....+.+++..++.++.||+.||++||+++||||||||.||||+.. -.+||+|||+|+...
T Consensus 87 VMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~ 166 (429)
T KOG0595|consen 87 VMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQ 166 (429)
T ss_pred EEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCC
Confidence 99999998888888878799999999999999999999999999999999999999875 358999999999887
Q ss_pred CCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCC
Q 011763 283 TGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL 362 (478)
Q Consensus 283 ~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 362 (478)
.. ....+.+|++.|||||++.. ..|+.|+|+||+|+|||+|++|++||...+..+.+..+.......|
T Consensus 167 ~~--~~a~tlcGSplYMAPEV~~~-~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~--------- 234 (429)
T KOG0595|consen 167 PG--SMAETLCGSPLYMAPEVIMS-QQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVP--------- 234 (429)
T ss_pred ch--hHHHHhhCCccccCHHHHHh-ccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccC---------
Confidence 54 44567899999999999975 7899999999999999999999999999999888775543221111
Q ss_pred CCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCC
Q 011763 363 PHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKP 420 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~ 420 (478)
.....+++...+|+..+|..+|..|.+..+-+.|+++...+
T Consensus 235 -----------------~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 235 -----------------VLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred -----------------chhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 00124566778999999999999999999999999987654
No 19
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.2e-51 Score=417.54 Aligned_cols=281 Identities=28% Similarity=0.524 Sum_probs=233.9
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcC-C-----CCeeeecceeeecCCc
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLD-H-----PNIIKLEGLITSRLSC 204 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~-h-----~nIv~l~~~~~~~~~~ 204 (478)
+|++++.||+|+||.|.+|++..|++.||||+++.. .....+...|+.||..|+ | -|+|+++++|.. .+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~---k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f--r~ 261 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK---KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF--RN 261 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC---hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc--cc
Confidence 689999999999999999999999999999999754 355556677999999996 4 489999999998 78
Q ss_pred eEEEEEeeccCCchhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCC--cEEEeeccccccc
Q 011763 205 SIYLVFEYMEHDITGLLSCPD-IKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG--VLKLADFGLANFS 281 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~--~vkl~DFG~a~~~ 281 (478)
++|||+|.+.-+|.+++..++ ..|+...++.++.||+.||.+||+.+|||+|||||||||.+.+ .|||+|||.|+..
T Consensus 262 HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 262 HLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred ceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 899999999999988887654 3589999999999999999999999999999999999998654 7999999999876
Q ss_pred CCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCC
Q 011763 282 NTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK 361 (478)
Q Consensus 282 ~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 361 (478)
... . .+++.+..|+|||+|+| .+|+.+.||||||||++||++|.|+|.|.++.+++..|++.+|.||....+..+
T Consensus 342 ~q~---v-ytYiQSRfYRAPEVILG-lpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~ 416 (586)
T KOG0667|consen 342 SQR---V-YTYIQSRFYRAPEVILG-LPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAK 416 (586)
T ss_pred CCc---c-eeeeeccccccchhhcc-CCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhcc
Confidence 542 2 36788999999999998 889999999999999999999999999999999999999999999987665432
Q ss_pred CCCccccC--------------------------------CCCC-CCccchhccc-CCchhHHHHHHHhcCCCCCCccCH
Q 011763 362 LPHATLFK--------------------------------PQQP-YDSSLRETFK-DLPTTAVNLIETLLSVEPYKRATA 407 (478)
Q Consensus 362 ~~~~~~~~--------------------------------~~~~-~~~~l~~~~~-~~~~~l~~Li~~mL~~dP~~R~ta 407 (478)
..+..+.. -..+ ....+...+. .....+.|||.+||.+||.+|+|+
T Consensus 417 ~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp 496 (586)
T KOG0667|consen 417 KAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITP 496 (586)
T ss_pred ccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCH
Confidence 21111100 0001 1112222222 334568999999999999999999
Q ss_pred HHHHhCcccCCCCC
Q 011763 408 SAALASEYFSTKPY 421 (478)
Q Consensus 408 ~e~L~hp~f~~~~~ 421 (478)
.|+|+||||+....
T Consensus 497 ~qal~Hpfl~~~~~ 510 (586)
T KOG0667|consen 497 AQALNHPFLTGTSL 510 (586)
T ss_pred HHHhcCcccccccc
Confidence 99999999985433
No 20
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-51 Score=398.16 Aligned_cols=264 Identities=31% Similarity=0.470 Sum_probs=226.9
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCCh------------HHHHHHHHHHHHHHhcCCCCeeeecc
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEP------------ESVRFMAREILILRRLDHPNIIKLEG 196 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~------------~~~~~~~~E~~~l~~l~h~nIv~l~~ 196 (478)
+++|++++.||+|.||.|-+|++..+++.||||++.+..+.. ...+...+||.||++|+|||||+|++
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE 175 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE 175 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence 679999999999999999999999999999999997643211 11357889999999999999999999
Q ss_pred eeeecCCceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecc
Q 011763 197 LITSRLSCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFG 276 (478)
Q Consensus 197 ~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG 276 (478)
+..++....+|||+|||..+...........|++.+++.|+++++.||+|||.+|||||||||+|+||+++|++||+|||
T Consensus 176 vLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFG 255 (576)
T KOG0585|consen 176 VLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFG 255 (576)
T ss_pred eecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccc
Confidence 99999999999999999987776665554449999999999999999999999999999999999999999999999999
Q ss_pred cccccCCC----CCCCccccccCCcccCcccccC---CCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHc
Q 011763 277 LANFSNTG----HRQPLTSRVVTLWYRPPELLLG---ATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLC 349 (478)
Q Consensus 277 ~a~~~~~~----~~~~~~~~~~t~~y~APE~l~~---~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~ 349 (478)
.+...... ....+...+|||.|+|||.+.+ ....+.+.|||||||+||.|+.|+.||.++...+...+|+..-
T Consensus 256 Vs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~p 335 (576)
T KOG0585|consen 256 VSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDP 335 (576)
T ss_pred eeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCc
Confidence 99766322 1122344689999999999876 2345778999999999999999999999999999999997632
Q ss_pred CCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 350 GSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 350 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
-..| ..+.+.+.++|||.+||++||++|+++.++-.|||....
T Consensus 336 L~fP---------------------------~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 336 LEFP---------------------------ENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred ccCC---------------------------CcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 2221 123678899999999999999999999999999999754
No 21
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.2e-50 Score=396.86 Aligned_cols=283 Identities=39% Similarity=0.713 Sum_probs=235.6
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|+++++||.|+||+||+|++..+++.||+|+++.... ......+.+|+.+++.++||||+++++++.. ....|+
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~l 80 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKNLKHANIVTLHDIIHT--ERCLTL 80 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc-CCcchhHHHHHHHHHhCCCCCEeeEEEEEcC--CCeEEE
Confidence 5689999999999999999999999999999999975432 2223456789999999999999999999876 567999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||||+++++...+......+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~-~~ 159 (288)
T cd07871 81 VFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPT-KT 159 (288)
T ss_pred EEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCC-cc
Confidence 99999987777666555568999999999999999999999999999999999999999999999999997543322 22
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC--cc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH--AT 366 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~--~~ 366 (478)
.....+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+...++.++...|....... ..
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07871 160 YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRS 239 (288)
T ss_pred ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhc
Confidence 2345678999999998776678999999999999999999999999999999999999999999999887643221 11
Q ss_pred ccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 367 LFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 367 ~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
...+.. ....+....+.++.++++||.+||++||.+|||+.|+|+||||
T Consensus 240 ~~~~~~-~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 240 YLFPQY-RAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred cccCcc-CCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 111111 1112223345678999999999999999999999999999998
No 22
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-50 Score=405.75 Aligned_cols=257 Identities=32% Similarity=0.505 Sum_probs=222.9
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCC---hHHHHHHHHHHHHHHhcC-CCCeeeecceeeecCCc
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFE---PESVRFMAREILILRRLD-HPNIIKLEGLITSRLSC 204 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~---~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~ 204 (478)
...|.+.+.||+|+||+|++|++..++..||+|+++..... ....+.+.+|+.++++++ ||||+++++++.. ..
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t--~~ 93 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFAT--PT 93 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEec--CC
Confidence 56899999999999999999999999999999988765221 133556778999999998 9999999999988 55
Q ss_pred eEEEEEeeccCC-chhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecC-CcEEEeecccccccC
Q 011763 205 SIYLVFEYMEHD-ITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE-GVLKLADFGLANFSN 282 (478)
Q Consensus 205 ~~~lv~e~~~~~-ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~-~~vkl~DFG~a~~~~ 282 (478)
.+|+||||+.++ +++.+.. .+++.|..++.+++||+.||+|||++||+||||||+|||++.+ +++||+|||++....
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence 699999999985 5555554 7899999999999999999999999999999999999999999 999999999998774
Q ss_pred CCCCCCccccccCCcccCcccccCCC-CCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCC
Q 011763 283 TGHRQPLTSRVVTLWYRPPELLLGAT-DYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK 361 (478)
Q Consensus 283 ~~~~~~~~~~~~t~~y~APE~l~~~~-~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 361 (478)
.......+.+||+.|+|||++.+.. +.+.++||||+||+||.|++|+.||...+......+|...-...|
T Consensus 173 -~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p-------- 243 (370)
T KOG0583|consen 173 -GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIP-------- 243 (370)
T ss_pred -CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCC--------
Confidence 2335667889999999999998855 446899999999999999999999999888888877655322222
Q ss_pred CCCccccCCCCCCCccchhcccCC-chhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 362 LPHATLFKPQQPYDSSLRETFKDL-PTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 362 ~~~~~~~~~~~~~~~~l~~~~~~~-~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
..+ +.++++||.+||..||.+|+|+.++++||||+.
T Consensus 244 ---------------------~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 244 ---------------------SYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred ---------------------CCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 134 899999999999999999999999999999997
No 23
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-51 Score=412.09 Aligned_cols=265 Identities=26% Similarity=0.415 Sum_probs=233.6
Q ss_pred ccccccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecC
Q 011763 125 VPLRADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRL-DHPNIIKLEGLITSRL 202 (478)
Q Consensus 125 ~~~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 202 (478)
.++..++|.+++.||+|.||+|+++..+.+++.||||+++++.. ..+.++.+..|..|+... +||++++|+..|+.
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT-- 440 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQT-- 440 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccccc--
Confidence 35668899999999999999999999999999999999998765 567788888999999888 59999999999988
Q ss_pred CceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccC
Q 011763 203 SCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSN 282 (478)
Q Consensus 203 ~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~ 282 (478)
..++|+||||+.|+.+ .+......|++..++.|+..|+.||.|||++||||||||.+|||||.+|++||+|||+++..-
T Consensus 441 ~~~l~fvmey~~Ggdm-~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 441 KEHLFFVMEYVAGGDL-MHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred CCeEEEEEEecCCCcE-EEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccC
Confidence 7899999999999884 344455689999999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCC
Q 011763 283 TGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL 362 (478)
Q Consensus 283 ~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 362 (478)
... ....+.+|||.|||||++.+ ..|+.++|+|+|||+|||||.|.+||.++++.+....|+..--..|
T Consensus 520 ~~g-~~TsTfCGTpey~aPEil~e-~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP--------- 588 (694)
T KOG0694|consen 520 GQG-DRTSTFCGTPEFLAPEVLTE-QSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYP--------- 588 (694)
T ss_pred CCC-CccccccCChhhcChhhhcc-CcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCC---------
Confidence 222 34577899999999999987 7899999999999999999999999999999999999876321111
Q ss_pred CCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccC-----HHHHHhCcccCCCCCCC
Q 011763 363 PHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT-----ASAALASEYFSTKPYAC 423 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t-----a~e~L~hp~f~~~~~~~ 423 (478)
..++.++.++|++||..+|++|.- +.+|..||||++..|..
T Consensus 589 --------------------~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~ 634 (694)
T KOG0694|consen 589 --------------------RFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDD 634 (694)
T ss_pred --------------------CcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHH
Confidence 257899999999999999999985 58899999999887643
No 24
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-51 Score=351.75 Aligned_cols=285 Identities=42% Similarity=0.742 Sum_probs=253.6
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
.+|...++||+|.||+||++++..+++.||+|.++.+..+...-....+||-+|+.|.|.|||+++++... +..+-||
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhs--dkkltlv 79 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS--DKKLTLV 79 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhcc--CceeEEe
Confidence 36888899999999999999999999999999999887665555667899999999999999999999876 6678999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL 289 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 289 (478)
+|||...+...+..-++.+..+.++.++.|++.||.|+|++++.||||||.|+||+.+|.+||+|||+++.++... ...
T Consensus 80 fe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipv-rcy 158 (292)
T KOG0662|consen 80 FEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV-RCY 158 (292)
T ss_pred HHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCce-Eee
Confidence 9999999888888888899999999999999999999999999999999999999999999999999998776532 234
Q ss_pred cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCC-CCCccc
Q 011763 290 TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK-LPHATL 367 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~-~~~~~~ 367 (478)
...+.|.||++|.++++.+-|+...|+||.|||+.||.. |+|+|.+.+..+++.+|+..+|.|.++.|+... +++. .
T Consensus 159 saevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdy-k 237 (292)
T KOG0662|consen 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDY-K 237 (292)
T ss_pred eceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCC-c
Confidence 556779999999999999999999999999999999986 999999999999999999999999999998754 4433 3
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
..|..+....+....+.+...-+||+.++|.-+|.+|++++++|+||||..
T Consensus 238 ~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d 288 (292)
T KOG0662|consen 238 PYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSD 288 (292)
T ss_pred ccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccc
Confidence 334444455667777888889999999999999999999999999999975
No 25
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.3e-51 Score=411.32 Aligned_cols=257 Identities=26% Similarity=0.449 Sum_probs=230.3
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecC-CCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFD-NFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
-|++.+.||.|+.|.|-+|++..||+.+|||++.+. .........+.+||-||+.+.||||+++|+++++ ..++|||
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~--~~~lylv 90 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWEN--KQHLYLV 90 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeecc--CceEEEE
Confidence 588999999999999999999999999999999876 4455556678899999999999999999999988 7789999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL 289 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 289 (478)
+||+++|-+..+....++|++.++.++++||+.|+.|||..+|+||||||+|+||+..+++||+|||+|..-.++ ..+
T Consensus 91 lEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g--klL 168 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPG--KLL 168 (786)
T ss_pred EEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCC--ccc
Confidence 999999877777777789999999999999999999999999999999999999999999999999999765443 556
Q ss_pred cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccC
Q 011763 290 TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFK 369 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 369 (478)
.+.||.|.|.|||++.|..+.+.++||||.|||||.||+|+.||.+++....+.++.......|
T Consensus 169 eTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MP---------------- 232 (786)
T KOG0588|consen 169 ETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMP---------------- 232 (786)
T ss_pred cccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCC----------------
Confidence 7789999999999999977778999999999999999999999998888777887765433332
Q ss_pred CCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCC
Q 011763 370 PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKP 420 (478)
Q Consensus 370 ~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~ 420 (478)
..++.++++||++||.+||.+|+|..|+++|||+..-.
T Consensus 233 -------------s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~ 270 (786)
T KOG0588|consen 233 -------------SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYT 270 (786)
T ss_pred -------------CcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCC
Confidence 36899999999999999999999999999999998643
No 26
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=7.5e-50 Score=390.41 Aligned_cols=284 Identities=35% Similarity=0.593 Sum_probs=233.9
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
++|++.+.||+|+||+||++++..+++.||+|++..........+.+.+|+.+++.++||||+++++++.. ...+|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 78 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRR--RGKLYLV 78 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEec--CCEEEEE
Confidence 37999999999999999999999999999999998665444556677889999999999999999999977 6789999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL 289 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 289 (478)
|||++++++..+......+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||++...........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (287)
T cd07848 79 FEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANY 158 (287)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccc
Confidence 99999988877766566799999999999999999999999999999999999999999999999999976644333333
Q ss_pred cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC---cc
Q 011763 290 TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH---AT 366 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~---~~ 366 (478)
....+|+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+....+..+...+....... ..
T Consensus 159 ~~~~~~~~y~aPE~~~~-~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07848 159 TEYVATRWYRSPELLLG-APYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGL 237 (287)
T ss_pred cccccccccCCcHHHcC-CCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhccc
Confidence 44567999999999876 568999999999999999999999999998888888888888887766554321100 00
Q ss_pred ccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 367 LFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 367 ~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
..................++.++.+||.+||++||++|||++|+|+||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 238 RFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred ccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 00000001111122234578899999999999999999999999999998
No 27
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.9e-49 Score=391.09 Aligned_cols=288 Identities=38% Similarity=0.672 Sum_probs=231.2
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|++++.||+|+||+||+|++..+++.||+|++...... .....+.+|+.+++.++||||+++++++.. ....|+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~l 80 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE-GTPFTAIREASLLKGLKHANIVLLHDIIHT--KETLTL 80 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc-ccchhHHHHHHHHhhCCCCCcCeEEEEEec--CCeEEE
Confidence 56899999999999999999999999999999999754322 223456689999999999999999999987 578999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||||+.++++..+......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ..
T Consensus 81 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~ 159 (303)
T cd07869 81 VFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS-HT 159 (303)
T ss_pred EEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC-cc
Confidence 99999998888777666679999999999999999999999999999999999999999999999999987543221 22
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHcCCCCchhhccCCC-CCcc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRT-EVEQLHKIFKLCGSPPDDYWKKSKL-PHAT 366 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~-~~~~~~~i~~~~g~~~~~~~~~~~~-~~~~ 366 (478)
.....+|+.|+|||++.+...++.++|||||||++|+|++|.+||.+.. ..+.+..+...++.+....|..... +...
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (303)
T cd07869 160 YSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFK 239 (303)
T ss_pred CCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccc
Confidence 3445679999999998765678999999999999999999999998754 4467777888888887777655321 1110
Q ss_pred ccCCCCCCCccchhccc--CCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCC
Q 011763 367 LFKPQQPYDSSLRETFK--DLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKP 420 (478)
Q Consensus 367 ~~~~~~~~~~~l~~~~~--~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~ 420 (478)
...........+...+. .+++.+.+||.+||++||.+|||+.|+|+||||++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 240 PERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred cccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence 00000011112222222 3567899999999999999999999999999998754
No 28
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=3.9e-50 Score=396.32 Aligned_cols=258 Identities=32% Similarity=0.505 Sum_probs=229.9
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
++|.+.+.||+|+||.||+|+.+.+.+.||+|.+.+........+.+.+|++|++.|+|||||.+++.|+. ..++|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt--~~~~~vV 79 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFET--SAHLWVV 79 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcc--cceEEEE
Confidence 57999999999999999999999999999999998877777778889999999999999999999999988 6789999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL 289 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 289 (478)
.||+.|+ +..++..+..++|+.++.++.|++.||.|||+++|+|||+||.||||...+++|+||||+|+..... ....
T Consensus 80 te~a~g~-L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~-t~vl 157 (808)
T KOG0597|consen 80 TEYAVGD-LFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN-TSVL 157 (808)
T ss_pred ehhhhhh-HHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccC-ceee
Confidence 9999995 4555566778999999999999999999999999999999999999999999999999999987653 3556
Q ss_pred cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccC
Q 011763 290 TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFK 369 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 369 (478)
+...|||.|||||++.+ .+|+..+|+||||||+|||+.|+|||......+..+.|...--.+|
T Consensus 158 tsikGtPlYmAPElv~e-~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p---------------- 220 (808)
T KOG0597|consen 158 TSIKGTPLYMAPELVEE-QPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPP---------------- 220 (808)
T ss_pred eeccCcccccCHHHHcC-CCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCc----------------
Confidence 77789999999999886 8899999999999999999999999998877777777754221111
Q ss_pred CCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCC
Q 011763 370 PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPY 421 (478)
Q Consensus 370 ~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~ 421 (478)
...+..+++||..+|.+||.+|+|=.++|.|||.+..-.
T Consensus 221 -------------~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~~ 259 (808)
T KOG0597|consen 221 -------------STASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKIN 259 (808)
T ss_pred -------------ccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhhh
Confidence 267889999999999999999999999999999986543
No 29
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.4e-48 Score=385.95 Aligned_cols=303 Identities=46% Similarity=0.770 Sum_probs=251.2
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|++.+.||.|+||.||+|.+..+++.||+|+++...........+.+|+.++++++|+||+++++++.......+|+
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 56899999999999999999999999999999999765433333334567999999999999999999987654567899
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||||+.+++...+......+++..+..++.||+.||.|||++|++|+||||+||+++.++.+||+|||++....... ..
T Consensus 86 v~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~-~~ 164 (309)
T cd07845 86 VMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA-KP 164 (309)
T ss_pred EEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc-CC
Confidence 99999987776666555679999999999999999999999999999999999999999999999999997665322 12
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCC-CCccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL-PHATL 367 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~-~~~~~ 367 (478)
......++.|+|||++.+...++.++|||||||++|+|++|++||...+..+.+..+...++.+....|+.... +....
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (309)
T cd07845 165 MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGK 244 (309)
T ss_pred CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccccccc
Confidence 23334578899999987656789999999999999999999999999999999999999999988888765332 21111
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCCCCCCCCCCCCC
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYACDLSSLPIYP 432 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~~~~~~~~p~~~ 432 (478)
+.........+...+..+++++.+||.+||.+||++|||+.++|.||||+..+.++.+..+|.+|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~~~~~~~~~~~ 309 (309)
T cd07845 245 FTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLPCEPEMMPTFP 309 (309)
T ss_pred ccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCCCCCCcCCCCC
Confidence 11111111233344556789999999999999999999999999999999999999988888875
No 30
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.8e-51 Score=372.98 Aligned_cols=250 Identities=30% Similarity=0.471 Sum_probs=216.4
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
..+|+++++||.|.||+||++++..+|..||+|.++.+.++......+..|+.+|++|+|||||++++.-..+....++|
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence 45799999999999999999999999999999999998888888889999999999999999999998433333455899
Q ss_pred EEeeccCCchhhcc----CCCCCCCHHHHHHHHHHHHHHHHHHHh--CC--ceeccCCCCcEEEecCCcEEEeecccccc
Q 011763 209 VFEYMEHDITGLLS----CPDIKFSEAQIKCYMNQLLHGLEHCHS--RG--VLHRDIKGSNLLVNNEGVLKLADFGLANF 280 (478)
Q Consensus 209 v~e~~~~~ll~~~~----~~~~~l~~~~~~~i~~qil~aL~~LH~--~g--ivHrDlkp~NILl~~~~~vkl~DFG~a~~ 280 (478)
|||||.++.+..+. .....+++..++.++.|++.||.++|. .. |+||||||.||+|+.+|.+||+|||+++.
T Consensus 98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 99999986665443 456679999999999999999999999 34 99999999999999999999999999998
Q ss_pred cCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccC
Q 011763 281 SNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKS 360 (478)
Q Consensus 281 ~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 360 (478)
.... .....+.+|||.||+||++.. .+|++++|||||||++|||+.-++||.+++-.+...+|...-.+|-+.
T Consensus 178 l~s~-~tfA~S~VGTPyYMSPE~i~~-~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~----- 250 (375)
T KOG0591|consen 178 LSSK-TTFAHSLVGTPYYMSPERIHE-SGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPD----- 250 (375)
T ss_pred hcch-hHHHHhhcCCCcccCHHHHhc-CCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcH-----
Confidence 7653 345567899999999999987 789999999999999999999999999998888888876542221110
Q ss_pred CCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCH
Q 011763 361 KLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATA 407 (478)
Q Consensus 361 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta 407 (478)
..++.++..||..|+.+||++||+.
T Consensus 251 ----------------------~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 251 ----------------------EHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred ----------------------HHhhhHHHHHHHHHccCCcccCCCc
Confidence 2467889999999999999999984
No 31
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-50 Score=366.96 Aligned_cols=263 Identities=31% Similarity=0.441 Sum_probs=229.1
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC------ChHHHHHHHHHHHHHHhc-CCCCeeeecceeeec
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF------EPESVRFMAREILILRRL-DHPNIIKLEGLITSR 201 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~------~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 201 (478)
.+.|+-.+.||.|..++|-+|.++.+++.+|+|++..... ..+..+...+|+.||+++ .||+|+++.++|+.
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes- 94 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES- 94 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC-
Confidence 3478889999999999999999999999999999965321 123344556799999998 79999999999987
Q ss_pred CCceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeeccccccc
Q 011763 202 LSCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFS 281 (478)
Q Consensus 202 ~~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~ 281 (478)
...+++|+|.|+.+.+.+++.....+++...+.|++||+.|+.|||.++||||||||+|||++++.++||+|||+++..
T Consensus 95 -~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l 173 (411)
T KOG0599|consen 95 -DAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQL 173 (411)
T ss_pred -cchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeecc
Confidence 6789999999998877777777778999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCCccccccCCcccCccccc-----CCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchh
Q 011763 282 NTGHRQPLTSRVVTLWYRPPELLL-----GATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDY 356 (478)
Q Consensus 282 ~~~~~~~~~~~~~t~~y~APE~l~-----~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~ 356 (478)
..+ ..+...||||+|+|||.+. +...|+..+|+|++|||||.|+.|.+||......-.+..|++.-.......
T Consensus 174 ~~G--ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~spe 251 (411)
T KOG0599|consen 174 EPG--EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPE 251 (411)
T ss_pred CCc--hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcc
Confidence 766 4457789999999999974 345689999999999999999999999998888888888877554444333
Q ss_pred hccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCC
Q 011763 357 WKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKP 420 (478)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~ 420 (478)
|.+++.+.+|||.+||++||++|+|++|+|.||||....
T Consensus 252 -------------------------Wadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~ 290 (411)
T KOG0599|consen 252 -------------------------WADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIA 290 (411)
T ss_pred -------------------------hhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHH
Confidence 358899999999999999999999999999999997543
No 32
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-49 Score=396.34 Aligned_cols=257 Identities=29% Similarity=0.516 Sum_probs=224.1
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
...|....+||+|+.|.||.++...+++.||||.+.+... ...+.+.+|+.+|+.++|+|||++++.|.. .+.+|+
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q--~~keLilnEi~Vm~~~~H~NiVnfl~Sylv--~deLWV 347 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQ--PKKELLLNEILVMRDLHHPNIVNFLDSYLV--GDELWV 347 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccC--CchhhhHHHHHHHHhccchHHHHHHHHhcc--cceeEE
Confidence 3468899999999999999999999999999999987653 334667899999999999999999998877 577999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
|||||+|+.+.++.... .++|.++..++++++.||+|||.+||+|||||.+|||++.+|.+||+|||+|..+..... .
T Consensus 348 VMEym~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-K 425 (550)
T KOG0578|consen 348 VMEYMEGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-K 425 (550)
T ss_pred EEeecCCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccC-c
Confidence 99999998777665443 599999999999999999999999999999999999999999999999999987765432 4
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF 368 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 368 (478)
..+.+|||.|||||++.. ..|++++||||||+|++||+-|+|||-..+....+..|.. .|.|....
T Consensus 426 R~TmVGTPYWMAPEVvtr-k~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~-ng~P~lk~------------ 491 (550)
T KOG0578|consen 426 RSTMVGTPYWMAPEVVTR-KPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPKLKN------------ 491 (550)
T ss_pred cccccCCCCccchhhhhh-cccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhh-cCCCCcCC------------
Confidence 467899999999999986 8899999999999999999999999998777776666543 44443222
Q ss_pred CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 369 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 369 ~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
...+++.+++||.+||+.||.+|++|.|+|+||||+.
T Consensus 492 -------------~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 492 -------------PEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKM 528 (550)
T ss_pred -------------ccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence 2478999999999999999999999999999999943
No 33
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=3.8e-50 Score=371.43 Aligned_cols=293 Identities=38% Similarity=0.684 Sum_probs=237.9
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCC----cEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCc
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTG----KIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSC 204 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~----~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 204 (478)
...|+.+.+||+|.||.||+|....++ +.+|||+++.+..........-+|+.+++.++||||+.|..+|... ..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~-d~ 101 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH-DK 101 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc-Cc
Confidence 457999999999999999999654443 3789999976532212222345799999999999999999998765 66
Q ss_pred eEEEEEeeccCCchhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecC----CcEEEeecc
Q 011763 205 SIYLVFEYMEHDITGLLSC----PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE----GVLKLADFG 276 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~~----~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~----~~vkl~DFG 276 (478)
.++|++||.+++|+..+.. ....++...++.|+.||+.|+.|||++-|+||||||.||||..+ |.|||+|||
T Consensus 102 ~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlG 181 (438)
T KOG0666|consen 102 KVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLG 181 (438)
T ss_pred eEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeeccc
Confidence 7999999999999887643 23469999999999999999999999999999999999999988 899999999
Q ss_pred cccccCCCCCC--CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC---------hHHHHHHH
Q 011763 277 LANFSNTGHRQ--PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRT---------EVEQLHKI 345 (478)
Q Consensus 277 ~a~~~~~~~~~--~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~---------~~~~~~~i 345 (478)
+++.+...-.. ....++.|.||+|||.++|...|+.++|||++|||+.||++-.|.|.+.. ..+++.+|
T Consensus 182 laR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rI 261 (438)
T KOG0666|consen 182 LARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRI 261 (438)
T ss_pred HHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHH
Confidence 99987643221 23446779999999999999999999999999999999999999998753 45789999
Q ss_pred HHHcCCCCchhhccCC-CCCc-cccC--CCCCCCcc-chhcc---cCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccC
Q 011763 346 FKLCGSPPDDYWKKSK-LPHA-TLFK--PQQPYDSS-LRETF---KDLPTTAVNLIETLLSVEPYKRATASAALASEYFS 417 (478)
Q Consensus 346 ~~~~g~~~~~~~~~~~-~~~~-~~~~--~~~~~~~~-l~~~~---~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~ 417 (478)
++.+|.|.+..|+..+ +|+. .... ....++.. |...+ +.-++...+||.+||++||.+|+|++++|+|+||.
T Consensus 262 f~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~ 341 (438)
T KOG0666|consen 262 FEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFT 341 (438)
T ss_pred HHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccc
Confidence 9999999999998753 4543 1111 11123322 33332 44566699999999999999999999999999999
Q ss_pred CCCCC
Q 011763 418 TKPYA 422 (478)
Q Consensus 418 ~~~~~ 422 (478)
+.+.+
T Consensus 342 ~d~lp 346 (438)
T KOG0666|consen 342 EDPLP 346 (438)
T ss_pred cCCCC
Confidence 98665
No 34
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.6e-48 Score=384.10 Aligned_cols=288 Identities=37% Similarity=0.682 Sum_probs=238.0
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|.+++.||+|+||+||++++..+++.||+|+++..... .....+.+|+.++++++||||+++++++.. ....|+
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~l 81 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIVHT--DKSLTL 81 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC-CcchhHHHHHHHHHhCCCCCcceEEEEEee--CCeEEE
Confidence 56899999999999999999999999999999999765422 223456689999999999999999999987 667999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||||+++++...+......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ..
T Consensus 82 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~ 160 (309)
T cd07872 82 VFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT-KT 160 (309)
T ss_pred EEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCc-cc
Confidence 99999998877776666678999999999999999999999999999999999999999999999999987543322 12
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccc-
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATL- 367 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~- 367 (478)
.....+|+.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+...++.++...|..........
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07872 161 YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKN 240 (309)
T ss_pred cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhh
Confidence 2334668999999998765678999999999999999999999999999999999999999999988886643221100
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCC
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKP 420 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~ 420 (478)
..........+....+.+++++++||.+||+.||.+|||+.|+|+||||+..+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 241 YNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred hhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 00000111122334457899999999999999999999999999999998643
No 35
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-48 Score=379.46 Aligned_cols=312 Identities=25% Similarity=0.416 Sum_probs=254.0
Q ss_pred CCCCCCCCccccccCCcccccchhhhhcCcchhhhhcccccccCcccccccceeeeeeeeecCceEEEEEEECCCCcEEE
Q 011763 80 GRASSNSESLSFRLGNLHKYIEGEQVAAGWPAWLSAVAGEAIQGWVPLRADAFEKLEKIGQGTYSSVFRARDLDTGKIVA 159 (478)
Q Consensus 80 ~~~ss~~~s~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vA 159 (478)
+..........|+.|+||++..|+.+..+ +|.+.++||+|.|+|||+|+|..+.+.||
T Consensus 50 ~~~~eqE~~~dY~kGGYHpV~IGD~F~~g----------------------RY~v~rKLGWGHFSTVWLawDtq~~r~VA 107 (590)
T KOG1290|consen 50 SDDEEQEDPEDYRKGGYHPVRIGDVFNGG----------------------RYHVQRKLGWGHFSTVWLAWDTQNKRYVA 107 (590)
T ss_pred CCcccccChhhhhcCCCceeeccccccCc----------------------eEEEEEeccccccceeEEEeeccCCeEEE
Confidence 33344577789999999999999999854 89999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHHHHHHHHHHHhcC-----C---CCeeeecceeee--cCCceEEEEEeeccCCchhhccCCC-CCC
Q 011763 160 LKKVRFDNFEPESVRFMAREILILRRLD-----H---PNIIKLEGLITS--RLSCSIYLVFEYMEHDITGLLSCPD-IKF 228 (478)
Q Consensus 160 lK~~~~~~~~~~~~~~~~~E~~~l~~l~-----h---~nIv~l~~~~~~--~~~~~~~lv~e~~~~~ll~~~~~~~-~~l 228 (478)
+|+++-. +...+....||++|++++ | .+||+|++.|.. .++.++|||+|+++.+||.++...+ ..+
T Consensus 108 lKVvKSA---qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGl 184 (590)
T KOG1290|consen 108 LKVVKSA---QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGL 184 (590)
T ss_pred EEEEehh---hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCC
Confidence 9999743 344566678999999982 2 479999999964 4567999999999999999887644 458
Q ss_pred CHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCcEEEec-----------------------------------------
Q 011763 229 SEAQIKCYMNQLLHGLEHCHSR-GVLHRDIKGSNLLVNN----------------------------------------- 266 (478)
Q Consensus 229 ~~~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~----------------------------------------- 266 (478)
+...++.|++|||.||+|||.. ||||.||||+||||..
T Consensus 185 pl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~ 264 (590)
T KOG1290|consen 185 PLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEP 264 (590)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccc
Confidence 9999999999999999999965 9999999999999910
Q ss_pred -------------------------------------------------------------------------C------
Q 011763 267 -------------------------------------------------------------------------E------ 267 (478)
Q Consensus 267 -------------------------------------------------------------------------~------ 267 (478)
.
T Consensus 265 ~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~ 344 (590)
T KOG1290|consen 265 MSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRG 344 (590)
T ss_pred cchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCccccchhhcccccccccccCCccccccCcccccc
Confidence 0
Q ss_pred ----------------------------------------------CcEEEeecccccccCCCCCCCccccccCCcccCc
Q 011763 268 ----------------------------------------------GVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPP 301 (478)
Q Consensus 268 ----------------------------------------------~~vkl~DFG~a~~~~~~~~~~~~~~~~t~~y~AP 301 (478)
-++||+|||.|++.. ...+..+.|..|+||
T Consensus 345 ~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~vKIaDlGNACW~~----khFT~DIQTRQYRap 420 (590)
T KOG1290|consen 345 NNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIRVKIADLGNACWVH----KHFTEDIQTRQYRAP 420 (590)
T ss_pred ccccccchhcccccccccccccCcCCccccccccccCCCCCCCccceeEEEeeccchhhhh----hhhchhhhhhhccCc
Confidence 037899999998865 345667889999999
Q ss_pred ccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHHHHcCCCCchhhccCCCC-----------C
Q 011763 302 ELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGR------TEVEQLHKIFKLCGSPPDDYWKKSKLP-----------H 364 (478)
Q Consensus 302 E~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~------~~~~~~~~i~~~~g~~~~~~~~~~~~~-----------~ 364 (478)
|++.+ ..|++.+||||++||+|||+||..+|... .+.+.++.|++++|..|..+....+.. +
T Consensus 421 EVllG-sgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~Lrh 499 (590)
T KOG1290|consen 421 EVLLG-SGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRH 499 (590)
T ss_pred ceeec-CCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceec
Confidence 99998 67999999999999999999999999643 367899999999999997765443321 1
Q ss_pred ccccCCCCCCCccchhccc---CCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCCC
Q 011763 365 ATLFKPQQPYDSSLRETFK---DLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYA 422 (478)
Q Consensus 365 ~~~~~~~~~~~~~l~~~~~---~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~~ 422 (478)
....+ .+++...|.+.+. .-..++.+||.-||+.+|++|+||.++|+|||++..+.+
T Consensus 500 I~~LK-~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~~~~ 559 (590)
T KOG1290|consen 500 IRRLK-PWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPVAGP 559 (590)
T ss_pred ccccC-CCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCccccCCCCC
Confidence 11111 2233344555443 234568899999999999999999999999999987665
No 36
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.6e-48 Score=388.52 Aligned_cols=290 Identities=34% Similarity=0.563 Sum_probs=231.9
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecC---CceEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRL---SCSIY 207 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~---~~~~~ 207 (478)
+|++.+.||+|+||.||+|++..+++.||||++............+.+|+.+|+.++||||+++++++.... ...+|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 589999999999999999999999999999998754333344556788999999999999999999885432 23589
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC--
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH-- 285 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~-- 285 (478)
+||||+++++...+. ....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 81 lv~e~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 159 (338)
T cd07859 81 VVFELMESDLHQVIK-ANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 159 (338)
T ss_pred EEEecCCCCHHHHHH-hcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCc
Confidence 999999877666554 34468999999999999999999999999999999999999999999999999997543211
Q ss_pred CCCccccccCCcccCcccccCC-CCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 286 RQPLTSRVVTLWYRPPELLLGA-TDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 286 ~~~~~~~~~t~~y~APE~l~~~-~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
........+|+.|+|||++.+. ..++.++|||||||++|+|++|++||.+.+....+..+...++.++...+.......
T Consensus 160 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 239 (338)
T cd07859 160 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEK 239 (338)
T ss_pred cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhh
Confidence 1122345789999999987642 468899999999999999999999999999888888888888888876654432111
Q ss_pred ccc-c-CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCC
Q 011763 365 ATL-F-KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPY 421 (478)
Q Consensus 365 ~~~-~-~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~ 421 (478)
... . .........+...++.+++.+.+||.+||..||++|||+.++|+||||+....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 240 ARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred HHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence 000 0 00001112233445678899999999999999999999999999999987544
No 37
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.6e-47 Score=399.65 Aligned_cols=283 Identities=23% Similarity=0.321 Sum_probs=219.8
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCC------CCeeeecceeeecC
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDH------PNIIKLEGLITSRL 202 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~nIv~l~~~~~~~~ 202 (478)
.++|+++++||+|+||+||+|++..+++.||||+++... ........|+.+++.+.| .+|++++++|...
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~- 203 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE- 203 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC-
Confidence 578999999999999999999999999999999996422 223344567777777754 4588898888754
Q ss_pred CceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCcEEEecCC-------------
Q 011763 203 SCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEG------------- 268 (478)
Q Consensus 203 ~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~------------- 268 (478)
..++|||||++.+.++..+... ..+++..++.++.||+.||+|||+ .|||||||||+||||+.++
T Consensus 204 ~~~~~iv~~~~g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~ 282 (467)
T PTZ00284 204 TGHMCIVMPKYGPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPP 282 (467)
T ss_pred CceEEEEEeccCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCC
Confidence 4578999999988777766543 479999999999999999999997 5999999999999998765
Q ss_pred ---cEEEeecccccccCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 011763 269 ---VLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKI 345 (478)
Q Consensus 269 ---~vkl~DFG~a~~~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i 345 (478)
.+||+|||++..... .....++|+.|+|||++.+ ..|+.++|||||||+||||++|++||.+.+..+.+..+
T Consensus 283 ~~~~vkl~DfG~~~~~~~----~~~~~~gt~~Y~APE~~~~-~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i 357 (467)
T PTZ00284 283 DPCRVRICDLGGCCDERH----SRTAIVSTRHYRSPEVVLG-LGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLM 357 (467)
T ss_pred CCceEEECCCCccccCcc----ccccccCCccccCcHHhhc-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 499999998864322 2245678999999999987 67899999999999999999999999999999999999
Q ss_pred HHHcCCCCchhhccCCCCCcc-ccCCC----CCCCc-cchhc-----c--cCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 346 FKLCGSPPDDYWKKSKLPHAT-LFKPQ----QPYDS-SLRET-----F--KDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 346 ~~~~g~~~~~~~~~~~~~~~~-~~~~~----~~~~~-~l~~~-----~--~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
...++.+|..++......... .+... ..... .+... + ....+.+.|||.+||++||.+|||+.|+|+
T Consensus 358 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 358 EKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred HHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 999999887765432211110 00000 00000 00000 0 012456889999999999999999999999
Q ss_pred CcccCCCCC
Q 011763 413 SEYFSTKPY 421 (478)
Q Consensus 413 hp~f~~~~~ 421 (478)
||||.....
T Consensus 438 Hp~~~~~~~ 446 (467)
T PTZ00284 438 HPYVLKYYP 446 (467)
T ss_pred CccccccCC
Confidence 999987433
No 38
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=5.7e-48 Score=377.69 Aligned_cols=280 Identities=41% Similarity=0.697 Sum_probs=225.6
Q ss_pred ceeeeeeeeecCceEEEEEEECC-CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc---CCCCeeeecceeee---cCC
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLD-TGKIVALKKVRFDNFEPESVRFMAREILILRRL---DHPNIIKLEGLITS---RLS 203 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~-~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~---~~~ 203 (478)
+|++++.||+|+||+||+|++.. +++.||+|+++...........+.+|+.+++.+ +||||+++++++.. ...
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 79999999999999999999854 468899999876543333334455677777766 69999999998852 224
Q ss_pred ceEEEEEeeccCCchhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccC
Q 011763 204 CSIYLVFEYMEHDITGLLSCP-DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSN 282 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~ 282 (478)
..+++||||+++++...+... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 82 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T cd07862 82 TKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS 161 (290)
T ss_pred CcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEecc
Confidence 568999999998776666442 3458999999999999999999999999999999999999999999999999997654
Q ss_pred CCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCC-
Q 011763 283 TGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK- 361 (478)
Q Consensus 283 ~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~- 361 (478)
.. .......+|+.|+|||++.+ ..++.++|||||||++|||++|++||.+.+..+.+..+....+.+.+..|....
T Consensus 162 ~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 238 (290)
T cd07862 162 FQ--MALTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 238 (290)
T ss_pred CC--cccccccccccccChHHHhC-CCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhc
Confidence 32 22344567999999999876 678999999999999999999999999999999999999988888766664421
Q ss_pred CCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 362 LPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 362 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
++... +.. .....+....+.+++.+.+||.+||+.||++|||+.++|+||||
T Consensus 239 ~~~~~-~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 239 LPRQA-FHS--KSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred ccchh-ccC--CCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 11111 111 11122334446788999999999999999999999999999998
No 39
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=4.6e-48 Score=400.03 Aligned_cols=284 Identities=33% Similarity=0.566 Sum_probs=227.6
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeec------C
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSR------L 202 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~ 202 (478)
..+|++.+.||+|+||.||+|.+..+++.||||++..+. ....+|+.+|+.++|||||++++++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~ 138 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK 138 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence 457999999999999999999999999999999986432 2234699999999999999998877431 1
Q ss_pred CceEEEEEeeccCCchhhcc---CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCC-cEEEeecccc
Q 011763 203 SCSIYLVFEYMEHDITGLLS---CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG-VLKLADFGLA 278 (478)
Q Consensus 203 ~~~~~lv~e~~~~~ll~~~~---~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~-~vkl~DFG~a 278 (478)
...+++||||+++++...+. .....+++..++.++.||+.||.|||+++|+||||||+||||+.++ .+||+|||+|
T Consensus 139 ~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla 218 (440)
T PTZ00036 139 NIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSA 218 (440)
T ss_pred ceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccc
Confidence 23578999999987655442 3456799999999999999999999999999999999999999665 7999999999
Q ss_pred cccCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhc
Q 011763 279 NFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWK 358 (478)
Q Consensus 279 ~~~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~ 358 (478)
+...... ......+|+.|+|||++.+...|+.++|||||||+||||++|.+||.+.+..+.+.++...++.|+.+.+.
T Consensus 219 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~ 296 (440)
T PTZ00036 219 KNLLAGQ--RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLK 296 (440)
T ss_pred hhccCCC--CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 8654322 22345779999999998876679999999999999999999999999999999999999999998876654
Q ss_pred cCCCCCccccCCCCCCCccchhccc-CCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCC
Q 011763 359 KSKLPHATLFKPQQPYDSSLRETFK-DLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPY 421 (478)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~ 421 (478)
...........+ ......+...++ ..++++++||.+||.+||.+|||+.|+|.||||.....
T Consensus 297 ~~~~~~~~~~~~-~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 297 EMNPNYADIKFP-DVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRD 359 (440)
T ss_pred HhchhhhcccCC-ccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhc
Confidence 322111111111 111122333333 57889999999999999999999999999999986543
No 40
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=8.2e-48 Score=388.65 Aligned_cols=288 Identities=31% Similarity=0.527 Sum_probs=230.3
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecC----Cc
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRL----SC 204 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----~~ 204 (478)
.++|++++.||+|+||.||++++..+++.||+|++............+.+|+.+++.++||||+++++++.... ..
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 46899999999999999999999999999999999765545555667788999999999999999999886432 13
Q ss_pred eEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 205 SIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
.+|+||||+++++...+.. .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 100 ~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~ 176 (359)
T cd07876 100 DVYLVMELMDANLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN 176 (359)
T ss_pred eeEEEEeCCCcCHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccC
Confidence 5799999999887766532 4789999999999999999999999999999999999999999999999999754322
Q ss_pred CCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 285 HRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 285 ~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
.......+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+...++.++..+++......
T Consensus 177 --~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (359)
T cd07876 177 --FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTV 253 (359)
T ss_pred --ccCCCCcccCCCCCchhccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 22244577999999999976 678999999999999999999999999999888999999988888776554321100
Q ss_pred ccc-----cCCCCCCC--------ccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCCC
Q 011763 365 ATL-----FKPQQPYD--------SSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYA 422 (478)
Q Consensus 365 ~~~-----~~~~~~~~--------~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~~ 422 (478)
... ..+...+. ..........++.+++||.+||..||++|||+.|+|+||||..+..+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~ 324 (359)
T cd07876 254 RNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDP 324 (359)
T ss_pred HHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhcCc
Confidence 000 00000000 00011112356789999999999999999999999999999865443
No 41
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3e-48 Score=393.70 Aligned_cols=288 Identities=34% Similarity=0.534 Sum_probs=232.4
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecC---CceEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRL---SCSIY 207 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~---~~~~~ 207 (478)
+|++++.||+|+||.||++.+..+++.||||++..........+.+.+|+.+|+.++|+||+++++++.... ...+|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 488999999999999999999999999999998754434455567889999999999999999999987632 12689
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
+||||+.+++...+.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 81 lv~e~~~~~l~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~ 159 (372)
T cd07853 81 VVTELMQSDLHKIIVS-PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK 159 (372)
T ss_pred EEeeccccCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccc
Confidence 9999999877665543 447999999999999999999999999999999999999999999999999999765443333
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc-c
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA-T 366 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~-~ 366 (478)
......+|+.|+|||++.+...++.++|||||||++|||++|++||.+.+..+++..+.+.+|.++...+........ .
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 239 (372)
T cd07853 160 HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAH 239 (372)
T ss_pred cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHH
Confidence 334456789999999998766789999999999999999999999999999999999999999888655432110000 0
Q ss_pred cc-CC-CCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 367 LF-KP-QQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 367 ~~-~~-~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
.. .+ ..+....+.......++++.+||.+||+.||.+|||+.|+|+||||...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 240 ILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG 294 (372)
T ss_pred HHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence 00 00 0000111112234568899999999999999999999999999999874
No 42
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-49 Score=378.59 Aligned_cols=261 Identities=31% Similarity=0.466 Sum_probs=212.4
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
.++...+.||+|+||+||++.+..+|..+|||.+..... ...+.+.+|+.+|.+|+|||||++++.........++++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~--~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~ 94 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS--PTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIF 94 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccc--hhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEee
Confidence 368889999999999999999999999999999986632 226678899999999999999999997544322468999
Q ss_pred EeeccCCchhhccCCCC-CCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEec-CCcEEEeecccccccCC--CC
Q 011763 210 FEYMEHDITGLLSCPDI-KFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNN-EGVLKLADFGLANFSNT--GH 285 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~-~~~vkl~DFG~a~~~~~--~~ 285 (478)
|||+.++.+..+....+ .|++..++.+.+||++||.|||++||||+||||+||||+. ++.+||+|||+++.... ..
T Consensus 95 mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~ 174 (313)
T KOG0198|consen 95 MEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTK 174 (313)
T ss_pred eeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccccc
Confidence 99999877776665544 7999999999999999999999999999999999999999 79999999999976653 12
Q ss_pred CCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 286 RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGR-TEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 286 ~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~-~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
........||+.|||||++........++|||||||++.||+||.+||... ...+.+..+......|
T Consensus 175 ~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P------------ 242 (313)
T KOG0198|consen 175 SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLP------------ 242 (313)
T ss_pred ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCC------------
Confidence 223345788999999999985233345999999999999999999999873 3333333332211000
Q ss_pred ccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 365 ATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 365 ~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
.....+++++++||.+||..||.+||||.++|+|||.+..
T Consensus 243 ---------------~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 243 ---------------EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQN 282 (313)
T ss_pred ---------------CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence 1124689999999999999999999999999999999763
No 43
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-48 Score=374.80 Aligned_cols=271 Identities=27% Similarity=0.432 Sum_probs=223.5
Q ss_pred ccccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceE
Q 011763 127 LRADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSI 206 (478)
Q Consensus 127 ~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 206 (478)
+..+.|++...||.|..++||+|+...++.+||||+++.+..+.+ .+.+.+|+..|+.++||||++++..|.. +..+
T Consensus 23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv--~~~L 99 (516)
T KOG0582|consen 23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVV--DSEL 99 (516)
T ss_pred CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEe--ccee
Confidence 336789999999999999999999999999999999998876544 7889999999999999999999999988 6789
Q ss_pred EEEEeeccCCchhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCC-
Q 011763 207 YLVFEYMEHDITGLLSCP--DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNT- 283 (478)
Q Consensus 207 ~lv~e~~~~~ll~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~- 283 (478)
|+||.||.++.+..+... ...+.|..+..|++++++||.|||++|.||||||+.||||+.+|.|||+|||.+.....
T Consensus 100 WvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 100 WVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred EEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence 999999998766555432 22489999999999999999999999999999999999999999999999998754432
Q ss_pred CCCC--CccccccCCcccCccccc-CCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccC
Q 011763 284 GHRQ--PLTSRVVTLWYRPPELLL-GATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKS 360 (478)
Q Consensus 284 ~~~~--~~~~~~~t~~y~APE~l~-~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 360 (478)
+.+. .....++|++|||||+++ .-..|+.|+||||||++..||.+|..||........+..- +.+.||.-.
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~t--Lqn~pp~~~---- 253 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLT--LQNDPPTLL---- 253 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHH--hcCCCCCcc----
Confidence 2211 124568899999999954 4467999999999999999999999999988877766443 333443111
Q ss_pred CCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 361 KLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 361 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
....-.+..+.++..++.+|..||..||++||||+++|+|+||+..
T Consensus 254 -------------t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~ 299 (516)
T KOG0582|consen 254 -------------TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKA 299 (516)
T ss_pred -------------cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhc
Confidence 0000112234567799999999999999999999999999999864
No 44
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.4e-48 Score=392.57 Aligned_cols=284 Identities=26% Similarity=0.390 Sum_probs=221.6
Q ss_pred ccccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceE
Q 011763 127 LRADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSI 206 (478)
Q Consensus 127 ~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 206 (478)
+...+|++++.||+|+||.||+|++..+++.||+|+... ..+.+|+.+|+.|+||||++++++|.. ....
T Consensus 89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~--~~~~ 158 (391)
T PHA03212 89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTY--NKFT 158 (391)
T ss_pred cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEE--CCee
Confidence 335689999999999999999999999999999997532 235689999999999999999999987 6779
Q ss_pred EEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 207 YLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 207 ~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
|+|||++.+++...+.. ...+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++........
T Consensus 159 ~lv~e~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~ 237 (391)
T PHA03212 159 CLILPRYKTDLYCYLAA-KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA 237 (391)
T ss_pred EEEEecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccc
Confidence 99999998776665544 34689999999999999999999999999999999999999999999999999975433222
Q ss_pred CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC-------ChHHHHHHHHHHcCCCCchhhcc
Q 011763 287 QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGR-------TEVEQLHKIFKLCGSPPDDYWKK 359 (478)
Q Consensus 287 ~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~-------~~~~~~~~i~~~~g~~~~~~~~~ 359 (478)
.......+|+.|+|||++.+ ..++.++|||||||++|||++|..||... ....++..++..+|.+|.++...
T Consensus 238 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~ 316 (391)
T PHA03212 238 NKYYGWAGTIATNAPELLAR-DPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316 (391)
T ss_pred cccccccCccCCCChhhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence 33345678999999999876 67899999999999999999999776543 23467778888888776544211
Q ss_pred CCCCCcccc------CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCCC
Q 011763 360 SKLPHATLF------KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYA 422 (478)
Q Consensus 360 ~~~~~~~~~------~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~~ 422 (478)
........+ ....+...........++.++.+||.+||++||.+|||+.|+|+||||+..+.+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~ 385 (391)
T PHA03212 317 AQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDP 385 (391)
T ss_pred hhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCC
Confidence 000000000 000000111111123467789999999999999999999999999999875544
No 45
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.2e-47 Score=386.19 Aligned_cols=288 Identities=29% Similarity=0.505 Sum_probs=231.3
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecC----Cc
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRL----SC 204 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----~~ 204 (478)
.++|++.+.||+|+||.||++.+..+++.||||++............+.+|+.+++.++||||+++++++.... ..
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 46899999999999999999999999999999999765544555667788999999999999999999875421 24
Q ss_pred eEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 205 SIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
.+|+||||+++++...+.. .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 103 ~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 179 (364)
T cd07875 103 DVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179 (364)
T ss_pred eEEEEEeCCCCCHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCC
Confidence 5799999999887766532 4789999999999999999999999999999999999999999999999999765432
Q ss_pred CCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 285 HRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 285 ~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
.......+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+.++...++.+..++++......
T Consensus 180 --~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (364)
T cd07875 180 --FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 256 (364)
T ss_pred --CcccCCcccCCcCCHHHHhC-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHH
Confidence 22234577999999999876 678999999999999999999999999999999999999999988877655432110
Q ss_pred ccccCCCC---------CCC----ccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCCC
Q 011763 365 ATLFKPQQ---------PYD----SSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYA 422 (478)
Q Consensus 365 ~~~~~~~~---------~~~----~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~~ 422 (478)
........ ... ..........+..+++||.+||..||.+|||+.|+|+||||..+..+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~~ 327 (364)
T cd07875 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 327 (364)
T ss_pred HHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccccCc
Confidence 00000000 000 00011112345678999999999999999999999999999865433
No 46
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.8e-47 Score=375.21 Aligned_cols=286 Identities=38% Similarity=0.692 Sum_probs=235.8
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|++++.||.|+||.||++.+..+++.||+|.+...... .....+.+|+.+++.++||||+++++++.. ....|+
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~--~~~~~l 81 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHT--EKSLTL 81 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEec--CCeEEE
Confidence 67899999999999999999999999999999999755422 223456689999999999999999999987 677999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||||+.+++...+......+++..++.++.||+.||.|||+++|+|+||||+|||++.++.++|+|||++....... ..
T Consensus 82 v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-~~ 160 (301)
T cd07873 82 VFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-KT 160 (301)
T ss_pred EEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC-Cc
Confidence 99999988877776666678999999999999999999999999999999999999999999999999987543322 12
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC-ccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH-ATL 367 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~-~~~ 367 (478)
.....+++.|+|||++.+...++.++|||||||++|+|++|++||...+..+.+..+...++.+....|+...... ...
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (301)
T cd07873 161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKS 240 (301)
T ss_pred ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccc
Confidence 2334568899999998775678899999999999999999999999999989999999999998888876532111 000
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
..........+......+++.+.+||.+||+.||.+|||+.|+|+||||..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~ 291 (301)
T cd07873 241 YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHC 291 (301)
T ss_pred cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 111111122233344578899999999999999999999999999999975
No 47
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-47 Score=384.02 Aligned_cols=264 Identities=34% Similarity=0.499 Sum_probs=229.3
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCC-hHHHHHHHHHHHHHHhcC-CCCeeeecceeeecCCceE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFE-PESVRFMAREILILRRLD-HPNIIKLEGLITSRLSCSI 206 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~-~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~ 206 (478)
.+.|++.+.||.|.||.||+|+++.+|+.+|+|++.+.... ....+.+.+|+.||+++. |||||.++++|+. ...+
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~--~~~~ 111 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFED--PDSV 111 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEc--CCeE
Confidence 45799999999999999999999999999999999876543 334577889999999998 9999999999988 5689
Q ss_pred EEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecC----CcEEEeecccccccC
Q 011763 207 YLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE----GVLKLADFGLANFSN 282 (478)
Q Consensus 207 ~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~----~~vkl~DFG~a~~~~ 282 (478)
++|||++.|+.+....... .+++..+..++.||+.++.|||+.||+||||||+|+|+... +.+|++|||++....
T Consensus 112 ~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~ 190 (382)
T KOG0032|consen 112 YLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK 190 (382)
T ss_pred EEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence 9999999986554443333 49999999999999999999999999999999999999654 479999999998877
Q ss_pred CCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCC
Q 011763 283 TGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL 362 (478)
Q Consensus 283 ~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 362 (478)
. .......+||+.|+|||++.. ..|+..+||||+||++|.|++|.+||.+.+..+...+|...-...+...
T Consensus 191 ~--~~~~~~~~Gtp~y~APEvl~~-~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~------ 261 (382)
T KOG0032|consen 191 P--GERLHTIVGTPEYVAPEVLGG-RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEP------ 261 (382)
T ss_pred C--CceEeeecCCccccCchhhcC-CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCC------
Confidence 6 345677899999999999976 7899999999999999999999999999999988888776443333333
Q ss_pred CCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCCCC
Q 011763 363 PHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYAC 423 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~~~ 423 (478)
|+.++..+++||+.||..||.+|+|+.++|+|||++.....+
T Consensus 262 -------------------w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~~~~ 303 (382)
T KOG0032|consen 262 -------------------WDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIGEAT 303 (382)
T ss_pred -------------------ccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCcccc
Confidence 468899999999999999999999999999999998754443
No 48
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=7.6e-48 Score=377.59 Aligned_cols=256 Identities=25% Similarity=0.366 Sum_probs=217.9
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
++|++.+.||+|+||.||+|.+..+++.||+|++..... .....+.+.+|+.+|+.++||||+++++++.+ ...+|+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~l 78 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHD--QRFLYM 78 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhcc--CCeEEE
Confidence 379999999999999999999999999999999975432 22345667889999999999999999998877 678999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||||+.++.+..+......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~---- 154 (291)
T cd05612 79 LMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR---- 154 (291)
T ss_pred EEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC----
Confidence 9999998766665555667999999999999999999999999999999999999999999999999999765432
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF 368 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 368 (478)
.....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+....+....-.
T Consensus 155 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~----------------- 216 (291)
T cd05612 155 TWTLCGTPEYLAPEVIQS-KGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLE----------------- 216 (291)
T ss_pred cccccCChhhcCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcC-----------------
Confidence 233568999999999876 66899999999999999999999999998877777666542100
Q ss_pred CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccC-----HHHHHhCcccCCCCC
Q 011763 369 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT-----ASAALASEYFSTKPY 421 (478)
Q Consensus 369 ~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t-----a~e~L~hp~f~~~~~ 421 (478)
....++..+++||++||+.||.+|++ +.++++||||+...+
T Consensus 217 ------------~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~ 262 (291)
T cd05612 217 ------------FPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDW 262 (291)
T ss_pred ------------CCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCH
Confidence 01245788999999999999999995 999999999987554
No 49
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.1e-49 Score=351.61 Aligned_cols=255 Identities=32% Similarity=0.480 Sum_probs=225.6
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCCh-HHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEP-ESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
.++|++.+.||+|.||.||+|+.+.++-.||+|++.+..+.. ....++.+|++|-..|+||||+++|++|.+ ...+|
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd--~~riy 98 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHD--SKRIY 98 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheec--cceeE
Confidence 789999999999999999999999999999999998765432 334567789999999999999999999998 67899
Q ss_pred EEEeeccCCchhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC
Q 011763 208 LVFEYMEHDITGLLSC--PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH 285 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~ 285 (478)
|++||...+.+...+. ...++++.....|++|++.||.|+|.++||||||||+|+|++..+.+||+|||.+...+..
T Consensus 99 LilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~- 177 (281)
T KOG0580|consen 99 LILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSN- 177 (281)
T ss_pred EEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCC-
Confidence 9999998765544444 6667999999999999999999999999999999999999999999999999999766533
Q ss_pred CCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 286 RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 286 ~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
...+.+||..|.+||+..+ ..++..+|+|++|++.||++.|.+||...+..+++++|.+.--..|
T Consensus 178 --kR~tlcgt~dyl~pEmv~~-~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p------------ 242 (281)
T KOG0580|consen 178 --KRKTLCGTLDYLPPEMVEG-RGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP------------ 242 (281)
T ss_pred --CceeeecccccCCHhhcCC-CCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC------------
Confidence 3366799999999999887 7789999999999999999999999999999999999876432222
Q ss_pred cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 366 TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
..++..+.|||.+||.++|.+|.+..|++.|||...
T Consensus 243 -----------------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 243 -----------------STISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred -----------------cccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 368899999999999999999999999999999865
No 50
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=8.1e-48 Score=384.08 Aligned_cols=257 Identities=25% Similarity=0.365 Sum_probs=218.8
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
.++|++.+.||+|+||.||+|++..+++.||+|++..... .......+.+|+.+|+.++||||+++++++.. ...+|
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~ 94 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQD--ENRVY 94 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc--CCEEE
Confidence 6789999999999999999999999999999999975432 23345667889999999999999999999987 67899
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
+||||+.++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++......
T Consensus 95 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--- 171 (329)
T PTZ00263 95 FLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR--- 171 (329)
T ss_pred EEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC---
Confidence 99999998766655555667899999999999999999999999999999999999999999999999999765432
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccc
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATL 367 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 367 (478)
.....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+....+.... ++
T Consensus 172 -~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~--~~-------------- 233 (329)
T PTZ00263 172 -TFTLCGTPEYLAPEVIQS-KGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGR--LK-------------- 233 (329)
T ss_pred -cceecCChhhcCHHHHcC-CCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCC--cC--------------
Confidence 123578999999999876 668999999999999999999999999888777666654311 10
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccC-----HHHHHhCcccCCCCC
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT-----ASAALASEYFSTKPY 421 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t-----a~e~L~hp~f~~~~~ 421 (478)
....++..+.+||.+||+.||.+|++ +.+++.||||....+
T Consensus 234 -------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~ 279 (329)
T PTZ00263 234 -------------FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANW 279 (329)
T ss_pred -------------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCH
Confidence 00236788999999999999999997 799999999987544
No 51
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=4.9e-47 Score=370.55 Aligned_cols=281 Identities=38% Similarity=0.678 Sum_probs=225.2
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc---CCCCeeeecceeeec---CCc
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL---DHPNIIKLEGLITSR---LSC 204 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~~---~~~ 204 (478)
+|++++.||+|+||+||+|++..+++.||+|+++...........+.+|+.+++.+ +||||+++++++... ...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 48999999999999999999999999999999876433222223345677776665 799999999987642 235
Q ss_pred eEEEEEeeccCCchhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCC
Q 011763 205 SIYLVFEYMEHDITGLLSCP-DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNT 283 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~ 283 (478)
.+++||||+.+++...+... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd07863 81 KVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSC 160 (288)
T ss_pred eEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccC
Confidence 68999999998776665443 33589999999999999999999999999999999999999999999999999976543
Q ss_pred CCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCC
Q 011763 284 GHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP 363 (478)
Q Consensus 284 ~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 363 (478)
. .......+|..|+|||++.+ ..++.++|||||||++|+|++|++||.+....+.+.++....+.+....|......
T Consensus 161 ~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07863 161 Q--MALTPVVVTLWYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTL 237 (288)
T ss_pred c--ccCCCccccccccCchHhhC-CCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccc
Confidence 2 22234567899999999876 66899999999999999999999999999999999999998888876666432111
Q ss_pred CccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 364 HATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 364 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
....+.+ .....+....+.++..+.+||.+||++||.+|||+.|+|.||||
T Consensus 238 ~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 238 PRGAFSP--RGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred cccccCC--CCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 1111111 11122344456788999999999999999999999999999998
No 52
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.1e-50 Score=359.95 Aligned_cols=294 Identities=43% Similarity=0.752 Sum_probs=243.3
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeec------C
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSR------L 202 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~ 202 (478)
...|+.+.+||+|.||.||+|+...+++.||+|++..++-....-....+|+.+|..|.|+|++.++++|... .
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 4579999999999999999999999999999998765443323334456899999999999999999887431 1
Q ss_pred CceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccC
Q 011763 203 SCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSN 282 (478)
Q Consensus 203 ~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~ 282 (478)
...+||||.+|++++...+......++...+..++.+++.||.|+|.+.|+|||+|++|+||+.+|.+||+|||+++.+.
T Consensus 96 r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs 175 (376)
T KOG0669|consen 96 RATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFS 175 (376)
T ss_pred cceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecccccccee
Confidence 33589999999999999998888899999999999999999999999999999999999999999999999999997553
Q ss_pred CCC---CCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhcc
Q 011763 283 TGH---RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKK 359 (478)
Q Consensus 283 ~~~---~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~ 359 (478)
... ....+.++.|.||++||.+.|...|+++.|||..||||.||+++.+.|.+.++..+++.|..++|....+.|+.
T Consensus 176 ~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~ 255 (376)
T KOG0669|consen 176 TSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPN 255 (376)
T ss_pred cccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCC
Confidence 221 23356778899999999999999999999999999999999999999999999999999999999999999976
Q ss_pred C-CCCCcccc--CCCC-CCCccchhcccC--CchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCCC
Q 011763 360 S-KLPHATLF--KPQQ-PYDSSLRETFKD--LPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYA 422 (478)
Q Consensus 360 ~-~~~~~~~~--~~~~-~~~~~l~~~~~~--~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~~ 422 (478)
. +++-.... .|.. .-.+.+....+. -++++.+||..||.+||.+|++++++|+|.||...|.+
T Consensus 256 ~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p 324 (376)
T KOG0669|consen 256 VDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMP 324 (376)
T ss_pred cccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence 3 23321111 1100 000111122221 25689999999999999999999999999999887765
No 53
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=6.6e-47 Score=368.88 Aligned_cols=283 Identities=40% Similarity=0.733 Sum_probs=230.9
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
+|++++.||.|+||.||+|++..+++.||+|++............+.+|+.+++.++||||+++++++.. +..+|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~ 78 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQ--ESRLYLIF 78 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEee--CCeEEEEE
Confidence 4899999999999999999999999999999997654444445667789999999999999999999987 67899999
Q ss_pred eeccCCchhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 211 EYMEHDITGLLSC--PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 211 e~~~~~ll~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||+++++...+.. ....+++..++.++.||+.||.|||+++|+|+||||+|||++.++.++|+|||++....... ..
T Consensus 79 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-~~ 157 (285)
T cd07861 79 EFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV-RV 157 (285)
T ss_pred ecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc-cc
Confidence 9999876665543 22568999999999999999999999999999999999999999999999999987554322 22
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF 368 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 368 (478)
.....+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+....+.+....|...........
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (285)
T cd07861 158 YTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKN 237 (285)
T ss_pred ccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHh
Confidence 23345688999999987656678999999999999999999999999999888888888888887777754321111000
Q ss_pred CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 369 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 369 ~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
.........+......+++++.+||.+||..||.+|||+.++|+||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 238 TFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 000111122333445689999999999999999999999999999998
No 54
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=4e-47 Score=370.44 Aligned_cols=283 Identities=41% Similarity=0.693 Sum_probs=232.0
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
+|++.+.||.|+||.||++++..+|+.||+|+++...........+.+|+.+++.++||||+++++++.+ ...+|+|+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 78 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHS--DKKLTLVF 78 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhcc--CCceEEEE
Confidence 4899999999999999999999999999999997654444444567789999999999999999999987 66799999
Q ss_pred eeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCcc
Q 011763 211 EYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLT 290 (478)
Q Consensus 211 e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~ 290 (478)
||++++++..+......+++..++.++.||+.||.|||+++|+|+||||+||+++.++.+||+|||++....... ....
T Consensus 79 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~ 157 (284)
T cd07839 79 EYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV-RCYS 157 (284)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC-CCcC
Confidence 999988877776656679999999999999999999999999999999999999999999999999997654322 2223
Q ss_pred ccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCC-CCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccC
Q 011763 291 SRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPI-LQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFK 369 (478)
Q Consensus 291 ~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~p-f~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 369 (478)
...+++.|+|||++.+...++.++|||||||++|+|++|..| |.+.+..+.+..+...++.++...|............
T Consensus 158 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07839 158 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPY 237 (284)
T ss_pred CCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccccccc
Confidence 446688999999987756689999999999999999998766 6667777888888888888887766543211111111
Q ss_pred CCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 370 PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 370 ~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
+..+....+.+..+.+++++.+||.+||..||.+|||+.++|.||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 238 PMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred CCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 11222222344456789999999999999999999999999999998
No 55
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3e-47 Score=385.08 Aligned_cols=265 Identities=27% Similarity=0.405 Sum_probs=217.0
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
++|++++.||+|+||+||+|++..+++.||||+++.... .......+.+|+.++..++|+||+++++.+.+ ...+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~--~~~~~l 78 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQD--KLNLYL 78 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEec--CCeEEE
Confidence 479999999999999999999999999999999975432 23344567789999999999999999999887 678999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC--
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-- 286 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~-- 286 (478)
||||++++.+..+......+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+++.......
T Consensus 79 v~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 79 IMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred EEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 999999877666665666899999999999999999999999999999999999999999999999999875432110
Q ss_pred --------------------------------CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCC
Q 011763 287 --------------------------------QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQ 334 (478)
Q Consensus 287 --------------------------------~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~ 334 (478)
......+||+.|+|||++.+ ..++.++|||||||++|||++|++||.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~~~DvwSlGvil~ell~G~~Pf~ 237 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcC-CCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence 01124578999999999886 678999999999999999999999999
Q ss_pred CCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCC---ccCHHHHH
Q 011763 335 GRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYK---RATASAAL 411 (478)
Q Consensus 335 ~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~---R~ta~e~L 411 (478)
+.+..+...++........ +. ....+++++++||.+|+. +|.+ ||+++|++
T Consensus 238 ~~~~~~~~~~i~~~~~~~~--------------------~p-----~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~ 291 (363)
T cd05628 238 SETPQETYKKVMNWKETLI--------------------FP-----PEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIK 291 (363)
T ss_pred CCCHHHHHHHHHcCcCccc--------------------CC-----CcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHh
Confidence 9888777777654211100 00 002467899999999876 5554 58999999
Q ss_pred hCcccCCCCCCC
Q 011763 412 ASEYFSTKPYAC 423 (478)
Q Consensus 412 ~hp~f~~~~~~~ 423 (478)
+||||+...|..
T Consensus 292 ~hp~f~~~~~~~ 303 (363)
T cd05628 292 TNPFFEGVDWEH 303 (363)
T ss_pred CCCCCCCCCHHH
Confidence 999998765543
No 56
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.6e-47 Score=380.95 Aligned_cols=253 Identities=25% Similarity=0.391 Sum_probs=212.7
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeecc
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYME 214 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~ 214 (478)
+.||+|+||.||++++..+++.||||++..... .......+.+|+.+|+.++||||+++++++.. ...+||||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~--~~~~~lv~e~~~ 78 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQT--HDRLCFVMEYAN 78 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEc--CCEEEEEEeCCC
Confidence 469999999999999999999999999976432 23445567789999999999999999998877 678999999999
Q ss_pred CCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCcccccc
Q 011763 215 HDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVV 294 (478)
Q Consensus 215 ~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~ 294 (478)
++.+.........+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+++...... ......++
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~-~~~~~~~g 157 (323)
T cd05571 79 GGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG-ATMKTFCG 157 (323)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC-Ccccceec
Confidence 87776666666689999999999999999999999999999999999999999999999999987532221 22334578
Q ss_pred CCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCC
Q 011763 295 TLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPY 374 (478)
Q Consensus 295 t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 374 (478)
|+.|+|||++.+ ..++.++|||||||++|||++|+.||...+.......+......
T Consensus 158 t~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~----------------------- 213 (323)
T cd05571 158 TPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR----------------------- 213 (323)
T ss_pred CccccChhhhcC-CCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCC-----------------------
Confidence 999999999876 67899999999999999999999999887766665554321100
Q ss_pred CccchhcccCCchhHHHHHHHhcCCCCCCcc-----CHHHHHhCcccCCCCC
Q 011763 375 DSSLRETFKDLPTTAVNLIETLLSVEPYKRA-----TASAALASEYFSTKPY 421 (478)
Q Consensus 375 ~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~-----ta~e~L~hp~f~~~~~ 421 (478)
....+++++.+||.+||+.||++|| ++.++|+||||....+
T Consensus 214 ------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~ 259 (323)
T cd05571 214 ------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINW 259 (323)
T ss_pred ------CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence 0135788999999999999999999 8999999999987554
No 57
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3e-48 Score=369.55 Aligned_cols=255 Identities=29% Similarity=0.473 Sum_probs=231.1
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
..+|++.+.||+|.||+|-+|.+...|+.||||.++++.+ +.+..-.+.+||+||..|+||||+.+|++|+. .+.+.
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFEN--kdKIv 129 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFEN--KDKIV 129 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcC--CceEE
Confidence 4589999999999999999999999999999999998876 45666778899999999999999999999987 77899
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
|||||..++.+..+....+.|++.+++.+++||..|+.|||.++|+|||||.+|||||.++++||+|||++..+... .
T Consensus 130 ivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~--k 207 (668)
T KOG0611|consen 130 IVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK--K 207 (668)
T ss_pred EEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccc--c
Confidence 99999999888888888889999999999999999999999999999999999999999999999999999877654 4
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccc
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATL 367 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 367 (478)
.++++||+|-|.+||++.+..+-++.+|.||||++||.|+.|..||.+.+....+.+|.......
T Consensus 208 fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrE--------------- 272 (668)
T KOG0611|consen 208 FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYRE--------------- 272 (668)
T ss_pred HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccC---------------
Confidence 56889999999999999986667899999999999999999999999999988888886532111
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccC
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFS 417 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~ 417 (478)
+.-|.++.-||+.||.++|++|.|+.++-.|=|.+
T Consensus 273 ---------------P~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 273 ---------------PETPSDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred ---------------CCCCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 24567789999999999999999999999998875
No 58
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=7.8e-47 Score=380.91 Aligned_cols=287 Identities=30% Similarity=0.514 Sum_probs=230.4
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecC----Cc
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRL----SC 204 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----~~ 204 (478)
.++|++++.||+|+||.||++.+..+++.||+|++............+.+|+.+++.++||||+++++++.... ..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 95 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQ 95 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccc
Confidence 56899999999999999999999999999999999765545555667788999999999999999999886432 23
Q ss_pred eEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 205 SIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
..|+||||+++++...+.. .+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+++.....
T Consensus 96 ~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~ 172 (355)
T cd07874 96 DVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 172 (355)
T ss_pred eeEEEhhhhcccHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCc
Confidence 5799999999887765532 4789999999999999999999999999999999999999999999999999765432
Q ss_pred CCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 285 HRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 285 ~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
.......+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..++..++.+..+++.......
T Consensus 173 --~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (355)
T cd07874 173 --FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 249 (355)
T ss_pred --cccCCccccCCccCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHH
Confidence 22244577999999999876 678999999999999999999999999999999999998888888776654432110
Q ss_pred ccccCCC---------CCCCc----cchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCC
Q 011763 365 ATLFKPQ---------QPYDS----SLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPY 421 (478)
Q Consensus 365 ~~~~~~~---------~~~~~----~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~ 421 (478)
....... ..... .........+..+++||.+||..||++|||+.|+|+||||+....
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~~ 319 (355)
T cd07874 250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWYD 319 (355)
T ss_pred HHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcccC
Confidence 0000000 00000 001111235678899999999999999999999999999986533
No 59
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=6.5e-47 Score=379.63 Aligned_cols=285 Identities=35% Similarity=0.589 Sum_probs=230.9
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecC----Cc
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRL----SC 204 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----~~ 204 (478)
.++|++++.||.|+||+||+|.+..+++.||+|++............+.+|+.+|+.++||||+++++++.... ..
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN 93 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence 46899999999999999999999999999999999765433344556778999999999999999999885421 24
Q ss_pred eEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 205 SIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
..|++++++.+.+...+. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 94 ~~~~~~~~~~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 171 (343)
T cd07878 94 EVYLVTNLMGADLNNIVK--CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDE 171 (343)
T ss_pred cEEEEeecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCC
Confidence 579999999776655443 336999999999999999999999999999999999999999999999999999765432
Q ss_pred CCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 285 HRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 285 ~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
.....+|+.|+|||++.+...++.++|||||||++|+|++|+.||.+.+..+.+..+....+.++...+.......
T Consensus 172 ----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (343)
T cd07878 172 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEH 247 (343)
T ss_pred ----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhh
Confidence 2345789999999998775678999999999999999999999999999889999998888888766654432211
Q ss_pred ccccCC--CCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 365 ATLFKP--QQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 365 ~~~~~~--~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
...+.. .......+...+...++.+.+||.+||..||.+|||+.|+|+||||...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~ 304 (343)
T cd07878 248 ARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQY 304 (343)
T ss_pred HHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhcc
Confidence 111000 0111122334455677889999999999999999999999999999864
No 60
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3e-47 Score=385.23 Aligned_cols=264 Identities=31% Similarity=0.465 Sum_probs=217.7
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
++|++++.||+|+||+||+|++..+++.||||++..... .......+.+|+.+|..++||||+++++++.+ ...+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~--~~~~~l 78 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQD--ENYLYL 78 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc--CCeEEE
Confidence 379999999999999999999999999999999975432 23445567789999999999999999999987 678999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC-
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ- 287 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~- 287 (478)
||||++++.+..+......+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++.........
T Consensus 79 v~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 79 IMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred EECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 9999998776666555667999999999999999999999999999999999999999999999999998654221100
Q ss_pred ------------------------------------CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCC
Q 011763 288 ------------------------------------PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKP 331 (478)
Q Consensus 288 ------------------------------------~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~ 331 (478)
.....+||+.|+|||++.+ ..++.++|||||||++|+|++|.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~~G~~ 237 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQ-TGYNKECDWWSLGVIMYEMLVGYP 237 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcC-CCCCCeeeeecchhHHHHhhcCCC
Confidence 1113468999999999876 678999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccC---HH
Q 011763 332 ILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT---AS 408 (478)
Q Consensus 332 pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t---a~ 408 (478)
||...+..+....+........ .+ ....+++++++||.+||. +|.+|++ +.
T Consensus 238 Pf~~~~~~~~~~~i~~~~~~~~---------------~~----------~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~ 291 (364)
T cd05599 238 PFCSDNPQETYRKIINWKETLQ---------------FP----------DEVPLSPEAKDLIKRLCC-EAERRLGNNGVN 291 (364)
T ss_pred CCCCCCHHHHHHHHHcCCCccC---------------CC----------CCCCCCHHHHHHHHHHcc-CHhhcCCCCCHH
Confidence 9998887776666543110000 00 001468899999999997 9999998 99
Q ss_pred HHHhCcccCCCCCC
Q 011763 409 AALASEYFSTKPYA 422 (478)
Q Consensus 409 e~L~hp~f~~~~~~ 422 (478)
++|.||||+...+.
T Consensus 292 ~ll~h~~~~~~~~~ 305 (364)
T cd05599 292 EIKSHPFFKGVDWE 305 (364)
T ss_pred HHhcCCCcCCCCHH
Confidence 99999999876553
No 61
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=5.8e-47 Score=370.14 Aligned_cols=261 Identities=23% Similarity=0.373 Sum_probs=213.5
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCC-hHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFE-PESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
.|++.+.||+|+||+||++.+..+++.||+|++...... ......+.+|+.+|..++|+||+++++++.+ ....|+|
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~--~~~~~lv 78 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYET--KDALCLV 78 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEcc--CCeEEEE
Confidence 388999999999999999999999999999998755432 2233456789999999999999999998877 5689999
Q ss_pred EeeccCCchhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 210 FEYMEHDITGLLS--CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 210 ~e~~~~~ll~~~~--~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
|||++++.+.... .....+++..+..++.||+.||.|||+++|+||||||+|||+++++.++|+|||++...... .
T Consensus 79 ~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--~ 156 (285)
T cd05631 79 LTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG--E 156 (285)
T ss_pred EEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC--C
Confidence 9999987664333 23346899999999999999999999999999999999999999999999999999765432 2
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccc
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATL 367 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 367 (478)
......+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||...........+...+.....
T Consensus 157 ~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~------------- 222 (285)
T cd05631 157 TVRGRVGTVGYMAPEVINN-EKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQE------------- 222 (285)
T ss_pred eecCCCCCCCccCHhhhcC-CCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccc-------------
Confidence 2234578999999999986 67899999999999999999999999887654443333332211110
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccC-----HHHHHhCcccCCCCC
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT-----ASAALASEYFSTKPY 421 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t-----a~e~L~hp~f~~~~~ 421 (478)
.....++.++.+||++||+.||.+||+ ++++++||||....+
T Consensus 223 ------------~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~ 269 (285)
T cd05631 223 ------------EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINF 269 (285)
T ss_pred ------------cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCH
Confidence 112357889999999999999999997 899999999987554
No 62
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=4.1e-47 Score=379.58 Aligned_cols=263 Identities=29% Similarity=0.422 Sum_probs=220.6
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCC-hHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFE-PESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
+|++++.||+|+||.||+|++..+++.||||++...... ......+.+|+.+|..++||||+++++++.. ...+|||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~--~~~~~lv 79 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQD--DEYLYLA 79 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEc--CCEEEEE
Confidence 699999999999999999999999999999999765322 2344567789999999999999999999877 6789999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL 289 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 289 (478)
|||++++.+..+......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..... ..
T Consensus 80 ~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~----~~ 155 (333)
T cd05600 80 MEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT----YA 155 (333)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc----cc
Confidence 99999877777766666899999999999999999999999999999999999999999999999999975543 23
Q ss_pred cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccC
Q 011763 290 TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFK 369 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 369 (478)
....+|+.|+|||++.+ ..++.++|||||||++|||++|.+||...+..+....+.........
T Consensus 156 ~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~--------------- 219 (333)
T cd05600 156 NSVVGSPDYMAPEVLRG-KGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQR--------------- 219 (333)
T ss_pred CCcccCccccChhHhcC-CCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccC---------------
Confidence 44578999999999887 57899999999999999999999999988877766665432110000
Q ss_pred CCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCC
Q 011763 370 PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPY 421 (478)
Q Consensus 370 ~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~ 421 (478)
+. .......+++++.+||.+||..+|.+||++.++++||||...++
T Consensus 220 ~~------~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~~ 265 (333)
T cd05600 220 PV------YDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVDW 265 (333)
T ss_pred CC------CCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCCCH
Confidence 00 00000357889999999999999999999999999999997655
No 63
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3.9e-47 Score=380.65 Aligned_cols=259 Identities=25% Similarity=0.359 Sum_probs=219.0
Q ss_pred cccceeeeeeeeecCceEEEEEEECCCC-cEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCce
Q 011763 128 RADAFEKLEKIGQGTYSSVFRARDLDTG-KIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCS 205 (478)
Q Consensus 128 ~~~~y~~~~~LG~G~~g~V~~~~~~~~~-~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 205 (478)
..++|++.+.||+|+||.||+|.+..++ ..||+|++..... .......+.+|+.++..++||||+++++++.+ ...
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~--~~~ 105 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKD--ESY 105 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEe--CCE
Confidence 4678999999999999999999876554 6899999875432 23445667889999999999999999999987 678
Q ss_pred EEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC
Q 011763 206 IYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH 285 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~ 285 (478)
+|+||||+.++.+..+......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 106 ~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~- 184 (340)
T PTZ00426 106 LYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR- 184 (340)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC-
Confidence 9999999998776666666668999999999999999999999999999999999999999999999999999765432
Q ss_pred CCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 286 RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 286 ~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
.....+|+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+.......+.......
T Consensus 185 ---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~------------- 247 (340)
T PTZ00426 185 ---TYTLCGTPEYIAPEILLN-VGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYF------------- 247 (340)
T ss_pred ---cceecCChhhcCHHHHhC-CCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCC-------------
Confidence 234578999999999876 668999999999999999999999999888776666664421111
Q ss_pred cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCcc-----CHHHHHhCcccCCCCCC
Q 011763 366 TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRA-----TASAALASEYFSTKPYA 422 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~-----ta~e~L~hp~f~~~~~~ 422 (478)
...+++.+.+||++||+.||.+|+ +++++++||||....|.
T Consensus 248 ----------------p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~ 293 (340)
T PTZ00426 248 ----------------PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWV 293 (340)
T ss_pred ----------------CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHH
Confidence 124678899999999999999995 89999999999876553
No 64
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.4e-46 Score=372.83 Aligned_cols=278 Identities=35% Similarity=0.660 Sum_probs=215.9
Q ss_pred eeeeeecCceEEEEEEEC--CCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEee
Q 011763 135 LEKIGQGTYSSVFRARDL--DTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEY 212 (478)
Q Consensus 135 ~~~LG~G~~g~V~~~~~~--~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~ 212 (478)
.++||+|+||+||+|++. .+++.||+|++..... ...+.+|+.+|++++||||+++++++.......+|+||||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 81 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence 468999999999999965 4678999999875432 2345689999999999999999999876666789999999
Q ss_pred ccCCchhhccC--------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEE----ecCCcEEEeecccccc
Q 011763 213 MEHDITGLLSC--------PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLV----NNEGVLKLADFGLANF 280 (478)
Q Consensus 213 ~~~~ll~~~~~--------~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl----~~~~~vkl~DFG~a~~ 280 (478)
+++++...+.. ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07868 82 AEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred cCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence 99876655431 22358999999999999999999999999999999999999 4557899999999976
Q ss_pred cCCCCC--CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCh---------HHHHHHHHHHc
Q 011763 281 SNTGHR--QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTE---------VEQLHKIFKLC 349 (478)
Q Consensus 281 ~~~~~~--~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~---------~~~~~~i~~~~ 349 (478)
...... .......+|+.|+|||++.+...++.++|||||||++|+|++|++||..... .+++..++..+
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07868 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 241 (317)
T ss_pred cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhc
Confidence 543211 1223457799999999998766789999999999999999999999976442 46778889999
Q ss_pred CCCCchhhccCCC-CCcccc-----C---CCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 350 GSPPDDYWKKSKL-PHATLF-----K---PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 350 g~~~~~~~~~~~~-~~~~~~-----~---~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
+.++...|..... +..... . ........+.......+..+.+||.+||++||.+|||++|+|+||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 242 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred CCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 9988887765321 110000 0 00001111111112345679999999999999999999999999998
No 65
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=3.7e-47 Score=379.37 Aligned_cols=266 Identities=26% Similarity=0.380 Sum_probs=219.3
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
++|++.+.||+|+||+||++++..+++.||+|+++.... ..+....+.+|+.+++.++|+||+++++++.+ ...+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~--~~~~~l 78 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQD--KDNLYL 78 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEec--CCeEEE
Confidence 369999999999999999999999999999999986543 23445667889999999999999999998877 678999
Q ss_pred EEeeccCCchhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 209 VFEYMEHDITGLLS-CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 209 v~e~~~~~ll~~~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
||||++++.+..+. .....+++..++.++.||+.||.|||+++|+||||||+||||+.++.+||+|||++.........
T Consensus 79 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~ 158 (330)
T cd05601 79 VMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV 158 (330)
T ss_pred EECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCce
Confidence 99999876555444 33367999999999999999999999999999999999999999999999999999766543322
Q ss_pred CccccccCCcccCcccccC-----CCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCC
Q 011763 288 PLTSRVVTLWYRPPELLLG-----ATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL 362 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~-----~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 362 (478)
......+|+.|+|||++.. ...++.++|||||||++|+|++|+.||...+....+.++........
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~--------- 229 (330)
T cd05601 159 NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLK--------- 229 (330)
T ss_pred eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccC---------
Confidence 2234567999999999863 35678899999999999999999999998887777766654210000
Q ss_pred CCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCCCC
Q 011763 363 PHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYAC 423 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~~~ 423 (478)
+ .....++.++.+||..||. ||.+|||+.+++.||||....+..
T Consensus 230 -----------~-----~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~~~~~ 273 (330)
T cd05601 230 -----------F-----PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKIDWNN 273 (330)
T ss_pred -----------C-----CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCCCHHH
Confidence 0 0012578899999999998 999999999999999998765543
No 66
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=3.4e-47 Score=382.51 Aligned_cols=265 Identities=32% Similarity=0.469 Sum_probs=220.6
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCC-hHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFE-PESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
++|++++.||+|+||+||+|++..+++.||||++...... ......+.+|+.+|..++|+||+++++++.+ ..++|+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~l 78 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQD--EEHLYL 78 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheec--CCeEEE
Confidence 3799999999999999999999999999999999765332 2445667889999999999999999999877 678999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC---
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH--- 285 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~--- 285 (478)
||||+.++.+..+......+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++.......
T Consensus 79 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 79 VMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred EEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 99999886666555555689999999999999999999999999999999999999999999999999997654332
Q ss_pred -------------------------CCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHH
Q 011763 286 -------------------------RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVE 340 (478)
Q Consensus 286 -------------------------~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~ 340 (478)
........+|+.|+|||++.+ ..++.++|||||||+||+|++|+.||...+..+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~ 237 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG-TPYGLECDWWSLGVILYEMLYGFPPFYSDTLQE 237 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcC-CCCCCceeeEecchhhhhhccCCCCCCCCCHHH
Confidence 112234568999999999887 678999999999999999999999999988777
Q ss_pred HHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccC-HHHHHhCcccCCC
Q 011763 341 QLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT-ASAALASEYFSTK 419 (478)
Q Consensus 341 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t-a~e~L~hp~f~~~ 419 (478)
...++........ . .....+++++.+||.+||. ||.+|++ +.++|+||||+..
T Consensus 238 ~~~~i~~~~~~~~---------------~----------p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 238 TYNKIINWKESLR---------------F----------PPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred HHHHHhccCCccc---------------C----------CCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 6666654111000 0 0012368899999999997 9999999 9999999999876
Q ss_pred CCCC
Q 011763 420 PYAC 423 (478)
Q Consensus 420 ~~~~ 423 (478)
.+..
T Consensus 292 ~~~~ 295 (350)
T cd05573 292 DWEN 295 (350)
T ss_pred CHHH
Confidence 6543
No 67
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.5e-46 Score=382.38 Aligned_cols=263 Identities=29% Similarity=0.413 Sum_probs=213.8
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
.|++++.||+|+||+||+|++..+++.||||++..... .......+.+|+.+|+.++||||+++++++.+ ...+|+|
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~--~~~~~lv 79 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQD--KDNLYFV 79 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec--CCEEEEE
Confidence 59999999999999999999999999999999976432 33455678889999999999999999999987 6789999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC----
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH---- 285 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~---- 285 (478)
|||++++.+..+......+++..++.++.||+.||.|||++||+||||||+||||+.++++||+|||++.......
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~ 159 (381)
T cd05626 80 MDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKY 159 (381)
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccc
Confidence 9999987666665556679999999999999999999999999999999999999999999999999975321000
Q ss_pred ------------------------------------------CCCccccccCCcccCcccccCCCCCCChhhHHHHHHHH
Q 011763 286 ------------------------------------------RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVF 323 (478)
Q Consensus 286 ------------------------------------------~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il 323 (478)
.......+||+.|+|||++.+ ..++.++|||||||++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlG~il 238 (381)
T cd05626 160 YQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR-KGYTQLCDWWSVGVIL 238 (381)
T ss_pred ccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcC-CCCCCccceeehhhHH
Confidence 000123578999999999876 6789999999999999
Q ss_pred HHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCC--C
Q 011763 324 AELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVE--P 401 (478)
Q Consensus 324 ~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~d--P 401 (478)
|||++|++||...+..+....+........ . .....+++++++||.+||..+ |
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~--------~-----------------~~~~~~s~~~~dli~~ll~~~~~~ 293 (381)
T cd05626 239 FEMLVGQPPFLAPTPTETQLKVINWENTLH--------I-----------------PPQVKLSPEAVDLITKLCCSAEER 293 (381)
T ss_pred HHHHhCCCCCcCCCHHHHHHHHHccccccC--------C-----------------CCCCCCCHHHHHHHHHHccCcccc
Confidence 999999999998877666655543111100 0 001257889999999976554 4
Q ss_pred CCccCHHHHHhCcccCCCCC
Q 011763 402 YKRATASAALASEYFSTKPY 421 (478)
Q Consensus 402 ~~R~ta~e~L~hp~f~~~~~ 421 (478)
..|+++.++|.||||....+
T Consensus 294 ~~R~~~~~~l~hp~f~~~~~ 313 (381)
T cd05626 294 LGRNGADDIKAHPFFSEVDF 313 (381)
T ss_pred cCCCCHHHHhcCcccCCCCh
Confidence 45999999999999987544
No 68
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-47 Score=370.70 Aligned_cols=258 Identities=28% Similarity=0.513 Sum_probs=234.0
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
-|.+.+.||+|.|..|-+|++.-+|..||||++.+..++......+.+|++.|+.++|||||+||++... ...+|||+
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDT--QTKlyLiL 96 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDT--QTKLYLIL 96 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcc--cceEEEEE
Confidence 5889999999999999999999999999999999988888888889999999999999999999999877 56799999
Q ss_pred eeccC-CchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEec-CCcEEEeecccccccCCCCCCC
Q 011763 211 EYMEH-DITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNN-EGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 211 e~~~~-~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~-~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
|+-.+ ++.+++......+.+..+++|+.||+.|+.|||+..||||||||+||++-+ -|.|||+|||++..+.++ ..
T Consensus 97 ELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG--~k 174 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG--KK 174 (864)
T ss_pred EecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCc--ch
Confidence 99987 566677777778999999999999999999999999999999999988765 489999999999877765 45
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF 368 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 368 (478)
+++.||...|-|||+++|..+..+++||||||||||.|++|++||+..++.+++.+|+..-...|
T Consensus 175 L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvP--------------- 239 (864)
T KOG4717|consen 175 LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVP--------------- 239 (864)
T ss_pred hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCc---------------
Confidence 67889999999999999977778899999999999999999999999999999999988655444
Q ss_pred CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCC
Q 011763 369 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPY 421 (478)
Q Consensus 369 ~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~ 421 (478)
..++.+.++||.+||..||.+|.+.+++..|+|++....
T Consensus 240 --------------shvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~ 278 (864)
T KOG4717|consen 240 --------------SHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDR 278 (864)
T ss_pred --------------hhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCC
Confidence 367899999999999999999999999999999986543
No 69
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=5.8e-47 Score=384.84 Aligned_cols=262 Identities=29% Similarity=0.394 Sum_probs=213.9
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
+|++++.||+|+||+||++++..+++.||||++..... .......+.+|+.+|+.++|+||+++++.+.+ ...+|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~--~~~~~lv 79 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQD--KDNLYFV 79 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEc--CCEEEEE
Confidence 69999999999999999999999999999999865322 22334567789999999999999999999987 6789999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC-----
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG----- 284 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~----- 284 (478)
|||++++.+..+......+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+|......
T Consensus 80 ~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~ 159 (376)
T cd05598 80 MDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (376)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccc
Confidence 999998776666655667899999999999999999999999999999999999999999999999997432100
Q ss_pred -------------------------------------CCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHH
Q 011763 285 -------------------------------------HRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELL 327 (478)
Q Consensus 285 -------------------------------------~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ell 327 (478)
........+||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvilyell 238 (376)
T cd05598 160 YQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEML 238 (376)
T ss_pred cccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcC-CCCCcceeeeeccceeeehh
Confidence 0000123478999999999876 67899999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCcc--
Q 011763 328 IGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRA-- 405 (478)
Q Consensus 328 tG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~-- 405 (478)
+|+.||.+.+..+....+........ ......++.++.+||.+|+ .+|.+|+
T Consensus 239 ~G~~Pf~~~~~~~~~~~i~~~~~~~~-------------------------~~~~~~~s~~~~~li~~l~-~~p~~R~~~ 292 (376)
T cd05598 239 VGQPPFLADTPAETQLKVINWETTLH-------------------------IPSQAKLSREASDLILRLC-CGAEDRLGK 292 (376)
T ss_pred hCCCCCCCCCHHHHHHHHhccCcccc-------------------------CCCCCCCCHHHHHHHHHHh-cCHhhcCCC
Confidence 99999998887766655432110000 0001357889999999987 4999999
Q ss_pred -CHHHHHhCcccCCCCC
Q 011763 406 -TASAALASEYFSTKPY 421 (478)
Q Consensus 406 -ta~e~L~hp~f~~~~~ 421 (478)
|+.++|+||||+...+
T Consensus 293 ~t~~ell~h~~~~~~~~ 309 (376)
T cd05598 293 NGADEIKAHPFFKGIDF 309 (376)
T ss_pred CCHHHHhCCCCcCCCCH
Confidence 9999999999987544
No 70
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-47 Score=355.69 Aligned_cols=262 Identities=26% Similarity=0.399 Sum_probs=229.5
Q ss_pred cccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceE
Q 011763 128 RADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSI 206 (478)
Q Consensus 128 ~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 206 (478)
..++|..++.||+|.||+|.+|+.+.+++.||+|+++++.. ..+.+...+.|-++|+..+||++..|-..|+. .+++
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt--~drl 243 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQT--QDRL 243 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhcc--CceE
Confidence 47899999999999999999999999999999999988764 45556667789999999999999999777876 7889
Q ss_pred EEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 207 YLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 207 ~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
|+||||..|+.+...+.....|++...+.+-.+|+.||.|||+++||+||||.+|+|||.+|++||+|||+++..-...
T Consensus 244 CFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g- 322 (516)
T KOG0690|consen 244 CFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYG- 322 (516)
T ss_pred EEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhccccc-
Confidence 9999999999888888888899999999999999999999999999999999999999999999999999997543222
Q ss_pred CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcc
Q 011763 287 QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHAT 366 (478)
Q Consensus 287 ~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 366 (478)
....+.||||.|+|||++.. ..|+.++|+|.+||+||||++|+.||...+....++-|.-.--..
T Consensus 323 ~t~kTFCGTPEYLAPEVleD-nDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kF-------------- 387 (516)
T KOG0690|consen 323 DTTKTFCGTPEYLAPEVLED-NDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKF-------------- 387 (516)
T ss_pred ceeccccCChhhcCchhhcc-ccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccC--------------
Confidence 34567899999999999986 889999999999999999999999999888777666654321111
Q ss_pred ccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccC-----HHHHHhCcccCCCCCC
Q 011763 367 LFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT-----ASAALASEYFSTKPYA 422 (478)
Q Consensus 367 ~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t-----a~e~L~hp~f~~~~~~ 422 (478)
...++++++.||..+|..||.+|.- +.|+.+|+||....|.
T Consensus 388 ---------------Pr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~ 433 (516)
T KOG0690|consen 388 ---------------PRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWE 433 (516)
T ss_pred ---------------CccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHH
Confidence 1368999999999999999999974 8999999999987663
No 71
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.1e-46 Score=383.51 Aligned_cols=262 Identities=30% Similarity=0.419 Sum_probs=214.7
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
.|++++.||+|+||+||+|++..+++.||+|++..... .......+.+|+.+|+.++|+||+++++.+.+ ...+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~--~~~~~lv 79 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQD--KDNLYFV 79 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe--CCEEEEE
Confidence 59999999999999999999999999999999975432 23445677889999999999999999999987 6789999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC----
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH---- 285 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~---- 285 (478)
|||++++.+..+......+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++.......
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~ 159 (382)
T cd05625 80 MDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (382)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccc
Confidence 9999987665555555678999999999999999999999999999999999999999999999999975321000
Q ss_pred ------------------------------------------CCCccccccCCcccCcccccCCCCCCChhhHHHHHHHH
Q 011763 286 ------------------------------------------RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVF 323 (478)
Q Consensus 286 ------------------------------------------~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il 323 (478)
.......+||+.|+|||++.+ ..++.++|||||||+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlGvil 238 (382)
T cd05625 160 YQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVIL 238 (382)
T ss_pred cccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcC-CCCCCeeeEEechHHH
Confidence 000123468999999999876 6789999999999999
Q ss_pred HHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCC
Q 011763 324 AELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYK 403 (478)
Q Consensus 324 ~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~ 403 (478)
|||++|++||.+.+..+...++......... .....+++++.+||.+|+ .||.+
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~-------------------------p~~~~~s~~~~~li~~l~-~~p~~ 292 (382)
T cd05625 239 YEMLVGQPPFLAQTPLETQMKVINWQTSLHI-------------------------PPQAKLSPEASDLIIKLC-RGPED 292 (382)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHccCCCcCC-------------------------CCcccCCHHHHHHHHHHc-cCHhH
Confidence 9999999999988877766665431111000 001357889999999987 59999
Q ss_pred ccC---HHHHHhCcccCCCCC
Q 011763 404 RAT---ASAALASEYFSTKPY 421 (478)
Q Consensus 404 R~t---a~e~L~hp~f~~~~~ 421 (478)
|++ +.++++||||+...+
T Consensus 293 R~~~~~~~ei~~hp~f~~~~~ 313 (382)
T cd05625 293 RLGKNGADEIKAHPFFKTIDF 313 (382)
T ss_pred cCCCCCHHHHhcCCCcCCcCh
Confidence 997 999999999987554
No 72
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.6e-46 Score=380.51 Aligned_cols=268 Identities=25% Similarity=0.378 Sum_probs=221.0
Q ss_pred ccccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCce
Q 011763 127 LRADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCS 205 (478)
Q Consensus 127 ~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 205 (478)
+..++|++++.||+|+||.||++++..+++.||+|++..... .......+.+|+.+++.++||||+++++++.+ ...
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~--~~~ 117 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQD--DKY 117 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEec--CCE
Confidence 446799999999999999999999999999999999975432 22334557789999999999999999998877 678
Q ss_pred EEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC
Q 011763 206 IYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH 285 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~ 285 (478)
+||||||++++.+..+... ..+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++.......
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~ 196 (370)
T cd05596 118 LYMVMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANG 196 (370)
T ss_pred EEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCC
Confidence 9999999998766655543 368999999999999999999999999999999999999999999999999997654332
Q ss_pred CCCccccccCCcccCcccccCC---CCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCC
Q 011763 286 RQPLTSRVVTLWYRPPELLLGA---TDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL 362 (478)
Q Consensus 286 ~~~~~~~~~t~~y~APE~l~~~---~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 362 (478)
.......++|+.|+|||++.+. ..++.++|||||||++|||++|++||.+.+....+.++........
T Consensus 197 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~--------- 267 (370)
T cd05596 197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLT--------- 267 (370)
T ss_pred cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCC---------
Confidence 2233456789999999998652 2478899999999999999999999999888777777654211100
Q ss_pred CCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCC--ccCHHHHHhCcccCCCCCC
Q 011763 363 PHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYK--RATASAALASEYFSTKPYA 422 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~--R~ta~e~L~hp~f~~~~~~ 422 (478)
+ .....++.++.+||.+||..+|.+ |+|+.++|+||||+...|.
T Consensus 268 -----------~-----~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~~~~ 313 (370)
T cd05596 268 -----------F-----PDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKNDQWT 313 (370)
T ss_pred -----------C-----CCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCCChh
Confidence 0 001257889999999999999998 9999999999999876543
No 73
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2e-46 Score=373.05 Aligned_cols=253 Identities=26% Similarity=0.407 Sum_probs=212.7
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeecc
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYME 214 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~ 214 (478)
+.||+|+||.||++++..+++.||+|++..... .......+.+|+.+++.++||||++++++|.. ...+||||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~--~~~~~lv~E~~~ 78 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT--HDRLCFVMEYAN 78 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEec--CCEEEEEEeCCC
Confidence 468999999999999999999999999976432 23445566789999999999999999999877 678999999999
Q ss_pred CCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCcccccc
Q 011763 215 HDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVV 294 (478)
Q Consensus 215 ~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~ 294 (478)
++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... .......+
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~g 157 (323)
T cd05595 79 GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-ATMKTFCG 157 (323)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCC-CccccccC
Confidence 87776666666689999999999999999999999999999999999999999999999999987532221 22234568
Q ss_pred CCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCC
Q 011763 295 TLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPY 374 (478)
Q Consensus 295 t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 374 (478)
|+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+.......+......
T Consensus 158 t~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~----------------------- 213 (323)
T cd05595 158 TPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR----------------------- 213 (323)
T ss_pred CcCcCCcccccC-CCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-----------------------
Confidence 999999999876 67899999999999999999999999988777666655431100
Q ss_pred CccchhcccCCchhHHHHHHHhcCCCCCCcc-----CHHHHHhCcccCCCCC
Q 011763 375 DSSLRETFKDLPTTAVNLIETLLSVEPYKRA-----TASAALASEYFSTKPY 421 (478)
Q Consensus 375 ~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~-----ta~e~L~hp~f~~~~~ 421 (478)
....+++++.+||.+||..||.+|+ ++.++|+||||....+
T Consensus 214 ------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~ 259 (323)
T cd05595 214 ------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 259 (323)
T ss_pred ------CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence 0125788999999999999999998 8999999999987554
No 74
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.1e-45 Score=360.31 Aligned_cols=285 Identities=39% Similarity=0.700 Sum_probs=235.9
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
+|++.+.||.|+||.||+|.+..+++.||+|++............+.+|+.++++++||||+++++++.. ....|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~~v~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH--GSGFVLVM 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec--CCeeEEEe
Confidence 4899999999999999999999899999999998765545556678899999999999999999999987 67899999
Q ss_pred eeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCcc
Q 011763 211 EYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLT 290 (478)
Q Consensus 211 e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~ 290 (478)
||+.+++...+......+++..++.++.||+.+|.|||+++|+|+||||+||+++.++.++|+|||++............
T Consensus 79 e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (286)
T cd07832 79 EYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYS 158 (286)
T ss_pred cccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccc
Confidence 99955555555555567999999999999999999999999999999999999999999999999999766543322334
Q ss_pred ccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCC-CCccccC
Q 011763 291 SRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL-PHATLFK 369 (478)
Q Consensus 291 ~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~-~~~~~~~ 369 (478)
...++..|+|||++.+...++.++|||||||++|+|++|.+||.+.++.+.+..+...++.+....|..... .......
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07832 159 HQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKIT 238 (286)
T ss_pred cccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhccc
Confidence 456789999999987656678999999999999999999999999999999999999888887766654321 1111111
Q ss_pred CCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccC
Q 011763 370 PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFS 417 (478)
Q Consensus 370 ~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~ 417 (478)
........+...++..+..+.+||.+||..||.+|||++++|+||||.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 239 FPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred CCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 111111223445567889999999999999999999999999999994
No 75
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.2e-46 Score=382.64 Aligned_cols=263 Identities=28% Similarity=0.428 Sum_probs=214.0
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
++|++++.||+|+||+||++++..+++.||||++..... .......+.+|+.+|+.++||||++++++|.+ ..++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~--~~~~~l 78 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQD--AQYLYL 78 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEc--CCeeEE
Confidence 379999999999999999999999999999999875432 23445667889999999999999999999987 678999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC--
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-- 286 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~-- 286 (478)
||||++++.+..+......+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+++.......
T Consensus 79 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 79 IMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 999998876666655566799999999999999999999999999999999999999999999999999863211000
Q ss_pred -----------C---------------------------------CccccccCCcccCcccccCCCCCCChhhHHHHHHH
Q 011763 287 -----------Q---------------------------------PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCV 322 (478)
Q Consensus 287 -----------~---------------------------------~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~i 322 (478)
. .....+||+.|+|||++.+ ..++.++|||||||+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvi 237 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQ-QGYGQECDWWSLGAI 237 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHcc-CCCCCceeeEecchh
Confidence 0 0012468999999999876 678999999999999
Q ss_pred HHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCC
Q 011763 323 FAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPY 402 (478)
Q Consensus 323 l~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~ 402 (478)
+|||++|.+||.+.+..+.+..+........ ++ ....++.++.+||.+||. +|.
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~--------~p-----------------~~~~~s~~~~dli~~lL~-~~~ 291 (377)
T cd05629 238 MFECLIGWPPFCSENSHETYRKIINWRETLY--------FP-----------------DDIHLSVEAEDLIRRLIT-NAE 291 (377)
T ss_pred hhhhhcCCCCCCCCCHHHHHHHHHccCCccC--------CC-----------------CCCCCCHHHHHHHHHHhc-CHh
Confidence 9999999999998887777666653110000 00 012467899999999998 777
Q ss_pred Cc---cCHHHHHhCcccCCCCC
Q 011763 403 KR---ATASAALASEYFSTKPY 421 (478)
Q Consensus 403 ~R---~ta~e~L~hp~f~~~~~ 421 (478)
+| +|+.++|.||||+...+
T Consensus 292 ~r~~r~~~~~~l~hp~~~~~~~ 313 (377)
T cd05629 292 NRLGRGGAHEIKSHPFFRGVDW 313 (377)
T ss_pred hcCCCCCHHHHhcCCCcCCCCH
Confidence 65 59999999999986543
No 76
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.5e-45 Score=368.66 Aligned_cols=261 Identities=28% Similarity=0.402 Sum_probs=208.3
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|+++++||+|+||+||++++..+++.||||++.... .......+.+|+.+|+.++|+||+++++++.. ...+|+
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~l 149 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDH--NGEIQV 149 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEecc--CCeEEE
Confidence 457999999999999999999999999999999986543 34455678899999999999999999999877 677999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||||+.++.+... ..+.+..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... ..
T Consensus 150 v~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~~ 224 (353)
T PLN00034 150 LLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM-DP 224 (353)
T ss_pred EEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccc-cc
Confidence 9999998765432 245688889999999999999999999999999999999999999999999997654321 22
Q ss_pred ccccccCCcccCcccccC----CCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 289 LTSRVVTLWYRPPELLLG----ATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~----~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
.....+|..|+|||++.. ...++.++|||||||++|||++|+.||......+....+.......+
T Consensus 225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----------- 293 (353)
T PLN00034 225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQP----------- 293 (353)
T ss_pred ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCC-----------
Confidence 344578999999998743 13345689999999999999999999974432222221111110000
Q ss_pred ccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCCC
Q 011763 365 ATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYA 422 (478)
Q Consensus 365 ~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~~ 422 (478)
......++.++.+||.+||..||++|||+.|+|+||||......
T Consensus 294 --------------~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~~ 337 (353)
T PLN00034 294 --------------PEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQPG 337 (353)
T ss_pred --------------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCCcc
Confidence 00113578899999999999999999999999999999875443
No 77
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2e-46 Score=373.87 Aligned_cols=253 Identities=25% Similarity=0.401 Sum_probs=211.7
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeecc
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYME 214 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~ 214 (478)
+.||+|+||.||++++..+++.||+|++..... .......+.+|+.+|+.++||||+++++++.. ...+||||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~lv~Ey~~ 78 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQT--KDRLCFVMEYVN 78 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc--CCEEEEEEeCCC
Confidence 468999999999999999999999999976432 23445667789999999999999999998877 678999999999
Q ss_pred CCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCcccccc
Q 011763 215 HDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVV 294 (478)
Q Consensus 215 ~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~ 294 (478)
++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+++...... ......++
T Consensus 79 ~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~~~~~g 157 (328)
T cd05593 79 GGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA-ATMKTFCG 157 (328)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcc-cccccccC
Confidence 87776666666689999999999999999999999999999999999999999999999999987543221 22234578
Q ss_pred CCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCC
Q 011763 295 TLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPY 374 (478)
Q Consensus 295 t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 374 (478)
|+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+....+.....
T Consensus 158 t~~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~------------------------ 212 (328)
T cd05593 158 TPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDI------------------------ 212 (328)
T ss_pred CcCccChhhhcC-CCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCc------------------------
Confidence 999999999876 6789999999999999999999999988776665554422100
Q ss_pred CccchhcccCCchhHHHHHHHhcCCCCCCcc-----CHHHHHhCcccCCCCC
Q 011763 375 DSSLRETFKDLPTTAVNLIETLLSVEPYKRA-----TASAALASEYFSTKPY 421 (478)
Q Consensus 375 ~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~-----ta~e~L~hp~f~~~~~ 421 (478)
.....++.++.+||.+||..||.+|+ ++.++|+||||....+
T Consensus 213 -----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~ 259 (328)
T cd05593 213 -----KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNW 259 (328)
T ss_pred -----cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 00135788999999999999999997 8999999999987544
No 78
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9e-48 Score=371.24 Aligned_cols=257 Identities=28% Similarity=0.449 Sum_probs=223.1
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
...|..++.||+|.||.||+|.+..+++.||+|+++.+.. ....+.+.+|+.+|..++++||.++|+.|.. +..+++
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~-~deIediqqei~~Ls~~~~~~it~yygsyl~--g~~Lwi 88 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA-EDEIEDIQQEISVLSQCDSPNITEYYGSYLK--GTKLWI 88 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhc-chhhHHHHHHHHHHHhcCcchHHhhhhheee--cccHHH
Confidence 3468999999999999999999999999999999998764 4557888999999999999999999999988 778999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
+||||.|+....+...+..+.+..+..++++++.||.|||.++.+|||||+.||||..+|.+||+|||.+..........
T Consensus 89 iMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr 168 (467)
T KOG0201|consen 89 IMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR 168 (467)
T ss_pred HHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhcc
Confidence 99999998888888888778999999999999999999999999999999999999999999999999997766543333
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF 368 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 368 (478)
.+.+|||.|||||++.+ ..|+.++||||||++.+||++|.||+........+..| |
T Consensus 169 -~tfvGTPfwMAPEVI~~-~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI-------p--------------- 224 (467)
T KOG0201|consen 169 -KTFVGTPFWMAPEVIKQ-SGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI-------P--------------- 224 (467)
T ss_pred -ccccccccccchhhhcc-ccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec-------c---------------
Confidence 67899999999999995 78999999999999999999999999876653322221 1
Q ss_pred CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 369 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 369 ~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
....+.|. .++++.+++|+..||++||+.||+|.++|+|+|++.
T Consensus 225 ---k~~PP~L~---~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 225 ---KSAPPRLD---GDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred ---CCCCCccc---cccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence 11111121 267889999999999999999999999999999986
No 79
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.4e-46 Score=370.64 Aligned_cols=250 Identities=28% Similarity=0.426 Sum_probs=210.3
Q ss_pred eeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeeccCC
Q 011763 138 IGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHD 216 (478)
Q Consensus 138 LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~~~ 216 (478)
||+|+||+||++++..+++.||+|++..... .......+.+|+.+|.+++||||+++++++.. ...+|+||||++++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~g 78 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQS--PEKLYLVLAFINGG 78 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEec--CCeEEEEEcCCCCC
Confidence 6999999999999999999999999975432 33445667789999999999999999998877 67899999999987
Q ss_pred chhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccccCC
Q 011763 217 ITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTL 296 (478)
Q Consensus 217 ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~t~ 296 (478)
.+..+......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...... ......++|+
T Consensus 79 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~ 157 (312)
T cd05585 79 ELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTNTFCGTP 157 (312)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC-CccccccCCc
Confidence 776665556689999999999999999999999999999999999999999999999999987543221 2233457899
Q ss_pred cccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCc
Q 011763 297 WYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDS 376 (478)
Q Consensus 297 ~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (478)
.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+....+.....
T Consensus 158 ~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~-------------------------- 210 (312)
T cd05585 158 EYLAPELLLG-HGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPL-------------------------- 210 (312)
T ss_pred ccCCHHHHcC-CCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC--------------------------
Confidence 9999999886 6789999999999999999999999998877666665543110
Q ss_pred cchhcccCCchhHHHHHHHhcCCCCCCcc---CHHHHHhCcccCCCC
Q 011763 377 SLRETFKDLPTTAVNLIETLLSVEPYKRA---TASAALASEYFSTKP 420 (478)
Q Consensus 377 ~l~~~~~~~~~~l~~Li~~mL~~dP~~R~---ta~e~L~hp~f~~~~ 420 (478)
.....+++++.+||.+||..||.+|| ++.++|.||||....
T Consensus 211 ---~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~ 254 (312)
T cd05585 211 ---RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLS 254 (312)
T ss_pred ---CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCC
Confidence 00135788999999999999999997 589999999998753
No 80
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.4e-45 Score=360.58 Aligned_cols=291 Identities=42% Similarity=0.711 Sum_probs=235.8
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCC---hHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFE---PESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
+|++.+.||.|+||.||+|.+..+++.||+|++...... ......+..|+.+++.++|+||+++++++.+ ....|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~ 78 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH--KSNIN 78 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec--CCEEE
Confidence 488999999999999999999989999999999865543 3334556789999999999999999999987 67899
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
+||||+.+.+...+......+++..+..++.||+.||.|||++||+|+||+|+|||++.++.++|+|||++....... .
T Consensus 79 lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-~ 157 (298)
T cd07841 79 LVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN-R 157 (298)
T ss_pred EEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC-c
Confidence 999999555555544433479999999999999999999999999999999999999999999999999997665432 1
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccc
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATL 367 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 367 (478)
......+++.|+|||++.+...++.++|||||||++|+|++|.++|.+.+..+.+.++...++.+....|....... ..
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 236 (298)
T cd07841 158 KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLP-DY 236 (298)
T ss_pred cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccc-cc
Confidence 22334557889999998765678899999999999999999999999999888888888888887777665422111 11
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCCCCCC
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYACDL 425 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~~~~~ 425 (478)
..........+...+..++..+.+||.+||.+||++|||+.++|.||||.+.+.+..+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~~~ 294 (298)
T cd07841 237 VEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPTPP 294 (298)
T ss_pred ccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCCCC
Confidence 1111112223344456778999999999999999999999999999999997776543
No 81
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.7e-45 Score=367.65 Aligned_cols=281 Identities=24% Similarity=0.328 Sum_probs=217.1
Q ss_pred cccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEE
Q 011763 128 RADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 128 ~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
..++|++++.||+|+||.||++++..++..||+|++..+. .......+.+|+++|+.++||||+++++++.. ...++
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~ 79 (331)
T cd06649 3 KDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS--DGEIS 79 (331)
T ss_pred CcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE--CCEEE
Confidence 3578999999999999999999999999999999997643 34556678899999999999999999999987 66799
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSR-GVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
+||||++++.+..+......+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 157 (331)
T cd06649 80 ICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (331)
T ss_pred EEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc--
Confidence 9999999877776666666799999999999999999999986 6999999999999999999999999998755332
Q ss_pred CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCc----hhhccCC-
Q 011763 287 QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPD----DYWKKSK- 361 (478)
Q Consensus 287 ~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~----~~~~~~~- 361 (478)
......+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+.... ++.+.. ..+....
T Consensus 158 -~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 231 (331)
T cd06649 158 -MANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAI----FGRPVVDGEEGEPHSISP 231 (331)
T ss_pred -ccccCCCCcCcCCHhHhcC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----hcccccccccCCccccCc
Confidence 2234567999999999886 6789999999999999999999999987665443322 222111 0000000
Q ss_pred CCCc--cc----cCCCCCCCc------------cchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 362 LPHA--TL----FKPQQPYDS------------SLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 362 ~~~~--~~----~~~~~~~~~------------~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
.+.. .. .....+... ........+++++++||.+||.+||++|||+.++|+||||+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 307 (331)
T cd06649 232 RPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS 307 (331)
T ss_pred ccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence 0000 00 000000000 0000012467889999999999999999999999999999863
No 82
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.4e-46 Score=373.79 Aligned_cols=264 Identities=27% Similarity=0.408 Sum_probs=210.2
Q ss_pred ceeeeeeeeecCceEEEEEEEC---CCCcEEEEEEeecCCC--ChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCc
Q 011763 131 AFEKLEKIGQGTYSSVFRARDL---DTGKIVALKKVRFDNF--EPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSC 204 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~---~~~~~vAlK~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 204 (478)
+|++++.||+|+||+||++++. .+++.||+|++..... .....+.+..|+.+|..+ +|+||+++++++.. ..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~--~~ 78 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQT--EA 78 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEec--CC
Confidence 4899999999999999999864 4789999999975432 223345677899999999 59999999988876 67
Q ss_pred eEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 205 SIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
.+|+||||+.++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+++.....
T Consensus 79 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 79 KLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCcccccc
Confidence 79999999998766655555567999999999999999999999999999999999999999999999999999765433
Q ss_pred CCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 285 HRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 285 ~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
.........+|+.|+|||++.+...++.++|||||||++|+|++|+.||...........+.........
T Consensus 159 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~---------- 228 (332)
T cd05614 159 EKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDP---------- 228 (332)
T ss_pred CCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCC----------
Confidence 3233334578999999999886556889999999999999999999999754322111111111000000
Q ss_pred ccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCcc-----CHHHHHhCcccCCCCC
Q 011763 365 ATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRA-----TASAALASEYFSTKPY 421 (478)
Q Consensus 365 ~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~-----ta~e~L~hp~f~~~~~ 421 (478)
.....++..+.+||.+||+.||++|| ++.++|+||||+...+
T Consensus 229 ---------------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~ 275 (332)
T cd05614 229 ---------------PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDW 275 (332)
T ss_pred ---------------CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence 00125788899999999999999999 8899999999987544
No 83
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=6e-46 Score=368.93 Aligned_cols=252 Identities=31% Similarity=0.440 Sum_probs=212.5
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcE-EEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKI-VALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~-vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
.+.+.+.+.||.|+||+||++... |+. ||+|++..........+.+.+|+.+|.+|+|||||++++++..+.. .++
T Consensus 40 ~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~-~~~ 116 (362)
T KOG0192|consen 40 PDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG-SLC 116 (362)
T ss_pred hHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC-ceE
Confidence 446677777999999999999874 455 9999998776666657889999999999999999999999987422 689
Q ss_pred EEEeeccCCchhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCC-ceeccCCCCcEEEecCC-cEEEeecccccccCC
Q 011763 208 LVFEYMEHDITGLLSCP--DIKFSEAQIKCYMNQLLHGLEHCHSRG-VLHRDIKGSNLLVNNEG-VLKLADFGLANFSNT 283 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~g-ivHrDlkp~NILl~~~~-~vkl~DFG~a~~~~~ 283 (478)
|||||++++.+..+... ...++...+..++.||+.||.|||+++ ||||||||+||||+.++ ++||+|||+++....
T Consensus 117 iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 117 IVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVI 196 (362)
T ss_pred EEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecc
Confidence 99999999877776654 678999999999999999999999999 99999999999999998 999999999986654
Q ss_pred CCCCCccccccCCcccCcccccC-CCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCC
Q 011763 284 GHRQPLTSRVVTLWYRPPELLLG-ATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL 362 (478)
Q Consensus 284 ~~~~~~~~~~~t~~y~APE~l~~-~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 362 (478)
.. ...+...||+.|||||++.+ ...|+.++||||||++||||+||+.||......+....+......|+.
T Consensus 197 ~~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~-------- 267 (362)
T KOG0192|consen 197 SK-TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPI-------- 267 (362)
T ss_pred cc-ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCC--------
Confidence 22 33344788999999999985 267999999999999999999999999999986655555443222211
Q ss_pred CCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHH
Q 011763 363 PHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAAL 411 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L 411 (478)
....++.+..||.+|+..||.+||+..+++
T Consensus 268 -------------------p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~ 297 (362)
T KOG0192|consen 268 -------------------PKECPPHLSSLMERCWLVDPSRRPSFLEIV 297 (362)
T ss_pred -------------------CccCCHHHHHHHHHhCCCCCCcCCCHHHHH
Confidence 123788999999999999999999999886
No 84
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=5.4e-46 Score=376.54 Aligned_cols=267 Identities=25% Similarity=0.361 Sum_probs=218.4
Q ss_pred ccccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCce
Q 011763 127 LRADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCS 205 (478)
Q Consensus 127 ~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 205 (478)
...++|++++.||+|+||.||++++..+++.||+|++..... .......+.+|+.+++.++||||+++++++.. ...
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~--~~~ 117 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQD--DKY 117 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc--CCE
Confidence 346789999999999999999999999999999999975322 23334567789999999999999999999877 678
Q ss_pred EEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC
Q 011763 206 IYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH 285 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~ 285 (478)
+|+||||++++.+..+.... .+++..++.++.||+.||.|||+++|+||||||+||||+.++.+||+|||++.......
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~ 196 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG 196 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCC
Confidence 99999999986665555433 58999999999999999999999999999999999999999999999999997654332
Q ss_pred CCCccccccCCcccCcccccCC---CCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCC
Q 011763 286 RQPLTSRVVTLWYRPPELLLGA---TDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL 362 (478)
Q Consensus 286 ~~~~~~~~~t~~y~APE~l~~~---~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 362 (478)
.......++|+.|+|||++.+. ..++.++|||||||+||+|++|++||.+.+....+.++......+..
T Consensus 197 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~-------- 268 (370)
T cd05621 197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNF-------- 268 (370)
T ss_pred ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCC--------
Confidence 2233456789999999998652 23788999999999999999999999998887777776542211100
Q ss_pred CCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCC--ccCHHHHHhCcccCCCCC
Q 011763 363 PHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYK--RATASAALASEYFSTKPY 421 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~--R~ta~e~L~hp~f~~~~~ 421 (478)
. ....++..+++||..||..+|.+ |+|+.|+|+||||+...+
T Consensus 269 ------------p-----~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~~~ 312 (370)
T cd05621 269 ------------P-----EDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQW 312 (370)
T ss_pred ------------C-----CcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCCCc
Confidence 0 01246888999999999865544 899999999999987544
No 85
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.1e-45 Score=360.19 Aligned_cols=282 Identities=41% Similarity=0.736 Sum_probs=230.0
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
+|++++.||.|++|.||+|++..+++.||||++..+.........+.+|++++++++||||+++++++.+ ....++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~ 78 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT--ENKLYLVF 78 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhccc--CCcEEEEe
Confidence 4899999999999999999999999999999997655444445667889999999999999999999876 67799999
Q ss_pred eeccCCchhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc
Q 011763 211 EYMEHDITGLLSC-PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL 289 (478)
Q Consensus 211 e~~~~~ll~~~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 289 (478)
||+.+++...+.. ....+++..++.++.||+.||+|||+++++|+||+|+||+++.++.+||+|||++....... ...
T Consensus 79 e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~-~~~ 157 (284)
T cd07860 79 EFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTY 157 (284)
T ss_pred eccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc-ccc
Confidence 9998766555433 34568999999999999999999999999999999999999999999999999987554322 222
Q ss_pred cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCC-CCcccc
Q 011763 290 TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL-PHATLF 368 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~-~~~~~~ 368 (478)
....+++.|+|||++.+...++.++|||||||++|+|++|+.||...++.+.+.++++..+.++...|..... +.....
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07860 158 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPS 237 (284)
T ss_pred ccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhh
Confidence 3345688899999887655678899999999999999999999999999999999999888888776653221 110000
Q ss_pred CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 369 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 369 ~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
.+ ......+....+.+++++++||.+||+.||.+|||+.++|.||||
T Consensus 238 ~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 238 FP-KWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred cc-cccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 00 111122333345678899999999999999999999999999998
No 86
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-45 Score=370.62 Aligned_cols=277 Identities=22% Similarity=0.334 Sum_probs=212.8
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
..+|++++.||+|+||.||+|++..+++.||+|+..... ...|+.+|++++|+||+++++++.. ....|+
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~--------~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~l 134 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT--------TLIEAMLLQNVNHPSVIRMKDTLVS--GAITCM 134 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc--------cHHHHHHHHhCCCCCCcChhheEEe--CCeeEE
Confidence 457999999999999999999999999999999854321 2459999999999999999999987 667899
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
|||++.+++...+......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... ..
T Consensus 135 v~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--~~ 212 (357)
T PHA03209 135 VLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA--PA 212 (357)
T ss_pred EEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC--cc
Confidence 9999999888877776778999999999999999999999999999999999999999999999999999754322 12
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCC-CCCCCCC---------hHHHHHHHHHHcCCCCchhhc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGK-PILQGRT---------EVEQLHKIFKLCGSPPDDYWK 358 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~-~pf~~~~---------~~~~~~~i~~~~g~~~~~~~~ 358 (478)
.....+|+.|+|||++.+ ..++.++|||||||++|||+++. ++|.... ....+..++..++..+..+..
T Consensus 213 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 291 (357)
T PHA03209 213 FLGLAGTVETNAPEVLAR-DKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPR 291 (357)
T ss_pred cccccccccccCCeecCC-CCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCC
Confidence 234568999999999886 67899999999999999999854 5554422 123455555656655544321
Q ss_pred cCCCCCc-cc----cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 359 KSKLPHA-TL----FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 359 ~~~~~~~-~~----~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
....... .+ .....++..........++.++.+||.+||+.||.+|||+.|+|+||||++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 292 DPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred CCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 1000000 00 000001110000011256788999999999999999999999999999975
No 87
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1e-45 Score=368.17 Aligned_cols=258 Identities=27% Similarity=0.407 Sum_probs=215.0
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCC-CCeeeecceeeecCCceEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDH-PNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~~~~~~~~~~l 208 (478)
+|++++.||+|+||.||+|++..+++.||||++..... .....+.+..|+.++..+.| ++|+++++++.. ...+|+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~~~~~l 78 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT--MDRLYF 78 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEc--CCEEEE
Confidence 48999999999999999999999999999999976432 23445667789999999965 568888888876 567999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||||++++.+.........+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ..
T Consensus 79 v~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~ 157 (324)
T cd05587 79 VMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG-KT 157 (324)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC-Cc
Confidence 99999987766665556678999999999999999999999999999999999999999999999999986432211 22
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF 368 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 368 (478)
....++|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.......
T Consensus 158 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~---------------- 220 (324)
T cd05587 158 TRTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSY---------------- 220 (324)
T ss_pred eeeecCCccccChhhhcC-CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC----------------
Confidence 334578999999999986 678999999999999999999999999888777776664321110
Q ss_pred CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCH-----HHHHhCcccCCCCC
Q 011763 369 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATA-----SAALASEYFSTKPY 421 (478)
Q Consensus 369 ~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta-----~e~L~hp~f~~~~~ 421 (478)
...++.++.+||.+||..||.+|++. .++++||||....+
T Consensus 221 -------------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~ 265 (324)
T cd05587 221 -------------PKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDW 265 (324)
T ss_pred -------------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 12578889999999999999999986 89999999987544
No 88
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=3.3e-46 Score=377.10 Aligned_cols=265 Identities=28% Similarity=0.421 Sum_probs=217.6
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
++|++++.||+|+||+||++++..+++.||||+++.... .......+.+|+.++..++|+||+++++.+.+ ...+||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~--~~~~~l 78 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQD--KRNLYL 78 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc--CCEEEE
Confidence 479999999999999999999999999999999975432 23445677889999999999999999999877 678999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC--
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-- 286 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~-- 286 (478)
||||++++.+..+......+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++........
T Consensus 79 v~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 79 IMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred EEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 999999877766665666899999999999999999999999999999999999999999999999999864422110
Q ss_pred --------------------------------CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCC
Q 011763 287 --------------------------------QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQ 334 (478)
Q Consensus 287 --------------------------------~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~ 334 (478)
......+||+.|+|||++.+ ..++.++|||||||++|||++|++||.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~~DiwSlGvilyel~tG~~Pf~ 237 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcC-CCCCCcceeccccceeeecccCCCCCC
Confidence 01123578999999999876 678999999999999999999999999
Q ss_pred CCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCcc---CHHHHH
Q 011763 335 GRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRA---TASAAL 411 (478)
Q Consensus 335 ~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~---ta~e~L 411 (478)
+.+..+...++........ +. ....+++++++||.+|+. ||.+|+ ++.+++
T Consensus 238 ~~~~~~~~~~i~~~~~~~~--------------------~p-----~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~ 291 (360)
T cd05627 238 SETPQETYRKVMNWKETLV--------------------FP-----PEVPISEKAKDLILRFCT-DSENRIGSNGVEEIK 291 (360)
T ss_pred CCCHHHHHHHHHcCCCcee--------------------cC-----CCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHh
Confidence 8887777666643110000 00 001468899999999874 999998 489999
Q ss_pred hCcccCCCCCCC
Q 011763 412 ASEYFSTKPYAC 423 (478)
Q Consensus 412 ~hp~f~~~~~~~ 423 (478)
+||||...+|..
T Consensus 292 ~hp~f~~~~~~~ 303 (360)
T cd05627 292 SHPFFEGVDWGH 303 (360)
T ss_pred cCCCCCCCCHHH
Confidence 999999876644
No 89
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.8e-45 Score=360.70 Aligned_cols=287 Identities=45% Similarity=0.776 Sum_probs=236.0
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|++.+.||.|+||.||+|.+..+++.||+|.++...........+.+|+.++.+++||||+++++++........|+
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 45799999999999999999999999999999999865544333445678999999999999999999987754478999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||||+.+++...+......+++..++.++.||+.||.|||+++|+|+||||+|||++.++.++|+|||++....... ..
T Consensus 84 v~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~~ 162 (293)
T cd07843 84 VMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL-KP 162 (293)
T ss_pred EehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc-cc
Confidence 99999987666665555579999999999999999999999999999999999999999999999999997655432 22
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCC-CCCccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK-LPHATL 367 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~-~~~~~~ 367 (478)
.....+++.|+|||++.+...++.++|||||||++|+|++|.+||...+..+.+.+++..++.+....|.... ++....
T Consensus 163 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (293)
T cd07843 163 YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKK 242 (293)
T ss_pred cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcc
Confidence 2334568889999998765567899999999999999999999999999999999999999998888776532 222111
Q ss_pred cCCCCCCCccchhcccC--CchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 368 FKPQQPYDSSLRETFKD--LPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~--~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
..........+...++. +++.+.+||.+||+.||++|||+.|+|.||||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 243 KTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred cccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 11111122233444544 48889999999999999999999999999998
No 90
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.3e-45 Score=367.29 Aligned_cols=256 Identities=25% Similarity=0.376 Sum_probs=212.6
Q ss_pred eeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHH---HhcCCCCeeeecceeeecCCceEE
Q 011763 132 FEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILIL---RRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 132 y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l---~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
|++++.||+|+||.||++.+..+++.||||+++.... .....+.+.+|+.++ +.++||||+++++++.. ...+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~--~~~~~ 78 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT--EDHVC 78 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc--CCEEE
Confidence 7889999999999999999999999999999975432 223345566676665 45689999999999987 67899
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
+||||++++.+...... ..+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... .
T Consensus 79 lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~-~ 156 (324)
T cd05589 79 FVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG-D 156 (324)
T ss_pred EEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC-C
Confidence 99999998766655543 479999999999999999999999999999999999999999999999999986533221 2
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccc
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATL 367 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 367 (478)
.....++++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.......
T Consensus 157 ~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~--------------- 220 (324)
T cd05589 157 RTSTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRY--------------- 220 (324)
T ss_pred cccccccCccccCHhHhcC-CCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC---------------
Confidence 2244678999999999876 678999999999999999999999999988877776664421110
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCcc-----CHHHHHhCcccCCCCC
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRA-----TASAALASEYFSTKPY 421 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~-----ta~e~L~hp~f~~~~~ 421 (478)
...++..+.+||.+||+.||.+|| ++.++++||||+...+
T Consensus 221 --------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~ 265 (324)
T cd05589 221 --------------PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINW 265 (324)
T ss_pred --------------CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCH
Confidence 125788899999999999999999 7999999999987544
No 91
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-46 Score=363.91 Aligned_cols=319 Identities=24% Similarity=0.371 Sum_probs=252.7
Q ss_pred ccccchhhhhc-CcchhhhhcccccccCcccccccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHH-HH
Q 011763 97 HKYIEGEQVAA-GWPAWLSAVAGEAIQGWVPLRADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPES-VR 174 (478)
Q Consensus 97 ~~~~~~e~~~~-~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~-~~ 174 (478)
+.++.++.+.. -...++.......+-.+.++..+.|...+.||+|+||.||-|+.+.||+.||.|.+.+..+.... ..
T Consensus 151 ~~~L~~~pF~~f~~S~yf~rFlQWK~lE~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~ 230 (591)
T KOG0986|consen 151 CAYLRGDPFQEFLESDYFTRFLQWKWLELQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGET 230 (591)
T ss_pred HHHhccchHhHhHHHHHHHHHHHHHHHHhhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhH
Confidence 44444444432 11223333344455556778899999999999999999999999999999999998766543332 33
Q ss_pred HHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeeccCCchhhccCCCC--CCCHHHHHHHHHHHHHHHHHHHhCCc
Q 011763 175 FMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHDITGLLSCPDI--KFSEAQIKCYMNQLLHGLEHCHSRGV 252 (478)
Q Consensus 175 ~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~--~l~~~~~~~i~~qil~aL~~LH~~gi 252 (478)
..++|-.||.+++.++||.+-..|+. .+.+||||..|+|+.+..++.+.+ .|++..+..|+.+|+.||++||+.+|
T Consensus 231 maLnEk~iL~kV~s~FiVslaYAfeT--kd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~i 308 (591)
T KOG0986|consen 231 MALNEKQILEKVSSPFIVSLAYAFET--KDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRI 308 (591)
T ss_pred HhhHHHHHHHHhccCcEEEEeeeecC--CCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcce
Confidence 45689999999999999999777766 778999999999988877766554 69999999999999999999999999
Q ss_pred eeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCC
Q 011763 253 LHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPI 332 (478)
Q Consensus 253 vHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~p 332 (478)
|+|||||+|||||+.|+++|+|+|+|..+..+ .+...++||.+|||||++.+ ..|+...|+|+|||+||||+.|+.|
T Consensus 309 VYRDLKPeNILLDd~GhvRISDLGLAvei~~g--~~~~~rvGT~GYMAPEvl~n-e~Y~~s~Dwf~lGCllYemi~G~sP 385 (591)
T KOG0986|consen 309 VYRDLKPENILLDDHGHVRISDLGLAVEIPEG--KPIRGRVGTVGYMAPEVLQN-EVYDFSPDWFSLGCLLYEMIAGHSP 385 (591)
T ss_pred eeccCChhheeeccCCCeEeeccceEEecCCC--CccccccCcccccCHHHHcC-CcccCCccHHHHHhHHHHHHcccCc
Confidence 99999999999999999999999999887765 44566799999999999987 5599999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccC-----H
Q 011763 333 LQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT-----A 407 (478)
Q Consensus 333 f~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t-----a 407 (478)
|....+....+.+-+..-..+. +....+++++++|.+.+|+.||.+|.- +
T Consensus 386 Fr~~KeKvk~eEvdrr~~~~~~-------------------------ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga 440 (591)
T KOG0986|consen 386 FRQRKEKVKREEVDRRTLEDPE-------------------------EYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGA 440 (591)
T ss_pred hhhhhhhhhHHHHHHHHhcchh-------------------------hcccccCHHHHHHHHHHHccCHHHhccCCCcCc
Confidence 9876554444333332222221 112478999999999999999999974 6
Q ss_pred HHHHhCcccCCCCCCCCCC---CCCCCCCChhhhhhhhHHH
Q 011763 408 SAALASEYFSTKPYACDLS---SLPIYPPSKEIDAKHREDA 445 (478)
Q Consensus 408 ~e~L~hp~f~~~~~~~~~~---~~p~~~~~~~~~~~~~~~~ 445 (478)
.++-+||||+..+|..... ..|..|+..++.++.--+.
T Consensus 441 ~evk~HpfFk~lnw~rleagml~PPfiPdp~aVyakDv~DI 481 (591)
T KOG0986|consen 441 QEVKEHPFFKDLNWRRLEAGMLEPPFIPDPGAVYAKDVLDI 481 (591)
T ss_pred chhhhCcccccCCHhHHhccCCCCCCCCCccccchhhhhhh
Confidence 7999999999988755333 3466677777766655444
No 92
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=6.6e-46 Score=368.86 Aligned_cols=253 Identities=25% Similarity=0.413 Sum_probs=211.9
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCceEEEEEeec
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSCSIYLVFEYM 213 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~lv~e~~ 213 (478)
+.||+|+||+||+|++..+++.||+|++..... .......+..|+.++..+ +||||+++++++.. ...+|+||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~--~~~~~iv~Ey~ 78 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQT--PDRLFFVMEFV 78 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEc--CCEEEEEEcCC
Confidence 469999999999999999999999999975432 233455667788888877 79999999999877 67899999999
Q ss_pred cCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccc
Q 011763 214 EHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRV 293 (478)
Q Consensus 214 ~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 293 (478)
+++.+.........+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... .......
T Consensus 79 ~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-~~~~~~~ 157 (320)
T cd05590 79 NGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-KTTSTFC 157 (320)
T ss_pred CCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-Ccccccc
Confidence 987766665556689999999999999999999999999999999999999999999999999987543221 2233457
Q ss_pred cCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCC
Q 011763 294 VTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQP 373 (478)
Q Consensus 294 ~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 373 (478)
+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.......
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~--------------------- 215 (320)
T cd05590 158 GTPDYIAPEILQE-MLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY--------------------- 215 (320)
T ss_pred cCccccCHHHHcC-CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCC---------------------
Confidence 8999999999876 678999999999999999999999999988877777664321110
Q ss_pred CCccchhcccCCchhHHHHHHHhcCCCCCCccCH------HHHHhCcccCCCCC
Q 011763 374 YDSSLRETFKDLPTTAVNLIETLLSVEPYKRATA------SAALASEYFSTKPY 421 (478)
Q Consensus 374 ~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta------~e~L~hp~f~~~~~ 421 (478)
...++.++.+||.+||+.||.+|+++ .+++.||||+...+
T Consensus 216 --------~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~ 261 (320)
T cd05590 216 --------PTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDW 261 (320)
T ss_pred --------CCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCH
Confidence 12467889999999999999999998 99999999987554
No 93
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.3e-45 Score=371.82 Aligned_cols=281 Identities=23% Similarity=0.307 Sum_probs=218.6
Q ss_pred ccceeeeeeeeecCceEEEEEEEC--CCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDL--DTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSI 206 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~--~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 206 (478)
..+|++++.||+|+||.||+|... .++..||+|.+.... ...+|+.+|+.++||||+++++++.. ...+
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~-------~~~~E~~il~~l~h~~iv~~~~~~~~--~~~~ 161 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK-------TPGREIDILKTISHRAIINLIHAYRW--KSTV 161 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc-------cHHHHHHHHHhcCCCCccceeeeEee--CCEE
Confidence 447999999999999999999754 356789999886431 24579999999999999999999877 6789
Q ss_pred EEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 207 YLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 207 ~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
|+|||++.+++...+ .....+++..++.++.||+.||.|||++||+||||||+||||+.++.++|+|||++........
T Consensus 162 ~lv~e~~~~~l~~~l-~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~ 240 (392)
T PHA03207 162 CMVMPKYKCDLFTYV-DRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD 240 (392)
T ss_pred EEEehhcCCCHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccc
Confidence 999999998877766 4455799999999999999999999999999999999999999999999999999976543222
Q ss_pred C-CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHcCCCCchhhccCCC
Q 011763 287 Q-PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRT---EVEQLHKIFKLCGSPPDDYWKKSKL 362 (478)
Q Consensus 287 ~-~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~---~~~~~~~i~~~~g~~~~~~~~~~~~ 362 (478)
. ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.. ....+..+.+.++..+.++......
T Consensus 241 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~ 319 (392)
T PHA03207 241 TPQCYGWSGTLETNSPELLAL-DPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGST 319 (392)
T ss_pred cccccccccccCccCHhHhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccch
Confidence 1 2234568999999999876 678999999999999999999999997654 4566777777777665443221110
Q ss_pred CC------c-cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCCC
Q 011763 363 PH------A-TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYA 422 (478)
Q Consensus 363 ~~------~-~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~~ 422 (478)
.. . ....+.......+. -..++.++.+||.+||.+||++|||+.++|.||||.+.|+.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~~ 384 (392)
T PHA03207 320 NLCKHFKQYAIVLRPPYTIPPVIR--KYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPIN 384 (392)
T ss_pred hHHHHHHhhcccccCCccccchhh--ccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccchh
Confidence 00 0 00000000001110 12457789999999999999999999999999999876543
No 94
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=4.9e-45 Score=360.02 Aligned_cols=288 Identities=45% Similarity=0.834 Sum_probs=235.3
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecC------
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRL------ 202 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------ 202 (478)
.++|++.++||.|+||.||++++..+++.||+|++............+.+|+++++.++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 56899999999999999999999999999999998765433333345668999999999999999999875432
Q ss_pred CceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccC
Q 011763 203 SCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSN 282 (478)
Q Consensus 203 ~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~ 282 (478)
...+|+||||+.+++...+......+++..++.++.||+.||.|||++||+|+||||+|||+++++.++|+|||++....
T Consensus 87 ~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 166 (311)
T cd07866 87 RGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYD 166 (311)
T ss_pred CceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhcc
Confidence 23579999999988877776666689999999999999999999999999999999999999999999999999997543
Q ss_pred CCCC----------CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCC
Q 011763 283 TGHR----------QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSP 352 (478)
Q Consensus 283 ~~~~----------~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~ 352 (478)
.... .......+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+.....+.+....+.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 246 (311)
T cd07866 167 GPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTP 246 (311)
T ss_pred CCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 3211 112234568889999988765668999999999999999999999999999999999999988888
Q ss_pred CchhhccCCC-CCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 353 PDDYWKKSKL-PHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 353 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
++..|..+.. +..............+...+..+.+.+.+||.+||..||.+|||+.++|.||||
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 247 TEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred ChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 7776654332 111111112223334555566778899999999999999999999999999998
No 95
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=6.5e-45 Score=366.65 Aligned_cols=287 Identities=30% Similarity=0.538 Sum_probs=229.6
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecC----Cc
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRL----SC 204 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----~~ 204 (478)
.++|++++.||+|+||.||++.+..+++.||+|++............+.+|+.++++++|+||++++++|.... ..
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 94 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ 94 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence 46899999999999999999999999999999998755444555566778999999999999999999886432 23
Q ss_pred eEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 205 SIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
..|+||||+.+++...+... +++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 95 ~~~lv~e~~~~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 171 (353)
T cd07850 95 DVYLVMELMDANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 171 (353)
T ss_pred cEEEEEeccCCCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCC
Confidence 57999999998776665432 889999999999999999999999999999999999999999999999999765432
Q ss_pred CCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 285 HRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 285 ~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
. ......+++.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+....+...++.++.+++.......
T Consensus 172 ~--~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (353)
T cd07850 172 F--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTV 248 (353)
T ss_pred C--CCCCCcccccccCHHHHhC-CCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhh
Confidence 2 2233467889999999876 678999999999999999999999999999899999999999998877654422110
Q ss_pred ccccC--------------CCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCC
Q 011763 365 ATLFK--------------PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPY 421 (478)
Q Consensus 365 ~~~~~--------------~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~ 421 (478)
..... +...+...........++.+.+||.+||+.||++|||+.|+|.||||+.+-.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~ 319 (353)
T cd07850 249 RNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYD 319 (353)
T ss_pred hHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccC
Confidence 00000 0000000000111235677899999999999999999999999999986543
No 96
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=3.9e-46 Score=371.30 Aligned_cols=253 Identities=24% Similarity=0.391 Sum_probs=210.8
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeecc
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYME 214 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~ 214 (478)
+.||+|+||.||++++..+++.||+|++..... .......+.+|++++..++||||+++++++.. ...+||||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~--~~~~~lv~E~~~ 78 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT--HDRLCFVMEYAN 78 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEc--CCEEEEEEeCCC
Confidence 469999999999999999999999999976432 23344566789999999999999999998877 678999999999
Q ss_pred CCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccc
Q 011763 215 HDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRV 293 (478)
Q Consensus 215 ~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 293 (478)
++.+.........+++..++.++.||+.||.|||+ +||+||||||+||||+.++.+||+|||++....... .......
T Consensus 79 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~ 157 (325)
T cd05594 79 GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-ATMKTFC 157 (325)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-ccccccc
Confidence 87776666666689999999999999999999997 799999999999999999999999999987533221 2223456
Q ss_pred cCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCC
Q 011763 294 VTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQP 373 (478)
Q Consensus 294 ~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 373 (478)
+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+....+......
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~---------------------- 214 (325)
T cd05594 158 GTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR---------------------- 214 (325)
T ss_pred CCcccCCHHHHcc-CCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCC----------------------
Confidence 8999999999876 67899999999999999999999999887766655554321100
Q ss_pred CCccchhcccCCchhHHHHHHHhcCCCCCCcc-----CHHHHHhCcccCCCCC
Q 011763 374 YDSSLRETFKDLPTTAVNLIETLLSVEPYKRA-----TASAALASEYFSTKPY 421 (478)
Q Consensus 374 ~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~-----ta~e~L~hp~f~~~~~ 421 (478)
....+++++.+||.+||+.||.+|+ ++.++|+||||....+
T Consensus 215 -------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~ 260 (325)
T cd05594 215 -------FPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVW 260 (325)
T ss_pred -------CCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCH
Confidence 0124688999999999999999997 9999999999987543
No 97
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.8e-45 Score=366.16 Aligned_cols=258 Identities=25% Similarity=0.373 Sum_probs=215.6
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCceEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~l 208 (478)
+|++++.||+|+||.||+|++..+++.||+|++..... .......+..|..++..+ +|++|+++++++.. ...+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~~~~~l 78 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQT--MDRLYF 78 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEec--CCEEEE
Confidence 48999999999999999999999999999999986532 223344566788888877 68999999998877 678999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||||++++.+.........+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ..
T Consensus 79 v~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~-~~ 157 (323)
T cd05616 79 VMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG-VT 157 (323)
T ss_pred EEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC-Cc
Confidence 99999987666555555679999999999999999999999999999999999999999999999999987543211 22
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF 368 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 368 (478)
.....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.......
T Consensus 158 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~---------------- 220 (323)
T cd05616 158 TKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY---------------- 220 (323)
T ss_pred cccCCCChhhcCHHHhcC-CCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC----------------
Confidence 334578999999999886 678999999999999999999999999988877777765422111
Q ss_pred CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccC-----HHHHHhCcccCCCCC
Q 011763 369 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT-----ASAALASEYFSTKPY 421 (478)
Q Consensus 369 ~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t-----a~e~L~hp~f~~~~~ 421 (478)
...++.++.+||.+||+.||.+|++ ..++++||||....|
T Consensus 221 -------------p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~ 265 (323)
T cd05616 221 -------------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDW 265 (323)
T ss_pred -------------CCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCH
Confidence 1257889999999999999999998 489999999987654
No 98
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.9e-45 Score=367.35 Aligned_cols=268 Identities=25% Similarity=0.351 Sum_probs=215.7
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCC-CChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDN-FEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
++|++++.||+|+||+||++++..+++.||+|++.... ........+.+|+.++..++|+||+++++++.. ..++|+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~l 78 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQD--ENNLYL 78 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEec--CCeEEE
Confidence 47999999999999999999999999999999997532 223344567789999999999999999999887 678999
Q ss_pred EEeeccCCchhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 209 VFEYMEHDITGLLS-CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 209 v~e~~~~~ll~~~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
||||+.++.+..+. .....+++..++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||++.........
T Consensus 79 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 158 (331)
T cd05597 79 VMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTV 158 (331)
T ss_pred EEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCc
Confidence 99999876555443 33557999999999999999999999999999999999999999999999999998765433322
Q ss_pred CccccccCCcccCcccccC----CCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCC
Q 011763 288 PLTSRVVTLWYRPPELLLG----ATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP 363 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~----~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 363 (478)
......+|+.|+|||++.. ...++.++|||||||++|+|++|+.||...+..+....+.......+
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~---------- 228 (331)
T cd05597 159 QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQ---------- 228 (331)
T ss_pred cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCccc----------
Confidence 2233468999999999863 24578899999999999999999999998877776666543211000
Q ss_pred CccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCC--ccCHHHHHhCcccCCCCCCC
Q 011763 364 HATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYK--RATASAALASEYFSTKPYAC 423 (478)
Q Consensus 364 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~--R~ta~e~L~hp~f~~~~~~~ 423 (478)
+......+++.+++||++||..++.+ |+++.++|+||||....+..
T Consensus 229 --------------~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~~~~~ 276 (331)
T cd05597 229 --------------FPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGIDWDN 276 (331)
T ss_pred --------------CCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCCCHHH
Confidence 00111347889999999999765554 78999999999998765543
No 99
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3.8e-45 Score=362.33 Aligned_cols=277 Identities=36% Similarity=0.660 Sum_probs=213.7
Q ss_pred eeeeecCceEEEEEEECC--CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeec
Q 011763 136 EKIGQGTYSSVFRARDLD--TGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYM 213 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~--~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~ 213 (478)
.+||+|+||+||+|++.. ++..||+|.+..... ...+.+|+.+|+.++||||+++++++.......+|+||||+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYA 82 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeee
Confidence 689999999999998653 568899999875432 23466899999999999999999998765567899999999
Q ss_pred cCCchhhccC--------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEE----ecCCcEEEeeccccccc
Q 011763 214 EHDITGLLSC--------PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLV----NNEGVLKLADFGLANFS 281 (478)
Q Consensus 214 ~~~ll~~~~~--------~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl----~~~~~vkl~DFG~a~~~ 281 (478)
++++...+.. ....+++..++.++.||+.||.|||+++|+||||||+|||+ +.++.+||+|||+++..
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07867 83 EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred CCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceecc
Confidence 9877655431 22358999999999999999999999999999999999999 45678999999999865
Q ss_pred CCCCC--CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCh---------HHHHHHHHHHcC
Q 011763 282 NTGHR--QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTE---------VEQLHKIFKLCG 350 (478)
Q Consensus 282 ~~~~~--~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~---------~~~~~~i~~~~g 350 (478)
..... .......+|+.|+|||++.+...++.++|||||||++|||++|++||....+ ..++.++...++
T Consensus 163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T cd07867 163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMG 242 (317)
T ss_pred CCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcC
Confidence 43221 1223456799999999987756789999999999999999999999976432 356778888889
Q ss_pred CCCchhhccCCCCCc----c-ccCCCCCCCcc----chhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 351 SPPDDYWKKSKLPHA----T-LFKPQQPYDSS----LRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 351 ~~~~~~~~~~~~~~~----~-~~~~~~~~~~~----l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
.+....|........ . .+......... +.......+..+.+||.+||..||.+|||+.|+|+||||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 243 FPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred CCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 888887765321100 0 00000000001 111112345678999999999999999999999999998
No 100
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=6.9e-45 Score=357.80 Aligned_cols=288 Identities=49% Similarity=0.876 Sum_probs=235.7
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecC------
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRL------ 202 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------ 202 (478)
.++|++.+.||+|+||.||+|.+..+++.||+|+++...........+.+|+.+++.++||||+++++++.+..
T Consensus 6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~ 85 (302)
T cd07864 6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFK 85 (302)
T ss_pred hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhcc
Confidence 56899999999999999999999999999999999765433334456678999999999999999999886532
Q ss_pred --CceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccc
Q 011763 203 --SCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANF 280 (478)
Q Consensus 203 --~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~ 280 (478)
...+|+|+||+++++...+......+++..++.++.||+.||.|||++||+|+||||+||++++++.+||+|||++..
T Consensus 86 ~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~ 165 (302)
T cd07864 86 KDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARL 165 (302)
T ss_pred ccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccccccc
Confidence 237899999999987777766556799999999999999999999999999999999999999999999999999976
Q ss_pred cCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccC
Q 011763 281 SNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKS 360 (478)
Q Consensus 281 ~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 360 (478)
..............+..|+|||++.+...++.++|||||||++|+|++|++||...+..+.+..+...++.++...|...
T Consensus 166 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (302)
T cd07864 166 YNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDV 245 (302)
T ss_pred ccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccc
Confidence 65433223333455788999998876556789999999999999999999999999999999999998888887766543
Q ss_pred CC-CCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 361 KL-PHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 361 ~~-~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
.. +..............+...+..++..+.+||.+||..||.+|||+.++|.||||
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 246 IKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred cccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 21 111111111112223444556789999999999999999999999999999997
No 101
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.2e-44 Score=353.08 Aligned_cols=283 Identities=36% Similarity=0.651 Sum_probs=227.3
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
++|++.+.||+|+||.||++.+..+++.||+|++..........+.+.+|+.+++.++|+||+++++++.. ....++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~~v 78 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRR--KRKLHLV 78 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEee--CCEEEEE
Confidence 47999999999999999999999899999999987554333334567789999999999999999999987 6789999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL 289 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 289 (478)
|||++++++..+......+++..++.++.||+.+|.|||+++|+|+||||+||+++.++.++|+|||++........ ..
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-~~ 157 (286)
T cd07847 79 FEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD-DY 157 (286)
T ss_pred EeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcc-cc
Confidence 99999988887766666799999999999999999999999999999999999999999999999999976544321 12
Q ss_pred cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchh---hccCCCCCcc
Q 011763 290 TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDY---WKKSKLPHAT 366 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~---~~~~~~~~~~ 366 (478)
....++..|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+...++...... +....... .
T Consensus 158 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 236 (286)
T cd07847 158 TDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFK-G 236 (286)
T ss_pred cCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccc-c
Confidence 2345688899999987656688999999999999999999999999888777777766555443321 11100000 0
Q ss_pred ccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 367 LFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 367 ~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
...+.......+...++.++..+.+||.+||..||++|||+.|+|.||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 237 LSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred ccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 01111111122344456789999999999999999999999999999998
No 102
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=9.7e-45 Score=355.01 Aligned_cols=284 Identities=37% Similarity=0.685 Sum_probs=227.3
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|++.+.||.|+||.||++.+..+++.||||.+...... .....+.+|+.+++.++|+||+++++++.. ....|+
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~l 80 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE-GAPFTAIREASLLKDLKHANIVTLHDIIHT--KKTLTL 80 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc-CCchhHHHHHHHHhhCCCcceeeEEEEEec--CCeEEE
Confidence 56899999999999999999999989999999998754322 122345679999999999999999999876 678999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||||+.+++...+......+++..++.++.||+.||.|||+++|+|+||||+|||++.++.+||+|||++....... ..
T Consensus 81 v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-~~ 159 (291)
T cd07844 81 VFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS-KT 159 (291)
T ss_pred EEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCC-cc
Confidence 99999987776666555578999999999999999999999999999999999999999999999999986543221 11
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHcCCCCchhhccCCCCCccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRT-EVEQLHKIFKLCGSPPDDYWKKSKLPHATL 367 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~-~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 367 (478)
.....++..|+|||++.+...++.++|||||||++|+|++|++||.... ..+.+..+.+.++.+....|..........
T Consensus 160 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (291)
T cd07844 160 YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFK 239 (291)
T ss_pred ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccc
Confidence 2223457889999998765668899999999999999999999998766 567778888888888877775533211100
Q ss_pred -cCCCCCCCccchhcccCCc--hhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 368 -FKPQQPYDSSLRETFKDLP--TTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 368 -~~~~~~~~~~l~~~~~~~~--~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
..........+...+..++ .++.+||.+||+.||++|||+.++|.||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 240 PYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred cccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 0000011122333334455 889999999999999999999999999998
No 103
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.5e-45 Score=371.97 Aligned_cols=267 Identities=27% Similarity=0.369 Sum_probs=217.9
Q ss_pred ccccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCce
Q 011763 127 LRADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCS 205 (478)
Q Consensus 127 ~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 205 (478)
+..++|++.+.||+|+||.||++++..+++.||+|++..... .......+.+|+.+++.++||||+++++++.. ...
T Consensus 40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~--~~~ 117 (371)
T cd05622 40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD--DRY 117 (371)
T ss_pred cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc--CCE
Confidence 346799999999999999999999999999999999875322 22334557789999999999999999999877 678
Q ss_pred EEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC
Q 011763 206 IYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH 285 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~ 285 (478)
+|+||||++++.+..+... ..+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++.......
T Consensus 118 ~~lv~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~ 196 (371)
T cd05622 118 LYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 196 (371)
T ss_pred EEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCC
Confidence 9999999998766655543 358999999999999999999999999999999999999999999999999997664332
Q ss_pred CCCccccccCCcccCcccccCC---CCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCC
Q 011763 286 RQPLTSRVVTLWYRPPELLLGA---TDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL 362 (478)
Q Consensus 286 ~~~~~~~~~t~~y~APE~l~~~---~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 362 (478)
.......++|+.|+|||++.+. ..++.++|||||||++|+|++|.+||.+.+......++.......+.
T Consensus 197 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~-------- 268 (371)
T cd05622 197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTF-------- 268 (371)
T ss_pred cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccC--------
Confidence 2233456789999999998652 23788999999999999999999999998887777776542211100
Q ss_pred CCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCC--ccCHHHHHhCcccCCCCC
Q 011763 363 PHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYK--RATASAALASEYFSTKPY 421 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~--R~ta~e~L~hp~f~~~~~ 421 (478)
.....++..+++||..||..++.+ |+++.++++|+||++.++
T Consensus 269 -----------------~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~~~ 312 (371)
T cd05622 269 -----------------PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQW 312 (371)
T ss_pred -----------------CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCCCh
Confidence 001367889999999999844433 789999999999988654
No 104
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-47 Score=399.10 Aligned_cols=277 Identities=28% Similarity=0.374 Sum_probs=238.5
Q ss_pred ccccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCce
Q 011763 127 LRADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCS 205 (478)
Q Consensus 127 ~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 205 (478)
+..++|++++.||+|+||.|.+++++.+++.||+|++++-.+ .......|+.|-.+|-.-+.+-|++++-.|++ ..+
T Consensus 72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD--~~~ 149 (1317)
T KOG0612|consen 72 LKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD--ERY 149 (1317)
T ss_pred CCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC--ccc
Confidence 456899999999999999999999999999999999976433 24445678889999999999999999999988 789
Q ss_pred EEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC
Q 011763 206 IYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH 285 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~ 285 (478)
+||||||++||.+-.+...-.++++..+++|+..|+.||+-||+.|+|||||||+|||||..|++||+|||.|.......
T Consensus 150 LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG 229 (1317)
T KOG0612|consen 150 LYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADG 229 (1317)
T ss_pred eEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCC
Confidence 99999999986554444444489999999999999999999999999999999999999999999999999998777666
Q ss_pred CCCccccccCCcccCcccccC----CCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH--cCCCCchhhcc
Q 011763 286 RQPLTSRVVTLWYRPPELLLG----ATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKL--CGSPPDDYWKK 359 (478)
Q Consensus 286 ~~~~~~~~~t~~y~APE~l~~----~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~--~g~~~~~~~~~ 359 (478)
.......+|||.|++||+|.. .+.|+..+|+|||||++|||+.|..||..++..+++-+|+.. ....|+.
T Consensus 230 ~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~---- 305 (1317)
T KOG0612|consen 230 TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDE---- 305 (1317)
T ss_pred cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcc----
Confidence 666677899999999999852 257999999999999999999999999999999999999875 2122211
Q ss_pred CCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccC---HHHHHhCcccCCCCCCCCCCCCCCCCC
Q 011763 360 SKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT---ASAALASEYFSTKPYACDLSSLPIYPP 433 (478)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t---a~e~L~hp~f~~~~~~~~~~~~p~~~~ 433 (478)
.++|+++++||+++|. +|+.|.. ++++-.||||.+.+|..-....|++-|
T Consensus 306 -----------------------~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~iR~~~pP~vP 358 (1317)
T KOG0612|consen 306 -----------------------TDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDNIRESVPPVVP 358 (1317)
T ss_pred -----------------------cccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChhhhhhcCCCCCC
Confidence 2589999999999987 7999998 999999999999999666555555544
No 105
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=4.1e-45 Score=363.65 Aligned_cols=254 Identities=28% Similarity=0.459 Sum_probs=210.5
Q ss_pred eeeeeecCceEEEEEEEC---CCCcEEEEEEeecCCC--ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 135 LEKIGQGTYSSVFRARDL---DTGKIVALKKVRFDNF--EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 135 ~~~LG~G~~g~V~~~~~~---~~~~~vAlK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
++.||+|+||.||++++. .+++.||+|++..... .......+.+|+.+|+.++||||++++++|.. ...+|+|
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~--~~~~~lv 78 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQT--GGKLYLI 78 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEec--CCeEEEE
Confidence 368999999999999863 4788999999975432 12333456789999999999999999999877 6789999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL 289 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 289 (478)
|||+.++.+.........+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+++...... ...
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~ 157 (323)
T cd05584 79 LEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG-TVT 157 (323)
T ss_pred EeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC-Ccc
Confidence 9999987776666666678999999999999999999999999999999999999999999999999987543221 222
Q ss_pred cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccC
Q 011763 290 TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFK 369 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 369 (478)
....+|+.|+|||++.+ ..++.++|||||||++|||++|++||...+....+..+......
T Consensus 158 ~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~------------------ 218 (323)
T cd05584 158 HTFCGTIEYMAPEILMR-SGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLN------------------ 218 (323)
T ss_pred cccCCCccccChhhccC-CCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC------------------
Confidence 34568999999999876 66889999999999999999999999988877766665432110
Q ss_pred CCCCCCccchhcccCCchhHHHHHHHhcCCCCCCcc-----CHHHHHhCcccCCCCC
Q 011763 370 PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRA-----TASAALASEYFSTKPY 421 (478)
Q Consensus 370 ~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~-----ta~e~L~hp~f~~~~~ 421 (478)
....+++.+.+||.+||+.||++|| ++.+++.||||....+
T Consensus 219 -----------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~ 264 (323)
T cd05584 219 -----------LPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNW 264 (323)
T ss_pred -----------CCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 1135678899999999999999999 8999999999986543
No 106
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.3e-45 Score=366.99 Aligned_cols=253 Identities=26% Similarity=0.395 Sum_probs=211.9
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCceEEEEEeec
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSCSIYLVFEYM 213 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~lv~e~~ 213 (478)
+.||+|+||.||+|++..+++.||+|++..+.. .......+..|+.++..+ +||||+++++++.. ...+||||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~--~~~~~lv~E~~ 78 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQT--KDRLFFVMEYV 78 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc--CCeEEEEEeCC
Confidence 468999999999999999999999999976432 233445567799999876 89999999999987 67799999999
Q ss_pred cCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccc
Q 011763 214 EHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRV 293 (478)
Q Consensus 214 ~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 293 (478)
+++.+.........+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... .......
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~ 157 (321)
T cd05591 79 NGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-VTTTTFC 157 (321)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCC-ccccccc
Confidence 987666555555679999999999999999999999999999999999999999999999999987543221 2233456
Q ss_pred cCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCC
Q 011763 294 VTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQP 373 (478)
Q Consensus 294 ~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 373 (478)
+|+.|+|||++.+ ..++.++|||||||++|+|++|++||...+..+.+..+.......
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~--------------------- 215 (321)
T cd05591 158 GTPDYIAPEILQE-LEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLY--------------------- 215 (321)
T ss_pred cCccccCHHHHcC-CCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC---------------------
Confidence 8999999999876 678999999999999999999999999998888777765421100
Q ss_pred CCccchhcccCCchhHHHHHHHhcCCCCCCcc-------CHHHHHhCcccCCCCC
Q 011763 374 YDSSLRETFKDLPTTAVNLIETLLSVEPYKRA-------TASAALASEYFSTKPY 421 (478)
Q Consensus 374 ~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~-------ta~e~L~hp~f~~~~~ 421 (478)
...++.++.+||.+||+.||.+|+ ++.++++||||....|
T Consensus 216 --------p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~ 262 (321)
T cd05591 216 --------PVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDW 262 (321)
T ss_pred --------CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCH
Confidence 023678899999999999999999 9999999999987544
No 107
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=9.3e-45 Score=353.01 Aligned_cols=281 Identities=37% Similarity=0.631 Sum_probs=227.5
Q ss_pred eeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcC-CCCeeeecceeeecCCceEEEEE
Q 011763 132 FEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLD-HPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 132 y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
|++++.||+|+||.||++.+..+++.||+|+++......... ...+|+.++.++. |+||+++++++.+.....+++||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~-~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQV-NNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhh-hHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence 678999999999999999999999999999987543332322 3346899999884 99999999999875447899999
Q ss_pred eeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCcc
Q 011763 211 EYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLT 290 (478)
Q Consensus 211 e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~ 290 (478)
||++++++..+......+++..++.++.||+.||.|||+++++|+||+|+||+++. +.+||+|||++...... ....
T Consensus 80 e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~--~~~~ 156 (282)
T cd07831 80 ELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSK--PPYT 156 (282)
T ss_pred ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccC--CCcC
Confidence 99998888777665567999999999999999999999999999999999999999 99999999999765432 2223
Q ss_pred ccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCC
Q 011763 291 SRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKP 370 (478)
Q Consensus 291 ~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 370 (478)
...++..|+|||++.....++.++|||||||++|+|++|.+||.+.+..+.+..+...++.++..++..........+..
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd07831 157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNF 236 (282)
T ss_pred CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccC
Confidence 34568899999987655667889999999999999999999999999999999998888888776543322111111111
Q ss_pred CCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 371 QQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 371 ~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
.......+......++..+.+||.+||..||++|||+.++|+||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 1111222333345678999999999999999999999999999998
No 108
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=5e-45 Score=356.48 Aligned_cols=262 Identities=24% Similarity=0.382 Sum_probs=213.6
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCC-hHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFE-PESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
+|++.+.||+|+||+||++.+..+++.||+|++...... ......+.+|+.+++.++||||+++++.+.. ...+|+|
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 78 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET--KDALCLV 78 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecC--CCeEEEE
Confidence 489999999999999999999999999999999754332 2223456789999999999999999998877 5689999
Q ss_pred EeeccCCchhhcc-C-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 210 FEYMEHDITGLLS-C-PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 210 ~e~~~~~ll~~~~-~-~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
|||+.++.+..+. . ....+++..+..++.||+.||.|||+++|+|+||||+||++++++.++|+|||++...... .
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~--~ 156 (285)
T cd05605 79 LTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG--E 156 (285)
T ss_pred EeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC--C
Confidence 9999986665433 2 2346899999999999999999999999999999999999999999999999999765432 1
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccc
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATL 367 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 367 (478)
......+++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+.......+...+...+.
T Consensus 157 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~------------- 222 (285)
T cd05605 157 TIRGRVGTVGYMAPEVVKN-ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQE------------- 222 (285)
T ss_pred ccccccCCCCccCcHHhcC-CCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhccc-------------
Confidence 2234577999999999876 67899999999999999999999999987665444443332211110
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCcc-----CHHHHHhCcccCCCCCC
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRA-----TASAALASEYFSTKPYA 422 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~-----ta~e~L~hp~f~~~~~~ 422 (478)
.....++..+.+||.+||..||.+|| ++.++++||||....+.
T Consensus 223 ------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~ 270 (285)
T cd05605 223 ------------EYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFK 270 (285)
T ss_pred ------------ccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHH
Confidence 11135788899999999999999999 99999999999875554
No 109
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.8e-45 Score=363.67 Aligned_cols=253 Identities=26% Similarity=0.425 Sum_probs=208.0
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCceEEEEEeec
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSCSIYLVFEYM 213 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~lv~e~~ 213 (478)
+.||+|+||.||+|++..+++.||+|+++.+.. .....+.+..|..++..+ +||||+++++++.. ...+|+||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~--~~~~~lv~e~~ 78 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQT--KEHLFFVMEYL 78 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEc--CCEEEEEEcCC
Confidence 469999999999999999999999999976432 223344455677777654 89999999999877 67899999999
Q ss_pred cCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccc
Q 011763 214 EHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRV 293 (478)
Q Consensus 214 ~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 293 (478)
+++.+..+......+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||++....... ......+
T Consensus 79 ~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~~~~~~ 157 (316)
T cd05592 79 NGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKASTFC 157 (316)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Ccccccc
Confidence 987776665556679999999999999999999999999999999999999999999999999997543222 2234457
Q ss_pred cCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCC
Q 011763 294 VTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQP 373 (478)
Q Consensus 294 ~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 373 (478)
+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.......
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~--------------------- 215 (316)
T cd05592 158 GTPDYIAPEILKG-QKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHF--------------------- 215 (316)
T ss_pred CCccccCHHHHcC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC---------------------
Confidence 8999999999876 668999999999999999999999999988777666654311000
Q ss_pred CCccchhcccCCchhHHHHHHHhcCCCCCCccCH-HHHHhCcccCCCCC
Q 011763 374 YDSSLRETFKDLPTTAVNLIETLLSVEPYKRATA-SAALASEYFSTKPY 421 (478)
Q Consensus 374 ~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta-~e~L~hp~f~~~~~ 421 (478)
...++.++.+||.+||..||.+||++ .++++||||....+
T Consensus 216 --------~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~~ 256 (316)
T cd05592 216 --------PRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGIDW 256 (316)
T ss_pred --------CCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCCCH
Confidence 02467889999999999999999986 58889999987543
No 110
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=4.2e-45 Score=356.06 Aligned_cols=256 Identities=23% Similarity=0.337 Sum_probs=206.0
Q ss_pred eeecCceEEEEEEECCCCcEEEEEEeecCCCC-hHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeeccCC
Q 011763 138 IGQGTYSSVFRARDLDTGKIVALKKVRFDNFE-PESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHD 216 (478)
Q Consensus 138 LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~~~ 216 (478)
||+|+||+||++.+..+++.||+|++...... ....+.+..|+.+|+.++|+||+++++++.. ...+|+||||++++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~g 78 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQT--KTDLCLVMTIMNGG 78 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcC--CCeEEEEEeCCCCC
Confidence 68999999999999999999999999754432 2234566789999999999999999998876 56799999999987
Q ss_pred chhhcc----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCcccc
Q 011763 217 ITGLLS----CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSR 292 (478)
Q Consensus 217 ll~~~~----~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~ 292 (478)
.+.... .....+++..+..++.||+.||.|||+++|+||||||+|||++.++.++|+|||++........ .....
T Consensus 79 ~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~ 157 (280)
T cd05608 79 DLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTKGY 157 (280)
T ss_pred CHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-ccccc
Confidence 665332 2345689999999999999999999999999999999999999999999999999976543322 22345
Q ss_pred ccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCC
Q 011763 293 VVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQ 372 (478)
Q Consensus 293 ~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 372 (478)
.+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||...........+.......+.
T Consensus 158 ~g~~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~------------------ 218 (280)
T cd05608 158 AGTPGFMAPELLQG-EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSV------------------ 218 (280)
T ss_pred CCCcCccCHHHhcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCC------------------
Confidence 67999999999986 67899999999999999999999999876543222222221111000
Q ss_pred CCCccchhcccCCchhHHHHHHHhcCCCCCCcc-----CHHHHHhCcccCCCCCC
Q 011763 373 PYDSSLRETFKDLPTTAVNLIETLLSVEPYKRA-----TASAALASEYFSTKPYA 422 (478)
Q Consensus 373 ~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~-----ta~e~L~hp~f~~~~~~ 422 (478)
.....++..+.+||.+||+.||++|| |++++++||||+...+.
T Consensus 219 -------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~ 266 (280)
T cd05608 219 -------TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWR 266 (280)
T ss_pred -------CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHh
Confidence 01135788999999999999999999 89999999999876554
No 111
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.8e-44 Score=353.78 Aligned_cols=287 Identities=41% Similarity=0.734 Sum_probs=232.1
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
++|++.+.||.|++|+||++.+..+++.||+|++..........+.+.+|+.++++++||||+++++++.. ....|+|
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 79 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS--EKRLYLV 79 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEec--CCeEEEE
Confidence 57999999999999999999999899999999987654444444667789999999999999999999987 6789999
Q ss_pred EeeccCCchhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEec-CCcEEEeecccccccCCCCCC
Q 011763 210 FEYMEHDITGLLSCPD-IKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNN-EGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~-~~~vkl~DFG~a~~~~~~~~~ 287 (478)
|||+++++...+.... ..+++..++.++.||+.||.|||+++|+|+||+|+||+++. ++.+||+|||++....... .
T Consensus 80 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~-~ 158 (294)
T PLN00009 80 FEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV-R 158 (294)
T ss_pred EecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc-c
Confidence 9999887766654332 34688899999999999999999999999999999999985 4579999999997554321 2
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCC-CCCcc
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK-LPHAT 366 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~-~~~~~ 366 (478)
......+++.|+|||++.+...++.++|||||||++|+|++|++||...+..+.+.+++..++.+....|.... ++...
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (294)
T PLN00009 159 TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYK 238 (294)
T ss_pred ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhh
Confidence 22334568899999998765668899999999999999999999999998888899999999988888876422 22211
Q ss_pred ccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCC
Q 011763 367 LFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKP 420 (478)
Q Consensus 367 ~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~ 420 (478)
...+.. ....+....+.+++.+.++|.+||+.||++||++.++|+||||.+..
T Consensus 239 ~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 239 SAFPKW-PPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLG 291 (294)
T ss_pred hhcccC-CCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHh
Confidence 111110 11122233456889999999999999999999999999999998643
No 112
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=3.5e-45 Score=363.02 Aligned_cols=253 Identities=24% Similarity=0.387 Sum_probs=208.0
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCceEEEEEeec
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSCSIYLVFEYM 213 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~lv~e~~ 213 (478)
+.||+|+||.||+|++..+++.||+|+++.... .......+..|+.++..+ +||||+++++++.. ..++||||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~~~~~lv~E~~ 78 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQT--KEHLFFVMEFL 78 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEe--CCEEEEEECCC
Confidence 469999999999999999999999999976432 123344566788888765 89999999999987 67899999999
Q ss_pred cCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccc
Q 011763 214 EHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRV 293 (478)
Q Consensus 214 ~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 293 (478)
.++.+.........+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++....... .......
T Consensus 79 ~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~ 157 (316)
T cd05620 79 NGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD-NRASTFC 157 (316)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC-CceeccC
Confidence 987666555556679999999999999999999999999999999999999999999999999986432211 2234567
Q ss_pred cCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCC
Q 011763 294 VTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQP 373 (478)
Q Consensus 294 ~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 373 (478)
+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+....+.......
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~--------------------- 215 (316)
T cd05620 158 GTPDYIAPEILQG-LKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHY--------------------- 215 (316)
T ss_pred CCcCccCHHHHcC-CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC---------------------
Confidence 8999999999886 678999999999999999999999999888766665553211000
Q ss_pred CCccchhcccCCchhHHHHHHHhcCCCCCCccCH-HHHHhCcccCCCCC
Q 011763 374 YDSSLRETFKDLPTTAVNLIETLLSVEPYKRATA-SAALASEYFSTKPY 421 (478)
Q Consensus 374 ~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta-~e~L~hp~f~~~~~ 421 (478)
...++.++.+||.+||+.||.+|+++ +++++||||....+
T Consensus 216 --------~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~~ 256 (316)
T cd05620 216 --------PRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTINW 256 (316)
T ss_pred --------CCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCCH
Confidence 02367889999999999999999997 58889999987543
No 113
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.7e-44 Score=351.62 Aligned_cols=285 Identities=56% Similarity=1.009 Sum_probs=237.4
Q ss_pred eeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEe
Q 011763 132 FEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFE 211 (478)
Q Consensus 132 y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e 211 (478)
|++++.||.|+||.||++.+..+++.||+|++............+.+|+.+++.++|+||+++++++........++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 78899999999999999999989999999999866433444556778999999999999999999998743378999999
Q ss_pred eccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccc
Q 011763 212 YMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTS 291 (478)
Q Consensus 212 ~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 291 (478)
|+++++...+......+++..++.++.||+.||.|||++|++|+||+|+||++++++.++|+|||++.............
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 160 (287)
T cd07840 81 YMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTN 160 (287)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccc
Confidence 99987777766655689999999999999999999999999999999999999999999999999997665443222344
Q ss_pred cccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCC-CCccccCC
Q 011763 292 RVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL-PHATLFKP 370 (478)
Q Consensus 292 ~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~-~~~~~~~~ 370 (478)
..++..|+|||.+.+...++.++|||||||++|+|++|+.||...+....+..+...++.++...|..... .......+
T Consensus 161 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (287)
T cd07840 161 RVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKP 240 (287)
T ss_pred cccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccc
Confidence 56688899999887656688999999999999999999999999999899999999888888777755322 12222223
Q ss_pred CCCCCccchhcccCC-chhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 371 QQPYDSSLRETFKDL-PTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 371 ~~~~~~~l~~~~~~~-~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
.......+.+.+... +..+.++|.+||..||.+||++.++|.||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 241 KKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred cccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 333334445555554 8999999999999999999999999999998
No 114
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.2e-44 Score=351.45 Aligned_cols=284 Identities=36% Similarity=0.648 Sum_probs=234.0
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
+|++.+.||.|+||.||+|.+..+++.||+|+++...........+.+|+++++.++|+||+++++++.. ....++||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~iv~ 79 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR--KGRLYLVF 79 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE--CCEEEEEE
Confidence 6999999999999999999999999999999987655445556778899999999999999999999987 67899999
Q ss_pred eeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCcc
Q 011763 211 EYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLT 290 (478)
Q Consensus 211 e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~ 290 (478)
||++++++..+......+++..+..++.||+.||.|||+++|+|+||+|+||++++++.+||+|||++............
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~ 159 (288)
T cd07833 80 EYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLT 159 (288)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcccccc
Confidence 99999888877666667999999999999999999999999999999999999999999999999999776554332444
Q ss_pred ccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc--ccc
Q 011763 291 SRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA--TLF 368 (478)
Q Consensus 291 ~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~--~~~ 368 (478)
...++..|+|||++.+...++.++||||||+++|+|++|++||.+.+..+.+..+...++..+...+........ ...
T Consensus 160 ~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07833 160 DYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVA 239 (288)
T ss_pred CcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccc
Confidence 566788999999998744789999999999999999999999999888888888888777776654433211100 000
Q ss_pred CCCCCCCccchhccc-CCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 369 KPQQPYDSSLRETFK-DLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 369 ~~~~~~~~~l~~~~~-~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
.+.......+...++ .++.++.+||++||..||++|||+.++++||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 240 FPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred cCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 011111112233333 358999999999999999999999999999998
No 115
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3.6e-45 Score=363.21 Aligned_cols=253 Identities=25% Similarity=0.428 Sum_probs=211.3
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCceEEEEEeec
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSCSIYLVFEYM 213 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~lv~e~~ 213 (478)
+.||+|+||+||++++..+++.||||+++.... .......+.+|+.++..+ +||||+++++++.. ...+|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~ 78 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQT--KDRLFFVMEYV 78 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc--CCEEEEEEcCC
Confidence 469999999999999999999999999986432 233445667899999888 79999999999877 67899999999
Q ss_pred cCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccc
Q 011763 214 EHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRV 293 (478)
Q Consensus 214 ~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 293 (478)
+++.+.........+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||++....... ......+
T Consensus 79 ~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~ 157 (318)
T cd05570 79 NGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG-VTTSTFC 157 (318)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCC-Cccccee
Confidence 987776666666689999999999999999999999999999999999999999999999999986532221 2223456
Q ss_pred cCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCC
Q 011763 294 VTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQP 373 (478)
Q Consensus 294 ~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 373 (478)
+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+....+......
T Consensus 158 g~~~y~aPE~~~~-~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~---------------------- 214 (318)
T cd05570 158 GTPDYIAPEILSY-QPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVR---------------------- 214 (318)
T ss_pred cCccccCHHHhcC-CCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC----------------------
Confidence 8999999999876 67899999999999999999999999988776666555331100
Q ss_pred CCccchhcccCCchhHHHHHHHhcCCCCCCccCH-----HHHHhCcccCCCCC
Q 011763 374 YDSSLRETFKDLPTTAVNLIETLLSVEPYKRATA-----SAALASEYFSTKPY 421 (478)
Q Consensus 374 ~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta-----~e~L~hp~f~~~~~ 421 (478)
....++..+.+||.+||..||.+||++ .+++.||||+...+
T Consensus 215 -------~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~ 260 (318)
T cd05570 215 -------YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDW 260 (318)
T ss_pred -------CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 012468899999999999999999999 99999999987544
No 116
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.7e-44 Score=351.70 Aligned_cols=282 Identities=37% Similarity=0.694 Sum_probs=230.4
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
+|++++.||.|++|.||+|++..+++.||||+++.... ......+.+|+.+++.++|+||+++++++.. ....+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 77 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE-EGTPSTAIREISLMKELKHENIVRLHDVIHT--ENKLMLVF 77 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc-ccchHHHHHHHHHHHhhcCCCEeeeeeeEee--CCcEEEEE
Confidence 48999999999999999999999999999999976543 2234556789999999999999999999987 56789999
Q ss_pred eeccCCchhhccCCC--CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 211 EYMEHDITGLLSCPD--IKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 211 e~~~~~ll~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||+++++...+.... ..+++..+..++.||+.||.|||++|++|+||||+||++++++.++|+|||++....... ..
T Consensus 78 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~-~~ 156 (284)
T cd07836 78 EYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV-NT 156 (284)
T ss_pred ecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc-cc
Confidence 999987766654432 468999999999999999999999999999999999999999999999999997544321 12
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF 368 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 368 (478)
.....++..|++||++.+...++.++|||+|||++|+|++|++||.+.+..+...++.+....+....|+..........
T Consensus 157 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd07836 157 FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKP 236 (284)
T ss_pred cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcc
Confidence 23345688999999987656678999999999999999999999999999999999998888888777765442111111
Q ss_pred CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 369 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 369 ~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
.........+....+.++..+.++|.+||+.||.+||++.++|+||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 237 TFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred cccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 111111122233345678999999999999999999999999999998
No 117
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2.1e-44 Score=353.24 Aligned_cols=286 Identities=42% Similarity=0.712 Sum_probs=227.6
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCC---ce
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSRLS---CS 205 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~---~~ 205 (478)
++|++.+.||.|+||.||++.+..+++.||||++............+.+|+.+++.+ +|+||+++++++..... ..
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 479999999999999999999999999999999876543333445677899999999 56999999998865321 23
Q ss_pred EEEEEeeccCCchhhccCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEec-CCcEEEeecccccc
Q 011763 206 IYLVFEYMEHDITGLLSCP----DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNN-EGVLKLADFGLANF 280 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~-~~~vkl~DFG~a~~ 280 (478)
.|+||||+++++...+... ...+++..++.++.||+.||.|||+++|+||||||+||+++. ++.+||+|||++..
T Consensus 81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeeccccee
Confidence 7999999998776655432 346899999999999999999999999999999999999998 88999999999875
Q ss_pred cCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccC
Q 011763 281 SNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKS 360 (478)
Q Consensus 281 ~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 360 (478)
..... .......+++.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..++..++.++...|...
T Consensus 161 ~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T cd07837 161 FSIPV-KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGV 239 (295)
T ss_pred cCCCc-cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcch
Confidence 43221 11223356888999999876566899999999999999999999999999999999999888888877766432
Q ss_pred CCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccC
Q 011763 361 KLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFS 417 (478)
Q Consensus 361 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~ 417 (478)
......... .......+....+.+++++.+||.+||..||.+||++.++|.||||+
T Consensus 240 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 240 SKLRDWHEF-PQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred hhccchhhc-CcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 211000000 00011122333457899999999999999999999999999999995
No 118
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=4e-45 Score=363.71 Aligned_cols=253 Identities=25% Similarity=0.395 Sum_probs=208.1
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHH-HHHhcCCCCeeeecceeeecCCceEEEEEeec
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREIL-ILRRLDHPNIIKLEGLITSRLSCSIYLVFEYM 213 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~ 213 (478)
+.||+|+||+||++++..+++.||+|++..... .......+..|.. +++.++||||+++++++.. ...+|+||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~--~~~~~lv~e~~ 78 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT--ADKLYFVLDYV 78 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe--CCEEEEEEcCC
Confidence 469999999999999999999999999975432 1222334445554 5678899999999998877 67899999999
Q ss_pred cCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccc
Q 011763 214 EHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRV 293 (478)
Q Consensus 214 ~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 293 (478)
+++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... ......+
T Consensus 79 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~ 157 (323)
T cd05575 79 NGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS-KTTSTFC 157 (323)
T ss_pred CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC-Ccccccc
Confidence 987776666666689999999999999999999999999999999999999999999999999987533221 2233456
Q ss_pred cCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCC
Q 011763 294 VTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQP 373 (478)
Q Consensus 294 ~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 373 (478)
+|+.|+|||++.+ ..++.++|||||||++|+|++|.+||...+..+....+.....
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~----------------------- 213 (323)
T cd05575 158 GTPEYLAPEVLRK-QPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPL----------------------- 213 (323)
T ss_pred CChhhcChhhhcC-CCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC-----------------------
Confidence 8999999999876 6789999999999999999999999998877776666543110
Q ss_pred CCccchhcccCCchhHHHHHHHhcCCCCCCccCH----HHHHhCcccCCCCC
Q 011763 374 YDSSLRETFKDLPTTAVNLIETLLSVEPYKRATA----SAALASEYFSTKPY 421 (478)
Q Consensus 374 ~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta----~e~L~hp~f~~~~~ 421 (478)
...+.++..+.+||.+||+.||.+||++ .++++||||....+
T Consensus 214 ------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~ 259 (323)
T cd05575 214 ------RLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINW 259 (323)
T ss_pred ------CCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence 0113568899999999999999999997 69999999987544
No 119
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=5.2e-45 Score=363.81 Aligned_cols=253 Identities=23% Similarity=0.409 Sum_probs=205.0
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCceEEEEEeec
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSCSIYLVFEYM 213 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~lv~e~~ 213 (478)
+.||+|+||.||++++..+++.||+|+++.... .......+.+|+.++..+ +||||++++++|.. ...+||||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~--~~~~~lv~e~~ 78 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQT--ESRLFFVIEFV 78 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEc--CCEEEEEEeCC
Confidence 468999999999999999999999999986543 233456677899999998 79999999999977 67899999999
Q ss_pred cCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccc
Q 011763 214 EHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRV 293 (478)
Q Consensus 214 ~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 293 (478)
+++.+..+......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...... ......+
T Consensus 79 ~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~ 157 (329)
T cd05588 79 SGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG-DTTSTFC 157 (329)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCC-Ccccccc
Confidence 987666555555689999999999999999999999999999999999999999999999999986432211 2233457
Q ss_pred cCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHH-HHHHcCCCCchhhccCCCCC
Q 011763 294 VTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTE--------VEQLHK-IFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 294 ~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~--------~~~~~~-i~~~~g~~~~~~~~~~~~~~ 364 (478)
+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||..... .+.+.+ +....
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 221 (329)
T cd05588 158 GTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ--------------- 221 (329)
T ss_pred CCccccCHHHHcC-CCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC---------------
Confidence 8999999999886 6789999999999999999999999963211 111111 11100
Q ss_pred ccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccC------HHHHHhCcccCCCCC
Q 011763 365 ATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT------ASAALASEYFSTKPY 421 (478)
Q Consensus 365 ~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t------a~e~L~hp~f~~~~~ 421 (478)
......++.++.+||.+||+.||.+|++ +.++++||||....+
T Consensus 222 --------------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~ 270 (329)
T cd05588 222 --------------IRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDW 270 (329)
T ss_pred --------------CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence 0001256788999999999999999987 789999999987544
No 120
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2e-44 Score=351.61 Aligned_cols=284 Identities=34% Similarity=0.618 Sum_probs=228.5
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
++|++++.||.|+||.||+|.+..+++.||+|++..........+.+.+|+++++.++||||+++++++.. ....|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 78 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRR--KKRLYLV 78 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhccc--CCeEEEE
Confidence 37999999999999999999998899999999987554333445667789999999999999999999976 6789999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL 289 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 289 (478)
|||++++++..+......+++..++.++.||+.||.|||+.+|+|+||+|+||++++++.++|+|||++....... ...
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~-~~~ 157 (286)
T cd07846 79 FEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-EVY 157 (286)
T ss_pred EecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-ccc
Confidence 9999998887776555568999999999999999999999999999999999999999999999999987654332 223
Q ss_pred cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC--ccc
Q 011763 290 TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH--ATL 367 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~--~~~ 367 (478)
....++..|+|||++.+...++.++|||||||++|+|++|++||......+....+....+......-....... ...
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07846 158 TDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGM 237 (286)
T ss_pred CcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcc
Confidence 345678899999998765667889999999999999999999999888888887777766554332111100000 000
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
..+.......+...++.++..+.+||.+||..||++|||+.++|+||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 238 RLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred ccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 1111112223334456789999999999999999999999999999998
No 121
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.6e-45 Score=365.81 Aligned_cols=254 Identities=28% Similarity=0.434 Sum_probs=211.8
Q ss_pred eeeeeecCceEEEEEEE---CCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEe
Q 011763 135 LEKIGQGTYSSVFRARD---LDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFE 211 (478)
Q Consensus 135 ~~~LG~G~~g~V~~~~~---~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e 211 (478)
++.||+|+||.||++++ ..+++.||+|++............+.+|+.+|++++||||+++++++.. ...+|+|||
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e 78 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQT--EGKLYLILD 78 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEc--CCEEEEEEc
Confidence 36799999999999986 3578999999998654433444556789999999999999999999887 678999999
Q ss_pred eccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccc
Q 011763 212 YMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTS 291 (478)
Q Consensus 212 ~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 291 (478)
|++++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... .....
T Consensus 79 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~~~~~ 157 (318)
T cd05582 79 FLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-KKAYS 157 (318)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-Cceec
Confidence 99986665555555679999999999999999999999999999999999999999999999999987654321 22334
Q ss_pred cccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCC
Q 011763 292 RVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQ 371 (478)
Q Consensus 292 ~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 371 (478)
..+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+.+..+.......
T Consensus 158 ~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~------------------- 217 (318)
T cd05582 158 FCGTVEYMAPEVVNR-RGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGM------------------- 217 (318)
T ss_pred ccCChhhcCHHHHcC-CCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCC-------------------
Confidence 578999999999876 667899999999999999999999999888777776664321110
Q ss_pred CCCCccchhcccCCchhHHHHHHHhcCCCCCCccC-----HHHHHhCcccCCCCC
Q 011763 372 QPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT-----ASAALASEYFSTKPY 421 (478)
Q Consensus 372 ~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t-----a~e~L~hp~f~~~~~ 421 (478)
...+++.+.+||++||+.||.+||+ +.+++.||||....+
T Consensus 218 ----------p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~ 262 (318)
T cd05582 218 ----------PQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDW 262 (318)
T ss_pred ----------CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCH
Confidence 1246888999999999999999999 788999999987544
No 122
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.2e-44 Score=360.40 Aligned_cols=258 Identities=27% Similarity=0.399 Sum_probs=214.7
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcC-CCCeeeecceeeecCCceEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLD-HPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~l 208 (478)
+|++.+.||+|+||+||+|++..+++.||+|++..+.. .....+.+..|+.++..+. |++|+++++++.. ...+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~~~~~l 78 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQT--VDRLYF 78 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEec--CCEEEE
Confidence 48889999999999999999999999999999976432 2334455677899998885 6778889888877 567999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||||++++.+..+......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ..
T Consensus 79 v~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~-~~ 157 (323)
T cd05615 79 VMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG-VT 157 (323)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC-cc
Confidence 99999987776666666679999999999999999999999999999999999999999999999999987543221 12
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF 368 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 368 (478)
.....+|+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+.......+.......
T Consensus 158 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~---------------- 220 (323)
T cd05615 158 TRTFCGTPDYIAPEIIAY-QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSY---------------- 220 (323)
T ss_pred ccCccCCccccCHHHHcC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC----------------
Confidence 234568999999999876 678999999999999999999999999988777777665421111
Q ss_pred CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccC-----HHHHHhCcccCCCCC
Q 011763 369 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT-----ASAALASEYFSTKPY 421 (478)
Q Consensus 369 ~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t-----a~e~L~hp~f~~~~~ 421 (478)
...++.++.+||.+||+.||.+|++ ..++++||||....+
T Consensus 221 -------------p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~ 265 (323)
T cd05615 221 -------------PKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDW 265 (323)
T ss_pred -------------CccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCH
Confidence 1246788999999999999999997 579999999987654
No 123
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=4e-44 Score=353.37 Aligned_cols=288 Identities=43% Similarity=0.720 Sum_probs=227.5
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecC------
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRL------ 202 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------ 202 (478)
.++|++.+.||+|+||.||+|.+..+++.||||++............+.+|+.++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 56899999999999999999999999999999998755433333345567999999999999999999876532
Q ss_pred CceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccC
Q 011763 203 SCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSN 282 (478)
Q Consensus 203 ~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~ 282 (478)
....|+||||+.+++...+......+++..++.++.||+.||.|||++|++|+||||+||+++.++.+||+|||++....
T Consensus 91 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 170 (310)
T cd07865 91 KGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFS 170 (310)
T ss_pred CceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCccccc
Confidence 24579999999988777776666679999999999999999999999999999999999999999999999999997554
Q ss_pred CCCC---CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhcc
Q 011763 283 TGHR---QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKK 359 (478)
Q Consensus 283 ~~~~---~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~ 359 (478)
.... .......++..|+|||++.+...++.++||||||+++|+|++|++||.+.+....+..+....+..+...|+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (310)
T cd07865 171 LSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPG 250 (310)
T ss_pred CCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence 3221 1122345688899999887655678899999999999999999999999988888888888888888776654
Q ss_pred CCCCC-ccccCCCCCCCccchhcc--cCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 360 SKLPH-ATLFKPQQPYDSSLRETF--KDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 360 ~~~~~-~~~~~~~~~~~~~l~~~~--~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
..... .................. ...+..+.+||.+||..||.+|||++++|+||||
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 251 VDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred ccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 32111 000000011100111111 1235678999999999999999999999999998
No 124
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=7.1e-44 Score=349.00 Aligned_cols=284 Identities=37% Similarity=0.626 Sum_probs=222.9
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|.+++.||+|+||.||+|.+..+++.||+|++...... .....+.+|+.+++.++|+||+++++++.. ....|+
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~--~~~~~l 80 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE-GVPFTAIREASLLKGLKHANIVLLHDIIHT--KETLTF 80 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC-CCcHHHHHHHHHHHhcCCCCEeEEEEEEec--CCeEEE
Confidence 46899999999999999999999999999999998755322 223345689999999999999999999876 668999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||||+.++++..+......+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||+++...... ..
T Consensus 81 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~ 159 (291)
T cd07870 81 VFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS-QT 159 (291)
T ss_pred EEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCC-CC
Confidence 99999988877766555578899999999999999999999999999999999999999999999999987543221 12
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHcCCCCchhhccCCC-CCcc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRT-EVEQLHKIFKLCGSPPDDYWKKSKL-PHAT 366 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~-~~~~~~~i~~~~g~~~~~~~~~~~~-~~~~ 366 (478)
.....+++.|+|||++.+...++.++|||||||++|+|++|.+||.... ..+.+.++...++.|....|..... +...
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (291)
T cd07870 160 YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYK 239 (291)
T ss_pred CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhccccc
Confidence 2334568899999998765567889999999999999999999997654 4466777777788777665543221 1100
Q ss_pred ccCCCCCCCccchhccc--CCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 367 LFKPQQPYDSSLRETFK--DLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 367 ~~~~~~~~~~~l~~~~~--~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
...........+...+. ..+..+.+||.+||..||.+|||+.|+|.||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 240 PEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred chhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 00000001111222222 236789999999999999999999999999998
No 125
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-45 Score=365.27 Aligned_cols=258 Identities=28% Similarity=0.437 Sum_probs=231.6
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|..++.+|+|+||.+++++++..++.|++|+++.........+...+|+.+++++.|||||.+.+.|... +..+||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~-~~~l~I 81 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEED-GQLLCI 81 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcC-CceEEE
Confidence 5689999999999999999999999999999999999887777777788999999999999999999999873 455999
Q ss_pred EEeeccCCchhhcc-CC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 209 VFEYMEHDITGLLS-CP-DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 209 v~e~~~~~ll~~~~-~~-~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
||+||+|+.+...+ .. +..|+++.+..|+.||+.||.|||++.|+|||||+.||+++.++.|||.|||+|+..+...
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~- 160 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED- 160 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch-
Confidence 99999987665543 33 3579999999999999999999999999999999999999999999999999999887653
Q ss_pred CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcc
Q 011763 287 QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHAT 366 (478)
Q Consensus 287 ~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 366 (478)
....+.+||+.||.||++.+ .+|+.++|||||||++|||++-+++|.+.+-...+.+|++.+..|-+
T Consensus 161 ~~a~tvvGTp~YmcPEil~d-~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp------------ 227 (426)
T KOG0589|consen 161 SLASTVVGTPYYMCPEILSD-IPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLP------------ 227 (426)
T ss_pred hhhheecCCCcccCHHHhCC-CCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCC------------
Confidence 35567899999999999887 89999999999999999999999999999999999999887644422
Q ss_pred ccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccC
Q 011763 367 LFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFS 417 (478)
Q Consensus 367 ~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~ 417 (478)
...+.+++.||+.||..+|..||++.++|.+|.+.
T Consensus 228 ----------------~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~ 262 (426)
T KOG0589|consen 228 ----------------SMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLL 262 (426)
T ss_pred ----------------ccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence 25688999999999999999999999999999876
No 126
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.2e-44 Score=367.99 Aligned_cols=277 Identities=25% Similarity=0.342 Sum_probs=210.8
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
...|.+.+.||+|+||.||++.+..+++.||||.... ..+.+|+++|++|+|+|||++++++.. ....||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~l~~~~~~--~~~~~l 237 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLALLDVRVV--GGLTCL 237 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCcEEEEEEE--CCEEEE
Confidence 4579999999999999999999999999999996432 224579999999999999999999877 677899
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC-
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ- 287 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~- 287 (478)
|||++.+++...+......+++..++.|+.||+.||.|||++||+||||||+||||+.++.+||+|||+++........
T Consensus 238 v~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~ 317 (461)
T PHA03211 238 VLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTP 317 (461)
T ss_pred EEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccc
Confidence 9999998888777665567999999999999999999999999999999999999999999999999999765432211
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCC-CCC------ChHHHHHHHHHHcCCCCchhhcc-
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPIL-QGR------TEVEQLHKIFKLCGSPPDDYWKK- 359 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf-~~~------~~~~~~~~i~~~~g~~~~~~~~~- 359 (478)
......+|+.|+|||++.+ ..++.++|||||||+||||++|..++ ... ....++.+++.........+-..
T Consensus 318 ~~~~~~GT~~Y~APE~~~~-~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~ 396 (461)
T PHA03211 318 FHYGIAGTVDTNAPEVLAG-DPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHA 396 (461)
T ss_pred cccccCCCcCCcCHHHHcC-CCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCc
Confidence 1223568999999999987 67899999999999999999987554 322 12344555554433322111000
Q ss_pred -------CCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 360 -------SKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 360 -------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
..........+ .+.......+..++.++.+||.+||+.||.+|||+.|+|+||||+.
T Consensus 397 ~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 397 GSRLVSQYRHRAARNRRP--AYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred chHHHHHHHhhhhcccCC--ccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 00000000000 0000001112356778999999999999999999999999999975
No 127
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=3.7e-44 Score=349.28 Aligned_cols=281 Identities=42% Similarity=0.765 Sum_probs=228.3
Q ss_pred eeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEe
Q 011763 132 FEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFE 211 (478)
Q Consensus 132 y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e 211 (478)
|++++.||.|++|.||++.+..++..||+|++..+.........+.+|+.+++.++||||+++++++.+ ....|++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~--~~~~~iv~e 78 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHS--ENKLYLVFE 78 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheecc--CCeEEEEEe
Confidence 678899999999999999999999999999998665444444567789999999999999999999877 678999999
Q ss_pred eccCCchhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCcc
Q 011763 212 YMEHDITGLLSCPD-IKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLT 290 (478)
Q Consensus 212 ~~~~~ll~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~ 290 (478)
|+++.+...+.... ..+++..+..++.||+.||.|||+++++|+||+|+||+++.++.++|+|||++....... ....
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~-~~~~ 157 (283)
T cd07835 79 FLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV-RTYT 157 (283)
T ss_pred ccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc-cccC
Confidence 99876655544332 368999999999999999999999999999999999999999999999999997543321 1122
Q ss_pred ccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCC-CCccccC
Q 011763 291 SRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL-PHATLFK 369 (478)
Q Consensus 291 ~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~-~~~~~~~ 369 (478)
...++..|+|||++.+...++.++|||||||++|+|++|++||...+..+.+.++++..+.+....|..... +......
T Consensus 158 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd07835 158 HEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTF 237 (283)
T ss_pred ccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhc
Confidence 335588899999887655678999999999999999999999999998888888888888888777654321 1111100
Q ss_pred CCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 370 PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 370 ~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
+. .....+....+.++..+.+||.+||+.||.+|||+.++|.||||
T Consensus 238 ~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 238 PK-WARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred cc-ccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 00 01112233346788999999999999999999999999999998
No 128
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.1e-44 Score=361.83 Aligned_cols=266 Identities=23% Similarity=0.335 Sum_probs=214.3
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
++|+++++||+|+||+||++++..+++.||+|++..... .......+.+|+.++..++|+||+++++.+.+ ...+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~l 78 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQD--ENNLYL 78 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEec--CCEEEE
Confidence 379999999999999999999999999999999864321 22334457789999999999999999998877 678999
Q ss_pred EEeeccCCchhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 209 VFEYMEHDITGLLS-CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 209 v~e~~~~~ll~~~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
||||+.++.+..+. .....+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||++.........
T Consensus 79 v~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~ 158 (332)
T cd05623 79 VMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV 158 (332)
T ss_pred EEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcc
Confidence 99999876555444 43567899999999999999999999999999999999999999999999999998754333222
Q ss_pred CccccccCCcccCcccccC----CCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCC
Q 011763 288 PLTSRVVTLWYRPPELLLG----ATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP 363 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~----~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 363 (478)
.....++|+.|+|||++.. ...++.++|||||||++|||++|+.||...+..+.+.++.......+
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~---------- 228 (332)
T cd05623 159 QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ---------- 228 (332)
T ss_pred eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCcccc----------
Confidence 2334578999999999862 34688999999999999999999999998887777766643211000
Q ss_pred CccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCC--ccCHHHHHhCcccCCCCC
Q 011763 364 HATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYK--RATASAALASEYFSTKPY 421 (478)
Q Consensus 364 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~--R~ta~e~L~hp~f~~~~~ 421 (478)
+......++.++++||.+||..++.+ |+++.++++||||....|
T Consensus 229 --------------~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~~ 274 (332)
T cd05623 229 --------------FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGIDW 274 (332)
T ss_pred --------------CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCCCH
Confidence 00112357899999999999766555 689999999999987544
No 129
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1e-44 Score=361.66 Aligned_cols=253 Identities=24% Similarity=0.428 Sum_probs=204.6
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCceEEEEEeec
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSCSIYLVFEYM 213 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~lv~e~~ 213 (478)
+.||+|+||+||++++..+++.||+|++..... .......+.+|+.++.++ +||||+++++++.. ...+||||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~--~~~~~lv~E~~ 78 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT--ESRLFFVIEYV 78 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe--CCEEEEEEeCC
Confidence 469999999999999999999999999986532 234455677899988877 89999999999987 67899999999
Q ss_pred cCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccc
Q 011763 214 EHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRV 293 (478)
Q Consensus 214 ~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 293 (478)
+++.+.........+++..++.++.||+.||.|||+++|+||||||+||||+.++.+||+|||+++...... .......
T Consensus 79 ~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~-~~~~~~~ 157 (329)
T cd05618 79 NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-DTTSTFC 157 (329)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC-Ccccccc
Confidence 987776665556689999999999999999999999999999999999999999999999999987532211 2223457
Q ss_pred cCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC--------hHHHH-HHHHHHcCCCCchhhccCCCCC
Q 011763 294 VTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRT--------EVEQL-HKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 294 ~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~--------~~~~~-~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.... ..+.+ ..+....
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~--------------- 221 (329)
T cd05618 158 GTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ--------------- 221 (329)
T ss_pred CCccccCHHHHcC-CCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC---------------
Confidence 8999999999886 678999999999999999999999995311 11111 1111100
Q ss_pred ccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccC------HHHHHhCcccCCCCC
Q 011763 365 ATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT------ASAALASEYFSTKPY 421 (478)
Q Consensus 365 ~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t------a~e~L~hp~f~~~~~ 421 (478)
......++..+.+||.+||+.||.+|++ +.++++||||....|
T Consensus 222 --------------~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~ 270 (329)
T cd05618 222 --------------IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW 270 (329)
T ss_pred --------------CCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence 0011356788999999999999999998 589999999987544
No 130
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-45 Score=342.15 Aligned_cols=266 Identities=26% Similarity=0.372 Sum_probs=222.7
Q ss_pred eeee-eeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCceEEEE
Q 011763 132 FEKL-EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 132 y~~~-~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
|++. +.||+|+|+.|--|....++..||||++.+. ......++.+|++++..+ .|+||++|+++|++ +..+|||
T Consensus 79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq--~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd--d~~FYLV 154 (463)
T KOG0607|consen 79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ--PGHSRSRVFREVETFYQCQGHKNILQLIEFFED--DTRFYLV 154 (463)
T ss_pred HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcC--CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc--cceEEEE
Confidence 4433 6799999999999999999999999999866 345667888999999999 69999999999988 6789999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCC---cEEEeecccccccC----
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG---VLKLADFGLANFSN---- 282 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~---~vkl~DFG~a~~~~---- 282 (478)
||-|.|+.+...+.....|++.++..++++|+.||+|||.+||.||||||+|||..+.+ -||||||.+..-..
T Consensus 155 fEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~ 234 (463)
T KOG0607|consen 155 FEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNND 234 (463)
T ss_pred EecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCC
Confidence 99999977666666777899999999999999999999999999999999999998775 48999999974322
Q ss_pred --CCCCCCccccccCCcccCccccc----CCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC---------------hHHH
Q 011763 283 --TGHRQPLTSRVVTLWYRPPELLL----GATDYGPSVDLWSVGCVFAELLIGKPILQGRT---------------EVEQ 341 (478)
Q Consensus 283 --~~~~~~~~~~~~t~~y~APE~l~----~~~~~~~~~DiwslG~il~elltG~~pf~~~~---------------~~~~ 341 (478)
......+.+.+|+..|||||+.. ....|+.++|.||||+|||.||+|.+||.+.. ....
T Consensus 235 ~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~L 314 (463)
T KOG0607|consen 235 CSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKL 314 (463)
T ss_pred CCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHH
Confidence 12223345567888999999863 23578999999999999999999999998753 2345
Q ss_pred HHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCC
Q 011763 342 LHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPY 421 (478)
Q Consensus 342 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~ 421 (478)
++.|.+.....|+..| .+++.+++|||..+|..|+.+|.++.++|+|||++....
T Consensus 315 FesIQEGkYeFPdkdW-------------------------ahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~ 369 (463)
T KOG0607|consen 315 FESIQEGKYEFPDKDW-------------------------AHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAP 369 (463)
T ss_pred HHHHhccCCcCChhhh-------------------------HHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccch
Confidence 6666666666666555 589999999999999999999999999999999987554
Q ss_pred CCCCC
Q 011763 422 ACDLS 426 (478)
Q Consensus 422 ~~~~~ 426 (478)
.+..+
T Consensus 370 ekalp 374 (463)
T KOG0607|consen 370 EKALP 374 (463)
T ss_pred hccCC
Confidence 44433
No 131
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.2e-44 Score=347.55 Aligned_cols=260 Identities=30% Similarity=0.474 Sum_probs=212.5
Q ss_pred eeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEe
Q 011763 132 FEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFE 211 (478)
Q Consensus 132 y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e 211 (478)
|++.+.||+|+||+||++++..+++.||+|++..............+|+.++++++||||+++++++.. ....++|||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~~~~v~~ 78 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD--DNYLYIVME 78 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE--SSEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc--ccccccccc
Confidence 789999999999999999999999999999998765444444445569999999999999999999988 678999999
Q ss_pred eccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccc
Q 011763 212 YMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTS 291 (478)
Q Consensus 212 ~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 291 (478)
|+.++.+..+......+++..+..++.||+.||.+||+++|+|+||||+||+++.++.++|+|||.+.... ........
T Consensus 79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-~~~~~~~~ 157 (260)
T PF00069_consen 79 YCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS-ENNENFNP 157 (260)
T ss_dssp EETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEEST-STTSEBSS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence 99995555444455678999999999999999999999999999999999999999999999999997542 12233445
Q ss_pred cccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCC
Q 011763 292 RVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQ 371 (478)
Q Consensus 292 ~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 371 (478)
..++..|+|||++.....++.++||||||+++|+|++|..||......+....+...........+.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 224 (260)
T PF00069_consen 158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQ------------- 224 (260)
T ss_dssp SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTT-------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccccc-------------
Confidence 6779999999998734778999999999999999999999999885444444444333222111100
Q ss_pred CCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 372 QPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 372 ~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
.....+..+.+||.+||+.||++|||+.++++||||
T Consensus 225 ---------~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 225 ---------QSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp ---------SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred ---------ccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 001234789999999999999999999999999998
No 132
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.7e-44 Score=358.06 Aligned_cols=253 Identities=27% Similarity=0.428 Sum_probs=207.6
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCceEEEEEeec
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSCSIYLVFEYM 213 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~lv~e~~ 213 (478)
+.||+|+||+||+|++..+++.||||+++.... ..........|..++..+ +||||+++++++.+ ...+|+||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~--~~~~~lv~ey~ 78 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQT--KENLFFVMEYL 78 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEe--CCEEEEEEeCC
Confidence 469999999999999999999999999976432 122334556688888764 99999999999987 67899999999
Q ss_pred cCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccc
Q 011763 214 EHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRV 293 (478)
Q Consensus 214 ~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 293 (478)
+++.+..+......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... .......
T Consensus 79 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~ 157 (316)
T cd05619 79 NGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD-AKTCTFC 157 (316)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-Cceeeec
Confidence 987666665555678999999999999999999999999999999999999999999999999987532211 2223456
Q ss_pred cCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCC
Q 011763 294 VTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQP 373 (478)
Q Consensus 294 ~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 373 (478)
+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+.... +.
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~--~~-------------------- 214 (316)
T cd05619 158 GTPDYIAPEILLG-QKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDN--PC-------------------- 214 (316)
T ss_pred CCccccCHHHHcC-CCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CC--------------------
Confidence 8999999999876 678999999999999999999999999887766665543211 00
Q ss_pred CCccchhcccCCchhHHHHHHHhcCCCCCCccCHH-HHHhCcccCCCCC
Q 011763 374 YDSSLRETFKDLPTTAVNLIETLLSVEPYKRATAS-AALASEYFSTKPY 421 (478)
Q Consensus 374 ~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~-e~L~hp~f~~~~~ 421 (478)
....++.++.+||.+||+.||.+|+++. +++.||||....+
T Consensus 215 -------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~~ 256 (316)
T cd05619 215 -------YPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREIDW 256 (316)
T ss_pred -------CCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCCH
Confidence 0013677899999999999999999996 8999999987654
No 133
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.2e-44 Score=361.53 Aligned_cols=267 Identities=24% Similarity=0.336 Sum_probs=215.5
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
++|++++.||+|+||+||++++..+++.||+|++..... .......+.+|+.++..++|+||+++++++.. ....||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~--~~~~~l 78 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQD--ENYLYL 78 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc--CCEEEE
Confidence 479999999999999999999999999999999875321 23334557789999999999999999999877 678999
Q ss_pred EEeeccCCchhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 209 VFEYMEHDITGLLSC-PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 209 v~e~~~~~ll~~~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
||||+.++.+..+.. ....+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++.........
T Consensus 79 v~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 158 (331)
T cd05624 79 VMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV 158 (331)
T ss_pred EEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCce
Confidence 999998866555443 3557899999999999999999999999999999999999999999999999999765443222
Q ss_pred CccccccCCcccCcccccCC----CCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCC
Q 011763 288 PLTSRVVTLWYRPPELLLGA----TDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP 363 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~----~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 363 (478)
......+|+.|+|||++.+. ..++.++|||||||+||+|++|+.||...+..+.+.++......++
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~---------- 228 (331)
T cd05624 159 QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ---------- 228 (331)
T ss_pred eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCccc----------
Confidence 22335689999999988642 3578899999999999999999999998887777666643211100
Q ss_pred CccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCC--ccCHHHHHhCcccCCCCCC
Q 011763 364 HATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYK--RATASAALASEYFSTKPYA 422 (478)
Q Consensus 364 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~--R~ta~e~L~hp~f~~~~~~ 422 (478)
+...+..+++++++||.+||..++.+ |++++++++||||....|.
T Consensus 229 --------------~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~~~~ 275 (331)
T cd05624 229 --------------FPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGIDWE 275 (331)
T ss_pred --------------CCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCCCHH
Confidence 01112357889999999999976655 5699999999999875543
No 134
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=2e-44 Score=360.25 Aligned_cols=292 Identities=32% Similarity=0.556 Sum_probs=235.1
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeec--CCceEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSR--LSCSIY 207 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~~~ 207 (478)
++|++.+.||.|+||.||++.+..+++.||+|++............+.+|+.+|+.++||||+++++++... ....+|
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 589999999999999999999999999999999976543344556677899999999999999999988642 245789
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC-
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR- 286 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~- 286 (478)
+||||+.+++...+.. ...+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||++........
T Consensus 85 lv~e~~~~~l~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 163 (334)
T cd07855 85 VVMDLMESDLHHIIHS-DQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE 163 (334)
T ss_pred EEEehhhhhHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcC
Confidence 9999998766655543 44699999999999999999999999999999999999999999999999999975533221
Q ss_pred --CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 287 --QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 287 --~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
.......++..|+|||++.+...++.++|||||||++|+|++|++||...+...++..+...+|.++...+.......
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 243 (334)
T cd07855 164 HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDR 243 (334)
T ss_pred CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhh
Confidence 112234678899999998764568899999999999999999999999999889999999999999877654322111
Q ss_pred ccc--cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCCC
Q 011763 365 ATL--FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYA 422 (478)
Q Consensus 365 ~~~--~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~~ 422 (478)
... ..........+...++.++.++.+||.+||+.||++|||+.++|.||||...+.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~ 303 (334)
T cd07855 244 VRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDP 303 (334)
T ss_pred HHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCC
Confidence 000 0001111112233446789999999999999999999999999999999875544
No 135
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.7e-44 Score=357.50 Aligned_cols=280 Identities=25% Similarity=0.367 Sum_probs=214.3
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|++.++||.|+||.||++.+..++..+|+|++.... .......+.+|+++|+.++|+||++++++|.. ...+||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~l 80 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS--DGEISI 80 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEE--CCEEEE
Confidence 568999999999999999999999999999999987653 34455678899999999999999999999987 678999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSR-GVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
||||+.++.+..+......+++..+..++.||+.||.|||+. +|+|+||||+|||++.++.+||+|||++......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--- 157 (333)
T cd06650 81 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 157 (333)
T ss_pred EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh---
Confidence 999999877666655556789999999999999999999975 7999999999999999999999999998755322
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC---
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH--- 364 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~--- 364 (478)
......++..|+|||++.+ ..++.++|||||||++|+|++|+.||......+... + ++.+....+.......
T Consensus 158 ~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~ 232 (333)
T cd06650 158 MANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELEL-M---FGCPVEGDPAESETSPRPR 232 (333)
T ss_pred ccccCCCCccccCHHHhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHH-H---hcCcccCCccccccCcccC
Confidence 1233467899999999876 668999999999999999999999998765433322 1 1111111110000000
Q ss_pred --ccc---cCC-CCCCCc-------cchh-----cccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 365 --ATL---FKP-QQPYDS-------SLRE-----TFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 365 --~~~---~~~-~~~~~~-------~l~~-----~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
... ..+ ..+... .+.. ....++.++++||.+||++||++|||+.|+|.||||+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 233 PPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred CccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 000 000 000000 0000 001356789999999999999999999999999999864
No 136
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1e-43 Score=355.51 Aligned_cols=290 Identities=34% Similarity=0.554 Sum_probs=229.6
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecC---Cce
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRL---SCS 205 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~---~~~ 205 (478)
.++|++.+.||+|+||.||++++..+++.||+|++.... .......+.+|+.+++.++|+||+++++++.... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE-HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 468999999999999999999999999999999986432 2234456778999999999999999999875421 246
Q ss_pred EEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC
Q 011763 206 IYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH 285 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~ 285 (478)
.|+|+||+.+.+...+.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 83 ~~lv~e~~~~~l~~~~~~--~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 160 (336)
T cd07849 83 VYIVQELMETDLYKLIKT--QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH 160 (336)
T ss_pred EEEEehhcccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence 899999999876655533 368999999999999999999999999999999999999999999999999987654321
Q ss_pred C--CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCC
Q 011763 286 R--QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP 363 (478)
Q Consensus 286 ~--~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 363 (478)
. .......+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+....+..+...++.++.+.+......
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (336)
T cd07849 161 DHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISL 240 (336)
T ss_pred cccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhch
Confidence 1 11223467899999998766567899999999999999999999999998888888888888888776655432211
Q ss_pred CccccCC--CCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCC
Q 011763 364 HATLFKP--QQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPY 421 (478)
Q Consensus 364 ~~~~~~~--~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~ 421 (478)
....+.. .......+....+.+++++.+||.+||+.||.+|||+.++|+||||+....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~ 300 (336)
T cd07849 241 RARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD 300 (336)
T ss_pred hhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence 1100000 000111122334567889999999999999999999999999999986543
No 137
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=9.3e-44 Score=355.52 Aligned_cols=296 Identities=40% Similarity=0.728 Sum_probs=236.0
Q ss_pred ccceee-eeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHH------------HHHHHHHHHHHHhcCCCCeeeec
Q 011763 129 ADAFEK-LEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPES------------VRFMAREILILRRLDHPNIIKLE 195 (478)
Q Consensus 129 ~~~y~~-~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~------------~~~~~~E~~~l~~l~h~nIv~l~ 195 (478)
.++|.. .+.||.|+||+||++.+..+++.||||++......... ...+.+|+.+++.++|+||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 346765 47799999999999999999999999998754322100 12466899999999999999999
Q ss_pred ceeeecCCceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeec
Q 011763 196 GLITSRLSCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADF 275 (478)
Q Consensus 196 ~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DF 275 (478)
+++.. ....|+||||+.+++...+. ....+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+||
T Consensus 87 ~~~~~--~~~~~lv~e~~~~~l~~~l~-~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~df 163 (335)
T PTZ00024 87 DVYVE--GDFINLVMDIMASDLKKVVD-RKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADF 163 (335)
T ss_pred EEEec--CCcEEEEEeccccCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCc
Confidence 99877 67899999999987666554 4456899999999999999999999999999999999999999999999999
Q ss_pred ccccccCCC-------------CCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 011763 276 GLANFSNTG-------------HRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQL 342 (478)
Q Consensus 276 G~a~~~~~~-------------~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~ 342 (478)
|++...... .........+++.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 243 (335)
T PTZ00024 164 GLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQL 243 (335)
T ss_pred cceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 998755410 1111223345788999999877566799999999999999999999999999999999
Q ss_pred HHHHHHcCCCCchhhccCC-CCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCC
Q 011763 343 HKIFKLCGSPPDDYWKKSK-LPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPY 421 (478)
Q Consensus 343 ~~i~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~ 421 (478)
..++..++.++...|.... .+....+. ......+...+...+..+.+||.+||..||++|||++++|.||||+..+.
T Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~ 321 (335)
T PTZ00024 244 GRIFELLGTPNEDNWPQAKKLPLYTEFT--PRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPL 321 (335)
T ss_pred HHHHHHhCCCchhhCcchhhcccccccC--cCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCC
Confidence 9999999988877665432 11111111 11112233445567889999999999999999999999999999998887
Q ss_pred CCCCCCCC
Q 011763 422 ACDLSSLP 429 (478)
Q Consensus 422 ~~~~~~~p 429 (478)
++.+...|
T Consensus 322 ~~~~~~~~ 329 (335)
T PTZ00024 322 PCDPSQLP 329 (335)
T ss_pred CCCcccCC
Confidence 76655443
No 138
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-45 Score=351.43 Aligned_cols=280 Identities=26% Similarity=0.447 Sum_probs=224.2
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcC-C-C----CeeeecceeeecC
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLD-H-P----NIIKLEGLITSRL 202 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~-h-~----nIv~l~~~~~~~~ 202 (478)
.++|+++..||+|.||.|-.|++..++..||||+++.- ....+...-|+++|+++. + | -+|++.++|.-
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V---~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdy-- 162 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV---DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDY-- 162 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH---HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhc--
Confidence 56899999999999999999999999999999999732 233344556999999993 2 2 36788888877
Q ss_pred CceEEEEEeeccCCchhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEec---------------
Q 011763 203 SCSIYLVFEYMEHDITGLLSC-PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNN--------------- 266 (478)
Q Consensus 203 ~~~~~lv~e~~~~~ll~~~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~--------------- 266 (478)
.+++|||+|.++-++.+.+.. .-.+++...++.+.+||+.+++|||+.+++|.||||+|||+.+
T Consensus 163 rghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~ 242 (415)
T KOG0671|consen 163 RGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCF 242 (415)
T ss_pred cCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccce
Confidence 678999999999888777765 3457999999999999999999999999999999999999843
Q ss_pred -----CCcEEEeecccccccCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 011763 267 -----EGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQ 341 (478)
Q Consensus 267 -----~~~vkl~DFG~a~~~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~ 341 (478)
+-.|+|+|||.|+.....+ ...+.|..|+|||++++ -.|+.++||||+||||+||.+|..+|++.++.+.
T Consensus 243 ~r~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRHYRAPEViLg-LGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EH 317 (415)
T KOG0671|consen 243 IRPLKSTAIKVIDFGSATFDHEHH----STIVSTRHYRAPEVILG-LGWSQPCDVWSIGCILVELYTGETLFQTHENLEH 317 (415)
T ss_pred eccCCCcceEEEecCCcceeccCc----ceeeeccccCCchheec-cCcCCccCceeeeeEEEEeeccceecccCCcHHH
Confidence 2258999999998776543 55677999999999998 8899999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCchhhccC-----------CCCCccccCC---CCCCCccchhcccC---CchhHHHHHHHhcCCCCCCc
Q 011763 342 LHKIFKLCGSPPDDYWKKS-----------KLPHATLFKP---QQPYDSSLRETFKD---LPTTAVNLIETLLSVEPYKR 404 (478)
Q Consensus 342 ~~~i~~~~g~~~~~~~~~~-----------~~~~~~~~~~---~~~~~~~l~~~~~~---~~~~l~~Li~~mL~~dP~~R 404 (478)
++.|...+|++|.....+. .|++...... .......+...... ....+.|||++||.+||.+|
T Consensus 318 LaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~R 397 (415)
T KOG0671|consen 318 LAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARR 397 (415)
T ss_pred HHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcccc
Confidence 9999999998887765443 1111111000 00001112222211 22358999999999999999
Q ss_pred cCHHHHHhCcccCC
Q 011763 405 ATASAALASEYFST 418 (478)
Q Consensus 405 ~ta~e~L~hp~f~~ 418 (478)
+|+.|+|.||||+.
T Consensus 398 iTl~EAL~HpFF~~ 411 (415)
T KOG0671|consen 398 ITLREALSHPFFAR 411 (415)
T ss_pred ccHHHHhcCHHhhc
Confidence 99999999999975
No 139
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=5.2e-45 Score=363.95 Aligned_cols=252 Identities=27% Similarity=0.394 Sum_probs=205.4
Q ss_pred eeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhc---CCCCeeeecceeeecCCceEEEEEeec
Q 011763 138 IGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRL---DHPNIIKLEGLITSRLSCSIYLVFEYM 213 (478)
Q Consensus 138 LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~~~~~~~~lv~e~~ 213 (478)
||+|+||+||+|++..+++.||+|++..... ..........|..++..+ +||||+++++++.. ...+|+||||+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~--~~~~~lv~e~~ 78 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQT--DSDLYLVTDYM 78 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEec--CCeEEEEEcCC
Confidence 6999999999999999999999999975432 122333445677777665 79999999998877 67899999999
Q ss_pred cCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccc
Q 011763 214 EHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRV 293 (478)
Q Consensus 214 ~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 293 (478)
.++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... ......+
T Consensus 79 ~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~ 157 (330)
T cd05586 79 SGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN-KTTNTFC 157 (330)
T ss_pred CCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-CCccCcc
Confidence 987666555566689999999999999999999999999999999999999999999999999987543221 2234567
Q ss_pred cCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCC
Q 011763 294 VTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQP 373 (478)
Q Consensus 294 ~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 373 (478)
+|+.|+|||++.+...++.++|||||||++|+|++|+.||.+.+..+.+..+.......+
T Consensus 158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~-------------------- 217 (330)
T cd05586 158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFP-------------------- 217 (330)
T ss_pred CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCC--------------------
Confidence 899999999987655689999999999999999999999998877666555532110000
Q ss_pred CCccchhcccCCchhHHHHHHHhcCCCCCCcc----CHHHHHhCcccCCCC
Q 011763 374 YDSSLRETFKDLPTTAVNLIETLLSVEPYKRA----TASAALASEYFSTKP 420 (478)
Q Consensus 374 ~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~----ta~e~L~hp~f~~~~ 420 (478)
...+++++.+||.+||+.||.+|| ++.++++||||....
T Consensus 218 --------~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~ 260 (330)
T cd05586 218 --------KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADID 260 (330)
T ss_pred --------CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCC
Confidence 013678899999999999999998 799999999998644
No 140
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.9e-44 Score=359.10 Aligned_cols=252 Identities=25% Similarity=0.377 Sum_probs=206.8
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCCC-hHHHHHHHHHH-HHHHhcCCCCeeeecceeeecCCceEEEEEeec
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFE-PESVRFMAREI-LILRRLDHPNIIKLEGLITSRLSCSIYLVFEYM 213 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~-~~~~~~~~~E~-~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~ 213 (478)
+.||+|+||+||+|++..+++.||+|++...... ......+..|. .+++.++||||+++++++.. ...+|+||||+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~--~~~~~lv~e~~ 78 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT--ADKLYFVLDYI 78 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEc--CCeEEEEEeCC
Confidence 4699999999999999999999999999754321 12223334444 45678899999999999877 67799999999
Q ss_pred cCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccc
Q 011763 214 EHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRV 293 (478)
Q Consensus 214 ~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 293 (478)
+++.+..+......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...... ......+
T Consensus 79 ~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~-~~~~~~~ 157 (325)
T cd05602 79 NGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-GTTSTFC 157 (325)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCC-CCccccc
Confidence 987776666666678999999999999999999999999999999999999999999999999987543211 2234457
Q ss_pred cCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCC
Q 011763 294 VTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQP 373 (478)
Q Consensus 294 ~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 373 (478)
+|+.|+|||++.+ ..++.++|||||||++|+|++|.+||...+..+.+..+.....
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~----------------------- 213 (325)
T cd05602 158 GTPEYLAPEVLHK-QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL----------------------- 213 (325)
T ss_pred CCccccCHHHHcC-CCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCc-----------------------
Confidence 8999999999886 6789999999999999999999999998887777666643110
Q ss_pred CCccchhcccCCchhHHHHHHHhcCCCCCCccCHH----HHHhCcccCCCC
Q 011763 374 YDSSLRETFKDLPTTAVNLIETLLSVEPYKRATAS----AALASEYFSTKP 420 (478)
Q Consensus 374 ~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~----e~L~hp~f~~~~ 420 (478)
...+.++..+.+||.+||+.||.+|+++. ++++|+||....
T Consensus 214 ------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~ 258 (325)
T cd05602 214 ------QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPIN 258 (325)
T ss_pred ------CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCC
Confidence 01136788999999999999999999875 899999997643
No 141
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.3e-43 Score=341.40 Aligned_cols=257 Identities=28% Similarity=0.437 Sum_probs=211.5
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCC---hHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFE---PESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSI 206 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 206 (478)
++|++.+.||+|++|.||++.+..+++.||+|.+...... ......+.+|+.++++++||||+++++++.. ...+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~ 79 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRD--DETL 79 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEcc--CCeE
Confidence 4699999999999999999999999999999998754332 2234567889999999999999999999987 5689
Q ss_pred EEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 207 YLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 207 ~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
|+||||++++.+..+......+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++........
T Consensus 80 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~ 159 (263)
T cd06625 80 SIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS 159 (263)
T ss_pred EEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccc
Confidence 99999999876665555555789999999999999999999999999999999999999999999999999875543211
Q ss_pred CCc--cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 287 QPL--TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 287 ~~~--~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
... ....++..|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+...++......
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~------------- 225 (263)
T cd06625 160 SGTGMKSVTGTPYWMSPEVISG-EGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN------------- 225 (263)
T ss_pred ccccccCCCcCccccCcceecc-CCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCC-------------
Confidence 111 23456788999999887 56899999999999999999999999876655554443221100
Q ss_pred ccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 365 ATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 365 ~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
......++..+.+||.+||..||.+|||+.++|+||||
T Consensus 226 --------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 226 --------------PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred --------------CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 01113578889999999999999999999999999998
No 142
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.3e-44 Score=360.23 Aligned_cols=253 Identities=23% Similarity=0.360 Sum_probs=207.1
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHH-HHHhcCCCCeeeecceeeecCCceEEEEEeec
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREIL-ILRRLDHPNIIKLEGLITSRLSCSIYLVFEYM 213 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~ 213 (478)
+.||+|+||+||++++..+++.||+|++..... .......+..|.. +++.++||||+++++++.. ...+|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~--~~~~~lv~e~~ 78 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT--TEKLYFVLDFV 78 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEec--CCEEEEEEcCC
Confidence 468999999999999999999999999975432 2233344455554 5677899999999998877 67899999999
Q ss_pred cCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccc
Q 011763 214 EHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRV 293 (478)
Q Consensus 214 ~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 293 (478)
.++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... ......+
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~~~~~ 157 (325)
T cd05604 79 NGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS-DTTTTFC 157 (325)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC-CCccccc
Confidence 987776666666689999999999999999999999999999999999999999999999999987532211 2224457
Q ss_pred cCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCC
Q 011763 294 VTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQP 373 (478)
Q Consensus 294 ~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 373 (478)
+|+.|+|||++.+ ..++.++|||||||++|+|++|.+||...+..+....+....-
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~----------------------- 213 (325)
T cd05604 158 GTPEYLAPEVIRK-QPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPL----------------------- 213 (325)
T ss_pred CChhhCCHHHHcC-CCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCc-----------------------
Confidence 8999999999876 6789999999999999999999999998877766665543100
Q ss_pred CCccchhcccCCchhHHHHHHHhcCCCCCCccCH----HHHHhCcccCCCCC
Q 011763 374 YDSSLRETFKDLPTTAVNLIETLLSVEPYKRATA----SAALASEYFSTKPY 421 (478)
Q Consensus 374 ~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta----~e~L~hp~f~~~~~ 421 (478)
...+.++..+.++|.+||..||.+||++ .++++||||....+
T Consensus 214 ------~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~ 259 (325)
T cd05604 214 ------VLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSW 259 (325)
T ss_pred ------cCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCH
Confidence 0013567889999999999999999976 59999999986443
No 143
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=7.2e-44 Score=386.24 Aligned_cols=262 Identities=26% Similarity=0.416 Sum_probs=215.3
Q ss_pred cccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEE
Q 011763 128 RADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 128 ~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
..++|++++.||+|+||+||+|++..++..||+|++............+..|+.+|+.|+|||||+++++|.......+|
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 36789999999999999999999999999999999987766666677888999999999999999999998776567899
Q ss_pred EEEeeccCCchhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHhC-------CceeccCCCCcEEEecC---------
Q 011763 208 LVFEYMEHDITGLLSC----PDIKFSEAQIKCYMNQLLHGLEHCHSR-------GVLHRDIKGSNLLVNNE--------- 267 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~----~~~~l~~~~~~~i~~qil~aL~~LH~~-------givHrDlkp~NILl~~~--------- 267 (478)
|||||++++.|..++. ....+++..++.|+.||+.||.|||+. +||||||||+||||+.+
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 9999999765544332 235799999999999999999999984 49999999999999642
Q ss_pred --------CcEEEeecccccccCCCCCCCccccccCCcccCcccccCC-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCh
Q 011763 268 --------GVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGA-TDYGPSVDLWSVGCVFAELLIGKPILQGRTE 338 (478)
Q Consensus 268 --------~~vkl~DFG~a~~~~~~~~~~~~~~~~t~~y~APE~l~~~-~~~~~~~DiwslG~il~elltG~~pf~~~~~ 338 (478)
+.+||+|||++...... .......+|+.|+|||++.+. ..++.++||||||||||+|++|..||...+.
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~--s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~ 248 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIE--SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN 248 (1021)
T ss_pred cccccCCCCceEEccCCcccccccc--ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence 34899999999765432 222345789999999998642 4588999999999999999999999987766
Q ss_pred HHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 339 VEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 339 ~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
...+...+...... .....+.++.+||..||..||.+||++.|+|.||||+.
T Consensus 249 ~~qli~~lk~~p~l----------------------------pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~ 300 (1021)
T PTZ00266 249 FSQLISELKRGPDL----------------------------PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKN 300 (1021)
T ss_pred HHHHHHHHhcCCCC----------------------------CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhh
Confidence 55544433211000 01246788999999999999999999999999999975
Q ss_pred C
Q 011763 419 K 419 (478)
Q Consensus 419 ~ 419 (478)
.
T Consensus 301 i 301 (1021)
T PTZ00266 301 V 301 (1021)
T ss_pred c
Confidence 4
No 144
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=8.9e-44 Score=356.11 Aligned_cols=293 Identities=35% Similarity=0.573 Sum_probs=233.7
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecC---Cce
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRL---SCS 205 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~---~~~ 205 (478)
.++|.+++.||+|+||+||++++..+++.||||.+............+.+|+.+++.++|+||+++++++.... ...
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 34799999999999999999999999999999998754333444556778999999999999999999886432 145
Q ss_pred EEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC
Q 011763 206 IYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH 285 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~ 285 (478)
+||||||+.+++...+. ....+++..+..++.||+.||.|||+++++|+||||+||+++.++.+||+|||++.......
T Consensus 84 ~~lv~e~~~~~L~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~ 162 (337)
T cd07858 84 VYIVYELMDTDLHQIIR-SSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG 162 (337)
T ss_pred EEEEEeCCCCCHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCc
Confidence 89999999877665554 34579999999999999999999999999999999999999999999999999997654321
Q ss_pred CCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 286 RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 286 ~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
.......++..|+|||++.+...++.++|||||||++|+|++|++||.+.+....+..+....+.++...|........
T Consensus 163 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07858 163 -DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA 241 (337)
T ss_pred -ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhh
Confidence 2223456788999999887545688999999999999999999999999988888888888888887666532211111
Q ss_pred cccCC--CCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCCCC
Q 011763 366 TLFKP--QQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYAC 423 (478)
Q Consensus 366 ~~~~~--~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~~~ 423 (478)
..+.. .......+...++.+++++.+||.+||+.||.+|||+.++|+||||.....+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~ 301 (337)
T cd07858 242 RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPS 301 (337)
T ss_pred hHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcc
Confidence 00000 00011122334567899999999999999999999999999999998754443
No 145
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1e-43 Score=372.28 Aligned_cols=261 Identities=23% Similarity=0.323 Sum_probs=217.4
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC-----
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS----- 203 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~----- 203 (478)
.++|++.+.||+|+||+||++++..+++.||||++............+.+|+.+|..++|+||+++++.+.....
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~ 110 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPEN 110 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCccc
Confidence 568999999999999999999999999999999998777666667778899999999999999999887753211
Q ss_pred -ceEEEEEeeccCCchhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccc
Q 011763 204 -CSIYLVFEYMEHDITGLLSC----PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLA 278 (478)
Q Consensus 204 -~~~~lv~e~~~~~ll~~~~~----~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a 278 (478)
..+++||||++++.+..+.. ....+++..+..++.||+.||.|||+++|+||||||+||||+.++.+||+|||++
T Consensus 111 ~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls 190 (496)
T PTZ00283 111 VLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFS 190 (496)
T ss_pred ceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccC
Confidence 24789999999765544332 2356899999999999999999999999999999999999999999999999999
Q ss_pred cccCCCC-CCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhh
Q 011763 279 NFSNTGH-RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYW 357 (478)
Q Consensus 279 ~~~~~~~-~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~ 357 (478)
+...... .......++|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+..+.+..+......
T Consensus 191 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~------ 263 (496)
T PTZ00283 191 KMYAATVSDDVGRTFCGTPYYVAPEIWRR-KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYD------ 263 (496)
T ss_pred eeccccccccccccccCCcceeCHHHhCC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCC------
Confidence 7654321 122344578999999999876 67899999999999999999999999988776666655431100
Q ss_pred ccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 358 KKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
.....+++++.+||.+||+.||.+||++.++|+|||++.
T Consensus 264 ----------------------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 264 ----------------------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL 302 (496)
T ss_pred ----------------------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence 011357889999999999999999999999999999864
No 146
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-45 Score=339.45 Aligned_cols=256 Identities=25% Similarity=0.334 Sum_probs=212.0
Q ss_pred ccceeee-eeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeec--CCc
Q 011763 129 ADAFEKL-EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSR--LSC 204 (478)
Q Consensus 129 ~~~y~~~-~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~--~~~ 204 (478)
+++|.+- ++||-|-.|.|..|.++.+++.+|+|++... ....+|+++.-.. .|||||.++++|... ...
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk 132 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-------PKARREVELHWMASGHPHIVSIIDVYENSYQGRK 132 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence 4567766 6799999999999999999999999998522 3456788887666 699999999999643 244
Q ss_pred eEEEEEeeccCCchhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecC---CcEEEeeccccc
Q 011763 205 SIYLVFEYMEHDITGLLSC--PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE---GVLKLADFGLAN 279 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~---~~vkl~DFG~a~ 279 (478)
.+.+|||.|+|+.|....+ ....|+|.++..|++||..|+.|||+.+|.||||||+|+|+... ..+||+|||+|+
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK 212 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAK 212 (400)
T ss_pred eeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccccc
Confidence 6789999999876655443 33469999999999999999999999999999999999999764 469999999998
Q ss_pred ccCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHHHcCCCCch
Q 011763 280 FSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTE----VEQLHKIFKLCGSPPDD 355 (478)
Q Consensus 280 ~~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~----~~~~~~i~~~~g~~~~~ 355 (478)
.... ...+.+.+-||.|.|||++-. ..|+..+|+||+||+||.|++|.|||..... ...-.+|.......|.+
T Consensus 213 ~t~~--~~~L~TPc~TPyYvaPevlg~-eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~p 289 (400)
T KOG0604|consen 213 ETQE--PGDLMTPCFTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEP 289 (400)
T ss_pred ccCC--CccccCCcccccccCHHHhCc-hhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCCh
Confidence 7654 244567788999999998764 7799999999999999999999999987653 23445555544455544
Q ss_pred hhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 356 YWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
.| ..++++++|+|+.||..+|.+|+|+.++++|||++..
T Consensus 290 EW-------------------------s~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~ 328 (400)
T KOG0604|consen 290 EW-------------------------SCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQY 328 (400)
T ss_pred hH-------------------------hHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence 44 5789999999999999999999999999999999864
No 147
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=7.9e-44 Score=348.07 Aligned_cols=261 Identities=23% Similarity=0.399 Sum_probs=209.0
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCC-hHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFE-PESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
.|++.+.||+|+||+||++.+..+++.||+|.+...... ......+.+|+.+++.++|+||+++++.+.. ...+|+|
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~--~~~~~lv 78 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYET--KDALCLV 78 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEec--CCEEEEE
Confidence 378899999999999999999999999999998755432 2334556789999999999999999998877 5689999
Q ss_pred EeeccCCchhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 210 FEYMEHDITGLLSC--PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 210 ~e~~~~~ll~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
|||++++.+..+.. ....+++..+..++.||+.||.|||+++|+||||||+||+++.++.++|+|||++.......
T Consensus 79 ~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 156 (285)
T cd05630 79 LTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-- 156 (285)
T ss_pred EEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc--
Confidence 99999865544432 23468999999999999999999999999999999999999999999999999987554322
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccc
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATL 367 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 367 (478)
......+++.|+|||++.+ ..++.++|||||||++|+|++|++||...................+.
T Consensus 157 ~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~------------- 222 (285)
T cd05630 157 TIKGRVGTVGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQE------------- 222 (285)
T ss_pred cccCCCCCccccChHHHcC-CCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhh-------------
Confidence 2234578999999999876 66899999999999999999999999875432211111111100000
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccC-----HHHHHhCcccCCCCC
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT-----ASAALASEYFSTKPY 421 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t-----a~e~L~hp~f~~~~~ 421 (478)
.....+++++.+||.+||+.||.+||| +.|+++||||+...+
T Consensus 223 ------------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~ 269 (285)
T cd05630 223 ------------EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINF 269 (285)
T ss_pred ------------hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCH
Confidence 011357888999999999999999999 999999999986433
No 148
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.7e-44 Score=356.41 Aligned_cols=253 Identities=23% Similarity=0.384 Sum_probs=205.3
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHH-HHHHhcCCCCeeeecceeeecCCceEEEEEeec
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREI-LILRRLDHPNIIKLEGLITSRLSCSIYLVFEYM 213 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~-~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~ 213 (478)
+.||+|+||+||+|++..+++.||+|++..... .......+..|+ .+++.++||||+++++++.+ ...+|+||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~--~~~~~lv~e~~ 78 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQT--AEKLYFVLDYV 78 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEc--CCEEEEEEcCC
Confidence 469999999999999999999999999975432 122233444454 46788999999999998877 67899999999
Q ss_pred cCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccc
Q 011763 214 EHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRV 293 (478)
Q Consensus 214 ~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 293 (478)
+++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... ......+
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~ 157 (321)
T cd05603 79 NGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-ETTSTFC 157 (321)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-Ccccccc
Confidence 987766655556678999999999999999999999999999999999999999999999999987532221 2233457
Q ss_pred cCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCC
Q 011763 294 VTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQP 373 (478)
Q Consensus 294 ~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 373 (478)
+|+.|+|||++.+ ..++.++|||||||++|+|++|.+||...+.......+... +.
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~---~~-------------------- 213 (321)
T cd05603 158 GTPEYLAPEVLRK-EPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK---PL-------------------- 213 (321)
T ss_pred CCcccCCHHHhcC-CCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC---CC--------------------
Confidence 8999999999876 67899999999999999999999999988766665555321 00
Q ss_pred CCccchhcccCCchhHHHHHHHhcCCCCCCccCH----HHHHhCcccCCCCC
Q 011763 374 YDSSLRETFKDLPTTAVNLIETLLSVEPYKRATA----SAALASEYFSTKPY 421 (478)
Q Consensus 374 ~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta----~e~L~hp~f~~~~~ 421 (478)
......+..+.++|.+||+.||.+|+++ .++++|+||....+
T Consensus 214 ------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~ 259 (321)
T cd05603 214 ------QLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINW 259 (321)
T ss_pred ------CCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCH
Confidence 0012467789999999999999999875 59999999986443
No 149
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=5.2e-44 Score=356.31 Aligned_cols=255 Identities=24% Similarity=0.418 Sum_probs=206.4
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCceEEEEEeec
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSCSIYLVFEYM 213 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~lv~e~~ 213 (478)
+.||+|+||+||++++..+++.||+|++..... .......+.+|+.++.++ +||||+++++++.. ...+||||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~~~~lv~e~~ 78 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT--TSRLFLVIEYV 78 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe--CCEEEEEEeCC
Confidence 469999999999999999999999999986543 234456677899999888 69999999999877 67899999999
Q ss_pred cCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccc
Q 011763 214 EHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRV 293 (478)
Q Consensus 214 ~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 293 (478)
+++.+..+......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ......+
T Consensus 79 ~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~ 157 (327)
T cd05617 79 NGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG-DTTSTFC 157 (327)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCC-Cceeccc
Confidence 987776655555679999999999999999999999999999999999999999999999999987532211 2234467
Q ss_pred cCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHcCCCCchhhccCCCCCccc
Q 011763 294 VTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRT------EVEQLHKIFKLCGSPPDDYWKKSKLPHATL 367 (478)
Q Consensus 294 ~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~------~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 367 (478)
+|+.|+|||++.+ ..++.++|||||||+||+|++|..||.... ..+.+.++... .+.
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~-------------- 220 (327)
T cd05617 158 GTPNYIAPEILRG-EEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE--KPI-------------- 220 (327)
T ss_pred CCcccCCHHHHCC-CCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh--CCC--------------
Confidence 8999999999876 678999999999999999999999996432 12222222110 000
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccC------HHHHHhCcccCCCCCC
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT------ASAALASEYFSTKPYA 422 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t------a~e~L~hp~f~~~~~~ 422 (478)
.....++..+.+||.+||+.||.+|++ ..++++||||+...|.
T Consensus 221 ------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~ 269 (327)
T cd05617 221 ------------RIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWD 269 (327)
T ss_pred ------------CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHH
Confidence 011256788999999999999999998 5799999999876543
No 150
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.3e-43 Score=354.82 Aligned_cols=289 Identities=39% Similarity=0.629 Sum_probs=231.2
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCceEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~ 207 (478)
.++|++.+.||+|+||.||+|.+..+++.||+|++............+.+|+.+++++ +||||+++++++........|
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 4689999999999999999999988999999999865433344455667899999999 999999999998765456789
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC-
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR- 286 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~- 286 (478)
+||||+++++...+... .+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++........
T Consensus 86 lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~ 163 (337)
T cd07852 86 LVFEYMETDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEEN 163 (337)
T ss_pred EEecccccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccccc
Confidence 99999998665555433 788999999999999999999999999999999999999999999999999976543221
Q ss_pred ---CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCC
Q 011763 287 ---QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP 363 (478)
Q Consensus 287 ---~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 363 (478)
.......+++.|+|||++.+...++.++|||||||++|+|++|++||.+....+....+....+.++...|.....+
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (337)
T cd07852 164 PENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSP 243 (337)
T ss_pred ccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhh
Confidence 12233467889999998876567889999999999999999999999999888888888888887776554432111
Q ss_pred Cccc-c-CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 364 HATL-F-KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 364 ~~~~-~-~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
.... . .........+...++.++.++.+||.+||+.||++|||+.++|+||||+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~ 301 (337)
T cd07852 244 FAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF 301 (337)
T ss_pred hHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence 0000 0 000111112233445688999999999999999999999999999999764
No 151
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3e-43 Score=348.80 Aligned_cols=267 Identities=29% Similarity=0.393 Sum_probs=218.9
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCCh-HHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEP-ESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
++|++.+.||+|+||+||+|.+..+++.||+|.+....... .....+.+|+++|+.++|+||+++++.+.. ....|+
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~l 78 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQT--ETYLCL 78 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeec--CCEEEE
Confidence 37999999999999999999999999999999998665432 355678889999999999999999999877 678999
Q ss_pred EEeeccCCchhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 209 VFEYMEHDITGLLSC--PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 209 v~e~~~~~ll~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
||||+.++.+..+.. ....+++..++.++.||+.||.|||+.|++|+||||+||+|+.++.++|+|||++........
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 158 (316)
T cd05574 79 VMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPP 158 (316)
T ss_pred EEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccc
Confidence 999998865555443 235799999999999999999999999999999999999999999999999999865432111
Q ss_pred ----------------------------CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCh
Q 011763 287 ----------------------------QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTE 338 (478)
Q Consensus 287 ----------------------------~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~ 338 (478)
.......+|..|+|||++.+ ..++.++|||||||++|+|++|..||.+.+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 159 PVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISG-DGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred ccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcC-CCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 01123467889999999876 6689999999999999999999999998887
Q ss_pred HHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccC----HHHHHhCc
Q 011763 339 VEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT----ASAALASE 414 (478)
Q Consensus 339 ~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t----a~e~L~hp 414 (478)
...+..+...-...+ ....++..+.+||.+||..||++||| +.++|.||
T Consensus 238 ~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~ 290 (316)
T cd05574 238 DETFSNILKKEVTFP---------------------------GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHP 290 (316)
T ss_pred HHHHHHHhcCCccCC---------------------------CccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCc
Confidence 766665542110000 01136889999999999999999999 99999999
Q ss_pred ccCCCCCCCCCC
Q 011763 415 YFSTKPYACDLS 426 (478)
Q Consensus 415 ~f~~~~~~~~~~ 426 (478)
||+...|+....
T Consensus 291 ~~~~~~~~~~~~ 302 (316)
T cd05574 291 FFRGVNWALIRH 302 (316)
T ss_pred hhhcCChhhccc
Confidence 999877655433
No 152
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.5e-43 Score=350.38 Aligned_cols=286 Identities=37% Similarity=0.658 Sum_probs=223.6
Q ss_pred ceeeeeeeeecCceEEEEEEECC--CCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLD--TGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~--~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
+|++.++||+|+||.||+|.+.. +++.||+|++..... .......+.+|+.++..++||||+++++++.+.....+|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 48999999999999999999988 899999999986431 122235567899999999999999999999885557899
Q ss_pred EEEeeccCCchhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEec----CCcEEEeeccccc
Q 011763 208 LVFEYMEHDITGLLSC----PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNN----EGVLKLADFGLAN 279 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~----~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~----~~~vkl~DFG~a~ 279 (478)
+||||+++++...+.. ....+++..++.++.||+.||.|||+++|+||||||+|||++. ++.+||+|||++.
T Consensus 81 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~ 160 (316)
T cd07842 81 LLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLAR 160 (316)
T ss_pred EEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcccc
Confidence 9999999877665432 2236899999999999999999999999999999999999999 8999999999997
Q ss_pred ccCCCCC--CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChH---------HHHHHHHHH
Q 011763 280 FSNTGHR--QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEV---------EQLHKIFKL 348 (478)
Q Consensus 280 ~~~~~~~--~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~---------~~~~~i~~~ 348 (478)
....... .......+++.|+|||++.+...++.++|||||||++|+|++|++||.+.... ..+..++..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (316)
T cd07842 161 LFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEV 240 (316)
T ss_pred ccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHH
Confidence 6543221 11233466889999999877567899999999999999999999999876532 467777888
Q ss_pred cCCCCchhhccCC-CCCccc---cCCCCCCC-ccchhcc---cCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 349 CGSPPDDYWKKSK-LPHATL---FKPQQPYD-SSLRETF---KDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 349 ~g~~~~~~~~~~~-~~~~~~---~~~~~~~~-~~l~~~~---~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
++.+....|.... .+.... ......+. ..+...+ ...+.++.++|.+||..||++|||+.|+++||||
T Consensus 241 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 241 LGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred hCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 8877776664321 111110 00011111 1222222 2678889999999999999999999999999998
No 153
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=4.3e-43 Score=352.02 Aligned_cols=287 Identities=36% Similarity=0.606 Sum_probs=229.4
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC----c
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS----C 204 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~----~ 204 (478)
.++|++++.||+|+||.||++.+..++..||||++............+.+|+.+|+.++||||+++++++..... .
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFH 93 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccc
Confidence 568999999999999999999999999999999986544334445567789999999999999999998865321 2
Q ss_pred eEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 205 SIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
.+|+||||+.+.+...+. ...+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 94 ~~~lv~e~~~~~l~~~~~--~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 171 (343)
T cd07880 94 DFYLVMPFMGTDLGKLMK--HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE 171 (343)
T ss_pred eEEEEEecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccC
Confidence 468999999665544443 246899999999999999999999999999999999999999999999999999755432
Q ss_pred CCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 285 HRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 285 ~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
.....+++.|+|||++.+...++.++|||||||++|+|++|++||...+.......++...+.++..++.......
T Consensus 172 ----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (343)
T cd07880 172 ----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSED 247 (343)
T ss_pred ----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchh
Confidence 2234568899999998764568899999999999999999999999988888888888877777766655433221
Q ss_pred ccccCC--CCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCC
Q 011763 365 ATLFKP--QQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPY 421 (478)
Q Consensus 365 ~~~~~~--~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~ 421 (478)
...+.. .......+....+.++..+.++|.+||+.||.+|||+.++|.||||+....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~ 306 (343)
T cd07880 248 AKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD 306 (343)
T ss_pred HHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence 111100 001111233344678889999999999999999999999999999987533
No 154
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.9e-43 Score=343.75 Aligned_cols=282 Identities=45% Similarity=0.776 Sum_probs=233.8
Q ss_pred eeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEe
Q 011763 132 FEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFE 211 (478)
Q Consensus 132 y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e 211 (478)
|++.+.||.|++|.||++.+..+++.+++|++............+.+|+.+|++++|+||+++++++.. ....++|||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v~e 78 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRH--KGDLYLVFE 78 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhcc--CCCEEEEEe
Confidence 678899999999999999999899999999998665554556677889999999999999999999877 577999999
Q ss_pred eccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccc
Q 011763 212 YMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTS 291 (478)
Q Consensus 212 ~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 291 (478)
|+++++...+......+++..+..++.||+.||.|||+++|+|+||||+||+++.++.++|+|||.+....... .....
T Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-~~~~~ 157 (283)
T cd05118 79 FMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-RPYTH 157 (283)
T ss_pred ccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-ccccC
Confidence 99998877776666689999999999999999999999999999999999999999999999999997665432 22233
Q ss_pred cccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCC-CCccccCC
Q 011763 292 RVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL-PHATLFKP 370 (478)
Q Consensus 292 ~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~-~~~~~~~~ 370 (478)
..++..|+|||.+.+...++.++|||||||++|+|++|+.||...+..+.+..+...++.+....|..... ........
T Consensus 158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05118 158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSF 237 (283)
T ss_pred ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhh
Confidence 45688899999987754789999999999999999999999999999999999988888887776655322 00000111
Q ss_pred CCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 371 QQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 371 ~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
.......+....+.++.++.+||.+||..||.+||++.++|.||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 238 PKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred ccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 1111112233445678999999999999999999999999999997
No 155
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.4e-43 Score=367.65 Aligned_cols=257 Identities=23% Similarity=0.346 Sum_probs=213.7
Q ss_pred ccceeeeeeeeecCceEEEEEEECCC-CcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDT-GKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~-~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
...|.+.+.||+|+||.||+|.+..+ ++.||+|.+..+ .......+.+|+.+|..++|||||++++++.. ...+|
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~--~~~~~ 141 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFKS--DDKLL 141 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEE--CCEEE
Confidence 44599999999999999999998777 788999987544 23444567789999999999999999999987 67899
Q ss_pred EEEeeccCCchhhcc----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCC
Q 011763 208 LVFEYMEHDITGLLS----CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNT 283 (478)
Q Consensus 208 lv~e~~~~~ll~~~~----~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~ 283 (478)
|||||++++.+.... ....++++..+..++.||+.||.|||+++|+||||||+||||+.++.+||+|||+++....
T Consensus 142 lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~ 221 (478)
T PTZ00267 142 LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSD 221 (478)
T ss_pred EEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCC
Confidence 999999986654322 2345789999999999999999999999999999999999999999999999999986543
Q ss_pred CCC-CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCC
Q 011763 284 GHR-QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL 362 (478)
Q Consensus 284 ~~~-~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 362 (478)
... ......++|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+......+
T Consensus 222 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~---------- 290 (478)
T PTZ00267 222 SVSLDVASSFCGTPYYLAPELWER-KRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDP---------- 290 (478)
T ss_pred ccccccccccCCCccccCHhHhCC-CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC----------
Confidence 221 12344568999999999876 678999999999999999999999999888777666654321100
Q ss_pred CCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 363 PHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
....++.++.+||.+||..||++||++.++|.|+|++.
T Consensus 291 ------------------~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 291 ------------------FPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred ------------------CCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 01246788999999999999999999999999999863
No 156
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.6e-43 Score=353.00 Aligned_cols=290 Identities=37% Similarity=0.585 Sum_probs=236.4
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecC---CceEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRL---SCSIY 207 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~---~~~~~ 207 (478)
+|++.+.||.|+||.||+|++..+++.||||++..........+.+.+|+.+++.++|+||+++++++.... ...+|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 589999999999999999999888999999998765433455667888999999999999999999987632 23689
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC-
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR- 286 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~- 286 (478)
+||||+++++...+.. ...+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||++........
T Consensus 81 lv~e~~~~~l~~~l~~-~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~ 159 (330)
T cd07834 81 IVTELMETDLHKVIKS-PQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE 159 (330)
T ss_pred EEecchhhhHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccc
Confidence 9999999766555544 34899999999999999999999999999999999999999999999999999986654321
Q ss_pred -CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 287 -QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 287 -~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
.......+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+....+.++...|........
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 239 (330)
T cd07834 160 KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKA 239 (330)
T ss_pred cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccch
Confidence 1233456788999999998744789999999999999999999999999999999999999999888776653222111
Q ss_pred cccC--CCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCC
Q 011763 366 TLFK--PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPY 421 (478)
Q Consensus 366 ~~~~--~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~ 421 (478)
..+. ........+...++.++..+.+||.+||++||.+|||+.++|.||||+....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 240 RNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred hhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 1110 0111122334445678999999999999999999999999999999986433
No 157
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=2.8e-43 Score=344.17 Aligned_cols=261 Identities=23% Similarity=0.392 Sum_probs=213.6
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCCh-HHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEP-ESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
.|+..+.||+|+||+||++.+..+++.||+|++....... .....+.+|+.+|+.++|+||+++++.+.. +...|+|
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~--~~~~~lv 78 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYET--KDALCLV 78 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEec--CCEEEEE
Confidence 3788899999999999999999999999999997654322 234456789999999999999999988877 6789999
Q ss_pred EeeccCCchhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 210 FEYMEHDITGLLSC--PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 210 ~e~~~~~ll~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
|||+.++.+..+.. ....+++..+..++.||+.||.|||++||+||||||+||++++++.++|+|||++...... .
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~--~ 156 (285)
T cd05632 79 LTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG--E 156 (285)
T ss_pred EEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC--C
Confidence 99999865544332 2346999999999999999999999999999999999999999999999999998654332 2
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccc
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATL 367 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 367 (478)
......++..|+|||++.+ ..++.++|||||||++|+|++|..||...........+.........
T Consensus 157 ~~~~~~g~~~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~------------- 222 (285)
T cd05632 157 SIRGRVGTVGYMAPEVLNN-QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEE------------- 222 (285)
T ss_pred cccCCCCCcCccChHHhcC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcccc-------------
Confidence 2234578999999999876 67899999999999999999999999987765554444332211111
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccC-----HHHHHhCcccCCCCC
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT-----ASAALASEYFSTKPY 421 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t-----a~e~L~hp~f~~~~~ 421 (478)
.....++.++.+||..||..||.+||+ +.+++.|+||+..++
T Consensus 223 ------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~ 269 (285)
T cd05632 223 ------------VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNF 269 (285)
T ss_pred ------------ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCH
Confidence 011357788999999999999999999 899999999987544
No 158
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2e-43 Score=354.39 Aligned_cols=290 Identities=36% Similarity=0.618 Sum_probs=235.0
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC----c
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS----C 204 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~----~ 204 (478)
.++|++.+.||.|+||.||+|++..+++.||+|++............+.+|+.+++.++|+||+++++++..... .
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ 93 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence 568999999999999999999999999999999987554344455667789999999999999999988765321 3
Q ss_pred eEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 205 SIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
..|+|+||+++++...+.. ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 94 ~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~ 171 (343)
T cd07851 94 DVYLVTHLMGADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE 171 (343)
T ss_pred cEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccc
Confidence 4899999997766555543 36899999999999999999999999999999999999999999999999999765432
Q ss_pred CCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 285 HRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 285 ~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
.....++..|+|||++.+...++.++|||||||++|+|++|+.||.+.+..+.+..+...++.+++.++.......
T Consensus 172 ----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 247 (343)
T cd07851 172 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSES 247 (343)
T ss_pred ----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchh
Confidence 2344668899999998764567899999999999999999999999999888999999988888887776544322
Q ss_pred ccccCCCC--CCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCCCCC
Q 011763 365 ATLFKPQQ--PYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYACD 424 (478)
Q Consensus 365 ~~~~~~~~--~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~~~~ 424 (478)
...+.... .....+...+..+++.+.+||.+||+.||.+|||+.++|.||||.....+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~~ 309 (343)
T cd07851 248 ARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPED 309 (343)
T ss_pred HHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCcc
Confidence 21111100 1111223334567899999999999999999999999999999987655443
No 159
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.6e-43 Score=344.43 Aligned_cols=256 Identities=23% Similarity=0.366 Sum_probs=201.7
Q ss_pred eeecCceEEEEEEECCCCcEEEEEEeecCCCCh-HHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeeccCC
Q 011763 138 IGQGTYSSVFRARDLDTGKIVALKKVRFDNFEP-ESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHD 216 (478)
Q Consensus 138 LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~~~ 216 (478)
||+|+||+||++++..+++.||+|++....... .....+..|+++++.++||||+++++++.. ..++|+||||+.++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~--~~~~~lv~e~~~g~ 78 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFES--KTHLCLVMSLMNGG 78 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEec--CCeEEEEEecCCCC
Confidence 689999999999999999999999997543322 223345569999999999999999998876 67899999999986
Q ss_pred chhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCcccccc
Q 011763 217 ITGLLS--CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVV 294 (478)
Q Consensus 217 ll~~~~--~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~ 294 (478)
.+..+. .....+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++....... ......+
T Consensus 79 ~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~ 156 (277)
T cd05607 79 DLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TITQRAG 156 (277)
T ss_pred CHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--eeeccCC
Confidence 654433 233458899999999999999999999999999999999999999999999999987654322 2234567
Q ss_pred CCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCC
Q 011763 295 TLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPY 374 (478)
Q Consensus 295 t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 374 (478)
++.|+|||++.+ ..++.++|||||||++|+|++|+.||...........+....-..
T Consensus 157 ~~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------- 213 (277)
T cd05607 157 TNGYMAPEILKE-EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLED---------------------- 213 (277)
T ss_pred CCCccCHHHHcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcc----------------------
Confidence 899999999876 558999999999999999999999997654322212221110000
Q ss_pred CccchhcccCCchhHHHHHHHhcCCCCCCccCH----HHHHhCcccCCCCCC
Q 011763 375 DSSLRETFKDLPTTAVNLIETLLSVEPYKRATA----SAALASEYFSTKPYA 422 (478)
Q Consensus 375 ~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta----~e~L~hp~f~~~~~~ 422 (478)
.+......++.++.+||.+||+.||.+||++ .+++.||||+...++
T Consensus 214 --~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~~ 263 (277)
T cd05607 214 --EVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFP 263 (277)
T ss_pred --ccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCHH
Confidence 0000113578899999999999999999999 778899999886553
No 160
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=5.7e-43 Score=351.01 Aligned_cols=286 Identities=35% Similarity=0.590 Sum_probs=228.8
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecC----Cc
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRL----SC 204 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----~~ 204 (478)
.++|.+.+.||+|+||.||+|++..+++.||+|++............+.+|+.+++.++||||+++++++.... ..
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 35899999999999999999999989999999998764433333456778999999999999999999886432 13
Q ss_pred eEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 205 SIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
.+|+|+||+...+.... ...+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||++......
T Consensus 94 ~~~lv~e~~~~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~ 170 (342)
T cd07879 94 DFYLVMPYMQTDLQKIM---GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE 170 (342)
T ss_pred eEEEEecccccCHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC
Confidence 56999999986544332 236899999999999999999999999999999999999999999999999998754321
Q ss_pred CCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 285 HRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 285 ~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
.....+++.|+|||++.+...++.++|||||||++|+|++|+.||.+.+....+..+....+.+.+.+++......
T Consensus 171 ----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (342)
T cd07879 171 ----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKA 246 (342)
T ss_pred ----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccc
Confidence 2334668899999998765568899999999999999999999999998888889998888888776665443221
Q ss_pred ccccCC--CCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCC
Q 011763 365 ATLFKP--QQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPY 421 (478)
Q Consensus 365 ~~~~~~--~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~ 421 (478)
...+.. .......+...++.++..+.+||.+||+.||.+||++.++|.||||.....
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 247 AKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred hHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 111100 001112233344567889999999999999999999999999999987543
No 161
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=8.9e-43 Score=334.43 Aligned_cols=255 Identities=24% Similarity=0.384 Sum_probs=211.3
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
.|++++.||.|++|.||++.+..+++.||+|++..+.......+.+.+|++++++++|+||+++++.+... ...+|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGE-DGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCC-CCEEEEEe
Confidence 48999999999999999999999999999999987655555666788899999999999999998877542 45689999
Q ss_pred eeccCCchhhcc-C-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 211 EYMEHDITGLLS-C-PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 211 e~~~~~ll~~~~-~-~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||++++.+.... . ....+++.+++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++....... ..
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~-~~ 158 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC-DM 158 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccC-Cc
Confidence 999876554433 2 23468999999999999999999999999999999999999999999999999997654322 22
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF 368 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 368 (478)
.....+++.|+|||++.+ ..++.++|||||||++|+|++|+.||...+.......+.... .+
T Consensus 159 ~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~--~~--------------- 220 (257)
T cd08223 159 ASTLIGTPYYMSPELFSN-KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGK--LP--------------- 220 (257)
T ss_pred cccccCCcCccChhHhcC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcC--CC---------------
Confidence 234467889999999876 678899999999999999999999998877655554443311 00
Q ss_pred CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 369 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 369 ~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
.....+++.+.+||.+||+.||.+|||+.++|+||||
T Consensus 221 -----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 221 -----------PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred -----------CCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0012577889999999999999999999999999997
No 162
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=4.4e-43 Score=341.06 Aligned_cols=282 Identities=45% Similarity=0.756 Sum_probs=232.1
Q ss_pred eeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEe
Q 011763 132 FEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFE 211 (478)
Q Consensus 132 y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e 211 (478)
|++.+.||.|+||.||+|++..+++.||+|++..........+.+..|+.+++.++|+||+++++++.. ....++|||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHT--ERKLYLVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhc--CCceEEEec
Confidence 677889999999999999999999999999998654334445667789999999999999999999887 578999999
Q ss_pred eccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccc
Q 011763 212 YMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTS 291 (478)
Q Consensus 212 ~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 291 (478)
|+++++...+......+++..+..++.||+.||.|||++||+|+||+|+||++++++.++|+|||++........ ....
T Consensus 79 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-~~~~ 157 (282)
T cd07829 79 YCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-TYTH 157 (282)
T ss_pred CcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc-ccCc
Confidence 999876666655445799999999999999999999999999999999999999999999999999976543221 2233
Q ss_pred cccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCC
Q 011763 292 RVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQ 371 (478)
Q Consensus 292 ~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 371 (478)
...+..|+|||++.+...++.++|||||||++|+|++|++||...+..+.+.++...++.+.+..|.....-........
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (282)
T cd07829 158 EVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFP 237 (282)
T ss_pred cccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccccccc
Confidence 45578899999987655789999999999999999999999999999999999999999988887765322110000011
Q ss_pred CCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 372 QPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 372 ~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
..........++.++..+.++|++||..||++||++.+++.||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 238 KFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred ccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 111122234456678899999999999999999999999999998
No 163
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5e-44 Score=352.96 Aligned_cols=266 Identities=28% Similarity=0.474 Sum_probs=215.0
Q ss_pred CcccccccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeec
Q 011763 123 GWVPLRADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSR 201 (478)
Q Consensus 123 ~~~~~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 201 (478)
.++.++...|+++++||.||.+.||++.. .+.+.||+|++.....+.....-+.+|+..|.+| .|.+||+|++|-..
T Consensus 354 ~~i~Vkg~~Yeilk~iG~GGSSkV~kV~~-s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~- 431 (677)
T KOG0596|consen 354 EIIKVKGREYEILKQIGSGGSSKVFKVLN-SDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT- 431 (677)
T ss_pred eeEEECcchhhHHHhhcCCCcceeeeeec-CCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc-
Confidence 45556678899999999999999999985 3456788888877777888888899999999999 69999999998877
Q ss_pred CCceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeeccccccc
Q 011763 202 LSCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFS 281 (478)
Q Consensus 202 ~~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~ 281 (478)
+.++||||||-+.+|...+.+....++.-.++.|..||+.++.++|++||||.||||.|+|+.. |.+||+|||.|...
T Consensus 432 -d~~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI 509 (677)
T KOG0596|consen 432 -DGYLYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVK-GRLKLIDFGIANAI 509 (677)
T ss_pred -CceEEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEe-eeEEeeeechhccc
Confidence 7899999999999988888776666665689999999999999999999999999999999974 89999999999877
Q ss_pred CCCCCCC-ccccccCCcccCcccccCC----------CCCCChhhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHc
Q 011763 282 NTGHRQP-LTSRVVTLWYRPPELLLGA----------TDYGPSVDLWSVGCVFAELLIGKPILQGRT-EVEQLHKIFKLC 349 (478)
Q Consensus 282 ~~~~~~~-~~~~~~t~~y~APE~l~~~----------~~~~~~~DiwslG~il~elltG~~pf~~~~-~~~~~~~i~~~~ 349 (478)
..+.... ..+.+||+.||+||.+... -..+.++||||||||||+|+.|++||.... ....+..|.+
T Consensus 510 ~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~-- 587 (677)
T KOG0596|consen 510 QPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITD-- 587 (677)
T ss_pred CccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcC--
Confidence 6554322 2356899999999998531 125679999999999999999999998543 2222222211
Q ss_pred CCCCchhhccCCCCCccccCCCCCCCccchhcccCCc--hhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCC
Q 011763 350 GSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLP--TTAVNLIETLLSVEPYKRATASAALASEYFSTKP 420 (478)
Q Consensus 350 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~ 420 (478)
|.. .-.|+.++ .+++++++.||.+||.+|||+.++|+|||+.-.+
T Consensus 588 --P~~------------------------~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~~ 634 (677)
T KOG0596|consen 588 --PNH------------------------EIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQP 634 (677)
T ss_pred --CCc------------------------cccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCccccccc
Confidence 111 11123332 2389999999999999999999999999987533
No 164
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=3.2e-43 Score=352.05 Aligned_cols=255 Identities=22% Similarity=0.349 Sum_probs=199.2
Q ss_pred cccceeeeeeeeecCceEEEEEEEC-----CCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeec
Q 011763 128 RADAFEKLEKIGQGTYSSVFRARDL-----DTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSR 201 (478)
Q Consensus 128 ~~~~y~~~~~LG~G~~g~V~~~~~~-----~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 201 (478)
..++|++.+.||.|+||.||+|.+. .++..||||++.... .......+.+|+.+|..+ +||||+++++++...
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA-TASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc-chHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 3578999999999999999999752 345789999987432 334456788999999999 899999999988653
Q ss_pred CCceEEEEEeeccCCchhhccCC---------------------------------------------------------
Q 011763 202 LSCSIYLVFEYMEHDITGLLSCP--------------------------------------------------------- 224 (478)
Q Consensus 202 ~~~~~~lv~e~~~~~ll~~~~~~--------------------------------------------------------- 224 (478)
...+|+||||++++.+..+...
T Consensus 84 -~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (338)
T cd05102 84 -NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQE 162 (338)
T ss_pred -CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchh
Confidence 4568999999998655433221
Q ss_pred -----CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC-CCccccccCCcc
Q 011763 225 -----DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-QPLTSRVVTLWY 298 (478)
Q Consensus 225 -----~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~-~~~~~~~~t~~y 298 (478)
..++++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... .......+++.|
T Consensus 163 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 163 TDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 12478889999999999999999999999999999999999999999999999975432211 111223446789
Q ss_pred cCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCcc
Q 011763 299 RPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSS 377 (478)
Q Consensus 299 ~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (478)
+|||++.+ ..++.++|||||||+||||++ |..||.+....+.+...+.. +..+
T Consensus 243 ~aPE~~~~-~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~-~~~~------------------------ 296 (338)
T cd05102 243 MAPESIFD-KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKD-GTRM------------------------ 296 (338)
T ss_pred cCcHHhhc-CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhc-CCCC------------------------
Confidence 99999876 678999999999999999997 99999876544433332221 0000
Q ss_pred chhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 378 LRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 378 l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
.....+++++.+||.+||..||.+|||+.++++
T Consensus 297 --~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 297 --RAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred --CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 001256788999999999999999999999984
No 165
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=6.8e-43 Score=348.23 Aligned_cols=281 Identities=23% Similarity=0.334 Sum_probs=207.3
Q ss_pred eeeeeeec--CceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEe
Q 011763 134 KLEKIGQG--TYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFE 211 (478)
Q Consensus 134 ~~~~LG~G--~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e 211 (478)
+++.||+| +|++||++.+..+++.||+|+++.+.......+.+.+|+.+++.++||||+++++++.. ....|+|||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~--~~~~~lv~e 79 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIA--DNELWVVTS 79 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEE--CCEEEEEEe
Confidence 56789999 78999999999999999999998765555566778889999999999999999999987 677999999
Q ss_pred eccCCchhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC---
Q 011763 212 YMEHDITGLLSCP--DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR--- 286 (478)
Q Consensus 212 ~~~~~ll~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~--- 286 (478)
|++++.+..+... ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.++|+||+.+........
T Consensus 80 ~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~ 159 (327)
T cd08227 80 FMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLR 159 (327)
T ss_pred ccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccccc
Confidence 9998766555432 34589999999999999999999999999999999999999999999999986543211100
Q ss_pred ---CCccccccCCcccCcccccCC-CCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCc--------
Q 011763 287 ---QPLTSRVVTLWYRPPELLLGA-TDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPD-------- 354 (478)
Q Consensus 287 ---~~~~~~~~t~~y~APE~l~~~-~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~-------- 354 (478)
.......++..|+|||++.+. ..++.++|||||||++|+|++|+.||.............. +..+.
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 237 (327)
T cd08227 160 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLN--GTVPCLLDTTTIP 237 (327)
T ss_pred ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhc--CCccccccccchh
Confidence 001122456779999998753 3588999999999999999999999987655443333222 11110
Q ss_pred --hhhccC-------CCCCccccCCCC--CCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 355 --DYWKKS-------KLPHATLFKPQQ--PYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 355 --~~~~~~-------~~~~~~~~~~~~--~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
+..... ............ ............+++.+.+||.+||++||++|||+.++|+||||+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~ 312 (327)
T cd08227 238 AEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 312 (327)
T ss_pred hhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence 000000 000000000000 0000111122356788999999999999999999999999999975
No 166
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=9.5e-43 Score=341.10 Aligned_cols=257 Identities=28% Similarity=0.430 Sum_probs=216.5
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
++|++.+.||.|+||.||++.+..+++.||+|++..... .....+.+.+|+++|++++||||+++++++.. ...+|+
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~ 78 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQD--DSNLYL 78 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEc--CCeEEE
Confidence 379999999999999999999999999999999875432 23445678889999999999999999999877 678999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||||++++.+..+......+++..+..++.||+.||.|||++||+|+||+|.||||+.++.+||+|||++......
T Consensus 79 v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---- 154 (290)
T cd05580 79 VMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---- 154 (290)
T ss_pred EEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC----
Confidence 9999987666555555568999999999999999999999999999999999999999999999999999765433
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF 368 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 368 (478)
.....+++.|+|||.+.+ ..++.++||||||+++|+|++|+.||...+..+...++... .++
T Consensus 155 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~--------------- 216 (290)
T cd05580 155 TYTLCGTPEYLAPEIILS-KGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG--KVR--------------- 216 (290)
T ss_pred CCCCCCCccccChhhhcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--Ccc---------------
Confidence 233467889999998876 56788999999999999999999999887765555555421 110
Q ss_pred CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCcc-----CHHHHHhCcccCCCCCC
Q 011763 369 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRA-----TASAALASEYFSTKPYA 422 (478)
Q Consensus 369 ~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~-----ta~e~L~hp~f~~~~~~ 422 (478)
....++..+.++|.+||..||.+|+ ++.++++||||....+.
T Consensus 217 ------------~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~ 263 (290)
T cd05580 217 ------------FPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWI 263 (290)
T ss_pred ------------CCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCHH
Confidence 0124578899999999999999999 99999999999876543
No 167
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=8.2e-43 Score=344.71 Aligned_cols=279 Identities=25% Similarity=0.330 Sum_probs=212.5
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
++|++.+.||+|+||.||++.+..++..||+|.+..+. .......+.+|++++++++||||+++++++.. ...+|+|
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 77 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYS--DGEISIC 77 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee--CCEEEEE
Confidence 36999999999999999999999999999999987543 34455668889999999999999999999987 6789999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
|||++++.+..+......+++..+..++.||+.||.|||+ ++++|+||||+|||++.++.+||+|||++...... .
T Consensus 78 ~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---~ 154 (308)
T cd06615 78 MEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---M 154 (308)
T ss_pred eeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc---c
Confidence 9999987776666555679999999999999999999997 59999999999999999999999999998654322 1
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchh-hccCCCCCccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDY-WKKSKLPHATL 367 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~-~~~~~~~~~~~ 367 (478)
.....+++.|+|||++.+ ..++.++|||||||++|+|++|+.||...+.... ..++. ..+... +..........
T Consensus 155 ~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~ 229 (308)
T cd06615 155 ANSFVGTRSYMSPERLQG-THYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKEL-EAMFG---RPVSEGEAKESHRPVSGH 229 (308)
T ss_pred cccCCCCcCccChhHhcC-CCCCccchHHHHHHHHHHHHhCCCCCCCcchhhH-HHhhc---CccccccccCCcccccCC
Confidence 234567889999998876 5688999999999999999999999987654332 22221 111000 00000000000
Q ss_pred cCCCCC---CCcc---------chhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 368 FKPQQP---YDSS---------LRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 368 ~~~~~~---~~~~---------l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
..+... .... .......++.++.+||.+||..||++|||+.++|+||||...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 230 PPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred CCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 000000 0000 000011367789999999999999999999999999999764
No 168
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.8e-43 Score=366.90 Aligned_cols=286 Identities=23% Similarity=0.301 Sum_probs=206.2
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCC-cEEEEEEe--------------ec-CCCChHHHHHHHHHHHHHHhcCCCCee
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTG-KIVALKKV--------------RF-DNFEPESVRFMAREILILRRLDHPNII 192 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~-~~vAlK~~--------------~~-~~~~~~~~~~~~~E~~~l~~l~h~nIv 192 (478)
.++|++++.||+|+||+||+|..+... ..+++|.+ .+ ..........+.+|+.+|++++|||||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 458999999999999999998754322 22222211 00 011223445677899999999999999
Q ss_pred eecceeeecCCceEEEEEeeccCCchhhccCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCC
Q 011763 193 KLEGLITSRLSCSIYLVFEYMEHDITGLLSCP----DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG 268 (478)
Q Consensus 193 ~l~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~ 268 (478)
++++++.. ....|+|++++.+.++..+... ........++.++.||+.||.|||++|||||||||+||||+.++
T Consensus 227 ~l~~~~~~--~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~ 304 (501)
T PHA03210 227 KIEEILRS--EANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDG 304 (501)
T ss_pred cEeEEEEE--CCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence 99999987 5678999999988777655432 12234667889999999999999999999999999999999999
Q ss_pred cEEEeecccccccCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCC-CCC--CChHHHHHHH
Q 011763 269 VLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPI-LQG--RTEVEQLHKI 345 (478)
Q Consensus 269 ~vkl~DFG~a~~~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~p-f~~--~~~~~~~~~i 345 (478)
.+||+|||++...............+|+.|+|||++.+ ..++.++|||||||+||||++|..+ |.. .....++.++
T Consensus 305 ~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~ 383 (501)
T PHA03210 305 KIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAG-DGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKI 383 (501)
T ss_pred CEEEEeCCCceecCcccccccccccCCcCCCCchhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHH
Confidence 99999999998765433333344678999999999886 6789999999999999999998754 432 2345566666
Q ss_pred HHHcCCCCchhhcc----CCCCCccccCCCCCCCccchhcc--cCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 346 FKLCGSPPDDYWKK----SKLPHATLFKPQQPYDSSLRETF--KDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 346 ~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
+..++.+..++... .......... .....+...+ ..++.++.++|.+||++||.+|||+.|+|.||||+..
T Consensus 384 ~~~~~~~~~~~p~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 384 IDSLSVCDEEFPDPPCKLFDYIDSAEID---HAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE 460 (501)
T ss_pred HHhcccChhhcCCcHHHHHHHhhhhhcc---cCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence 66555443322110 0000000000 0001111111 2467889999999999999999999999999999864
Q ss_pred C
Q 011763 420 P 420 (478)
Q Consensus 420 ~ 420 (478)
.
T Consensus 461 ~ 461 (501)
T PHA03210 461 E 461 (501)
T ss_pred C
Confidence 3
No 169
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.6e-42 Score=332.25 Aligned_cols=254 Identities=26% Similarity=0.379 Sum_probs=213.8
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
+|++.+.||+|++|.||++.+..+++.|++|.+............+.+|+.+++.++||||+++++++.. ....|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 78 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLD--KGKLNIVM 78 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeecc--CCEEEEEE
Confidence 4889999999999999999999999999999998766666667788899999999999999999999877 57899999
Q ss_pred eeccCCchhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 211 EYMEHDITGLLSCP--DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 211 e~~~~~ll~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||++++.+..+... ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++....... ..
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~-~~ 157 (256)
T cd08529 79 EYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT-NF 157 (256)
T ss_pred EeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc-ch
Confidence 99987655544322 4578999999999999999999999999999999999999999999999999987655432 12
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF 368 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 368 (478)
.....+++.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+....+......+
T Consensus 158 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------------- 220 (256)
T cd08529 158 ANTIVGTPYYLSPELCED-KPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPP---------------- 220 (256)
T ss_pred hhccccCccccCHHHhcC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC----------------
Confidence 233467889999999876 568899999999999999999999999888666555543311100
Q ss_pred CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 369 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 369 ~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
....++..+.++|.+||+.+|++||++.++|+|||+
T Consensus 221 ------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 221 ------------VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred ------------CccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 012467889999999999999999999999999995
No 170
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.2e-42 Score=348.67 Aligned_cols=286 Identities=36% Similarity=0.592 Sum_probs=220.6
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC------
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS------ 203 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~------ 203 (478)
.+|++.+.||.|+||.||+|.+..+++.||+|++..... ...+.+.+|+.+++.++||||+++++++.....
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDV 82 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccc
Confidence 589999999999999999999999999999999876543 445667889999999999999999987754322
Q ss_pred ------ceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEec-CCcEEEeecc
Q 011763 204 ------CSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNN-EGVLKLADFG 276 (478)
Q Consensus 204 ------~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~-~~~vkl~DFG 276 (478)
...|+||||+++++...+. ...+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||
T Consensus 83 ~~~~~~~~~~lv~e~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg 160 (342)
T cd07854 83 GSLTELNSVYIVQEYMETDLANVLE--QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFG 160 (342)
T ss_pred ccccccceEEEEeecccccHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcc
Confidence 3579999999976555443 236899999999999999999999999999999999999974 5678999999
Q ss_pred cccccCCCCC--CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCc
Q 011763 277 LANFSNTGHR--QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPD 354 (478)
Q Consensus 277 ~a~~~~~~~~--~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~ 354 (478)
++........ .......++..|+|||++.....++.++|||||||++|+|++|+.||...+..+....+.........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 240 (342)
T cd07854 161 LARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVRE 240 (342)
T ss_pred cceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 9976532211 11122356889999998766567889999999999999999999999988888777777665444333
Q ss_pred hhhccCCCC-CccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 355 DYWKKSKLP-HATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 355 ~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
..+...... ..............+....+.++.++.+||.+||..||.+|||+.++|.||||+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~ 306 (342)
T cd07854 241 EDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCY 306 (342)
T ss_pred HHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccc
Confidence 222111000 00000011112222334456788999999999999999999999999999999864
No 171
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.8e-42 Score=347.88 Aligned_cols=287 Identities=34% Similarity=0.581 Sum_probs=226.9
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecC----Cc
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRL----SC 204 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----~~ 204 (478)
.++|++.+.||+|+||.||++.+..+++.||+|++..........+.+.+|+.++++++||||+++++++.... ..
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 95 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccc
Confidence 47899999999999999999999999999999999765433444566778999999999999999999885421 23
Q ss_pred eEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 205 SIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
..|++++++.+.+...+.. ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 96 ~~~lv~~~~~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~- 172 (345)
T cd07877 96 DVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD- 172 (345)
T ss_pred cEEEEehhcccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccccc-
Confidence 5789999886665444432 3589999999999999999999999999999999999999999999999999875432
Q ss_pred CCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 285 HRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 285 ~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
......++..|+|||++.+...++.++|||||||++|+|++|++||...+....+..+....+.++...+.......
T Consensus 173 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (345)
T cd07877 173 ---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 249 (345)
T ss_pred ---cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHh
Confidence 22334668899999988765668899999999999999999999999888888888888888877766654432211
Q ss_pred ccccCC--CCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCC
Q 011763 365 ATLFKP--QQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPY 421 (478)
Q Consensus 365 ~~~~~~--~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~ 421 (478)
...+.. .......+...+...+..+.+||.+||+.||.+|||+.++|.||||++...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~ 308 (345)
T cd07877 250 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 308 (345)
T ss_pred HHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCC
Confidence 000000 000011122223356788999999999999999999999999999987433
No 172
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.7e-42 Score=337.46 Aligned_cols=256 Identities=25% Similarity=0.357 Sum_probs=207.1
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
++|++++.||+|+||.||++.+..+++.||+|++..+. .......+.+|+.++.+++||||+++++++.. ....++|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 77 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI-TVELQKQIMSELEILYKCDSPYIIGFYGAFFV--ENRISIC 77 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC-ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE--CCEEEEE
Confidence 36899999999999999999999999999999997653 34455678889999999999999999999987 5678999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL 289 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 289 (478)
|||++++.+.... .+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++...... ..
T Consensus 78 ~e~~~~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---~~ 150 (279)
T cd06619 78 TEFMDGGSLDVYR----KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---IA 150 (279)
T ss_pred EecCCCCChHHhh----cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc---cc
Confidence 9999998775442 5789999999999999999999999999999999999999999999999999755432 22
Q ss_pred cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHcCCCCchhhccCCCCCcc
Q 011763 290 TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQ---LHKIFKLCGSPPDDYWKKSKLPHAT 366 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~---~~~i~~~~g~~~~~~~~~~~~~~~~ 366 (478)
....+|..|+|||++.+ ..++.++|||||||++|+|++|+.||......+. ..............
T Consensus 151 ~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~----------- 218 (279)
T cd06619 151 KTYVGTNAYMAPERISG-EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPP----------- 218 (279)
T ss_pred cCCCCChhhcCceeecC-CCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCC-----------
Confidence 34577899999999886 6689999999999999999999999975322110 01111111000000
Q ss_pred ccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 367 LFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 367 ~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
......+++++.+||.+||+.||.+||++.++|.||||...
T Consensus 219 ------------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~ 259 (279)
T cd06619 219 ------------VLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQY 259 (279)
T ss_pred ------------CCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccc
Confidence 00012467889999999999999999999999999999763
No 173
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.1e-42 Score=341.22 Aligned_cols=270 Identities=26% Similarity=0.371 Sum_probs=218.1
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
++|++++.||+|+||.||++.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++.+.. ..++|+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~l 78 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFET--KRHLCM 78 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEec--CCEEEE
Confidence 379999999999999999999999999999999876543 22344567789999999999999999998876 678999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC--
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-- 286 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~-- 286 (478)
||||++++.+..+......+++..+..++.|++.||.|||+++|+|+||||+||+++.++.++|+|||+++.......
T Consensus 79 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~ 158 (305)
T cd05609 79 VMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN 158 (305)
T ss_pred EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence 999999877766665556799999999999999999999999999999999999999999999999999864211100
Q ss_pred ------------CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCc
Q 011763 287 ------------QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPD 354 (478)
Q Consensus 287 ------------~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~ 354 (478)
.......++..|+|||.+.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+.......+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (305)
T cd05609 159 LYEGHIEKDTREFLDKQVCGTPEYIAPEVILR-QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE 237 (305)
T ss_pred ccccccccchhhccccCCccCccccCchhccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCC
Confidence 00112346788999999876 66899999999999999999999999987776666555432111110
Q ss_pred hhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccC---HHHHHhCcccCCCCCCCCCCCC
Q 011763 355 DYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT---ASAALASEYFSTKPYACDLSSL 428 (478)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t---a~e~L~hp~f~~~~~~~~~~~~ 428 (478)
....++.++.+||.+||+.||++||+ +.++|+||||...++......+
T Consensus 238 --------------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~~~~~~~~ 288 (305)
T cd05609 238 --------------------------GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWNGLLRQK 288 (305)
T ss_pred --------------------------ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCHHHHhhcC
Confidence 00247888999999999999999998 8999999999876655433333
No 174
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-44 Score=359.34 Aligned_cols=260 Identities=25% Similarity=0.395 Sum_probs=221.1
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.+.++|+..||.|+||.||+|.++.++...|.|+|... ..+..+.+.-||.||..++||+||+|++.|.. .+.++|
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk--seEELEDylVEIeILa~CdHP~ivkLl~ayy~--enkLwi 106 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK--SEEELEDYLVEIEILAECDHPVIVKLLSAYYF--ENKLWI 106 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc--chhHHhhhhhhhhhhhcCCChHHHHHHHHHhc--cCceEE
Confidence 34688999999999999999999999999999998644 45667888889999999999999999998877 567999
Q ss_pred EEeeccCCchhhc-cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 209 VFEYMEHDITGLL-SCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 209 v~e~~~~~ll~~~-~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
+.|||+|+-.+.+ ..-+..|++.++..+++|++.||.|||+++|||||||..|||++-+|.++|+|||.+..... ..+
T Consensus 107 liEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~-t~q 185 (1187)
T KOG0579|consen 107 LIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS-TRQ 185 (1187)
T ss_pred EEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchh-HHh
Confidence 9999999765543 44566899999999999999999999999999999999999999999999999999854322 233
Q ss_pred CccccccCCcccCccccc----CCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCC
Q 011763 288 PLTSRVVTLWYRPPELLL----GATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP 363 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~----~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 363 (478)
...+++|||.|||||+++ ...+|+.++||||||++|.||..+.||-...+....+.+|... .|+...
T Consensus 186 kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS---ePPTLl------ 256 (1187)
T KOG0579|consen 186 KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---EPPTLL------ 256 (1187)
T ss_pred hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc---CCCccc------
Confidence 446789999999999975 3478999999999999999999999999998888888777542 111110
Q ss_pred CccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 364 HATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 364 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
.....+..+.|||.+||..||..||++.++|+||||++.
T Consensus 257 -----------------qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~ 295 (1187)
T KOG0579|consen 257 -----------------QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNA 295 (1187)
T ss_pred -----------------CcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccC
Confidence 012457789999999999999999999999999999863
No 175
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=3.8e-42 Score=343.60 Aligned_cols=288 Identities=33% Similarity=0.549 Sum_probs=228.2
Q ss_pred ceeeeeeeeecCceEEEEEEECCC--CcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeee--cCCce
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDT--GKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITS--RLSCS 205 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~--~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~--~~~~~ 205 (478)
+|++.+.||.|+||.||++++..+ +..||+|++............+.+|+.+++++ +||||+++++.+.. .....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 488999999999999999999887 89999999875433334456677899999999 69999999886542 22356
Q ss_pred EEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC
Q 011763 206 IYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH 285 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~ 285 (478)
+|+++||+++++...+. ....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 ~~~~~e~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~ 159 (332)
T cd07857 81 LYLYEELMEADLHQIIR-SGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENP 159 (332)
T ss_pred EEEEEecccCCHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccccc
Confidence 88999999887666554 34578999999999999999999999999999999999999999999999999997554321
Q ss_pred C---CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCC
Q 011763 286 R---QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL 362 (478)
Q Consensus 286 ~---~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 362 (478)
. .......+|+.|+|||++.+...++.++|||||||++|+|++|.+||...+....+..++..++.++...+.....
T Consensus 160 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (332)
T cd07857 160 GENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGS 239 (332)
T ss_pred ccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhh
Confidence 1 1123346789999999887656789999999999999999999999999999999999999999888766554322
Q ss_pred CCcccc-CCC-CCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 363 PHATLF-KPQ-QPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 363 ~~~~~~-~~~-~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
+..... ... ......+...++.++..+.+||.+||+.||.+|||+.++|.||||.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~ 298 (332)
T cd07857 240 PKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIW 298 (332)
T ss_pred hhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence 211100 000 000111223345568899999999999999999999999999999754
No 176
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2.5e-42 Score=333.68 Aligned_cols=258 Identities=28% Similarity=0.457 Sum_probs=208.0
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC---ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF---EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
+|++.+.||+|+||.||++.+..++..||+|++..... .......+.+|+.+++.++||||+++++++.......++
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 69999999999999999999999999999999875432 223456678899999999999999999988765567789
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC--
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH-- 285 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~-- 285 (478)
++|||++++.+.........+++..++.++.||+.||.|||+++|+|+||+|+||+++.++.+||+|||++.......
T Consensus 83 l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 162 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMS 162 (266)
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccccc
Confidence 999999986665555555578999999999999999999999999999999999999999999999999987543211
Q ss_pred CCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 286 RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 286 ~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
........++..|+|||++.+ ..++.++|||||||++|+|++|+.||........+.++.... ..+
T Consensus 163 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~-~~~------------ 228 (266)
T cd06651 163 GTGIRSVTGTPYWMSPEVISG-EGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQP-TNP------------ 228 (266)
T ss_pred CCccccCCccccccCHHHhCC-CCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCC-CCC------------
Confidence 111122456888999999876 668899999999999999999999998765544444332110 000
Q ss_pred cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccC
Q 011763 366 TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFS 417 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~ 417 (478)
.....+++.+.+|| +||..||++||++.|+|+||||+
T Consensus 229 --------------~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 229 --------------QLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred --------------CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 00124577788898 67778999999999999999996
No 177
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=4.9e-42 Score=342.26 Aligned_cols=285 Identities=36% Similarity=0.602 Sum_probs=229.6
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|++++.||.|+||.||++.+..+++.||+|++..........+.+.+|+.+++.++||||++++++|... ....|+
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-~~~~~l 87 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP-LEDIYF 87 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC-CCcEEE
Confidence 5689999999999999999999999999999999876544444456677899999999999999999988653 346889
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||||+++.+...+.. ..+++..+..++.||+.||.|||+++|+|+||+|.|||+++++.++|+|||++......
T Consensus 88 v~e~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~---- 161 (328)
T cd07856 88 VTELLGTDLHRLLTS--RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQ---- 161 (328)
T ss_pred EeehhccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCC----
Confidence 999998765544432 35789999999999999999999999999999999999999999999999998754321
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF 368 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 368 (478)
.....+++.|+|||++.+...++.++|||||||++|+|++|++||...........+.+.++.++++++..........+
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (328)
T cd07856 162 MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRF 241 (328)
T ss_pred cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHH
Confidence 23345688899999886646789999999999999999999999999888888888888899988777654322111100
Q ss_pred CCC--CCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCC
Q 011763 369 KPQ--QPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKP 420 (478)
Q Consensus 369 ~~~--~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~ 420 (478)
... ........+.++.+++.+.++|.+||+.||++|||+.++|.||||....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~ 295 (328)
T cd07856 242 VQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYH 295 (328)
T ss_pred HhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCcccccc
Confidence 000 0011112233456789999999999999999999999999999997543
No 178
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=3.5e-42 Score=337.35 Aligned_cols=260 Identities=27% Similarity=0.422 Sum_probs=212.3
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.+.|+++++||.|+||.||++++..+++.|++|++... .....+.+.+|+.+++.++|+||+++++.+.. ...+|+
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l 86 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYW--DGKLWI 86 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe--CCeEEE
Confidence 35799999999999999999999999999999998754 34556678889999999999999999999877 567999
Q ss_pred EEeeccCCchhhc-cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 209 VFEYMEHDITGLL-SCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 209 v~e~~~~~ll~~~-~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
||||++++.+..+ ......+++..+..++.||+.+|.|||+++|+|+||||+||+++.++.++|+|||++....... .
T Consensus 87 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-~ 165 (292)
T cd06644 87 MIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL-Q 165 (292)
T ss_pred EEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccc-c
Confidence 9999998766544 3344578999999999999999999999999999999999999999999999999986543221 2
Q ss_pred CccccccCCcccCcccccC----CCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCC
Q 011763 288 PLTSRVVTLWYRPPELLLG----ATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP 363 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~----~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 363 (478)
......+++.|+|||++.+ ...++.++|||||||++|+|++|.+||...+......++.... ++ ..
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~--~~-~~------- 235 (292)
T cd06644 166 RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE--PP-TL------- 235 (292)
T ss_pred ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCC--Cc-cC-------
Confidence 2233456889999998852 2457889999999999999999999998776655544442210 00 00
Q ss_pred CccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 364 HATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 364 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
.....++.++.+||.+||..||++||++.++|+||||...
T Consensus 236 ----------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 275 (292)
T cd06644 236 ----------------SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSV 275 (292)
T ss_pred ----------------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 0012567789999999999999999999999999999763
No 179
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-43 Score=350.27 Aligned_cols=250 Identities=24% Similarity=0.405 Sum_probs=210.3
Q ss_pred ccccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceE
Q 011763 127 LRADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSI 206 (478)
Q Consensus 127 ~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 206 (478)
+..+.+++++.||+|-||.||+|.... ...||+|.++...+.. +.+.+|+++|++|+|+|||++++++.. ++.+
T Consensus 203 i~r~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m~~---~~f~~Ea~iMk~L~H~~lV~l~gV~~~--~~pi 276 (468)
T KOG0197|consen 203 IPREELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSMSP---EAFLREAQIMKKLRHEKLVKLYGVCTK--QEPI 276 (468)
T ss_pred ecHHHHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccccCh---hHHHHHHHHHHhCcccCeEEEEEEEec--CCce
Confidence 345568889999999999999999753 4479999998654433 456699999999999999999999987 4579
Q ss_pred EEEEeeccCC-chhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 207 YLVFEYMEHD-ITGLLSC-PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 207 ~lv~e~~~~~-ll~~~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
|||||||..+ |++.+.. ....+...+...++.||++|++||+++++|||||...||||+++..+||+|||+|+....+
T Consensus 277 yIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~ 356 (468)
T KOG0197|consen 277 YIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDD 356 (468)
T ss_pred EEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCC
Confidence 9999999976 5555554 4667999999999999999999999999999999999999999999999999999965554
Q ss_pred CCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCC
Q 011763 285 HRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP 363 (478)
Q Consensus 285 ~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 363 (478)
........--+.-|.|||.+.. ..++.++|||||||+||||+| |+.||.+.+..+.++.+.+..--|.
T Consensus 357 ~Y~~~~~~kfPIkWtAPEa~~~-~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~---------- 425 (468)
T KOG0197|consen 357 EYTASEGGKFPIKWTAPEALNY-GKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPR---------- 425 (468)
T ss_pred ceeecCCCCCCceecCHHHHhh-CCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCC----------
Confidence 4433333344778999999986 679999999999999999999 9999999999999998865432221
Q ss_pred CccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHH
Q 011763 364 HATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAAL 411 (478)
Q Consensus 364 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L 411 (478)
...+|+++.+|+..|++.+|++|||.+.+.
T Consensus 426 ------------------P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 426 ------------------PEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred ------------------CCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 136899999999999999999999998654
No 180
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.2e-42 Score=337.55 Aligned_cols=260 Identities=23% Similarity=0.397 Sum_probs=211.5
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
++|++++.||+|+||.||++++..+++.||+|.+.... .......+.+|+.++++++|+||+++++.+.. ...+|+|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv 77 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFI--EGAVYMC 77 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheec--CCeEEEE
Confidence 47999999999999999999999899999999987542 34455678899999999999999999998877 6789999
Q ss_pred EeeccCCchhhccCC---CCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCcEEEecCCcEEEeecccccccCCCC
Q 011763 210 FEYMEHDITGLLSCP---DIKFSEAQIKCYMNQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH 285 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~---~~~l~~~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~ 285 (478)
|||++++.+..+... ...+++..+..++.||+.||.|||+ .+|+|+||||+||+++.++.++|+|||++......
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 156 (286)
T cd06622 78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS- 156 (286)
T ss_pred EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC-
Confidence 999998766655443 2368999999999999999999996 59999999999999999999999999998654322
Q ss_pred CCCccccccCCcccCcccccCC-----CCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccC
Q 011763 286 RQPLTSRVVTLWYRPPELLLGA-----TDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKS 360 (478)
Q Consensus 286 ~~~~~~~~~t~~y~APE~l~~~-----~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 360 (478)
......+++.|+|||++.+. ..++.++|||||||++|+|++|+.||...........+.......+..
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~----- 229 (286)
T cd06622 157 --LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPT----- 229 (286)
T ss_pred --ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCC-----
Confidence 12334568889999988542 235789999999999999999999997765544443333222211111
Q ss_pred CCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCC
Q 011763 361 KLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKP 420 (478)
Q Consensus 361 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~ 420 (478)
....++.++.+||.+||..||++||++.+++.||||....
T Consensus 230 --------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~ 269 (286)
T cd06622 230 --------------------LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYK 269 (286)
T ss_pred --------------------CCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhcc
Confidence 1135788999999999999999999999999999997644
No 181
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.5e-42 Score=334.99 Aligned_cols=256 Identities=29% Similarity=0.486 Sum_probs=212.9
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
++|++.+.||.|+||.||++.+..+++.||+|++..+. .......+.+|+.+++.++|+||+++++++.+ ...+|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~v 77 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLK--GSKLWII 77 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEE--CCeEEEE
Confidence 36999999999999999999999999999999997654 23445667889999999999999999999887 5789999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL 289 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 289 (478)
+||+.++.+..+.... ++++..++.++.||+.||.|||+++++|+||+|+||++++++.++|+|||++....... ...
T Consensus 78 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~~~ 155 (274)
T cd06609 78 MEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-SKR 155 (274)
T ss_pred EEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc-ccc
Confidence 9999986665555444 78999999999999999999999999999999999999999999999999997665432 122
Q ss_pred cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccC
Q 011763 290 TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFK 369 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 369 (478)
....+++.|+|||++.+ ..++.++|||||||++|+|++|.+||...+.......+.... ++
T Consensus 156 ~~~~~~~~y~~PE~~~~-~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--~~---------------- 216 (274)
T cd06609 156 NTFVGTPFWMAPEVIKQ-SGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNN--PP---------------- 216 (274)
T ss_pred ccccCCccccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcC--CC----------------
Confidence 33466888999999876 558999999999999999999999998776555444333211 00
Q ss_pred CCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 370 PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 370 ~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
.+.. ..++.++.++|.+||..||++|||+.++|+||||.+
T Consensus 217 -------~~~~--~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~ 256 (274)
T cd06609 217 -------SLEG--NKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKK 256 (274)
T ss_pred -------CCcc--cccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcC
Confidence 0000 126788999999999999999999999999999976
No 182
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-43 Score=321.31 Aligned_cols=261 Identities=24% Similarity=0.394 Sum_probs=218.2
Q ss_pred ccccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCce
Q 011763 127 LRADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSCS 205 (478)
Q Consensus 127 ~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~ 205 (478)
...++.+++..||.|..|+||+++.+.+|...|||.+.... +.+..++++..+.++... ++|+||+.+++|.. ...
T Consensus 89 ~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~-Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~--n~d 165 (391)
T KOG0983|consen 89 ADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG-NKEENKRILMDLDVVLKSHDCPYIVQCFGYFIT--NTD 165 (391)
T ss_pred cChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC-CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEee--Cch
Confidence 34678889999999999999999999999999999998765 556677888888888777 59999999999987 455
Q ss_pred EEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 206 IYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSR-GVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
+++.||.|.--...++..-..+++|..+-++...++.||.||.++ +|||||+||+|||||+.|++||||||.+-..-..
T Consensus 166 V~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS 245 (391)
T KOG0983|consen 166 VFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS 245 (391)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecc
Confidence 788899987655555555666899999999999999999999965 8999999999999999999999999998654432
Q ss_pred CCCCccccccCCcccCcccccC--CCCCCChhhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHHHcCCCCchhhccCC
Q 011763 285 HRQPLTSRVVTLWYRPPELLLG--ATDYGPSVDLWSVGCVFAELLIGKPILQG-RTEVEQLHKIFKLCGSPPDDYWKKSK 361 (478)
Q Consensus 285 ~~~~~~~~~~t~~y~APE~l~~--~~~~~~~~DiwslG~il~elltG~~pf~~-~~~~~~~~~i~~~~g~~~~~~~~~~~ 361 (478)
...+...|.+.|||||.+.- ...|+..+||||||+.|+||.||+.||.+ +++.+.+.++.+.. ||
T Consensus 246 --kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~e--PP-------- 313 (391)
T KOG0983|consen 246 --KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEE--PP-------- 313 (391)
T ss_pred --cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcC--CC--------
Confidence 22344577899999999853 24689999999999999999999999998 46778888887622 11
Q ss_pred CCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 362 LPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 362 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
.|.. -..+++.+.+|+..||..|+.+||...++|+|||+..
T Consensus 314 ---------------~L~~-~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ 354 (391)
T KOG0983|consen 314 ---------------LLPG-HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKR 354 (391)
T ss_pred ---------------CCCc-ccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceee
Confidence 1111 1238999999999999999999999999999999875
No 183
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=8.2e-44 Score=316.74 Aligned_cols=280 Identities=32% Similarity=0.605 Sum_probs=227.8
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcC-CCCeeeecceeeecCCceEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLD-HPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~ 207 (478)
.++|++++++|+|.|+.||.|.+..+++.++||+++ +-..+.+.+|+.||+.|. ||||++|+++..++......
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLK-----PVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa 111 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILK-----PVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS 111 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeec-----hHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence 679999999999999999999999999999999986 445677899999999996 99999999999988788889
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecC-CcEEEeecccccccCCCCC
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE-GVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~-~~vkl~DFG~a~~~~~~~~ 286 (478)
||+||+++.....+-. .|+.-.++.++.||+.||+|||++||+|||+||.|++|+.. -.++|+|+|+|.+..++
T Consensus 112 LiFE~v~n~Dfk~ly~---tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~-- 186 (338)
T KOG0668|consen 112 LIFEYVNNTDFKQLYP---TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG-- 186 (338)
T ss_pred hHhhhhccccHHHHhh---hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCC--
Confidence 9999999865544432 57888999999999999999999999999999999999976 57999999999988765
Q ss_pred CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCC-CCCCCCChHHHHHHHHHHcCCCCc-hhhccCCCCC
Q 011763 287 QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGK-PILQGRTEVEQLHKIFKLCGSPPD-DYWKKSKLPH 364 (478)
Q Consensus 287 ~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~-~pf~~~~~~~~~~~i~~~~g~~~~-~~~~~~~~~~ 364 (478)
.....++.+..|--||.+..-..|+...|+|||||+|..|++.+ |.|.|.++.+++.+|...+|.... .+..+..+.-
T Consensus 187 ~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~L 266 (338)
T KOG0668|consen 187 KEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDL 266 (338)
T ss_pred ceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCC
Confidence 33455677888999999988788999999999999999999977 556889999999999999987642 2233322221
Q ss_pred ccccCC------CCCCCccchhccc-CCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 365 ATLFKP------QQPYDSSLRETFK-DLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 365 ~~~~~~------~~~~~~~l~~~~~-~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
...+.. ..++...+..... -+++++.|||.++|.+|-++|+||.|++.||||..
T Consensus 267 dp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~ 327 (338)
T KOG0668|consen 267 DPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAP 327 (338)
T ss_pred ChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHH
Confidence 111111 0111111111112 24689999999999999999999999999999964
No 184
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.6e-42 Score=337.36 Aligned_cols=259 Identities=26% Similarity=0.437 Sum_probs=213.1
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|++++.||.|+||.||++.+..++..||+|++... .....+.+.+|+.++++++|+||+++++++.. ....|+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l 79 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFY--ENKLWI 79 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEec--CCeEEE
Confidence 45799999999999999999999889999999998754 34455678889999999999999999999887 667999
Q ss_pred EEeeccCCchhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 209 VFEYMEHDITGLLS-CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 209 v~e~~~~~ll~~~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
||||++++.+..+. .....+++..++.++.||+.||.|||+++|+|+||+|+||+++.++.++|+|||++....... .
T Consensus 80 v~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~ 158 (280)
T cd06611 80 LIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL-Q 158 (280)
T ss_pred EeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccc-c
Confidence 99999987665554 334579999999999999999999999999999999999999999999999999986543321 1
Q ss_pred CccccccCCcccCcccccC----CCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCC
Q 011763 288 PLTSRVVTLWYRPPELLLG----ATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP 363 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~----~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 363 (478)
......+++.|+|||++.. ...++.++|||||||++|+|++|++||...+....+.++... .++.
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~--------- 227 (280)
T cd06611 159 KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKS--EPPT--------- 227 (280)
T ss_pred ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcC--CCCC---------
Confidence 2233467889999998752 245778999999999999999999999887666555444321 1000
Q ss_pred CccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 364 HATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 364 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
......++.++.+||.+||+.||.+||++.++|+||||.+
T Consensus 228 ---------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 267 (280)
T cd06611 228 ---------------LDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSD 267 (280)
T ss_pred ---------------cCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcc
Confidence 0001246788999999999999999999999999999976
No 185
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=4.7e-42 Score=331.46 Aligned_cols=255 Identities=29% Similarity=0.531 Sum_probs=208.9
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCC-------hHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFE-------PESVRFMAREILILRRLDHPNIIKLEGLITSRLS 203 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~-------~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 203 (478)
+|.+...||.|+||.||+|.+..+++.||+|.+...... ....+.+.+|+.+++.++||||+++++++.. .
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~ 78 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD--A 78 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe--C
Confidence 367889999999999999999888999999998654322 1233567789999999999999999999877 6
Q ss_pred ceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCC
Q 011763 204 CSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNT 283 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~ 283 (478)
...++||||++++.+..+......+++..+..++.||+.||.|||++|++|+||+|+||++++++.++|+|||++.....
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06628 79 DHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEA 158 (267)
T ss_pred CccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccc
Confidence 68899999999876666665556789999999999999999999999999999999999999999999999999876542
Q ss_pred CCC-----CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhc
Q 011763 284 GHR-----QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWK 358 (478)
Q Consensus 284 ~~~-----~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~ 358 (478)
... .......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...+....+.++.... .+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~----- 230 (267)
T cd06628 159 NSLSTKTNGARPSLQGSVFWMAPEVVKQ-TSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENA--SP----- 230 (267)
T ss_pred ccccCCccccccccCCCcCccChhHhcc-CCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccC--CC-----
Confidence 111 11112346788999999876 567889999999999999999999998876655544432210 00
Q ss_pred cCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 359 KSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
.....++..+.+||.+||+.||.+||++.++|+||||
T Consensus 231 ---------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 231 ---------------------EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred ---------------------cCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 0113578889999999999999999999999999998
No 186
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=4e-42 Score=335.05 Aligned_cols=257 Identities=24% Similarity=0.367 Sum_probs=212.0
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
.|++++.||.|+||.||++.+..++..+++|.+... .....+.+.+|+.+++.++||||+++++++.. ....|+||
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~--~~~~~~v~ 81 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYY--ENNLWILI 81 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC--CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEee--CCEEEEEE
Confidence 478999999999999999999999999999998643 24455677889999999999999999999877 56899999
Q ss_pred eeccCCchhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc
Q 011763 211 EYMEHDITGLLS-CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL 289 (478)
Q Consensus 211 e~~~~~ll~~~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 289 (478)
||++++.+..+. ....++++..+..++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++....... ...
T Consensus 82 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-~~~ 160 (282)
T cd06643 82 EFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-QRR 160 (282)
T ss_pred EecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccc-ccc
Confidence 999987765543 345579999999999999999999999999999999999999999999999999986543221 222
Q ss_pred cccccCCcccCccccc----CCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 290 TSRVVTLWYRPPELLL----GATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~----~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
....+++.|+|||++. ....++.++|||||||++|+|++|++||...+..+....+........
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~------------ 228 (282)
T cd06643 161 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTL------------ 228 (282)
T ss_pred ccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCC------------
Confidence 3346788999999874 224577899999999999999999999998777666655543211000
Q ss_pred cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 366 TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
.....++.++.+||.+||+.||.+||++.++|+||||+.
T Consensus 229 --------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 267 (282)
T cd06643 229 --------------AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTV 267 (282)
T ss_pred --------------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEec
Confidence 001246788999999999999999999999999999986
No 187
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6e-42 Score=336.65 Aligned_cols=256 Identities=28% Similarity=0.486 Sum_probs=214.2
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
.+|++.+.||.|+||+||++.+..+++.||+|.+..... ...+.+.+|+.+++.++||||+++++++.. ...+|+|
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 94 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ--PKKELIINEILVMKELKNPNIVNFLDSFLV--GDELFVV 94 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC--chHHHHHHHHHHHHhcCCCceeeeeeeEec--CceEEEE
Confidence 479999999999999999999999999999999975532 334667889999999999999999999977 6789999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL 289 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 289 (478)
+||+.++.+..+.... .+++.++..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++........ ..
T Consensus 95 ~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~ 172 (296)
T cd06655 95 MEYLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS-KR 172 (296)
T ss_pred EEecCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc-cC
Confidence 9999987776665433 689999999999999999999999999999999999999999999999999876543321 12
Q ss_pred cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccC
Q 011763 290 TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFK 369 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 369 (478)
....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...+..+.+..+... ..++.
T Consensus 173 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~~~~~--------------- 235 (296)
T cd06655 173 STMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPEL--------------- 235 (296)
T ss_pred CCcCCCccccCcchhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCccc---------------
Confidence 33467889999998876 66889999999999999999999999988776655544321 11100
Q ss_pred CCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 370 PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 370 ~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
.....+++.+.+||.+||..||.+|||+.+++.||||+.
T Consensus 236 ----------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~ 274 (296)
T cd06655 236 ----------QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKL 274 (296)
T ss_pred ----------CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhh
Confidence 011357888999999999999999999999999999975
No 188
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=4e-42 Score=331.38 Aligned_cols=261 Identities=27% Similarity=0.430 Sum_probs=213.5
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
++|++.+.||.|+||+||++....++..+|+|++....... ....+.+|+.+|+.++|+||+++++.+.. ....|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~iv 77 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVV--GDELWLV 77 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEee--CCEEEEE
Confidence 47999999999999999999998899999999997655433 56778899999999999999999998877 6789999
Q ss_pred EeeccCCchhhccCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 210 FEYMEHDITGLLSCP---DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~---~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
||+++++.+..+... ...+++..++.++.||+.||.|||++||+|+||+|+||++++++.++|+|||++........
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 78 MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred EeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999998665555432 24689999999999999999999999999999999999999999999999999876543322
Q ss_pred C---CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCC
Q 011763 287 Q---PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP 363 (478)
Q Consensus 287 ~---~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 363 (478)
. ......++..|+|||++.....++.++|+|||||++|+|++|+.||...+....+.++... .+..+
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~------- 227 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN---DPPSL------- 227 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC---CCCCc-------
Confidence 1 1233457889999999876447889999999999999999999999877665555444331 11000
Q ss_pred CccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 364 HATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 364 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
.. ...+..+++.+.+||.+||..||++|||+.++|.||||
T Consensus 228 -----------~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 228 -----------ET--GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred -----------CC--ccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 00 00124678899999999999999999999999999998
No 189
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=7e-42 Score=328.88 Aligned_cols=256 Identities=30% Similarity=0.472 Sum_probs=213.8
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
+|++++.||.|+||.||++.+..+++.||+|++..........+.+.+|+.+++.++|+||+++++++........|++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 48999999999999999999999999999999987666666677888999999999999999999988765567789999
Q ss_pred eeccCCchhhccC----CCCCCCHHHHHHHHHHHHHHHHHHH-----hCCceeccCCCCcEEEecCCcEEEeeccccccc
Q 011763 211 EYMEHDITGLLSC----PDIKFSEAQIKCYMNQLLHGLEHCH-----SRGVLHRDIKGSNLLVNNEGVLKLADFGLANFS 281 (478)
Q Consensus 211 e~~~~~ll~~~~~----~~~~l~~~~~~~i~~qil~aL~~LH-----~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~ 281 (478)
||++++.+..+.. ...++++..++.++.||+.||.||| +.+|+|+||+|+||+++.++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 9998765543332 2457899999999999999999999 889999999999999999999999999999866
Q ss_pred CCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCC
Q 011763 282 NTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK 361 (478)
Q Consensus 282 ~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 361 (478)
..... ......+++.|+|||++.+ ..++.++||||||+++|+|++|+.||...+..+....+.... .+
T Consensus 161 ~~~~~-~~~~~~~~~~~~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~-------- 228 (265)
T cd08217 161 GHDSS-FAKTYVGTPYYMSPEQLNH-MSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGK--FR-------- 228 (265)
T ss_pred cCCcc-cccccccCCCccChhhhcC-CCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCC--CC--------
Confidence 54321 1234567899999999876 568899999999999999999999999877544444332210 00
Q ss_pred CCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 362 LPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 362 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
.....++..+.+||.+||..||.+|||+.++|+|||+
T Consensus 229 ------------------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 229 ------------------RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred ------------------CCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 0112567889999999999999999999999999996
No 190
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=4.8e-42 Score=334.30 Aligned_cols=259 Identities=24% Similarity=0.416 Sum_probs=204.7
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHH-HHhcCCCCeeeecceeeecCCceEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILI-LRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
++|++++.||+|+||.||++.+..+++.||+|+++........ ..+..|+.+ ++.++||||+++++++.. ....|+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~iv~~~~~~~~--~~~~~l 77 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQ-KRLLMDLDISMRSVDCPYTVTFYGALFR--EGDVWI 77 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHH-HHHHHHHHHHHHHcCCCCeeeeeEEEec--CCcEEE
Confidence 4799999999999999999999999999999999865433333 344456665 566799999999999876 567999
Q ss_pred EEeeccCCchhhcc---CCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 209 VFEYMEHDITGLLS---CPDIKFSEAQIKCYMNQLLHGLEHCHSR-GVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 209 v~e~~~~~ll~~~~---~~~~~l~~~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
+|||+++.+...+. .....+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||++......
T Consensus 78 v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 78 CMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred EhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 99999986544432 3445799999999999999999999997 9999999999999999999999999998765432
Q ss_pred CCCCccccccCCcccCcccccCC---CCCCChhhHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHHcCCCCchhhccC
Q 011763 285 HRQPLTSRVVTLWYRPPELLLGA---TDYGPSVDLWSVGCVFAELLIGKPILQGR-TEVEQLHKIFKLCGSPPDDYWKKS 360 (478)
Q Consensus 285 ~~~~~~~~~~t~~y~APE~l~~~---~~~~~~~DiwslG~il~elltG~~pf~~~-~~~~~~~~i~~~~g~~~~~~~~~~ 360 (478)
.......++..|+|||++.+. ..++.++|+|||||++|+|++|+.||... ...+.+..+... ..+ ..
T Consensus 158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~-~~---- 228 (283)
T cd06617 158 --VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEE--PSP-QL---- 228 (283)
T ss_pred --cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhc--CCC-CC----
Confidence 112234678889999988642 34688999999999999999999999653 333444333221 000 00
Q ss_pred CCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCC
Q 011763 361 KLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKP 420 (478)
Q Consensus 361 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~ 420 (478)
....++.++.+||.+||..||.+|||+.++++||||....
T Consensus 229 --------------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 229 --------------------PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred --------------------CccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 0024688999999999999999999999999999998743
No 191
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.5e-42 Score=336.91 Aligned_cols=257 Identities=27% Similarity=0.476 Sum_probs=211.7
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
..+|++++.||+|+||.||++.+..+++.||+|.+..... ...+.+.+|+.+++.++|+||+++++.+.. ....|+
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~--~~~~~l 94 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLV--GDELWV 94 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhCCCCCEeeEEEEEEe--CCEEEE
Confidence 3589999999999999999999999999999999976543 234667789999999999999999999887 678999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||||++++.+..+... ..+++.++..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++....... ..
T Consensus 95 v~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~-~~ 172 (296)
T cd06654 95 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SK 172 (296)
T ss_pred eecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccc-cc
Confidence 9999998766655543 368999999999999999999999999999999999999999999999999987554322 11
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF 368 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 368 (478)
.....+++.|+|||.+.+ ..++.++|||||||++|+|++|++||...+....+..+... +.++.
T Consensus 173 ~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~-------------- 236 (296)
T cd06654 173 RSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTPEL-------------- 236 (296)
T ss_pred cCcccCCccccCHHHHcC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcC-CCCCC--------------
Confidence 233467889999998876 66789999999999999999999999877665444332211 11100
Q ss_pred CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 369 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 369 ~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
.....++..+.+||.+||..||++|||+.++|.||||..
T Consensus 237 -----------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~ 275 (296)
T cd06654 237 -----------QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275 (296)
T ss_pred -----------CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhc
Confidence 001356788999999999999999999999999999976
No 192
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=8.1e-42 Score=332.98 Aligned_cols=280 Identities=40% Similarity=0.693 Sum_probs=220.9
Q ss_pred eeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc---CCCCeeeecceeeecCC---ce
Q 011763 132 FEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL---DHPNIIKLEGLITSRLS---CS 205 (478)
Q Consensus 132 y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~~~~---~~ 205 (478)
|++.+.||.|+||.||++++..+++.||+|+++...........+.+|+.+++++ +|+||+++++++..... ..
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 7889999999999999999988899999999975543333344556788777766 59999999999876321 23
Q ss_pred EEEEEeeccCCchhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 206 IYLVFEYMEHDITGLLSCP-DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
++++|||+.+.+...+... ...+++..++.++.||+.||.|||+++++|+||+|+||+++.++.+||+|||++......
T Consensus 81 ~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~ 160 (287)
T cd07838 81 LTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFE 160 (287)
T ss_pred eEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCC
Confidence 8999999998766555432 235899999999999999999999999999999999999999999999999998765432
Q ss_pred CCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 285 HRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 285 ~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
. ......++..|+|||++.+ ..++.++|||||||++|+|++|++||...+..+.+.++......+....|.......
T Consensus 161 ~--~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07838 161 M--ALTSVVVTLWYRAPEVLLQ-SSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLP 237 (287)
T ss_pred c--ccccccccccccChHHhcc-CCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccc
Confidence 1 2223356888999999876 568899999999999999999999999999999999998877766554443322111
Q ss_pred ccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 365 ATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 365 ~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
...+. ...........+.+++.+.+||.+||+.||.+||++.++|.||||
T Consensus 238 ~~~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 238 RSSFP--SYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred hhhcc--cccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 11111 111112233345678889999999999999999999999999998
No 193
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-44 Score=353.59 Aligned_cols=254 Identities=31% Similarity=0.502 Sum_probs=220.7
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
.|.-++.||.|+||.||.+++..+.+.||||++..... ..+.+..+..|+.+|++|.|||+|.+-++|.. +...|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLr--e~TaWLV 104 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLR--EHTAWLV 104 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeec--cchHHHH
Confidence 58889999999999999999999999999999987643 45667788899999999999999999998876 5668999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL 289 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 289 (478)
||||-|+-.+.+....+++.+.++..|+.+.+.||.|||+++.||||||..||||++.|.|||+|||.|....+ .
T Consensus 105 MEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P-----A 179 (948)
T KOG0577|consen 105 MEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP-----A 179 (948)
T ss_pred HHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCc-----h
Confidence 99999977777766777899999999999999999999999999999999999999999999999999976643 4
Q ss_pred cccccCCcccCccccc--CCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccc
Q 011763 290 TSRVVTLWYRPPELLL--GATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATL 367 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~--~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 367 (478)
.+++|||.|||||+|+ ..+.|+-++||||||++..||...+||+...+....+-.|... .+|.
T Consensus 180 nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQN-esPt-------------- 244 (948)
T KOG0577|consen 180 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-ESPT-------------- 244 (948)
T ss_pred hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhc-CCCC--------------
Confidence 6789999999999985 3467999999999999999999999998887777666665431 1111
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
|. -++.+..+.+|+..||.+-|..|||++++|.|+|...
T Consensus 245 ----------Lq--s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R 283 (948)
T KOG0577|consen 245 ----------LQ--SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLR 283 (948)
T ss_pred ----------CC--CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhcc
Confidence 11 1356788999999999999999999999999999864
No 194
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=6.7e-42 Score=333.26 Aligned_cols=280 Identities=39% Similarity=0.679 Sum_probs=226.0
Q ss_pred eeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcC-CCCeeeecceeeecCCceEEEEE
Q 011763 132 FEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLD-HPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 132 y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
|++.+.||.|+||+||+|++..+++.||||.+...... .......+|+..+.+++ |+||+++++++.. ....|+||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~--~~~~~lv~ 77 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPNIVKLKEVFRE--NDELYFVF 77 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCCCCchhHHHHhhc--CCcEEEEE
Confidence 67889999999999999999888999999998754322 22233456999999998 9999999999977 67899999
Q ss_pred eeccCCchhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc
Q 011763 211 EYMEHDITGLLSCPD-IKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL 289 (478)
Q Consensus 211 e~~~~~ll~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 289 (478)
||+.+.+...+.... ..+++..+..++.||+.+|.|||+++++|+||+|+||++++++.++|+|||++...... ...
T Consensus 78 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~--~~~ 155 (283)
T cd07830 78 EYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR--PPY 155 (283)
T ss_pred ecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC--CCc
Confidence 999777766665543 46899999999999999999999999999999999999999999999999999765432 122
Q ss_pred cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcccc-
Q 011763 290 TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF- 368 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~- 368 (478)
....++..|+|||++.....++.++||||||+++|+|++|++||......+.+.++...++.+....|...........
T Consensus 156 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd07830 156 TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGF 235 (283)
T ss_pred CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccc
Confidence 3456788999999986656688999999999999999999999999999999999999998888776654321111110
Q ss_pred CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 369 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 369 ~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
.........+...++..+..+.+||++||..||++|||+.|++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 236 RFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred cccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 000011112233344557889999999999999999999999999998
No 195
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.7e-42 Score=333.32 Aligned_cols=258 Identities=28% Similarity=0.450 Sum_probs=208.9
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|++.+.||.|+||.||++++..+++.||+|+++... ......+.+|+.+++.++||||+++++++.. ...+|+
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~--~~~~~l 83 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP--GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLR--RDKLWI 83 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEe--CCEEEE
Confidence 458999999999999999999999999999999987553 2334567789999999999999999999877 678999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||||++++.+..+......+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++....... ..
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-~~ 162 (267)
T cd06645 84 CMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI-AK 162 (267)
T ss_pred EEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc-cc
Confidence 99999987666665556689999999999999999999999999999999999999999999999999986554321 22
Q ss_pred ccccccCCcccCccccc--CCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcc
Q 011763 289 LTSRVVTLWYRPPELLL--GATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHAT 366 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~--~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 366 (478)
.....++..|+|||++. ....++.++|||||||++|+|++|.+||........+..+......++ .
T Consensus 163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~--~---------- 230 (267)
T cd06645 163 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPP--K---------- 230 (267)
T ss_pred cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCC--c----------
Confidence 23456789999999874 224578899999999999999999999876554443333221100000 0
Q ss_pred ccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcc
Q 011763 367 LFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEY 415 (478)
Q Consensus 367 ~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~ 415 (478)
+ .....++..+.+||.+||..||++|||+.++|+|||
T Consensus 231 -----------~-~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 231 -----------L-KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred -----------c-cccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 0 001246778999999999999999999999999998
No 196
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=8.9e-42 Score=329.32 Aligned_cols=256 Identities=26% Similarity=0.451 Sum_probs=209.1
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCC----hHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFE----PESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSI 206 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 206 (478)
+|++.+.||.|+||+||++.+ .+++.+|+|++...... ......+.+|+.+|+.++|+||+++++++.+ ....
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~ 77 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLD--DNTI 77 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeec--CCeE
Confidence 478899999999999999986 47889999998754321 2334567889999999999999999999987 5789
Q ss_pred EEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC--
Q 011763 207 YLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG-- 284 (478)
Q Consensus 207 ~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~-- 284 (478)
|+||||++++.+..+......+++..+..++.||+.||.|||+.+|+|+||+|+||++++++.++|+|||++......
T Consensus 78 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 78 SIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL 157 (265)
T ss_pred EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence 999999998777766665567899999999999999999999999999999999999999999999999998754211
Q ss_pred ---CCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCC
Q 011763 285 ---HRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK 361 (478)
Q Consensus 285 ---~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 361 (478)
.........++..|+|||++.+ ..++.++|||||||++|+|++|..||...+.......+....+..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------- 228 (265)
T cd06631 158 HGTHSNMLKSMHGTPYWMAPEVINE-SGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMP-------- 228 (265)
T ss_pred cccccccccccCCCccccChhhhcC-CCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCC--------
Confidence 1111233457889999999876 6688999999999999999999999987665554433332111111
Q ss_pred CCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 362 LPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 362 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
.....++.++.+||.+||..||.+|||+.++|.||||
T Consensus 229 ------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 229 ------------------RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred ------------------CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 0113578889999999999999999999999999997
No 197
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.4e-41 Score=326.15 Aligned_cols=254 Identities=26% Similarity=0.431 Sum_probs=215.6
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
+|++++.||.|+||.||.+++..+++.+++|.+............+.+|+.++++++|+||+++++++.+ ...++++|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~~~~ 78 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMD--DNTLLIEM 78 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEec--CCeEEEEE
Confidence 5899999999999999999999999999999998766666667778899999999999999999999987 67899999
Q ss_pred eeccCCchhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 211 EYMEHDITGLLSCP--DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 211 e~~~~~ll~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||++++.+..+... ...+++..+..++.|++.+|.|||+.|++|+||+|+||++++++.+||+|||++....... ..
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~-~~ 157 (256)
T cd08221 79 EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY-SM 157 (256)
T ss_pred EecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc-cc
Confidence 99997555444332 3568999999999999999999999999999999999999999999999999997664432 12
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF 368 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 368 (478)
.....+++.|+|||++.+ ..++.++|||||||++|+|++|..||...+..+....+... .++.
T Consensus 158 ~~~~~~~~~y~ape~~~~-~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~--~~~~-------------- 220 (256)
T cd08221 158 AETVVGTPYYMSPELCQG-VKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQG--NYTP-------------- 220 (256)
T ss_pred ccccCCCccccCHhhcCC-CCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC--CCCC--------------
Confidence 344567899999999876 55788999999999999999999999987777766665431 1110
Q ss_pred CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 369 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 369 ~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
....++.++.++|.+||..||.+||++.++|+|+|+
T Consensus 221 ------------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 221 ------------VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred ------------CccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 013567889999999999999999999999999996
No 198
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=4.3e-42 Score=332.64 Aligned_cols=257 Identities=27% Similarity=0.425 Sum_probs=205.5
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecC----C
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSRL----S 203 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~----~ 203 (478)
...|++.+.||.|+||.||+|.+..+++.||+|++.... .....+.+|+.++.++ +|+||+++++++.... .
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC---ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 347999999999999999999999999999999997543 2234577899999998 7999999999986532 2
Q ss_pred ceEEEEEeeccCCchhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeeccccccc
Q 011763 204 CSIYLVFEYMEHDITGLLSCP--DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFS 281 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~ 281 (478)
..+|+||||+.++.+..+... ...+++..+..++.||+.||+|||+++|+|+||||+||++++++.++|+|||++...
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~ 161 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 161 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence 468999999998655544332 346899999999999999999999999999999999999999999999999998755
Q ss_pred CCCCCCCccccccCCcccCcccccC----CCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhh
Q 011763 282 NTGHRQPLTSRVVTLWYRPPELLLG----ATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYW 357 (478)
Q Consensus 282 ~~~~~~~~~~~~~t~~y~APE~l~~----~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~ 357 (478)
.... .......+++.|+|||++.+ ...++.++|||||||++|+|++|..||...........+... +..
T Consensus 162 ~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~---~~~--- 234 (272)
T cd06637 162 DRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN---PAP--- 234 (272)
T ss_pred cccc-ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcC---CCC---
Confidence 3321 22234567889999999863 235788999999999999999999999765544333322110 000
Q ss_pred ccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 358 KKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
......++.++.+||.+||..||.+|||+.++|.||||
T Consensus 235 ---------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 235 ---------------------RLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred ---------------------CCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 00012467889999999999999999999999999998
No 199
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-43 Score=338.86 Aligned_cols=263 Identities=27% Similarity=0.402 Sum_probs=230.7
Q ss_pred cccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCce
Q 011763 128 RADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSCS 205 (478)
Q Consensus 128 ~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~ 205 (478)
+..+|.++..||+|+||.|.++..+.+.+.||||+++++.. +.+..+-.+.|-++|... +-|++++++..|+. .+.
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQT--mDR 424 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQT--MDR 424 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhh--hhh
Confidence 35689999999999999999999999999999999998764 444555566788888877 57899999999987 678
Q ss_pred EEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC
Q 011763 206 IYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH 285 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~ 285 (478)
+|+||||+.|+.+....+.-+.+-+..+..|+.+|+.||-|||++|||+||||.+||||+.+|++||+|||+++..--+
T Consensus 425 LyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~- 503 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD- 503 (683)
T ss_pred eeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccC-
Confidence 9999999999888888888889999999999999999999999999999999999999999999999999999753322
Q ss_pred CCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 286 RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 286 ~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
.....+.+|||.|+|||++.- .+|+.++|+|++||+||||+.|++||.+.++.+..+.|++..-..|
T Consensus 504 ~~TTkTFCGTPdYiAPEIi~Y-qPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyP------------ 570 (683)
T KOG0696|consen 504 GVTTKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYP------------ 570 (683)
T ss_pred CcceeeecCCCcccccceEEe-cccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCc------------
Confidence 244567899999999999875 7899999999999999999999999999999999999987543332
Q ss_pred cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCH-----HHHHhCcccCCCCCCC
Q 011763 366 TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATA-----SAALASEYFSTKPYAC 423 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta-----~e~L~hp~f~~~~~~~ 423 (478)
+.++.++.++++.+|...|.+|.-+ .++-.||||....|..
T Consensus 571 -----------------KslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek 616 (683)
T KOG0696|consen 571 -----------------KSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEK 616 (683)
T ss_pred -----------------ccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHH
Confidence 4688999999999999999999764 6899999999877643
No 200
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.2e-41 Score=328.63 Aligned_cols=259 Identities=27% Similarity=0.427 Sum_probs=209.3
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC---ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF---EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSI 206 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 206 (478)
++|++.+.||+|+||.||++.+..++..||||++..+.. .....+.+.+|+.++++++||||+++++++.+.....+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 479999999999999999999999999999999865432 23445678889999999999999999998876555678
Q ss_pred EEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 207 YLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 207 ~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
+++|||++++.+..+......+++..+..++.||+.||.|||+++|+|+||||+|||++.++.++|+|||++........
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~ 161 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL 161 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccc
Confidence 99999999876665554445689999999999999999999999999999999999999999999999999875432111
Q ss_pred --CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 287 --QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 287 --~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
.......++..|+|||++.+ ..++.++|||||||++|+|++|+.||........+.++.. .+...
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~~~~--------- 228 (265)
T cd06652 162 SGTGMKSVTGTPYWMSPEVISG-EGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT---QPTNP--------- 228 (265)
T ss_pred cccccccCCCCccccChhhhcC-CCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhc---CCCCC---------
Confidence 11223457889999999876 5688999999999999999999999987655554433321 11000
Q ss_pred ccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccC
Q 011763 365 ATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFS 417 (478)
Q Consensus 365 ~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~ 417 (478)
.....++..+.++|.+||. +|.+||+++++|.|||+.
T Consensus 229 ---------------~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 229 ---------------VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred ---------------CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 0012467788999999995 999999999999999984
No 201
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.6e-42 Score=332.46 Aligned_cols=258 Identities=29% Similarity=0.453 Sum_probs=206.5
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|++.+.||+|+||.||++++..+++.||+|++.... ......+.+|+.+++.++||||+++++++.. ...+|+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~--~~~~~i 83 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP--GDDFSLIQQEIFMVKECKHCNIVAYFGSYLS--REKLWI 83 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc--cchHHHHHHHHHHHHhcCCCCeeeeeEEEEe--CCEEEE
Confidence 457999999999999999999999999999999997543 2334567789999999999999999999877 577999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||||++++.+..+......+++..+..++.||+.||.|||+++|+|+||+|+||+++.++.++|+|||++....... ..
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-~~ 162 (267)
T cd06646 84 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI-AK 162 (267)
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccc-cc
Confidence 99999987666655555678999999999999999999999999999999999999999999999999997553221 11
Q ss_pred ccccccCCcccCcccccC--CCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcc
Q 011763 289 LTSRVVTLWYRPPELLLG--ATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHAT 366 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~--~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 366 (478)
.....+++.|+|||++.. ...++.++|||||||++|+|++|++||......+....+......++
T Consensus 163 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~------------- 229 (267)
T cd06646 163 RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPP------------- 229 (267)
T ss_pred cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCC-------------
Confidence 233467889999998742 24577899999999999999999999875543332222111000000
Q ss_pred ccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcc
Q 011763 367 LFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEY 415 (478)
Q Consensus 367 ~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~ 415 (478)
. + .....++..+.+||.+||..||++|||++++|+|+|
T Consensus 230 -----~-----~-~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 230 -----K-----L-KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred -----C-----C-ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 0 0 001246789999999999999999999999999987
No 202
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.6e-43 Score=351.72 Aligned_cols=258 Identities=27% Similarity=0.460 Sum_probs=228.1
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
...|.+++.||+|.|++|.++++..++..||||++.+...+......+.+|+++|..|+|||||+++.+... ...+|+
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t--~~~lyl 132 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIET--EATLYL 132 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeee--cceeEE
Confidence 347999999999999999999999999999999999888887777778999999999999999999999987 677999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||||+.++.+..+......+.+..++.++.|++.|++|||+++|||||||++||||+.+.++||+|||++..+... ..
T Consensus 133 V~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~--~~ 210 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG--LM 210 (596)
T ss_pred EEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccc--cc
Confidence 9999998888777777778888999999999999999999999999999999999999999999999999887743 45
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF 368 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 368 (478)
..+.+|++.|.|||++.+..+.++.+|+||+|++||-|+.|..||.+.+..+.-.+.+......
T Consensus 211 lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rI---------------- 274 (596)
T KOG0586|consen 211 LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRI---------------- 274 (596)
T ss_pred ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecc----------------
Confidence 6788999999999999987778999999999999999999999999877655443332211111
Q ss_pred CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 369 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 369 ~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
.-.++.+..+||++||..+|.+|++++++..|.|.+..
T Consensus 275 -------------p~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 275 -------------PFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL 312 (596)
T ss_pred -------------cceeechhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence 12467889999999999999999999999999999754
No 203
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-45 Score=336.94 Aligned_cols=256 Identities=26% Similarity=0.472 Sum_probs=214.8
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
-|.++.+||+|+||.||++.++++|+.+|||++..+ .....+..||.||++++.|++|++|+.|.. ...+|+||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK--~sDLWIVM 107 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFK--HSDLWIVM 107 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhcc--CCceEeeh
Confidence 599999999999999999999999999999999754 345567789999999999999999997765 45699999
Q ss_pred eeccCCc-hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc
Q 011763 211 EYMEHDI-TGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL 289 (478)
Q Consensus 211 e~~~~~l-l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 289 (478)
|||+.+. .+.++.++++|+++++..+++..+.||+|||...-||||||..||||+.+|..||+|||.|-.... .....
T Consensus 108 EYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD-TMAKR 186 (502)
T KOG0574|consen 108 EYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD-TMAKR 186 (502)
T ss_pred hhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhh-hHHhh
Confidence 9999654 455556778999999999999999999999999999999999999999999999999999865432 12334
Q ss_pred cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccC
Q 011763 290 TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFK 369 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 369 (478)
.+++|||.|||||++.. ..|+.++||||||++..||..|+|||........+..| --.||+.+
T Consensus 187 NTVIGTPFWMAPEVI~E-IGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMI---PT~PPPTF------------- 249 (502)
T KOG0574|consen 187 NTVIGTPFWMAPEVIEE-IGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMI---PTKPPPTF------------- 249 (502)
T ss_pred CccccCcccccHHHHHH-hccchhhhHhhhcchhhhhhcCCCCcccccccceeEec---cCCCCCCC-------------
Confidence 66889999999999986 67999999999999999999999999876654433322 11222211
Q ss_pred CCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCC
Q 011763 370 PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKP 420 (478)
Q Consensus 370 ~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~ 420 (478)
......+.++.|||++||-..|++|.||.++++|||.++.+
T Consensus 250 ----------~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~ 290 (502)
T KOG0574|consen 250 ----------KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAP 290 (502)
T ss_pred ----------CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCC
Confidence 11134678899999999999999999999999999998744
No 204
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-44 Score=349.82 Aligned_cols=255 Identities=26% Similarity=0.434 Sum_probs=219.7
Q ss_pred eeee--eeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 132 FEKL--EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 132 y~~~--~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
|+|. +.||.|.||+||-|+++.+|+.||||++.+-.+.......+.+|+.||+.++||.||.+.-.|+. .+.+++|
T Consensus 564 YQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET--~ervFVV 641 (888)
T KOG4236|consen 564 YQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFET--PERVFVV 641 (888)
T ss_pred HHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecC--CceEEEE
Confidence 4443 78999999999999999999999999999888877777889999999999999999999877776 6789999
Q ss_pred EeeccCCchhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecC---CcEEEeecccccccCCCC
Q 011763 210 FEYMEHDITGLLS-CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE---GVLKLADFGLANFSNTGH 285 (478)
Q Consensus 210 ~e~~~~~ll~~~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~---~~vkl~DFG~a~~~~~~~ 285 (478)
||-+.|+.+..++ ...+.|++...+.++.||+.||.|||.++|+|+||||+||||... -.+||||||+|++.++.
T Consensus 642 MEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk- 720 (888)
T KOG4236|consen 642 MEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK- 720 (888)
T ss_pred ehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchh-
Confidence 9999999887665 456789999999999999999999999999999999999999765 47999999999998764
Q ss_pred CCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 286 RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 286 ~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
....+.+|||.|+|||++.+ +.|....|+||+|||+|--++|..||..+.+. -.+|.+...-.|..-
T Consensus 721 -sFRrsVVGTPAYLaPEVLrn-kGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdI--ndQIQNAaFMyPp~P--------- 787 (888)
T KOG4236|consen 721 -SFRRSVVGTPAYLAPEVLRN-KGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDI--NDQIQNAAFMYPPNP--------- 787 (888)
T ss_pred -hhhhhhcCCccccCHHHHhh-ccccccccceeeeEEEEEEecccccCCCccch--hHHhhccccccCCCc---------
Confidence 34467899999999999987 78999999999999999999999999865443 223322222222222
Q ss_pred cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 366 TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
|.+++.+++|||..+|++.-.+|.+.++.|.|||+++
T Consensus 788 ----------------W~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~ 824 (888)
T KOG4236|consen 788 ----------------WSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQD 824 (888)
T ss_pred ----------------hhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhc
Confidence 2579999999999999999999999999999999986
No 205
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=9.6e-42 Score=327.22 Aligned_cols=254 Identities=26% Similarity=0.491 Sum_probs=211.3
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
+|++.+.||+|+||.||++++..+++.||+|.+..........+.+.+|+.+++.++||||+++++++.. ....|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv~ 78 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEE--NGNLYIVM 78 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecC--CCeEEEEE
Confidence 5899999999999999999999999999999998655555556678899999999999999999999876 67899999
Q ss_pred eeccCCchhh-ccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 211 EYMEHDITGL-LSC-PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 211 e~~~~~ll~~-~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||+.++.+.. +.. ....+++..+..++.||+.||.|||+++++|+||+|+|||++.++.++|+|||++....... ..
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~-~~ 157 (256)
T cd08218 79 DYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV-EL 157 (256)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch-hh
Confidence 9998754443 332 23358899999999999999999999999999999999999999999999999997554321 11
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF 368 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 368 (478)
.....+++.|+|||++.+ ..++.++|+|||||++|+|++|..||...+..+....+... ..+.
T Consensus 158 ~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~--~~~~-------------- 220 (256)
T cd08218 158 ARTCIGTPYYLSPEICEN-RPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRG--SYPP-------------- 220 (256)
T ss_pred hhhccCCccccCHHHhCC-CCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcC--CCCC--------------
Confidence 223456888999999876 56788999999999999999999999887766666555331 1110
Q ss_pred CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 369 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 369 ~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
....++.++.++|.+||+.+|.+||++.++|+||||
T Consensus 221 ------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 221 ------------VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred ------------CcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 012567889999999999999999999999999998
No 206
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.5e-42 Score=337.08 Aligned_cols=257 Identities=27% Similarity=0.471 Sum_probs=210.7
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
..+|++++.||.|+||.||++.+..+++.||+|.+..... ...+.+.+|+.+++.++|+||+++++++.. ....|+
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~l 93 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLV--GDELWV 93 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEec--CCEEEE
Confidence 3589999999999999999999999999999999976543 334567789999999999999999999977 678999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||||++++.+..+... ..+++..+..++.||+.+|.|||+.||+|+||||+|||++.++.++|+|||++....... ..
T Consensus 94 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~-~~ 171 (297)
T cd06656 94 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SK 171 (297)
T ss_pred eecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc-cC
Confidence 9999998766665533 368899999999999999999999999999999999999999999999999987654322 12
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF 368 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 368 (478)
.....+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||...+....+..+.. .+.++.
T Consensus 172 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~-~~~~~~-------------- 235 (297)
T cd06656 172 RSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPEL-------------- 235 (297)
T ss_pred cCcccCCccccCHHHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc-CCCCCC--------------
Confidence 233467889999998876 6688999999999999999999999987654333222111 111100
Q ss_pred CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 369 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 369 ~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
.....++..+.+||.+||..||++||++.++|+||||..
T Consensus 236 -----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 274 (297)
T cd06656 236 -----------QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKL 274 (297)
T ss_pred -----------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcc
Confidence 011246788999999999999999999999999999976
No 207
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.6e-41 Score=325.23 Aligned_cols=253 Identities=26% Similarity=0.420 Sum_probs=211.6
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
+|++.+.||+|+||.||++.+..+++.+|+|.+............+.+|+.+|+.++||||+++++.+.. ....++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLE--DKALMIVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEec--CCEEEEEE
Confidence 5899999999999999999999999999999998766666667788899999999999999999998876 67899999
Q ss_pred eeccCCchhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCC-cEEEeecccccccCCCCCC
Q 011763 211 EYMEHDITGLLSCP--DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG-VLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 211 e~~~~~ll~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~-~vkl~DFG~a~~~~~~~~~ 287 (478)
||++++.+..+... ...+++..+..++.|++.+|.|||++||+|+||+|+||+++.++ .+||+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-- 156 (256)
T cd08220 79 EYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS-- 156 (256)
T ss_pred ecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc--
Confidence 99998655544432 34589999999999999999999999999999999999998654 58999999997664322
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccc
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATL 367 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 367 (478)
......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||...+.......+......+
T Consensus 157 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 220 (256)
T cd08220 157 KAYTVVGTPCYISPELCEG-KPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAP--------------- 220 (256)
T ss_pred cccccccCCcccCchhccC-CCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCC---------------
Confidence 2233467889999999876 567899999999999999999999998877666555543311100
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
....++..+.+||.+||..||.+|||+.|+|.||||
T Consensus 221 -------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 221 -------------ISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred -------------CCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 012467889999999999999999999999999997
No 208
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-41 Score=332.44 Aligned_cols=250 Identities=20% Similarity=0.199 Sum_probs=204.8
Q ss_pred cceeee--eeeeecCceEEEEEEECCCCcEEEEEEeecCCCC-hHHHHHHHHHHHHHHhcCCCCeeeecceeee--cCCc
Q 011763 130 DAFEKL--EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFE-PESVRFMAREILILRRLDHPNIIKLEGLITS--RLSC 204 (478)
Q Consensus 130 ~~y~~~--~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~ 204 (478)
++++.. ..|++|+++.||+|.. +++.||||+++..... ....+.+.+|+.+|.+++||||+++++++.+ ....
T Consensus 18 ~~i~~~~~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~ 95 (283)
T PHA02988 18 DDIDKYTSVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLP 95 (283)
T ss_pred HHcCCCCCeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCC
Confidence 344444 6799999999999987 6889999999765432 2334677899999999999999999999876 4445
Q ss_pred eEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCcEEEecCCcEEEeecccccccCC
Q 011763 205 SIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSR-GVLHRDIKGSNLLVNNEGVLKLADFGLANFSNT 283 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~ 283 (478)
.+++||||+.++.+..+......+++.....++.|++.||.|||+. +++||||||+|||++.++.+||+|||+++....
T Consensus 96 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~ 175 (283)
T PHA02988 96 RLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSS 175 (283)
T ss_pred ceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcc
Confidence 7899999999987777766666899999999999999999999984 999999999999999999999999999976543
Q ss_pred CCCCCccccccCCcccCcccccCC-CCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCC
Q 011763 284 GHRQPLTSRVVTLWYRPPELLLGA-TDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL 362 (478)
Q Consensus 284 ~~~~~~~~~~~t~~y~APE~l~~~-~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 362 (478)
. .....++..|+|||++.+. ..++.++|||||||++|||++|+.||...+..+....+......++.
T Consensus 176 ~----~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~-------- 243 (283)
T PHA02988 176 P----PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKL-------- 243 (283)
T ss_pred c----cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCC--------
Confidence 2 1234678899999998642 46899999999999999999999999988777666655432211110
Q ss_pred CCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 363 PHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
....++.+.+||.+||+.||++|||+.++|+
T Consensus 244 -------------------~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 244 -------------------PLDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred -------------------CCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 0246788999999999999999999999984
No 209
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=8.7e-42 Score=330.06 Aligned_cols=252 Identities=20% Similarity=0.276 Sum_probs=204.1
Q ss_pred ccceeeeeeeeecCceEEEEEEEC---CCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCce
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDL---DTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCS 205 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~---~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 205 (478)
.++|++.+.||+|+||.||++++. ..+..||+|.++... .......+.+|+.++..++||||+++++++.. ...
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~ 80 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC-SDKQRRGFLAEALTLGQFDHSNIVRLEGVITR--GNT 80 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec--CCC
Confidence 457999999999999999999764 456789999987553 33445677889999999999999999999876 667
Q ss_pred EEEEEeeccCCchhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 206 IYLVFEYMEHDITGLLSC-PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
.||||||++++++..+.. ....+++..++.++.||+.||+|||+++++||||||+|||++.++.++|+|||.+......
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~ 160 (266)
T cd05064 81 MMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSE 160 (266)
T ss_pred cEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCccccccccc
Confidence 999999999877665543 3457899999999999999999999999999999999999999999999999987644322
Q ss_pred CCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCC
Q 011763 285 HRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP 363 (478)
Q Consensus 285 ~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 363 (478)
.........++..|+|||++.+ ..++.++|||||||++|||++ |..||...+..+.+..+.+....+
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~----------- 228 (266)
T cd05064 161 AIYTTMSGKSPVLWAAPEAIQY-HHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLP----------- 228 (266)
T ss_pred chhcccCCCCceeecCHHHHhh-CCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCC-----------
Confidence 1111112233578999998876 678999999999999999775 999999888777666553321110
Q ss_pred CccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 364 HATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 364 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
....++..+.+++.+||..||.+||++.++++
T Consensus 229 -----------------~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 229 -----------------APRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred -----------------CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 01357888999999999999999999999875
No 210
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.7e-41 Score=326.29 Aligned_cols=258 Identities=29% Similarity=0.469 Sum_probs=211.1
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|++.+.||.|+||.||++.+..+++.+++|++.... ......+.+|+.+++.++||||+++++++.. ...+|+
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~l 77 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP--GDDFEIIQQEISMLKECRHPNIVAYFGSYLR--RDKLWI 77 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc--hhhHHHHHHHHHHHHhCCCCChhceEEEEEe--CCEEEE
Confidence 358999999999999999999998899999999997653 2355778899999999999999999998877 678999
Q ss_pred EEeeccCCchhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPD-IKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
+|||++++.+..+.... ..+++..+..++.||+.||.|||+++|+|+||+|+||+++.++.++|+|||++....... .
T Consensus 78 ~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~ 156 (262)
T cd06613 78 VMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI-A 156 (262)
T ss_pred EEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhh-h
Confidence 99999987666554433 689999999999999999999999999999999999999999999999999987654321 1
Q ss_pred CccccccCCcccCcccccCC--CCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 288 PLTSRVVTLWYRPPELLLGA--TDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~--~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
......++..|+|||++.+. ..++.++|||||||++|+|++|.+||...+.......+......++ .
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~-~---------- 225 (262)
T cd06613 157 KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPP-K---------- 225 (262)
T ss_pred ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCc-c----------
Confidence 12334668889999988652 2678899999999999999999999988776555444322100000 0
Q ss_pred cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcc
Q 011763 366 TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEY 415 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~ 415 (478)
+ .....++.++.+||++||..||..|||+.++|.|+|
T Consensus 226 ------------~-~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 226 ------------L-KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred ------------c-cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 0 001245678999999999999999999999999998
No 211
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=7e-42 Score=335.54 Aligned_cols=260 Identities=25% Similarity=0.429 Sum_probs=213.4
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
+.|.....||.|+||.||++.+..++..||||++.... ....+.+.+|+.+++.++|+||+++++.+.. .+..|+|
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~--~~~~~lv 97 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHENVVDMYNSYLV--GDELWVV 97 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCCCcHHHHHHheec--CCeEEEE
Confidence 45666788999999999999998899999999986432 3445667899999999999999999999877 6789999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL 289 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 289 (478)
|||++++++..+... ..+++..+..++.||+.||.|||+++|+||||||+||++++++.++|+|||++....... ...
T Consensus 98 ~e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~-~~~ 175 (292)
T cd06658 98 MEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV-PKR 175 (292)
T ss_pred EeCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhccccc-ccC
Confidence 999998777665543 368999999999999999999999999999999999999999999999999986543322 222
Q ss_pred cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccC
Q 011763 290 TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFK 369 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 369 (478)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||...+....+..+........
T Consensus 176 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~---------------- 238 (292)
T cd06658 176 KSLVGTPYWMAPEVISR-LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRV---------------- 238 (292)
T ss_pred ceeecCccccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCcc----------------
Confidence 34567889999998875 6688999999999999999999999988776655554433211100
Q ss_pred CCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCCC
Q 011763 370 PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYA 422 (478)
Q Consensus 370 ~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~~ 422 (478)
.....++..+.+||.+||..||.+|||+.++|+||||...+.+
T Consensus 239 ----------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~ 281 (292)
T cd06658 239 ----------KDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPP 281 (292)
T ss_pred ----------ccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCc
Confidence 0012467889999999999999999999999999999865443
No 212
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=9.8e-42 Score=329.24 Aligned_cols=260 Identities=32% Similarity=0.519 Sum_probs=208.5
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCC----hHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFE----PESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSI 206 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 206 (478)
+|+..+.||+|+||.||++.+..+++.||+|++...... ....+.+.+|+.+|++++|+||+++++++.+ ....
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~ 78 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCE--DSHF 78 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceecc--CCeE
Confidence 478889999999999999999999999999999754321 2245678899999999999999999999977 6779
Q ss_pred EEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCC-cEEEeecccccccCCCC
Q 011763 207 YLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG-VLKLADFGLANFSNTGH 285 (478)
Q Consensus 207 ~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~-~vkl~DFG~a~~~~~~~ 285 (478)
++||||+.++.+..+.....++++..+..++.||+.||.|||++|++|+||+|+||+++.++ .++|+|||++.......
T Consensus 79 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~ 158 (268)
T cd06630 79 NLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKG 158 (268)
T ss_pred EEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccc
Confidence 99999999877766655556789999999999999999999999999999999999998776 59999999987654321
Q ss_pred C---CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCC
Q 011763 286 R---QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL 362 (478)
Q Consensus 286 ~---~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 362 (478)
. .......++..|+|||++.+ ..++.++|||||||++|+|++|..||...........+........
T Consensus 159 ~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------- 228 (268)
T cd06630 159 TGAGEFQGQLLGTIAFMAPEVLRG-EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATT--------- 228 (268)
T ss_pred ccCCccccccccccceeCHhHhcc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCC---------
Confidence 1 11123456889999999876 6688999999999999999999999976543333322222110000
Q ss_pred CCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccC
Q 011763 363 PHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFS 417 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~ 417 (478)
.......+++++.++|.+||..||.+|||+.++|+||||.
T Consensus 229 ---------------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 229 ---------------APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred ---------------CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 0001125678899999999999999999999999999984
No 213
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=3.3e-41 Score=324.62 Aligned_cols=259 Identities=31% Similarity=0.510 Sum_probs=211.6
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
+|++.+.||+|+||.||++.+..+++.||+|+++.........+.+.+|+.+++.++|+||+++++++.. ...+++|+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~~~lv~ 78 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVH--REKVYIFM 78 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEec--CCEEEEEE
Confidence 5889999999999999999998899999999998776555677888999999999999999999998876 67799999
Q ss_pred eeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc-
Q 011763 211 EYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL- 289 (478)
Q Consensus 211 e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~- 289 (478)
||++++.+..+......+++..++.++.||+.||.|||++||+|+||+|+||++++++.+||+|||++...........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~ 158 (264)
T cd06626 79 EYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGE 158 (264)
T ss_pred ecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccc
Confidence 9999877777666666789999999999999999999999999999999999999999999999999876543322111
Q ss_pred --cccccCCcccCcccccCCC--CCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 290 --TSRVVTLWYRPPELLLGAT--DYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 290 --~~~~~t~~y~APE~l~~~~--~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
....+++.|+|||++.+.. .++.++|||||||++|+|++|+.||............... +..+.
T Consensus 159 ~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~----------- 226 (264)
T cd06626 159 EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GHKPP----------- 226 (264)
T ss_pred cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-CCCCC-----------
Confidence 1245678999999987632 2788999999999999999999999765433222222111 11110
Q ss_pred cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 366 TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
. .....++..+.+||.+||+.||.+|||+.+++.|||+
T Consensus 227 --------~-----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 227 --------I-----PDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred --------C-----CcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 0 0012457889999999999999999999999999996
No 214
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=2.2e-41 Score=334.28 Aligned_cols=255 Identities=30% Similarity=0.493 Sum_probs=212.5
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
..|++.+.||+|+||+||++.+..+++.||+|++..... ..+....+.+|+.+++.++||||+++++++.. ....|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~--~~~~~l 92 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR--EHTAWL 92 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe--CCeEEE
Confidence 469999999999999999999988999999999875432 34455678899999999999999999999987 567899
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||||+.+++...+......+++..+..++.||+.||.|||+++|+|+||+|+||++++++.++|+|||++......
T Consensus 93 v~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~---- 168 (307)
T cd06607 93 VMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA---- 168 (307)
T ss_pred EHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC----
Confidence 9999998877776655567999999999999999999999999999999999999999999999999998755432
Q ss_pred ccccccCCcccCcccccC--CCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcc
Q 011763 289 LTSRVVTLWYRPPELLLG--ATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHAT 366 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~--~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 366 (478)
....+++.|+|||++.+ ...++.++||||||+++|+|++|++||...+.......+... .++.
T Consensus 169 -~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~--~~~~------------ 233 (307)
T cd06607 169 -NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--DSPT------------ 233 (307)
T ss_pred -CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC--CCCC------------
Confidence 23456788999998752 356888999999999999999999999877665544433211 0000
Q ss_pred ccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 367 LFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 367 ~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
. ....++..+.+||.+||..||++||++.+++.||||..
T Consensus 234 -------~------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 272 (307)
T cd06607 234 -------L------SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLR 272 (307)
T ss_pred -------C------CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 0 00135678999999999999999999999999999976
No 215
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=6.4e-42 Score=329.01 Aligned_cols=253 Identities=30% Similarity=0.428 Sum_probs=210.9
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCC-hHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFE-PESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
+|++.+.||.|+||.||++.+..+++.||+|++...... ....+.+.+|++++++++||||+++++.+.. ....|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 78 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQD--EENMYLV 78 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcC--CCeEEEE
Confidence 489999999999999999999999999999999765432 2456778899999999999999999998876 6789999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL 289 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 289 (478)
+||+.++.+........++++..+..++.||+.||.|||+++++|+||+|+||++++++.++|+|||++....... ..
T Consensus 79 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--~~ 156 (258)
T cd05578 79 VDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT--LT 156 (258)
T ss_pred EeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc--cc
Confidence 9999987766665555689999999999999999999999999999999999999999999999999987654332 22
Q ss_pred cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHcCCCCchhhccCCCCCccc
Q 011763 290 TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTE--VEQLHKIFKLCGSPPDDYWKKSKLPHATL 367 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~--~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 367 (478)
....++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+. .+.+.+.... ..
T Consensus 157 ~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~-------------- 218 (258)
T cd05578 157 TSTSGTPGYMAPEVLCR-QGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET---AD-------------- 218 (258)
T ss_pred cccCCChhhcCHHHHcc-cCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc---cc--------------
Confidence 34556888999998876 5589999999999999999999999987764 2222222110 00
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCH--HHHHhCccc
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATA--SAALASEYF 416 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta--~e~L~hp~f 416 (478)
......++..+.++|.+||..||.+||++ .|+++||||
T Consensus 219 -----------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 219 -----------VLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred -----------ccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 00112467899999999999999999999 999999998
No 216
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2e-41 Score=328.14 Aligned_cols=261 Identities=28% Similarity=0.504 Sum_probs=208.2
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCC--------hHHHHHHHHHHHHHHhcCCCCeeeecceeeecC
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFE--------PESVRFMAREILILRRLDHPNIIKLEGLITSRL 202 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~--------~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 202 (478)
+|.+.+.||.|+||.||+|.+..+++.||+|.+...... ....+.+.+|+.+++.++|+||+++++++..
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-- 79 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETT-- 79 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc--
Confidence 588899999999999999999889999999998643211 1123567789999999999999999998876
Q ss_pred CceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccC
Q 011763 203 SCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSN 282 (478)
Q Consensus 203 ~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~ 282 (478)
...+++||||+.++.+..+......+++..++.++.||+.||.|||+++++|+||+|+||+++.++.++|+|||++....
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 159 (272)
T cd06629 80 EEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSD 159 (272)
T ss_pred CCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccc
Confidence 57799999999987666655555689999999999999999999999999999999999999999999999999987543
Q ss_pred CCCCC-CccccccCCcccCcccccCCC-CCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccC
Q 011763 283 TGHRQ-PLTSRVVTLWYRPPELLLGAT-DYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKS 360 (478)
Q Consensus 283 ~~~~~-~~~~~~~t~~y~APE~l~~~~-~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 360 (478)
..... ......++..|+|||++.... .++.++|+||||+++|+|++|..||......+.+..+......+
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------- 231 (272)
T cd06629 160 DIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAP-------- 231 (272)
T ss_pred ccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCC--------
Confidence 22111 122345688999999987533 47889999999999999999999997655544433322110000
Q ss_pred CCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 361 KLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 361 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
.........++..+.+||.+||..||++|||+.++|+||||
T Consensus 232 ---------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 232 ---------------PIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred ---------------cCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 00011224678899999999999999999999999999997
No 217
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.8e-41 Score=328.02 Aligned_cols=258 Identities=28% Similarity=0.432 Sum_probs=208.5
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecC----C
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSRL----S 203 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~----~ 203 (478)
.++|++.+.||.|+||.||+|.+..+++.|++|++.... .....+.+|+.+++++ .|+||+++++++.... .
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE---DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 578999999999999999999998889999999987543 2345678999999999 7999999999987633 4
Q ss_pred ceEEEEEeeccCCchhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeeccccc
Q 011763 204 CSIYLVFEYMEHDITGLLSC----PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLAN 279 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~----~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~ 279 (478)
..+|+||||++++.+..+.. .+..+++..++.++.||+.||.|||+++++|+||+|+||+++.++.++|+|||++.
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~ 161 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSA 161 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccce
Confidence 56899999999865554432 24578999999999999999999999999999999999999999999999999987
Q ss_pred ccCCCCCCCccccccCCcccCcccccC----CCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCch
Q 011763 280 FSNTGHRQPLTSRVVTLWYRPPELLLG----ATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDD 355 (478)
Q Consensus 280 ~~~~~~~~~~~~~~~t~~y~APE~l~~----~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~ 355 (478)
...... .......++..|+|||++.. ...++.++|||||||+||+|++|++||........+.++... ++..
T Consensus 162 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~ 237 (275)
T cd06608 162 QLDSTL-GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN---PPPT 237 (275)
T ss_pred ecccch-hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhcc---CCCC
Confidence 543321 22234567889999998753 234678999999999999999999999876655555444321 1100
Q ss_pred hhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 356 YWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
. .....++..+.+||.+||..||++|||+.++++|||+
T Consensus 238 ~-----------------------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 238 L-----------------------KSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred C-----------------------CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 0 0012367889999999999999999999999999996
No 218
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.9e-41 Score=330.20 Aligned_cols=257 Identities=26% Similarity=0.432 Sum_probs=205.6
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeec----CC
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSR----LS 203 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~----~~ 203 (478)
...|++.+.||.|+||.||++.+..+++.||+|++.... .....+..|+.++.++ +|+||+++++++... ..
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 91 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHD 91 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCC
Confidence 357999999999999999999999999999999986542 3345677899999998 799999999988532 24
Q ss_pred ceEEEEEeeccCCchhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeeccccccc
Q 011763 204 CSIYLVFEYMEHDITGLLSC--PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFS 281 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~ 281 (478)
..+|++|||++++.+..+.. ....+++..++.++.||+.||.|||+++|+|+||+|+||++++++.++|+|||++...
T Consensus 92 ~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~ 171 (282)
T cd06636 92 DQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 171 (282)
T ss_pred CEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhh
Confidence 57899999999865554433 2345889999999999999999999999999999999999999999999999998754
Q ss_pred CCCCCCCccccccCCcccCcccccC----CCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhh
Q 011763 282 NTGHRQPLTSRVVTLWYRPPELLLG----ATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYW 357 (478)
Q Consensus 282 ~~~~~~~~~~~~~t~~y~APE~l~~----~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~ 357 (478)
.... .......+++.|+|||++.. ...++.++|||||||++|+|++|.+||........+..+... .+.
T Consensus 172 ~~~~-~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~---~~~--- 244 (282)
T cd06636 172 DRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN---PPP--- 244 (282)
T ss_pred hccc-cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhC---CCC---
Confidence 3221 12234567889999998753 245788999999999999999999999766554443332211 000
Q ss_pred ccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 358 KKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
......++.++.+||.+||..||.+|||+.|+|+||||
T Consensus 245 ---------------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 245 ---------------------KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred ---------------------CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 00013578899999999999999999999999999997
No 219
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4.9e-41 Score=328.95 Aligned_cols=259 Identities=27% Similarity=0.429 Sum_probs=207.3
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecC---Cc
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSRL---SC 204 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~---~~ 204 (478)
.++|++.+.||.|+||.||++.+..+++.+|+|++.... .....+.+|+.+++++ +||||+++++++.... ..
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 97 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS---DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGG 97 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc---cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCC
Confidence 568999999999999999999999999999999986432 2235567899999999 8999999999986532 24
Q ss_pred eEEEEEeeccCCchhhcc----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccc
Q 011763 205 SIYLVFEYMEHDITGLLS----CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANF 280 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~----~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~ 280 (478)
..|+||||++++.+..+. .....+++..++.++.||+.||.|||+++|+|+||||+||+++.++.+||+|||++..
T Consensus 98 ~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~ 177 (291)
T cd06639 98 QLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQ 177 (291)
T ss_pred eeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchh
Confidence 689999999986665443 2345789999999999999999999999999999999999999999999999999876
Q ss_pred cCCCCCCCccccccCCcccCcccccCCC----CCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchh
Q 011763 281 SNTGHRQPLTSRVVTLWYRPPELLLGAT----DYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDY 356 (478)
Q Consensus 281 ~~~~~~~~~~~~~~t~~y~APE~l~~~~----~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~ 356 (478)
...... ......++..|+|||++.... .++.++|||||||++|+|++|++||........+..+... ++...
T Consensus 178 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~---~~~~~ 253 (291)
T cd06639 178 LTSTRL-RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRN---PPPTL 253 (291)
T ss_pred cccccc-cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcC---CCCCC
Confidence 543221 112345688899999875422 3678999999999999999999999877665555443221 11000
Q ss_pred hccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccC
Q 011763 357 WKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFS 417 (478)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~ 417 (478)
.....++..+.+||.+||..||++||++.++|.||||+
T Consensus 254 -----------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 254 -----------------------LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred -----------------------CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 00123567899999999999999999999999999994
No 220
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.3e-41 Score=325.85 Aligned_cols=254 Identities=29% Similarity=0.489 Sum_probs=208.7
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|++.+.||.|+||.||++.+..+++.|++|.+.... ..+.+.+|+.+++.++|+||+++++++.. ....|+
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~~~l 75 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE----DLQEIIKEISILKQCDSPYIVKYYGSYFK--NTDLWI 75 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH----HHHHHHHHHHHHHhCCCCcEeeeeeeeec--CCcEEE
Confidence 358999999999999999999998889999999987432 25678899999999999999999999987 577999
Q ss_pred EEeeccCCchhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 209 VFEYMEHDITGLLS-CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 209 v~e~~~~~ll~~~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
++||++++.+..+. .....+++..++.++.||+.||.|||+.+|+|+||+|+||+++.++.++|+|||++........
T Consensus 76 ~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (256)
T cd06612 76 VMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA- 154 (256)
T ss_pred EEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc-
Confidence 99999986655443 3456789999999999999999999999999999999999999999999999999976543321
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccc
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATL 367 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 367 (478)
......++..|+|||++.+ ..++.++|||||||++|+|++|++||...........+.. ..+..
T Consensus 155 ~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~------------ 218 (256)
T cd06612 155 KRNTVIGTPFWMAPEVIQE-IGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN---KPPPT------------ 218 (256)
T ss_pred ccccccCCccccCHHHHhc-CCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhcc---CCCCC------------
Confidence 2223446888999999876 5789999999999999999999999987655443322211 00000
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
......++..+.+||.+||+.||.+|||+.++|.||||
T Consensus 219 -----------~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 219 -----------LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred -----------CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 00012467889999999999999999999999999997
No 221
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.4e-41 Score=331.74 Aligned_cols=258 Identities=25% Similarity=0.385 Sum_probs=211.3
Q ss_pred cccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEE
Q 011763 128 RADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 128 ~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
+.++|++++.||+|+||+||++.+..+++.||+|++.... .....+.+.+|+++++.++||||+++++++.. ...+|
T Consensus 3 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~ 79 (284)
T cd06620 3 RNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLN--ENNIC 79 (284)
T ss_pred cHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEec--CCEEE
Confidence 3578999999999999999999999999999999987543 34456778899999999999999999999987 57899
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
|||||++++.+..+......+++..+..++.||+.+|.|||+ ++++|+||+|+||++++++.++|+|||++.......
T Consensus 80 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~- 158 (284)
T cd06620 80 MCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI- 158 (284)
T ss_pred EEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc-
Confidence 999999987777666556679999999999999999999997 599999999999999999999999999986442211
Q ss_pred CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChH-----------HHHHHHHHHcCCCCch
Q 011763 287 QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEV-----------EQLHKIFKLCGSPPDD 355 (478)
Q Consensus 287 ~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~-----------~~~~~i~~~~g~~~~~ 355 (478)
.....++..|+|||++.+ ..++.++|||||||++|+|++|..||...... +.+..+.. ..+..
T Consensus 159 --~~~~~~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 232 (284)
T cd06620 159 --ADTFVGTSTYMSPERIQG-GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQ---EPPPR 232 (284)
T ss_pred --cCccccCcccCCHHHHcc-CCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhh---ccCCC
Confidence 123467889999999876 57889999999999999999999999865542 11111111 00000
Q ss_pred hhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 356 YWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
. ....++.++.+||.+||..||.+|||+.|+++|+||...
T Consensus 233 ------------------~------~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 233 ------------------L------PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred ------------------C------CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 0 001367789999999999999999999999999999763
No 222
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=3e-41 Score=325.04 Aligned_cols=252 Identities=28% Similarity=0.396 Sum_probs=207.7
Q ss_pred eeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeeccCC
Q 011763 138 IGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHD 216 (478)
Q Consensus 138 LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~~~ 216 (478)
||.|+||.||++++..+++.||+|++..... .....+.+.+|+.+++.++||||+++++++.+ +...|+||||++++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~ 78 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKD--KKYIYMLMEYCLGG 78 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEc--CCccEEEEecCCCC
Confidence 6899999999999998999999999976543 23445678899999999999999999998876 67799999999987
Q ss_pred chhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccccCC
Q 011763 217 ITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTL 296 (478)
Q Consensus 217 ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~t~ 296 (478)
.+..+......+++..+..++.||+.||.|||+++++|+||+|+||+++.++.++|+|||++....... ......+++
T Consensus 79 ~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~ 156 (262)
T cd05572 79 ELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTFCGTP 156 (262)
T ss_pred cHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--ccccccCCc
Confidence 776666555678999999999999999999999999999999999999999999999999997665432 122346788
Q ss_pred cccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCC
Q 011763 297 WYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRT--EVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPY 374 (478)
Q Consensus 297 ~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~--~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 374 (478)
.|++||.+.+ ..++.++|+|||||++|+|++|..||.... ..+....+......+.
T Consensus 157 ~~~~PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------- 214 (262)
T cd05572 157 EYVAPEIILN-KGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLE--------------------- 214 (262)
T ss_pred CccChhHhcC-CCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCC---------------------
Confidence 9999999875 668899999999999999999999998776 4444444332111000
Q ss_pred CccchhcccCCchhHHHHHHHhcCCCCCCccC-----HHHHHhCcccCCCCC
Q 011763 375 DSSLRETFKDLPTTAVNLIETLLSVEPYKRAT-----ASAALASEYFSTKPY 421 (478)
Q Consensus 375 ~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t-----a~e~L~hp~f~~~~~ 421 (478)
.....++++.++|.+||..||++|++ +.|+++||||++..|
T Consensus 215 ------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~ 260 (262)
T cd05572 215 ------FPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDW 260 (262)
T ss_pred ------CCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCC
Confidence 00234788999999999999999999 999999999986443
No 223
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=4.3e-41 Score=322.50 Aligned_cols=255 Identities=32% Similarity=0.503 Sum_probs=210.6
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC---ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF---EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
+|+..+.||+|+||.||+|.+..+++.|++|.+..... ..+..+.+.+|+.+++.++|+||+++++++.. ...+|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~ 78 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTERE--EDNLY 78 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEec--CCeEE
Confidence 47788999999999999999988899999999875432 24456778899999999999999999998876 57799
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
++|||+++..+..+......+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++.......
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~-- 156 (258)
T cd06632 79 IFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS-- 156 (258)
T ss_pred EEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc--
Confidence 999999987666665555578999999999999999999999999999999999999999999999999987654322
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccc
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATL 367 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 367 (478)
......++..|+|||.+.....++.++|+|||||++|+|++|+.||......+....+.... ..+
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~-------------- 221 (258)
T cd06632 157 FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSK-ELP-------------- 221 (258)
T ss_pred cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcc-cCC--------------
Confidence 22345678899999998763348899999999999999999999998766544444432211 000
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
.....+++.+.+||.+||..||.+||++.++|.|||+
T Consensus 222 ------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 222 ------------PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred ------------CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 0113567889999999999999999999999999996
No 224
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-44 Score=324.26 Aligned_cols=289 Identities=35% Similarity=0.554 Sum_probs=236.2
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCc---eE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSC---SI 206 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~---~~ 206 (478)
.+.+-.+.||.|+||.||.+.|..+|+.||+|++..-...-...+.+.+|+++|..++|.|++..+++.+...-+ .+
T Consensus 53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred ccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence 356777899999999999999999999999999864433445567788999999999999999998887653222 36
Q ss_pred EEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 207 YLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 207 ~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
|+|.|+|..++...+..+ ..++.+.++-+++||+.||.|||+.+|.||||||.|+|++.+..+||||||+++.-.....
T Consensus 133 YV~TELmQSDLHKIIVSP-Q~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~ 211 (449)
T KOG0664|consen 133 YVLTELMQSDLHKIIVSP-QALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDR 211 (449)
T ss_pred HHHHHHHHhhhhheeccC-CCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhh
Confidence 889999988776665544 4899999999999999999999999999999999999999999999999999998777666
Q ss_pred CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCC---C
Q 011763 287 QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL---P 363 (478)
Q Consensus 287 ~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~---~ 363 (478)
..++..+.|..|+|||+++|...|+.++||||+|||+.||+..+-+|...+..++++.|.+++|.|..+.++.... .
T Consensus 212 ~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~ 291 (449)
T KOG0664|consen 212 LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKN 291 (449)
T ss_pred hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHH
Confidence 7777788899999999999999999999999999999999999999999999999999999999999776543211 0
Q ss_pred CccccCCCCCCCccchhcc--cCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 364 HATLFKPQQPYDSSLRETF--KDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 364 ~~~~~~~~~~~~~~l~~~~--~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
+...-.+.++-.+.|-..- .+-..+..+++..||..||++|++..++|.|++..+.
T Consensus 292 H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~ 349 (449)
T KOG0664|consen 292 HVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEG 349 (449)
T ss_pred HhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccccc
Confidence 1000111111111111111 1334568899999999999999999999999998653
No 225
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=9.8e-42 Score=328.70 Aligned_cols=254 Identities=27% Similarity=0.408 Sum_probs=208.3
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
++|++.+.||.|+||.||++.+..+++.||+|.+..... ......+.+|+.+++.++||||+++++++.. ...++++
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv 77 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYN--NGDISIC 77 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeec--CCEEEEE
Confidence 368899999999999999999999999999999976543 3555677889999999999999999999877 5789999
Q ss_pred EeeccCCchhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 210 FEYMEHDITGLLSCP-DIKFSEAQIKCYMNQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~-~~~l~~~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
+||+++..+..+... ...+++..+..++.||+.||.|||+ .+++|+||||+||++++++.++|+|||.+........
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 156 (265)
T cd06605 78 MEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA- 156 (265)
T ss_pred EEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh-
Confidence 999997555555443 3689999999999999999999999 9999999999999999999999999999865532211
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHcCCCCchhhccCCC
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRT-----EVEQLHKIFKLCGSPPDDYWKKSKL 362 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~-----~~~~~~~i~~~~g~~~~~~~~~~~~ 362 (478)
....++..|+|||++.+ ..++.++|||||||++|+|++|..||.... ..+.+..+.. ..+..
T Consensus 157 --~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~------- 223 (265)
T cd06605 157 --KTFVGTSSYMAPERIQG-NDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVN---EPPPR------- 223 (265)
T ss_pred --hcccCChhccCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhc---CCCCC-------
Confidence 12567888999999876 578999999999999999999999997542 2222222221 11000
Q ss_pred CCccccCCCCCCCccchhccc-CCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 363 PHATLFKPQQPYDSSLRETFK-DLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~l~~~~~-~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
... .++.++.+||.+||..||.+|||+.+++.||||+.
T Consensus 224 ------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~ 262 (265)
T cd06605 224 ------------------LPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKK 262 (265)
T ss_pred ------------------CChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhc
Confidence 001 26888999999999999999999999999999975
No 226
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=4.8e-41 Score=331.30 Aligned_cols=258 Identities=21% Similarity=0.268 Sum_probs=199.7
Q ss_pred ccceeeeeeeeecCceEEEEEEECC----------------CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCee
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLD----------------TGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNII 192 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~----------------~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv 192 (478)
.++|.+.++||+|+||.||+|.+.. ++..||+|++.... .......+.+|+.+|.+++||||+
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCee
Confidence 4589999999999999999997532 34579999987543 344556788999999999999999
Q ss_pred eecceeeecCCceEEEEEeeccCCchhhccCC-------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCce
Q 011763 193 KLEGLITSRLSCSIYLVFEYMEHDITGLLSCP-------------------DIKFSEAQIKCYMNQLLHGLEHCHSRGVL 253 (478)
Q Consensus 193 ~l~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~-------------------~~~l~~~~~~~i~~qil~aL~~LH~~giv 253 (478)
++++++.+ ....||||||+.++.+..+... ...+++..+..++.||+.||.|||++||+
T Consensus 83 ~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~iv 160 (304)
T cd05096 83 RLLGVCVD--EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFV 160 (304)
T ss_pred EEEEEEec--CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 99999987 5678999999987655433221 12467888999999999999999999999
Q ss_pred eccCCCCcEEEecCCcEEEeecccccccCCCCCC-CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh--CC
Q 011763 254 HRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI--GK 330 (478)
Q Consensus 254 HrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~-~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt--G~ 330 (478)
||||||+|||++.++.+||+|||++......... ......++..|+|||++.+ ..++.++|||||||++|+|++ +.
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILM-GKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhc-CCCCchhhhHHHHHHHHHHHHccCC
Confidence 9999999999999999999999999755332211 1122344778999999876 678999999999999999987 56
Q ss_pred CCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHH
Q 011763 331 PILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAA 410 (478)
Q Consensus 331 ~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~ 410 (478)
.||...+..+.+..+...+....... .....+.++..+.+||.+||..||.+|||+.++
T Consensus 240 ~p~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i 298 (304)
T cd05096 240 QPYGELTDEQVIENAGEFFRDQGRQV---------------------YLFRPPPCPQGLYELMLQCWSRDCRERPSFSDI 298 (304)
T ss_pred CCCCcCCHHHHHHHHHHHhhhccccc---------------------cccCCCCCCHHHHHHHHHHccCCchhCcCHHHH
Confidence 78887776665555433211100000 000113567889999999999999999999999
Q ss_pred H
Q 011763 411 L 411 (478)
Q Consensus 411 L 411 (478)
.
T Consensus 299 ~ 299 (304)
T cd05096 299 H 299 (304)
T ss_pred H
Confidence 5
No 227
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2.5e-41 Score=328.71 Aligned_cols=256 Identities=26% Similarity=0.380 Sum_probs=203.4
Q ss_pred eeecCceEEEEEEECCCCcEEEEEEeecCCCC-hHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeeccCC
Q 011763 138 IGQGTYSSVFRARDLDTGKIVALKKVRFDNFE-PESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHD 216 (478)
Q Consensus 138 LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~~~ 216 (478)
||+|+||+||+|.+..+++.||+|++...... ......+..|+.+|+.++||||+++++++.. ....|+||||++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~~ 78 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFET--KDDLCLVMTLMNGG 78 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEec--CCeEEEEEecCCCC
Confidence 68999999999999999999999998754332 2234455689999999999999999999877 56799999999986
Q ss_pred chhhccCCC--CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCcccccc
Q 011763 217 ITGLLSCPD--IKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVV 294 (478)
Q Consensus 217 ll~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~ 294 (478)
.+..+.... ..+++..+..++.||+.||.|||++|++|+||+|+||++++++.++|+|||++...... .......+
T Consensus 79 ~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~ 156 (277)
T cd05577 79 DLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG--KKIKGRAG 156 (277)
T ss_pred cHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC--CccccccC
Confidence 665443332 36899999999999999999999999999999999999999999999999998765432 22233456
Q ss_pred CCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCC
Q 011763 295 TLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPY 374 (478)
Q Consensus 295 t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 374 (478)
+..|+|||++.+ ..++.++|||||||++|+|++|+.||...........+....-..
T Consensus 157 ~~~y~~PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------- 213 (277)
T cd05577 157 TPGYMAPEVLQG-EVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEM---------------------- 213 (277)
T ss_pred CCCcCCHHHhcC-CCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccc----------------------
Confidence 788999999876 558899999999999999999999998765422222221110000
Q ss_pred CccchhcccCCchhHHHHHHHhcCCCCCCcc-----CHHHHHhCcccCCCCCCC
Q 011763 375 DSSLRETFKDLPTTAVNLIETLLSVEPYKRA-----TASAALASEYFSTKPYAC 423 (478)
Q Consensus 375 ~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~-----ta~e~L~hp~f~~~~~~~ 423 (478)
.......+++.+.+||.+||..||.+|| ++.+++.||||+...+..
T Consensus 214 ---~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~ 264 (277)
T cd05577 214 ---AVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRR 264 (277)
T ss_pred ---cccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChhh
Confidence 0011135688999999999999999999 999999999998766543
No 228
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=5.9e-41 Score=327.27 Aligned_cols=258 Identities=29% Similarity=0.445 Sum_probs=204.9
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeee---cCCc
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITS---RLSC 204 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~---~~~~ 204 (478)
.++|++++.||+|+||.||++.+..+++.||+|++.... .....+.+|+.+++.+ +||||+++++++.. ..+.
T Consensus 17 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~ 93 (286)
T cd06638 17 SDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH---DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGD 93 (286)
T ss_pred ccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc---chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCC
Confidence 678999999999999999999999999999999876432 2234567899999999 79999999998743 2346
Q ss_pred eEEEEEeeccCCchhhcc----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccc
Q 011763 205 SIYLVFEYMEHDITGLLS----CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANF 280 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~----~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~ 280 (478)
..|+||||++++.+..+. .....+++..+..++.||+.||.|||+++|+||||||+||++++++.+||+|||++..
T Consensus 94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~ 173 (286)
T cd06638 94 QLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQ 173 (286)
T ss_pred eEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCceee
Confidence 789999999986655432 2345689999999999999999999999999999999999999999999999999876
Q ss_pred cCCCCCCCccccccCCcccCcccccC----CCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchh
Q 011763 281 SNTGHRQPLTSRVVTLWYRPPELLLG----ATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDY 356 (478)
Q Consensus 281 ~~~~~~~~~~~~~~t~~y~APE~l~~----~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~ 356 (478)
..... .......+++.|+|||++.. ...++.++|||||||++|+|++|+.||........+.++... .+..
T Consensus 174 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~---~~~~- 248 (286)
T cd06638 174 LTSTR-LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN---PPPT- 248 (286)
T ss_pred cccCC-CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc---CCCc-
Confidence 54322 12233467899999998753 244788999999999999999999999876554433322110 0000
Q ss_pred hccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 357 WKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
. .....++..+.+||.+||+.||++|||+.++|+|+||
T Consensus 249 ----------~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 249 ----------L------------HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred ----------c------------cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 0 0001356789999999999999999999999999997
No 229
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-42 Score=358.03 Aligned_cols=254 Identities=23% Similarity=0.393 Sum_probs=203.5
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcC-CCCeeeecc-eeeec---C-
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLD-HPNIIKLEG-LITSR---L- 202 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~-~~~~~---~- 202 (478)
..++++.+.|.+|||+.||+|++...+..||+|++-.. +....+.+.+||.+|+.|. |+|||.+++ ..... .
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence 56899999999999999999999888899999998755 6778888999999999995 999999999 33221 1
Q ss_pred CceEEEEEeecc-CCchhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceeccCCCCcEEEecCCcEEEeecccc
Q 011763 203 SCSIYLVFEYME-HDITGLLSC-PDIKFSEAQIKCYMNQLLHGLEHCHSRG--VLHRDIKGSNLLVNNEGVLKLADFGLA 278 (478)
Q Consensus 203 ~~~~~lv~e~~~-~~ll~~~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~g--ivHrDlkp~NILl~~~~~vkl~DFG~a 278 (478)
...++|.||||. +++++.+.. ....|++.++++|+.|+++|+.+||... |||||||-|||||..+|++||||||.|
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 245789999999 477777653 2234999999999999999999999997 999999999999999999999999999
Q ss_pred cccCCCCCCC--------ccccccCCcccCccccc--CCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 011763 279 NFSNTGHRQP--------LTSRVVTLWYRPPELLL--GATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKL 348 (478)
Q Consensus 279 ~~~~~~~~~~--------~~~~~~t~~y~APE~l~--~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~ 348 (478)
.-.-...... ......|+.|+|||++. .....+.|+|||+|||+||-|+....||.......++ ..
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIl----ng 269 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAIL----NG 269 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEE----ec
Confidence 6432211110 01124499999999974 3467899999999999999999999999865433222 11
Q ss_pred cCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcc
Q 011763 349 CGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEY 415 (478)
Q Consensus 349 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~ 415 (478)
-...|+ ++.++..+++||+.||+.||.+||++.|++.+-+
T Consensus 270 ~Y~~P~---------------------------~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~ 309 (738)
T KOG1989|consen 270 NYSFPP---------------------------FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIF 309 (738)
T ss_pred cccCCC---------------------------CccHHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence 111111 2467889999999999999999999999996644
No 230
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2.9e-41 Score=328.88 Aligned_cols=253 Identities=25% Similarity=0.386 Sum_probs=198.8
Q ss_pred eeeecCceEEEEEEECCCCcEEEEEEeecCCCChHH-HHHHHHHHHHHH---hcCCCCeeeecceeeecCCceEEEEEee
Q 011763 137 KIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPES-VRFMAREILILR---RLDHPNIIKLEGLITSRLSCSIYLVFEY 212 (478)
Q Consensus 137 ~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~-~~~~~~E~~~l~---~l~h~nIv~l~~~~~~~~~~~~~lv~e~ 212 (478)
.||+|+||.||++.+..+++.||+|.+......... .....+|..+++ ..+||||+.+++++.. .+..|+||||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~lv~e~ 78 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT--PDKLCFILDL 78 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec--CCeEEEEEec
Confidence 489999999999999999999999999765432222 222334444443 3479999999998877 5679999999
Q ss_pred ccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCcccc
Q 011763 213 MEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSR 292 (478)
Q Consensus 213 ~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~ 292 (478)
++++.+..+......+++..+..++.||+.||.|||+++|+|+||||+|||++.++.++|+|||++....... ....
T Consensus 79 ~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---~~~~ 155 (279)
T cd05633 79 MNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PHAS 155 (279)
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC---ccCc
Confidence 9987776666566679999999999999999999999999999999999999999999999999986543321 1234
Q ss_pred ccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHcCCCCchhhccCCCCCccccCC
Q 011763 293 VVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEV--EQLHKIFKLCGSPPDDYWKKSKLPHATLFKP 370 (478)
Q Consensus 293 ~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~--~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 370 (478)
.+++.|+|||++.+...++.++|||||||++|+|++|..||...... ..+..+.. ..+
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~---~~~----------------- 215 (279)
T cd05633 156 VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL---TVN----------------- 215 (279)
T ss_pred CCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhh---cCC-----------------
Confidence 67999999998865456889999999999999999999999764322 11211110 000
Q ss_pred CCCCCccchhcccCCchhHHHHHHHhcCCCCCCcc-----CHHHHHhCcccCCCCCC
Q 011763 371 QQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRA-----TASAALASEYFSTKPYA 422 (478)
Q Consensus 371 ~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~-----ta~e~L~hp~f~~~~~~ 422 (478)
......++.++.+||.+||..||.+|+ |+.++++||||+...+.
T Consensus 216 --------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~ 264 (279)
T cd05633 216 --------VELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQ 264 (279)
T ss_pred --------cCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCHh
Confidence 011235788999999999999999999 69999999999886543
No 231
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=3.6e-41 Score=327.25 Aligned_cols=258 Identities=30% Similarity=0.512 Sum_probs=210.3
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcC---CCCeeeecceeeecCCceEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLD---HPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~~~~~ 207 (478)
.|++++.||.|+||.||+|.+..+++.||+|.++... .......+.+|+.+++.+. ||||+++++++.. ....|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~--~~~~~ 78 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK--GPRLW 78 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC-CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee--CCEEE
Confidence 5888999999999999999999999999999987543 3344566778999999996 9999999999876 67899
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
+||||++++.+..+.... .+++..+..++.||+.||.|||+.||+|+||+|+||++++++.++|+|||++....... .
T Consensus 79 lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-~ 156 (277)
T cd06917 79 IIMEYAEGGSVRTLMKAG-PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS-S 156 (277)
T ss_pred EEEecCCCCcHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc-c
Confidence 999999987666555443 78999999999999999999999999999999999999999999999999997665432 2
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccc
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATL 367 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 367 (478)
......++..|+|||.+.+...++.++|||||||++|+|++|.+||...........+... .++
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~--~~~-------------- 220 (277)
T cd06917 157 KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS--KPP-------------- 220 (277)
T ss_pred ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC--CCC--------------
Confidence 2234467889999999876566789999999999999999999999876543332211100 000
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCC
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKP 420 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~ 420 (478)
.+. ...++.++.++|.+||+.||++||++.+++.|+||++..
T Consensus 221 ---------~~~--~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 221 ---------RLE--DNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred ---------CCC--cccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 000 013678899999999999999999999999999997643
No 232
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=7.8e-41 Score=326.87 Aligned_cols=257 Identities=27% Similarity=0.489 Sum_probs=211.7
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
.|...+.||.|++|.||++.+..+++.|++|++.... ....+.+.+|+.+++.++||||+++++++.. ....|+|+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~--~~~~~~v~ 95 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK--QQRRELLFNEVVIMRDYQHPNIVEMYSSYLV--GDELWVVM 95 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHHcCCCChheEEEEEEc--CCeEEEEE
Confidence 5777789999999999999998899999999986543 2334567889999999999999999998876 67799999
Q ss_pred eeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCcc
Q 011763 211 EYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLT 290 (478)
Q Consensus 211 e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~ 290 (478)
||+.++.+..+... ..+++..+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||++........ ...
T Consensus 96 e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~-~~~ 173 (285)
T cd06648 96 EFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP-RRK 173 (285)
T ss_pred eccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc-ccc
Confidence 99988666655544 4689999999999999999999999999999999999999999999999998865443221 123
Q ss_pred ccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCC
Q 011763 291 SRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKP 370 (478)
Q Consensus 291 ~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 370 (478)
...+++.|+|||++.+ ..++.++|||||||++|+|++|+.||...+....+..+... .++.
T Consensus 174 ~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~--~~~~---------------- 234 (285)
T cd06648 174 SLVGTPYWMAPEVISR-LPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN--LPPK---------------- 234 (285)
T ss_pred cccCCccccCHHHhcC-CCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc--CCCC----------------
Confidence 3467889999999876 56889999999999999999999999887766666554332 1100
Q ss_pred CCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCC
Q 011763 371 QQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKP 420 (478)
Q Consensus 371 ~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~ 420 (478)
+ .....++..+.+||.+||..||++|||+.++|+||||++..
T Consensus 235 -------~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 276 (285)
T cd06648 235 -------L-KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAG 276 (285)
T ss_pred -------C-cccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCC
Confidence 0 00123678899999999999999999999999999998744
No 233
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.3e-40 Score=325.53 Aligned_cols=262 Identities=27% Similarity=0.390 Sum_probs=207.3
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
++|++.+.||.|++|.||++.+..+++.||+|.+..... ......+.+|+++++.++||||++++++|.......+|+|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN-PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc-hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 479999999999999999999999999999999975532 3445678889999999999999999999876556679999
Q ss_pred EeeccCCchhhc----cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC
Q 011763 210 FEYMEHDITGLL----SCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH 285 (478)
Q Consensus 210 ~e~~~~~ll~~~----~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~ 285 (478)
|||++++.+..+ ......+++..+..++.||+.||.|||+.+++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 159 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL 159 (287)
T ss_pred EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccccc
Confidence 999987655432 2334568999999999999999999999999999999999999999999999999986543321
Q ss_pred CCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHHcCCCCchhhccC
Q 011763 286 RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTE-----VEQLHKIFKLCGSPPDDYWKKS 360 (478)
Q Consensus 286 ~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~-----~~~~~~i~~~~g~~~~~~~~~~ 360 (478)
. ....++..|+|||.+.+ ..++.++|||||||++|+|++|..||..... .+....+... .....
T Consensus 160 ~---~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~---- 228 (287)
T cd06621 160 A---GTFTGTSFYMAPERIQG-KPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM---PNPEL---- 228 (287)
T ss_pred c---ccccCCccccCHHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC---Cchhh----
Confidence 1 23346788999998876 6789999999999999999999999986522 2222222110 00000
Q ss_pred CCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 361 KLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 361 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
.... ..-...++.+.+||.+||..||.+|||+.|++.||||++
T Consensus 229 --------------~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~ 271 (287)
T cd06621 229 --------------KDEP-GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKA 271 (287)
T ss_pred --------------ccCC-CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccc
Confidence 0000 000134678999999999999999999999999999965
No 234
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=2.7e-41 Score=330.08 Aligned_cols=262 Identities=21% Similarity=0.328 Sum_probs=206.7
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcC-CCCeeeecceeeecCCceEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLD-HPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~ 207 (478)
.++|+..+.||+|+||.||++.+..+++.||+|++...... .....+.+|+.++.++. |+||+++++++.. ....+
T Consensus 3 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~--~~~~~ 79 (288)
T cd06616 3 AEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFR--EGDCW 79 (288)
T ss_pred HHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEec--CCcEE
Confidence 34788899999999999999999999999999998765433 44566788999999995 9999999998876 56788
Q ss_pred EEEeeccCCchhhc----cCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCcEEEecCCcEEEeecccccccC
Q 011763 208 LVFEYMEHDITGLL----SCPDIKFSEAQIKCYMNQLLHGLEHCHSR-GVLHRDIKGSNLLVNNEGVLKLADFGLANFSN 282 (478)
Q Consensus 208 lv~e~~~~~ll~~~----~~~~~~l~~~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~~~~vkl~DFG~a~~~~ 282 (478)
++|||+...+.... ......+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 80 ~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 80 ICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred EEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 99999987543322 12345799999999999999999999975 99999999999999999999999999987543
Q ss_pred CCCCCCccccccCCcccCcccccCC--CCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccC
Q 011763 283 TGHRQPLTSRVVTLWYRPPELLLGA--TDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKS 360 (478)
Q Consensus 283 ~~~~~~~~~~~~t~~y~APE~l~~~--~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 360 (478)
... ......+++.|+|||++.+. ..++.++|||||||++|+|++|++||..... ....+.+.....+...
T Consensus 160 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~~~---- 231 (288)
T cd06616 160 DSI--AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVKGDPPIL---- 231 (288)
T ss_pred cCC--ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcCCCCCcC----
Confidence 221 12334568889999998764 3689999999999999999999999976542 2222222211111100
Q ss_pred CCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 361 KLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 361 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
.......++.++.+||.+||..||.+|||+.++++||||..
T Consensus 232 -----------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 272 (288)
T cd06616 232 -----------------SNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD 272 (288)
T ss_pred -----------------CCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence 00011357889999999999999999999999999999975
No 235
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=3.4e-41 Score=331.51 Aligned_cols=259 Identities=26% Similarity=0.457 Sum_probs=212.6
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
..|.....||.|+||.||++.+..+++.||+|++..... ...+.+.+|+.++..++||||+++++++.. +...|+|
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~--~~~~~iv 96 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHQNVVEMYKSYLV--GEELWVL 96 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc--chHHHHHHHHHHHHhCCCCchhhhhhheee--CCeEEEE
Confidence 356667789999999999999988999999999875432 234567789999999999999999999887 6789999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL 289 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 289 (478)
|||++++.+..+... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++....... ...
T Consensus 97 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-~~~ 174 (297)
T cd06659 97 MEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKR 174 (297)
T ss_pred EecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhccccc-ccc
Confidence 999998776665543 468999999999999999999999999999999999999999999999999986544322 122
Q ss_pred cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccC
Q 011763 290 TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFK 369 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 369 (478)
....++..|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+.+..+... ++ ..
T Consensus 175 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~-~~------------- 236 (297)
T cd06659 175 KSLVGTPYWMAPEVISR-TPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS---PP-PK------------- 236 (297)
T ss_pred cceecCccccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcc---CC-CC-------------
Confidence 33567899999999876 56899999999999999999999999887766655544221 10 00
Q ss_pred CCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCC
Q 011763 370 PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPY 421 (478)
Q Consensus 370 ~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~ 421 (478)
......++..+.++|.+||+.||.+||++.++++||||.+...
T Consensus 237 ---------~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 237 ---------LKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred ---------ccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 0111356788999999999999999999999999999987544
No 236
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.4e-41 Score=343.09 Aligned_cols=253 Identities=21% Similarity=0.293 Sum_probs=199.1
Q ss_pred ccceeeeeeeeecCceEEEEEEECCC-----CcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecC
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDT-----GKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSRL 202 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~-----~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 202 (478)
.++|++.+.||+|+||.||+|++... +..||+|+++... .......+.+|+.+|+.+ +|+|||++++++..
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~-- 113 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA-HTDEREALMSELKILSHLGQHKNIVNLLGACTH-- 113 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC-CHHHHHHHHHHHHHHHhhccCCceeeEeeEecC--
Confidence 56899999999999999999986443 3579999997543 334456788999999999 89999999999877
Q ss_pred CceEEEEEeeccCCchhhccC-----------------------------------------------------------
Q 011763 203 SCSIYLVFEYMEHDITGLLSC----------------------------------------------------------- 223 (478)
Q Consensus 203 ~~~~~lv~e~~~~~ll~~~~~----------------------------------------------------------- 223 (478)
...+||||||+.++.+..+..
T Consensus 114 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (374)
T cd05106 114 GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQ 193 (374)
T ss_pred CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccc
Confidence 567999999998755443321
Q ss_pred -----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC-ccc
Q 011763 224 -----------PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP-LTS 291 (478)
Q Consensus 224 -----------~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~-~~~ 291 (478)
...++++..++.++.||+.||.|||++||+||||||+|||+++++.+||+|||+++......... ...
T Consensus 194 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~ 273 (374)
T cd05106 194 SSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN 273 (374)
T ss_pred cccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence 11247889999999999999999999999999999999999999999999999997654322111 112
Q ss_pred cccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCC
Q 011763 292 RVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKP 370 (478)
Q Consensus 292 ~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 370 (478)
..++..|+|||++.+ ..++.++|||||||++|+|++ |+.||........+..+......++
T Consensus 274 ~~~~~~y~aPE~~~~-~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~----------------- 335 (374)
T cd05106 274 ARLPVKWMAPESIFD-CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMS----------------- 335 (374)
T ss_pred CCCccceeCHHHhcC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCcc-----------------
Confidence 234567999999876 678999999999999999997 9999987655444444332111100
Q ss_pred CCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 371 QQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 371 ~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
....+++++.+||.+||+.||.+|||+.++++
T Consensus 336 ----------~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 336 ----------RPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred ----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00235789999999999999999999999975
No 237
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=3.9e-41 Score=327.98 Aligned_cols=253 Identities=23% Similarity=0.349 Sum_probs=205.0
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCC-----cEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTG-----KIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS 203 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~-----~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 203 (478)
.++|++++.||+|+||.||+|.+...+ ..||+|.+.... .......+.+|+.++..++||||+++++++.. .
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~--~ 80 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA-EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK--E 80 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC-CHHHHHHHHHHHHHHHhcCCcccceEEEEEcC--C
Confidence 458999999999999999999876554 689999987443 34455678899999999999999999999876 5
Q ss_pred ceEEEEEeeccCCchhhccCCC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecC
Q 011763 204 CSIYLVFEYMEHDITGLLSCPD----------------IKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE 267 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~~----------------~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~ 267 (478)
...|++|||++++.+..+.... ..+++..+..++.||+.||.|||+++|+|+||||+|||++++
T Consensus 81 ~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 81 QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEG 160 (283)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCC
Confidence 6789999999876554433211 458889999999999999999999999999999999999999
Q ss_pred CcEEEeecccccccCCCCC-CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 011763 268 GVLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKI 345 (478)
Q Consensus 268 ~~vkl~DFG~a~~~~~~~~-~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i 345 (478)
+.++|+|||++........ .......+++.|+|||++.+ ..++.++|||||||++|||++ |..||.+.+..+....+
T Consensus 161 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i 239 (283)
T cd05048 161 LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILY-GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMI 239 (283)
T ss_pred CcEEECCCcceeeccccccccccCCCcccccccCHHHhcc-CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 9999999999975533221 12233455788999998876 668999999999999999998 99999988776665554
Q ss_pred HHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 346 FKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 346 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
.... ++ .....++.++.+|+.+||+.||.+||++.+++++
T Consensus 240 ~~~~--~~--------------------------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 240 RSRQ--LL--------------------------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HcCC--cC--------------------------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 3311 00 0113578999999999999999999999999864
No 238
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-42 Score=346.23 Aligned_cols=249 Identities=27% Similarity=0.409 Sum_probs=208.1
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCceEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~ 207 (478)
.+.|++...+|.|+|+.|-.+.+..+++.+++|++.... ....+|+.++... +||||+++++++.+ +.+.|
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~------~~~~~e~~~~~~~~~h~niv~~~~v~~~--~~~~~ 392 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA------DDNQDEIPISLLVRDHPNIVKSHDVYED--GKEIY 392 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc------cccccccchhhhhcCCCcceeecceecC--Cceee
Confidence 678999999999999999999999999999999997552 1234577777666 89999999999988 78899
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEE-ecCCcEEEeecccccccCCCCC
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLV-NNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl-~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
+|||++.++.+...+.....+. .++..|++||+.|+.|||++|||||||||+|||+ +..++++|+|||+++.....
T Consensus 393 ~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-- 469 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-- 469 (612)
T ss_pred eeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh--
Confidence 9999999876655544443344 7888999999999999999999999999999999 58899999999999876643
Q ss_pred CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcc
Q 011763 287 QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHAT 366 (478)
Q Consensus 287 ~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 366 (478)
+.+.+.|..|.|||++.. ..|++++||||||++||+||+|+.||........ |...++.++..
T Consensus 470 --~~tp~~t~~y~APEvl~~-~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~e---i~~~i~~~~~s----------- 532 (612)
T KOG0603|consen 470 --CDTPALTLQYVAPEVLAI-QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIE---IHTRIQMPKFS----------- 532 (612)
T ss_pred --hcccchhhcccChhhhcc-CCCCcchhhHHHHHHHHHHHhCCCccccCCchHH---HHHhhcCCccc-----------
Confidence 345567899999999985 7899999999999999999999999998776622 22223333211
Q ss_pred ccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCC
Q 011763 367 LFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPY 421 (478)
Q Consensus 367 ~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~ 421 (478)
..+++.+++||..||+.||.+|+++.+++.||||..++.
T Consensus 533 ----------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~~~~t 571 (612)
T KOG0603|consen 533 ----------------ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFLSHPT 571 (612)
T ss_pred ----------------cccCHHHHHHHHHhccCChhhCcChhhhccCcchhcCCC
Confidence 368999999999999999999999999999999954443
No 239
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=4.7e-41 Score=326.22 Aligned_cols=255 Identities=33% Similarity=0.505 Sum_probs=213.0
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcC-CCCeeeecceeeecCCceEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLD-HPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~ 207 (478)
++|.+.+.||.|+||.||++.+..+++.||+|++..... .......+.+|+.+++++. |+||+++++++.. ....+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~--~~~~~ 78 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQD--EENLY 78 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcC--CceEE
Confidence 379999999999999999999999999999999876433 3344566778999999998 9999999999876 67799
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC-
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR- 286 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~- 286 (478)
+||||+.++.+..+......+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++........
T Consensus 79 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 79 FVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 9999997766655555555799999999999999999999999999999999999999999999999999876543221
Q ss_pred ------------------CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 011763 287 ------------------QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKL 348 (478)
Q Consensus 287 ------------------~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~ 348 (478)
.......++..|+|||++.. ..++.++|||||||++++|++|+.||...+....+..+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 237 (280)
T cd05581 159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE-KPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKL 237 (280)
T ss_pred ccCCCCCccccccccccccccccccCCccccCHHHhCC-CCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc
Confidence 11223456889999998876 56888999999999999999999999988766665555432
Q ss_pred cCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCH----HHHHhCccc
Q 011763 349 CGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATA----SAALASEYF 416 (478)
Q Consensus 349 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta----~e~L~hp~f 416 (478)
.... ...+++.+.+||.+||+.||.+|||+ .++|+||||
T Consensus 238 ~~~~-----------------------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 238 EYSF-----------------------------PPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred CCCC-----------------------------CCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 1111 12457889999999999999999999 999999998
No 240
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=8.3e-43 Score=341.42 Aligned_cols=291 Identities=30% Similarity=0.521 Sum_probs=235.3
Q ss_pred hhhhcccccccCcccccccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcC----
Q 011763 112 WLSAVAGEAIQGWVPLRADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLD---- 187 (478)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~---- 187 (478)
++....||.+ -.+|.+....|+|-|++|.+|.+...|+.||||+|+.+. -..+.=+.|++||++|+
T Consensus 421 YYrv~igE~L-------D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE---~M~KtGl~EleiLkKL~~AD~ 490 (752)
T KOG0670|consen 421 YYRVRIGELL-------DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE---VMHKTGLKELEILKKLNDADP 490 (752)
T ss_pred eEEEehhhhh-------cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch---HHhhhhhHHHHHHHHhhccCc
Confidence 3444555555 348999999999999999999999999999999998543 33344567999999994
Q ss_pred --CCCeeeecceeeecCCceEEEEEeeccCCchhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEE
Q 011763 188 --HPNIIKLEGLITSRLSCSIYLVFEYMEHDITGLLSC--PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLL 263 (478)
Q Consensus 188 --h~nIv~l~~~~~~~~~~~~~lv~e~~~~~ll~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NIL 263 (478)
--|+++|+..|.. ..++|||+|.+.-+|...+.. .+..|....++.|+.||+.||..|..+||+|.||||.|||
T Consensus 491 Edk~Hclrl~r~F~h--knHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiL 568 (752)
T KOG0670|consen 491 EDKFHCLRLFRHFKH--KNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNIL 568 (752)
T ss_pred hhhhHHHHHHHHhhh--cceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceE
Confidence 3488999888877 788999999998888777654 3445888999999999999999999999999999999999
Q ss_pred EecC-CcEEEeecccccccCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 011763 264 VNNE-GVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQL 342 (478)
Q Consensus 264 l~~~-~~vkl~DFG~a~~~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~ 342 (478)
|++. ..+||||||.|...... ..+.+..+..|+|||+++| .+|+...|+||+||+||||.||+-+|.|.++.+.+
T Consensus 569 VNE~k~iLKLCDfGSA~~~~en---eitPYLVSRFYRaPEIiLG-~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~ML 644 (752)
T KOG0670|consen 569 VNESKNILKLCDFGSASFASEN---EITPYLVSRFYRAPEIILG-LPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQML 644 (752)
T ss_pred eccCcceeeeccCccccccccc---cccHHHHHHhccCcceeec-CcccCCccceeeceeeEEeeccceecCCCCcHHHH
Confidence 9987 56899999999877653 3456677889999999998 88999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCchhhccCCCCCccccCC----------------------CCC---CCccchhc--c----cCCchhHHH
Q 011763 343 HKIFKLCGSPPDDYWKKSKLPHATLFKP----------------------QQP---YDSSLRET--F----KDLPTTAVN 391 (478)
Q Consensus 343 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~----------------------~~~---~~~~l~~~--~----~~~~~~l~~ 391 (478)
.-++++-|..|.....+..+.+..+..+ ..| +.+.|... + ..+-..+.+
T Consensus 645 rl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rd 724 (752)
T KOG0670|consen 645 RLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRD 724 (752)
T ss_pred HHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHH
Confidence 9999999999988877655433222111 011 00111110 0 112235899
Q ss_pred HHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 392 LIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 392 Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
||..||..||++|+|+.|+|.||||+.
T Consensus 725 LLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 725 LLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred HHHHHhccChhhcCCHHHHhcCCcccC
Confidence 999999999999999999999999975
No 241
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=7.4e-41 Score=325.83 Aligned_cols=254 Identities=24% Similarity=0.374 Sum_probs=199.4
Q ss_pred eeeecCceEEEEEEECCCCcEEEEEEeecCCCChHH-HHHHHHHH---HHHHhcCCCCeeeecceeeecCCceEEEEEee
Q 011763 137 KIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPES-VRFMAREI---LILRRLDHPNIIKLEGLITSRLSCSIYLVFEY 212 (478)
Q Consensus 137 ~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~-~~~~~~E~---~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~ 212 (478)
.||+|+||.||++.+..+++.||+|++......... ......|. .+++...||||+++++++.. ....|+||||
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~v~e~ 78 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT--PDKLSFILDL 78 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeec--CCEEEEEEec
Confidence 379999999999999999999999999765433211 12223343 34455689999999998887 5789999999
Q ss_pred ccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCcccc
Q 011763 213 MEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSR 292 (478)
Q Consensus 213 ~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~ 292 (478)
+.++.+..+......+++..++.++.||+.||.|||+.+|+|+||||+||+++.++.++|+|||++....... ....
T Consensus 79 ~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~---~~~~ 155 (278)
T cd05606 79 MNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PHAS 155 (278)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC---CcCc
Confidence 9987776666666689999999999999999999999999999999999999999999999999987543221 2334
Q ss_pred ccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCC
Q 011763 293 VVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQ 372 (478)
Q Consensus 293 ~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 372 (478)
.++..|+|||++.+...++.++|||||||++|+|++|+.||.......... +.......+.
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~------------------ 216 (278)
T cd05606 156 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTMAV------------------ 216 (278)
T ss_pred CCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHH-HHHHhhccCC------------------
Confidence 678999999998764568899999999999999999999998763221111 1110000000
Q ss_pred CCCccchhcccCCchhHHHHHHHhcCCCCCCcc-----CHHHHHhCcccCCCCC
Q 011763 373 PYDSSLRETFKDLPTTAVNLIETLLSVEPYKRA-----TASAALASEYFSTKPY 421 (478)
Q Consensus 373 ~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~-----ta~e~L~hp~f~~~~~ 421 (478)
.....++.++.+||.+||..||.+|+ ++.++++||||+...+
T Consensus 217 -------~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~ 263 (278)
T cd05606 217 -------ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDW 263 (278)
T ss_pred -------CCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCCc
Confidence 01124678999999999999999999 9999999999987654
No 242
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=7.1e-41 Score=325.51 Aligned_cols=257 Identities=28% Similarity=0.470 Sum_probs=212.0
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
.|+.++.||.|+||.||+|.+..++..||+|++..... ......+.+|+.+++.+.|+||+++++++.+ ....|+||
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 81 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLK--GTKLWIIM 81 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE--CCEEEEEE
Confidence 58899999999999999999998999999999875532 3445678889999999999999999999987 67899999
Q ss_pred eeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCcc
Q 011763 211 EYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLT 290 (478)
Q Consensus 211 e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~ 290 (478)
||++++.+..+... .++++..+..++.|++.||+|||+++++|+||+|+||+++.++.++|+|||++....... ....
T Consensus 82 e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-~~~~ 159 (277)
T cd06640 82 EYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IKRN 159 (277)
T ss_pred ecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc-cccc
Confidence 99998766555443 468999999999999999999999999999999999999999999999999997654322 1223
Q ss_pred ccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCC
Q 011763 291 SRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKP 370 (478)
Q Consensus 291 ~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 370 (478)
...++..|+|||++.+ ..++.++|+|||||++|+|++|.+||...........+.. +.++
T Consensus 160 ~~~~~~~y~apE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~--~~~~----------------- 219 (277)
T cd06640 160 TFVGTPFWMAPEVIQQ-SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPK--NNPP----------------- 219 (277)
T ss_pred cccCcccccCHhHhcc-CCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhc--CCCC-----------------
Confidence 3456888999999876 5688999999999999999999999987665544333211 0000
Q ss_pred CCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCC
Q 011763 371 QQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPY 421 (478)
Q Consensus 371 ~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~ 421 (478)
.....++..+.+||.+||..||++||++.++|.||||.....
T Consensus 220 ---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 261 (277)
T cd06640 220 ---------TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAK 261 (277)
T ss_pred ---------CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcch
Confidence 111246788999999999999999999999999999976443
No 243
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=6.6e-41 Score=322.32 Aligned_cols=253 Identities=30% Similarity=0.439 Sum_probs=203.3
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCCC-hHHHHHHHHHHHHHH-hcCCCCeeeecceeeecCCceEEEEEeec
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFE-PESVRFMAREILILR-RLDHPNIIKLEGLITSRLSCSIYLVFEYM 213 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~-~~~~~~~~~E~~~l~-~l~h~nIv~l~~~~~~~~~~~~~lv~e~~ 213 (478)
+.||.|+||.||+|.+..+++.||+|++...... ......+..|..++. .++|+||+++++++.. ...+|+||||+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~~~~lv~e~~ 79 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS--KDYLYLVMEYL 79 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc--CCeEEEEEecc
Confidence 5789999999999999999999999998754322 222233445555544 4589999999999976 67899999999
Q ss_pred cCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccc
Q 011763 214 EHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRV 293 (478)
Q Consensus 214 ~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 293 (478)
+++.+..+......+++..+..++.||+.||.|||+.+++|+||+|+||+++.++.++|+|||++..... .....
T Consensus 80 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----~~~~~ 154 (260)
T cd05611 80 NGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----NKKFV 154 (260)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc-----cccCC
Confidence 9877776666666799999999999999999999999999999999999999999999999999875432 12345
Q ss_pred cCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCC
Q 011763 294 VTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQP 373 (478)
Q Consensus 294 ~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 373 (478)
+++.|+|||.+.+ ..++.++||||||+++|+|++|.+||...+..+....+.......+.
T Consensus 155 ~~~~y~~pe~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------------- 214 (260)
T cd05611 155 GTPDYLAPETILG-VGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPE------------------- 214 (260)
T ss_pred CCcCccChhhhcC-CCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCC-------------------
Confidence 6788999999886 45889999999999999999999999887776655554332111000
Q ss_pred CCccchhcccCCchhHHHHHHHhcCCCCCCccC---HHHHHhCcccCCCCC
Q 011763 374 YDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT---ASAALASEYFSTKPY 421 (478)
Q Consensus 374 ~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t---a~e~L~hp~f~~~~~ 421 (478)
.....++..+.++|.+||+.||++||+ +.|+|.||||++..|
T Consensus 215 ------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~~ 259 (260)
T cd05611 215 ------EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSINW 259 (260)
T ss_pred ------cccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCCC
Confidence 011257889999999999999999995 579999999987443
No 244
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=6.9e-41 Score=321.10 Aligned_cols=254 Identities=26% Similarity=0.469 Sum_probs=208.8
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
+|++.+.||.|+||.||++.+..++..||+|.+..........+.+.+|+.+++.++|+||+++++.+.. ....|+|+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~--~~~~~lv~ 78 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQE--NGRLFIVM 78 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheecc--CCeEEEEE
Confidence 4899999999999999999999999999999997765444455677889999999999999999998877 67899999
Q ss_pred eeccCCchhhcc-C-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCc-EEEeecccccccCCCCCC
Q 011763 211 EYMEHDITGLLS-C-PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGV-LKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 211 e~~~~~ll~~~~-~-~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~-vkl~DFG~a~~~~~~~~~ 287 (478)
||+.+..+..+. . ....+++..+..++.||+.||.|||+++|+|+||||+||++++++. +||+|||.+....... .
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-~ 157 (257)
T cd08225 79 EYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM-E 157 (257)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc-c
Confidence 999875554443 2 2235799999999999999999999999999999999999998864 6999999987654322 1
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccc
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATL 367 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 367 (478)
......+++.|+|||++.+ ..++.++|+|||||++|+|++|..||...+..+....+.... .
T Consensus 158 ~~~~~~~~~~~~ape~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~--------------- 219 (257)
T cd08225 158 LAYTCVGTPYYLSPEICQN-RPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGY--F--------------- 219 (257)
T ss_pred cccccCCCccccCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccc--C---------------
Confidence 2223457889999998875 568899999999999999999999998776655554433210 0
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
....+.++.++.++|.+||..+|++|||+.++|.||||
T Consensus 220 -----------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 220 -----------APISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred -----------CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 00113567889999999999999999999999999997
No 245
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.2e-40 Score=320.47 Aligned_cols=256 Identities=31% Similarity=0.474 Sum_probs=212.9
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
++|++.+.||.|++|.||++++..+++.|++|++...... .....+.+|+.++.+++|+||+++++++.. ....++|
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv 77 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYK--EGEISIV 77 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEcc--CCeEEEE
Confidence 3699999999999999999999999999999999765432 455678899999999999999999999877 5789999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
|||++++.+..+......+++..+..++.||+.||.|||+ ++++|+||+|+||+++.++.++|+|||++........ .
T Consensus 78 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~-~ 156 (264)
T cd06623 78 LEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD-Q 156 (264)
T ss_pred EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCC-c
Confidence 9999977666665555689999999999999999999999 9999999999999999999999999999976643322 1
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRT---EVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~---~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
.....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||.... ..+....+.. ....
T Consensus 157 ~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~---~~~~----------- 221 (264)
T cd06623 157 CNTFVGTVTYMSPERIQG-ESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD---GPPP----------- 221 (264)
T ss_pred ccceeecccccCHhhhCC-CCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhc---CCCC-----------
Confidence 223456889999998876 578899999999999999999999998774 2333333221 1000
Q ss_pred cccCCCCCCCccchhcccC-CchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 366 TLFKPQQPYDSSLRETFKD-LPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~-~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
..... ++..+.++|.+||..+|++|||+.++|+||||+.
T Consensus 222 --------------~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~ 261 (264)
T cd06623 222 --------------SLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKK 261 (264)
T ss_pred --------------CCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHh
Confidence 00123 7889999999999999999999999999999975
No 246
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.7e-40 Score=321.04 Aligned_cols=257 Identities=29% Similarity=0.405 Sum_probs=202.3
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.+.+.....||+|+||.||++.+..++..||+|.+.... ....+.+.+|+.+++.++|+||+++++++.. +...++
T Consensus 7 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~l 82 (268)
T cd06624 7 YDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD--SRYVQPLHEEIALHSYLKHRNIVQYLGSDSE--NGFFKI 82 (268)
T ss_pred cccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCCeeeeeeeecc--CCEEEE
Confidence 456667789999999999999999899999999987543 3445678899999999999999999999877 678999
Q ss_pred EEeeccCCchhhccC-CCCCC--CHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEec-CCcEEEeecccccccCCC
Q 011763 209 VFEYMEHDITGLLSC-PDIKF--SEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNN-EGVLKLADFGLANFSNTG 284 (478)
Q Consensus 209 v~e~~~~~ll~~~~~-~~~~l--~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~-~~~vkl~DFG~a~~~~~~ 284 (478)
|+||+.++.+..+.. ....+ ++..+..++.||+.||.|||++||+|+||||+||+++. ++.++|+|||++......
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~ 162 (268)
T cd06624 83 FMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI 162 (268)
T ss_pred EEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccC
Confidence 999999765554433 33445 88899999999999999999999999999999999976 679999999998755332
Q ss_pred CCCCccccccCCcccCcccccCC-CCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCC
Q 011763 285 HRQPLTSRVVTLWYRPPELLLGA-TDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP 363 (478)
Q Consensus 285 ~~~~~~~~~~t~~y~APE~l~~~-~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 363 (478)
. .......+++.|+|||++.+. ..++.++||||||+++|+|++|++||...................
T Consensus 163 ~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----------- 230 (268)
T cd06624 163 N-PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIH----------- 230 (268)
T ss_pred C-CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccC-----------
Confidence 2 122234568899999998652 347889999999999999999999997543322111100000000
Q ss_pred CccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 364 HATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 364 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
......+++++.+||.+||..+|.+|||+.+++.||||
T Consensus 231 ---------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 231 ---------------PEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred ---------------CCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 00113567889999999999999999999999999997
No 247
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=4.7e-41 Score=341.19 Aligned_cols=254 Identities=20% Similarity=0.292 Sum_probs=199.0
Q ss_pred ccceeeeeeeeecCceEEEEEEE-----CCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecC
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARD-----LDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSRL 202 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~-----~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 202 (478)
.++|++.+.||+|+||+||+|++ ..++..||||+++... .....+.+.+|+.+|..+ +||||+++++++..
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~-- 110 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHINIVNLLGACTV-- 110 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc-CcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc--
Confidence 45899999999999999999974 3456789999987543 233456778899999999 89999999999977
Q ss_pred CceEEEEEeeccCCchhhccC-C---------------------------------------------------------
Q 011763 203 SCSIYLVFEYMEHDITGLLSC-P--------------------------------------------------------- 224 (478)
Q Consensus 203 ~~~~~lv~e~~~~~ll~~~~~-~--------------------------------------------------------- 224 (478)
....|+||||++++.+..+.. .
T Consensus 111 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (375)
T cd05104 111 GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVR 190 (375)
T ss_pred CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccc
Confidence 667899999998754433221 1
Q ss_pred -----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 225 -----------------DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 225 -----------------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 191 SGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred cceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 124788899999999999999999999999999999999999999999999999765432211
Q ss_pred C-ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 288 P-LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 288 ~-~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
. .....++..|+|||++.+ ..++.++|||||||++|+|++ |..||........+.+++.....+
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~-~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~------------- 336 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRM------------- 336 (375)
T ss_pred cccCCCCCCcceeChhHhcC-CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccC-------------
Confidence 1 112234567999999876 678999999999999999998 899998766554444333211000
Q ss_pred cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 366 TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
......+.++.+||.+||+.||++|||+.++++.
T Consensus 337 --------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 337 --------------LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred --------------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 0012357789999999999999999999999864
No 248
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=2.2e-40 Score=328.21 Aligned_cols=256 Identities=29% Similarity=0.471 Sum_probs=213.3
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
+.|...+.||+|+||+||+|++..+++.|++|++..... .......+.+|+.+++.++||||+++++++.+ ....|+
T Consensus 21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~l 98 (313)
T cd06633 21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK--EHTAWL 98 (313)
T ss_pred HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe--CCEEEE
Confidence 347788899999999999999999999999999975433 33445667889999999999999999999987 677999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||||+.++++..+.....++++..+..++.||+.+|.|||++||+|+||+|+||+++.++.+||+|||++.....
T Consensus 99 v~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~----- 173 (313)
T cd06633 99 VMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP----- 173 (313)
T ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC-----
Confidence 999999888777766666799999999999999999999999999999999999999999999999999864322
Q ss_pred ccccccCCcccCcccccC--CCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcc
Q 011763 289 LTSRVVTLWYRPPELLLG--ATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHAT 366 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~--~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 366 (478)
.....++..|+|||++.. ...++.++|||||||++|+|++|.+||...+....+..+... ..+.
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~--~~~~------------ 239 (313)
T cd06633 174 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--DSPT------------ 239 (313)
T ss_pred CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--CCCC------------
Confidence 233467888999999742 256788999999999999999999999887766665554321 1100
Q ss_pred ccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 367 LFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 367 ~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
.....++..+.+||.+||+.+|.+||++.++|.||||...
T Consensus 240 -------------~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~ 279 (313)
T cd06633 240 -------------LQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRD 279 (313)
T ss_pred -------------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence 0012456789999999999999999999999999999863
No 249
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=4.7e-41 Score=323.10 Aligned_cols=253 Identities=30% Similarity=0.476 Sum_probs=207.1
Q ss_pred eeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeeccCC
Q 011763 138 IGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHD 216 (478)
Q Consensus 138 LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~~~ 216 (478)
||.|+||.||++++..+++.|++|++..... .....+.+.+|+.++++++||||+++++.+.. ....|+||||+.++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~ 78 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQG--KKNLYLVMEYLPGG 78 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheec--CcEEEEEEecCCCC
Confidence 6899999999999998999999999975543 23455677889999999999999999998876 67899999999986
Q ss_pred chhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC-------CCc
Q 011763 217 ITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-------QPL 289 (478)
Q Consensus 217 ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~-------~~~ 289 (478)
.+..+......+++..+..++.||+.||.|||+++++|+||+|+||++++++.++|+|||++........ ...
T Consensus 79 ~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 158 (265)
T cd05579 79 DLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKED 158 (265)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccc
Confidence 6655554444789999999999999999999999999999999999999999999999999875433211 122
Q ss_pred cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccC
Q 011763 290 TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFK 369 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 369 (478)
....++..|+|||++.. ..++.++||||||+++|+|++|..||......+....+......++.
T Consensus 159 ~~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------- 222 (265)
T cd05579 159 KRIVGTPDYIAPEVILG-QGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPE--------------- 222 (265)
T ss_pred cCcccCccccCHHHhcC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCc---------------
Confidence 33456788999999876 55888999999999999999999999888776666555331100000
Q ss_pred CCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCH---HHHHhCcccCCCC
Q 011763 370 PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATA---SAALASEYFSTKP 420 (478)
Q Consensus 370 ~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta---~e~L~hp~f~~~~ 420 (478)
...++..+.+||.+||+.+|.+|||+ .++|+||||++..
T Consensus 223 ------------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~ 264 (265)
T cd05579 223 ------------DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGID 264 (265)
T ss_pred ------------cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCC
Confidence 01257889999999999999999999 9999999998654
No 250
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.2e-40 Score=360.46 Aligned_cols=149 Identities=29% Similarity=0.445 Sum_probs=132.4
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
.++|.++++||+|+||+||+|++..+++.||||+++.... .......+.+|+.++..++|+||+++++++.. ..++|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~--~~~~~ 80 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQS--ANNVY 80 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE--CCEEE
Confidence 5689999999999999999999999999999999975433 34445678889999999999999999988876 67899
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeeccccc
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLAN 279 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~ 279 (478)
|||||+.++.+..+......+++..++.|+.||+.||.|||+++||||||||+||||+.++.+||+|||+++
T Consensus 81 lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 81 LVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999886666555555578999999999999999999999999999999999999999999999999985
No 251
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.2e-40 Score=321.40 Aligned_cols=250 Identities=20% Similarity=0.299 Sum_probs=203.2
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
..+|.+.+.||.|+||.||+|.+..+++.||+|++..+. .....+.+|+.+++.++|+||+++++++.. ...+++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l 79 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--EPPFYI 79 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc---hHHHHHHHHHHHHHhCCCCChhheEEEEcC--CCCcEE
Confidence 457999999999999999999999899999999987442 334567889999999999999999998876 567899
Q ss_pred EEeeccCCchhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 209 VFEYMEHDITGLLSC--PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 209 v~e~~~~~ll~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
||||++++.+..+.. ....+++..++.++.||+.||.|||+++++|+||||+|||+++++.+||+|||++........
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~ 159 (263)
T cd05052 80 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 159 (263)
T ss_pred EEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCcccccccccee
Confidence 999998765544432 234589999999999999999999999999999999999999999999999999976543322
Q ss_pred CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 287 QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 287 ~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
........+..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+....+..... +
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~--~------------ 224 (263)
T cd05052 160 TAHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYR--M------------ 224 (263)
T ss_pred eccCCCCCccccCCHHHhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC--C------------
Confidence 21122233567999998876 678899999999999999998 9999988776555444432110 0
Q ss_pred cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 366 TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
.....++.++.+||.+||..||++|||+.++++
T Consensus 225 --------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 225 --------------ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred --------------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 011357889999999999999999999999975
No 252
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-41 Score=338.44 Aligned_cols=254 Identities=22% Similarity=0.349 Sum_probs=206.2
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.+++.+...||+|.||+||+|++..+ ||||+++.+..+++..+.|.+|+.+|++-+|.||+-+.|++..+ . +.|
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p--~-~AI 464 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP--P-LAI 464 (678)
T ss_pred HHHhhccceeccccccceeecccccc---eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC--c-eee
Confidence 45788999999999999999998653 99999999988899999999999999999999999999999873 3 489
Q ss_pred EEeeccCCchh-hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC-CC
Q 011763 209 VFEYMEHDITG-LLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG-HR 286 (478)
Q Consensus 209 v~e~~~~~ll~-~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~-~~ 286 (478)
|..+|+|..|. .+......|.....+.|++||++|+.|||.++|||||||..||+|.++++|||+|||++..-... ..
T Consensus 465 iTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~ 544 (678)
T KOG0193|consen 465 ITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGE 544 (678)
T ss_pred eehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeeccc
Confidence 99999996554 44455667999999999999999999999999999999999999999999999999999643211 11
Q ss_pred CCccccccCCcccCcccccC--CCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 287 QPLTSRVVTLWYRPPELLLG--ATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 287 ~~~~~~~~t~~y~APE~l~~--~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
.......+...|||||++.. ..+|++.+|||||||++|||++|..||...+....+.++-+....|
T Consensus 545 ~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~p------------ 612 (678)
T KOG0193|consen 545 QQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMP------------ 612 (678)
T ss_pred cccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCc------------
Confidence 22233445677999999863 3579999999999999999999999999433333332222211111
Q ss_pred ccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 365 ATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 365 ~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
.+.....+.+.++++|+..|+.+++++||+..++|.
T Consensus 613 ------------d~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 613 ------------DLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred ------------cchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 112223467889999999999999999999999986
No 253
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=5.2e-41 Score=334.80 Aligned_cols=278 Identities=25% Similarity=0.372 Sum_probs=203.8
Q ss_pred eeeeec--CceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeec
Q 011763 136 EKIGQG--TYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYM 213 (478)
Q Consensus 136 ~~LG~G--~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~ 213 (478)
..||.| +|++||++++..+++.||+|++..........+.+.+|+.+++.++||||++++++|.. +...|+||||+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~--~~~~~~v~e~~ 81 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTT--GSWLWVISPFM 81 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEec--CCceEEEEecc
Confidence 345666 99999999999999999999998766555666788899999999999999999999987 67799999999
Q ss_pred cCCchhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC----
Q 011763 214 EHDITGLLSCP--DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ---- 287 (478)
Q Consensus 214 ~~~ll~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~---- 287 (478)
.++.+..+... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+||+.+.........
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (328)
T cd08226 82 AYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVV 161 (328)
T ss_pred cCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccc
Confidence 97655544332 235899999999999999999999999999999999999999999999999865322111000
Q ss_pred --CccccccCCcccCcccccCC-CCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 288 --PLTSRVVTLWYRPPELLLGA-TDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 288 --~~~~~~~t~~y~APE~l~~~-~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
......++..|+|||++.+. ..++.++|||||||++|+|++|++||........+..+... ++...|.....+.
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 238 (328)
T cd08226 162 YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKG---PPYSPLDITTFPC 238 (328)
T ss_pred ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcC---CCCCCccccccch
Confidence 00111235679999998753 34789999999999999999999999887665554444332 2211111110000
Q ss_pred cc--c---------------cCCC---CCCCccch-hcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 365 AT--L---------------FKPQ---QPYDSSLR-ETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 365 ~~--~---------------~~~~---~~~~~~l~-~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
.. . .... ......+. .....+++.+++||++||..||.+|||+.++|+||||..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~ 313 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQ 313 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHH
Confidence 00 0 0000 00000000 111346778999999999999999999999999999975
No 254
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.1e-40 Score=322.78 Aligned_cols=249 Identities=26% Similarity=0.370 Sum_probs=196.9
Q ss_pred ccceeeeeee--eecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCce
Q 011763 129 ADAFEKLEKI--GQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSCS 205 (478)
Q Consensus 129 ~~~y~~~~~L--G~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~ 205 (478)
.++|++.+.+ |.|+||.||++.+..++..+|+|++....... .|+.....+ +||||+++++.|.. ...
T Consensus 13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------~e~~~~~~~~~h~~iv~~~~~~~~--~~~ 83 (267)
T PHA03390 13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------IEPMVHQLMKDNPNFIKLYYSVTT--LKG 83 (267)
T ss_pred HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------hhHHHHHHhhcCCCEEEEEEEEec--CCe
Confidence 3467777776 99999999999999999999999987543221 123333323 79999999999987 568
Q ss_pred EEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCC-cEEEeecccccccCCC
Q 011763 206 IYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG-VLKLADFGLANFSNTG 284 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~-~vkl~DFG~a~~~~~~ 284 (478)
.|+||||++++.+..+......+++..++.++.||+.||.|||+.|++|+||||+||+++.++ .++|+|||++......
T Consensus 84 ~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~ 163 (267)
T PHA03390 84 HVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP 163 (267)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC
Confidence 999999998766655555555899999999999999999999999999999999999999998 9999999998755422
Q ss_pred CCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHcCCCCchhhccCCCC
Q 011763 285 HRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQ-LHKIFKLCGSPPDDYWKKSKLP 363 (478)
Q Consensus 285 ~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~-~~~i~~~~g~~~~~~~~~~~~~ 363 (478)
....++..|+|||++.+ ..++.++|||||||++|+|++|..||......+. ...+.... ..+
T Consensus 164 -----~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~---------- 226 (267)
T PHA03390 164 -----SCYDGTLDYFSPEKIKG-HNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKK---------- 226 (267)
T ss_pred -----ccCCCCCcccChhhhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-ccc----------
Confidence 22356889999999876 6689999999999999999999999986544332 11111111 000
Q ss_pred CccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccC-HHHHHhCcccCC
Q 011763 364 HATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT-ASAALASEYFST 418 (478)
Q Consensus 364 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t-a~e~L~hp~f~~ 418 (478)
....+.+++.+.+||.+||+.||.+|++ .+++|+||||++
T Consensus 227 ---------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 227 ---------------LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred ---------------CCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 0112357899999999999999999996 599999999964
No 255
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.5e-40 Score=318.13 Aligned_cols=254 Identities=30% Similarity=0.471 Sum_probs=213.1
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
+|++.+.||.|+||.||++.+..++..||+|++............+.+|+++++.++|+|++++++.+.. ....++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~--~~~~~lv~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEE--KGKLCIVM 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEec--CCEEEEEE
Confidence 5899999999999999999999899999999998766555667778899999999999999999999877 57899999
Q ss_pred eeccCCchhhcc-CC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 211 EYMEHDITGLLS-CP---DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 211 e~~~~~ll~~~~-~~---~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
||++++.+.... .. ...+++..+..++.||+.||.|||++|++|+||+|+||++++++.++|+|||++.......
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 157 (258)
T cd08215 79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV- 157 (258)
T ss_pred EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc-
Confidence 999985544433 32 3679999999999999999999999999999999999999999999999999997654432
Q ss_pred CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcc
Q 011763 287 QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHAT 366 (478)
Q Consensus 287 ~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 366 (478)
.......+++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+..+....+......
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------------- 221 (258)
T cd08215 158 DLAKTVVGTPYYLSPELCQN-KPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYP--------------- 221 (258)
T ss_pred ceecceeeeecccChhHhcc-CCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCC---------------
Confidence 12233467888999998876 66889999999999999999999999877755555444321100
Q ss_pred ccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 367 LFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 367 ~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
.....++..+.++|.+||..||++|||+.++|+||||
T Consensus 222 -------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 222 -------------PIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred -------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 0012567889999999999999999999999999997
No 256
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=2.2e-40 Score=328.69 Aligned_cols=255 Identities=30% Similarity=0.480 Sum_probs=213.1
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
..|+..+.||+|+||.||++++..++..||+|++..... ..+....+.+|+.+++.++|+|++++++++.. ....|+
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~l 102 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR--EHTAWL 102 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEee--CCeEEE
Confidence 358999999999999999999998999999999875432 33445678889999999999999999999877 567899
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||||+.+.++..+.....++++..+..++.||+.||.|||+++|+|+||+|+||+++.++.++|+|||++......
T Consensus 103 v~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~---- 178 (317)
T cd06635 103 VMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA---- 178 (317)
T ss_pred EEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCc----
Confidence 9999998877776655667999999999999999999999999999999999999999999999999998654322
Q ss_pred ccccccCCcccCcccccC--CCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcc
Q 011763 289 LTSRVVTLWYRPPELLLG--ATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHAT 366 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~--~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 366 (478)
....+++.|+|||++.. ...++.++|||||||++|+|++|.+||...+....+..+......+.
T Consensus 179 -~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~------------- 244 (317)
T cd06635 179 -NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTL------------- 244 (317)
T ss_pred -ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCC-------------
Confidence 23456888999998742 24578899999999999999999999988766665555543211110
Q ss_pred ccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 367 LFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 367 ~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
....+++.+.+||.+||+.||.+||++.++++|+|+..
T Consensus 245 --------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 245 --------------QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred --------------CCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 01246778999999999999999999999999999965
No 257
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.9e-40 Score=318.16 Aligned_cols=250 Identities=25% Similarity=0.452 Sum_probs=205.7
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
+|++.+.||.|+||.||++.+..+++.||+|.++.... ....+.+.+|+.+++.++|+||+++++.+.. ...+|+||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 77 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS-SSAVEDSRKEAVLLAKMKHPNIVAFKESFEA--DGHLYIVM 77 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc-hHHHHHHHHHHHHHHhCCCCCcceEEEEEEE--CCEEEEEE
Confidence 48999999999999999999999999999999875442 3445677789999999999999999999977 67899999
Q ss_pred eeccCCch-hhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 211 EYMEHDIT-GLLSC-PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 211 e~~~~~ll-~~~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
||++++.+ ..+.. ....+++..+..++.||+.||.|||++||+|+||||+||++++++.++|+|||++....... ..
T Consensus 78 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-~~ 156 (255)
T cd08219 78 EYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG-AY 156 (255)
T ss_pred eeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccc-cc
Confidence 99987544 33332 34468999999999999999999999999999999999999999999999999987654322 12
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF 368 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 368 (478)
.....+++.|+|||++.+ ..++.++||||||+++|+|++|..||...+.......+......+
T Consensus 157 ~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------------- 219 (255)
T cd08219 157 ACTYVGTPYYVPPEIWEN-MPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKP---------------- 219 (255)
T ss_pred cccccCCccccCHHHHcc-CCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCC----------------
Confidence 233567889999999876 668999999999999999999999998877655554443211000
Q ss_pred CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 369 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 369 ~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
....++..+.+||.+||+.||++|||+.++|.-
T Consensus 220 ------------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 220 ------------LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ------------CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 012467789999999999999999999999864
No 258
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=4e-41 Score=327.16 Aligned_cols=255 Identities=28% Similarity=0.461 Sum_probs=208.9
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
+.|++++.||.|+||.||+|.+..++..||+|++..... ....+.+.+|+.++++++||||+++++.+.. ....|+|
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 80 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYITRYYGSYLK--GTKLWII 80 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc-hHHHHHHHHHHHHHHcCCCCccHhhhccccc--CCceEEE
Confidence 368889999999999999999988999999999875542 3445678899999999999999999999877 6679999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL 289 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 289 (478)
|||++++.+..+... ..+++..++.++.||+.||.|||+++++|+||+|+||++++++.++|+|||++....... ...
T Consensus 81 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-~~~ 158 (277)
T cd06642 81 MEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IKR 158 (277)
T ss_pred EEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcc-hhh
Confidence 999998766555543 468999999999999999999999999999999999999999999999999987554321 112
Q ss_pred cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccC
Q 011763 290 TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFK 369 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 369 (478)
....++..|+|||++.+ ..++.++|||||||++|+|++|+.||...........+... .++
T Consensus 159 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~--~~~---------------- 219 (277)
T cd06642 159 NTFVGTPFWMAPEVIKQ-SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN--SPP---------------- 219 (277)
T ss_pred hcccCcccccCHHHhCc-CCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcC--CCC----------------
Confidence 23456888999999876 56889999999999999999999999765544433222110 000
Q ss_pred CCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 370 PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 370 ~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
.....++.++.+||.+||..+|.+|||+.++|.||||..
T Consensus 220 ----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 258 (277)
T cd06642 220 ----------TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITR 258 (277)
T ss_pred ----------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHH
Confidence 001246788999999999999999999999999999975
No 259
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.2e-40 Score=326.84 Aligned_cols=258 Identities=28% Similarity=0.482 Sum_probs=210.3
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|++.+.||+|+||.||++.+..+++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.. ....|+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~--~~~~~l 93 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ--QPKKELIINEILVMRENKHPNIVNYLDSYLV--GDELWV 93 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc--chHHHHHHHHHHHHhhcCCCCeeehhheeee--CCcEEE
Confidence 458999999999999999999998889999999986543 2334667889999999999999999999987 567999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
|+||++++.+..+.... .+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++........ .
T Consensus 94 v~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~-~ 171 (293)
T cd06647 94 VMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K 171 (293)
T ss_pred EEecCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc-c
Confidence 99999987666554433 578999999999999999999999999999999999999999999999999865543221 2
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF 368 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 368 (478)
.....+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||...+..+.+..+.. .+.+.
T Consensus 172 ~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~-~~~~~--------------- 234 (293)
T cd06647 172 RSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPE--------------- 234 (293)
T ss_pred cccccCChhhcCchhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhc-CCCCC---------------
Confidence 233457888999998876 5688999999999999999999999987665444332211 00000
Q ss_pred CCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 369 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 369 ~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
......++..+.+||++||..||++||++.++|.|+||+..
T Consensus 235 ----------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~ 275 (293)
T cd06647 235 ----------LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIA 275 (293)
T ss_pred ----------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcC
Confidence 00112467789999999999999999999999999999763
No 260
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1e-40 Score=324.40 Aligned_cols=252 Identities=23% Similarity=0.330 Sum_probs=204.0
Q ss_pred ccceeeeeeeeecCceEEEEEEECC-----CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLD-----TGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS 203 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~-----~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 203 (478)
.++|.+.+.||+|+||.||+|.+.. ++..||+|++.... ..+....+.+|+++|+.++|+||+++++++.. .
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~ 80 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA-SNDARKDFEREAELLTNFQHENIVKFYGVCTE--G 80 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC-CHHHHHHHHHHHHHHHhcCCCCchheeeEEec--C
Confidence 5679999999999999999998743 46789999987543 33355778899999999999999999999987 5
Q ss_pred ceEEEEEeeccCCchhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCc
Q 011763 204 CSIYLVFEYMEHDITGLLSCP--------------DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGV 269 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~ 269 (478)
...|+||||++++.+..+... ...+++..+..++.||+.||.|||++|++|+||||+|||++.++.
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 81 DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCe
Confidence 779999999998665544322 235789999999999999999999999999999999999999999
Q ss_pred EEEeecccccccCCCCC-CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 011763 270 LKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFK 347 (478)
Q Consensus 270 vkl~DFG~a~~~~~~~~-~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~ 347 (478)
+||+|||++........ .......+++.|+|||++.+ ..++.++|||||||++|+|++ |..||...+..+....+..
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~ 239 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQ 239 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhcc-CCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence 99999999875432211 11123345778999999876 678999999999999999998 9999988777666555532
Q ss_pred HcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 348 LCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 348 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
..... ....++..+.+||.+||..||++|||+.|+++
T Consensus 240 ~~~~~----------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 240 GRLLQ----------------------------RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred CCcCC----------------------------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 11100 01256788999999999999999999999985
No 261
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.4e-40 Score=317.84 Aligned_cols=249 Identities=21% Similarity=0.338 Sum_probs=201.1
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|++.+.||+|+||.||++... .+..+|+|.+...... ...+.+|+.+|+.++||||+++++++.. ....|+
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~i 76 (256)
T cd05114 3 PSELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMS---EEDFIEEAKVMMKLSHPKLVQLYGVCTQ--QKPLYI 76 (256)
T ss_pred HHHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCcc---HHHHHHHHHHHHHCCCCCceeEEEEEcc--CCCEEE
Confidence 457999999999999999999875 4567999988654332 3457789999999999999999999877 567999
Q ss_pred EEeeccCCchhhc-cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 209 VFEYMEHDITGLL-SCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 209 v~e~~~~~ll~~~-~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
||||++++.+..+ ......+++..+..++.||+.||.|||++||+|+||||+||++++++.+||+|||++.........
T Consensus 77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05114 77 VTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT 156 (256)
T ss_pred EEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCcee
Confidence 9999987655444 334456899999999999999999999999999999999999999999999999998755332222
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcc
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHAT 366 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 366 (478)
......++..|+|||++.+ ..++.++|||||||++|+|++ |++||...+..+.+..+.......
T Consensus 157 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~-------------- 221 (256)
T cd05114 157 SSSGAKFPVKWSPPEVFNF-SKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLY-------------- 221 (256)
T ss_pred ccCCCCCchhhCChhhccc-CccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCC--------------
Confidence 1122234567999999876 678999999999999999999 999999888777766654321000
Q ss_pred ccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 367 LFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 367 ~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
.....+..+.+||.+||..||++||++.++++
T Consensus 222 --------------~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 222 --------------RPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred --------------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 00134678999999999999999999999985
No 262
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=3.7e-40 Score=318.09 Aligned_cols=258 Identities=27% Similarity=0.428 Sum_probs=209.8
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCC---CChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDN---FEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSI 206 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 206 (478)
.+|++.+.||+|+||.||++++..+++.||+|++.... ........+.+|+.++++++|+||+++++++.+.....+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 37999999999999999999999999999999986432 123455678889999999999999999998876556678
Q ss_pred EEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC-
Q 011763 207 YLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH- 285 (478)
Q Consensus 207 ~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~- 285 (478)
+++|||++++.+.........+++..+..++.||+.||.|||+++|+|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 161 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM 161 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccc
Confidence 9999999986665554444568999999999999999999999999999999999999999999999999997543211
Q ss_pred -CCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 286 -RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 286 -~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
........++..|+|||++.+ ..++.++|||||||++|+|++|++||......+.+.++.. .+...
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~--------- 228 (264)
T cd06653 162 SGTGIKSVTGTPYWMSPEVISG-EGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIAT---QPTKP--------- 228 (264)
T ss_pred cCccccccCCcccccCHhhhcC-CCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHc---CCCCC---------
Confidence 111223457889999999876 5678999999999999999999999987765555444321 11100
Q ss_pred ccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 365 ATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 365 ~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
.....+++.+.++|.+||. +|.+|||+.++|.|||.
T Consensus 229 ---------------~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 229 ---------------MLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred ---------------CCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 0113578889999999999 57999999999999984
No 263
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-42 Score=320.94 Aligned_cols=284 Identities=32% Similarity=0.554 Sum_probs=233.6
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecC----Cc
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRL----SC 204 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----~~ 204 (478)
..+|.-+..+|.|+- .|..+.|.-.++.||+|++..........+...+|..++..+.|+||++++.+|.... ..
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 447999999999999 8888999999999999998776555666777889999999999999999999996532 22
Q ss_pred eEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 205 SIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
..|+|||+|..++-.... ..+.-..+..++.|++.|+.|||+.||+||||||+||++..+..+||.|||+|+.....
T Consensus 95 e~y~v~e~m~~nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~ 171 (369)
T KOG0665|consen 95 EVYLVMELMDANLCQVIL---MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD 171 (369)
T ss_pred hHHHHHHhhhhHHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcc
Confidence 479999999988776665 35678899999999999999999999999999999999999999999999999765543
Q ss_pred CCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 285 HRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 285 ~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
...+..+.|..|+|||++.+ ..|.+.+||||+||++.||++|+-+|.+.+..++..++.+.+|.|.+.+.++..-..
T Consensus 172 --~~mtpyVvtRyyrapevil~-~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~ 248 (369)
T KOG0665|consen 172 --FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTV 248 (369)
T ss_pred --cccCchhheeeccCchheec-cCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHH
Confidence 35677888999999999998 459999999999999999999999999999999999999999999999877643222
Q ss_pred ccccCCCCCCC-ccchhccc------------CCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 365 ATLFKPQQPYD-SSLRETFK------------DLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 365 ~~~~~~~~~~~-~~l~~~~~------------~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
+....+...+. ....+.|+ .-...+.+|+.+||..||++|.++.++|.||||+-|
T Consensus 249 r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~vw 316 (369)
T KOG0665|consen 249 RNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKVW 316 (369)
T ss_pred HHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeeee
Confidence 22211111110 11111111 123458999999999999999999999999999843
No 264
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-40 Score=333.51 Aligned_cols=262 Identities=26% Similarity=0.361 Sum_probs=196.6
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
+++|...+.||+|+||.||+|.... +..||||++....... ...|.+|+.+|.+++|||||+|+|||.+... ..+|
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~-~~~L 149 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYCLEGGE-HRLL 149 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEEecCCc-eEEE
Confidence 6799999999999999999998644 5899999887554322 4458999999999999999999999988322 5899
Q ss_pred EEeeccCCchhhccC-CCC-CCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCCCcEEEecCCcEEEeecccccccCC
Q 011763 209 VFEYMEHDITGLLSC-PDI-KFSEAQIKCYMNQLLHGLEHCHSRG---VLHRDIKGSNLLVNNEGVLKLADFGLANFSNT 283 (478)
Q Consensus 209 v~e~~~~~ll~~~~~-~~~-~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~vkl~DFG~a~~~~~ 283 (478)
|||||.++.|..++. ... +++|....+|+.+++.||+|||+.. |||||||++|||||++.+.||+|||+|+....
T Consensus 150 VYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 150 VYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPE 229 (361)
T ss_pred EEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCc
Confidence 999999866655444 333 8999999999999999999999853 99999999999999999999999999976654
Q ss_pred CCCCCcccc-ccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHcCCCCchhhcc
Q 011763 284 GHRQPLTSR-VVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRT---EVEQLHKIFKLCGSPPDDYWKK 359 (478)
Q Consensus 284 ~~~~~~~~~-~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~---~~~~~~~i~~~~g~~~~~~~~~ 359 (478)
. ....... .||.+|+|||++.. ...+.++||||||++|+||++|+.+..... ......-....+ ..
T Consensus 230 ~-~~~~~~~~~gt~gY~~PEy~~~-g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~--------~~ 299 (361)
T KOG1187|consen 230 G-DTSVSTTVMGTFGYLAPEYAST-GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL--------EE 299 (361)
T ss_pred c-ccceeeecCCCCccCChhhhcc-CCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH--------HC
Confidence 1 1222222 78999999999875 678999999999999999999998876432 111111111111 00
Q ss_pred CCCCCccccCCCCCCCccch-hccc--CCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 360 SKLPHATLFKPQQPYDSSLR-ETFK--DLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~l~-~~~~--~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
.+ .....|+.+. ..+. ..-..+..+..+|++.+|..||++.|+++
T Consensus 300 ~~--------~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 300 GK--------LREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred cc--------hhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 00 0011222221 1111 11223678889999999999999999753
No 265
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=4.5e-40 Score=314.50 Aligned_cols=254 Identities=31% Similarity=0.543 Sum_probs=214.2
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
+|++.+.||+|++|.||++.+..+++.|++|.+............+.+|++++.+++|+|++++++++.. ....+++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIET--SDSLYIIL 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEe--CCEEEEEE
Confidence 4889999999999999999999899999999998776555667788899999999999999999999877 57899999
Q ss_pred eeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCcc
Q 011763 211 EYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLT 290 (478)
Q Consensus 211 e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~ 290 (478)
||+++..+..+......+++..+..++.|++.+|.|||++||+|+||+|+||+++.++.++|+|||++......... ..
T Consensus 79 e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-~~ 157 (254)
T cd06627 79 EYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD-DA 157 (254)
T ss_pred ecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc-cc
Confidence 99998766666555568999999999999999999999999999999999999999999999999999766543321 23
Q ss_pred ccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCC
Q 011763 291 SRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKP 370 (478)
Q Consensus 291 ~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 370 (478)
...++..|+|||.+.+ ..++.++|||+||+++|+|++|..||...+......++... ..+
T Consensus 158 ~~~~~~~y~~pe~~~~-~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~----------------- 217 (254)
T cd06627 158 SVVGTPYWMAPEVIEM-SGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD--DHP----------------- 217 (254)
T ss_pred ccccchhhcCHhhhcC-CCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc--CCC-----------------
Confidence 3456889999998876 45889999999999999999999999876655444443210 000
Q ss_pred CCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 371 QQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 371 ~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
.....++..+.++|.+||..+|++|||+.++|.||||
T Consensus 218 ---------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 218 ---------PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred ---------CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 0012567889999999999999999999999999998
No 266
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=3.1e-40 Score=321.02 Aligned_cols=255 Identities=30% Similarity=0.477 Sum_probs=210.5
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
+-|++++.||.|+||.||++.+..++..||||++..... ......+.+|+.++.+++||||+++++++.. +...|+|
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 80 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLK--DTKLWII 80 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEe--CCeEEEE
Confidence 358899999999999999999988999999999865432 3445678889999999999999999999987 6789999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL 289 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 289 (478)
|||++++.+..+... ..+++..+..++.||+.+|.|||++|++|+||+|+||+++.++.++|+|||++....... ...
T Consensus 81 ~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~-~~~ 158 (277)
T cd06641 81 MEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKR 158 (277)
T ss_pred EEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccch-hhh
Confidence 999998766655443 368999999999999999999999999999999999999999999999999987554321 112
Q ss_pred cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccC
Q 011763 290 TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFK 369 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 369 (478)
....++..|+|||.+.+ ..++.++|||||||++|+|++|..||...........+... .++
T Consensus 159 ~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~---------------- 219 (277)
T cd06641 159 NTFVGTPFWMAPEVIKQ-SAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN--NPP---------------- 219 (277)
T ss_pred ccccCCccccChhhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcC--CCC----------------
Confidence 33456888999998875 56788999999999999999999999876655444443211 000
Q ss_pred CCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 370 PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 370 ~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
.....++.++.++|.+||..||.+||++.++|+||||.+
T Consensus 220 ----------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~ 258 (277)
T cd06641 220 ----------TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVR 258 (277)
T ss_pred ----------CCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhh
Confidence 001246788999999999999999999999999999986
No 267
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=3.6e-40 Score=318.32 Aligned_cols=254 Identities=29% Similarity=0.441 Sum_probs=203.6
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCC-CChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDN-FEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
++|++.+.||+|+||.||+|++..+++.||||.+.... ........+.+|+.+++.++||||+++++++.. ....++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~ 79 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIE--DNELNI 79 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEE--CCeEEE
Confidence 47999999999999999999999999999999886533 344555667889999999999999999999887 567899
Q ss_pred EEeeccCCchhhcc----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 209 VFEYMEHDITGLLS----CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 209 v~e~~~~~ll~~~~----~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
||||++++.+..+. .....+++..+..++.||+.||.|||+++++|+||||+|||++.++.++|+|||++......
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~ 159 (267)
T cd08228 80 VLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred EEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccch
Confidence 99999986554332 23446899999999999999999999999999999999999999999999999998765432
Q ss_pred CCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHcCCCCchhhccCCCC
Q 011763 285 HRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTE-VEQLHKIFKLCGSPPDDYWKKSKLP 363 (478)
Q Consensus 285 ~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~-~~~~~~i~~~~g~~~~~~~~~~~~~ 363 (478)
. .......+++.|+|||.+.+ ..++.++||||||+++|+|++|+.||..... ...+...+...+.++.
T Consensus 160 ~-~~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------- 228 (267)
T cd08228 160 T-TAAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPL--------- 228 (267)
T ss_pred h-HHHhcCCCCccccChhhhcc-CCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCC---------
Confidence 2 11223456888999999876 5688999999999999999999999865432 2222222222221110
Q ss_pred CccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 364 HATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 364 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
....++..+.+||.+||..||++||++.++|+.
T Consensus 229 -----------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 229 -----------------PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred -----------------ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence 012467889999999999999999999999863
No 268
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=4.1e-40 Score=322.08 Aligned_cols=260 Identities=18% Similarity=0.265 Sum_probs=203.6
Q ss_pred ccceeeeeeeeecCceEEEEEEECC-----CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLD-----TGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS 203 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~-----~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 203 (478)
.++|++.+.||+|+||.||+|.++. .+..||+|.+.... .......+.+|+.+++.++||||+++++++.. .
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~ 81 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVVRLLGVVSK--G 81 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC--C
Confidence 5689999999999999999997542 34589999986443 23334456789999999999999999999876 5
Q ss_pred ceEEEEEeeccCCchhhccCC----------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEe
Q 011763 204 CSIYLVFEYMEHDITGLLSCP----------DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLA 273 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~----------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~ 273 (478)
...|+||||+.++.+..+... ...++...+..++.||+.||.|||+++|+||||||+|||++.++.++|+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~ 161 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIG 161 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEEC
Confidence 678999999987655544321 1235677889999999999999999999999999999999999999999
Q ss_pred ecccccccCCCCCC-CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCC
Q 011763 274 DFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGS 351 (478)
Q Consensus 274 DFG~a~~~~~~~~~-~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~ 351 (478)
|||+++........ ......++..|+|||.+.+ ..++.++|||||||++|||++ |..||.+....+....+.... .
T Consensus 162 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~-~ 239 (288)
T cd05061 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG-Y 239 (288)
T ss_pred cCCccccccccccccccCCCcccccccCHHHhcc-CCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-C
Confidence 99998754332111 1122234677999999876 668999999999999999998 789998877666554443210 0
Q ss_pred CCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh------CcccCCCC
Q 011763 352 PPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA------SEYFSTKP 420 (478)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~------hp~f~~~~ 420 (478)
+ ......++.+.++|.+||+.||++|||+.++++ ||||....
T Consensus 240 ~---------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~ 287 (288)
T cd05061 240 L---------------------------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVS 287 (288)
T ss_pred C---------------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCC
Confidence 0 001245788999999999999999999999987 99997643
No 269
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.9e-40 Score=318.06 Aligned_cols=250 Identities=20% Similarity=0.326 Sum_probs=202.3
Q ss_pred cccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEE
Q 011763 128 RADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 128 ~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
..++|+++++||+|+||.||+|.+. ++..||+|.+.... ...+.+.+|+.+++.++|+||+++++++.. ....+
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~ 77 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT---MSVQAFLEEANLMKTLQHDKLVRLYAVVTK--EEPIY 77 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc---hhHHHHHHHHHHHHhCCCCCeeeEEEEEcC--CCCcE
Confidence 3578999999999999999999864 56779999986433 234677889999999999999999988876 56789
Q ss_pred EEEeeccCCchhhcc-C-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC
Q 011763 208 LVFEYMEHDITGLLS-C-PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH 285 (478)
Q Consensus 208 lv~e~~~~~ll~~~~-~-~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~ 285 (478)
++|||+.++.+..+. . ....+++..+..++.||+.||.|||+++++|+||||+||+++.++.++|+|||++.......
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05072 78 IITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE 157 (261)
T ss_pred EEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCc
Confidence 999999875544433 2 34568899999999999999999999999999999999999999999999999997654322
Q ss_pred CCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 286 RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 286 ~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
........++..|+|||++.+ ..++.++|||||||++|+|++ |..||......+....+......
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~------------- 223 (261)
T cd05072 158 YTAREGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRM------------- 223 (261)
T ss_pred eeccCCCccceecCCHHHhcc-CCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC-------------
Confidence 222223344678999998876 668899999999999999998 99999987776666555332110
Q ss_pred ccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 365 ATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 365 ~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
.....++.++.+||.+||..||++||+++++++
T Consensus 224 ---------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 224 ---------------PRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred ---------------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 011356788999999999999999999999874
No 270
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-41 Score=342.12 Aligned_cols=253 Identities=29% Similarity=0.500 Sum_probs=206.0
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeeccC
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEH 215 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~~ 215 (478)
-.||+|.||+||-|+|..+...+|||.+... +.+...-+.+||.+.+.|+|.|||+++|.+.+ ++++-|.||-++|
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpek--dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~se--nGf~kIFMEqVPG 656 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEK--DSREVQPLHEEIALHSTLRHKNIVRYLGSVSE--NGFFKIFMEQVPG 656 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccc--cchhhccHHHHHHHHHHHhhHhHHHHhhccCC--CCeEEEEeecCCC
Confidence 3699999999999999999999999998643 23445667899999999999999999999876 6788899999999
Q ss_pred CchhhccCC-CCCC--CHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEec-CCcEEEeecccccccCCCCCCCccc
Q 011763 216 DITGLLSCP-DIKF--SEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNN-EGVLKLADFGLANFSNTGHRQPLTS 291 (478)
Q Consensus 216 ~ll~~~~~~-~~~l--~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~-~~~vkl~DFG~a~~~~~~~~~~~~~ 291 (478)
+.+..+++. =+++ .+..+..|.+||++||.|||++.|||||||-+||||+. .|.+||+|||.++....-+ ....+
T Consensus 657 GSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin-P~TET 735 (1226)
T KOG4279|consen 657 GSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN-PCTET 735 (1226)
T ss_pred CcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCC-ccccc
Confidence 777666543 3456 78899999999999999999999999999999999974 6899999999997654322 23346
Q ss_pred cccCCcccCccccc-CCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCC
Q 011763 292 RVVTLWYRPPELLL-GATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKP 370 (478)
Q Consensus 292 ~~~t~~y~APE~l~-~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 370 (478)
+.||..|||||++. |...|+.++|||||||++.||.||+|||......... |++. .+++-
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA--MFkV-----------------GmyKv 796 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA--MFKV-----------------GMYKV 796 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh--hhhh-----------------cceec
Confidence 77899999999996 4467999999999999999999999999865543322 2211 11111
Q ss_pred CCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 371 QQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 371 ~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
..+. ...++.++++||.+|+.+||..||+|.++|.+||++..
T Consensus 797 HP~i-------Peelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 797 HPPI-------PEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred CCCC-------cHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 1111 12567889999999999999999999999999999865
No 271
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.3e-40 Score=333.14 Aligned_cols=255 Identities=21% Similarity=0.316 Sum_probs=199.7
Q ss_pred ccceeeeeeeeecCceEEEEEEECC-----CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecC
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLD-----TGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSRL 202 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~-----~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 202 (478)
.++|++.+.||.|+||.||+|.+.. +++.||+|+++... .....+.+.+|+.++.++ +|+||+++++++...
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~- 83 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-TASEYKALMTELKILIHIGHHLNVVNLLGACTKP- 83 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-CHHHHHHHHHHHHHHHhhccCcchhheeeeEecC-
Confidence 4589999999999999999997533 45789999987443 334456677899999999 899999999988653
Q ss_pred CceEEEEEeeccCCchhhccCC----------------------------------------------------------
Q 011763 203 SCSIYLVFEYMEHDITGLLSCP---------------------------------------------------------- 224 (478)
Q Consensus 203 ~~~~~lv~e~~~~~ll~~~~~~---------------------------------------------------------- 224 (478)
+..++++|||++++.+..+...
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 4578999999998655433211
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC-CccccccCCcccC
Q 011763 225 ---DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRP 300 (478)
Q Consensus 225 ---~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~-~~~~~~~t~~y~A 300 (478)
...+++..+..++.||+.||.|||++||+||||||+|||+++++.++|+|||++......... ......++..|+|
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 243 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 243 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence 126789999999999999999999999999999999999999999999999999765332211 1122344678999
Q ss_pred cccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccch
Q 011763 301 PELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLR 379 (478)
Q Consensus 301 PE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 379 (478)
||++.+ ..++.++|||||||++|+|++ |..||.+....+.+...+... ..+
T Consensus 244 PE~~~~-~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~-------------------------- 295 (337)
T cd05054 244 PESIFD-KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEG-TRM-------------------------- 295 (337)
T ss_pred cHHhcC-CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhcc-CCC--------------------------
Confidence 999886 678999999999999999998 999998755444433332210 000
Q ss_pred hcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 380 ETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 380 ~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
......++++.+++.+||+.+|++||++.++++|
T Consensus 296 ~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 296 RAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 0012456789999999999999999999999875
No 272
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=3e-42 Score=340.44 Aligned_cols=241 Identities=25% Similarity=0.368 Sum_probs=203.0
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.+....++-||.|+.|.||+|+. .++.||||+++.- -..+|+-|++|+||||+.+.++|.. ...+||
T Consensus 123 Fe~IsELeWlGSGaQGAVF~Grl--~netVAVKKV~el---------kETdIKHLRkLkH~NII~FkGVCtq--sPcyCI 189 (904)
T KOG4721|consen 123 FEEISELEWLGSGAQGAVFLGRL--HNETVAVKKVREL---------KETDIKHLRKLKHPNIITFKGVCTQ--SPCYCI 189 (904)
T ss_pred HHHhhhhhhhccCcccceeeeec--cCceehhHHHhhh---------hhhhHHHHHhccCcceeeEeeeecC--CceeEE
Confidence 44566778899999999999985 5688999998521 1358999999999999999999987 567999
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
|||||..+-|..++....+++......|..+|+.|+.|||.+.|||||||.-||||..+..|||+|||.++..... ..
T Consensus 190 iMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--ST 267 (904)
T KOG4721|consen 190 IMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--ST 267 (904)
T ss_pred eeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh--hh
Confidence 9999999888888888889999999999999999999999999999999999999999999999999999766543 44
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF 368 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 368 (478)
...++||..|||||+|.+ .+.+.++|||||||+|||||||..||+..+...++ + ..|..
T Consensus 268 kMSFaGTVaWMAPEvIrn-ePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAII---w-GVGsN---------------- 326 (904)
T KOG4721|consen 268 KMSFAGTVAWMAPEVIRN-EPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAII---W-GVGSN---------------- 326 (904)
T ss_pred hhhhhhhHhhhCHHHhhc-CCcccccceehhHHHHHHHHhcCCCccccchheeE---E-eccCC----------------
Confidence 567899999999999987 88999999999999999999999999865433221 1 11111
Q ss_pred CCCCCCCccchhc-ccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 369 KPQQPYDSSLRET-FKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 369 ~~~~~~~~~l~~~-~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
.|.-. ....|+-++=||++||+..|..||+..++|.|
T Consensus 327 --------sL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~H 364 (904)
T KOG4721|consen 327 --------SLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLH 364 (904)
T ss_pred --------cccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHH
Confidence 01110 13578889999999999999999999999988
No 273
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=2.5e-40 Score=327.43 Aligned_cols=273 Identities=24% Similarity=0.325 Sum_probs=200.3
Q ss_pred CceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeeccCCchhhc
Q 011763 142 TYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHDITGLL 221 (478)
Q Consensus 142 ~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~~~ll~~~ 221 (478)
+++.||++++..+++.||||++............+.+|+.+++.++|+||+++++++.. ....|++|||++++.+..+
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~--~~~~~~~~e~~~~~~l~~~ 89 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIV--DSELYVVSPLMAYGSCEDL 89 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeec--CCeEEEEEeccCCCCHHHH
Confidence 44556666667789999999998765566677889999999999999999999999877 6678999999998766555
Q ss_pred cCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC------CCccccc
Q 011763 222 SCP--DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR------QPLTSRV 293 (478)
Q Consensus 222 ~~~--~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~------~~~~~~~ 293 (478)
... ...+++..+..++.||+.||.|||+++|+|+||||+|||++.++.+||+|||.+........ .......
T Consensus 90 l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (314)
T cd08216 90 LKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSV 169 (314)
T ss_pred HHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccccccccccccccc
Confidence 432 34689999999999999999999999999999999999999999999999998864432111 1112334
Q ss_pred cCCcccCcccccCC-CCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccC---
Q 011763 294 VTLWYRPPELLLGA-TDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFK--- 369 (478)
Q Consensus 294 ~t~~y~APE~l~~~-~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~--- 369 (478)
++..|+|||++... ..++.++|||||||++|+|++|..||........+..... +..+. .+.....+......
T Consensus 170 ~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~ 246 (314)
T cd08216 170 KNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVR--GTVPC-LLDKSTYPLYEDSMSQS 246 (314)
T ss_pred ccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--ccCcc-ccccCchhhhcCCcCcc
Confidence 57789999998653 3578899999999999999999999987765544333222 11111 11111111000000
Q ss_pred -----CCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 370 -----PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 370 -----~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
...............++.++.+||.+||.+||++|||+.++|+||||+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~ 301 (314)
T cd08216 247 RSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQC 301 (314)
T ss_pred cccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhh
Confidence 00000000001112356789999999999999999999999999999753
No 274
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=9.1e-40 Score=312.50 Aligned_cols=259 Identities=33% Similarity=0.522 Sum_probs=211.6
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
+|.+.+.||+|++|.||+|.+..+++.|++|++..........+.+.+|+.++++++|+||+++++.+.......+++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 48889999999999999999998999999999987655556677888999999999999999999988773337899999
Q ss_pred eeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC-Cc
Q 011763 211 EYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PL 289 (478)
Q Consensus 211 e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~-~~ 289 (478)
||+++..+..+......+++..+..++.|++.+|.|||+.+++|+||+|+||+++.++.++|+|||.+......... ..
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 160 (260)
T cd06606 81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGT 160 (260)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccc
Confidence 99987666655555558999999999999999999999999999999999999999999999999999766543210 12
Q ss_pred cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccC
Q 011763 290 TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFK 369 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 369 (478)
....++..|+|||.+.+ ..++.++||||||+++|+|++|..||....... ..+.......
T Consensus 161 ~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~----------------- 220 (260)
T cd06606 161 GSVRGTPYWMAPEVIRG-EEYGRAADIWSLGCTVIEMATGKPPWSELGNPM--AALYKIGSSG----------------- 220 (260)
T ss_pred cCCCCCccccCHhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH--HHHHhccccC-----------------
Confidence 33466889999998876 558899999999999999999999998766221 1111111000
Q ss_pred CCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 370 PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 370 ~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
........++..+.+||.+||..||.+||++.++|.||||
T Consensus 221 -------~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 221 -------EPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred -------CCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 0001113457899999999999999999999999999997
No 275
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=7.5e-40 Score=315.28 Aligned_cols=249 Identities=22% Similarity=0.321 Sum_probs=200.3
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|++.+.||.|+||.||++.+. +++.||+|.++..... .+.+.+|+.++++++|+||+++++++.. ....|+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l 78 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMD---PKDFLAEAQIMKKLRHPKLIQLYAVCTL--EEPIYI 78 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCccc---HHHHHHHHHHHHHCCCCCccceeEEEec--CCCeee
Confidence 467999999999999999999875 4578999998754432 3557789999999999999999998876 567899
Q ss_pred EEeeccCCchhhcc-CC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 209 VFEYMEHDITGLLS-CP-DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 209 v~e~~~~~ll~~~~-~~-~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
||||+.++.+..+. .. ...+++..+..++.||+.||.|||++||+|+||||+||++++++.++|+|||++........
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05068 79 VTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY 158 (261)
T ss_pred eeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc
Confidence 99999765544443 32 24689999999999999999999999999999999999999999999999999976653221
Q ss_pred CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 287 QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 287 ~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
........+..|+|||++.+ ..++.++|||||||++|+|++ |+.||.+.+....+..+......+
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~------------- 224 (261)
T cd05068 159 EAREGAKFPIKWTAPEAALY-NRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMP------------- 224 (261)
T ss_pred cccCCCcCceeccCcccccc-CCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC-------------
Confidence 11112222457999998876 678999999999999999999 999999887766665553321100
Q ss_pred cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 366 TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
....++..+.+||.+||+.||.+||++.+++.
T Consensus 225 ---------------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 225 ---------------CPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred ---------------CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 01246788999999999999999999999874
No 276
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.2e-40 Score=322.95 Aligned_cols=264 Identities=25% Similarity=0.423 Sum_probs=208.4
Q ss_pred ceeeeeeeeecCceEEEEEEEC---CCCcEEEEEEeecCCC--ChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCc
Q 011763 131 AFEKLEKIGQGTYSSVFRARDL---DTGKIVALKKVRFDNF--EPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSC 204 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~---~~~~~vAlK~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 204 (478)
+|++.+.||.|+||.||++++. .+|..||+|++..... .....+.+.+|+.+|+.+ +|+||+++++.+.. ..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~--~~ 78 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT--DT 78 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeec--CC
Confidence 4889999999999999999874 4789999999875432 123345677899999999 69999999988876 56
Q ss_pred eEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 205 SIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
..|+||||++++.+.........+++..+..++.||+.||.|||++|++||||+|+|||++.++.+||+|||++......
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 79 KLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred eEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence 78999999998766655555567899999999999999999999999999999999999999999999999999765443
Q ss_pred CCCCccccccCCcccCcccccCC-CCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCC
Q 011763 285 HRQPLTSRVVTLWYRPPELLLGA-TDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP 363 (478)
Q Consensus 285 ~~~~~~~~~~t~~y~APE~l~~~-~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 363 (478)
.........++..|+|||++.+. ..++.++|||||||++|+|++|..||...........+...+.....
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~--------- 229 (290)
T cd05613 159 EVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP--------- 229 (290)
T ss_pred cccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCC---------
Confidence 22223345678899999998642 34678999999999999999999999754332222222221100000
Q ss_pred CccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCcc-----CHHHHHhCcccCCCCC
Q 011763 364 HATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRA-----TASAALASEYFSTKPY 421 (478)
Q Consensus 364 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~-----ta~e~L~hp~f~~~~~ 421 (478)
+ ....++..+.+||.+||..||.+|+ ++.+++.||||+...|
T Consensus 230 ---------~-------~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~ 276 (290)
T cd05613 230 ---------P-------YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINW 276 (290)
T ss_pred ---------C-------CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCH
Confidence 0 0124678899999999999999997 8999999999987654
No 277
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=3.7e-40 Score=323.30 Aligned_cols=258 Identities=26% Similarity=0.455 Sum_probs=211.3
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
.|....+||+|+||.||++.+..+++.||+|++.... ......+.+|+.+++.++|+||+++++.+.. .+..|+||
T Consensus 21 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~ 96 (292)
T cd06657 21 YLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLV--GDELWVVM 96 (292)
T ss_pred HhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc--hhHHHHHHHHHHHHHhcCCcchhheeeEEEe--CCEEEEEE
Confidence 3555578999999999999999999999999986432 3345668889999999999999999999987 67899999
Q ss_pred eeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCcc
Q 011763 211 EYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLT 290 (478)
Q Consensus 211 e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~ 290 (478)
||++++.+..+... ..+++..+..++.||+.+|.|||++|++|+||+|+||+++.++.++|+|||++....... ....
T Consensus 97 e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-~~~~ 174 (292)
T cd06657 97 EFLEGGALTDIVTH-TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRK 174 (292)
T ss_pred ecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceeccccc-cccc
Confidence 99998777665533 368999999999999999999999999999999999999999999999999986554322 1223
Q ss_pred ccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCC
Q 011763 291 SRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKP 370 (478)
Q Consensus 291 ~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 370 (478)
...+++.|+|||++.+ ..++.++|||||||++|+|++|.+||.+....+.+..+.......
T Consensus 175 ~~~~~~~y~~pE~~~~-~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~------------------ 235 (292)
T cd06657 175 SLVGTPYWMAPELISR-LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPK------------------ 235 (292)
T ss_pred ccccCccccCHHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcc------------------
Confidence 3457889999998865 567899999999999999999999999877665555443211000
Q ss_pred CCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCC
Q 011763 371 QQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPY 421 (478)
Q Consensus 371 ~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~ 421 (478)
+ .....++..+.++|.+||..||.+||++.++|.||||.....
T Consensus 236 -------~-~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~ 278 (292)
T cd06657 236 -------L-KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 278 (292)
T ss_pred -------c-CCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCC
Confidence 0 011346788999999999999999999999999999987553
No 278
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=3.5e-40 Score=325.96 Aligned_cols=256 Identities=29% Similarity=0.475 Sum_probs=211.1
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
.+.|+..+.||+|+||.||++++..+++.||+|.+..... .......+.+|+.+++.++|+|++++++++.. ....+
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~ 91 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR--EHTAW 91 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc--CCeeE
Confidence 3468899999999999999999999999999999875432 33445667789999999999999999999877 56789
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
+||||+.+.+...+.....++++..+..++.||+.||.|||+++++|+||+|+|||++.++.++|+|||++......
T Consensus 92 lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~--- 168 (308)
T cd06634 92 LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--- 168 (308)
T ss_pred EEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc---
Confidence 99999998777666555567899999999999999999999999999999999999999999999999998755432
Q ss_pred CccccccCCcccCcccccC--CCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 288 PLTSRVVTLWYRPPELLLG--ATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~--~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
....+++.|+|||++.+ ...++.++|||||||++|+|++|..||...+..+....+..... +.
T Consensus 169 --~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-~~------------ 233 (308)
T cd06634 169 --NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES-PA------------ 233 (308)
T ss_pred --ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC-CC------------
Confidence 23456888999998752 24578899999999999999999999987665544444332110 00
Q ss_pred cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 366 TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
.....++..+.+||.+||..+|.+||++.++++|||+..
T Consensus 234 --------------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 234 --------------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred --------------cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence 001246778999999999999999999999999999976
No 279
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=3.2e-40 Score=327.35 Aligned_cols=253 Identities=19% Similarity=0.342 Sum_probs=200.5
Q ss_pred cccceeeeeeeeecCceEEEEEEECCCCcE----EEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC
Q 011763 128 RADAFEKLEKIGQGTYSSVFRARDLDTGKI----VALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS 203 (478)
Q Consensus 128 ~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~----vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 203 (478)
...+|++++.||+|+||+||+|++..++.. ||+|+++... .......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~--- 80 (316)
T cd05108 5 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLT--- 80 (316)
T ss_pred chhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC---
Confidence 356899999999999999999987665554 8999986432 34455678889999999999999999998865
Q ss_pred ceEEEEEeeccCCc-hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccC
Q 011763 204 CSIYLVFEYMEHDI-TGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSN 282 (478)
Q Consensus 204 ~~~~lv~e~~~~~l-l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~ 282 (478)
...++|+||+.++. .+.+......+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 81 ~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~ 160 (316)
T cd05108 81 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 160 (316)
T ss_pred CCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEcccccccccc
Confidence 24679999998754 44444445568899999999999999999999999999999999999999999999999998665
Q ss_pred CCCCCC-ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccC
Q 011763 283 TGHRQP-LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKS 360 (478)
Q Consensus 283 ~~~~~~-~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 360 (478)
...... ......+..|+|||++.+ ..++.++|||||||++|||++ |..||.+....+. ..+......++.
T Consensus 161 ~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~-~~~~~~~~~~~~------ 232 (316)
T cd05108 161 ADEKEYHAEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ------ 232 (316)
T ss_pred CCCcceeccCCccceeecChHHhcc-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHhCCCCCCC------
Confidence 322211 122233678999999876 678999999999999999997 9999987665443 333321111110
Q ss_pred CCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 361 KLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 361 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
....+.++.++|.+||..||.+||++.+++.+
T Consensus 233 ---------------------~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 233 ---------------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred ---------------------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 12356789999999999999999999999976
No 280
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=6.8e-40 Score=316.49 Aligned_cols=253 Identities=24% Similarity=0.357 Sum_probs=203.6
Q ss_pred ccceeeeeeeeecCceEEEEEEECCC---CcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCce
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDT---GKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCS 205 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~---~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 205 (478)
.++|++.+.||+|+||+||+|.+..+ ...||+|+++... .......+.+|+.+++.++||||+++++++.. ...
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~ 79 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK--SRP 79 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEec--CCc
Confidence 45899999999999999999987643 4589999987543 34445667889999999999999999998876 567
Q ss_pred EEEEEeeccCCchhhc-cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 206 IYLVFEYMEHDITGLL-SCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~-~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
.++||||++++.+..+ ......+++..+..++.||+.||.|||+++|+|+||||+|||+++++.++|+|||++......
T Consensus 80 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 80 VMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred eEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 8999999998655544 344457899999999999999999999999999999999999999999999999999876421
Q ss_pred CCC-CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCC
Q 011763 285 HRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL 362 (478)
Q Consensus 285 ~~~-~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 362 (478)
... .......+..|+|||.+.+ ..++.++|||||||++|+|++ |..||......+....+......+.
T Consensus 160 ~~~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------- 229 (266)
T cd05033 160 EATYTTKGGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPP--------- 229 (266)
T ss_pred ccceeccCCCCCccccChhhhcc-CCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCC---------
Confidence 111 1112233678999998876 678999999999999999998 9999987776665555433111000
Q ss_pred CCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 363 PHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
....+..+.+|+.+||+.||++||++.+++++
T Consensus 230 -------------------~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 230 -------------------PMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred -------------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 12467889999999999999999999999864
No 281
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=5.1e-40 Score=320.40 Aligned_cols=254 Identities=20% Similarity=0.354 Sum_probs=202.2
Q ss_pred cccceeeeeeeeecCceEEEEEEE----CCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC
Q 011763 128 RADAFEKLEKIGQGTYSSVFRARD----LDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS 203 (478)
Q Consensus 128 ~~~~y~~~~~LG~G~~g~V~~~~~----~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 203 (478)
..++|++.+.||+|+||+||+|.+ ..++..||+|.+.... .......+.+|+.+++.++||||+++++++.. .
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~ 79 (283)
T cd05090 3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQ--E 79 (283)
T ss_pred ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEec--C
Confidence 356899999999999999999985 3456789999987543 34455678889999999999999999999876 5
Q ss_pred ceEEEEEeeccCCchhhccC-C----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEec
Q 011763 204 CSIYLVFEYMEHDITGLLSC-P----------------DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNN 266 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~-~----------------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~ 266 (478)
...|+||||+.++.+..+.. . ...+++..+..++.||+.||.|||+++|+|+||||+|||+++
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~ 159 (283)
T cd05090 80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGE 159 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcC
Confidence 67899999999765544331 1 224788999999999999999999999999999999999999
Q ss_pred CCcEEEeecccccccCCCCC-CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 011763 267 EGVLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHK 344 (478)
Q Consensus 267 ~~~vkl~DFG~a~~~~~~~~-~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~ 344 (478)
++.+||+|||+++....... .......++..|+|||++.+ ..++.++|||||||++|||++ |.+||.+....+....
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05090 160 QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMY-GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEM 238 (283)
T ss_pred CCcEEeccccccccccCCcceecccCCCccceecChHHhcc-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 99999999999976533221 11122344677999999876 568999999999999999998 9999988776555444
Q ss_pred HHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 345 IFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 345 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
+... ..+ .....+++.+.++|.+||+.||.+||++.+++++
T Consensus 239 ~~~~-~~~---------------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 239 VRKR-QLL---------------------------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred HHcC-CcC---------------------------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 4221 100 0113567889999999999999999999999864
No 282
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=4.8e-40 Score=319.57 Aligned_cols=253 Identities=16% Similarity=0.253 Sum_probs=200.0
Q ss_pred ccceeeeeeeeecCceEEEEEEEC-----CCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDL-----DTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS 203 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~-----~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 203 (478)
.++|++.+.||+|+||.||++.+. .++..||+|++.... .......+.+|+.+++.++||||+++++++.. .
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~--~ 81 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ--G 81 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC--C
Confidence 568999999999999999999864 235679999986433 23344567889999999999999999999876 5
Q ss_pred ceEEEEEeeccCCchhhccCC----------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEe
Q 011763 204 CSIYLVFEYMEHDITGLLSCP----------DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLA 273 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~----------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~ 273 (478)
...++||||++++.+..+... ...+++..+..++.||+.||.|||+.+++|+||||+|||+++++.++|+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~ 161 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG 161 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEEC
Confidence 679999999998655544321 1235778899999999999999999999999999999999999999999
Q ss_pred ecccccccCCCCC-CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCC
Q 011763 274 DFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGS 351 (478)
Q Consensus 274 DFG~a~~~~~~~~-~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~ 351 (478)
|||++........ .......+++.|+|||++.+ ..++.++|||||||++|||++ |..||.+.+..+.+..+.... .
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~-~ 239 (277)
T cd05062 162 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGG-L 239 (277)
T ss_pred CCCCccccCCcceeecCCCCccCHhhcChhHhhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-c
Confidence 9999875432211 11122344678999999876 668999999999999999999 789998877666555443211 0
Q ss_pred CCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 352 PPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
+ .....++..+.+||.+||+.||++|||+.+++++
T Consensus 240 ~---------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 240 L---------------------------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred C---------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0 0012467789999999999999999999999864
No 283
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=4.8e-40 Score=316.08 Aligned_cols=250 Identities=21% Similarity=0.319 Sum_probs=200.6
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|++++.||+|+||+||++.+.. +..||+|.+...... ...+.+|+.+++.++||||+++++++.. ....|+
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l 76 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMS---EDEFIEEAKVMMKLSHEKLVQLYGVCTK--QRPIYI 76 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCccc---HHHHHHHHHHHhcCCCCCeeeEEEEEcc--CCCcEE
Confidence 4579999999999999999998654 456999998754332 3457889999999999999999999876 566899
Q ss_pred EEeeccCCchhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 209 VFEYMEHDITGLLS-CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 209 v~e~~~~~ll~~~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
||||+.++.+..+. .....+++..++.++.||+.||.|||++|++|+||||+|||++.++.+||+|||.++........
T Consensus 77 v~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05113 77 VTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT 156 (256)
T ss_pred EEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCcee
Confidence 99999876554443 33447899999999999999999999999999999999999999999999999998765432211
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcc
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHAT 366 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 366 (478)
......++..|+|||++.+ ..++.++|||||||++|+|++ |..||...+..+....+......+.
T Consensus 157 ~~~~~~~~~~y~~pe~~~~-~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~------------- 222 (256)
T cd05113 157 SSVGSKFPVRWSPPEVLLY-SKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYR------------- 222 (256)
T ss_pred ecCCCccChhhCCHHHHhc-CcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCC-------------
Confidence 1122234567999999876 568899999999999999998 9999988777665555533211100
Q ss_pred ccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 367 LFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 367 ~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
....+..+.++|.+||..||.+|||+.++|.+
T Consensus 223 ---------------~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 223 ---------------PHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred ---------------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 01357889999999999999999999999864
No 284
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=6.9e-40 Score=313.72 Aligned_cols=245 Identities=24% Similarity=0.353 Sum_probs=195.6
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeeccC
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEH 215 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~~ 215 (478)
+.||+|+||.||+|++..+++.||+|.+... ...+....+.+|+++++.++||||+++++++.. ....|+||||+.+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~ 77 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ--KQPIYIVMELVQG 77 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC--CCCeEEEEeeccC
Confidence 3689999999999999989999999988643 244556678899999999999999999999877 5679999999988
Q ss_pred Cchhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC-ccccc
Q 011763 216 DITGLLS-CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP-LTSRV 293 (478)
Q Consensus 216 ~ll~~~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~-~~~~~ 293 (478)
+.+..+. .....+++..++.++.||+.||.|||+++|+|+||||+|||++.++.+||+|||++.......... .....
T Consensus 78 ~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 157 (252)
T cd05084 78 GDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ 157 (252)
T ss_pred CcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence 6555443 344568999999999999999999999999999999999999999999999999987543221111 01112
Q ss_pred cCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCC
Q 011763 294 VTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQ 372 (478)
Q Consensus 294 ~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 372 (478)
.+..|+|||.+.+ ..++.++|||||||++|+|++ |.+||...+..+....+..... +
T Consensus 158 ~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~-~-------------------- 215 (252)
T cd05084 158 IPVKWTAPEALNY-GRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVR-L-------------------- 215 (252)
T ss_pred CceeecCchhhcC-CCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC-C--------------------
Confidence 2456999998876 568999999999999999998 8899987666554443322110 0
Q ss_pred CCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 373 PYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 373 ~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
.....++..+.+||.+||..||++|||+.++++
T Consensus 216 -------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 216 -------PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred -------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 001245788999999999999999999999974
No 285
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.1e-39 Score=310.57 Aligned_cols=252 Identities=33% Similarity=0.515 Sum_probs=208.3
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
+|++.+.||.|++|.||++.+..+++.|++|++..... .....+.+|+.+++.++|+||+++++++.. ....++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~l~~ 76 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLK--KDELWIVM 76 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEec--CCeEEEEE
Confidence 48889999999999999999988899999999976542 355678899999999999999999999877 56789999
Q ss_pred eeccCCchhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc
Q 011763 211 EYMEHDITGLLSC-PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL 289 (478)
Q Consensus 211 e~~~~~ll~~~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 289 (478)
||+++..+..+.. ....+++..+..++.||+.+|.|||++|++|+||+|+||++++++.++|+|||.+........ .
T Consensus 77 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~ 154 (253)
T cd05122 77 EFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--R 154 (253)
T ss_pred ecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc--c
Confidence 9999755554443 335789999999999999999999999999999999999999999999999999976654321 2
Q ss_pred cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccC
Q 011763 290 TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFK 369 (478)
Q Consensus 290 ~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 369 (478)
....++..|+|||++.+ ..++.++||||||+++|+|++|+.||...+.......+... ..+...
T Consensus 155 ~~~~~~~~~~~PE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~------------- 218 (253)
T cd05122 155 NTMVGTPYWMAPEVING-KPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATN--GPPGLR------------- 218 (253)
T ss_pred cceecCCcccCHHHHcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc--CCCCcC-------------
Confidence 34567889999999876 55889999999999999999999999877655554443321 110000
Q ss_pred CCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcc
Q 011763 370 PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEY 415 (478)
Q Consensus 370 ~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~ 415 (478)
....++..+.++|.+||..||++|||+.++|+|||
T Consensus 219 -----------~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 219 -----------NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred -----------cccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 00124788999999999999999999999999998
No 286
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=6.5e-40 Score=313.96 Aligned_cols=252 Identities=27% Similarity=0.428 Sum_probs=210.6
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
+|++.++||.|+||.||++.+..+++.||+|.+............+.+|+.+++.++|+||+++++++.. ....|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v~ 78 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLD--GNKLCIVM 78 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhcc--CCEEEEEe
Confidence 4899999999999999999999999999999998765555556677889999999999999999999877 57899999
Q ss_pred eeccCCchhhccCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 211 EYMEHDITGLLSCP----DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 211 e~~~~~ll~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
||+++..+..+... ...+++..++.++.||+.||.|||++|++|+||+|+||++++++.+||+|||++......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-- 156 (256)
T cd08530 79 EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN-- 156 (256)
T ss_pred hhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC--
Confidence 99987655444322 356899999999999999999999999999999999999999999999999999766543
Q ss_pred CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcc
Q 011763 287 QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHAT 366 (478)
Q Consensus 287 ~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 366 (478)
......+++.|+|||.+.+ ..++.++|+||||+++|+|++|+.||...+..+....+......
T Consensus 157 -~~~~~~~~~~~~~Pe~~~~-~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------------- 219 (256)
T cd08530 157 -MAKTQIGTPHYMAPEVWKG-RPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYP--------------- 219 (256)
T ss_pred -CcccccCCccccCHHHHCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC---------------
Confidence 2223456889999999876 67888999999999999999999999987765554443221100
Q ss_pred ccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 367 LFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 367 ~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
.....++.+++++|.+||..+|.+|||+.++|+||++
T Consensus 220 -------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 220 -------------PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred -------------CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 0012467889999999999999999999999999974
No 287
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=6.4e-40 Score=322.03 Aligned_cols=262 Identities=24% Similarity=0.386 Sum_probs=207.3
Q ss_pred cccccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCc
Q 011763 126 PLRADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSC 204 (478)
Q Consensus 126 ~~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 204 (478)
.+..++|++.+.||+|+||.||++.+..+++.||||+++..... .....+..|+.++..+ .|+||+++++++.. ..
T Consensus 11 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~ 87 (296)
T cd06618 11 PADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK-EENKRILMDLDVVLKSHDCPYIVKCYGYFIT--DS 87 (296)
T ss_pred cCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh-HHHHHHHHHHHHHHhccCCCchHhhheeeec--CC
Confidence 34477899999999999999999999888999999999765432 3344556677777776 59999999999987 66
Q ss_pred eEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCcEEEecCCcEEEeecccccccCC
Q 011763 205 SIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNT 283 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~ 283 (478)
..|++|||+++.+...+......+++..+..++.||+.||.|||+ .+|+||||+|+||+++.++.+||+|||++.....
T Consensus 88 ~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 88 DVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVD 167 (296)
T ss_pred eEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence 799999999876665555545579999999999999999999997 5999999999999999999999999999875533
Q ss_pred CCCCCccccccCCcccCcccccCC---CCCCChhhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHcCCCCchhhcc
Q 011763 284 GHRQPLTSRVVTLWYRPPELLLGA---TDYGPSVDLWSVGCVFAELLIGKPILQGRTE-VEQLHKIFKLCGSPPDDYWKK 359 (478)
Q Consensus 284 ~~~~~~~~~~~t~~y~APE~l~~~---~~~~~~~DiwslG~il~elltG~~pf~~~~~-~~~~~~i~~~~g~~~~~~~~~ 359 (478)
.. ......++..|+|||.+.+. ..++.++|||||||++|+|++|+.||..... .+.+..+.... .+.
T Consensus 168 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~----- 238 (296)
T cd06618 168 SK--AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEE--PPS----- 238 (296)
T ss_pred CC--cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCC--CCC-----
Confidence 21 11223467889999998653 2478899999999999999999999976432 33333332210 000
Q ss_pred CCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 360 SKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
. .....++.++.+||.+||..||.+||++.+++.||||..
T Consensus 239 --------------~-----~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 278 (296)
T cd06618 239 --------------L-----PPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRR 278 (296)
T ss_pred --------------C-----CCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhc
Confidence 0 000146788999999999999999999999999999975
No 288
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=7.4e-40 Score=316.98 Aligned_cols=253 Identities=19% Similarity=0.259 Sum_probs=199.1
Q ss_pred eeeeeeeeecCceEEEEEEECCCCc--EEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeec----CCce
Q 011763 132 FEKLEKIGQGTYSSVFRARDLDTGK--IVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSR----LSCS 205 (478)
Q Consensus 132 y~~~~~LG~G~~g~V~~~~~~~~~~--~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~----~~~~ 205 (478)
|.+.+.||+|+||.||+|++..++. .||+|.++.........+.+.+|+.+++.++|+||+++++++... ....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3567899999999999999877665 699999876655556677788999999999999999999876432 1235
Q ss_pred EEEEEeeccCCchhhcc------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeeccccc
Q 011763 206 IYLVFEYMEHDITGLLS------CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLAN 279 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~~------~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~ 279 (478)
.++||||+.++.+..+. .....+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 160 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSK 160 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCccc
Confidence 78999999975544322 123458999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCC-CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhh
Q 011763 280 FSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYW 357 (478)
Q Consensus 280 ~~~~~~~~-~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~ 357 (478)
........ .......++.|+|||++.+ ..++.++|||||||++|+|++ |++||.+....+....+... ..+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~--~~~---- 233 (272)
T cd05075 161 KIYNGDYYRQGRIAKMPVKWIAIESLAD-RVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQG--NRL---- 233 (272)
T ss_pred ccCcccceecCCcccCCcccCCHHHccC-CCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC--CCC----
Confidence 65432211 1112234678999998876 678999999999999999999 89999887665554444321 000
Q ss_pred ccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 358 KKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
.....++..+.++|.+||+.||++|||+.+++++
T Consensus 234 ----------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 234 ----------------------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred ----------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0012567889999999999999999999999864
No 289
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=6.4e-40 Score=320.74 Aligned_cols=251 Identities=22% Similarity=0.326 Sum_probs=201.9
Q ss_pred ccceeeeeeeeecCceEEEEEEE-----CCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARD-----LDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS 203 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~-----~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 203 (478)
.++|.+.+.||+|+||+||++.+ ..++..+|+|.+... .......+.+|+.++++++||||+++++++.. .
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~ 79 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVE--G 79 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec--C
Confidence 56899999999999999999985 234567999988643 24445678899999999999999999999876 6
Q ss_pred ceEEEEEeeccCCchhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcE
Q 011763 204 CSIYLVFEYMEHDITGLLSCP-------------DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVL 270 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~-------------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~v 270 (478)
...|+||||++++.+..+... ...+++..+..++.||+.||+|||++|++||||||+|||+++++.+
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~ 159 (288)
T cd05093 80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV 159 (288)
T ss_pred CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcE
Confidence 779999999997655444321 1248999999999999999999999999999999999999999999
Q ss_pred EEeecccccccCCCCC-CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHH
Q 011763 271 KLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKL 348 (478)
Q Consensus 271 kl~DFG~a~~~~~~~~-~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~ 348 (478)
||+|||++........ .......++..|+|||++.+ ..++.++|||||||++|+|++ |.+||......+....+...
T Consensus 160 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~ 238 (288)
T cd05093 160 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG 238 (288)
T ss_pred EeccCCccccccCCceeecCCCCCccccccCHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence 9999999975533211 11122334678999998876 678999999999999999998 99999888776666655431
Q ss_pred cCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 349 CGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 349 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
. .+ .....++.++.+||.+||+.||.+|||+.+++.
T Consensus 239 ~--~~--------------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 239 R--VL--------------------------QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred C--cC--------------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 1 00 001246788999999999999999999999853
No 290
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=7.2e-40 Score=316.88 Aligned_cols=253 Identities=19% Similarity=0.266 Sum_probs=201.1
Q ss_pred eeeeeeeeecCceEEEEEEECC---CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC----c
Q 011763 132 FEKLEKIGQGTYSSVFRARDLD---TGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS----C 204 (478)
Q Consensus 132 y~~~~~LG~G~~g~V~~~~~~~---~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~----~ 204 (478)
|++.+.||+|+||.||+|.... ++..||+|++..+.........+.+|+.+++.++||||+++++++..... .
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 6788999999999999998754 34789999998765555666778899999999999999999988754221 3
Q ss_pred eEEEEEeeccCCchhhcc------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccc
Q 011763 205 SIYLVFEYMEHDITGLLS------CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLA 278 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~------~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a 278 (478)
..+++|||+.++.+..+. .....+++..+..++.||+.||.|||+++|+||||||+||++++++.+||+|||++
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence 479999999976554332 12346899999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCC-CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchh
Q 011763 279 NFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDY 356 (478)
Q Consensus 279 ~~~~~~~~~-~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~ 356 (478)
+........ .......+..|+|||++.+ ..++.++|||||||++|||++ |.+||.+....+.+..+.... .+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~--~~--- 234 (273)
T cd05035 161 KKIYSGDYYRQGRIAKMPVKWIAIESLAD-RVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGN--RL--- 234 (273)
T ss_pred eeccccccccccccccCCccccCHhhccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC--CC---
Confidence 765432211 1111234668999998865 678999999999999999999 899998877766555443210 00
Q ss_pred hccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 357 WKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
.....++..+.++|.+||+.||.+|||+.+++++
T Consensus 235 -----------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 235 -----------------------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred -----------------------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0113567889999999999999999999999864
No 291
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=6.1e-40 Score=318.96 Aligned_cols=253 Identities=21% Similarity=0.314 Sum_probs=200.6
Q ss_pred ccceeeeeeeeecCceEEEEEEECC-----CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLD-----TGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS 203 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~-----~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 203 (478)
.++|++.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.++|+||+++++++.+ .
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~ 81 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC-SEQDESDFLMEALIMSKFNHQNIVRLIGVSFE--R 81 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc--C
Confidence 4689999999999999999999876 77889999886443 23344567889999999999999999998876 4
Q ss_pred ceEEEEEeeccCCchhhccCCC-------CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCC---cEEEe
Q 011763 204 CSIYLVFEYMEHDITGLLSCPD-------IKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG---VLKLA 273 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~~-------~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~---~vkl~ 273 (478)
...++||||+.++.+..+.... ..+++..+..++.||+.||.|||+++++|+||||+|||++.++ .+||+
T Consensus 82 ~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEec
Confidence 5689999999876555443221 2589999999999999999999999999999999999998765 59999
Q ss_pred ecccccccCCCCCC-CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCC
Q 011763 274 DFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGS 351 (478)
Q Consensus 274 DFG~a~~~~~~~~~-~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~ 351 (478)
|||+++........ .......+..|+|||++.+ ..++.++|||||||++|+|++ |..||...+..+....+... ..
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~-~~ 239 (277)
T cd05036 162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLD-GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGG-GR 239 (277)
T ss_pred cCccccccCCccceecCCCCCccHhhCCHHHHhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-Cc
Confidence 99999765322111 1112233567999999876 668999999999999999997 99999987766555443221 00
Q ss_pred CCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 352 PPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
+ .....++..+.+||.+||+.||++|||+.++|+|
T Consensus 240 ~---------------------------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 240 L---------------------------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred C---------------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0 0012567889999999999999999999999976
No 292
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=5.3e-40 Score=315.54 Aligned_cols=249 Identities=22% Similarity=0.331 Sum_probs=200.0
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
.+|++.+.||+|+||.||++.+. ++..+|+|++...... ...+.+|+.+++.++|+||+++++++.. ....|+|
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv 77 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMS---EDDFIEEAKVMMKLSHPNLVQLYGVCTK--QRPIFIV 77 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEEEEEEEEcC--CCceEEE
Confidence 47999999999999999999875 4668999998654332 2356779999999999999999998876 5678999
Q ss_pred EeeccCCchh-hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 210 FEYMEHDITG-LLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 210 ~e~~~~~ll~-~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
|||++++.+. .+......+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||+++.........
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~ 157 (256)
T cd05059 78 TEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTS 157 (256)
T ss_pred EecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccc
Confidence 9999876544 443434578999999999999999999999999999999999999999999999999987654322111
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATL 367 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 367 (478)
......+..|+|||++.+ ..++.++|||||||++|+|++ |+.||...+..+....+......
T Consensus 158 ~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---------------- 220 (256)
T cd05059 158 SQGTKFPVKWAPPEVFDY-SRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRL---------------- 220 (256)
T ss_pred cCCCCCCccccCHHHhcc-CCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcC----------------
Confidence 112223457999998876 678999999999999999999 89999887776665554321100
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
......+..+.+|+.+||..+|++|||+.++++.
T Consensus 221 ------------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 221 ------------YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred ------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 0012468899999999999999999999999864
No 293
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-41 Score=336.61 Aligned_cols=263 Identities=29% Similarity=0.444 Sum_probs=215.9
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCC-CChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDN-FEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
..-|..++.||-|+||.|.++...+|...||+|.+++.. +...++..+..|..||..-+.+-||+||..|++ .+.+|
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQD--kdnLY 705 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQD--KDNLY 705 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEecc--CCceE
Confidence 345999999999999999999999999999999997643 355666777789999999999999999888887 77899
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeeccccccc------
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFS------ 281 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~------ 281 (478)
+||+|++|+.+..++-..+-|+|..++.|+.+|..|+++.|..|+|||||||+|||||.+|++||+|||+|.-+
T Consensus 706 FVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHds 785 (1034)
T KOG0608|consen 706 FVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 785 (1034)
T ss_pred EEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceecccc
Confidence 99999998765555555567999999999999999999999999999999999999999999999999998421
Q ss_pred ---CCCCC--C------------------------------CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHH
Q 011763 282 ---NTGHR--Q------------------------------PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAEL 326 (478)
Q Consensus 282 ---~~~~~--~------------------------------~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~el 326 (478)
..+.. + .....+||+.|+|||+|.. ..|+..+|+||.|||||||
T Consensus 786 kYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r-~g~~q~cdwws~gvil~em 864 (1034)
T KOG0608|consen 786 KYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLAR-TGYTQLCDWWSVGVILYEM 864 (1034)
T ss_pred ccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcc-cCccccchhhHhhHHHHHH
Confidence 11100 0 0123578999999999987 6789999999999999999
Q ss_pred HhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchh-cccCCchhHHHHHHHhcCCCCCCcc
Q 011763 327 LIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRE-TFKDLPTTAVNLIETLLSVEPYKRA 405 (478)
Q Consensus 327 ltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~l~~Li~~mL~~dP~~R~ 405 (478)
+.|++||...+..++..+++. |. ..|.- ...+++.++.+||.++.+ +++.|+
T Consensus 865 ~~g~~pf~~~tp~~tq~kv~n---------w~-----------------~~l~~~~~~~ls~e~~~li~kLc~-sad~RL 917 (1034)
T KOG0608|consen 865 LVGQPPFLADTPGETQYKVIN---------WR-----------------NFLHIPYQGNLSKEALDLIQKLCC-SADSRL 917 (1034)
T ss_pred hhCCCCccCCCCCcceeeeee---------hh-----------------hccccccccccCHHHHHHHHHHhc-Chhhhh
Confidence 999999998887776655532 21 11111 124789999999999654 788997
Q ss_pred C---HHHHHhCcccCCCCC
Q 011763 406 T---ASAALASEYFSTKPY 421 (478)
Q Consensus 406 t---a~e~L~hp~f~~~~~ 421 (478)
- ++|+-.||||+...|
T Consensus 918 Gkng~d~vKaHpfFkgIDf 936 (1034)
T KOG0608|consen 918 GKNGADQVKAHPFFKGIDF 936 (1034)
T ss_pred cccchhhhhcCccccccch
Confidence 4 778999999997655
No 294
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.4e-41 Score=339.79 Aligned_cols=255 Identities=25% Similarity=0.398 Sum_probs=217.2
Q ss_pred eeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC--ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 132 FEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF--EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 132 y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
.+....||+|+|-+||+|.|..+|..||--.++...+ .+...+++..|+.+|+.|+|||||++++++.+.....+.+|
T Consensus 42 ~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~i 121 (632)
T KOG0584|consen 42 LKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFI 121 (632)
T ss_pred eehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeee
Confidence 3445789999999999999999999999766655444 45566889999999999999999999999988777789999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceeccCCCCcEEEecC-CcEEEeecccccccCCCCC
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRG--VLHRDIKGSNLLVNNE-GVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g--ivHrDlkp~NILl~~~-~~vkl~DFG~a~~~~~~~~ 286 (478)
.|++..|.|..++.....+....++.|++||+.||.|||++. |||||||.+||+|+.+ |.|||+|+|+|......
T Consensus 122 TEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s-- 199 (632)
T KOG0584|consen 122 TELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS-- 199 (632)
T ss_pred eecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcc--
Confidence 999999988888888888999999999999999999999984 9999999999999876 89999999999887653
Q ss_pred CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHcCCCCchhhccCCCCCc
Q 011763 287 QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQ-LHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 287 ~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~-~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
.....+|||.|||||++. ..|+..+||||||+.|+||+|+..||.......+ ++++.. |..|..+.
T Consensus 200 -~aksvIGTPEFMAPEmYE--E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~S--GiKP~sl~-------- 266 (632)
T KOG0584|consen 200 -HAKSVIGTPEFMAPEMYE--ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTS--GIKPAALS-------- 266 (632)
T ss_pred -ccceeccCccccChHHHh--hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHc--CCCHHHhh--------
Confidence 335589999999999886 5799999999999999999999999987665544 444433 33333221
Q ss_pred cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCC
Q 011763 366 TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK 419 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~ 419 (478)
+=-.+++++||.+||.. ...|+|+.|+|.||||...
T Consensus 267 -----------------kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 267 -----------------KVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred -----------------ccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 11257899999999998 9999999999999999875
No 295
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=7.2e-40 Score=319.83 Aligned_cols=257 Identities=32% Similarity=0.542 Sum_probs=212.1
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.+.|++.+.||+|+||.||++.+..++..|++|++..... ..+.+.+|+.+++.++|+||+++++.+.. ....|+
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~l 92 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLV--GDELWV 92 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEE--CCEEEE
Confidence 5579999999999999999999988899999999975532 45667789999999999999999999987 578999
Q ss_pred EEeeccCCchhhccCCCC-CCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDI-KFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
|+||+++..+..+..... .+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++....... .
T Consensus 93 v~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~-~ 171 (286)
T cd06614 93 VMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK-S 171 (286)
T ss_pred EEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccch-h
Confidence 999999765555544443 79999999999999999999999999999999999999999999999999986544321 1
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccc
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATL 367 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 367 (478)
......++..|+|||++.+ ..++.++|||||||++|+|++|+.||...+.......+... +.++
T Consensus 172 ~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~-------------- 235 (286)
T cd06614 172 KRNSVVGTPYWMAPEVIKR-KDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTK-GIPP-------------- 235 (286)
T ss_pred hhccccCCcccCCHhHhcC-CCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCCC--------------
Confidence 1223346788999998876 56899999999999999999999999877666555444321 0000
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
......++..+.+||.+||+.+|.+|||+.++|+|+||..
T Consensus 236 -----------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 275 (286)
T cd06614 236 -----------LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKK 275 (286)
T ss_pred -----------CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhc
Confidence 0001236788999999999999999999999999999987
No 296
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=5.5e-41 Score=356.86 Aligned_cols=260 Identities=30% Similarity=0.476 Sum_probs=206.0
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecC------
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRL------ 202 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------ 202 (478)
..+|+.+..||+||||.||+++++-+|+.||||+|.... .......+.+|+..|.+|+|||||+++..+.+..
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence 568999999999999999999999999999999998776 6677788999999999999999999865431100
Q ss_pred --------------------------------------------------------------------------------
Q 011763 203 -------------------------------------------------------------------------------- 202 (478)
Q Consensus 203 -------------------------------------------------------------------------------- 202 (478)
T Consensus 557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~ 636 (1351)
T KOG1035|consen 557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS 636 (1351)
T ss_pred cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence
Q ss_pred -----------------------C--------ceEEEEEeeccCCchhhccCCCCCC-CHHHHHHHHHHHHHHHHHHHhC
Q 011763 203 -----------------------S--------CSIYLVFEYMEHDITGLLSCPDIKF-SEAQIKCYMNQLLHGLEHCHSR 250 (478)
Q Consensus 203 -----------------------~--------~~~~lv~e~~~~~ll~~~~~~~~~l-~~~~~~~i~~qil~aL~~LH~~ 250 (478)
+ ..+||=||||+..++..+...+... ....++.+++||+.||.|+|++
T Consensus 637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~ 716 (1351)
T KOG1035|consen 637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQ 716 (1351)
T ss_pred CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhC
Confidence 0 1468899999999888888777555 5788999999999999999999
Q ss_pred CceeccCCCCcEEEecCCcEEEeecccccccC-----------------CCCCCCccccccCCcccCcccccCCC--CCC
Q 011763 251 GVLHRDIKGSNLLVNNEGVLKLADFGLANFSN-----------------TGHRQPLTSRVVTLWYRPPELLLGAT--DYG 311 (478)
Q Consensus 251 givHrDlkp~NILl~~~~~vkl~DFG~a~~~~-----------------~~~~~~~~~~~~t~~y~APE~l~~~~--~~~ 311 (478)
|||||||||.||+|++++.|||+|||+|+... .......+..+||.-|+|||++.+.. .|+
T Consensus 717 giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn 796 (1351)
T KOG1035|consen 717 GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYN 796 (1351)
T ss_pred ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccccc
Confidence 99999999999999999999999999997611 11223567789999999999998755 699
Q ss_pred ChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH-cCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHH
Q 011763 312 PSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKL-CGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAV 390 (478)
Q Consensus 312 ~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~ 390 (478)
.|+|+||||+||+||+. ||... .+.+..+..+ -|..|.+ ...+..--+.-.
T Consensus 797 ~KiDmYSLGIVlFEM~y---PF~Ts--MERa~iL~~LR~g~iP~~-----------------------~~f~~~~~~~e~ 848 (1351)
T KOG1035|consen 797 SKIDMYSLGIVLFEMLY---PFGTS--MERASILTNLRKGSIPEP-----------------------ADFFDPEHPEEA 848 (1351)
T ss_pred chhhhHHHHHHHHHHhc---cCCch--HHHHHHHHhcccCCCCCC-----------------------cccccccchHHH
Confidence 99999999999999994 46532 3332222211 1111110 011122234457
Q ss_pred HHHHHhcCCCCCCccCHHHHHhCcccC
Q 011763 391 NLIETLLSVEPYKRATASAALASEYFS 417 (478)
Q Consensus 391 ~Li~~mL~~dP~~R~ta~e~L~hp~f~ 417 (478)
.+|+.||+.||.+||||.|+|++.||-
T Consensus 849 slI~~Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 849 SLIRWLLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred HHHHHHhcCCCccCCCHHHHhhccCCC
Confidence 899999999999999999999999985
No 297
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=7e-40 Score=353.92 Aligned_cols=255 Identities=25% Similarity=0.340 Sum_probs=201.2
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
++|++.++||+|+||.||+|++..+++.||+|+++.+.. .....+.+.+|+.++..++||||+++++++.+ .+..|+
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d--~~~lyL 79 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSD--GDPVYY 79 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee--CCEEEE
Confidence 479999999999999999999999999999999975433 23445678899999999999999999999877 678999
Q ss_pred EEeeccCCchhhccCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeeccc
Q 011763 209 VFEYMEHDITGLLSCP-----------DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGL 277 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~-----------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~ 277 (478)
||||++++.+..+... ...++...+..++.||+.||+|||++||+||||||+|||++.++.++|+|||+
T Consensus 80 VMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGL 159 (932)
T PRK13184 80 TMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGA 159 (932)
T ss_pred EEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCc
Confidence 9999998665543321 12356677889999999999999999999999999999999999999999999
Q ss_pred ccccCCCC-----------------CCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHH
Q 011763 278 ANFSNTGH-----------------RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVE 340 (478)
Q Consensus 278 a~~~~~~~-----------------~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~ 340 (478)
+....... .......+||+.|+|||++.+ ..++.++|||||||++|||++|..||.......
T Consensus 160 Ak~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g-~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 160 AIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG-VPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred ceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC-CCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 97652110 011123468999999999876 678999999999999999999999998754433
Q ss_pred HHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 341 QLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 341 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
.... .....+. . ...+..+++.+.+++.+||..||++|++..+.|.+
T Consensus 239 i~~~--~~i~~P~-~-----------------------~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~ 285 (932)
T PRK13184 239 ISYR--DVILSPI-E-----------------------VAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQ 285 (932)
T ss_pred hhhh--hhccChh-h-----------------------ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 2211 1111110 0 00123678899999999999999999987776654
No 298
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-40 Score=299.21 Aligned_cols=261 Identities=26% Similarity=0.392 Sum_probs=201.2
Q ss_pred cccccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeec---C
Q 011763 126 PLRADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSR---L 202 (478)
Q Consensus 126 ~~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~---~ 202 (478)
-+..++|.+.+.||+|||+-||+++...++..||+|++.... .+..+..++|++..++++||||++++++.... .
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~ 94 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDG 94 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccC
Confidence 344679999999999999999999999999999999997654 56678888999999999999999998876422 3
Q ss_pred CceEEEEEeeccCC-chhhcc---CCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceeccCCCCcEEEecCCcEEEeecc
Q 011763 203 SCSIYLVFEYMEHD-ITGLLS---CPDIKFSEAQIKCYMNQLLHGLEHCHSRG--VLHRDIKGSNLLVNNEGVLKLADFG 276 (478)
Q Consensus 203 ~~~~~lv~e~~~~~-ll~~~~---~~~~~l~~~~~~~i~~qil~aL~~LH~~g--ivHrDlkp~NILl~~~~~vkl~DFG 276 (478)
....||+++|...+ +++.+. ..+..+++.++..|+.+|++||.+||+.. ++||||||.|||+.+++.++|.|||
T Consensus 95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEecc
Confidence 45689999999865 554443 24457999999999999999999999998 9999999999999999999999999
Q ss_pred cccccCCCCC--------CCccccccCCcccCcccccC--CCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 011763 277 LANFSNTGHR--------QPLTSRVVTLWYRPPELLLG--ATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIF 346 (478)
Q Consensus 277 ~a~~~~~~~~--------~~~~~~~~t~~y~APE~l~~--~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~ 346 (478)
.++...-.-. +.-.....|..|+|||.+.- ....+.++|||||||+||.|+.|..||... +
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~---------~ 245 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERI---------Y 245 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHH---------h
Confidence 9875432110 00111234888999998743 234688999999999999999999999632 1
Q ss_pred HHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 347 KLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 347 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
+.-|....... .+....|. -..+++.+.+||+.||+.||.+||++.++|.+
T Consensus 246 ~~GgSlaLAv~------n~q~s~P~----------~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 246 QQGGSLALAVQ------NAQISIPN----------SSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred hcCCeEEEeee------ccccccCC----------CCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 11111110000 00000000 02478999999999999999999999999864
No 299
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.3e-39 Score=314.06 Aligned_cols=248 Identities=23% Similarity=0.328 Sum_probs=198.5
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|++.++||+|+||.||++++..+ ..||+|++...... .+.+.+|+.+++.++|+||+++++++.. ...|+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~---~~~~l 77 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE---EPIYI 77 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccC---HHHHHHHHHHHHhCCCCCcceEEEEECC---CCcEE
Confidence 45799999999999999999988655 46999998754332 3457789999999999999999887643 45799
Q ss_pred EEeeccCCchhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 209 VFEYMEHDITGLLSC--PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 209 v~e~~~~~ll~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
||||++++.+..+.. ....+++..+..++.||+.||.|||+++|+|+||||+||++++++.++|+|||.+........
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~ 157 (262)
T cd05071 78 VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 157 (262)
T ss_pred EEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccc
Confidence 999999755544433 234578999999999999999999999999999999999999999999999999976543322
Q ss_pred CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 287 QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 287 ~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
.......++..|+|||++.+ ..++.++|||||||++|+|++ |.+||......+....+..... .+
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~-~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~-~~------------ 223 (262)
T cd05071 158 TARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR-MP------------ 223 (262)
T ss_pred ccccCCcccceecCHhHhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCC-CC------------
Confidence 22223345678999998875 668999999999999999999 8899988776666555432110 00
Q ss_pred cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 366 TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
....++..+.+||.+||+.||++||++.++++
T Consensus 224 ---------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 224 ---------------CPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred ---------------CccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 01256788999999999999999999999874
No 300
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.1e-39 Score=313.60 Aligned_cols=244 Identities=21% Similarity=0.285 Sum_probs=197.6
Q ss_pred eeeecCceEEEEEEE--CCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeecc
Q 011763 137 KIGQGTYSSVFRARD--LDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYME 214 (478)
Q Consensus 137 ~LG~G~~g~V~~~~~--~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~ 214 (478)
.||+|+||.||+|.+ ..++..||+|+++.........+.+.+|+.+++.++||||+++++++.. ...++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~lv~e~~~ 78 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA---ESWMLVMELAE 78 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC---CCcEEEEecCC
Confidence 589999999999964 4567899999997665555666778899999999999999999998753 45789999999
Q ss_pred CCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC--Ccccc
Q 011763 215 HDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ--PLTSR 292 (478)
Q Consensus 215 ~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~--~~~~~ 292 (478)
++.+..+......+++..+..++.||+.||.|||++||+|+||||.|||++.++.+||+|||++......... .....
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05116 79 LGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHG 158 (257)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCC
Confidence 8766655555567999999999999999999999999999999999999999999999999999765432211 11122
Q ss_pred ccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCC
Q 011763 293 VVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQ 371 (478)
Q Consensus 293 ~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 371 (478)
.++..|+|||.+.. ..++.++|||||||++|||++ |.+||...+..+....+..... ++
T Consensus 159 ~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~-~~------------------ 218 (257)
T cd05116 159 KWPVKWYAPECMNY-YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER-ME------------------ 218 (257)
T ss_pred CCCccccCHhHhcc-CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC-CC------------------
Confidence 33578999998865 668889999999999999998 9999988777666555432110 00
Q ss_pred CCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 372 QPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 372 ~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
....+++++.+||.+||+.||++||++.++..
T Consensus 219 ---------~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 219 ---------CPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred ---------CCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 01257889999999999999999999998864
No 301
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.6e-40 Score=320.61 Aligned_cols=253 Identities=21% Similarity=0.324 Sum_probs=202.7
Q ss_pred ccceeeeeeeeecCceEEEEEEECC-----CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLD-----TGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS 203 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~-----~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 203 (478)
..+|++.+.||+|+||.||+|.+.. .++.||||+++... .....+.+.+|+.++..++||||+++++++.. .
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~--~ 80 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTK--E 80 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--C
Confidence 5679999999999999999998754 35789999997543 33445667889999999999999999999877 5
Q ss_pred ceEEEEEeeccCCchhhccC----------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecC
Q 011763 204 CSIYLVFEYMEHDITGLLSC----------------PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE 267 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~----------------~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~ 267 (478)
...++++||+.++.+..+.. ....+++..+..++.||+.||.|||++||+||||||+|||++++
T Consensus 81 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~ 160 (283)
T cd05091 81 QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDK 160 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCC
Confidence 66899999998765443321 12357889999999999999999999999999999999999999
Q ss_pred CcEEEeecccccccCCCCC-CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 011763 268 GVLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKI 345 (478)
Q Consensus 268 ~~vkl~DFG~a~~~~~~~~-~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i 345 (478)
+.+||+|||+++....... .......+++.|+|||++.+ ..++.++|||||||++|||++ |.+||.+....+.+..+
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i 239 (283)
T cd05091 161 LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMI 239 (283)
T ss_pred CceEecccccccccccchheeeccCccCCccccCHHHHhc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 9999999999875533221 11223344778999999876 568999999999999999998 88999888777666665
Q ss_pred HHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 346 FKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 346 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
......+ ....++..+.+||.+||+.||.+||++.+++..
T Consensus 240 ~~~~~~~----------------------------~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 240 RNRQVLP----------------------------CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred HcCCcCC----------------------------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 4321100 013578889999999999999999999999853
No 302
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.1e-39 Score=333.02 Aligned_cols=256 Identities=20% Similarity=0.266 Sum_probs=199.0
Q ss_pred cccccceeeeeeeeecCceEEEEEEECCC-----CcEEEEEEeecCCCChHHHHHHHHHHHHHHhcC-CCCeeeecceee
Q 011763 126 PLRADAFEKLEKIGQGTYSSVFRARDLDT-----GKIVALKKVRFDNFEPESVRFMAREILILRRLD-HPNIIKLEGLIT 199 (478)
Q Consensus 126 ~~~~~~y~~~~~LG~G~~g~V~~~~~~~~-----~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~ 199 (478)
....++|.+.+.||+|+||.||+|.+... +..||||++.... .....+.+.+|+.+|.++. ||||+++++++.
T Consensus 33 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~ 111 (400)
T cd05105 33 EFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLGACT 111 (400)
T ss_pred eccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc
Confidence 34467899999999999999999986432 3479999997543 3444567889999999996 999999999997
Q ss_pred ecCCceEEEEEeeccCCchhhccCC-------------------------------------------------------
Q 011763 200 SRLSCSIYLVFEYMEHDITGLLSCP------------------------------------------------------- 224 (478)
Q Consensus 200 ~~~~~~~~lv~e~~~~~ll~~~~~~------------------------------------------------------- 224 (478)
. ...+||||||++++.+..+...
T Consensus 112 ~--~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (400)
T cd05105 112 K--SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYV 189 (400)
T ss_pred c--CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccc
Confidence 6 6779999999987654332110
Q ss_pred -----------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEE
Q 011763 225 -----------------------------------------DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLL 263 (478)
Q Consensus 225 -----------------------------------------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NIL 263 (478)
...+++..+..++.||+.||.|||+++|+|+||||+|||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nil 269 (400)
T cd05105 190 PMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEE
Confidence 124788889999999999999999999999999999999
Q ss_pred EecCCcEEEeecccccccCCCCC-CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 011763 264 VNNEGVLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQ 341 (478)
Q Consensus 264 l~~~~~vkl~DFG~a~~~~~~~~-~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~ 341 (478)
++.++.+||+|||+++....... .......++..|+|||++.+ ..++.++|||||||++|+|++ |..||........
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~ 348 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFD-NLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST 348 (400)
T ss_pred EeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH
Confidence 99999999999999976533211 11223345778999999876 678999999999999999997 9999987554333
Q ss_pred HHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 342 LHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 342 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
+...+.....++ ....++.++.+||.+||+.||++|||+.++.+
T Consensus 349 ~~~~~~~~~~~~---------------------------~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 349 FYNKIKSGYRMA---------------------------KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred HHHHHhcCCCCC---------------------------CCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 332222110000 01256788999999999999999999988875
No 303
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-41 Score=332.96 Aligned_cols=267 Identities=23% Similarity=0.344 Sum_probs=235.0
Q ss_pred CcccccccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeec
Q 011763 123 GWVPLRADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSR 201 (478)
Q Consensus 123 ~~~~~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 201 (478)
.+..+...+++++..||-|+||.|=++........+|+|++++... +..+.+.+..|-+||..++.|+||++|..|.+
T Consensus 413 e~a~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd- 491 (732)
T KOG0614|consen 413 EFAQVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRD- 491 (732)
T ss_pred hhcccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhcc-
Confidence 4445667889999999999999999998766555699999986544 56667888899999999999999999999987
Q ss_pred CCceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeeccccccc
Q 011763 202 LSCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFS 281 (478)
Q Consensus 202 ~~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~ 281 (478)
..++||+||-|-|+.+..+.+..+.|.+..++.|+..+++|++|||.+|||+|||||+|+||+.+|-+||.|||+|+..
T Consensus 492 -~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki 570 (732)
T KOG0614|consen 492 -SKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKI 570 (732)
T ss_pred -chhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHh
Confidence 7899999999999888888888889999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCC
Q 011763 282 NTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK 361 (478)
Q Consensus 282 ~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 361 (478)
..+. ...+++|||.|.|||++++ +..+.++|.|+||+++|||++|.|||.+.+...++..|...+...
T Consensus 571 ~~g~--KTwTFcGTpEYVAPEIILn-KGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i--------- 638 (732)
T KOG0614|consen 571 GSGR--KTWTFCGTPEYVAPEIILN-KGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI--------- 638 (732)
T ss_pred ccCC--ceeeecCCcccccchhhhc-cCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh---------
Confidence 7653 3467899999999999997 678999999999999999999999999999999999988754221
Q ss_pred CCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccC-----HHHHHhCcccCCCCC
Q 011763 362 LPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT-----ASAALASEYFSTKPY 421 (478)
Q Consensus 362 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t-----a~e~L~hp~f~~~~~ 421 (478)
+....++..+.+||+++...+|.+|.- +.++-+|.||..-.|
T Consensus 639 ------------------~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdw 685 (732)
T KOG0614|consen 639 ------------------EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDW 685 (732)
T ss_pred ------------------hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCCh
Confidence 111367888999999999999999986 899999999986554
No 304
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.9e-39 Score=314.96 Aligned_cols=254 Identities=17% Similarity=0.265 Sum_probs=202.2
Q ss_pred ccccceeeeeeeeecCceEEEEEEECCC-----CcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeec
Q 011763 127 LRADAFEKLEKIGQGTYSSVFRARDLDT-----GKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSR 201 (478)
Q Consensus 127 ~~~~~y~~~~~LG~G~~g~V~~~~~~~~-----~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 201 (478)
+..++|++.+.||+|+||.||++.+... +..||+|.+.... .......+.+|+.+|..++|+||+++++++..
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~- 80 (277)
T cd05032 3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVST- 80 (277)
T ss_pred cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC-
Confidence 3467899999999999999999987643 4789999986443 33444567789999999999999999999877
Q ss_pred CCceEEEEEeeccCCchhhccCC----------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEE
Q 011763 202 LSCSIYLVFEYMEHDITGLLSCP----------DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLK 271 (478)
Q Consensus 202 ~~~~~~lv~e~~~~~ll~~~~~~----------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vk 271 (478)
....|+||||++++.+..+... ...+++..+..++.||+.||.|||+++|+|+||||+|||++.++.+|
T Consensus 81 -~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~k 159 (277)
T cd05032 81 -GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVK 159 (277)
T ss_pred -CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEE
Confidence 5779999999987555443321 22478889999999999999999999999999999999999999999
Q ss_pred EeecccccccCCCCC-CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHc
Q 011763 272 LADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLC 349 (478)
Q Consensus 272 l~DFG~a~~~~~~~~-~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~ 349 (478)
|+|||+++....... .......++..|+|||.+.+ ..++.++|||||||++|+|++ |.+||...+..+....+.. .
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-~ 237 (277)
T cd05032 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD-GVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVID-G 237 (277)
T ss_pred ECCcccchhhccCcccccCCCCCccccccCHHHHhc-CCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhc-C
Confidence 999999875543211 12223345778999998875 568999999999999999998 9999988776665554431 1
Q ss_pred CCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 350 GSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 350 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
..++ ....++..+.+||.+||+.+|.+|||+.++++
T Consensus 238 ~~~~---------------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 238 GHLD---------------------------LPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred CCCC---------------------------CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 1100 01235788999999999999999999999985
No 305
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.2e-39 Score=319.24 Aligned_cols=255 Identities=24% Similarity=0.371 Sum_probs=202.9
Q ss_pred ccccceeeeeeeeecCceEEEEEEECCC-----CcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeee
Q 011763 127 LRADAFEKLEKIGQGTYSSVFRARDLDT-----GKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITS 200 (478)
Q Consensus 127 ~~~~~y~~~~~LG~G~~g~V~~~~~~~~-----~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 200 (478)
+..++|++.+.||+|+||.||++.+... ...+|+|.+.... .......+.+|+.++.++ +|+||+++++++..
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 87 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ 87 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence 3467899999999999999999987643 3789999987543 334456678899999999 89999999999876
Q ss_pred cCCceEEEEEeeccCCchhhcc----------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEE
Q 011763 201 RLSCSIYLVFEYMEHDITGLLS----------------CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLV 264 (478)
Q Consensus 201 ~~~~~~~lv~e~~~~~ll~~~~----------------~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl 264 (478)
...+++||||+.++.+..+. .....+++..+..++.||+.||.|||+++|+|+||||+|||+
T Consensus 88 --~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~ 165 (293)
T cd05053 88 --EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV 165 (293)
T ss_pred --CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE
Confidence 56799999999876554443 223568999999999999999999999999999999999999
Q ss_pred ecCCcEEEeecccccccCCCCC-CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 011763 265 NNEGVLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQL 342 (478)
Q Consensus 265 ~~~~~vkl~DFG~a~~~~~~~~-~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~ 342 (478)
++++.+||+|||+++....... .......++..|+|||++.+ ..++.++|||||||++|+|++ |..||......+..
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~ 244 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF 244 (293)
T ss_pred cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhcc-CCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHH
Confidence 9999999999999976543211 11122233567999998876 678999999999999999997 99999887766555
Q ss_pred HHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 343 HKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 343 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
..+..... + ......+..+.+||.+||..||.+|||+.++|++
T Consensus 245 ~~~~~~~~--~--------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 245 KLLKEGYR--M--------------------------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHHHcCCc--C--------------------------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 44432110 0 0012457889999999999999999999999965
No 306
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=7.7e-40 Score=314.91 Aligned_cols=249 Identities=22% Similarity=0.314 Sum_probs=204.7
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
..+|+++++||.|+||.||+|.+.. +..+|+|++.... ......+.+|+.+++.++|+||+++++++.. ....++
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~l 79 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD--LLKQQDFQKEVQALKRLRHKHLISLFAVCSV--GEPVYI 79 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc--hhhHHHHHHHHHHHhcCCCcchhheeeeEec--CCCeEE
Confidence 4579999999999999999999877 8899999987543 2334567889999999999999999998877 567899
Q ss_pred EEeeccCCchhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 209 VFEYMEHDITGLLSC--PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 209 v~e~~~~~ll~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
||||++++.+..+.. ....+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++........
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~ 159 (261)
T cd05148 80 ITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY 159 (261)
T ss_pred EEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence 999999855544433 334689999999999999999999999999999999999999999999999999976543221
Q ss_pred CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 287 QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 287 ~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
. .....++..|+|||++.+ ..++.++|||||||++|+|++ |+.||...+..+.+..+......+
T Consensus 160 ~-~~~~~~~~~~~~PE~~~~-~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~------------- 224 (261)
T cd05148 160 L-SSDKKIPYKWTAPEAASH-GTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMP------------- 224 (261)
T ss_pred c-ccCCCCceEecCHHHHcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCC-------------
Confidence 1 123344678999998876 678899999999999999998 899999888777666654321110
Q ss_pred cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 366 TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
....+++.+.++|.+||+.||.+|||+.++++
T Consensus 225 ---------------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 225 ---------------CPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred ---------------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 01356788999999999999999999999874
No 307
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.6e-39 Score=312.86 Aligned_cols=247 Identities=22% Similarity=0.339 Sum_probs=198.6
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|+++++||+|+||.||++.+. .+..||+|.+...... .+.+.+|+.++++++|+||+++++++.. ...|+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~---~~~~l 77 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVSE---EPIYI 77 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEECC---CCcEE
Confidence 468999999999999999999865 5667999998765433 2457889999999999999999987743 45789
Q ss_pred EEeeccCCchhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 209 VFEYMEHDITGLLSC--PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 209 v~e~~~~~ll~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
+|||+.++.+..+.. ....+++..++.++.||+.||.|||+++|+|+||||+||++++++.++|+|||++........
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05070 78 VTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCccc
Confidence 999998765544432 234589999999999999999999999999999999999999999999999999976543221
Q ss_pred CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 287 QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 287 ~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
.......++..|+|||++.+ ..++.++|||||||++|+|++ |.+||...+..+....+.... .++
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~~------------ 223 (260)
T cd05070 158 TARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY-RMP------------ 223 (260)
T ss_pred ccccCCCCCccccChHHHhc-CCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-CCC------------
Confidence 11122234567999998875 668899999999999999999 899998877766665553211 000
Q ss_pred cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHH
Q 011763 366 TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAAL 411 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L 411 (478)
.....+..+.+||.+||..||++|||+.+++
T Consensus 224 ---------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~ 254 (260)
T cd05070 224 ---------------CPQDCPISLHELMLQCWKKDPEERPTFEYLQ 254 (260)
T ss_pred ---------------CCCcCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence 0135678899999999999999999999987
No 308
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.1e-39 Score=311.89 Aligned_cols=250 Identities=22% Similarity=0.326 Sum_probs=202.7
Q ss_pred cccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEE
Q 011763 128 RADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 128 ~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
..++|++.+.||.|+||+||++.+. .++.||||.+...... ...+.+|+.+++.++|+||+++++++.. ....+
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~ 77 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMS---PEAFLQEAQIMKKLRHDKLVQLYAVCSE--EEPIY 77 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccC---HHHHHHHHHHHhhCCCCCEeeeeeeeec--CCceE
Confidence 4678999999999999999999975 4577999998755432 3567789999999999999999998876 56789
Q ss_pred EEEeeccCCchhhcc-CC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC
Q 011763 208 LVFEYMEHDITGLLS-CP-DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH 285 (478)
Q Consensus 208 lv~e~~~~~ll~~~~-~~-~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~ 285 (478)
+||||++++.+..+. .. ...+++..+..++.||+.||.|||+++++|+||||+||++++++.++|+|||++.......
T Consensus 78 ~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (261)
T cd05034 78 IVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDE 157 (261)
T ss_pred EEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchh
Confidence 999999876554443 32 2468999999999999999999999999999999999999999999999999987654322
Q ss_pred CCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 286 RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 286 ~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
.........+..|+|||.+.+ ..++.++|||||||++|+|++ |+.||.+.+....+..+......+.
T Consensus 158 ~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~----------- 225 (261)
T cd05034 158 YTAREGAKFPIKWTAPEAANY-GRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPR----------- 225 (261)
T ss_pred hhhhhccCCCccccCHHHhcc-CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-----------
Confidence 111122233567999998876 668999999999999999998 9999998877776666543211110
Q ss_pred ccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 365 ATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 365 ~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
....+.++.++|.+||..||++||++.++++
T Consensus 226 -----------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 226 -----------------PPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred -----------------CCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 1245788999999999999999999999873
No 309
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=7.4e-40 Score=322.83 Aligned_cols=253 Identities=25% Similarity=0.338 Sum_probs=198.5
Q ss_pred ccccceeeeeeeeecCceEEEEEEECCCCcE--EEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCC
Q 011763 127 LRADAFEKLEKIGQGTYSSVFRARDLDTGKI--VALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSRLS 203 (478)
Q Consensus 127 ~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~--vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~ 203 (478)
+..++|++.+.||+|+||.||+|.+..++.. +|+|.+... ........+.+|+.++.++ +|+||+++++++.. .
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~--~ 80 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH--R 80 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc-CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC--C
Confidence 3467899999999999999999998777754 577766532 2344556778899999999 89999999999877 5
Q ss_pred ceEEEEEeeccCCchhhccCC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecC
Q 011763 204 CSIYLVFEYMEHDITGLLSCP----------------DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE 267 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~----------------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~ 267 (478)
..+|+||||++++.+..+... ...+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~ 160 (303)
T cd05088 81 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN 160 (303)
T ss_pred CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCC
Confidence 679999999987554443321 2357899999999999999999999999999999999999999
Q ss_pred CcEEEeecccccccCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 011763 268 GVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIF 346 (478)
Q Consensus 268 ~~vkl~DFG~a~~~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~ 346 (478)
+.+||+|||++....... .......+..|+|||++.+ ..++.++|||||||++|+|++ |.+||...+..+....+.
T Consensus 161 ~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~ 237 (303)
T cd05088 161 YVAKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 237 (303)
T ss_pred CcEEeCccccCcccchhh--hcccCCCcccccCHHHHhc-cCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHh
Confidence 999999999986432111 1111223567999998865 568899999999999999998 999998777665544432
Q ss_pred HHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 347 KLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 347 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
... .+ .....+++++.+||.+||+.||++||++.++|.+
T Consensus 238 ~~~--~~--------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 238 QGY--RL--------------------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred cCC--cC--------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 100 00 0012467889999999999999999999999975
No 310
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.1e-39 Score=315.47 Aligned_cols=252 Identities=18% Similarity=0.302 Sum_probs=199.8
Q ss_pred cccceeeeeeeeecCceEEEEEEECCCCc----EEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC
Q 011763 128 RADAFEKLEKIGQGTYSSVFRARDLDTGK----IVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS 203 (478)
Q Consensus 128 ~~~~y~~~~~LG~G~~g~V~~~~~~~~~~----~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 203 (478)
..++|+++++||.|+||+||+|++..++. .||+|++.... .......+.+|+.++..++|+||+++++++..
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--- 80 (279)
T cd05109 5 KETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT-SPKANKEILDEAYVMAGVGSPYVCRLLGICLT--- 80 (279)
T ss_pred chhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC-CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC---
Confidence 35689999999999999999998776665 48999987543 34455678889999999999999999998865
Q ss_pred ceEEEEEeeccCCch-hhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccC
Q 011763 204 CSIYLVFEYMEHDIT-GLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSN 282 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll-~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~ 282 (478)
...++++||++++.+ ..+......+++..+..++.||+.||.|||+++|+||||||+|||+++++.+||+|||+++...
T Consensus 81 ~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 81 STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecc
Confidence 346799999987544 4444445578999999999999999999999999999999999999999999999999997664
Q ss_pred CCCCC-CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccC
Q 011763 283 TGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKS 360 (478)
Q Consensus 283 ~~~~~-~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 360 (478)
..... ......+++.|+|||++.+ ..++.++|||||||++|||++ |.+||...........+ .....++.
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~~------ 232 (279)
T cd05109 161 IDETEYHADGGKVPIKWMALESILH-RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLL-EKGERLPQ------ 232 (279)
T ss_pred cccceeecCCCccchhhCCHHHhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-HCCCcCCC------
Confidence 32211 1112234677999999876 568999999999999999998 99999876654443322 21111110
Q ss_pred CCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 361 KLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 361 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
....+.++.++|.+||..||++||++.+++.
T Consensus 233 ---------------------~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 233 ---------------------PPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred ---------------------CccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 1246778999999999999999999999984
No 311
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.4e-39 Score=319.05 Aligned_cols=259 Identities=20% Similarity=0.277 Sum_probs=203.6
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCC----------------cEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCee
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTG----------------KIVALKKVRFDNFEPESVRFMAREILILRRLDHPNII 192 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~----------------~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv 192 (478)
..+|++++.||+|+||.||++.+...+ ..||+|++.... .....+.+.+|+.+++.++||||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhcCCCCEe
Confidence 458999999999999999999876543 568999987553 345567788999999999999999
Q ss_pred eecceeeecCCceEEEEEeeccCCchhhccCCCC-----------CCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCc
Q 011763 193 KLEGLITSRLSCSIYLVFEYMEHDITGLLSCPDI-----------KFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSN 261 (478)
Q Consensus 193 ~l~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~-----------~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~N 261 (478)
++++++.. ....+++|||+.++.+..+..... .+++..++.++.||+.||.|||+++|+|+||||+|
T Consensus 83 ~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~N 160 (296)
T cd05051 83 RLLGVCTV--DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRN 160 (296)
T ss_pred EEEEEEec--CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhc
Confidence 99999877 567899999998765554433322 68999999999999999999999999999999999
Q ss_pred EEEecCCcEEEeecccccccCCCCC-CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh--CCCCCCCCCh
Q 011763 262 LLVNNEGVLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI--GKPILQGRTE 338 (478)
Q Consensus 262 ILl~~~~~vkl~DFG~a~~~~~~~~-~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt--G~~pf~~~~~ 338 (478)
|+++.++.++|+|||++........ .......+++.|+|||++.+ ..++.++|||||||++|+|++ +..||...+.
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLL-GKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD 239 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhc-CCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh
Confidence 9999999999999999875433221 11223345778999998876 568999999999999999998 7789987776
Q ss_pred HHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 339 VEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 339 ~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
.+.+..+.......... ........++.++.+||.+||+.||.+|||+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 240 QQVIENAGHFFRDDGRQ---------------------IYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred HHHHHHHHhcccccccc---------------------ccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 66655554321110000 000011246788999999999999999999999964
No 312
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.5e-39 Score=313.89 Aligned_cols=252 Identities=30% Similarity=0.458 Sum_probs=201.9
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
++|++.+.||.|+||.||++++..++..||||.+..... .......+.+|+.+++.++|+||+++++++.. ....++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~~ 79 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE--DNELNI 79 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEe--CCeEEE
Confidence 479999999999999999999988999999998865332 33445677889999999999999999999987 668999
Q ss_pred EEeeccCCchhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 209 VFEYMEHDITGLLSC----PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 209 v~e~~~~~ll~~~~~----~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
+|||++++.+..+.. ....+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd08229 80 VLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred EEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccC
Confidence 999999865544322 3456899999999999999999999999999999999999999999999999998765432
Q ss_pred CCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHcCCCCchhhccCCC
Q 011763 285 HRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEV--EQLHKIFKLCGSPPDDYWKKSKL 362 (478)
Q Consensus 285 ~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~--~~~~~i~~~~g~~~~~~~~~~~~ 362 (478)
. .......++..|+|||++.+ ..++.++||||||+++|+|++|..||.+.... +....+.. ...++.
T Consensus 160 ~-~~~~~~~~~~~~~ape~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~-------- 228 (267)
T cd08229 160 T-TAAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQ-CDYPPL-------- 228 (267)
T ss_pred C-cccccccCCcCccCHHHhcC-CCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhc-CCCCCC--------
Confidence 2 12233467889999999876 56889999999999999999999999765432 22222211 110000
Q ss_pred CCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 363 PHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
....++..+.+||.+||..||++|||+.++++
T Consensus 229 ------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 229 ------------------PSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred ------------------CcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 01246788999999999999999999998764
No 313
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=4.7e-39 Score=310.19 Aligned_cols=252 Identities=31% Similarity=0.458 Sum_probs=202.0
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
++|++.+.||+|+||.||+|.+..+++.||+|.++.... .....+.+.+|+.++++++|+||+++++++.. ....++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~--~~~~~l 79 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIE--NNELNI 79 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeec--CCeEEE
Confidence 479999999999999999999998999999999875332 34446778899999999999999999999987 567899
Q ss_pred EEeeccCCchhhcc----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 209 VFEYMEHDITGLLS----CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 209 v~e~~~~~ll~~~~----~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
||||++++.+..+. .....+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++......
T Consensus 80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 159 (267)
T cd08224 80 VLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred EEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCC
Confidence 99999975554332 23456899999999999999999999999999999999999999999999999998755432
Q ss_pred CCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHcCCCCchhhccCCC
Q 011763 285 HRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTE--VEQLHKIFKLCGSPPDDYWKKSKL 362 (478)
Q Consensus 285 ~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~--~~~~~~i~~~~g~~~~~~~~~~~~ 362 (478)
. .......+++.|+|||++.+ ..++.++|||||||++|+|++|+.||..... .+....+......+
T Consensus 160 ~-~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------- 227 (267)
T cd08224 160 T-TAAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPP---------- 227 (267)
T ss_pred C-cccceecCCccccCHHHhcc-CCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCC----------
Confidence 2 12233457888999999876 6688999999999999999999999965432 12222221100000
Q ss_pred CCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 363 PHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
.+ ...++..+.++|.+||..+|++|||+.++++
T Consensus 228 ---------~~--------~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 228 ---------LP--------ADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred ---------CC--------hhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 00 1246778999999999999999999999874
No 314
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.9e-39 Score=318.83 Aligned_cols=250 Identities=23% Similarity=0.295 Sum_probs=197.6
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCc--EEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCceE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGK--IVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSCSI 206 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~--~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~ 206 (478)
++|++.+.||+|+||.||+|++..++. .+++|.++... .....+.+.+|+.++.++ +||||+++++++.. ...+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~--~~~~ 78 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA-SENDHRDFAGELEVLCKLGHHPNIINLLGACEN--RGYL 78 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC-CHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc--CCcc
Confidence 479999999999999999999877664 46888876322 334456678899999999 79999999998876 5678
Q ss_pred EEEEeeccCCchhhccCC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcE
Q 011763 207 YLVFEYMEHDITGLLSCP----------------DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVL 270 (478)
Q Consensus 207 ~lv~e~~~~~ll~~~~~~----------------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~v 270 (478)
|+||||++++.+..+... ...+++..++.++.||+.||+|||++||+||||||+|||+++++.+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 79 YIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred eEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeE
Confidence 999999987555433321 1258899999999999999999999999999999999999999999
Q ss_pred EEeecccccccCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHc
Q 011763 271 KLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLC 349 (478)
Q Consensus 271 kl~DFG~a~~~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~ 349 (478)
||+|||++....... .......+..|+|||++.+ ..++.++|||||||++|+|++ |..||...+..+....+....
T Consensus 159 kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~ 235 (297)
T cd05089 159 KIADFGLSRGEEVYV--KKTMGRLPVRWMAIESLNY-SVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY 235 (297)
T ss_pred EECCcCCCcccccee--ccCCCCcCccccCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC
Confidence 999999986432211 1111122457999998876 668999999999999999997 999998877766555543211
Q ss_pred CCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 350 GSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 350 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
.. .....++..+.+||.+||..||.+|||++++++.
T Consensus 236 ~~----------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 236 RM----------------------------EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred CC----------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00 0012577889999999999999999999999754
No 315
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.8e-39 Score=318.66 Aligned_cols=255 Identities=20% Similarity=0.295 Sum_probs=201.6
Q ss_pred ccccceeeeeeeeecCceEEEEEEE-----CCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeee
Q 011763 127 LRADAFEKLEKIGQGTYSSVFRARD-----LDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITS 200 (478)
Q Consensus 127 ~~~~~y~~~~~LG~G~~g~V~~~~~-----~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 200 (478)
+..++|.+.+.||+|+||.||++.+ ..++..||+|+++... .....+.+.+|+.+++++ +||||+++++++..
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 110 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA-HSSEREALMSELKIMSHLGNHENIVNLLGACTI 110 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC-ChHHHHHHHHHHHHHHhccCCCCcceEEEEEec
Confidence 3356899999999999999999975 2345689999987543 234456788899999999 79999999999877
Q ss_pred cCCceEEEEEeeccCCchhhcc-CC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccc
Q 011763 201 RLSCSIYLVFEYMEHDITGLLS-CP-DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLA 278 (478)
Q Consensus 201 ~~~~~~~lv~e~~~~~ll~~~~-~~-~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a 278 (478)
....|+||||+.++.+..+. .. ...+++..+..++.||+.||.|||+++|+|+||||+|||++.++.++|+|||++
T Consensus 111 --~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 111 --GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred --CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCccc
Confidence 56799999999976554443 22 234899999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCC-CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchh
Q 011763 279 NFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDY 356 (478)
Q Consensus 279 ~~~~~~~~~-~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~ 356 (478)
......... ......++..|+|||++.+ ..++.++|||||||++|+|++ |.+||......+.+.........++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~--- 264 (302)
T cd05055 189 RDIMNDSNYVVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMA--- 264 (302)
T ss_pred ccccCCCceeecCCCCcccccCCHhhhcc-CCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCC---
Confidence 755432211 1122344678999999876 568999999999999999998 9999988776555444432110000
Q ss_pred hccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 357 WKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
.....++.+.+||.+||..||++|||+.+++.
T Consensus 265 ------------------------~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 265 ------------------------QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred ------------------------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 01246788999999999999999999999985
No 316
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-40 Score=306.08 Aligned_cols=264 Identities=23% Similarity=0.416 Sum_probs=220.5
Q ss_pred cccccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCC
Q 011763 126 PLRADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRL-DHPNIIKLEGLITSRLS 203 (478)
Q Consensus 126 ~~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~ 203 (478)
.+..++|.+++.||+|+|.+|.+++.+.+.+.||+|+++++-. +.+.......|-.+...- +||++|-|+..|+. +
T Consensus 246 ~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqt--e 323 (593)
T KOG0695|consen 246 GLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQT--E 323 (593)
T ss_pred ccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcc--c
Confidence 3457899999999999999999999999999999999987655 345566777888888766 89999999999987 6
Q ss_pred ceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCC
Q 011763 204 CSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNT 283 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~ 283 (478)
..+++|.||++|+.+....+...+|+++.++.|..+|+.||.|||++|||+||||..||||+..|++||+|+|+++..-.
T Consensus 324 srlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~ 403 (593)
T KOG0695|consen 324 SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG 403 (593)
T ss_pred ceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCC
Confidence 78999999999988888778888999999999999999999999999999999999999999999999999999975433
Q ss_pred CCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCC-------CChHHHHHHHH-HHcCCCCch
Q 011763 284 GHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQG-------RTEVEQLHKIF-KLCGSPPDD 355 (478)
Q Consensus 284 ~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~-------~~~~~~~~~i~-~~~g~~~~~ 355 (478)
. .....+.+|||.|+|||++.+ ..|+..+|+|+||++|+||+.|+.||.- .+..+.+.+++ +.--
T Consensus 404 ~-gd~tstfcgtpnyiapeilrg-eeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi----- 476 (593)
T KOG0695|consen 404 P-GDTTSTFCGTPNYIAPEILRG-EEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI----- 476 (593)
T ss_pred C-CcccccccCCCcccchhhhcc-cccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc-----
Confidence 2 234467899999999999987 7899999999999999999999999952 12233333332 1100
Q ss_pred hhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccC------HHHHHhCcccCCCCCC
Q 011763 356 YWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT------ASAALASEYFSTKPYA 422 (478)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t------a~e~L~hp~f~~~~~~ 422 (478)
.....++-.+..+++..|++||.+|.. ..++-.|+||....|.
T Consensus 477 ------------------------riprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd 525 (593)
T KOG0695|consen 477 ------------------------RIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWD 525 (593)
T ss_pred ------------------------cccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHH
Confidence 011245667888999999999999964 6799999999976653
No 317
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-42 Score=365.48 Aligned_cols=263 Identities=29% Similarity=0.470 Sum_probs=220.6
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
+++...+||.|.||.||-|.+..+|...|+|.++...........+.+|+.+|..++|||+|+.+++-.+ .+.++|.|
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvH--Rekv~IFM 1313 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVH--REKVYIFM 1313 (1509)
T ss_pred eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeec--HHHHHHHH
Confidence 5677889999999999999999999999999998776666666778899999999999999999998877 56689999
Q ss_pred eeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC---CC
Q 011763 211 EYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH---RQ 287 (478)
Q Consensus 211 e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~---~~ 287 (478)
|||+++.+..+.....-.++...+.+..|++.|+.|||++|||||||||+||+|+.+|.+|++|||.|....... ..
T Consensus 1314 EyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~ 1393 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPG 1393 (1509)
T ss_pred HHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCH
Confidence 999999998888887778889999999999999999999999999999999999999999999999997665432 12
Q ss_pred CccccccCCcccCcccccCCC--CCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 288 PLTSRVVTLWYRPPELLLGAT--DYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~--~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
......||+.|||||++.+.. ....++|||||||++.||+||+-||...+..=++.-.+.....|+
T Consensus 1394 el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq------------ 1461 (1509)
T KOG4645|consen 1394 ELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQ------------ 1461 (1509)
T ss_pred HHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCC------------
Confidence 335568899999999998743 456789999999999999999999986554433322232222221
Q ss_pred cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCCC
Q 011763 366 TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYA 422 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~~ 422 (478)
.| ..++.+..+||.+||..||.+|+++.|+|+|.|=+.....
T Consensus 1462 ------~P---------~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d~ 1503 (1509)
T KOG4645|consen 1462 ------IP---------ERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTDE 1503 (1509)
T ss_pred ------Cc---------hhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccccccc
Confidence 11 2488899999999999999999999999999997754433
No 318
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2.8e-39 Score=316.64 Aligned_cols=251 Identities=21% Similarity=0.317 Sum_probs=200.3
Q ss_pred ccceeeeeeeeecCceEEEEEEEC-----CCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDL-----DTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS 203 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~-----~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 203 (478)
..+|.+.+.||+|+||.||++.+. .++..+++|.+.... ....+.+.+|+.++++++|+||+++++++.. .
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~ 79 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT--LAARKDFQREAELLTNLQHEHIVKFYGVCGD--G 79 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc--HHHHHHHHHHHHHHhcCCCCCcceEEEEEcc--C
Confidence 457999999999999999999853 345678999886432 3444667899999999999999999999876 6
Q ss_pred ceEEEEEeeccCCchhhccCC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecC
Q 011763 204 CSIYLVFEYMEHDITGLLSCP----------------DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE 267 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~----------------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~ 267 (478)
...++||||++++.+..+... ...+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~ 159 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN 159 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC
Confidence 679999999987655544321 2348999999999999999999999999999999999999999
Q ss_pred CcEEEeecccccccCCCCC-CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 011763 268 GVLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKI 345 (478)
Q Consensus 268 ~~vkl~DFG~a~~~~~~~~-~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i 345 (478)
+.++|+|||++........ .......++..|+|||++.+ ..++.++|||||||++|+|++ |..||...+..+.+..+
T Consensus 160 ~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~ 238 (291)
T cd05094 160 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI 238 (291)
T ss_pred CcEEECCCCcccccCCCceeecCCCCCcceeecChHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 9999999999975543221 11223345788999998876 678899999999999999998 99999887776655443
Q ss_pred HHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 346 FKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 346 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
... ..+ .....++..+.+||.+||+.||.+|||+.++++
T Consensus 239 ~~~--~~~--------------------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 239 TQG--RVL--------------------------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred hCC--CCC--------------------------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 221 000 001246788999999999999999999999874
No 319
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=3.1e-39 Score=309.68 Aligned_cols=246 Identities=25% Similarity=0.374 Sum_probs=202.4
Q ss_pred eeeeecCceEEEEEEECCC---CcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEee
Q 011763 136 EKIGQGTYSSVFRARDLDT---GKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEY 212 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~---~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~ 212 (478)
+.||+|+||.||+|.+... +..|++|++....... ..+.+.+|+.+++.++|+||+++++++.. ...+++||||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv~e~ 77 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTE--EEPLYLVLEY 77 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecC--CCceEEEEEe
Confidence 4689999999999998765 8899999998654332 46778899999999999999999999887 6789999999
Q ss_pred ccCCchhhccCC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCC
Q 011763 213 MEHDITGLLSCP---------DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNT 283 (478)
Q Consensus 213 ~~~~ll~~~~~~---------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~ 283 (478)
++++.+..+... ...+++..++.++.||+.||.|||+++|+|+||+|+||+++.++.++|+|||.+.....
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred ccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 976555544443 36799999999999999999999999999999999999999999999999999976654
Q ss_pred CCC-CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCC
Q 011763 284 GHR-QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK 361 (478)
Q Consensus 284 ~~~-~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 361 (478)
... .......++..|+|||.+.. ..++.++|||||||++|+|++ |..||......+....+... ...
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~--~~~-------- 226 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKD-GIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKG--YRL-------- 226 (262)
T ss_pred ccccccccCCCcCccccCHHHhcc-CCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC--CCC--------
Confidence 321 11233456888999998876 578999999999999999999 69999988766665555431 000
Q ss_pred CCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 362 LPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 362 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
.....++.++.++|.+||..||++|||+.+++++
T Consensus 227 ------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 227 ------------------PKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred ------------------CCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 0112468899999999999999999999999875
No 320
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2.7e-39 Score=311.24 Aligned_cols=248 Identities=21% Similarity=0.372 Sum_probs=200.0
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|+++++||+|+||.||+|... +++.||+|.+...... ...+.+|+.++++++|+||+++++++.. ...|+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~~ 77 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMS---PEAFLAEANLMKQLQHPRLVRLYAVVTQ---EPIYI 77 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCc---HHHHHHHHHHHHhcCCcCeeeEEEEEcc---CCcEE
Confidence 568999999999999999999864 5788999998755433 3467789999999999999999988743 45899
Q ss_pred EEeeccCCchhhc-cC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 209 VFEYMEHDITGLL-SC-PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 209 v~e~~~~~ll~~~-~~-~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
+|||+.++.+..+ .. ....+++..+..++.||+.||.|||++|++|+||||+||++++++.++|+|||++........
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05067 78 ITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY 157 (260)
T ss_pred EEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc
Confidence 9999987544433 22 334689999999999999999999999999999999999999999999999999976543222
Q ss_pred CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 287 QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 287 ~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
.......++..|+|||++.. ..++.++|||||||++|+|++ |++||.+.+..+....+......+
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~------------- 223 (260)
T cd05067 158 TAREGAKFPIKWTAPEAINY-GTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMP------------- 223 (260)
T ss_pred ccccCCcccccccCHHHhcc-CCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCC-------------
Confidence 22223344678999998875 668899999999999999998 999999887766655543221110
Q ss_pred cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 366 TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
.....+.++.+||.+||+.||++|||+++++.
T Consensus 224 ---------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 224 ---------------RPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred ---------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 01246788999999999999999999999874
No 321
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=3e-39 Score=313.37 Aligned_cols=254 Identities=20% Similarity=0.354 Sum_probs=202.1
Q ss_pred ccceeeeeeeeecCceEEEEEEECC-----CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLD-----TGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS 203 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~-----~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 203 (478)
.++|++++.||.|+||.||+|+... +.+.|++|.+.... .......+.+|+.+|++++|+||+++++++.+ .
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~ 80 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCRE--A 80 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEECC--C
Confidence 4589999999999999999999653 35679999886433 23345678889999999999999999998876 5
Q ss_pred ceEEEEEeeccCCchhhccCCCC---------CCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEee
Q 011763 204 CSIYLVFEYMEHDITGLLSCPDI---------KFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLAD 274 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~~~---------~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~D 274 (478)
...|+||||++++.+..+..... .+++..+..++.||+.||.|||+++|+|+||||+|||++.++.++|+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 81 EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcc
Confidence 67899999999766655443332 689999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCC
Q 011763 275 FGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPP 353 (478)
Q Consensus 275 FG~a~~~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~ 353 (478)
||++...............++..|+|||.+.+ ..++.++|||||||++|+|++ |..||........+..+.... ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~--~~ 237 (275)
T cd05046 161 LSLSKDVYNSEYYKLRNALIPLRWLAPEAVQE-DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGK--LE 237 (275)
T ss_pred cccccccCcccccccCCceeEEeecChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCC--cC
Confidence 99986543222222233455778999998876 567889999999999999998 889998766655554432210 00
Q ss_pred chhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 354 DDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
| .....++..+.++|.+||..||.+|||+.++|.+
T Consensus 238 ---~----------------------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 238 ---L----------------------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred ---C----------------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 0 0012577899999999999999999999999864
No 322
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=4.4e-39 Score=311.05 Aligned_cols=252 Identities=23% Similarity=0.342 Sum_probs=203.3
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCc---EEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCce
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGK---IVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCS 205 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~---~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 205 (478)
.++|+..+.||+|+||.||++.+..++. .+|+|.+.... .......+..|+.++..++|+||+++++++.. ...
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~ 80 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTK--FKP 80 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEcc--CCC
Confidence 4589999999999999999999876554 79999986543 33445667889999999999999999999876 567
Q ss_pred EEEEEeeccCCchhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 206 IYLVFEYMEHDITGLLS-CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
.|+||||++++.+..+. .....+++..+..++.|++.||+|||+.|++|+||||+||+++.++.+||+|||++......
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 160 (268)
T cd05063 81 AMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDD 160 (268)
T ss_pred cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccc
Confidence 89999999986665554 33457899999999999999999999999999999999999999999999999998755432
Q ss_pred CCCCccc--cccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCC
Q 011763 285 HRQPLTS--RVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK 361 (478)
Q Consensus 285 ~~~~~~~--~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 361 (478)
....... ...+..|+|||++.+ ..++.++|||||||++|+|++ |+.||...+..+....+.... ..+.
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~-~~~~------- 231 (268)
T cd05063 161 PEGTYTTSGGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF-RLPA------- 231 (268)
T ss_pred cccceeccCCCcCceecCHHHhhc-CCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC-CCCC-------
Confidence 2111111 122457999998876 568899999999999999997 999998877766665554321 1110
Q ss_pred CCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 362 LPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 362 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
...++.++.+||.+||..||++||++.++++
T Consensus 232 --------------------~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 232 --------------------PMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred --------------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 1246788999999999999999999999984
No 323
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=3.3e-39 Score=308.19 Aligned_cols=246 Identities=33% Similarity=0.494 Sum_probs=204.3
Q ss_pred eeecCceEEEEEEECCCCcEEEEEEeecCCCC-hHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeeccCC
Q 011763 138 IGQGTYSSVFRARDLDTGKIVALKKVRFDNFE-PESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHD 216 (478)
Q Consensus 138 LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~~~ 216 (478)
||.|+||.||++.+..+++.||+|++...... ......+.+|+.+++.++|+||+++++.+.. +..+|+||||+.++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~e~~~~~ 78 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQT--EEKLYLVLEYAPGG 78 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeec--CCeeEEEEecCCCC
Confidence 68999999999999888999999998765432 3355677889999999999999999999876 67899999999776
Q ss_pred chhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccccCC
Q 011763 217 ITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTL 296 (478)
Q Consensus 217 ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~t~ 296 (478)
.+..+......+++..+..++.||+.||.|||+.+++|+||+|+||+++.++.++|+|||++....... .......++.
T Consensus 79 ~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~ 157 (250)
T cd05123 79 ELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNTFCGTP 157 (250)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccCCcCCc
Confidence 555555555578999999999999999999999999999999999999999999999999987654321 1223455688
Q ss_pred cccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCc
Q 011763 297 WYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDS 376 (478)
Q Consensus 297 ~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (478)
.|++||.+.+ ..++.++|+|+||+++|+|++|..||...+..+....+... .++
T Consensus 158 ~~~~Pe~~~~-~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~--~~~----------------------- 211 (250)
T cd05123 158 EYLAPEVLLG-KGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKD--PLR----------------------- 211 (250)
T ss_pred cccChHHhCC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC--CCC-----------------------
Confidence 8999998876 55788999999999999999999999877765544444321 000
Q ss_pred cchhcccCCchhHHHHHHHhcCCCCCCccCH---HHHHhCccc
Q 011763 377 SLRETFKDLPTTAVNLIETLLSVEPYKRATA---SAALASEYF 416 (478)
Q Consensus 377 ~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta---~e~L~hp~f 416 (478)
....++..+.++|.+||..||++|||+ .++++||||
T Consensus 212 ----~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 212 ----FPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred ----CCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 012357889999999999999999999 999999998
No 324
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.9e-39 Score=314.14 Aligned_cols=264 Identities=23% Similarity=0.316 Sum_probs=196.7
Q ss_pred eeeeeeeeecCceEEEEEE----ECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEE
Q 011763 132 FEKLEKIGQGTYSSVFRAR----DLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 132 y~~~~~LG~G~~g~V~~~~----~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
|++++.||+|+||+||++. ...++..||+|+++... .......+.+|+.+|+.++||||+++++++.......+|
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQ 84 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEE
Confidence 4999999999999998864 34567899999987553 233456677899999999999999999988765556789
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
+||||+.++.+..+... ..+++..++.++.||+.||.|||+++|+|+||||+|||++.++.++|+|||++.........
T Consensus 85 lv~e~~~~~~l~~~~~~-~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~ 163 (283)
T cd05080 85 LIMEYVPLGSLRDYLPK-HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 163 (283)
T ss_pred EEecCCCCCCHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchh
Confidence 99999998766655443 35899999999999999999999999999999999999999999999999999765432211
Q ss_pred --CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH-cCCCCchhhccCCCCC
Q 011763 288 --PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKL-CGSPPDDYWKKSKLPH 364 (478)
Q Consensus 288 --~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~ 364 (478)
......++..|+|||++.+ ..++.++|||||||++|+|++|..||...... +..+... .+......+.. ...
T Consensus 164 ~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~ 238 (283)
T cd05080 164 YRVREDGDSPVFWYAVECLKE-NKFSYASDVWSFGVTLYELLTHCDSKQSPPKK--FEEMIGPKQGQMTVVRLIE--LLE 238 (283)
T ss_pred hccCCCCCCCceeeCHhHhcc-cCCCcccccHHHHHHHHHHHhCCCCCCCCcch--hhhhhcccccccchhhhhh--hhh
Confidence 1112234667999998876 66889999999999999999999998654321 1111100 00000000000 000
Q ss_pred ccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 365 ATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 365 ~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
.. .. ......++..+.+|+.+||+.||++|||+.++++
T Consensus 239 ~~---~~-------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 239 RG---MR-------LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred cC---CC-------CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 00 00 0011356789999999999999999999999984
No 325
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2.8e-39 Score=316.04 Aligned_cols=264 Identities=25% Similarity=0.412 Sum_probs=204.4
Q ss_pred ceeeeeeeeecCceEEEEEEEC---CCCcEEEEEEeecCCC--ChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCc
Q 011763 131 AFEKLEKIGQGTYSSVFRARDL---DTGKIVALKKVRFDNF--EPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSC 204 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~---~~~~~vAlK~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 204 (478)
+|++.+.||.|+||.||++++. .+++.||||+++.... .....+.+.+|+.++.++ +||||+++++.+.. ..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~--~~ 78 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQT--DT 78 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeec--CC
Confidence 4889999999999999999864 4678899999875422 123345677899999999 69999999998876 67
Q ss_pred eEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 205 SIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
.+|+||||+.++.+.........+++..++.++.|++.+|.|||+.+++|+||+|.||+++.++.++|+|||++......
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 79 KLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence 79999999998666555555567899999999999999999999999999999999999999999999999998765433
Q ss_pred CCCCccccccCCcccCcccccCCC-CCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCC
Q 011763 285 HRQPLTSRVVTLWYRPPELLLGAT-DYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP 363 (478)
Q Consensus 285 ~~~~~~~~~~t~~y~APE~l~~~~-~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 363 (478)
.........++..|+|||.+.+.. .++.++||||||+++|+|++|..||...........+....-..
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~----------- 227 (288)
T cd05583 159 EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS----------- 227 (288)
T ss_pred cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc-----------
Confidence 222222345788999999886532 36789999999999999999999997543221111111110000
Q ss_pred CccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccC---HHHHHhCcccCCCCC
Q 011763 364 HATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT---ASAALASEYFSTKPY 421 (478)
Q Consensus 364 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t---a~e~L~hp~f~~~~~ 421 (478)
. ......++..+.+||.+||+.||++||| +.++|+||||+...+
T Consensus 228 -------~-------~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~ 274 (288)
T cd05583 228 -------K-------PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDW 274 (288)
T ss_pred -------C-------CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCH
Confidence 0 0001246788999999999999999998 567899999987554
No 326
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=4.5e-39 Score=311.08 Aligned_cols=252 Identities=25% Similarity=0.371 Sum_probs=202.2
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCC---cEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCce
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTG---KIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCS 205 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~---~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 205 (478)
.++|++.+.||+|+||.||+|.+..++ ..+|+|.++... .....+.+.+|+.++..++||||+++++++.. ...
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~ 79 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK--SKP 79 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec--CCc
Confidence 458999999999999999999876444 379999987543 33455678889999999999999999999876 567
Q ss_pred EEEEEeeccCCchhhc-cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 206 IYLVFEYMEHDITGLL-SCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~-~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
.|+||||++++.+..+ ......+++..+..++.||+.||.|||+++++|+||||+|||++.++.++|+|||++......
T Consensus 80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 80 VMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 159 (267)
T ss_pred cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence 8999999987655444 344456899999999999999999999999999999999999999999999999999765432
Q ss_pred CCCCcc--ccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCC
Q 011763 285 HRQPLT--SRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK 361 (478)
Q Consensus 285 ~~~~~~--~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 361 (478)
...... ....+..|+|||++.+ ..++.++|||||||++|+|++ |..||......+....+.+.... +
T Consensus 160 ~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~-~-------- 229 (267)
T cd05066 160 PEAAYTTRGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRL-P-------- 229 (267)
T ss_pred cceeeecCCCccceeecCHhHhcc-CccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcC-C--------
Confidence 211111 1222567999999876 668999999999999999886 99999887766655554332110 0
Q ss_pred CCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 362 LPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 362 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
....++..+.+|+.+||+.+|.+||++.++++
T Consensus 230 -------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 230 -------------------APMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred -------------------CCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 01246788999999999999999999999874
No 327
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2.8e-39 Score=324.40 Aligned_cols=255 Identities=22% Similarity=0.314 Sum_probs=196.7
Q ss_pred ccceeeeeeeeecCceEEEEEEE-----CCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecC
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARD-----LDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSRL 202 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~-----~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 202 (478)
.++|++.+.||.|+||+||+|++ ..+++.||||+++... .......+.+|+.+|.++ +||||+++++++...
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~- 83 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKP- 83 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC-ChHHHHHHHHHHHHHHhccCCccHhhhcceeecC-
Confidence 46899999999999999999984 3467899999997543 234456678899999999 789999999988654
Q ss_pred CceEEEEEeeccCCchhhccCC----------------------------------------------------------
Q 011763 203 SCSIYLVFEYMEHDITGLLSCP---------------------------------------------------------- 224 (478)
Q Consensus 203 ~~~~~lv~e~~~~~ll~~~~~~---------------------------------------------------------- 224 (478)
+..+++||||++++.+..+...
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 4568999999998655433211
Q ss_pred ---------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC-CCcccccc
Q 011763 225 ---------DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-QPLTSRVV 294 (478)
Q Consensus 225 ---------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~-~~~~~~~~ 294 (478)
...+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||++........ .......+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL 243 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCC
Confidence 12367888899999999999999999999999999999999999999999999876432211 11112234
Q ss_pred CCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCC
Q 011763 295 TLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQP 373 (478)
Q Consensus 295 t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 373 (478)
+..|+|||++.+ ..++.++|||||||++|+|++ |..||........+.........++
T Consensus 244 ~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------- 302 (343)
T cd05103 244 PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR-------------------- 302 (343)
T ss_pred CcceECcHHhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCC--------------------
Confidence 667999999876 678999999999999999997 9999987544333322221100000
Q ss_pred CCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 374 YDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 374 ~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
.....++++.+++..||+.||.+|||+.++++|
T Consensus 303 -------~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 303 -------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred -------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 001356789999999999999999999999976
No 328
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=6.3e-39 Score=308.79 Aligned_cols=248 Identities=23% Similarity=0.354 Sum_probs=198.0
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|.+.+.||+|+||.||++.+..+ ..+|+|++..... ..+.+.+|+.+++.++|+||+++++++.. ...|+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~~ 77 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVSE---EPIYI 77 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEcC---CCcEE
Confidence 35799999999999999999987654 4699998865432 23457789999999999999999887743 45789
Q ss_pred EEeeccCC-chhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 209 VFEYMEHD-ITGLLSC-PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 209 v~e~~~~~-ll~~~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
||||+.++ +...+.. ....+++..+..++.||+.||.|||+.||+|+||||+||++++++.++|+|||++........
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05069 78 VTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred EEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcc
Confidence 99999975 4444433 233588999999999999999999999999999999999999999999999999976543322
Q ss_pred CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 287 QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 287 ~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
.......++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+....+....+.... .++
T Consensus 158 ~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~------------ 223 (260)
T cd05069 158 TARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGY-RMP------------ 223 (260)
T ss_pred cccCCCccchhhCCHHHhcc-CCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCC------------
Confidence 22222344678999998875 668999999999999999999 999999887766665553311 000
Q ss_pred cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 366 TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
....++..+.+||.+||..||.+||++.++++
T Consensus 224 ---------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 224 ---------------CPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred ---------------CCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 01256788999999999999999999999874
No 329
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=3.8e-39 Score=316.34 Aligned_cols=259 Identities=22% Similarity=0.282 Sum_probs=200.6
Q ss_pred ccceeeeeeeeecCceEEEEEEECCC--------------CcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeee
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDT--------------GKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKL 194 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~--------------~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l 194 (478)
.++|++.+.||+|+||.||+|++..+ ...||+|+++... .......+.+|+++|.+++|+||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~ 82 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV-TKTARNDFLKEIKIMSRLKNPNIIRL 82 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence 45899999999999999999987543 2358999987543 34555678899999999999999999
Q ss_pred cceeeecCCceEEEEEeeccCCchhhccCCC------------CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcE
Q 011763 195 EGLITSRLSCSIYLVFEYMEHDITGLLSCPD------------IKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNL 262 (478)
Q Consensus 195 ~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~------------~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NI 262 (478)
++++.. ....|+||||+.++.+..+.... ..+++..+..++.||+.||.|||+++++|+||||+||
T Consensus 83 ~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Ni 160 (295)
T cd05097 83 LGVCVS--DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNC 160 (295)
T ss_pred EEEEcC--CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhE
Confidence 999876 56789999999986554433211 2368889999999999999999999999999999999
Q ss_pred EEecCCcEEEeecccccccCCCCC-CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh--CCCCCCCCChH
Q 011763 263 LVNNEGVLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI--GKPILQGRTEV 339 (478)
Q Consensus 263 Ll~~~~~vkl~DFG~a~~~~~~~~-~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt--G~~pf~~~~~~ 339 (478)
|+++++.+||+|||++........ .......++..|+|||++.+ ..++.++|||||||++|+|++ +..||...+..
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~ 239 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE 239 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhcc-CCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH
Confidence 999999999999999875433211 11122334678999999876 568999999999999999998 66889887766
Q ss_pred HHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 340 EQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 340 ~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
+.+..+.......... ......+.+++.+.+||.+||..||.+|||+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 240 QVIENTGEFFRNQGRQ---------------------IYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHHHhhhhcccc---------------------ccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 6655543321100000 000011246789999999999999999999999974
No 330
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=4.2e-39 Score=313.70 Aligned_cols=251 Identities=22% Similarity=0.323 Sum_probs=200.3
Q ss_pred ccceeeeeeeeecCceEEEEEEEC-----CCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDL-----DTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS 203 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~-----~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 203 (478)
..+|.+.++||+|+||.||++... .++..+|+|.+... .......+.+|+++++.++|+||+++++++.. .
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~ 79 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTVLQHQHIVRFYGVCTE--G 79 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC--CHHHHHHHHHHHHHHhcCCCCCCceEEEEEec--C
Confidence 457999999999999999999742 35678999987643 34555678899999999999999999998877 5
Q ss_pred ceEEEEEeeccCCchhhccCCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCC
Q 011763 204 CSIYLVFEYMEHDITGLLSCPD---------------IKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG 268 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~~---------------~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~ 268 (478)
...+++|||+.++.+..+.... ..+++..+..++.||+.||.|||++||+|+||||+|||+++++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~ 159 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGL 159 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCC
Confidence 6789999999876554443221 3488999999999999999999999999999999999999999
Q ss_pred cEEEeecccccccCCCCC-CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 011763 269 VLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIF 346 (478)
Q Consensus 269 ~vkl~DFG~a~~~~~~~~-~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~ 346 (478)
.+||+|||++........ .......+++.|+|||++.+ ..++.++|||||||++|+|++ |.+||......+.+..+.
T Consensus 160 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~ 238 (280)
T cd05092 160 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY-RKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECIT 238 (280)
T ss_pred CEEECCCCceeEcCCCceeecCCCccccccccCHHHhcc-CCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHH
Confidence 999999999875432211 11122234678999998876 668999999999999999998 999998877766655543
Q ss_pred HHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 347 KLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 347 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
... ++ .....+++.+.+||.+||+.||.+||++.+++.
T Consensus 239 ~~~--~~--------------------------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 239 QGR--EL--------------------------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred cCc--cC--------------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 211 00 001256788999999999999999999999974
No 331
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=8.4e-39 Score=306.93 Aligned_cols=244 Identities=23% Similarity=0.353 Sum_probs=199.8
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|++.+.||.|+||.||++.. .++.||+|++..... ..+.+.+|+.+++.++|+||+++++++.+ ....|+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~ 77 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQ--GNPLYI 77 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcC--CCCeEE
Confidence 56899999999999999999986 478999999975532 45678889999999999999999999877 677999
Q ss_pred EEeeccCCchhhccCCCC--CCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDI--KFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~--~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
||||++++.+..+..... .+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||.+.......
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~- 156 (256)
T cd05039 78 VTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ- 156 (256)
T ss_pred EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccccc-
Confidence 999999755554433322 68999999999999999999999999999999999999999999999999997664321
Q ss_pred CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 287 QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 287 ~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
.....+..|+|||++.. ..++.++|||||||++|+|++ |..||...+..+....+.... .+
T Consensus 157 ---~~~~~~~~~~ape~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~------------- 218 (256)
T cd05039 157 ---DSGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGY-RM------------- 218 (256)
T ss_pred ---ccCCCcccccCchhhcC-CcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCC-CC-------------
Confidence 12234567999998875 678899999999999999997 999998776655444332210 00
Q ss_pred cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 366 TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
.....+++.+.+||.+||..+|++|||+.++++
T Consensus 219 --------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 219 --------------EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred --------------CCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 001246889999999999999999999999985
No 332
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.2e-39 Score=317.32 Aligned_cols=253 Identities=22% Similarity=0.315 Sum_probs=198.7
Q ss_pred ccceeeeeeeeecCceEEEEEEECC-------CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeee
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLD-------TGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITS 200 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~-------~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 200 (478)
.++|.+.+.||+|+||.||++++.. +...||+|++..+. .......+.+|+.+++.+ +|+||+++++++..
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 5789999999999999999998643 23579999997543 334456677899999999 79999999999877
Q ss_pred cCCceEEEEEeeccCCchhhccCC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEE
Q 011763 201 RLSCSIYLVFEYMEHDITGLLSCP----------------DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLV 264 (478)
Q Consensus 201 ~~~~~~~lv~e~~~~~ll~~~~~~----------------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl 264 (478)
....|+||||+.++.+..+... ...+++..+..++.||+.||+|||++|++||||||+|||+
T Consensus 96 --~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill 173 (307)
T cd05098 96 --DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 173 (307)
T ss_pred --CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEE
Confidence 5679999999987554433321 1348889999999999999999999999999999999999
Q ss_pred ecCCcEEEeecccccccCCCCCCC-ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 011763 265 NNEGVLKLADFGLANFSNTGHRQP-LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQL 342 (478)
Q Consensus 265 ~~~~~vkl~DFG~a~~~~~~~~~~-~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~ 342 (478)
+.++.+||+|||++.......... .....+++.|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+..
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~ 252 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 252 (307)
T ss_pred cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhcc-CCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHH
Confidence 999999999999987554221111 111223567999999876 668999999999999999998 88999876655444
Q ss_pred HHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 343 HKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 343 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
..+.... .+ .....++.++.+||.+||..+|.+|||+.+++++
T Consensus 253 ~~~~~~~--~~--------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 253 KLLKEGH--RM--------------------------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred HHHHcCC--CC--------------------------CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 4332210 00 0112567899999999999999999999999854
No 333
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=6.1e-39 Score=308.24 Aligned_cols=244 Identities=20% Similarity=0.281 Sum_probs=194.8
Q ss_pred eeeeecCceEEEEEEECCCC---cEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEee
Q 011763 136 EKIGQGTYSSVFRARDLDTG---KIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEY 212 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~---~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~ 212 (478)
++||+|+||.||+|....++ ..||+|.+...... ...+.+.+|+.+++.++|+||+++++++.. ...++||||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~v~e~ 76 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCKG---EPLMLVMEL 76 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEcC---CceEEEEEe
Confidence 46999999999999875544 78999999866543 445677889999999999999999987753 457999999
Q ss_pred ccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCcc--
Q 011763 213 MEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLT-- 290 (478)
Q Consensus 213 ~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~-- 290 (478)
++++.+..+......+++..+..++.||+.||.|||+++++|+||||+|||++.++.+||+|||+++...........
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~ 156 (257)
T cd05060 77 APLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATT 156 (257)
T ss_pred CCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCccccccc
Confidence 987655555555557899999999999999999999999999999999999999999999999999766433221111
Q ss_pred ccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccC
Q 011763 291 SRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFK 369 (478)
Q Consensus 291 ~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 369 (478)
...++..|+|||.+.+ ..++.++|||||||++|+|++ |.+||...+..+....+... ...
T Consensus 157 ~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~-~~~----------------- 217 (257)
T cd05060 157 AGRWPLKWYAPECINY-GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESG-ERL----------------- 217 (257)
T ss_pred CccccccccCHHHhcC-CCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC-CcC-----------------
Confidence 1122457999998876 668999999999999999998 99999887765554444221 000
Q ss_pred CCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 370 PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 370 ~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
.....++..+.+||.+||..||.+||++.++++
T Consensus 218 ----------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 218 ----------PRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred ----------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 011356788999999999999999999999874
No 334
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=6.7e-39 Score=312.16 Aligned_cols=251 Identities=17% Similarity=0.273 Sum_probs=196.6
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCc----EEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCc
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGK----IVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSC 204 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~----~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 204 (478)
.++|++++.||+|+||+||+|.+..+++ .|++|.+.... .......+..|+.++..++||||+++++++.. .
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~---~ 81 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS-GRQTFQEITDHMLAMGSLDHAYIVRLLGICPG---A 81 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc-chHHHHHHHHHHHHHhcCCCCCcceEEEEECC---C
Confidence 5689999999999999999999877776 47777765322 23344567788889999999999999998743 4
Q ss_pred eEEEEEeeccCCch-hhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCC
Q 011763 205 SIYLVFEYMEHDIT-GLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNT 283 (478)
Q Consensus 205 ~~~lv~e~~~~~ll-~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~ 283 (478)
..++++||+.++.+ ..+......+++..+..++.||+.||.|||+++++|+||||+|||++.++.+||+|||+++....
T Consensus 82 ~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 82 SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred ccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 57889999986544 44444456789999999999999999999999999999999999999999999999999976543
Q ss_pred CCCC-CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCC
Q 011763 284 GHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK 361 (478)
Q Consensus 284 ~~~~-~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 361 (478)
.... ......++..|+|||++.+ ..++.++|||||||++|||++ |..||.+......... +.....++.
T Consensus 162 ~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~-~~~~~~~~~------- 232 (279)
T cd05111 162 DDKKYFYSEHKTPIKWMALESILF-GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDL-LEKGERLAQ------- 232 (279)
T ss_pred CCcccccCCCCCcccccCHHHhcc-CCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HHCCCcCCC-------
Confidence 2221 1223345678999999876 668999999999999999998 9999988765443322 221111100
Q ss_pred CCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 362 LPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 362 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
....+.++.+++.+||..||.+|||+.++++
T Consensus 233 --------------------~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 233 --------------------PQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred --------------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 0124567899999999999999999999976
No 335
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=9.5e-39 Score=306.41 Aligned_cols=250 Identities=24% Similarity=0.376 Sum_probs=201.4
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
..+|++.+.||.|+||.||++.+. .+..+|+|++...... ...+.+|+++++.++||||+++++++.. ....|+
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~ 76 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCTE--RSPICL 76 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEcc--CCceEE
Confidence 357999999999999999999875 4678999998755433 2456789999999999999999998876 567899
Q ss_pred EEeeccCCchhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 209 VFEYMEHDITGLLS-CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 209 v~e~~~~~ll~~~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
||||+.++.+..+. .....+++..++.++.||+.+|.|||+++++|+||||+||+++.++.++|+|||++.........
T Consensus 77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 156 (256)
T cd05112 77 VFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT 156 (256)
T ss_pred EEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCccc
Confidence 99999986665444 33456899999999999999999999999999999999999999999999999998755432211
Q ss_pred CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcc
Q 011763 288 PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHAT 366 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 366 (478)
.......+..|+|||++.+ ..++.++|||||||++|+|++ |..||......+.+..+.......
T Consensus 157 ~~~~~~~~~~~~aPe~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-------------- 221 (256)
T cd05112 157 SSTGTKFPVKWSSPEVFSF-SKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLY-------------- 221 (256)
T ss_pred ccCCCccchhhcCHhHhcc-CCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCC--------------
Confidence 1222334678999998876 668899999999999999998 999998877666655543211000
Q ss_pred ccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 367 LFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 367 ~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
. ....+..+.+|+.+||+.+|++|||+.++|++
T Consensus 222 --------~------~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 222 --------K------PRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred --------C------CCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 0 01357889999999999999999999999864
No 336
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=5.8e-39 Score=308.20 Aligned_cols=245 Identities=19% Similarity=0.335 Sum_probs=196.6
Q ss_pred cccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEE
Q 011763 128 RADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 128 ~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
..++|++.+.||+|+||.||++.. .+..||+|.+..+. ..+.+.+|+.++++++|+||+++++++... ....|
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~ 76 (256)
T cd05082 4 NMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEE-KGGLY 76 (256)
T ss_pred cHHhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCc----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcC-CCceE
Confidence 356899999999999999999976 47789999986432 245677899999999999999999876543 45689
Q ss_pred EEEeeccCCchhhc-cCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC
Q 011763 208 LVFEYMEHDITGLL-SCPD-IKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH 285 (478)
Q Consensus 208 lv~e~~~~~ll~~~-~~~~-~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~ 285 (478)
+||||++++.+..+ .... ..+++..+..++.||+.||.|||++||+||||||+||++++++.+||+|||++.......
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~ 156 (256)
T cd05082 77 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 156 (256)
T ss_pred EEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccC
Confidence 99999987554443 3322 348899999999999999999999999999999999999999999999999987543321
Q ss_pred CCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 286 RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 286 ~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
.....+..|+|||++.+ ..++.++|||||||++|+|++ |+.||...+..+....+.... .+
T Consensus 157 ----~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~--~~----------- 218 (256)
T cd05082 157 ----DTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY--KM----------- 218 (256)
T ss_pred ----CCCccceeecCHHHHcc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC--CC-----------
Confidence 22334567999998876 668899999999999999997 999998776655554442210 00
Q ss_pred ccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 365 ATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 365 ~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
.....++..+.+||.+||+.||++|||+.++++
T Consensus 219 ---------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 219 ---------------DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred ---------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 011356889999999999999999999999975
No 337
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=6.3e-39 Score=313.93 Aligned_cols=250 Identities=20% Similarity=0.302 Sum_probs=196.8
Q ss_pred ceeeeeeeeecCceEEEEEEECC-----CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCce
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLD-----TGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCS 205 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~-----~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 205 (478)
+|++.+.||+|+||.||+|.+.. ....+++|++.... .......+.+|+.+++.++||||+++++.+.. ...
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~ 77 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA-SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQ--DGP 77 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC-CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEec--CCC
Confidence 47889999999999999998643 23578999886543 33445678889999999999999999998876 567
Q ss_pred EEEEEeeccCCchhhccC------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCc
Q 011763 206 IYLVFEYMEHDITGLLSC------------------------PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSN 261 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~~~------------------------~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~N 261 (478)
.+++|||+.++.+..+.. ....+++..+..++.||+.||.|||+++|+||||||+|
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~n 157 (290)
T cd05045 78 LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARN 157 (290)
T ss_pred cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhhe
Confidence 899999999765554321 12357899999999999999999999999999999999
Q ss_pred EEEecCCcEEEeecccccccCCCCCC-CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChH
Q 011763 262 LLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEV 339 (478)
Q Consensus 262 ILl~~~~~vkl~DFG~a~~~~~~~~~-~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~ 339 (478)
||+++++.+||+|||++......... ......++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+....
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 236 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE 236 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHcc-CCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 99999999999999999754322111 1122234678999998876 668999999999999999998 99999877655
Q ss_pred HHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 340 EQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 340 ~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
+....+..... + .....++.++.+||.+||+.||.+||++.++++
T Consensus 237 ~~~~~~~~~~~-~---------------------------~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 237 RLFNLLKTGYR-M---------------------------ERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred HHHHHHhCCCC-C---------------------------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 54433321100 0 001246788999999999999999999999974
No 338
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=8.2e-39 Score=309.43 Aligned_cols=252 Identities=27% Similarity=0.414 Sum_probs=202.5
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCc---EEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCce
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGK---IVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCS 205 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~---~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 205 (478)
...|++.+.||.|+||.||+|.+..+++ .||||++.... .......+..|+.+++.++||||+++++++.. ...
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~--~~~ 79 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK--SRP 79 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCcCcceEEEEECC--CCc
Confidence 3469999999999999999999876654 69999986542 44556778899999999999999999998876 667
Q ss_pred EEEEEeeccCCchhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 206 IYLVFEYMEHDITGLLS-CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
.++||||++++.+..+. .....+++..++.++.|++.||.|||++|++|+||||+||+++.++.+||+|||++......
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 80 VMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred eEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccC
Confidence 89999999986655443 34456899999999999999999999999999999999999999999999999998765432
Q ss_pred CCCC-ccccc---cCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhcc
Q 011763 285 HRQP-LTSRV---VTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKK 359 (478)
Q Consensus 285 ~~~~-~~~~~---~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~ 359 (478)
.... ..... .+..|+|||++.+ ..++.++|||||||++|||++ |..||...+..+....+......+.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~------ 232 (269)
T cd05065 160 TSDPTYTSSLGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPP------ 232 (269)
T ss_pred ccccccccccCCCcceeecCHhHhcc-CcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCC------
Confidence 2111 11111 1457999999876 678999999999999999886 9999988777666555532111000
Q ss_pred CCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 360 SKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
...++..+.+++.+||..+|.+||++.+++.
T Consensus 233 ----------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 233 ----------------------PMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred ----------------------cccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 1256788999999999999999999999985
No 339
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1e-38 Score=308.92 Aligned_cols=252 Identities=23% Similarity=0.348 Sum_probs=201.0
Q ss_pred ccceeeeeeeeecCceEEEEEEECCC---CcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCce
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDT---GKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCS 205 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~---~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 205 (478)
.++|.+.+.||+|+||.||+|.+... ...||+|.+.... .....+.+.+|+.+++.++||||+++++++.+ ..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~---~~ 80 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE---NP 80 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC---CC
Confidence 45799999999999999999987543 4568999886443 34556678899999999999999999998865 34
Q ss_pred EEEEEeeccCCchhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 206 IYLVFEYMEHDITGLLS-CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
.|+||||++++.+..+. .....+++..+..++.||+.||.|||+++++|+||||+|||++.++.++|+|||++......
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 160 (270)
T cd05056 81 VWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE 160 (270)
T ss_pred cEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence 78999999876555444 33446899999999999999999999999999999999999999999999999999765433
Q ss_pred CCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCC
Q 011763 285 HRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP 363 (478)
Q Consensus 285 ~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 363 (478)
..........+..|+|||.+.. ..++.++|||||||++|+|++ |..||...+..+....+......
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~------------ 227 (270)
T cd05056 161 SYYKASKGKLPIKWMAPESINF-RRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERL------------ 227 (270)
T ss_pred cceecCCCCccccccChhhhcc-CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcC------------
Confidence 2111122233567999998875 668999999999999999986 99999888776665554321100
Q ss_pred CccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 364 HATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 364 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
.....++..+.+||.+||..+|.+|||+.+++..
T Consensus 228 ----------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 228 ----------------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred ----------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0113567899999999999999999999998853
No 340
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.4e-38 Score=310.34 Aligned_cols=269 Identities=23% Similarity=0.337 Sum_probs=197.1
Q ss_pred ccceeeeeeeeecCceEEEEEE----ECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCc
Q 011763 129 ADAFEKLEKIGQGTYSSVFRAR----DLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSC 204 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~----~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 204 (478)
..+|++++.||+|+||.||++. +..++..||+|++... .....+.+.+|+.+|+.++||||+++++++......
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 80 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC
Confidence 3479999999999999999997 3457889999998644 345556788999999999999999999987655456
Q ss_pred eEEEEEeeccCCchhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCC
Q 011763 205 SIYLVFEYMEHDITGLLS-CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNT 283 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~ 283 (478)
.+++||||++++.+..+. .....+++..+..++.||+.||.|||++||+|+||||+|||+++++.+||+|||++.....
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 160 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQ 160 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccC
Confidence 789999999876555443 4445689999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCC--ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCC
Q 011763 284 GHRQP--LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK 361 (478)
Q Consensus 284 ~~~~~--~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 361 (478)
..... ......+..|+|||++.+ ..++.++|||||||++|||++|..++..... .....+...... +...+...+
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~ 237 (284)
T cd05081 161 DKEYYKVREPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYSDKSCSPPA-EFMRMMGNDKQG-QMIVYHLIE 237 (284)
T ss_pred CCcceeecCCCCCceEeeCHHHhcc-CCcChHHHHHHHHHHHHHHhhcCCcCCCcch-hhhhhccccccc-ccchHHHHH
Confidence 22111 111123456999999876 6689999999999999999998877643321 111111000000 000000000
Q ss_pred CCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 362 LPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 362 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
..... ........++.++.+||.+||..||++|||+.++++
T Consensus 238 -----~~~~~-----~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 238 -----LLKNN-----GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred -----HHhcC-----CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 00000 000011357789999999999999999999999985
No 341
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.4e-39 Score=311.97 Aligned_cols=248 Identities=29% Similarity=0.429 Sum_probs=194.7
Q ss_pred eeeeeeeecCceEEEEEEEC----CCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 133 EKLEKIGQGTYSSVFRARDL----DTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 133 ~~~~~LG~G~~g~V~~~~~~----~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
++.+.||.|.||.||+|... ..+..|+||+++.. ...+..+.+.+|++++++++||||+++++++.. ....++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~--~~~~~l 78 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS-SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIE--NEPLFL 78 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT-SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEES--SSSEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc-cccccceeeeecccccccccccccccccccccc--cccccc
Confidence 46789999999999999887 45678999999543 345557888999999999999999999999985 555999
Q ss_pred EEeeccCCchh-hccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 209 VFEYMEHDITG-LLSCP-DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 209 v~e~~~~~ll~-~~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
||||+.++.+. .+... ...+++..+..|+.||+.||.|||+++|+|+||++.||||+.++.+||+|||++........
T Consensus 79 v~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 79 VMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp EEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999975554 44443 46799999999999999999999999999999999999999999999999999976632111
Q ss_pred -CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 287 -QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 287 -~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
...........|+|||.+.. ..++.++||||||+++|||++ |+.||...+..+...++.+..-.+
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~------------ 225 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKD-GEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLP------------ 225 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHH-SEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETT------------
T ss_pred ccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccce------------
Confidence 11122345678999999876 558999999999999999999 789999887777776663321100
Q ss_pred ccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 365 ATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 365 ~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
....++..+.+||..||..||.+|||+.++++
T Consensus 226 ----------------~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 226 ----------------IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp ----------------SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred ----------------eccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 11357889999999999999999999999985
No 342
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.9e-39 Score=315.11 Aligned_cols=255 Identities=22% Similarity=0.323 Sum_probs=202.4
Q ss_pred ccccceeeeeeeeecCceEEEEEEEC-------CCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeeccee
Q 011763 127 LRADAFEKLEKIGQGTYSSVFRARDL-------DTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLI 198 (478)
Q Consensus 127 ~~~~~y~~~~~LG~G~~g~V~~~~~~-------~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~ 198 (478)
+..++|.+.+.||+|+||.||++++. .++..||+|++.... .......+.+|+.+++.+ +||||+++++++
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 90 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 90 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc-chHHHHHHHHHHHHHHhhccCCCchheeEEE
Confidence 33678999999999999999999752 234579999987442 344556788999999999 899999999998
Q ss_pred eecCCceEEEEEeeccCCchhhccCC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcE
Q 011763 199 TSRLSCSIYLVFEYMEHDITGLLSCP----------------DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNL 262 (478)
Q Consensus 199 ~~~~~~~~~lv~e~~~~~ll~~~~~~----------------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NI 262 (478)
.. ....|+||||+.++.+..+... ...++...+..++.||+.||.|||++||+||||||+||
T Consensus 91 ~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 168 (304)
T cd05101 91 TQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV 168 (304)
T ss_pred ec--CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence 77 5678999999997655443321 23578889999999999999999999999999999999
Q ss_pred EEecCCcEEEeecccccccCCCCCCC-ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 011763 263 LVNNEGVLKLADFGLANFSNTGHRQP-LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVE 340 (478)
Q Consensus 263 Ll~~~~~vkl~DFG~a~~~~~~~~~~-~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~ 340 (478)
|++.++.+||+|||+++......... .....+++.|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~ 247 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 247 (304)
T ss_pred EEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH
Confidence 99999999999999997664322111 122334678999999876 668999999999999999998 889998877666
Q ss_pred HHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 341 QLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 341 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
....+.... .. .....++..+.+||.+||..+|.+|||+.++|+.
T Consensus 248 ~~~~~~~~~--~~--------------------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 248 LFKLLKEGH--RM--------------------------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHHHHcCC--cC--------------------------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 555543210 00 0012567899999999999999999999999864
No 343
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=6.4e-39 Score=308.48 Aligned_cols=253 Identities=24% Similarity=0.420 Sum_probs=202.1
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecC---CCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFD---NFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~---~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
+|.+.+.||+|+||.||++.+..++..+++|+++.. .........+..|+.+++.++||||+++++++.+ ....+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~ 78 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLE--RDAFC 78 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhc--CCceE
Confidence 589999999999999999998877777777776532 2223333456679999999999999999999876 56689
Q ss_pred EEEeeccCCchhhcc----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCC
Q 011763 208 LVFEYMEHDITGLLS----CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNT 283 (478)
Q Consensus 208 lv~e~~~~~ll~~~~----~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~ 283 (478)
+||||++++.+..+. .....+++..++.++.||+.||.|||++|++|+||+|+||++++ +.++|+|||++.....
T Consensus 79 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~ 157 (260)
T cd08222 79 IITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMG 157 (260)
T ss_pred EEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCC
Confidence 999999986655432 23457899999999999999999999999999999999999975 6799999999876543
Q ss_pred CCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCC
Q 011763 284 GHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP 363 (478)
Q Consensus 284 ~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 363 (478)
.. .......+++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...........+... ..+
T Consensus 158 ~~-~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~---------- 223 (260)
T cd08222 158 SC-DLATTFTGTPYYMSPEALKH-QGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEG--PTP---------- 223 (260)
T ss_pred Cc-ccccCCCCCcCccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcC--CCC----------
Confidence 22 12223456888999998865 66788999999999999999999999877665555544321 111
Q ss_pred CccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 364 HATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 364 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
.....++.++.++|.+||..||++||++.++|+||||
T Consensus 224 ----------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 224 ----------------SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred ----------------CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 0012567889999999999999999999999999997
No 344
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.1e-38 Score=305.68 Aligned_cols=249 Identities=26% Similarity=0.368 Sum_probs=201.9
Q ss_pred eeeeeeeeecCceEEEEEEECCCC----cEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEE
Q 011763 132 FEKLEKIGQGTYSSVFRARDLDTG----KIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 132 y~~~~~LG~G~~g~V~~~~~~~~~----~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
|++.+.||.|+||.||++.+...+ ..||+|++..... ......+..|+.+++.++|+||+++++++.+ ....|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~ 77 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD-EQQIEEFLREARIMRKLDHPNIVKLLGVCTE--EEPLM 77 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC-hHHHHHHHHHHHHHHhcCCCchheEEEEEcC--CCeeE
Confidence 467889999999999999988766 8999999975532 2356678899999999999999999999877 46799
Q ss_pred EEEeeccCCchhhccCC-CCC-CCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC
Q 011763 208 LVFEYMEHDITGLLSCP-DIK-FSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH 285 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~-~~~-l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~ 285 (478)
++|||++++.+..+... ... +++..+..++.||+.||.|||+++++|+||||+||+++.++.++|+|||++.......
T Consensus 78 ~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 78 IVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred EEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 99999988655544433 323 8999999999999999999999999999999999999999999999999997665432
Q ss_pred CCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCC
Q 011763 286 RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 286 ~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 364 (478)
........+++.|+|||.+.+ ..++.++|||||||++|+|++ |.+||...+..+....+......
T Consensus 158 ~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~------------- 223 (258)
T smart00219 158 YYKKKGGKLPIRWMAPESLKD-GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRL------------- 223 (258)
T ss_pred ccccccCCCcccccChHHhcc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC-------------
Confidence 111112235788999998865 678999999999999999998 88999887766666554331100
Q ss_pred ccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 365 ATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 365 ~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
.....++.++.++|.+||..||++|||+.++++
T Consensus 224 ---------------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 224 ---------------PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred ---------------CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 001236888999999999999999999999985
No 345
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.7e-38 Score=303.53 Aligned_cols=244 Identities=24% Similarity=0.335 Sum_probs=195.0
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeeccC
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEH 215 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~~ 215 (478)
+.||+|+||.||++... ++..||+|++.... .......+.+|+.+++.++||||+++++++.. ....++||||+++
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~ 76 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDL-PQELKIKFLSEARILKQYDHPNIVKLIGVCTQ--RQPIYIVMELVPG 76 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEec--CCccEEEEECCCC
Confidence 36899999999999864 68899999987543 34444567889999999999999999999876 5678999999987
Q ss_pred Cchhhc-cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCcccccc
Q 011763 216 DITGLL-SCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVV 294 (478)
Q Consensus 216 ~ll~~~-~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~ 294 (478)
+.+..+ ......+++..+..++.||+.+|.|||++|++|+||||+||+++.++.+||+|||++...............+
T Consensus 77 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (250)
T cd05085 77 GDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI 156 (250)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCC
Confidence 655444 3344568999999999999999999999999999999999999999999999999986543322111122233
Q ss_pred CCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCC
Q 011763 295 TLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQP 373 (478)
Q Consensus 295 t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 373 (478)
+..|+|||++.+ ..++.++|||||||++|+|++ |..||...........+.... ..
T Consensus 157 ~~~y~aPE~~~~-~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~--~~-------------------- 213 (250)
T cd05085 157 PIKWTAPEALNY-GRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY--RM-------------------- 213 (250)
T ss_pred cccccCHHHhcc-CCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC--CC--------------------
Confidence 567999998875 668899999999999999998 999998877665554442210 00
Q ss_pred CCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 374 YDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 374 ~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
.....++..+.+|+.+||..+|++||++.++++
T Consensus 214 ------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 214 ------SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred ------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 011256789999999999999999999999985
No 346
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=7.3e-39 Score=312.50 Aligned_cols=269 Identities=23% Similarity=0.339 Sum_probs=198.8
Q ss_pred cceeeeeeeeecCceEEEEEEE----CCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCce
Q 011763 130 DAFEKLEKIGQGTYSSVFRARD----LDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCS 205 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~----~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 205 (478)
..|++++.||+|+||.||+++. ..++..||+|.++... .......+.+|+.+++.+.||||+++++++.......
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 4689999999999999999974 4568899999987543 3444567889999999999999999999887754567
Q ss_pred EEEEEeeccCCchhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 206 IYLVFEYMEHDITGLLS-CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
.++||||++++.+..+. .....+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++......
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 162 (284)
T ss_pred eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccC
Confidence 89999999886665554 33346899999999999999999999999999999999999999999999999999765432
Q ss_pred CC--CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCC
Q 011763 285 HR--QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL 362 (478)
Q Consensus 285 ~~--~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 362 (478)
.. .......++..|+|||++.+ ..++.++|||||||++|+|+++..|+..... ......+......... ..
T Consensus 163 ~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~ellt~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~ 235 (284)
T cd05079 163 KEYYTVKDDLDSPVFWYAPECLIQ-SKFYIASDVWSFGVTLYELLTYCDSESSPMT-----LFLKMIGPTHGQMTVT-RL 235 (284)
T ss_pred ccceeecCCCCCCccccCHHHhcc-CCCCccccchhhhhhhhhhhcCCCCCccccc-----hhhhhcccccccccHH-HH
Confidence 21 11122345677999999876 5688999999999999999998766543211 0111111111000000 00
Q ss_pred CCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 363 PHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
. ....... .......++..+.+||.+||+.||++|||+.++|++
T Consensus 236 ~--~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 236 V--RVLEEGK-----RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred H--HHHHcCc-----cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 0 0000000 000123578899999999999999999999999864
No 347
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.4e-38 Score=315.28 Aligned_cols=252 Identities=23% Similarity=0.331 Sum_probs=199.5
Q ss_pred ccceeeeeeeeecCceEEEEEEEC-------CCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeee
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDL-------DTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITS 200 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~-------~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 200 (478)
.++|.+.+.||+|+||.||++++. .....||+|.++... .......+.+|+.+++.+ +||||+++++++..
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 568999999999999999999753 234579999987543 344556678899999999 69999999999876
Q ss_pred cCCceEEEEEeeccCCchhhccCC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEE
Q 011763 201 RLSCSIYLVFEYMEHDITGLLSCP----------------DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLV 264 (478)
Q Consensus 201 ~~~~~~~lv~e~~~~~ll~~~~~~----------------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl 264 (478)
...+|+||||+.++.+..+... ...+++..+..++.||+.||.|||++||+|+||||+|||+
T Consensus 90 --~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill 167 (314)
T cd05099 90 --EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV 167 (314)
T ss_pred --CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEE
Confidence 5678999999997655443321 2358899999999999999999999999999999999999
Q ss_pred ecCCcEEEeecccccccCCCCCC-CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 011763 265 NNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQL 342 (478)
Q Consensus 265 ~~~~~vkl~DFG~a~~~~~~~~~-~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~ 342 (478)
+.++.+||+|||+++........ ......++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+.+
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~ 246 (314)
T cd05099 168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFD-RVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELF 246 (314)
T ss_pred cCCCcEEEccccccccccccccccccccCCCCccccCHHHHcc-CCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 99999999999999765432111 1111223467999999876 678999999999999999999 89999887766655
Q ss_pred HHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 343 HKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 343 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
..+.... .. .....++.++.+||.+||..||.+|||+.++++
T Consensus 247 ~~~~~~~--~~--------------------------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 247 KLLREGH--RM--------------------------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHHHcCC--CC--------------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 5543210 00 001256788999999999999999999999884
No 348
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=6.3e-39 Score=339.33 Aligned_cols=280 Identities=22% Similarity=0.310 Sum_probs=186.6
Q ss_pred ccccceeeeeeeeecCceEEEEEEECCC----CcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceee---
Q 011763 127 LRADAFEKLEKIGQGTYSSVFRARDLDT----GKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLIT--- 199 (478)
Q Consensus 127 ~~~~~y~~~~~LG~G~~g~V~~~~~~~~----~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~--- 199 (478)
...++|++.+.||+|+||.||+|++..+ +..||+|++..... .+....| .+....+.+++.++..+.
T Consensus 129 ~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~----~e~~~~e--~l~~~~~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 129 FKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA----VEIWMNE--RVRRACPNSCADFVYGFLEPV 202 (566)
T ss_pred CccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch----hHHHHHH--HHHhhchhhHHHHHHhhhccc
Confidence 3578999999999999999999999888 89999998763221 1111111 122222333333322211
Q ss_pred -ecCCceEEEEEeeccCCchhhccCCC-C-------------------CCCHHHHHHHHHHHHHHHHHHHhCCceeccCC
Q 011763 200 -SRLSCSIYLVFEYMEHDITGLLSCPD-I-------------------KFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIK 258 (478)
Q Consensus 200 -~~~~~~~~lv~e~~~~~ll~~~~~~~-~-------------------~l~~~~~~~i~~qil~aL~~LH~~givHrDlk 258 (478)
......++|||||++++.+..+.... . ...+..+..++.||+.||.|||+++|+|||||
T Consensus 203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLK 282 (566)
T PLN03225 203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVK 282 (566)
T ss_pred ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCC
Confidence 12356789999999986554443221 1 11234567899999999999999999999999
Q ss_pred CCcEEEec-CCcEEEeecccccccCCCCCCCccccccCCcccCcccccCCC---------------------CCCChhhH
Q 011763 259 GSNLLVNN-EGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGAT---------------------DYGPSVDL 316 (478)
Q Consensus 259 p~NILl~~-~~~vkl~DFG~a~~~~~~~~~~~~~~~~t~~y~APE~l~~~~---------------------~~~~~~Di 316 (478)
|+||||+. ++.+||+|||+|+..............+++.|+|||.+.... .++.++||
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV 362 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI 362 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence 99999996 579999999999865443333345567899999999764211 23456799
Q ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHh
Q 011763 317 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL 396 (478)
Q Consensus 317 wslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~m 396 (478)
|||||+||||+++.. ...+....+..++...+..... |.....+. ..+. .....+.+........+||.+|
T Consensus 363 wSlGviL~el~~~~~--~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~---~~~~---~~~~~~~~d~~~~~~~dLi~~m 433 (566)
T PLN03225 363 YSAGLIFLQMAFPNL--RSDSNLIQFNRQLKRNDYDLVA-WRKLVEPR---ASPD---LRRGFEVLDLDGGAGWELLKSM 433 (566)
T ss_pred HHHHHHHHHHHhCcC--CCchHHHHHHHHHHhcCCcHHH-HHHhhccc---cchh---hhhhhhhccccchHHHHHHHHH
Confidence 999999999998654 4445555555555544433222 21110000 0000 0001112233455677999999
Q ss_pred cCCCCCCccCHHHHHhCcccCCCCC
Q 011763 397 LSVEPYKRATASAALASEYFSTKPY 421 (478)
Q Consensus 397 L~~dP~~R~ta~e~L~hp~f~~~~~ 421 (478)
|++||.+|||+.|+|+||||+....
T Consensus 434 L~~dP~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 434 MRFKGRQRISAKAALAHPYFDREGL 458 (566)
T ss_pred ccCCcccCCCHHHHhCCcCcCCCCc
Confidence 9999999999999999999987543
No 349
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=9.2e-39 Score=312.36 Aligned_cols=252 Identities=25% Similarity=0.379 Sum_probs=199.8
Q ss_pred ccceeeeeeeeecCceEEEEEEEC-----CCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDL-----DTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS 203 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~-----~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 203 (478)
.++|++.+.||.|+||.||++.+. .++..||+|++.... .......+.+|+.+++.++||||+++++++.. +
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~--~ 80 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDHPNIVKLLGVCAV--G 80 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc-CHHHHHHHHHHHHHHHhcCCCchheEEEEEcC--C
Confidence 568999999999999999999874 367889999987543 34445668889999999999999999998876 5
Q ss_pred ceEEEEEeeccCCchhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCc
Q 011763 204 CSIYLVFEYMEHDITGLLSCP----------------------DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSN 261 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~----------------------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~N 261 (478)
...|+||||++++.+..+... ...+++..++.++.||+.||.|||+++++||||||+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n 160 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN 160 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh
Confidence 678999999997554433321 1247888999999999999999999999999999999
Q ss_pred EEEecCCcEEEeecccccccCCCCC-CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChH
Q 011763 262 LLVNNEGVLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEV 339 (478)
Q Consensus 262 ILl~~~~~vkl~DFG~a~~~~~~~~-~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~ 339 (478)
||++.++.++|+|||++........ ........+..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~ 239 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE 239 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhc-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 9999999999999999875432211 11122234667999998876 678999999999999999997 88899877766
Q ss_pred HHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 340 EQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 340 ~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
+....+.... .. .....++.++.+||.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~--~~--------------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 240 EVIYYVRDGN--VL--------------------------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHHHHhcCC--CC--------------------------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 6555443210 00 001246788999999999999999999999874
No 350
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=327.74 Aligned_cols=255 Identities=23% Similarity=0.347 Sum_probs=210.7
Q ss_pred ccccceeeeeeeeecCceEEEEEEECCCCc---E-EEEEEeecC-CCChHHHHHHHHHHHHHHhcCCCCeeeecceeeec
Q 011763 127 LRADAFEKLEKIGQGTYSSVFRARDLDTGK---I-VALKKVRFD-NFEPESVRFMAREILILRRLDHPNIIKLEGLITSR 201 (478)
Q Consensus 127 ~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~---~-vAlK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 201 (478)
+..++-.+.++||+|+||.||+|.....+. . ||+|..+.+ ....+....+.+|+++|+.++|||||+++|++..
T Consensus 154 l~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~- 232 (474)
T KOG0194|consen 154 LSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVL- 232 (474)
T ss_pred EeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcC-
Confidence 345677778999999999999998764322 3 899999863 3577888899999999999999999999999988
Q ss_pred CCceEEEEEeeccCCchhhccCCCC-CCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccc
Q 011763 202 LSCSIYLVFEYMEHDITGLLSCPDI-KFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANF 280 (478)
Q Consensus 202 ~~~~~~lv~e~~~~~ll~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~ 280 (478)
...+|||||+|.|+.+..++.... .++..+...++.+.+.||+|||++++|||||-..|+|++.++.+||+|||+++.
T Consensus 233 -~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 233 -EEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRA 311 (474)
T ss_pred -CCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccC
Confidence 567999999999876665555444 699999999999999999999999999999999999999999999999999976
Q ss_pred cCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhcc
Q 011763 281 SNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKK 359 (478)
Q Consensus 281 ~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~ 359 (478)
....... ......+..|+|||.+.. ..|+.++|||||||++||+++ |..||.+....+...+|.......+.
T Consensus 312 ~~~~~~~-~~~~klPirWLAPEtl~~-~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~----- 384 (474)
T KOG0194|consen 312 GSQYVMK-KFLKKLPIRWLAPETLNT-GIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPI----- 384 (474)
T ss_pred Ccceeec-cccccCcceecChhhhcc-CccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCC-----
Confidence 5421111 112234778999999986 589999999999999999999 88999999999988888542211110
Q ss_pred CCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 360 SKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
....|.++..++.+|+..||+.|||+.++.+
T Consensus 385 ----------------------~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 385 ----------------------PSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred ----------------------CCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 0246778899999999999999999998863
No 351
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.4e-38 Score=304.25 Aligned_cols=244 Identities=25% Similarity=0.355 Sum_probs=195.7
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeeccC
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEH 215 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~~ 215 (478)
++||.|+||.||++.+.. ++.||+|++...... .....+.+|++++++++|+||+++++++.. ....++||||+.+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v~e~~~~ 76 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQ--KQPIYIVMELVPG 76 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEec--CCCeEEEEEcCCC
Confidence 468999999999999877 999999998765433 455678899999999999999999999877 5678999999987
Q ss_pred Cchh-hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCc-cccc
Q 011763 216 DITG-LLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL-TSRV 293 (478)
Q Consensus 216 ~ll~-~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~-~~~~ 293 (478)
+.+. .+......+++..+..++.|++.+|.|||+++++||||||+|||++.++.++|+|||++........... ....
T Consensus 77 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (251)
T cd05041 77 GSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQ 156 (251)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCc
Confidence 5444 4434445789999999999999999999999999999999999999999999999999975542211111 1122
Q ss_pred cCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCC
Q 011763 294 VTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQ 372 (478)
Q Consensus 294 ~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 372 (478)
.+..|+|||++.+ ..++.++|||||||++|+|++ |..||...........+......+
T Consensus 157 ~~~~y~~PE~~~~-~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~-------------------- 215 (251)
T cd05041 157 IPIKWTAPEALNY-GRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMP-------------------- 215 (251)
T ss_pred ceeccCChHhhcc-CCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCC--------------------
Confidence 3567999998876 678999999999999999999 889998777655444432211000
Q ss_pred CCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 373 PYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 373 ~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
....++..+.+||.+||..+|.+|||+.|+|+
T Consensus 216 --------~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 216 --------APQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred --------CCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 01246788999999999999999999999985
No 352
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.5e-40 Score=340.55 Aligned_cols=253 Identities=26% Similarity=0.391 Sum_probs=212.9
Q ss_pred ccccceeeeeeeeecCceEEEEEEEC-----CCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeec
Q 011763 127 LRADAFEKLEKIGQGTYSSVFRARDL-----DTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSR 201 (478)
Q Consensus 127 ~~~~~y~~~~~LG~G~~g~V~~~~~~-----~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 201 (478)
+...+.+..+.||+|+||+||+|+.. .....||||.++.+. +.+....|.+|+++|..|+|||||+|+|+|..
T Consensus 483 i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a-~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~- 560 (774)
T KOG1026|consen 483 IPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA-ENQARQDFRREAELLAELQHPNIVRLLGVCRE- 560 (774)
T ss_pred echhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc-cHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc-
Confidence 44667888999999999999999753 345689999998554 45577889999999999999999999999988
Q ss_pred CCceEEEEEeeccCCchhhccC----------C----CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecC
Q 011763 202 LSCSIYLVFEYMEHDITGLLSC----------P----DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE 267 (478)
Q Consensus 202 ~~~~~~lv~e~~~~~ll~~~~~----------~----~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~ 267 (478)
++.+|||+|||..+.|..++. . ..+|+..+...|+.||+.|+.||-++.+|||||-..|+||.++
T Consensus 561 -~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 561 -GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN 639 (774)
T ss_pred -CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc
Confidence 778999999999765554432 1 2248899999999999999999999999999999999999999
Q ss_pred CcEEEeecccccccCCCCCCCcc-ccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 011763 268 GVLKLADFGLANFSNTGHRQPLT-SRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKI 345 (478)
Q Consensus 268 ~~vkl~DFG~a~~~~~~~~~~~~-~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i 345 (478)
..|||+|||+++.....+..... ....+..|||||.|+- ..|+.++|||||||+|||+++ |+.|+.+.++.+.++.|
T Consensus 640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly-~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i 718 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILY-GKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECI 718 (774)
T ss_pred eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhc-CcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHH
Confidence 99999999999865543322222 3455889999999986 789999999999999999998 99999999999999888
Q ss_pred HHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHH
Q 011763 346 FKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAAL 411 (478)
Q Consensus 346 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L 411 (478)
.+. .+.....+.|.++.+|+..|++.+|.+||+.+||-
T Consensus 719 ~~g----------------------------~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 719 RAG----------------------------QLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred HcC----------------------------CcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 542 11222357899999999999999999999999873
No 353
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.4e-38 Score=309.62 Aligned_cols=254 Identities=19% Similarity=0.260 Sum_probs=201.5
Q ss_pred cccceeeeeeeeecCceEEEEEEECC----CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC
Q 011763 128 RADAFEKLEKIGQGTYSSVFRARDLD----TGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS 203 (478)
Q Consensus 128 ~~~~y~~~~~LG~G~~g~V~~~~~~~----~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 203 (478)
..++|++.+.||+|+||.||+|.+.. ++..|++|++... ........+.+|+.+|+.++|+||+++++++... .
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~-~ 81 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH-ASEIQVTLLLQESCLLYGLSHQNILPILHVCIED-G 81 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC-C
Confidence 36789999999999999999999865 3578999988643 3455567788999999999999999999987653 4
Q ss_pred ceEEEEEeeccCCchhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeec
Q 011763 204 CSIYLVFEYMEHDITGLLSCP--------DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADF 275 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~--------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DF 275 (478)
...++++||+.++.+..+... ...+++..+..++.||+.||.|||+++++|+||||+||++++++.+||+||
T Consensus 82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCC
Confidence 568899999987555444321 145899999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCC-ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCC
Q 011763 276 GLANFSNTGHRQP-LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPP 353 (478)
Q Consensus 276 G~a~~~~~~~~~~-~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~ 353 (478)
|+++......... .....++..|+|||++.+ ..++.++|||||||++|+|++ |++||...+..+....+.... .++
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~ 239 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVN-KEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGY-RLA 239 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhc-CCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCC-CCC
Confidence 9997654322111 122334667999999876 668999999999999999999 999998876655443332210 000
Q ss_pred chhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 354 DDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
....+++++.++|.+||..||++|||+.++++
T Consensus 240 ---------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 240 ---------------------------QPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred ---------------------------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 01246788999999999999999999999984
No 354
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.5e-38 Score=317.93 Aligned_cols=254 Identities=21% Similarity=0.307 Sum_probs=200.6
Q ss_pred cccceeeeeeeeecCceEEEEEEECC-------CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceee
Q 011763 128 RADAFEKLEKIGQGTYSSVFRARDLD-------TGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLIT 199 (478)
Q Consensus 128 ~~~~y~~~~~LG~G~~g~V~~~~~~~-------~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~ 199 (478)
...+|++.+.||+|+||.||++++.. ....||+|++.... .......+.+|+.+++++ +||||+++++++.
T Consensus 10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (334)
T cd05100 10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA-TDKDLSDLVSEMEMMKMIGKHKNIINLLGACT 88 (334)
T ss_pred CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc
Confidence 35579999999999999999998643 22368999887432 344566788899999999 8999999999987
Q ss_pred ecCCceEEEEEeeccCCchhhccCC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEE
Q 011763 200 SRLSCSIYLVFEYMEHDITGLLSCP----------------DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLL 263 (478)
Q Consensus 200 ~~~~~~~~lv~e~~~~~ll~~~~~~----------------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NIL 263 (478)
. ...+|++|||++++.+..+... ...++...+..++.||+.||.|||++||+||||||+|||
T Consensus 89 ~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nil 166 (334)
T cd05100 89 Q--DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVL 166 (334)
T ss_pred c--CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEE
Confidence 7 5679999999988655444321 234788889999999999999999999999999999999
Q ss_pred EecCCcEEEeecccccccCCCCCC-CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 011763 264 VNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQ 341 (478)
Q Consensus 264 l~~~~~vkl~DFG~a~~~~~~~~~-~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~ 341 (478)
++.++.+||+|||+++........ ......++..|+|||++.+ ..++.++|||||||++|||++ |..||.+.+..+.
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~ 245 (334)
T cd05100 167 VTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL 245 (334)
T ss_pred EcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhcc-CCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence 999999999999999765432111 1112233567999999876 678899999999999999998 8899988776665
Q ss_pred HHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 342 LHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 342 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
...+..... + ......+.++.+||.+||+.+|.+|||+.++|++
T Consensus 246 ~~~~~~~~~--~--------------------------~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 246 FKLLKEGHR--M--------------------------DKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHHHHcCCC--C--------------------------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 555432110 0 0012467789999999999999999999999976
No 355
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.6e-38 Score=324.43 Aligned_cols=254 Identities=21% Similarity=0.261 Sum_probs=199.3
Q ss_pred ccceeeeeeeeecCceEEEEEEEC-----CCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcC-CCCeeeecceeeecC
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDL-----DTGKIVALKKVRFDNFEPESVRFMAREILILRRLD-HPNIIKLEGLITSRL 202 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~-----~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~ 202 (478)
.++|.+.+.||+|+||.||+|++. .+++.||||+++... .......+.+|+.+|.++. ||||+++++++..
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~-- 112 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA-RSSEKQALMSELKIMSHLGPHLNIVNLLGACTK-- 112 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC-ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc--
Confidence 568999999999999999999853 345689999997543 2333456788999999997 9999999999877
Q ss_pred CceEEEEEeeccCCchhhccCC----------------------------------------------------------
Q 011763 203 SCSIYLVFEYMEHDITGLLSCP---------------------------------------------------------- 224 (478)
Q Consensus 203 ~~~~~lv~e~~~~~ll~~~~~~---------------------------------------------------------- 224 (478)
...+|+||||+.++.+..+...
T Consensus 113 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (401)
T cd05107 113 GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPM 192 (401)
T ss_pred CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccch
Confidence 5679999999997654433211
Q ss_pred ----------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEE
Q 011763 225 ----------------------------------------DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLV 264 (478)
Q Consensus 225 ----------------------------------------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl 264 (478)
...+++..+..++.||+.||.|||+++|+||||||+|||+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl 272 (401)
T cd05107 193 QDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLI 272 (401)
T ss_pred hcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEE
Confidence 1236777889999999999999999999999999999999
Q ss_pred ecCCcEEEeecccccccCCCCC-CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 011763 265 NNEGVLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQL 342 (478)
Q Consensus 265 ~~~~~vkl~DFG~a~~~~~~~~-~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~ 342 (478)
++++.+||+|||+++....... .......++..|+|||++.+ ..++.++|||||||++|||++ |..||......+.+
T Consensus 273 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~ 351 (401)
T cd05107 273 CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFN-NLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQF 351 (401)
T ss_pred eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcC-CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHH
Confidence 9999999999999975432211 11223356788999999876 668999999999999999998 89999876655554
Q ss_pred HHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 343 HKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 343 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
...+.....++ ....++.++.+||.+||..||.+||++.++|..
T Consensus 352 ~~~~~~~~~~~---------------------------~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 352 YNAIKRGYRMA---------------------------KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred HHHHHcCCCCC---------------------------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 44332110000 012467899999999999999999999999864
No 356
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.7e-38 Score=306.59 Aligned_cols=239 Identities=18% Similarity=0.238 Sum_probs=186.8
Q ss_pred eeeeecCceEEEEEEECC------------CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC
Q 011763 136 EKIGQGTYSSVFRARDLD------------TGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS 203 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~------------~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 203 (478)
+.||+|+||.||+|+... ....|++|++.... ......+.+|+.++..++||||+++++++.. .
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~--~ 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVR--D 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEec--C
Confidence 368999999999997432 23368899876432 3344567789999999999999999999876 5
Q ss_pred ceEEEEEeeccCCchhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCc-------EEEeec
Q 011763 204 CSIYLVFEYMEHDITGLLSC-PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGV-------LKLADF 275 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~-------vkl~DF 275 (478)
...++||||++++.+..+.. ....+++..+..++.||+.||.|||+++|+||||||+||||+.++. ++|+||
T Consensus 77 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 77 VENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred CCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 56799999999877665554 3456899999999999999999999999999999999999987664 899999
Q ss_pred ccccccCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHcCCCCc
Q 011763 276 GLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELL-IGKPILQGRTEVEQLHKIFKLCGSPPD 354 (478)
Q Consensus 276 G~a~~~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ell-tG~~pf~~~~~~~~~~~i~~~~g~~~~ 354 (478)
|++...... ....++..|+|||++.....++.++|||||||++|+|+ .|..||......+.. .+.... .
T Consensus 157 g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~~~--~-- 226 (262)
T cd05077 157 GIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYEGQ--C-- 226 (262)
T ss_pred CCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHhcC--c--
Confidence 998654321 23456788999998875567899999999999999998 588888765543322 111100 0
Q ss_pred hhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 355 DYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
......+.++.+||.+||+.||.+||++.++|++
T Consensus 227 -------------------------~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 227 -------------------------MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred -------------------------cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 0011345678999999999999999999999964
No 357
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2.4e-38 Score=304.48 Aligned_cols=243 Identities=20% Similarity=0.258 Sum_probs=192.4
Q ss_pred eeeecCceEEEEEEEC--CCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeecc
Q 011763 137 KIGQGTYSSVFRARDL--DTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYME 214 (478)
Q Consensus 137 ~LG~G~~g~V~~~~~~--~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~ 214 (478)
.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.++++++|+||+++++++.. ...++||||++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~---~~~~lv~e~~~ 77 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA---EALMLVMEMAS 77 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC---CCeEEEEEeCC
Confidence 3899999999999764 445679999987543 34445678899999999999999999998753 46899999998
Q ss_pred CCchhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC--ccc
Q 011763 215 HDITGLLS-CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP--LTS 291 (478)
Q Consensus 215 ~~ll~~~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~--~~~ 291 (478)
++.+..+. .....+++..++.++.||+.||.|||++|++|+||||+|||++.++.+||+|||++.......... ...
T Consensus 78 ~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05115 78 GGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSA 157 (257)
T ss_pred CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCC
Confidence 76555443 345578999999999999999999999999999999999999999999999999997544322111 111
Q ss_pred cccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCC
Q 011763 292 RVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKP 370 (478)
Q Consensus 292 ~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 370 (478)
...+..|+|||++.+ ..++.++|||||||++|+|++ |..||......+....+... ..+
T Consensus 158 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~--~~~----------------- 217 (257)
T cd05115 158 GKWPLKWYAPECINF-RKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQG--KRL----------------- 217 (257)
T ss_pred CCCCcccCCHHHHcc-CCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC--CCC-----------------
Confidence 222568999998875 568899999999999999996 99999887766655444221 100
Q ss_pred CCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 371 QQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 371 ~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
......++++.+||.+||..||++||++.++++
T Consensus 218 ---------~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 218 ---------DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred ---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 001246789999999999999999999999864
No 358
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.6e-38 Score=308.72 Aligned_cols=238 Identities=20% Similarity=0.263 Sum_probs=186.1
Q ss_pred eeeecCceEEEEEEECC------------------------CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCee
Q 011763 137 KIGQGTYSSVFRARDLD------------------------TGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNII 192 (478)
Q Consensus 137 ~LG~G~~g~V~~~~~~~------------------------~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv 192 (478)
+||+|+||.||++.... ....||+|++.... ......+.+|+.+++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHHHHHHHHhcCCCCCee
Confidence 68999999999997422 22458899886432 23345677899999999999999
Q ss_pred eecceeeecCCceEEEEEeeccCCchhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCC---
Q 011763 193 KLEGLITSRLSCSIYLVFEYMEHDITGLLSC-PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG--- 268 (478)
Q Consensus 193 ~l~~~~~~~~~~~~~lv~e~~~~~ll~~~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~--- 268 (478)
++++++.. ....||||||++++.+..+.. ....+++..+..++.||+.||+|||+++|+||||||+|||++..+
T Consensus 80 ~~~~~~~~--~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 80 FVHGVCVR--GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred eEEEEEEe--CCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence 99999987 567899999999877665553 455789999999999999999999999999999999999998654
Q ss_pred ----cEEEeecccccccCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHH-hCCCCCCCCChHHHHH
Q 011763 269 ----VLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELL-IGKPILQGRTEVEQLH 343 (478)
Q Consensus 269 ----~vkl~DFG~a~~~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ell-tG~~pf~~~~~~~~~~ 343 (478)
.+||+|||++...... ....++..|+|||.+.+...++.++|||||||++|||+ +|..||......+...
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~ 232 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKER 232 (274)
T ss_pred CccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHH
Confidence 3899999988543221 22345778999998876567899999999999999995 6999998765544322
Q ss_pred HHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 344 KIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 344 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
+....... ....+..+.+||.+||+.+|++|||+.++|++
T Consensus 233 -~~~~~~~~-----------------------------~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 233 -FYEKKHRL-----------------------------PEPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred -HHHhccCC-----------------------------CCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 21110000 01234678999999999999999999999964
No 359
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2.6e-38 Score=303.58 Aligned_cols=245 Identities=24% Similarity=0.329 Sum_probs=196.8
Q ss_pred eeeeecCceEEEEEEECC-CCc--EEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEee
Q 011763 136 EKIGQGTYSSVFRARDLD-TGK--IVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEY 212 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~-~~~--~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~ 212 (478)
+.||+|++|.||++.+.. .++ .||||.+..+... ...+.+.+|+.++++++||||+++++++.. ...++||||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~v~e~ 76 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT---HPLMMVTEL 76 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC---CeEEEEEEe
Confidence 468999999999998755 333 6999999876544 566778899999999999999999998876 678999999
Q ss_pred ccCCchh-hccCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCC--C
Q 011763 213 MEHDITG-LLSCPD-IKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ--P 288 (478)
Q Consensus 213 ~~~~ll~-~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~--~ 288 (478)
++++.+. .+.... ..+++..++.++.||+.||.|||+++++|+||||+||+++.++.+||+|||++......... .
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 77 APLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred cCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence 9875444 443333 46899999999999999999999999999999999999999999999999999765432111 1
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATL 367 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 367 (478)
.....++..|+|||++.+ ..++.++|||||||++|+|++ |+.||...+..+....+.......+
T Consensus 157 ~~~~~~~~~y~~pE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~-------------- 221 (257)
T cd05040 157 EEHLKVPFAWCAPESLRT-RTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLE-------------- 221 (257)
T ss_pred ccCCCCCceecCHHHhcc-cCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCC--------------
Confidence 112345778999998875 668999999999999999998 9999988777776665543110000
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
....++..+.+|+.+||..+|.+|||+.++++
T Consensus 222 -------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 222 -------------RPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred -------------CCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 01246788999999999999999999999985
No 360
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=3.6e-38 Score=303.49 Aligned_cols=248 Identities=22% Similarity=0.353 Sum_probs=197.7
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|++.++||+|+||.||++.+. .+..+|+|.+.... .....+.+|+.+++.++|+||+++++++.. ...++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~ 77 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVTK---EPIYI 77 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh---hHHHHHHHHHHHHHhcCCCCcceEEEEEcC---CCeEE
Confidence 568999999999999999999864 45679999886432 334567889999999999999999988765 45799
Q ss_pred EEeeccCCch-hhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 209 VFEYMEHDIT-GLLSC-PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 209 v~e~~~~~ll-~~~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
+|||++++.+ ..+.. ....+++..+..++.||+.||.|||+.|++|+||||+||+++.++.+||+|||++........
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 157 (260)
T cd05073 78 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 157 (260)
T ss_pred EEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc
Confidence 9999987544 44433 234578889999999999999999999999999999999999999999999999976543222
Q ss_pred CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 287 QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 287 ~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
.......++..|+|||++.. ..++.++|||||||++|+|++ |+.||...+..+....+......
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~-------------- 222 (260)
T cd05073 158 TAREGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM-------------- 222 (260)
T ss_pred ccccCCcccccccCHhHhcc-CCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCC--------------
Confidence 22222334667999999876 668899999999999999998 99999987766555544321100
Q ss_pred cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 366 TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
.....++.++.+++.+||+.||++||++.++++
T Consensus 223 --------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 223 --------------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred --------------CCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 011356788999999999999999999998863
No 361
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=3.1e-38 Score=310.07 Aligned_cols=259 Identities=20% Similarity=0.290 Sum_probs=197.3
Q ss_pred ccceeeeeeeeecCceEEEEEEECC----------------CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCee
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLD----------------TGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNII 192 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~----------------~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv 192 (478)
.++|++.+.||+|+||.||++.+.. +...||+|++.... .......+.+|+.+|+.++|+||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-NKNARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcc
Confidence 3579999999999999999986432 34579999987543 344456788999999999999999
Q ss_pred eecceeeecCCceEEEEEeeccCCchhhccCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCc
Q 011763 193 KLEGLITSRLSCSIYLVFEYMEHDITGLLSCP-----------DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSN 261 (478)
Q Consensus 193 ~l~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~-----------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~N 261 (478)
++++++.. ....|+||||+.++.+..+... ...+++..+..++.||+.||+|||++||+|+||||+|
T Consensus 83 ~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~N 160 (296)
T cd05095 83 RLLAVCIT--SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRN 160 (296)
T ss_pred eEEEEEec--CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChhe
Confidence 99999877 5678999999987555443221 1247788999999999999999999999999999999
Q ss_pred EEEecCCcEEEeecccccccCCCCCCC-ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh--CCCCCCCCCh
Q 011763 262 LLVNNEGVLKLADFGLANFSNTGHRQP-LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI--GKPILQGRTE 338 (478)
Q Consensus 262 ILl~~~~~vkl~DFG~a~~~~~~~~~~-~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt--G~~pf~~~~~ 338 (478)
||++.++.++|+|||++.......... ......+..|+|||++.+ ..++.++|||||||++|||++ |..||...+.
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILL-GKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD 239 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhc-CCccchhhhhHHHHHHHHHHHhCCCCCccccCh
Confidence 999999999999999997553322111 122233678999998776 568999999999999999998 7789987766
Q ss_pred HHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 339 VEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 339 ~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
.+.+.......... +. .... .....++..+.+||.+||..||.+||++.++++
T Consensus 240 ~~~~~~~~~~~~~~----~~-------~~~~----------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 240 EQVIENTGEFFRDQ----GR-------QVYL----------PKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHHHHHhhc----cc-------cccC----------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 55544332211000 00 0000 001246788999999999999999999999874
No 362
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=9.4e-39 Score=307.35 Aligned_cols=239 Identities=20% Similarity=0.240 Sum_probs=187.3
Q ss_pred eeeeecCceEEEEEEECCCCc-------EEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 136 EKIGQGTYSSVFRARDLDTGK-------IVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~-------~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
+.||.|+||.||+|.+...+. .||+|.+.... ....+.+.+|+.+++.++||||+++++++.. ....++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~--~~~~~l 76 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVC--GDESIM 76 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEe--CCCcEE
Confidence 368999999999998765443 48888875432 3444567789999999999999999999987 567899
Q ss_pred EEeeccCCchhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCc--------EEEeeccccc
Q 011763 209 VFEYMEHDITGLLS-CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGV--------LKLADFGLAN 279 (478)
Q Consensus 209 v~e~~~~~ll~~~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~--------vkl~DFG~a~ 279 (478)
||||++++.+..+. .....+++..+..++.||+.||.|||++||+||||||+|||++.++. ++|+|||++.
T Consensus 77 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 77 VQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred EEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 99999987665554 44446899999999999999999999999999999999999988765 6999999986
Q ss_pred ccCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCC-CCCCCCChHHHHHHHHHHcCCCCchhhc
Q 011763 280 FSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGK-PILQGRTEVEQLHKIFKLCGSPPDDYWK 358 (478)
Q Consensus 280 ~~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~-~pf~~~~~~~~~~~i~~~~g~~~~~~~~ 358 (478)
..... ....++..|+|||++.+...++.++|||||||++|+|++|. +||...+....... .......
T Consensus 157 ~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~-~~~~~~~------ 224 (258)
T cd05078 157 TVLPK-----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQF-YEDRHQL------ 224 (258)
T ss_pred ccCCc-----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHH-HHccccC------
Confidence 54321 23456788999999976556889999999999999999984 67665554433221 1110000
Q ss_pred cCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 359 KSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
....+.++.+||.+||+.||++|||+.++|+.
T Consensus 225 -----------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 225 -----------------------PAPKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred -----------------------CCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 01345678999999999999999999999863
No 363
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=5.7e-38 Score=303.42 Aligned_cols=251 Identities=24% Similarity=0.429 Sum_probs=202.2
Q ss_pred ceeeeeeeeecCceEEEEEEECC-CCcEEEEEEeecCC--------CChHHHHHHHHHHHHHHh-cCCCCeeeecceeee
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLD-TGKIVALKKVRFDN--------FEPESVRFMAREILILRR-LDHPNIIKLEGLITS 200 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~-~~~~vAlK~~~~~~--------~~~~~~~~~~~E~~~l~~-l~h~nIv~l~~~~~~ 200 (478)
.|++.+.||+|+||.||++.+.. +++.+|+|.+.... ........+.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48899999999999999999877 68899999886432 123344556778988875 699999999999877
Q ss_pred cCCceEEEEEeeccCCchhhc----cCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCcEEEecCCcEEEeec
Q 011763 201 RLSCSIYLVFEYMEHDITGLL----SCPDIKFSEAQIKCYMNQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEGVLKLADF 275 (478)
Q Consensus 201 ~~~~~~~lv~e~~~~~ll~~~----~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~vkl~DF 275 (478)
....|+||||++++.+..+ ......+++..++.++.||+.+|.|||+ .+|+|+||+|+|||++.++.++|+||
T Consensus 81 --~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 --NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred --CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecc
Confidence 6789999999987554433 2344578999999999999999999996 68999999999999999999999999
Q ss_pred ccccccCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCch
Q 011763 276 GLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDD 355 (478)
Q Consensus 276 G~a~~~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~ 355 (478)
|++....... ......++..|+|||++.+ ..++.++||||||+++|+|++|++||...........+......+..
T Consensus 159 g~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~- 234 (269)
T cd08528 159 GLAKQKQPES--KLTSVVGTILYSCPEIVKN-EPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLP- 234 (269)
T ss_pred cceeeccccc--ccccccCcccCcChhhhcC-CCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCC-
Confidence 9997654432 2344567889999999876 66899999999999999999999999877666555554432211100
Q ss_pred hhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 356 YWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
...++..+.+||.+||..||++||++.|+..+
T Consensus 235 --------------------------~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 235 --------------------------EGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred --------------------------cccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 02467889999999999999999999998754
No 364
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=6.3e-38 Score=305.03 Aligned_cols=250 Identities=21% Similarity=0.344 Sum_probs=199.8
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCc----EEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCc
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGK----IVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSC 204 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~----~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 204 (478)
..+|++.+.||+|+||+||+|.+..++. .||+|.+.... .......+.+|+.++++++||||+++++++.. .
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~ 81 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET-SPKANKEILDEAYVMASVDHPHVVRLLGICLS---S 81 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec---C
Confidence 4689999999999999999999876654 58999887554 24455677889999999999999999998875 5
Q ss_pred eEEEEEeeccCCch-hhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCC
Q 011763 205 SIYLVFEYMEHDIT-GLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNT 283 (478)
Q Consensus 205 ~~~lv~e~~~~~ll-~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~ 283 (478)
..++||||++++.+ ..+......+++..+..++.||+.||+|||+++|+|+||||+|||+++++.+||+|||+++....
T Consensus 82 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 82 QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred ceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 68999999987544 44444455699999999999999999999999999999999999999999999999999976553
Q ss_pred CCCCC-ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCC
Q 011763 284 GHRQP-LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK 361 (478)
Q Consensus 284 ~~~~~-~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 361 (478)
..... ......+..|+|||.+.. ..++.++|||||||++|||++ |+.||.+....+....+... ...+.
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~------- 232 (279)
T cd05057 162 DEKEYHAEGGKVPIKWMALESILH-RIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG-ERLPQ------- 232 (279)
T ss_pred cccceecCCCcccccccCHHHhhc-CCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCC-CCCCC-------
Confidence 22111 111223567999998865 678899999999999999998 99999887765554444321 11100
Q ss_pred CCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHH
Q 011763 362 LPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAAL 411 (478)
Q Consensus 362 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L 411 (478)
....+.++.++|.+||..||.+|||+.+++
T Consensus 233 --------------------~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~ 262 (279)
T cd05057 233 --------------------PPICTIDVYMVLVKCWMIDAESRPTFKELI 262 (279)
T ss_pred --------------------CCCCCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence 023567789999999999999999999987
No 365
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=4e-38 Score=305.02 Aligned_cols=243 Identities=26% Similarity=0.347 Sum_probs=189.9
Q ss_pred eeeeecCceEEEEEEECCCCc--EEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCceEEEEEee
Q 011763 136 EKIGQGTYSSVFRARDLDTGK--IVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSCSIYLVFEY 212 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~--~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~lv~e~ 212 (478)
+.||+|+||.||++++..++. .+++|.+... ........+.+|+.++.++ +||||+++++++.. ...+|+||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--~~~~~lv~e~ 77 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH--RGYLYLAIEY 77 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc-CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEec--CCCceEEEEe
Confidence 358999999999999887775 4688887632 2344556788899999999 89999999999877 5678999999
Q ss_pred ccCCchhhccCC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecc
Q 011763 213 MEHDITGLLSCP----------------DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFG 276 (478)
Q Consensus 213 ~~~~ll~~~~~~----------------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG 276 (478)
++++.+..+... ...+++..+..++.||+.||+|||++|++|+||||+|||++.++.+||+|||
T Consensus 78 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 78 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCC
Confidence 987555443321 1247899999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCch
Q 011763 277 LANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDD 355 (478)
Q Consensus 277 ~a~~~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~ 355 (478)
++....... .......+..|+|||++.. ..++.++|||||||++|+|++ |..||.+.+..+....+.... ..
T Consensus 158 l~~~~~~~~--~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~--~~-- 230 (270)
T cd05047 158 LSRGQEVYV--KKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY--RL-- 230 (270)
T ss_pred Cccccchhh--hccCCCCccccCChHHHcc-CCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCC--CC--
Confidence 985332111 0111223567999998865 678999999999999999997 999998776655554432110 00
Q ss_pred hhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 356 YWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
+....++.++.+||.+||..||.+|||+.++|.
T Consensus 231 ------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 231 ------------------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred ------------------------CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 001246778999999999999999999999985
No 366
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=1.1e-38 Score=303.11 Aligned_cols=229 Identities=23% Similarity=0.315 Sum_probs=183.5
Q ss_pred cCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeeccCCchhh
Q 011763 141 GTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHDITGL 220 (478)
Q Consensus 141 G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~~~ll~~ 220 (478)
|.|+.||++++..+++.||+|++.... ...+|...+....||||+++++++.. ....|+||||++++.+..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~ 74 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVS--EDSVFLVLQHAEGGKLWS 74 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheec--CCeEEEEEecCCCCCHHH
Confidence 899999999999999999999997542 12235555556679999999999877 678999999999866655
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccccCCcccC
Q 011763 221 LSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRP 300 (478)
Q Consensus 221 ~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~t~~y~A 300 (478)
+......+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||.+...... .....++..|+|
T Consensus 75 ~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~y~a 150 (237)
T cd05576 75 HISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVENMYCA 150 (237)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCccccC
Confidence 5444456999999999999999999999999999999999999999999999999987654432 122345678999
Q ss_pred cccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchh
Q 011763 301 PELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRE 380 (478)
Q Consensus 301 PE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 380 (478)
||.+.+ ..++.++|||||||++|+|++|+.||........ . .. . ..
T Consensus 151 PE~~~~-~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~-----~---------~~------------------~-~~ 196 (237)
T cd05576 151 PEVGGI-SEETEACDWWSLGAILFELLTGKTLVECHPSGIN-----T---------HT------------------T-LN 196 (237)
T ss_pred CcccCC-CCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc-----c---------cc------------------c-cC
Confidence 998865 5678999999999999999999988753221000 0 00 0 00
Q ss_pred cccCCchhHHHHHHHhcCCCCCCccCH-----HHHHhCccc
Q 011763 381 TFKDLPTTAVNLIETLLSVEPYKRATA-----SAALASEYF 416 (478)
Q Consensus 381 ~~~~~~~~l~~Li~~mL~~dP~~R~ta-----~e~L~hp~f 416 (478)
....+++.+.+||.+||+.||++|+++ .++++||||
T Consensus 197 ~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 197 IPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred CcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 112467889999999999999999996 999999998
No 367
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=6.8e-38 Score=303.00 Aligned_cols=250 Identities=18% Similarity=0.256 Sum_probs=189.0
Q ss_pred eeeeecCceEEEEEEECC--CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeec
Q 011763 136 EKIGQGTYSSVFRARDLD--TGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYM 213 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~--~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~ 213 (478)
+.||+|+||.||+|.... ....+|+|.+.... .......+.+|+.+++.++|+||+++++.+.. ....|+||||+
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~--~~~~~lv~e~~ 77 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA-TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIE--SIPYLLVLEFC 77 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC-ChHHHHHHHHHHHHHHhCCCCCcceEEEEECC--CCceEEEEEeC
Confidence 368999999999996432 44578888876433 34445667789999999999999999998876 56799999999
Q ss_pred cCCchhhccCCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC-C
Q 011763 214 EHDITGLLSCPD-----IKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-Q 287 (478)
Q Consensus 214 ~~~ll~~~~~~~-----~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~-~ 287 (478)
+++.+..+.... ..+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||++........ .
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 78 PLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred CCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 986665543221 2346788899999999999999999999999999999999999999999999865332211 1
Q ss_pred CccccccCCcccCcccccC------CCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccC
Q 011763 288 PLTSRVVTLWYRPPELLLG------ATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKS 360 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~------~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 360 (478)
......+++.|+|||++.. ...++.++|||||||++|||++ |..||....+.+.+..+..........
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~----- 232 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPK----- 232 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCC-----
Confidence 1122344677999998742 2356889999999999999999 789998877766665554322111000
Q ss_pred CCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 361 KLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 361 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
......++..+.+++..|+ .||++|||++++++
T Consensus 233 ------------------~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 233 ------------------PQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred ------------------CcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 0011356788899999988 59999999999985
No 368
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=9.8e-38 Score=300.44 Aligned_cols=247 Identities=21% Similarity=0.293 Sum_probs=189.3
Q ss_pred eeeeecCceEEEEEEECC---CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEee
Q 011763 136 EKIGQGTYSSVFRARDLD---TGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEY 212 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~---~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~ 212 (478)
+.||+|+||.||+|.+.. ....||+|.+.... .....+.+.+|+.+++.++||||+++++++... +...++||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT-DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS-EGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC-CHHHHHHHHHHHHHHccCCCCCcceEEEEeecC-CCCcEEEEec
Confidence 468999999999998643 34679999875322 344556778899999999999999999977543 4457899999
Q ss_pred ccCCchhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC---CC
Q 011763 213 MEHDITGLLS-CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR---QP 288 (478)
Q Consensus 213 ~~~~ll~~~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~---~~ 288 (478)
+.++.+..+. .....+++..+..++.||+.||.|||+.+|+||||||+|||+++++.+||+|||+++....... ..
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 158 (262)
T cd05058 79 MKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHN 158 (262)
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecc
Confidence 9876555443 3344567888899999999999999999999999999999999999999999999875432111 11
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATL 367 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 367 (478)
.....++..|+|||++.+ ..++.++|||||||++|||++ |.+||...+..+....+... .++.
T Consensus 159 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~--~~~~------------- 222 (262)
T cd05058 159 HTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQG--RRLL------------- 222 (262)
T ss_pred cccCcCCccccChhHhcc-CccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC--CCCC-------------
Confidence 112334678999998876 678999999999999999999 56778776655544433211 0000
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
....++..+.++|.+||..||++||++.++|..
T Consensus 223 -------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 223 -------------QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred -------------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 002457789999999999999999999999853
No 369
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=9.1e-38 Score=307.91 Aligned_cols=253 Identities=20% Similarity=0.322 Sum_probs=197.9
Q ss_pred cccceeeeeeeeecCceEEEEEEECCCCc----EEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC
Q 011763 128 RADAFEKLEKIGQGTYSSVFRARDLDTGK----IVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS 203 (478)
Q Consensus 128 ~~~~y~~~~~LG~G~~g~V~~~~~~~~~~----~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 203 (478)
..++|++.+.||+|+||.||++.+..++. .||+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~--- 80 (303)
T cd05110 5 KETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPHLVRLLGVCLS--- 80 (303)
T ss_pred chhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC---
Confidence 35689999999999999999999877765 47888886543 23334467789999999999999999998865
Q ss_pred ceEEEEEeeccCC-chhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccC
Q 011763 204 CSIYLVFEYMEHD-ITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSN 282 (478)
Q Consensus 204 ~~~~lv~e~~~~~-ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~ 282 (478)
...++++||++++ +...+......+++..+..++.||+.||.|||+++|+|+||||+|||++.++.+||+|||+++...
T Consensus 81 ~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~ 160 (303)
T cd05110 81 PTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLE 160 (303)
T ss_pred CCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEcccccccccc
Confidence 2367999999975 444444444568999999999999999999999999999999999999999999999999997654
Q ss_pred CCCCC-CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccC
Q 011763 283 TGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKS 360 (478)
Q Consensus 283 ~~~~~-~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 360 (478)
..... ......++..|+|||++.+ ..++.++|||||||++|||++ |..||.+....+.. .+......++
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~-~~~~~~~~~~------- 231 (303)
T cd05110 161 GDEKEYNADGGKMPIKWMALECIHY-RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIP-DLLEKGERLP------- 231 (303)
T ss_pred CcccccccCCCccccccCCHHHhcc-CCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-HHHHCCCCCC-------
Confidence 32211 1122344678999999876 678999999999999999997 89999876544332 2222111110
Q ss_pred CCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 361 KLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 361 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
.....+..+.++|.+|+..||++||++.++++.
T Consensus 232 --------------------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 232 --------------------QPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred --------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 012356789999999999999999999998864
No 370
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=7.7e-38 Score=300.02 Aligned_cols=242 Identities=25% Similarity=0.404 Sum_probs=194.8
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|++.+.||+|+||.||++. .+++.||+|+++.+. ....+.+|+.+++.++||||+++++++.. ...|+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---~~~~~ 75 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILH---NGLYI 75 (254)
T ss_pred HHHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcC---CCcEE
Confidence 4679999999999999999986 467889999986432 23567789999999999999999998865 23789
Q ss_pred EEeeccCCchh-hccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 209 VFEYMEHDITG-LLSCP-DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 209 v~e~~~~~ll~-~~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
||||+.++.+. .+... ...+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||++.......
T Consensus 76 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~- 154 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV- 154 (254)
T ss_pred EEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccC-
Confidence 99999875444 43322 2358899999999999999999999999999999999999999999999999987543221
Q ss_pred CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCc
Q 011763 287 QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA 365 (478)
Q Consensus 287 ~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 365 (478)
.....+..|+|||++.+ ..++.++|||||||++|+|++ |++||...+..+....+......
T Consensus 155 ---~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~-------------- 216 (254)
T cd05083 155 ---DNSKLPVKWTAPEALKH-KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRM-------------- 216 (254)
T ss_pred ---CCCCCCceecCHHHhcc-CCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCC--------------
Confidence 12233567999998875 678899999999999999997 99999887766554444221000
Q ss_pred cccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 366 TLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 366 ~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
.....++..+.+||.+||+.+|.+||++.+++.
T Consensus 217 --------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 217 --------------EPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred --------------CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 001356788999999999999999999999985
No 371
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=7.8e-38 Score=302.32 Aligned_cols=245 Identities=22% Similarity=0.315 Sum_probs=193.0
Q ss_pred eeeeecCceEEEEEEECCCC------cEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 136 EKIGQGTYSSVFRARDLDTG------KIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~------~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
+.||.|+||.||++++.... +.||+|.+.... .......+.+|+.+++.++||||+++++++.. ....++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~v 77 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA-TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL--NEPQYII 77 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc-chhhHHHHHHHHHHHHhcCCCCeeeEeeeecC--CCCeEEE
Confidence 46899999999999876543 689999886432 23445677889999999999999999999876 5678999
Q ss_pred EeeccCCchhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCC-----cEEEeeccc
Q 011763 210 FEYMEHDITGLLSC-------PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG-----VLKLADFGL 277 (478)
Q Consensus 210 ~e~~~~~ll~~~~~-------~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~-----~vkl~DFG~ 277 (478)
|||++++.+..+.. ....+++..+..++.||+.||.|||+++++|+||||+||+++.++ .++|+|||+
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 78 MELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred EeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 99998755543322 223478899999999999999999999999999999999999887 899999999
Q ss_pred ccccCCCCC-CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCch
Q 011763 278 ANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDD 355 (478)
Q Consensus 278 a~~~~~~~~-~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~ 355 (478)
+........ ........+..|+|||++.+ ..++.++|||||||++|+|++ |+.||...+..+....+.... .+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~~--- 232 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLD-GKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGG-RL--- 232 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHcc-CCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCC-cc---
Confidence 875432211 11122344678999999876 668999999999999999998 999998877666554442210 00
Q ss_pred hhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 356 YWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
.....++..+.+||.+||..+|.+||++.++++
T Consensus 233 ------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 233 ------------------------QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred ------------------------CCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 011356788999999999999999999999874
No 372
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-38 Score=337.57 Aligned_cols=254 Identities=22% Similarity=0.361 Sum_probs=210.9
Q ss_pred ccccceeeeeeeeecCceEEEEEEECCCC-----cEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeec
Q 011763 127 LRADAFEKLEKIGQGTYSSVFRARDLDTG-----KIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSR 201 (478)
Q Consensus 127 ~~~~~y~~~~~LG~G~~g~V~~~~~~~~~-----~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 201 (478)
+....-++.+.||+|+||.||.|.-.... ..||||.++... +.+....|.+|..+|+.++|||||+++|++.+
T Consensus 689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~-~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~- 766 (1025)
T KOG1095|consen 689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS-SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD- 766 (1025)
T ss_pred CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCcceeeEEEeecC-
Confidence 44667889999999999999999865332 348999987654 56677888999999999999999999999988
Q ss_pred CCceEEEEEeeccCC-chhhccCC------CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEee
Q 011763 202 LSCSIYLVFEYMEHD-ITGLLSCP------DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLAD 274 (478)
Q Consensus 202 ~~~~~~lv~e~~~~~-ll~~~~~~------~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~D 274 (478)
....+|++|||+++ |+..+... ...++..++..++.||++|+.||+++++|||||...|+||+....+||+|
T Consensus 767 -~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaD 845 (1025)
T KOG1095|consen 767 -SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIAD 845 (1025)
T ss_pred -CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcc
Confidence 66789999999975 55555554 45689999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCcccc-ccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCC
Q 011763 275 FGLANFSNTGHRQPLTSR-VVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSP 352 (478)
Q Consensus 275 FG~a~~~~~~~~~~~~~~-~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~ 352 (478)
||+|+............. .....|||||.+.. ..++.++|||||||+|||+++ |..||...++.+.+....+.- ..
T Consensus 846 FGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d-~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-RL 923 (1025)
T KOG1095|consen 846 FGLARDIYDKDYYRKHGEAMLPVKWMPPESLKD-GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-RL 923 (1025)
T ss_pred cchhHhhhhchheeccCccccceecCCHHHHhh-cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC-cc
Confidence 999985433222211222 33568999999986 789999999999999999999 999999999998887665432 11
Q ss_pred CchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 353 PDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
+. ...+|+.+.+||..|++.+|+.||+...+++
T Consensus 924 ~~---------------------------P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 924 DP---------------------------PSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred CC---------------------------CCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 11 1368899999999999999999999999986
No 373
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.2e-37 Score=303.20 Aligned_cols=258 Identities=23% Similarity=0.346 Sum_probs=198.7
Q ss_pred ccceeeeeeeeecCceEEEEEEEC----CCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCc
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDL----DTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSC 204 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~----~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 204 (478)
.+.|++.+.||+|+||.||++... .++..||+|++...... .....+.+|+.+++.+.|+||+++++++......
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~ 81 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR 81 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence 347899999999999999999854 34789999999765433 3567788999999999999999999988775566
Q ss_pred eEEEEEeeccCCchhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCC
Q 011763 205 SIYLVFEYMEHDITGLLS-CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNT 283 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~ 283 (478)
..++||||++++.+..+. .....+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.....
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPE 161 (284)
T ss_pred ceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence 799999999875554443 3344689999999999999999999999999999999999999999999999999976653
Q ss_pred CCCCC--ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHH-----------HHHHHHHcC
Q 011763 284 GHRQP--LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQ-----------LHKIFKLCG 350 (478)
Q Consensus 284 ~~~~~--~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~-----------~~~i~~~~g 350 (478)
..... ......+..|+|||.+.+ ..++.++|||||||++|+|++|..||........ ...+...+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd05038 162 DKDYYYVKEPGESPIFWYAPECLRT-SKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK 240 (284)
T ss_pred CCcceeccCCCCCcccccCcHHHcc-CCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHH
Confidence 22111 112233567999998876 5788999999999999999999998865432110 111111100
Q ss_pred CCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 351 SPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
... .. .....++.++.+|+.+||..||.+|||+.++++
T Consensus 241 ~~~-------------------~~-----~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 241 EGE-------------------RL-----PRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred cCC-------------------cC-----CCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 000 00 001245688999999999999999999999985
No 374
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.4e-37 Score=301.10 Aligned_cols=253 Identities=22% Similarity=0.298 Sum_probs=197.6
Q ss_pred eeeeeeeeecCceEEEEEEEC---CCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC----c
Q 011763 132 FEKLEKIGQGTYSSVFRARDL---DTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS----C 204 (478)
Q Consensus 132 y~~~~~LG~G~~g~V~~~~~~---~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~----~ 204 (478)
|.+.+.||+|+||.||+|.+. .+++.||||++..+.......+.+.+|+.+|+.++||||+++++++..... .
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 677889999999999999854 357899999998766556667778899999999999999999998764321 1
Q ss_pred eEEEEEeeccCCchhhcc------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccc
Q 011763 205 SIYLVFEYMEHDITGLLS------CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLA 278 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~------~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a 278 (478)
..++++||+.++.+..+. .....+++..++.++.||+.||+|||+++|+|+||||+||+++.++.+||+|||++
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence 347889999876554321 11235789999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCC-CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchh
Q 011763 279 NFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDY 356 (478)
Q Consensus 279 ~~~~~~~~~-~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~ 356 (478)
+........ ......+++.|++||.+.. ..++.++|||||||++|+|++ |++||...+..+....+... ..+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~--- 235 (273)
T cd05074 161 KKIYSGDYYRQGCASKLPVKWLALESLAD-NVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG-NRLK--- 235 (273)
T ss_pred ccccCCcceecCCCccCchhhcCHhHHhc-CccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcC-CcCC---
Confidence 765432111 1122234678999998876 667899999999999999999 89999887765544443321 0000
Q ss_pred hccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 357 WKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
.....+..+.+|+.+||..+|++||++.+++.+
T Consensus 236 ------------------------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 236 ------------------------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred ------------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 002467889999999999999999999999853
No 375
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.5e-37 Score=299.16 Aligned_cols=250 Identities=20% Similarity=0.250 Sum_probs=187.1
Q ss_pred eeeeecCceEEEEEEEC--CCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeec
Q 011763 136 EKIGQGTYSSVFRARDL--DTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYM 213 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~--~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~ 213 (478)
+.||+|+||.||+|... .++..+|+|.++.... ......+.+|+.+++.++||||+++++++.+ ....++||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~ 77 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTE--VTPYLLVMEFC 77 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC--CCCcEEEEECC
Confidence 36899999999999754 3456799999875542 3334567789999999999999999998876 56689999999
Q ss_pred cCCchhhccC-----CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC-C
Q 011763 214 EHDITGLLSC-----PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-Q 287 (478)
Q Consensus 214 ~~~ll~~~~~-----~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~-~ 287 (478)
+++.+..+.. ....+++..+..++.||+.||.|||+++++|+||||+||+++.++.+||+|||++........ .
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 78 PLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred CCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 9765554432 123456778889999999999999999999999999999999999999999999865432211 1
Q ss_pred CccccccCCcccCcccccCC------CCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccC
Q 011763 288 PLTSRVVTLWYRPPELLLGA------TDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKS 360 (478)
Q Consensus 288 ~~~~~~~t~~y~APE~l~~~------~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 360 (478)
......++..|+|||++.+. ..++.++|||||||++|||++ |+.||......+...........
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~--------- 228 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQL--------- 228 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccC---------
Confidence 11233457889999988542 135789999999999999996 99999876655543332211000
Q ss_pred CCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 361 KLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 361 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
+.+ .+ ......++.+.++|..|+ .||++|||+.+++.
T Consensus 229 ~~~--------~~------~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 229 KLP--------KP------RLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred CCC--------CC------ccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 000 00 001235677899999998 68999999999974
No 376
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.2e-37 Score=298.89 Aligned_cols=236 Identities=22% Similarity=0.260 Sum_probs=186.0
Q ss_pred eeeeecCceEEEEEEECCCC----------cEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCce
Q 011763 136 EKIGQGTYSSVFRARDLDTG----------KIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCS 205 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~----------~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 205 (478)
+.||+|+||.||++.+..++ ..|++|++.... .....+.+|+.+|+.++||||+++++++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH---RDSLAFFETASLMSQLSHKHLVKLYGVCVR---DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch---hhHHHHHHHHHHHHcCCCcchhheeeEEec---CC
Confidence 46899999999999987766 357888776433 115667889999999999999999998866 34
Q ss_pred EEEEEeeccCCchhhccCCCC-CCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCC-------cEEEeeccc
Q 011763 206 IYLVFEYMEHDITGLLSCPDI-KFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG-------VLKLADFGL 277 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~-------~vkl~DFG~ 277 (478)
.++||||+.++.+..+..... .+++..+..++.||+.||.|||++||+|+||||+|||++.++ .+||+|||+
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 689999999877766654433 789999999999999999999999999999999999999888 799999999
Q ss_pred ccccCCCCCCCccccccCCcccCcccccCC-CCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCch
Q 011763 278 ANFSNTGHRQPLTSRVVTLWYRPPELLLGA-TDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDD 355 (478)
Q Consensus 278 a~~~~~~~~~~~~~~~~t~~y~APE~l~~~-~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~ 355 (478)
+...... ....++..|+|||++.+. ..++.++|||||||++|+|++ |..||...+..+....... ....
T Consensus 155 a~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~-~~~~--- 225 (259)
T cd05037 155 PITVLSR-----EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQD-QHRL--- 225 (259)
T ss_pred ccccccc-----cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhc-CCCC---
Confidence 8765431 223456779999998763 368999999999999999999 5788876653332222110 0000
Q ss_pred hhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 356 YWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
.......+.+||.+||..||.+|||+.++|+
T Consensus 226 --------------------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 226 --------------------------PMPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred --------------------------CCCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0011267899999999999999999999985
No 377
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-39 Score=308.89 Aligned_cols=266 Identities=24% Similarity=0.401 Sum_probs=213.8
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCC-C----ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDN-F----EPESVRFMAREILILRRLDHPNIIKLEGLITSRLS 203 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~-~----~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 203 (478)
.++|-+++.||+|+|+.||++.|....++||+|+-..+. + .....+...+|..|.+.|+||.||++|++|.-. .
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD-t 540 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD-T 540 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec-c
Confidence 568999999999999999999999999999999865432 1 123345567899999999999999999999754 5
Q ss_pred ceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC--CceeccCCCCcEEEecC---CcEEEeecccc
Q 011763 204 CSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSR--GVLHRDIKGSNLLVNNE---GVLKLADFGLA 278 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~--givHrDlkp~NILl~~~---~~vkl~DFG~a 278 (478)
+.+|.|+|||+|+.+++++.....+++.+++.|+.||+.||.||.+. .|||-||||.||||... |.+||+|||++
T Consensus 541 dsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLS 620 (775)
T KOG1151|consen 541 DSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLS 620 (775)
T ss_pred ccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchh
Confidence 67899999999999999988888999999999999999999999987 59999999999999654 78999999999
Q ss_pred cccCCCCCC------CccccccCCcccCcccccC---CCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHc
Q 011763 279 NFSNTGHRQ------PLTSRVVTLWYRPPELLLG---ATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLC 349 (478)
Q Consensus 279 ~~~~~~~~~------~~~~~~~t~~y~APE~l~~---~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~ 349 (478)
+++...... ......||.||++||.+.- ....+.++||||+|||+|..+.|+.||..+.....+.+.-..+
T Consensus 621 KIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIl 700 (775)
T KOG1151|consen 621 KIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTIL 700 (775)
T ss_pred hhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchh
Confidence 987643322 1233567999999999753 2457889999999999999999999998654333222111110
Q ss_pred CCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 350 GSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 350 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
.. ..+..|.. +-++.++++||++||++--+.|+...++-.||||.-
T Consensus 701 kA-------------tEVqFP~K----------PvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 701 KA-------------TEVQFPPK----------PVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred cc-------------eeccCCCC----------CccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence 00 00001111 357899999999999999999999999999999965
No 378
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=4.9e-37 Score=301.45 Aligned_cols=261 Identities=18% Similarity=0.157 Sum_probs=187.5
Q ss_pred ccceeeeeeeeecCceEEEEEEECCC---CcEEEEEEeecCCCChHHH---------HHHHHHHHHHHhcCCCCeeeecc
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDT---GKIVALKKVRFDNFEPESV---------RFMAREILILRRLDHPNIIKLEG 196 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~---~~~vAlK~~~~~~~~~~~~---------~~~~~E~~~l~~l~h~nIv~l~~ 196 (478)
.++|++.+.||+|+||+||+|.+..+ +..+|+|+........... .....+...+..+.|+||+++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 45899999999999999999998777 6778888754433211100 01122334455678999999988
Q ss_pred eeeecCC--ceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEee
Q 011763 197 LITSRLS--CSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLAD 274 (478)
Q Consensus 197 ~~~~~~~--~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~D 274 (478)
....... ...++++|++...+...+.. ...+++..++.++.||+.||.|||+++|+||||||+|||++.++.++|+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~D 169 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVENTKEIFKR-IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIID 169 (294)
T ss_pred eeeEecCCceEEEEEEehhccCHHHHHHh-hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEE
Confidence 6544222 24478888876655444332 23467888999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCC------CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 011763 275 FGLANFSNTGHR------QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKL 348 (478)
Q Consensus 275 FG~a~~~~~~~~------~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~ 348 (478)
||+|+....... .......+|+.|+|||++.+ ..++.++|||||||+||||++|.+||.+......+......
T Consensus 170 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~-~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~ 248 (294)
T PHA02882 170 YGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNG-ACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKC 248 (294)
T ss_pred cCCceeeccCCcccccccccccccCCCccccCHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHH
Confidence 999976532111 11223468999999998876 67899999999999999999999999887432222111110
Q ss_pred cCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 349 CGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 349 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
+++..... -....+..+..+.+++..|+..+|++||++.++++
T Consensus 249 ------~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 249 ------DFIKRLHE---------------GKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred ------HHHHHhhh---------------hhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 00000000 00012356788999999999999999999999874
No 379
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-38 Score=323.77 Aligned_cols=203 Identities=31% Similarity=0.480 Sum_probs=174.7
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecC----CceE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRL----SCSI 206 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----~~~~ 206 (478)
.+...+.||+|+||.||+++++.+|+.||||.++... .....+...+|+++|++|+|+|||+++++-.... ....
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 3566788999999999999999999999999998654 3455677788999999999999999998876554 4556
Q ss_pred EEEEeeccCCchhhccCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecC--C--cEEEeeccccc
Q 011763 207 YLVFEYMEHDITGLLSCP---DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE--G--VLKLADFGLAN 279 (478)
Q Consensus 207 ~lv~e~~~~~ll~~~~~~---~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~--~--~vkl~DFG~a~ 279 (478)
.+|||||.++.+....+. ...|++.++..++..+..||.|||++|||||||||.||++-.. | ..||+|||.|+
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar 172 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR 172 (732)
T ss_pred eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence 899999998766655442 2459999999999999999999999999999999999998543 3 36999999999
Q ss_pred ccCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Q 011763 280 FSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGR 336 (478)
Q Consensus 280 ~~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~ 336 (478)
...++ ....+.+||+.|++||++.....|+..+|.|||||++|+.+||..||...
T Consensus 173 el~d~--s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 173 ELDDN--SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred cCCCC--CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 87764 47788999999999999885588999999999999999999999999654
No 380
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.1e-36 Score=294.82 Aligned_cols=250 Identities=20% Similarity=0.274 Sum_probs=186.8
Q ss_pred eeeeecCceEEEEEEECCC--CcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeec
Q 011763 136 EKIGQGTYSSVFRARDLDT--GKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYM 213 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~--~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~ 213 (478)
+.||+|+||+||++..... ...+++|.+.... .....+.+.+|+.+++.++||||+++++.+.. ....|+||||+
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~--~~~~~lv~e~~ 77 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANA-SSKEQNEFLQQGDPYRILQHPNILQCLGQCVE--AIPYLLVFEYC 77 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCC-ChHHHHHHHHHHHHHhccCCcchhheEEEecC--CCccEEEEecC
Confidence 3689999999999975432 3356677766443 23445678889999999999999999999877 56789999999
Q ss_pred cCCchhhccCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC-CCC
Q 011763 214 EHDITGLLSCP----DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH-RQP 288 (478)
Q Consensus 214 ~~~ll~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~-~~~ 288 (478)
+++.+..+... ...+++..++.++.||+.||.|||+++|+||||||+|||++.++.++|+|||++....... ...
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 78 ELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred CCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 97655443322 2346777888999999999999999999999999999999999999999999985432111 111
Q ss_pred ccccccCCcccCcccccC------CCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCC
Q 011763 289 LTSRVVTLWYRPPELLLG------ATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK 361 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~------~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 361 (478)
.....++..|+|||++.. ...++.++|||||||++|||++ |.+||...++.+.+..+....... .
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~---~----- 229 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVK---L----- 229 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccc---c-----
Confidence 233456888999998753 1235778999999999999997 578898777766666554321100 0
Q ss_pred CCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 362 LPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 362 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
+.+ . ....+++.+.++|..|+ .+|++||++.++++
T Consensus 230 ------~~~------~---~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 230 ------FKP------Q---LELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred ------CCC------c---cCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 000 0 01246778899999999 68999999999974
No 381
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-39 Score=293.02 Aligned_cols=262 Identities=23% Similarity=0.367 Sum_probs=207.7
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCceEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~ 207 (478)
.++.+-+..||.|+||+|++..++.+|+..|||.++..+.. ....+++.|.....+- ++||||++++.+.. ++..|
T Consensus 63 ~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~-keq~rll~e~d~~mks~~cp~IVkfyGa~F~--EGdcW 139 (361)
T KOG1006|consen 63 SDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIE-KEQKRLLMEHDTVMKSSNCPNIVKFYGALFS--EGDCW 139 (361)
T ss_pred cchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccch-HHHHHHHHHHHHHHhhcCCcHHHHHhhhhhc--CCcee
Confidence 45677788999999999999999999999999999977653 4445666787765554 89999999998876 45589
Q ss_pred EEEeeccCCchhhcc----CCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCcEEEecCCcEEEeecccccccC
Q 011763 208 LVFEYMEHDITGLLS----CPDIKFSEAQIKCYMNQLLHGLEHCHSR-GVLHRDIKGSNLLVNNEGVLKLADFGLANFSN 282 (478)
Q Consensus 208 lv~e~~~~~ll~~~~----~~~~~l~~~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~~~~vkl~DFG~a~~~~ 282 (478)
|.||+|.-++-.++. ..+..++|..+-.|....+.||+||... .|||||+||+||||+..|.+||||||.+-...
T Consensus 140 iCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv 219 (361)
T KOG1006|consen 140 ICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV 219 (361)
T ss_pred eeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHH
Confidence 999999875543332 2445689999999999999999999965 89999999999999999999999999986543
Q ss_pred CCCCCCccccccCCcccCcccccCCC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHcCCCCchhhccC
Q 011763 283 TGHRQPLTSRVVTLWYRPPELLLGAT-DYGPSVDLWSVGCVFAELLIGKPILQGRTE-VEQLHKIFKLCGSPPDDYWKKS 360 (478)
Q Consensus 283 ~~~~~~~~~~~~t~~y~APE~l~~~~-~~~~~~DiwslG~il~elltG~~pf~~~~~-~~~~~~i~~~~g~~~~~~~~~~ 360 (478)
.. -..+...|...|||||.+.... .|+.++||||||++|||+.||+.|+.+-+. .+++.+++. |.||.-..
T Consensus 220 ~S--iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~--gdpp~l~~--- 292 (361)
T KOG1006|consen 220 DS--IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVI--GDPPILLF--- 292 (361)
T ss_pred HH--HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHc--CCCCeecC---
Confidence 22 2224456788899999997544 499999999999999999999999987443 345544432 33331100
Q ss_pred CCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 361 KLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 361 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
....-+++..+..+|..||.+|-..||...+++++||+..
T Consensus 293 ------------------~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~ 332 (361)
T KOG1006|consen 293 ------------------DKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRM 332 (361)
T ss_pred ------------------cccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhh
Confidence 0111257889999999999999999999999999999974
No 382
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-37 Score=320.14 Aligned_cols=263 Identities=27% Similarity=0.437 Sum_probs=218.1
Q ss_pred cccccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeee---c
Q 011763 126 PLRADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITS---R 201 (478)
Q Consensus 126 ~~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~---~ 201 (478)
+...+.|++...||.|.+|.||++++..+++.+|+|++..+. +..+.+..|.+||+.+ +|||++.++++|.. .
T Consensus 15 pdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~---d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~ 91 (953)
T KOG0587|consen 15 PDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE---DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPG 91 (953)
T ss_pred CCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc---cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCC
Confidence 445788999999999999999999999999999999997654 3335566799999988 79999999998853 3
Q ss_pred CCceEEEEEeeccCCchhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeeccccc
Q 011763 202 LSCSIYLVFEYMEHDITGLLSC--PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLAN 279 (478)
Q Consensus 202 ~~~~~~lv~e~~~~~ll~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~ 279 (478)
.++.+|||||||.++...++.. .+..+.|+.+..|++.++.||.+||.+.++|||||-.|||++.++.|||+|||.+.
T Consensus 92 ~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSa 171 (953)
T KOG0587|consen 92 NGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSA 171 (953)
T ss_pred CCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeee
Confidence 3568999999999877655543 25578999999999999999999999999999999999999999999999999997
Q ss_pred ccCCCCCCCccccccCCcccCcccccCC----CCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCch
Q 011763 280 FSNTGHRQPLTSRVVTLWYRPPELLLGA----TDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDD 355 (478)
Q Consensus 280 ~~~~~~~~~~~~~~~t~~y~APE~l~~~----~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~ 355 (478)
..... .....+.+|||.|||||++... ..|+..+|+||||++..||.-|.||+-.......+..|- -.||+.
T Consensus 172 QldsT-~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~Ip---RNPPPk 247 (953)
T KOG0587|consen 172 QLDST-VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP---RNPPPK 247 (953)
T ss_pred eeecc-cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCC---CCCCcc
Confidence 66532 2344667899999999998642 347789999999999999999999998777665554442 222221
Q ss_pred hhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 356 YWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
. ..+...+.++.+||..||.+|-.+||+..++|+|||+++
T Consensus 248 L-----------------------krp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e 287 (953)
T KOG0587|consen 248 L-----------------------KRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE 287 (953)
T ss_pred c-----------------------cchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence 1 112456788999999999999999999999999999985
No 383
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-36 Score=299.86 Aligned_cols=258 Identities=22% Similarity=0.283 Sum_probs=208.5
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.+...+.++||+|-||.|.+|+. ..+..||+|+++.+. .......|.+||++|.+|+|||||.|+++|.. .+.+||
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a-~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~--DePicm 612 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDA-TKNARNDFLKEIKILSRLKHPNIVELLGVCVQ--DDPLCM 612 (807)
T ss_pred hhheehhhhhcCcccceeEEEEe-cCceEEEEeecCccc-chhHHHHHHHHHHHHhccCCCCeeEEEeeeec--CCchHH
Confidence 56788999999999999999985 447899999998664 44556788999999999999999999999987 677999
Q ss_pred EEeeccCCchhhccCCC-CC-CCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 209 VFEYMEHDITGLLSCPD-IK-FSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~-~~-l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
|+|||+++.+..+.... .+ +.......|+.||+.||+||.+.++|||||.+.|+|++.++++||+|||+++....+..
T Consensus 613 I~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y 692 (807)
T KOG1094|consen 613 ITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY 692 (807)
T ss_pred HHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCc
Confidence 99999986655544333 22 34455667999999999999999999999999999999999999999999986554433
Q ss_pred CCcc-ccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCC
Q 011763 287 QPLT-SRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI--GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP 363 (478)
Q Consensus 287 ~~~~-~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt--G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 363 (478)
.... ..+.+..|||||.+.. ++++.++|+|+||++|||+++ ...||...++.+..++.-..+...+....
T Consensus 693 y~vqgr~vlpiRwmawEsill-gkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~------ 765 (807)
T KOG1094|consen 693 YRVQGRAVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVV------ 765 (807)
T ss_pred eeeecceeeeeeehhHHHHHh-ccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCccee------
Confidence 3333 3345889999999986 679999999999999999865 77999988888877776655433322110
Q ss_pred CccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 364 HATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 364 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
....+-++..+.+||.+|+..|-.+||+.+++..
T Consensus 766 ---------------l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 766 ---------------LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred ---------------ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 0111357889999999999999999999999853
No 384
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-37 Score=305.69 Aligned_cols=250 Identities=24% Similarity=0.370 Sum_probs=205.7
Q ss_pred ccceeeeeeeeecCceEEEEEEECC--C--CcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCc
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLD--T--GKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSC 204 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~--~--~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 204 (478)
.+.....++||.|-||.||.|.... . .--||||..+.+. +.+..+.|+.|..+|+.++|||||+|+|+|.+ .
T Consensus 388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~-t~d~tekflqEa~iMrnfdHphIikLIGv~~e---~ 463 (974)
T KOG4257|consen 388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC-TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE---Q 463 (974)
T ss_pred hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC-ChhhHHHHHHHHHHHHhCCCcchhheeeeeec---c
Confidence 3345566789999999999997532 2 3358999998765 55668889999999999999999999999986 4
Q ss_pred eEEEEEeeccCC-chhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCC
Q 011763 205 SIYLVFEYMEHD-ITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNT 283 (478)
Q Consensus 205 ~~~lv~e~~~~~-ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~ 283 (478)
.+|||||+++.+ |...+..+...|+...+..|+.||..||.|||+..+|||||-..|||+.....|||+|||+++....
T Consensus 464 P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed 543 (974)
T KOG4257|consen 464 PMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLED 543 (974)
T ss_pred ceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccc
Confidence 589999999965 4455556667899999999999999999999999999999999999999999999999999998876
Q ss_pred CCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCC
Q 011763 284 GHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL 362 (478)
Q Consensus 284 ~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 362 (478)
......+....+.-|||||.+.- ..++.++|||-|||.|||++. |..||.+-.+.+.+-.|-+.--.|
T Consensus 544 ~~yYkaS~~kLPIKWmaPESINf-RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP---------- 612 (974)
T KOG4257|consen 544 DAYYKASRGKLPIKWMAPESINF-RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLP---------- 612 (974)
T ss_pred cchhhccccccceeecCccccch-hcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCC----------
Confidence 55444444444778999999875 678999999999999999987 999999987777655443211100
Q ss_pred CCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHH
Q 011763 363 PHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAAL 411 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L 411 (478)
..+.+|+.+..|+.+|+.+||.+||+..++.
T Consensus 613 ------------------~P~nCPp~LYslmskcWayeP~kRPrftei~ 643 (974)
T KOG4257|consen 613 ------------------CPPNCPPALYSLMSKCWAYEPSKRPRFTEIK 643 (974)
T ss_pred ------------------CCCCCChHHHHHHHHHhccCcccCCcHHHHH
Confidence 1247899999999999999999999987653
No 385
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=8.4e-36 Score=308.47 Aligned_cols=276 Identities=24% Similarity=0.317 Sum_probs=187.9
Q ss_pred ccccceeeeeeeeecCceEEEEEEEC----------------CCCcEEEEEEeecCCCCh------------HHHHHHHH
Q 011763 127 LRADAFEKLEKIGQGTYSSVFRARDL----------------DTGKIVALKKVRFDNFEP------------ESVRFMAR 178 (478)
Q Consensus 127 ~~~~~y~~~~~LG~G~~g~V~~~~~~----------------~~~~~vAlK~~~~~~~~~------------~~~~~~~~ 178 (478)
...++|++.++||+|+||+||+|.+. ..++.||||.+....... ...+....
T Consensus 142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence 34789999999999999999999742 245679999986543110 00112234
Q ss_pred HHHHHHhcCCCCe-----eeecceeeec------CCceEEEEEeeccCCchhhccCC-----------------------
Q 011763 179 EILILRRLDHPNI-----IKLEGLITSR------LSCSIYLVFEYMEHDITGLLSCP----------------------- 224 (478)
Q Consensus 179 E~~~l~~l~h~nI-----v~l~~~~~~~------~~~~~~lv~e~~~~~ll~~~~~~----------------------- 224 (478)
|+.++.+++|.++ ++++++|... .....+|||||++++.+..+...
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 7778888876654 6677776532 12457999999998655443321
Q ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccccCCcccCccc
Q 011763 225 -DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPEL 303 (478)
Q Consensus 225 -~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~t~~y~APE~ 303 (478)
...+++..++.++.||+.+|.|||+++|+||||||+|||++.++.+||+|||++...............+|+.|+|||+
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~ 381 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEE 381 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhh
Confidence 1134667889999999999999999999999999999999999999999999997554332222222334789999998
Q ss_pred ccCCCC-------------------C--CChhhHHHHHHHHHHHHhCCC-CCCCCChHHHHHHHHHHcCCCCchhhccCC
Q 011763 304 LLGATD-------------------Y--GPSVDLWSVGCVFAELLIGKP-ILQGRTEVEQLHKIFKLCGSPPDDYWKKSK 361 (478)
Q Consensus 304 l~~~~~-------------------~--~~~~DiwslG~il~elltG~~-pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 361 (478)
+..... | ....||||+|||+|+|++|.. ||..........+. .. .....|...+
T Consensus 382 l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~---~~-~~~~~~r~~~ 457 (507)
T PLN03224 382 LVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQ---YD-NDLNRWRMYK 457 (507)
T ss_pred hcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhh---cc-chHHHHHhhc
Confidence 754211 1 124799999999999999874 77543221111000 00 0011121111
Q ss_pred CCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCC---CCccCHHHHHhCcccCC
Q 011763 362 LPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEP---YKRATASAALASEYFST 418 (478)
Q Consensus 362 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP---~~R~ta~e~L~hp~f~~ 418 (478)
.. .++ ...+..+++..+|||.+||..+| .+|+|+.|+|+||||..
T Consensus 458 ~~---------~~~---~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 458 GQ---------KYD---FSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred cc---------CCC---cccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 00 000 11245678999999999999876 68999999999999954
No 386
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=1.7e-35 Score=279.72 Aligned_cols=244 Identities=38% Similarity=0.591 Sum_probs=197.1
Q ss_pred CceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeeccCCchhhc
Q 011763 142 TYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHDITGLL 221 (478)
Q Consensus 142 ~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~~~ll~~~ 221 (478)
+||.||++.+..+++.+|+|++........ .+.+.+|+.++++++|+||+++++.+.. ....++++||++++.+..+
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~~~l~~e~~~~~~L~~~ 77 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFED--EDKLYLVMEYCDGGDLFDL 77 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheee--CCEEEEEEeCCCCCCHHHH
Confidence 589999999988899999999976543221 5678899999999999999999999877 5678999999998555555
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccccCCcccCc
Q 011763 222 SCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPP 301 (478)
Q Consensus 222 ~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~t~~y~AP 301 (478)
......+++..+..++.+++.+|.|||+.+++|+||+|.||+++.++.++|+|||.+....... ......++..|++|
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~p 155 (244)
T smart00220 78 LKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPEYMAP 155 (244)
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcCCCCH
Confidence 4444448999999999999999999999999999999999999999999999999997665432 23345668889999
Q ss_pred ccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhc
Q 011763 302 ELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRET 381 (478)
Q Consensus 302 E~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 381 (478)
|.+.+ ..++.++|||+||+++|+|++|..||......+.+.+.......... ..
T Consensus 156 E~~~~-~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~-------------------------~~ 209 (244)
T smart00220 156 EVLLG-KGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFP-------------------------PP 209 (244)
T ss_pred HHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCc-------------------------cc
Confidence 98875 56788999999999999999999999874443333333221110000 00
Q ss_pred ccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 382 FKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 382 ~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
...++.++.+++.+||..||++||++.++++||||
T Consensus 210 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 210 EWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred cccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 01277889999999999999999999999999997
No 387
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-37 Score=312.55 Aligned_cols=255 Identities=24% Similarity=0.381 Sum_probs=222.7
Q ss_pred ccccceeeeeeeeecCceEEEEEEECCCC---cEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC
Q 011763 127 LRADAFEKLEKIGQGTYSSVFRARDLDTG---KIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS 203 (478)
Q Consensus 127 ~~~~~y~~~~~LG~G~~g~V~~~~~~~~~---~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 203 (478)
+......|.+.||.|.||.|++|+.+..+ ..||||.++... ...+...|+.|+.||.+++||||++|.++.+. .
T Consensus 626 Id~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy-tekqrrdFL~EAsIMGQFdHPNIIrLEGVVTk--s 702 (996)
T KOG0196|consen 626 IDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIRLEGVVTK--S 702 (996)
T ss_pred cChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc-cHHHHhhhhhhhhhcccCCCCcEEEEEEEEec--C
Confidence 44567889999999999999999987655 469999998554 66777888999999999999999999999987 6
Q ss_pred ceEEEEEeeccCCchh-hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccC
Q 011763 204 CSIYLVFEYMEHDITG-LLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSN 282 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~-~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~ 282 (478)
..+.||.|||+++.|+ +++.+++.|+..++..+++.|+.|+.||-++++|||||...||||+.+...|++|||+++...
T Consensus 703 ~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvle 782 (996)
T KOG0196|consen 703 KPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 782 (996)
T ss_pred ceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecc
Confidence 7799999999986555 555677889999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCcccccc--CCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhcc
Q 011763 283 TGHRQPLTSRVV--TLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKK 359 (478)
Q Consensus 283 ~~~~~~~~~~~~--t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~ 359 (478)
++.....++.-| +..|.|||.|.- .+++.++||||+|++|||.++ |.-||...++.+.+..|.+...-||+
T Consensus 783 dd~~~~ytt~GGKIPiRWTAPEAIa~-RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpP----- 856 (996)
T KOG0196|consen 783 DDPEAAYTTLGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPP----- 856 (996)
T ss_pred cCCCccccccCCccceeecChhHhhh-cccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCC-----
Confidence 655444444433 678999999986 789999999999999999886 99999999999999999887766653
Q ss_pred CCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 360 SKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
.+.|..+.+|+..|+++|-.+||+..|++.+
T Consensus 857 -----------------------mDCP~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 857 -----------------------MDCPAALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred -----------------------CCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 2689999999999999999999999998743
No 388
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=1.2e-36 Score=293.23 Aligned_cols=281 Identities=32% Similarity=0.510 Sum_probs=214.1
Q ss_pred ccceeeeeeeeecCceEEEEEEECC---CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCc
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLD---TGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSC 204 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~---~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 204 (478)
.+.|..+++||+|.|++||++.+.. ....||+|.+.... ....+.+|+++|..+ .+.||+++.+.+.. ++
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts----~p~ri~~El~~L~~~gG~~ni~~~~~~~rn--nd 108 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS----SPSRILNELEMLYRLGGSDNIIKLNGCFRN--ND 108 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc----CchHHHHHHHHHHHhccchhhhcchhhhcc--CC
Confidence 5689999999999999999999877 78899999987543 335588999999999 69999999998876 78
Q ss_pred eEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecC-CcEEEeecccccccCC
Q 011763 205 SIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE-GVLKLADFGLANFSNT 283 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~-~~vkl~DFG~a~~~~~ 283 (478)
.+++||||+++.....+.. .++...++.|++.++.||.++|.+|||||||||.|+|.+.. +.-.|+|||+|.....
T Consensus 109 ~v~ivlp~~~H~~f~~l~~---~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~ 185 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYR---SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDG 185 (418)
T ss_pred eeEEEecccCccCHHHHHh---cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHh
Confidence 8999999999865555443 46788999999999999999999999999999999999865 7789999999962100
Q ss_pred C-------------------------------------------CCCCccccccCCcccCcccccCCCCCCChhhHHHHH
Q 011763 284 G-------------------------------------------HRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVG 320 (478)
Q Consensus 284 ~-------------------------------------------~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG 320 (478)
. .....-.+.||++|+|||+++....-++++||||.|
T Consensus 186 ~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~G 265 (418)
T KOG1167|consen 186 YQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAG 265 (418)
T ss_pred hhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecc
Confidence 0 000012356899999999999877778899999999
Q ss_pred HHHHHHHhCCCCC-CCCChHHHHHHHHHHcCCCC--------ch--hhccCCCCCc--------cc-cCCCCCCCc---c
Q 011763 321 CVFAELLIGKPIL-QGRTEVEQLHKIFKLCGSPP--------DD--YWKKSKLPHA--------TL-FKPQQPYDS---S 377 (478)
Q Consensus 321 ~il~elltG~~pf-~~~~~~~~~~~i~~~~g~~~--------~~--~~~~~~~~~~--------~~-~~~~~~~~~---~ 377 (478)
+|+..+++++.|| ...++.+.+..|...+|.-. .. .|.....+.. .. ......-+. .
T Consensus 266 VI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~ 345 (418)
T KOG1167|consen 266 VILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTE 345 (418)
T ss_pred ceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccccccee
Confidence 9999999999775 55666677777766655433 12 3443221100 00 000011111 1
Q ss_pred chhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 378 LRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 378 l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
.......++..+.+|+.+||+.||.+|+||+++|+||||..
T Consensus 346 ~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~ 386 (418)
T KOG1167|consen 346 REIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE 386 (418)
T ss_pred eccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence 22222445668999999999999999999999999999984
No 389
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-36 Score=300.40 Aligned_cols=254 Identities=22% Similarity=0.304 Sum_probs=209.6
Q ss_pred ccceeeeeeeeecCceEEEEEEECC-CC--cEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCce
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLD-TG--KIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCS 205 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~-~~--~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 205 (478)
.++..+.++||+|.||.||+|.+.. .| ..||||.++.+.... ....|.+|+.+|.+|+|+|+++||++..+ ..
T Consensus 109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~---qp 184 (1039)
T KOG0199|consen 109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD---QP 184 (1039)
T ss_pred HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc---ch
Confidence 3466778999999999999998754 33 368999998777654 56788999999999999999999999876 34
Q ss_pred EEEEEeeccC-CchhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCC
Q 011763 206 IYLVFEYMEH-DITGLLSC-PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNT 283 (478)
Q Consensus 206 ~~lv~e~~~~-~ll~~~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~ 283 (478)
+.||||+++. +|++.+.. ....|....+..|+.||+.||.||..+++|||||-..||||-....|||+|||+.+....
T Consensus 185 ~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 185 AMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGE 264 (1039)
T ss_pred hhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCC
Confidence 7899999996 55666655 455688999999999999999999999999999999999999999999999999987765
Q ss_pred CCCCC--ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccC
Q 011763 284 GHRQP--LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKS 360 (478)
Q Consensus 284 ~~~~~--~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 360 (478)
+.... .........|+|||.|.. ..++.++|||+|||+||||++ |+.||.+....+++++|-+.-
T Consensus 265 ned~Yvm~p~rkvPfAWCaPEsLrh-~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~e----------- 332 (1039)
T KOG0199|consen 265 NEDMYVMAPQRKVPFAWCAPESLRH-RKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGE----------- 332 (1039)
T ss_pred CCcceEecCCCcCcccccCHhHhcc-ccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccc-----------
Confidence 43322 112233667999999886 789999999999999999998 889999999999988874311
Q ss_pred CCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcc
Q 011763 361 KLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEY 415 (478)
Q Consensus 361 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~ 415 (478)
....-+.+++++.+++..|+..+|+.|||...+.+.-+
T Consensus 333 -----------------rLpRPk~csedIY~imk~cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 333 -----------------RLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred -----------------cCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence 11122468999999999999999999999988864433
No 390
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-35 Score=292.53 Aligned_cols=246 Identities=20% Similarity=0.333 Sum_probs=204.3
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
+....++||-|.||.||.+.++.-...||||.++.+. -..+.|+.|+.+|+.++|||+|+|+++|+. +..+|||.
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt---MeveEFLkEAAvMKeikHpNLVqLLGVCT~--EpPFYIiT 342 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTH--EPPFYIIT 342 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhcc---hhHHHHHHHHHHHHhhcCccHHHHhhhhcc--CCCeEEEE
Confidence 5667799999999999999999888999999997554 345678889999999999999999999988 56799999
Q ss_pred eeccC-CchhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 211 EYMEH-DITGLLSCPD-IKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 211 e~~~~-~ll~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
|||.. +|++.+...+ ..++...+.+++.||..|+.||..+++|||||-..|+|+.++..|||+|||+++++..+....
T Consensus 343 EfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTA 422 (1157)
T KOG4278|consen 343 EFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTA 422 (1157)
T ss_pred ecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceec
Confidence 99985 6777776544 346777888999999999999999999999999999999999999999999999887654443
Q ss_pred ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccc
Q 011763 289 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATL 367 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 367 (478)
.....-..-|.|||-|.- ..++.++|||+|||+|||+.| |-.||.+.+....+..+.+.. +
T Consensus 423 HAGAKFPIKWTAPEsLAy-NtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgy-----------R------ 484 (1157)
T KOG4278|consen 423 HAGAKFPIKWTAPESLAY-NTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGY-----------R------ 484 (1157)
T ss_pred ccCccCcccccCcccccc-cccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccc-----------c------
Confidence 333334778999999875 678999999999999999998 889999987655543332210 0
Q ss_pred cCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHH
Q 011763 368 FKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAA 410 (478)
Q Consensus 368 ~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~ 410 (478)
- +....+|+.+.+|++.|++|.|..||+..|+
T Consensus 485 --M---------~~PeGCPpkVYeLMraCW~WsPsDRPsFaei 516 (1157)
T KOG4278|consen 485 --M---------DGPEGCPPKVYELMRACWNWSPSDRPSFAEI 516 (1157)
T ss_pred --c---------cCCCCCCHHHHHHHHHHhcCCcccCccHHHH
Confidence 0 0113689999999999999999999998876
No 391
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=306.42 Aligned_cols=249 Identities=28% Similarity=0.421 Sum_probs=190.7
Q ss_pred ceeeeeeeeecCceE-EEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCceEEE
Q 011763 131 AFEKLEKIGQGTYSS-VFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~-V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~l 208 (478)
-|.-.+.+|.|+.|+ ||+|.- .++.||||.+- .+......+||..|+.. +|||||+++ |.+....+.||
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll-----~e~~~~A~rEi~lL~eSD~H~NviRyy--c~E~d~qF~YI 580 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVY--EGREVAVKRLL-----EEFFDFAQREIQLLQESDEHPNVIRYY--CSEQDRQFLYI 580 (903)
T ss_pred eeccHHHcccCCCCcEEEEEee--CCceehHHHHh-----hHhHHHHHHHHHHHHhccCCCceEEEE--eeccCCceEEE
Confidence 355567789999987 799975 67899999874 34556778999999998 699999995 45555789999
Q ss_pred EEeeccCCchhhccCC--CCCC-CHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEec---C--CcEEEeecccccc
Q 011763 209 VFEYMEHDITGLLSCP--DIKF-SEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNN---E--GVLKLADFGLANF 280 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~--~~~l-~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~---~--~~vkl~DFG~a~~ 280 (478)
..|.|..+|.+.+... .... .....+.++.|++.||++||+.+||||||||.||||+. + ..++|+|||+++.
T Consensus 581 alELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk 660 (903)
T KOG1027|consen 581 ALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK 660 (903)
T ss_pred EehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence 9999999888777653 1111 11456788899999999999999999999999999987 3 4689999999987
Q ss_pred cCCCCCC--CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHcCCCCchhh
Q 011763 281 SNTGHRQ--PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIG-KPILQGRTEVEQLHKIFKLCGSPPDDYW 357 (478)
Q Consensus 281 ~~~~~~~--~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG-~~pf~~~~~~~~~~~i~~~~g~~~~~~~ 357 (478)
...+... ...+..||-+|+|||++... .-+.++|||||||++|+.++| ..||...- +...+|+... .
T Consensus 661 l~~~~sS~~r~s~~sGt~GW~APE~L~~~-~~~~avDiFslGCvfyYvltgG~HpFGd~~--~R~~NIl~~~--~----- 730 (903)
T KOG1027|consen 661 LAGGKSSFSRLSGGSGTSGWQAPEQLRED-RKTQAVDIFSLGCVFYYVLTGGSHPFGDSL--ERQANILTGN--Y----- 730 (903)
T ss_pred cCCCcchhhcccCCCCcccccCHHHHhcc-ccCcccchhhcCceEEEEecCCccCCCchH--HhhhhhhcCc--c-----
Confidence 7654322 23456789999999999874 346799999999999999985 89997533 2223333211 0
Q ss_pred ccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccC
Q 011763 358 KKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFS 417 (478)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~ 417 (478)
.+...-+....++.|||.+||++||..||+|.++|.||||=
T Consensus 731 -------------------~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW 771 (903)
T KOG1027|consen 731 -------------------TLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFW 771 (903)
T ss_pred -------------------ceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccC
Confidence 11111111222899999999999999999999999999993
No 392
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-34 Score=251.67 Aligned_cols=216 Identities=25% Similarity=0.442 Sum_probs=179.4
Q ss_pred ccccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCce
Q 011763 127 LRADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSCS 205 (478)
Q Consensus 127 ~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~ 205 (478)
+..+...-+..||+|+||.|-+.++..+|+..|+|.+.... +.+..+++++|+.+..+. .+|++|.+++.+.. ...
T Consensus 43 V~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv-n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r--egd 119 (282)
T KOG0984|consen 43 VPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV-NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR--EGD 119 (282)
T ss_pred cchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc-ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhc--ccc
Confidence 33567778889999999999999999999999999997654 345556677899988776 79999999998766 566
Q ss_pred EEEEEeeccCCchhhc---cCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCcEEEecCCcEEEeeccccccc
Q 011763 206 IYLVFEYMEHDITGLL---SCPDIKFSEAQIKCYMNQLLHGLEHCHSR-GVLHRDIKGSNLLVNNEGVLKLADFGLANFS 281 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~---~~~~~~l~~~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~~~~vkl~DFG~a~~~ 281 (478)
+++.||.|.-++..+. ...+..++|..+-+|+..++.||.|||++ .|||||+||+||||+.+|++||||||.+-..
T Consensus 120 vwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L 199 (282)
T KOG0984|consen 120 VWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYL 199 (282)
T ss_pred EEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceee
Confidence 9999999987654333 45677899999999999999999999987 8999999999999999999999999998655
Q ss_pred CCCCCCCccccccCCcccCcccccC---CCCCCChhhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHH
Q 011763 282 NTGHRQPLTSRVVTLWYRPPELLLG---ATDYGPSVDLWSVGCVFAELLIGKPILQG-RTEVEQLHKIFK 347 (478)
Q Consensus 282 ~~~~~~~~~~~~~t~~y~APE~l~~---~~~~~~~~DiwslG~il~elltG~~pf~~-~~~~~~~~~i~~ 347 (478)
... -..+-..|...|||||.+.. ...|+-++||||||+.++||.+++.||.. .++.+++.++++
T Consensus 200 ~dS--iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe 267 (282)
T KOG0984|consen 200 VDS--IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE 267 (282)
T ss_pred hhh--hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence 432 11222456778999999853 34689999999999999999999999965 678888888876
No 393
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.2e-33 Score=320.41 Aligned_cols=250 Identities=22% Similarity=0.320 Sum_probs=184.9
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
..|...+.||+|+||.||+|++..++..||+|++...... ...|+.++++++|||||++++++.+ ....|+|
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~l~~l~HpnIv~~~~~~~~--~~~~~lv 761 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI------PSSEIADMGKLQHPNIVKLIGLCRS--EKGAYLI 761 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc------cHHHHHHHhhCCCCCcceEEEEEEc--CCCCEEE
Confidence 3567778999999999999999889999999998643211 1246889999999999999999987 5668999
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCH---SRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
|||++++.+..+.. .+++..+..++.||+.||+||| +.+|+||||||+||+++.++..++. |+........
T Consensus 762 ~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~-- 835 (968)
T PLN00113 762 HEYIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD-- 835 (968)
T ss_pred EeCCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC--
Confidence 99999876666553 3789999999999999999999 6699999999999999998888775 6655432211
Q ss_pred CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHcC-CCCchhhccCCCCC
Q 011763 287 QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTE-VEQLHKIFKLCG-SPPDDYWKKSKLPH 364 (478)
Q Consensus 287 ~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~-~~~~~~i~~~~g-~~~~~~~~~~~~~~ 364 (478)
....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ...+........ ......|
T Consensus 836 ---~~~~~t~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 904 (968)
T PLN00113 836 ---TKCFISSAYVAPETRET-KDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMW------- 904 (968)
T ss_pred ---CCccccccccCcccccC-CCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhhe-------
Confidence 22366899999999876 6789999999999999999999999854221 011111111100 0000000
Q ss_pred ccccCCCCCCCccchhcc---cCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 365 ATLFKPQQPYDSSLRETF---KDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 365 ~~~~~~~~~~~~~l~~~~---~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
.+..+.... .....++.+++.+||+.||++|||+.|+++.
T Consensus 905 ---------~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 905 ---------IDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred ---------eCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 000000000 1123357889999999999999999999865
No 394
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=291.94 Aligned_cols=260 Identities=30% Similarity=0.439 Sum_probs=220.7
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|+.+..+|.|.||.||+++++.+++..|+|+++.+. .....-+.+|+-+++.++|||||.+++.+.. ...+++
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep--~dd~~~iqqei~~~~dc~h~nivay~gsylr--~dklwi 89 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEP--GDDFSGIQQEIGMLRDCRHPNIVAYFGSYLR--RDKLWI 89 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccC--CccccccccceeeeecCCCcChHHHHhhhhh--hcCcEE
Confidence 568999999999999999999999999999999998765 3445567789999999999999999998876 566899
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP 288 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 288 (478)
.||||+++.++.+..-.+++++.++.+.++..++||+|||++|-+|||||-.|||+++.|.+||.|||.+..+..- ...
T Consensus 90 cMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitat-i~K 168 (829)
T KOG0576|consen 90 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITAT-IAK 168 (829)
T ss_pred EEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhh-hhh
Confidence 9999999999888888889999999999999999999999999999999999999999999999999998655431 223
Q ss_pred ccccccCCcccCccccc--CCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcc
Q 011763 289 LTSRVVTLWYRPPELLL--GATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHAT 366 (478)
Q Consensus 289 ~~~~~~t~~y~APE~l~--~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 366 (478)
...++||+.|||||+.. ....|...+|||++|+...||-.-++|.........+..+-.....||.-
T Consensus 169 rksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~l----------- 237 (829)
T KOG0576|consen 169 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTL----------- 237 (829)
T ss_pred hhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcc-----------
Confidence 45689999999999852 33579999999999999999988888877666666666655544433310
Q ss_pred ccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccC
Q 011763 367 LFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFS 417 (478)
Q Consensus 367 ~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~ 417 (478)
++ -...++.+-+|++.+|..+|.+|||++.+|.|||..
T Consensus 238 ------------kD-k~kws~~fh~fvK~altknpKkRptaeklL~h~fvs 275 (829)
T KOG0576|consen 238 ------------KD-KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVS 275 (829)
T ss_pred ------------cC-CccchHHHHHHHHHHhcCCCccCCChhhheeceeec
Confidence 00 124567899999999999999999999999999985
No 395
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-33 Score=280.76 Aligned_cols=203 Identities=27% Similarity=0.431 Sum_probs=175.9
Q ss_pred cccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHH------HHHHHHHHHHHHhcC---CCCeeeeccee
Q 011763 128 RADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPES------VRFMAREILILRRLD---HPNIIKLEGLI 198 (478)
Q Consensus 128 ~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~------~~~~~~E~~~l~~l~---h~nIv~l~~~~ 198 (478)
+..+|..++.||.|+||.|++|.++.+...|+||.+.++..-.+. .-.+..||+||..|+ |+||++++++|
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 455799999999999999999999999999999999876432111 122345999999996 99999999999
Q ss_pred eecCCceEEEEEeeccCC-chhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeeccc
Q 011763 199 TSRLSCSIYLVFEYMEHD-ITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGL 277 (478)
Q Consensus 199 ~~~~~~~~~lv~e~~~~~-ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~ 277 (478)
++ .+++||+||.-..+ .+..++.....++|.+++.|++|++.|+++||++||||||||-+||+++.+|-+||+|||.
T Consensus 639 Ed--dd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgs 716 (772)
T KOG1152|consen 639 ED--DDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGS 716 (772)
T ss_pred ec--CCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccc
Confidence 98 78999999987643 3555566667899999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCC
Q 011763 278 ANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQG 335 (478)
Q Consensus 278 a~~~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~ 335 (478)
|..... .+....+||..|.|||++.|..+.+..-|||+||++||.++....||..
T Consensus 717 aa~~ks---gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 717 AAYTKS---GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred hhhhcC---CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 987765 4556788999999999999877788899999999999999998888863
No 396
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=9.4e-33 Score=269.14 Aligned_cols=265 Identities=23% Similarity=0.288 Sum_probs=186.9
Q ss_pred cccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc--CCCCeeeecceeeecC--C
Q 011763 128 RADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL--DHPNIIKLEGLITSRL--S 203 (478)
Q Consensus 128 ~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l--~h~nIv~l~~~~~~~~--~ 203 (478)
..+..++++.||+|.||.||+|+. +++.||||++. .+....+.+|.+|.... .|+||++++++-.... .
T Consensus 208 ~l~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp-----~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~ 280 (534)
T KOG3653|consen 208 ELDPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFP-----EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADR 280 (534)
T ss_pred cCCchhhHHHhhcCccceeehhhc--cCceeEEEecC-----HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccc
Confidence 356788899999999999999985 56999999986 45566677788777754 8999999987653211 3
Q ss_pred ceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---------CceeccCCCCcEEEecCCcEEEee
Q 011763 204 CSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSR---------GVLHRDIKGSNLLVNNEGVLKLAD 274 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---------givHrDlkp~NILl~~~~~vkl~D 274 (478)
..++||++|.+.+.|..++..+ .+++....+++..|++||+|||+- .|+|||||..||||..|++.-|+|
T Consensus 281 ~eywLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD 359 (534)
T KOG3653|consen 281 MEYWLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD 359 (534)
T ss_pred cceeEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence 3689999999987766665544 689999999999999999999963 499999999999999999999999
Q ss_pred cccccccCCCCC-CCccccccCCcccCcccccCCCCCC-----ChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 011763 275 FGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYG-----PSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKL 348 (478)
Q Consensus 275 FG~a~~~~~~~~-~~~~~~~~t~~y~APE~l~~~~~~~-----~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~ 348 (478)
||+|..+..+.. ......+||..|||||+|.+...+. .+.||||+|.+||||++.-..+......+...-.-..
T Consensus 360 FGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~e 439 (534)
T KOG3653|consen 360 FGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAE 439 (534)
T ss_pred cceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHH
Confidence 999987654322 2334578999999999998755444 3689999999999999865433211100100001111
Q ss_pred cCCCC--chhhccCCCCCccccCCCCCCCccchhccc--CCchhHHHHHHHhcCCCCCCccCHHH
Q 011763 349 CGSPP--DDYWKKSKLPHATLFKPQQPYDSSLRETFK--DLPTTAVNLIETLLSVEPYKRATASA 409 (478)
Q Consensus 349 ~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~l~~Li~~mL~~dP~~R~ta~e 409 (478)
+|.-| ++.|... ..... .+.+...|. .-..-+.+.|+.|+..||+.|+||.=
T Consensus 440 vG~hPt~e~mq~~V------V~kK~---RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~C 495 (534)
T KOG3653|consen 440 VGNHPTLEEMQELV------VRKKQ---RPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGC 495 (534)
T ss_pred hcCCCCHHHHHHHH------Hhhcc---CCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHH
Confidence 12111 1111000 00000 001111121 22345789999999999999999853
No 397
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=1.5e-31 Score=285.76 Aligned_cols=251 Identities=24% Similarity=0.372 Sum_probs=198.9
Q ss_pred ccceeeeeeeeecCceEEEEEEEC----C---CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeee
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDL----D---TGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITS 200 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~----~---~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 200 (478)
.++.++.+.||+|.||.||++.-. . ....||||.++..... ...+.+..|+++|+.+ .|+||+.+++++..
T Consensus 295 ~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~ 373 (609)
T KOG0200|consen 295 RENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQ 373 (609)
T ss_pred hhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeecc
Confidence 445567779999999999999632 1 1457999998765544 6778889999999999 79999999999988
Q ss_pred cCCceEEEEEeeccCC-chhhccCCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEE
Q 011763 201 RLSCSIYLVFEYMEHD-ITGLLSCPD---------------IKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLV 264 (478)
Q Consensus 201 ~~~~~~~lv~e~~~~~-ll~~~~~~~---------------~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl 264 (478)
.+.+++|+||+..+ ++..+.... ..++..++..++.||+.|++||++..+|||||-..||||
T Consensus 374 --~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi 451 (609)
T KOG0200|consen 374 --DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLI 451 (609)
T ss_pred --CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEe
Confidence 67899999999964 555544433 248999999999999999999999999999999999999
Q ss_pred ecCCcEEEeecccccccCCCCCCCccccc--cCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCC-hHH
Q 011763 265 NNEGVLKLADFGLANFSNTGHRQPLTSRV--VTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRT-EVE 340 (478)
Q Consensus 265 ~~~~~vkl~DFG~a~~~~~~~~~~~~~~~--~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~-~~~ 340 (478)
..+..+||+|||+|+.............. ....|||||.+.. ..|+.++||||||++||||++ |..||.+.. ..+
T Consensus 452 ~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~-~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~ 530 (609)
T KOG0200|consen 452 TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD-RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEE 530 (609)
T ss_pred cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc-CcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHH
Confidence 99999999999999865433222111111 3556999999987 889999999999999999999 889999855 444
Q ss_pred HHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHH
Q 011763 341 QLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAAL 411 (478)
Q Consensus 341 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L 411 (478)
.++.+... ... +.....++++.++++.|++.+|++||+..++.
T Consensus 531 l~~~l~~G-~r~---------------------------~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~ 573 (609)
T KOG0200|consen 531 LLEFLKEG-NRM---------------------------EQPEHCSDEIYDLMKSCWNADPEDRPTFSECV 573 (609)
T ss_pred HHHHHhcC-CCC---------------------------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHH
Confidence 44332221 000 11135688999999999999999999998876
No 398
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=2.8e-32 Score=279.78 Aligned_cols=249 Identities=20% Similarity=0.282 Sum_probs=200.7
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCc----EEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCce
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGK----IVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCS 205 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~----~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 205 (478)
...+..++||.|+||+||+|.+...++ +||||++.... .......+++|+.+|.+|+|||+++|++++... .
T Consensus 696 telkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t-~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s---~ 771 (1177)
T KOG1025|consen 696 TELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT-SPKASIELLDEALRMASLDHPNLLRLLGVCMLS---T 771 (1177)
T ss_pred hhhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC-CchhhHHHHHHHHHHhcCCCchHHHHhhhcccc---h
Confidence 356677899999999999998765454 68999987544 345566788999999999999999999999763 3
Q ss_pred EEEEEeeccC-CchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC
Q 011763 206 IYLVFEYMEH-DITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG 284 (478)
Q Consensus 206 ~~lv~e~~~~-~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~ 284 (478)
+.||++|++. .|++.+...+..+-.+....|..||++||.|||++.+|||||-..||||.....+||.|||+++.....
T Consensus 772 ~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 7799999996 566777777778999999999999999999999999999999999999999999999999999877654
Q ss_pred CCCCcc-ccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCC
Q 011763 285 HRQPLT-SRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL 362 (478)
Q Consensus 285 ~~~~~~-~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 362 (478)
...... .-...+-|||-|.+.. ..|+.++|||||||++|||+| |..|+.+....++-.. ++.-...
T Consensus 852 ~~ey~~~~gK~pikwmale~i~~-~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dl-le~geRL---------- 919 (1177)
T KOG1025|consen 852 EKEYSAPGGKVPIKWMALESIRI-RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDL-LEKGERL---------- 919 (1177)
T ss_pred cccccccccccCcHHHHHHHhhc-cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHH-HhccccC----------
Confidence 332221 2223677999998876 789999999999999999998 9999998876554322 2210000
Q ss_pred CCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHH
Q 011763 363 PHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAAL 411 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L 411 (478)
...+..+.++.-++.+||..|+..||+++++.
T Consensus 920 -----------------sqPpiCtiDVy~~mvkCwmid~~~rp~fkel~ 951 (1177)
T KOG1025|consen 920 -----------------SQPPICTIDVYMVMVKCWMIDADSRPTFKELA 951 (1177)
T ss_pred -----------------CCCCCccHHHHHHHHHHhccCcccCccHHHHH
Confidence 00135677889999999999999999998865
No 399
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=5.6e-30 Score=235.78 Aligned_cols=213 Identities=38% Similarity=0.613 Sum_probs=179.1
Q ss_pred eeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeeccCCc
Q 011763 138 IGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHDI 217 (478)
Q Consensus 138 LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~~~l 217 (478)
||.|.+|.||++.+..+++.+++|++....... ....+.+|+.+++.+.|++|+++++++.. ....+++||++.+..
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~~~~~~e~~~~~~ 77 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFED--ENHLYLVMEYCEGGS 77 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeec--CCeEEEEEecCCCCc
Confidence 689999999999998889999999998654322 34678899999999999999999999877 477899999999655
Q ss_pred hhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEec-CCcEEEeecccccccCCCCCCCccccccC
Q 011763 218 TGLLSCPD-IKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNN-EGVLKLADFGLANFSNTGHRQPLTSRVVT 295 (478)
Q Consensus 218 l~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~-~~~vkl~DFG~a~~~~~~~~~~~~~~~~t 295 (478)
+..+.... ..+++..+..++.+++.+|.+||++|++|+||+|.||+++. ++.++|+|||.+........ ........
T Consensus 78 l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~ 156 (215)
T cd00180 78 LKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTIVGT 156 (215)
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcccCC
Confidence 54444332 46899999999999999999999999999999999999999 89999999999976654321 12334567
Q ss_pred CcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCC
Q 011763 296 LWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYD 375 (478)
Q Consensus 296 ~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (478)
..|++||.+.....++.+.|+|+||+++++|
T Consensus 157 ~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------------- 187 (215)
T cd00180 157 PAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------------- 187 (215)
T ss_pred CCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------------
Confidence 8899999887633778899999999999999
Q ss_pred ccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCc
Q 011763 376 SSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASE 414 (478)
Q Consensus 376 ~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp 414 (478)
..+.++|..||..||++||++.++++|+
T Consensus 188 -----------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 -----------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred -----------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 1357799999999999999999999875
No 400
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=8e-31 Score=253.93 Aligned_cols=249 Identities=25% Similarity=0.289 Sum_probs=182.5
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHh--cCCCCeeeecceeeecCC--c
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRR--LDHPNIIKLEGLITSRLS--C 204 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~~~~--~ 204 (478)
..+..+.+.||+|.||.||+|.+ .|+.||||++... ....+.+|.+|.+. |+|+||+.+++.-....+ -
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~sr-----dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~T 282 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSR-----DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWT 282 (513)
T ss_pred hheeEEEEEecCccccceeeccc--cCCceEEEEeccc-----chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceE
Confidence 34789999999999999999987 4789999999622 22345567777765 499999999876543222 2
Q ss_pred eEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CceeccCCCCcEEEecCCcEEEeecc
Q 011763 205 SIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSR--------GVLHRDIKGSNLLVNNEGVLKLADFG 276 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~--------givHrDlkp~NILl~~~~~vkl~DFG 276 (478)
.+|||.+|-+.+.|.+++.. ..++.+....++..++.||+|||.. .|.|||||..||||..++..-|+|+|
T Consensus 283 QLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLG 361 (513)
T KOG2052|consen 283 QLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 361 (513)
T ss_pred EEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeece
Confidence 58999999998877777766 4789999999999999999999953 39999999999999999999999999
Q ss_pred cccccCCCC---CCCccccccCCcccCcccccCCCCC-----CChhhHHHHHHHHHHHHhC----------CCCCCCC--
Q 011763 277 LANFSNTGH---RQPLTSRVVTLWYRPPELLLGATDY-----GPSVDLWSVGCVFAELLIG----------KPILQGR-- 336 (478)
Q Consensus 277 ~a~~~~~~~---~~~~~~~~~t~~y~APE~l~~~~~~-----~~~~DiwslG~il~elltG----------~~pf~~~-- 336 (478)
+|....... ....+.++||..|||||+|...... -..+||||||.+|||++.. ++||..-
T Consensus 362 LAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp 441 (513)
T KOG2052|consen 362 LAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVP 441 (513)
T ss_pred eeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCC
Confidence 996554332 2344668999999999998653221 1258999999999999752 3555432
Q ss_pred --ChHHHHHHHHH--HcCCCCchhhccCCCCCccccCCCCCCCccchhcccCC--chhHHHHHHHhcCCCCCCccCHHHH
Q 011763 337 --TEVEQLHKIFK--LCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDL--PTTAVNLIETLLSVEPYKRATASAA 410 (478)
Q Consensus 337 --~~~~~~~~i~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~l~~Li~~mL~~dP~~R~ta~e~ 410 (478)
...+.+.+++- .+.+..+.. |... =..+-.||+.|+..+|.-|.||-.+
T Consensus 442 ~DPs~eeMrkVVCv~~~RP~ipnr-------------------------W~s~~~l~~m~klMkeCW~~Np~aRltALri 496 (513)
T KOG2052|consen 442 SDPSFEEMRKVVCVQKLRPNIPNR-------------------------WKSDPALRVMAKLMKECWYANPAARLTALRI 496 (513)
T ss_pred CCCCHHHHhcceeecccCCCCCcc-------------------------cccCHHHHHHHHHHHHhhcCCchhhhHHHHH
Confidence 22222222211 111111111 1111 1246788999999999999998665
No 401
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=1.3e-29 Score=237.15 Aligned_cols=211 Identities=37% Similarity=0.591 Sum_probs=173.6
Q ss_pred eeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEe
Q 011763 132 FEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFE 211 (478)
Q Consensus 132 y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e 211 (478)
|.+.+.||.|++++||++.+..+++.+|+|.+...... ...+.+.+|+..++.++|+|++++++++.. ....++++|
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~--~~~~~~v~e 77 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFED--PEPLYLVME 77 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeec--CCceEEEEe
Confidence 56789999999999999999888999999999865432 256778889999999999999999998876 567899999
Q ss_pred eccCCchhhccCCCCC-CCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCcc
Q 011763 212 YMEHDITGLLSCPDIK-FSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLT 290 (478)
Q Consensus 212 ~~~~~ll~~~~~~~~~-l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~ 290 (478)
|+++..+..+...... +++..+..++.|++.+|.+||+++++|+||+|.||+++.++.++|+|||++............
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (225)
T smart00221 78 YCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLK 157 (225)
T ss_pred ccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccccc
Confidence 9998555444433334 899999999999999999999999999999999999999999999999999776543211223
Q ss_pred ccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCC-CChH-HHHHHH
Q 011763 291 SRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQG-RTEV-EQLHKI 345 (478)
Q Consensus 291 ~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~-~~~~-~~~~~i 345 (478)
...++..|++||.+.....++.++|||+||+++++|++|++||.. .... .....+
T Consensus 158 ~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~ 214 (225)
T smart00221 158 TVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVW 214 (225)
T ss_pred ceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHH
Confidence 446678899999874346678899999999999999999999977 3444 344444
No 402
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=2.5e-31 Score=294.31 Aligned_cols=203 Identities=18% Similarity=0.209 Sum_probs=146.0
Q ss_pred hcCC-CCeeeecceeeec-----CCceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCC
Q 011763 185 RLDH-PNIIKLEGLITSR-----LSCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIK 258 (478)
Q Consensus 185 ~l~h-~nIv~l~~~~~~~-----~~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlk 258 (478)
.+.| .||++++++|... ....++++||+++++|...+......+++..++.++.||+.||+|||++||+|||||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlK 107 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVR 107 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Confidence 3445 5777788877221 124578889999888777776656679999999999999999999999999999999
Q ss_pred CCcEEEecCC-------------------cEEEeecccccccCCCC---------------CCCccccccCCcccCcccc
Q 011763 259 GSNLLVNNEG-------------------VLKLADFGLANFSNTGH---------------RQPLTSRVVTLWYRPPELL 304 (478)
Q Consensus 259 p~NILl~~~~-------------------~vkl~DFG~a~~~~~~~---------------~~~~~~~~~t~~y~APE~l 304 (478)
|+||||+..+ .+||+|||+++...... .......++|++|||||++
T Consensus 108 P~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 187 (793)
T PLN00181 108 PSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEED 187 (793)
T ss_pred chhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhh
Confidence 9999996544 45555666554321000 0001123578999999998
Q ss_pred cCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccC
Q 011763 305 LGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKD 384 (478)
Q Consensus 305 ~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 384 (478)
.+ ..|+.++|||||||+||||++|.+||.... ..+..+.... .+... ..
T Consensus 188 ~~-~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~--~~~~~--------------------------~~ 236 (793)
T PLN00181 188 NG-SSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRV--LPPQI--------------------------LL 236 (793)
T ss_pred cc-CCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhh--cChhh--------------------------hh
Confidence 87 678999999999999999999998876322 1222221111 01000 01
Q ss_pred CchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 385 LPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 385 ~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
......+++.+||+.||.+||++.|+|+||||.+
T Consensus 237 ~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~ 270 (793)
T PLN00181 237 NWPKEASFCLWLLHPEPSCRPSMSELLQSEFINE 270 (793)
T ss_pred cCHHHHHHHHHhCCCChhhCcChHHHhhchhhhh
Confidence 1334678999999999999999999999999976
No 403
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.4e-31 Score=240.37 Aligned_cols=258 Identities=24% Similarity=0.305 Sum_probs=195.0
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCceEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~ 207 (478)
.+.|.|.+.||+|-||.+.+|+++.+++.+++|.+.... ...+.+.+|...--.| .|.||+.-|++..+. .+.++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~---tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt-~d~Yv 98 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ---TTQADFVREFHYSFFLSPHQHIIDTYEVAFQT-SDAYV 98 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch---hhHHHHHHHhccceeeccchhhhHHHHHHhhc-CceEE
Confidence 468999999999999999999999999999999997654 3346677787765555 699999988764333 56788
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecC--CcEEEeecccccccCCCC
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE--GVLKLADFGLANFSNTGH 285 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~--~~vkl~DFG~a~~~~~~~ 285 (478)
+++||++.+.|..-... ..+-|...+.++.|++.||.|+|++++||||||.+||||-+. ..|||||||+.+..+.-
T Consensus 99 F~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t- 176 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT- 176 (378)
T ss_pred EeeccCccchhhhhcCc-ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCce-
Confidence 99999997655444333 357899999999999999999999999999999999999543 58999999998755421
Q ss_pred CCCccccccCCcccCcccccC----CCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCC
Q 011763 286 RQPLTSRVVTLWYRPPELLLG----ATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK 361 (478)
Q Consensus 286 ~~~~~~~~~t~~y~APE~l~~----~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 361 (478)
.....-+..|.+||++.. .....+.+|||.||+++|.+++|.+||+.....+ ..+|+-.+
T Consensus 177 ---V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d-------------~~Y~~~~~ 240 (378)
T KOG1345|consen 177 ---VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMD-------------KPYWEWEQ 240 (378)
T ss_pred ---ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccC-------------chHHHHHH
Confidence 111223566999998642 2235778999999999999999999998433221 11221111
Q ss_pred CCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCc---cCHHHHHhCccc
Q 011763 362 LPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKR---ATASAALASEYF 416 (478)
Q Consensus 362 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R---~ta~e~L~hp~f 416 (478)
+. +.....+.+.|..+++.+..+.++-|..+|+.| .++......-|.
T Consensus 241 w~--------~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~ 290 (378)
T KOG1345|consen 241 WL--------KRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWK 290 (378)
T ss_pred Hh--------cccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHH
Confidence 11 111224456678899999999999999999999 677766666665
No 404
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.96 E-value=6.1e-29 Score=237.04 Aligned_cols=253 Identities=20% Similarity=0.287 Sum_probs=202.4
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCC-----cEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTG-----KIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLS 203 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~-----~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 203 (478)
.++++....+-+|.||.||.|.+++.+ +.|.+|.++. ...+-+...++.|.-.|..+.|||+..+.+++.+. .
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~-~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~-~ 360 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQ-HASQIQVNLLLQESMLLYGASHPNLLSVLGVSIED-Y 360 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHh-cccHHHHHHHHHHHHHHhcCcCCCccceeEEEeec-c
Confidence 567888899999999999999765433 3466777653 33566778888999999999999999999988764 4
Q ss_pred ceEEEEEeeccCCchh-hcc-----C--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeec
Q 011763 204 CSIYLVFEYMEHDITG-LLS-----C--PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADF 275 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~-~~~-----~--~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DF 275 (478)
...+.++.+++-+.+. ++. . ....++..++..++.||+.|++|||+++|||.||-..|++|++..++||+|=
T Consensus 361 ~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDs 440 (563)
T KOG1024|consen 361 ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDS 440 (563)
T ss_pred CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccc
Confidence 5677888888854433 333 1 1234778889999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCcccc-ccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCC
Q 011763 276 GLANFSNTGHRQPLTSR-VVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPP 353 (478)
Q Consensus 276 G~a~~~~~~~~~~~~~~-~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~ 353 (478)
.+++..-+.+....... .-+..||+||.+.+ ..|+.++|+||||++||||+| |+.|+...+..+...-+.+..
T Consensus 441 aLSRDLFP~DYhcLGDnEnRPvkWMslEal~n-~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGy---- 515 (563)
T KOG1024|consen 441 ALSRDLFPGDYHCLGDNENRPVKWMSLEALQN-SHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGY---- 515 (563)
T ss_pred hhccccCcccccccCCCCCCcccccCHHHHhh-hhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccc----
Confidence 99987655444333322 22567999999987 789999999999999999999 999999998888776664421
Q ss_pred chhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHh
Q 011763 354 DDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALA 412 (478)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~ 412 (478)
+..+| -+.|+++..++.-|+..+|++||+.+|+..
T Consensus 516 ---------------RlaQP---------~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 516 ---------------RLAQP---------FNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred ---------------eecCC---------CCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 11122 268999999999999999999999999863
No 405
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=1.6e-29 Score=267.27 Aligned_cols=265 Identities=26% Similarity=0.336 Sum_probs=202.1
Q ss_pred eeeeeeeecCceEEEEEEECCCCcEEEEEEeec----CCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 133 EKLEKIGQGTYSSVFRARDLDTGKIVALKKVRF----DNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 133 ~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~----~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
...+.+|.|++|.|+.+......+.++.|.++. ..........+..|+.+-..|.|+|++..+..+.+. ...+.
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~--~~~~~ 398 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI--DGILQ 398 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc--ccchh
Confidence 456789999999899888777666677776542 221222223366788888899999998888777663 33444
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC--
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-- 286 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~-- 286 (478)
+||||++ .+..+......++..++..+++||+.||+|||+.||.|||||++|++++.+|.+||+|||.+.....+..
T Consensus 399 ~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~ 477 (601)
T KOG0590|consen 399 SMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKN 477 (601)
T ss_pred hhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchh
Confidence 5999999 5555555556799999999999999999999999999999999999999999999999999976654333
Q ss_pred -CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHHHcCCCCchhhccCCCCC
Q 011763 287 -QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLH-KIFKLCGSPPDDYWKKSKLPH 364 (478)
Q Consensus 287 -~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~-~i~~~~g~~~~~~~~~~~~~~ 364 (478)
......+|+..|+|||++.+.......+||||.|++++.|++|+.||+.....+... .+..
T Consensus 478 ~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~----------------- 540 (601)
T KOG0590|consen 478 IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNY----------------- 540 (601)
T ss_pred hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcc-----------------
Confidence 345667889999999999885555567899999999999999999998654433221 1000
Q ss_pred ccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCC
Q 011763 365 ATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPY 421 (478)
Q Consensus 365 ~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~ 421 (478)
.............+..++...+.+|.+||++||.+|+|+++||+.+||+....
T Consensus 541 ----~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~ 593 (601)
T KOG0590|consen 541 ----SDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIEC 593 (601)
T ss_pred ----ccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcce
Confidence 00001111223344578899999999999999999999999999999987654
No 406
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.95 E-value=7.4e-28 Score=217.78 Aligned_cols=164 Identities=21% Similarity=0.291 Sum_probs=125.2
Q ss_pred chhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccccCC
Q 011763 217 ITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTL 296 (478)
Q Consensus 217 ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~t~ 296 (478)
|.+.+......+++..++.++.||+.||.|||+++ ||+|||++.++.+|+ ||++...... ...+|+
T Consensus 3 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~------~~~g~~ 68 (176)
T smart00750 3 LADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE------QSRVDP 68 (176)
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc------cCCCcc
Confidence 44444444557999999999999999999999998 999999999999999 9999765432 125789
Q ss_pred cccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCC
Q 011763 297 WYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEV-EQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYD 375 (478)
Q Consensus 297 ~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~-~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (478)
.|+|||++.+ ..++.++|||||||++|||++|++||...... ..+..+........ . ..
T Consensus 69 ~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~----------------~~ 128 (176)
T smart00750 69 YFMAPEVIQG-QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADD---P----------------RD 128 (176)
T ss_pred cccChHHhcC-CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCC---c----------------cc
Confidence 9999999986 67899999999999999999999999765443 22333322111000 0 00
Q ss_pred ccchhcccCCch--hHHHHHHHhcCCCCCCccCHHHHHhCcccC
Q 011763 376 SSLRETFKDLPT--TAVNLIETLLSVEPYKRATASAALASEYFS 417 (478)
Q Consensus 376 ~~l~~~~~~~~~--~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~ 417 (478)
. .....++. .+.+||.+||..||.+|||+.++++|+|+.
T Consensus 129 ~---~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 129 R---SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred c---ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 0 00012333 699999999999999999999999999975
No 407
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.94 E-value=5.9e-25 Score=215.34 Aligned_cols=262 Identities=34% Similarity=0.508 Sum_probs=205.4
Q ss_pred eeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChH-HHHHHHHHHHHHHhcCCC-CeeeecceeeecCCceEEEE
Q 011763 132 FEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPE-SVRFMAREILILRRLDHP-NIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 132 y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~-~~~~~~~E~~~l~~l~h~-nIv~l~~~~~~~~~~~~~lv 209 (478)
|.+...||.|+|+.||++.+. ..+++|.+........ ....+.+|+.++..+.|+ +|+++++++.. ....+++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~ 76 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQD--EGSLYLV 76 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEec--CCEEEEE
Confidence 788999999999999999986 7899999976654432 567788999999999888 79999999855 4558999
Q ss_pred EeeccCCchhhccCCCC---CCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCC-cEEEeecccccccCCCC
Q 011763 210 FEYMEHDITGLLSCPDI---KFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG-VLKLADFGLANFSNTGH 285 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~---~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~-~vkl~DFG~a~~~~~~~ 285 (478)
++++.+..+..+..... .++...+..++.|++.++.|+|+.+++||||||+||+++..+ .++++|||++.......
T Consensus 77 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 77 MEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred EecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 99999876665544443 789999999999999999999999999999999999999998 79999999997554332
Q ss_pred CC-----CccccccCCcccCcccccCC--CCCCChhhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHHcCCC-Cc
Q 011763 286 RQ-----PLTSRVVTLWYRPPELLLGA--TDYGPSVDLWSVGCVFAELLIGKPILQGRTE---VEQLHKIFKLCGSP-PD 354 (478)
Q Consensus 286 ~~-----~~~~~~~t~~y~APE~l~~~--~~~~~~~DiwslG~il~elltG~~pf~~~~~---~~~~~~i~~~~g~~-~~ 354 (478)
.. ......+|..|+|||.+.+. ..+....|+|++|++++++++|..||..... .......+.....+ ..
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLA 236 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccc
Confidence 21 24567889999999998763 4788899999999999999999999887764 33333333332222 00
Q ss_pred hhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 355 DYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
.. ...... ......+.+++..++..+|..|.+..+...++|...
T Consensus 237 ~~-----------------~~~~~~---~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 280 (384)
T COG0515 237 SP-----------------LSPSNP---ELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAH 280 (384)
T ss_pred cc-----------------cCcccc---chhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhC
Confidence 00 000000 122357899999999999999999999999977654
No 408
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.94 E-value=7.3e-28 Score=243.64 Aligned_cols=242 Identities=27% Similarity=0.454 Sum_probs=200.6
Q ss_pred eeecCceEEEEEEE---CCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcC-CCCeeeecceeeecCCceEEEEEeec
Q 011763 138 IGQGTYSSVFRARD---LDTGKIVALKKVRFDNFEPESVRFMAREILILRRLD-HPNIIKLEGLITSRLSCSIYLVFEYM 213 (478)
Q Consensus 138 LG~G~~g~V~~~~~---~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~lv~e~~ 213 (478)
+|.|.||.|++++. .+.+..+|+|++++.............|..++..++ ||++|+++..|+. ....+++++|.
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt--~~kl~l~ld~~ 79 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQT--DGKLYLILDFL 79 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecc--ccchhHhhhhc
Confidence 68999999999853 356788999998765543222224456888999886 9999999888877 56789999999
Q ss_pred cCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccc
Q 011763 214 EHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRV 293 (478)
Q Consensus 214 ~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 293 (478)
.++.+.........+.+...+.+...++.+++++|+.+|+|||+|++||+++.+|++++.|||+++..-.... .+
T Consensus 80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~-----~c 154 (612)
T KOG0603|consen 80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI-----AC 154 (612)
T ss_pred ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhh-----cc
Confidence 9987777777777889999999999999999999999999999999999999999999999999986654322 28
Q ss_pred cCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCC
Q 011763 294 VTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQP 373 (478)
Q Consensus 294 ~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 373 (478)
||..|||||++.+ ...++|+||||+++|+|++|..||.+ +...+|....-..|
T Consensus 155 gt~eymApEI~~g---h~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p-------------------- 207 (612)
T KOG0603|consen 155 GTYEYRAPEIING---HLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMP-------------------- 207 (612)
T ss_pred cchhhhhhHhhhc---cCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCc--------------------
Confidence 8999999999873 57799999999999999999999998 66777765332222
Q ss_pred CCccchhcccCCchhHHHHHHHhcCCCCCCccC-----HHHHHhCcccCCCCCC
Q 011763 374 YDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT-----ASAALASEYFSTKPYA 422 (478)
Q Consensus 374 ~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t-----a~e~L~hp~f~~~~~~ 422 (478)
..++..+.+++..|+..+|.+|.- +.++++|+||..+.|.
T Consensus 208 ---------~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~ 252 (612)
T KOG0603|consen 208 ---------RELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWN 252 (612)
T ss_pred ---------hhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHh
Confidence 245678899999999999999975 4799999999876654
No 409
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.94 E-value=8e-26 Score=224.97 Aligned_cols=164 Identities=21% Similarity=0.234 Sum_probs=128.2
Q ss_pred ccceeeeeeeeecCceEEEEEEECC-CCcEEEEEEeecCCC---ChHHHHHHHHHHHHHHhcCCCCeee-ecceeeecCC
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLD-TGKIVALKKVRFDNF---EPESVRFMAREILILRRLDHPNIIK-LEGLITSRLS 203 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~-~~~~vAlK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~-l~~~~~~~~~ 203 (478)
.++|.+.+.||+|+||+||+|++.. +++.||||++..... .......+.+|+++|+.|+|+||++ +++.
T Consensus 17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~------ 90 (365)
T PRK09188 17 SARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT------ 90 (365)
T ss_pred cCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc------
Confidence 6689999999999999999998876 678889998753311 2334566889999999999999985 4321
Q ss_pred ceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccC-CCCcEEEecCCcEEEeecccccccC
Q 011763 204 CSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDI-KGSNLLVNNEGVLKLADFGLANFSN 282 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDl-kp~NILl~~~~~vkl~DFG~a~~~~ 282 (478)
...||||||+++..+.... . .. ...++.|++.+|.|||++||+|||| ||+|||++.++.+||+|||+|+...
T Consensus 91 ~~~~LVmE~~~G~~L~~~~-~---~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~ 163 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLAR-P---HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFR 163 (365)
T ss_pred CCcEEEEEccCCCCHHHhC-c---cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecc
Confidence 3479999999987765332 1 11 1467899999999999999999999 9999999999999999999998654
Q ss_pred CCCC-------CCccccccCCcccCccccc
Q 011763 283 TGHR-------QPLTSRVVTLWYRPPELLL 305 (478)
Q Consensus 283 ~~~~-------~~~~~~~~t~~y~APE~l~ 305 (478)
.... .......+++.|+|||.+.
T Consensus 164 ~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~ 193 (365)
T PRK09188 164 RRGALYRIAAYEDLRHLLKHKRTYAPDALT 193 (365)
T ss_pred cCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence 3211 1123456688899999875
No 410
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.92 E-value=1.3e-25 Score=237.66 Aligned_cols=226 Identities=29% Similarity=0.436 Sum_probs=172.5
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
.++|..++.|-.|+||.||+++++.+.+.+|+| ++++++ +.+- ||.....|++|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l-------ilRn--ilt~a~npfvv---------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL-------ILRN--ILTFAGNPFVV---------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhc-ccccch-------hhhc--cccccCCccee----------------
Confidence 458999999999999999999999999999994 443321 1110 22222333333
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC---
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH--- 285 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~--- 285 (478)
++....+ ..-++++.. ++.+++|||+.||+|||+||+|+||+.-|++|+.|||+++......
T Consensus 136 ------gDc~tll-k~~g~lPvd--------mvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 136 ------GDCATLL-KNIGPLPVD--------MVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred ------chhhhhc-ccCCCCcch--------hhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 2222222 222244433 2779999999999999999999999999999999999986432110
Q ss_pred -----------CCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCc
Q 011763 286 -----------RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPD 354 (478)
Q Consensus 286 -----------~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~ 354 (478)
.......++|+.|+|||++.. ..|+..+|||++|+|+||.+-|..||.+++..+.+.+.+......|+
T Consensus 201 l~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr-qgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE 279 (1205)
T KOG0606|consen 201 LKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR-QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE 279 (1205)
T ss_pred hhhcchHHHHHHhhhccccCCccccChhhhhh-hccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccc
Confidence 011234688999999999987 77999999999999999999999999999999999888876554443
Q ss_pred hhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCcc---CHHHHHhCcccCCCCCC
Q 011763 355 DYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRA---TASAALASEYFSTKPYA 422 (478)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~---ta~e~L~hp~f~~~~~~ 422 (478)
.. ..++++++++|.++|..+|..|. .+.++-+|+||+...|.
T Consensus 280 ~d--------------------------ea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~ 324 (1205)
T KOG0606|consen 280 ED--------------------------EALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWK 324 (1205)
T ss_pred cC--------------------------cCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccc
Confidence 32 36789999999999999999995 57788899999876654
No 411
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=4.4e-24 Score=212.17 Aligned_cols=255 Identities=24% Similarity=0.222 Sum_probs=190.2
Q ss_pred ceeeeeeeeecCceEEEEEEECCCC-cEEEEEEeecCCCChHHHHHHHHHHHHHHhcCC----CCeeeecceeeecCCce
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTG-KIVALKKVRFDNFEPESVRFMAREILILRRLDH----PNIIKLEGLITSRLSCS 205 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~-~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h----~nIv~l~~~~~~~~~~~ 205 (478)
+|.+.++||+|+||.||++.+..++ ..+|+|+......... ..+..|+.+|..+.. +++..+++... ....+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~--~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~-~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP--SVLKIEIQVLKKLEKKNGPSHFPKLLDHGR-STEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC--ccchhHHHHHHHHhhhcCCCCCCEEEEecc-CCCce
Confidence 7999999999999999999987764 6789998765432211 146678888888862 58888877764 22667
Q ss_pred EEEEEeeccCCchhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecC-----CcEEEeeccccc
Q 011763 206 IYLVFEYMEHDITGLLSCP-DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE-----GVLKLADFGLAN 279 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~-----~~vkl~DFG~a~ 279 (478)
-||||+.++.+|.++.... ...|+...+..++.|++.+|.+||+.|++||||||+|+++... ..+.|.|||+++
T Consensus 96 ~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar 175 (322)
T KOG1164|consen 96 NFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR 175 (322)
T ss_pred eEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence 8999999998888776443 4789999999999999999999999999999999999999865 469999999998
Q ss_pred ccC--CCC----CCC---ccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcC
Q 011763 280 FSN--TGH----RQP---LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCG 350 (478)
Q Consensus 280 ~~~--~~~----~~~---~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g 350 (478)
... ... ... .....||..|+++.+..+ ...+.+.|+||++.++.+|+.|..|+..........++.....
T Consensus 176 ~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~-~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~ 254 (322)
T KOG1164|consen 176 RFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLG-IEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR 254 (322)
T ss_pred cccccCCCCcccccCCCCccCCCCccccccHHHhCC-CccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence 221 111 111 223458999999998887 6779999999999999999999999977654333333322110
Q ss_pred CCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 351 SPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
... ........+..+..++..+-..+...+|....+...
T Consensus 255 ~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~ 293 (322)
T KOG1164|consen 255 KLL------------------------TDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL 293 (322)
T ss_pred hhc------------------------cccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence 000 000122355677777777777888889988776544
No 412
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=2.4e-24 Score=202.12 Aligned_cols=209 Identities=24% Similarity=0.298 Sum_probs=173.6
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCCceEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSRLSCSIYLV 209 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~lv 209 (478)
.|.+.++||+|+||.+++|.+.-+++.||||.-... ....++..|....+.| ..+.|..++.+-. .+.+-.||
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk----S~APQLrdEYr~YKlL~g~~GIP~vYYFGq--eG~~NiLV 102 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK----SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQ--EGKYNILV 102 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEecccc----CCcchHHHHHHHHHHHcCCCCCCceeeecc--ccchhhhh
Confidence 799999999999999999999999999999975433 2234567789888888 5789988854333 36777899
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCC-----cEEEeecccccccCCC
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG-----VLKLADFGLANFSNTG 284 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~-----~vkl~DFG~a~~~~~~ 284 (478)
+|+++.+|.+++.-.+..|+...+.-++.||+.-++|+|++.+|+|||||+|+||...+ .|-|+|||+|+.+...
T Consensus 103 idLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp 182 (449)
T KOG1165|consen 103 IDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP 182 (449)
T ss_pred hhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence 99999998888888888999999999999999999999999999999999999997554 5899999999877544
Q ss_pred CCC------CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC---ChHHHHHHHH
Q 011763 285 HRQ------PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGR---TEVEQLHKIF 346 (478)
Q Consensus 285 ~~~------~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~---~~~~~~~~i~ 346 (478)
... ...+..||..||+--..++ ..-+...|+=+||-+++.+|-|..||++. +..+..++|-
T Consensus 183 ~TkqHIPYrE~KSLsGTARYMSINTHlG-rEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIG 252 (449)
T KOG1165|consen 183 KTKQHIPYREHKSLSGTARYMSINTHLG-REQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIG 252 (449)
T ss_pred cccccCccccccccccceeeeEeecccc-chhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhc
Confidence 322 2244567999999887777 55688899999999999999999999874 5556666653
No 413
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=2.7e-24 Score=193.65 Aligned_cols=247 Identities=21% Similarity=0.248 Sum_probs=191.4
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCC-CCeeeecceeeecCCceEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDH-PNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~~~~~~~~~~ 207 (478)
...|.++++||.|+||.+|++....+|..||||+-..... ...+.-|..+.+.|++ ..|..+..+..+ ..+-.
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~----hpqL~yEskvY~iL~~g~GiP~i~~y~~e--~~ynv 87 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK----HPQLLYESKVYRILQGGVGIPHIRHYGTE--KDYNV 87 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC----CcchhHHHHHHHHhccCCCCchhhhhccc--cccce
Confidence 5689999999999999999999999999999998654322 2346679999998854 677777777766 67788
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecC---CcEEEeecccccccCCC
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE---GVLKLADFGLANFSNTG 284 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~---~~vkl~DFG~a~~~~~~ 284 (478)
|||+++..++.+++.-....|+...+.-++-|++.-++|+|.+++|||||||+|+|..-+ ..+.|+|||+|+.+.+.
T Consensus 88 lVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~ 167 (341)
T KOG1163|consen 88 LVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDI 167 (341)
T ss_pred eeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccc
Confidence 999999998888887777789999999999999999999999999999999999998644 57899999999866432
Q ss_pred CCC------CccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHHcCCCCch
Q 011763 285 HRQ------PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEV---EQLHKIFKLCGSPPDD 355 (478)
Q Consensus 285 ~~~------~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~---~~~~~i~~~~g~~~~~ 355 (478)
... .-....||..|.+--...+ ..-+...|+-|+|.+|..+.-|..||++.... +..++|.+.-
T Consensus 168 ~t~~HIpyre~r~ltGTaRYASinAh~g-~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK------ 240 (341)
T KOG1163|consen 168 RTRQHIPYREDRNLTGTARYASINAHLG-IEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKK------ 240 (341)
T ss_pred cccccCccccCCccceeeeehhhhhhhh-hhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhh------
Confidence 211 1234567888988766655 34467889999999999999999999986543 4445554432
Q ss_pred hhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccC
Q 011763 356 YWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT 406 (478)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~t 406 (478)
....++..++.+|.++.-.|.-|=..-=++-|.
T Consensus 241 ------------------~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pd 273 (341)
T KOG1163|consen 241 ------------------MSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPD 273 (341)
T ss_pred ------------------cCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCc
Confidence 222345566788888888888775444444454
No 414
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.91 E-value=1.1e-24 Score=230.59 Aligned_cols=248 Identities=26% Similarity=0.388 Sum_probs=181.6
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCC--CChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDN--FEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
+|...+.||.+.|=+|.+|++.+ |. |+||++-+.. ..-...++...|++ ...++|||.+++.-+... ....||
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t--~kAAyl 98 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVT--DKAAYL 98 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHh--hHHHHH
Confidence 68889999999999999998753 44 8999986543 33444455555666 566699999998776544 456789
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeeccccccc--CCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFS--NTGHR 286 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~--~~~~~ 286 (478)
|-+|+.++|.+.+. .+..+...+.+.|+.||+.||..+|..||+|+|||.+||||+.-+-+.|+||..-+.. .+++.
T Consensus 99 vRqyvkhnLyDRlS-TRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNP 177 (1431)
T KOG1240|consen 99 VRQYVKHNLYDRLS-TRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNP 177 (1431)
T ss_pred HHHHHhhhhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCc
Confidence 99999988877664 4446788899999999999999999999999999999999999999999999887543 22222
Q ss_pred CCcccccc----CCcccCcccccCC---------CC-CCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCC
Q 011763 287 QPLTSRVV----TLWYRPPELLLGA---------TD-YGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGS 351 (478)
Q Consensus 287 ~~~~~~~~----t~~y~APE~l~~~---------~~-~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~ 351 (478)
...+-+.. -.+|+|||.+... .. .+++.||||+||+++||++ |+|||.- .++-.....- .
T Consensus 178 adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L----SQL~aYr~~~-~ 252 (1431)
T KOG1240|consen 178 ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL----SQLLAYRSGN-A 252 (1431)
T ss_pred ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH----HHHHhHhccC-c
Confidence 22222222 3469999988541 12 6789999999999999998 7999961 1111111100 0
Q ss_pred CCchhhccCCCCCccccCCCCCCCccchhcccC-CchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 352 PPDDYWKKSKLPHATLFKPQQPYDSSLRETFKD-LPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
. ..+..+.. -+..+++||..|++.||.+|.+|++.|+-
T Consensus 253 ~------------------------~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 253 D------------------------DPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred c------------------------CHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 0 00001111 13368999999999999999999999976
No 415
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.90 E-value=1.4e-23 Score=192.03 Aligned_cols=142 Identities=20% Similarity=0.226 Sum_probs=109.4
Q ss_pred eeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHH------------------------HHHHHHHHHHHHhcCCCC
Q 011763 135 LEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPES------------------------VRFMAREILILRRLDHPN 190 (478)
Q Consensus 135 ~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~------------------------~~~~~~E~~~l~~l~h~n 190 (478)
...||+|+||.||+|.+. +|+.||||+++........ ......|+.+|.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 467999999999999986 8999999999765321111 122345999999998877
Q ss_pred eeeecceeeecCCceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCceeccCCCCcEEEecCCc
Q 011763 191 IIKLEGLITSRLSCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHC-HSRGVLHRDIKGSNLLVNNEGV 269 (478)
Q Consensus 191 Iv~l~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~L-H~~givHrDlkp~NILl~~~~~ 269 (478)
+.....+. . .. .+|||||++++.+.........+++..+..++.||+.+|.+| |+.||+||||||+|||++ ++.
T Consensus 81 v~~p~~~~-~--~~-~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 81 IPCPEPIL-L--KS-HVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCCcEEE-e--cC-CEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCc
Confidence 64332222 1 12 379999999865543322345789999999999999999999 699999999999999998 578
Q ss_pred EEEeecccccccC
Q 011763 270 LKLADFGLANFSN 282 (478)
Q Consensus 270 vkl~DFG~a~~~~ 282 (478)
++|+|||+|....
T Consensus 156 v~LiDFG~a~~~~ 168 (190)
T cd05147 156 LYIIDVSQSVEHD 168 (190)
T ss_pred EEEEEccccccCC
Confidence 9999999996543
No 416
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.90 E-value=8.8e-24 Score=201.97 Aligned_cols=237 Identities=22% Similarity=0.314 Sum_probs=151.2
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCC----------CCeeeecceee
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDH----------PNIIKLEGLIT 199 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h----------~nIv~l~~~~~ 199 (478)
.+...+.||.|+++.||.+++..+++.+|||++..... .....+.+.+|......+.+ -.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 57788999999999999999999999999999876553 23346666666655544322 12222222221
Q ss_pred ---------ecCC-c-----eEEEEEeeccCCchhhcc---C-CC--CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCC
Q 011763 200 ---------SRLS-C-----SIYLVFEYMEHDITGLLS---C-PD--IKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIK 258 (478)
Q Consensus 200 ---------~~~~-~-----~~~lv~e~~~~~ll~~~~---~-~~--~~l~~~~~~~i~~qil~aL~~LH~~givHrDlk 258 (478)
...+ . ..+++|+-+.+++...+. . .. ..+.......+..|+++.+++||..||+|+||+
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~ 172 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK 172 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence 1100 1 236788888776654432 1 11 122333345566899999999999999999999
Q ss_pred CCcEEEecCCcEEEeecccccccCCCCCCCccccccCCcccCcccccCC-------CCCCChhhHHHHHHHHHHHHhCCC
Q 011763 259 GSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGA-------TDYGPSVDLWSVGCVFAELLIGKP 331 (478)
Q Consensus 259 p~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~t~~y~APE~l~~~-------~~~~~~~DiwslG~il~elltG~~ 331 (478)
|+|++++.+|.++|+||+.....+... .....+..|.+||..... ..++.+.|.|+||+++|.|+++..
T Consensus 173 ~~nfll~~~G~v~Lg~F~~~~r~g~~~----~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~l 248 (288)
T PF14531_consen 173 PENFLLDQDGGVFLGDFSSLVRAGTRY----RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRL 248 (288)
T ss_dssp GGGEEE-TTS-EEE--GGGEEETTEEE----EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-
T ss_pred eeeEEEcCCCCEEEcChHHHeecCcee----eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccC
Confidence 999999999999999999876554311 112335779999976321 247889999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCc
Q 011763 332 ILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKR 404 (478)
Q Consensus 332 pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R 404 (478)
||......... + ..+ ..+.++|+.+++||..||+.||.+|
T Consensus 249 Pf~~~~~~~~~-----------~---------------------~~f-~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 249 PFGLSSPEADP-----------E---------------------WDF-SRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp STCCCGGGSTS-----------G---------------------GGG-TTSS---HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCCccccc-----------c---------------------ccc-hhcCCcCHHHHHHHHHHccCCcccC
Confidence 99854321100 0 011 2234789999999999999999988
No 417
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.89 E-value=3.8e-23 Score=192.00 Aligned_cols=174 Identities=14% Similarity=0.162 Sum_probs=132.0
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChH-HHHH------HHHHHHHHHhcCCCCeeeecceeeec
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPE-SVRF------MAREILILRRLDHPNIIKLEGLITSR 201 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~-~~~~------~~~E~~~l~~l~h~nIv~l~~~~~~~ 201 (478)
..+|.+++.||.|+||.||++.+ ++..+|||+++......+ .... +.+|+..+.++.|++|..+.+++...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 45899999999999999999765 466899999975543222 2222 56899999999999999998886643
Q ss_pred C------CceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeec
Q 011763 202 L------SCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADF 275 (478)
Q Consensus 202 ~------~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DF 275 (478)
. ....+|||||++|..+..+. .+++ ....+|+.+|..||+.|++|+||||+||+++++| ++|+||
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDf 178 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMP----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDL 178 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhh----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEEC
Confidence 2 23578999999996665542 2333 2456999999999999999999999999999988 999999
Q ss_pred ccccccCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHH
Q 011763 276 GLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELL 327 (478)
Q Consensus 276 G~a~~~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~ell 327 (478)
|........... . .+++. ..|+.++|+|+||+++..+.
T Consensus 179 g~~~~~~e~~a~--d-----------~~vle-r~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 179 SGKRCTAQRKAK--D-----------RIDLE-RHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCcccccchhhH--H-----------HHHHH-hHhcccccccceeEeehHHH
Confidence 988654321110 0 02222 45778999999999988765
No 418
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.88 E-value=2.1e-22 Score=184.75 Aligned_cols=143 Identities=20% Similarity=0.250 Sum_probs=111.3
Q ss_pred eeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCCh------------------------HHHHHHHHHHHHHHhcCCC
Q 011763 134 KLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEP------------------------ESVRFMAREILILRRLDHP 189 (478)
Q Consensus 134 ~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~------------------------~~~~~~~~E~~~l~~l~h~ 189 (478)
+...||+|+||.||+|.+. +|+.||||+++...... .....+.+|+..+.++.|+
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999999999999987 89999999998653110 0022345799999999998
Q ss_pred CeeeecceeeecCCceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCcEEEecCC
Q 011763 190 NIIKLEGLITSRLSCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEG 268 (478)
Q Consensus 190 nIv~l~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~ 268 (478)
+|.....+... ..||||||+++..+.........++...+..++.|++.+|.+||+ +||+||||||+|||++ ++
T Consensus 80 ~i~~p~~~~~~----~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~ 154 (190)
T cd05145 80 GVPVPEPILLK----KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DG 154 (190)
T ss_pred CCCCceEEEec----CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CC
Confidence 87544333322 248999999986332221233467889999999999999999999 9999999999999999 89
Q ss_pred cEEEeecccccccC
Q 011763 269 VLKLADFGLANFSN 282 (478)
Q Consensus 269 ~vkl~DFG~a~~~~ 282 (478)
.++|+|||++....
T Consensus 155 ~~~liDFG~a~~~~ 168 (190)
T cd05145 155 KPYIIDVSQAVELD 168 (190)
T ss_pred CEEEEEcccceecC
Confidence 99999999997554
No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=2.9e-22 Score=182.36 Aligned_cols=192 Identities=19% Similarity=0.156 Sum_probs=140.5
Q ss_pred eeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC--ChHHHHHHHHHHHHHHhcC-CCCeeeecceeeecCCceEEE
Q 011763 132 FEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF--EPESVRFMAREILILRRLD-HPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 132 y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~--~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~l 208 (478)
+.+...|+.|+||+|+++.. .+..++.+.+..... ..-....+.+|+++|++|. |++|++++++ ...|+
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~------~~~~l 75 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW------DGRHL 75 (218)
T ss_pred cccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE------cCEEE
Confidence 45678899999999998864 677888887765443 1122235678999999994 5889999775 23689
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccC-CCCcEEEecCCcEEEeecccccccCCCCCC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDI-KGSNLLVNNEGVLKLADFGLANFSNTGHRQ 287 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDl-kp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 287 (478)
+|||+.|..+..... .. ...++.|++.+|.+||++||+|||| ||+|||++.++.++|+|||+|.........
T Consensus 76 vmeyI~G~~L~~~~~------~~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~ 148 (218)
T PRK12274 76 DRSYLAGAAMYQRPP------RG-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARW 148 (218)
T ss_pred EEeeecCccHHhhhh------hh-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchH
Confidence 999999876653321 11 2357889999999999999999999 799999999999999999999755432210
Q ss_pred ----C---c-----cccccCCcccCcccccCCCCCC-ChhhHHHHHHHHHHHHhCCCCCCCCCh
Q 011763 288 ----P---L-----TSRVVTLWYRPPELLLGATDYG-PSVDLWSVGCVFAELLIGKPILQGRTE 338 (478)
Q Consensus 288 ----~---~-----~~~~~t~~y~APE~l~~~~~~~-~~~DiwslG~il~elltG~~pf~~~~~ 338 (478)
. . .-...++.|+.|+.-.--...+ ...++++.|+.+|.++|+..++.++++
T Consensus 149 ~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~ 212 (218)
T PRK12274 149 MRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE 212 (218)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence 0 0 0012377788887543211222 467999999999999999988876553
No 420
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.86 E-value=8.3e-22 Score=189.04 Aligned_cols=208 Identities=23% Similarity=0.338 Sum_probs=143.0
Q ss_pred CCCCeeeecceeeecC-------------------------CceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHH
Q 011763 187 DHPNIIKLEGLITSRL-------------------------SCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLL 241 (478)
Q Consensus 187 ~h~nIv~l~~~~~~~~-------------------------~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil 241 (478)
.|||||++..+|.+.- +..+|+||......+...+..+ ..+.....-++.|++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~--~~s~r~~~~~laQlL 351 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTR--HRSYRTGRVILAQLL 351 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcC--CCchHHHHHHHHHHH
Confidence 5999999988875421 2367999998888777666544 356677778899999
Q ss_pred HHHHHHHhCCceeccCCCCcEEEe--cCC--cEEEeecccccccCCC-----CCCCccccccCCcccCcccccCCCC---
Q 011763 242 HGLEHCHSRGVLHRDIKGSNLLVN--NEG--VLKLADFGLANFSNTG-----HRQPLTSRVVTLWYRPPELLLGATD--- 309 (478)
Q Consensus 242 ~aL~~LH~~givHrDlkp~NILl~--~~~--~vkl~DFG~a~~~~~~-----~~~~~~~~~~t~~y~APE~l~~~~~--- 309 (478)
+|+.|||++||.|||||.+||||. +|+ .+.|+|||.+...... ........-|.-..||||+...-..
T Consensus 352 Eav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~a 431 (598)
T KOG4158|consen 352 EAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNA 431 (598)
T ss_pred HHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCce
Confidence 999999999999999999999985 333 4789999988533221 1111122334667899998753111
Q ss_pred --CCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCch
Q 011763 310 --YGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPT 387 (478)
Q Consensus 310 --~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 387 (478)
.-.++|.|+.|.+.||+++...||.+..+.-.-..-++ +. .|......+++
T Consensus 432 vvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yq-----------e~----------------qLPalp~~vpp 484 (598)
T KOG4158|consen 432 VVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQ-----------ES----------------QLPALPSRVPP 484 (598)
T ss_pred eeccchhhhhhhhhhHHHHhccCCcccccchheechhhhh-----------hh----------------hCCCCcccCCh
Confidence 12378999999999999999999987433211111010 00 01111246788
Q ss_pred hHHHHHHHhcCCCCCCccCH---HHHHh------CcccCCCCCCC
Q 011763 388 TAVNLIETLLSVEPYKRATA---SAALA------SEYFSTKPYAC 423 (478)
Q Consensus 388 ~l~~Li~~mL~~dP~~R~ta---~e~L~------hp~f~~~~~~~ 423 (478)
.+++|+..+|+.||.+|+++ .-+|+ |.|++.....|
T Consensus 485 ~~rqlV~~lL~r~pskRvsp~iAANvl~LsLw~~~~~vka~~~~~ 529 (598)
T KOG4158|consen 485 VARQLVFDLLKRDPSKRVSPNIAANVLNLSLWRMGEDVKAMMEKC 529 (598)
T ss_pred HHHHHHHHHhcCCccccCCccHHHhHHHHHHhcCchHHHHhcccc
Confidence 99999999999999999985 44553 45555444444
No 421
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.85 E-value=8.9e-22 Score=180.21 Aligned_cols=255 Identities=15% Similarity=0.207 Sum_probs=192.4
Q ss_pred cccccCcccccccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecce
Q 011763 118 GEAIQGWVPLRADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGL 197 (478)
Q Consensus 118 ~~~~~~~~~~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~ 197 (478)
......+..+......++.+|.+...|..|++++.. ..++.|++.....+....+.|.+|.-.|+-+.||||+.+++.
T Consensus 178 datlsr~~gid~~~lnl~tkl~e~hsgelwrgrwqg--ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlga 255 (448)
T KOG0195|consen 178 DATLSRYTGIDVSSLNLITKLAESHSGELWRGRWQG--NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGA 255 (448)
T ss_pred ccccccccCcchhhhhhhhhhccCCCcccccccccC--cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhh
Confidence 334445555556677788899999999999999854 456778887766666666778889999999999999999999
Q ss_pred eeecCCceEEEEEeeccCCchhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCC--ceeccCCCCcEEEecCCcEEEe
Q 011763 198 ITSRLSCSIYLVFEYMEHDITGLLSCP--DIKFSEAQIKCYMNQLLHGLEHCHSRG--VLHRDIKGSNLLVNNEGVLKLA 273 (478)
Q Consensus 198 ~~~~~~~~~~lv~e~~~~~ll~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~g--ivHrDlkp~NILl~~~~~vkl~ 273 (478)
|.. ..++.+|..||+.+.+..++.. ....+..++..++.+|+.|++|||+.. |..--|....|+||++.+.+|.
T Consensus 256 cns--ppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris 333 (448)
T KOG0195|consen 256 CNS--PPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS 333 (448)
T ss_pred ccC--CCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee
Confidence 987 4668899999998766655433 334677889999999999999999884 4445788899999999877664
Q ss_pred --ecccccccCCCCCCCccccccCCcccCcccccCCCC--CCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHc
Q 011763 274 --DFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATD--YGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLC 349 (478)
Q Consensus 274 --DFG~a~~~~~~~~~~~~~~~~t~~y~APE~l~~~~~--~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~ 349 (478)
|--++... ..+...|.||+||.+..... .-.++|+|||+++||||.|...||..-...+.-.+|.- -
T Consensus 334 mad~kfsfqe--------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkial-e 404 (448)
T KOG0195|consen 334 MADTKFSFQE--------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIAL-E 404 (448)
T ss_pred cccceeeeec--------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhh-c
Confidence 33332111 22344788999999875221 23478999999999999999999998887776555421 0
Q ss_pred CCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHH
Q 011763 350 GSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAAL 411 (478)
Q Consensus 350 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L 411 (478)
|- -....+.++..+..|+.-|++.||.+||..+.++
T Consensus 405 gl--------------------------rv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 405 GL--------------------------RVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred cc--------------------------cccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 10 0111246788899999999999999999987664
No 422
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.84 E-value=2.8e-22 Score=199.64 Aligned_cols=154 Identities=29% Similarity=0.487 Sum_probs=114.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC-----CCCccccccCCcccCcc
Q 011763 228 FSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH-----RQPLTSRVVTLWYRPPE 302 (478)
Q Consensus 228 l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~-----~~~~~~~~~t~~y~APE 302 (478)
.+......++.|++.+++| ++.+|+|+||.||++..+..+||.|||+........ ....+..++|.+||+||
T Consensus 356 ~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPE 432 (516)
T KOG1033|consen 356 RSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPE 432 (516)
T ss_pred cchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHH
Confidence 4556678889999999999 999999999999999999999999999987654433 22345678899999999
Q ss_pred cccCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhc
Q 011763 303 LLLGATDYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRET 381 (478)
Q Consensus 303 ~l~~~~~~~~~~DiwslG~il~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 381 (478)
.|.+ ..|+.++|||+||+||+||+. =...|.. ...+..+ + -|..|+.+|
T Consensus 433 Qi~g-~~y~~kvdIyaLGlil~EL~~~f~T~~er---~~t~~d~-r-~g~ip~~~~------------------------ 482 (516)
T KOG1033|consen 433 QIRG-QQYSEKVDIYALGLILAELLIQFSTQFER---IATLTDI-R-DGIIPPEFL------------------------ 482 (516)
T ss_pred HHhh-hhhhhhcchhhHHHHHHHHHHHhccHHHH---HHhhhhh-h-cCCCChHHh------------------------
Confidence 9997 789999999999999999997 1222211 0111111 1 122222222
Q ss_pred ccCCchhHHHHHHHhcCCCCCCccCHHHHHhCccc
Q 011763 382 FKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 416 (478)
Q Consensus 382 ~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f 416 (478)
.-.+.-.+|+.+||...|.+||++.+.-.|+|.
T Consensus 483 --~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 483 --QDYPEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred --hcCcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 112344689999999999999988888777775
No 423
>smart00090 RIO RIO-like kinase.
Probab=99.83 E-value=3.1e-20 Score=175.82 Aligned_cols=146 Identities=21% Similarity=0.190 Sum_probs=112.5
Q ss_pred ceeeeeeeeecCceEEEEEE-ECCCCcEEEEEEeecCCCCh----------------------HHHHHHHHHHHHHHhcC
Q 011763 131 AFEKLEKIGQGTYSSVFRAR-DLDTGKIVALKKVRFDNFEP----------------------ESVRFMAREILILRRLD 187 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~-~~~~~~~vAlK~~~~~~~~~----------------------~~~~~~~~E~~~l~~l~ 187 (478)
-|.+.+.||+|+||.||+|. +..+|+.||||+++...... .....+.+|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 58899999999999999998 66789999999997543210 01123567999999997
Q ss_pred CCCeeeecceeeecCCceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ceeccCCCCcEEEec
Q 011763 188 HPNIIKLEGLITSRLSCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRG-VLHRDIKGSNLLVNN 266 (478)
Q Consensus 188 h~nIv~l~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g-ivHrDlkp~NILl~~ 266 (478)
+.. +.+..++.. . ..+|||||+++..+.........+....+..++.||+.+|.+||++| |+|+||||+||+++
T Consensus 109 ~~~-i~~p~~~~~--~-~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~- 183 (237)
T smart00090 109 EAG-VPVPKPIAW--R-RNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH- 183 (237)
T ss_pred hcC-CCCCeeeEe--c-CceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-
Confidence 532 222222322 1 24799999999665544333445677778899999999999999999 99999999999999
Q ss_pred CCcEEEeeccccccc
Q 011763 267 EGVLKLADFGLANFS 281 (478)
Q Consensus 267 ~~~vkl~DFG~a~~~ 281 (478)
++.++|+|||.+...
T Consensus 184 ~~~i~LiDFg~a~~~ 198 (237)
T smart00090 184 DGKVVIIDVSQSVEL 198 (237)
T ss_pred CCCEEEEEChhhhcc
Confidence 889999999998643
No 424
>PRK10345 hypothetical protein; Provisional
Probab=99.83 E-value=5.7e-20 Score=170.04 Aligned_cols=139 Identities=14% Similarity=0.185 Sum_probs=104.8
Q ss_pred eeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-----CCCCeeeecceeeecCC-ce
Q 011763 132 FEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-----DHPNIIKLEGLITSRLS-CS 205 (478)
Q Consensus 132 y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~nIv~l~~~~~~~~~-~~ 205 (478)
+.-.+.||+|+|+.||. +..++.. +||++..... ...+.+.+|+.+++.+ +||||+++++++....+ ..
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~--~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~ 78 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD--GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGY 78 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCe-EEEEEecccc--chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeE
Confidence 34457899999999996 6666665 6999876432 2346688999999999 57999999999987532 33
Q ss_pred EE-EEEeecc--CCchhhccCCCCCCCHHHHHHHHHHHHHHH-HHHHhCCceeccCCCCcEEEecC----CcEEEeeccc
Q 011763 206 IY-LVFEYME--HDITGLLSCPDIKFSEAQIKCYMNQLLHGL-EHCHSRGVLHRDIKGSNLLVNNE----GVLKLADFGL 277 (478)
Q Consensus 206 ~~-lv~e~~~--~~ll~~~~~~~~~l~~~~~~~i~~qil~aL-~~LH~~givHrDlkp~NILl~~~----~~vkl~DFG~ 277 (478)
++ +|+||.+ ++.+..+.... .+++. ..++.|++.++ +|||+++|+||||||+|||++.. ..++|+||+.
T Consensus 79 v~~~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 79 VYDVIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred EEEEEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 33 7899944 55555554433 46665 35678888887 99999999999999999999743 3799999543
Q ss_pred c
Q 011763 278 A 278 (478)
Q Consensus 278 a 278 (478)
+
T Consensus 156 ~ 156 (210)
T PRK10345 156 E 156 (210)
T ss_pred C
Confidence 3
No 425
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.82 E-value=4e-20 Score=199.91 Aligned_cols=195 Identities=26% Similarity=0.327 Sum_probs=152.0
Q ss_pred ccccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcC---CCCeeeecceeeecCC
Q 011763 127 LRADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLD---HPNIIKLEGLITSRLS 203 (478)
Q Consensus 127 ~~~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~ 203 (478)
+..+.|.|.+.||+|+||+||+|.+.. |+.||||+-+..+. ++... -.+++.+|+ -+.|+.+...+.. .
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~----WEfYI-~~q~~~RLk~~~~~~~~~~~~a~~~--~ 766 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNP----WEFYI-CLQVMERLKPQMLPSIMHISSAHVF--Q 766 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCc----eeeee-hHHHHHhhchhhhcchHHHHHHHcc--C
Confidence 456789999999999999999999766 99999998764431 11000 122333443 2344455444444 3
Q ss_pred ceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEec-------CCcEEEeecc
Q 011763 204 CSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNN-------EGVLKLADFG 276 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~-------~~~vkl~DFG 276 (478)
+..+||+||.+.+.+..+.+....+++..+..+..||+..|++||.++|||+||||+|+||.. .--++|+|||
T Consensus 767 ~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG 846 (974)
T KOG1166|consen 767 NASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFG 846 (974)
T ss_pred CcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecc
Confidence 446899999998777777778888999999999999999999999999999999999999953 2358999999
Q ss_pred cccccCCC-CCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCC
Q 011763 277 LANFSNTG-HRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGK 330 (478)
Q Consensus 277 ~a~~~~~~-~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~ 330 (478)
.+.....- .......++.|-.+-.+|+..| ++|++.+|.|.|+.+++.||+|+
T Consensus 847 ~siDm~lfp~~~~F~~~~~td~f~C~EM~~g-rpWtYq~DyfGlAa~~h~mLFG~ 900 (974)
T KOG1166|consen 847 RSIDMKLFPDGTKFKAVWHTDLFDCIEMREG-RPWTYQIDYFGLAATVHVMLFGK 900 (974)
T ss_pred cceeeeEcCCCcEEeeeeccccchhHHHhcC-CCCchhhhhHHHHHHHHHHHHHH
Confidence 99654322 1245566778999999998887 89999999999999999999996
No 426
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.79 E-value=8.5e-21 Score=200.97 Aligned_cols=263 Identities=29% Similarity=0.407 Sum_probs=206.7
Q ss_pred cceeeeeeeeecCceEEEEEEEC-CCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcC-CCCeeeecceeeecCCceEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDL-DTGKIVALKKVRFDNFEPESVRFMAREILILRRLD-HPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~-~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~ 207 (478)
..|.+.+.||+|+|+.|-+.... .....+|+|.+..........+.+..|..+-..+. |.|++.+++.... ....+
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~--~~~~~ 97 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSS--PRSYL 97 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCC--Ccccc
Confidence 36888999999999999998764 34456777777655434455556667888888886 9999999998876 66789
Q ss_pred EEEeeccCCchhhcc-CCCC-CCCHHHHHHHHHHHHHHHHHHH-hCCceeccCCCCcEEEecCC-cEEEeecccccccCC
Q 011763 208 LVFEYMEHDITGLLS-CPDI-KFSEAQIKCYMNQLLHGLEHCH-SRGVLHRDIKGSNLLVNNEG-VLKLADFGLANFSNT 283 (478)
Q Consensus 208 lv~e~~~~~ll~~~~-~~~~-~l~~~~~~~i~~qil~aL~~LH-~~givHrDlkp~NILl~~~~-~vkl~DFG~a~~~~~ 283 (478)
++++|..++.+.... ..+. ..+...+..++.|+..++.|+| ..++.|+||||+|.+++..+ .+++.|||+|..+..
T Consensus 98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 999998887666555 4444 6788889999999999999999 99999999999999999999 999999999987654
Q ss_pred --CCCCCcccccc-CCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccC
Q 011763 284 --GHRQPLTSRVV-TLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKS 360 (478)
Q Consensus 284 --~~~~~~~~~~~-t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 360 (478)
+........++ ++.|+|||.+.+.....+..|+||.|+++.-+++|..|+......+.. ...|...
T Consensus 178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~-----------~~~~~~~ 246 (601)
T KOG0590|consen 178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR-----------YSSWKSN 246 (601)
T ss_pred cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccc-----------ceeeccc
Confidence 33444556678 999999999887556788999999999999999999887654433210 0001000
Q ss_pred CCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 361 KLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 361 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
+ .......|..++....+++.++|..+|..|.+.+++-.++|+..
T Consensus 247 ~-------------~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 247 K-------------GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred c-------------cccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 0 00112234678889999999999999999999999999999987
No 427
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=1.7e-18 Score=161.40 Aligned_cols=139 Identities=21% Similarity=0.266 Sum_probs=109.5
Q ss_pred eeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChH------HHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEE
Q 011763 135 LEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPE------SVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 135 ~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~l 208 (478)
++.||+|++|.||+|.+ .+..|++|+......... ....+.+|+.++..+.|++|+....++.. ....++
T Consensus 1 ~~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--~~~~~l 76 (211)
T PRK14879 1 MKLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVD--PENFII 76 (211)
T ss_pred CcccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEe--CCCCEE
Confidence 35789999999999986 677899998764332211 12456789999999999988766556554 345789
Q ss_pred EEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccC
Q 011763 209 VFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSN 282 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~ 282 (478)
||||++|..+..+..... . ....++.+|+.+|.+||+.+++|+|++|.|||++ ++.++|+|||.+....
T Consensus 77 v~e~~~G~~L~~~~~~~~---~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~~ 145 (211)
T PRK14879 77 VMEYIEGEPLKDLINSNG---M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEFSK 145 (211)
T ss_pred EEEEeCCcCHHHHHHhcc---H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccCCC
Confidence 999999866655543321 2 7788999999999999999999999999999999 7899999999987543
No 428
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.77 E-value=2.1e-18 Score=159.24 Aligned_cols=139 Identities=21% Similarity=0.213 Sum_probs=107.4
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCCh--------------------HHHHHHHHHHHHHHhcCCCC
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEP--------------------ESVRFMAREILILRRLDHPN 190 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~--------------------~~~~~~~~E~~~l~~l~h~n 190 (478)
.|.+.+.||.|+||.||++... +++.||||+++...... ........|+.++..+.|++
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 4888899999999999999864 79999999987543110 01123567899999998774
Q ss_pred --eeeecceeeecCCceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCC
Q 011763 191 --IIKLEGLITSRLSCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG 268 (478)
Q Consensus 191 --Iv~l~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~ 268 (478)
++.+++ .+..++||||+++..+..+... .....++.+|+.++.++|+.||+|+||||+||+|++++
T Consensus 95 i~v~~~~~------~~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~ 162 (198)
T cd05144 95 FPVPKPID------WNRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDE 162 (198)
T ss_pred CCCCceee------cCCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCC
Confidence 333332 2345899999998766544321 34567889999999999999999999999999999999
Q ss_pred cEEEeecccccccC
Q 011763 269 VLKLADFGLANFSN 282 (478)
Q Consensus 269 ~vkl~DFG~a~~~~ 282 (478)
.++|+|||++....
T Consensus 163 ~~~liDfg~~~~~~ 176 (198)
T cd05144 163 KIYIIDWPQMVSTD 176 (198)
T ss_pred cEEEEECCccccCC
Confidence 99999999986444
No 429
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.75 E-value=9.1e-18 Score=155.00 Aligned_cols=133 Identities=19% Similarity=0.227 Sum_probs=101.5
Q ss_pred eeeecCceEEEEEEECCCCcEEEEEEeecCCCCh------HHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEE
Q 011763 137 KIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEP------ESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVF 210 (478)
Q Consensus 137 ~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~ 210 (478)
.||+|+||.||++.. ++..|++|+........ .....+.+|++++..+.|+++....-++.. ....+|||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--~~~~~lv~ 76 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVD--PDNKTIVM 76 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE--CCCCEEEE
Confidence 379999999999984 56789999865433211 123556789999999988765443333333 34468999
Q ss_pred eeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeeccccccc
Q 011763 211 EYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFS 281 (478)
Q Consensus 211 e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~ 281 (478)
||++|..+..+...... .++.||+.+|.+||+.|++|+|++|.||+++ ++.++|+|||++...
T Consensus 77 e~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 77 EYIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred EEECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 99998766554332211 7889999999999999999999999999999 899999999998654
No 430
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.73 E-value=8.9e-18 Score=170.62 Aligned_cols=205 Identities=29% Similarity=0.424 Sum_probs=150.8
Q ss_pred HHhcCCCCeeeecceeeecCCceEEEEEeeccCCch-hhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCc-eeccCCCC
Q 011763 183 LRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHDIT-GLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGV-LHRDIKGS 260 (478)
Q Consensus 183 l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~~~ll-~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gi-vHrDlkp~ 260 (478)
|+.+.|.|+.++++.+.+ +...++|.+||..+.+ +.+......+++.....++++|+.||.|||.-.| .|+.|+..
T Consensus 1 l~~l~h~n~~~f~g~~~~--~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~ 78 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVD--GPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSS 78 (484)
T ss_pred CcccchhhhhhheeeEec--CCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccc
Confidence 356789999999999988 4778999999986554 4445557788999999999999999999998865 99999999
Q ss_pred cEEEecCCcEEEeecccccccCCC-CCCCccccccCCcccCcccccCCC------CCCChhhHHHHHHHHHHHHhCCCCC
Q 011763 261 NLLVNNEGVLKLADFGLANFSNTG-HRQPLTSRVVTLWYRPPELLLGAT------DYGPSVDLWSVGCVFAELLIGKPIL 333 (478)
Q Consensus 261 NILl~~~~~vkl~DFG~a~~~~~~-~~~~~~~~~~t~~y~APE~l~~~~------~~~~~~DiwslG~il~elltG~~pf 333 (478)
|++++....+||+|||+....... ............-|.|||.+.+.. ..+.+.||||||++++|+++...||
T Consensus 79 nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~ 158 (484)
T KOG1023|consen 79 NCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPF 158 (484)
T ss_pred cceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcc
Confidence 999999999999999998765320 001111111244599999987531 1466799999999999999999999
Q ss_pred CCCCh----HHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHH
Q 011763 334 QGRTE----VEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASA 409 (478)
Q Consensus 334 ~~~~~----~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e 409 (478)
..... .+.+.++.. .+..+ ++ +.+.. ...+++++..+++.|+..+|..||++++
T Consensus 159 ~~~~~~~~~~eii~~~~~-~~~~~--------------~r------P~i~~-~~e~~~~l~~l~~~cw~e~P~~rPs~~~ 216 (484)
T KOG1023|consen 159 DLRNLVEDPDEIILRVKK-GGSNP--------------FR------PSIEL-LNELPPELLLLVARCWEEIPEKRPSIEQ 216 (484)
T ss_pred ccccccCChHHHHHHHHh-cCCCC--------------cC------cchhh-hhhcchHHHHHHHHhcccChhhCccHHH
Confidence 76332 233333322 11111 00 11111 1145668999999999999999999988
Q ss_pred HH
Q 011763 410 AL 411 (478)
Q Consensus 410 ~L 411 (478)
+-
T Consensus 217 i~ 218 (484)
T KOG1023|consen 217 IR 218 (484)
T ss_pred HH
Confidence 74
No 431
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.72 E-value=2.7e-17 Score=150.28 Aligned_cols=137 Identities=23% Similarity=0.217 Sum_probs=97.5
Q ss_pred eeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHH----------------------HHHHHHHHHhcCCCC--
Q 011763 135 LEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRF----------------------MAREILILRRLDHPN-- 190 (478)
Q Consensus 135 ~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~----------------------~~~E~~~l~~l~h~n-- 190 (478)
.+.||+|+||+||+|.+. +++.||||+++........... ...|...+..+.+..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 567999999999999976 7899999998764322111111 134666666664432
Q ss_pred eeeecceeeecCCceEEEEEeeccCCchh-hccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCcEEEecCC
Q 011763 191 IIKLEGLITSRLSCSIYLVFEYMEHDITG-LLSCPDIKFSEAQIKCYMNQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEG 268 (478)
Q Consensus 191 Iv~l~~~~~~~~~~~~~lv~e~~~~~ll~-~~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~ 268 (478)
+.++++. ...+|||||++++.+. ...... .. ...+..++.+++.++.++|. ++|+|+||||+||+++ ++
T Consensus 81 ~~~~~~~------~~~~lv~e~~~g~~~~~~~l~~~-~~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 81 VPKPIDL------NRHVLVMEFIGGDGIPAPRLKDV-RL-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DG 151 (187)
T ss_pred CCceEec------CCCEEEEEEeCCCCccChhhhhh-hh-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CC
Confidence 3333322 2358999999983221 111110 11 16788999999999999999 9999999999999999 89
Q ss_pred cEEEeeccccccc
Q 011763 269 VLKLADFGLANFS 281 (478)
Q Consensus 269 ~vkl~DFG~a~~~ 281 (478)
.++|+|||.+...
T Consensus 152 ~~~liDfg~a~~~ 164 (187)
T cd05119 152 KVYIIDVPQAVEI 164 (187)
T ss_pred cEEEEECcccccc
Confidence 9999999998644
No 432
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.72 E-value=3.4e-17 Score=173.70 Aligned_cols=139 Identities=17% Similarity=0.168 Sum_probs=106.5
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCC------hHHHHHHHHHHHHHHhcCCCCeeeecceeeecCC
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFE------PESVRFMAREILILRRLDHPNIIKLEGLITSRLS 203 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 203 (478)
..|...+.||+|+||+||++..... .+++|+....... ....+.+.+|++++..++|++|+....++.. .
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--~ 408 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD--P 408 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe--C
Confidence 3456789999999999999986443 3444433221111 1223557789999999999998877666555 3
Q ss_pred ceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeeccccccc
Q 011763 204 CSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFS 281 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~ 281 (478)
...++||||+++..+..+.. ....++.||+.+|.+||+.||+||||||+|||+ +++.++|+|||+++..
T Consensus 409 ~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 409 EEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred CCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 45789999999876655432 457789999999999999999999999999999 6789999999998653
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.68 E-value=4.2e-16 Score=147.87 Aligned_cols=138 Identities=18% Similarity=0.201 Sum_probs=101.8
Q ss_pred eeee-ecCceEEEEEEECCCCcEEEEEEeecCCC-----------ChHHHHHHHHHHHHHHhcCCCCe--eeecceeeec
Q 011763 136 EKIG-QGTYSSVFRARDLDTGKIVALKKVRFDNF-----------EPESVRFMAREILILRRLDHPNI--IKLEGLITSR 201 (478)
Q Consensus 136 ~~LG-~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-----------~~~~~~~~~~E~~~l~~l~h~nI--v~l~~~~~~~ 201 (478)
..|| .|+.|+||.+.. .+..++||.+..... +......+.+|+.++..|.|++| +..+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4576 789999999976 367899998854221 11233567789999999988775 6666654432
Q ss_pred CCc--eEEEEEeeccC-CchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccc
Q 011763 202 LSC--SIYLVFEYMEH-DITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLA 278 (478)
Q Consensus 202 ~~~--~~~lv~e~~~~-~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a 278 (478)
... ..+||||++++ ..+..+... ..+++.. +.||+.+|.+||++||+|+||||.|||++.++.++|+|||.+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~ 189 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRG 189 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCc
Confidence 222 23599999997 455444333 2455543 568999999999999999999999999999999999999988
Q ss_pred cc
Q 011763 279 NF 280 (478)
Q Consensus 279 ~~ 280 (478)
..
T Consensus 190 ~~ 191 (239)
T PRK01723 190 EL 191 (239)
T ss_pred cc
Confidence 54
No 434
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.66 E-value=9.8e-16 Score=133.73 Aligned_cols=132 Identities=23% Similarity=0.241 Sum_probs=108.9
Q ss_pred eeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCC--CCeeeecceeeecCCceEEEEEe
Q 011763 134 KLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDH--PNIIKLEGLITSRLSCSIYLVFE 211 (478)
Q Consensus 134 ~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~nIv~l~~~~~~~~~~~~~lv~e 211 (478)
+++.||.|.++.||++.... ..+++|.+..... ...+.+|+.++..+.| .++++++.++.. .+..+++||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~--~~~~~~v~e 73 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGES--DGWSYLLME 73 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCC--CCccEEEEE
Confidence 46789999999999999743 7899999865432 3567789999999976 588888777765 466899999
Q ss_pred eccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCCCcEEEecCCcEEEeecccccc
Q 011763 212 YMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSR---GVLHRDIKGSNLLVNNEGVLKLADFGLANF 280 (478)
Q Consensus 212 ~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~vkl~DFG~a~~ 280 (478)
|+.+..+..+ +......++.+++.+|.+||.. +++|+||+|.||++++.+.++|+|||.+..
T Consensus 74 ~~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 74 WIEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 9998655433 5567778899999999999985 699999999999999989999999999864
No 435
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.66 E-value=4.1e-16 Score=158.64 Aligned_cols=256 Identities=21% Similarity=0.280 Sum_probs=197.4
Q ss_pred ccceeeeeeeee--cCceEEEEEEE--CCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceeeecCC
Q 011763 129 ADAFEKLEKIGQ--GTYSSVFRARD--LDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLITSRLS 203 (478)
Q Consensus 129 ~~~y~~~~~LG~--G~~g~V~~~~~--~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~ 203 (478)
...|.+.+.+|. |.+|.||.+.. ..++..+|+|.-+.....+.....-.+|+.....+ .|+|.++.+..+.. .
T Consensus 113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~--~ 190 (524)
T KOG0601|consen 113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG--S 190 (524)
T ss_pred hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccccc--C
Confidence 446888999999 99999999988 88899999998443322222223334577777777 59999998777776 7
Q ss_pred ceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHH----HHHHHHhCCceeccCCCCcEEEecC-CcEEEeecccc
Q 011763 204 CSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLH----GLEHCHSRGVLHRDIKGSNLLVNNE-GVLKLADFGLA 278 (478)
Q Consensus 204 ~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~----aL~~LH~~givHrDlkp~NILl~~~-~~vkl~DFG~a 278 (478)
+..|+-+|++...+..........++...++.++.++.. ||.++|..+++|-|+||.||++..+ ...+++|||+.
T Consensus 191 ~~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v 270 (524)
T KOG0601|consen 191 GILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLV 270 (524)
T ss_pred CcceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCccee
Confidence 789999999998888877777777999999999999999 9999999999999999999999999 88999999998
Q ss_pred cccCCCCCCCc----cccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHHHHcCCC
Q 011763 279 NFSNTGHRQPL----TSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGR--TEVEQLHKIFKLCGSP 352 (478)
Q Consensus 279 ~~~~~~~~~~~----~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~--~~~~~~~~i~~~~g~~ 352 (478)
........... ....+...|++||++.+ -++...|||+||.++.+-.++..++... +...++.+++
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~--l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~------ 342 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLNG--LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY------ 342 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhhhcc--ccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc------
Confidence 77665432111 11244667999998764 5789999999999999998887665433 2222221111
Q ss_pred CchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCC
Q 011763 353 PDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 418 (478)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~ 418 (478)
...+.+...+.++...+..|+..||..|+++..+++|++...
T Consensus 343 ------------------------ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s 384 (524)
T KOG0601|consen 343 ------------------------IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS 384 (524)
T ss_pred ------------------------CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence 011223455666777999999999999999999999999875
No 436
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.64 E-value=7.4e-17 Score=171.79 Aligned_cols=269 Identities=24% Similarity=0.252 Sum_probs=201.4
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEE
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
.+.|.+.+-+-.|.++.++.+.-..++...++|+...... .....+.+..+-.++-..++|.++...--+.. ....+
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~--rsP~~ 880 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPC--RSPLP 880 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCC--CCCcc
Confidence 5678889999999999999998878887777777654322 22233344445555555566777766444333 55689
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCC---
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG--- 284 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~--- 284 (478)
|+++|++++.+..........+.+-++.++..+..++++||...++|+|++|.|+|+..+++.++.||+........
T Consensus 881 L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~ 960 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPT 960 (1205)
T ss_pred hhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCc
Confidence 99999988655555555556788888899999999999999999999999999999999999999999844221100
Q ss_pred -----C--------------C--------CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Q 011763 285 -----H--------------R--------QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRT 337 (478)
Q Consensus 285 -----~--------------~--------~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~ 337 (478)
. . .......+|+.|.+||.+.+ ......+|+|++|++++|.++|.+||....
T Consensus 961 ~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg-~~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen 961 TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLG-RRHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred CCcccccccCccccccccccccccccchhhccccccCCCcccCCccccc-ccCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence 0 0 00123466999999999987 566889999999999999999999999988
Q ss_pred hHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHH---HHHhCc
Q 011763 338 EVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATAS---AALASE 414 (478)
Q Consensus 338 ~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~---e~L~hp 414 (478)
.......|...--..| .-....+.++++++..+|..+|.+|..+. ++-.|+
T Consensus 1040 pq~~f~ni~~~~~~~p--------------------------~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~ 1093 (1205)
T KOG0606|consen 1040 PQQIFENILNRDIPWP--------------------------EGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHP 1093 (1205)
T ss_pred hhhhhhccccCCCCCC--------------------------CCccccChhhhhhhhhhhccCchhccCcccccccccCC
Confidence 8777766644211111 11135678899999999999999999987 889999
Q ss_pred ccCCCCCCCCCC
Q 011763 415 YFSTKPYACDLS 426 (478)
Q Consensus 415 ~f~~~~~~~~~~ 426 (478)
||+..+|.....
T Consensus 1094 ~~~~~~~~~l~~ 1105 (1205)
T KOG0606|consen 1094 FFQDVDWENLAL 1105 (1205)
T ss_pred ccCCCCcccccc
Confidence 999887765443
No 437
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.51 E-value=1.6e-13 Score=124.89 Aligned_cols=141 Identities=18% Similarity=0.193 Sum_probs=100.0
Q ss_pred eeeeeecCceEEEEEEECC------CCcEEEEEEeecCCC--------------------ChHHHHHH----HHHHHHHH
Q 011763 135 LEKIGQGTYSSVFRARDLD------TGKIVALKKVRFDNF--------------------EPESVRFM----AREILILR 184 (478)
Q Consensus 135 ~~~LG~G~~g~V~~~~~~~------~~~~vAlK~~~~~~~--------------------~~~~~~~~----~~E~~~l~ 184 (478)
...||.|.-+.||.|.... .+..+|||+.+.... .......+ .+|+..|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3568999999999998643 357899999753210 00111222 37999999
Q ss_pred hcCC--CCeeeecceeeecCCceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCceeccCCCCc
Q 011763 185 RLDH--PNIIKLEGLITSRLSCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHC-HSRGVLHRDIKGSN 261 (478)
Q Consensus 185 ~l~h--~nIv~l~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~L-H~~givHrDlkp~N 261 (478)
++.. -++++++++ ..-+|||||++++.+....-.+..+++..+..+..|++.+|..| |+.||||+||++.|
T Consensus 82 rl~~~Gv~vP~pi~~------~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~N 155 (197)
T cd05146 82 RMQKAGIPCPEVVVL------KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYN 155 (197)
T ss_pred HHHHcCCCCCeEEEe------cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence 9943 456666543 12479999998743221111222456667788889999999999 89999999999999
Q ss_pred EEEecCCcEEEeecccccccC
Q 011763 262 LLVNNEGVLKLADFGLANFSN 282 (478)
Q Consensus 262 ILl~~~~~vkl~DFG~a~~~~ 282 (478)
||+. ++.+.|+|||.+....
T Consensus 156 IL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 156 MLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred EEEE-CCcEEEEECCCceeCC
Confidence 9997 5789999999986543
No 438
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.47 E-value=1e-12 Score=135.32 Aligned_cols=171 Identities=22% Similarity=0.331 Sum_probs=127.6
Q ss_pred EE-EEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeeccCCchhhccCC
Q 011763 146 VF-RARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHDITGLLSCP 224 (478)
Q Consensus 146 V~-~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~ 224 (478)
+| .|..+.++.+|.|.+.+.... .....+.+-++.|+.|+||||+++++.+.. ...+|||+|-+..-. ..+.
T Consensus 27 ~~~~~t~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~--~~~~ylvTErV~Pl~-~~lk-- 99 (690)
T KOG1243|consen 27 LWPDGTRKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEE--EGTLYLVTERVRPLE-TVLK-- 99 (690)
T ss_pred cccccceeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcc--cCceEEEeeccccHH-HHHH--
Confidence 45 355667888999998876543 445566778899999999999999998877 568999999886411 1111
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHH-hCCceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccccCCcccCccc
Q 011763 225 DIKFSEAQIKCYMNQLLHGLEHCH-SRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPEL 303 (478)
Q Consensus 225 ~~~l~~~~~~~i~~qil~aL~~LH-~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~t~~y~APE~ 303 (478)
.+....+...+.||+.||.||| +.+++|++|.-..|+|+..|.+||++|.++........ +......-..|..|+.
T Consensus 100 --~l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~ 176 (690)
T KOG1243|consen 100 --ELGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEE 176 (690)
T ss_pred --HhHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhh
Confidence 2347778888999999999998 56899999999999999999999999999854432211 1111222334677775
Q ss_pred ccCCCCCCChhhHHHHHHHHHHHHhC
Q 011763 304 LLGATDYGPSVDLWSVGCVFAELLIG 329 (478)
Q Consensus 304 l~~~~~~~~~~DiwslG~il~elltG 329 (478)
+... +-..|.|-|||++++++.|
T Consensus 177 ~~~s---~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 177 IDPS---EWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred cCcc---ccchhhhhHHHHHHHHhCc
Confidence 5431 2457999999999999998
No 439
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.46 E-value=3.8e-14 Score=144.44 Aligned_cols=258 Identities=21% Similarity=0.228 Sum_probs=187.6
Q ss_pred cCcccccccceeeeeeeeecCceEEEEEEEC-CCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecceee
Q 011763 122 QGWVPLRADAFEKLEKIGQGTYSSVFRARDL-DTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEGLIT 199 (478)
Q Consensus 122 ~~~~~~~~~~y~~~~~LG~G~~g~V~~~~~~-~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~ 199 (478)
..|......+|..+..||.|.|+.|+.+... .++..|++|.+............-..|+.+...+ .|.+++..+..+.
T Consensus 257 ~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~ 336 (524)
T KOG0601|consen 257 SDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWS 336 (524)
T ss_pred cccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcc
Confidence 3344455678999999999999999998755 6788999998865544444444445688888777 5888888777665
Q ss_pred ecCCceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecC-CcEEEeecccc
Q 011763 200 SRLSCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE-GVLKLADFGLA 278 (478)
Q Consensus 200 ~~~~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~-~~vkl~DFG~a 278 (478)
. ....|+=.|||++....+.......+.+...+.+..|++.++.++|++.++|+|+||+||++..+ +..++.|||..
T Consensus 337 ~--~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 337 Q--LRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred c--cccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccc
Confidence 5 44567899999887666555555568888999999999999999999999999999999999886 77899999988
Q ss_pred cccCCCCCCCccccccCCccc-CcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhh
Q 011763 279 NFSNTGHRQPLTSRVVTLWYR-PPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYW 357 (478)
Q Consensus 279 ~~~~~~~~~~~~~~~~t~~y~-APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~ 357 (478)
...... .......-++. ..|++.....+..+.|+++||..+.+.+++.+.-....... .|..
T Consensus 415 t~~~~~----~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~---~i~~---------- 477 (524)
T KOG0601|consen 415 TRLAFS----SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSL---TIRS---------- 477 (524)
T ss_pred ccccee----cccccccccccccchhhccccccccccccccccccccccccCcccCcccccce---eeec----------
Confidence 532111 01112233455 36666666788899999999999999999875432211111 1100
Q ss_pred ccCCCCCccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccC
Q 011763 358 KKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFS 417 (478)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~ 417 (478)
..-...+.....+..+.+.|+..|+..|+.+.++..|.=|.
T Consensus 478 -------------------~~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 478 -------------------GDTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred -------------------ccccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 00001123346788899999999999999999998887664
No 440
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.42 E-value=9.1e-13 Score=135.71 Aligned_cols=143 Identities=20% Similarity=0.229 Sum_probs=94.5
Q ss_pred eeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChH--------------------------------HHH------HH
Q 011763 135 LEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPE--------------------------------SVR------FM 176 (478)
Q Consensus 135 ~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~--------------------------------~~~------~~ 176 (478)
.+.||.|++|.||+|+.. +|+.||||+.+......- ... .+
T Consensus 122 ~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 367999999999999864 789999999865321000 000 13
Q ss_pred HHHHHHHHhc----CCCCeeeecceeeecCCceEEEEEeeccCCchhhccCC-CCCCCHHHHHHHHHHHHH-HHHHHHhC
Q 011763 177 AREILILRRL----DHPNIIKLEGLITSRLSCSIYLVFEYMEHDITGLLSCP-DIKFSEAQIKCYMNQLLH-GLEHCHSR 250 (478)
Q Consensus 177 ~~E~~~l~~l----~h~nIv~l~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~-~~~l~~~~~~~i~~qil~-aL~~LH~~ 250 (478)
.+|+..+.++ .|.+-+.+-.++.+. ....+|||||++|..+..+... ...+ ....++.+++. .+..+|..
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYWDR-TSERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEehhh-cCCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHHHhC
Confidence 3455555555 233333443344322 2336899999998655443221 1112 22345555655 47889999
Q ss_pred CceeccCCCCcEEEecCCcEEEeecccccccC
Q 011763 251 GVLHRDIKGSNLLVNNEGVLKLADFGLANFSN 282 (478)
Q Consensus 251 givHrDlkp~NILl~~~~~vkl~DFG~a~~~~ 282 (478)
|++|+|++|.||++++++.++|+|||++....
T Consensus 277 g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 277 GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 99999999999999999999999999986554
No 441
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.42 E-value=8.9e-13 Score=118.17 Aligned_cols=127 Identities=17% Similarity=0.114 Sum_probs=93.1
Q ss_pred eeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCe-eeecceeeecCCceEEEEEeec
Q 011763 135 LEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNI-IKLEGLITSRLSCSIYLVFEYM 213 (478)
Q Consensus 135 ~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~~~lv~e~~ 213 (478)
++.|+.|.++.||+++.. +..|++|+...... ....+..|+.+++.+.+.++ ++++.... ...++||||+
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~~----~~~~lv~e~i 73 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFDP----ETGVLITEFI 73 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEeC----CCCeEEEEec
Confidence 467889999999999863 77899998754321 12234679999998865444 34443322 2247999999
Q ss_pred cCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCc-----eeccCCCCcEEEecCCcEEEeeccccc
Q 011763 214 EHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGV-----LHRDIKGSNLLVNNEGVLKLADFGLAN 279 (478)
Q Consensus 214 ~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gi-----vHrDlkp~NILl~~~~~vkl~DFG~a~ 279 (478)
++..+.... .....++.+++.+|..||..++ +|+|++|.||+++ ++.++|+||+.+.
T Consensus 74 ~G~~l~~~~--------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 74 EGSELLTED--------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred CCCcccccc--------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 986554320 1123456799999999999985 9999999999999 6789999999874
No 442
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.42 E-value=1.9e-13 Score=142.49 Aligned_cols=145 Identities=21% Similarity=0.309 Sum_probs=95.3
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC---------------------------Ch-----HHHHHH-
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF---------------------------EP-----ESVRFM- 176 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~---------------------------~~-----~~~~~~- 176 (478)
..|+. +.||.|++|.||+|+.+.+|+.||||+++.... +. +..+.+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 45776 899999999999999988899999999975421 00 111122
Q ss_pred -----HHHHHHHHhcC----CCCeeeecceeeecCCceEEEEEeeccCCchhhc---cCCCC---CCCHHHHHHHHHHHH
Q 011763 177 -----AREILILRRLD----HPNIIKLEGLITSRLSCSIYLVFEYMEHDITGLL---SCPDI---KFSEAQIKCYMNQLL 241 (478)
Q Consensus 177 -----~~E~~~l~~l~----h~nIv~l~~~~~~~~~~~~~lv~e~~~~~ll~~~---~~~~~---~l~~~~~~~i~~qil 241 (478)
.+|+..+.++. +.+.+.+-.++.+- ....+|||||+.|..+..+ ...+. .+.+..+..++.||+
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~-st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif 277 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDY-CSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF 277 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeeccc-CCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 23444444442 33334333333321 2346799999998655432 11111 244444555555554
Q ss_pred HHHHHHHhCCceeccCCCCcEEEecCC----cEEEeecccccccCC
Q 011763 242 HGLEHCHSRGVLHRDIKGSNLLVNNEG----VLKLADFGLANFSNT 283 (478)
Q Consensus 242 ~aL~~LH~~givHrDlkp~NILl~~~~----~vkl~DFG~a~~~~~ 283 (478)
..|++|+|+||.||+++.++ .++++|||++.....
T Consensus 278 -------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 278 -------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred -------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 58999999999999999988 999999999865543
No 443
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.37 E-value=8.2e-13 Score=124.92 Aligned_cols=240 Identities=18% Similarity=0.186 Sum_probs=153.1
Q ss_pred EEEEEEECCCCcEEEEEEeecCCC-C-hHHHHHHHHHHHHHHhcCCCCeeeecceeeecC---CceEEEEEeeccCCchh
Q 011763 145 SVFRARDLDTGKIVALKKVRFDNF-E-PESVRFMAREILILRRLDHPNIIKLEGLITSRL---SCSIYLVFEYMEHDITG 219 (478)
Q Consensus 145 ~V~~~~~~~~~~~vAlK~~~~~~~-~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~---~~~~~lv~e~~~~~ll~ 219 (478)
.||++-+...|..|+.-.++.... + ..+.+....-..-|-.+.|.|||+++.|+.+.. ...+.++.|||..+.+.
T Consensus 81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~ 160 (458)
T KOG1266|consen 81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLK 160 (458)
T ss_pred HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHH
Confidence 467777777777665443322110 0 111111112233455567999999999987532 23578999999965443
Q ss_pred hc----cCCCCCCCHHHHHHHHHHHHHHHHHHHhC--CceeccCCCCcEEEecCCcEEEeecccccccCCCCC---CCcc
Q 011763 220 LL----SCPDIKFSEAQIKCYMNQLLHGLEHCHSR--GVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR---QPLT 290 (478)
Q Consensus 220 ~~----~~~~~~l~~~~~~~i~~qil~aL~~LH~~--givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~---~~~~ 290 (478)
.+ ......+....+++|+.||+.||.|||+. -|+|+++...-|++..+|-+||.--........... ....
T Consensus 161 ~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~ 240 (458)
T KOG1266|consen 161 QFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKS 240 (458)
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhh
Confidence 33 23445688999999999999999999988 499999999999999999888753222111110000 0011
Q ss_pred ccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCC-CCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccC
Q 011763 291 SRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKP-ILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFK 369 (478)
Q Consensus 291 ~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~-pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 369 (478)
...+-++|.+||.=.. ...+.++|||+||....+|..+.- +-.+....+.-..|...+..
T Consensus 241 ~~~~~~g~~a~~sg~~-tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~------------------ 301 (458)
T KOG1266|consen 241 VNTSLPGFSAPESGTT-TNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIG------------------ 301 (458)
T ss_pred ccccCCccccCCcCcc-cccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheee------------------
Confidence 1233578999996443 456778999999999999987762 23332222222222211100
Q ss_pred CCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccC
Q 011763 370 PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFS 417 (478)
Q Consensus 370 ~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~ 417 (478)
.-...-.++|.+||+-.|..||++.++|.||.+-
T Consensus 302 --------------len~lqr~~i~kcl~~eP~~rp~ar~llfHpllf 335 (458)
T KOG1266|consen 302 --------------LENGLQRGSITKCLEGEPNGRPDARLLLFHPLLF 335 (458)
T ss_pred --------------ccCccccCcCcccccCCCCCCcchhhhhcCceee
Confidence 0011125689999999999999999999999753
No 444
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.23 E-value=4.8e-10 Score=112.46 Aligned_cols=212 Identities=19% Similarity=0.262 Sum_probs=151.9
Q ss_pred eEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCeeeecceeeec--CCceEEEEEeeccC--Cchh
Q 011763 144 SSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSR--LSCSIYLVFEYMEH--DITG 219 (478)
Q Consensus 144 g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~~~lv~e~~~~--~ll~ 219 (478)
.+.|+++...+|..|++|.++.+.. ........-+++++++.|.|||++.++|... ....++|||+|.++ .|.+
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~--~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRD--QSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccc--cCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 5789999999999999999954332 1111223467889999999999999988621 24568999999987 3333
Q ss_pred hccC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCC
Q 011763 220 LLSC--------------PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH 285 (478)
Q Consensus 220 ~~~~--------------~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~ 285 (478)
.+.. .+...+|..+|.|+.||..||.++|+.|+.-+-|.|.+||++.+-+++|..-|.......+.
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~ 447 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQEDP 447 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecCCC
Confidence 3321 22347899999999999999999999999999999999999998889988777765544322
Q ss_pred CCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCC-CCCCChHHH-HHHHHHHcCCCCchhhccCCCC
Q 011763 286 RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPI-LQGRTEVEQ-LHKIFKLCGSPPDDYWKKSKLP 363 (478)
Q Consensus 286 ~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~p-f~~~~~~~~-~~~i~~~~g~~~~~~~~~~~~~ 363 (478)
. |-+.. -.+-|.=-||.+++.|.+|..- ...+..... +..|
T Consensus 448 -------------~--~~le~----~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I------------------ 490 (655)
T KOG3741|consen 448 -------------T--EPLES----QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRI------------------ 490 (655)
T ss_pred -------------C--cchhH----HhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHh------------------
Confidence 0 11222 2356999999999999999632 222222222 2222
Q ss_pred CccccCCCCCCCccchhcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 364 HATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 364 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
...++.++.++|.-+...+++. -++.++|.|
T Consensus 491 ------------------~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 491 ------------------TTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred ------------------hhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 2357788888998888888875 667777644
No 445
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.22 E-value=1.3e-10 Score=108.61 Aligned_cols=144 Identities=19% Similarity=0.235 Sum_probs=104.4
Q ss_pred eeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCC--CCeeeecceeeecC-CceEEEEEe
Q 011763 135 LEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDH--PNIIKLEGLITSRL-SCSIYLVFE 211 (478)
Q Consensus 135 ~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~nIv~l~~~~~~~~-~~~~~lv~e 211 (478)
++.|+.|.++.||++... +|+.+++|+....... .....+.+|+.+++.+.+ .++.+++.+..... .+..++|||
T Consensus 3 ~~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred ceecCCCccceEEEEEec-CCcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 367889999999999864 3678999997644321 134457789999999965 34566665544321 125689999
Q ss_pred eccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh------------------------------------------
Q 011763 212 YMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHS------------------------------------------ 249 (478)
Q Consensus 212 ~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~------------------------------------------ 249 (478)
|++|..+...... ..+++.....++.+++..|..||+
T Consensus 81 ~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 81 RVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred EeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9998655543321 356777777888888888888874
Q ss_pred --------------CCceeccCCCCcEEEec--CCcEEEeeccccccc
Q 011763 250 --------------RGVLHRDIKGSNLLVNN--EGVLKLADFGLANFS 281 (478)
Q Consensus 250 --------------~givHrDlkp~NILl~~--~~~vkl~DFG~a~~~ 281 (478)
..++|+|++|.|||++. ++.+.|+||+.+...
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g 207 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLG 207 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccC
Confidence 23699999999999998 667899999988643
No 446
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.19 E-value=2.2e-10 Score=100.76 Aligned_cols=144 Identities=18% Similarity=0.257 Sum_probs=99.5
Q ss_pred eeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCC------hHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEE
Q 011763 134 KLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFE------PESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 134 ~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 207 (478)
.+..|-+|+-+.|+++.. .|+.+.||.=....+. .-...+..+|+++|.++.--.|.--.=+|.+. ..-+
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~--~~~~ 86 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDT--YGGQ 86 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEec--CCCe
Confidence 678888999999999975 6777778753322221 22234566899999998543332221144442 2346
Q ss_pred EEEeeccC--CchhhccCCCC-CCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCC---cEEEeeccccccc
Q 011763 208 LVFEYMEH--DITGLLSCPDI-KFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG---VLKLADFGLANFS 281 (478)
Q Consensus 208 lv~e~~~~--~ll~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~---~vkl~DFG~a~~~ 281 (478)
|+|||+++ ...+.+..... .........++++|-..+.-||.++|||+||..+||+|.+++ .+.|+|||++...
T Consensus 87 i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 87 IYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 89999998 44444433222 233334478889999999999999999999999999998775 3589999998544
No 447
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.19 E-value=7.3e-12 Score=129.54 Aligned_cols=156 Identities=25% Similarity=0.355 Sum_probs=116.1
Q ss_pred HHHHHHHHHHhC-CceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccc--------cccCCcccCcccccCCCC
Q 011763 239 QLLHGLEHCHSR-GVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTS--------RVVTLWYRPPELLLGATD 309 (478)
Q Consensus 239 qil~aL~~LH~~-givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~--------~~~t~~y~APE~l~~~~~ 309 (478)
+.+.||.|+|.. ++||++|.|++|.++..+.+||+.|+++.........+... ......|.|||++.+ ..
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~-~~ 185 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG-TT 185 (700)
T ss_pred cccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc-cc
Confidence 334899999976 89999999999999999999999999986554422211111 122567999999987 67
Q ss_pred CCChhhHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCchh
Q 011763 310 YGPSVDLWSVGCVFAELL-IGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTT 388 (478)
Q Consensus 310 ~~~~~DiwslG~il~ell-tG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 388 (478)
.+.++|+|||||++|.+. .|+..|...........-....+ ......-..+|++
T Consensus 186 ~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~-------------------------~~~~~~s~~~p~e 240 (700)
T KOG2137|consen 186 NTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLN-------------------------AGAFGYSNNLPSE 240 (700)
T ss_pred ccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccc-------------------------cccccccccCcHH
Confidence 789999999999999999 57777766544333322211110 0111111578999
Q ss_pred HHHHHHHhcCCCCCCccCHHHHHhCcccCCCC
Q 011763 389 AVNLIETLLSVEPYKRATASAALASEYFSTKP 420 (478)
Q Consensus 389 l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~ 420 (478)
+++=|.++|..|+..||++.+++..|||.+..
T Consensus 241 l~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~ 272 (700)
T KOG2137|consen 241 LRESLKKLLNGDSAVRPTLDLLLSIPFFSDPG 272 (700)
T ss_pred HHHHHHHHhcCCcccCcchhhhhcccccCCch
Confidence 99999999999999999999999999998743
No 448
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.18 E-value=2.2e-10 Score=101.15 Aligned_cols=133 Identities=20% Similarity=0.287 Sum_probs=92.3
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCC-ChHH-----HHHHHHHHHHHHhcCCC--CeeeecceeeecCCceEE
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF-EPES-----VRFMAREILILRRLDHP--NIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~-~~~~-----~~~~~~E~~~l~~l~h~--nIv~l~~~~~~~~~~~~~ 207 (478)
..+++|+-+.++.+.. -|..+++|.=..... .++. .+...+|+.+|.++.-- +.+.++++ + .....
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dv--D--~~~~~ 75 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDV--D--PDNGL 75 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEE--c--CCCCE
Confidence 3567899999999865 344466664322222 2222 23456799999988543 33444433 3 33456
Q ss_pred EEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccC
Q 011763 208 LVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSN 282 (478)
Q Consensus 208 lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~ 282 (478)
|+|||++|.++....... ...++..+-.-+.-||..||||+||.++||++..++ +.++|||++.+..
T Consensus 76 I~me~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s~ 142 (204)
T COG3642 76 IVMEYIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFSD 142 (204)
T ss_pred EEEEEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccccc
Confidence 999999998877555433 245666777778889999999999999999998765 9999999986543
No 449
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.14 E-value=4.1e-10 Score=102.20 Aligned_cols=128 Identities=26% Similarity=0.313 Sum_probs=82.4
Q ss_pred EEEEEEECCCCcEEEEEEeecCC------------------------CChHHHHHHHHHHHHHHhcCCC--Ceeeeccee
Q 011763 145 SVFRARDLDTGKIVALKKVRFDN------------------------FEPESVRFMAREILILRRLDHP--NIIKLEGLI 198 (478)
Q Consensus 145 ~V~~~~~~~~~~~vAlK~~~~~~------------------------~~~~~~~~~~~E~~~l~~l~h~--nIv~l~~~~ 198 (478)
.||.|.. ..+..+|||+.+... ..........+|.++|.++..- ++++++++-
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 4899986 457899999975321 0011123456799999999655 566665432
Q ss_pred eecCCceEEEEEeecc--CCchhhccCCCCCCCHHHHHHHHHHHHHHHHH-HHhCCceeccCCCCcEEEecCCcEEEeec
Q 011763 199 TSRLSCSIYLVFEYME--HDITGLLSCPDIKFSEAQIKCYMNQLLHGLEH-CHSRGVLHRDIKGSNLLVNNEGVLKLADF 275 (478)
Q Consensus 199 ~~~~~~~~~lv~e~~~--~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~-LH~~givHrDlkp~NILl~~~~~vkl~DF 275 (478)
. -+|||||++ |..+..+.... ++......++.+++..+.. +|..||+|+||.+.|||++++ .+.|+||
T Consensus 80 ----~--~~ivME~I~~~G~~~~~l~~~~--~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf 150 (188)
T PF01163_consen 80 ----R--NVIVMEYIGEDGVPLPRLKDVD--LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDF 150 (188)
T ss_dssp ----T--TEEEEE--EETTEEGGCHHHCG--GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--G
T ss_pred ----C--CEEEEEecCCCccchhhHHhcc--ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEec
Confidence 1 269999999 65454443322 2244566777788885555 579999999999999999987 9999999
Q ss_pred ccccccC
Q 011763 276 GLANFSN 282 (478)
Q Consensus 276 G~a~~~~ 282 (478)
|.+....
T Consensus 151 ~qav~~~ 157 (188)
T PF01163_consen 151 GQAVDSS 157 (188)
T ss_dssp TTEEETT
T ss_pred CcceecC
Confidence 9986543
No 450
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=99.01 E-value=3.6e-09 Score=99.02 Aligned_cols=138 Identities=26% Similarity=0.263 Sum_probs=101.1
Q ss_pred eeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCC--------------------CChHHHHHHHHHHHHHHhcCCC--
Q 011763 132 FEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDN--------------------FEPESVRFMAREILILRRLDHP-- 189 (478)
Q Consensus 132 y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~--------------------~~~~~~~~~~~E~~~l~~l~h~-- 189 (478)
+.+..+||-|.-+.||.|.+. .|.++|||.=+... +-........+|.++|++|.-.
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 456789999999999999975 68899999743211 0012233456799999999544
Q ss_pred CeeeecceeeecCCceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCc
Q 011763 190 NIIKLEGLITSRLSCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGV 269 (478)
Q Consensus 190 nIv~l~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~ 269 (478)
.+++.+++ +...+||||++|-.+.... +.......++..|+.-+.-+-..||||+|+.+-|||++++|.
T Consensus 172 ~VP~P~~~------nRHaVvMe~ieG~eL~~~r-----~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~ 240 (304)
T COG0478 172 KVPKPIAW------NRHAVVMEYIEGVELYRLR-----LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGD 240 (304)
T ss_pred CCCCcccc------ccceeeeehcccceeeccc-----CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCC
Confidence 66666552 3457999999996655443 134445555666666666666899999999999999999999
Q ss_pred EEEeeccccccc
Q 011763 270 LKLADFGLANFS 281 (478)
Q Consensus 270 vkl~DFG~a~~~ 281 (478)
+.++||-.+...
T Consensus 241 ~~vIDwPQ~v~~ 252 (304)
T COG0478 241 IVVIDWPQAVPI 252 (304)
T ss_pred EEEEeCcccccC
Confidence 999999887543
No 451
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.99 E-value=9.8e-09 Score=98.72 Aligned_cols=132 Identities=16% Similarity=0.116 Sum_probs=88.9
Q ss_pred EEEEEECCCCcEEEEEEeecCCCCh---------HHHHHHHHHHHHHHhcCCCCe--eeecceeeecC---CceEEEEEe
Q 011763 146 VFRARDLDTGKIVALKKVRFDNFEP---------ESVRFMAREILILRRLDHPNI--IKLEGLITSRL---SCSIYLVFE 211 (478)
Q Consensus 146 V~~~~~~~~~~~vAlK~~~~~~~~~---------~~~~~~~~E~~~l~~l~h~nI--v~l~~~~~~~~---~~~~~lv~e 211 (478)
|++... .|+.|.||......... .....+.+|...+.+|..-+| +.++.+..... ....+||+|
T Consensus 38 vvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte 115 (268)
T PRK15123 38 TLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE 115 (268)
T ss_pred EEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence 555543 56788999764322110 001136688888888843333 33334443211 234689999
Q ss_pred eccCC-chhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEec-------CCcEEEeeccccc
Q 011763 212 YMEHD-ITGLLSC--PDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNN-------EGVLKLADFGLAN 279 (478)
Q Consensus 212 ~~~~~-ll~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~-------~~~vkl~DFG~a~ 279 (478)
++++. .+..+.. .....+......++.+|+..+.-||+.||+|+||++.||||+. +..+.|+||+.+.
T Consensus 116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 99984 3433322 1234567778899999999999999999999999999999985 4689999999875
No 452
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.91 E-value=4e-08 Score=96.59 Aligned_cols=259 Identities=15% Similarity=0.140 Sum_probs=154.8
Q ss_pred eeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhc-CCCCeeeecc----e-eeecCCce
Q 011763 132 FEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRL-DHPNIIKLEG----L-ITSRLSCS 205 (478)
Q Consensus 132 y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~----~-~~~~~~~~ 205 (478)
....+.||+|+-+.+|-.-.. +. .+.|+.....- .... +-+..|... .||-+-.-+. . +-...+..
T Consensus 13 i~~gr~LgqGgea~ly~l~e~--~d-~VAKIYh~Ppp--a~~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~ 84 (637)
T COG4248 13 IPPGRPLGQGGEADLYTLGEV--RD-QVAKIYHAPPP--AAQA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKV 84 (637)
T ss_pred cCCCccccCCccceeeecchh--hc-hhheeecCCCc--hHHH---HHHHHhccCCCCcchhhhhcccHHHhhCCCccce
Confidence 344578999999999976432 22 34577764432 1111 223334443 5664432111 1 11122334
Q ss_pred EEEEEeeccCC--chhhcc-----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccc
Q 011763 206 IYLVFEYMEHD--ITGLLS-----CPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLA 278 (478)
Q Consensus 206 ~~lv~e~~~~~--ll~~~~-----~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a 278 (478)
+-+.|+.+.+. ....+. +.-....++.+...++.|+.+.+.||+.|.+-+|+.++|+|+.+++.|.|.|=..-
T Consensus 85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccce
Confidence 77889888762 222221 12234678899999999999999999999999999999999999999999986544
Q ss_pred cccCCCCCCCccccccCCcccCcccccC----CCCCCChhhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHcCCCC
Q 011763 279 NFSNTGHRQPLTSRVVTLWYRPPELLLG----ATDYGPSVDLWSVGCVFAELLIG-KPILQGRTEVEQLHKIFKLCGSPP 353 (478)
Q Consensus 279 ~~~~~~~~~~~~~~~~t~~y~APE~l~~----~~~~~~~~DiwslG~il~elltG-~~pf~~~~~~~~~~~i~~~~g~~~ 353 (478)
..... .......++...|.+||.-.- .-.-+...|.|.||+++|+|+.| +.||.+.....- -+.|-
T Consensus 165 qi~~n--g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~-------ap~p~ 235 (637)
T COG4248 165 QINAN--GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISD-------APNPL 235 (637)
T ss_pred eeccC--CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCC-------CCCcc
Confidence 33322 233345678899999996431 12346678999999999999986 899987531100 00000
Q ss_pred chhhccCCCCCccccCCCCCCCc-cchhcccCCchhHHHHHHHhcCC--CCCCccCHHH
Q 011763 354 DDYWKKSKLPHATLFKPQQPYDS-SLRETFKDLPTTAVNLIETLLSV--EPYKRATASA 409 (478)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~l~~Li~~mL~~--dP~~R~ta~e 409 (478)
+..+....+..... ....+.. ...--|.-+++++..|..+|+.. ++.-|||++.
T Consensus 236 E~~Ia~g~f~ya~~--~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a 292 (637)
T COG4248 236 ETDIAHGRFAYASD--QRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA 292 (637)
T ss_pred hhhhhcceeeechh--ccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence 00000000000000 0000000 11112346789999999999874 3568999763
No 453
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.85 E-value=7.1e-08 Score=89.55 Aligned_cols=139 Identities=19% Similarity=0.238 Sum_probs=96.6
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCC--------------------ChHHH--HHHHHHHHHHHhcC--CCCe
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF--------------------EPESV--RFMAREILILRRLD--HPNI 191 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~--------------------~~~~~--~~~~~E~~~l~~l~--h~nI 191 (478)
-.|..|.-+.||+|.. .++..||+|+++.... +.... .....|+..|.++. +-.+
T Consensus 54 g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrv 132 (268)
T COG1718 54 GCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRV 132 (268)
T ss_pred eeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3566777788999984 5688999999864321 11111 12235888888883 4445
Q ss_pred eeecceeeecCCceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCcEEEecCCcE
Q 011763 192 IKLEGLITSRLSCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEGVL 270 (478)
Q Consensus 192 v~l~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~v 270 (478)
++-+.+.. -.|||||++....-.-.-.+.++...++..+..++++.+.-|-. .++||+||..-|||+. ++.+
T Consensus 133 P~Pi~~~~------nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p 205 (268)
T COG1718 133 PEPIAFRN------NVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEP 205 (268)
T ss_pred CCceeecC------CeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCeE
Confidence 55554432 36999999865221111122244555788888899999988887 8999999999999999 8899
Q ss_pred EEeecccccccC
Q 011763 271 KLADFGLANFSN 282 (478)
Q Consensus 271 kl~DFG~a~~~~ 282 (478)
.|+||+.|....
T Consensus 206 ~iID~~QaV~~~ 217 (268)
T COG1718 206 YIIDVSQAVTID 217 (268)
T ss_pred EEEECccccccC
Confidence 999999986443
No 454
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.83 E-value=2.9e-08 Score=92.09 Aligned_cols=108 Identities=21% Similarity=0.202 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHhcCCC--CeeeecceeeecCC--ceEEEEEeeccCC-chhhccCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 011763 174 RFMAREILILRRLDHP--NIIKLEGLITSRLS--CSIYLVFEYMEHD-ITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCH 248 (478)
Q Consensus 174 ~~~~~E~~~l~~l~h~--nIv~l~~~~~~~~~--~~~~lv~e~~~~~-ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH 248 (478)
....+|...+..|..- .+++.+.+.....+ ...+||+|++++. .+..+......++......++.+++..+.-||
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH 135 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLH 135 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHH
Confidence 3566788888887433 23444444443222 3458999999973 44444443223677788899999999999999
Q ss_pred hCCceeccCCCCcEEEecCC---cEEEeeccccccc
Q 011763 249 SRGVLHRDIKGSNLLVNNEG---VLKLADFGLANFS 281 (478)
Q Consensus 249 ~~givHrDlkp~NILl~~~~---~vkl~DFG~a~~~ 281 (478)
++||+|+|+++.|||++.++ .+.|+||+.++..
T Consensus 136 ~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 136 DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99999999999999999987 8999999987643
No 455
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.66 E-value=7.6e-09 Score=106.37 Aligned_cols=246 Identities=16% Similarity=0.133 Sum_probs=166.0
Q ss_pred cceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCC-eeeecceeeecCCceEEE
Q 011763 130 DAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPN-IIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 130 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~~~~~~l 208 (478)
.-|...+.+++++++++++.+...+...+ .+.+... ....-++++|.+++||| .+..++-+ +.+.+.++
T Consensus 242 kws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~-------l~~rl~~eLLdK~n~P~~~v~~~~d~--~~E~~~~i 311 (829)
T KOG0576|consen 242 KWSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT-------LSRRLAIELLDKVNNPNPVVRYLEDY--DGEDYLWI 311 (829)
T ss_pred cchHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc-------hhhHHHHHHHHHccCCCCcccccccC--Ccccccch
Confidence 34667788899999999999876665544 6665422 22334889999999999 44443333 33678899
Q ss_pred EEeeccCC--chhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeecccccccCCCCC
Q 011763 209 VFEYMEHD--ITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR 286 (478)
Q Consensus 209 v~e~~~~~--ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~ 286 (478)
+++++..+ ...........+.+-+...+.+.-+++|++||+.--+|+| ||+..+ +..+..||+.........
T Consensus 312 ~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~- 385 (829)
T KOG0576|consen 312 PMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM- 385 (829)
T ss_pred hhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccCccc-
Confidence 99999865 3333333333455556666777778899999998778998 777665 788999999886655432
Q ss_pred CCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCcc
Q 011763 287 QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHAT 366 (478)
Q Consensus 287 ~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 366 (478)
...+..+|+.++|||+... ..+....|.|+++.--.+|.-|-+|-.... .... ..|..+
T Consensus 386 -~~~t~~~~~~~~~pev~~~-~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~--~~~~----~~g~~p------------- 444 (829)
T KOG0576|consen 386 -KPRTAIGTPEPLAPEVIQE-NTIDGCPDSGSLAVSAIQMAPGLPPRSSPP--AVLP----MIGNGP------------- 444 (829)
T ss_pred -ccccCCCCCCCCCchhhcc-cccccCCCccCCCcchhhcCCCCCCCCCCc--cccC----CCCCCC-------------
Confidence 2355678999999998876 668889999999987777777777654310 0000 001100
Q ss_pred ccCCCCCCCccch--hcccCCchhHHHHHHHhcCCCCCCccCHHHHHhCcccCCCCC
Q 011763 367 LFKPQQPYDSSLR--ETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPY 421 (478)
Q Consensus 367 ~~~~~~~~~~~l~--~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~hp~f~~~~~ 421 (478)
-...|. ..|.... -.++...|+...|..|++...++.|.+|+.-+.
T Consensus 445 -------~s~~L~~~~aw~~~~--~~~~~~~~~~g~P~~pkv~mgacfsKvfngCpl 492 (829)
T KOG0576|consen 445 -------NSPMLTDKSAWSPVF--HRDFPAPCLNGLPPTPKVHMGACFSKVFNGCPL 492 (829)
T ss_pred -------CccccchhhhcCccc--ccCCcccccCCCCCCCcchhhHHHHHHhccCcc
Confidence 000010 1111111 115778899999999999999999999987444
No 456
>PRK09902 hypothetical protein; Provisional
Probab=98.64 E-value=5.7e-07 Score=82.39 Aligned_cols=139 Identities=17% Similarity=0.171 Sum_probs=96.8
Q ss_pred eecCceEEEEEEECCCCcEEEEEEeecCC---CC-hHHHHHHHHHHHHHHhcCCC--Ceeeecceee---ecCCceEEEE
Q 011763 139 GQGTYSSVFRARDLDTGKIVALKKVRFDN---FE-PESVRFMAREILILRRLDHP--NIIKLEGLIT---SRLSCSIYLV 209 (478)
Q Consensus 139 G~G~~g~V~~~~~~~~~~~vAlK~~~~~~---~~-~~~~~~~~~E~~~l~~l~h~--nIv~l~~~~~---~~~~~~~~lv 209 (478)
|.||-+.|+.... .|+.+-+|.-.... +. +.....+.+|+..|+.|..- .++++. ++. ....-..+||
T Consensus 27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 4588888988764 34468888753111 11 33456788999999999532 244444 332 1112235899
Q ss_pred EeeccC--CchhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCc--EEEeecccccc
Q 011763 210 FEYMEH--DITGLLSCP-DIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGV--LKLADFGLANF 280 (478)
Q Consensus 210 ~e~~~~--~ll~~~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~--vkl~DFG~a~~ 280 (478)
+|-+++ ++...+... -.+.++.....++.+|+..|.-||+.|+.|+|+-+.|||++.++. ++++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 998885 343333221 235677788899999999999999999999999999999987777 99999997753
No 457
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.61 E-value=7.5e-07 Score=81.92 Aligned_cols=140 Identities=19% Similarity=0.218 Sum_probs=89.0
Q ss_pred ccceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHH-HHH------HHHHHHHHHhcC---CCCeeeeccee
Q 011763 129 ADAFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPES-VRF------MAREILILRRLD---HPNIIKLEGLI 198 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~-~~~------~~~E~~~l~~l~---h~nIv~l~~~~ 198 (478)
..+|.+++.+-......|.+..- +++.+++|..+......+. ... ..+++..+.++. ...+..++-+.
T Consensus 30 ~~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred hCCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 35899999998888888888763 6788999987654321111 111 123444444442 22222222222
Q ss_pred ee---cCCceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCCcEEEeec
Q 011763 199 TS---RLSCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADF 275 (478)
Q Consensus 199 ~~---~~~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~vkl~DF 275 (478)
.- ......+|+|||++|-.+..+.. +++ .+...|..++.-||+.|++|+|..|.|++++++ .++++||
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~-~i~iID~ 178 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIED----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNN-GIRIIDT 178 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchh----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECC-cEEEEEC
Confidence 11 11234568999999965443321 222 244567778999999999999999999999854 5999999
Q ss_pred cccc
Q 011763 276 GLAN 279 (478)
Q Consensus 276 G~a~ 279 (478)
+..+
T Consensus 179 ~~k~ 182 (229)
T PF06176_consen 179 QGKR 182 (229)
T ss_pred cccc
Confidence 8764
No 458
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.53 E-value=1.8e-06 Score=80.95 Aligned_cols=139 Identities=22% Similarity=0.313 Sum_probs=80.5
Q ss_pred eeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCC--Ceeeecceeee-cCCceEEEEEe
Q 011763 135 LEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHP--NIIKLEGLITS-RLSCSIYLVFE 211 (478)
Q Consensus 135 ~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~--nIv~l~~~~~~-~~~~~~~lv~e 211 (478)
++.|+.|..+.||++.... ..+++|+.... .....+.+|+.+++.|... .+.+++..... ......+++|+
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~ 75 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLME 75 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEE
Confidence 5789999999999998654 48999997532 4556777899999888432 34566553322 12345799999
Q ss_pred eccCCchhhc--------------------cC---CCCCCCHHH------HHHH---------------HHHHHH-HHHH
Q 011763 212 YMEHDITGLL--------------------SC---PDIKFSEAQ------IKCY---------------MNQLLH-GLEH 246 (478)
Q Consensus 212 ~~~~~ll~~~--------------------~~---~~~~l~~~~------~~~i---------------~~qil~-aL~~ 246 (478)
++++..+... .. ....+.... .... ...+.. .+..
T Consensus 76 ~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (239)
T PF01636_consen 76 YIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQE 155 (239)
T ss_dssp EESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred EeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHH
Confidence 9998654440 00 001111000 0000 011222 2333
Q ss_pred HHh-------CCceeccCCCCcEEEe-cCCcEEEeeccccc
Q 011763 247 CHS-------RGVLHRDIKGSNLLVN-NEGVLKLADFGLAN 279 (478)
Q Consensus 247 LH~-------~givHrDlkp~NILl~-~~~~vkl~DFG~a~ 279 (478)
+++ ..++|+|+.|.|||++ .++.+-|+||+.+.
T Consensus 156 ~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 156 LEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred HHhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 332 3599999999999999 56667899998764
No 459
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.49 E-value=1.5e-06 Score=81.73 Aligned_cols=133 Identities=14% Similarity=0.133 Sum_probs=79.5
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCC--eeeecceeeecCCceEEEEEeec
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPN--IIKLEGLITSRLSCSIYLVFEYM 213 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~~~~~~~~~~lv~e~~ 213 (478)
..||.|..+.||+.. +..+++|...... ....+.+|.++++.+..-. +.+++++... .....+|||++
T Consensus 7 ~~i~~G~t~~~y~~~----~~~~VlR~~~~~~----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~--~~~~glv~e~i 76 (226)
T TIGR02172 7 TQTGEGGNGESYTHK----TGKWMLKLYNPGF----DKETIKREFDASRKVFSLGIPTPHPFDLVED--GGRLGLIYELI 76 (226)
T ss_pred eeecCCCCcceeEec----CCCEEEEeCCCCC----CHHHHHHHHHHHHHHHHcCCCCCceEEEEec--CCeeeeeeeec
Confidence 578999999999842 4467889876422 2234678999999985433 3555555544 45578899999
Q ss_pred cCCc-hhhcc----------------------C---CCCCCCHHHHHHHHHHH----------HH-HHHHHHh----CCc
Q 011763 214 EHDI-TGLLS----------------------C---PDIKFSEAQIKCYMNQL----------LH-GLEHCHS----RGV 252 (478)
Q Consensus 214 ~~~l-l~~~~----------------------~---~~~~l~~~~~~~i~~qi----------l~-aL~~LH~----~gi 252 (478)
+|.. ..... . ....++. ....+..++ .. ...+|.. ..+
T Consensus 77 ~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~-~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~ 155 (226)
T TIGR02172 77 VGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQS-YKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTC 155 (226)
T ss_pred CCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHH-HHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCce
Confidence 9852 11000 0 0001110 001110000 11 1122221 247
Q ss_pred eeccCCCCcEEEecCCcEEEeecccccc
Q 011763 253 LHRDIKGSNLLVNNEGVLKLADFGLANF 280 (478)
Q Consensus 253 vHrDlkp~NILl~~~~~vkl~DFG~a~~ 280 (478)
+|+|+.|.||++++++ +.|+||+.+..
T Consensus 156 ~HgD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 156 LHGDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred EecCCCCCcEEEcCCC-cEEEechhcCc
Confidence 8999999999999888 99999998753
No 460
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.33 E-value=3.2e-06 Score=88.19 Aligned_cols=144 Identities=19% Similarity=0.235 Sum_probs=86.0
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCC---------------------------CCh-HH----HHH------HH
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDN---------------------------FEP-ES----VRF------MA 177 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~---------------------------~~~-~~----~~~------~~ 177 (478)
..|+.++-|.||+|+.. +|+.||||+.+.+- ... +. .+. +.
T Consensus 131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 67899999999999975 49999999986431 000 00 111 22
Q ss_pred HHHHHHHhcC----CCCeeeecceeeecCCceEEEEEeeccCCchhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 011763 178 REILILRRLD----HPNIIKLEGLITSRLSCSIYLVFEYMEHDITGLLS-CPDIKFSEAQIKCYMNQLLHGLEHCHSRGV 252 (478)
Q Consensus 178 ~E~~~l~~l~----h~nIv~l~~~~~~~~~~~~~lv~e~~~~~ll~~~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~gi 252 (478)
+|...+.++. ...-+.+-.+|.+- ...-.|+|||++|--+.... -....++...+.....++. +..+-..|+
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~-t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f--~~q~~~dgf 286 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYWEY-TTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAF--LRQLLRDGF 286 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeehhc-cCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCc
Confidence 3555555541 12222232333221 23357999999994333321 1112344333322222221 223334799
Q ss_pred eeccCCCCcEEEecCCcEEEeecccccccCC
Q 011763 253 LHRDIKGSNLLVNNEGVLKLADFGLANFSNT 283 (478)
Q Consensus 253 vHrDlkp~NILl~~~~~vkl~DFG~a~~~~~ 283 (478)
+|.|.+|.||+++.+|.+.+.|||+.....+
T Consensus 287 fHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 287 FHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred cccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 9999999999999999999999999865543
No 461
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.32 E-value=1.8e-06 Score=94.84 Aligned_cols=202 Identities=18% Similarity=0.177 Sum_probs=136.0
Q ss_pred HHHHHHHHHhcCCCCeeeecceeeecCCce--EEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCce
Q 011763 176 MAREILILRRLDHPNIIKLEGLITSRLSCS--IYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVL 253 (478)
Q Consensus 176 ~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~--~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~giv 253 (478)
...|+..+.+..|+|++.++.|-....... ..+..+++....+..+...-...+...++.+..+++.||.|+|+....
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~l~ 308 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLSLE 308 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhccc
Confidence 345777888889999999877654432221 223446666655555566666889999999999999999999998655
Q ss_pred eccCCCC---cEEEecCCcEEEe--ecccccccCCCCCCCccccccCCcccCcccccCCCCCCC--hhhHHHHHHHHHHH
Q 011763 254 HRDIKGS---NLLVNNEGVLKLA--DFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGP--SVDLWSVGCVFAEL 326 (478)
Q Consensus 254 HrDlkp~---NILl~~~~~vkl~--DFG~a~~~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~--~~DiwslG~il~el 326 (478)
|.-|... +...+.++.+.+. ||+.......... ......+..+.++|.... ..+.. ..|+|++|..+..+
T Consensus 309 ~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~--~~~~~~~~~~~~~e~~~~-~~~~~~r~~dL~~lgll~~~~ 385 (1351)
T KOG1035|consen 309 HVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK--SFSDLLAEIRNADEDLKE-NTAKKSRLTDLWCLGLLLLQL 385 (1351)
T ss_pred eeEEecccccccccCccceeecchhhhcccccCCCccc--chhhcCcccccccccccc-ccchhhhhhHHHHHHHHHhhh
Confidence 5555444 3444555667766 8988876554321 223344666888887654 33333 36999999999999
Q ss_pred HhCCCCCCCCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccchhcccCCc-hhHHHHHHHhcCCCCCCcc
Q 011763 327 LIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLP-TTAVNLIETLLSVEPYKRA 405 (478)
Q Consensus 327 ltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~l~~Li~~mL~~dP~~R~ 405 (478)
..|..+-... ..+. ....... ....+++.+|+.-|+++|+
T Consensus 386 ~~~~~i~~~~------~~~~---------------------------------~~l~~~~~~~~~d~~~~~~~~~~~~Rl 426 (1351)
T KOG1035|consen 386 SQGEDISEKS------AVPV---------------------------------SLLDVLSTSELLDALPKCLDEDSEERL 426 (1351)
T ss_pred hhcCcccccc------cchh---------------------------------hhhccccchhhhhhhhhhcchhhhhcc
Confidence 8875432110 0000 0011111 2678899999999999999
Q ss_pred CHHHHHhCcccCCC
Q 011763 406 TASAALASEYFSTK 419 (478)
Q Consensus 406 ta~e~L~hp~f~~~ 419 (478)
.+.++|.|+|.+..
T Consensus 427 ~~~~ll~~~f~~~~ 440 (1351)
T KOG1035|consen 427 SALELLTHPFLRFP 440 (1351)
T ss_pred chhhhhhchhcccc
Confidence 99999999998753
No 462
>PLN02876 acyl-CoA dehydrogenase
Probab=98.26 E-value=1.2e-05 Score=89.80 Aligned_cols=148 Identities=23% Similarity=0.380 Sum_probs=90.4
Q ss_pred eeeeeeecCceEEEEEEECCCC--cEEEEEEeecCCCChHHHHHHHHHHHHHHhcC-CCCe--eeecceeeecC-CceEE
Q 011763 134 KLEKIGQGTYSSVFRARDLDTG--KIVALKKVRFDNFEPESVRFMAREILILRRLD-HPNI--IKLEGLITSRL-SCSIY 207 (478)
Q Consensus 134 ~~~~LG~G~~g~V~~~~~~~~~--~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nI--v~l~~~~~~~~-~~~~~ 207 (478)
.++.|+.|.+..+|+......+ ..+++|+....... .....+.+|+.+|+.|. |.+| ++++.++.+.. .+..|
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~-~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~f 120 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLL-QSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAF 120 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccC-ccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCce
Confidence 3677899999999998764432 46788876543221 12345778999999995 6654 66666665421 23578
Q ss_pred EEEeeccCCchhhc------------------------cCCCC----------C--CCHHHHHHHHHH------------
Q 011763 208 LVFEYMEHDITGLL------------------------SCPDI----------K--FSEAQIKCYMNQ------------ 239 (478)
Q Consensus 208 lv~e~~~~~ll~~~------------------------~~~~~----------~--l~~~~~~~i~~q------------ 239 (478)
+||||++|..+... ..... + +...++..|..+
T Consensus 121 lVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~ 200 (822)
T PLN02876 121 YIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPR 200 (822)
T ss_pred EEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCC
Confidence 99999998532110 00000 0 111233222221
Q ss_pred ---HHHHHHHHHh-----------CCceeccCCCCcEEEecC-Cc-EEEeecccccccC
Q 011763 240 ---LLHGLEHCHS-----------RGVLHRDIKGSNLLVNNE-GV-LKLADFGLANFSN 282 (478)
Q Consensus 240 ---il~aL~~LH~-----------~givHrDlkp~NILl~~~-~~-vkl~DFG~a~~~~ 282 (478)
+...+.+|.. ..+||+|+++.|||++.+ +. +-|.||+++....
T Consensus 201 ~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~Gd 259 (822)
T PLN02876 201 NPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGN 259 (822)
T ss_pred ChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccCC
Confidence 2233556632 249999999999999853 33 5799999986543
No 463
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.24 E-value=9.9e-06 Score=77.11 Aligned_cols=74 Identities=15% Similarity=0.108 Sum_probs=48.6
Q ss_pred eeeecCc-eEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcC-CCCeeeecceeeecCCceEEEEEeecc
Q 011763 137 KIGQGTY-SSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLD-HPNIIKLEGLITSRLSCSIYLVFEYME 214 (478)
Q Consensus 137 ~LG~G~~-g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~lv~e~~~ 214 (478)
.|-.|.+ ..||++... +..++||+..... ...+.+|+.+++.+. +--+.+++++... .+..++|||+++
T Consensus 5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~--~~~~~lv~e~i~ 75 (244)
T cd05150 5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP-----TYELEREAERLRWLAGKLPVPEVIDYGSD--DGRAWLLTSAVP 75 (244)
T ss_pred ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc-----ccchHHHHHHHHHHHhcCCCCeEEEEEec--CCccEEEEEeeC
Confidence 3445555 679999743 4678889875332 234567999998883 4445566665544 345789999999
Q ss_pred CCchh
Q 011763 215 HDITG 219 (478)
Q Consensus 215 ~~ll~ 219 (478)
|..+.
T Consensus 76 G~~l~ 80 (244)
T cd05150 76 GVPAA 80 (244)
T ss_pred CccHh
Confidence 85443
No 464
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.18 E-value=5.2e-05 Score=69.06 Aligned_cols=130 Identities=28% Similarity=0.361 Sum_probs=90.8
Q ss_pred ccceeeeeeeeecCc-eEEEEEEECCCCcEEEEEEeec---CC-------CCh---------HHHHHHHHHHHHHHhcC-
Q 011763 129 ADAFEKLEKIGQGTY-SSVFRARDLDTGKIVALKKVRF---DN-------FEP---------ESVRFMAREILILRRLD- 187 (478)
Q Consensus 129 ~~~y~~~~~LG~G~~-g~V~~~~~~~~~~~vAlK~~~~---~~-------~~~---------~~~~~~~~E~~~l~~l~- 187 (478)
..+++.++.||.|.- |.||+++. .|+.||||++.. .. ... ....-+..|.+...+|+
T Consensus 36 ~~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke 113 (207)
T PF13095_consen 36 GDDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKE 113 (207)
T ss_pred CCcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHh
Confidence 368999999999999 99999985 678999999432 11 000 12234567888888774
Q ss_pred --CCCe--eeecceeeec----------------CCceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 011763 188 --HPNI--IKLEGLITSR----------------LSCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHC 247 (478)
Q Consensus 188 --h~nI--v~l~~~~~~~----------------~~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~L 247 (478)
+.++ |++++++.-. .....-||.||+.... .+... -+.+|+.-|..+
T Consensus 114 ~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~~----~~~~~~~dl~~~ 180 (207)
T PF13095_consen 114 AGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQIR----DIPQMLRDLKIL 180 (207)
T ss_pred ccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccchh----HHHHHHHHHHHH
Confidence 4455 8999887321 0112357777776533 22233 345677788889
Q ss_pred HhCCceeccCCCCcEEEecCCcEEEeecccc
Q 011763 248 HSRGVLHRDIKGSNLLVNNEGVLKLADFGLA 278 (478)
Q Consensus 248 H~~givHrDlkp~NILl~~~~~vkl~DFG~a 278 (478)
|..||+-+|+++.|.. .=||+|||.+
T Consensus 181 ~k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 181 HKLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHCCeeeccCcccccc-----CCEEEecccC
Confidence 9999999999999985 3478999864
No 465
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.15 E-value=8.1e-06 Score=72.03 Aligned_cols=130 Identities=21% Similarity=0.229 Sum_probs=88.6
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCee-eecceeeecCCceEEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNII-KLEGLITSRLSCSIYLV 209 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv-~l~~~~~~~~~~~~~lv 209 (478)
.....+.|++|.+|.||++.+ .+..+|+|+-+.+ .....+..|+++|..+.-.++- +++.+-. .++.
T Consensus 23 ~~~v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~d----s~r~~l~kEakiLeil~g~~~~p~vy~yg~------~~i~ 90 (201)
T COG2112 23 ELRVEKELAKGTTSVVYLGEW--RGGEVALKVRRRD----SPRRNLEKEAKILEILAGEGVTPEVYFYGE------DFIR 90 (201)
T ss_pred hhhhhhhhhcccccEEEEeec--cCceEEEEEecCC----cchhhHHHHHHHHHHhhhcCCCceEEEech------hhhh
Confidence 345667899999999999986 4568999987654 3345677899999998765553 3433221 3466
Q ss_pred EeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCC-CCcEEEecCCcEEEeeccccc
Q 011763 210 FEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIK-GSNLLVNNEGVLKLADFGLAN 279 (478)
Q Consensus 210 ~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlk-p~NILl~~~~~vkl~DFG~a~ 279 (478)
|||+.|..+....... + ++-+..+++.---|-..||-|..|. |..++|..++.+.|+||..|+
T Consensus 91 me~i~G~~L~~~~~~~---~----rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At 154 (201)
T COG2112 91 MEYIDGRPLGKLEIGG---D----RKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSAT 154 (201)
T ss_pred hhhhcCcchhhhhhcc---c----HHHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchh
Confidence 9999985444432211 2 2233345555555667799999986 555555556699999999986
No 466
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.08 E-value=2.7e-05 Score=73.75 Aligned_cols=29 Identities=31% Similarity=0.456 Sum_probs=25.1
Q ss_pred CceeccCCCCcEEEecCCcEEEeeccccc
Q 011763 251 GVLHRDIKGSNLLVNNEGVLKLADFGLAN 279 (478)
Q Consensus 251 givHrDlkp~NILl~~~~~vkl~DFG~a~ 279 (478)
.++|+|+.+.|||+++++..-|+||+.+.
T Consensus 165 ~l~HGD~~~~Nvlv~~~~i~giIDw~~a~ 193 (235)
T cd05155 165 VWFHGDLAPGNLLVQDGRLSAVIDFGCLG 193 (235)
T ss_pred eEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence 48999999999999876656799999874
No 467
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.94 E-value=1.4e-05 Score=76.98 Aligned_cols=139 Identities=17% Similarity=0.190 Sum_probs=95.3
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCC--------------------hHHHHHHHHHHHHHHhcC-CC
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFE--------------------PESVRFMAREILILRRLD-HP 189 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~--------------------~~~~~~~~~E~~~l~~l~-h~ 189 (478)
-+.+.++||-|.-+.||.+-+ ..|+..++|+-++.... .-+.-...+|...|+.|. |-
T Consensus 93 v~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g 171 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG 171 (465)
T ss_pred hhhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence 477889999999999999986 45888999964332110 111122346888898883 43
Q ss_pred C-eeeecceeeecCCceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCC
Q 011763 190 N-IIKLEGLITSRLSCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG 268 (478)
Q Consensus 190 n-Iv~l~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~ 268 (478)
+ +++.++ .+..|+|||++.+-.+.....-. .+..+...|+.-+--|-.+|+||+|+.--||+|++++
T Consensus 172 fpVPkpiD------~~RH~Vvmelv~g~Pl~~v~~v~------d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~ 239 (465)
T KOG2268|consen 172 FPVPKPID------HNRHCVVMELVDGYPLRQVRHVE------DPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDD 239 (465)
T ss_pred CCCCCccc------ccceeeHHHhhcccceeeeeecC------ChHHHHHHHHHHHHHHHHcCceecccchheeEEecCC
Confidence 3 334444 24568999999985444333211 1233444555556677789999999999999999999
Q ss_pred cEEEeecccccccC
Q 011763 269 VLKLADFGLANFSN 282 (478)
Q Consensus 269 ~vkl~DFG~a~~~~ 282 (478)
.++++||-......
T Consensus 240 ~i~vIDFPQmvS~s 253 (465)
T KOG2268|consen 240 KIVVIDFPQMVSTS 253 (465)
T ss_pred CEEEeechHhhccC
Confidence 99999998775443
No 468
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.91 E-value=0.00015 Score=68.48 Aligned_cols=74 Identities=14% Similarity=0.166 Sum_probs=45.9
Q ss_pred eeeeeecCceEEEEEEECC-CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCC-CCeeeecceeeecCCceEEEEEee
Q 011763 135 LEKIGQGTYSSVFRARDLD-TGKIVALKKVRFDNFEPESVRFMAREILILRRLDH-PNIIKLEGLITSRLSCSIYLVFEY 212 (478)
Q Consensus 135 ~~~LG~G~~g~V~~~~~~~-~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~~~~~~~~~~lv~e~ 212 (478)
++.|..|-...||++.... .+..|++|+...... ..-...+|+.+++.+.. .-.++++..+. . .+||||
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~---~~~d~~~E~~~~~~l~~~gl~P~v~~~~~---~---~~l~e~ 73 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE---LIIDRERELRIHKLLSKHGLAPKLYATFQ---N---GLIYEF 73 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc---ceecHHHHHHHHHHHHhCCCCCeEEEEeC---C---cEEEEe
Confidence 4567778888999997532 356788997653221 11122468888888843 33444443322 1 379999
Q ss_pred ccCCc
Q 011763 213 MEHDI 217 (478)
Q Consensus 213 ~~~~l 217 (478)
++|..
T Consensus 74 i~G~~ 78 (235)
T cd05157 74 IPGRT 78 (235)
T ss_pred eCCCc
Confidence 98843
No 469
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.89 E-value=0.00023 Score=65.27 Aligned_cols=130 Identities=18% Similarity=0.219 Sum_probs=87.4
Q ss_pred eeeeeecCceEEEEEEECCCCcEEEEEEeecCC--------------CChHHHHHHHHHHHHHHhcC------CCCeeee
Q 011763 135 LEKIGQGTYSSVFRARDLDTGKIVALKKVRFDN--------------FEPESVRFMAREILILRRLD------HPNIIKL 194 (478)
Q Consensus 135 ~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~--------------~~~~~~~~~~~E~~~l~~l~------h~nIv~l 194 (478)
...||.|+.-.||.-- .+....||++.... ..........+|+.....+. +.+|.++
T Consensus 6 ~~~i~~G~~R~cy~HP---~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 6 SDLIAQGGERDCYQHP---DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CcccccCCCceEEECC---CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 4578999999998753 34457899987655 11122445566776666665 7899999
Q ss_pred cceeeecCCceEEEEEeeccC---C---chhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEecCC
Q 011763 195 EGLITSRLSCSIYLVFEYMEH---D---ITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG 268 (478)
Q Consensus 195 ~~~~~~~~~~~~~lv~e~~~~---~---ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~ 268 (478)
+|+.+. ....-+|+|.+.. . .+..+... ..+++ .+.. .|-.-..||-+++|+.+||+|.||++....
T Consensus 83 ~G~veT--~~G~Glv~e~I~d~dG~~s~TL~~~l~~-~~~~~-~~~~---~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~ 155 (199)
T PF10707_consen 83 YGFVET--NLGLGLVVELIRDADGNISPTLEDYLKE-GGLTE-ELRQ---ALDEFKRYLLDHHIVIRDLNPHNIVVQRRD 155 (199)
T ss_pred eEEEec--CCceEEEEEEEECCCCCcCccHHHHHHc-CCccH-HHHH---HHHHHHHHHHHcCCeecCCCcccEEEEecC
Confidence 999987 4557888888753 1 23333322 23444 3333 344456788899999999999999997543
Q ss_pred ----cEEEee
Q 011763 269 ----VLKLAD 274 (478)
Q Consensus 269 ----~vkl~D 274 (478)
.+.|+|
T Consensus 156 ~~~~~lvlID 165 (199)
T PF10707_consen 156 SGEFRLVLID 165 (199)
T ss_pred CCceEEEEEe
Confidence 477777
No 470
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.83 E-value=8.7e-05 Score=67.64 Aligned_cols=98 Identities=26% Similarity=0.186 Sum_probs=76.5
Q ss_pred HHHHHHHhcCC-CCeeeecceeeecCCceEEEEEeeccCCchh-hc--cCCCCCCCHHHHHHHHHHHHHHHHHHHhC---
Q 011763 178 REILILRRLDH-PNIIKLEGLITSRLSCSIYLVFEYMEHDITG-LL--SCPDIKFSEAQIKCYMNQLLHGLEHCHSR--- 250 (478)
Q Consensus 178 ~E~~~l~~l~h-~nIv~l~~~~~~~~~~~~~lv~e~~~~~ll~-~~--~~~~~~l~~~~~~~i~~qil~aL~~LH~~--- 250 (478)
.|.-+|+.+.+ +++++++|+|- .++|.||.+.+.+. .. ...-...++..+..|+.+++..+.+|+..
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG------~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~ 81 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCG------RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLG 81 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECC------CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 48888999965 69999999873 25788999864221 10 01112358999999999999999999973
Q ss_pred CceeccCCCCcEEEecCCcEEEeeccccccc
Q 011763 251 GVLHRDIKGSNLLVNNEGVLKLADFGLANFS 281 (478)
Q Consensus 251 givHrDlkp~NILl~~~~~vkl~DFG~a~~~ 281 (478)
.+.-.|++++|+-|++++++|++|...+...
T Consensus 82 ~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 82 FFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred cEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 4777899999999999999999999987543
No 471
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.78 E-value=0.00033 Score=68.77 Aligned_cols=143 Identities=21% Similarity=0.267 Sum_probs=98.3
Q ss_pred eeeeeeeecCceEEEEEEECCCCcEEEEEEeecCC----------------------CChHHHH--HHHHHHHHHHhcCC
Q 011763 133 EKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDN----------------------FEPESVR--FMAREILILRRLDH 188 (478)
Q Consensus 133 ~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~----------------------~~~~~~~--~~~~E~~~l~~l~h 188 (478)
.+-.+|..|.-+.||.+.. .+|..+|||+++... -++...- ....|++-|.+|+.
T Consensus 147 ~inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~ 225 (520)
T KOG2270|consen 147 EINGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN 225 (520)
T ss_pred ecccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh
Confidence 3446678888999999984 568889999875321 0111111 22358888888866
Q ss_pred CCeeeecceeeecCCceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCcEEEecC
Q 011763 189 PNIIKLEGLITSRLSCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHS-RGVLHRDIKGSNLLVNNE 267 (478)
Q Consensus 189 ~nIv~l~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~ 267 (478)
..|.----+. - ....|||+|++..-...-.-.+..++...+..+-.|++.-+.-|-+ +++||.||.--|+|+. +
T Consensus 226 aGIP~PePIl-L---k~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Lyh-d 300 (520)
T KOG2270|consen 226 AGIPCPEPIL-L---KNHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYH-D 300 (520)
T ss_pred cCCCCCCcee-e---ecceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEE-C
Confidence 5543221111 1 1246999999864333333344568888899999999988887765 5999999999999986 5
Q ss_pred CcEEEeeccccccc
Q 011763 268 GVLKLADFGLANFS 281 (478)
Q Consensus 268 ~~vkl~DFG~a~~~ 281 (478)
|.+.|+|.+.+...
T Consensus 301 G~lyiIDVSQSVE~ 314 (520)
T KOG2270|consen 301 GKLYIIDVSQSVEH 314 (520)
T ss_pred CEEEEEEccccccC
Confidence 79999999987533
No 472
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.71 E-value=0.00026 Score=73.93 Aligned_cols=142 Identities=21% Similarity=0.201 Sum_probs=84.5
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCCC-----------------------------hHHHHHH------HHHH
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFE-----------------------------PESVRFM------AREI 180 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~-----------------------------~~~~~~~------~~E~ 180 (478)
+.||.-+.+.|++|+.+. |+.||||+-+..-.. .+..+.+ .+|+
T Consensus 167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 678999999999999765 999999996532100 1111122 2233
Q ss_pred HHHHhc----CCCC---eeeecceeeecCCceEEEEEeeccCC---chhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Q 011763 181 LILRRL----DHPN---IIKLEGLITSRLSCSIYLVFEYMEHD---ITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSR 250 (478)
Q Consensus 181 ~~l~~l----~h~n---Iv~l~~~~~~~~~~~~~lv~e~~~~~---ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~ 250 (478)
+...+. .|-+ -|.+-.++.+- ...-.|+||||+|. .++.+... .++...+...+.++.. .-|-..
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~-st~RVLtME~~~G~~i~Dl~~i~~~--gi~~~~i~~~l~~~~~--~qIf~~ 320 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDL-STKRVLTMEYVDGIKINDLDAIDKR--GISPHDILNKLVEAYL--EQIFKT 320 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhc-CcceEEEEEecCCccCCCHHHHHHc--CCCHHHHHHHHHHHHH--HHHHhc
Confidence 333222 3444 11222233221 22457999999983 33333333 3455544443333221 222356
Q ss_pred CceeccCCCCcEEEec----CCcEEEeecccccccCC
Q 011763 251 GVLHRDIKGSNLLVNN----EGVLKLADFGLANFSNT 283 (478)
Q Consensus 251 givHrDlkp~NILl~~----~~~vkl~DFG~a~~~~~ 283 (478)
|++|.|=+|.||++.. ++.+.+-|||+......
T Consensus 321 GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 321 GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred CCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 8999999999999994 56899999999865543
No 473
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.71 E-value=0.00064 Score=69.05 Aligned_cols=77 Identities=23% Similarity=0.179 Sum_probs=52.4
Q ss_pred eeeeeecCceEEEEEEECCCCcEEEEEEeecCCC---C--hHHHHHHHHHHHHHHhcC---CCCeeeecceeeecCCceE
Q 011763 135 LEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF---E--PESVRFMAREILILRRLD---HPNIIKLEGLITSRLSCSI 206 (478)
Q Consensus 135 ~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~---~--~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~~~~ 206 (478)
.+.||.|.+..||++.+...++.|+||.-..... . +...++...|.+.|+.+. -.++++++.+. ....
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D----~~~~ 106 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD----EELA 106 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC----CCCC
Confidence 5789999999999999864445899998531100 0 123455667888888862 24577776553 2346
Q ss_pred EEEEeeccC
Q 011763 207 YLVFEYMEH 215 (478)
Q Consensus 207 ~lv~e~~~~ 215 (478)
++|||++++
T Consensus 107 ~lVME~L~~ 115 (401)
T PRK09550 107 VTVMEDLSD 115 (401)
T ss_pred EEEEecCCC
Confidence 799999876
No 474
>PRK10593 hypothetical protein; Provisional
Probab=97.69 E-value=0.00065 Score=66.70 Aligned_cols=80 Identities=16% Similarity=0.167 Sum_probs=54.8
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCC---CCeeeecceeeec-CCceE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDH---PNIIKLEGLITSR-LSCSI 206 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~nIv~l~~~~~~~-~~~~~ 206 (478)
...-.+.||.|..+.||...... + .+++|..+. . .....+..|...|+.|.. -.++++++++... ..+..
T Consensus 15 ~~~~~~~i~~G~~~~vy~~~~~~-~-~~~~k~~~~-~---~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~ 88 (297)
T PRK10593 15 KLSRVECISEQPYAALWALYDSQ-G-NPMPLMARS-F---STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPD 88 (297)
T ss_pred hhheeeecCCccceeEEEEEcCC-C-CEEEEEecc-c---ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCe
Confidence 34556789999999999996422 3 467777432 1 122467789999998843 3677777766432 13457
Q ss_pred EEEEeeccCC
Q 011763 207 YLVFEYMEHD 216 (478)
Q Consensus 207 ~lv~e~~~~~ 216 (478)
+||||++++.
T Consensus 89 ~LVmE~i~G~ 98 (297)
T PRK10593 89 VLLLERLRGV 98 (297)
T ss_pred EEEEeccCCE
Confidence 9999999874
No 475
>PRK05231 homoserine kinase; Provisional
Probab=97.66 E-value=0.00088 Score=66.43 Aligned_cols=30 Identities=33% Similarity=0.550 Sum_probs=26.0
Q ss_pred CCceeccCCCCcEEEecCCcEEEeeccccc
Q 011763 250 RGVLHRDIKGSNLLVNNEGVLKLADFGLAN 279 (478)
Q Consensus 250 ~givHrDlkp~NILl~~~~~vkl~DFG~a~ 279 (478)
.++||+|+.|.|||++.+...-|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 187 RGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred cccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 379999999999999976556899999874
No 476
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.66 E-value=0.0002 Score=68.64 Aligned_cols=133 Identities=24% Similarity=0.240 Sum_probs=74.5
Q ss_pred eeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCe-eeecceeeecCCceEEEEEeeccCC
Q 011763 138 IGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNI-IKLEGLITSRLSCSIYLVFEYMEHD 216 (478)
Q Consensus 138 LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~~~lv~e~~~~~ 216 (478)
+..|-...+|+.. .++..+++|+........ . -...+|..+++.+....+ .+++... . -++||||++|.
T Consensus 4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~-~-~~r~~E~~~l~~l~~~g~~P~~i~~~----~--~~~v~e~i~G~ 73 (256)
T TIGR02721 4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKAL-G-VDRQREYQILQALSALGLAPKPILVN----E--HWLLVEWLEGE 73 (256)
T ss_pred CCCcCcCCeEEEE--eCCccEEEeeCCcccccc-c-CcHHHHHHHHHHHHhcCCCCceEEEe----C--CEEEEEeccCc
Confidence 4457778899887 356678888754321110 0 123568899998854333 3333322 1 25899999985
Q ss_pred chhhc------------------cC---CCCCCCH-HHHHHHHHHH---------HHHHHHHHh--------CCceeccC
Q 011763 217 ITGLL------------------SC---PDIKFSE-AQIKCYMNQL---------LHGLEHCHS--------RGVLHRDI 257 (478)
Q Consensus 217 ll~~~------------------~~---~~~~l~~-~~~~~i~~qi---------l~aL~~LH~--------~givHrDl 257 (478)
.+... .. ...+++. ..+..+..++ ...+..+-. ..++|+|+
T Consensus 74 ~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl 153 (256)
T TIGR02721 74 VITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDV 153 (256)
T ss_pred ccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCC
Confidence 43211 00 0111111 1222222122 111222211 24899999
Q ss_pred CCCcEEEecCCcEEEeeccccccc
Q 011763 258 KGSNLLVNNEGVLKLADFGLANFS 281 (478)
Q Consensus 258 kp~NILl~~~~~vkl~DFG~a~~~ 281 (478)
.|.|||+++++ +.|+||..+...
T Consensus 154 ~~~Nil~~~~~-~~lIDwE~a~~g 176 (256)
T TIGR02721 154 HAYNLVVTPQG-LKLIDWEYASDG 176 (256)
T ss_pred CcCcEEEeCCC-CEEEeccccCcC
Confidence 99999999877 789999988543
No 477
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.64 E-value=0.00071 Score=66.79 Aligned_cols=143 Identities=19% Similarity=0.182 Sum_probs=81.5
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCC--eeeeccee----eecCCc
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPN--IIKLEGLI----TSRLSC 204 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~----~~~~~~ 204 (478)
....++.++.|....+|++.. .++ .+++|+..... . ...+..|+.++..|.... +++++... .....+
T Consensus 23 ~~~~i~~~~~G~~n~~y~v~t-~~~-~~vLK~~~~~~-~---~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g 96 (307)
T TIGR00938 23 ELLSLKGIAEGVENSNYLLTT-DVG-RYILTLYEKRV-K---AEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAG 96 (307)
T ss_pred CceeccccCCccccceEEEEe-CCC-cEEEEEecCCC-C---HHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCC
Confidence 344567778887789999864 334 57889875421 1 233456777777774222 33433211 111134
Q ss_pred eEEEEEeeccCCchhh---------------ccC--CCC--C----CCHHH-----HH----------HHHHHHHHHHHH
Q 011763 205 SIYLVFEYMEHDITGL---------------LSC--PDI--K----FSEAQ-----IK----------CYMNQLLHGLEH 246 (478)
Q Consensus 205 ~~~lv~e~~~~~ll~~---------------~~~--~~~--~----l~~~~-----~~----------~i~~qil~aL~~ 246 (478)
..+++++|++|..... +.. ... . ..... .. .....+...+++
T Consensus 97 ~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~ 176 (307)
T TIGR00938 97 KPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDY 176 (307)
T ss_pred eEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHH
Confidence 5789999998843210 000 000 0 00000 00 001122334555
Q ss_pred HHh-------CCceeccCCCCcEEEecCCcEEEeeccccc
Q 011763 247 CHS-------RGVLHRDIKGSNLLVNNEGVLKLADFGLAN 279 (478)
Q Consensus 247 LH~-------~givHrDlkp~NILl~~~~~vkl~DFG~a~ 279 (478)
+.. .++||+|+.+.||+++.++.+.|+||+.+.
T Consensus 177 l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 177 LDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred HHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 542 579999999999999998877899999874
No 478
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.60 E-value=1e-05 Score=90.93 Aligned_cols=164 Identities=12% Similarity=-0.013 Sum_probs=115.0
Q ss_pred ChHHHHHHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeeccCCchh-hccC---CCCCCCHHHHHHHHHHHHHHH
Q 011763 169 EPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHDITG-LLSC---PDIKFSEAQIKCYMNQLLHGL 244 (478)
Q Consensus 169 ~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~~~ll~-~~~~---~~~~l~~~~~~~i~~qil~aL 244 (478)
.+...+....|...++...|+++.....-.........|..++|+.++.+. .+.. ...++.+.-+.....+.+.+.
T Consensus 1269 sePlkemll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~ 1348 (2724)
T KOG1826|consen 1269 SEPLKEMLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNR 1348 (2724)
T ss_pred hhHHHHhhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhcc
Confidence 334445555676777777899988776655544455568899999865443 3332 222334444444444547777
Q ss_pred HHHHhC-----CceeccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHH
Q 011763 245 EHCHSR-----GVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSV 319 (478)
Q Consensus 245 ~~LH~~-----givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~Diwsl 319 (478)
.-+|.. -.+|++||+.|.+|..+.++|+.++|+.+.-.+. .......++++.|+.|++... ..++.++|+|..
T Consensus 1349 ~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~-~sf~Gl~l~sp~~v~qli~N~-ik~t~rsdilr~ 1426 (2724)
T KOG1826|consen 1349 NVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPV-LSFFGLELCSPIYVLQLIKNE-IKFTKRSDILRR 1426 (2724)
T ss_pred chhhhcccCCccchhhhhhhhccceecCCcccccccccccccCch-HhhhhhhhCCHHHHHHHHHHH-HhhhhHHHHHHH
Confidence 777754 2799999999999999999999999999843322 223344566888999996654 677888999999
Q ss_pred HHHHHHHHhCCCCCC
Q 011763 320 GCVFAELLIGKPILQ 334 (478)
Q Consensus 320 G~il~elltG~~pf~ 334 (478)
++.+|++.-|.++|.
T Consensus 1427 s~~ly~rs~~n~~fi 1441 (2724)
T KOG1826|consen 1427 SLSLYLRSDGNAYFI 1441 (2724)
T ss_pred HHHHHHHhcccHHHH
Confidence 999999999887775
No 479
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.60 E-value=0.00053 Score=67.15 Aligned_cols=140 Identities=16% Similarity=0.121 Sum_probs=81.9
Q ss_pred eeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCC--eeeeccee----eecCCceE
Q 011763 133 EKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPN--IIKLEGLI----TSRLSCSI 206 (478)
Q Consensus 133 ~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~----~~~~~~~~ 206 (478)
.-++.|..|....+|+... .+..+++|+... .....+..|+.++..|.+.. +++++... .....+..
T Consensus 17 ~~i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~-----~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~ 89 (296)
T cd05153 17 LSFEGISAGIENTNYFVTT--DSGRYVLTLFEK-----VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKP 89 (296)
T ss_pred hheecccCccccceEEEEe--CCCcEEEEEcCC-----CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCce
Confidence 3466777788889999864 334688998753 12244667888888884322 44443311 11113456
Q ss_pred EEEEeeccCCchhhcc---------------C--CC--C------CCCHHHH--H--------HHHHHHHHHHHHHHh--
Q 011763 207 YLVFEYMEHDITGLLS---------------C--PD--I------KFSEAQI--K--------CYMNQLLHGLEHCHS-- 249 (478)
Q Consensus 207 ~lv~e~~~~~ll~~~~---------------~--~~--~------~l~~~~~--~--------~i~~qil~aL~~LH~-- 249 (478)
++|+++++|..+.... . .. . ...+... . .....+..++.++.+
T Consensus 90 ~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~ 169 (296)
T cd05153 90 AALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFD 169 (296)
T ss_pred EEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhh
Confidence 8999999985432210 0 00 0 0000000 0 011112334444443
Q ss_pred -----CCceeccCCCCcEEEecCCcEEEeeccccc
Q 011763 250 -----RGVLHRDIKGSNLLVNNEGVLKLADFGLAN 279 (478)
Q Consensus 250 -----~givHrDlkp~NILl~~~~~vkl~DFG~a~ 279 (478)
.++||+|+.|.|||+++++.+.|+||+.+.
T Consensus 170 ~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 170 PSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred hhcCCCcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence 379999999999999988778899999874
No 480
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.58 E-value=0.00051 Score=67.52 Aligned_cols=74 Identities=23% Similarity=0.268 Sum_probs=45.3
Q ss_pred eeeeeecCceEEEEEEECC------CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCC-eeeecceeeecCCceEE
Q 011763 135 LEKIGQGTYSSVFRARDLD------TGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPN-IIKLEGLITSRLSCSIY 207 (478)
Q Consensus 135 ~~~LG~G~~g~V~~~~~~~------~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~~~~~~ 207 (478)
++.|..|-...||++.... .++.|++|+..... .......+|+.++..+.... ..+++.++.. .
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~---~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~------~ 73 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV---ELLIDRERELVVFARLSERNLGPKLYGIFPN------G 73 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC---cceechHHHHHHHHHHHhCCCCCceEEEeCC------C
Confidence 3556667777899987533 25789999965432 12233457888888884322 3445444422 2
Q ss_pred EEEeeccCCc
Q 011763 208 LVFEYMEHDI 217 (478)
Q Consensus 208 lv~e~~~~~l 217 (478)
+|+||++|..
T Consensus 74 ~v~e~i~G~~ 83 (302)
T cd05156 74 RIEEFIPSRT 83 (302)
T ss_pred chhheeCCCc
Confidence 5899988743
No 481
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.53 E-value=0.0015 Score=64.09 Aligned_cols=150 Identities=18% Similarity=0.220 Sum_probs=86.1
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCC--CCeeeecceeeecCCceEEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDH--PNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~nIv~l~~~~~~~~~~~~~l 208 (478)
...+++.+-.|..-.+|...+. ++.++|+ ...............+|+.+|+.+.- .-+...++++.+..-...|.
T Consensus 26 ~~~~v~~~~~G~sn~t~~~~~~--~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~ 102 (321)
T COG3173 26 GLLIVEEISGGWSNDTFRLGDT--GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFY 102 (321)
T ss_pred CCceeeeccCCcccceEEEecC--CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceE
Confidence 4455555544444456666543 7888888 43222234555667789999988843 23344455665532245689
Q ss_pred EEeeccCCchhhccCCC--------------------------------CCCCHHHHHHHHHHH--------------HH
Q 011763 209 VFEYMEHDITGLLSCPD--------------------------------IKFSEAQIKCYMNQL--------------LH 242 (478)
Q Consensus 209 v~e~~~~~ll~~~~~~~--------------------------------~~l~~~~~~~i~~qi--------------l~ 242 (478)
||+|++|.......... ..+...++..+..+. ..
T Consensus 103 v~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~ 182 (321)
T COG3173 103 VMEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADR 182 (321)
T ss_pred EEEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHH
Confidence 99999983211110000 000111111111111 12
Q ss_pred HHHHHHhC--------CceeccCCCCcEEEecCCcEEEeecccccccCC
Q 011763 243 GLEHCHSR--------GVLHRDIKGSNLLVNNEGVLKLADFGLANFSNT 283 (478)
Q Consensus 243 aL~~LH~~--------givHrDlkp~NILl~~~~~vkl~DFG~a~~~~~ 283 (478)
-..||+.+ .++|+|+.+.||+|++++.+-|+||+++....+
T Consensus 183 ~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP 231 (321)
T COG3173 183 LIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGDP 231 (321)
T ss_pred HHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccCCc
Confidence 23344432 489999999999999999999999999976543
No 482
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.32 E-value=0.0037 Score=60.66 Aligned_cols=31 Identities=19% Similarity=0.394 Sum_probs=25.8
Q ss_pred CceeccCCCCcEEEecCCc-EEEeeccccccc
Q 011763 251 GVLHRDIKGSNLLVNNEGV-LKLADFGLANFS 281 (478)
Q Consensus 251 givHrDlkp~NILl~~~~~-vkl~DFG~a~~~ 281 (478)
.++|+|++|.|||+++++. .-|+||+.+...
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG 217 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKVG 217 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence 4899999999999997565 469999988543
No 483
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.29 E-value=0.00049 Score=70.30 Aligned_cols=172 Identities=22% Similarity=0.357 Sum_probs=110.3
Q ss_pred HHHHHHHHHHhcCCCCeeeecceeeecCCceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcee
Q 011763 175 FMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSRGVLH 254 (478)
Q Consensus 175 ~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH 254 (478)
.+.-...+++.+.|+|+...+++-... .....+|||+++-++.+...... +-.. +++ .+++.|
T Consensus 28 ~ilgr~~~lktl~~~~l~~yl~~~r~~-~~r~IVV~e~~~~Sled~~~~~~--l~~~-------s~~-------~~~~~~ 90 (725)
T KOG1093|consen 28 QILGRFQYLKSLQHDNLCQYLDFSRGK-HERVIVVMEHYTMSLEDILKTGN--LKDE-------SLL-------AHGVLH 90 (725)
T ss_pred HHhhhhHHHHhhcCccceeeEeeecCc-cceEEEEehhhccchHHHHHhcc--cchh-------hhc-------ccccce
Confidence 345578889999999999988876543 34588999999877666544332 1100 111 122222
Q ss_pred ccCCCCcEEEecCCcEEEeecccccccCCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCCCCCC
Q 011763 255 RDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQ 334 (478)
Q Consensus 255 rDlkp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~~pf~ 334 (478)
- || ++++| -++ |. | | ....+++|||++|.++.++.-|...+.
T Consensus 91 ~-----~~-------~~~td-~~~----------------t~-~--~------~~~~pKsdVwsl~~i~~el~L~~~l~~ 132 (725)
T KOG1093|consen 91 L-----NI-------IYITD-HFL----------------TK-Y--P------SPIGPKSDVWSLGFIILELYLGISLEA 132 (725)
T ss_pred e-----hh-------hhccc-ccc----------------cc-C--C------CCCCcchhhhhHHHHHHHHHHhhHHHH
Confidence 2 22 22233 000 00 1 1 112259999999999999999999999
Q ss_pred CCChHHHHHHHHHHcCCCCchhhccCCCCCccccCCCCCCCccch-hcccCCchhHHHHHHHhcCCCCCCccCHHHHHhC
Q 011763 335 GRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLR-ETFKDLPTTAVNLIETLLSVEPYKRATASAALAS 413 (478)
Q Consensus 335 ~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~l~~Li~~mL~~dP~~R~ta~e~L~h 413 (478)
...+.+++..+......+.... ....+ ...-..+..+.+++..|+...|..||...++.++
T Consensus 133 ~~~~s~~l~~i~k~~~~d~~~~------------------~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~ 194 (725)
T KOG1093|consen 133 ELTESEYLEILLKYYTDDQELL------------------STAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKR 194 (725)
T ss_pred HHHHHHHHHHHHHhccCchhHH------------------HHHHHHHHHHhhhHhHHHHhccCCccccccccchhHHhcC
Confidence 8888888877766433222110 00000 1113567778999999999999999999999999
Q ss_pred cccCCC
Q 011763 414 EYFSTK 419 (478)
Q Consensus 414 p~f~~~ 419 (478)
+-|.+.
T Consensus 195 ~i~~ev 200 (725)
T KOG1093|consen 195 CSFTEV 200 (725)
T ss_pred ccHHHH
Confidence 999753
No 484
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=97.28 E-value=0.003 Score=63.03 Aligned_cols=147 Identities=18% Similarity=0.250 Sum_probs=81.1
Q ss_pred CcccccccceeeeeeeeecCceEEEEEEECCC---CcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCe-eeeccee
Q 011763 123 GWVPLRADAFEKLEKIGQGTYSSVFRARDLDT---GKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNI-IKLEGLI 198 (478)
Q Consensus 123 ~~~~~~~~~y~~~~~LG~G~~g~V~~~~~~~~---~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~ 198 (478)
+|..+..+.+++....| |-.-.+|++..... +..|++|+..... . ..-.-.+|..+++.+..-++ +++++++
T Consensus 8 ~w~~~~~~~i~i~~l~g-GlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t--~-~~IdR~~E~~il~~l~~~gl~P~~l~~~ 83 (330)
T PLN02421 8 GWSDLDDSDFSVERISG-GITNLLLKVSVKEENGNEVSVTVRLFGPNT--D-YVIDRERELQAIKYLSAAGFGAKLLGVF 83 (330)
T ss_pred ccccCCcCceEEEEeCC-cccceEEEEEecCCCCCCceEEEEEecCCc--C-eEechHHHHHHHHHHHhcCCCCceeEEe
Confidence 34333344555555544 77778999875432 3378999875322 1 11112468888888854444 4555544
Q ss_pred eecCCceEEEEEeeccCCchhhc------------------cCCCC-----CCCHHHHHHHHHHH---------------
Q 011763 199 TSRLSCSIYLVFEYMEHDITGLL------------------SCPDI-----KFSEAQIKCYMNQL--------------- 240 (478)
Q Consensus 199 ~~~~~~~~~lv~e~~~~~ll~~~------------------~~~~~-----~l~~~~~~~i~~qi--------------- 240 (478)
.. + +|.+|+++..+... ..... +-....+..+..++
T Consensus 84 ~~--G----~i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~ 157 (330)
T PLN02421 84 GN--G----MIQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYE 157 (330)
T ss_pred CC--c----EeehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhc
Confidence 22 2 58889877433210 01110 11123333333222
Q ss_pred -------HHHHHH----HHhCC----ceeccCCCCcEEEec-CCcEEEeeccccc
Q 011763 241 -------LHGLEH----CHSRG----VLHRDIKGSNLLVNN-EGVLKLADFGLAN 279 (478)
Q Consensus 241 -------l~aL~~----LH~~g----ivHrDlkp~NILl~~-~~~vkl~DFG~a~ 279 (478)
..-+.. +...+ ++|+|+.+.|||+++ ++.++|+||..|.
T Consensus 158 ~~~~~~l~~~~~~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag 212 (330)
T PLN02421 158 TISFEELRDEIVELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGS 212 (330)
T ss_pred ccCHHHHHHHHHHHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccC
Confidence 111111 11112 799999999999985 4789999999874
No 485
>PLN02236 choline kinase
Probab=97.14 E-value=0.0055 Score=61.47 Aligned_cols=140 Identities=13% Similarity=0.189 Sum_probs=79.7
Q ss_pred ceeeeeeeeecCceEEEEEEECC----CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCCe-eeecceeeecCCce
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLD----TGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNI-IKLEGLITSRLSCS 205 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~----~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~ 205 (478)
... +..|-.|-.-.+|++.... .++.|++|+..... ..... ..+|+.+++.+..-++ .++++.+.. +
T Consensus 38 ~~~-i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t--~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~--g-- 109 (344)
T PLN02236 38 ALQ-VIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV--ELFFD-RDDEIRTFECMSRHGQGPRLLGRFPN--G-- 109 (344)
T ss_pred cEE-EEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC--Ceeec-hHHHHHHHHHHHHcCCCCceEEEECC--c--
Confidence 344 4455558888899987432 34689999875432 11111 2568999888853333 345554422 2
Q ss_pred EEEEEeeccCCchhhc------------------cCCC---C--CCCHHHHHHHHHHHH-----------------HHHH
Q 011763 206 IYLVFEYMEHDITGLL------------------SCPD---I--KFSEAQIKCYMNQLL-----------------HGLE 245 (478)
Q Consensus 206 ~~lv~e~~~~~ll~~~------------------~~~~---~--~l~~~~~~~i~~qil-----------------~aL~ 245 (478)
.|.+|+++..+... .... . ......+..++.++. ..+.
T Consensus 110 --~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~ 187 (344)
T PLN02236 110 --RVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEIN 187 (344)
T ss_pred --eEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHH
Confidence 58899887433211 0000 0 111233334332221 1111
Q ss_pred HH----H----hCCceeccCCCCcEEEec-CCcEEEeecccccc
Q 011763 246 HC----H----SRGVLHRDIKGSNLLVNN-EGVLKLADFGLANF 280 (478)
Q Consensus 246 ~L----H----~~givHrDlkp~NILl~~-~~~vkl~DFG~a~~ 280 (478)
.| . ...++|+|+++.|||+++ ++.+.|+||..+..
T Consensus 188 ~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 188 LLEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred HHHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 12 1 225899999999999986 46899999998853
No 486
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.78 E-value=0.0068 Score=60.44 Aligned_cols=74 Identities=19% Similarity=0.252 Sum_probs=46.8
Q ss_pred eeeecCceEEEEEEECCCCcEEEEEEeec------CCCChHHHHHHHHHHHHHHhcC--CC-CeeeecceeeecCCceEE
Q 011763 137 KIGQGTYSSVFRARDLDTGKIVALKKVRF------DNFEPESVRFMAREILILRRLD--HP-NIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 137 ~LG~G~~g~V~~~~~~~~~~~vAlK~~~~------~~~~~~~~~~~~~E~~~l~~l~--h~-nIv~l~~~~~~~~~~~~~ 207 (478)
.||.|....||++.+...++-|+||.-.. +.+ +-..++..-|..+|+... .| .+++++.+- .....
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~w-pl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D----~e~~~ 76 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESW-PLTLDRARIESSALIRQGEHVPHLVPRIFHFD----TEMAV 76 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCC-CCCccHHHHHHHHHHHhhccCccccCeEEEEc----cccce
Confidence 46889999999999754446799997431 111 222344556888887763 34 455564432 33456
Q ss_pred EEEeeccC
Q 011763 208 LVFEYMEH 215 (478)
Q Consensus 208 lv~e~~~~ 215 (478)
+|||+++.
T Consensus 77 ~vMEdL~~ 84 (370)
T TIGR01767 77 TVMEDLSH 84 (370)
T ss_pred ehHhhCcc
Confidence 89999864
No 487
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.76 E-value=0.027 Score=57.25 Aligned_cols=76 Identities=14% Similarity=0.141 Sum_probs=50.0
Q ss_pred eeeeeeecCceEEEEEEECCCCcEEEEEEeecCCC--C---hHHHHHHHHHHHHHHhcC---CCCeeeecceeeecCCce
Q 011763 134 KLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNF--E---PESVRFMAREILILRRLD---HPNIIKLEGLITSRLSCS 205 (478)
Q Consensus 134 ~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~--~---~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~~~ 205 (478)
..+.||.|....||+..+. +..|+||.-..... . +....+...|+..|+.+. -.++++++.++.+ .
T Consensus 36 ~~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded----~ 109 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRT----M 109 (418)
T ss_pred eEEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCC----C
Confidence 4678899999999999863 45688997542111 0 012344445677777663 2477788776653 3
Q ss_pred EEEEEeeccC
Q 011763 206 IYLVFEYMEH 215 (478)
Q Consensus 206 ~~lv~e~~~~ 215 (478)
.+++||++++
T Consensus 110 ~vlvME~L~~ 119 (418)
T PLN02756 110 ALIGMRYLEP 119 (418)
T ss_pred CEEEEeecCC
Confidence 5789999976
No 488
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=96.64 E-value=0.0079 Score=55.78 Aligned_cols=29 Identities=38% Similarity=0.647 Sum_probs=21.0
Q ss_pred CceeccCCCCcEEE-ecCCcEEEeeccccc
Q 011763 251 GVLHRDIKGSNLLV-NNEGVLKLADFGLAN 279 (478)
Q Consensus 251 givHrDlkp~NILl-~~~~~vkl~DFG~a~ 279 (478)
-++|+||.+.|||+ +.++.++|+||..|.
T Consensus 144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~ 173 (211)
T PF01633_consen 144 VFCHNDLNPGNILINNKDGEVKLIDFEYAG 173 (211)
T ss_dssp EEE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred eEeeccCccccEEeccCCCeEEEecHHHHh
Confidence 48999999999999 888999999999884
No 489
>PRK12396 5-methylribose kinase; Reviewed
Probab=96.55 E-value=0.012 Score=59.55 Aligned_cols=77 Identities=22% Similarity=0.154 Sum_probs=49.4
Q ss_pred eeeeeecCceEEEEEEECCCCcEEEEEEeec----CCCChHHHHHHHHHHHHHHhcC--CC-CeeeecceeeecCCceEE
Q 011763 135 LEKIGQGTYSSVFRARDLDTGKIVALKKVRF----DNFEPESVRFMAREILILRRLD--HP-NIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 135 ~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~----~~~~~~~~~~~~~E~~~l~~l~--h~-nIv~l~~~~~~~~~~~~~ 207 (478)
++.||.|.-.-||++.+...++-|+||.-.. ...=+-..++..-|..+|+.+. .| ++++++.+- .....
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~D----~e~~~ 109 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLFD----SVMNC 109 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEEC----cHHhh
Confidence 6788999999999999743356789997421 1100233455566888888773 34 456664432 23456
Q ss_pred EEEeeccC
Q 011763 208 LVFEYMEH 215 (478)
Q Consensus 208 lv~e~~~~ 215 (478)
+|||+++.
T Consensus 110 ~vMEdL~~ 117 (409)
T PRK12396 110 CVMEDLSD 117 (409)
T ss_pred HHHHhCcc
Confidence 88988864
No 490
>PTZ00384 choline kinase; Provisional
Probab=96.48 E-value=0.022 Score=57.85 Aligned_cols=86 Identities=20% Similarity=0.231 Sum_probs=47.5
Q ss_pred CcccccccceeeeeeeeecCceEEEEEEECCC-CcE-----EEEEEeecCCCChHHHHHHHHHHHHHHhcCCC-Ceeeec
Q 011763 123 GWVPLRADAFEKLEKIGQGTYSSVFRARDLDT-GKI-----VALKKVRFDNFEPESVRFMAREILILRRLDHP-NIIKLE 195 (478)
Q Consensus 123 ~~~~~~~~~y~~~~~LG~G~~g~V~~~~~~~~-~~~-----vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~-nIv~l~ 195 (478)
.|.....+.+++. .|..|-...+|++..... +.. |.+++.. ..... .-.-.+|+.+++.|... .-.+++
T Consensus 44 ~w~~~~~~~i~i~-~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g--~~~~l-~IdR~~E~~i~~~Ls~~glgP~l~ 119 (383)
T PTZ00384 44 FWNNVNPEFIEIK-KMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSS--TYNSL-VIDNDLQYNIAKLLGDNNFGPKII 119 (383)
T ss_pred ccccCCcccEEEE-EeCCcccceEEEEEecCCCCCccccceEEEEecc--CCCce-EeccHHHHHHHHHHHhCCCCCeEE
Confidence 4443334445554 454588889999975432 122 4444321 11111 11124689999999544 445566
Q ss_pred ceeeecCCceEEEEEeeccCCch
Q 011763 196 GLITSRLSCSIYLVFEYMEHDIT 218 (478)
Q Consensus 196 ~~~~~~~~~~~~lv~e~~~~~ll 218 (478)
+.+.. ++|.||++|..+
T Consensus 120 ~~f~~------g~l~efIeGr~l 136 (383)
T PTZ00384 120 GRFGD------FTIQEWVEGNTM 136 (383)
T ss_pred EecCC------EEEEEEeccccC
Confidence 65532 489999998543
No 491
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.35 E-value=0.032 Score=54.35 Aligned_cols=76 Identities=16% Similarity=0.196 Sum_probs=45.3
Q ss_pred eeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcC---CCCeeeecceeeecCCceEEE
Q 011763 132 FEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLD---HPNIIKLEGLITSRLSCSIYL 208 (478)
Q Consensus 132 y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~~~~~l 208 (478)
.+..+.|+.|....+|+.. .+++.+.||+-.. .....+..|..-|+.|. --.+++++.+... ....||
T Consensus 19 i~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~-----~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~--~~~~fL 89 (288)
T PF03881_consen 19 ITSIEPVSGGDINEAYRLD--TDGGSYFVKVNSE-----SGRDMFEGEAEGLKALAEANPIRVPKVIAWGEY--DDDAFL 89 (288)
T ss_dssp --EEEEE--SSSSEEEEEE--TTS-EEEEEEEEG-----GGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE---SSCCEE
T ss_pred eeeeEecCCCChhheEEEE--CCCccEEEEecCh-----hhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEee--cCCceE
Confidence 5556788999999999987 5778899998762 22345667888888883 3456677766554 334589
Q ss_pred EEeeccCC
Q 011763 209 VFEYMEHD 216 (478)
Q Consensus 209 v~e~~~~~ 216 (478)
||||++.+
T Consensus 90 lle~l~~~ 97 (288)
T PF03881_consen 90 LLEFLEMG 97 (288)
T ss_dssp EEE-----
T ss_pred EEEeecCC
Confidence 99998754
No 492
>PTZ00296 choline kinase; Provisional
Probab=96.33 E-value=0.042 Score=56.96 Aligned_cols=90 Identities=14% Similarity=0.193 Sum_probs=54.0
Q ss_pred ccccccCcccccccceeeeeeeeecCceEEEEEEECC--------CCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCC
Q 011763 117 AGEAIQGWVPLRADAFEKLEKIGQGTYSSVFRARDLD--------TGKIVALKKVRFDNFEPESVRFMAREILILRRLDH 188 (478)
Q Consensus 117 ~~~~~~~~~~~~~~~y~~~~~LG~G~~g~V~~~~~~~--------~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h 188 (478)
..+.+.+|..+..++. -++.|..|-.-.+|++.... .++.|.+|+.-... +..-.-.+|..+++.+..
T Consensus 93 ~~~~vp~W~~~~~~~I-~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~t---e~lIdR~~E~~v~~~ls~ 168 (442)
T PTZ00296 93 CLEKVPEWRRFTEDDV-RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDV---DELYNPISEFEVYKTMSK 168 (442)
T ss_pred HHHHCCccccCCcccE-EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCc---cceeCHHHHHHHHHHHHH
Confidence 3333455665555666 66677678888899997542 14678899874322 111123458888888754
Q ss_pred CCe-eeecceeeecCCceEEEEEeeccCC
Q 011763 189 PNI-IKLEGLITSRLSCSIYLVFEYMEHD 216 (478)
Q Consensus 189 ~nI-v~l~~~~~~~~~~~~~lv~e~~~~~ 216 (478)
.+| .++++.+.. +.|.||+++.
T Consensus 169 ~gi~P~l~~~f~g------g~I~efi~g~ 191 (442)
T PTZ00296 169 YRIAPQLLNTFSG------GRIEEWLYGD 191 (442)
T ss_pred CCCCCceEEEeCC------CEEEEeeCCc
Confidence 333 345554422 3578999875
No 493
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.20 E-value=0.032 Score=55.04 Aligned_cols=31 Identities=19% Similarity=0.256 Sum_probs=28.1
Q ss_pred CceeccCCCCcEEEecCCcEEEeeccccccc
Q 011763 251 GVLHRDIKGSNLLVNNEGVLKLADFGLANFS 281 (478)
Q Consensus 251 givHrDlkp~NILl~~~~~vkl~DFG~a~~~ 281 (478)
++||+|+.+.|||+++++.+-|+||..+...
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~d 227 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRGGYFINFEKASFA 227 (309)
T ss_pred eeeCCCCcHHhEEEcCCCCEEEEEhhhcccC
Confidence 6999999999999999999999999988543
No 494
>PRK06148 hypothetical protein; Provisional
Probab=96.14 E-value=0.056 Score=61.97 Aligned_cols=31 Identities=35% Similarity=0.549 Sum_probs=26.4
Q ss_pred CCceeccCCCCcEEEecCC--cEE-Eeecccccc
Q 011763 250 RGVLHRDIKGSNLLVNNEG--VLK-LADFGLANF 280 (478)
Q Consensus 250 ~givHrDlkp~NILl~~~~--~vk-l~DFG~a~~ 280 (478)
.++||+|+.+.|||++.++ .+. |+|||-+..
T Consensus 203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 203 AQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred cceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 4799999999999999875 555 999998854
No 495
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.91 E-value=0.16 Score=50.43 Aligned_cols=137 Identities=21% Similarity=0.290 Sum_probs=79.3
Q ss_pred eeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCCC------eeeecceeeecCC--ceEE
Q 011763 136 EKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPN------IIKLEGLITSRLS--CSIY 207 (478)
Q Consensus 136 ~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------Iv~l~~~~~~~~~--~~~~ 207 (478)
..|.+ .-..||+.... +|. ++||+.+.. .. ...+..|+..|+.|.-.. |..+-|-...... .+.+
T Consensus 32 ~~l~s-~eN~~f~~~~~-~g~-~iLki~~~~-~~---~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a 104 (331)
T COG2334 32 RGLNS-EENSNFRVQTE-DGR-YILKIYRPG-WT---RAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPA 104 (331)
T ss_pred ccccc-ccCceEEEEec-CCC-eEEEEecCC-CC---HHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeE
Confidence 34444 44568988753 344 499998754 22 344566888888883211 2333232222223 3788
Q ss_pred EEEeeccCCchhh-ccC-----------------CCC---------CCCHH----HH---------HHHHHHHHHHHHHH
Q 011763 208 LVFEYMEHDITGL-LSC-----------------PDI---------KFSEA----QI---------KCYMNQLLHGLEHC 247 (478)
Q Consensus 208 lv~e~~~~~ll~~-~~~-----------------~~~---------~l~~~----~~---------~~i~~qil~aL~~L 247 (478)
-+++|++|..+.. ... .+. ...+. .. .....++...++.+
T Consensus 105 ~lf~~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~ 184 (331)
T COG2334 105 ALFEYLPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRL 184 (331)
T ss_pred EEEEecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHH
Confidence 8999999865552 100 000 01111 00 11223444455555
Q ss_pred HhC--------C--ceeccCCCCcEEEecCCc-EEEeeccccc
Q 011763 248 HSR--------G--VLHRDIKGSNLLVNNEGV-LKLADFGLAN 279 (478)
Q Consensus 248 H~~--------g--ivHrDlkp~NILl~~~~~-vkl~DFG~a~ 279 (478)
.+. + +||+|+.|.||+++.+.. +.++||+-+.
T Consensus 185 ~~~~~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 185 LARLPAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred HhhchhhCCcccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence 532 3 999999999999999885 8999999874
No 496
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=95.83 E-value=0.044 Score=54.25 Aligned_cols=111 Identities=20% Similarity=0.285 Sum_probs=70.9
Q ss_pred CceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCcEEEecCCcEEEeeccccccc
Q 011763 203 SCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCHSR-GVLHRDIKGSNLLVNNEGVLKLADFGLANFS 281 (478)
Q Consensus 203 ~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~~~~vkl~DFG~a~~~ 281 (478)
..+.|++|++-...+... . .-...++..++.+.+..++-+..+ ..-|||+...||||+ +|+|.|+||-+++..
T Consensus 298 ~~y~yl~~kdhgt~is~i-k----~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl~ 371 (488)
T COG5072 298 TLYLYLHFKDHGTPISII-K----ADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRLS 371 (488)
T ss_pred ceEEEEEEecCCceeeee-e----cccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeecc
Confidence 556778888765543322 1 124677788888877766666654 689999999999999 999999999999843
Q ss_pred CCCCCCCccccccCCcccCcccccCCCCCCChhhHHHHHHHHHHHHhCC
Q 011763 282 NTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGK 330 (478)
Q Consensus 282 ~~~~~~~~~~~~~t~~y~APE~l~~~~~~~~~~DiwslG~il~elltG~ 330 (478)
.... .... ...--|-.+.| .-+.+-|||-+ |--|+.|.
T Consensus 372 ~~q~-~isy-----~rldhp~lF~G--~dd~QFeIYrl---Mr~l~~g~ 409 (488)
T COG5072 372 YSQG-IISY-----NRLDHPDLFNG--VDDYQFEIYRL---MRRLLKGR 409 (488)
T ss_pred cCCc-eeec-----cccCchhhhcC--ccceeeeHHHH---HHHHhcCc
Confidence 3221 1111 11223443444 23667788874 33444444
No 497
>PRK11768 serine/threonine protein kinase; Provisional
Probab=95.23 E-value=0.62 Score=46.32 Aligned_cols=72 Identities=15% Similarity=0.144 Sum_probs=41.6
Q ss_pred cCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCC--Ceeee---cceeeecCCceEEEEEeeccC
Q 011763 141 GTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHP--NIIKL---EGLITSRLSCSIYLVFEYMEH 215 (478)
Q Consensus 141 G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~--nIv~l---~~~~~~~~~~~~~lv~e~~~~ 215 (478)
+.-..||+... .++..+++|+.+.... ....+..|+.++..|... .++.. -+-.....++..+.++++++|
T Consensus 36 s~eN~vy~v~~-~~~~~~vlKv~r~~~~---~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G 111 (325)
T PRK11768 36 SYENRVYQFGD-EDGRRVVAKFYRPERW---SDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRGG 111 (325)
T ss_pred cccceEEEEec-CCCCEEEEEEcCcccC---CHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeCC
Confidence 34457899874 4567799998764432 234566788888777321 12221 121111114567889999887
Q ss_pred C
Q 011763 216 D 216 (478)
Q Consensus 216 ~ 216 (478)
.
T Consensus 112 ~ 112 (325)
T PRK11768 112 R 112 (325)
T ss_pred C
Confidence 4
No 498
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.98 E-value=0.073 Score=51.89 Aligned_cols=136 Identities=18% Similarity=0.205 Sum_probs=89.7
Q ss_pred eeeeeeecCceEEEEEEE-------CC---CCcEEEEEEeecC----------------------CCChHHHHHHH--HH
Q 011763 134 KLEKIGQGTYSSVFRARD-------LD---TGKIVALKKVRFD----------------------NFEPESVRFMA--RE 179 (478)
Q Consensus 134 ~~~~LG~G~~g~V~~~~~-------~~---~~~~vAlK~~~~~----------------------~~~~~~~~~~~--~E 179 (478)
|..+|..|.-+.|+.+.- .. .-+.+|||+++.. ..++..+-.++ +|
T Consensus 256 i~GiIsTGKEsvvlHAY~GS~E~~~qd~ql~ptecAIKvfKTTLnEFKnRd~YiKDDfRFKDRFSK~NpR~i~~mWAEkE 335 (531)
T KOG2269|consen 256 IDGIISTGKESVVLHAYAGSNEHGHQDPQLSPTECAIKVFKTTLNEFKNRDEYIKDDFRFKDRFSKQNPRGILKMWAEKE 335 (531)
T ss_pred hhhhhhcCcceEEEEeccCcccccccCcccCchHHHHHHHHHHHHHHhhhhhhhccchhhhhhhcccCcHHHHHHHHHHH
Confidence 345677888888988832 11 2346788887421 11222222333 34
Q ss_pred HHHHHhc-----CCCCeeeecceeeecCCceEEEEEeeccCCchhhccCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCce
Q 011763 180 ILILRRL-----DHPNIIKLEGLITSRLSCSIYLVFEYMEHDITGLLSCPDIKFSEAQIKCYMNQLLHGLEHCH-SRGVL 253 (478)
Q Consensus 180 ~~~l~~l-----~h~nIv~l~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~l~~~~~~~i~~qil~aL~~LH-~~giv 253 (478)
+.-|.++ .+|-+|.+- ...|||-|++..-+..-.-.+..|+..+.+..-.|+...+.-|. ++-+|
T Consensus 336 mhNL~RMq~~GlpcP~vV~lk---------khvLVMsFiGd~~~aAPkLK~v~l~d~E~~~aY~q~~~~M~~lY~Ec~LV 406 (531)
T KOG2269|consen 336 MHNLSRMQKHGLPCPQVVKLK---------KHVLVMSFIGDQGLAAPKLKNVELTDDERRNAYDQVQSIMCRLYKECLLV 406 (531)
T ss_pred HHHHHHHHhcCCCCCceeeee---------cceEEEEeecCCCCCCccccccccChHHHHHHHHHHHHHHHHHHHhhhee
Confidence 4445554 356666652 24699999987443333333446888899888899988887664 66899
Q ss_pred eccCCCCcEEEecCCcEEEeeccccc
Q 011763 254 HRDIKGSNLLVNNEGVLKLADFGLAN 279 (478)
Q Consensus 254 HrDlkp~NILl~~~~~vkl~DFG~a~ 279 (478)
|-||.--|+|...+ .+-++|...+.
T Consensus 407 HADlSEyN~Lw~~g-Kvw~IDVsQsv 431 (531)
T KOG2269|consen 407 HADLSEYNLLWTPG-KVWVIDVSQSV 431 (531)
T ss_pred ecchhhhhheecCC-ceEEEechhcc
Confidence 99999999999875 88899987764
No 499
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.57 E-value=0.26 Score=45.97 Aligned_cols=76 Identities=21% Similarity=0.264 Sum_probs=48.0
Q ss_pred ceeeeeeeeecCceEEEEEEECCCCcEEEEEEeecCCCChHHHHHHHHHHHHHHhcCCC---CeeeecceeeecCCceEE
Q 011763 131 AFEKLEKIGQGTYSSVFRARDLDTGKIVALKKVRFDNFEPESVRFMAREILILRRLDHP---NIIKLEGLITSRLSCSIY 207 (478)
Q Consensus 131 ~y~~~~~LG~G~~g~V~~~~~~~~~~~vAlK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---nIv~l~~~~~~~~~~~~~ 207 (478)
+.+..+.+.-|..-..|...+ ....|.+|.- ..+....+..|+.-|..|.-. .+.+++.+- ....+.|
T Consensus 17 ~i~er~~v~gG~inea~~v~d--g~~~~FvK~n-----~~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G--~~~~~sy 87 (286)
T COG3001 17 EIKEREEVSGGDINEAWRLRD--GTDPFFVKCN-----QREQLSMFTAEADGLELLARSNTITVPKVIAVG--ASRDHSY 87 (286)
T ss_pred hhhcccccCCccccceeEeec--CCcceEEEec-----chhhHHHHHHHHHHHHHHHhcCCccccceEEec--CCCCeeE
Confidence 344445565566666666653 3456888873 244456677788777777443 455554333 3367899
Q ss_pred EEEeeccC
Q 011763 208 LVFEYMEH 215 (478)
Q Consensus 208 lv~e~~~~ 215 (478)
|||||++-
T Consensus 88 lVle~L~~ 95 (286)
T COG3001 88 LVLEYLPT 95 (286)
T ss_pred EEEeeccC
Confidence 99999985
No 500
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=94.44 E-value=0.078 Score=52.15 Aligned_cols=29 Identities=28% Similarity=0.509 Sum_probs=25.6
Q ss_pred CCceeccCCCCcEEEecCCcEEEeeccccc
Q 011763 250 RGVLHRDIKGSNLLVNNEGVLKLADFGLAN 279 (478)
Q Consensus 250 ~givHrDlkp~NILl~~~~~vkl~DFG~a~ 279 (478)
.+++|+|+.+.||+++. +.+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 47899999999999987 678999999764
Done!