Query 011766
Match_columns 478
No_of_seqs 160 out of 1342
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 04:59:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011766.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011766hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK15493 5-methylthioadenosine 100.0 2.9E-57 6.3E-62 443.1 45.2 425 19-475 1-430 (435)
2 PRK06687 chlorohydrolase; Vali 100.0 1E-55 2.2E-60 432.6 43.1 412 21-463 2-418 (419)
3 PRK07228 N-ethylammeline chlor 100.0 4.1E-54 8.8E-59 425.0 46.0 430 19-475 1-434 (445)
4 PRK09045 N-ethylammeline chlor 100.0 7.2E-54 1.6E-58 421.8 46.0 427 18-474 6-434 (443)
5 PRK07203 putative chlorohydrol 100.0 3.3E-53 7.2E-58 417.0 43.6 421 21-475 2-435 (442)
6 TIGR03314 Se_ssnA putative sel 100.0 2.9E-53 6.2E-58 415.6 42.6 420 21-474 1-433 (441)
7 PRK08204 hypothetical protein; 100.0 1.7E-52 3.8E-57 414.2 44.4 424 19-474 2-436 (449)
8 PRK12393 amidohydrolase; Provi 100.0 6.6E-52 1.4E-56 407.9 45.6 432 19-474 2-448 (457)
9 PRK06038 N-ethylammeline chlor 100.0 9.7E-52 2.1E-56 404.4 45.7 418 19-474 2-420 (430)
10 PRK06380 metal-dependent hydro 100.0 7.4E-52 1.6E-56 405.6 44.6 410 19-469 1-414 (418)
11 PRK08203 hydroxydechloroatrazi 100.0 1.6E-51 3.5E-56 406.5 45.1 427 21-475 4-444 (451)
12 PRK08393 N-ethylammeline chlor 100.0 3.6E-51 7.8E-56 400.0 45.0 419 19-475 1-420 (424)
13 PRK06151 N-ethylammeline chlor 100.0 1.3E-50 2.8E-55 402.0 43.6 430 19-475 1-458 (488)
14 PRK09228 guanine deaminase; Pr 100.0 8.1E-50 1.8E-54 389.9 40.1 408 20-456 3-432 (433)
15 cd01298 ATZ_TRZ_like TRZ/ATZ f 100.0 2.3E-49 4.9E-54 389.7 43.6 410 21-460 1-411 (411)
16 cd01303 GDEase Guanine deamina 100.0 2.4E-49 5.2E-54 387.0 38.7 402 28-450 14-429 (429)
17 PRK09229 N-formimino-L-glutama 100.0 3.8E-48 8.1E-53 381.9 38.1 420 20-474 4-449 (456)
18 TIGR02022 hutF formiminoglutam 100.0 2.1E-47 4.5E-52 375.4 39.2 421 22-476 5-451 (455)
19 PRK08418 chlorohydrolase; Prov 100.0 3.3E-47 7.2E-52 368.2 39.8 391 21-453 2-407 (408)
20 TIGR02967 guan_deamin guanine 100.0 2.8E-47 6.1E-52 371.5 39.3 385 37-450 3-401 (401)
21 cd01313 Met_dep_hydrolase_E Me 100.0 1.2E-46 2.6E-51 366.7 35.8 388 36-451 6-418 (418)
22 COG0402 SsnA Cytosine deaminas 100.0 1.4E-45 3.1E-50 359.8 38.7 408 19-460 2-414 (421)
23 cd01312 Met_dep_hydrolase_D Me 100.0 1E-44 2.2E-49 347.3 36.0 364 48-451 1-381 (381)
24 KOG3968 Atrazine chlorohydrola 100.0 1.5E-45 3.2E-50 332.1 26.2 413 22-455 8-438 (439)
25 PRK07213 chlorohydrolase; Prov 100.0 8.9E-44 1.9E-48 341.9 36.7 367 21-452 2-375 (375)
26 PRK09356 imidazolonepropionase 100.0 2.5E-40 5.5E-45 323.6 31.5 380 18-455 2-406 (406)
27 COG1574 Predicted metal-depend 100.0 6.8E-39 1.5E-43 311.0 33.4 208 228-456 314-534 (535)
28 cd01293 Bact_CD Bacterial cyto 100.0 7.7E-39 1.7E-43 313.7 29.9 368 22-453 1-398 (398)
29 PRK09230 cytosine deaminase; P 100.0 8.3E-38 1.8E-42 304.1 35.3 372 18-456 3-407 (426)
30 PLN02942 dihydropyrimidinase 100.0 3E-38 6.5E-43 312.8 28.7 388 17-470 3-458 (486)
31 TIGR01224 hutI imidazoloneprop 100.0 7E-38 1.5E-42 303.5 29.4 354 39-452 2-377 (377)
32 cd01314 D-HYD D-hydantoinases 100.0 4.1E-38 9E-43 311.5 24.6 376 21-462 1-443 (447)
33 PRK07572 cytosine deaminase; V 100.0 3.7E-36 7.9E-41 294.2 35.0 372 19-458 2-405 (426)
34 PRK14085 imidazolonepropionase 100.0 7.6E-37 1.7E-41 295.2 29.2 346 19-421 1-364 (382)
35 TIGR02033 D-hydantoinase D-hyd 100.0 1.1E-36 2.5E-41 302.4 31.1 381 21-469 1-453 (454)
36 PRK08323 phenylhydantoinase; V 100.0 1.6E-37 3.4E-42 308.6 24.0 381 19-470 1-452 (459)
37 PRK05985 cytosine deaminase; P 100.0 2E-35 4.4E-40 286.7 31.3 368 19-457 2-391 (391)
38 PRK12394 putative metallo-depe 100.0 2.6E-35 5.6E-40 284.0 30.8 356 18-456 2-376 (379)
39 cd01296 Imidazolone-5PH Imidaz 100.0 1.3E-35 2.8E-40 287.1 28.3 351 43-450 1-371 (371)
40 COG1228 HutI Imidazolonepropio 100.0 7.1E-36 1.5E-40 284.1 23.1 373 18-458 9-405 (406)
41 cd01297 D-aminoacylase D-amino 100.0 6.2E-35 1.4E-39 284.5 28.2 362 20-466 1-415 (415)
42 PRK07583 cytosine deaminase-li 100.0 3.1E-33 6.8E-38 274.3 34.7 380 14-457 6-425 (438)
43 PRK10657 isoaspartyl dipeptida 100.0 4.3E-32 9.4E-37 263.9 31.9 343 19-462 1-384 (388)
44 TIGR01975 isoAsp_dipep isoaspa 100.0 5.1E-32 1.1E-36 257.8 31.1 339 21-461 2-384 (389)
45 PRK06846 putative deaminase; V 100.0 1.3E-31 2.8E-36 261.0 31.5 374 20-456 5-406 (410)
46 PRK09236 dihydroorotase; Revie 100.0 3.2E-32 6.9E-37 267.6 26.6 203 237-469 218-441 (444)
47 PRK06189 allantoinase; Provisi 100.0 6.2E-32 1.3E-36 266.1 28.3 377 18-470 2-447 (451)
48 PRK13309 ureC urease subunit a 100.0 6.8E-32 1.5E-36 262.3 27.9 340 18-459 67-466 (572)
49 cd01315 L-HYD_ALN L-Hydantoina 100.0 1E-31 2.2E-36 265.9 29.6 378 20-468 1-446 (447)
50 PLN02795 allantoinase 100.0 1.2E-31 2.6E-36 265.4 28.8 383 17-468 42-502 (505)
51 PRK13404 dihydropyrimidinase; 100.0 4.2E-32 9E-37 267.8 25.0 382 18-469 3-460 (477)
52 PRK07575 dihydroorotase; Provi 100.0 4.1E-32 8.8E-37 265.8 24.6 371 18-468 2-434 (438)
53 PRK15446 phosphonate metabolis 100.0 4E-31 8.6E-36 253.5 30.7 352 18-457 1-383 (383)
54 PRK09357 pyrC dihydroorotase; 100.0 2.1E-31 4.6E-36 261.5 28.8 362 19-456 1-423 (423)
55 cd01299 Met_dep_hydrolase_A Me 100.0 6.4E-32 1.4E-36 258.6 24.1 300 69-422 2-336 (342)
56 PRK09237 dihydroorotase; Provi 100.0 6.7E-31 1.5E-35 254.1 31.2 355 21-461 1-375 (380)
57 TIGR03178 allantoinase allanto 100.0 9.4E-32 2E-36 264.7 24.5 371 20-467 1-441 (443)
58 TIGR01792 urease_alph urease, 100.0 9E-31 2E-35 254.2 27.9 337 17-459 64-461 (567)
59 PRK13207 ureC urease subunit a 100.0 3.3E-30 7.1E-35 249.9 31.3 333 17-459 65-462 (568)
60 PRK09061 D-glutamate deacylase 100.0 3.5E-30 7.5E-35 255.3 30.9 373 17-470 17-506 (509)
61 PRK13206 ureC urease subunit a 100.0 4.9E-30 1.1E-34 247.9 30.9 330 17-456 69-463 (573)
62 PRK07627 dihydroorotase; Provi 100.0 4.3E-31 9.4E-36 256.4 21.4 359 19-456 1-424 (425)
63 PRK02382 dihydroorotase; Provi 100.0 1.5E-29 3.2E-34 248.7 30.2 377 18-470 1-435 (443)
64 PRK13985 ureB urease subunit b 100.0 1.1E-29 2.3E-34 243.2 27.6 335 16-456 62-458 (568)
65 COG1820 NagA N-acetylglucosami 100.0 6.2E-30 1.3E-34 233.0 23.5 346 21-455 2-380 (380)
66 KOG2584 Dihydroorotase and rel 100.0 3E-30 6.4E-35 232.3 20.6 390 17-468 12-468 (522)
67 TIGR02318 phosphono_phnM phosp 100.0 6.4E-29 1.4E-33 237.3 30.6 167 233-454 207-376 (376)
68 cd01300 YtcJ_like YtcJ_like me 100.0 7E-29 1.5E-33 247.7 32.0 176 230-416 290-479 (479)
69 cd01309 Met_dep_hydrolase_C Me 100.0 4.3E-30 9.4E-35 245.2 21.5 336 47-454 1-359 (359)
70 PRK13308 ureC urease subunit a 100.0 7.5E-29 1.6E-33 238.5 29.8 325 17-455 66-458 (569)
71 PLN02303 urease 100.0 8.3E-29 1.8E-33 245.8 29.1 345 17-456 332-727 (837)
72 COG0044 PyrC Dihydroorotase an 100.0 3.4E-28 7.3E-33 232.7 30.6 366 19-461 1-427 (430)
73 PRK08044 allantoinase; Provisi 100.0 6E-29 1.3E-33 243.8 26.0 376 18-467 2-447 (449)
74 cd00375 Urease_alpha Urease al 100.0 1.7E-28 3.6E-33 236.0 27.9 335 17-459 63-462 (567)
75 PRK09060 dihydroorotase; Valid 100.0 3.9E-28 8.4E-33 238.0 29.6 372 17-470 3-438 (444)
76 TIGR01178 ade adenine deaminas 100.0 9.2E-28 2E-32 238.0 30.5 327 20-460 1-342 (552)
77 PRK11170 nagA N-acetylglucosam 100.0 8.1E-28 1.8E-32 229.1 26.7 352 21-455 2-381 (382)
78 TIGR00221 nagA N-acetylglucosa 100.0 9.2E-28 2E-32 228.0 26.8 348 19-451 3-380 (380)
79 COG1001 AdeC Adenine deaminase 100.0 2.1E-27 4.6E-32 225.6 27.6 334 16-460 21-364 (584)
80 cd01308 Isoaspartyl-dipeptidas 100.0 8.8E-27 1.9E-31 226.4 32.6 340 21-461 2-382 (387)
81 PRK09059 dihydroorotase; Valid 100.0 7.1E-27 1.5E-31 227.3 30.1 361 18-455 2-428 (429)
82 TIGR03121 one_C_dehyd_A formyl 100.0 1.2E-26 2.6E-31 224.2 28.1 85 377-467 427-511 (556)
83 PRK08417 dihydroorotase; Provi 100.0 5E-27 1.1E-31 226.2 25.6 330 43-455 1-386 (386)
84 cd00854 NagA N-acetylglucosami 100.0 3.9E-27 8.6E-32 226.1 23.5 339 21-450 1-374 (374)
85 PRK01211 dihydroorotase; Provi 100.0 4.9E-27 1.1E-31 225.5 23.9 355 22-469 2-404 (409)
86 PRK10027 cryptic adenine deami 100.0 7.3E-26 1.6E-30 224.3 31.4 333 17-460 28-370 (588)
87 COG3964 Predicted amidohydrola 100.0 2E-26 4.4E-31 198.5 23.4 319 17-420 2-339 (386)
88 PRK07369 dihydroorotase; Provi 100.0 3.7E-26 8.1E-31 221.2 26.0 335 18-423 1-388 (418)
89 TIGR00857 pyrC_multi dihydroor 100.0 1.6E-26 3.5E-31 224.9 22.7 350 39-456 4-411 (411)
90 cd01305 archeal_chlorohydrolas 99.9 1.5E-26 3.3E-31 212.2 20.9 256 77-396 1-263 (263)
91 PRK04250 dihydroorotase; Provi 99.9 8.8E-26 1.9E-30 217.2 25.7 349 25-466 3-396 (398)
92 cd01304 FMDH_A Formylmethanofu 99.9 1.5E-25 3.2E-30 215.5 27.0 84 377-465 424-507 (541)
93 cd01307 Met_dep_hydrolase_B Me 99.9 8.3E-25 1.8E-29 208.0 25.4 296 42-420 1-316 (338)
94 COG3454 Metal-dependent hydrol 99.9 1.8E-24 4E-29 188.7 20.3 162 236-454 211-377 (377)
95 TIGR03583 EF_0837 probable ami 99.9 1.3E-23 2.8E-28 202.2 28.2 340 19-453 1-364 (365)
96 PRK00369 pyrC dihydroorotase; 99.9 9.4E-24 2E-28 201.8 23.3 327 40-462 13-380 (392)
97 COG3653 N-acyl-D-aspartate/D-g 99.9 5.1E-24 1.1E-28 192.2 19.1 93 379-472 473-570 (579)
98 COG1229 FwdA Formylmethanofura 99.9 1.9E-23 4.2E-28 187.1 20.0 85 378-465 436-520 (575)
99 PF01979 Amidohydro_1: Amidohy 99.9 7.1E-25 1.5E-29 209.7 11.7 290 77-418 1-333 (333)
100 cd01295 AdeC Adenine deaminase 99.9 1.9E-21 4.2E-26 189.9 26.2 173 233-457 119-293 (422)
101 COG0804 UreC Urea amidohydrola 99.9 1.2E-21 2.7E-26 175.3 17.3 332 16-455 64-457 (568)
102 cd01317 DHOase_IIa Dihydroorot 99.9 1.2E-21 2.6E-26 188.8 15.1 164 235-423 172-346 (374)
103 KOG3892 N-acetyl-glucosamine-6 99.9 4.6E-21 1E-25 162.9 14.8 357 20-457 13-406 (407)
104 PF07969 Amidohydro_3: Amidohy 99.9 4.6E-21 1E-25 188.1 16.9 177 224-416 214-404 (404)
105 cd01318 DHOase_IIb Dihydroorot 99.8 6.3E-20 1.4E-24 174.8 19.8 177 232-424 108-330 (361)
106 PRK06886 hypothetical protein; 99.8 1.1E-18 2.3E-23 162.0 25.6 272 81-400 21-328 (329)
107 cd01306 PhnM PhnM is believed 99.8 2.7E-18 5.9E-23 158.8 25.1 163 232-450 160-325 (325)
108 cd01302 Cyclic_amidohydrolases 99.8 2.5E-19 5.4E-24 169.7 18.6 179 214-422 92-308 (337)
109 PF13147 Amidohydro_4: Amidohy 99.8 1.8E-18 3.8E-23 163.0 11.5 78 324-415 225-304 (304)
110 cd01292 metallo-dependent_hydr 99.8 1.6E-16 3.4E-21 147.5 22.0 259 82-396 1-275 (275)
111 cd01320 ADA Adenosine deaminas 99.7 2E-14 4.4E-19 136.3 23.0 245 98-400 46-314 (325)
112 PRK09358 adenosine deaminase; 99.7 3E-14 6.6E-19 135.7 23.5 248 96-400 52-323 (340)
113 TIGR01430 aden_deam adenosine 99.6 7E-14 1.5E-18 132.3 23.0 241 101-400 48-313 (324)
114 cd01316 CAD_DHOase The eukaryo 99.6 5.3E-14 1.1E-18 132.6 21.2 73 378-461 259-339 (344)
115 PF13594 Amidohydro_5: Amidohy 99.5 1.5E-14 3.2E-19 102.2 6.1 44 43-90 1-44 (68)
116 cd01294 DHOase Dihydroorotase 99.4 1.1E-10 2.3E-15 111.1 21.9 161 233-410 111-308 (335)
117 cd00530 PTE Phosphotriesterase 99.0 1.1E-07 2.4E-12 88.9 20.4 237 123-397 30-293 (293)
118 cd00443 ADA_AMPD Adenosine/AMP 98.8 1.1E-07 2.4E-12 88.8 15.5 144 224-399 139-293 (305)
119 PRK05451 dihydroorotase; Provi 98.8 6.8E-07 1.5E-11 85.1 18.3 161 233-409 116-313 (345)
120 TIGR00010 hydrolase, TatD fami 98.7 4E-06 8.7E-11 76.6 22.0 137 235-399 108-252 (252)
121 TIGR00856 pyrC_dimer dihydroor 98.7 2.9E-06 6.2E-11 80.4 19.9 162 233-418 113-311 (341)
122 PRK09875 putative hydrolase; P 98.7 6.8E-06 1.5E-10 75.4 21.2 239 125-398 34-292 (292)
123 cd01310 TatD_DNAse TatD like p 98.6 1.1E-05 2.5E-10 73.5 21.8 135 234-398 107-251 (251)
124 PTZ00124 adenosine deaminase; 98.6 3.5E-06 7.6E-11 79.8 16.6 147 224-399 196-349 (362)
125 PLN02599 dihydroorotase 98.5 6E-06 1.3E-10 78.4 15.9 156 234-405 135-328 (364)
126 cd01321 ADGF Adenosine deamina 98.5 5.3E-06 1.2E-10 78.5 14.8 154 224-400 166-330 (345)
127 COG1816 Add Adenosine deaminas 98.4 6E-06 1.3E-10 76.6 13.7 140 230-400 180-326 (345)
128 PF00962 A_deaminase: Adenosin 98.3 1.1E-05 2.4E-10 76.9 12.6 135 235-400 180-321 (331)
129 PF02126 PTE: Phosphotriestera 98.2 2.4E-05 5.3E-10 72.3 13.5 233 124-397 37-307 (308)
130 PRK10812 putative DNAse; Provi 98.1 0.0011 2.4E-08 60.5 21.6 139 235-400 111-257 (265)
131 PRK11449 putative deoxyribonuc 98.1 0.00037 7.9E-09 63.4 18.1 138 234-399 113-258 (258)
132 COG1735 Php Predicted metal-de 98.0 0.0015 3.3E-08 58.5 19.8 242 122-399 45-314 (316)
133 TIGR01431 adm_rel adenosine de 98.0 0.00011 2.3E-09 72.4 13.7 154 224-400 293-456 (479)
134 KOG1097 Adenine deaminase/aden 98.0 0.00039 8.6E-09 64.9 15.5 141 233-400 225-372 (399)
135 COG1099 Predicted metal-depend 97.9 0.0017 3.6E-08 55.3 17.1 148 224-399 100-253 (254)
136 PRK10425 DNase TatD; Provision 97.8 0.0018 3.8E-08 58.8 16.2 139 235-399 108-258 (258)
137 COG0084 TatD Mg-dependent DNas 97.7 0.0035 7.5E-08 56.3 17.0 137 235-399 112-256 (256)
138 PF01026 TatD_DNase: TatD rela 97.6 0.0025 5.4E-08 58.1 15.1 134 235-398 111-255 (255)
139 PF07908 D-aminoacyl_C: D-amin 97.4 0.0001 2.2E-09 47.2 2.2 31 440-470 17-47 (48)
140 PF00449 Urease_alpha: Urease 97.0 0.0021 4.7E-08 48.2 6.1 36 18-57 65-100 (121)
141 PLN03055 AMP deaminase; Provis 96.7 0.024 5.3E-07 56.7 12.0 96 290-400 441-543 (602)
142 TIGR01429 AMP_deaminase AMP de 96.6 0.045 9.8E-07 55.1 13.5 133 237-401 424-566 (611)
143 cd01319 AMPD AMP deaminase (AM 96.6 0.03 6.4E-07 55.2 11.8 133 237-401 312-454 (496)
144 cd01311 PDC_hydrolase 2-pyrone 96.5 0.42 9.1E-06 43.8 18.2 100 233-347 108-224 (263)
145 PLN02768 AMP deaminase 96.0 0.065 1.4E-06 55.1 11.1 96 290-400 674-776 (835)
146 PTZ00310 AMP deaminase; Provis 95.7 0.14 3.1E-06 56.1 12.5 95 290-400 1134-1236(1453)
147 PRK06361 hypothetical protein; 94.9 0.11 2.3E-06 46.0 7.6 96 289-399 115-210 (212)
148 PTZ00310 AMP deaminase; Provis 93.7 0.33 7.2E-06 53.4 9.3 95 290-399 504-606 (1453)
149 COG2159 Predicted metal-depend 93.4 5.5 0.00012 37.1 15.7 142 234-401 143-292 (293)
150 PRK00912 ribonuclease P protei 92.0 1.3 2.9E-05 39.7 9.5 98 298-410 120-228 (237)
151 PF12890 DHOase: Dihydro-orota 91.5 0.06 1.3E-06 42.1 0.2 16 75-90 1-16 (142)
152 PF04909 Amidohydro_2: Amidohy 88.8 2.1 4.6E-05 39.1 8.3 167 214-399 96-273 (273)
153 COG0418 PyrC Dihydroorotase [N 83.0 3.7 8E-05 37.4 6.1 107 235-347 118-252 (344)
154 COG3618 Predicted metal-depend 82.4 39 0.00085 30.8 18.0 136 235-399 124-278 (279)
155 COG1603 RPP1 RNase P/RNase MRP 78.9 38 0.00082 29.9 10.7 87 297-398 114-210 (229)
156 COG4464 CapC Capsular polysacc 78.1 46 0.00099 29.0 13.5 17 329-345 180-196 (254)
157 COG1831 Predicted metal-depend 74.4 66 0.0014 29.1 11.1 137 232-400 142-283 (285)
158 TIGR01182 eda Entner-Doudoroff 66.9 68 0.0015 28.0 9.6 90 232-340 17-106 (204)
159 PRK06015 keto-hydroxyglutarate 64.6 76 0.0017 27.6 9.4 91 231-340 12-102 (201)
160 COG1387 HIS2 Histidinol phosph 61.6 1.2E+02 0.0026 27.1 11.8 49 299-347 150-198 (237)
161 COG0800 Eda 2-keto-3-deoxy-6-p 59.2 75 0.0016 27.7 8.3 90 233-341 23-112 (211)
162 cd01301 rDP_like renal dipepti 57.4 69 0.0015 30.1 8.6 93 236-346 155-267 (309)
163 PRK07945 hypothetical protein; 52.3 29 0.00063 33.0 5.3 48 299-346 248-295 (335)
164 PRK06552 keto-hydroxyglutarate 44.6 2.2E+02 0.0048 25.0 11.1 94 232-341 22-115 (213)
165 PF01081 Aldolase: KDPG and KH 43.2 86 0.0019 27.1 6.3 90 233-341 18-107 (196)
166 KOG3020 TatD-related DNase [Re 43.2 2.8E+02 0.006 25.8 11.9 68 237-317 137-204 (296)
167 TIGR01362 KDO8P_synth 3-deoxy- 42.6 2.5E+02 0.0054 25.4 9.1 120 225-344 49-184 (258)
168 PRK09140 2-dehydro-3-deoxy-6-p 42.1 2E+02 0.0044 25.1 8.6 92 231-341 18-110 (206)
169 PRK08392 hypothetical protein; 40.3 79 0.0017 27.8 5.9 45 300-346 141-185 (215)
170 PRK12595 bifunctional 3-deoxy- 37.8 2.9E+02 0.0064 26.6 9.6 122 225-346 159-298 (360)
171 TIGR01496 DHPS dihydropteroate 37.5 2.9E+02 0.0063 25.1 9.2 95 204-317 24-126 (257)
172 PF10055 DUF2292: Uncharacteri 37.1 44 0.00096 20.1 2.5 15 42-56 19-33 (38)
173 cd01733 LSm10 The eukaryotic S 36.9 1.1E+02 0.0025 21.8 5.1 35 17-53 41-75 (78)
174 PRK08609 hypothetical protein; 36.3 89 0.0019 32.3 6.3 47 300-346 483-529 (570)
175 cd01723 LSm4 The eukaryotic Sm 35.7 88 0.0019 22.2 4.4 38 17-55 33-70 (76)
176 cd01725 LSm2 The eukaryotic Sm 35.4 97 0.0021 22.3 4.6 41 16-56 32-72 (81)
177 PRK07114 keto-hydroxyglutarate 34.7 3.3E+02 0.0071 24.2 10.5 95 231-341 23-118 (222)
178 PRK03892 ribonuclease P protei 33.6 3.3E+02 0.0071 23.8 8.9 87 297-398 118-214 (216)
179 cd01721 Sm_D3 The eukaryotic S 32.0 1.5E+02 0.0032 20.6 5.0 36 17-54 32-67 (70)
180 PRK05198 2-dehydro-3-deoxyphos 31.7 4E+02 0.0087 24.3 9.2 121 224-344 56-192 (264)
181 PRK12457 2-dehydro-3-deoxyphos 30.7 4.3E+02 0.0093 24.3 9.4 120 225-344 63-200 (281)
182 PF01244 Peptidase_M19: Membra 30.0 4.8E+02 0.01 24.6 10.3 133 236-397 161-318 (320)
183 PRK07328 histidinol-phosphatas 29.9 68 0.0015 29.4 3.9 46 300-345 181-231 (269)
184 PF02811 PHP: PHP domain; Int 27.9 79 0.0017 26.2 3.8 39 132-170 23-64 (175)
185 PF12690 BsuPI: Intracellular 27.7 31 0.00066 25.0 0.9 15 406-420 20-34 (82)
186 PRK05718 keto-hydroxyglutarate 26.7 4.4E+02 0.0095 23.1 9.2 90 231-339 23-112 (212)
187 KOG4549 Magnesium-dependent ph 26.7 1.6E+02 0.0034 23.4 4.6 79 68-163 7-85 (144)
188 KOG0203 Na+/K+ ATPase, alpha s 25.6 1.5E+02 0.0032 31.8 5.6 115 228-344 586-714 (1019)
189 cd01724 Sm_D1 The eukaryotic S 24.5 2.4E+02 0.0052 20.8 5.2 36 17-54 33-68 (90)
190 PRK00881 purH bifunctional pho 23.7 2.1E+02 0.0046 28.9 6.1 38 130-167 468-506 (513)
191 TIGR01856 hisJ_fam histidinol 23.4 1.1E+02 0.0023 27.8 3.9 46 300-345 189-239 (253)
192 COG2355 Zn-dependent dipeptida 23.2 6.3E+02 0.014 23.8 12.1 144 236-397 150-307 (313)
193 KOG0202 Ca2+ transporting ATPa 23.2 5.8E+02 0.013 27.7 9.2 42 224-265 576-617 (972)
194 PF11068 YlqD: YlqD protein; 22.1 88 0.0019 25.0 2.7 14 40-53 117-130 (131)
No 1
>PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional
Probab=100.00 E-value=2.9e-57 Score=443.06 Aligned_cols=425 Identities=30% Similarity=0.452 Sum_probs=355.3
Q ss_pred ceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcccc
Q 011766 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (478)
Q Consensus 19 ~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~ 98 (478)
++++|+|+.|+|.+++..++++++|+|+||+|++||+..... ...++++||++|++|+|||||+|+|+.++.+++..
T Consensus 1 ~~~li~~~~v~t~~~~~~~~~~g~V~i~~g~I~~vg~~~~~~---~~~~~~viD~~g~~i~PGlVn~H~H~~~~~~rg~~ 77 (435)
T PRK15493 1 MKTTYVNATIVTMNEQNEVIENGYIIVENDQIIDVNSGEFAS---DFEVDEVIDMKGKWVLPGLVNTHTHVVMSLLRGIG 77 (435)
T ss_pred CeEEEEccEEEEeCCCCcEecCcEEEEECCEEEEEcCccccc---cCCCCeEEeCCCCEEccceeecccCccchhhhccC
Confidence 468999999999887667889999999999999999843211 11356899999999999999999999999999988
Q ss_pred CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCc---cCHHHHHHHHHHhCCeEEEecccccCCC
Q 011766 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGLRACLVQSTMDCGE 175 (478)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (478)
.+.++.+|+....|+.+..+++++.+......+.+++++||||+.|+.. .......+.....|++.+.+...++.+.
T Consensus 78 ~~~~l~~wl~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~~~~~ 157 (435)
T PRK15493 78 DDMLLQPWLETRIWPLESQFTPELAVASTELGLLEMVKSGTTSFSDMFNPIGVDQDAIMETVSRSGMRAAVSRTLFSFGT 157 (435)
T ss_pred CCCCHHHHHHhchhhchhcCCHHHHHHHHHHHHHHHHhCCccEEEccccccccCHHHHHHHHHHcCCcEEEeeeecCCCC
Confidence 8888999998888998888988888999999999999999999999753 2345667778889999988766654321
Q ss_pred CCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEec
Q 011766 176 GLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHV 255 (478)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~ 255 (478)
+. .....+. ...+.++++.. ..+.++..++++.+++++++.++++.++|+++|+++++|+
T Consensus 158 --~~-----~~~~~~~------------~~~~~~~~~~~-~~~~i~~~~~~~~~~t~s~e~l~~~~~~A~~~g~~v~~H~ 217 (435)
T PRK15493 158 --KE-----DEKKAIE------------EAEKYVKRYYN-ESGMLTTMVAPHSPYTCSTELLEECARIAVENQTMVHIHL 217 (435)
T ss_pred --Cc-----cHHHHHH------------HHHHHHHHhcC-CCCCeEEEEeCCCCCcCCHHHHHHHHHHHHHcCCcEEEEe
Confidence 00 0111111 44455555543 2467888899999999999999999999999999999999
Q ss_pred cCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCCcHHHHHHC
Q 011766 256 AEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHA 334 (478)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~ 334 (478)
.+...+...+...++ ..+++.+...+.+.++.++.||.++++++++++++.|+.+++||.+++.+ .+..|+++++++
T Consensus 218 ~e~~~e~~~~~~~~g--~~~~~~l~~~Gll~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~l~~g~~p~~~~~~~ 295 (435)
T PRK15493 218 SETEREVRDIEAQYG--KRPVEYAASCGLFKRPTVIAHGVVLNDNERAFLAEHDVRVAHNPNSNLKLGSGIANVKAMLEA 295 (435)
T ss_pred CCCHHHHHHHHHHhC--CCHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHHcCCeEEEChHHHHHHhcCcccHHHHHHC
Confidence 998877666665554 34788999999999999999999999999999999999999999999876 789999999999
Q ss_pred CCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccE
Q 011766 335 DICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADM 414 (478)
Q Consensus 335 gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADl 414 (478)
|+++++|||+...+++.+++++|+.+....+... .....++++++++++|.+||+++|++ ++|+|++|+.|||
T Consensus 296 Gv~v~lGtD~~~~~~~~d~~~~~~~a~~~~~~~~------~~~~~~~~~~~l~~aT~~gA~~lg~~-~~G~l~~G~~ADl 368 (435)
T PRK15493 296 GIKVGIATDSVASNNNLDMFEEMRIATLLQKGIH------QDATALPVETALTLATKGAAEVIGMK-QTGSLEVGKCADF 368 (435)
T ss_pred CCeEEEccCccccCCCcCHHHHHHHHHHHHhhcc------CCCCcCCHHHHHHHHhHHHHHHcCCC-CCCccCCCCcCCE
Confidence 9999999998766677899999998776654211 12346899999999999999999995 4899999999999
Q ss_pred EEEcCC-CCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHHHHHHh
Q 011766 415 VVVDPF-SWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLL 475 (478)
Q Consensus 415 vv~d~~-~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~ 475 (478)
|++|.+ .+...|..|+++.+++......|..|||+|++++++|+++.++.+++.++.+++.
T Consensus 369 vv~d~~~~~~~~p~~d~~~~lv~~~~~~~V~~v~V~G~~v~~~g~~~~~d~~~~~~~~~~~~ 430 (435)
T PRK15493 369 ITIDPSNKPHLQPADEVLSHLVYAASGKDISDVIINGKRVVWNGECKTLDEERIIFEASRYK 430 (435)
T ss_pred EEEcCCCCCCcCCccChHHhEEEeCCCCCccEEEECCEEEEECCeECCCCHHHHHHHHHHHH
Confidence 999974 5666788899999999888889999999999999999999999999988777653
No 2
>PRK06687 chlorohydrolase; Validated
Probab=100.00 E-value=1e-55 Score=432.56 Aligned_cols=412 Identities=29% Similarity=0.483 Sum_probs=342.6
Q ss_pred eEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCC
Q 011766 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (478)
Q Consensus 21 ~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~ 100 (478)
.+|+|+.|+|+++...++++++|+|+||+|++||+..+.. ...+.++||++|++|+|||||+|+|+.++.+++...+
T Consensus 2 ~~~~n~~vvt~d~~~~~~~~g~VlV~~g~I~aVg~~~~~~---~~~~~~viD~~g~~v~PGlIn~H~H~~~~~~rg~~~~ 78 (419)
T PRK06687 2 KVFQHVNIVTCDQDFHVYLDGILAVKDSQIVYVGQDKPAF---LEQAEQIIDYQGAWIMPGLVNCHTHSAMTGLRGIRDD 78 (419)
T ss_pred cceEeeEEEEeCCCceEecCcEEEEECCEEEEecCccccc---ccccCeEEeCCCCEEccceeeeccCCCccccccccCC
Confidence 4799999999988777889999999999999999854321 1124589999999999999999999999999988877
Q ss_pred CCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCc---cCHHHHHHHHHHhCCeEEEecccccCCCCC
Q 011766 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGLRACLVQSTMDCGEGL 177 (478)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 177 (478)
.++.+|+..+.|+.+..+++++.+......+.+++++||||+.++++ .......+.+...|++..++...+....
T Consensus 79 ~~~~~wl~~~~~~~~~~~~~~~~~~~~~~a~~e~l~~GvTTv~d~~~~~~~~~~~~~~a~~~~Gir~~~~~~~~~~~~-- 156 (419)
T PRK06687 79 SNLHEWLNDYIWPAESEFTPDMTTNAVKEALTEMLQSGTTTFNDMYNPNGVDIQQIYQVVKTSKMRCYFSPTLFSSET-- 156 (419)
T ss_pred CCHHHHHHhhhccccccCCHHHHHHHHHHHHHHHHhcCcceeehhhccccccHHHHHHHHHHhCCceEeccccccCCc--
Confidence 88999999888888878888777888888999999999999999753 2345667778888998876544332110
Q ss_pred CCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccC
Q 011766 178 PASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 257 (478)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~ 257 (478)
........ +..+.++++.......++.+++++..++++++.+.++.++|+++|+++++|+.+
T Consensus 157 ------~~~~~~~~------------~~~~~i~~~~~~~~~~i~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~i~~H~~e 218 (419)
T PRK06687 157 ------ETTAETIS------------RTRSIIDEILKYKNPNFKVMVAPHSPYSCSRDLLEASLEMAKELNIPLHVHVAE 218 (419)
T ss_pred ------ccHHHHHH------------HHHHHHHHHhccCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCC
Confidence 00111122 556666666554556788889999999999999999999999999999999999
Q ss_pred ChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCCcHHHHHHCCC
Q 011766 258 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADI 336 (478)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv 336 (478)
...+.......++ ..+++.+...+.++++.++.||.++++++++++++.|+.+++||.++... .+.+|+++++++|+
T Consensus 219 ~~~e~~~~~~~~g--~~~~~~l~~~g~l~~~~~~~H~~~~~~~~~~~la~~g~~v~~~P~sn~~l~~g~~p~~~~~~~Gv 296 (419)
T PRK06687 219 TKEESGIILKRYG--KRPLAFLEELGYLDHPSVFAHGVELNEREIERLASSQVAIAHNPISNLKLASGIAPIIQLQKAGV 296 (419)
T ss_pred CHHHHHHHHHHHC--cCHHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHHcCCeEEECcHHhhhhccCCCcHHHHHHCCC
Confidence 8877666655544 34678889999999999999999999999999999999999999998876 78899999999999
Q ss_pred cEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEE
Q 011766 337 CVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVV 416 (478)
Q Consensus 337 ~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv 416 (478)
++++|||+...+++.+++++|+.+........ .....++.+++++++|.+||+++|+++++|+|++|+.|||++
T Consensus 297 ~v~lGtD~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~aT~~gA~~lg~~~~~G~l~~G~~ADlv~ 370 (419)
T PRK06687 297 AVGIATDSVASNNNLDMFEEGRTAALLQKMKS------GDASQFPIETALKVLTIEGAKALGMENQIGSLEVGKQADFLV 370 (419)
T ss_pred eEEEeCCCCCCCCChhHHHHHHHHHHHhcccc------CCCccCCHHHHHHHHhHHHHHHcCCCCCCcccCCCccCCEEE
Confidence 99999998666677889999988765543210 112358999999999999999999988899999999999999
Q ss_pred EcCC-CCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeeccc
Q 011766 417 VDPF-SWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLM 463 (478)
Q Consensus 417 ~d~~-~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~ 463 (478)
+|.+ .+...|..||+..+++.....+|..|||+|++|+++|++++++
T Consensus 371 ~d~~~~~~~~p~~~~~~~lv~~~~~~~v~~v~v~G~~v~~~g~~~~~d 418 (419)
T PRK06687 371 IQPQGKIHLQPQENMLSHLVYAVKSSDVDDVYIAGEQVVKQGQVLTVE 418 (419)
T ss_pred ECCCCCCCcCCccCHHHHhheeCCCCCccEEEECCEEEEECCeEecCC
Confidence 9986 4677788899999999999999999999999999999998875
No 3
>PRK07228 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=4.1e-54 Score=424.96 Aligned_cols=430 Identities=36% Similarity=0.604 Sum_probs=346.1
Q ss_pred ceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcccc
Q 011766 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (478)
Q Consensus 19 ~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~ 98 (478)
|+++|+|++|+++++. ..+++++|+|+||+|++|++.... ...+++||++|++|+|||||+|+|+.+...++..
T Consensus 1 ~~~~i~~~~vi~~~~~-~~~~~g~V~I~dg~I~~vg~~~~~-----~~~~~vID~~G~~vlPGlId~H~H~~~~~~~g~~ 74 (445)
T PRK07228 1 MTILIKNAGIVTMNAK-REIVDGDVLIEDDRIAAVGDRLDL-----EDYDDHIDATGKVVIPGLIQGHIHLCQTLFRGIA 74 (445)
T ss_pred CeEEEEccEEEecCCC-cEecccEEEEECCEEEEecCCccc-----CcCCeEEeCCCCEEecCEEecccCCccccceecc
Confidence 5689999999998654 456899999999999999975421 1256899999999999999999999988777777
Q ss_pred CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc-CHHHHHHHHHHhCCeEEEecccccCCCCC
Q 011766 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSEMAKAVELLGLRACLVQSTMDCGEGL 177 (478)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 177 (478)
.+.++.+|+....++....+++++.+......+.+++.+||||++++++. ......+.....|++...+....+.+...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~L~~GvTtv~d~~~~~~~~~~~~a~~~~g~r~~~~~~~~~~~~~~ 154 (445)
T PRK07228 75 DDLELLDWLKDRIWPLEAAHDAESMYYSALLGIGELIESGTTTIVDMESVHHTDSAFEAAGESGIRAVLGKVMMDYGDDV 154 (445)
T ss_pred CCCCHHHHHHhhhhhhhhhCCHHHHHHHHHHHHHHHHhcCceEEEccccccChHHHHHHHHHcCCeEEEecceecCCcCC
Confidence 77788899988888888888888888888999999999999999998753 34566777888999887776655432111
Q ss_pred CCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccC
Q 011766 178 PASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 257 (478)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~ 257 (478)
+... .......+. +..+.++.+.....+.+...++++....++++.+++++++++++|+++++|+.+
T Consensus 155 p~~~-~~~~~~~l~------------~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e 221 (445)
T PRK07228 155 PEGL-QEDTEASLA------------ESVRLLEKWHGADNGRIRYAFTPRFAVSCTEELLRGVRDLADEYGVRIHTHASE 221 (445)
T ss_pred Cccc-cccHHHHHH------------HHHHHHHHhcCCCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCC
Confidence 1110 001111122 445556665443344566556777777889999999999999999999999998
Q ss_pred ChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCCcHHHHHHCCC
Q 011766 258 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADI 336 (478)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv 336 (478)
...+...+....+ ...++.+...+.++.+..+.|+.++++++++++++.|+.+++||.+++.. .+..|++++++.|+
T Consensus 222 ~~~~~~~~~~~~g--~~~~~~l~~~g~~~~~~~l~H~~~~~~~~~~~~~~~g~~v~~~P~~~~~~~~~~~p~~~~~~~Gv 299 (445)
T PRK07228 222 NRGEIETVEEETG--MRNIHYLDEVGLTGEDLILAHCVWLDEEEREILAETGTHVTHCPSSNLKLASGIAPVPDLLERGI 299 (445)
T ss_pred CHHHHHHHHHHhC--CCHHHHHHHCCCCCCCcEEEEEecCCHHHHHHHHHcCCeEEEChHHhhhcccccCcHHHHHHCCC
Confidence 8776665554443 33678888999999999999999999999999999999999999998766 67899999999999
Q ss_pred cEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEE
Q 011766 337 CVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVV 416 (478)
Q Consensus 337 ~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv 416 (478)
++++|||+++.....+++.+++.+........ .....+|++++++++|.+||+++|+++++|+|++|+.|||||
T Consensus 300 ~v~lGtD~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~s~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv 373 (445)
T PRK07228 300 NVALGADGAPCNNTLDPFTEMRQAALIQKVDR------LGPTAMPARTVFEMATLGGAKAAGFEDEIGSLEEGKKADLAI 373 (445)
T ss_pred eEEEcCCCCccCCCccHHHHHHHHHHHhhhcc------CCCcccCHHHHHHHHHHHHHHHhCCCCCccccCCCCccCEEE
Confidence 99999998776556788988887665433210 012358999999999999999999988899999999999999
Q ss_pred EcCCCCCCCCcC--ChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHHHHHHh
Q 011766 417 VDPFSWPMVPVH--DRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLL 475 (478)
Q Consensus 417 ~d~~~~~~~~~~--d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~ 475 (478)
+|.+.+...|.. ||+..+++.....+|..||++|++||++|+++..+.+++.++.++..
T Consensus 374 ld~~~~~~~p~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~~ 434 (445)
T PRK07228 374 LDLDGLHATPSHGVDVLSHLVYAAHGSDVETTMVDGKIVMEDGELTTIDADAVRREANRSI 434 (445)
T ss_pred EcCCCcccCCCcccCHHHHhheeCCCCCeeEEEECCEEEEECCeEccCCHHHHHHHHHHHH
Confidence 999988877777 88888888777889999999999999999999999999988776653
No 4
>PRK09045 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=7.2e-54 Score=421.82 Aligned_cols=427 Identities=32% Similarity=0.531 Sum_probs=342.5
Q ss_pred cceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccc
Q 011766 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~ 97 (478)
+.+++|+|+.|+|++++..++++++|+|+||+|++||+..+....+ .+.++||++|++|+|||||+|+|+.++.+++.
T Consensus 6 ~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~~~~~--~~~~~iD~~g~~v~PG~id~H~Hl~~~~~~g~ 83 (443)
T PRK09045 6 PVDLLIEARWIVPVEPAGVVLEDHAVAIRDGRIVAILPRAEARARY--AAAETVELPDHVLIPGLINAHTHAAMSLLRGL 83 (443)
T ss_pred cccEEEEccEEEEeCCCceEeeccEEEEECCEEEEecCcccccccC--CcceEEeCCCCEEecCEeccccChhhHhhhhc
Confidence 3589999999999886667889999999999999999864432211 24689999999999999999999999888877
Q ss_pred cCCCCchHHhhhcccccc-CCCChHHHHHHHHHHHHHHHhcCcceeecCCccCHHHHHHHHHHhCCeEEEecccccCCCC
Q 011766 98 ADDVDLMTWLHDRIWPYE-SNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEG 176 (478)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 176 (478)
....++.+|+....|+.+ ..++++..+......+.+++++||||++++. .......+.....|++.+.+...++..
T Consensus 84 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~G~Ttv~d~~-~~~~~~~~~~~~~G~R~~~~~~~~~~~-- 160 (443)
T PRK09045 84 ADDLPLMTWLQDHIWPAEGAWVSEEFVRDGTLLAIAEMLRGGTTCFNDMY-FFPEAAAEAAHQAGMRAQIGMPVLDFP-- 160 (443)
T ss_pred cCCCCHHHHHHhhhhhhhhccCCHHHHHHHHHHHHHHHHhcCCcEEEecc-ccHHHHHHHHHHcCCeEEEecccccCC--
Confidence 777788899987666544 3356777788888899999999999999975 334555677788999987776554321
Q ss_pred CCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEecc
Q 011766 177 LPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 256 (478)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~ 256 (478)
..+. ....+.+. ...+..+++. +.+.+++.+.++..+.++++.+++++++|+++|+++++|+.
T Consensus 161 --~~~~-~~~~~~l~------------~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~ 223 (443)
T PRK09045 161 --TAWA-SDADEYLA------------KGLELHDQWR--HHPLISTAFAPHAPYTVSDENLERIRTLAEQLDLPIHIHLH 223 (443)
T ss_pred --Cccc-cCHHHHHH------------HHHHHHHHhc--CCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHcCCCEEEeec
Confidence 1110 00111111 2234444443 34678888888988999999999999999999999999998
Q ss_pred CChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCCcHHHHHHCC
Q 011766 257 EIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHAD 335 (478)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~g 335 (478)
+...+........+ ..+++.+...+.++++.++.||.++++++++++++.|+.+++||.+++.. .+..|++++++.|
T Consensus 224 e~~~~~~~~~~~~g--~~~~~~l~~~g~l~~r~~~~H~~~l~~~~~~~la~~g~~i~~~P~~~~~~~~~~~~~~~l~~~G 301 (443)
T PRK09045 224 ETAQEIADSLKQHG--QRPLARLARLGLLGPRLIAVHMTQLTDAEIALLAETGCSVVHCPESNLKLASGFCPVAKLLQAG 301 (443)
T ss_pred CcHHHHHHHHHHhC--CCHHHHHHHcCCCCCCeEEEEecCCCHHHHHHHHHcCCeEEECHHHHhhhccCCCcHHHHHHCC
Confidence 76665554444333 34678888999999999999999999999999999999999999988765 5688999999999
Q ss_pred CcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEE
Q 011766 336 ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMV 415 (478)
Q Consensus 336 v~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlv 415 (478)
+++++|||++....+.+++.+++.+....... .....+++++++|+++|.+||+.+|+++++|+|++|+.||||
T Consensus 302 v~v~lGtD~~~~~~~~~~~~~~~~a~~~~~~~------~~~~~~~~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~ADlv 375 (443)
T PRK09045 302 VNVALGTDGAASNNDLDLFGEMRTAALLAKAV------AGDATALPAHTALRMATLNGARALGLDDEIGSLEPGKQADLV 375 (443)
T ss_pred CeEEEecCCCCCCCCccHHHHHHHHHHHHhhc------cCCCCcCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCcCCEE
Confidence 99999999876656678899888775443211 112346899999999999999999998889999999999999
Q ss_pred EEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHHHHHH
Q 011766 416 VVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKL 474 (478)
Q Consensus 416 v~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~ 474 (478)
|+|.+++...|..|+...+++.....+|..||++|++||++|++++.+.++++++.+++
T Consensus 376 v~d~~~~~~~p~~~~~~~lv~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~ 434 (443)
T PRK09045 376 AVDLSGLETQPVYDPVSQLVYAAGREQVSHVWVAGKQLLDDRELTTLDEAELLARARQW 434 (443)
T ss_pred EEeCCCCCcCCccChHhHhhEeCCCCCccEEEECCEEEEECCcCCCCCHHHHHHHHHHH
Confidence 99999888778888888888877788999999999999999999999999999877654
No 5
>PRK07203 putative chlorohydrolase/aminohydrolase; Validated
Probab=100.00 E-value=3.3e-53 Score=416.99 Aligned_cols=421 Identities=25% Similarity=0.411 Sum_probs=341.8
Q ss_pred eEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccC-
Q 011766 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD- 99 (478)
Q Consensus 21 ~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~- 99 (478)
++|+|++|++.++...+..+++|+|+||+|++||+..+....+ ...++||++|++|+|||||+|+|+.++.+++...
T Consensus 2 ~li~~~~i~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~~~~--~~~~viD~~g~lv~PGfID~H~H~~~~~~rg~~~~ 79 (442)
T PRK07203 2 LLIGNGTAITRDPAKPVIEDGAIAIEGNVIVEIGTTDELKAKY--PDAEFIDAKGKLIMPGLINSHNHIYSGLARGMMAN 79 (442)
T ss_pred EEEECCEEEeCCCCCceeeccEEEEECCEEEEEeCchhhcccc--CCCeEEeCCCCEEecceeeccccchhhhhcccccc
Confidence 5799999998766545677899999999999999743321111 2457999999999999999999999888777542
Q ss_pred ---CCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc------CHHHHHHHHHHhCCeEEEeccc
Q 011766 100 ---DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ------HVSEMAKAVELLGLRACLVQST 170 (478)
Q Consensus 100 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~------~~~~~~~~~~~~g~~~~~~~~~ 170 (478)
..++.+|+....|+.+..+++++.+...+..+.+++++||||++|+... ......+.....|++.+.+...
T Consensus 80 ~~~~~~l~~~l~~~~~~~~~~~t~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~~~ 159 (442)
T PRK07203 80 IPPPPDFISILKNLWWRLDRALTLEDVYYSALICSLEAIKNGVTTVFDHHASPNYIGGSLFTIADAAKKVGLRAMLCYET 159 (442)
T ss_pred cCCCCCHHHHHHhheehhhhcCCHHHHHHHHHHHHHHHHHcCceEEEccccccccccchHHHHHHHHHHhCCeEEEeccc
Confidence 2478899988888888889999999998889999999999999986421 1235567788899999876554
Q ss_pred ccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCc
Q 011766 171 MDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTG 250 (478)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~ 250 (478)
.+.+ + .......+. ...++++++.....+.+..+++++..++++++.++++.++|+++|++
T Consensus 160 ~d~~-~------~~~~~~~l~------------~~~~~~~~~~~~~~~~v~~~~~p~~~~~~s~~~l~~~~~lA~~~g~~ 220 (442)
T PRK07203 160 SDRD-G------EKELQEGVE------------ENIRFIKHIDEAKDDMVEAMFGLHASFTLSDATLEKCREAVKETGRG 220 (442)
T ss_pred ccCC-c------chhHHHHHH------------HHHHHHHHhcCCCCCceEEEEccCCCcCcCHHHHHHHHHHHHHcCCc
Confidence 4321 0 000111122 45555666655445678888999999999999999999999999999
Q ss_pred eeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCCcHH
Q 011766 251 IHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIK 329 (478)
Q Consensus 251 v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~ 329 (478)
+++|+.+...+.......++ ..+++.+...+.++++.++.||.++++++++++++.|+.+++||.+|+.. .+.+|++
T Consensus 221 i~~H~~E~~~e~~~~~~~~g--~~~v~~l~~~Gll~~~~~~~H~~~~~~~d~~~la~~g~~v~~~P~sn~~l~~g~~p~~ 298 (442)
T PRK07203 221 YHIHVAEGIYDVSDSHKKYG--KDIVERLADFGLLGEKTLAAHCIYLSDEEIDLLKETDTFVVHNPESNMGNAVGYNPVL 298 (442)
T ss_pred EEEEecCChHHHHHHHHHcC--CCHHHHHHhCCCCCCCcEEEEeecCCHHHHHHHHhcCCeEEECchhhhhcccCCCCHH
Confidence 99999999988877776554 45889999999999999999999999999999999999999999999887 6799999
Q ss_pred HHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC--CCCCccccc
Q 011766 330 EMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL--WDNDIGSLE 407 (478)
Q Consensus 330 ~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lg--l~~~~G~l~ 407 (478)
+|+++|+++++|||+. +.+++++|+.+....+... . ....+.+++++++|.+||+.+| +++++|+|+
T Consensus 299 ~~~~~Gv~v~lGtD~~----~~d~~~~~~~a~~~~~~~~------~-~~~~~~~~~~~~aT~~gA~~lg~~~~~~~G~l~ 367 (442)
T PRK07203 299 EMIKNGILLGLGTDGY----TSDMFESYKVANFKHKHAG------G-DPNVGWPESPAMLFENNNKIAERYFGAKFGILE 367 (442)
T ss_pred HHHHCCCeEEEcCCCC----CccHHHHHHHHHHHhcccc------C-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 9999999999999974 2489999988876554210 0 1124578999999999999999 456789999
Q ss_pred cCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHHHHHHh
Q 011766 408 AGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLL 475 (478)
Q Consensus 408 ~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~ 475 (478)
+|+.||||++|.+.....+..||++.+++......|..|||+|++|+++|++++.+.+++.++.+++.
T Consensus 368 ~G~~ADlvv~d~~~~~~~~~~~~~~~~v~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~i~~~~~~~~ 435 (442)
T PRK07203 368 EGAKADLIIVDYNPPTPLNEDNINGHILFGMNGGSVDTTIVNGKVVMEDRKFLNFDEESIYARARKAA 435 (442)
T ss_pred CCCccCEEEEcCCCCeecCccccccceEeecCCCceEEEEECCEEEEECCcccccCHHHHHHHHHHHH
Confidence 99999999999986555566788888888888899999999999999999999999999887776654
No 6
>TIGR03314 Se_ssnA putative selenium metabolism protein SsnA. Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown.
Probab=100.00 E-value=2.9e-53 Score=415.61 Aligned_cols=420 Identities=25% Similarity=0.411 Sum_probs=342.6
Q ss_pred eEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCC
Q 011766 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (478)
Q Consensus 21 ~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~ 100 (478)
++|+|++|++.+++..++.+++|+|++|+|++|++..+..... .+.++||++|++|+|||||+|+|+.+..+++...+
T Consensus 1 ~li~~~~i~t~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~--~~~~~id~~g~~v~PG~vd~H~H~~~~~~rg~~~d 78 (441)
T TIGR03314 1 LLIGNGTAVQLDPTRPIQEGGDIAIDGDVIKAVGPTEELKQKY--PEATFIDAKGKLIMPGFINTHNHFYSTFARGMMAD 78 (441)
T ss_pred CEEECCEEEecCCCCceEeccEEEEECCEEEEEcCchhhcccC--CCCeEEeCCCCEEecCeeecccchhhhhhcccccc
Confidence 4799999998776555778999999999999999864332111 24578999999999999999999998888876543
Q ss_pred ----CCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc------CHHHHHHHHHHhCCeEEEeccc
Q 011766 101 ----VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ------HVSEMAKAVELLGLRACLVQST 170 (478)
Q Consensus 101 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~------~~~~~~~~~~~~g~~~~~~~~~ 170 (478)
.++.+|+....|+.+..+++++.+......+.+++++||||++|+... ......+.....|++.+++...
T Consensus 79 ~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~~~ 158 (441)
T TIGR03314 79 IPPPPDFISILKNLWWRLDRALTLEDVYYSGLICSLDAIKSGCTTVIDHHASPNAITGSLSTIRKAADEAGLRTMLCYET 158 (441)
T ss_pred CCCCCCHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHHHcCCeEEEecccccccccchHHHHHHHHHHhCCeEEEeeee
Confidence 368899988888888889999999999999999999999999997421 1345678889999999887665
Q ss_pred ccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCc
Q 011766 171 MDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTG 250 (478)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~ 250 (478)
++.... ......+. ...++++++.....+.++..++++.+++++++.++++.++|++++++
T Consensus 159 ~~~~~~-------~~~~~~l~------------~~~~~~~~~~~~~~~~i~~~~~p~~~~t~s~~~l~~~~~lA~~~~~~ 219 (441)
T TIGR03314 159 SDRDGG-------KEMQEGVE------------ENIAFIKKSSGKEPYLVEAHIGAHAPFTVSDAGLEMCREAVQATGRG 219 (441)
T ss_pred ecCCCc-------ccHHHHHH------------HHHHHHHHhccCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHcCCC
Confidence 542110 00111111 34455566655445678888999999999999999999999999999
Q ss_pred eeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCCcHH
Q 011766 251 IHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIK 329 (478)
Q Consensus 251 v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~ 329 (478)
+++|+.+...+.......++ ..+++.++..+.++++.++.||.++++++++++++.|+.+++||.+|+.+ .+.+|+.
T Consensus 220 i~~H~~E~~~e~~~~~~~~g--~~~~~~l~~~G~l~~~~~~~H~~~~~~~d~~~la~~g~~v~~cP~sn~~l~~G~~p~~ 297 (441)
T TIGR03314 220 FHIHVAEDIYDVEDSHHKYG--KDIVERLADFGLLGSKTLAAHCIYLSDREIELLNETDTFVVHNPESNMGNAVGYNPVL 297 (441)
T ss_pred EEEEcCCCHHHHHHHHHHcC--CCHHHHHHHCCCCCCCeEEEEEecCCHHHHHHHHHcCCcEEECHHHHhhhccCCCCHH
Confidence 99999999888777766554 45889999999999999999999999999999999999999999999987 6899999
Q ss_pred HHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC--CCCCccccc
Q 011766 330 EMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL--WDNDIGSLE 407 (478)
Q Consensus 330 ~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lg--l~~~~G~l~ 407 (478)
+++++|+++++|||+.. .+++++|+.+....+... ......+.++++++|.++|+.++ +..++|+|+
T Consensus 298 ~~~~~Gv~v~LGtD~~~----~d~~~em~~a~~~~~~~~-------~~~~~~~~~~~~~aT~~ga~al~~~l~~~~G~Le 366 (441)
T TIGR03314 298 RMFKNGILLGLGTDGYT----SDMFESLKFANFKHKDAG-------GDLNAAWPESPAMLFENNNEIAERNFGAKFGRLE 366 (441)
T ss_pred HHHHCCCEEEEcCCCCC----cCHHHHHHHHHHHhcccc-------CCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999742 489999998877654221 11123467899999999999996 445689999
Q ss_pred cCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHHHHHH
Q 011766 408 AGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKL 474 (478)
Q Consensus 408 ~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~ 474 (478)
+|+.|||+++|.+.....+..++.+.+++.....+|..|||+|++|++++++++++.+++.++.+++
T Consensus 367 ~G~~ADlvv~d~~~~~~~~~~~~~~~lv~~~~~~~V~~v~V~G~~v~~~~~~~~~d~~~i~~~~~~~ 433 (441)
T TIGR03314 367 PGAKADLIIVDYNAPTPLTADNINGHILFGMNGGSVDSTMVNGKVVMEDREFLHFDEAPIYARARKL 433 (441)
T ss_pred CCCcccEEEEcCCCCeeechhhccccceecCCCCeeEEEEECCEEEEECCcccccCHHHHHHHHHHH
Confidence 9999999999998666566677777888777788999999999999999999999999988776654
No 7
>PRK08204 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-52 Score=414.16 Aligned_cols=424 Identities=26% Similarity=0.363 Sum_probs=335.1
Q ss_pred ceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcccc
Q 011766 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (478)
Q Consensus 19 ~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~ 98 (478)
..++|+|+.|++.++..+.+.+++|+|++|+|++|++..+. .+.++||++|++|+|||||+|+|+.+..+++..
T Consensus 2 ~~~li~~~~v~~~~~~~~~~~~~~v~V~~g~I~~Vg~~~~~------~~~~viD~~g~~v~PGlId~H~H~~~~~~~~~~ 75 (449)
T PRK08204 2 KRTLIRGGTVLTMDPAIGDLPRGDILIEGDRIAAVAPSIEA------PDAEVVDARGMIVMPGLVDTHRHTWQSVLRGIG 75 (449)
T ss_pred CcEEEECcEEEecCCCCCccccceEEEECCEEEEecCCCCC------CCCeEEeCCCCEEecCEEeeeeccchhhhcccc
Confidence 45789999999887755677899999999999999985331 245799999999999999999999888888777
Q ss_pred CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc-----CHHHHHHHHHHhCCeEEEecccccC
Q 011766 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKAVELLGLRACLVQSTMDC 173 (478)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (478)
.+.++.+|+....++....+++++.+........+++++||||+++++.. ......+.+...|++...+......
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~L~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~G~r~~~~~~~~~~ 155 (449)
T PRK08204 76 ADWTLQTYFREIHGNLGPMFRPEDVYIANLLGALEALDAGVTTLLDWSHINNSPEHADAAIRGLAEAGIRAVFAHGSPGP 155 (449)
T ss_pred CCCcHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHhcCCeEEeecccccCChhHHHHHHHHHHHcCCeEEEEccccCC
Confidence 67778888876666777788888888888888999999999999986532 2345567778889988765544332
Q ss_pred CCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeE
Q 011766 174 GEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHM 253 (478)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~ 253 (478)
+. .+.......... ....+++++....+..+.....++....++++.+.+++++|++.|+++++
T Consensus 156 ~~----~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~ 219 (449)
T PRK08204 156 SP----YWPFDSVPHPRE------------DIRRVKKRYFSSDDGLLTLGLAIRGPEFSSWEVARADFRLARELGLPISM 219 (449)
T ss_pred CC----CCCcchhhhhHH------------HHHHHHHhhccCCCCceEEEEecCCcccCCHHHHHHHHHHHHHcCCcEEE
Confidence 21 111111111111 44455555555444455555666666677889999999999999999999
Q ss_pred eccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCCcHHHHH
Q 011766 254 HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEML 332 (478)
Q Consensus 254 H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~ 332 (478)
|+.+.... .....++.+...+.++.+..+.|+.++++++++++++.|+.+++||.++... .+..|+++++
T Consensus 220 H~~e~~~~---------~~~~~~~~l~~~g~~~~~~~i~H~~~~~~~~~~~la~~g~~v~~~P~~~~~~g~~~~~~~~~~ 290 (449)
T PRK08204 220 HQGFGPWG---------ATPRGVEQLHDAGLLGPDLNLVHGNDLSDDELKLLADSGGSFSVTPEIEMMMGHGYPVTGRLL 290 (449)
T ss_pred EEcCCCcc---------cCCCHHHHHHHCCCCCCCeEEEecCCCCHHHHHHHHHcCCCEEEChHHHhhhcCCCCcHHHHH
Confidence 99876542 1123567777888888899999999999999999999999999999988765 5688999999
Q ss_pred HCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccc----cC-CCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccc
Q 011766 333 HADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVF----AN-GTTDPAALPAETVLRMATINGAKSVLWDNDIGSLE 407 (478)
Q Consensus 333 ~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~ 407 (478)
++|+++++|||+++. ++.+++.+|+.+.......... .. .+..+.++++.++|+++|.++|+++|+++++|+|+
T Consensus 291 ~~Gv~v~lGtD~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~gA~~lg~~~~~G~le 369 (449)
T PRK08204 291 AHGVRPSLGVDVVTS-TGGDMFTQMRFALQAERARDNAVHLREGGMPPPRLTLTARQVLEWATIEGARALGLEDRIGSLT 369 (449)
T ss_pred hcCCceeeccccCCC-CCcCHHHHHHHHHHHHHhhcccccccccccCCCcCCCCHHHHHHHHhHHHHHHcCCCCCCcccC
Confidence 999999999997543 5678999998877543321100 00 01134679999999999999999999988899999
Q ss_pred cCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHHHHHH
Q 011766 408 AGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKL 474 (478)
Q Consensus 408 ~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~ 474 (478)
+||.|||||+|.+++...|..||++.+++.....+|..||++|++|++++++++++.+++.++.++.
T Consensus 370 ~Gk~ADlvvld~~~~~~~p~~dp~~~lv~~~~~~~v~~v~v~G~~v~~~~~~~~~d~~~~~~~~~~~ 436 (449)
T PRK08204 370 PGKQADLVLIDATDLNLAPVHDPVGAVVQSAHPGNVDSVMVAGRAVKRNGKLLGVDLERLRRLAAAS 436 (449)
T ss_pred CCCcCCEEEEcCCCccccCCcChhhhheeccCCCCceEEEECCEEEEECCEeccCCHHHHHHHHHHH
Confidence 9999999999999888889999999888877789999999999999999999999999988877654
No 8
>PRK12393 amidohydrolase; Provisional
Probab=100.00 E-value=6.6e-52 Score=407.88 Aligned_cols=432 Identities=25% Similarity=0.338 Sum_probs=338.8
Q ss_pred ceeEEEecE-EEeeCCCCceeec-ceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcc
Q 011766 19 STMILHNAV-IVTMDKESRVFRN-GGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (478)
Q Consensus 19 ~~~~i~n~~-I~t~d~~~~~~~~-~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~ 96 (478)
.+++|+|++ |+|.+++...+.+ ++|+|++|+|++|++. . +..++++||++|++|+|||||+|+|+.++.+++
T Consensus 2 ~~~li~~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~Vg~~-~-----~~~~~~viD~~g~~v~PG~VnaH~Hl~~~~~rg 75 (457)
T PRK12393 2 PSLLIRNAAAIMTGLPGDAARLGGPDIRIRDGRIAAIGAL-T-----PLPGERVIDATDCVVYPGWVNTHHHLFQSLLKG 75 (457)
T ss_pred CcEEEECCeEEEecCCCccccccCceEEEECCEEEEEecc-C-----CCCCCeEEeCCCCEEecCEeecccCcccccccc
Confidence 578999996 7876554334444 4899999999999972 1 123568999999999999999999999999888
Q ss_pred cc--CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc--------CHHHHHHHHHHhCCeEEE
Q 011766 97 IA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLGLRACL 166 (478)
Q Consensus 97 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~--------~~~~~~~~~~~~g~~~~~ 166 (478)
.. .+.++.+|+....|+.+..+++++.+...+.++.+++++||||++|++.. ......++....|++...
T Consensus 76 ~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~a~~~~G~R~~~ 155 (457)
T PRK12393 76 VPAGINQSLTAWLAAVPYRFRARFDEDLFRLAARIGLVELLRSGCTTVADHHYLYHPGMPFDTGDILFDEAEALGMRFVL 155 (457)
T ss_pred cccccCCchHHHhhhCcchhhhhCCHHHHHHHHHHHHHHHHhCCccEeecchhhcccccccchHHHHHHHHHHcCCeEEE
Confidence 74 35578899988888877888999999999999999999999999987421 135677888999999987
Q ss_pred ecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCC-CCCeEEEEecccc-ccCCHHHHHHHHHHH
Q 011766 167 VQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAA-DGRIRIWFGIRQI-MNATDRLLLETRDMA 244 (478)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~l~~~~~~a 244 (478)
+....+...+.+..+.......... .......++.+++.... ...+++.+.++.. ++++++.+.++.+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a 227 (457)
T PRK12393 156 CRGGATQTRGDHPGLPTALRPETLD--------QMLADVERLVSRYHDASPDSLRRVVVAPTTPTFSLPPELLREVARAA 227 (457)
T ss_pred EccccccccccCCCCCCcccccCHH--------HHHHHHHHHHHHhcCCCcCCceEEEEcCCCCCCCcCHHHHHHHHHHH
Confidence 7654432111111110000000000 00012344445543322 2346666777776 889999999999999
Q ss_pred HHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-c
Q 011766 245 REFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-L 323 (478)
Q Consensus 245 ~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~ 323 (478)
+++|+++++|+.+...+........+ ..+++.+...+.++++.++.||.++++++++++++.|+.+++||.++++. .
T Consensus 228 ~~~g~~~~~H~~e~~~~~~~~~~~~g--~~~~~~l~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~lg~ 305 (457)
T PRK12393 228 RGMGLRLHSHLSETVDYVDFCREKYG--MTPVQFVAEHDWLGPDVWFAHLVKLDAEEIALLAQTGTGIAHCPQSNGRLGS 305 (457)
T ss_pred HHcCCeEEEEeCCCHHHHHHHHHHhC--CCHHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHHcCCeEEECchhhhhhcc
Confidence 99999999999988776665554433 34678889999999999999999999999999999999999999998877 6
Q ss_pred CCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCc
Q 011766 324 GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDI 403 (478)
Q Consensus 324 ~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~ 403 (478)
+.+|++++++.|+++++|||+...+.+.+++.+|+.+....... .....++.+++++++|.+||+++|+++ +
T Consensus 306 g~~~~~~~~~~Gv~v~lGtD~~~~~~~~d~~~~~~~a~~~~~~~-------~~~~~~~~~~~l~~~T~~~A~~l~~~~-~ 377 (457)
T PRK12393 306 GIAPALAMEAAGVPVSLGVDGAASNESADMLSEAHAAWLLHRAE-------GGADATTVEDVVHWGTAGGARVLGLDA-I 377 (457)
T ss_pred cCCCHHHHHHCCCeEEEecCCcccCCCccHHHHHHHHHHHhhhc-------CCCCCCCHHHHHHHHhHHHHHHhCCCC-C
Confidence 78999999999999999999876656789999999877654321 112358999999999999999999964 8
Q ss_pred cccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHHHHHH
Q 011766 404 GSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKL 474 (478)
Q Consensus 404 G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~ 474 (478)
|+|++|+.|||+|+|.+.....+..||....+......+|..||++|+++|++|+++.++.+++.+..+++
T Consensus 378 G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~~~~~~~d~~~i~~~~~~~ 448 (457)
T PRK12393 378 GTLAVGQAADLAIYDLDDPRFFGLHDPAIAPVACGGPAPVKALLVNGRPVVENGAIPGLDLAELRHDARAA 448 (457)
T ss_pred CCcCCCCcCCEEEEeCCCcccCCCCCchhhhhccCCCCCeeEEEECCEEEEECCccCCCCHHHHHHHHHHH
Confidence 99999999999999999877777778887777777788999999999999999999999999998877665
No 9
>PRK06038 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=9.7e-52 Score=404.37 Aligned_cols=418 Identities=37% Similarity=0.604 Sum_probs=340.9
Q ss_pred ceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcccc
Q 011766 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (478)
Q Consensus 19 ~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~ 98 (478)
.+++|+|++|+++++ ..+.+++|+|++|+|++|++... ....++||+.|++|+|||||+|+|+.++.+++..
T Consensus 2 ~~~~~~~~~i~~~~~--~~~~~~~v~v~~g~I~~i~~~~~------~~~~~~id~~g~~v~PG~vd~H~H~~~~~~~g~~ 73 (430)
T PRK06038 2 ADIIIKNAYVLTMDA--GDLKKGSVVIEDGTITEVSESTP------GDADTVIDAKGSVVMPGLVNTHTHAAMTLFRGYA 73 (430)
T ss_pred CCEEEEccEEEECCC--CeeeccEEEEECCEEEEecCCCC------CCCCEEEeCCCCEEecCeeecccCcchhhhhhcc
Confidence 468899999998763 34677899999999999997532 1245799999999999999999999999888877
Q ss_pred CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCHHHHHHHHHHhCCeEEEecccccCCCCCC
Q 011766 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLP 178 (478)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 178 (478)
.+.++.+|+....++....+++++.+...+..+.+++++|+||++|... ......+.....|++...+....+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~~-~~~~~~~a~~~~GiR~~~~~~~~d~~---- 148 (430)
T PRK06038 74 DDLPLAEWLNDHIWPAEAKLTAEDVYAGSLLACLEMIKSGTTSFADMYF-YMDEVAKAVEESGLRAALSYGMIDLG---- 148 (430)
T ss_pred CCCCHHHHHHhhhhhchhcCCHHHHHHHHHHHHHHHHhcCceeEEcccc-CHHHHHHHHHHhCCeEEEEchhccCC----
Confidence 7788999998777777777888888888888999999999999999763 34556677788999987654332211
Q ss_pred CcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCC
Q 011766 179 ASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 258 (478)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~ 258 (478)
........+. ...+.++.+.....+.+...++++..+.++++.++++++.|+++|+++++|+.+.
T Consensus 149 ---~~~~~~~~l~------------~~~~~i~~~~~~~~g~v~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~ 213 (430)
T PRK06038 149 ---DDEKGEAELK------------EGKRFVKEWHGAADGRIKVMYGPHAPYTCSEEFLSKVKKLANKDGVGIHIHVLET 213 (430)
T ss_pred ---CccchHHHHH------------HHHHHHHHhcCCCCCceEEEEeCCcCccCCHHHHHHHHHHHHHcCCcEEEEcCCC
Confidence 0000111111 3445556665444567777788899999999999999999999999999999998
Q ss_pred hhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCCcHHHHHHCCCc
Q 011766 259 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADIC 337 (478)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~ 337 (478)
..+........+. .+++.+...+.++++.++.||.++++++++++++.|+.+++||.+++.. .+..|++++++.|++
T Consensus 214 ~~~~~~~~~~~G~--~~i~~l~~~g~l~~r~~~~H~~~l~~~~~~~la~~g~~v~~~P~~n~~~~~~~~p~~~~~~~Gv~ 291 (430)
T PRK06038 214 EAELNQMKEQYGM--CSVNYLDDIGFLGPDVLAAHCVWLSDGDIEILRERGVNVSHNPVSNMKLASGIAPVPKLLERGVN 291 (430)
T ss_pred HHHHHHHHHHhCC--CHHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHhcCCEEEEChHHhhhhccCCCCHHHHHHCCCe
Confidence 8766655554433 3788899999999999999999999999999999999999999998876 678999999999999
Q ss_pred EEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEE
Q 011766 338 VSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVV 417 (478)
Q Consensus 338 v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~ 417 (478)
+++|||+...+.+.+++.+|+.+....... .....+++++++|+++|.+||+++|++ .|+|++|+.||||++
T Consensus 292 v~lGtD~~~~~~~~d~~~~~~~a~~~~~~~------~~~~~~~~~~~al~~aT~~gA~~lg~~--~G~l~~G~~ADlvvl 363 (430)
T PRK06038 292 VSLGTDGCASNNNLDMFEEMKTAALLHKVN------TMDPTALPARQVLEMATVNGAKALGIN--TGMLKEGYLADIIIV 363 (430)
T ss_pred EEEeCCCCccCCCcCHHHHHHHHHHHhhhc------cCCCCcCCHHHHHHHHhHHHHHHhCCC--CCccCCCcccCEEEE
Confidence 999999866656788999998876654321 012246899999999999999999994 599999999999999
Q ss_pred cCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHHHHHH
Q 011766 418 DPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKL 474 (478)
Q Consensus 418 d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~ 474 (478)
|.+.....|..||...+++......|..||++|+++|++|+++.++..++.++.++.
T Consensus 364 d~~~~~~~p~~~~~~~~v~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~ 420 (430)
T PRK06038 364 DMNKPHLTPVRDVPSHLVYSASGSDVDTTIVDGRILMEDYKVLCMDEQDVMEDAKKA 420 (430)
T ss_pred eCCCCccCCCCChHHheeEeCCCCceeEEEECCEEEEECCeECCCCHHHHHHHHHHH
Confidence 999776778888888887777778999999999999999999999999888776653
No 10
>PRK06380 metal-dependent hydrolase; Provisional
Probab=100.00 E-value=7.4e-52 Score=405.57 Aligned_cols=410 Identities=32% Similarity=0.510 Sum_probs=333.0
Q ss_pred ceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcccc
Q 011766 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (478)
Q Consensus 19 ~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~ 98 (478)
|+++|+|++|++.++. ..+.+++|+|++|+|++||+... .++++||++|++|+|||||+|+|+.+..+++..
T Consensus 1 m~~li~~~~v~~~~~~-~~~~~~~v~i~~g~I~~ig~~~~-------~~~~viD~~g~~v~PG~Vd~H~Hl~~~~~rg~~ 72 (418)
T PRK06380 1 MSILIKNAWIVTQNEK-REILQGNVYIEGNKIVYVGDVNE-------EADYIIDATGKVVMPGLINTHAHVGMTASKGLF 72 (418)
T ss_pred CeEEEEeeEEEECCCC-ceeeeeeEEEECCEEEEecCCCC-------CCCEEEECCCCEEccCEEeeccCCCccccCCcc
Confidence 4579999999987543 35568999999999999997532 245899999999999999999999999888887
Q ss_pred CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCHHHHHHHHHHhCCeEEEecccccCCCCCC
Q 011766 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLP 178 (478)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 178 (478)
.+.++.+|+.. .++....+++++.+......+.+++++||||+.|+.. ......+.....|++.+.+...++....
T Consensus 73 ~~~~l~~~~~~-~~~~~~~~~~e~~~~~~~~~~~e~l~~G~Tt~~d~~~-~~~~~~~a~~~~G~r~~~~~~~~~~~~~-- 148 (418)
T PRK06380 73 DDVDLEEFLMK-TFKYDSKRTREGIYNSAKLGMYEMINSGITAFVDLYY-SEDIIAKAAEELGIRAFLSWAVLDEEIT-- 148 (418)
T ss_pred cCCCHHHHHHH-HHhhhhcCCHHHHHHHHHHHHHHHHhcCCeEEEcccc-ChHHHHHHHHHhCCeEEEecccccCCcc--
Confidence 77888999986 6777788899988888889999999999999999753 3456677889999999887665542110
Q ss_pred CcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCC
Q 011766 179 ASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 258 (478)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~ 258 (478)
. ....... ...+.++++.. ...++..+++++.+.++++.+++++++|+++|+++++|+.+.
T Consensus 149 ----~-~~~~~~~------------~~~~~~~~~~~--~~~v~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~ 209 (418)
T PRK06380 149 ----T-QKGDPLN------------NAENFIREHRN--EELVTPSIGVQGIYVANDETYLKAKEIAEKYDTIMHMHLSET 209 (418)
T ss_pred ----c-ccchHHH------------HHHHHHHHhcC--CCCeEEEEECCCCccCCHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 0 0000011 34445555432 356777888999999999999999999999999999999987
Q ss_pred hhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-c-CCCcHHHHHHCCC
Q 011766 259 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-L-GFAPIKEMLHADI 336 (478)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~-~~~~~~~~~~~gv 336 (478)
..+........+ ..+++.+...+.+..+.++.|+.++++++++++++.|+.+++||.++++. . +..|+++++++|+
T Consensus 210 ~~~~~~~~~~~g--~~~ie~~~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~l~~~g~~p~~~~~~~Gv 287 (418)
T PRK06380 210 RKEVYDHVKRTG--ERPVEHLEKIGFLNSKLIAAHCVWATYHEIKLLSKNGVKVSWNSVSNFKLGTGGSPPIPEMLDNGI 287 (418)
T ss_pred HHHHHHHHHHhC--CCHHHHHHHCCCCCCCeEEEEeecCCHHHHHHHHHcCCEEEECHHHHHhhccCCCCcHHHHHHCCC
Confidence 654433333333 44788999999999999999999999999999999999999999999876 3 6899999999999
Q ss_pred cEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEE
Q 011766 337 CVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVV 416 (478)
Q Consensus 337 ~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv 416 (478)
++++|||+...+++.+++.+|+.+....+... .....++++++|+++|.++|++||+ +.|+|++||.||||+
T Consensus 288 ~v~lGTD~~~~~~~~d~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~aT~~gA~~lg~--~~G~l~~G~~ADlvv 359 (418)
T PRK06380 288 NVTIGTDSNGSNNSLDMFEAMKFSALSVKNER------WDASIIKAQEILDFATINAAKALEL--NAGSIEVGKLADLVI 359 (418)
T ss_pred eEEEcCCCCcCCCCcCHHHHHHHHHHHhhhcc------CCCCcCCHHHHHHHHHHHHHHHhCC--CCCccCCCccCCEEE
Confidence 99999998665567889999987665432111 1122489999999999999999999 379999999999999
Q ss_pred EcCCCCCCCC--cCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHH
Q 011766 417 VDPFSWPMVP--VHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQ 469 (478)
Q Consensus 417 ~d~~~~~~~~--~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~ 469 (478)
+|.+.+...| ..||+..+++.....+|..||++|++++++|++++++.++++.
T Consensus 360 ~d~~~~~~~p~~~~~~~~~lv~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~ 414 (418)
T PRK06380 360 LDARAPNMIPTRKNNIVSNIVYSLNPLNVDHVIVNGKILKENGRLNGFNPDEFID 414 (418)
T ss_pred EeCCCCccCCCCccChHHheeecCCCCceeEEEECCEEEEECCeECccCHHHHhh
Confidence 9998666666 4688998888888889999999999999999999999888764
No 11
>PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed
Probab=100.00 E-value=1.6e-51 Score=406.49 Aligned_cols=427 Identities=30% Similarity=0.478 Sum_probs=335.4
Q ss_pred eEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccc--c
Q 011766 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI--A 98 (478)
Q Consensus 21 ~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~--~ 98 (478)
+++.|+.|+|+++...++.+++|+|+||+|++|++..+.+ ..+.++||++|++|+|||||+|+|+++...++. .
T Consensus 4 ~i~~~~~v~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~----~~~~~vID~~g~~v~PGlVn~H~H~~~~~~~g~~~~ 79 (451)
T PRK08203 4 WIKNPLAIVTMDAARREIADGGLVVEGGRIVEVGPGGALP----QPADEVFDARGHVVTPGLVNTHHHFYQTLTRALPAA 79 (451)
T ss_pred EEEeccEEEEeCCCceEeeccEEEEECCEEEEEeCCccCC----CCCCeEEeCCCCEEecceEeccccccchhccccccc
Confidence 3445579999887656789999999999999999864421 125689999999999999999999999888876 5
Q ss_pred CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc-------CHHHHHHHHHHhCCeEEEecccc
Q 011766 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-------HVSEMAKAVELLGLRACLVQSTM 171 (478)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~ 171 (478)
.+.++.+|+.. .++....+++++.+......+.+++++||||+++++.. ......+.....|++...+...+
T Consensus 80 ~~~~~~~~~~~-~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~ 158 (451)
T PRK08203 80 QDAELFPWLTT-LYPVWARLTPEMVRVATQTALAELLLSGCTTSSDHHYLFPNGLRDALDDQIEAAREIGMRFHATRGSM 158 (451)
T ss_pred CCCcHHHHHHH-HhHHHHhCCHHHHHHHHHHHHHHHHhcCcCEEEcceeeccccccchHHHHHHHHHHcCCeEEEeccee
Confidence 66788899865 35556678888888888999999999999999997522 14456778899999998776554
Q ss_pred cCCCCC---CCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCC-CCCeEEEEeccccccCCHHHHHHHHHHHHHc
Q 011766 172 DCGEGL---PASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAA-DGRIRIWFGIRQIMNATDRLLLETRDMAREF 247 (478)
Q Consensus 172 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~ 247 (478)
+..... ++........+..+ ...+.++++.... .+.++..++++..++++++.+.++++.|+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~l~------------~~~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~A~~~ 226 (451)
T PRK08203 159 SLGESDGGLPPDSVVEDEDAILA------------DSQRLIDRYHDPGPGAMLRIALAPCSPFSVSRELMRESAALARRL 226 (451)
T ss_pred ecCCccCCCCccccccCHHHHHH------------HHHHHHHHhcCCCCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHc
Confidence 332111 11000000111111 3444555543322 2578877888888899999999999999999
Q ss_pred CCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCC
Q 011766 248 KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFA 326 (478)
Q Consensus 248 ~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~ 326 (478)
|+++++|+.+...+........+ ..+++.+...+.++++.++.|+.++++++++++++.|+.+++||.++.+. .+..
T Consensus 227 g~~v~~H~~e~~~~~~~~~~~~g--~~~~~~l~~~g~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~~P~~~~~l~~~~~ 304 (451)
T PRK08203 227 GVRLHTHLAETLDEEAFCLERFG--MRPVDYLEDLGWLGPDVWLAHCVHLDDAEIARLARTGTGVAHCPCSNMRLASGIA 304 (451)
T ss_pred CCcEEEEeCCCHHHHHHHHHHhC--CCHHHHHHHcCCCCCCeEEEEEeCCCHHHHHHHHhcCCeEEECcHHhhhhccCCC
Confidence 99999999888776655554333 34678889999999999999999999999999999999999999998776 6789
Q ss_pred cHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcccc
Q 011766 327 PIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSL 406 (478)
Q Consensus 327 ~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l 406 (478)
|++.+++.|+++++|||++..+...+++.+++.+........ ..+.+++.++++++|.+||+++|++ ++|+|
T Consensus 305 ~~~~~~~~Gv~v~lGtD~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~~~~l~~~T~~~A~~lg~~-~~G~l 376 (451)
T PRK08203 305 PVRELRAAGVPVGLGVDGSASNDGSNLIGEARQALLLQRLRY-------GPDAMTAREALEWATLGGARVLGRD-DIGSL 376 (451)
T ss_pred CHHHHHHCCCeEEEecCCCccCCCcCHHHHHHHHHHHhhccc-------CCCCCCHHHHHHHHHHHHHHHhCCC-CCCCc
Confidence 999999999999999998665456789998887665443110 1235899999999999999999996 68999
Q ss_pred ccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHHHHHHh
Q 011766 407 EAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLL 475 (478)
Q Consensus 407 ~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~ 475 (478)
++|+.|||+|+|.+.+...+..||+..+++.. ..+|..||++|++||++|++++.+..++.+..+++.
T Consensus 377 ~~G~~ADlvv~d~~~~~~~~~~~p~~~l~~~~-~~~v~~v~v~G~~v~~~~~~~~~d~~~~~~~~~~~~ 444 (451)
T PRK08203 377 APGKLADLALFDLDELRFAGAHDPVAALVLCG-PPRADRVMVGGRWVVRDGQLTTLDLAALIARHRAAA 444 (451)
T ss_pred CCCCccCEEEEcCCccccCCccChHHHHHccC-CCCccEEEECCEEEEECCcccCCCHHHHHHHHHHHH
Confidence 99999999999999776666778887776543 578999999999999999999999998887776653
No 12
>PRK08393 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=3.6e-51 Score=400.01 Aligned_cols=419 Identities=32% Similarity=0.538 Sum_probs=341.3
Q ss_pred ceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcccc
Q 011766 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (478)
Q Consensus 19 ~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~ 98 (478)
++++|+|++|+++++ ....+++|+|+||+|++|++.... ++.++||+.|++|+|||||+|+|+.+..+++..
T Consensus 1 ~~~~i~~~~i~~~~~--~~~~~~~i~i~~g~I~~v~~~~~~------~~~~~id~~~~~v~Pg~vd~H~H~~~~~~rg~~ 72 (424)
T PRK08393 1 MSILIKNGYVIYGEN--LKVIRADVLIEGNKIVEVKRNINK------PADTVIDASGSVVSPGFINAHTHSPMVLLRGLA 72 (424)
T ss_pred CeEEEECcEEEeCCC--CceecceEEEECCEEEEecCCCCC------CCCeEEeCCCCEEccCeeeeccCcchHhhhhcc
Confidence 468999999998653 345678999999999999874321 245799999999999999999999999888888
Q ss_pred CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCHHHHHHHHHHhCCeEEEecccccCCCCCC
Q 011766 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLP 178 (478)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 178 (478)
.+.++.+|+....++....+++++.+......+.+++++|+||+.++. .......+.....|++.+......+... +
T Consensus 73 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~-~~~~~~~~a~~~~G~r~~~~~~~~~~~~--~ 149 (424)
T PRK08393 73 DDVPLMEWLQNYIWPRERKLKRKDIYWGAYLGLLEMIKSGTTTFVDMY-FHMEEVAKATLEVGLRGYLSYGMVDLGD--E 149 (424)
T ss_pred CCCCHHHHHHhhhccccccCCHHHHHHHHHHHHHHHHhcCceEEeccc-cCHHHHHHHHHHhCCeEEEeceEecCCC--c
Confidence 888999999888888777788888888889999999999999999975 3456677788889999877644332110 0
Q ss_pred CcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCC
Q 011766 179 ASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 258 (478)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~ 258 (478)
......+. ...+.++.+.....+.+...++++..+.++++.+++++++|+++|+++++|+.+.
T Consensus 150 -----~~~~~~l~------------~~~~~~~~~~~~~~~~v~~~~~p~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~ 212 (424)
T PRK08393 150 -----EKREKEIK------------ETEKLMEFIEKLNSPRVHFVFGPHAPYTCSLALLKWVREKAREWNKLITIHLSET 212 (424)
T ss_pred -----cchHHHHH------------HHHHHHHHHhcCCCCceEEEEeCCcCCcCCHHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 00011111 3333444444444456776678888888999999999999999999999999998
Q ss_pred hhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCCcHHHHHHCCCc
Q 011766 259 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADIC 337 (478)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~ 337 (478)
..+.......++ ..++..+...+.++++.++.||.++++++++++++.|+.+++||.++.+. .+..|+++++++|++
T Consensus 213 ~~~~~~~~~~~g--~~~~~~l~~~G~l~~~~~~~H~~~l~~~~l~~la~~g~~v~~~P~sn~~lg~g~~~~~~~~~~Gv~ 290 (424)
T PRK08393 213 MDEIKQIREKYG--KSPVVLLDEIGFLNEDVIAAHGVWLSSRDIRILASAGVTVAHNPASNMKLGSGVMPLRKLLNAGVN 290 (424)
T ss_pred HHHHHHHHHHhC--cCHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHhcCCEEEECHHHHHhhccCCCCHHHHHHCCCc
Confidence 877776666554 34788899999999999999999999999999999999999999998876 678999999999999
Q ss_pred EEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEE
Q 011766 338 VSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVV 417 (478)
Q Consensus 338 v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~ 417 (478)
+++|||+...+.+.+++++++.+........ .....++++++++++|.+||+.+|++ .|+|++|+.||||++
T Consensus 291 v~lGtD~~~~~~~~d~~~~~~~a~~~~~~~~------~~~~~~~~~~al~~aT~~~A~~lg~~--~G~l~~G~~ADlvvl 362 (424)
T PRK08393 291 VALGTDGAASNNNLDMLREMKLAALLHKVHN------LDPTIADAETVFRMATQNGAKALGLK--AGVIKEGYLADIAVI 362 (424)
T ss_pred EEEecCCCccCCchhHHHHHHHHHHHHhhcc------CCCCcCCHHHHHHHHHHHHHHHhCCC--CCccCCCCccCEEEE
Confidence 9999998665556789999987764432110 11123689999999999999999994 599999999999999
Q ss_pred cCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHHHHHHh
Q 011766 418 DPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLL 475 (478)
Q Consensus 418 d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~ 475 (478)
|.+.....|..||+..+++.....+|..|||+|+++|++|+++..+.+++.++.+++.
T Consensus 363 d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~~ 420 (424)
T PRK08393 363 DFNRPHLRPINNPISHLVYSANGNDVETTIVDGKIVMLDGEVLTLDEEKILDKFLKVI 420 (424)
T ss_pred eCCCCCcCCCCChHHHeeeeCCCCCeeEEEECCEEEEECCeECCCCHHHHHHHHHHHH
Confidence 9997777788899998888777889999999999999999999999999998877664
No 13
>PRK06151 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=1.3e-50 Score=402.03 Aligned_cols=430 Identities=24% Similarity=0.323 Sum_probs=326.1
Q ss_pred ceeEEEecEEEeeCCCC-ceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccc
Q 011766 19 STMILHNAVIVTMDKES-RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (478)
Q Consensus 19 ~~~~i~n~~I~t~d~~~-~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~ 97 (478)
|+++|+|+.|++.++.. .++++++|+|+||+|++||+... ....++||++|++|+|||||+|+|+.+......
T Consensus 1 ~~~li~~~~v~~~d~~~~~~~~~~~VlVe~g~I~~Vg~~~~------~~~~~viD~~g~~vlPGlVdaH~Hl~~~~~~~~ 74 (488)
T PRK06151 1 MRTLIKARWVLGFDDGDHRLLRDGEVVFEGDRILFVGHRFD------GEVDRVIDAGNALVGPGFIDLDALSDLDTTILG 74 (488)
T ss_pred CeEEEEccEEEEEcCCCCeEEeCcEEEEECCEEEEecCCCC------CCCCeEEeCCCCEEecCEEeeecccchhhhhcc
Confidence 36899999999887653 46789999999999999997432 124579999999999999999999865332221
Q ss_pred cCCCCchHHhhhccccc-------cCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc----------CHHHHHHHHHHh
Q 011766 98 ADDVDLMTWLHDRIWPY-------ESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----------HVSEMAKAVELL 160 (478)
Q Consensus 98 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~----------~~~~~~~~~~~~ 160 (478)
.. +...|+.+..|+. ...+++++.+......+.+++++||||++|+++. ......+.....
T Consensus 75 ~~--~~~~~~~~~~~~~~~~~~~~~~~~t~e~~~~~a~~~~~e~L~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~a~~~~ 152 (488)
T PRK06151 75 LD--NGPGWAKGRVWSRDYVEAGRREMYTPEELAFQKRYAFAQLLRNGITTAMPIASLFYRQWAETYAEFAAAAEAAGRL 152 (488)
T ss_pred cc--cchhHHhcccCchhhhhcchhhcCCHHHHHHHHHHHHHHHHhcCeeEEehhhhhhccccccccchHHHHHHHHHHc
Confidence 11 1225654444432 1357888888888999999999999999986432 124456667788
Q ss_pred CCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHH
Q 011766 161 GLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLET 240 (478)
Q Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 240 (478)
|++.+.+...+..+...... ...... .. .........+..+.++++...+.+.++.+..++..+.++++.+.++
T Consensus 153 GiR~~~~~~~~~~~~~~~~~--g~~~~~-~~---~~~~~~~~~~~~~~v~~~~~~g~~~i~~~~~p~~~~~~s~e~l~~~ 226 (488)
T PRK06151 153 GLRVYLGPAYRSGGSVLEAD--GSLEVV-FD---EARGLAGLEEAIAFIKRVDGAHNGLVRGMLAPDRIETCTVDLLRRT 226 (488)
T ss_pred CCeEEecchhccCccccccC--CCCCcc-cc---chhHHHHHHHHHHHHHHhhcccCCceEEEEcCCCCCCCCHHHHHHH
Confidence 99987775443322111000 000000 00 0000000114556667766666677888888888888999999999
Q ss_pred HHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCCh---------hHHHHHHhcCCe
Q 011766 241 RDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH---------TEIGLLSRAGVK 311 (478)
Q Consensus 241 ~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~---------~~~~~~~~~~~~ 311 (478)
+++|+++|+++++|+.+...+.+.+....+ ...++.+...+.++.++++.||.++++ ++++++++.|+.
T Consensus 227 ~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g--~~~~~~~~~~g~l~~r~~l~H~~~l~~~~~~~~~~~~~~~~la~~g~~ 304 (488)
T PRK06151 227 AAAARELGCPVRLHCAQGVLEVETVRRLHG--TTPLEWLADVGLLGPRLLIPHATYISGSPRLNYSGGDDLALLAEHGVS 304 (488)
T ss_pred HHHHHHCCCcEEEEECCchHHHHHHHHHcC--CCHHHHHHHcCCCCCCcEEEEEEEcCCccccccCCHHHHHHHHhcCCE
Confidence 999999999999999887666555544333 346788888999999999999999999 999999999999
Q ss_pred EEECccchhhc-cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHh
Q 011766 312 VSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMAT 390 (478)
Q Consensus 312 ~~~~p~~~~~~-~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T 390 (478)
+++||..+.+. .+..|++++++.|+++++|||+.+ .+++..++.+........ .....++++++++++|
T Consensus 305 v~~~P~~~~~~g~~~~p~~~l~~~Gv~v~lGtD~~~----~~~~~~~~~~~~~~~~~~------~~~~~~~~~~al~~aT 374 (488)
T PRK06151 305 IVHCPLVSARHGSALNSFDRYREAGINLALGTDTFP----PDMVMNMRVGLILGRVVE------GDLDAASAADLFDAAT 374 (488)
T ss_pred EEECchhhhhhccccccHHHHHHCCCcEEEECCCCC----ccHHHHHHHHHHHHHHhc------CCCCCCCHHHHHHHHH
Confidence 99999887765 678999999999999999999732 478888877664432110 0123489999999999
Q ss_pred HHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHH
Q 011766 391 INGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQL 470 (478)
Q Consensus 391 ~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~ 470 (478)
.+||+++|+++ +|+|++|+.|||+|+|.+.+...|..||+..+++..+..+|..||++|++||++|+++.++.+++.+.
T Consensus 375 ~~~A~~lg~~~-~G~I~~G~~ADlvvld~~~~~~~~~~d~~~~lv~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~ 453 (488)
T PRK06151 375 LGGARALGRDD-LGRLAPGAKADIVVFDLDGLHMGPVFDPIRTLVTGGSGRDVRAVFVDGRVVMEDGRLPGVDLAALRAQ 453 (488)
T ss_pred HHHHHHhCCCC-CcccCCCCcCCEEEEeCCccccCCccCHHHHHHhhCCCCCccEEEECCEEEEECCeecCCCHHHHHHH
Confidence 99999999965 79999999999999999988888888999998888878899999999999999999999999999877
Q ss_pred HHHHh
Q 011766 471 QDKLL 475 (478)
Q Consensus 471 ~~~~~ 475 (478)
.++..
T Consensus 454 ~~~~~ 458 (488)
T PRK06151 454 AQQQF 458 (488)
T ss_pred HHHHH
Confidence 76543
No 14
>PRK09228 guanine deaminase; Provisional
Probab=100.00 E-value=8.1e-50 Score=389.93 Aligned_cols=408 Identities=24% Similarity=0.328 Sum_probs=319.3
Q ss_pred eeEEEecEEE-eeC-------CCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccch
Q 011766 20 TMILHNAVIV-TMD-------KESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (478)
Q Consensus 20 ~~~i~n~~I~-t~d-------~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~ 91 (478)
.++|++..++ +.. +...++++++|+|+||+|++||+..+....++ ..+++||++|++|+|||||+|+|+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~I~~g~I~~Vg~~~~~~~~~~-~~~~viD~~g~lv~PGlVn~H~H~~~ 81 (433)
T PRK09228 3 TKAYRGRLLHFTADPAEVDDEDALRYIEDGLLLVEDGRIVAAGPYAELRAQLP-ADAEVTDYRGKLILPGFIDTHIHYPQ 81 (433)
T ss_pred eEEEEEEEEccCCCccccCCCCcEEEECCeEEEEECCEEEEEcChHHhhhhcC-CCCeEEeCCCCEEecceecccccccc
Confidence 4677766666 223 23457789999999999999998654322222 13589999999999999999999988
Q ss_pred hhhccccCCCCchHHhhhccccccCCC-ChHHHHHHHHHHHHHHHhcCcceeecCCccC---HHHHHHHHHHhCCeEEEe
Q 011766 92 QLAKGIADDVDLMTWLHDRIWPYESNM-TEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLRACLV 167 (478)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~---~~~~~~~~~~~g~~~~~~ 167 (478)
+.+++. .+.++.+|+....|+.+..+ +++..+......+.+++++||||+.+++... .....+.....|++.+.+
T Consensus 82 ~~~~g~-~~~~l~~wl~~~~~~~e~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~a~~~~GiR~~~~ 160 (433)
T PRK09228 82 TDMIAS-YGEQLLDWLNTYTFPEERRFADPAYAREVAEFFLDELLRNGTTTALVFGTVHPQSVDALFEAAEARNMRMIAG 160 (433)
T ss_pred hhhccC-CchHHHHHHHhhhhHHHHHhCCHHHHHHHHHHHHHHHHhCCceEEEeccccCHHHHHHHHHHHHHcCCeEEee
Confidence 877663 23467889987777766543 5556666777788999999999999975443 345567778899999887
Q ss_pred cccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHc
Q 011766 168 QSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 247 (478)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~ 247 (478)
...++.. .+..+ ........+ ...++++++.. .+.+...+.++..++++++.++++.++|+++
T Consensus 161 ~~~~~~~--~~~~~-~~~~~~~l~------------~~~~~~~~~~~--~~~~~~~~~p~~~~t~s~~~l~~~~~lA~~~ 223 (433)
T PRK09228 161 KVLMDRN--APDGL-RDTAESGYD------------DSKALIERWHG--KGRLLYAITPRFAPTSTPEQLEAAGALAREH 223 (433)
T ss_pred eeeecCC--CCccc-ccCHHHHHH------------HHHHHHHHHhC--CCCceEEEECCcCCcCCHHHHHHHHHHHHHC
Confidence 6555431 11110 001111111 34455566544 2467777889999999999999999999998
Q ss_pred -CCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCC
Q 011766 248 -KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGF 325 (478)
Q Consensus 248 -~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~ 325 (478)
++++++|+.+...+...+...++....+++.++..+.++++.++.||.++++++++++++.|+.+++||.+++.+ .+.
T Consensus 224 ~~~~i~~Hl~E~~~e~~~~~~~~g~~~~~~~~l~~~G~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~~P~sn~~lg~g~ 303 (433)
T PRK09228 224 PDVWIQTHLSENLDEIAWVKELFPEARDYLDVYERYGLLGPRAVFAHCIHLEDRERRRLAETGAAIAFCPTSNLFLGSGL 303 (433)
T ss_pred CCCceEEeecCChhHHHHHHHHcCCCCCHHHHHHHcCCCCCCeEEEeccCCCHHHHHHHHHcCCeEEECCccHHhhcCCC
Confidence 999999999998888777776665555788999999999999999999999999999999999999999999876 688
Q ss_pred CcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccc
Q 011766 326 APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGS 405 (478)
Q Consensus 326 ~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~ 405 (478)
.|+++++++|+++++|||+.. +++.+++++|+.+....+. ...+++.+++|+++|.+||+++|+++++|+
T Consensus 304 ~~~~~~~~~Gv~v~lGtD~~~-~~~~d~~~~~~~~~~~~~~---------~~~~~~~~~~l~~aT~~~A~~lg~~~~~G~ 373 (433)
T PRK09228 304 FDLKRADAAGVRVGLGTDVGG-GTSFSMLQTMNEAYKVQQL---------QGYRLSPFQAFYLATLGGARALGLDDRIGN 373 (433)
T ss_pred cCHHHHHHCCCeEEEecCCCC-CCCCCHHHHHHHHHHHhhc---------ccCCCCHHHHHHHHhHHHHHHhCCCCCCcc
Confidence 999999999999999999854 3567899999887655431 123589999999999999999999878899
Q ss_pred cccCccccEEEEcCCCCC-CC-------CcCChhhhhhhccCCCCeeEEEEccEEEEEC
Q 011766 406 LEAGKKADMVVVDPFSWP-MV-------PVHDRITSLVYCMRTENVVSVMCNGQWVMKN 456 (478)
Q Consensus 406 l~~G~~ADlvv~d~~~~~-~~-------~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~ 456 (478)
|++||.||||++|.+... .. +..||+..+++......|..|||+|++|+++
T Consensus 374 l~~Gk~ADlvv~d~~~~~~~~~~~~~~~~~~d~~~~lv~~~~~~~V~~v~VdG~~v~~~ 432 (433)
T PRK09228 374 LAPGKEADFVVLDPAATPLLALRTARAESLEELLFALMTLGDDRAVAETYVAGRPVYRR 432 (433)
T ss_pred cCCCCCCCEEEEcCCCCccccchhcccCCHHHHHHHHhhcCCccceeEEEECCEEeccC
Confidence 999999999999987532 22 2357899999999999999999999999864
No 15
>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.
Probab=100.00 E-value=2.3e-49 Score=389.72 Aligned_cols=410 Identities=41% Similarity=0.662 Sum_probs=317.6
Q ss_pred eEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCC
Q 011766 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (478)
Q Consensus 21 ~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~ 100 (478)
++|+|++|+++++ .+.+++++|+|+||||++|++..+.+ . ....++||++|++|+|||||+|+|+.++..++....
T Consensus 1 ~~i~~~~v~~~~~-~~~~~~~~v~i~~g~I~~ig~~~~~~--~-~~~~~viD~~g~~i~PGlid~H~Hl~~~~~~~~~~~ 76 (411)
T cd01298 1 ILIRNGTIVTTDP-RRVLEDGDVLVEDGRIVAVGPALPLP--A-YPADEVIDAKGKVVMPGLVNTHTHLAMTLLRGLADD 76 (411)
T ss_pred CeEEeeEEEEeCC-cceeecceEEEECCEEEEecCccccc--c-CCcCeEEeCCCCEEccCccccccchhhHHhhcccCC
Confidence 4799999998765 46778999999999999999764321 0 135689999999999999999999988777665555
Q ss_pred CCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCHHHHHHHHHHhCCeEEEecccccCCCCCCCc
Q 011766 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (478)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 180 (478)
.++.+|+....+......+.++.+......+.+++++||||+++++........+.....|++.......+......
T Consensus 77 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~~~~--- 153 (411)
T cd01298 77 LPLMEWLKDLIWPLERLLTEEDVYLGALLALAEMIRSGTTTFADMYFFYPDAVAEAAEELGIRAVLGRGIMDLGTED--- 153 (411)
T ss_pred CCHHHHHHhhhhhhhhcCCHHHHHHHHHHHHHHHHhcCccEEECccccchHHHHHHHHHhCCeEEEEcceecCCCcc---
Confidence 66889988777766656677777777778888999999999999865433445556667788877655443321110
Q ss_pred ccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCChh
Q 011766 181 WAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 260 (478)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~ 260 (478)
........+ +..+.++++...+.+.+++..+++..+..+++.+.++++.|+++|+++.+|+.+...
T Consensus 154 --~~~~~~~~~------------~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~ 219 (411)
T cd01298 154 --VEETEEALA------------EAERLIREWHGAADGRIRVALAPHAPYTCSDELLREVAELAREYGVPLHIHLAETED 219 (411)
T ss_pred --cccHHHHHH------------HHHHHHHHhcCCCCCceEEEEeCCCCccCCHHHHHHHHHHHHHcCCcEEEEecCCHH
Confidence 000111111 444556665554566778778877777789999999999999999999999988776
Q ss_pred hhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCCcHHHHHHCCCcEE
Q 011766 261 ENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVS 339 (478)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~v~ 339 (478)
..+......+. ..++.+...+.++.+..+.|+.++++++++++++.|+.+++||..+... ....|+++++++|++++
T Consensus 220 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~H~~~l~~~~~~~l~~~gi~~~~~p~~~~~~~~~~~~~~~~~~~Gv~~~ 297 (411)
T cd01298 220 EVEESLEKYGK--RPVEYLEELGLLGPDVVLAHCVWLTDEEIELLAETGTGVAHNPASNMKLASGIAPVPEMLEAGVNVG 297 (411)
T ss_pred HHHHHHHHhCC--CHHHHHHHcCCCCCCeEEEEecCCCHHHHHHHHHcCCeEEEChHHhhhhhhCCCCHHHHHHCCCcEE
Confidence 55544443332 2556666777778888999999999999999999999999999988765 46789999999999999
Q ss_pred EcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcC
Q 011766 340 LGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDP 419 (478)
Q Consensus 340 ~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~ 419 (478)
+|||++....+.+++.+++.+....... ...+++++++++++++|.|||+++|++ ++|+|++|+.|||||+|.
T Consensus 298 ~GsD~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~al~~~T~~~A~~lg~~-~~G~i~~G~~ADlvv~d~ 370 (411)
T cd01298 298 LGTDGAASNNNLDMFEEMRLAALLQKLA------HGDPTALPAEEALEMATIGGAKALGLD-EIGSLEVGKKADLILIDL 370 (411)
T ss_pred EeCCCCccCCCcCHHHHHHHHHHHhccc------cCCCCcCCHHHHHHHHHhhHHHHhCCc-cCCCcCCCccCCEEEEeC
Confidence 9999876545678888887765543211 112236999999999999999999997 789999999999999999
Q ss_pred CCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeee
Q 011766 420 FSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKIL 460 (478)
Q Consensus 420 ~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~ 460 (478)
+.+...+.+|+++.+.+.....+|..||++|++||++|+++
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~ 411 (411)
T cd01298 371 DGPHLLPVHDPISHLVYSANGGDVDTVIVNGRVVMEDGELL 411 (411)
T ss_pred CCCccCCccchhhHheEecCCCCeeEEEECCEEEEECCEeC
Confidence 97777777788887766666789999999999999999874
No 16
>cd01303 GDEase Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool.
Probab=100.00 E-value=2.4e-49 Score=386.95 Aligned_cols=402 Identities=25% Similarity=0.363 Sum_probs=317.2
Q ss_pred EEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCCCCchHHh
Q 011766 28 IVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWL 107 (478)
Q Consensus 28 I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~ 107 (478)
..|+|....++++++|+|+||+|++||+..+.....+ .++++||++|++|+|||||+|+|+.+..+++...+.++.+|+
T Consensus 14 ~~~~d~~~~~~~~g~V~v~~g~I~~vG~~~~~~~~~~-~~~~viD~~g~~v~PGlVn~H~Hl~~~~~rg~~~~~~l~~wl 92 (429)
T cd01303 14 LELVEDALRVVEDGLIVVVDGNIIAAGAAETLKRAAK-PGARVIDSPNQFILPGFIDTHIHAPQYANIGSGLGEPLLDWL 92 (429)
T ss_pred ccccCCcEEEECCeEEEEECCEEEEeCchhhhhhhcC-CCceEEcCCCCEEecceeeeeecccccccccccCCCcHHHHH
Confidence 4456777788899999999999999998654321111 246899999999999999999999988888887788899999
Q ss_pred hhccccccCC-CChHHHHHHHHHHHHHHHhcCcceeecCCccC---HHHHHHHHHHhCCeEEEecccccCCCCCCCcccc
Q 011766 108 HDRIWPYESN-MTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAV 183 (478)
Q Consensus 108 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 183 (478)
....|+.+.. .+.++.+......+.+++++||||+++++... .....+.....|++.+.+...++... +..+ .
T Consensus 93 ~~~~~~~e~~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~~~~~--~~~~-~ 169 (429)
T cd01303 93 ETYTFPEEAKFADPAYAREVYGRFLDELLRNGTTTACYFATIHPESTEALFEEAAKRGQRAIAGKVCMDRNA--PEYY-R 169 (429)
T ss_pred HhhhhHHHHhcCCHHHHHHHHHHHHHHHHhCCceEEEeecccChhHHHHHHHHHHHhCCeEEEeeeeecCCC--Cccc-c
Confidence 8777776654 35556666677788999999999999976432 34566777889999988765543211 1000 0
Q ss_pred cCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcC-CceeEeccCChhhh
Q 011766 184 RTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK-TGIHMHVAEIPYEN 262 (478)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~-~~v~~H~~~~~~~~ 262 (478)
........ ...++++++... .+.+...++++..++++++.++++.++|+++| +++++|+.+...+.
T Consensus 170 ~~~~~~~~------------~~~~~i~~~~~~-~~~v~~~~~p~~~~~~s~e~l~~~~~~A~~~g~~~v~~H~~e~~~e~ 236 (429)
T cd01303 170 DTAESSYR------------DTKRLIERWHGK-SGRVKPAITPRFAPSCSEELLAALGKLAKEHPDLHIQTHISENLDEI 236 (429)
T ss_pred cCHHHHHH------------HHHHHHHHHhCc-CCceEEEEecCcCCcCCHHHHHHHHHHHHHCCCCeEEEeeCCCHHHH
Confidence 00011111 344555665543 35677778889999999999999999999999 99999999888777
Q ss_pred HHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCCcHHHHHHCCCcEEEc
Q 011766 263 QVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLG 341 (478)
Q Consensus 263 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~v~~g 341 (478)
+.+....+....+++.+...+.++.+.++.||.++++++++++++.|+.+++||.+++.+ .+..|+++++++|+++++|
T Consensus 237 ~~~~~~~g~~~~p~~~l~~~G~l~~~~~l~H~~~l~~~~~~~l~~~g~~v~~~P~sn~~l~~g~~~~~~~~~~Gv~v~lG 316 (429)
T cd01303 237 AWVKELFPGARDYLDVYDKYGLLTEKTVLAHCVHLSEEEFNLLKERGASVAHCPTSNLFLGSGLFDVRKLLDAGIKVGLG 316 (429)
T ss_pred HHHHHHcCCCCCHHHHHHHCCCCCCCcEEEeCCCCCHHHHHHHHHcCCEEEECccchhhhccCCCCHHHHHHCCCeEEEe
Confidence 766665553356889999999999999999999999999999999999999999999876 6789999999999999999
Q ss_pred CCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCC
Q 011766 342 TDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFS 421 (478)
Q Consensus 342 sD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~ 421 (478)
||+... ++.+++++|+.+....+... .......+++.+++|+++|.+||+++|+++++|+|++||.||||++|.++
T Consensus 317 tD~~~~-~~~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~al~~aT~~gA~~lg~~~~~Gsle~Gk~ADlvvld~~~ 392 (429)
T cd01303 317 TDVGGG-TSFSMLDTLRQAYKVSRLLG---YELGGHAKLSPAEAFYLATLGGAEALGLDDKIGNFEVGKEFDAVVIDPSA 392 (429)
T ss_pred ccCCCC-CCccHHHHHHHHHHHHHhhc---cccCCcCCCCHHHHHHHHhhHHHHHcCCCCCCcCcCCCCccCEEEEcCCC
Confidence 998644 56789999987765432111 01113456899999999999999999998889999999999999999986
Q ss_pred CCCC-Cc-------CChhhhhhhccCCCCeeEEEEcc
Q 011766 422 WPMV-PV-------HDRITSLVYCMRTENVVSVMCNG 450 (478)
Q Consensus 422 ~~~~-~~-------~d~~~~~~~~~~~~~v~~v~v~G 450 (478)
+... |. .||+..+++......|..|||+|
T Consensus 393 ~~~~~p~~~~~~~~~d~~~~lV~~~~~~~V~~v~V~G 429 (429)
T cd01303 393 TPLLADRMFRVESLEEALFKFLYLGDDRNIREVYVAG 429 (429)
T ss_pred ccccccccccccchhhHHHHHeeeCCCCCeeEEEeCC
Confidence 5333 43 68999999999999999999998
No 17
>PRK09229 N-formimino-L-glutamate deiminase; Validated
Probab=100.00 E-value=3.8e-48 Score=381.95 Aligned_cols=420 Identities=19% Similarity=0.223 Sum_probs=313.9
Q ss_pred eeEEEecEEEeeCCCCceeecceEEEEC-CEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcccc
Q 011766 20 TMILHNAVIVTMDKESRVFRNGGVFVVQ-DRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (478)
Q Consensus 20 ~~~i~n~~I~t~d~~~~~~~~~~v~I~~-G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~ 98 (478)
.++++++.+. ++ +..+++|+|+| |+|++||+... + ..++.+|++|+|||||+|+|+.+..+++..
T Consensus 4 ~~~~~~~~~~--~~---~~~~~~v~i~~~grI~~vg~~~~-----~----~~~~~~g~~vlPGlVn~H~H~~~~~~rg~~ 69 (456)
T PRK09229 4 TLFAERALLP--DG---WARNVRLTVDADGRIAAVEPGAA-----P----AGAERLAGPVLPGMPNLHSHAFQRAMAGLT 69 (456)
T ss_pred hHHHHHhhCC--Cc---cccCcEEEEecCCeEEEecCCCC-----C----ccccccCcEEccCcccccccHhhHhhcCcc
Confidence 3455566553 32 56788999999 99999998532 0 123558999999999999999999998865
Q ss_pred CC-----CCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc--------------CHHHHHHHHHH
Q 011766 99 DD-----VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------------HVSEMAKAVEL 159 (478)
Q Consensus 99 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~--------------~~~~~~~~~~~ 159 (478)
.. .++.+|+. .+|+....+++++.+......+.+++++||||+.++... ......+..+.
T Consensus 70 ~~~~~~~~~l~~w~~-~~~~~~~~~~~e~~~~~a~~~~~e~L~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~e 148 (456)
T PRK09229 70 EVRGPPQDSFWSWRE-LMYRFALRLTPDQLEAIARQLYVEMLEAGYTSVGEFHYLHHDPDGTPYADPAEMALRIVAAARA 148 (456)
T ss_pred cccCCCCCChHHHHH-HHHHHHHhCCHHHHHHHHHHHHHHHHhhCCcEEEeeeeeccCCCCCccCChHHHHHHHHHHHHH
Confidence 42 45678875 456666778999999999999999999999999886421 12556778899
Q ss_pred hCCeEEEecccccCC-CC-CCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHH
Q 011766 160 LGLRACLVQSTMDCG-EG-LPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLL 237 (478)
Q Consensus 160 ~g~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 237 (478)
.|++..++...++.. .+ .++.. ....... ...-.....+++.+.+. ..+.+.+.++++..++++++.+
T Consensus 149 ~GiR~~~~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~~s~e~l 218 (456)
T PRK09229 149 AGIGLTLLPVLYAHSGFGGQPPNP---GQRRFIN-----DPDGFLRLLEALRRALA--ALPGARLGLAPHSLRAVTPDQL 218 (456)
T ss_pred cCCEEEeceeeeecCCCCCCCCch---hhccccc-----CHHHHHHHHHHHHHhhc--CCCceEEEEeCCCCCCCCHHHH
Confidence 999988776555432 10 11100 0000000 00000001112222222 2356788888999899999999
Q ss_pred HHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECcc
Q 011766 238 LETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPA 317 (478)
Q Consensus 238 ~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~ 317 (478)
++++++| ++|+++++|+.+...+........+ ..+++.+...+.++.++++.||.++++++++++++.|+.+++||.
T Consensus 219 ~~~~~~A-~~g~~i~~H~~e~~~e~~~~~~~~g--~~~~~~l~~~g~l~~~~~l~H~~~l~~~d~~~la~~g~~v~~~P~ 295 (456)
T PRK09229 219 AAVLALA-APDGPVHIHIAEQTKEVDDCLAWSG--ARPVEWLLDHAPVDARWCLVHATHLTDAETARLARSGAVAGLCPT 295 (456)
T ss_pred HHHHHHh-cCCCceEEEeCCCHHHHHHHHHHcC--CCHHHHHHHcCCCCCCeEEEeeccCCHHHHHHHHHcCCeEEECch
Confidence 9999999 9999999999887766666555443 346788888999999999999999999999999999999999999
Q ss_pred chhhc-cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCC-CCCCCCHHHHHHHHhHHHHH
Q 011766 318 SAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTT-DPAALPAETVLRMATINGAK 395 (478)
Q Consensus 318 ~~~~~-~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ls~~~al~~~T~~pA~ 395 (478)
+++.+ .+..|+++++++|+++++|||++. +.+++++|+.+....+........+. .++.++.+++|+++|.++|+
T Consensus 296 sn~~lg~g~~p~~~l~~~Gv~v~lGtD~~~---~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~ 372 (456)
T PRK09229 296 TEANLGDGIFPAVDYLAAGGRFGIGSDSHV---SIDLVEELRLLEYGQRLRDRRRNVLAAAAQPSVGRRLFDAALAGGAQ 372 (456)
T ss_pred hhhhhcCCCCCHHHHHHCCCeEEEecCCCC---CCCHHHHHHHHHHHHHHhhcCCcccccccccchHHHHHHHHHHHHHH
Confidence 98876 688999999999999999999743 36889999887654432111111111 12468999999999999999
Q ss_pred HcCCCCCccccccCccccEEEEcCCCCCCCCc--CChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHHHHH
Q 011766 396 SVLWDNDIGSLEAGKKADMVVVDPFSWPMVPV--HDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDK 473 (478)
Q Consensus 396 ~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~--~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~ 473 (478)
++|+ .+|+|++||.|||||+|.+.+...+. .||...+++.....+|..|||+|++||++|+++ +.+++.+..++
T Consensus 373 alg~--~~GsLe~Gk~ADlvvld~~~~~~~~~~~~~~~~~lv~~~~~~~V~~v~V~G~~v~~~g~~~--d~~~i~~~~~~ 448 (456)
T PRK09229 373 ALGR--AIGGLAVGARADLVVLDLDHPALAGREGDALLDRWVFAGGDAAVRDVWVAGRWVVRDGRHR--LREAIAAAFRA 448 (456)
T ss_pred HhCC--CcCCcCCCCccCEEEEeCCCccccCCChhhHHHHHhhcCCCCCeeEEEECCEEEEECCccC--CHHHHHHHHHH
Confidence 9999 48999999999999999986544443 588889998888899999999999999999974 66777766665
Q ss_pred H
Q 011766 474 L 474 (478)
Q Consensus 474 ~ 474 (478)
.
T Consensus 449 ~ 449 (456)
T PRK09229 449 A 449 (456)
T ss_pred H
Confidence 4
No 18
>TIGR02022 hutF formiminoglutamate deiminase. In some species, histidine utilization goes via urocanate to glutamate in four step, the last being removal of formamide. This model describes an alternate fourth step, formiminoglutamate hydrolase, which leads to N-formyl-L-glutamate. This product may be acted on by formylglutamate amidohydrolase (TIGR02017) and bypass glutamate as a product during its degradation. Alternatively, removal of formate (by EC 3.5.1.68) would yield glutamate.
Probab=100.00 E-value=2.1e-47 Score=375.39 Aligned_cols=421 Identities=19% Similarity=0.235 Sum_probs=313.6
Q ss_pred EEEecEEEeeCCCCceeecceEEEE-CCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccC-
Q 011766 22 ILHNAVIVTMDKESRVFRNGGVFVV-QDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD- 99 (478)
Q Consensus 22 ~i~n~~I~t~d~~~~~~~~~~v~I~-~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~- 99 (478)
.++|+.+- + ++.++++|+|+ ||+|++||+.... ... .+..|++|+|||||+|+|+.+..+++...
T Consensus 5 ~~~~~~~~--~---~~~~~~~i~I~~~g~I~~vg~~~~~-----~~~---~~~~g~lvlPGfVn~H~H~~~~~~rg~~~~ 71 (455)
T TIGR02022 5 WAERALLP--D---GWAEGVRIAVAADGRILAIETGVPA-----APG---AERLSGPLLPGLANLHSHAFQRAMAGLAEV 71 (455)
T ss_pred hHHhccCC--C---ccccCceEEEecCCEEEEecCCCCc-----ccc---cccCCCEEccCCcccCcchhhHhhcCCccc
Confidence 45666663 3 25577899999 9999999985321 012 23458999999999999999999988753
Q ss_pred ----CCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc--------------CHHHHHHHHHHhC
Q 011766 100 ----DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------------HVSEMAKAVELLG 161 (478)
Q Consensus 100 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~--------------~~~~~~~~~~~~g 161 (478)
+.++.+|+. ..|+....+++++.+...+..+.+++++||||+.++... ......+.....|
T Consensus 72 ~~~~~~~l~~w~~-~~~~~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~e~G 150 (455)
T TIGR02022 72 AGSGGDSFWTWRE-LMYRFVDRLTPEQLQAIARQLYVEMLEAGFTRVGEFHYLHHAPDGTPYADPAEMAERIAAAAADAG 150 (455)
T ss_pred ccCCCCCHHHHHH-HHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCEEEeeeeecccCCCccccchhhhHHHHHHHHHHhC
Confidence 236778975 456777778999999999999999999999999985311 1346677888999
Q ss_pred CeEEEecccccCCC--CCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHH
Q 011766 162 LRACLVQSTMDCGE--GLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLE 239 (478)
Q Consensus 162 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 239 (478)
++..+....++... +.++.. ....... ...........+.+.+. ..+.+...++++..++++++.+.+
T Consensus 151 ~R~~~~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~~s~e~l~~ 220 (455)
T TIGR02022 151 IGLTLLPVFYAHSGFGGAAPNP---GQRRFIH-----DVERFARLVEVLRRELA--AQPAAVLGLAPHSLRAVTPEQLAA 220 (455)
T ss_pred CeEEeeeeeeecCCCCCCCCcc---cchhhcc-----CHHHHHHHHHHHHHHhc--cCCceEEEEecCCCCcCCHHHHHH
Confidence 99987765543211 011100 0000000 00000001112222221 124567778888888999999999
Q ss_pred HHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccch
Q 011766 240 TRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASA 319 (478)
Q Consensus 240 ~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~ 319 (478)
+.+ ++++|+++++|+.+...+........+ ..+++.+...+.+++++++.||.++++++++++++.|+.+++||.++
T Consensus 221 ~~~-a~~~g~~v~~H~~e~~~e~~~~~~~~G--~~~v~~l~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn 297 (455)
T TIGR02022 221 VLQ-ASDRQAPVHIHVAEQQKEVDDCLAWSG--RRPVEWLLDHGPVDARWCLVHATHLTDEETALLARSGAVAGLCPTTE 297 (455)
T ss_pred HHH-HHhCCCceEEEECCChHHHHHHHHHhC--CCHHHHHHHcCCCCCCEEEEEeecCCHHHHHHHHHcCCeEEEChhhh
Confidence 999 889999999999988777666655544 34789999999999999999999999999999999999999999999
Q ss_pred hhc-cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCC-CCCCCCCHHHHHHHHhHHHHHHc
Q 011766 320 MRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGT-TDPAALPAETVLRMATINGAKSV 397 (478)
Q Consensus 320 ~~~-~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ls~~~al~~~T~~pA~~l 397 (478)
+.+ .+.+|+++|+++|+++++|||+.. +.+++++|+.+....+........+ .....++.+++|+++|.++|+++
T Consensus 298 ~~lg~g~~pi~~l~~~Gv~v~lGTD~~~---~~d~~~~m~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gAral 374 (455)
T TIGR02022 298 ANLGDGIFPAVDFVAAGGRFGIGSDSHV---VIDVAEELRQLEYGQRLRDRARNVLAAGPGPSVGRALYDAALLGGAQAL 374 (455)
T ss_pred ccccCCCCCHHHHHHCCCeEEEECCCCC---CCCHHHHHHHHHHHHHHHhcccccccCCcccchHHHHHHHHHHHHHHHh
Confidence 877 688999999999999999999643 4689999988766543211000000 11234778999999999999999
Q ss_pred CCCCCccccccCccccEEEEcCCCCCCCCc--CChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHHHHHHh
Q 011766 398 LWDNDIGSLEAGKKADMVVVDPFSWPMVPV--HDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLL 475 (478)
Q Consensus 398 gl~~~~G~l~~G~~ADlvv~d~~~~~~~~~--~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~ 475 (478)
|+ + +|+|++||.|||||+|.+.+...|. .||+..+++.....+|..|||+|++|+++|+++ ..+++.+...+++
T Consensus 375 g~-~-~GsLe~Gk~ADlvvld~~~~~~~~~~~~~~~~~lv~~~~~~~V~~v~V~G~~v~~~g~~~--~~~~~~~~~~~~~ 450 (455)
T TIGR02022 375 GL-A-TGGLRAGARADFLTLDGDHPYLAGALGDSLLDRWLFAGGGAAVRDVWVGGRWVVRDGRHA--LREEIGRAFARVL 450 (455)
T ss_pred CC-C-CCccCCCCCcCEEEEeCCCcccCCCCchhHHHHHhhcCCCCCccEEEECCEEEEECCccc--cHHHHHHHHHHHH
Confidence 99 3 8999999999999999885544443 578889999888899999999999999999996 5556888777765
Q ss_pred h
Q 011766 476 M 476 (478)
Q Consensus 476 ~ 476 (478)
.
T Consensus 451 ~ 451 (455)
T TIGR02022 451 R 451 (455)
T ss_pred H
Confidence 3
No 19
>PRK08418 chlorohydrolase; Provisional
Probab=100.00 E-value=3.3e-47 Score=368.25 Aligned_cols=391 Identities=21% Similarity=0.249 Sum_probs=297.8
Q ss_pred eEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCC
Q 011766 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (478)
Q Consensus 21 ~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~ 100 (478)
++|+|+.|+|++++..++.+++|+|+ |+|++||+..+..... .+.++||++|++|+|||||+|+|+.++.+++...+
T Consensus 2 ~~i~~~~v~t~~~~~~~~~~~~v~v~-~~I~~ig~~~~~~~~~--~~~~vid~~g~~v~PG~Vn~H~H~~~~~~rg~~~~ 78 (408)
T PRK08418 2 KIIGASYIFTCDENFEILEDGAVVFD-DKILEIGDYENLKKKY--PNAKIQFFKNSVLLPAFINPHTHLEFSANKTTLDY 78 (408)
T ss_pred EEEEccEEEecCCCCceeeccEEEEC-CEEEEecCHHHHHhhC--CCCcEEecCCcEEccCccccccchhhhhhccccCC
Confidence 47899999988755567789999999 9999999854432211 23468999999999999999999999888887777
Q ss_pred CCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCHHHHHHHHHHhCCeEEEecccccCCCCCCCc
Q 011766 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (478)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 180 (478)
.++.+|+....++.+ .+..+..+........+++++||||+.+..... ...++....|++.......++.. ..
T Consensus 79 ~~~~~wl~~~~~~~~-~l~~~~~~~~~~~~~~E~l~~GtTtv~d~~~~~--~~~~a~~~~GiR~~~~~~~~~~~----~~ 151 (408)
T PRK08418 79 GDFIPWLGSVINHRE-DLLEKCKGALIQQAINEMLKSGVGTIGAISSFG--IDLEICAKSPLRVVFFNEILGSN----AS 151 (408)
T ss_pred CchHHHHHHHhhhhh-hcCHHHHHHHHHHHHHHHHhcCceEEEEeecch--hhHHHHHhcCCeEEEEeeeeCCC----cc
Confidence 788899977665543 456666667777889999999999999875432 23567788999997654332211 00
Q ss_pred ccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCChh
Q 011766 181 WAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 260 (478)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~ 260 (478)
+ ...... ...+.++.......+.++..++++.+++++++.++++.++|+++|+++++|+.+...
T Consensus 152 ~----~~~~~~------------~~~~~~~~~~~~~~~~~~~~~aph~~~t~s~e~l~~~~~~A~~~~~~i~~H~~E~~~ 215 (408)
T PRK08418 152 A----VDELYQ------------DFLARFEESKKFKSKKFIPAIAIHSPYSVHPILAKKALQLAKKENLLVSTHFLESKA 215 (408)
T ss_pred c----hhhhHH------------HHHHHHHhhhcccCCceeEEEeCCCCCCCCHHHHHHHHHHHHHcCCeEEEEecCCHH
Confidence 0 000000 111122222122345678889999999999999999999999999999999999988
Q ss_pred hhHHHhhhcCC--------------CCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCC
Q 011766 261 ENQVVMDTRKV--------------DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGF 325 (478)
Q Consensus 261 ~~~~~~~~~~~--------------~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~ 325 (478)
+.+.+....+. ...+++++...+ ..+.++.||.++++++++++++.|+.+++||.+|+++ .+.
T Consensus 216 E~~~~~~~~G~~~~~~~~~~~~~~~~~~pv~~l~~~g--~~~~~~~H~~~~~~~di~~la~~g~~v~~cP~sn~~lg~g~ 293 (408)
T PRK08418 216 EREWLEESKGWFKKFFEKFLKEPKPLYTPKEFLELFK--GLRTLFTHCVYASEEELEKIKSKNASITHCPFSNRLLSNKA 293 (408)
T ss_pred HHHHHHhccCchhhhhhhhcccccccCCHHHHHHHhC--CCCeEEEecccCCHHHHHHHHHcCCcEEECHhHHHHhcCCC
Confidence 87766655441 124677777665 4678999999999999999999999999999999887 678
Q ss_pred CcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccc
Q 011766 326 APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGS 405 (478)
Q Consensus 326 ~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~ 405 (478)
+|+++++++|+++++|||+..++++.+++++|+.+....+.. ....+.+++|+++|.++|+++|++ .|+
T Consensus 294 ~p~~~~~~~Gi~v~lGtD~~~~~~~~~~~~em~~~~~~~~~~---------~~~~~~~~~l~~aT~~gA~alg~~--~G~ 362 (408)
T PRK08418 294 LDLEKAKKAGINYSIATDGLSSNISLSLLDELRAALLTHANM---------PLLELAKILLLSATRYGAKALGLN--NGE 362 (408)
T ss_pred ccHHHHHhCCCeEEEeCCCCCCCCCcCHHHHHHHHHHHhccC---------CccccHHHHHHHHHHHHHHHhCCC--Ccc
Confidence 999999999999999999877667899999999877553311 011347899999999999999994 699
Q ss_pred cccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEE
Q 011766 406 LEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWV 453 (478)
Q Consensus 406 l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v 453 (478)
|++||.||||++|.+.....+..+|+..++ ....|..|||+|++|
T Consensus 363 l~~G~~ADlv~~d~~~~~~~~~~~~~~~~~---~~~~v~~v~v~G~~v 407 (408)
T PRK08418 363 IKEGKDADLSVFELPEECTKKEQLPLQFIL---HAKEVKKLFIGGKEV 407 (408)
T ss_pred ccCCCccCEEEEeCCCCCCChhHhHHHHHh---ccCccceEEECCEEc
Confidence 999999999999986422222334555443 246899999999987
No 20
>TIGR02967 guan_deamin guanine deaminase. This model describes guanine deaminase, which hydrolyzes guanine to xanthine and ammonia. Xanthine can then be converted to urate by xanthine dehydrogenase, and urate subsequently degraded. In some bacteria, the guanine deaminase gene is found near the xdhABC genes for xanthine dehydrogenase. Non-homologous forms of guanine deaminase also exist, as well as distantly related forms outside the scope of this model.
Probab=100.00 E-value=2.8e-47 Score=371.47 Aligned_cols=385 Identities=24% Similarity=0.376 Sum_probs=302.9
Q ss_pred eeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCCCCchHHhhhccccccC
Q 011766 37 VFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYES 116 (478)
Q Consensus 37 ~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (478)
++++++|+|+||+|++||+..+....++ .+.++||++|++|+|||||+|+|+.+..+++ ....++.+|+....++.+.
T Consensus 3 ~~~~~~V~V~~g~I~~Vg~~~~~~~~~~-~~~~viD~~g~~v~PGlId~H~Hl~~~~~~g-~~~~~~~~~~~~~~~~~~~ 80 (401)
T TIGR02967 3 YFEDGLLVVENGRIVAVGDYAELKETLP-AGVEIDDYRGHLIMPGFIDTHIHYPQTEMIA-SYGEQLLEWLEKYTFPTEA 80 (401)
T ss_pred EEeceEEEEECCEEEEecCcchhhhccC-CCCeEEeCCCCEEecceeecccCchhhhhcc-cCCchHHHHHhhCcCcccc
Confidence 4578899999999999998644322122 2458999999999999999999998877776 4456678898776666555
Q ss_pred CC-ChHHHHHHHHHHHHHHHhcCcceeecCCccCH---HHHHHHHHHhCCeEEEecccccCCCCCCCcccccCCcccCCC
Q 011766 117 NM-TEEDSYISTLLCGIELIHSGVTCFAEAGGQHV---SEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQP 192 (478)
Q Consensus 117 ~~-~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (478)
.+ +++..+......+.+++++||||+++++.... ....+.....|++.+.+...++.. .+... .........
T Consensus 81 ~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~d~~--~~~~~-~~~~~~~~~- 156 (401)
T TIGR02967 81 RFADPDHAEEVAEFFLDELLRNGTTTALVFATVHPESVDALFEAALKRGMRMIAGKVLMDRN--APDYL-RDTAESSYD- 156 (401)
T ss_pred ccCCHHHHHHHHHHHHHHHHhCCCcEEEeccccCHHHHHHHHHHHHHCCCeEEEeeeeecCC--CCccc-ccCHHHHHH-
Confidence 43 55566667777888999999999999875432 345677889999987766554321 11100 000011111
Q ss_pred CCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHc-CCceeEeccCChhhhHHHhhhcCC
Q 011766 193 DSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF-KTGIHMHVAEIPYENQVVMDTRKV 271 (478)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~-~~~v~~H~~~~~~~~~~~~~~~~~ 271 (478)
..++.++++.. .+.++....++..+.++++.+++++++|+++ |+++++|+.+...+.......++.
T Consensus 157 -----------~~~~~i~~~~~--~g~i~~~~~~~~~~~~s~e~l~~~~~~A~~~~g~~v~~H~~e~~~~~~~~~~~~~~ 223 (401)
T TIGR02967 157 -----------ESKALIERWHG--KGRLLYAVTPRFAPTSSPEQLAAAGELAKEYPDVYVQTHLSENKDEIAWVKELFPE 223 (401)
T ss_pred -----------HHHHHHHHHhC--cCCceEEEECCcCCcCcHHHHHHHHHHHHhCCCCeeEEEECCCchHHHHHHHHcCC
Confidence 44555555444 3567777888888899999999999999999 999999999888777777766665
Q ss_pred CCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCCcHHHHHHCCCcEEEcCCCCCCCCC
Q 011766 272 DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNR 350 (478)
Q Consensus 272 ~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~v~~gsD~~~~~~~ 350 (478)
...+++.++..+.++.+.++.||.++++++++++++.|+.+++||.++++. .+..|++.++++|+++++|||+... ++
T Consensus 224 ~~~~~~~l~~~g~lg~~~~~~H~~~~~~~~~~~l~~~g~~v~~~P~~~~~~~~g~~~~~~~~~~Gv~v~lGtD~~~~-~~ 302 (401)
T TIGR02967 224 AKDYLDVYDHYGLLGRRSVFAHCIHLSDEECQRLAETGAAIAHCPTSNLFLGSGLFNLKKALEHGVRVGLGTDVGGG-TS 302 (401)
T ss_pred CCcHHHHHHHCCCCCCCeEEEecccCCHHHHHHHHHcCCeEEEChHHHHHhccCCCCHHHHHHCCCeEEEecCCCCC-CC
Confidence 555688999999999999999999999999999999999999999998876 6789999999999999999998543 45
Q ss_pred cCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCC----
Q 011766 351 MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP---- 426 (478)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~---- 426 (478)
.+++++++.+....... ..+++++++|+++|.+||+.+|+++++|+|++|+.|||+++|.+.....+
T Consensus 303 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~aT~~~A~~lg~~~~~G~i~~G~~ADlvi~d~~~~~~~~~~~~ 373 (401)
T TIGR02967 303 FSMLQTLREAYKVSQLQ---------GARLSPFEAFYLATLGGARALDLDDRIGNFEPGKEADFVVLDPAATPLLALRFE 373 (401)
T ss_pred cCHHHHHHHHHHHhhhc---------CCCCCHHHHHHHHHHHHHHHhCCcCCccccCCCCccCEEEEcCCCCcccccccc
Confidence 68899888766543211 23589999999999999999999878999999999999999998655433
Q ss_pred ----cCChhhhhhhccCCCCeeEEEEcc
Q 011766 427 ----VHDRITSLVYCMRTENVVSVMCNG 450 (478)
Q Consensus 427 ----~~d~~~~~~~~~~~~~v~~v~v~G 450 (478)
..||+..+++.....+|..|||+|
T Consensus 374 ~~~~~~~~~~~~v~~~~~~~v~~v~v~G 401 (401)
T TIGR02967 374 GADTLEDKLFKLMYLGDDRNVAETYVAG 401 (401)
T ss_pred cccchhhHHHHheeecCccceeEEEeCC
Confidence 468999999999999999999998
No 21
>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=100.00 E-value=1.2e-46 Score=366.75 Aligned_cols=388 Identities=21% Similarity=0.265 Sum_probs=297.1
Q ss_pred ceeecceE-EEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccC-----CCCchHHhhh
Q 011766 36 RVFRNGGV-FVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD-----DVDLMTWLHD 109 (478)
Q Consensus 36 ~~~~~~~v-~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~-----~~~~~~~~~~ 109 (478)
++.++++| +|+||+|++||+.. ..++||++|++|+|||||+|+|+.+..+++... ..++.+|+.
T Consensus 6 ~~~~~~~i~~v~~g~I~~Vg~~~---------~~~~iD~~g~lv~PGfVn~H~Hl~~~~~rg~~~~~~~~~~~l~~w~~- 75 (418)
T cd01313 6 GWERNVRIEVDADGRIAAVNPDT---------ATEAVALLGGALLPGMPNLHSHAFQRAMAGLTEYRGSAADSFWTWRE- 75 (418)
T ss_pred ceecCeEEEEeCCCeEEEecCCC---------CCcccccCCCeeccCccccCccHHHHHhcccccccCCCCCChhhHHH-
Confidence 56788999 99999999999743 125699999999999999999999999988654 356778984
Q ss_pred ccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc--------------CHHHHHHHHHHhCCeEEEecccccCCC
Q 011766 110 RIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------------HVSEMAKAVELLGLRACLVQSTMDCGE 175 (478)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~--------------~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (478)
..++....+++++.+...+..+.+++++||||++++... ......+.....|++..+....++...
T Consensus 76 ~~~~~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~GiR~~~~~~~~~~~~ 155 (418)
T cd01313 76 LMYRFAARLTPEQIEAIARQLYIEMLLAGITAVGEFHYVHHDPDGTPYADPAELAQRVIAAASDAGIGITLLPVLYARAG 155 (418)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCEEEEeeeeccCCCCCccCChhhhHHHHHHHHHHhCCeEEeeeeEEeccC
Confidence 446666778999999999999999999999999985321 124567778899999987765554321
Q ss_pred CCCCcccccCCcccCCCCCCccccccchhHHHHHHHhc--CCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeE
Q 011766 176 GLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHH--HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHM 253 (478)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~ 253 (478)
...... ......... ......+.+.+.. ....+.+...+.++....++++.++++.++|++ |+++++
T Consensus 156 ~~~~~~-~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~s~e~l~~~~~~a~~-g~~i~~ 224 (418)
T cd01313 156 FGGPAP-NPGQRRFIN---------GYEDFLGLLEKALRAVKEHAAARIGVAPHSLRAVPAEQLAALAALASE-KAPVHI 224 (418)
T ss_pred CCCCCC-chhhhhhcc---------cHHHHHHHHHHHhhhhccCCceEEEEccCCCCCCCHHHHHHHHHHHhc-CCceEE
Confidence 100000 000000000 0002222222211 112356777788888889999999999999999 999999
Q ss_pred eccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCCcHHHHH
Q 011766 254 HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEML 332 (478)
Q Consensus 254 H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~ 332 (478)
|+.+...+...+....+ ..+++.+...+.+++++++.||.++++++++++++.|+.+++||.+++++ .+.+|+++++
T Consensus 225 H~~e~~~e~~~~~~~~g--~~~i~~l~~~g~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~~P~sn~~lg~g~~p~~~l~ 302 (418)
T cd01313 225 HLAEQPKEVDDCLAAHG--RRPVELLLDHGHLDARWCLVHATHLTDNETLLLGRSGAVVGLCPTTEANLGDGIFPAAALL 302 (418)
T ss_pred EeCCCHHHHHHHHHHcC--CCHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHcCCEEEECCCchhhccCCCCCHHHHH
Confidence 99887766555554443 34788999999999999999999999999999999999999999999877 6889999999
Q ss_pred HCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccc
Q 011766 333 HADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKA 412 (478)
Q Consensus 333 ~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~A 412 (478)
++|+++++|||+.. ..+++++|+.+....+........+...+.++.+++|+++|.++|+++|++ +|+|++||.|
T Consensus 303 ~~Gv~v~lGtD~~~---~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~gA~alg~~--~Gsle~Gk~A 377 (418)
T cd01313 303 AAGGRIGIGSDSNA---RIDLLEELRQLEYSQRLRDRARNVLATAGGSSARALLDAALAGGAQALGLA--TGALEAGARA 377 (418)
T ss_pred HCCCcEEEecCCCC---CcCHHHHHHHHHHHHHHHhcccccccccCCCCHHHHHHHHHHHHHHHhCCC--CCeECCCCcc
Confidence 99999999999643 357898888776543321100000112346999999999999999999995 8999999999
Q ss_pred cEEEEcCCCCCCCCc--CChhhhhhhccCCCCeeEEEEccE
Q 011766 413 DMVVVDPFSWPMVPV--HDRITSLVYCMRTENVVSVMCNGQ 451 (478)
Q Consensus 413 Dlvv~d~~~~~~~~~--~d~~~~~~~~~~~~~v~~v~v~G~ 451 (478)
|||++|.+.++..|. .||+..+++......|..|||+|+
T Consensus 378 Dlvvld~~~~~~~p~~~~~~~~~lv~~~~~~~V~~v~V~G~ 418 (418)
T cd01313 378 DLLSLDLDHPSLAGALPDTLLDAWVFAAGDREVRDVVVGGR 418 (418)
T ss_pred CEEEEcCCCccccCCCchhHHHHHeecCCCCceeEEEeCCC
Confidence 999999997777775 479999999998899999999995
No 22
>COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]
Probab=100.00 E-value=1.4e-45 Score=359.85 Aligned_cols=408 Identities=33% Similarity=0.548 Sum_probs=335.6
Q ss_pred ceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcccc
Q 011766 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (478)
Q Consensus 19 ~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~ 98 (478)
..++|+|..+++.|+... ++.+++.|+||+|+.|++..+.+ .+.++||++|++|+|||||+|+|..++.+++..
T Consensus 2 ~~~~i~~~~~~~~d~~~~-~~~~~~~i~~g~I~~ig~~~~~~-----~~~~~iD~~~~lv~Pgfvn~H~H~~~t~~~g~~ 75 (421)
T COG0402 2 TMLLIRGDLLLTNDPEGR-IEDGDLVIEDGKIVAIGANAEGP-----PDEEVIDAKGKLVLPGFVNAHTHLDQTLLRGLA 75 (421)
T ss_pred cceeeeCcEEeecCcccc-eeeeeEEEcCCEEEEeCCcCCCC-----CCceeecCCCCEeccCccccccchHHHHHhhhh
Confidence 346889999998765533 56789999999999999875421 356899999999999999999999999999988
Q ss_pred CCCCchHHhhhccccccCC-CChHHHHHHHHHHHHHHHhcCcceeecCCccCH---HHHHHHHHHhCCeEEEecccccCC
Q 011766 99 DDVDLMTWLHDRIWPYESN-MTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV---SEMAKAVELLGLRACLVQSTMDCG 174 (478)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~ 174 (478)
....+..|+..+.|+.+.. .++++.+......+.+++++|+|+++.+..... ....+.+...|++.+.+....+.+
T Consensus 76 ~~~~l~~wl~~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~t~~~~~~~~~~~~~~~~~~a~~~~g~r~~~~~~~~~~~ 155 (421)
T COG0402 76 DDLPLLEWLERYVWPREARLLTEEDLYARALLALLEMLRNGTTTARTHVDVVAESADAAFEAALEVGLRAVLGPVLQDVA 155 (421)
T ss_pred cccchHHHHHHHHhHHHhhcCCHHHHHHHHHHHHHHHHhcCccccccccchhhhhHHHHHHHHHHhCCeeEeeeccccCC
Confidence 7777999999988888877 566788888899999999999999777654332 346678899999998887777654
Q ss_pred CCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEe
Q 011766 175 EGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMH 254 (478)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H 254 (478)
++...... .+. +. ..++.++++...+ .+.+...++..++++++.++.+.++++++|+++++|
T Consensus 156 --~p~~~~~~-~~~-~~------------~~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~v~iH 217 (421)
T COG0402 156 --FPDPGAET-DEE-LE------------ETEELLREAHGLG--RDVVGLAPHFPYTVSPELLESLDELARKYGLPVHIH 217 (421)
T ss_pred --CCcccccc-hHH-HH------------HHHHHHHHHhcCC--CeeEEEecCCCCCCCHHHHHHHHHHHhcCCCceEEE
Confidence 22111110 000 12 4677788877765 667778999999999999999999999999999999
Q ss_pred ccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCCcHHHHHH
Q 011766 255 VAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLH 333 (478)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~ 333 (478)
+.+...+........ +..+.+.+...+.+..+.++.||.+++++++..+++.|+.+++||.+|+++ .+..|++++++
T Consensus 218 ~~E~~~e~~~~~~~~--g~~~~~~~~~~g~l~~~~~~~H~~~~~~~e~~~l~~~g~~v~~cP~sN~~L~sG~~p~~~~~~ 295 (421)
T COG0402 218 LAETLDEVERVLEPY--GARPVERLDLLGLLGSHTLLAHCVHLSEEELELLAESGASVVHCPRSNLKLGSGIAPVRRLLE 295 (421)
T ss_pred ecCcHHHHHHHHhhc--CCCHHHHHHHcCCCCCCeEEEEeccCCHHHHHHHhhCCCeEEECcchhccccCCCCCHHHHHH
Confidence 999999888877733 345888999999999999999999999999999999999999999999998 67899999999
Q ss_pred CCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcccc
Q 011766 334 ADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKAD 413 (478)
Q Consensus 334 ~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~AD 413 (478)
.|+++.+|||+..+++..++|++|..+.++.+....... ...+. ++|+++|.++|++||+ ++.|+|++|++||
T Consensus 296 ~gv~v~~gTD~~~~~~~~d~l~~~~~a~~l~~~~~~~~~-----~~~~~-~~l~~aT~~gA~alg~-~~~G~le~G~~AD 368 (421)
T COG0402 296 RGVNVALGTDGAASNNVLDMLREMRTADLLQKLAGGLLA-----AQLPG-EALDMATLGGAKALGL-DDIGSLEVGKKAD 368 (421)
T ss_pred cCCCEEEecCCccccChHHHHHHHHHHHHHHHhhcCCCc-----ccchH-HHHHHHHhhHHHHcCC-cccCCcccccccC
Confidence 999999999998887779999999999887764322111 11222 4999999999999998 6799999999999
Q ss_pred EEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeee
Q 011766 414 MVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKIL 460 (478)
Q Consensus 414 lvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~ 460 (478)
|||+|.+.....+.. +.+.+++......|..||++|+.++.++++.
T Consensus 369 lvvld~~~~~~~~~~-~~~~~v~~~~~~~v~~v~~~g~~v~~~~~~~ 414 (421)
T COG0402 369 LVVLDASAPHLAPLR-PVSRLVFAAGGKDVDRVLVDGRLVMEDGRLL 414 (421)
T ss_pred EEEEcCCCCcccccc-HHHHHHHhcCCCceeEEEECCEEEEEcceeh
Confidence 999999865444444 7778888888889999999999999999986
No 23
>cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=100.00 E-value=1e-44 Score=347.31 Aligned_cols=364 Identities=20% Similarity=0.266 Sum_probs=286.7
Q ss_pred CEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCCCCchHHhhhccccccCCCChHHHHHHH
Q 011766 48 DRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYIST 127 (478)
Q Consensus 48 G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (478)
|+|++||+..+....+ .+.+++|+.|++|+|||||+|+|+.++.+++......+.+|+.... +....+++++.+...
T Consensus 1 ~~I~aVG~~~~~~~~~--~~~~v~d~~g~~v~PGlVnaH~H~~~~~~rg~~~~~~~~~wl~~~~-~~~~~~~~e~~~~~a 77 (381)
T cd01312 1 DKILEVGDYEKLEKRY--PGAKHEFFPNGVLLPGLINAHTHLEFSANVAQFTYGRFRAWLLSVI-NSRDELLKQPWEEAI 77 (381)
T ss_pred CeEEEECChHHHHhhc--CCCeEEecCCcEEecCccccccccchhccccccCCCchHHHHHHHH-HHHHhcChHHHHHHH
Confidence 6999999865543323 2468999999999999999999999999988776778889997643 445667788888888
Q ss_pred HHHHHHHHhcCcceeecCCccCHHHHHHHHHHhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHH
Q 011766 128 LLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKE 207 (478)
Q Consensus 128 ~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (478)
..++.+++++||||+.|+... ....+.....|++...+...++... ..+ ..... ...+
T Consensus 78 ~~~~~E~l~~G~Tt~~d~~~~--~~~~~a~~~~GiR~~~~~~~~~~~~---~~~-----~~~~~------------~~~~ 135 (381)
T cd01312 78 RQGIRQMLESGTTSIGAISSD--GSLLPALASSGLRGVFFNEVIGSNP---SAI-----DFKGE------------TFLE 135 (381)
T ss_pred HHHHHHHHHhCCeEEEEecCC--HHHHHHHHHcCCcEEEEEeeECCCC---chh-----hhhHH------------HHHH
Confidence 999999999999999997643 2367788899999988776653211 000 00000 1222
Q ss_pred HHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcC----------------C
Q 011766 208 LYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK----------------V 271 (478)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~----------------~ 271 (478)
.+.++....++.++..++++.+++++++.++++.++|+++++++++|+.+...+...+....+ .
T Consensus 136 ~~~~~~~~~~~~v~~~~~p~a~~~~s~e~l~~~~~lA~~~g~~i~~Hl~E~~~e~~~~~~~~g~~~~~~~~~~~~~~~~~ 215 (381)
T cd01312 136 RFKRSKSFESQLFIPAISPHAPYSVHPELAQDLIDLAKKLNLPLSTHFLESKEEREWLEESKGWFKHFWESFLKLPKPKK 215 (381)
T ss_pred HHHHhhccCccceEEEECCCCCcccCHHHHHHHHHHHHHcCCeEEEEecCcHHHHHHHHHhccchhhHhhhhcccccccC
Confidence 233322223567888899999999999999999999999999999999999887765543321 1
Q ss_pred CCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCCcHHHHHHCCCcEEEcCCCCCCCCC
Q 011766 272 DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNR 350 (478)
Q Consensus 272 ~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~v~~gsD~~~~~~~ 350 (478)
+..+++.++..+.++++.++.||.++++++++++++.|+.+++||.+++.+ .+..|+++++++|+++++|||+...++.
T Consensus 216 g~~pv~~l~~~g~L~~~~~~~H~~~l~~~~~~~l~~~g~~v~~~P~sn~~lg~g~~p~~~~~~~Gv~v~lGtD~~~~~~~ 295 (381)
T cd01312 216 LATAIDFLDMLGGLGTRVSFVHCVYANLEEAEILASRGASIALCPRSNRLLNGGKLDVSELKKAGIPVSLGTDGLSSNIS 295 (381)
T ss_pred CCCHHHHHHHcCCCCCCcEEEECCcCCHHHHHHHHHcCCeEEECcchhhhhcCCCcCHHHHHHCCCcEEEeCCCCccCCC
Confidence 445789999999999999999999999999999999999999999999876 6789999999999999999998766667
Q ss_pred cCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCCh
Q 011766 351 MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDR 430 (478)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~ 430 (478)
.+++++|+.+....... ...++.+++|+++|.++|+++|++ .|+|++||+||||++|.+.. ..|..++
T Consensus 296 ~d~~~~~~~~~~~~~~~---------~~~~~~~~~l~~aT~~gA~alg~~--~Gsle~Gk~ADlvv~d~~~~-~~~~~~~ 363 (381)
T cd01312 296 LSLLDELRALLDLHPEE---------DLLELASELLLMATLGGARALGLN--NGEIEAGKRADFAVFELPGP-GIKEQAP 363 (381)
T ss_pred CCHHHHHHHHHHhcccc---------cccCCHHHHHHHHHHHHHHHhCCC--CCccCCCCcccEEEEeCCCc-CCCCccH
Confidence 89999998877543211 113678999999999999999994 89999999999999998754 2355555
Q ss_pred hhhhhhccCCCCeeEEEEccE
Q 011766 431 ITSLVYCMRTENVVSVMCNGQ 451 (478)
Q Consensus 431 ~~~~~~~~~~~~v~~v~v~G~ 451 (478)
...+ . ....|..|||+|+
T Consensus 364 ~~~~-~--~~~~v~~v~v~G~ 381 (381)
T cd01312 364 LQFI-L--HAKEVRHLFISGK 381 (381)
T ss_pred HHHH-H--ccCCCCEEEecCC
Confidence 4333 2 3468999999996
No 24
>KOG3968 consensus Atrazine chlorohydrolase/guanine deaminase [Nucleotide transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.5e-45 Score=332.10 Aligned_cols=413 Identities=26% Similarity=0.346 Sum_probs=322.7
Q ss_pred EEEecEEEee-CCCCceeecceEEEEC-CEEEEEcCChhhhhhhc-----cCCCeEEeCCCCEEeecccccccc-cchhh
Q 011766 22 ILHNAVIVTM-DKESRVFRNGGVFVVQ-DRIKAIGQSADILQQFS-----QMADQIIDLQSQILLPGFVNTHVH-TSQQL 93 (478)
Q Consensus 22 ~i~n~~I~t~-d~~~~~~~~~~v~I~~-G~I~~ig~~~~~~~~~~-----~~~~~viD~~G~~v~PGfID~H~H-~~~~~ 93 (478)
++.|-.+.+. .++..+.++..+.|+| |||+.|++.......+. .+..++++..|.+++|||||+|+| .-+.+
T Consensus 8 v~~gtf~~~~~~~~l~i~e~~sl~Vd~~GKi~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~mPGfVdtH~H~a~q~~ 87 (439)
T KOG3968|consen 8 VFVGTFVHTDALGELEILEGSSLGVDDTGKIVFIGKAYFDENKLKGEGVEKENTKIKLSSGHFLMPGFVDTHIHPAHQFA 87 (439)
T ss_pred EecccEEeeccccceEEecCcceeecCCccEEEeeccccchhhhcccccccccceeeecCCcEEecceeecccchHhhhh
Confidence 3444433332 3456677888889998 99999998654321111 123478999999999999999999 55555
Q ss_pred hccccCCCCchHHhhhccccccCCCCh-HHHHHHHHHHHHHHHhcCcceeecCCccCH---HHHHHHHHHhCCeEEEecc
Q 011766 94 AKGIADDVDLMTWLHDRIWPYESNMTE-EDSYISTLLCGIELIHSGVTCFAEAGGQHV---SEMAKAVELLGLRACLVQS 169 (478)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~---~~~~~~~~~~g~~~~~~~~ 169 (478)
..+.+.+.++.+|+.+++|+.+..+.. ++.+.......++++++|+||+..+.+... .-+++.+...|+++.++..
T Consensus 88 ~s~~g~d~pll~wl~~~~f~le~~~~~~e~~~q~~~~vv~~mL~~GTTt~~~f~~~~~~s~~ll~~~~~~~G~R~~igkv 167 (439)
T KOG3968|consen 88 MSGAGTDMPLLQWLGKYTFPLEATFTNEEDARQVYQRVVKEMLRAGTTTVEYFSTLHLDSELLLARAAIRAGQRALIGKV 167 (439)
T ss_pred hhccccCcHHHHHhhcceeecchhhhhHHHHHHHHHHHHHHHHHcCceehhhhhccCchhHHHHHHHHHHhCCceeeeee
Confidence 566667888999999999999999988 555555556889999999999988765433 3467788899999999999
Q ss_pred cccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCC
Q 011766 170 TMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT 249 (478)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~ 249 (478)
.++++...++.. -..++..++ ...+++....+.....+...+.++....++.+.+.+.-.+++..++
T Consensus 168 ~m~~~~~~~p~~-~~~~E~si~------------~t~~~i~~~~~~~~~~~~~~vt~~fa~~c~k~v~~~l~~lak~~~l 234 (439)
T KOG3968|consen 168 CMDCNAHAVPKG-VETTEESIE------------STEDLIPKLEKLKREKVNPIVTPRFAASCSKGVFEELSKLAKYHNL 234 (439)
T ss_pred hhccCCCCCCcc-chhHHHHHH------------HHHHHHHHHHhhccCCCCCcccccccCCCcchhHHHHHHHHHhhhh
Confidence 988874322221 122233333 4555555554444444444456667777888899999999999999
Q ss_pred ceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCCcH
Q 011766 250 GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPI 328 (478)
Q Consensus 250 ~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~ 328 (478)
+++.|..+...+..++...++....+...++..+.+.+..+++|+.++++++++.++++|..++.||.+|..+ .+.+++
T Consensus 235 ~~q~hIsen~~EI~~~~~ff~~~~~y~~~yd~~~lL~~ktvlaH~~hl~d~ei~~l~k~g~svshCP~Sn~~L~sG~~~v 314 (439)
T KOG3968|consen 235 HIQIHISENGKEIEAVKNFFPEKLSYTDVYDKGGLLTEKTVLAHLEHLSDEEIELLAKRGCSVSHCPTSNSILGSGIPRV 314 (439)
T ss_pred hhhhhhhhcHHHHHHHHHhhhhcccchHHHHHhcccchHhHhhhheecCchhHHHHHhcCCceEECCcchhhhccCCccH
Confidence 9999999999999999999988878888888899999999999999999999999999999999999999888 899999
Q ss_pred HHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcccccc
Q 011766 329 KEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEA 408 (478)
Q Consensus 329 ~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~ 408 (478)
+++++.|+.+.+|||..+ .++...++.+....+.- ....+..++|++|+|.+||.|+|++||+++..|+|++
T Consensus 315 r~lL~~~v~VgLGtDv~~----~s~l~a~r~A~~~s~hL----~~~~~~~~Ls~~e~L~lATi~GA~aLg~d~~~Gs~eV 386 (439)
T KOG3968|consen 315 RELLDIGVIVGLGTDVSG----CSILNALRQAMPMSMHL----ACVLDVMKLSMEEALYLATIGGAKALGRDDTHGSLEV 386 (439)
T ss_pred HHHHhcCceEeecCCccc----cccHHHHHHHHHHHHHH----HhccCcccCCHHHHHHHHhccchhhccCCCcccceec
Confidence 999999999999999865 34566666655543311 1112446799999999999999999999999999999
Q ss_pred CccccEEEEcCCCCC----CCC-cCChhhhhhhccCCCCeeEEEEccEEEEE
Q 011766 409 GKKADMVVVDPFSWP----MVP-VHDRITSLVYCMRTENVVSVMCNGQWVMK 455 (478)
Q Consensus 409 G~~ADlvv~d~~~~~----~~~-~~d~~~~~~~~~~~~~v~~v~v~G~~v~~ 455 (478)
||++|++++|.+.+. ..+ ..+.++.+++...++++..|||+|+.|++
T Consensus 387 GK~fDai~id~s~~~~~l~~~~~~~~lI~~~v~~g~drni~~V~V~Gk~v~~ 438 (439)
T KOG3968|consen 387 GKYFDAIIIDLSAPESPLYRFSGHHDLISKVVYNGDDRNIAEVFVAGKLVKQ 438 (439)
T ss_pred ccccceEEEeCCCCcchhhhccchHHHHHHHHhcCCCCceEEEEEccEEecc
Confidence 999999999998542 223 45667788999999999999999999875
No 25
>PRK07213 chlorohydrolase; Provisional
Probab=100.00 E-value=8.9e-44 Score=341.95 Aligned_cols=367 Identities=19% Similarity=0.289 Sum_probs=280.1
Q ss_pred eEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCC
Q 011766 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (478)
Q Consensus 21 ~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~ 100 (478)
++|+|++|++++ ...+.+++|+|++|+|++|++.. .+.++||++|++| |||||+|+|+..+.+++...+
T Consensus 2 ~li~~~~v~~~~--~~~~~~~~v~i~~g~I~~i~~~~--------~~~~~id~~g~~v-PGlvd~H~H~~~~~~rg~~~~ 70 (375)
T PRK07213 2 LVYLNGNFLYGE--DFEPKKGNLVIEDGIIKGFTNEV--------HEGNVIDAKGLVI-PPLINAHTHIGDSSIKDIGIG 70 (375)
T ss_pred EEEEeeEEEeCC--CCceeeeEEEEECCEEEEeccCC--------CCCeEEeCCCCEe-cceeeeccccCchhhhcCCCC
Confidence 579999999753 23456789999999999998641 2457999999999 999999999998888887777
Q ss_pred CCchHHhhh---ccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC---HHHHHHHHHHhCCeEEEecccccCC
Q 011766 101 VDLMTWLHD---RIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLRACLVQSTMDCG 174 (478)
Q Consensus 101 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~ 174 (478)
.++.+|+.. ..+.....+++++.+......+.+++++|+||++|+.... .....+.....+++... +..
T Consensus 71 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~~~~~~~~~~~~~a~~~~~~r~~~----~~~- 145 (375)
T PRK07213 71 KSLDELVKPPNGLKHKFLNSCSDKELVEGMKEGLYDMYNNGIKAFCDFREGGIKGINLLKKASSDLPIKPII----LGR- 145 (375)
T ss_pred CCHHHHccCCCcchHHHHhcCCHHHHHHHHHHHHHHHHHcCCeEEEEhhhcChhHHHHHHHHHHcCCCceEE----ecC-
Confidence 777777631 1112234678888888889999999999999999964222 22334444555665531 100
Q ss_pred CCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEe
Q 011766 175 EGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMH 254 (478)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H 254 (478)
+.. ... . ...+.++....... .++++..+.++++.+++++++|+++|+++++|
T Consensus 146 ---~~~----~~~---~------------~~~~~~~~~~~~~~-----g~~~~~~~~~s~~~l~~~~~~A~~~g~~v~~H 198 (375)
T PRK07213 146 ---PTE----ADE---N------------ELKKEIREILKNSD-----GIGLSGANEYSDEELKFICKECKREKKIFSIH 198 (375)
T ss_pred ---CCc----ccc---h------------hhHHHHHHHHHhcc-----cccccccccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 000 000 0 22222222221111 14555666788999999999999999999999
Q ss_pred ccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCCcHHHHHH
Q 011766 255 VAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLH 333 (478)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~ 333 (478)
+.+...+.......++ ..+++.+...+.. ++ .+.|+.++++++++++++.|+.+++||.+|+.. .+.+|+++|++
T Consensus 199 ~~e~~~e~~~~~~~~G--~~~v~~~~~~G~~-~~-~i~H~~~~~~~~i~~la~~g~~v~~~P~sn~~l~~g~~~v~~l~~ 274 (375)
T PRK07213 199 AAEHKGSVEYSLEKYG--MTEIERLINLGFK-PD-FIVHATHPSNDDLELLKENNIPVVVCPRANASFNVGLPPLNEMLE 274 (375)
T ss_pred eCCchhHHHHHHHHcC--CChHHHHHhcCCC-CC-EEEECCCCCHHHHHHHHHcCCcEEECCcchhhhccCCccHHHHHH
Confidence 9988877666555443 3366777777765 55 479999999999999999999999999999877 68899999999
Q ss_pred CCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcccc
Q 011766 334 ADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKAD 413 (478)
Q Consensus 334 ~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~AD 413 (478)
+|+++++|||+... ++.+++++|+.+.... +++++++++++|.++|+.+|+++ .|+|++|+.||
T Consensus 275 ~Gv~v~lGTD~~~~-~~~~~~~e~~~~~~~~--------------~~~~~~~l~~aT~~gA~~lg~~~-~G~l~~G~~AD 338 (375)
T PRK07213 275 KGILLGIGTDNFMA-NSPSIFREMEFIYKLY--------------HIEPKEILKMATINGAKILGLIN-VGLIEEGFKAD 338 (375)
T ss_pred CCCEEEEeeCCCCC-chHhHHHHHHHHHHHh--------------CcCHHHHHHHHHHHHHHHhCCCC-cCCcCCCCccc
Confidence 99999999998654 4567888888765321 48999999999999999999964 89999999999
Q ss_pred EEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEE
Q 011766 414 MVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQW 452 (478)
Q Consensus 414 lvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~ 452 (478)
||++|.+. ..|..||+..+++......|..|||+||.
T Consensus 339 lvv~d~~~--~~p~~dp~~~lV~~~~~~~v~~v~v~G~~ 375 (375)
T PRK07213 339 FTFIKPTN--IKFSKNPYASIITRCESGDIVNKILKGKL 375 (375)
T ss_pred EEEEcCcc--ccccCCchHHHhhhccCCCceEEEECCcC
Confidence 99999864 34778999999999888999999999983
No 26
>PRK09356 imidazolonepropionase; Validated
Probab=100.00 E-value=2.5e-40 Score=323.59 Aligned_cols=380 Identities=21% Similarity=0.257 Sum_probs=247.0
Q ss_pred cceeEEEecEEEeeCCCC----ceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhh
Q 011766 18 SSTMILHNAVIVTMDKES----RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQL 93 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~----~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~ 93 (478)
+++++|+|+.|+++++.. +.+++++|+|+||||++||+..+.+. ....++||++|++|+|||||+|+|+.+..
T Consensus 2 ~~~~li~~~~v~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~---~~~~~~iD~~g~~v~PG~id~H~Hl~~~~ 78 (406)
T PRK09356 2 MADLLWTNAQLATMDGGGMGELGIIEDGAIAIEDGKIVWVGPEADLPA---AYAAEVIDAGGKLVTPGLIDCHTHLVFGG 78 (406)
T ss_pred CceEEEECCEEEecCCCCccccccccCcEEEEECCEEEEEeCcccccc---ccCceEEECCCCEEeeceEecCCCcccCC
Confidence 567999999999876542 67889999999999999998643221 12358999999999999999999997653
Q ss_pred hccc-----cCCCCchHHhhhc--c---ccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC--H---HHHHHHHH
Q 011766 94 AKGI-----ADDVDLMTWLHDR--I---WPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--V---SEMAKAVE 158 (478)
Q Consensus 94 ~~~~-----~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~--~---~~~~~~~~ 158 (478)
.++. ....++.+|+... . +.....++.++.+......+.+++++|||++++..... . ....+...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~a~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~ 158 (406)
T PRK09356 79 NRANEFELRLQGVSYEEIAAQGGGILSTVRATRAASEEELFAQALPRLDALLAEGVTTVEIKSGYGLDLETELKMLRVAR 158 (406)
T ss_pred CcHHHHHHHHCCCcHHHHHHhcCChHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCceEEEeeccCCCCHHHHHHHHHHHH
Confidence 3321 1222344443211 0 11233466677777778889999999999999754221 1 11122222
Q ss_pred Hh----CCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCH
Q 011766 159 LL----GLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATD 234 (478)
Q Consensus 159 ~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (478)
.. +++... .. ..++.++..... ....... ....+.++.+... +.+............++
T Consensus 159 ~~~~~~~i~~~~--~~-~~~~~~~~~~~~-~~~~~~~-----------~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~ 221 (406)
T PRK09356 159 RLGEEHPVDVVT--TF-LGAHAVPPEYKG-RPDAYID-----------LVCEEMLPAVAEE--GLADAVDVFCETGAFSV 221 (406)
T ss_pred HHhhhCCCceEe--ee-eecccCCccccC-CHHHHHH-----------HHHHHHhHHHHhc--CCcceEEEEecCCCCCH
Confidence 22 332211 11 111112211100 0000000 0011223222221 22222222233345678
Q ss_pred HHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEE
Q 011766 235 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 314 (478)
Q Consensus 235 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~ 314 (478)
+.+++++++|+++|+++++|+.+..... ..+.....+ ...+.|+.++++++++++++.|+.+++
T Consensus 222 ~~l~~~~~~A~~~g~~v~~H~~~~~~~~------------~~~~~~~~~----~~~~~H~~~~~~~~~~~la~~g~~~~~ 285 (406)
T PRK09356 222 EQSERVLEAAKALGLPVKIHAEQLSNLG------------GAELAAEYG----ALSADHLEYLDEAGIAAMAEAGTVAVL 285 (406)
T ss_pred HHHHHHHHHHHHCCCCEEEEEecccCCC------------HHHHHHHcC----CcEehHhhcCCHHHHHHHHHhCCEEEE
Confidence 9999999999999999999997633211 112222222 234789999999999999999999999
Q ss_pred Cccchhhc--cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHH
Q 011766 315 CPASAMRM--LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATIN 392 (478)
Q Consensus 315 ~p~~~~~~--~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~ 392 (478)
||.+++.. .+..|+++++++|+++++|||+.+. .+++..+........ ...+++++++++++|.|
T Consensus 286 ~P~~~~~l~~~~~~~~~~l~~~Gi~v~lgtD~~~~---~~~~~~~~~~~~~~~----------~~~~l~~~~~l~~~T~~ 352 (406)
T PRK09356 286 LPGAFYFLRETQYPPARLLRDAGVPVALATDFNPG---SSPTESLLLAMNMAC----------TLFRLTPEEALAAVTIN 352 (406)
T ss_pred CccchhhcCcccCchHHHHHHCCCeEEEeCCCCCC---CChhHHHHHHHHHHh----------hhcCCCHHHHHHHHHHH
Confidence 99988765 4688999999999999999998542 133444433322110 12358999999999999
Q ss_pred HHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEE
Q 011766 393 GAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMK 455 (478)
Q Consensus 393 pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~ 455 (478)
||+++|+++++|+|++||.||||++|.+++. .+++.....+|..||++|++||+
T Consensus 353 ~A~~~g~~~~~G~i~~G~~AD~vvld~~~~~---------~~~~~~~~~~v~~v~v~G~~vy~ 406 (406)
T PRK09356 353 AARALGRQDTHGSLEVGKKADLVIWDAPSPA---------ELPYHFGVNPVETVVKNGEVVVD 406 (406)
T ss_pred HHHHhCCCCCceeeCCCCcCCEEEECCCchh---------hhhhhhCCCCccEEEECCEEeeC
Confidence 9999999888999999999999999998432 22222345789999999999985
No 27
>COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=100.00 E-value=6.8e-39 Score=310.98 Aligned_cols=208 Identities=21% Similarity=0.171 Sum_probs=164.4
Q ss_pred ccccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHh
Q 011766 228 QIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSR 307 (478)
Q Consensus 228 ~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~ 307 (478)
+....+++.+.++++.|.+.|+++.+|+.++.+....+.. ........+.-+.++.++|...+++++++|+++
T Consensus 314 G~~l~~~e~l~~~v~~a~~~gl~v~vHAiGD~Av~~~Lda-------fE~~~~~~~~~~~r~rieH~~~v~~~~i~R~~~ 386 (535)
T COG1574 314 GELLLTEEELEELVRAADERGLPVAVHAIGDGAVDAALDA-------FEKARKKNGLKGLRHRIEHAELVSPDQIERFAK 386 (535)
T ss_pred CCcccCHHHHHHHHHHHHHCCCcEEEEEechHHHHHHHHH-------HHHHhhhcCCccCCceeeeeeecCHhHHHHHHh
Confidence 4455789999999999999999999999998765443211 111222222345678899999999999999999
Q ss_pred cCCeEEECccchh-------------hccCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCC
Q 011766 308 AGVKVSHCPASAM-------------RMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGT 374 (478)
Q Consensus 308 ~~~~~~~~p~~~~-------------~~~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (478)
.|+.++++|.... +....+|++.|++.|+++++|||++. .+.++|..++.++...........
T Consensus 387 Lgv~~svQP~f~~~~~~~~~~rlG~~r~~~~~p~~~ll~~G~~la~gSD~Pv--~~~dP~~~i~~AVtr~~~~g~~~~-- 462 (535)
T COG1574 387 LGVIASVQPNFLFSDGEWYVDRLGEERASRSYPFRSLLKAGVPLAGGSDAPV--EPYDPWLGIYAAVTRKTPGGRVLG-- 462 (535)
T ss_pred cCceEeeccccccccchHHHHhhhhhhhhccCcHHHHHHCCCeEeccCCCCC--CCCChHHHHHHHHcCCCCCCCCCc--
Confidence 9999999987543 12346799999999999999999977 457899999988865543222111
Q ss_pred CCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEE
Q 011766 375 TDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVM 454 (478)
Q Consensus 375 ~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~ 454 (478)
.+..+|++|||+++|.++|.+.+.++++|+|++||.|||+|+|.|++.+.|.. +...++..||++|++||
T Consensus 463 -~~~~L~~~eAL~~yT~~~A~a~~~e~~~G~Le~G~~AD~~Vld~d~f~~~~~~---------i~~~~v~~T~~~Gk~VY 532 (535)
T COG1574 463 -PEERLTREEALRAYTEGGAYASGAEGEKGSLEPGKLADFAVLDRDPFTVDPDS---------IKDTKVVLTIVAGKVVY 532 (535)
T ss_pred -cccccCHHHHHHHHhhhhHHhhhccccccccccCceeeEEEecCCcccCChHH---------hccceEEEEEEcCeEee
Confidence 12269999999999999999999999999999999999999999977665421 24579999999999999
Q ss_pred EC
Q 011766 455 KN 456 (478)
Q Consensus 455 ~~ 456 (478)
+.
T Consensus 533 ~~ 534 (535)
T COG1574 533 RA 534 (535)
T ss_pred cC
Confidence 75
No 28
>cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.
Probab=100.00 E-value=7.7e-39 Score=313.72 Aligned_cols=368 Identities=18% Similarity=0.182 Sum_probs=248.0
Q ss_pred EEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCCC
Q 011766 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDV 101 (478)
Q Consensus 22 ~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~~ 101 (478)
.|+|++|+++ . ..+++|+|+||+|++|++..+. ..++++||++|++|+|||||+|+|+.+..+++.....
T Consensus 1 ~~~~~~~~~~--~---~~~~~v~I~~g~I~~Vg~~~~~-----~~~~~vID~~g~~v~PGlId~H~H~~~~~~~~~~~~~ 70 (398)
T cd01293 1 LLRNARLADG--G---TALVDIAIEDGRIAAIGPALAV-----PPDAEEVDAKGRLVLPAFVDPHIHLDKTFTGGRWPNN 70 (398)
T ss_pred CeeeeEEeCC--C---ceEEEEEEECCEEEEEecCCCC-----CCCCceEeCCCCEEccCEeeeeeccCcccccCCCCCC
Confidence 3789999953 1 3667999999999999986432 1356899999999999999999999877666654433
Q ss_pred CchHHhhhc--cccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC-------HHHHHHHHHHhCCeEEEeccccc
Q 011766 102 DLMTWLHDR--IWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-------VSEMAKAVELLGLRACLVQSTMD 172 (478)
Q Consensus 102 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~-------~~~~~~~~~~~g~~~~~~~~~~~ 172 (478)
....|+... .......+++++.+......+.+++++|||+++++.... .....+.....+.+.......+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (398)
T cd01293 71 SGGTLLEAIIAWEERKLLLTAEDVKERAERALELAIAHGTTAIRTHVDVDPAAGLKALEALLELREEWADLIDLQIVAFP 150 (398)
T ss_pred CccccHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHcChhheeeeecccccccchHHHHHHHHHHHhhccceEEEEecc
Confidence 333333111 111234567788888888899999999999998754321 12223333333322222111110
Q ss_pred CCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCcee
Q 011766 173 CGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIH 252 (478)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~ 252 (478)
+.... . .. ...+.++++...+...+. .........++++.+.++++.|+++|++++
T Consensus 151 -----~~~~~----~--~~------------~~~~~v~~~~~~g~~~~~-~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~ 206 (398)
T cd01293 151 -----QHGLL----S--TP------------GGEELMREALKMGADVVG-GIPPAEIDEDGEESLDTLFELAQEHGLDID 206 (398)
T ss_pred -----Ccccc----C--CC------------CHHHHHHHHHHhCCCEEe-CCCCCcCCccHHHHHHHHHHHHHHhCCCCE
Confidence 00000 0 01 445555555443322221 122222345678999999999999999999
Q ss_pred EeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCCh-------hHHHHHHhcCCeEEECccchhhc---
Q 011766 253 MHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-------TEIGLLSRAGVKVSHCPASAMRM--- 322 (478)
Q Consensus 253 ~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~-------~~~~~~~~~~~~~~~~p~~~~~~--- 322 (478)
+|+.+.......... ..+..+...+.+ .+..+.|+.++++ +.++++++.++.++.||.++...
T Consensus 207 ~H~~e~~~~~~~~~~------~~~~~~~~~g~~-~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g~~v~~~p~s~~~l~~~ 279 (398)
T cd01293 207 LHLDETDDPGSRTLE------ELAEEAERRGMQ-GRVTCSHATALGSLPEAEVSRLADLLAEAGISVVSLPPINLYLQGR 279 (398)
T ss_pred EEeCCCCCcchhHHH------HHHHHHHHhCCC-CCEEeeecchhhcCCHHHHHHHHHHHHHcCCeEEeCCCcchhhccc
Confidence 999876543211111 134445566655 6788999998862 45999999999999999988654
Q ss_pred -------cCCCcHHHHHHCCCcEEEcCCCCC----CCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhH
Q 011766 323 -------LGFAPIKEMLHADICVSLGTDGAP----SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATI 391 (478)
Q Consensus 323 -------~~~~~~~~~~~~gv~v~~gsD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~ 391 (478)
.+..++++++++|+++++|||+.. ..+..++++.++.+..... .. ...+.+++|+++|.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~Gv~v~lGTD~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~--~~~~~~~al~~aT~ 349 (398)
T cd01293 280 EDTTPKRRGVTPVKELRAAGVNVALGSDNVRDPWYPFGSGDMLEVANLAAHIAQ--------LG--TPEDLALALDLITG 349 (398)
T ss_pred ccCCCCCCCCCcHHHHHHCCCeEEECCCCCCCCCcCCCCCCHHHHHHHHHHHHc--------CC--ChhhHHHHHHhcCh
Confidence 467899999999999999999842 2234578888876554321 00 11356899999999
Q ss_pred HHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEE
Q 011766 392 NGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWV 453 (478)
Q Consensus 392 ~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v 453 (478)
++|+++|+ +.|+|++||.||||++|.+++ .|... . ..++..||++|+++
T Consensus 350 ~~A~~lg~--~~G~l~~Gk~ADlv~~d~~~~-----~~~~~----~--~~~~~~v~~~G~~~ 398 (398)
T cd01293 350 NAARALGL--EDYGIKVGCPADLVLLDAEDV-----AEAVA----R--QPPRRVVIRKGRVV 398 (398)
T ss_pred hhhhhcCC--cCcccccCCcceEEEECCCCH-----HHHHh----c--CCCccEEEECCEEC
Confidence 99999999 479999999999999999833 22111 1 25899999999864
No 29
>PRK09230 cytosine deaminase; Provisional
Probab=100.00 E-value=8.3e-38 Score=304.13 Aligned_cols=372 Identities=16% Similarity=0.211 Sum_probs=256.2
Q ss_pred cceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccc
Q 011766 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~ 97 (478)
...++|+|++|++ +. . . .+|+|+||+|++|++..+.. ..+.++||++|++|+|||||+|+|+.....++.
T Consensus 3 ~~~~li~~~~~~~--~~-~-~--~~i~i~~g~I~~i~~~~~~~----~~~~~~id~~g~~v~PGlid~H~H~~~~~~~~~ 72 (426)
T PRK09230 3 NALMTIKNARLPG--KE-G-L--WQITIEDGKISAIEPQSEAS----LEAGEVLDAEGGLAIPPFIEPHIHLDTTQTAGE 72 (426)
T ss_pred CceEEEECcEEcC--CC-e-e--EEEEEECCEEEEecCCCCCC----CCCCceEeCCCCEeccceeEEEEccccceecCC
Confidence 3468999999984 32 2 2 49999999999999853211 124579999999999999999999988766664
Q ss_pred c---CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC------HHHHHHHHHHhCCeEEEec
Q 011766 98 A---DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH------VSEMAKAVELLGLRACLVQ 168 (478)
Q Consensus 98 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~------~~~~~~~~~~~g~~~~~~~ 168 (478)
. .+.++.+|+... +.....++.++.+......+.+++++|+|+++++.... ...+.+..+..+...-+..
T Consensus 73 ~~~~~~~~l~~~i~~~-~~~~~~~t~ed~~~~a~~~~~e~l~~GvTtvr~~~d~~~~~~~~~~a~~~~~~~~~~~~~~~i 151 (426)
T PRK09230 73 PNWNQSGTLFEGIERW-AERKALLTHEDVKQRAWQTLKWQIANGIQHVRTHVDVSDPTLTALKAMLEVKEEVAPWVDLQI 151 (426)
T ss_pred CccCCCCCHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHcCcccEEeccccCCcchhHHHHHHHHHHHhhCcceEEE
Confidence 4 455678888653 45556678888889999999999999999998754321 1122233222221111111
Q ss_pred ccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccC--CHHHHHHHHHHHHH
Q 011766 169 STMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNA--TDRLLLETRDMARE 246 (478)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~a~~ 246 (478)
..+.. .+. +.. + ...+.++.....+...+ ...++..++. +++.+..++++|++
T Consensus 152 ~a~~~-~~~---~~~---~----------------~~~~~l~~a~~~~~~~v--g~~p~~~~~~~~~~e~l~~~~~~A~~ 206 (426)
T PRK09230 152 VAFPQ-EGI---LSY---P----------------NGEALLEEALRLGADVV--GAIPHFEFTREYGVESLHKAFALAQK 206 (426)
T ss_pred EeccC-ccc---cCC---c----------------cHHHHHHHHHHcCCCEE--eCCCCccccchhHHHHHHHHHHHHHH
Confidence 11100 000 000 0 11122222222222212 2334444333 57899999999999
Q ss_pred cCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccC-------ChhHHHHHHhcCCeEEECccch
Q 011766 247 FKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV-------NHTEIGLLSRAGVKVSHCPASA 319 (478)
Q Consensus 247 ~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~-------~~~~~~~~~~~~~~~~~~p~~~ 319 (478)
+|+++++|+.+...+...... .+++.+...+ ++.+.+..||.++ ++++++++++.|+.+++||.+|
T Consensus 207 ~g~~~~~H~~E~~~~~~~~~~------~~~~~~~~~g-l~~~v~~~H~~~l~~~~~~~~~~~~~~La~~gv~vv~cP~sn 279 (426)
T PRK09230 207 YDRLIDVHCDEIDDEQSRFVE------TVAALAHREG-MGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVN 279 (426)
T ss_pred hCCCcEEEECCCCCcchHHHH------HHHHHHHHhC-CCCCEEEEecCchhcCCHHHHHHHHHHHHHcCCeEEECcchh
Confidence 999999999886554321111 2466777777 7889999999999 5789999999999999999999
Q ss_pred hhc----------cCCCcHHHHHHCCCcEEEcCCCCCC----CCCcCHHHHHHHHHHHhcccccccCCCCCCCCC-CHHH
Q 011766 320 MRM----------LGFAPIKEMLHADICVSLGTDGAPS----NNRMSIVDEMYLASLINKGREVFANGTTDPAAL-PAET 384 (478)
Q Consensus 320 ~~~----------~~~~~~~~~~~~gv~v~~gsD~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-s~~~ 384 (478)
+++ .+..|+++|+++|+++++|||+... ....++++.++......... .. +.++
T Consensus 280 ~~l~~~~~~~p~~~g~~pi~~l~~aGv~V~lGTD~~~d~~~~~~~~d~~~~~~~~~~~~~~~-----------~~~~~~~ 348 (426)
T PRK09230 280 IHLQGRFDTYPKRRGITRVKEMLEAGINVCFGHDDVFDPWYPLGTANMLQVLHMGLHVCQLM-----------GYGQIND 348 (426)
T ss_pred hhhcCCCCCCCCCCCCcCHHHHHHCCCeEEEecCCCCCCCcCCCCCCHHHHHHHHHHHHhhC-----------ChhhHHH
Confidence 865 4567899999999999999997532 12457777776554332110 01 3679
Q ss_pred HHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEEC
Q 011766 385 VLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN 456 (478)
Q Consensus 385 al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~ 456 (478)
+|+++|.+||+++|+++ .| |++|+.||||++|.+ ++.+.+ + ....++.|+++|++|+..
T Consensus 349 ~l~maT~~gA~alg~~~-~g-le~G~~ADlv~~~~~--------~~~~~~-~--~~~~~~~v~~~G~~v~~~ 407 (426)
T PRK09230 349 GLNLITTHSARTLNLQD-YG-IEVGNPANLIILPAE--------NGFDAV-R--RQVPVRYSIRHGKVIAET 407 (426)
T ss_pred HHHHHhcchhHHhCCCC-cC-CCCCCcCCEEEEeCC--------CHHHHH-h--ccCCceEEEECCEEEecc
Confidence 99999999999999976 78 999999999999974 222211 1 246789999999999876
No 30
>PLN02942 dihydropyrimidinase
Probab=100.00 E-value=3e-38 Score=312.76 Aligned_cols=388 Identities=19% Similarity=0.257 Sum_probs=244.6
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~ 96 (478)
++.+++|+|++|+++++ ...++|+|+||+|++|++..+. ..++++||++|++|+|||||+|+|+....+
T Consensus 3 ~~~~lli~~~~v~~~~~----~~~~~i~I~~g~I~~i~~~~~~-----~~~~~~iD~~g~~v~PG~ID~H~H~~~~~~-- 71 (486)
T PLN02942 3 SSTKILIKGGTVVNAHH----QELADVYVEDGIIVAVAPNLKV-----PDDVRVIDATGKFVMPGGIDPHTHLAMPFM-- 71 (486)
T ss_pred CCCcEEEECcEEEcCCC----CeEeEEEEECCEEEEEcCCCCC-----CCCCeEEECCCCEEecCEeeeeeccCcccC--
Confidence 45678999999997542 2456999999999999875321 124689999999999999999999954211
Q ss_pred ccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc---CHHHHHHHHHHhCCeEEEecccccC
Q 011766 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAVELLGLRACLVQSTMDC 173 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (478)
.....+ ......+.++++||||+.|+... ...+..+.......+.. ++.
T Consensus 72 -------------------~~~~~e----d~~s~s~aAl~gGvTTv~D~~~~~~~~~~~~~~~~~~~~~~~~-----~d~ 123 (486)
T PLN02942 72 -------------------GTETID----DFFSGQAAALAGGTTMHIDFVIPVNGNLLAGYEAYEKKAEKSC-----MDY 123 (486)
T ss_pred -------------------CCcccc----hHHHHHHHHHcCCCeEEEeCCCCCCCCHHHHHHHHHHHHhhcC-----CCE
Confidence 001112 22234566899999999997422 11222222211111111 111
Q ss_pred CCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeE
Q 011766 174 GEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHM 253 (478)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~ 253 (478)
+.... ... ....... +..++.++. +...++.+..++..+..+++.+.+.++.+++.+.++++
T Consensus 124 ~~~~~--~~~-~~~~~~~------------e~~~l~~~~---gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~ 185 (486)
T PLN02942 124 GFHMA--ITK-WDDTVSR------------DMETLVKEK---GINSFKFFMAYKGSLMVTDELLLEGFKRCKSLGALAMV 185 (486)
T ss_pred EEEEE--ecC-CcHhHHH------------HHHHHHHhC---CCceEEEEEecCCCCCCCHHHHHHHHHHHHhcCCeEEE
Confidence 00000 000 0000000 222322222 22346666666666667889999999999999999999
Q ss_pred eccCChhhhHHHhhh---cCCC-------Cch-------H-HHHhhhCCCCCCeeeeeeccCCh-hHHHHHHhcCCeEEE
Q 011766 254 HVAEIPYENQVVMDT---RKVD-------HGT-------V-TFLDKIEFLQNNLLSAHTVWVNH-TEIGLLSRAGVKVSH 314 (478)
Q Consensus 254 H~~~~~~~~~~~~~~---~~~~-------~~~-------~-~~l~~~~~~~~~~~i~h~~~~~~-~~~~~~~~~~~~~~~ 314 (478)
| .++.......... .+.. .++ + ..+...+.++.+..+.|++.... ++++++++.|+.+..
T Consensus 186 H-aE~~~~~~~~~~~~~~~G~~~~~~~~~~rP~~~E~~av~~~~~la~~~g~~~~i~H~s~~~~~e~i~~~k~~G~~Vt~ 264 (486)
T PLN02942 186 H-AENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATARAIRLAKFVNTPLYVVHVMSIDAMEEIARARKSGQRVIG 264 (486)
T ss_pred E-cCCHHHHHHHHHHHHHcCCCChhhhhccCCchHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCcEEE
Confidence 9 4544432221111 1110 011 2 22334466778899999999888 899999999877665
Q ss_pred Cccc--hhh-----------c----cCCCcH---------HHHHHCCCcEEEcCCCCCCCCCcCHHH-------------
Q 011766 315 CPAS--AMR-----------M----LGFAPI---------KEMLHADICVSLGTDGAPSNNRMSIVD------------- 355 (478)
Q Consensus 315 ~p~~--~~~-----------~----~~~~~~---------~~~~~~gv~v~~gsD~~~~~~~~~~~~------------- 355 (478)
++.. ... . .-.+|+ ..+++.|+++++|||+.++....+++.
T Consensus 265 e~~ph~L~l~~~~~~~~~~~~~~~~k~~PPlr~~~~~~~L~~~l~~G~i~~igTDh~p~~~~~k~~~~~~~~~~~~G~~g 344 (486)
T PLN02942 265 EPVVSGLVLDDSKLWDPDFTIASKYVMSPPIRPAGHGKALQAALSSGILQLVGTDHCPFNSTQKAFGKDDFRKIPNGVNG 344 (486)
T ss_pred EECchhheeCHHHhcCcccccCcceEECCCCCCHHHHHHHHHHhcCCceEEEECCCCCCChHHhhcccCCHhhCCCCccc
Confidence 5442 110 1 012465 488999999999999988754333220
Q ss_pred -HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCc---CChh
Q 011766 356 -EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPV---HDRI 431 (478)
Q Consensus 356 -~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~---~d~~ 431 (478)
++....+.... .....+|++++++++|.|||+++|+++++|+|++|++|||+++|.++.+..+. .++.
T Consensus 345 ~e~~l~~~~~~~--------~~~~~i~~~~~l~~~t~~pA~~lgl~~~~G~l~~G~~ADlv~vd~~~~~~v~~~~~~s~~ 416 (486)
T PLN02942 345 IEERMHLVWDTM--------VESGQISPTDYVRVTSTECAKIFNIYPRKGAILAGSDADIIILNPNSTFTISAKTHHSRI 416 (486)
T ss_pred HHHHHHHHHHHH--------HHcCCCCHHHHHHHHHHHHHHHhCCCCCCCCcCCCCcCCEEEEcCCccEEEcHHHccccC
Confidence 22222111110 01224899999999999999999998778999999999999999987655543 3344
Q ss_pred hhhhhccC--CCCeeEEEEccEEEEECCeeeccc-HHHHHHH
Q 011766 432 TSLVYCMR--TENVVSVMCNGQWVMKNKKILLLM-RGRLFQL 470 (478)
Q Consensus 432 ~~~~~~~~--~~~v~~v~v~G~~v~~~g~~~~~~-~~~~~~~ 470 (478)
...+|... ..+|..||++|++||++|+++..+ .|++++.
T Consensus 417 ~~~py~g~~l~g~v~~tiv~G~~v~~~g~~~~~~~~G~~~~~ 458 (486)
T PLN02942 417 DTNVYEGRRGKGKVEVTISQGRVVWENGELKVVRGSGRYIEM 458 (486)
T ss_pred CCCCccCcEeeeeEEEEEECCEEEEECCEEeccCCCceEecC
Confidence 44555555 578999999999999999987655 4777653
No 31
>TIGR01224 hutI imidazolonepropionase. This enzyme catalyzes the third step in histidine degradation.
Probab=100.00 E-value=7e-38 Score=303.51 Aligned_cols=354 Identities=21% Similarity=0.266 Sum_probs=233.2
Q ss_pred ecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccc-----cCCCCchHHhhhc--c
Q 011766 39 RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI-----ADDVDLMTWLHDR--I 111 (478)
Q Consensus 39 ~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~-----~~~~~~~~~~~~~--~ 111 (478)
++++|+|+||+|++||+....+. ..+.++||++|++|+|||||+|+|+.....++. ..+.++.+|+... .
T Consensus 2 ~~~~v~i~~g~I~~vg~~~~~~~---~~~~~~iD~~g~~v~PGlin~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (377)
T TIGR01224 2 EDAVILIHGGKIVWIGQLAALPG---EEATEIIDCGGGLVTPGLVDPHTHLVFAGDRVNEFEMKLQGASYLEILAQGGGI 78 (377)
T ss_pred CceEEEEECCEEEEEechhhCCc---ccCCeEEeCCCCEEcccEEecccCccccCCcHHHHHHHhCCCCHHHHHHhcCCh
Confidence 56899999999999997432211 125589999999999999999999987555442 2456788888541 2
Q ss_pred ---ccccCCCChHHHHHHHHHHHHHHHhcCcceeecCC--ccCH---HHHHHHHH----HhCCeEEEecccccCCCCCCC
Q 011766 112 ---WPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--GQHV---SEMAKAVE----LLGLRACLVQSTMDCGEGLPA 179 (478)
Q Consensus 112 ---~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~--~~~~---~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~ 179 (478)
++....++.++.+......+.+++++|||++.... +... ....+..+ ..+++.... .. ....++.
T Consensus 79 ~~~~~~~~~~~~ed~~~~a~~~~~e~l~~Gvt~ve~~~~~g~~~~~~~~~~~a~~~~~~~~~i~~~~~--~~-~~~~~~~ 155 (377)
T TIGR01224 79 LSTVRATRAASEEELLKLALFRLKSMLRSGTTTAEVKSGYGLDLETELKMLRAAKALHEEQPVDVVTT--FL-GAHAVPP 155 (377)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHCCceEEEecccCCCCHHHHHHHHHHHHHHHhhCCCceEee--ee-ecccCCc
Confidence 24456688888888999999999999999984321 1111 11222222 234444321 11 1111111
Q ss_pred cccccCCcccCCCCCCccccccchhHHHHHHHhcCCC-CCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCC
Q 011766 180 SWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAA-DGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 258 (478)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~ 258 (478)
.+.. ...+... ......++++...+ ...++. .+.+. ..+.+.+.++++.|++.|+++++|+.+.
T Consensus 156 ~~~~-~~~~~~~-----------~~~~~~~~~~~~~~~v~~~~~-~~~~~--~~~~~~~~~~~~~A~~~g~~v~~H~~e~ 220 (377)
T TIGR01224 156 EFQG-RPDDYVD-----------GICEELIPQVAEEGLASFADV-FCEAG--VFSVEQSRRILQAAQEAGLPVKLHAEEL 220 (377)
T ss_pred cccC-CHHHHHH-----------HHHHHHHHHHHHhCCCCeeEE-EecCC--CcCHHHHHHHHHHHHHCCCCEEEEecCC
Confidence 0000 0000000 01122333332211 112221 33333 3456789999999999999999999864
Q ss_pred hhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCCcHHHHHHCCCc
Q 011766 259 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADIC 337 (478)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~ 337 (478)
.... .++.+...+ ...+.|+.++++++++++++.++.+++||.+++.. .+..|+++++++|++
T Consensus 221 ~~~~------------~~~~~~~~g----~~~~~H~~~~~~~~l~~la~~g~~~~~~P~~~~~l~~~~~p~~~l~~~Gv~ 284 (377)
T TIGR01224 221 SNLG------------GAELAAKLG----AVSADHLEHASDAGIKALAEAGTVAVLLPGTTFYLRETYPPARQLIDYGVP 284 (377)
T ss_pred CCCC------------HHHHHHHcC----CCccHHHhcCCHHHHHHHHhcCCEEEECchHHHhcCCcCccHHHHHHCCCC
Confidence 3211 222222222 23467999999999999999999999999998776 568899999999999
Q ss_pred EEEcCCCCC-CCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEE
Q 011766 338 VSLGTDGAP-SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVV 416 (478)
Q Consensus 338 v~~gsD~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv 416 (478)
+++|||+.+ ..+..+++..+..... ..++|.+++++++|.|||+++|+++++|+|++|+.|||||
T Consensus 285 v~lgTD~~~~~~~~~~~~~~~~~~~~--------------~~~ls~~eal~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv 350 (377)
T TIGR01224 285 VALATDLNPGSSPTLSMQLIMSLACR--------------LMKMTPEEALHAATVNAAYALGLGEERGTLEAGRDADLVI 350 (377)
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHH--------------hcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcCCEEE
Confidence 999999754 2211223333322211 1359999999999999999999988799999999999999
Q ss_pred EcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEE
Q 011766 417 VDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQW 452 (478)
Q Consensus 417 ~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~ 452 (478)
+|.+++. .+.+.....+|..||++|++
T Consensus 351 ~d~~~~~---------~~~~~~~~~~v~~v~v~G~~ 377 (377)
T TIGR01224 351 LSAPSYA---------EIPYHYGVNHVHAVIKNGNI 377 (377)
T ss_pred EcCCChH---------HhhhhcCCCCceEEEECCCC
Confidence 9998442 22233345689999999974
No 32
>cd01314 D-HYD D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin. The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues.
Probab=100.00 E-value=4.1e-38 Score=311.46 Aligned_cols=376 Identities=19% Similarity=0.220 Sum_probs=235.7
Q ss_pred eEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCC
Q 011766 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (478)
Q Consensus 21 ~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~ 100 (478)
++|+|++|+++++ ..+++|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+.....
T Consensus 1 lli~~~~v~~~~~----~~~~~i~I~~g~I~~ig~~~~~-----~~~~~viD~~g~~vlPGlID~H~H~~~~~~------ 65 (447)
T cd01314 1 LIIKNGTIVTADG----SFKADILIEDGKIVAIGPNLEA-----PGGVEVIDATGKYVLPGGIDPHTHLELPFM------ 65 (447)
T ss_pred CEEECCEEECCCC----ceeeeEEEECCEEEEeeCCCCC-----CCCceEEECCCCEEecCEEecccccccccc------
Confidence 4799999997532 3468999999999999875321 123589999999999999999999943110
Q ss_pred CCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCH-HHHHHHHHHhCCeEEEecccccCCCCCCC
Q 011766 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV-SEMAKAVELLGLRACLVQSTMDCGEGLPA 179 (478)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 179 (478)
.....++. ....+.++.+||||+++++.... ....+.++...... ......+.+. ..
T Consensus 66 ---------------~~~~~e~~----~~~~~~a~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~--~~ 123 (447)
T cd01314 66 ---------------GTVTADDF----ESGTRAAAAGGTTTIIDFAIPNKGQSLLEAVEKWRGKA-DGKSVIDYGF--HM 123 (447)
T ss_pred ---------------CccCcchH----HHHHHHHHhCCCcEEEeCCCCCCCCCHHHHHHHHHHHh-cCCCcccEEE--EE
Confidence 01112222 22334567899999999763222 11122221111100 0001111100 00
Q ss_pred cccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCCh
Q 011766 180 SWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 259 (478)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~ 259 (478)
.. ..... ...+.++++...+...++.+..++..+.++++.+.++++.+++.+.++++|+ +..
T Consensus 124 ~~-~~~~~----------------~~~~~~~~l~~~g~~~ik~~~~~~~~~~~s~~~l~~~~~~a~~~g~~v~~H~-E~~ 185 (447)
T cd01314 124 II-TDWTD----------------SVIEELPELVKKGISSFKVFMAYKGLLMVDDEELLDVLKRAKELGALVMVHA-ENG 185 (447)
T ss_pred ee-cCCCh----------------HHHHHHHHHHHcCCCEEEEEeccCCCCCCCHHHHHHHHHHHHhcCCeEEEEc-CCH
Confidence 00 00000 1122222322234456777777777788899999999999999999999996 555
Q ss_pred hhhHHHhhhc---CCC-------CchH--------HHHhhhCCCCCCeeeeeeccCCh-hHHHHHHhcCCeE--EECccc
Q 011766 260 YENQVVMDTR---KVD-------HGTV--------TFLDKIEFLQNNLLSAHTVWVNH-TEIGLLSRAGVKV--SHCPAS 318 (478)
Q Consensus 260 ~~~~~~~~~~---~~~-------~~~~--------~~l~~~~~~~~~~~i~h~~~~~~-~~~~~~~~~~~~~--~~~p~~ 318 (478)
.......... +.. .++. ..+...+.++.+.++.|++.... +.++.+++.|+.+ .+||.+
T Consensus 186 ~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~~~~~~~~H~s~~~~~~~i~~~k~~g~~v~~~~~ph~ 265 (447)
T cd01314 186 DVIAELQKKLLAQGKTGPEYHALSRPPEVEAEATARAIRLAELAGAPLYIVHVSSKEAADEIARARKKGLPVYGETCPQY 265 (447)
T ss_pred HHHHHHHHHHHHcCCCChHHhhhcCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCeEEEecCchh
Confidence 4433222211 110 0011 12333456677888888885432 3577778787654 689987
Q ss_pred hhhc---------cC-----CCcH---------HHHHHCCCcEEEcCCCCCCCCCcCHHH--------------HHHHHH
Q 011766 319 AMRM---------LG-----FAPI---------KEMLHADICVSLGTDGAPSNNRMSIVD--------------EMYLAS 361 (478)
Q Consensus 319 ~~~~---------~~-----~~~~---------~~~~~~gv~v~~gsD~~~~~~~~~~~~--------------~~~~~~ 361 (478)
.... .+ .+|+ .+++++|+.+++|||+.++....+++. +++...
T Consensus 266 l~~~~~~~~~~~~~g~~~~~~pplr~~~~~~~l~~~l~~G~i~~igsDh~~~~~~~k~~~~~~~~~~~~G~~g~e~~l~~ 345 (447)
T cd01314 266 LLLDDSDYWKDWFEGAKYVCSPPLRPKEDQEALWDGLSSGTLQTVGSDHCPFNFAQKARGKDDFTKIPNGVPGVETRMPL 345 (447)
T ss_pred heeCHHHhccccccccceEECCCCCChHHHHHHHHHHhCCCeeEEECCCCCCCHHHhhcccCCHhhCCCCCchHhhhHHH
Confidence 3211 01 1443 489999999999999988754433332 455544
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCc--------CChhhh
Q 011766 362 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPV--------HDRITS 433 (478)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~--------~d~~~~ 433 (478)
+.+... ....++++++++++|.|||+++|+.+++|+|++|++|||||+|.+..+..+. .+|+..
T Consensus 346 l~~~~~--------~~~~~~~~~~~~~~t~~pA~~~gl~~~~G~l~~G~~AD~vi~d~~~~~~~~~~~~~~~~~~~~~~g 417 (447)
T cd01314 346 LWSEGV--------AKGRITLEKFVELTSTNPAKIFGLYPRKGTIAVGSDADLVIWDPNAEKTISADTHHHNVDYNIFEG 417 (447)
T ss_pred HHHHHH--------HcCCCCHHHHHHHHhhHHHHHhCCCCCCCccCCCCcCCEEEEeCCcCEEecHHHhhccCCCCcccC
Confidence 443221 1235999999999999999999998888999999999999999985443332 233333
Q ss_pred hhhccCCCCeeEEEEccEEEEECCeeecc
Q 011766 434 LVYCMRTENVVSVMCNGQWVMKNKKILLL 462 (478)
Q Consensus 434 ~~~~~~~~~v~~v~v~G~~v~~~g~~~~~ 462 (478)
..+ ..+|.+||++|++||++|+++.-
T Consensus 418 ~~~---~g~v~~t~v~G~~v~~~~~~~~~ 443 (447)
T cd01314 418 MKV---KGWPVVTISRGKVVVEDGELVGE 443 (447)
T ss_pred eEE---eeeEEEEEECCEEEEECCEEecc
Confidence 222 25899999999999999998753
No 33
>PRK07572 cytosine deaminase; Validated
Probab=100.00 E-value=3.7e-36 Score=294.18 Aligned_cols=372 Identities=16% Similarity=0.164 Sum_probs=245.4
Q ss_pred ceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccc-
Q 011766 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI- 97 (478)
Q Consensus 19 ~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~- 97 (478)
++++|+|++|+++ . . ..+|+|++|+|++|++..+ ....++||++|++|+|||||+|+|+.....++.
T Consensus 2 ~~~~i~~~~i~~~--~-~---~~~i~i~~g~I~~v~~~~~------~~~~~~id~~g~~~~PG~id~h~h~~~~~~~~~~ 69 (426)
T PRK07572 2 FDLIVRNANLPDG--R-T---GIDIGIAGGRIAAVEPGLQ------AEAAEEIDAAGRLVSPPFVDPHFHMDATLSYGLP 69 (426)
T ss_pred CcEEEECeEECCC--C-e---eEEEEEECCEEEEecCCCC------CCcCceEeCCCCEEcccceehhhCcchhhccCCC
Confidence 5678999999953 2 1 3489999999999987532 124579999999999999999999987655443
Q ss_pred --cCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCC---ccCH---HHHHHHHHHhCCeEEEecc
Q 011766 98 --ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG---GQHV---SEMAKAVELLGLRACLVQS 169 (478)
Q Consensus 98 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~---~~~~---~~~~~~~~~~g~~~~~~~~ 169 (478)
..+..+.+|+.- .......++.++.+......+.+++++|+|+++++. .... ....+.....+........
T Consensus 70 ~~~~~g~l~e~l~~-~~~~~~~~t~edl~~~a~~~~~e~l~~G~Ttvrd~~d~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 148 (426)
T PRK07572 70 RVNASGTLLEGIAL-WGELKPLLTQEALVERALRYCDWAVARGLLAIRSHVDVCDPRLLAVEALLEVRERVAPYLDLQLV 148 (426)
T ss_pred CCCCCCCHHHHHHH-HHHHHhcCCHHHHHHHHHHHHHHHHHcCcccEeeccccCCCcccHHHHHHHHHHHhhccceEEEE
Confidence 245567777632 112223467788888888899999999999999952 1111 1111211222222111111
Q ss_pred cccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCC--HHHHHHHHHHHHHc
Q 011766 170 TMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNAT--DRLLLETRDMAREF 247 (478)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~a~~~ 247 (478)
.+.. .+ .+. .. ...+.+++....+...+. ..++.....+ .+.++.++++|+++
T Consensus 149 a~~~-~g---~~~---~~----------------~~~~~~~~~l~~g~d~iG--g~p~~~~~~~~~~e~l~~~~~~A~~~ 203 (426)
T PRK07572 149 AFPQ-DG---VLR---SP----------------GAVDNLERALDMGVDVVG--GIPHFERTMADGAESVRLLCEIAAER 203 (426)
T ss_pred eccC-hh---hcc---Cc----------------cHHHHHHHHHHcCCCEEe--CCCCCccccchHHHHHHHHHHHHHHc
Confidence 1100 00 000 00 122223332222222221 1233333333 38999999999999
Q ss_pred CCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCCh-------hHHHHHHhcCCeEEECccchh
Q 011766 248 KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-------TEIGLLSRAGVKVSHCPASAM 320 (478)
Q Consensus 248 ~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~-------~~~~~~~~~~~~~~~~p~~~~ 320 (478)
|+++++|+.+.......... .....+...+..+ +..+.||..+++ ++++++++.|+.++.||.+++
T Consensus 204 g~~v~~H~~e~~~~~~~~~~------~~~~~~~~~G~~~-~v~~~H~~~l~~~~~~~~~~~~~~la~~g~~vv~~P~~n~ 276 (426)
T PRK07572 204 GLRVDMHCDESDDPLSRHIE------TLAAETQRLGLQG-RVAGSHLTSMHSMDNYYVSKLIPLMAEAGVNAIANPLINI 276 (426)
T ss_pred CCCeEEEECCCCChhHHHHH------HHHHHHHHhCCCC-CEEEEccchhhcCCHHHHHHHHHHHHHcCCeEEECchhhh
Confidence 99999999776554332211 1234455667666 788999988765 669999999999999999886
Q ss_pred hc----------cCCCcHHHHHHCCCcEEEcCCCCC----CCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 011766 321 RM----------LGFAPIKEMLHADICVSLGTDGAP----SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 386 (478)
Q Consensus 321 ~~----------~~~~~~~~~~~~gv~v~~gsD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al 386 (478)
.+ .+..++++++++|+++++|||+.. ..+..++++.++.+...... .. ...++++|
T Consensus 277 ~l~~~~~~~~~~~g~~~v~~l~~~GV~v~lGtD~~~~~~~~~~~~~~~e~~~~~~~~~~~--------~~--~~~l~~~l 346 (426)
T PRK07572 277 TLQGRHDTYPKRRGMTRVPELMAAGINVAFGHDCVMDPWYSLGSGDMLEVAHMGLHVAQM--------TG--QDAMRACF 346 (426)
T ss_pred hhcCCCCCCCCCCCCcCHHHHHHCCCcEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHcC--------CC--HHHHHHHH
Confidence 54 367789999999999999999742 22356788777764433210 00 12356788
Q ss_pred HHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCe
Q 011766 387 RMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKK 458 (478)
Q Consensus 387 ~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~ 458 (478)
+++|.+||++||+++ .| |++||.||||++|.. ||...+.. ..++..||++|++|++...
T Consensus 347 ~~aT~~~A~~lgl~~-~g-i~~G~~ADlvl~d~~--------~p~e~i~~---~~~~~~V~~~G~~v~~~~~ 405 (426)
T PRK07572 347 DAVTVNPARIMGLEG-YG-LEPGCNADLVLLQAR--------DPIEAIRL---RAARLAVIRRGKVIARTPP 405 (426)
T ss_pred HHhhcchHHhhCCCC-cC-CCCCCcCCEEEEeCC--------CHHHHHHh---cCCceEEEECCEEEeccCC
Confidence 899999999999976 67 999999999999952 23332211 2478999999999988754
No 34
>PRK14085 imidazolonepropionase; Provisional
Probab=100.00 E-value=7.6e-37 Score=295.20 Aligned_cols=346 Identities=19% Similarity=0.280 Sum_probs=224.3
Q ss_pred ceeEEEe-cEEEeeCCCC-----ceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchh
Q 011766 19 STMILHN-AVIVTMDKES-----RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQ 92 (478)
Q Consensus 19 ~~~~i~n-~~I~t~d~~~-----~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~ 92 (478)
++++|+| +.|+|+|+.. .++++++|+|+||+|++|++..+. + .++++||++|++|+|||||+|+|+...
T Consensus 1 ~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~----~-~~~~~iD~~g~~v~PGlId~H~Hl~~~ 75 (382)
T PRK14085 1 MSTLITNIGELVTNDPELGEGPLGVLRDAAVVVEGGRVAWVGPAADA----P-AADERVDAGGRAVLPGFVDSHSHLVFA 75 (382)
T ss_pred CcEEEEcccEEEcCCCcccCCCcccccCcEEEEECCEEEEEcCCccC----C-CCCeEEeCCCCEEecCeEecCcCcccc
Confidence 4689999 5999987654 678899999999999999985322 1 356899999999999999999999654
Q ss_pred hhccccCCCCchHHhhhcc---------ccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC--HHHHHHHHHHhC
Q 011766 93 LAKGIADDVDLMTWLHDRI---------WPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--VSEMAKAVELLG 161 (478)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~--~~~~~~~~~~~g 161 (478)
..++. .+.+++.+.. +.....++.++.+......+.+++++|+|++++.++.. .....+..+..+
T Consensus 76 ~~r~~----~~~~~~~~~~~~~~~i~~~~~~~~~~t~e~~~~~a~~~~~~~l~~G~Ttv~~~~~~~~~~~~~~~~~~~~~ 151 (382)
T PRK14085 76 GDRSA----EFAARMAGEPYSAGGIRTTVAATRAASDEELRANVRRLVAEALRQGTTTVETKTGYGLTVEDEARSARIAA 151 (382)
T ss_pred CChhH----HHHhhhcCCCccCCChHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCceEEEcCCcCCCCHHHHHHHHHHHH
Confidence 33321 1111111111 12234567788888888899999999999999975432 333333222222
Q ss_pred CeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHH
Q 011766 162 LRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETR 241 (478)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 241 (478)
+.... .....++..+..+.. .....+. .........+.. ....+++.... ...+++.+++++
T Consensus 152 -~~~~~-~~~~g~~~~~~~~~~-~~~~~~~--------~~~~~~~~~~~~----~~~~idi~~~~---~~~~~~~l~~~~ 213 (382)
T PRK14085 152 -EFTDE-VTFLGAHVVPPEYAG-DADEYVD--------LVCGPMLDAVAP----HARWIDVFCER---GAFDEDQSRRVL 213 (382)
T ss_pred -Hhhhc-ceeeccccCCcccCC-CHHHHHH--------HHHHHHHHHHHH----hCCeEEEEecC---CCCCHHHHHHHH
Confidence 11000 000111111111110 0000000 000001111211 13344443321 135788999999
Q ss_pred HHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhh
Q 011766 242 DMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMR 321 (478)
Q Consensus 242 ~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 321 (478)
+.+++.|+++.+|+.+.... ..+..+...+.. .+.|+.++++++++++++.++.+++||.+++.
T Consensus 214 ~~a~~~g~~v~~H~~~~~~~------------~~v~~~~~~g~~----~i~H~~~l~~~~~~~la~~gv~~~~~P~~~~~ 277 (382)
T PRK14085 214 TAGRAAGLGLRVHGNQLGPG------------PGVRLAVELGAA----SVDHCTYLTDADVDALAGSGTVATLLPGAEFS 277 (382)
T ss_pred HHHHHcCCCeEEEeCcccCC------------hHHHHHHHcCCC----cHHHhCCCCHHHHHHHHHcCCEEEECcHHHHh
Confidence 99999999999999753211 012222333332 37899999999999999999999999998775
Q ss_pred c-cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 011766 322 M-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 400 (478)
Q Consensus 322 ~-~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~ 400 (478)
. .+..|+++++++|+++++|||+++.. .+...+........ ...+++++++++++|.+||+++|++
T Consensus 278 ~~~~~~~~~~l~~aGv~v~lgsD~~~~~---~~~~~~~~~~~~~~----------~~~~l~~~~al~~aT~~~A~~lg~~ 344 (382)
T PRK14085 278 TRQPYPDARRLLDAGVTVALASDCNPGS---SYTSSMPFCVALAV----------RQMGMTPAEAVWAATAGGARALRRD 344 (382)
T ss_pred cCCCCchHHHHHHCCCcEEEEeCCCCCC---ChHHHHHHHHHHHH----------HhcCCCHHHHHHHHHHHHHHHcCCC
Confidence 5 46789999999999999999985431 22222322211100 1236999999999999999999996
Q ss_pred CCccccccCccccEEEEcCCC
Q 011766 401 NDIGSLEAGKKADMVVVDPFS 421 (478)
Q Consensus 401 ~~~G~l~~G~~ADlvv~d~~~ 421 (478)
.+|+|++|+.|||+++|.+.
T Consensus 345 -~~G~l~~G~~ADlvv~d~~~ 364 (382)
T PRK14085 345 -DVGVLAVGARADLHVLDAPS 364 (382)
T ss_pred -CCCCcCCCCCCCEEEEcCCC
Confidence 48999999999999999973
No 35
>TIGR02033 D-hydantoinase D-hydantoinase. This model represents the D-hydantoinase (dihydropyrimidinase) which primarily converts 5,6-dihydrouracil to 3-ureidopropanoate but also acts on dihydrothymine and hydantoin. The enzyme is a metalloenzyme.
Probab=100.00 E-value=1.1e-36 Score=302.44 Aligned_cols=381 Identities=17% Similarity=0.229 Sum_probs=237.1
Q ss_pred eEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCC
Q 011766 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (478)
Q Consensus 21 ~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~ 100 (478)
++|+|++|+++++ ..+++|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+....
T Consensus 1 ~li~n~~vv~~~~----~~~~~V~I~dg~I~~Ig~~~~~-----~~~~~vIDa~G~~vlPGlID~H~H~~~~~------- 64 (454)
T TIGR02033 1 KLIRGGTVVNADD----VFQADVLIEGGKIVAVGRNLSP-----PDAVEEIDATGKYVMPGGIDVHTHLEMPF------- 64 (454)
T ss_pred CEEECcEEEcCCC----ceEEEEEEECCEEEEecCCCCC-----CCCCcEEECCCCEEecCEecceeccCccc-------
Confidence 4799999997543 2468999999999999874321 12458999999999999999999994311
Q ss_pred CCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC----HHHHHHHHHHhCCeEEEecccccCCCC
Q 011766 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH----VSEMAKAVELLGLRACLVQSTMDCGEG 176 (478)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~ 176 (478)
......++.+. ..+.++++||||+++++... .....+........ ....+.+..
T Consensus 65 --------------~~~~~~e~~~~----~s~~a~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 122 (454)
T TIGR02033 65 --------------GGTVTADDFFT----GTKAAAAGGTTTIIDFALPHKGESLTEALETWHEKAEG----KSVIDYGFH 122 (454)
T ss_pred --------------CCCCCcchHHH----HHHHHHhCCCCEEEeCcCCCCCCCHHHHHHHHHHHhcc----CceEEEEEE
Confidence 01112222222 23456899999999976432 12222222221110 001111100
Q ss_pred CCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEecc
Q 011766 177 LPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 256 (478)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~ 256 (478)
..... .... ...+.++.+...+...++.+.+++..+.++.+.+.++++.+++++.++++|+
T Consensus 123 ~~~~~---~~~~---------------~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~- 183 (454)
T TIGR02033 123 MMITH---WNDE---------------VLEEHIPELVEEGITSFKVFMAYKNLLMVDDEELFEILKRAKELGALLQVHA- 183 (454)
T ss_pred ecccC---CcHH---------------HHHHHHHHHHhcCCcEEEEEeecCCCCCCCHHHHHHHHHHHHhCCCeEEEEc-
Confidence 00000 0000 1222233333334456777777777778899999999999999999999997
Q ss_pred CChhhhHHHhhh---cCCC-------CchH--------HHHhhhCCCCCCeeeeeeccC-ChhHHHHHHhcCC--eEEEC
Q 011766 257 EIPYENQVVMDT---RKVD-------HGTV--------TFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGV--KVSHC 315 (478)
Q Consensus 257 ~~~~~~~~~~~~---~~~~-------~~~~--------~~l~~~~~~~~~~~i~h~~~~-~~~~~~~~~~~~~--~~~~~ 315 (478)
+........... .+.. ..+. ..+...+.++.+..+.|.+.- +-++++.+++.|+ .+.+|
T Consensus 184 E~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~e~~~v~~~~~~~~~~~~~~~i~H~s~~~~~~~i~~~~~~g~~vt~e~~ 263 (454)
T TIGR02033 184 ENGDVIAELQARLLAQGKTGPEYHALSRPPESEAEAVARAIALAALANAPLYVVHVSTASAVDEIAEAREKGQPVYGETC 263 (454)
T ss_pred CCHHHHHHHHHHHHHcCCCChhHhhhcCCHHHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcC
Confidence 544432211111 0110 0111 113333455667777777762 2467778888884 46799
Q ss_pred ccchh-----------hc-cC--CCc---------HHHHHHCCCcEEEcCCCCCCCCCcC------HH---------HHH
Q 011766 316 PASAM-----------RM-LG--FAP---------IKEMLHADICVSLGTDGAPSNNRMS------IV---------DEM 357 (478)
Q Consensus 316 p~~~~-----------~~-~~--~~~---------~~~~~~~gv~v~~gsD~~~~~~~~~------~~---------~~~ 357 (478)
|.+++ .. .+ .+| +.+++..|+.+++|||+.+++.... ++ .++
T Consensus 264 p~~l~~~~~~~~~~~~~~~~~~~~pPlr~~~~~~~l~~~l~~G~i~~igtDh~p~~~~~k~~~~~~~~~~~~~G~~g~e~ 343 (454)
T TIGR02033 264 PQYLLLDDTIYDKPGFEGAKYVCSPPLREKEDQDALWSALSSGALQTVGSDHCPFNFAQKKAIGKDDFTKIPNGGPGVEE 343 (454)
T ss_pred chheeecHHHhcCcccccceeEECCCCCChhhHHHHHHHhhcCCeEEEECCCCCCCHHHhhhcccCCHhhCCCCCchHHh
Confidence 98753 11 11 146 4489999999999999987642111 11 145
Q ss_pred HHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCc--------CC
Q 011766 358 YLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPV--------HD 429 (478)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~--------~d 429 (478)
....+..... ....++++++++++|.|||+++|+++++|+|++|++|||+|+|.+..+..+. .+
T Consensus 344 ~l~~l~~~~v--------~~~~~~~~~~~~~~t~~pa~~~gl~~~~G~l~~G~~AD~~i~d~~~~~~~~~~~~~~~~~~~ 415 (454)
T TIGR02033 344 RMTLLFDEGV--------ATGRITLEKFVELTSTNPAKIFNMYPRKGTIAVGSDADIVIWDPNRTTVISAETHHDNADYN 415 (454)
T ss_pred HHHHHHHHHH--------HcCCCCHHHHHHHHhhHHHHHcCCCCCCCccccCCcCCEEEEcCCcCeeechHHhhccCCCC
Confidence 4444433211 1124899999999999999999997778999999999999999986543332 23
Q ss_pred hhhhhhhccCCCCeeEEEEccEEEEECCeeeccc-HHHHHH
Q 011766 430 RITSLVYCMRTENVVSVMCNGQWVMKNKKILLLM-RGRLFQ 469 (478)
Q Consensus 430 ~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~-~~~~~~ 469 (478)
|+..... ..+|..||++|++||++|+++... .|++++
T Consensus 416 p~~g~~~---~g~v~~t~v~G~~v~~~g~~~~~~~~g~~~~ 453 (454)
T TIGR02033 416 PFEGFKV---QGAVVSVLSRGRVVVEDGQFVGTAGSGRFIK 453 (454)
T ss_pred cccCeEE---eeeEEEEEECCEEEEECCEEecCCCCcceec
Confidence 3333221 258999999999999999998654 477664
No 36
>PRK08323 phenylhydantoinase; Validated
Probab=100.00 E-value=1.6e-37 Score=308.61 Aligned_cols=381 Identities=17% Similarity=0.169 Sum_probs=237.5
Q ss_pred ceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcccc
Q 011766 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (478)
Q Consensus 19 ~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~ 98 (478)
++++|+|++|+++++ ..+++|+|+||+|++|++. .+.++||++|++|+|||||+|+|+....
T Consensus 1 ~d~li~n~~v~~~~~----~~~~~v~I~~g~I~~i~~~---------~~~~viD~~g~~v~PGlID~H~H~~~~~----- 62 (459)
T PRK08323 1 MSTLIKNGTVVTADD----TYKADVLIEDGKIAAIGAN---------LGDEVIDATGKYVMPGGIDPHTHMEMPF----- 62 (459)
T ss_pred CcEEEECCEEEcCCC----ceEEEEEEECCEEEEEecC---------CCceEEECCCCEEeccEEeeeecccccc-----
Confidence 468999999997532 3457999999999999864 1458999999999999999999984310
Q ss_pred CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC----HHHHHHHHHHhCC-eEEEecccccC
Q 011766 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH----VSEMAKAVELLGL-RACLVQSTMDC 173 (478)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~----~~~~~~~~~~~g~-~~~~~~~~~~~ 173 (478)
......++.+ ...+.++++||||++++.... .....+....... ...........
T Consensus 63 ----------------~~~~~~e~~~----~~~~~a~~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 122 (459)
T PRK08323 63 ----------------GGTVSSDDFE----TGTRAAACGGTTTIIDFALQPKGQSLREALEAWHGKAAGKAVIDYGFHMI 122 (459)
T ss_pred ----------------CCccccCcHH----HHHHHHHhCCCCEEEeCcCCCCCCChHHHHHHHHHHhccCceEEEEEEEE
Confidence 0011111211 223456799999999975322 1122222111100 11111000000
Q ss_pred CCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeE
Q 011766 174 GEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHM 253 (478)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~ 253 (478)
. .. .. . ...+.++++...+...++.+..++..+..+.+.+.++++.++++|.++++
T Consensus 123 ---~----~~-~~----~------------~~~~~~~~~~~~g~~~ik~~~~~~~~~~~s~~~l~~~~~~a~~~g~~v~~ 178 (459)
T PRK08323 123 ---I----TD-WN----E------------VVLDEMPELVEEGITSFKLFMAYKGALMLDDDELLRALQRAAELGALPMV 178 (459)
T ss_pred ---e----cC-Cc----H------------HHHHHHHHHHHcCCCEEEEEEecCCCCCCCHHHHHHHHHHHHhcCCEEEE
Confidence 0 00 00 0 22222333333334557776666666788999999999999999999999
Q ss_pred eccCChhhhHHHhhhc---CC-------CCchH--------HHHhhhCCCCCCeeeeeeccC-ChhHHHHHHhcCCe--E
Q 011766 254 HVAEIPYENQVVMDTR---KV-------DHGTV--------TFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVK--V 312 (478)
Q Consensus 254 H~~~~~~~~~~~~~~~---~~-------~~~~~--------~~l~~~~~~~~~~~i~h~~~~-~~~~~~~~~~~~~~--~ 312 (478)
|+ +............ +. ...+. ..+...+..+.+..+.|.... +-+.++.+++.|+. +
T Consensus 179 H~-e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~~a~~~~~~~~i~H~s~~~~~~~i~~ak~~g~~vt~ 257 (459)
T PRK08323 179 HA-ENGDAIAYLQAKLLAEGKTGPEYHALSRPPEVEGEATNRAIMLAELAGAPLYIVHVSCKEALEAIRRARARGQRVFG 257 (459)
T ss_pred Ec-CChHHHHHHHHHHHHcCCCChhhhhccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCeEEE
Confidence 96 4443322211110 10 00111 134445666777888887753 33467777888865 5
Q ss_pred EECcc------chhhcc----C-----CCc---------HHHHHHCCCcEEEcCCCCCCCCCcCHH--------------
Q 011766 313 SHCPA------SAMRML----G-----FAP---------IKEMLHADICVSLGTDGAPSNNRMSIV-------------- 354 (478)
Q Consensus 313 ~~~p~------~~~~~~----~-----~~~---------~~~~~~~gv~v~~gsD~~~~~~~~~~~-------------- 354 (478)
.+||. .++... + .+| +.+++++|+.++++||+.+++...+++
T Consensus 258 e~~p~~l~l~~~~~~~~~~~~g~~~k~~pPlr~~~~~~~l~~~l~~G~i~~i~sDh~p~~~~~~~~~~~~~~~~~p~G~~ 337 (459)
T PRK08323 258 ETCPQYLLLDESEYDGPDWFEGAKYVMSPPLRDKEHQDALWRGLQDGDLQVVATDHCPFCFEQKKQLGRGDFTKIPNGTP 337 (459)
T ss_pred EcCccceeecHHHhcCCccccccceEECCCCCChHHHHHHHHHhhcCCeeEEECCCCCCChHHhcccccCCHhhCCCCcc
Confidence 68998 444321 2 134 558999999999999998875333221
Q ss_pred -HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhh
Q 011766 355 -DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITS 433 (478)
Q Consensus 355 -~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~ 433 (478)
.+++...+..... ....++++++++++|.|||+++|+.+++|+|++|++|||||+|.+..+..+.+++.+.
T Consensus 338 ~~e~~~~~l~~~~~--------~~~~~~~~~~~~~~t~~pA~~lgl~~~~G~l~~G~~ADlvi~d~~~~~~v~~~~~~s~ 409 (459)
T PRK08323 338 GVEDRMPLLFSEGV--------MTGRITLNRFVELTSTNPAKIFGLYPRKGTIAVGADADIVIWDPNATKTISASTLHSN 409 (459)
T ss_pred hHhhhHHHHHHHHH--------HcCCCCHHHHHHHHhhHHHHHhCCCCCCcccCCCCcCCEEEEcCCcccccCHHHHhhc
Confidence 2333333332111 1234899999999999999999997778999999999999999986544444443332
Q ss_pred hhhcc-----CCCCeeEEEEccEEEEECCeeeccc-HHHHHHH
Q 011766 434 LVYCM-----RTENVVSVMCNGQWVMKNKKILLLM-RGRLFQL 470 (478)
Q Consensus 434 ~~~~~-----~~~~v~~v~v~G~~v~~~g~~~~~~-~~~~~~~ 470 (478)
..+.. ...+|.+||++|++++++|+++... .|++++.
T Consensus 410 ~~~s~~~g~~~~g~v~~viv~G~~v~~~g~~~~~~~~G~~~~~ 452 (459)
T PRK08323 410 VDYNPYEGFEVTGWPVTTLSRGEVVVEDGEFRGKAGHGRFLKR 452 (459)
T ss_pred CCCCcccCcEEeeeEEEEEECCEEEEECCEEeccCCCceEeeC
Confidence 21111 1257999999999999999998654 6887754
No 37
>PRK05985 cytosine deaminase; Provisional
Probab=100.00 E-value=2e-35 Score=286.66 Aligned_cols=368 Identities=17% Similarity=0.192 Sum_probs=235.2
Q ss_pred ceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccc-
Q 011766 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI- 97 (478)
Q Consensus 19 ~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~- 97 (478)
.+++|+|++|+++ . ..+|+|++|+|++|++..+. ..+.++||++|++|+|||||+|+|+........
T Consensus 2 ~~~~i~~~~i~~~--~-----~~~v~i~~g~i~~i~~~~~~-----~~~~~~id~~g~~v~Pg~iD~h~h~~~~~~~~~~ 69 (391)
T PRK05985 2 TDLLFRNVRPAGG--A-----AVDILIRDGRIAAIGPALAA-----PPGAEVEDGGGALALPGLVDGHIHLDKTFWGDPW 69 (391)
T ss_pred CCEEEECcEECCC--C-----eeEEEEECCEEEEecCCCCC-----CCCCcEEECCCCEEecceEeeEEccCccccCCcc
Confidence 4678999999963 2 23999999999999986431 124579999999999999999999975432211
Q ss_pred ---cCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc-------CHHHHHHHHHHhCCeEEEe
Q 011766 98 ---ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-------HVSEMAKAVELLGLRACLV 167 (478)
Q Consensus 98 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~-------~~~~~~~~~~~~g~~~~~~ 167 (478)
.....+.+++..... ...++..+.+......+.+++++|+|+++++... ......+..+.. +..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~a~~~~~~~l~~G~t~vr~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 145 (391)
T PRK05985 70 YPNEPGPSLRERIANERR--RRAASGHPAAERALALARAAAAAGTTAMRSHVDVDPDAGLRHLEAVLAARETL--RGLID 145 (391)
T ss_pred ccCCCCCCHHHHHHHHHH--hhccchhHHHHHHHHHHHHHHhcCcceEEeeEccCCCcccchHHHHHHHHHHh--hCccc
Confidence 112233444332210 1233444666677778899999999999775321 122333332222 21111
Q ss_pred cccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHc
Q 011766 168 QSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 247 (478)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~ 247 (478)
..... ++..... . .....+.+++....+.+ +...+.++....++++.+.+++++|+++
T Consensus 146 ~~~v~----~~~~g~~-----~------------~~~~~~ll~~~l~~g~~-~~gg~~p~~~~~~~~~~l~~~~~~A~~~ 203 (391)
T PRK05985 146 IQIVA----FPQSGVL-----S------------RPGTAELLDAALRAGAD-VVGGLDPAGIDGDPEGQLDIVFGLAERH 203 (391)
T ss_pred EEEEe----ccCcccc-----C------------CcCHHHHHHHHHHcCCC-EEeCCCCCCcCCCHHHHHHHHHHHHHHh
Confidence 11111 1110000 0 00223444444443332 3333455666778889999999999999
Q ss_pred CCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCC---h----hHHHHHHhcCCeEEECccchh
Q 011766 248 KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN---H----TEIGLLSRAGVKVSHCPASAM 320 (478)
Q Consensus 248 ~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~---~----~~~~~~~~~~~~~~~~p~~~~ 320 (478)
|+++++|+.+.......... ...+.....+. ..+..+.|+..+. + +.++++++.++.+++|+..
T Consensus 204 g~~i~~Hv~e~~d~~~~~~~------~~~e~~~~~g~-~~~~~i~H~~~l~~~~~~~~~~~i~~lae~g~~v~~~~~~-- 274 (391)
T PRK05985 204 GVGIDIHLHEPGELGAFQLE------RIAARTRALGM-QGRVAVSHAFCLGDLPEREVDRLAERLAEAGVAIMTNAPG-- 274 (391)
T ss_pred CCCcEEeeCCCCCccHHHHH------HHHHHHHHhCC-CCCEehhhhhhhhcCCHHHHHHHHHHHHHcCCeEEEeCCC--
Confidence 99999998775432211100 02222333333 2367899998763 3 5579999999999888554
Q ss_pred hccCCCcHHHHHHCCCcEEEcCCCCCC----CCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHH
Q 011766 321 RMLGFAPIKEMLHADICVSLGTDGAPS----NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKS 396 (478)
Q Consensus 321 ~~~~~~~~~~~~~~gv~v~~gsD~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~ 396 (478)
..+.+|++++++.|+++++|||+... ..+.++++.++.+..... ... ..+++++|+++|.+||++
T Consensus 275 -~~~~~~~~~l~~~Gv~v~lGtD~~~~~~~p~~~~~~~~~~~~~~~~~~--------~~~--~~~~~~al~~~T~~~A~~ 343 (391)
T PRK05985 275 -SVPVPPVAALRAAGVTVFGGNDGIRDTWWPYGNGDMLERAMLIGYRSG--------FRT--DDELAAALDCVTHGGARA 343 (391)
T ss_pred -CCCCCCHHHHHHCCCeEEEecCCCCCCCcCCCCCcHHHHHHHHHHHHc--------cCC--hHHHHHHHHHHcchhHHH
Confidence 26789999999999999999997532 134677877665443321 111 124689999999999999
Q ss_pred cCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECC
Q 011766 397 VLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNK 457 (478)
Q Consensus 397 lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g 457 (478)
+|+++ +.|++||.||||++|.+++. ..+. ....+..||++|++||++|
T Consensus 344 lg~~~--~~l~~G~~ADlvvld~~~~~--------~~~~---~~~~~~~v~~~G~~v~~~~ 391 (391)
T PRK05985 344 LGLED--YGLAVGARADFVLVDAETVA--------EAVV---AVPVRRLVVRGGRIVARDG 391 (391)
T ss_pred hCCcc--cCCCCCCcCCEEEECCCCHH--------HHHh---hCCcceEEEECCEEEecCC
Confidence 99965 35999999999999997331 1111 1245678999999999986
No 38
>PRK12394 putative metallo-dependent hydrolase; Provisional
Probab=100.00 E-value=2.6e-35 Score=284.01 Aligned_cols=356 Identities=14% Similarity=0.163 Sum_probs=230.0
Q ss_pred cceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccc
Q 011766 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~ 97 (478)
+++++|+|++|+++.. ....+++|+|++|+|++|++... ....++||++|++|+|||||+|+|+.....
T Consensus 2 ~~~~li~~~~i~~~~~--~~~~~~~i~i~~g~I~~i~~~~~------~~~~~viD~~g~~v~PGliD~H~H~~~~g~--- 70 (379)
T PRK12394 2 KNDILITNGHIIDPAR--NINEINNLRIINDIIVDADKYPV------ASETRIIHADGCIVTPGLIDYHAHVFYDGT--- 70 (379)
T ss_pred CccEEEECcEEECCCC--CcccccEEEEECCEEEEEcCCCC------CCCCeEEECCCCEEECCEEEeeecCCCCCc---
Confidence 4578999999996432 33456799999999999986421 124589999999999999999999842110
Q ss_pred cCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC---H---HHHHHHHHHhCCeEEEecccc
Q 011766 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---V---SEMAKAVELLGLRACLVQSTM 171 (478)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~---~---~~~~~~~~~~g~~~~~~~~~~ 171 (478)
....++. ..++++||||+++++... . ..........|++.++.....
T Consensus 71 -----------------~~~~~~~----------~~~l~~G~Ttv~d~g~~~~~~~~~~~~~~~a~~~~gira~l~~~~~ 123 (379)
T PRK12394 71 -----------------EGGVRPD----------MYMPPNGVTTVVDAGSAGTANFDAFYRTVICASKVRIKAFLTVSPP 123 (379)
T ss_pred -----------------ccccCHH----------HHHHhCCccEEEECCCCCcccHHHHHHHHhhhhcceeeeEEeeecc
Confidence 0011111 227899999999986432 1 111123455667777664443
Q ss_pred cCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCce
Q 011766 172 DCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGI 251 (478)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v 251 (478)
.... ............ ...+..++++++..... .+++.+.+......+++.+.+.+++|+++|+++
T Consensus 124 ~~~~---~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~-g~ki~~~~~~~~~~~~~~l~~~~~~A~~~g~~v 189 (379)
T PRK12394 124 GQTW---SGYQENYDPDNI----------DENKIHALFRQYRNVLQ-GLKLRVQTEDIAEYGLKPLTETLRIANDLRCPV 189 (379)
T ss_pred cccc---cCcccccChhHC----------CHHHHHHHHHHCcCcEE-EEEEEEecccccccchHHHHHHHHHHHHcCCCE
Confidence 2210 000000000000 01255555655544322 223222222212457889999999999999999
Q ss_pred eEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCC-----------hhHHHHHHhcCCeE-EECccch
Q 011766 252 HMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN-----------HTEIGLLSRAGVKV-SHCPASA 319 (478)
Q Consensus 252 ~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~-----------~~~~~~~~~~~~~~-~~~p~~~ 319 (478)
++|+.+...+.. ...+.+....+..||.+.+ .+++..+++.|+.+ +.++.++
T Consensus 190 ~iH~~e~~~~~~----------------~~~~~l~~g~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~g~s~ 253 (379)
T PRK12394 190 AVHSTHPVLPMK----------------ELVSLLRRGDIIAHAFHGKGSTILTEEGAVLAEVRQARERGVIFDAANGRSH 253 (379)
T ss_pred EEEeCCCCccHH----------------HHHHhcCCCCEEEecCCCCCCCcCCCCCCChHHHHHHHhCCeEEEecCCccc
Confidence 999987543211 1223333445677877622 34667788889876 4455443
Q ss_pred hhccCCCcHHHHHHCCC-cEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 011766 320 MRMLGFAPIKEMLHADI-CVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 398 (478)
Q Consensus 320 ~~~~~~~~~~~~~~~gv-~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lg 398 (478)
. ......+++++|+ ++++|||+.++++..+++..|.. ...+. ...+++++++++++|.|||+++|
T Consensus 254 ~---~~~~~~~~l~~G~~~~~lgTD~~~~~~~~~~~~~l~~--~~~~~---------~~~~~~~~~~~~~at~~~a~~~g 319 (379)
T PRK12394 254 F---DMNVARRAIANGFLPDIISSDLSTITKLAWPVYSLPW--VLSKY---------LALGMALEDVINACTHTPAVLMG 319 (379)
T ss_pred c---chHHHHHHHHCCCCceEEECCCCCCCcccCccchHHH--HHHHH---------HHcCCCHHHHHHHHHHHHHHHhC
Confidence 2 2344568899995 99999999876544343333322 11111 12369999999999999999999
Q ss_pred CCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEEC
Q 011766 399 WDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN 456 (478)
Q Consensus 399 l~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~ 456 (478)
+++++|+|++|+.|||+++|.+.... +..|+....++..+...|.+||++|++||++
T Consensus 320 ~~~~~G~i~~G~~ADl~~~~~~~~~~-~~~d~~g~~~~~~~~~~v~~t~v~G~~v~~~ 376 (379)
T PRK12394 320 MAAEIGTLAPGAFADIAIFKLKNRHV-EFADIHGETLTGTHVLVPQMTIKSGEILYRQ 376 (379)
T ss_pred CCCCCCccCCCCccCEEEEecCcCcc-eeccCCCCEEEeeeecceEEEEECCEEEEec
Confidence 97567999999999999999986544 5577777777766667899999999999985
No 39
>cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate. In bacteria, the enzyme is part of histidine utilization (hut) operon.
Probab=100.00 E-value=1.3e-35 Score=287.15 Aligned_cols=351 Identities=22% Similarity=0.288 Sum_probs=226.8
Q ss_pred EEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccc-----cCCCCchHHhhhc---cc--
Q 011766 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI-----ADDVDLMTWLHDR---IW-- 112 (478)
Q Consensus 43 v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~-----~~~~~~~~~~~~~---~~-- 112 (478)
|+|+||+|++|++..+.+.. ...+.++||++|++|+|||||+|+|++....++. ..+.++.+|+... .+
T Consensus 1 i~i~~g~I~~ig~~~~~~~~-~~~~~~~iD~~G~~v~Pg~vn~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (371)
T cd01296 1 IAIRDGRIAAVGPAASLPAP-GPAAAEEIDAGGRAVTPGLVDCHTHLVFAGDRVDEFAARLAGASYEEILAAGGGILSTV 79 (371)
T ss_pred CEEECCEEEEEeCchhcccc-cCCCceEEECCCCEEecceeecCCCCcCCCCcHHHHHHHHCCCCHHHHHHcCCChHHHH
Confidence 57999999999985432110 0124579999999999999999999987544321 1345667777541 12
Q ss_pred cccCCCChHHHHHHHHHHHHHHHhcCcceeecCC--ccC---HHHHHHHHHHhCCe--EEEecccccCCCCCCCcccccC
Q 011766 113 PYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--GQH---VSEMAKAVELLGLR--ACLVQSTMDCGEGLPASWAVRT 185 (478)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~--~~~---~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~ 185 (478)
.....++.++.+......+.+++++|||++++.. +.. .....+.+...+.+ ..+...... +..++.....
T Consensus 80 ~~~~~~~~~d~~~~a~~~~~~~~~~Gvt~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~-~~~~p~~~~~-- 156 (371)
T cd01296 80 RATRAASEDELFASALRRLARMLRHGTTTVEVKSGYGLDLETELKMLRVIRRLKEEGPVDLVSTFLG-AHAVPPEYKG-- 156 (371)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHCCceEEEecccCCCCHHHHHHHHHHHHHHHhhCCCceEeeeee-cccCCcccCC--
Confidence 3345677788888888999999999999998731 111 11223333333321 111111110 1111110000
Q ss_pred CcccCCCCCCccccccchhHHHHHHHhc-CCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHH
Q 011766 186 TDDCIQPDSSISFNFVSSSQKELYAKHH-HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV 264 (478)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~ 264 (478)
.+... .....+.++.+. ......++. .+... ..+.+.+.++++.|+++|+++++|+.+.....
T Consensus 157 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~A~~~g~~v~~H~~e~~~~~-- 220 (371)
T cd01296 157 REEYI-----------DLVIEEVLPAVAEENLADFCDV-FCEKG--AFSLEQSRRILEAAKEAGLPVKIHADELSNIG-- 220 (371)
T ss_pred hHHHH-----------HHHHHHHHHHHHHhCCCCEEEE-eecCC--ccCHHHHHHHHHHHHHCCCeEEEEEcCcCCCC--
Confidence 00000 001223333322 122233333 22222 34578999999999999999999998743211
Q ss_pred HhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCCcHHHHHHCCCcEEEcCC
Q 011766 265 VMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTD 343 (478)
Q Consensus 265 ~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~v~~gsD 343 (478)
........+ ...+.|+.++++++++++++.++.+++||.+++.. .+..|+++++++|+++++|||
T Consensus 221 ----------~~~~~~~~g----~~~i~H~~~~~~~~i~~la~~g~~v~~~P~~~~~l~~~~~~~~~l~~~Gv~v~lgsD 286 (371)
T cd01296 221 ----------GAELAAELG----ALSADHLEHTSDEGIAALAEAGTVAVLLPGTAFSLRETYPPARKLIDAGVPVALGTD 286 (371)
T ss_pred ----------HHHHHHHcC----CCeeHHhcCCCHHHHHHHHHcCCeEEEChHHHHHhCCCCCCHHHHHHCCCcEEEecC
Confidence 112222222 23478999999999999999999999999988765 457899999999999999999
Q ss_pred CCCCCCC-cCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCC
Q 011766 344 GAPSNNR-MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSW 422 (478)
Q Consensus 344 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~ 422 (478)
+.+.... .+++..++.+... .+++++++++++|.|||+++|+++++|+|++|+.|||||+|.+++
T Consensus 287 ~~p~~~~~~~l~~~~~~~~~~--------------~~l~~~~al~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~ 352 (371)
T cd01296 287 FNPGSSPTSSMPLVMHLACRL--------------MRMTPEEALTAATINAAAALGLGETVGSLEVGKQADLVILDAPSY 352 (371)
T ss_pred CCCCCChHHHHHHHHHHHHHh--------------cCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCCcCEEEECCCch
Confidence 7443211 1234444433321 259999999999999999999987899999999999999999843
Q ss_pred CCCCcCChhhhhhhccCCCCeeEEEEcc
Q 011766 423 PMVPVHDRITSLVYCMRTENVVSVMCNG 450 (478)
Q Consensus 423 ~~~~~~d~~~~~~~~~~~~~v~~v~v~G 450 (478)
. .+++......|..||++|
T Consensus 353 ~---------~~~~~~~~~~v~~v~~~G 371 (371)
T cd01296 353 E---------HLAYRFGVNLVEYVIKNG 371 (371)
T ss_pred H---------hhhhhcCCCCceEEEeCc
Confidence 2 223333456799999998
No 40
>COG1228 HutI Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=7.1e-36 Score=284.10 Aligned_cols=373 Identities=21% Similarity=0.253 Sum_probs=223.3
Q ss_pred cceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCCh-hhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcc
Q 011766 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSA-DILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~-~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~ 96 (478)
...+.+++++.++. .+.++++.|+|+||||+.||+.. +. +.+.++||++|++|+|||||+|+|+.....+.
T Consensus 9 ~~~~~~~~~~~~~~---~~~i~~~~v~i~~GkI~~vg~~~~~~-----~~~~~viD~~G~~V~PGLID~HtHl~~~~~~~ 80 (406)
T COG1228 9 IAMLATLAGRGLPG---LGIIEDGAVLIEDGKIVAVGPEEIDI-----PAGAEVIDAKGKTVTPGLIDAHTHLGFGGSRG 80 (406)
T ss_pred hhhheeeccccCCC---cceeecceEEEECCEEEEecCcccCC-----CCCCeEEeCCCCEEccceeeccccccccCCcc
Confidence 44567888888854 34566799999999999999873 22 23579999999999999999999997644332
Q ss_pred ccC-----CCCchHHhh--hccccccCCCCh---HHHHHHHHHHHHHHHhcCcceeecCCccCHHH-----HHHHHHHhC
Q 011766 97 IAD-----DVDLMTWLH--DRIWPYESNMTE---EDSYISTLLCGIELIHSGVTCFAEAGGQHVSE-----MAKAVELLG 161 (478)
Q Consensus 97 ~~~-----~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~-----~~~~~~~~g 161 (478)
.-. ..++...+. +..++....+.. ...+.........++.+|+|+.....+..... ..+.....+
T Consensus 81 ~~~~~~~~~~~~~~i~~~~~gi~~~~~~~~~a~~~g~~~~~~~~l~~~~~~g~~~~e~~~~~g~~~~~e~~~~~~~~~~~ 160 (406)
T COG1228 81 GEFELREAGASYTEILAAGGGILPLDRGFTTARDGGLKATALPRLKRAGSAGVTTGERKSGYGLDLETEGGHLRAAAGLK 160 (406)
T ss_pred chhhhcccCccHHHHHHhcCChhhhHHHHHHHhhcchHHHHHHHHHHHHHcCCcccceeeeecccccccccccchhhhcc
Confidence 111 111111110 011111111111 11111233355567777777755432221110 001111111
Q ss_pred C--eEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHH-HHHhcCCCCCCeEEEEeccccccCCHHHHH
Q 011766 162 L--RACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKEL-YAKHHHAADGRIRIWFGIRQIMNATDRLLL 238 (478)
Q Consensus 162 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 238 (478)
. ..... ......++.+..... ..+ ......+. +...... +..+..-........+++++.
T Consensus 161 ~~~~~~~~-~t~~~~~~~~~~~~~--~r~------------~~~~g~~~~i~~~a~~--~l~~~~d~~~~~~~fs~~e~~ 223 (406)
T COG1228 161 ESRPVAVG-STPLAAHGVPEERKA--TRE------------AYVAGARLLIKIVATG--GLASFVDAFCEGGQFSPEEIR 223 (406)
T ss_pred cccccccc-CccccccCCcccccc--hHH------------HHHHHHHHHHHHHHhc--cccchhhccccccccCHHHHH
Confidence 0 00000 000000111110000 000 00011111 2222221 111111113344567888999
Q ss_pred HHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHh--cCCe-EEEC
Q 011766 239 ETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSR--AGVK-VSHC 315 (478)
Q Consensus 239 ~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~--~~~~-~~~~ 315 (478)
++++.+.+.|+++.+|+....... ..-..+. ..+.|+..++++..+.+++ .|+. ....
T Consensus 224 ~~l~~a~~~g~~v~~HA~~~~g~~---------------~A~~~g~----~s~~H~~~ld~~~~~~~a~~~~g~~~~~l~ 284 (406)
T COG1228 224 AVLAAALKAGIPVKAHAHGADGIK---------------LAIRLGA----KSAEHGTLLDHETAALLAEKGAGTPVPVLL 284 (406)
T ss_pred HHHHHHHHCCCceEEEecccchHH---------------HHHHhCc----ceehhhhhcCHhHHHHHhhccCCCcccccc
Confidence 999999999999999998755211 1111111 2368999999999999999 7763 3444
Q ss_pred ccchhhc--cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHH
Q 011766 316 PASAMRM--LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATING 393 (478)
Q Consensus 316 p~~~~~~--~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~p 393 (478)
|...... ....+++.++++|++++++||+++.....++..+|..++.. +||++|||+++|.||
T Consensus 285 p~~~~~l~e~~~~~~~~l~~~GV~vai~TD~~~~~~~~~l~~~m~l~~~~---------------gmtp~EaL~a~T~na 349 (406)
T COG1228 285 PRTKFELRELDYKPARKLIDAGVKVAIGTDHNPGTSHGSLALEMALAVRL---------------GMTPEEALKAATINA 349 (406)
T ss_pred chhhhhhhcccchhHHHHHHCCCEEEEEcCCCCCchhhHHHHHHHHHHHc---------------CCCHHHHHHHHHHHH
Confidence 5444333 45678999999999999999998774333444444444422 599999999999999
Q ss_pred HHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCe
Q 011766 394 AKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKK 458 (478)
Q Consensus 394 A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~ 458 (478)
|++||+++++|+|++||+|||||||.|++... .|......+.+||++|+++++.+.
T Consensus 350 A~alG~~~~~Gsle~Gk~ADlvv~~~dp~~~i---------~y~~~~~~v~~v~k~G~~~~~~~~ 405 (406)
T COG1228 350 AKALGLADKVGSLEPGKDADLVVWDGDPLADI---------PYFLGLNKVEAVIKDGKVVYERGS 405 (406)
T ss_pred HHHcCCccccccccCCCccCEEEEcCCChhhc---------cccccCCceEEEEECCEEeecCCC
Confidence 99999999999999999999999999854322 233345789999999999998764
No 41
>cd01297 D-aminoacylase D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.
Probab=100.00 E-value=6.2e-35 Score=284.52 Aligned_cols=362 Identities=19% Similarity=0.158 Sum_probs=220.5
Q ss_pred eeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccC
Q 011766 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (478)
Q Consensus 20 ~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~ 99 (478)
+++|+|++|+++.+ .....++|.|+||+|++|++... ..+.++||++|++|+|||||+|+|+.....
T Consensus 1 d~~i~n~~v~~~~~--~~~~~~~i~I~~g~I~~i~~~~~------~~~~~~iD~~G~~v~PG~iD~H~H~~~~~~----- 67 (415)
T cd01297 1 DLVIRNGTVVDGTG--APPFTADVGIRDGRIAAIGPILS------TSAREVIDAAGLVVAPGFIDVHTHYDGQVF----- 67 (415)
T ss_pred CEEEECCEEECCCC--CccccceEEEECCEEEEEecCCC------CCCCeEEECCCCEEccCEeeeeecCCcccc-----
Confidence 47899999997543 33456799999999999986432 124589999999999999999999943110
Q ss_pred CCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc------CH-----------------------
Q 011766 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ------HV----------------------- 150 (478)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~------~~----------------------- 150 (478)
. ....+.++.+||||++++... ..
T Consensus 68 -------------------~--------~~~~~~a~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (415)
T cd01297 68 -------------------W--------DPDLRPSSRQGVTTVVLGNCGVSPAPANPDDLARLIMLMEGLVALGEGLPWG 120 (415)
T ss_pred -------------------c--------CcchhhHHhCcEEEEEeccccCccCCCChhhhhhhhhhhhcccccccccCCC
Confidence 0 001234678999999885321 01
Q ss_pred ----HHHHHHHHHhC--CeEEE--ecccccC-CCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeE
Q 011766 151 ----SEMAKAVELLG--LRACL--VQSTMDC-GEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIR 221 (478)
Q Consensus 151 ----~~~~~~~~~~g--~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (478)
....+.+...+ +.... ....+.. ..+... ...++..+. +..+++++..+.+...++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~l~~~~~g~~~---~~~~~~~~~------------~~~~l~~~al~~Ga~g~~ 185 (415)
T cd01297 121 WATFAEYLDALEARPPAVNVAALVGHAALRRAVMGLDA---REATEEELA------------KMRELLREALEAGALGIS 185 (415)
T ss_pred CCCHHHHHHHHHhcCCCcCeeeccCcHHHHHHHhCcCC---CCCCHHHHH------------HHHHHHHHHHHCCCeEEE
Confidence 01111111111 11000 0000000 000000 000011111 334444444454433343
Q ss_pred EEEeccccc--cCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCCh
Q 011766 222 IWFGIRQIM--NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH 299 (478)
Q Consensus 222 ~~~~~~~~~--~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~ 299 (478)
.+....+ ..+.+.+.++++.++++|..+.+|+.+........ ....+...+..+.+..+.|++....
T Consensus 186 --~~~~y~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~e~~a---------v~~~~~~a~~~g~r~~i~H~ss~~~ 254 (415)
T cd01297 186 --TGLAYAPRLYAGTAELVALARVAARYGGVYQTHVRYEGDSILEA---------LDELLRLGRETGRPVHISHLKSAGA 254 (415)
T ss_pred --cccccCCcccCCHHHHHHHHHHHHHcCCEEEEEECcccccHHHH---------HHHHHHHHHHhCCCEEEEEEecCCC
Confidence 2322222 56888999999999999999999997653211110 2233444445567899999998765
Q ss_pred ----------hHHHHHHhcCCe--EEECccchhhccCCCcHHHHHHCCCcEEEcCCCCCCCC-CcCHHHHHHHHHHHhcc
Q 011766 300 ----------TEIGLLSRAGVK--VSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAPSNN-RMSIVDEMYLASLINKG 366 (478)
Q Consensus 300 ----------~~~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~gv~v~~gsD~~~~~~-~~~~~~~~~~~~~~~~~ 366 (478)
+.++++++.|.. ..+||+.... ..++..+++. +.++++||+++... ....+..+. .+....
T Consensus 255 ~~~~~~~~~l~~i~~a~~~G~~v~~e~~p~~~~~---~~~~~~l~~~-~~~~i~SDh~~~~~~~~~~~~~~~--~~l~~~ 328 (415)
T cd01297 255 PNWGKIDRLLALIEAARAEGLQVTADVYPYGAGS---EDDVRRIMAH-PVVMGGSDGGALGKPHPRSYGDFT--RVLGHY 328 (415)
T ss_pred cccchHHHHHHHHHHHHHhCCcEEEEeCCCCCCc---HHHHHHHHcC-CCceeeeCCCcCCCCCcchhCCHH--HHHHHH
Confidence 566777776554 4577753321 4677888877 99999999977421 111111111 111100
Q ss_pred cccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEE
Q 011766 367 REVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSV 446 (478)
Q Consensus 367 ~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v 446 (478)
......+|++++++++|.|||+++|+. ++|+|++|++|||||+|++.+...+..+ .+......|.+|
T Consensus 329 -------~~~~~~~~~~~~~~~~t~~pA~~~gl~-~~G~l~~G~~ADlvv~d~~~~~~~~~~~-----~~~~~~~~v~~v 395 (415)
T cd01297 329 -------VRERKLLSLEEAVRKMTGLPARVFGLA-DRGRIAPGYRADIVVFDPDTLADRATFT-----RPNQPAEGIEAV 395 (415)
T ss_pred -------hcccCCCCHHHHHHHHHHHHHHHhCCC-CCceeCCCCCCCEEEEcccccccccchh-----hhccCCCCceEE
Confidence 001124999999999999999999996 4699999999999999998654433222 112234579999
Q ss_pred EEccEEEEECCeeecccHHH
Q 011766 447 MCNGQWVMKNKKILLLMRGR 466 (478)
Q Consensus 447 ~v~G~~v~~~g~~~~~~~~~ 466 (478)
|++|++|++++++++..+|+
T Consensus 396 iv~G~~v~~~~~~~~~~~G~ 415 (415)
T cd01297 396 LVNGVPVVRDGAFTGARPGR 415 (415)
T ss_pred EECCEEEEECCEECCCCCCC
Confidence 99999999999998776653
No 42
>PRK07583 cytosine deaminase-like protein; Validated
Probab=100.00 E-value=3.1e-33 Score=274.26 Aligned_cols=380 Identities=19% Similarity=0.180 Sum_probs=236.8
Q ss_pred CCCccceeEEEecEEEeeCCCC--------ceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeeccccc
Q 011766 14 SLGSSSTMILHNAVIVTMDKES--------RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNT 85 (478)
Q Consensus 14 ~~~~~~~~~i~n~~I~t~d~~~--------~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~ 85 (478)
+.+.+..++|+|+++-++.... ......+|.|+||||++|++.... ..+.++||++|++|+|||||+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~dg~i~~i~~~~~~-----~~~~~~id~~g~~v~Pg~id~ 80 (438)
T PRK07583 6 SLPESGRYWLKNARVPAALLEGGVPPGDTLEGLVLVDIEIADGKIAAILPAGGA-----PDELPAVDLKGRMVWPCFVDM 80 (438)
T ss_pred cCCCCCcEEEeccccccccccCccCCCcCCCCcEEEEEEEECCEEEEEecCCCC-----CCCCceecCCCCcccCCcccc
Confidence 3456778999999975432110 122356999999999999976421 125689999999999999999
Q ss_pred ccccchhhhcccc--CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCc---c----CHHHHHHH
Q 011766 86 HVHTSQQLAKGIA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---Q----HVSEMAKA 156 (478)
Q Consensus 86 H~H~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~---~----~~~~~~~~ 156 (478)
|+|+......... ...++.+.+..........++.++...........++..|+|+++..-. . ......+.
T Consensus 81 H~Hld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~~~Gtt~vRt~vd~~~~~~~~~~~~i~~~ 160 (438)
T PRK07583 81 HTHLDKGHIWPRSPNPDGTFPGALDAVTADREAHWSAEDLYRRMEFGLRCAYAHGTSAIRTHLDSFAPQAAISWEVFAEL 160 (438)
T ss_pred eeccccceecCCCCCCCCCHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhChhhEEeeeccCCCCcccHHHHHHHH
Confidence 9999876544321 2233444432111111123344555555667888899999996554221 1 11122233
Q ss_pred HHHhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEecccccc-CCHH
Q 011766 157 VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMN-ATDR 235 (478)
Q Consensus 157 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 235 (478)
.+...-..-.....+...++... +.. . +..+.+.+. .+.+ +...... ...+
T Consensus 161 ~~~~~~~~~~~~v~~~p~~~~~~-------~~~-~------------eL~~~v~~~----~gv~----g~~~~~~~~~d~ 212 (438)
T PRK07583 161 REAWAGRIALQAVSLVPLDAYLT-------DAG-E------------RLADLVAEA----GGLL----GGVTYMNPDLDA 212 (438)
T ss_pred HHHhhccCeEEEEEecChhhccC-------chH-H------------HHHHHHHHc----CCEE----eCCCCCCCCHHH
Confidence 33322221111001000011000 000 1 222222221 1222 2221212 2567
Q ss_pred HHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCC-------hhHHHHHHhc
Q 011766 236 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN-------HTEIGLLSRA 308 (478)
Q Consensus 236 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~-------~~~~~~~~~~ 308 (478)
.+.+++++|+++|+++.+|+.+........... ..+.....+. ..+..+.|+..++ ++.++++++.
T Consensus 213 ~l~~i~~lA~~~G~~v~vH~~E~~~~~~~~l~~------~~~~~~~~G~-~~~v~i~H~~~l~~~~~~~~~~~i~~la~~ 285 (438)
T PRK07583 213 QLDRLFRLARERGLDLDLHVDETGDPASRTLKA------VAEAALRNGF-EGKVTCGHCCSLAVQPEEQAQATIALVAEA 285 (438)
T ss_pred HHHHHHHHHHHhCCCcEEeECCCCCchHHHHHH------HHHHHHHhCC-CCCEEEEeccchhcCCHHHHHHHHHHHHHc
Confidence 899999999999999999997654432211110 1223333443 3468899999887 4789999999
Q ss_pred CCeEEECccchhhc-----------cCCCcHHHHHHCCCcEEEcCCCCCC----CCCcCHHHHHHHHHHHhcccccccCC
Q 011766 309 GVKVSHCPASAMRM-----------LGFAPIKEMLHADICVSLGTDGAPS----NNRMSIVDEMYLASLINKGREVFANG 373 (478)
Q Consensus 309 ~~~~~~~p~~~~~~-----------~~~~~~~~~~~~gv~v~~gsD~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (478)
|+.++.||.+++.. .+..++++++++|+++++|||+... ..+.++++.+..+.....
T Consensus 286 gv~vv~~P~~~~~l~~~~~~~~p~~~~~~~v~~l~~aGV~valGtD~~~d~~~p~g~~~~~~~~~~a~~~~~-------- 357 (438)
T PRK07583 286 GIAIVSLPMCNLYLQDRQPGRTPRWRGVTLVHELKAAGIPVAVASDNCRDPFYAYGDHDMLEVFREAVRILH-------- 357 (438)
T ss_pred CCeEEECcchhhhhcCCCcCCCCCCCCcchHHHHHHCCCeEEEEeCCCCCCCCCCCCcCHHHHHHHHHHHHh--------
Confidence 99999999987643 2457899999999999999998421 123567776665543221
Q ss_pred CCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEE
Q 011766 374 TTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWV 453 (478)
Q Consensus 374 ~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v 453 (478)
.+.+++++++++|.+||+++|+++ +|+|++|+.||||++|.+++. + ++. ....++.||++|++|
T Consensus 358 ----~~~~~~~al~~~T~~~A~~lg~~~-~G~i~~G~~ADlvv~d~~~~~-----~----~~~--~~~~~~~V~~~G~~v 421 (438)
T PRK07583 358 ----LDHPYDDWPAAVTTTPADIMGLPD-LGRIAVGAPADLVLFKARSFS-----E----LLS--RPQSDRIVLRAGKPI 421 (438)
T ss_pred ----cCCcHHHHHHHHhHHHHHHcCCCC-CCCcCCCCCCCEEEEcCCCHH-----H----HHh--cCCCccEEEECCEEe
Confidence 136899999999999999999976 899999999999999998332 2 111 235678899999988
Q ss_pred EECC
Q 011766 454 MKNK 457 (478)
Q Consensus 454 ~~~g 457 (478)
....
T Consensus 422 ~~~~ 425 (438)
T PRK07583 422 DTTL 425 (438)
T ss_pred cccC
Confidence 7554
No 43
>PRK10657 isoaspartyl dipeptidase; Provisional
Probab=100.00 E-value=4.3e-32 Score=263.89 Aligned_cols=343 Identities=22% Similarity=0.265 Sum_probs=215.1
Q ss_pred ceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcccc
Q 011766 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (478)
Q Consensus 19 ~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~ 98 (478)
|.++|+|++|++++. ..+++|+|+||+|++|++..+.+. ...+.++||++|++|+|||||+|+|+....
T Consensus 1 ~~~~i~~~~v~~~~~----~~~~~i~i~~g~I~~v~~~~~~~~--~~~~~~~id~~g~~v~PG~id~H~H~~~~~----- 69 (388)
T PRK10657 1 MFTLLKNAHVYAPED----LGKKDILIAGGKIIAIADNINIPD--IVPDIEVIDASGKILVPGFIDQHVHIIGGG----- 69 (388)
T ss_pred CeEEEEccEEECCCC----CcceEEEEECCEEEEecCCccccc--cCCCCeEEECCCCEEcccceeeeeCcccCC-----
Confidence 458999999997542 346799999999999987543211 012458999999999999999999984210
Q ss_pred CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCc-----cCH---HHHHHHHHHhCCeEEEeccc
Q 011766 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QHV---SEMAKAVELLGLRACLVQST 170 (478)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~-----~~~---~~~~~~~~~~g~~~~~~~~~ 170 (478)
... .| ...+. ...+.+++++|+||++++.+ .+. ....+.....|++.+.....
T Consensus 70 ~~~---~~---------~~~t~-------~~~~~~~~~~GvTTvvd~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~~ 130 (388)
T PRK10657 70 GEG---GF---------STRTP-------EVQLSDLTEAGITTVVGLLGTDGITRSMESLLAKARALEEEGISAYMYTGS 130 (388)
T ss_pred CCc---cc---------ccCCH-------HHHHHHHHhCCceEEECCCCCCCCCCCHHHHHHHHHHHHhhCCEEEEEecC
Confidence 000 00 00111 13556789999999999763 122 23344555788998744322
Q ss_pred ccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCC-
Q 011766 171 MDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT- 249 (478)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~- 249 (478)
+.. +..+. ..... +.....+++.. .+ +.....+.....+++.+.++.+.++..+.
T Consensus 131 ~~~----~~~~~----~~~~~------------~~~~~~~~~~g--~g--~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~ 186 (388)
T PRK10657 131 YHV----PVRTI----TGSIR------------KDIVLIDKVIG--VG--EIAISDHRSSQPTVEELARLAAEARVGGLL 186 (388)
T ss_pred CCC----Cchhh----hcchh------------hceehhhhhhC--cc--eeeeccCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 211 11000 00000 11111222221 11 23355566566788888888888775543
Q ss_pred -----ceeEeccCChhhhHHHhhhcCCCCchH-HHHhhhCCCCCCeeeeeecc---CChhHHHHHHhcCCeEEEC-ccch
Q 011766 250 -----GIHMHVAEIPYENQVVMDTRKVDHGTV-TFLDKIEFLQNNLLSAHTVW---VNHTEIGLLSRAGVKVSHC-PASA 319 (478)
Q Consensus 250 -----~v~~H~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~i~h~~~---~~~~~~~~~~~~~~~~~~~-p~~~ 319 (478)
++++|+.+.....+ .+ +++...+....+++..|+.. ..++.++.++ .|..+.+. +...
T Consensus 187 ~g~~~~i~vH~~~~~~~l~-----------~v~~~l~~~Gv~~~~~~~~H~~~~~~~~~~~~~~~~-~G~~~~v~~~~~~ 254 (388)
T PRK10657 187 SGKAGIVHVHMGDGKKGLQ-----------PLFELLENTDIPISQFLPTHVNRNEPLFEQALEFAK-KGGVIDLTTSDPD 254 (388)
T ss_pred cCCCCEEEEEeCCchHHHH-----------HHHHHHHhcCCCcceeeCcccCCCHHHHHHHHHHHH-cCCeEEEecCCCc
Confidence 79999885433222 22 34456666666677778776 3344444444 55555332 2222
Q ss_pred hhc----cCCCcHHHHHHCCC---cEEEcCCCCCCCCCc---------------CHHHHHHHHHHHhcccccccCCCCCC
Q 011766 320 MRM----LGFAPIKEMLHADI---CVSLGTDGAPSNNRM---------------SIVDEMYLASLINKGREVFANGTTDP 377 (478)
Q Consensus 320 ~~~----~~~~~~~~~~~~gv---~v~~gsD~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (478)
.+. .....+.+++++|+ +++++||+....+.. .+...+..+.. .
T Consensus 255 ~~~~~~~~~~~~l~~~~~~G~~~d~v~l~tD~~~~~~~~~~~g~~~~~g~~~~~~l~~~~~~~~~--------------~ 320 (388)
T PRK10657 255 FLGEGEVAPAEALKRALEAGVPLSRVTLSSDGNGSLPKFDEDGNLVGLGVGSVESLLEEVRELVK--------------D 320 (388)
T ss_pred ccccCccCHHHHHHHHHHcCCChhheEEECCCCCCCceeccCCCEeccCcCchhhHHHHHHHHHH--------------h
Confidence 221 12345778999998 789999974321111 13333332221 1
Q ss_pred CCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECC
Q 011766 378 AALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNK 457 (478)
Q Consensus 378 ~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g 457 (478)
.++|++++++++|.|||+.+|+++ +|+|++|++|||+++|.+ ..+..||++|++|+++|
T Consensus 321 ~gis~~~~l~~aT~npA~~lg~~~-~G~l~~G~~AD~vv~~~~--------------------~~~~~~~~~G~~v~~~~ 379 (388)
T PRK10657 321 EGLPLEDALKPLTSNVARFLKLNG-KGEILPGKDADLLVLDDD--------------------LRIEQVIAKGKLMVKDG 379 (388)
T ss_pred cCCCHHHHHHHHHHHHHHHhCCCC-CCccCCCCccCEEEECCC--------------------CCEEEEEECCEEEEECC
Confidence 369999999999999999999976 899999999999999943 47999999999999999
Q ss_pred eeecc
Q 011766 458 KILLL 462 (478)
Q Consensus 458 ~~~~~ 462 (478)
++++.
T Consensus 380 ~~~~~ 384 (388)
T PRK10657 380 KALVK 384 (388)
T ss_pred EEecc
Confidence 98653
No 44
>TIGR01975 isoAsp_dipep isoaspartyl dipeptidase IadA. The L-isoaspartyl derivative of Asp arises non-enzymatically over time as a form of protein damage. In this isomerization, the connectivity of the polypeptide changes to pass through the beta-carboxyl of the side chain. Much but not all of this damage can be repaired by protein-L-isoaspartate (D-aspartate) O-methyltransferase. This model describes the isoaspartyl dipeptidase IadA, apparently one of two such enzymes in E. coli, an enzyme that degrades isoaspartyl dipeptides and may unblock degradation of proteins that cannot be repaired. This model also describes closely related proteins from other species (e.g. Clostridium perfringens, Thermoanaerobacter tengcongensis) that we assume to be equivalent in function. This family shows homology to dihydroorotases.
Probab=100.00 E-value=5.1e-32 Score=257.83 Aligned_cols=339 Identities=22% Similarity=0.280 Sum_probs=213.7
Q ss_pred eEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCC
Q 011766 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (478)
Q Consensus 21 ~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~ 100 (478)
++|+|++|++++. +...+|+|+||||++|++..+....++ ....++|++|++|+|||||.|+|+.... ..+
T Consensus 2 ~li~n~~v~~~~~----~~~~dvlI~~gkI~~Ig~~~~~~~~~~-~~~~i~d~~G~~v~PGlID~HvH~~~gg----~~~ 72 (389)
T TIGR01975 2 TLLKGAEVYAPEY----IGKKDILIANDKIIAIADEIPSTKDFV-PNCVVVGLEGMIAVPGFIDQHVHIIGGG----GEG 72 (389)
T ss_pred EEEECcEEEcCCc----CcceeEEEECCEEEEEcCCccccccCC-CCeEEECCCCCEEccCEeehhhcccccc----ccC
Confidence 4799999997632 345699999999999998754321111 1234556699999999999999985421 000
Q ss_pred CCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCc-----cC---HHHHHHHHHHhCCeEEEeccccc
Q 011766 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QH---VSEMAKAVELLGLRACLVQSTMD 172 (478)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~-----~~---~~~~~~~~~~~g~~~~~~~~~~~ 172 (478)
.. ...+++ ..+.+++++||||++++.+ .+ ..+..+.+...|++.+.....++
T Consensus 73 ~~-------------~~~~~e-------~~~~e~l~~GvTTv~d~~g~~~~~~~~~~~~a~~~al~~~Gir~~~~~g~~~ 132 (389)
T TIGR01975 73 GP-------------TTRTPE-------LTLSDITKGGVTTVVGLLGTDGITRHMESLLAKARALEEEGISCYMLTGAYH 132 (389)
T ss_pred CC-------------ccCCHH-------HHHHHHHhCCcEEEecCcccCccccChhhHHHHHHHHHHhCCEEEEEccccc
Confidence 00 011222 1367789999999999764 22 23567788999999987654432
Q ss_pred CCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcC----
Q 011766 173 CGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK---- 248 (478)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~---- 248 (478)
. |..-. +.. .. ......+... +.-++...-+-....+.+.+.++.+.++..|
T Consensus 133 ~----p~~t~---t~~-~~------------~d~~~~d~ii----G~~~ia~sd~r~~~~~~~~l~~~~~~~~~~g~~~~ 188 (389)
T TIGR01975 133 V----PSRTI---TGS-VE------------SDLLLIDKVI----GVGEIAISDHRSAQPTVEHLTNMAAEARVGGLLGG 188 (389)
T ss_pred C----CCccc---ccc-hh------------hheeeehhhc----ccceEEEccCcCCCCCHHHHHHHHHHHHHHHHhcC
Confidence 2 11000 000 00 0001111111 1112335555556678889999999999998
Q ss_pred Cc--eeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCC------hhHHHHHHhcCCeEEECccchh
Q 011766 249 TG--IHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN------HTEIGLLSRAGVKVSHCPASAM 320 (478)
Q Consensus 249 ~~--v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~------~~~~~~~~~~~~~~~~~p~~~~ 320 (478)
++ +++|....+...+.+.......+-++.. -|.++++ ++.++.+++ +..+.++-....
T Consensus 189 ~~g~~~vH~g~~~~~l~~l~~~~~~~di~~~~-------------f~pth~~r~~~l~~~~i~~~~~-gg~iDv~~~~~~ 254 (389)
T TIGR01975 189 KPGIVNFHVGDSKRALQPIYELVENTDVPITQ-------------FLPTHINRNVPLFEAGLEFAKK-GGTIDLTSSIDP 254 (389)
T ss_pred CCcEEEEEeCCchhhHHHHHHHHHhcCCChhh-------------eecCccCCCHHHHHHHHHHHHh-CCcEEEeCCCCc
Confidence 88 9999988776554433322211111111 1222333 345555555 444544422221
Q ss_pred h-c--cCCC---cHHHHHHCCCc---EEEcCCCCCCCCCc---------------CHHHHHHHHHHHhcccccccCCCCC
Q 011766 321 R-M--LGFA---PIKEMLHADIC---VSLGTDGAPSNNRM---------------SIVDEMYLASLINKGREVFANGTTD 376 (478)
Q Consensus 321 ~-~--~~~~---~~~~~~~~gv~---v~~gsD~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (478)
. . ...+ .++.++++|++ ++++||+..+.+.. +++.+|+.+..
T Consensus 255 ~~l~~~~~~~~~~~~~~~~~Gv~~~~i~isSD~~gs~p~~~~~g~~~~~g~g~~~sl~~~~~~lv~-------------- 320 (389)
T TIGR01975 255 QFRKEGEVAPAEGIKKALEAGVPLEKVTFSSDGNGSQPFFDENGELTGLGVGSFETLFEEVREAVK-------------- 320 (389)
T ss_pred cchhccccChHHHHHHHHHcCCCcceEEEEeCCCCCCCccccccccccCCcCcHHHHHHHHHHHHH--------------
Confidence 1 1 1223 45889999997 59999975321111 23444443322
Q ss_pred CCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEEC
Q 011766 377 PAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN 456 (478)
Q Consensus 377 ~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~ 456 (478)
..++|+++||+++|.|||++||++ ++|+|++|++|||++||.+ ..+..||.+|++++++
T Consensus 321 ~g~ls~~eal~~~T~npA~~Lgl~-~~G~I~~G~~ADlvild~~--------------------~~i~~v~~~G~~v~~~ 379 (389)
T TIGR01975 321 DGDVPLEKALRVITSNVAGVLNLT-GKGEISPGNDADLVVLDPD--------------------LRIHSVIARGKLMVKD 379 (389)
T ss_pred hCCCCHHHHHHHHHHHHHHHhCCC-CCCeECCCCcCCEEEEcCC--------------------CCEEEEEECCEEEEEC
Confidence 124999999999999999999996 6899999999999999986 4789999999999999
Q ss_pred Ceeec
Q 011766 457 KKILL 461 (478)
Q Consensus 457 g~~~~ 461 (478)
|+++.
T Consensus 380 g~~~~ 384 (389)
T TIGR01975 380 GKACV 384 (389)
T ss_pred CEEEe
Confidence 99863
No 45
>PRK06846 putative deaminase; Validated
Probab=100.00 E-value=1.3e-31 Score=261.02 Aligned_cols=374 Identities=15% Similarity=0.119 Sum_probs=235.3
Q ss_pred eeEEEecEEEeeCCC------CceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhh
Q 011766 20 TMILHNAVIVTMDKE------SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQL 93 (478)
Q Consensus 20 ~~~i~n~~I~t~d~~------~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~ 93 (478)
.+.|+|+++..+... .......+|.|++|+|++|++.... +..+.++||++|++|+|||||+|+|+....
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~g~I~~i~~~~~~----~~~~~~~id~~g~~v~Pg~iD~H~H~~~~~ 80 (410)
T PRK06846 5 HYWLTNVRLETGFDYENGVIVQTETALCTLEIQDGKIVAIRPNKQV----PDATLPTYDANGLLMLPAFREMHIHLDKTY 80 (410)
T ss_pred ceEEEeeecCccccccCceecCCceeeEEEEEECCEEEEeecCCCC----CCCCCceEeCCCCEEecCEEeeeecccchh
Confidence 467788776543220 1223456999999999999975321 112457999999999999999999998755
Q ss_pred hccccC----CCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCH-------HHHHHHHHHhCC
Q 011766 94 AKGIAD----DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV-------SEMAKAVELLGL 162 (478)
Q Consensus 94 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~-------~~~~~~~~~~g~ 162 (478)
.++... ...+.+|+....+...... +............++..|+|+++++..... ....+.......
T Consensus 81 ~~~~~~~~~~~~g~~~~l~~~~~~~~~~~--~~~~~~a~~~l~~~~~~Gtt~~r~~v~~~~~~~~~~~~a~~e~l~e~~~ 158 (410)
T PRK06846 81 YGGPWKACRPAKTIQDRIELEQKELPELL--PTTQERAEKLIELLQSKGATHIRSHCNIDPVIGLKNLENLQAALERYKD 158 (410)
T ss_pred hccchhhcCCcccHHHHHhhhhhhHHHhH--HHHHHHHHHHHHHHHhCCccEEEEEEeeCcccccchHHHHHHHHHHhhC
Confidence 443221 1223455533222111100 111122224556677889999876543211 222233333222
Q ss_pred eEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHH
Q 011766 163 RACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRD 242 (478)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 242 (478)
........+. ..+.. . . .....+++....+...+. .+.+......+++.+.++++
T Consensus 159 ~v~~~~~a~~-~~g~~---------~--~------------~~~~lL~~al~~Ga~~i~-gl~p~~~~~~~~~~l~~~~~ 213 (410)
T PRK06846 159 GFTYEIVAFP-QHGLL---------R--S------------NSEPLMREAMKMGAHLVG-GVDPASVDGAIEKSLDTMFQ 213 (410)
T ss_pred cceEEEEecc-CcccC---------C--c------------cHHHHHHHHHHcCCCEEe-CCCCccCCcCHHHHHHHHHH
Confidence 2111111110 00000 0 1 333455555555444332 23445455677889999999
Q ss_pred HHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccC---ChhHHH----HHHhcCCeEEEC
Q 011766 243 MAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV---NHTEIG----LLSRAGVKVSHC 315 (478)
Q Consensus 243 ~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~---~~~~~~----~~~~~~~~~~~~ 315 (478)
+|+++|+++++|+.+.......... ..++.+...+... +..+.|+..+ ++++++ ++++.|+.++.+
T Consensus 214 lA~~~g~~v~~Hv~e~~~~~~~~~~------~~~~~~~~~gl~~-~v~~~H~~~l~~~~~~e~~~li~~la~~g~~v~~~ 286 (410)
T PRK06846 214 IAVDFNKGVDIHLHDTGPLGVATIK------YLVETTEEAQWKG-KVTISHAFALGDLNEEEVEELAERLAAQGISITST 286 (410)
T ss_pred HHHHhCCCcEEEECCCCChhHHHHH------HHHHHHHHhCCCC-CEEEEecchhhcCCHHHHHHHHHHHHHcCCeEEEe
Confidence 9999999999999876543322211 2466777777666 8999999975 666644 689999988865
Q ss_pred ccchhhccCCCcHHHHHHCCCcEEEcCCCCC----CCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhH
Q 011766 316 PASAMRMLGFAPIKEMLHADICVSLGTDGAP----SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATI 391 (478)
Q Consensus 316 p~~~~~~~~~~~~~~~~~~gv~v~~gsD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~ 391 (478)
.. ...+.+|+++|+++|+++++|||++. .....+++++++.+..... +... -++.++++++|.
T Consensus 287 ~~---~~~g~~p~~~l~~~Gv~v~lGtD~~~~~~~p~~~~d~~~~~~~~~~~~~--------~~~~--~~~~~~l~~~T~ 353 (410)
T PRK06846 287 VP---IGRLHMPIPLLHDKGVKVSLGTDSVIDHWSPFGTGDMLEKANLLAELYR--------WSDE--RSLSRSLALATG 353 (410)
T ss_pred CC---CCCCCCCHHHHHhCCCeEEEecCCCCCCCcCCCCCCHHHHHHHHHHHhc--------CCCH--HHHHHHHHHHcC
Confidence 43 22568999999999999999999752 2245679998886654432 1111 246689999998
Q ss_pred HHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEEC
Q 011766 392 NGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN 456 (478)
Q Consensus 392 ~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~ 456 (478)
++ +.+++++.+|+|++||.|||||+|.+. +...+ .....+..||++|++||..
T Consensus 354 ~a-~~l~~~~~~G~l~~G~~ADlvlld~~~--------~~~~~---~~~~~v~~v~~~G~~v~~~ 406 (410)
T PRK06846 354 GV-LPLNDEGERVWPKVGDEASFVLVDASC--------SAEAV---ARQSPRTAVFHKGQLVAGS 406 (410)
T ss_pred Cc-cccccCCCccCCCCCCcccEEEEeCCC--------hHHHH---HhcCCceEEEECCEEEeee
Confidence 84 568877778999999999999999862 11111 1236899999999999985
No 46
>PRK09236 dihydroorotase; Reviewed
Probab=100.00 E-value=3.2e-32 Score=267.60 Aligned_cols=203 Identities=19% Similarity=0.237 Sum_probs=134.8
Q ss_pred HHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCee---eeeeccCChhHHHHHHhcCCeEE
Q 011766 237 LLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLL---SAHTVWVNHTEIGLLSRAGVKVS 313 (478)
Q Consensus 237 l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---i~h~~~~~~~~~~~~~~~~~~~~ 313 (478)
+.++++++++.++++++|..+.....+.+.. ....+.+.. ..|+.+++++++.. .+..+.
T Consensus 218 v~~~~~la~~~~~~~hi~h~st~~~~~~i~~--------------~~~~g~~vt~e~~~H~l~l~~~~~~~---~~~~~~ 280 (444)
T PRK09236 218 SSLAVSLAKKHGTRLHVLHISTAKELSLFEN--------------GPLAEKRITAEVCVHHLWFDDSDYAR---LGNLIK 280 (444)
T ss_pred HHHHHHHHHHHCCCEEEEeCCCHHHHHHHHH--------------HHHCCCCEEEEEchhhhhcCHHHHhc---cCceEE
Confidence 4566777778888887766665444333221 111122332 24666777777663 477788
Q ss_pred ECccchhhc-cCCCcHHHHHHCCCcEEEcCCCCCCCC------------CcCHHHHHHHHHHHhcccccccCCCCCCCCC
Q 011766 314 HCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNN------------RMSIVDEMYLASLINKGREVFANGTTDPAAL 380 (478)
Q Consensus 314 ~~p~~~~~~-~~~~~~~~~~~~gv~v~~gsD~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 380 (478)
++|. ++. .+..++.+++++|+.+++|||+.++.. ....++.+ ...+.... .+.++
T Consensus 281 ~~Pp--lr~~~~~~~l~~~l~~G~i~~igtDh~p~~~~~k~~~~~~~~~G~~~~e~~-l~~l~~~v---------~~~~~ 348 (444)
T PRK09236 281 CNPA--IKTASDREALRQALADDRIDVIATDHAPHTWEEKQGPYFQAPSGLPLVQHA-LPALLELV---------HEGKL 348 (444)
T ss_pred ECCC--CCCHHHHHHHHHHHhCCCCcEEECCCCCCCHHHhcCCcccCCCCcccHHHH-HHHHHHHH---------HhcCC
Confidence 8886 332 456688899999999999999977521 11112211 11111110 12359
Q ss_pred CHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhc-----cCCCCeeEEEEccEEEEE
Q 011766 381 PAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYC-----MRTENVVSVMCNGQWVMK 455 (478)
Q Consensus 381 s~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~-----~~~~~v~~v~v~G~~v~~ 455 (478)
|++++++++|.|||+++|+. ++|+|++|++|||+|+|.+..+..+..++++...+. ....+|.+||++|++||+
T Consensus 349 ~~~~~~~~~t~~pA~~lgl~-~~G~l~~G~~ADlvi~d~~~~~~~~~~~~~s~~~~sp~~g~~~~g~v~~t~v~G~~v~~ 427 (444)
T PRK09236 349 SLEKVVEKTSHAPAILFDIK-ERGFIREGYWADLVLVDLNSPWTVTKENILYKCGWSPFEGRTFRSRVATTFVNGQLVYH 427 (444)
T ss_pred CHHHHHHHHHHhHHHhcCCC-CCCccccCCcCCEEEEcCCCCEEEchHHhcccCCCCCCCCCEEeeeEEEEEECCEEEEE
Confidence 99999999999999999994 469999999999999999865544544544433222 223579999999999999
Q ss_pred CCeeecccHHHHHH
Q 011766 456 NKKILLLMRGRLFQ 469 (478)
Q Consensus 456 ~g~~~~~~~~~~~~ 469 (478)
+|+++....|++++
T Consensus 428 ~g~~~~~~~G~~~~ 441 (444)
T PRK09236 428 NGQLVESCRGQRLE 441 (444)
T ss_pred CCEEccCcCceEee
Confidence 99988655666554
No 47
>PRK06189 allantoinase; Provisional
Probab=100.00 E-value=6.2e-32 Score=266.12 Aligned_cols=377 Identities=18% Similarity=0.197 Sum_probs=219.2
Q ss_pred cceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccc
Q 011766 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~ 97 (478)
+++++|+|++|+++++ ...++|+|+||+|++|++... ..+.++||++|++|+|||||+|+|+....
T Consensus 2 ~~~~~i~~~~v~~~~~----~~~~~v~i~~G~I~~i~~~~~------~~~~~~iD~~g~~vlPG~ID~H~H~~~~~---- 67 (451)
T PRK06189 2 MYDLIIRGGKVVTPEG----VYRADIGIKNGKIAEIAPEIS------SPAREIIDADGLYVFPGMIDVHVHFNEPG---- 67 (451)
T ss_pred CccEEEECCEEEcCCC----cEEEEEEEECCEEEEecCCCC------CCCCeEEECCCCEEecCEEEeeeccCCCC----
Confidence 4688999999997542 245799999999999986532 12457999999999999999999983210
Q ss_pred cCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCC-cc-----CHHHHHHHHHHhCCeEEEecccc
Q 011766 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQ-----HVSEMAKAVELLGLRACLVQSTM 171 (478)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~-~~-----~~~~~~~~~~~~g~~~~~~~~~~ 171 (478)
... ........+.++++|||++++++ .. .........+.......+.....
T Consensus 68 --------------------~~~---~~~~~~~~~aa~~gGvTt~~~~p~~t~p~~~~~~~~~~~~~~~~~~~~~d~~~~ 124 (451)
T PRK06189 68 --------------------RTH---WEGFATGSAALAAGGCTTYFDMPLNSIPPTVTREALDAKAELARQKSAVDFALW 124 (451)
T ss_pred --------------------CCC---cccHHHHHHHHHhCCEEEEEECCCCCCCCCCcHHHHHHHHHHhCcCceEeEEEE
Confidence 000 01122234568899999999875 11 12222222222222211111111
Q ss_pred cCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEec---cccccCCHHHHHHHHHHHHHcC
Q 011766 172 DCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGI---RQIMNATDRLLLETRDMAREFK 248 (478)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~a~~~~ 248 (478)
. + . .. .....+..+...+...++.+... ......+...+.++++.+.+.+
T Consensus 125 ~-~--~--------~~----------------~~~~~l~~l~~~Gv~~~k~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 177 (451)
T PRK06189 125 G-G--L--------VP----------------GNLEHLRELAEAGVIGFKAFMSNSGTDEFRSSDDLTLYEGMKEIAALG 177 (451)
T ss_pred e-c--c--------cc----------------cCHHHHHHHHHcCCcEEEEEccccCCCCcCcCCHHHHHHHHHHHHhcC
Confidence 0 0 0 00 11112333333333334433221 1122345667888888888899
Q ss_pred CceeEeccCChhhhHHH--hhhcC-------CCCc-------hH-HHHhhhCCCCCCeeeeeeccCC-hhHHHHHHhcC-
Q 011766 249 TGIHMHVAEIPYENQVV--MDTRK-------VDHG-------TV-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG- 309 (478)
Q Consensus 249 ~~v~~H~~~~~~~~~~~--~~~~~-------~~~~-------~~-~~l~~~~~~~~~~~i~h~~~~~-~~~~~~~~~~~- 309 (478)
..+.+|+.......... ....+ ...+ .+ ..+......+.+..+.|.+... -+.++.+++.|
T Consensus 178 ~~~~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~P~~~E~~~v~~~l~la~~~g~~~hi~HiSt~~~~~~i~~~k~~g~ 257 (451)
T PRK06189 178 KILALHAESDALTRHLTTQARQQGKTDVRDYLESRPVVAELEAVQRALLYAQETGCPLHFVHISSGKAVALIAEAKKRGV 257 (451)
T ss_pred CeEEEECCChHHHHHHHHHHHhcCCCChhHccccCCHHHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCC
Confidence 99999996544211110 00000 0000 01 1222223334555566655421 13344445555
Q ss_pred -CeEEECccchhhc--------------------cCCCcHHHHHHCCCcEEEcCCCCCCCCC----cCHHHH--------
Q 011766 310 -VKVSHCPASAMRM--------------------LGFAPIKEMLHADICVSLGTDGAPSNNR----MSIVDE-------- 356 (478)
Q Consensus 310 -~~~~~~p~~~~~~--------------------~~~~~~~~~~~~gv~v~~gsD~~~~~~~----~~~~~~-------- 356 (478)
+.+.+||...... ....++.+++++|+.++++||+.++... .++++.
T Consensus 258 ~vt~ev~ph~L~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~~i~sDh~p~~~~~K~~~~~~~~~~G~~g~e 337 (451)
T PRK06189 258 DVSVETCPHYLLFTEEDFERIGAVAKCAPPLRSRSQKEELWRGLLAGEIDMISSDHSPCPPELKEGDDFFLVWGGISGGQ 337 (451)
T ss_pred cEEEEeCHHHhhcCHhHhhCcCCceEEeCCCCChhhHHHHHHHHhCCCceEEECCCCCCCHHHcCcCCcccCCCCceeHH
Confidence 5567788643210 0113445788999999999999876432 122211
Q ss_pred HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCc--------C
Q 011766 357 MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPV--------H 428 (478)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~--------~ 428 (478)
.....+.... ..+.++|++++++++|.|||++||+ +++|+|++|++|||+|+|.+..+..+. .
T Consensus 338 ~~l~~~~~~~--------~~~~~l~~~~~~~~~t~npA~~lgl-~~~G~l~~G~~ADlvi~d~~~~~~~~~~~~~~~~~~ 408 (451)
T PRK06189 338 STLLVMLTEG--------YIERGIPLETIARLLATNPAKRFGL-PQKGRLEVGADADFVLVDLDETYTLTKEDLFYRHKQ 408 (451)
T ss_pred HHHHHHHHHH--------HhcCCCCHHHHHHHHhhhHHHHhCC-CCCCcccCCCcCCEEEEcCCCCEEECHHHhhhcCCC
Confidence 2222222211 0133599999999999999999999 457999999999999999973221111 2
Q ss_pred ChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHH
Q 011766 429 DRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQL 470 (478)
Q Consensus 429 d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~ 470 (478)
+|+..... ..+|.+||++|++||++|+++....|+++++
T Consensus 409 ~p~~g~~~---~g~v~~tiv~G~~v~~~g~~~~~~~G~~~~~ 447 (451)
T PRK06189 409 SPYEGRTF---PGRVVATYLRGQCVYQDGEVFPPPRGQLLRP 447 (451)
T ss_pred CCcCCcEE---EeEEEEEEECCEEEEECCEEccCCCCcEecC
Confidence 33332211 2579999999999999999887777887754
No 48
>PRK13309 ureC urease subunit alpha; Reviewed
Probab=100.00 E-value=6.8e-32 Score=262.25 Aligned_cols=340 Identities=17% Similarity=0.174 Sum_probs=203.4
Q ss_pred cceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhh--h-----hhccCCCeEEeCCCCEEeecccccccccc
Q 011766 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL--Q-----QFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~--~-----~~~~~~~~viD~~G~~v~PGfID~H~H~~ 90 (478)
..+++|+|++|+++. .. +..++|.|+||||++|++..... . .+...++++||++|++|+|||||+|+|+.
T Consensus 67 ~~DlVI~Ng~ViD~~--~g-i~kaDI~IkdGrI~aIG~~~~p~~~~~v~~~~~~g~~tevIDa~G~iVtPG~ID~HvH~~ 143 (572)
T PRK13309 67 VLDLVITNVTIVDAR--LG-VIKADVGIRDGKIVGIGKSGNPSTMDGVTQGMVVGVSTDAISGEHLILTAAGIDTHIHLI 143 (572)
T ss_pred cCCEEEECeEEEcCC--CC-EEEEEEEEECCEEEEecCCCccccccccccccccCCCceEEECCCCEEEeCEEEeecccC
Confidence 578999999999542 23 35789999999999999743110 0 00112468999999999999999999982
Q ss_pred hhhhccccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc------------CH---HHHHH
Q 011766 91 QQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ------------HV---SEMAK 155 (478)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~------------~~---~~~~~ 155 (478)
. +. . ...++.+||||+++.+.. .. ..+.+
T Consensus 144 ~----------------------------P~--~------~~aAl~gGVTTvi~~G~gp~~~~n~~~~t~g~~~i~~~l~ 187 (572)
T PRK13309 144 S----------------------------PQ--Q------AYHALSNGVTTFFGGGIGPTDGTNGTTVTPGPWNIRQMLR 187 (572)
T ss_pred C----------------------------cc--h------HHHHHcCceEEEEecCCCCccCCCCCCCCCCHHHHHHHHH
Confidence 1 00 0 135799999999964311 11 12222
Q ss_pred HHHHhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHH
Q 011766 156 AVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDR 235 (478)
Q Consensus 156 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (478)
.++...+.... . +.+ + . . ...+ +.+....+...++ .+..+..+++
T Consensus 188 ~a~~~pvn~g~----~--gkg----~----~-~---------------~~~~-l~el~~aGa~gfk----~~~d~g~t~~ 232 (572)
T PRK13309 188 SIEGLPVNVGI----L--GKG----N----S-Y---------------GRGP-LLEQAIAGVAGYK----VHEDWGATAA 232 (572)
T ss_pred HhccCCcCEEE----E--cCC----C----C-C---------------CHHH-HHHHHhcCcEEEE----ecCcCCcCHH
Confidence 22222222111 0 000 0 0 0 1111 2222233322222 2333455888
Q ss_pred HHHHHHHHHHHcCCceeEeccCCh--hhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCe--
Q 011766 236 LLLETRDMAREFKTGIHMHVAEIP--YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK-- 311 (478)
Q Consensus 236 ~l~~~~~~a~~~~~~v~~H~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~-- 311 (478)
.+.++++.++++++++.+|+.... ...+...... ..++++.++..+....+ .++.++.+...++-
T Consensus 233 ~L~~aLe~A~~~gv~VaiH~d~lnE~g~vE~~~aa~--~grpih~~H~~Gagggh---------apd~~~~~~~~~~~~~ 301 (572)
T PRK13309 233 ALRHALRVADEVDIQVAVHTDSLNECGYVEDTIDAF--EGRTIHTFHTEGAGGGH---------APDIIKVASQTNVLPS 301 (572)
T ss_pred HHHHHHHHHHhcCCEEEEeCCccccchhHHHHHHHh--CCCceeeeeccCcccCC---------chhHHHhcCCCCcccC
Confidence 999999999999999999964322 1122222111 11223333332222110 01111111111111
Q ss_pred -------------------EEECccc-------------hhhccCCCcHHHHHHCCCcEEEcCCCCCCC-CCcCHHHHHH
Q 011766 312 -------------------VSHCPAS-------------AMRMLGFAPIKEMLHADICVSLGTDGAPSN-NRMSIVDEMY 358 (478)
Q Consensus 312 -------------------~~~~p~~-------------~~~~~~~~~~~~~~~~gv~v~~gsD~~~~~-~~~~~~~~~~ 358 (478)
+.+|... ..+.....+++.+++.|+.++++||++... ...+++..++
T Consensus 302 st~pt~p~~~~~~~e~~~m~m~~h~l~~~~~~D~~~a~srig~e~~~a~~~l~daGa~~~~gSD~pv~gr~~~~p~~~iq 381 (572)
T PRK13309 302 STNPTLPYGVNSQAELFDMIMVCHNLNPNVPADVAFAESRVRPETIAAENVLHDMGVISMFSSDSQAMGRVGENWLRAIQ 381 (572)
T ss_pred CCCCCCCCcccchHhhhchhhhhccCCCCCCCChhHHHHhhCchhhcchhHHHhCCCEEEEcCCCCcccCCcccHHHHHH
Confidence 1111110 012244678899999999999999997532 2467788888
Q ss_pred HHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhcc
Q 011766 359 LASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCM 438 (478)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~ 438 (478)
.+......+..........+.+++.+||+++|.|||+++|+++++|+|++||.||||||+++.+.
T Consensus 382 ~Av~rk~~~g~l~~~~~~~~~~~v~~aL~~yT~n~A~a~g~e~~~GsLe~Gk~ADlvvld~d~f~--------------- 446 (572)
T PRK13309 382 TADAMKAARGKLPEDAAGNDNFRVLRYVAKITINPAITQGVSHVIGSVEVGKMADLVLWEPRFFG--------------- 446 (572)
T ss_pred HHHHHHhccCCCCccCCCcccccHHHHHHHHhHHHHHHcCcccCccccCCCCcCCEEEEchhhcC---------------
Confidence 77765432222111111245689999999999999999999999999999999999999987442
Q ss_pred CCCCeeEEEEccEEEEEC-Cee
Q 011766 439 RTENVVSVMCNGQWVMKN-KKI 459 (478)
Q Consensus 439 ~~~~v~~v~v~G~~v~~~-g~~ 459 (478)
.++..||++|+++|.. |..
T Consensus 447 --~~~~~vi~~G~iv~~~~gd~ 466 (572)
T PRK13309 447 --AKPKMVIKGGMINWAAMGDP 466 (572)
T ss_pred --CCccEEEECCEEEEecCCCc
Confidence 4678999999999988 554
No 49
>cd01315 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.
Probab=100.00 E-value=1e-31 Score=265.93 Aligned_cols=378 Identities=18% Similarity=0.174 Sum_probs=214.7
Q ss_pred eeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccC
Q 011766 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (478)
Q Consensus 20 ~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~ 99 (478)
|++|+|++|++++ . ..+++|+|+||||++|++.... ..+.++||++|++|+|||||+|+|+....
T Consensus 1 dl~i~~~~v~~~~---~-~~~~~v~I~~g~I~~i~~~~~~-----~~~~~~iDa~G~~v~PG~ID~H~H~~~~~------ 65 (447)
T cd01315 1 DLVIKNGRVVTPD---G-VREADIAVKGGKIAAIGPDIAN-----TEAEEVIDAGGLVVMPGLIDTHVHINEPG------ 65 (447)
T ss_pred CEEEECCEEECCC---C-ceEeEEEEECCEEEEEeCCCCC-----CCCCeEEECCCCEEeccEeeceeccCCCC------
Confidence 5799999999652 2 3457999999999999875321 13568999999999999999999983210
Q ss_pred CCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc-----CHHHHHH-HHHHhCCeEEEecccccC
Q 011766 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAK-AVELLGLRACLVQSTMDC 173 (478)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~-----~~~~~~~-~~~~~g~~~~~~~~~~~~ 173 (478)
.... .......+.++++||||+++++.. ......+ ..+.......+......
T Consensus 66 ------------------~~~~---e~~~~~s~aal~gGvTtv~d~p~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~- 123 (447)
T cd01315 66 ------------------RTEW---EGFETGTKAAAAGGITTIIDMPLNSIPPTTTVENLEAKLEAAQGKLHVDVGFWG- 123 (447)
T ss_pred ------------------cccc---ccHHHHHHHHHhCCceEEEeCCCCCCCCcCCHHHHHHHHHHhccCceeeEEEEE-
Confidence 0000 111233456799999999998621 1112222 22222111111111100
Q ss_pred CCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEecccc---ccCCHHHHHHHHHHHHHcCCc
Q 011766 174 GEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQI---MNATDRLLLETRDMAREFKTG 250 (478)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~a~~~~~~ 250 (478)
+ .. . ...+.++++.+.+...++.+...... ...+.+.+.++++.+++.|++
T Consensus 124 ~--~~--------~----------------~~~~ei~~l~~~G~~giKv~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~ 177 (447)
T cd01315 124 G--LV--------P----------------GNLDQLRPLDEAGVVGFKCFLCPSGVDEFPAVDDEQLEEAMKELAKTGSV 177 (447)
T ss_pred e--ec--------C----------------CCHHHHHHHHHcCCcEEEEEecccCCCCcccCCHHHHHHHHHHHHhcCCe
Confidence 0 00 0 01111223333344456554433221 235778899999999999999
Q ss_pred eeEeccCChhhhHHHhhhc---------CCCC--------chHHHHhhhCCCCCCeeeeeeccC-ChhHHHHHHhcC--C
Q 011766 251 IHMHVAEIPYENQVVMDTR---------KVDH--------GTVTFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAG--V 310 (478)
Q Consensus 251 v~~H~~~~~~~~~~~~~~~---------~~~~--------~~~~~l~~~~~~~~~~~i~h~~~~-~~~~~~~~~~~~--~ 310 (478)
+.+|+.............. .... .....+......+.+..+.|.+.. +-+.++.++..| +
T Consensus 178 v~vH~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~~~~~~~la~~~g~~ihi~h~s~~~~~~~i~~~~~~g~~i 257 (447)
T cd01315 178 LAVHAENPEITEALQEQAKAKGKRDYRDYLASRPVFTEVEAIQRILLLAKETGCRLHIVHLSSAEAVPLIREARAEGVDV 257 (447)
T ss_pred EEEEcCCHHHHHHHHHhHhhcCCCChHHhhccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCce
Confidence 9999976432211110000 0000 011222223333455666775532 123334444555 3
Q ss_pred eEEECccchhhc-----------cCCC---------cHHHHHHCCCcEEEcCCCCCCCCC------cCHHH--------H
Q 011766 311 KVSHCPASAMRM-----------LGFA---------PIKEMLHADICVSLGTDGAPSNNR------MSIVD--------E 356 (478)
Q Consensus 311 ~~~~~p~~~~~~-----------~~~~---------~~~~~~~~gv~v~~gsD~~~~~~~------~~~~~--------~ 356 (478)
.+.+||...... ...+ .+.++++.|...+++||+.++... .+++. +
T Consensus 258 ~~e~~~h~l~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~g~i~~i~SDh~p~~~~~k~~~~~~~~~~~~g~~g~~ 337 (447)
T cd01315 258 TVETCPHYLTFTAEDVPDGGTEFKCAPPIRDAANQEQLWEALENGDIDMVVSDHSPCTPELKLLGKGDFFKAWGGISGLQ 337 (447)
T ss_pred EEEeccccEEEcHHHccCCCCceEECCCCCChHHHHHHHHHHhCCceeEEeCCCCCCCHHHhccCCCChhhCCCCeeEHH
Confidence 455677532210 0112 233567889999999999875310 11111 0
Q ss_pred HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCc-----CChh
Q 011766 357 MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPV-----HDRI 431 (478)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~-----~d~~ 431 (478)
..+..+... .....++|++++++++|.|||+++|+++++|+|++|++|||||+|.+..+.... .++.
T Consensus 338 ~~~~~~~~~--------~~~~~~~~~~~~~~~~t~~pa~~~g~~~~~G~l~~g~~Ad~~v~d~~~~~~~~~~~~~~~~~~ 409 (447)
T cd01315 338 LGLPVMLTE--------AVNKRGLSLEDIARLMCENPAKLFGLSHQKGRIAVGYDADFVVWDPEEEFTVDAEDLYYKNKI 409 (447)
T ss_pred HhHHHHHHH--------HHHcCCCCHHHHHHHHhHHHHHHhCCCCCCccccCCCCCCEEEEcCCCCEEEcHHHccccCCC
Confidence 101111100 001236999999999999999999997678999999999999999874221111 1111
Q ss_pred hhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHH
Q 011766 432 TSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLF 468 (478)
Q Consensus 432 ~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~ 468 (478)
+-+.......+|.+||++|++||++|+++..+.|+++
T Consensus 410 ~~~~g~~~~g~v~~ti~~G~~v~~~~~~~~~~~G~~~ 446 (447)
T cd01315 410 SPYVGRTLKGRVHATILRGTVVYQDGEVVGEPLGQLL 446 (447)
T ss_pred CCccCeEEeeeEEEEEECCEEEEECCeEccCCCceEe
Confidence 1111112235799999999999999999865566654
No 50
>PLN02795 allantoinase
Probab=100.00 E-value=1.2e-31 Score=265.38 Aligned_cols=383 Identities=16% Similarity=0.154 Sum_probs=222.9
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~ 96 (478)
++.+++|+|++|++++ .. ..++|+|+||+|++|++....+. ...+.++||++|++|+|||||+|+|+....
T Consensus 42 ~~~~~vi~~~~vv~~~---~~-~~~~v~i~dG~I~~I~~~~~~~~--~~~~~~~ida~G~~v~PG~ID~H~H~~~~~--- 112 (505)
T PLN02795 42 PWPHFVLYSKRVVTPA---GV-IPGAVEVEGGRIVSVTKEEEAPK--SQKKPHVLDYGNAVVMPGLIDVHVHLNEPG--- 112 (505)
T ss_pred cccceEEECCEEEECC---Ce-EEEEEEEECCEEEEecCcccccc--ccCCCEEEECCCCEEecCEEecccCcCCCC---
Confidence 3479999999999743 22 35799999999999987432110 012458999999999999999999983210
Q ss_pred ccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCc-cCH----HHHHHHHHHhCCeEEEecccc
Q 011766 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-QHV----SEMAKAVELLGLRACLVQSTM 171 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~-~~~----~~~~~~~~~~g~~~~~~~~~~ 171 (478)
.. .+.......+.++.+|||+++++.. ..+ ....+..... ......+
T Consensus 113 ---------------------~~---~~e~~~~~~~aa~~gGvTtv~dmp~~~~P~~~~~~~~~~~~~~----~~~~~~v 164 (505)
T PLN02795 113 ---------------------RT---EWEGFPTGTKAAAAGGITTLVDMPLNSFPSTTSVETLELKIEA----AKGKLYV 164 (505)
T ss_pred ---------------------cc---chhHHHHHHHHHHcCCcEEEECCCCCCCCCCChHHHHHHHHHH----hccCcee
Confidence 00 0122334556688899999999862 211 1222111111 1111111
Q ss_pred cCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccc---cCCHHHHHHHHHHHHHcC
Q 011766 172 DCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIM---NATDRLLLETRDMAREFK 248 (478)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~a~~~~ 248 (478)
+.+ +.... ... .. ...+.+.++...+...++.+.+++..+ ..+.+.+.++++.++++|
T Consensus 165 d~~--~~~~~----~~~-~~------------~~~~~l~~~~~~G~~g~k~f~~~~~~~~~~~~~~~~l~~~~~~a~~~g 225 (505)
T PLN02795 165 DVG--FWGGL----VPE-NA------------HNASVLEELLDAGALGLKSFMCPSGINDFPMTTATHIKAALPVLAKYG 225 (505)
T ss_pred eee--ceecc----cCc-ch------------hHHHHHHHHHHCCCcEEEEEecccCCCCcccCCHHHHHHHHHHHHHhC
Confidence 111 00000 000 00 122333333333443366655554433 567789999999999999
Q ss_pred CceeEeccCChhhh-HHHhh-------hcCCC-Cc-----hH-HHHhhhCCC-------CCCeeeeeeccC--ChhHHHH
Q 011766 249 TGIHMHVAEIPYEN-QVVMD-------TRKVD-HG-----TV-TFLDKIEFL-------QNNLLSAHTVWV--NHTEIGL 304 (478)
Q Consensus 249 ~~v~~H~~~~~~~~-~~~~~-------~~~~~-~~-----~~-~~l~~~~~~-------~~~~~i~h~~~~--~~~~~~~ 304 (478)
+++++|+....-.. ..... .+... .. .+ ..+...... +.+..+.|.+.. +-+.++.
T Consensus 226 ~~v~iH~E~~~l~~~~~~~~~~~~~~~~~~~~rP~~aE~~ai~~~~~la~~~~~~~~~~g~~lhi~HiSt~~~~~e~i~~ 305 (505)
T PLN02795 226 RPLLVHAEVVSPVESDSRLDADPRSYSTYLKSRPPSWEQEAIRQLLEVAKDTRPGGVAEGAHVHIVHLSDAESSLELIKE 305 (505)
T ss_pred CEEEEecCChhHhhhhhhhhcCCcChhHhcccCCHHHHHHHHHHHHHHHHHhhhcccCCCCCEEEEECCChHHHHHHHHH
Confidence 99999997754211 00000 00000 00 11 112222222 556677776653 1234455
Q ss_pred HHhcC--CeEEECccchhhc-----------cCCCc---------HHHHHHCCCcEEEcCCCCCCCCCc------CHHH-
Q 011766 305 LSRAG--VKVSHCPASAMRM-----------LGFAP---------IKEMLHADICVSLGTDGAPSNNRM------SIVD- 355 (478)
Q Consensus 305 ~~~~~--~~~~~~p~~~~~~-----------~~~~~---------~~~~~~~gv~v~~gsD~~~~~~~~------~~~~- 355 (478)
+++.| +.+.+||.+.... .-.+| +.+.+..|...+++|||.|+.... +++.
T Consensus 306 ak~~G~~Vt~Ev~ph~L~l~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~i~sDHap~~~~~K~~~~~~~~~a 385 (505)
T PLN02795 306 AKAKGDSVTVETCPHYLAFSAEEIPDGDTRYKCAPPIRDAANRELLWKALLDGDIDMLSSDHSPSPPDLKLLEEGNFLRA 385 (505)
T ss_pred HHHCCCcEEEEeChhhhcccHHHccCCCCceEEcCCCCChHHHHHHHHHHhCCCceEEecCCCCCChHHhccCcCCHhhC
Confidence 56666 6677888743210 01123 336778899999999998874211 1111
Q ss_pred -------HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcC
Q 011766 356 -------EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVH 428 (478)
Q Consensus 356 -------~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~ 428 (478)
+.....+... ..+.++|++++++++|.|||+++|+ +++|.|++|++|||||+|.+..+....+
T Consensus 386 ~~G~~gle~~l~~~~~~---------~~~~~l~l~~~v~~~s~~pA~~~gl-~~~G~l~~G~~ADlvi~d~~~~~~v~~~ 455 (505)
T PLN02795 386 WGGISSLQFVLPATWTA---------GRAYGLTLEQLARWWSERPAKLAGL-DSKGAIAPGKDADIVVWDPEAEFVLDES 455 (505)
T ss_pred CCCceeHHHHHHHHHHH---------HHHcCCCHHHHHHHHHHHHHHHhCC-CCCCccCCCCccCEEEEcCCcceEECcc
Confidence 0111111111 0234699999999999999999999 5679999999999999998743221111
Q ss_pred ----------ChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHH
Q 011766 429 ----------DRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLF 468 (478)
Q Consensus 429 ----------d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~ 468 (478)
.|+... .-..+|.+||++|++||++|+++....|+++
T Consensus 456 ~~~~s~~~~~sp~~G~---~l~g~v~~tiv~G~~v~~~g~~~~~~~G~~~ 502 (505)
T PLN02795 456 YPIYHKHKSLSPYLGT---KLSGKVIATFVRGNLVFLEGKHAKQACGSPI 502 (505)
T ss_pred hhhhhcCCCcCCCCCe---EEEeEEEEEEECCEEEEECCeEcCCCCCeEe
Confidence 122211 1135799999999999999998744445543
No 51
>PRK13404 dihydropyrimidinase; Provisional
Probab=100.00 E-value=4.2e-32 Score=267.76 Aligned_cols=382 Identities=16% Similarity=0.170 Sum_probs=225.9
Q ss_pred cceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccc
Q 011766 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~ 97 (478)
+++++|+|++|+++.+ . .+++|+|+||+|++|++.. + .+.++||++|++|+|||||+|+|+.+....
T Consensus 3 ~~d~~i~~~~v~~~~~---~-~~~~i~I~dg~I~~i~~~~------~-~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~-- 69 (477)
T PRK13404 3 AFDLVIRGGTVVTATD---T-FQADIGIRGGRIAALGEGL------G-PGAREIDATGRLVLPGGVDSHCHIDQPSGD-- 69 (477)
T ss_pred CCcEEEECCEEEcCCC---c-eEEEEEEECCEEEEecCCC------C-CCCeEEECCCCEEecCEEEeEEcCCccccC--
Confidence 4678999999996432 2 3579999999999998642 1 255899999999999999999999431000
Q ss_pred cCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC----HHHHHHHHH-HhCCeEEEeccccc
Q 011766 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH----VSEMAKAVE-LLGLRACLVQSTMD 172 (478)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~----~~~~~~~~~-~~g~~~~~~~~~~~ 172 (478)
..... .......+.++.+|||++++++... ..+..+... ...-..........
T Consensus 70 -------------------~~~~~---e~~~~~s~aa~~gGvTtv~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~ 127 (477)
T PRK13404 70 -------------------GIMMA---DDFYTGTVSAAFGGTTTVIPFAAQHRGQSLREAVEDYHRRAAGKAVIDYAFHL 127 (477)
T ss_pred -------------------Ccccc---chHHHHHHHHHcCCccEEEEccCCCCCCCHHHHHHHHHHHhccCcEEEEEEEE
Confidence 00000 1223344567899999999976322 222222211 11111111110000
Q ss_pred CCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCcee
Q 011766 173 CGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIH 252 (478)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~ 252 (478)
+. ...... ...+.+..+...+...++++..... ...+++.+.++++.++++|.++.
T Consensus 128 ---~~--------~~~~~~------------~~~~~v~~l~~~G~~~iKi~~~~~~-~~~~~~~l~~~~~~a~~~g~~V~ 183 (477)
T PRK13404 128 ---IV--------ADPTEE------------VLTEELPALIAQGYTSFKVFMTYDD-LKLDDRQILDVLAVARRHGAMVM 183 (477)
T ss_pred ---Ee--------cCCChh------------hHHHHHHHHHHcCCCEEEEEecCCC-CCCCHHHHHHHHHHHHhcCCEEE
Confidence 00 000000 2223344444555566776543222 34677889999999999999999
Q ss_pred EeccCChhhhHHHhh--hcC-------CCCc--------hHHHHhhhCCCCCCeeeeeeccCC-hhHHHHHHhcC--CeE
Q 011766 253 MHVAEIPYENQVVMD--TRK-------VDHG--------TVTFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG--VKV 312 (478)
Q Consensus 253 ~H~~~~~~~~~~~~~--~~~-------~~~~--------~~~~l~~~~~~~~~~~i~h~~~~~-~~~~~~~~~~~--~~~ 312 (478)
+|+.+.......... ..+ ...+ ....+......+.+..+.|.+.-. -+.+..+++.| +.+
T Consensus 184 ~Hae~~~~i~~~~~~~~~~G~~~~~~~~~~rp~~~E~~~v~~~~~la~~~g~~~hi~Hvs~~~~~~~i~~~k~~g~~vt~ 263 (477)
T PRK13404 184 VHAENHDMIAWLTKRLLAAGLTAPKYHAISRPMLAEREATHRAIALAELVDVPILIVHVSGREAAEQIRRARGRGLKIFA 263 (477)
T ss_pred EEeCCHHHHHHHHHHHHHCCCcchhhccccCCHHHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 999764432100000 000 0000 011222233445566677766421 24455556666 445
Q ss_pred EECccchhhc-----c---------CC---------CcHHHHHHCCCcEEEcCCCCCCCCC-----------cCHH----
Q 011766 313 SHCPASAMRM-----L---------GF---------APIKEMLHADICVSLGTDGAPSNNR-----------MSIV---- 354 (478)
Q Consensus 313 ~~~p~~~~~~-----~---------~~---------~~~~~~~~~gv~v~~gsD~~~~~~~-----------~~~~---- 354 (478)
.+||...... . -. ..+.+++..|...+++|||.|+... .+++
T Consensus 264 e~~ph~L~l~~~~~~~~~~~g~~~k~~Pplr~~~d~~aL~~~l~~G~id~i~sDHap~~~~eK~~~~~~~~~~~~~~~~~ 343 (477)
T PRK13404 264 ETCPQYLFLTAEDLDRPGMEGAKYICSPPPRDKANQEAIWNGLADGTFEVFSSDHAPFRFDDTDGKLAAGANPSFKAIAN 343 (477)
T ss_pred EEChhhhccCHHHhcCccccCCceEECCCCCChHHHHHHHHHHhCCCceEEecCCCCCCcccchhhhhccCCCCHhhCCC
Confidence 6888753211 0 01 2334677889999999999887411 1122
Q ss_pred ----HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCc---
Q 011766 355 ----DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPV--- 427 (478)
Q Consensus 355 ----~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~--- 427 (478)
-++....+..... ...++|++++++++|.|||+++|+.+++|+|++|++|||+++|.+..+..+.
T Consensus 344 G~~gie~~l~~ll~~~v--------~~~~ls~~~~~~~~t~~pA~~lgl~~~~G~i~~G~~ADlvivd~~~~~~v~~~~~ 415 (477)
T PRK13404 344 GIPGIETRLPLLFSEGV--------VKGRISLNRFVALTSTNPAKLYGLYPRKGAIAIGADADIAIWDPDREVTITNADL 415 (477)
T ss_pred CcccHHHHHHHHHHHHH--------HcCCCCHHHHHHHHHHHHHHHhCCCCCCceecCCCcCCEEEEcCCccEEEchHHh
Confidence 1222222222110 1235999999999999999999997678999999999999999985433322
Q ss_pred -----CChhhhhhhccCCCCeeEEEEccEEEEECCeeeccc-HHHHHH
Q 011766 428 -----HDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLM-RGRLFQ 469 (478)
Q Consensus 428 -----~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~-~~~~~~ 469 (478)
.+|+.... -..++..||++|++||++|+++..+ .|++++
T Consensus 416 ~~~~~~sp~~g~~---~~g~v~~tiv~G~vv~~~g~~~~~~~~G~~~~ 460 (477)
T PRK13404 416 HHAADYTPYEGMR---VTGWPVTVLSRGRVVVEDGELVAERGSGQFLA 460 (477)
T ss_pred cccCCCCcccceE---EeeeEEEEEECCEEEEECCEEecCCCceeEec
Confidence 12333221 1356889999999999999998544 577765
No 52
>PRK07575 dihydroorotase; Provisional
Probab=100.00 E-value=4.1e-32 Score=265.84 Aligned_cols=371 Identities=16% Similarity=0.244 Sum_probs=212.5
Q ss_pred cceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccc
Q 011766 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~ 97 (478)
+++++|+|++|+++++ ....++|+|+||+|++|++.... ....++||++|++|+|||||+|+|+....
T Consensus 2 ~~~~~i~~~~i~~~~~---~~~~~~I~I~dg~I~~ig~~~~~-----~~~~~vid~~g~~v~PG~ID~H~H~~~~~---- 69 (438)
T PRK07575 2 MMSLLIRNARILLPSG---ELLLGDVLVEDGKIVAIAPEISA-----TAVDTVIDAEGLTLLPGVIDPQVHFREPG---- 69 (438)
T ss_pred cceEEEECCEEECCCC---CEEeeeEEEECCEEEEecCCCCC-----CCCCeEEECCCCEEcccEEEeeeccCCCC----
Confidence 4678999999997532 23567999999999999874321 11358999999999999999999973210
Q ss_pred cCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC-----HHHHHHHHHHhCCeEEEeccccc
Q 011766 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELLGLRACLVQSTMD 172 (478)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~ 172 (478)
....+ ......+.++++|||++++++... ............-...+......
T Consensus 70 --------------------~~~~e---~~~~~~~aa~~gGvTt~~dmp~~~p~~~~~~~~~~~~~~a~~~~~v~~~~~~ 126 (438)
T PRK07575 70 --------------------LEHKE---DLFTASRACAKGGVTSFLEMPNTKPLTTTQAALDDKLARAAEKCVVNYGFFI 126 (438)
T ss_pred --------------------CcCcc---hHHHHHHHHHhCCEEEEEECCCCCCCCCcHHHHHHHHHHhccCcEEEEEEEc
Confidence 10111 222233467999999999986421 22222222222111111111110
Q ss_pred CCC--------------CCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEE--------------E
Q 011766 173 CGE--------------GLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIW--------------F 224 (478)
Q Consensus 173 ~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~ 224 (478)
... ++. .+........ . .+ ........+... ...+... .
T Consensus 127 ~~~~~~l~~l~~~~~~~g~~-~f~~~~~~~~-~------~~-~~~~~~~~~~~~----~~~v~~h~e~~~l~~~~~~~~~ 193 (438)
T PRK07575 127 GATPDNLPELLTANPTCGIK-IFMGSSHGPL-L------VD-EEAALERIFAEG----TRLIAVHAEDQARIRARRAEFA 193 (438)
T ss_pred cccccCHHHHHHhhCCeEEE-EEEeeCCCCc-c------cC-cHHHHHHHHHhC----CCEEEEeCcChHHHHhhhHhhc
Confidence 000 000 0000000000 0 00 000001111110 0111000 0
Q ss_pred ecccc-----ccCCH---HHHHHHHHHHHHcCCceeE-eccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeec
Q 011766 225 GIRQI-----MNATD---RLLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV 295 (478)
Q Consensus 225 ~~~~~-----~~~~~---~~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~ 295 (478)
+.... ..... +.+.+++++|++.|+++++ |+. .....+.+....+ ......+..-| .
T Consensus 194 g~~~~~~~~~~~p~~aE~~av~~~~~la~~~g~~lhi~HiS-t~~~v~~i~~~k~------------~~vt~ev~phh-L 259 (438)
T PRK07575 194 GISDPADHSQIQDEEAALLATRLALKLSKKYQRRLHILHLS-TAIEAELLRQDKP------------SWVTAEVTPQH-L 259 (438)
T ss_pred cCcCcccccccCcHHHHHHHHHHHHHHHHHHCCCEEEEECC-CHHHHHHHHHhcC------------CCEEEEEchhh-h
Confidence 00000 11122 4577888999999999998 887 3433332222110 11122233334 6
Q ss_pred cCChhHHHHHHhcCCeEEECccchhhc-cCCCcHHHHHHCCCcEEEcCCCCCCCC----------CcCH-HHHHHHHHHH
Q 011766 296 WVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNN----------RMSI-VDEMYLASLI 363 (478)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~v~~gsD~~~~~~----------~~~~-~~~~~~~~~~ 363 (478)
+++++++.. .+....++|. ++. .+..++.+++++|+.++++||+.|+.. ...+ ..++....+.
T Consensus 260 ~l~~~~~~~---~~~~~k~~PP--LR~~~d~~~L~~~l~~G~id~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~l~~l~ 334 (438)
T PRK07575 260 LLNTDAYER---IGTLAQMNPP--LRSPEDNEALWQALRDGVIDFIATDHAPHTLEEKAQPYPNSPSGMPGVETSLPLML 334 (438)
T ss_pred eeCHHHHhC---CCceEEEeCC--CCCHHHHHHHHHHHhCCCCCEEecCCCCCCHHHccCCcccCCCCcccHHHHHHHHH
Confidence 778777652 4666777887 333 456778889999999999999988742 1111 3344444443
Q ss_pred hcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcC--------Chhhhhh
Q 011766 364 NKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVH--------DRITSLV 435 (478)
Q Consensus 364 ~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~--------d~~~~~~ 435 (478)
... .+.++|++++++++|.|||++||+ +++|+|++|++|||||+|.+..+..+.+ +|+....
T Consensus 335 ~~~---------~~~~lsl~~~~~~~s~npAk~lgl-~~~G~L~~G~~ADlvi~D~~~~~~v~~~~~~s~~~~sp~~g~~ 404 (438)
T PRK07575 335 TAA---------MRGKCTVAQVVRWMSTAVARAYGI-PNKGRIAPGYDADLVLVDLNTYRPVRREELLTKCGWSPFEGWN 404 (438)
T ss_pred HHH---------hcCCCCHHHHHHHHhhhHHHHcCC-CCCCccCCCCcCCEEEEcCCCCEEEchHHccccCCCCCCCCCE
Confidence 321 123599999999999999999999 4469999999999999999854433322 2333222
Q ss_pred hccCCCCeeEEEEccEEEEECCeeecccHHHHH
Q 011766 436 YCMRTENVVSVMCNGQWVMKNKKILLLMRGRLF 468 (478)
Q Consensus 436 ~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~ 468 (478)
+ ..++..||++|++||++|+++.-..|+.+
T Consensus 405 ~---~G~v~~tiv~G~~v~~~g~~~~~~~G~~~ 434 (438)
T PRK07575 405 L---TGWPVTTIVGGQIVFDRGQVNTEVRGQAL 434 (438)
T ss_pred E---eeEEEEEEECCEEEEECCEEccCCCceEe
Confidence 2 24689999999999999998765455544
No 53
>PRK15446 phosphonate metabolism protein PhnM; Provisional
Probab=100.00 E-value=4e-31 Score=253.46 Aligned_cols=352 Identities=18% Similarity=0.166 Sum_probs=199.0
Q ss_pred cceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccc
Q 011766 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~ 97 (478)
+++++|+|++|++.++ .. +++|+|+||||++|++... ...++||++|++|+|||||+|+|....
T Consensus 1 ~~~~~i~~~~v~~~~~---~~-~~~i~i~~g~I~~i~~~~~-------~~~~~iDa~g~~v~PG~ID~H~h~~~~----- 64 (383)
T PRK15446 1 MMEMILSNARLVLPDE---VV-DGSLLIEDGRIAAIDPGAS-------ALPGAIDAEGDYLLPGLVDLHTDNLEK----- 64 (383)
T ss_pred CccEEEECcEEEcCCC---ce-eeeEEEECCEEEEecCCCC-------CCCceEeCCCCEEEeCeEEcccCCccc-----
Confidence 3679999999997542 33 6899999999999997432 134789999999999999999965310
Q ss_pred cCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCC-cc--C-----HH----HHHHHHH--HhCCe
Q 011766 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQ--H-----VS----EMAKAVE--LLGLR 163 (478)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~-~~--~-----~~----~~~~~~~--~~g~~ 163 (478)
.+..|.. ..++.+ .......++++.+||||+.|+. .. . .. .+..... ...-+
T Consensus 65 ----~~~p~~~-------~~~~~~---~~~~~~~~~a~~gG~Tt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (383)
T PRK15446 65 ----HLAPRPG-------VDWPAD---AALAAHDAQLAAAGITTVFDALSVGDEEDGGLRSRDLARKLIDAIEEARARGL 130 (383)
T ss_pred ----ccCCCCC-------CccchH---HHHHHHHHHHHhCCccEeeeeeEeccCCCCCcccHHHHHHHHHHHHHhhhcCc
Confidence 0011100 001111 2233455789999999999952 11 1 12 1112222 11111
Q ss_pred EEEecccccCCCCCCCcccccCCcccCCCCCCcccc-ccch-------hHHHHHHHhcCCCCCCeE-----EEE-ecccc
Q 011766 164 ACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFN-FVSS-------SQKELYAKHHHAADGRIR-----IWF-GIRQI 229 (478)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~~-----~~~-~~~~~ 229 (478)
.++.+.+...-....+.... ....... .....|. |... .....++.+.....+.+. ... .....
T Consensus 131 ~~vD~~~h~~~~~~~~~~~~-~l~~~~~-~g~~~~k~fm~~~p~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~~~~~~~~ 208 (383)
T PRK15446 131 LRADHRLHLRCELTNPDALE-LFEALLA-HPRVDLVSLMDHTPGQRQFRDLEKYREYYAGKYGLSDEEFDAFVEERIALS 208 (383)
T ss_pred hhccceeEEEEEecCcchHH-HHHHHhc-CCCcCEEEEeCCCCccccccCHHHHHHHHHhhcCCCHHHHHHHHHHHHHhH
Confidence 11111100000000000000 0000000 0000000 0000 000001111100000000 000 00112
Q ss_pred ccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcC
Q 011766 230 MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAG 309 (478)
Q Consensus 230 ~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~ 309 (478)
...+.+.++++++.|+++|+++..|..+....... ....+.. .+.| ..+.+.++.+++.|
T Consensus 209 ~~~~~e~i~~~v~~A~~~g~~v~sH~~~~~~~i~~--------------a~~~Gv~----~~e~--~~~~e~~~~~~~~g 268 (383)
T PRK15446 209 ARYAPPNRRAIAALARARGIPLASHDDDTPEHVAE--------------AHALGVA----IAEF--PTTLEAARAARALG 268 (383)
T ss_pred hhcCHHHHHHHHHHHHHCCCceeecCCCCHHHHHH--------------HHHcCCc----eeeC--CCcHHHHHHHHHCC
Confidence 23467889999999999999999999644332111 1111211 1223 34577788888889
Q ss_pred CeEEECccchhhc---cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 011766 310 VKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 386 (478)
Q Consensus 310 ~~~~~~p~~~~~~---~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al 386 (478)
+.+..++...++. .+..+++++++.|++++++||+.+. +++..+.... ...++|+++++
T Consensus 269 ~~v~~~~p~~~r~~~~~~~~~~~~~~~~Gv~~~lgSD~~p~----~~~~~~~~~~--------------~~~gls~~~al 330 (383)
T PRK15446 269 MSVLMGAPNVVRGGSHSGNVSALDLAAAGLLDILSSDYYPA----SLLDAAFRLA--------------DDGGLDLPQAV 330 (383)
T ss_pred CEEEeCCcccccCCcccchHhHHHHHHCCCcEEEEcCCChh----hHHHHHHHHH--------------HhcCCCHHHHH
Confidence 9888776543332 3456788899999999999998543 2333222111 12369999999
Q ss_pred HHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECC
Q 011766 387 RMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNK 457 (478)
Q Consensus 387 ~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g 457 (478)
+++|.|||+++|++++ |+|++|++|||+|+|.++. ...+..||++|++||+.+
T Consensus 331 ~~~T~npA~~lgl~~~-G~I~~G~~ADlvv~d~~~~-----------------~~~v~~v~~~G~~v~~~~ 383 (383)
T PRK15446 331 ALVTANPARAAGLDDR-GEIAPGKRADLVRVRRAGG-----------------LPVVRAVWRGGRRVFLAG 383 (383)
T ss_pred HHHhHHHHHHcCCCCC-cCcCCCCcCCEEEEcCCCC-----------------CcchheEEECCEEEEeCC
Confidence 9999999999999655 9999999999999999710 147889999999998753
No 54
>PRK09357 pyrC dihydroorotase; Validated
Probab=100.00 E-value=2.1e-31 Score=261.49 Aligned_cols=362 Identities=20% Similarity=0.215 Sum_probs=215.1
Q ss_pred ceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcccc
Q 011766 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (478)
Q Consensus 19 ~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~ 98 (478)
|+++|+|++|++++ ..+.+++|+|+||+|++|++... ..+.++||++|++|+|||||+|+|+...
T Consensus 1 ~~~~i~~~~v~~~~---~~~~~~~I~I~dg~I~~i~~~~~------~~~~~~iD~~g~~v~PG~ID~H~H~~~~------ 65 (423)
T PRK09357 1 MMILIKNGRVIDPK---GLDEVADVLIDDGKIAAIGENIE------AEGAEVIDATGLVVAPGLVDLHVHLREP------ 65 (423)
T ss_pred CcEEEEeEEEECCC---CCcceeeEEEECCEEEEeeCCCC------CCCCeEEECCCCEEeCCEEecccccCCC------
Confidence 35899999999643 34567899999999999986421 1245899999999999999999997321
Q ss_pred CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC--------HHHHHHHHHHhCCeEEEeccc
Q 011766 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------VSEMAKAVELLGLRACLVQST 170 (478)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~ 170 (478)
.....+ ......+.++++|||++.+++... .....+.....+...+.....
T Consensus 66 -----------------~~~~~e----~~~~~~~~a~~~GvTt~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (423)
T PRK09357 66 -----------------GQEDKE----TIETGSRAAAAGGFTTVVAMPNTKPVIDTPEVVEYVLDRAKEAGLVDVLPVGA 124 (423)
T ss_pred -----------------Cccccc----cHHHHHHHHHhCCCeEEEecCCCCCCCCcHHHHHHHHHHhccCCcccEEEEEE
Confidence 001111 112233446899999999976321 122333334445443333322
Q ss_pred ccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCc
Q 011766 171 MDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTG 250 (478)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~ 250 (478)
+..+ .. ..... +...+.+ . + +. .+..+..+..+++.+.++++.++++|.+
T Consensus 125 ~~~~--~~--------~~~~~------------~~~~l~~----~--g-v~-~~~~~~~~~~~~~~l~~~~~~a~~~g~~ 174 (423)
T PRK09357 125 ITKG--LA--------GEELT------------EFGALKE----A--G-VV-AFSDDGIPVQDARLMRRALEYAKALDLL 174 (423)
T ss_pred EEeC--CC--------CccHH------------HHHHHHh----C--C-cE-EEECCCcccCCHHHHHHHHHHHHhcCCE
Confidence 2211 00 00111 2222221 1 1 22 2445566677889999999999999999
Q ss_pred eeEeccCChhhhHHHh------hhcCCCC-ch------H-HHHhhhCCCCCCeeeeeeccCChhH-HHHHHhcC--CeEE
Q 011766 251 IHMHVAEIPYENQVVM------DTRKVDH-GT------V-TFLDKIEFLQNNLLSAHTVWVNHTE-IGLLSRAG--VKVS 313 (478)
Q Consensus 251 v~~H~~~~~~~~~~~~------~~~~~~~-~~------~-~~l~~~~~~~~~~~i~h~~~~~~~~-~~~~~~~~--~~~~ 313 (478)
+++|+.+......... ....... .. + ..+......+.+..+.|.......+ ++.+++.| +.+.
T Consensus 175 v~iH~ee~~~~~~~~~~~g~~~~~~~~~~~p~~~E~~~i~~~~~la~~~g~~~hi~H~s~~~~~~~i~~a~~~g~~v~~e 254 (423)
T PRK09357 175 IAQHCEDPSLTEGGVMNEGEVSARLGLPGIPAVAEEVMIARDVLLAEATGARVHICHVSTAGSVELIRWAKALGIKVTAE 254 (423)
T ss_pred EEEeCCCHHHhhcccccCChhhHHhCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEEeCCCHHHHHHHHHHHHcCCCEEEE
Confidence 9999987544321110 0011100 00 1 1222223334566777777644333 34444455 4556
Q ss_pred ECccchhh-----------c---------cCCCcHHHHHHCCCcEEEcCCCCCCCCCcC---HH--------HHHHHHHH
Q 011766 314 HCPASAMR-----------M---------LGFAPIKEMLHADICVSLGTDGAPSNNRMS---IV--------DEMYLASL 362 (478)
Q Consensus 314 ~~p~~~~~-----------~---------~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~---~~--------~~~~~~~~ 362 (478)
+||.+... . ....++.+++++|+.+++|||++++..... ++ -++....+
T Consensus 255 ~~ph~L~~~~~~~~~~~~~~k~~Pplr~~~~~~~l~~~l~~G~~~~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~~~~~ 334 (423)
T PRK09357 255 VTPHHLLLTDEDLLTYDPNYKVNPPLRTEEDREALIEGLKDGTIDAIATDHAPHAREEKECEFEAAPFGITGLETALSLL 334 (423)
T ss_pred echHHheEcHHHHhCcCCceEECCCCCCHHHHHHHHHHHHcCCCeEEecCCCCCChHHccCCHhhCCCCceEHHHHHHHH
Confidence 88854210 0 123456788999999999999987643211 11 11122221
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhh---hhhhccC
Q 011766 363 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRIT---SLVYCMR 439 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~---~~~~~~~ 439 (478)
.... .....++++++++++|.|||+++|+.+ |+|++|++|||+|+|.+..+..+.++..+ ...+...
T Consensus 335 ~~~~--------~~~~~~~~~~~~~~~t~~~A~~~g~~~--G~i~~G~~AD~~i~d~~~~~~v~~~~~~~~~~~~p~~g~ 404 (423)
T PRK09357 335 YTTL--------VKTGLLDLEQLLEKMTINPARILGLPA--GPLAEGEPADLVIFDPEAEWTVDGEDFASKGKNTPFIGM 404 (423)
T ss_pred HHHH--------HHcCCCCHHHHHHHHhHHHHHHhCCCC--CccCCCCcCCEEEEcCCCCEEEchhhcccCCCCCCCcCC
Confidence 1110 012369999999999999999999954 99999999999999988543222221111 1111111
Q ss_pred --CCCeeEEEEccEEEEEC
Q 011766 440 --TENVVSVMCNGQWVMKN 456 (478)
Q Consensus 440 --~~~v~~v~v~G~~v~~~ 456 (478)
..+|..||++|++||++
T Consensus 405 ~~~g~v~~t~v~G~~v~~~ 423 (423)
T PRK09357 405 KLKGKVVYTIVDGKIVYQD 423 (423)
T ss_pred EEeeEEEEEEECCEEEecC
Confidence 35799999999999975
No 55
>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=100.00 E-value=6.4e-32 Score=258.57 Aligned_cols=300 Identities=19% Similarity=0.146 Sum_probs=197.5
Q ss_pred eEEeCCCCEEeecccccccccchhhhccccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc
Q 011766 69 QIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ 148 (478)
Q Consensus 69 ~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~ 148 (478)
++||++|++|+|||||+|+|+..... ....| ....++..........+.++.+||||++++++.
T Consensus 2 ~vID~~g~~v~PGliD~H~Hl~~~~~-------~~~~~---------~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~g~~ 65 (342)
T cd01299 2 QVIDLGGKTLMPGLIDAHTHLGSDPG-------DLPLD---------LALPVEYRTIRATRQARAALRAGFTTVRDAGGA 65 (342)
T ss_pred cEEeCCCCEECCCeeeeeeeccccCC-------Ccccc---------ccCCHHHHHHHHHHHHHHHHhCCCcEEEeCCCc
Confidence 68999999999999999999844210 00000 001222333344457788999999999999865
Q ss_pred CHHHHHHHHHH----hCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEE
Q 011766 149 HVSEMAKAVEL----LGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWF 224 (478)
Q Consensus 149 ~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (478)
.... .+.... .|.+.+.....+....+.... ..........+ ....-...++.++.++++...+.+.+|++.
T Consensus 66 ~~~~-~~~~~~~g~~~gPr~~~~G~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~G~~~iK~~~ 141 (342)
T cd01299 66 DYGL-LRDAIDAGLIPGPRVFASGRALSQTGGHGDP-RGLSGLFPAGG--LAAVVDGVEEVRAAVREQLRRGADQIKIMA 141 (342)
T ss_pred chHH-HHHHHHcCCccCCceeecchhhcccCCCCcc-ccccccccccC--CcceecCHHHHHHHHHHHHHhCCCEEEEec
Confidence 4333 232233 355555554444321111110 00000000000 000001122566777777778888898876
Q ss_pred eccc--------cccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeecc
Q 011766 225 GIRQ--------IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW 296 (478)
Q Consensus 225 ~~~~--------~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~ 296 (478)
.... ....+++.+.++++.|++.|+++.+|+.+...... .+ ..+ ...+.|+..
T Consensus 142 ~g~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~~--------------~l-~~G----~~~i~H~~~ 202 (342)
T cd01299 142 TGGVLSPGDPPPDTQFSEEELRAIVDEAHKAGLYVAAHAYGAEAIRR--------------AI-RAG----VDTIEHGFL 202 (342)
T ss_pred cCCcCCCCCCCcccCcCHHHHHHHHHHHHHcCCEEEEEeCCHHHHHH--------------HH-HcC----CCEEeecCC
Confidence 4321 12468899999999999999999999986432111 11 112 235899999
Q ss_pred CChhHHHHHHhcCCeEEECccchhh----------------------ccCCCcHHHHHHCCCcEEEcCCCCC-CCCCcCH
Q 011766 297 VNHTEIGLLSRAGVKVSHCPASAMR----------------------MLGFAPIKEMLHADICVSLGTDGAP-SNNRMSI 353 (478)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~p~~~~~----------------------~~~~~~~~~~~~~gv~v~~gsD~~~-~~~~~~~ 353 (478)
+++++++++++.|+.++.||..+.. .....+++.+.++|+++++|||.+. .....++
T Consensus 203 ~~~~~~~~l~~~g~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~GTD~~~~~~~~~~~ 282 (342)
T cd01299 203 IDDETIELMKEKGIFLVPTLATYEALAAEGAAPGLPADSAEKVALVLEAGRDALRRAHKAGVKIAFGTDAGFPVPPHGWN 282 (342)
T ss_pred CCHHHHHHHHHCCcEEeCcHHHHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCchhHH
Confidence 9999999999999999999886432 1234678899999999999999864 2122345
Q ss_pred HHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCC
Q 011766 354 VDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSW 422 (478)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~ 422 (478)
+.++..... .++|++++|+++|.+||+++|+++++|+|++||.|||+|+|.|++
T Consensus 283 ~~e~~~~~~---------------~~~~~~~al~~~T~~~a~~~g~~~~~G~i~~G~~ADlvvl~~~pl 336 (342)
T cd01299 283 ARELELLVK---------------AGGTPAEALRAATANAAELLGLSDELGVIEAGKLADLLVVDGDPL 336 (342)
T ss_pred HHHHHHHHH---------------hCCCHHHHHHHHHHHHHHHhCccCCcceECCCCcCCEEEECCChh
Confidence 555543321 258999999999999999999988899999999999999999844
No 56
>PRK09237 dihydroorotase; Provisional
Probab=100.00 E-value=6.7e-31 Score=254.07 Aligned_cols=355 Identities=17% Similarity=0.160 Sum_probs=216.1
Q ss_pred eEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCC
Q 011766 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (478)
Q Consensus 21 ~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~ 100 (478)
++|+|++|+++.. ......+|+|++|||++|++..+. ..+.++||++|++|+|||||+|+|+....
T Consensus 1 ~~i~~~~v~d~~~--~~~~~~~v~i~~g~I~~v~~~~~~-----~~~~~~iD~~g~~v~PG~iD~H~H~~~~~------- 66 (380)
T PRK09237 1 LLLRGGRVIDPAN--GIDGVIDIAIEDGKIAAVAGDIDG-----SQAKKVIDLSGLYVSPGWIDLHVHVYPGS------- 66 (380)
T ss_pred CEEEeEEEECCCC--CcccceEEEEECCEEEEecCCCCC-----CCCCeEEECCCCEEecCEEEeeecCCCCC-------
Confidence 4799999996543 334567999999999999875331 12558999999999999999999984210
Q ss_pred CCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc---CHHHHHHHHHHh-CCeEEEecccccCCCC
Q 011766 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAVELL-GLRACLVQSTMDCGEG 176 (478)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~---~~~~~~~~~~~~-g~~~~~~~~~~~~~~~ 176 (478)
..... ...+.++.+||||+++++.. ....+.+..... +.+......+...+..
T Consensus 67 --------------~~~~~---------~~~~~~~~~G~Ttv~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~ 123 (380)
T PRK09237 67 --------------TPYGD---------EPDEVGVRSGVTTVVDAGSAGADNFDDFRKLTIEASKTRVLAFLNISRIGLL 123 (380)
T ss_pred --------------CccCC---------CHHHHHHhCCcCEEEECCCCCCCCHHHHHHHHHhhhCcEEEEEEeeeccccc
Confidence 00000 11234789999999996532 334444444443 5543322111111111
Q ss_pred CCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEecc
Q 011766 177 LPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 256 (478)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~ 256 (478)
.+. +...... +......+.+.++... ...++.............+.+.....++++.|+++.+|+.
T Consensus 124 ~~~-~~~~~~~------------~~~~~~~~~~~~~~~~-v~glk~~~~~~v~~~~~~~~~~~~~~~a~~~g~~v~~H~~ 189 (380)
T PRK09237 124 AQD-ELADLED------------IDADAVAEAVKRNPDF-IVGIKARMSSSVVGDNGIEPLELAKAIAAEANLPLMVHIG 189 (380)
T ss_pred ccc-hhcCHhH------------CCHHHHHHHHHhCcCc-EEEEEEEEecccccccCCchHHHHHHHHHhcCCCEEEEcC
Confidence 110 0000000 1112444445443321 1123322222111111113444555566689999999996
Q ss_pred CChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCCh-----------hHHHHHHhcCCeEEECccchhhccCC
Q 011766 257 EIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-----------TEIGLLSRAGVKVSHCPASAMRMLGF 325 (478)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~-----------~~~~~~~~~~~~~~~~p~~~~~~~~~ 325 (478)
+.......+. . .+.....+.||...++ +....+.+.|..+.+...... ...
T Consensus 190 ~~~~~~~~l~-------------~---~l~~g~~~~H~~~~~~~~~~~~~~~~~~~a~~~l~~G~~~~ig~g~~~--~~~ 251 (380)
T PRK09237 190 NPPPSLEEIL-------------E---LLRPGDILTHCFNGKPNRILDEDGELRPSVLEALERGVRLDVGHGTAS--FSF 251 (380)
T ss_pred CCCCCHHHHH-------------h---hccCCCEEEecCCCCCCCccCCCCcchHHHHHHHHCCEEEEecCCCCc--ccH
Confidence 6543222211 1 1122235788887765 567777888888876532210 123
Q ss_pred CcHHHHHHCCC-cEEEcCCCCCCC-CCc---CHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 011766 326 APIKEMLHADI-CVSLGTDGAPSN-NRM---SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 400 (478)
Q Consensus 326 ~~~~~~~~~gv-~v~~gsD~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~ 400 (478)
.+...++++|+ +.+++||..+.. ... .+...+.... +.+++++++++++|.|||+++|+
T Consensus 252 ~~~~~l~~~g~~~~~l~tD~~~~~~~~~~~~~l~~~~~~~~---------------~~g~~~~~al~~aT~n~A~~lgl- 315 (380)
T PRK09237 252 KVAEAAIAAGILPDTISTDIYCRNRINGPVYSLATVMSKFL---------------ALGMPLEEVIAAVTKNAADALRL- 315 (380)
T ss_pred HHHHHHHHCCCCceEEECCCCCCCcccchHhHHHHHHHHHH---------------HhCCCHHHHHHHHHHHHHHHcCC-
Confidence 45567788885 679999975532 111 1222222211 12699999999999999999999
Q ss_pred CCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeec
Q 011766 401 NDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILL 461 (478)
Q Consensus 401 ~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~ 461 (478)
+++|+|++|+.|||++++.+... .+..|+...+++..+...+..||++|+++|.+.....
T Consensus 316 ~~~G~l~~G~~ADlvv~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~v~G~~~~~~~~~~~ 375 (380)
T PRK09237 316 PELGRLQVGSDADLTLFTLKDGP-FTLTDSEGDSLIGERLLTPLATVRGGKVVLTEQGSAE 375 (380)
T ss_pred CCCCcCCCCCcCCEEEEeCCCCC-ccccCCCCCEEEecCCCcceEEEECCEEEEccCcccc
Confidence 56899999999999999976444 3567888888787788899999999999998765543
No 57
>TIGR03178 allantoinase allantoinase. This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases.
Probab=100.00 E-value=9.4e-32 Score=264.71 Aligned_cols=371 Identities=18% Similarity=0.194 Sum_probs=214.5
Q ss_pred eeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccC
Q 011766 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (478)
Q Consensus 20 ~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~ 99 (478)
|++|+|++|+++++ ...++|+|+||+|++|++... ..+.++||++|++|+|||||+|+|+....
T Consensus 1 dl~i~~~~v~~~~~----~~~~~v~i~dg~I~~i~~~~~------~~~~~~id~~g~~v~PG~ID~H~H~~~~~------ 64 (443)
T TIGR03178 1 DLIIRGGRVILPNG----EREADVGVKGGKIAAIGPDIL------GPAAKIIDAGGLVVFPGVVDTHVHINEPG------ 64 (443)
T ss_pred CEEEECcEEECCCC----ceEEEEEEECCEEEEeeCCCC------CCCCeEEECCCCEEeccEeccccccCCCC------
Confidence 57899999997543 245799999999999987421 12568999999999999999999984210
Q ss_pred CCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCC-ccCH----H-HHHHHHHHhCCeEEEecccccC
Q 011766 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQHV----S-EMAKAVELLGLRACLVQSTMDC 173 (478)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~-~~~~----~-~~~~~~~~~g~~~~~~~~~~~~ 173 (478)
... +.......+.++++|||++++++ .... . ......+...-...+..... .
T Consensus 65 ------------------~~~---~~~~~~~~~~~~~gGvTtv~dmp~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~-~ 122 (443)
T TIGR03178 65 ------------------RTE---WEGFETGTRAAAAGGITTYIDMPLNSIPATTTRASLEAKFEAAKGKLAVDVGFW-G 122 (443)
T ss_pred ------------------ccc---cchHHHHHHHHHcCCeEEEEECCCCCCCCCCcHHHHHHHHHHhccCCceeEEEE-e
Confidence 000 01122344568999999999986 2211 1 11111221111111111110 0
Q ss_pred CCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEecccc---ccCCHHHHHHHHHHHHHcCCc
Q 011766 174 GEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQI---MNATDRLLLETRDMAREFKTG 250 (478)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~a~~~~~~ 250 (478)
+ . .. ...+.+..+...+...++++.++.+. ...+.+.+.++++.+++.|+.
T Consensus 123 ~--~--------~~----------------~~~~~i~~~~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~ 176 (443)
T TIGR03178 123 G--L--------VP----------------YNLDDLRELDEAGVVGFKAFLSPSGDDEFPHVDDWQLYKGMRELARLGQL 176 (443)
T ss_pred c--c--------CC----------------CCHHHHHHHHHCCCcEEEEEecccCCCCcccCCHHHHHHHHHHHHhcCCe
Confidence 0 0 00 11222344444444556665544322 356788899999999999999
Q ss_pred eeEeccCChhhhHHH---hhhcC-------CCCc--------hHHHHhhhCCCCCCeeeeeeccC-ChhHHHHHHhcCCe
Q 011766 251 IHMHVAEIPYENQVV---MDTRK-------VDHG--------TVTFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVK 311 (478)
Q Consensus 251 v~~H~~~~~~~~~~~---~~~~~-------~~~~--------~~~~l~~~~~~~~~~~i~h~~~~-~~~~~~~~~~~~~~ 311 (478)
+++|+... ...... ....+ ...+ ....+......+.+..+.|.+.. +-+.++.+++.|..
T Consensus 177 v~~H~E~~-~~~~~~~~~~~~~g~~~~~~~~~~~p~~ae~~~~~~~~~la~~~g~~vhi~Hiss~~~~~~i~~~~~~g~~ 255 (443)
T TIGR03178 177 LLVHAENP-AITSALGEEAPPQGGVGADAYLASRPVFAEVEAIRRTLALAKVTGCRVHVVHLSSAEAVELITEAKQEGLD 255 (443)
T ss_pred EEEeccCh-HHHHHHHHHHHhcCCCChhHhcCcCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCc
Confidence 99996443 221110 00000 0000 11122222333445555555542 12445555666644
Q ss_pred --EEECccchhh------c-----cCCCc---------HHHHHHCCCcEEEcCCCCCCCC----CcCHHH--------HH
Q 011766 312 --VSHCPASAMR------M-----LGFAP---------IKEMLHADICVSLGTDGAPSNN----RMSIVD--------EM 357 (478)
Q Consensus 312 --~~~~p~~~~~------~-----~~~~~---------~~~~~~~gv~v~~gsD~~~~~~----~~~~~~--------~~ 357 (478)
+.+||..... . ...+| +.+.++.|+..+++||+.|+.. ..+++. +.
T Consensus 256 it~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~i~SDh~p~~~~~K~~~~~~~~~~G~~g~e~ 335 (443)
T TIGR03178 256 VTVETCPHYLTLTAEEVPDGGTLAKCAPPIRDLANQEGLWEALLNGLIDCVVSDHSPCTPDLKRAGDFFKAWGGIAGLQS 335 (443)
T ss_pred EEEEECccceEecHHHhhCcCcceEEcCCCCChHHHHHHHHHHHcCCccEEeCCCCCCChHHcCcCChhhCCCCeeEHHH
Confidence 4567775310 0 11122 3355788999999999987631 112211 01
Q ss_pred HHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCC-CCCCCCc-------CC
Q 011766 358 YLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF-SWPMVPV-------HD 429 (478)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~-~~~~~~~-------~d 429 (478)
.+..+... ...+.++|++++++++|.|||+++|+ +++|+|++|+.|||||+|.+ ++...+. .+
T Consensus 336 ~l~~~~~~--------~~~~~~l~~~~~~~~~t~~pA~~~g~-~~~G~l~~G~~Ad~vi~d~~~~~~~~~~~~~~~~~~~ 406 (443)
T TIGR03178 336 TLDVMFDE--------AVQKRGLPLEDIARLMATNPAKRFGL-AQKGRIAPGKDADFVFVDPDESYTLTPDDLYYRHKVS 406 (443)
T ss_pred hHHHHHHH--------HHHhcCCCHHHHHHHHhHHHHHHcCC-CCCCccCCCCcCCEEEEcCCCcEEEcHHHhhhcCCCC
Confidence 11111100 00123599999999999999999999 55799999999999999996 3322211 22
Q ss_pred hhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHH
Q 011766 430 RITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRL 467 (478)
Q Consensus 430 ~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~ 467 (478)
|+..... ..+|.+||++|++||++|++++...|++
T Consensus 407 p~~g~~~---~g~v~~t~v~G~~v~~~g~~~~~~~g~~ 441 (443)
T TIGR03178 407 PYVGRTI---GGRVRATYLRGQCIYDDEQFIGAPKGQL 441 (443)
T ss_pred CcCCcEE---eeEEEEEEECCEEEEECCeeccCCCCcc
Confidence 3332211 3579999999999999999876555554
No 58
>TIGR01792 urease_alph urease, alpha subunit. This model describes the urease alpha subunit UreC (designated beta or B chain, UreB in Helicobacter species). Accessory proteins for incorporation of the nickel cofactor are usually found in addition to the urease alpha, beta, and gamma subunits. The trusted cutoff is set above the scores of many reported fragments and of a putative second urease alpha chain in Streptomyces coelicolor.
Probab=100.00 E-value=9e-31 Score=254.21 Aligned_cols=337 Identities=17% Similarity=0.160 Sum_probs=199.1
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhh--hhh---ccCCCeEEeCCCCEEeecccccccccch
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL--QQF---SQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~--~~~---~~~~~~viD~~G~~v~PGfID~H~H~~~ 91 (478)
..++++|+|++|++. . . +.+++|+|+||||++|++..... ..+ ...++++||++|++|+|||||+|+|+..
T Consensus 64 ~~MDlVIkNg~VID~--~-g-i~kaDI~IkDGrIaaIG~~~~p~~~~~v~~~~~~~tEVIDa~GkIV~PGlIDtHvH~~~ 139 (567)
T TIGR01792 64 GVLDLVITNALILDW--T-G-IYKADIGIKNGRIVGIGKAGNPDTMDGVDMIVGASTEAISGEGKIVTAGGIDTHVHYIS 139 (567)
T ss_pred ccCcEEEECeEEECC--C-C-eEEEEEEEECCEEEEEcCCCcccccccccccCCCCCeEEECCCCEEEECeEEeecCCCC
Confidence 467899999999963 2 2 46789999999999999753210 000 0135689999999999999999999821
Q ss_pred hhhccccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC---------------HHHHHHH
Q 011766 92 QLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---------------VSEMAKA 156 (478)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~---------------~~~~~~~ 156 (478)
+. ..+.++..|||++++.|... ...+.+.
T Consensus 140 ----------------------------P~--------~~~aAl~gGVTTmI~~Gtgp~~~t~pTt~t~~~~~~~~~l~a 183 (567)
T TIGR01792 140 ----------------------------PQ--------QVQAALDNGITTLIGGGTGPADGTNATTCTPGPWYLHRMLQA 183 (567)
T ss_pred ----------------------------cc--------HHHHHHhCceEEEecCCCccccCCCCcccccchhhHHHHHHH
Confidence 11 13457899999999954310 1112233
Q ss_pred HHHhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHH
Q 011766 157 VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRL 236 (478)
Q Consensus 157 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (478)
....+++... +..+ . . ...+.+.+....+. + .+.++..+..+++.
T Consensus 184 a~~~~in~g~----~g~g--~---------~----------------~~~~~L~e~i~aGa--~--gfK~h~~y~~s~e~ 228 (567)
T TIGR01792 184 ADGLPINFGF----TGKG--S---------G----------------SGPAALIEQIEAGA--C--GLKVHEDWGATPAA 228 (567)
T ss_pred hccCCccEEE----EeCC--c---------c----------------chHHHHHHHHHcCC--c--EEEeCCCCCCCHHH
Confidence 3333333211 0000 0 0 01111222222222 2 25667778899999
Q ss_pred HHHHHHHHHHcCCceeEeccCChhh---hHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCC---
Q 011766 237 LLETRDMAREFKTGIHMHVAEIPYE---NQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGV--- 310 (478)
Q Consensus 237 l~~~~~~a~~~~~~v~~H~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~--- 310 (478)
+.++++.|+++++++++|+ +...+ .+...... +.++++.++..+.-.. | .|+.++.+...++
T Consensus 229 L~~al~~A~e~gv~V~iH~-ET~~E~g~ve~t~~a~--g~rpIh~~H~~G~g~g-----h----apdi~~~~~~~~~~~~ 296 (567)
T TIGR01792 229 IDNALSVADEYDVQVAVHT-DTLNESGFVEDTIAAF--KGRTIHTYHTEGAGGG-----H----APDIIVVVGYNNILPS 296 (567)
T ss_pred HHHHHHHHHHcCCEEEEeC-CCcccchHHHHHHHHH--CCCcchhHhhcCCCCC-----c----HHHHHHHcCCCCcccC
Confidence 9999999999999999999 66655 33333322 2345555555443221 1 1222222222221
Q ss_pred ------------------eEEECccchh-------------hccCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHH-HH
Q 011766 311 ------------------KVSHCPASAM-------------RMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDE-MY 358 (478)
Q Consensus 311 ------------------~~~~~p~~~~-------------~~~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~-~~ 358 (478)
.+.+|...+. |...+..-..|.+.|+..+++||+.+.+.-...... .+
T Consensus 297 st~pt~p~~~~~~~e~~~m~~~~h~l~~~~~~d~~~a~~r~r~~t~~ae~~l~d~G~~~~~~sDs~~mgr~~~~~~r~~q 376 (567)
T TIGR01792 297 STNPTLPYTVNTIDEHLDMLMVCHHLNPKIPEDVAFAESRIRKETIAAEDVLQDMGAISMISSDSQAMGRIGEVVTRCWQ 376 (567)
T ss_pred CCCCCCCCccCchhhhcCeEEEeccCCCCCcccchhhhhhccceeccccchhhhCCcEEEecCCchhhCcccceeechHH
Confidence 2222222111 112233334678899999999998643221111111 11
Q ss_pred HHHHHhcccccc--cCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhh
Q 011766 359 LASLINKGREVF--ANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVY 436 (478)
Q Consensus 359 ~~~~~~~~~~~~--~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~ 436 (478)
.+......+... ...+...+.++++ |+++|.|||+++|+++++|+|++||.||||||+.+++.
T Consensus 377 ~a~k~~~~~g~~~~~~~~~~~~rl~r~--L~~yT~n~A~a~g~~~~~GsLe~Gk~ADlVv~~~d~f~------------- 441 (567)
T TIGR01792 377 TADKMKKQRGPLPGDSPGNDNNRVKRY--VAKYTINPAITHGISDYIGSIEVGKLADLVLWEPAFFG------------- 441 (567)
T ss_pred HHHHHHHhcCCCcccccCChhhhHHHH--HHHHhHHHHHHcCcccCceeeCCCCccCEEEEcCcccC-------------
Confidence 222222111111 1111122334444 99999999999999999999999999999999998543
Q ss_pred ccCCCCeeEEEEccEEEEEC-Cee
Q 011766 437 CMRTENVVSVMCNGQWVMKN-KKI 459 (478)
Q Consensus 437 ~~~~~~v~~v~v~G~~v~~~-g~~ 459 (478)
..+..||++|+++|.. |..
T Consensus 442 ----~~p~~v~~~G~i~~~~~Gd~ 461 (567)
T TIGR01792 442 ----VKPDMVLKGGLIAWAIMGDP 461 (567)
T ss_pred ----CChheEEECCEEEEEeCCCc
Confidence 3577999999999876 543
No 59
>PRK13207 ureC urease subunit alpha; Reviewed
Probab=100.00 E-value=3.3e-30 Score=249.88 Aligned_cols=333 Identities=18% Similarity=0.179 Sum_probs=204.4
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhh-----hhccCCCeEEeCCCCEEeecccccccccch
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-----QFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~-----~~~~~~~~viD~~G~~v~PGfID~H~H~~~ 91 (478)
..++++|+|++|+++ . . +..++|+|+||||++|++...... .....+.++||++|++|+|||||+|+|+..
T Consensus 65 ~~mDlVI~Na~Vvd~--~-g-i~~adI~I~dGrI~~IG~~~~p~~~~~v~~~~~~~~eVIDa~G~iV~PG~ID~HvH~~~ 140 (568)
T PRK13207 65 GAVDTVITNALILDH--W-G-IVKADIGIKDGRIVAIGKAGNPDIQDGVDIIIGPGTEVIAGEGLIVTAGGIDTHIHFIC 140 (568)
T ss_pred ccCCEEEECeEEECC--C-C-eEEEEEEEECCEEEEEeCCCCccccccccccCCCCCeEEECCCCEEEeCeEECccCCcc
Confidence 457899999999964 2 2 356899999999999997421100 001135689999999999999999999821
Q ss_pred hhhccccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC-----H-------HHHHHHH--
Q 011766 92 QLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----V-------SEMAKAV-- 157 (478)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~-----~-------~~~~~~~-- 157 (478)
+.. .+.++.+||||+++++... . .......
T Consensus 141 ----------------------------P~~--------~~aALagGVTTVi~mg~gP~~gt~~~t~tpG~~~l~~~l~~ 184 (568)
T PRK13207 141 ----------------------------PQQ--------IEEALASGVTTMIGGGTGPATGTNATTCTPGPWHIHRMLQA 184 (568)
T ss_pred ----------------------------ccH--------HHHHHcCCCCEEEcCCcCCccCCcccccccchHHHHHHHHH
Confidence 000 2457999999999974211 0 1111111
Q ss_pred -HHhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHH
Q 011766 158 -ELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRL 236 (478)
Q Consensus 158 -~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (478)
+...+... ....+ .. ...+.+++....+...+++. ..+..+++.
T Consensus 185 a~~~pin~g----~~g~g-----------~~----------------~~~~~L~e~i~aGA~gfKi~----~d~g~t~~~ 229 (568)
T PRK13207 185 ADAFPMNIG----FLGKG-----------NA----------------SLPEALEEQIEAGAIGLKLH----EDWGATPAA 229 (568)
T ss_pred hhcCCceEE----EEcCC-----------Cc----------------ccHHHHHHHHHcCCCEEeec----CCCCCCHHH
Confidence 11111000 00000 00 11222333334444445432 223457889
Q ss_pred HHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeecc-------CChhHHHHHHhcC
Q 011766 237 LLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW-------VNHTEIGLLSRAG 309 (478)
Q Consensus 237 l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~-------~~~~~~~~~~~~~ 309 (478)
+.++++.|+++|+++.+|+....... +.+. .......+ ..|..| -.++.++.+...+
T Consensus 230 l~~aL~~A~~~gv~V~iHa~tlne~G------------~~e~--t~~a~~g~--~iH~~H~egaggghapdii~~~~~~~ 293 (568)
T PRK13207 230 IDNCLSVADEYDVQVAIHTDTLNESG------------FVED--TIAAFKGR--TIHTFHTEGAGGGHAPDIIKVAGEPN 293 (568)
T ss_pred HHHHHHHHHHhCCEEEEeCCCcccch------------HHHH--HHHhcCCC--EEEEEeecCCCcCCchHHHHHhhcCC
Confidence 99999999999999999996432210 1111 01111111 234443 3467777777777
Q ss_pred CeEE-ECccchh---------------------------------hccCCCcHHHHHHCCCcEEEcCCCCCCC-CCcCHH
Q 011766 310 VKVS-HCPASAM---------------------------------RMLGFAPIKEMLHADICVSLGTDGAPSN-NRMSIV 354 (478)
Q Consensus 310 ~~~~-~~p~~~~---------------------------------~~~~~~~~~~~~~~gv~v~~gsD~~~~~-~~~~~~ 354 (478)
+--+ +.|+.-+ |...+..=.-+++.|+.++++||++..+ -..+++
T Consensus 294 v~p~st~pt~p~~~~~~~e~~~m~m~~h~l~~~~~~d~~~a~srir~~t~~ae~~l~d~Ga~~~~~SD~p~~~~~~~~~~ 373 (568)
T PRK13207 294 VLPSSTNPTRPYTVNTIDEHLDMLMVCHHLDPSIPEDVAFAESRIRRETIAAEDILHDLGAISMISSDSQAMGRVGEVII 373 (568)
T ss_pred CccCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhhhhhccceeecccchhhhCCCEEEecCCcccccccccchh
Confidence 6433 3333110 0011222236789999999999997652 125677
Q ss_pred HHHHHHHHHhcccccc--cCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhh
Q 011766 355 DEMYLASLINKGREVF--ANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRIT 432 (478)
Q Consensus 355 ~~~~~~~~~~~~~~~~--~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~ 432 (478)
..++.+......+... ..++.+.+.+++. |+++|.|||+++|+++.+|+|++||.||||+|+.+.+.
T Consensus 374 r~~q~A~~r~~~~G~~~~d~~~~~n~ri~~~--l~~~T~npA~alG~~~~vGsIe~Gk~ADlVvld~d~f~--------- 442 (568)
T PRK13207 374 RTWQTAHKMKVQRGPLPGDSGRNDNFRVKRY--IAKYTINPAIAHGISHEVGSVEVGKLADLVLWKPAFFG--------- 442 (568)
T ss_pred HHHHHHHHHHHccCCCCcccccCccchHHHH--HHHHhHHHHHHcCCCcCccccCCCCcCCEEEECchhcC---------
Confidence 8788777665332221 1122233334444 99999999999999988999999999999999997432
Q ss_pred hhhhccCCCCeeEEEEccEEEEEC-Cee
Q 011766 433 SLVYCMRTENVVSVMCNGQWVMKN-KKI 459 (478)
Q Consensus 433 ~~~~~~~~~~v~~v~v~G~~v~~~-g~~ 459 (478)
.++..||++|+++|.. |..
T Consensus 443 --------~~~~~ti~~G~iv~~~~gd~ 462 (568)
T PRK13207 443 --------VKPELVLKGGMIAWAPMGDP 462 (568)
T ss_pred --------CCceEEEECCEEEEecCCCc
Confidence 4688999999999987 554
No 60
>PRK09061 D-glutamate deacylase; Validated
Probab=99.98 E-value=3.5e-30 Score=255.25 Aligned_cols=373 Identities=19% Similarity=0.170 Sum_probs=218.5
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~ 96 (478)
.+++++|+|++|+++++ .....++|+|+||+|++|++... .+.++||++|++|+|||||+|+|....
T Consensus 17 ~~~~~li~~~~vid~~~--~~~~~~~v~I~~G~I~~ig~~~~-------~~~~viD~~g~~v~PG~ID~H~H~~~~---- 83 (509)
T PRK09061 17 APYDLVIRNGRVVDPET--GLDAVRDVGIKGGKIAAVGTAAI-------EGDRTIDATGLVVAPGFIDLHAHGQSV---- 83 (509)
T ss_pred ccCCEEEECcEEEeCCC--CeeccceEEEECCEEEEecCCCC-------CCCeEEeCCCCEEecCeEeeeeCCCCC----
Confidence 45789999999997543 33355799999999999987421 245899999999999999999997210
Q ss_pred ccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCC-ccC-HHHHHHHHHHhCCeEEEec-cccc-
Q 011766 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQH-VSEMAKAVELLGLRACLVQ-STMD- 172 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~-~~~-~~~~~~~~~~~g~~~~~~~-~~~~- 172 (478)
. ....++..||||++++. +.. .....+.....+....++. ....
T Consensus 84 ------------------------~--------~~~~~~~~GvTtvv~~~~~~~p~~~~~~~~~~~~~~vn~~~~~~~~~ 131 (509)
T PRK09061 84 ------------------------A--------AYRMQAFDGVTTALELEAGVLPVARWYAEQAGEGRPLNYGASVGWTP 131 (509)
T ss_pred ------------------------c--------cchhhccCCceeEEeeccCCCCHHHHHHHHHhcCCcceeehhcCcHH
Confidence 0 01235778999999872 322 2233333333332211111 0000
Q ss_pred ------CCCCCCCc------------ccc-cCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCC
Q 011766 173 ------CGEGLPAS------------WAV-RTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNAT 233 (478)
Q Consensus 173 ------~~~~~~~~------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (478)
.+...... +.. ..+...+. +..+++++..+.+...++. +....+..+
T Consensus 132 ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~------------~m~~ll~~al~~Ga~gis~--~~~y~p~~~ 197 (509)
T PRK09061 132 ARIAVLTGPQAEGTIADFGKALGDPRWQERAATPAELA------------EILELLEQGLDEGALGIGI--GAGYAPGTG 197 (509)
T ss_pred HHHHHhCCcccccccccccccccccccccCCCCHHHHH------------HHHHHHHHHHHCCCCEEec--CCccCCCCC
Confidence 00000000 000 00001011 2344444433444444432 223334568
Q ss_pred HHHHHHHHHHHHHcCCceeEeccCChhh--hHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCCh-------hHHHH
Q 011766 234 DRLLLETRDMAREFKTGIHMHVAEIPYE--NQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-------TEIGL 304 (478)
Q Consensus 234 ~~~l~~~~~~a~~~~~~v~~H~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~-------~~~~~ 304 (478)
.+.+.++++.++++|.++.+|+.+.... ..... ...+.+......+.+..+.|...... +.+++
T Consensus 198 ~~eL~~l~~~A~~~g~~v~~H~e~~~~~~~~~e~~-------av~~~i~lA~~~G~rv~IsHlss~g~~~~~~~le~I~~ 270 (509)
T PRK09061 198 HKEYLELARLAARAGVPTYTHVRYLSNVDPRSSVD-------AYQELIAAAAETGAHMHICHVNSTSLRDIDRCLALVEK 270 (509)
T ss_pred HHHHHHHHHHHHHcCCEEEEEecCcccCCchhHHH-------HHHHHHHHHHHhCCCEEEEeeccCCcccHHHHHHHHHH
Confidence 8899999999999999999999765320 00000 01234444445556788889887542 44666
Q ss_pred HHhcCCeE--EECccc-----------h--hhc----------c---C--------------------------------
Q 011766 305 LSRAGVKV--SHCPAS-----------A--MRM----------L---G-------------------------------- 324 (478)
Q Consensus 305 ~~~~~~~~--~~~p~~-----------~--~~~----------~---~-------------------------------- 324 (478)
+++.|+.+ .+||+. + ... . +
T Consensus 271 Ar~~Gi~Vt~e~~P~~~~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (509)
T PRK09061 271 AQAQGLDVTTEAYPYGAGSTVVGAAFFDPGWLERMGLGYGSLQWVETGERLLTREELAKLRANDPGGLVLIHFLDEDNPR 350 (509)
T ss_pred HHHcCCcEEEEecCcchhhhhhcccccCHHHHHHhCCCHHHheehhcccccCCHHHHHHHhccCCCCeEEEEeccCCCCc
Confidence 67777654 677776 1 000 0 0
Q ss_pred -CCcHHHHHHCCCcEEEcCCCCCCCCCc-------------CHHHHHHH----HHHHhcccccccCCCCCCCCCCHHHHH
Q 011766 325 -FAPIKEMLHADICVSLGTDGAPSNNRM-------------SIVDEMYL----ASLINKGREVFANGTTDPAALPAETVL 386 (478)
Q Consensus 325 -~~~~~~~~~~gv~v~~gsD~~~~~~~~-------------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ls~~~al 386 (478)
...+...+..+. ++++||+.+..... ....+++. ...+... ......+|+++++
T Consensus 351 ~~~~l~~~l~~p~-~~i~sD~~p~~~~~~~~~~~~~~~~~~~~~~h~r~~~~~~~~l~~~-------v~~~~~isl~~ai 422 (509)
T PRK09061 351 DRALLDRSVLFPG-AAIASDAMPWTWSDGTVYEGDAWPLPEDAVSHPRSAGTFARFLREY-------VRERKALSLLEAI 422 (509)
T ss_pred cchhHHHHhCCCC-ceEecCCccccccccccccccccccccCCCCCchhhcchHHHHHHH-------HhhcccCCHHHHH
Confidence 111333444453 49999985431000 00100000 1111000 0112359999999
Q ss_pred HHHhHHHHHHcC-----CCCCccccccCccccEEEEcCCCCCCC-CcCChhhhhhhccCCCCeeEEEEccEEEEECCeee
Q 011766 387 RMATINGAKSVL-----WDNDIGSLEAGKKADMVVVDPFSWPMV-PVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKIL 460 (478)
Q Consensus 387 ~~~T~~pA~~lg-----l~~~~G~l~~G~~ADlvv~d~~~~~~~-~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~ 460 (478)
+++|.+||++|| +.+ .|+|++|+.|||+|||++.+... ...++. .....|.+||+||+++|++|+++
T Consensus 423 ~~~T~~pA~~lg~~~~~l~~-~G~i~~G~~ADlvv~D~~~~~~~~~~~~~~------~~~~gi~~v~v~G~~v~~~g~~~ 495 (509)
T PRK09061 423 RKCTLMPAQILEDSVPAMRR-KGRLQAGADADIVVFDPETITDRATFEDPN------RPSEGVRHVLVNGVPVVSNGELV 495 (509)
T ss_pred HHHHHHHHHHhccccccccC-CEeeCCCCCcCEEEEchhhccccccccccC------CCCCCceEEEECCEEEEECCEec
Confidence 999999999999 743 69999999999999998853322 122221 12246999999999999999985
Q ss_pred -cccHHHHHHH
Q 011766 461 -LLMRGRLFQL 470 (478)
Q Consensus 461 -~~~~~~~~~~ 470 (478)
+..+|+++|.
T Consensus 496 ~~~~~G~~lr~ 506 (509)
T PRK09061 496 RDARPGRPVRR 506 (509)
T ss_pred CCCCCCeEecC
Confidence 7889998864
No 61
>PRK13206 ureC urease subunit alpha; Reviewed
Probab=99.98 E-value=4.9e-30 Score=247.92 Aligned_cols=330 Identities=19% Similarity=0.188 Sum_probs=197.8
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhh-------hhccCCCeEEeCCCCEEeeccccccccc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-------QFSQMADQIIDLQSQILLPGFVNTHVHT 89 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~-------~~~~~~~~viD~~G~~v~PGfID~H~H~ 89 (478)
..++++|+|++|++.. . ...++|.|+||+|++|++...... .+...++++||++|++|+|||||+|+|+
T Consensus 69 ~~~DlVI~Na~IiD~~---g-i~~adI~IkDGrIvaIG~~~~p~~~~gv~~~~~ig~~tevIDaeG~iV~PG~ID~HVH~ 144 (573)
T PRK13206 69 GAPDTVITGAVILDHW---G-IVKADVGIRDGRIVAIGKAGNPDIMDGVHPDLVIGPSTEIIAGNGRILTAGAIDCHVHF 144 (573)
T ss_pred CCCCEEEECeEEECCC---C-eEEEEEEEECCEEEEEeCCCCccccccccccccCCCCCEEEECCCCEEEeCEEeeeecc
Confidence 4678999999999532 2 245799999999999997431100 0112356899999999999999999998
Q ss_pred chhhhccccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCH------------H---HHH
Q 011766 90 SQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV------------S---EMA 154 (478)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~------------~---~~~ 154 (478)
.. +. ..+.++++||||+++++.... . .+.
T Consensus 145 ~~----------------------------Pg--------~~~aALagGVTTvi~~G~gP~~~t~~~t~t~g~~~l~~~~ 188 (573)
T PRK13206 145 IC----------------------------PQ--------IVDEALAAGITTLIGGGTGPAEGSKATTVTPGAWHLARML 188 (573)
T ss_pred CC----------------------------ch--------HHHHHHcCCeEEEEcCCCCccccCcccccccchhHHHHHH
Confidence 21 00 014589999999998532210 0 111
Q ss_pred HHHHHhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCH
Q 011766 155 KAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATD 234 (478)
Q Consensus 155 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (478)
+..+...+... +. +.+ . . ...+.+.++...+...++. +..+..++
T Consensus 189 ~aa~~~pvn~g----~~--g~g---------~----~------------~~~~~L~el~~aGA~GfKi----~~d~g~t~ 233 (573)
T PRK13206 189 EALDGWPVNVA----LL--GKG---------N----T------------VSAEALWEQLRGGAGGFKL----HEDWGSTP 233 (573)
T ss_pred HHhhcCceeEE----Ee--cCc---------C----c------------CCHHHHHHHHHCCCcEEee----cCccCCCH
Confidence 11111111000 00 000 0 0 1112344444444444443 23345788
Q ss_pred HHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHH-HhhhCCCCCCeeeeeeccCC----hhHHHHHHhcC
Q 011766 235 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTF-LDKIEFLQNNLLSAHTVWVN----HTEIGLLSRAG 309 (478)
Q Consensus 235 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~i~h~~~~~----~~~~~~~~~~~ 309 (478)
+.+.++++.|+++++++.+|+...... ++.+. +.+ ..+....+.|..... ++.++.+...+
T Consensus 234 ~~i~~aL~~A~~~gv~V~iHadtlne~------------g~~E~t~aa--~~gr~iH~~H~egaggghapd~~~~~~~~n 299 (573)
T PRK13206 234 AAIDACLRVADAAGVQVALHSDTLNEA------------GFVEDTLAA--IAGRSIHAYHTEGAGGGHAPDIITVASHPN 299 (573)
T ss_pred HHHHHHHHHHHHhCCEEEEECCCcccc------------chhhHHHHH--hcCCeEEEEeccCCCcCcccHHHHhcCCCC
Confidence 999999999999999999999653321 12221 111 111222223322211 33333333333
Q ss_pred Ce-EEECcc--------------------ch-------------hhccCCCcHHHHHHCCCcEEEcCCCCCCCCC----c
Q 011766 310 VK-VSHCPA--------------------SA-------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNR----M 351 (478)
Q Consensus 310 ~~-~~~~p~--------------------~~-------------~~~~~~~~~~~~~~~gv~v~~gsD~~~~~~~----~ 351 (478)
+- -++.|+ .+ .|...+..=..|++.|+..+++||+++.+.- .
T Consensus 300 ~lp~stnpt~p~~~nt~~e~~~m~m~~h~l~~~~~~d~~fa~srir~~ti~ae~~l~d~G~~~~~~SDs~~~~~~~e~~~ 379 (573)
T PRK13206 300 VLPSSTNPTRPHTVNTLDEHLDMLMVCHHLNPAVPEDLAFAESRIRPSTIAAEDVLHDMGAISMIGSDSQAMGRIGEVVL 379 (573)
T ss_pred CcCCCCCCCCCCcccchhhhhCeEEeeccCCCCCcchhhhhhhhccceeeccCchHhhCCcEEeccCCccccccccchhh
Confidence 22 122222 11 0111222334788999999999999864322 2
Q ss_pred CHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChh
Q 011766 352 SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRI 431 (478)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~ 431 (478)
.+|+....+. .+.....++...+.++.+++|+++|.|||+++|+++.+|+|++||.||||+||.+.+.
T Consensus 380 ~~~q~a~~~~----~rr~~l~g~~~~~~~~v~~al~~yT~nPA~alG~~~~~GsLe~Gk~ADlVvld~d~f~-------- 447 (573)
T PRK13206 380 RTWQTAHVMK----RRRGALPGDGRADNNRARRYVAKYTICPAVAHGIDHEIGSVEVGKLADLVLWEPAFFG-------- 447 (573)
T ss_pred hHHHHHHHHH----hccCCCCCCCcccchhHHHHHHHHHHHHHHHhCCCcCCcccCCCCcCCEEEECccccC--------
Confidence 3444443322 1222233444467799999999999999999999888999999999999999997432
Q ss_pred hhhhhccCCCCeeEEEEccEEEEEC
Q 011766 432 TSLVYCMRTENVVSVMCNGQWVMKN 456 (478)
Q Consensus 432 ~~~~~~~~~~~v~~v~v~G~~v~~~ 456 (478)
.++..||++|+++|..
T Consensus 448 ---------~~~~~ti~~G~iv~~~ 463 (573)
T PRK13206 448 ---------VRPHAVLKGGAIAWAA 463 (573)
T ss_pred ---------CCccEEEECCEEEEec
Confidence 3678999999999986
No 62
>PRK07627 dihydroorotase; Provisional
Probab=99.98 E-value=4.3e-31 Score=256.44 Aligned_cols=359 Identities=15% Similarity=0.143 Sum_probs=204.8
Q ss_pred ceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcccc
Q 011766 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (478)
Q Consensus 19 ~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~ 98 (478)
|+++|+|++|+++.+ ....+++|+|+||||++|++... +..+.++||++|++|+|||||+|+|+....
T Consensus 1 m~~~i~~~~v~~~~~--~~~~~~~I~I~~g~I~~i~~~~~-----~~~~~~~iDa~g~~vlPG~iD~H~H~~~~g----- 68 (425)
T PRK07627 1 MKIHIKGGRLIDPAA--GTDRQADLYVAAGKIAAIGQAPA-----GFNADKTIDASGLIVCPGLVDLSARLREPG----- 68 (425)
T ss_pred CeEEEEeeEEECCCC--CccceeEEEEECCEEEEecCCCc-----CCCCCeEEECCCCEEeccEEeccccccCCC-----
Confidence 468999999996543 33456899999999999987421 113568999999999999999999993210
Q ss_pred CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCH----HHHHHHHH----H-hCCeEEEecc
Q 011766 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV----SEMAKAVE----L-LGLRACLVQS 169 (478)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~----~~~~~~~~----~-~g~~~~~~~~ 169 (478)
+... .......+.++.+||||++++..... ........ . .+...+....
T Consensus 69 -------------------~~~~---e~~~t~s~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (425)
T PRK07627 69 -------------------YEYK---ATLESEMAAAVAGGVTSLVCPPDTDPVLDEPGLVEMLKFRARNLNQAHVYPLGA 126 (425)
T ss_pred -------------------cccc---CcHHHHHHHHHhCCeeEEEeCCCCCCCCCCHHHHHHHHHHhhccCceeEEEeCe
Confidence 0000 11122345689999999998753211 11111111 1 1222211111
Q ss_pred cccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCC
Q 011766 170 TMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT 249 (478)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~ 249 (478)
.. .+ . .. .....+..+.+.+...++ ....+..+...+.+.++.+++.|.
T Consensus 127 ~~-~g--~--------~~----------------~~~~~i~~l~~~G~~~fk----~~~~~~~~~~~l~~~~~~~~~~~~ 175 (425)
T PRK07627 127 LT-VG--L--------KG----------------EVLTEMVELTEAGCVGFS----QANVPVVDTQVLLRALQYASTFGF 175 (425)
T ss_pred EE-cC--C--------Cc----------------cCHHHHHHHHhCCEEEEE----cCCcccCCHHHHHHHHHHHHhcCC
Confidence 10 00 0 00 111112222222211122 112223566778889999999999
Q ss_pred ceeEeccCChhhhHHH------hhhcCCCCc-------hH-HHHhhhCCCCCCeeeeeeccCC-hhHHHHHHhcC--CeE
Q 011766 250 GIHMHVAEIPYENQVV------MDTRKVDHG-------TV-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG--VKV 312 (478)
Q Consensus 250 ~v~~H~~~~~~~~~~~------~~~~~~~~~-------~~-~~l~~~~~~~~~~~i~h~~~~~-~~~~~~~~~~~--~~~ 312 (478)
++.+|+.+........ ......... .+ ..+......+.+..+.|.+.-. -+.+..+++.| +.+
T Consensus 176 ~v~~H~E~~~~~~~~~~~~g~~~~~~~~~~~P~~aE~~av~r~~~la~~~~~~~hi~HvSs~~~~~~i~~ak~~g~~vt~ 255 (425)
T PRK07627 176 TVWLRPLDAFLGRGGVAASGAVASRLGLSGVPVAAETIALHTIFELMRVTGARVHLARLSSAAGVALVRAAKAEGLPVTC 255 (425)
T ss_pred EEEEecCChhhhhCCCcCCCHhHHHcCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEEeCCCHHHHHHHHHHHHCCCCeEE
Confidence 9999997643211000 000000000 01 1222233445667777766521 23445555566 556
Q ss_pred EECccchhhc-----------cCCC---------cHHHHHHCCCcEEEcCCCCCCCCC---cCHHH--------HHHHHH
Q 011766 313 SHCPASAMRM-----------LGFA---------PIKEMLHADICVSLGTDGAPSNNR---MSIVD--------EMYLAS 361 (478)
Q Consensus 313 ~~~p~~~~~~-----------~~~~---------~~~~~~~~gv~v~~gsD~~~~~~~---~~~~~--------~~~~~~ 361 (478)
.+||.+.... .-.+ .+.+.+..|...+++|||.|+... .+++. +.....
T Consensus 256 Ev~ph~L~l~~~~~~~~~~~~k~~PPLR~~~d~~~L~~~l~~G~id~i~SDHaP~~~~~k~~~~~~~~~G~~g~e~~~pl 335 (425)
T PRK07627 256 DVGVNHVHLIDVDIGYFDSQFRLDPPLRSQRDREAIRAALADGTIDAICSDHTPVDDDEKLLPFAEATPGATGLELLLPL 335 (425)
T ss_pred EeccchheEeHhHHhccCCceEEeCCCCCHHHHHHHHHHHhcCCCcEEEcCCCCCCHHHccCCHhhCCCCceeHHHHHHH
Confidence 7899853211 0112 345778889999999999765311 01111 111111
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCc--------CChhhh
Q 011766 362 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPV--------HDRITS 433 (478)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~--------~d~~~~ 433 (478)
+.. .....+++++++++++|.|||+++|+ ++|+|++|+.|||+++|.+..+..+. .+|+..
T Consensus 336 ~~~---------~~~~~~i~~~~~l~~~t~~pA~~lg~--~~G~l~~G~~ADlvv~d~~~~~~v~~~~~~s~~~~sp~~g 404 (425)
T PRK07627 336 TLK---------WADEAKVPLARALARITSAPARVLGL--PAGRLAEGAPADLCVFDPDAHWRVEPRALKSQGKNTPFLG 404 (425)
T ss_pred HHH---------HHHhCCCCHHHHHHHHHHHHHHHhCC--CCCcccCCCcCCEEEECCCCcEEEChhhccccCCCCCCcC
Confidence 111 01234699999999999999999999 46999999999999999984222221 223322
Q ss_pred hhhccCCCCeeEEEEccEEEEEC
Q 011766 434 LVYCMRTENVVSVMCNGQWVMKN 456 (478)
Q Consensus 434 ~~~~~~~~~v~~v~v~G~~v~~~ 456 (478)
.. -..+|.+||++|++||++
T Consensus 405 ~~---~~g~v~~t~v~G~~v~~~ 424 (425)
T PRK07627 405 YE---LPGRVRATLVAGQVAFER 424 (425)
T ss_pred CE---eeeEEEEEEECCEEEeec
Confidence 21 125799999999999976
No 63
>PRK02382 dihydroorotase; Provisional
Probab=99.97 E-value=1.5e-29 Score=248.70 Aligned_cols=377 Identities=18% Similarity=0.198 Sum_probs=216.6
Q ss_pred cceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccc
Q 011766 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~ 97 (478)
|.+++|+|++|++.. . +.+++|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+....
T Consensus 1 ~~dl~i~n~~v~~~~---~-~~~~~v~I~dg~I~~i~~~~~~-----~~~~~~id~~g~~v~PG~ID~H~H~~~~g---- 67 (443)
T PRK02382 1 MRDALLKDGRVYYNN---S-LQPRDVRIDGGKITAVGKDLDG-----SSSEEVIDARGMLLLPGGIDVHVHFREPG---- 67 (443)
T ss_pred CceEEEECCEEEeCC---C-ceEEEEEEECCEEEEecCCCCC-----CCCCeEEECCCCEEcCCEeeeeeeccCCC----
Confidence 357899999999632 2 3468999999999999864221 12458999999999999999999983210
Q ss_pred cCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCH-----HHHHHHHHHhCCeEEEeccccc
Q 011766 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV-----SEMAKAVELLGLRACLVQSTMD 172 (478)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~ 172 (478)
....+ ......+.++.+||||+++++.... ..+........-.........
T Consensus 68 --------------------~~~~e---~~~~~~~aa~~gGvTtv~~~~~t~p~~~~~~~~~~~~~~a~~~s~v~~~~~- 123 (443)
T PRK02382 68 --------------------YTHKE---TWYTGSRSAAAGGVTTVVDQPNTDPPTVDGESFDEKAELAARKSIVDFGIN- 123 (443)
T ss_pred --------------------CCchh---hHHHHHHHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhCcCceEEEEEE-
Confidence 11111 1123345689999999999764321 122222222222111111111
Q ss_pred CCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCe-EEEEec-cccccCCHHHHHHHHHHHHHcCCc
Q 011766 173 CGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRI-RIWFGI-RQIMNATDRLLLETRDMAREFKTG 250 (478)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~l~~~~~~a~~~~~~ 250 (478)
.+ . . .... +...+.+. +...+ +++... ......+.+.+.++++.+++.|.+
T Consensus 124 ~~--~--------~-~~~~------------~l~~l~~~----gv~~~gkv~~~~~~~~~~~~~~~l~~~~~~a~~~g~~ 176 (443)
T PRK02382 124 GG--V--------T-GNWD------------PLESLWER----GVFALGEIFMADSTGGMGIDEELFEEALAEAARLGVL 176 (443)
T ss_pred ee--e--------c-cchh------------hHHHHHhc----CccceeEEEEEecCCCcccCHHHHHHHHHHHHhcCCe
Confidence 00 0 0 0011 22222221 22212 222211 122345677899999999999999
Q ss_pred eeEeccCChhhhHHHhhhc--------CCC-Cch------HHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEEC
Q 011766 251 IHMHVAEIPYENQVVMDTR--------KVD-HGT------VTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHC 315 (478)
Q Consensus 251 v~~H~~~~~~~~~~~~~~~--------~~~-~~~------~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~ 315 (478)
+.+|+.............. ... ... ...+......+.+..+.|.+ +.+.++.+++..+.+.+|
T Consensus 177 v~~H~e~~~~~~~~~~~~~g~~~~~~~~~~~p~~~E~~av~~~~~la~~~g~~~hi~h~s--s~~~~~~i~~~~vt~ev~ 254 (443)
T PRK02382 177 ATVHAEDEDLFDELAKLLKGDADADAWSAYRPAAAEAAAVERALEVASETGARIHIAHIS--TPEGVDAARREGITCEVT 254 (443)
T ss_pred EEEecCCHHHHHHhhHhhcCCCCHhhCCCcCCHHHHHHHHHHHHHHHHHhCCCEEEEECC--CHHHHHHHHHCCcEEEEc
Confidence 9999976433211110000 000 000 11222233344555566655 356677777766788899
Q ss_pred ccchhhc-----------cCCCcHH---------HHHHCCCcEEEcCCCCCCCCCc---CHH--------HHHHHHHHHh
Q 011766 316 PASAMRM-----------LGFAPIK---------EMLHADICVSLGTDGAPSNNRM---SIV--------DEMYLASLIN 364 (478)
Q Consensus 316 p~~~~~~-----------~~~~~~~---------~~~~~gv~v~~gsD~~~~~~~~---~~~--------~~~~~~~~~~ 364 (478)
|.+.... .-.+|++ +.++.|...+++|||.|+.... +++ -+.....+..
T Consensus 255 ph~L~l~~~~~~~~~~~~k~~PPlr~~~d~~aL~~~l~~g~i~~i~sDh~P~~~~~K~~~~~~~~~G~~g~e~~~~~~~~ 334 (443)
T PRK02382 255 PHHLFLSRRDWERLGTFGKMNPPLRSEKRREALWERLNDGTIDVVASDHAPHTREEKDADIWDAPSGVPGVETMLPLLLA 334 (443)
T ss_pred hhhhhcCHHHHhccCceEEEcCCCCChHHHHHHHHHHhCCCCCEEEcCCCCCCHHHhcCChhhCCCCcccHHHHHHHHHH
Confidence 9843210 1123333 4567799999999998863100 011 0011111111
Q ss_pred cccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhh----hhhccCC
Q 011766 365 KGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITS----LVYCMRT 440 (478)
Q Consensus 365 ~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~----~~~~~~~ 440 (478)
. ..+.+++++++++++|.|||+++|+. .+|+|++|++|||+|+|.+..+..+.++..+. .......
T Consensus 335 ~---------~~~~~~~l~~~~~~~t~~pA~~~g~~-~~G~l~~G~~AD~vi~d~~~~~~~~~~~~~s~~~~sp~~g~~~ 404 (443)
T PRK02382 335 A---------VRKNRLPLERVRDVTAANPARIFGLD-GKGRIAEGYDADLVLVDPDAAREIRGDDLHSKAGWTPFEGMEG 404 (443)
T ss_pred H---------HHcCCCCHHHHHHHHhHHHHHHcCCC-CCCccCCCCcCCEEEEcCCCcEEEcHHHhcccCCCCCcCCCEe
Confidence 0 01336999999999999999999995 67999999999999999874432221111110 0011112
Q ss_pred CCeeEEEEccEEEEECCeeeccc-HHHHHHH
Q 011766 441 ENVVSVMCNGQWVMKNKKILLLM-RGRLFQL 470 (478)
Q Consensus 441 ~~v~~v~v~G~~v~~~g~~~~~~-~~~~~~~ 470 (478)
..+.+||++|+++|++|+++... .|+++++
T Consensus 405 ~~v~~tiv~G~~v~~~~~~~~~~~~G~~~~~ 435 (443)
T PRK02382 405 VFPELTMVRGTVVWDGDDINAKRGRGEFLRG 435 (443)
T ss_pred ceEEEEEECCEEEEECCEEecCCCCceEeCC
Confidence 36889999999999999987654 5777643
No 64
>PRK13985 ureB urease subunit beta; Provisional
Probab=99.97 E-value=1.1e-29 Score=243.23 Aligned_cols=335 Identities=18% Similarity=0.175 Sum_probs=191.7
Q ss_pred CccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhh-------hhccCCCeEEeCCCCEEeecccccccc
Q 011766 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-------QFSQMADQIIDLQSQILLPGFVNTHVH 88 (478)
Q Consensus 16 ~~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~-------~~~~~~~~viD~~G~~v~PGfID~H~H 88 (478)
....+++|+|++|++. . . +..++|.|+||+|++|++...... .+...++++||++|++|+|||||+|+|
T Consensus 62 ~~~~DlVI~Na~IiD~--~-g-i~kaDI~IkdGrIaaIG~~gn~~~~~~v~~~~~ig~~tevIDa~G~iV~PG~ID~HvH 137 (568)
T PRK13985 62 KEELDLIITNALIIDY--T-G-IYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIH 137 (568)
T ss_pred CCcCCEEEECeEEECC--C-C-cEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEECCCCEEEeCEEEeeCC
Confidence 3467899999999963 2 2 346799999999999997532100 001235689999999999999999999
Q ss_pred cchhhhccccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc-----C-------H---HHH
Q 011766 89 TSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----H-------V---SEM 153 (478)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~-----~-------~---~~~ 153 (478)
+.. +. .+ ..++++||||+++++.. . . ..+
T Consensus 138 ~~~----------------------------P~-~~-------~~AlagGVTTvI~~G~gP~~~T~p~~~tpg~~~i~~m 181 (568)
T PRK13985 138 FIS----------------------------PQ-QI-------PTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWM 181 (568)
T ss_pred CCC----------------------------cc-HH-------HHHhcCceEEEEccCcCCCCCCCCcCCCCcHHHHHHH
Confidence 821 00 01 24799999999984211 1 1 122
Q ss_pred HHHHHHhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCC
Q 011766 154 AKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNAT 233 (478)
Q Consensus 154 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (478)
.+..+...+... ++. .+ + .. .. +.+.+....+... +..+..+..+
T Consensus 182 l~~a~~~pvn~g----f~g--kG----~-----~~---------------~l-~eL~el~~aGA~G----fK~~ed~g~t 226 (568)
T PRK13985 182 LRAAEEYSMNLG----FLG--KG----N-----SS---------------ND-ASLADQIEAGAIG----FKIHEDWGTT 226 (568)
T ss_pred HHHhhccCccEE----Eec--CC----c-----cC---------------CH-HHHHHHHHcCCEE----EEECCccCCC
Confidence 222222211110 000 00 0 00 11 1122322333222 2233444578
Q ss_pred HHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHH-HhhhCCCCCCeeeeeeccCC----hhHHHHHHhc
Q 011766 234 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTF-LDKIEFLQNNLLSAHTVWVN----HTEIGLLSRA 308 (478)
Q Consensus 234 ~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~i~h~~~~~----~~~~~~~~~~ 308 (478)
+..+.++++.+.++++++.+|+....... +++. +.+. .+....+.|..... ++.++.+...
T Consensus 227 ~~~I~~aL~vA~~~dv~V~iHtdtlne~g------------~~E~t~aa~--~gr~iH~~H~egaggghapdi~~~~~~~ 292 (568)
T PRK13985 227 PSAINHALDVADKYDVQVAIHTDTLNEAG------------CVEDTMAAI--AGRTMHTFHTEGAGGGHAPDIIKVAGEH 292 (568)
T ss_pred HHHHHHHHHHHHHcCCEEEEeCCCCCCch------------hhHHHHHHh--cCCeEEEEeccCCCccchhhHHHHcCCC
Confidence 88999999999999999999997543211 1111 1111 11112223322211 3333333333
Q ss_pred CCe-EEECcc--------------------chh-------------hccCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHH
Q 011766 309 GVK-VSHCPA--------------------SAM-------------RMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIV 354 (478)
Q Consensus 309 ~~~-~~~~p~--------------------~~~-------------~~~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~ 354 (478)
++- -++.|+ .+. |...+..=.-|.+.|+...++||+...+.-....
T Consensus 293 nvlp~stnpt~p~t~nt~~e~~dm~m~~h~l~~~~~ed~afa~srir~~tiaaed~l~d~G~~s~~~SDs~~mgr~ge~~ 372 (568)
T PRK13985 293 NILPASTNPTIPFTVNTEAEHMDMLMVCHHLDKSIKEDVQFADSRIRPQTIAAEDTLHDMGIFSITSSDSQAMGRVGEVI 372 (568)
T ss_pred CcccCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhhhhhccccccccCchhhhCCcEEEEeccchhhCccccee
Confidence 321 122222 110 1111222235778999999999986443211111
Q ss_pred HH-HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhh
Q 011766 355 DE-MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITS 433 (478)
Q Consensus 355 ~~-~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~ 433 (478)
.. .+.+......+..+.......-.++.++||+++|.|||+++|+++++|+|++||.||||||+.+++.
T Consensus 373 ~r~~q~a~k~~~~~g~l~~~~~~~dnl~v~eAL~~yTin~A~A~G~e~~vGSLe~GK~ADlVv~d~d~f~---------- 442 (568)
T PRK13985 373 TRTWQTADKNKKEFGRLKEEKGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFFG---------- 442 (568)
T ss_pred eehHHHHHHHHHhcCCCCCccccccccCHHHHHHHHhHHHHHHcCcccCceeECCCCccCEEEEcCccCC----------
Confidence 11 1122222211111110001123589999999999999999999999999999999999999998553
Q ss_pred hhhccCCCCeeEEEEccEEEEEC
Q 011766 434 LVYCMRTENVVSVMCNGQWVMKN 456 (478)
Q Consensus 434 ~~~~~~~~~v~~v~v~G~~v~~~ 456 (478)
..+..||++|+++|..
T Consensus 443 -------~~pe~vi~~G~iv~~~ 458 (568)
T PRK13985 443 -------VKPNMIIKGGFIALSQ 458 (568)
T ss_pred -------CChheEEECCEEEEcc
Confidence 3677999999999985
No 65
>COG1820 NagA N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=99.97 E-value=6.2e-30 Score=233.05 Aligned_cols=346 Identities=21% Similarity=0.260 Sum_probs=213.4
Q ss_pred eEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCC
Q 011766 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (478)
Q Consensus 21 ~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~ 100 (478)
.+|+|++|+|+ ..++.++.|.|+||+|.+|.+ .+. | ...+++|.+|.+|+|||||.|+|.....
T Consensus 2 ~~~~~~~i~t~---~~~~~~~~v~i~dg~I~~i~~-~~~----p-~~~e~id~~G~~l~PGfID~hihG~gG~------- 65 (380)
T COG1820 2 YALKNGRIFTG---HGVLDGGAVVIEDGKIEAVVP-AEL----P-ADAEIIDLKGALLVPGFIDLHIHGGGGA------- 65 (380)
T ss_pred ceeeccEEEcC---cceEECcEEEEcCCEEEEEec-CcC----C-CcceeecCCCCEecccEEEEeecCcCcc-------
Confidence 47899999975 467888999999999999998 222 2 3679999999999999999999985421
Q ss_pred CCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCc-cCHHHHH-------HHHHHhCCeEEEeccccc
Q 011766 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-QHVSEMA-------KAVELLGLRACLVQSTMD 172 (478)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~-~~~~~~~-------~~~~~~g~~~~~~~~~~~ 172 (478)
+++ +.........-.+..++.|+|++...-- .....+. +.....+... ....-
T Consensus 66 -~~~---------------D~~~~~~l~~i~~~~~~~GtTsfLpT~iT~~~e~i~~al~~~~e~~~~~ga~i---lGiHL 126 (380)
T COG1820 66 -DFM---------------DAGSVETLETMAEAHLRHGTTSFLPTLITASLEKIKAALRAIREAIAKGGAQI---LGIHL 126 (380)
T ss_pred -ccc---------------CccCHHHHHHHHHHhhhcCeeeeeeecccCCHHHHHHHHHHHHHHHhccCCce---EEEEe
Confidence 111 1011222233445678999999887432 2222222 1222112111 12334
Q ss_pred CCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCcee
Q 011766 173 CGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIH 252 (478)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~ 252 (478)
.|+++++.....+.++.+. +...+.++.+....++.++.+. ..+...-+ .+++..+.+.|+.+.
T Consensus 127 EGP~ls~~kkGAh~~~~ir-----------~~~~~~~~~~~~~a~g~i~~vT-lAPE~~~~----~e~i~~l~~~giivs 190 (380)
T COG1820 127 EGPFLSPEKKGAHNPEYIR-----------PPDPEELEQLIAAADGLIKLVT-LAPELDGT----KELIRLLANAGIVVS 190 (380)
T ss_pred ecCccCHhhccCCCHHHhC-----------CCCHHHHHHHHhhccCceEEEE-ECCCCCCC----HHHHHHHHhCCeEEE
Confidence 5666665555544444443 2555666677666665554432 22221112 344455566676665
Q ss_pred E-eccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCC----------------eeeeeeccCChhHHHHHHhcC-CeEEE
Q 011766 253 M-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNN----------------LLSAHTVWVNHTEIGLLSRAG-VKVSH 314 (478)
Q Consensus 253 ~-H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----------------~~i~h~~~~~~~~~~~~~~~~-~~~~~ 314 (478)
+ |............+ .+. ....+.++.+..+..| .+|..+.|++|..++.+.+.. ..-.+
T Consensus 191 ~GHS~Atye~~~~a~~-~Ga-~~~THlfNaMs~l~hREPGvvGA~L~~~~~~~eiIaDG~HVhP~~~~ia~~~kg~~~i~ 268 (380)
T COG1820 191 IGHSNATYEQARAAFE-AGA-TFVTHLFNAMSGLHHREPGVVGAALDNPDVYAEIIADGVHVHPAAIRLALKAKGGDKIV 268 (380)
T ss_pred ecCccccHHHHHHHHH-hCc-cEEEeeccCCCCCCCCCCcccceeecCCCeEEEEEccCcccCHHHHHHHHhccCCceEE
Confidence 5 43332221111111 111 1122344444333322 278899999999999888875 44445
Q ss_pred CccchhhccCCCcHHHHH-------HCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHH
Q 011766 315 CPASAMRMLGFAPIKEML-------HADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLR 387 (478)
Q Consensus 315 ~p~~~~~~~~~~~~~~~~-------~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~ 387 (478)
+.+..++..+...-...+ ..| .+.-.|+...++.+.|.+.++...-. .+++++||++
T Consensus 269 LVTDam~a~G~~dg~y~lgg~~V~v~~g--~~~~~~GtLAGS~Ltm~~avrn~v~~--------------~~~~~~eAv~ 332 (380)
T COG1820 269 LVTDAMAAAGLPDGEYILGGQTVTVADG--ARRLEDGTLAGSTLTMDEAVRNLVEW--------------GGISLAEAVR 332 (380)
T ss_pred EEEccccccCCCCccEEECCEEEEEECC--EEECCCCceeeeeeeHHHHHHHHHHH--------------hCCCHHHHHH
Confidence 555566654443322221 122 33345665555667787777655432 2589999999
Q ss_pred HHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEE
Q 011766 388 MATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMK 455 (478)
Q Consensus 388 ~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~ 455 (478)
|+|.+||+.+|+++++|+|++||+||||+||.+ .++..||++|++++.
T Consensus 333 maS~~PA~~lgl~~~~G~i~~G~~Adlvvld~d--------------------~~v~~T~i~G~~~~~ 380 (380)
T COG1820 333 MASLNPAKALGLDDRLGSIKPGKDADLVVLDDD--------------------LNVKATWINGEKVFN 380 (380)
T ss_pred HhhhhHHHHhCCcCcccccCCCcccCEEEECCC--------------------CcEEEEEECCEEeeC
Confidence 999999999999999999999999999999997 799999999999873
No 66
>KOG2584 consensus Dihydroorotase and related enzymes [Nucleotide transport and metabolism]
Probab=99.97 E-value=3e-30 Score=232.35 Aligned_cols=390 Identities=15% Similarity=0.214 Sum_probs=237.2
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~ 96 (478)
.+.+++|+|++|++-|. .. ..||+++||.|.+|+++..+ +.+.++||+.|++|+||.||+|+|+-+..
T Consensus 12 ~s~rllikgg~vvN~d~--~~--~aDV~vedGiI~~vg~~l~i-----pgg~~~ida~g~~ViPGgID~Hthlq~p~--- 79 (522)
T KOG2584|consen 12 ASNRLLIKGGRVVNDDQ--SF--KADVYVEDGIIKEVGENLII-----PGGVKVIDATGKMVIPGGIDPHTHLQMPF--- 79 (522)
T ss_pred cccceeeeCCEEEccCC--ce--eeeEEeccCEEEEecccEEc-----CCCceEEecCCcEEecCccCccceecccc---
Confidence 45679999999997442 33 35999999999999998654 24779999999999999999999993321
Q ss_pred ccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc----CHHHHH-HHHHHhCCeEEEecccc
Q 011766 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMA-KAVELLGLRACLVQSTM 171 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~----~~~~~~-~~~~~~g~~~~~~~~~~ 171 (478)
...-+.++ ..++.++++.+|+|.+.|+.-. +..+.+ +..+.+..+.++.+.+.
T Consensus 80 ------------------~G~ts~Dd----F~~GTkAAlaGGtTmiID~vlp~~~~slv~afe~wr~~Ad~k~cCDyglh 137 (522)
T KOG2584|consen 80 ------------------MGMTSVDD----FFQGTKAALAGGTTMIIDFVLPDKGTSLVEAFEKWREWADPKVCCDYGLH 137 (522)
T ss_pred ------------------CCccchhh----hhcccHHHhcCCceEEEEEecCCCCchHHHHHHHHHhhcCCceeeeeeee
Confidence 11122223 2344567899999999996422 222222 22233334444333221
Q ss_pred cCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCce
Q 011766 172 DCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGI 251 (478)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v 251 (478)
-. + ..|. ..+. +..+.+. .+.+...+++..++...+.+.++.+.+.+..+++.|...
T Consensus 138 v~---I-t~W~-----~~v~------------eem~~l~--~ekGvnsF~~fmayk~~~~v~d~~lye~l~~~~~lgala 194 (522)
T KOG2584|consen 138 VG---I-TWWS-----PSVK------------EEMEILV--KEKGVNSFKFFMAYKDLYMVRDSELYEALKVCAELGALA 194 (522)
T ss_pred Ee---e-eecC-----cchH------------HHHHHHh--hhcCcceEEeeeeeccccccCHHHHHHHHHHHhhcchhh
Confidence 10 1 1121 1122 3333333 345667788888999999999999999999999999999
Q ss_pred eEeccCChhhhHHHhh--hcCCC----C---chH--------HHHhhhCCCCCCeeeeeeccCCh-hHHHHHHhcCCeEE
Q 011766 252 HMHVAEIPYENQVVMD--TRKVD----H---GTV--------TFLDKIEFLQNNLLSAHTVWVNH-TEIGLLSRAGVKVS 313 (478)
Q Consensus 252 ~~H~~~~~~~~~~~~~--~~~~~----~---~~~--------~~l~~~~~~~~~~~i~h~~~~~~-~~~~~~~~~~~~~~ 313 (478)
.+|+.......+.... ..++. + ++. .++.-.........+.|..+.+. +.+.++++.|. ++
T Consensus 195 ~vHAEngd~iae~q~~~l~~gitgPEgh~lSRPee~EaEA~~rai~ia~~~ncPlyvvhVmsksaa~~Ia~aRk~g~-~v 273 (522)
T KOG2584|consen 195 MVHAENGDAIAEGQQRLLELGITGPEGHELSRPEELEAEATNRAITIARQANCPLYVVHVMSKSAADAIALARKKGR-VV 273 (522)
T ss_pred eehhhcchhhhhhhhHHHHcCCcCcccccccCchhhhHHHHHHHHHHHHhcCCCcceEEEeehhHHHHHHHHHhcCc-ee
Confidence 9999765433322211 11111 0 111 12222333444566777776654 45666666553 33
Q ss_pred ECccchh------------------hccCCCc----------HHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHh-
Q 011766 314 HCPASAM------------------RMLGFAP----------IKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLIN- 364 (478)
Q Consensus 314 ~~p~~~~------------------~~~~~~~----------~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~- 364 (478)
..+.... +....+| +-.++..|..-..|||+++.+... ..+..-.+..
T Consensus 274 ~gepita~l~~dg~hy~~~~w~~Aa~~v~sPPlr~d~~t~~~L~~lLa~g~L~~tgSdhctf~~~q---KalgKddFt~i 350 (522)
T KOG2584|consen 274 FGEPITASLGTDGSHYWSKDWDHAAAFVTSPPLRPDPTTPDGLMDLLAEGDLQLTGSDHCTFTTEQ---KALGKDDFTKI 350 (522)
T ss_pred ecccchhhhcccchhhccCChhhcceeeeCCCCCCCCCCHHHHHHHHhcCccceeecCCCCCCHHH---HhhccCccccC
Confidence 3332110 0001122 346789999999999998763111 0000000000
Q ss_pred -cc------ccc--ccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhh
Q 011766 365 -KG------REV--FANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLV 435 (478)
Q Consensus 365 -~~------~~~--~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~ 435 (478)
++ +.. +..+ ...+.|++.+.+...++|+|+++++.+++|+|++|++|||||||++.......+..++...
T Consensus 351 p~GvnGvedrMsviwekg-v~~G~md~~~fVavtstnaAkifnlYprKGrIavGsDADiVIwdp~at~tIS~~th~~~~d 429 (522)
T KOG2584|consen 351 PNGVNGVEDRMSVIWEKG-VHSGKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSDADIVIWDPNATKTISAKTHHSAND 429 (522)
T ss_pred CCccccccccceeeeehh-cccCccCcccEEEEecccchhheeccCcCceecccCCCcEEEECCCcceEecccccccccc
Confidence 00 000 0001 1334578899999999999999999999999999999999999998654444333333221
Q ss_pred hccC-----CCCeeEEEEccEEEEECCeeec-ccHHHHH
Q 011766 436 YCMR-----TENVVSVMCNGQWVMKNKKILL-LMRGRLF 468 (478)
Q Consensus 436 ~~~~-----~~~v~~v~v~G~~v~~~g~~~~-~~~~~~~ 468 (478)
+.+- ...+..||.+|++||+||++.- ...|+++
T Consensus 430 ~NifEGm~~~G~plvtIsrGriv~eng~~~v~~g~G~fi 468 (522)
T KOG2584|consen 430 FNIFEGMTVHGVPLVTISRGRVVYENGNLVVTEGSGRFI 468 (522)
T ss_pred ceeecCcEecceeEEEEeCCeEEEecCcEEEecCCCcee
Confidence 1111 1458899999999999999864 3355443
No 67
>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM. This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs.
Probab=99.97 E-value=6.4e-29 Score=237.34 Aligned_cols=167 Identities=20% Similarity=0.225 Sum_probs=119.8
Q ss_pred CHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeE
Q 011766 233 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKV 312 (478)
Q Consensus 233 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~ 312 (478)
..+.+.+++++|++.|+++..|..+........ ...+. ..+.| .++.+..+.+.+.|+.+
T Consensus 207 ~~e~i~~~v~~A~~~G~~v~sH~~~~~e~i~~a--------------~~~Gv----~~~E~--~~t~e~a~~~~~~G~~v 266 (376)
T TIGR02318 207 GLANRSEIAALARARGIPLASHDDDTPEHVAEA--------------HDLGV----TISEF--PTTLEAAKEARSLGMQI 266 (376)
T ss_pred cHHHHHHHHHHHHHCCCeEEEecCCCHHHHHHH--------------HHCCC----Chhcc--CCCHHHHHHHHHcCCeE
Confidence 467899999999999999999996544322211 11121 11233 36788899999999998
Q ss_pred EECccchhhc---cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHH
Q 011766 313 SHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMA 389 (478)
Q Consensus 313 ~~~p~~~~~~---~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~ 389 (478)
..+.....+. .+..++..+++.|+.++++||+.+. .++..+.... . ...+++++++++++
T Consensus 267 ~~~~p~~~r~~~~~~~~~l~~~~~~G~~~~l~SD~~p~----~~l~~~~~~~-~------------~~~gl~~~~al~~~ 329 (376)
T TIGR02318 267 LMGAPNIVRGGSHSGNLSARELAHEGLLDVLASDYVPA----SLLLAAFQLA-D------------DVEGIPLPQAVKMV 329 (376)
T ss_pred EECCccccccccccchHHHHHHHHCCCcEEEEcCCCcH----HHHHHHHHHH-H------------hhcCCCHHHHHHHH
Confidence 8775422222 2356788899999999999999553 2222221111 0 11258999999999
Q ss_pred hHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEE
Q 011766 390 TINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVM 454 (478)
Q Consensus 390 T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~ 454 (478)
|.|||+.+|++ ++|+|++|++|||+++|... ....+..||++|++||
T Consensus 330 T~npA~~lgl~-~~G~I~~G~~ADlvvvd~~~-----------------~~~~v~~v~~~G~~v~ 376 (376)
T TIGR02318 330 TKNPARAVGLS-DRGSIAPGKRADLVRVHRVD-----------------GVPRIRAVWRAGRRVY 376 (376)
T ss_pred hHHHHHHcCCC-CCCcCCCCCcccEEEEcCCC-----------------CCccceEEEECCEEeC
Confidence 99999999996 57999999999999999841 0147899999999886
No 68
>cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.
Probab=99.97 E-value=7e-29 Score=247.68 Aligned_cols=176 Identities=23% Similarity=0.198 Sum_probs=134.0
Q ss_pred ccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcC
Q 011766 230 MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAG 309 (478)
Q Consensus 230 ~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~ 309 (478)
..++++.+.++++.+++.|+++++|+.+.......+ .. ........+..+.+..+.|+..+++++++++++.|
T Consensus 290 ~~~~~e~l~~~~~~a~~~g~~v~~Ha~gd~~i~~~l-~~------~~~~~~~~g~~~~r~~i~H~~~~~~~~~~~l~~~g 362 (479)
T cd01300 290 LLISPEELEELVRAADEAGLQVAIHAIGDRAVDTVL-DA------LEAALKDNPRADHRHRIEHAQLVSPDDIPRFAKLG 362 (479)
T ss_pred ccCCHHHHHHHHHHHHHCCCCEEEEEecHHHHHHHH-HH------HHHHHHhcCCCCCCceeeecccCCHHHHHHHHHcC
Confidence 456899999999999999999999998754432211 10 11122233444667899999999999999999999
Q ss_pred CeEEECccchhh--------------ccCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCC
Q 011766 310 VKVSHCPASAMR--------------MLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTT 375 (478)
Q Consensus 310 ~~~~~~p~~~~~--------------~~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (478)
+.+++||.+... .....|++.+++.|+++++|||++.. +.+++..++.+.......... ...
T Consensus 363 v~~~~~P~~~~~~~~~~~~~~lg~~~~~~~~p~~~~~~~Gv~v~lGSD~~~~--~~~p~~~~~~av~~~~~~~~~--~~~ 438 (479)
T cd01300 363 VIASVQPNHLYSDGDAAEDRRLGEERAKRSYPFRSLLDAGVPVALGSDAPVA--PPDPLLGIWAAVTRKTPGGGV--LGN 438 (479)
T ss_pred CceEeCcccccCchHHHHHhcccHHHHhcCchHHHHHHCCCeeeccCCCCCC--CCCHHHHHHHHheeeCCCCCC--CCC
Confidence 999999986421 13578999999999999999999654 367787777665432111000 001
Q ss_pred CCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEE
Q 011766 376 DPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVV 416 (478)
Q Consensus 376 ~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv 416 (478)
.++++|++++++++|.|||+++|+++++|+|++||.|||||
T Consensus 439 ~~~~ls~~~al~~~T~~~A~~lg~e~~~GsLe~Gk~ADlvv 479 (479)
T cd01300 439 PEERLSLEEALRAYTIGAAYAIGEEDEKGSLEPGKLADFVV 479 (479)
T ss_pred ccccCCHHHHHHHHHHHHHHHhccccccccccCCcccceeC
Confidence 44679999999999999999999999999999999999986
No 69
>cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.97 E-value=4.3e-30 Score=245.18 Aligned_cols=336 Identities=16% Similarity=0.128 Sum_probs=192.7
Q ss_pred CCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCCCCchHHhhhccccccCCCChHHHHHH
Q 011766 47 QDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYIS 126 (478)
Q Consensus 47 ~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (478)
||||++|++.... +.+.++||++|++|+|||||+|+|++...........+..+ ...+..+.+...+.+..
T Consensus 1 ~gkI~~i~~~~~~-----~~~~~vid~~g~~v~Pg~id~h~h~~~~~~~~~~~~~d~~e----~~~~~~p~~~~~d~~~~ 71 (359)
T cd01309 1 DGKIVAVGAEITT-----PADAEVIDAKGKHVTPGLIDAHSHLGLDEEGGVRETSDANE----ETDPVTPHVRAIDGINP 71 (359)
T ss_pred CCEEEEEcCCCCC-----CCCCeEEeCCCCEEcCcEEecccccCccccCCCcCcCCccc----cCCCCCceeEeecccCC
Confidence 7999999986542 13668999999999999999999998754432222111110 11222233344444444
Q ss_pred HHHHHHHHHhcCcceeecCCcc-CHHH------------HHHHHHHhCCeEEEecccccCCCCCCCcccccCCcccCCCC
Q 011766 127 TLLCGIELIHSGVTCFAEAGGQ-HVSE------------MAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPD 193 (478)
Q Consensus 127 ~~~~~~~~l~~GvTtv~~~~~~-~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (478)
....+..++.+|||++...++. ..-. ..+.+........ ..+ +.............+.
T Consensus 72 ~~~~~~~a~~~GvT~~~v~p~~~~~~gg~~~~i~~~~~~~~~~~~~~~~~~~---~a~------g~~~~~~~~~~~~~p~ 142 (359)
T cd01309 72 DDEAFKRARAGGVTTVQVLPGSANLIGGQGVVIKTDGGTIEDMFIKAPAGLK---MAL------GENPKRVYGGKGKEPA 142 (359)
T ss_pred CCHhHHHHHhcCceEEEecCCCCCcccceEEEEECCCCCHHHhcccCCceeE---Eec------CCCCcccccccCCCcc
Confidence 4556667899999998654321 1000 0000000000000 000 0000000011111122
Q ss_pred CCccccccchhHHHHHHH---hcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcC
Q 011766 194 SSISFNFVSSSQKELYAK---HHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK 270 (478)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~ 270 (478)
+++.... ..++.+.+ +.......-.. ...... ....++.+.+.++.. +++.+|+........
T Consensus 143 trmg~~~---~lr~~~~~a~~y~~~~~~~~~~-~~~~~~---~d~~l~~l~~~~~~~-~~v~vHa~~~~~i~~------- 207 (359)
T cd01309 143 TRMGVAA---LLRDAFIKAQEYGRKYDLGKNA-KKDPPE---RDLKLEALLPVLKGE-IPVRIHAHRADDILT------- 207 (359)
T ss_pred chHHHHH---HHHHHHHHHHHHHHHhhhhhhc-ccCCCC---CCccHHHHHHHHcCC-eeEEEEeCCHHHHHH-------
Confidence 2221110 11111111 00000000000 000001 112344555555432 889999986443211
Q ss_pred CCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc------cCCCcHHHHHHCC-CcEEEcCC
Q 011766 271 VDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM------LGFAPIKEMLHAD-ICVSLGTD 343 (478)
Q Consensus 271 ~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~------~~~~~~~~~~~~g-v~v~~gsD 343 (478)
.+.+..+.+ -+..+.|+... ++.++++++.++.++++|..+.+. .+..+++.+.++| ++++++||
T Consensus 208 ----~l~~~~e~g---~~~~i~H~~~~-~~~~~~la~~gv~v~~~P~~~~~~~~~~~~~~~~~~~~l~~aGGv~valgsD 279 (359)
T cd01309 208 ----AIRIAKEFG---IKITIEHGAEG-YKLADELAKHGIPVIYGPTLTLPKKVEEVNDAIDTNAYLLKKGGVAFAISSD 279 (359)
T ss_pred ----HHHHHHHcC---CCEEEECchhH-HHHHHHHHHcCCCEEECccccccccHHHhhcchhhHHHHHHcCCceEEEECC
Confidence 222333333 35788999987 888999999999999999865432 3567888999998 99999999
Q ss_pred CCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCC
Q 011766 344 GAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWP 423 (478)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~ 423 (478)
++.. +...++.....+. ..+++.+++++++|.|||+++|+++++|+|++|+.|||||||.+++.
T Consensus 280 ~~~~-~~~~l~~~~~~a~---------------~~gl~~~~al~~~T~n~A~~lg~~~~~G~l~~G~~ADlvv~d~dpl~ 343 (359)
T cd01309 280 HPVL-NIRNLNLEAAKAV---------------KYGLSYEEALKAITINPAKILGIEDRVGSLEPGKDADLVVWNGDPLE 343 (359)
T ss_pred CCCc-cchhHHHHHHHHH---------------HcCCCHHHHHHHHHHHHHHHhCCCCCcccCCCCCccCEEEECCCccc
Confidence 8543 1112222221111 12599999999999999999999988999999999999999998654
Q ss_pred CCCcCChhhhhhhccCCCCeeEEEEccEEEE
Q 011766 424 MVPVHDRITSLVYCMRTENVVSVMCNGQWVM 454 (478)
Q Consensus 424 ~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~ 454 (478)
. ..++..||++|++||
T Consensus 344 ~---------------~~~v~~v~i~G~~v~ 359 (359)
T cd01309 344 P---------------TSKPEQVYIDGRLVY 359 (359)
T ss_pred c---------------cCcccEEEECCEEeC
Confidence 2 258999999999886
No 70
>PRK13308 ureC urease subunit alpha; Reviewed
Probab=99.97 E-value=7.5e-29 Score=238.49 Aligned_cols=325 Identities=19% Similarity=0.185 Sum_probs=191.9
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhh--h-----hhccCCCeEEeCCCCEEeeccccccccc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL--Q-----QFSQMADQIIDLQSQILLPGFVNTHVHT 89 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~--~-----~~~~~~~~viD~~G~~v~PGfID~H~H~ 89 (478)
..++++|+|++|+++. .. +..++|.|+||+|++|++....+ . .....++++||++|++|+|||||+|+|+
T Consensus 66 ~~~DlVItNa~IIDp~--~G-i~kaDIgIkDGrIaaIG~~~npd~~~gv~p~~~~g~~teVIDaeG~IVtPG~ID~HVH~ 142 (569)
T PRK13308 66 GALDFVLCNVTVIDPV--LG-IVKGDIGIRDGRIVGIGKAGNPDIMDGVDPRLVVGPGTDVRPAEGLIATPGAIDVHVHF 142 (569)
T ss_pred CcCCEEEECeEEEcCC--CC-eEEeEEEEECCEEEEecCCCCccccccccccccCCCCCeEEECCCCEEEeCEEEeeeCC
Confidence 4678999999999542 23 45679999999999999753110 0 0011356899999999999999999998
Q ss_pred chhhhccccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCc--------cCHH---HHHHHHH
Q 011766 90 SQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------QHVS---EMAKAVE 158 (478)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~--------~~~~---~~~~~~~ 158 (478)
.. + . ..+.++.+||||+++.+. .... .+.+..+
T Consensus 143 ~~----------------------------P-g-------~~~aALagGVTTVi~gg~gPt~p~~t~g~~~i~~~l~aa~ 186 (569)
T PRK13308 143 DS----------------------------A-Q-------LVDHALASGITTMLGGGLGPTVGIDSGGPFNTGRMLQAAE 186 (569)
T ss_pred CC----------------------------c-c-------HHHHHHcCCCcEEecCCcCCCCCCCCCCHHHHHHHHHHHh
Confidence 21 0 0 014589999999998421 1122 2222222
Q ss_pred HhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHH
Q 011766 159 LLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLL 238 (478)
Q Consensus 159 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 238 (478)
...+... .+.. +. .. .. +.+.++...+...++ .+..+..+++.+.
T Consensus 187 ~~pvN~g----~~gk--G~---------~s---------------~~-aeL~eli~aGA~GfK----i~ed~g~t~~~i~ 231 (569)
T PRK13308 187 AWPVNFG----FLGR--GN---------SS---------------KP-AALIEQVEAGACGLK----IHEDWGAMPAAID 231 (569)
T ss_pred cCCccEE----EEcC--Cc---------cc---------------CH-HHHHHHHHCCCCEEe----ecCCCCCCHHHHH
Confidence 2221111 1100 00 00 11 123333333333333 2233345788999
Q ss_pred HHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHH-HhhhCCCCCCeeeeeeccCC----hhHHHHHHhcCCe-E
Q 011766 239 ETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTF-LDKIEFLQNNLLSAHTVWVN----HTEIGLLSRAGVK-V 312 (478)
Q Consensus 239 ~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~i~h~~~~~----~~~~~~~~~~~~~-~ 312 (478)
++++.|+++++++.+|+....... +.+. +.+.. +....+.|..... ++.++.+...++- -
T Consensus 232 ~aL~~A~~~dv~VaiHadtlne~g------------~~E~t~~a~~--gr~iH~~H~egaggghapd~l~~~~~~n~lp~ 297 (569)
T PRK13308 232 TCLEVADEYDFQVQLHTDTLNESG------------FVEDTLAAIG--GRTIHMYHTEGAGGGHAPDIIRVVGEPHCLPS 297 (569)
T ss_pred HHHHHHHhcCCEEEEeCCCcCcch------------HHHHHHHHhc--CCeEEEEeccCCccCchhHHHHHhCCCCccCC
Confidence 999999999999999997632211 1111 11111 1222333333211 3444444443332 1
Q ss_pred EECccc--------------------h-------------hhccCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHH
Q 011766 313 SHCPAS--------------------A-------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYL 359 (478)
Q Consensus 313 ~~~p~~--------------------~-------------~~~~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~ 359 (478)
++.|+. + .|...+..=.-|.+.|+...++||+...+ .+.+.+..
T Consensus 298 stnpt~p~t~nt~~e~~dm~m~~h~l~~~~~~d~afa~srir~~ti~ae~~l~d~g~~s~~~sds~~mg---r~~e~i~r 374 (569)
T PRK13308 298 STNPTNPYTVNTFDEHLDMTMVCHHLNPDVPEDVAFAESRIRAQTIAAEDVLHDIGAISMLGSDSQGMG---RIAEVIAR 374 (569)
T ss_pred CCCCCCCCccCchhhhcCeEEEecCCCCCCcchhhhhhhhccceeeccCchhhcCCcEEEEecchHHHh---HHHHHHHH
Confidence 222221 0 01111222235778999999999986542 34566666
Q ss_pred HHHHhcccccccCCCCCCCCCCHH-----------HHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcC
Q 011766 360 ASLINKGREVFANGTTDPAALPAE-----------TVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVH 428 (478)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~ls~~-----------~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~ 428 (478)
.++........ ...++.+ ..|+++|.|||+++|+++++|+|++||.||||+|+.+.+.
T Consensus 375 ~~q~a~~~~~~------~g~l~~~~~~~~dn~rv~r~L~~~T~npA~alGi~~~vGsLe~Gk~ADLVv~d~d~fg----- 443 (569)
T PRK13308 375 TWQLASKMKDQ------RGPLPEDRGTFADNARIKRYIAKYTINPAITFGIDDHIGSLEPGKLADIVLWRPAFFG----- 443 (569)
T ss_pred HHHHHHHHhhc------CCCCCcccccCCchhhhhHHHHHHhHHHHHHcCCCCCceeeCCCCcCCEEEECCcccC-----
Confidence 65544322111 1123333 3799999999999999988999999999999999987432
Q ss_pred ChhhhhhhccCCCCeeEEEEccEEEEE
Q 011766 429 DRITSLVYCMRTENVVSVMCNGQWVMK 455 (478)
Q Consensus 429 d~~~~~~~~~~~~~v~~v~v~G~~v~~ 455 (478)
.++..||++|+++|.
T Consensus 444 ------------v~p~~ti~~G~iv~~ 458 (569)
T PRK13308 444 ------------IKPELVIKGGFPAWA 458 (569)
T ss_pred ------------CCeeEEEECCEEEEe
Confidence 368899999999886
No 71
>PLN02303 urease
Probab=99.97 E-value=8.3e-29 Score=245.76 Aligned_cols=345 Identities=17% Similarity=0.165 Sum_probs=199.0
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhh--hh-----hhccCCCeEEeCCCCEEeeccccccccc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADI--LQ-----QFSQMADQIIDLQSQILLPGFVNTHVHT 89 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~--~~-----~~~~~~~~viD~~G~~v~PGfID~H~H~ 89 (478)
...+++|+|++|++.. . +..++|+|+||+|++|++.... .. .....++++||++|++|+|||||+|+|+
T Consensus 332 ~~~DlVItNa~IID~~---G-i~kaDI~IkDGrIvaIGkagnp~i~~gv~~~~~~g~~teVIDAeGlIVtPG~ID~HVHf 407 (837)
T PLN02303 332 DSLDTVITNAVIIDYT---G-IYKADIGIKDGLIVGIGKAGNPDVMDGVTSNMIVGVNTEVIAGEGMIVTAGGIDCHVHF 407 (837)
T ss_pred CcCCEEEeCeEEECCC---C-cEEeEEEEECCEEEEecCCCCcccccccccccccCCCCeEEECCCCEEEeCEEEeecCC
Confidence 3578999999999632 2 3567999999999999974311 00 0111246899999999999999999998
Q ss_pred chhhhccccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc------------CHHHHHHHH
Q 011766 90 SQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ------------HVSEMAKAV 157 (478)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~------------~~~~~~~~~ 157 (478)
.. + .. ..+++.+|+||++..|.. ....+....
T Consensus 408 ~~------------------------P----g~--------~~eaLasGVTTai~GGtgp~pnT~ptt~t~g~e~I~~~L 451 (837)
T PLN02303 408 IC------------------------P----QL--------ATEAIASGITTLVGGGTGPAHGTCATTCTPAPSHMKLML 451 (837)
T ss_pred CC------------------------C----cH--------HHHHHHHhHHHHHhcCCCCCCcccCcCCCCCHHHHHHHH
Confidence 21 0 00 123566677776664321 112222222
Q ss_pred HH---hCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCH
Q 011766 158 EL---LGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATD 234 (478)
Q Consensus 158 ~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (478)
+. ..+..... +.+ ... ...+ +.++...+... +..+..+..++
T Consensus 452 ~aa~~~pvn~Gf~------gkG---------~~s---------------~l~e-L~elieaGa~G----fK~h~d~gvTp 496 (837)
T PLN02303 452 QSTDDLPLNFGFT------GKG---------NTA---------------KPEG-LHEIIKAGAMG----LKLHEDWGTTP 496 (837)
T ss_pred HhcccCCCcEEEE------ccC---------ccc---------------CHHH-HHHHHHcCcEE----EEECCCCCCCH
Confidence 21 11111110 000 000 1111 22222222222 33344556789
Q ss_pred HHHHHHHHHHHHcCCceeEeccCChhh---hHHHhhhcCCCCchHHHHhhhCCCCCCe-----------eeeeecc-CCh
Q 011766 235 RLLLETRDMAREFKTGIHMHVAEIPYE---NQVVMDTRKVDHGTVTFLDKIEFLQNNL-----------LSAHTVW-VNH 299 (478)
Q Consensus 235 ~~l~~~~~~a~~~~~~v~~H~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----------~i~h~~~-~~~ 299 (478)
+.+.++++.|+++++++++|+.. ..+ .+.....++ .+++++++..++++.+. ++.-.+. ..|
T Consensus 497 elL~raLe~AkelGVpVaIHAEd-LnE~G~vE~t~~a~G--~RpIh~~h~~Ga~gghapdi~~~~~~~nvlpsstnpt~p 573 (837)
T PLN02303 497 AAIDNCLDVAEEYDIQVTIHTDT-LNESGCVEHSIAAFK--GRTIHTYHSEGAGGGHAPDIIKVCGVKNVLPSSTNPTRP 573 (837)
T ss_pred HHHHHHHHHHHHcCCEEEEecCc-ccccchHHHHHHHHC--CChHHHHHhcCCCCCCCcHHHHhcCCCCccCCCCCCCCC
Confidence 99999999999999999999544 433 333444433 45788888888776421 0000000 001
Q ss_pred hHHHHHHhcCCeEEECccchh-------------hccCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHH-HHHHHHHhc
Q 011766 300 TEIGLLSRAGVKVSHCPASAM-------------RMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDE-MYLASLINK 365 (478)
Q Consensus 300 ~~~~~~~~~~~~~~~~p~~~~-------------~~~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~-~~~~~~~~~ 365 (478)
-....+.++--.+.+|...+. |...+..=.-|.+.|+..+++||+...+.-...... .+.+.....
T Consensus 574 ~t~nt~~e~~dm~m~~h~l~~~~~edvafa~srir~~tiaaed~l~d~G~~s~~~SDs~amgr~ge~i~r~~q~A~k~~~ 653 (837)
T PLN02303 574 YTKNTIDEHLDMLMVCHHLDKNIPEDVAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVITRTWQTAHKMKS 653 (837)
T ss_pred CccCchhhhcCeEEeecCCCCCCcchhhhhhhhccchhhccchhhhccCCEEEEeccchhhCcccceeeehHHHHHHHHH
Confidence 112222222222333332211 112223334677899999999998644322111111 112222222
Q ss_pred ccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeE
Q 011766 366 GREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVS 445 (478)
Q Consensus 366 ~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~ 445 (478)
.+..+.......-..++++||+++|.|||+++|+++.+|+|++||.||||||+++.+. ..+.+
T Consensus 654 ~~g~l~~~~~~~dn~rv~~aL~~~TiN~A~AlG~~~~vGSLe~GK~ADlVvw~~~~fg-----------------~~~~~ 716 (837)
T PLN02303 654 QRGALEPRGADNDNFRIKRYIAKYTINPAIAHGMSHFVGSVEVGKLADLVLWKPAFFG-----------------AKPEM 716 (837)
T ss_pred hcCCCCCccccccccCHHHHHHHHhHHHHHHCCcccCceeeCCCcccCEEEecccccC-----------------CCeeE
Confidence 2211111111123478899999999999999999999999999999999999987432 47899
Q ss_pred EEEccEEEEEC
Q 011766 446 VMCNGQWVMKN 456 (478)
Q Consensus 446 v~v~G~~v~~~ 456 (478)
||++|+++|..
T Consensus 717 vi~~G~ivy~~ 727 (837)
T PLN02303 717 VIKGGQIAWAQ 727 (837)
T ss_pred EEECCEEEEcc
Confidence 99999999986
No 72
>COG0044 PyrC Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism]
Probab=99.97 E-value=3.4e-28 Score=232.65 Aligned_cols=366 Identities=18% Similarity=0.214 Sum_probs=211.5
Q ss_pred ceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcccc
Q 011766 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (478)
Q Consensus 19 ~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~ 98 (478)
++++|+|++++++ + ....++|+|++|+|++|+..... . .+.++||++|++|+|||||.|+|+..
T Consensus 1 ~~~lIk~~~iv~~-~---~~~~~di~i~~g~I~~Ig~~l~~----~-~~~~iiD~~g~~v~PG~ID~HVH~re------- 64 (430)
T COG0044 1 MDLLIKNARVVDP-G---EDEVADILIKDGKIAAIGKNLEP----T-SGAEIIDAKGLLVLPGLVDLHVHFRE------- 64 (430)
T ss_pred CcEEEeccEEEcC-C---CceEecEEEECCEEEEeccCCCC----C-CCCcEEECCCCEEccCeeEEEEecCC-------
Confidence 4689999999964 2 23567999999999999986432 1 36789999999999999999999943
Q ss_pred CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCH-----HHHHHHHHHhCCeEEEecccccC
Q 011766 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV-----SEMAKAVELLGLRACLVQSTMDC 173 (478)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~ 173 (478)
+.+... .......+.++++|+|++.+++...+ ...........-+..+......
T Consensus 65 -----------------pg~~~k---e~~~tgs~AAa~GG~Ttv~dmPnt~P~~~~~~~~~~~~~~a~~~~~vd~~~~~- 123 (430)
T COG0044 65 -----------------PGFEHK---ETFETGSRAAAAGGVTTVVDMPNTKPPIDTAEALEDKLERAKGKSVVDYAFYG- 123 (430)
T ss_pred -----------------CCcchh---hhHHHHHHHHHcCCceEEEECCCCCCCCCCHHHHHHHHHHhhccceeEEEEEE-
Confidence 112211 22344667899999999999864332 2222222222111111110000
Q ss_pred CCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeE
Q 011766 174 GEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHM 253 (478)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~ 253 (478)
+...... ...++.+... ...++.+.. ........+.+.+..+.+.+.|..+.+
T Consensus 124 --~it~~~~---------------------~~~~~~~~~~---~~g~~~F~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (430)
T COG0044 124 --GLTKGNL---------------------GKLELTERGV---EAGFKGFMD-DSTGALDDDVLEEALEYAAELGALILV 176 (430)
T ss_pred --EEecccc---------------------chhhhhhhhh---ccceEEEec-CCcCcCCHHHHHHHHHHHHhcCCeEEE
Confidence 0000000 1111122111 111222222 222345778899999999999999999
Q ss_pred eccCChhhhHHHh--hhc----CCCCc-h------H-HHHhhhCCCCCCeeeeeeccCC-hhHHHHHHhcC--CeEEECc
Q 011766 254 HVAEIPYENQVVM--DTR----KVDHG-T------V-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG--VKVSHCP 316 (478)
Q Consensus 254 H~~~~~~~~~~~~--~~~----~~~~~-~------~-~~l~~~~~~~~~~~i~h~~~~~-~~~~~~~~~~~--~~~~~~p 316 (478)
|+.+......... ... ..... . + ..+......+.+..+.|.+.-. -+.+..++..| +.+.+||
T Consensus 177 H~Ed~~~~~~~~~~~g~~~~~~~~~~~p~~aE~~~iar~~~la~~~g~~vhi~HiSt~~sv~li~~ak~~g~~vt~Evtp 256 (430)
T COG0044 177 HAEDDDLIAEGVMNEGLRAPELGLAGRPPIAEASAIARDLELARATGARVHICHISTKESVELIRAAKAEGIRVTAEVTP 256 (430)
T ss_pred ecCChhHhhhHHHhcCccchhhccCCCChHHHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHHHHHHhhcCCceEEeecc
Confidence 9977643221111 000 00011 1 1 1122222333556566655321 12334444443 3467888
Q ss_pred cchhhc-----------cCCCc---------HHHHHHCCCcEEEcCCCCCCCCCcC---HH--------HHHHHHHHHhc
Q 011766 317 ASAMRM-----------LGFAP---------IKEMLHADICVSLGTDGAPSNNRMS---IV--------DEMYLASLINK 365 (478)
Q Consensus 317 ~~~~~~-----------~~~~~---------~~~~~~~gv~v~~gsD~~~~~~~~~---~~--------~~~~~~~~~~~ 365 (478)
.+.... .-.+| +.+.+..|...+++|||.|+..... +. -+..+..+..
T Consensus 257 hHL~l~~~~~~~~~~~~k~nPPLR~~~dr~aL~~~l~~G~ID~iasDHaPht~eeK~~~f~~ap~G~~glE~~lpl~l~- 335 (430)
T COG0044 257 HHLLLDEEDIEDLGTLAKVNPPLRDEEDREALWEALKDGVIDVIASDHAPHTLEEKRLPFEEAPSGIPGLETALPLLLT- 335 (430)
T ss_pred hheEccHhHhhccCcceEECCCCCCHHHHHHHHHHHhCCCCcEEEcCCCCCCHHHhccchhhCCCCCccHHHHHHHHHH-
Confidence 753210 11233 3467788999999999988742111 00 0111111111
Q ss_pred ccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCc--------CChhhhhhhc
Q 011766 366 GREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPV--------HDRITSLVYC 437 (478)
Q Consensus 366 ~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~--------~d~~~~~~~~ 437 (478)
......+|+++.++++|.|||+++|+.. +|.|++|++|||+|+|.+..+..+. ..|+...
T Consensus 336 --------lv~~g~lsl~~~v~~~S~nPA~ifgl~~-~g~i~~G~~ADl~lvD~~~~~~i~~~~~~sk~~~sPf~G~--- 403 (430)
T COG0044 336 --------LVKKGRLSLERLVELLSTNPARIFGLPP-KGAIEEGADADLVLVDPDEEWTIRAEELYSKAKNSPFEGF--- 403 (430)
T ss_pred --------HHHcCCcCHHHHHHHHhhCHHHHhCCCC-CCcccCCCccCEEEEcCCCCeEEchhhhccccCCCCcCCC---
Confidence 0123359999999999999999999966 7889999999999999984222221 1233322
Q ss_pred cCCCCeeEEEEccEEEEECCeeec
Q 011766 438 MRTENVVSVMCNGQWVMKNKKILL 461 (478)
Q Consensus 438 ~~~~~v~~v~v~G~~v~~~g~~~~ 461 (478)
.-..+|.+||++|+++|.++....
T Consensus 404 ~~~g~v~~Ti~rG~~v~~~~~~~~ 427 (430)
T COG0044 404 ELKGRVVATILRGKVVYEDGEVIA 427 (430)
T ss_pred EEeeeEEEEEECCEEEEECCcEec
Confidence 123689999999999999997654
No 73
>PRK08044 allantoinase; Provisional
Probab=99.97 E-value=6e-29 Score=243.76 Aligned_cols=376 Identities=16% Similarity=0.188 Sum_probs=210.4
Q ss_pred cceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccc
Q 011766 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~ 97 (478)
+++++|+|++|++.++ . ..++|+|+||+|++|++... .+.++||++|++|+|||||+|+|+....
T Consensus 2 ~~~~~i~n~~vi~~~~---~-~~~~i~I~dg~I~~i~~~~~-------~~~~~iD~~G~~v~Pg~iD~h~h~~~~~---- 66 (449)
T PRK08044 2 SFDLIIKNGTVILENE---A-RVVDIAVKGGKIAAIGQDLG-------DAKEVMDASGLVVSPGMVDAHTHISEPG---- 66 (449)
T ss_pred CceEEEECcEEEcCCC---C-EEEEEEEECCEEEEecCCCC-------CCCeEEECCCCEEcCCeeccccccCCCC----
Confidence 3578999999997432 2 34699999999999986421 2458999999999999999999983210
Q ss_pred cCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCc-c-----CHHHHHHHHHHhCCeEEEecccc
Q 011766 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-Q-----HVSEMAKAVELLGLRACLVQSTM 171 (478)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~-~-----~~~~~~~~~~~~g~~~~~~~~~~ 171 (478)
... ..........++++||||+.+++. . ....+....+...-+..+.....
T Consensus 67 --------------------~~~---~e~~~~~~~aa~~gGvTtv~d~~~~~~p~~~~~~~~~~~~~~~~~~s~vd~~~~ 123 (449)
T PRK08044 67 --------------------RSH---WEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQL 123 (449)
T ss_pred --------------------ccc---cccHHHHHHHHHhCCceEEECCccCCCCCCCcHHHHHHHHHHhccCCeeeEEEE
Confidence 000 112233456789999999999862 1 12222222222211111111100
Q ss_pred cCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccc-------cccCCHHHHHHHHHHH
Q 011766 172 DCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQ-------IMNATDRLLLETRDMA 244 (478)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~~~a 244 (478)
. +.. ..... +...+. ..+...++....+.. ........+.+.++.+
T Consensus 124 ~---~~~--------~~~~~------------ei~~l~----~~gv~~fk~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 176 (449)
T PRK08044 124 G---GLV--------SYNLD------------RLHELD----EVGVVGFKCFVATCGDRGIDNDFRDVNDWQFYKGAQKL 176 (449)
T ss_pred e---eeC--------CCCHH------------HHHHHH----HcCceEEEEEecccCcccccCCccCcCHHHHHHHHHHH
Confidence 0 000 00011 222222 223334444332211 1123455677778888
Q ss_pred HHcCCceeEeccCChhhhHHH--hhhcC-------CCCc--------hHHHHhhhCCCCCCeeeeeeccC-ChhHHHHHH
Q 011766 245 REFKTGIHMHVAEIPYENQVV--MDTRK-------VDHG--------TVTFLDKIEFLQNNLLSAHTVWV-NHTEIGLLS 306 (478)
Q Consensus 245 ~~~~~~v~~H~~~~~~~~~~~--~~~~~-------~~~~--------~~~~l~~~~~~~~~~~i~h~~~~-~~~~~~~~~ 306 (478)
.+.|+++.+|+.+..-..... ....+ ...+ ....+......+.+..+.|.+.. +-+.+.+++
T Consensus 177 ~~~~~~v~~H~E~~~l~~~~~~~~~~~G~~~~~~~~~~~P~~~E~~~v~r~~~lA~~~g~~vhi~HiSt~~~~~~i~~ak 256 (449)
T PRK08044 177 GELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHISSPEGVEEVTRAR 256 (449)
T ss_pred HhcCCEEEEecCCHHHHHHHHHHHHhcCCCChhhccccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHH
Confidence 889999999997654321111 00000 0000 01122223333445556666632 224455556
Q ss_pred hcC--CeEEECccchhhc-----------cCCCcH---------HHHHHCCCcEEEcCCCCCCCCCc---CHHHH-----
Q 011766 307 RAG--VKVSHCPASAMRM-----------LGFAPI---------KEMLHADICVSLGTDGAPSNNRM---SIVDE----- 356 (478)
Q Consensus 307 ~~~--~~~~~~p~~~~~~-----------~~~~~~---------~~~~~~gv~v~~gsD~~~~~~~~---~~~~~----- 356 (478)
+.| +.+.+||...... .-.+|+ .+.+..|+..+++|||.|+.... ++++.
T Consensus 257 ~~G~~it~e~~~h~L~l~~~~~~~~~~~~k~~PPlr~~~d~~aL~~~l~~G~id~i~sDH~P~~~~~K~~~~~~~~~g~~ 336 (449)
T PRK08044 257 QEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMEAWGGIA 336 (449)
T ss_pred HCCCCEEEEcChhhhcccHHHhhCCCCcEEEcCCCCChHHHHHHHHHHhCCCceEEEcCCCCCChHHccCChhhCCCCce
Confidence 665 4566777753211 011333 35566899999999998863211 22211
Q ss_pred ---HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhh
Q 011766 357 ---MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITS 433 (478)
Q Consensus 357 ---~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~ 433 (478)
..+..+.... ....+++++++++++|.|||++||+. ++|+|++|++|||+|+|.+..+....++..+.
T Consensus 337 g~e~~l~~~~~~~--------v~~~~l~~~~~v~~~s~npA~~lgl~-~~G~i~~G~~ADlvi~d~~~~~~v~~~~~~s~ 407 (449)
T PRK08044 337 GLQNCMDVMFDEA--------VQKRGMSLPMFGKLMATNAADIFGLQ-QKGRIAPGKDADFVFIQPNSSYVLKNEDLEYR 407 (449)
T ss_pred EHHHHHHHHHHHH--------HHcCCCCHHHHHHHHHHhHHHHhCCC-CCCcCCCCCccCEEEECCCCcEEECHHHcccc
Confidence 1111111110 01236999999999999999999994 46999999999999999974432222221111
Q ss_pred -----hhhccCCCCeeEEEEccEEEEECCeee-cccHHHH
Q 011766 434 -----LVYCMRTENVVSVMCNGQWVMKNKKIL-LLMRGRL 467 (478)
Q Consensus 434 -----~~~~~~~~~v~~v~v~G~~v~~~g~~~-~~~~~~~ 467 (478)
+....-..+|.+||++|++||++++.+ ....|++
T Consensus 408 ~~~sp~~G~~l~G~v~~t~~~G~~v~~~~~~~~~~~~G~~ 447 (449)
T PRK08044 408 HKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQF 447 (449)
T ss_pred CCCCCCCCCEEeeeEEEEEECCEEEEECCccccCCCCccc
Confidence 101111357999999999999998754 3334444
No 74
>cd00375 Urease_alpha Urease alpha-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide. Nickel-dependent ureases are found in bacteria, fungi and plants. Their primary role is to allow the use of external and internally generated urea as a nitrogen source. The enzyme consists of 3 subunits, alpha, beta and gamma, which can be fused and present on a single protein chain and which in turn forms multimers, mainly trimers. The large alpha subunit is the catalytic domain containing an active site with a bi-nickel center complexed by a carbamylated lysine. The beta and gamma subunits play a role in subunit association to form the higher order trimers.
Probab=99.97 E-value=1.7e-28 Score=235.99 Aligned_cols=335 Identities=18% Similarity=0.180 Sum_probs=189.6
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhh-------hhhccCCCeEEeCCCCEEeeccccccccc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL-------QQFSQMADQIIDLQSQILLPGFVNTHVHT 89 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~-------~~~~~~~~~viD~~G~~v~PGfID~H~H~ 89 (478)
..++++|+|++|++.. . +..++|.|+||+|++|++..... ..+...+.++||++|++|+|||||+|+|+
T Consensus 63 ~~~DlVI~Na~IiD~~---g-i~~adI~IkdGrIvaIG~agnp~~~~~v~~~~~~g~~teVIDaeG~iV~PG~ID~HvH~ 138 (567)
T cd00375 63 DVLDLVITNALIIDYT---G-IYKADIGIKDGRIVAIGKAGNPDIMDGVTPNMIVGPSTEVIAGEGKIVTAGGIDTHVHF 138 (567)
T ss_pred ccCCEEEECeEEECCC---C-cEEEEEEEECCEEEEEecCCCccccccccccccCCCCCeEEECCCCEEeeceEECccCC
Confidence 3578999999999642 2 34579999999999999753210 01122356899999999999999999998
Q ss_pred chhhhccccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc------------CHHHHH---
Q 011766 90 SQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ------------HVSEMA--- 154 (478)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~------------~~~~~~--- 154 (478)
.. +. . ...++.+||||+++++.. ..+.+.
T Consensus 139 ~~----------------------------P~--~------~~aAlagGVTTvI~~G~gP~~gtnatp~t~g~~~l~~ml 182 (567)
T cd00375 139 IC----------------------------PQ--Q------IEEALASGITTMIGGGTGPAAGTKATTCTPGPWNIKRML 182 (567)
T ss_pred CC----------------------------cc--H------HHHHHcCCCcEEEcCCcCcccccCCCCCCCCHHHHHHHH
Confidence 21 00 0 245799999999995211 112222
Q ss_pred HHHHHhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCH
Q 011766 155 KAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATD 234 (478)
Q Consensus 155 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (478)
+..+...+.... ... +. . ...+.+.++...+...++ .+..+..++
T Consensus 183 ~aa~~~pin~g~----~gk--g~---------~----------------~~l~eL~e~~~aGA~GfK----~~eD~g~t~ 227 (567)
T cd00375 183 QAADGLPVNIGF----LGK--GN---------G----------------SSPDALAEQIEAGACGLK----LHEDWGATP 227 (567)
T ss_pred HHhhcCCceEEE----Eec--Cc---------c----------------ccHHHHHHHHHcCCEEEE----ecCCCCCCH
Confidence 222222221111 000 00 0 111223333333322222 233345688
Q ss_pred HHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCC----hhHHHHHHhcCC
Q 011766 235 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN----HTEIGLLSRAGV 310 (478)
Q Consensus 235 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~----~~~~~~~~~~~~ 310 (478)
..+.++++.+.++++++.+|+....... +++. ......+......|..... |+.++.+...++
T Consensus 228 ~~i~~aL~~A~~~dv~VaiHadtlne~g------------~~E~-t~aa~~gr~iH~~H~egaggghapdi~~~~~~~nv 294 (567)
T cd00375 228 AAIDTCLSVADEYDVQVAIHTDTLNESG------------FVED-TIAAIKGRTIHTYHTEGAGGGHAPDIIKVAGHPNV 294 (567)
T ss_pred HHHHHHHHHHHhhCCEEEEECCCCCcch------------HHHH-HHHHhcCCeEEEEecCCCCcccchHHHHhcCCCCc
Confidence 8999999999999999999997532111 1111 0011111112222322211 333333333332
Q ss_pred e-EEECcc--------------------ch-------------hhccCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHH
Q 011766 311 K-VSHCPA--------------------SA-------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDE 356 (478)
Q Consensus 311 ~-~~~~p~--------------------~~-------------~~~~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~ 356 (478)
- -++.|+ .+ .|...+..=..|.+.|+..+++||+...+.-......
T Consensus 295 lp~stnpt~p~t~nt~~e~~dm~m~~h~l~~~~~~d~~fa~srir~~ti~ae~~l~d~G~~s~~~sDs~~mgr~ge~~~r 374 (567)
T cd00375 295 LPSSTNPTRPFTVNTLDEHLDMLMVCHHLDPNIPEDVAFAESRIRAETIAAEDVLHDLGAISIMSSDSQAMGRVGEVILR 374 (567)
T ss_pred ccCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhhhhhccchhhccchhhhccCcEEEEccchhhcCccceeeec
Confidence 2 112222 11 0111122233577899999999998644322222211
Q ss_pred -HHHHHHHhcccccccCCCCCCCCCCHHHH---HHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhh
Q 011766 357 -MYLASLINKGREVFANGTTDPAALPAETV---LRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRIT 432 (478)
Q Consensus 357 -~~~~~~~~~~~~~~~~~~~~~~~ls~~~a---l~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~ 432 (478)
.+.+......+... .+ .....+..++ |+++|.|||+++|+++++|+|++||.||||||+.+.+.
T Consensus 375 ~~q~a~k~~~~~g~~-~~--~~~~~~n~r~~~~L~~~Tin~A~alG~~~~vGSLe~GK~ADlVv~d~~~f~--------- 442 (567)
T cd00375 375 TWQTAHKMKAQRGPL-PE--DSGDADNFRVKRYIAKYTINPAIAHGISHEVGSVEVGKLADLVLWEPAFFG--------- 442 (567)
T ss_pred hHHHHHHHHHhcCCC-Cc--ccccCchHHHHHHHHHhhHHHHHHcCcccCceeeCCCCccCEEEEcCcccC---------
Confidence 11222221111111 00 1112455444 99999999999999999999999999999999997442
Q ss_pred hhhhccCCCCeeEEEEccEEEEEC-Cee
Q 011766 433 SLVYCMRTENVVSVMCNGQWVMKN-KKI 459 (478)
Q Consensus 433 ~~~~~~~~~~v~~v~v~G~~v~~~-g~~ 459 (478)
.++..||++|+++|.. |..
T Consensus 443 --------~~p~~vi~~G~iv~~~~gd~ 462 (567)
T cd00375 443 --------VKPEMVLKGGFIAYAQMGDP 462 (567)
T ss_pred --------CCeeEEEECCEEEEecCCCc
Confidence 4678999999999997 543
No 75
>PRK09060 dihydroorotase; Validated
Probab=99.97 E-value=3.9e-28 Score=237.98 Aligned_cols=372 Identities=17% Similarity=0.170 Sum_probs=207.3
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~ 96 (478)
++++++|+|++|+++++ . ..++|+|+||+|++|++... ..+.++||++|++|+|||||+|+|+....
T Consensus 3 ~~~d~~i~~~~v~~~~~---~-~~~~i~i~~g~I~~i~~~~~------~~~~~~iD~~G~~v~PG~ID~HvH~~~~~--- 69 (444)
T PRK09060 3 QTFDLILKGGTVVNPDG---E-GRADIGIRDGRIAAIGDLSG------ASAGEVIDCRGLHVLPGVIDSQVHFREPG--- 69 (444)
T ss_pred CcCcEEEECCEEECCCC---C-eeeEEEEECCEEEEecCCCC------CCCceEEECCCCEEccCEEeccccccCCC---
Confidence 34688999999997542 2 34799999999999986432 12457999999999999999999983210
Q ss_pred ccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC-----HHHHHHHHHHhCCeEEEecccc
Q 011766 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELLGLRACLVQSTM 171 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~ 171 (478)
.... .......+.++.+|||++++++... ...+....+...-...+.....
T Consensus 70 ---------------------~~~~---e~~~t~~~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~a~~~~~~d~~~~ 125 (444)
T PRK09060 70 ---------------------LEHK---EDLETGSRAAVLGGVTAVFEMPNTNPLTTTAEALADKLARARHRMHCDFAFY 125 (444)
T ss_pred ---------------------CCcc---chHHHHHHHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhcccceeeEEEE
Confidence 0001 1223344568999999999975321 2222222222221111111111
Q ss_pred cCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEec--cccccCCHHHHHHHHHHHHHcCC
Q 011766 172 DCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGI--RQIMNATDRLLLETRDMAREFKT 249 (478)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~a~~~~~ 249 (478)
..+. ..... +..++. .+. +...++.+... ..........+.+++ ...+.
T Consensus 126 ~~~~-----------~~~~~------------~l~el~-~~~--gv~g~k~fm~~~~~~~~~~d~~~l~~~~---~~~~~ 176 (444)
T PRK09060 126 VGGT-----------RDNAD------------ELAELE-RLP--GCAGIKVFMGSSTGDLLVEDDEGLRRIL---RNGRR 176 (444)
T ss_pred eccC-----------CCCHH------------HHHHHH-hhc--CceEEEEEeccCCCCcccCCHHHHHHHH---HhCCC
Confidence 0000 00000 222221 111 22223333221 111122344454443 44588
Q ss_pred ceeEeccCChhhhH--HHhhh-c----CCC-Cc-----hH-HHHhhhCCCCCCeeeeeeccCChhHHHHHHhc--CCeEE
Q 011766 250 GIHMHVAEIPYENQ--VVMDT-R----KVD-HG-----TV-TFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRA--GVKVS 313 (478)
Q Consensus 250 ~v~~H~~~~~~~~~--~~~~~-~----~~~-~~-----~~-~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~--~~~~~ 313 (478)
.+.+|+.+...... ..... . ... .. .+ ..+......+.+..+.|.+. .+.++.+++. .+.+.
T Consensus 177 ~v~~H~E~~~l~~~~~~~~~~g~~~~~~~~~p~~aE~~av~~~~~la~~~~~~lhi~h~st--~~~v~~i~~~~~~vt~e 254 (444)
T PRK09060 177 RAAFHSEDEYRLRERKGLRVEGDPSSHPVWRDEEAALLATRRLVRLARETGRRIHVLHVST--AEEIDFLADHKDVATVE 254 (444)
T ss_pred eEEEECCCHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHHHHHHHCCCEEEEeCCC--HHHHHHHHHhCCCeEEE
Confidence 88899865432111 00000 0 000 00 01 12333344455666777774 4555555433 36677
Q ss_pred ECccchhhc------------c---------CCCcHHHHHHCCCcEEEcCCCCCCCCC------------cCHHHHHHHH
Q 011766 314 HCPASAMRM------------L---------GFAPIKEMLHADICVSLGTDGAPSNNR------------MSIVDEMYLA 360 (478)
Q Consensus 314 ~~p~~~~~~------------~---------~~~~~~~~~~~gv~v~~gsD~~~~~~~------------~~~~~~~~~~ 360 (478)
+||.+.... . ....+.+.++.|+..+++||+.++... ..-.+ ....
T Consensus 255 v~ph~l~l~~~~~~~~~~~~~k~~PPlr~~~~~~~l~~al~~G~id~i~sDh~p~~~~~k~~~~~~~~~G~~g~e-~~~~ 333 (444)
T PRK09060 255 VTPHHLTLAAPECYERLGTLAQMNPPIRDARHRDGLWRGVRQGVVDVLGSDHAPHTLEEKAKPYPASPSGMTGVQ-TLVP 333 (444)
T ss_pred eChHHhccCchhhcccCCceEEEeCCCCCHHHHHHHHHHHhCCCccEEecCCCCCCHHHhcCCcccCCCCcccHH-HHHH
Confidence 887532100 0 012344677889999999999876311 00011 1111
Q ss_pred HHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCc--------CChhh
Q 011766 361 SLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPV--------HDRIT 432 (478)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~--------~d~~~ 432 (478)
.+... ..+..+|++++++++|.|||+++|+ +++|+|++|++|||+|+|.+..+..+. .+|+.
T Consensus 334 l~~~~---------v~~g~l~~~~~~~~~s~~pa~~~gl-~~~G~l~~G~~ADlvl~d~~~~~~v~~~~~~s~~~~sp~~ 403 (444)
T PRK09060 334 IMLDH---------VNAGRLSLERFVDLTSAGPARIFGI-AGKGRIAVGYDADFTIVDLKRRETITNEWIASRCGWTPYD 403 (444)
T ss_pred HHHHH---------HHcCCCCHHHHHHHHhHhHHHHhCC-CCCCcccCCCcCCEEEEcCCCCEEEChHHhcccCCCCCCC
Confidence 11110 0122499999999999999999999 457999999999999999874332221 12332
Q ss_pred hhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHH
Q 011766 433 SLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQL 470 (478)
Q Consensus 433 ~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~ 470 (478)
.... ..++.+||++|+++|++|+++....|+.++.
T Consensus 404 g~~l---~g~~~~tiv~G~~v~~~g~~~~~~~G~~~~~ 438 (444)
T PRK09060 404 GKEV---TGWPVGTIVRGQRVMWDGELVGPPTGEPVRF 438 (444)
T ss_pred CCEE---eeeEEEEEECCEEEEECCEEccCCCccCccc
Confidence 2211 2468899999999999999987667777654
No 76
>TIGR01178 ade adenine deaminase. The family described by this model includes an experimentally characterized adenine deaminase of Bacillus subtilis. It also include a member from Methanobacterium thermoautotrophicum, in which adenine deaminase activity has been detected.
Probab=99.97 E-value=9.2e-28 Score=237.99 Aligned_cols=327 Identities=18% Similarity=0.239 Sum_probs=193.0
Q ss_pred eeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccC
Q 011766 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (478)
Q Consensus 20 ~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~ 99 (478)
+++|+|++|+++.+ .....++|+|++|+|++|++.. +.++||++|++|+|||||+|+|+..+.
T Consensus 1 dlli~n~~ivd~~~--~~~~~~dI~I~~g~I~~ig~~~---------~~~viDa~G~~v~PG~ID~H~Hi~~~~------ 63 (552)
T TIGR01178 1 DIVIKNAKIIDVYN--GEIIPGDIAIANGHIAGVGKYN---------GVKVIDALGEYAVPGFIDAHIHIESSM------ 63 (552)
T ss_pred CEEEEeeEEEeCCC--CcEEeeeEEEECCEEEEecCCC---------CCeEEECCCCEEEeCeEecccccCCCC------
Confidence 57899999997543 2345679999999999998631 358999999999999999999994211
Q ss_pred CCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc-----CHH---HHHHHHHHhCCeEEEecccc
Q 011766 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVS---EMAKAVELLGLRACLVQSTM 171 (478)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~-----~~~---~~~~~~~~~g~~~~~~~~~~ 171 (478)
..+ ..+ ...++.+||||+++.+.. ... .+.+......++.+...+.
T Consensus 64 ------------------~~~-~~~------~~~al~~GvTtvv~~P~~~~~v~g~~~~~~~~~~a~~~~~d~~~~~~s- 117 (552)
T TIGR01178 64 ------------------LTP-SEF------AKLVLPHGVTTVVSDPHEIANVNGEDGINFMLNNAKKTPLNFYFMLPS- 117 (552)
T ss_pred ------------------CCh-hHH------HHHHHCCCEEEEEcCCCCCCCCCCHHHHHHHHHHhhcCCcEEEEECCC-
Confidence 111 112 234799999999975322 122 2233333344443222111
Q ss_pred cCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCce
Q 011766 172 DCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGI 251 (478)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v 251 (478)
+..+.+ .+..... +..++.++++++ .+.-.++.+..+......+.+.++.+ +.+++.|..+
T Consensus 118 -~vp~~~----~e~~g~~----------~~~~~i~~~~~~---~~V~glke~m~~~~v~~~d~~~l~~i-~~a~~~g~~I 178 (552)
T TIGR01178 118 -CVPALQ----FETSGAV----------LTAEDIDELMEL---DEVLGLAEVMDYPGVINADIEMLNKI-NSARKRNKVI 178 (552)
T ss_pred -CCCCCc----ccCCCCc----------cCHHHHHHHHcC---CCccEEEEEecchhhcCCCHHHHHHH-HHHHhCCCEE
Confidence 111111 1111111 011133333332 12223443333333333455666655 7889999999
Q ss_pred eEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhccCCCcHHHH
Q 011766 252 HMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEM 331 (478)
Q Consensus 252 ~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 331 (478)
..|+....... ...+...+ ....|+.. +.++...-.+.|..+...-.+..+ ....+..+
T Consensus 179 ~gHap~l~~~e-------------L~~~~~aG-----i~~dHe~~-s~~ea~e~~~~Gm~~~ir~gs~~~--n~~~~~~~ 237 (552)
T TIGR01178 179 DGHCPGLSGKL-------------LNKYISAG-----ISNDHEST-SIEEAREKLRLGMKLMIREGSAAK--NLEALHPL 237 (552)
T ss_pred EecCCCCCHHH-------------HHHHHHcC-----CCCCcCcC-CHHHHHHHHHCCCEEEEeCCcccc--CHHHHHHH
Confidence 99986433211 11122222 23467655 445555556778777654332211 11122222
Q ss_pred H--HCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccC
Q 011766 332 L--HADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAG 409 (478)
Q Consensus 332 ~--~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G 409 (478)
+ ..+.+++++||.. +..+++.+.++........ ..++++++|++++|.|||+++|+++ .|+|++|
T Consensus 238 ~~~~~~~~~~l~TD~~---~~~~~~~~g~l~~~v~~ai---------~~g~~~~~Al~maT~npA~~lgl~~-~G~I~pG 304 (552)
T TIGR01178 238 INEKNCRSLMLCTDDR---HVNDILNEGHINHIVRRAI---------EHGVDPFDALQMASINPAEHFGIDV-GGLIAPG 304 (552)
T ss_pred HhhcCCceEEEEeCCC---ChhHHHhcCCHHHHHHHHH---------HcCCCHHHHHHHHHHHHHHHcCCCC-CcccCCC
Confidence 2 3558999999942 1233444332322221110 1259999999999999999999964 7999999
Q ss_pred ccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEEC-----Ceee
Q 011766 410 KKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN-----KKIL 460 (478)
Q Consensus 410 ~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~-----g~~~ 460 (478)
+.|||++++.. ....+..||++|++|.++ |+.+
T Consensus 305 ~~ADlvvl~~l------------------~~~~v~~v~~~G~~v~~~~~~~~g~~~ 342 (552)
T TIGR01178 305 DPADFVILKDL------------------RNFKVNKTYVKGKLLDLNEVFNDEISR 342 (552)
T ss_pred CcCCEEEECCC------------------CCceEEEEEECCEEEcccccccCCccc
Confidence 99999999952 125899999999999998 7753
No 77
>PRK11170 nagA N-acetylglucosamine-6-phosphate deacetylase; Provisional
Probab=99.96 E-value=8.1e-28 Score=229.14 Aligned_cols=352 Identities=17% Similarity=0.139 Sum_probs=203.3
Q ss_pred eEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCC
Q 011766 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (478)
Q Consensus 21 ~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~ 100 (478)
++|+|++|++++ ..+.+++|+|+||+|++|++..+. + .+.++||++|++|+|||||+|+|.....
T Consensus 2 ~~i~n~~i~~~~---~~~~~~~v~IedgkI~~I~~~~~~----~-~~~~~ID~~G~~l~PG~ID~HvHG~~g~------- 66 (382)
T PRK11170 2 YALTNGRIYTGH---EVLDDHAVVIADGLIEAVCPVAEL----P-PGIEQRDLNGAILSPGFIDLQLNGCGGV------- 66 (382)
T ss_pred EEEEeeEEECCC---CeEeCCEEEEECCEEEEecCCccC----C-CCCeEEeCCCCEEccceeeeeecCccCc-------
Confidence 578999999753 466778999999999999875321 1 2447999999999999999999973310
Q ss_pred CCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCH-HHH---HHHHHH-hCCeEEEecccccCCC
Q 011766 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV-SEM---AKAVEL-LGLRACLVQSTMDCGE 175 (478)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~-~~~---~~~~~~-~g~~~~~~~~~~~~~~ 175 (478)
++ ....... .........+.+++.|||++++...... ... .+.... ..........+...|+
T Consensus 67 -~~---------~~~~~~~---~~~~l~~~~~~~~~~GvTt~lpT~it~~~~~~~~~l~~~~~~~~~~~a~~~G~HlEGP 133 (382)
T PRK11170 67 -QF---------NDTAEAI---SVETLEIMQKANEKSGCTSFLPTLITSSDELMKQAVRVMREYLAKHPNQALGLHLEGP 133 (382)
T ss_pred -cc---------ccCccCC---CHHHHHHHHHHHHhcCEeEEeeeccCCCHHHHHHHHHHHHHHHhcCCCeEEEEEeecC
Confidence 00 0000000 1122233344579999999998653322 211 111111 1111111223344555
Q ss_pred CCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeE-e
Q 011766 176 GLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHM-H 254 (478)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~-H 254 (478)
.+.+...+.+.++.+.+ ...+.++.+.... +.++.+.-.++ . .. . ++++.+.+.|+.+.+ |
T Consensus 134 fi~~~~~Gah~~~~~~~-----------p~~~~~~~~~~~~-~~i~~iTlAPE-~-~~---~-~~i~~l~~~gi~vs~GH 195 (382)
T PRK11170 134 YLNLVKKGTHNPEFIRK-----------PDAEMVDFLCENA-DVITKVTLAPE-M-VD---A-EVIRKLVEAGIVVSAGH 195 (382)
T ss_pred CCCcccCCCCCHHHhcC-----------cCHHHHHHHHhcc-CCEEEEEECCC-C-Cc---H-HHHHHHHHCCcEEEeeC
Confidence 55555444444444331 2344455554443 34554332222 1 12 2 567778888888776 4
Q ss_pred ccCChhhhHHHhhhcCCCCchHHHHhhhCCCCC----------------CeeeeeeccCChhHHHHHHhcCCeEEECccc
Q 011766 255 VAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQN----------------NLLSAHTVWVNHTEIGLLSRAGVKVSHCPAS 318 (478)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----------------~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~ 318 (478)
...+......... .+. ....+.++.+..+.. -.+|..+.|+.|+.++.+.+....-.+..+.
T Consensus 196 s~A~~~~~~~a~~-~Ga-~~~THlfNaM~~~~hR~pg~vga~l~~~~~~~elI~Dg~Hv~p~~~~~~~~~k~~~~~lvtD 273 (382)
T PRK11170 196 SNATYEEAKAGFR-AGI-TFATHLYNAMPYITGREPGLVGAILDEPDVYCGIIADGLHVDYANIRNAKRLKGDKLCLVTD 273 (382)
T ss_pred CcCCHHHHHHHHH-cCC-CEEeeccccCCcccCCCcchhhHhhcCCCcEEEEEcCcccCCHHHHHHHHHhcCCcEEEEec
Confidence 4332222111111 111 011222222222211 1378899999999999887765332233344
Q ss_pred hhhccCCCcHHHHHHCCCcEEE------cCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHH
Q 011766 319 AMRMLGFAPIKEMLHADICVSL------GTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATIN 392 (478)
Q Consensus 319 ~~~~~~~~~~~~~~~~gv~v~~------gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~ 392 (478)
.+...+.++-...+ -|..+.+ -.|+...++..++.+.++.+... .++++++|++++|.|
T Consensus 274 a~~~~G~~~g~y~l-~~~~v~v~~g~~~~~~G~LAGs~l~l~~~v~~l~~~--------------~~~~~~eal~~aT~n 338 (382)
T PRK11170 274 ATAPAGANIEQFIF-AGKTIYYRDGLCVDENGTLSGSALTMIEAVRNLVEH--------------VGIALDEALRMATLY 338 (382)
T ss_pred cccCCCCCCCeEEE-CCEEEEEECCEEECCCCcccccHhHHHHHHHHHHHh--------------cCCCHHHHHHHHHHH
Confidence 44443433222211 1222211 13443444556677777665422 269999999999999
Q ss_pred HHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEE
Q 011766 393 GAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMK 455 (478)
Q Consensus 393 pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~ 455 (478)
||+.+|+++++|+|++|+.|||+|||.+ .++..||++|++++.
T Consensus 339 pA~~lgl~~~~G~i~~G~~ADlvvld~~--------------------~~v~~v~~~G~~~~~ 381 (382)
T PRK11170 339 PARAIGVDKRLGSIEAGKVANLTAFTRD--------------------FKITKTIVNGNEVVT 381 (382)
T ss_pred HHHHhCCCCCccccCCCCcCCEEEECCC--------------------CcEEEEEECCEEeec
Confidence 9999999776899999999999999986 589999999998874
No 78
>TIGR00221 nagA N-acetylglucosamine-6-phosphate deacetylase.
Probab=99.96 E-value=9.2e-28 Score=228.00 Aligned_cols=348 Identities=18% Similarity=0.220 Sum_probs=203.6
Q ss_pred ceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcccc
Q 011766 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (478)
Q Consensus 19 ~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~ 98 (478)
++++|+|++|++++ ....+++|.|+||+|++|++..+.+ ...++||++|++|+|||||+|+|.....
T Consensus 3 ~~~~i~n~~i~~~~---~~~~~~~i~V~dGkI~~I~~~~~~~-----~~~~viD~~G~~i~PGfID~HvHg~~g~----- 69 (380)
T TIGR00221 3 ESYLLKDIAIVTGN---EVIDNGAVGINDGKISTVSTEAELE-----PEIKEIDLPGNVLTPGFIDIHIHGCGGV----- 69 (380)
T ss_pred ceEEEEeeEEECCC---CEEeccEEEEECCEEEEEcccccCC-----CCCeEEECCCCEEccceeeeeeccccCc-----
Confidence 46899999999743 4566789999999999998753221 2457999999999999999999984310
Q ss_pred CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCH-HHH---HHHHHH-h-CCeEEEeccccc
Q 011766 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV-SEM---AKAVEL-L-GLRACLVQSTMD 172 (478)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~-~~~---~~~~~~-~-g~~~~~~~~~~~ 172 (478)
++ ...+ ........+.+++.|||++.+...... ..+ .+.... . ......-..+..
T Consensus 70 ---~~------------~~~~----~e~~~~~~~~~~~~GvTt~l~t~~t~~~~~~~~~l~~~~~~~~~~~~a~~lG~Hl 130 (380)
T TIGR00221 70 ---DT------------NDAS----FETLEIMSERLPKSGCTSFLPTLITQPDENIKQAVKNMREYLAKEKNAQALGLHL 130 (380)
T ss_pred ---CC------------CCCC----HHHHHHHHHHHHhcCeeEEeeeccCCCHHHHHHHHHHHHHHHhccCCceeeeEee
Confidence 00 0011 123334456788999999998653332 211 111111 1 001111223344
Q ss_pred CCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCcee
Q 011766 173 CGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIH 252 (478)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~ 252 (478)
.|+.+.+...+.+.++.+. +...+.++++.+...+.++.++-.++.+ - -.++++.+.+.|+.+.
T Consensus 131 EGPfi~~~~~Gah~~~~i~-----------~p~~~~~~~~~~~~~~~i~~vTlAPE~~-~----~~~~i~~l~~~gi~vs 194 (380)
T TIGR00221 131 EGPFLSPEKKGAHPPEYIR-----------EPDVELFKKFLCEAGGVITKVTLAPEED-Q----HFELIRHLKDAGIIVS 194 (380)
T ss_pred ecCcCChhhcCCCCHHHhh-----------CcCHHHHHHHHHhcCCCEEEEEECCCCC-C----hHHHHHHHHHCCeEEE
Confidence 5555555555544444433 2334445555554446666543222221 1 2355677778888876
Q ss_pred E-eccCChhhhHHHhhhcCCCCchHHHHhhhCCCCC----------------CeeeeeeccCChhHHHHHHhcCC-eEEE
Q 011766 253 M-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQN----------------NLLSAHTVWVNHTEIGLLSRAGV-KVSH 314 (478)
Q Consensus 253 ~-H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----------------~~~i~h~~~~~~~~~~~~~~~~~-~~~~ 314 (478)
+ |...+......... .+. ....+.++.+..+.. -.+|..+.|++++.++.+.+... .-.+
T Consensus 195 ~GHs~A~~~~~~~a~~-~Ga-~~~THlfNaM~~~~hR~pg~vga~l~~~~~~~elI~Dg~Hv~p~~~~~~~r~kg~~~~~ 272 (380)
T TIGR00221 195 AGHTNATYELAKAAFK-AGA-THATHLYNAMSPIHHREPGVIGAVLDHDDVYTEIIADGIHIHPLNIRLAKKLKGDSKLC 272 (380)
T ss_pred eeCCCCCHHHHHHHHH-cCC-CeeeeeccCCCCcCCCCCcHHHHHhcCCCcEEEEEcCCCcCCHHHHHHHHHhcCCCcEE
Confidence 4 55443222211111 010 011122222222211 13778899999999998877653 2223
Q ss_pred CccchhhccCCCcHHHHHHCCCcEE------EcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHH
Q 011766 315 CPASAMRMLGFAPIKEMLHADICVS------LGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 388 (478)
Q Consensus 315 ~p~~~~~~~~~~~~~~~~~~gv~v~------~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~ 388 (478)
..+..++..+.++-...+ -|..+. .-.|+...+...++.+.++..... .++++++++++
T Consensus 273 lvtDa~~~~g~~~G~y~l-~~~~v~~~~g~~~~~~g~LAGs~ltl~~~v~~l~~~--------------~~~~~~eal~~ 337 (380)
T TIGR00221 273 LVTDSMAAAGAKDGVFIF-GGKTVYIREGTCLDSNGTLAGSSLTMIEGARNLVEF--------------TNISLTDAARM 337 (380)
T ss_pred EEeccccccCCCCceEeE-CCEEEEEECCEEEcCCCceechhhhHHHHHHHHHHh--------------hCCCHHHHHHH
Confidence 333444443433322111 122221 113443344456677776654321 25999999999
Q ss_pred HhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccE
Q 011766 389 ATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQ 451 (478)
Q Consensus 389 ~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~ 451 (478)
+|.|||+.+|+++++|+|++|+.|||+++|.+ ..+..||++|+
T Consensus 338 aT~npA~~lgl~~~~G~i~~G~~ADlvv~d~~--------------------~~v~~t~~~G~ 380 (380)
T TIGR00221 338 SSLNPARALGIDDRLGSVTVGKDANLVVFTPD--------------------FEVILTIVNGN 380 (380)
T ss_pred HhHHHHHHhCCCCCCcccCCCCcCCEEEECCC--------------------CCEEEEEeCCC
Confidence 99999999999776899999999999999986 58999999995
No 79
>COG1001 AdeC Adenine deaminase [Nucleotide transport and metabolism]
Probab=99.96 E-value=2.1e-27 Score=225.61 Aligned_cols=334 Identities=20% Similarity=0.294 Sum_probs=203.6
Q ss_pred CccceeEEEecEEEeeCCCCceeecceEEEECCEEEEE-cCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhh
Q 011766 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAI-GQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA 94 (478)
Q Consensus 16 ~~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~i-g~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~ 94 (478)
....+++++||+|++.- .+.+..++|+|.+|+|+.| ++.. .++.++||+.|+||.|||||.|.|+
T Consensus 21 ~~~adlv~~ng~ivdv~--~gei~~~dIaI~~grI~~v~~~~~-------~e~~~~iDa~g~yivPGfID~H~HI----- 86 (584)
T COG1001 21 RAKADLVLKNGRIVDVV--TGEIYKGDIAIAGGRIVGVIGEYR-------AEATEVIDAAGRYIVPGFIDAHLHI----- 86 (584)
T ss_pred CCCCCEEEECCEEEEee--eccEEeeeEEEECCEEEEeecCcC-------cccceeecCCCCEeccceeecceec-----
Confidence 45679999999999765 3445678999999999995 4432 2467999999999999999999999
Q ss_pred ccccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeec-C-------CccCHHHHHHHHHHhCCeEEE
Q 011766 95 KGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAE-A-------GGQHVSEMAKAVELLGLRACL 166 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~-~-------~~~~~~~~~~~~~~~g~~~~~ 166 (478)
++++..+..|... .+.+|+||++. . |.....-+.+.++...++.+.
T Consensus 87 --------------------ESSm~tP~~FA~~------Vlp~GtTtvV~DPHEIaNV~G~~Gi~~ml~~a~~~pl~~~~ 140 (584)
T COG1001 87 --------------------ESSMLTPSEFARA------VLPHGTTTVVSDPHEIANVLGEDGIRFMLDEAKETPLKVYV 140 (584)
T ss_pred --------------------cccccCHHHHHHH------hhccCceEEeeCcHHHHhhccHHHHHHHHHHHhhCCeEEEE
Confidence 4455445555444 78999999874 2 222233455666667777765
Q ss_pred ecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHH
Q 011766 167 VQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMARE 246 (478)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~ 246 (478)
..+..-.. .+ .+..... +..+..++++.+-.-.+ +.-+..+++.-.-+++.+ ..++.+++
T Consensus 141 ~~pScVPa--t~----~Et~Ga~----------l~a~~i~e~~~~p~Vig---l~E~Mn~pgVi~~D~~~l-~kl~a~~~ 200 (584)
T COG1001 141 MLPSCVPA--TP----FETSGAE----------LTAEDIKELLEHPEVIG---LGEMMNFPGVIEGDPDML-AKLEAARK 200 (584)
T ss_pred ecccCccC--Cc----cccCCce----------ecHHHHHHHhhCCCccc---hhhhcCCchhccCCHHHH-HHHHHHHH
Confidence 43222111 10 0111111 11223334333311111 111133344444455555 45688999
Q ss_pred cCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhccCCC
Q 011766 247 FKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFA 326 (478)
Q Consensus 247 ~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 326 (478)
.|.++.-|+...... ....+...+... .|-....+|.+++ .+.|..+.+--.+..+. -..
T Consensus 201 ~~k~VdGHapgl~g~-------------~Ln~Y~aaGi~t-----DHE~~t~EEa~~k-lr~Gm~i~iReGS~a~d-l~~ 260 (584)
T COG1001 201 AGKPVDGHAPGLSGK-------------ELNAYIAAGIST-----DHESTTAEEALEK-LRLGMKIMIREGSAAKD-LAA 260 (584)
T ss_pred cCCeecccCCCCChH-------------HHHHHHhcCCCc-----CcccCCHHHHHHH-HhCCcEEEEEcCchhhh-HHH
Confidence 999999999775421 112222333222 3444433444454 56777665432222110 011
Q ss_pred cHHHHHHCC-CcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccc
Q 011766 327 PIKEMLHAD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGS 405 (478)
Q Consensus 327 ~~~~~~~~g-v~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~ 405 (478)
.++.+-+.| -.++++||.... .++..+-.+..++.. + .++|+++.+|++|+|.|||+.+|+++ +|.
T Consensus 261 l~~~i~e~~~~~~~lcTDD~~p---~dl~~eGhld~~vR~---A------i~~Gv~p~~a~qmAtiN~A~~~gl~~-~G~ 327 (584)
T COG1001 261 LLPAITELGSRRVMLCTDDRHP---DDLLEEGHLDRLVRR---A------IEEGVDPLDAYQMATINPAEHYGLDD-LGL 327 (584)
T ss_pred HHHHHhhcCCceEEEECCCCCh---hHhhhcCCHHHHHHH---H------HHcCCCHHHHHHHHhcCHHHHcCCcc-ccc
Confidence 223333445 468999997432 122222222221111 1 13479999999999999999999965 899
Q ss_pred cccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeee
Q 011766 406 LEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKIL 460 (478)
Q Consensus 406 l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~ 460 (478)
|+||+.||||+++.- ++.++..|+++|++|.++|+.+
T Consensus 328 iAPG~~ADlvi~~DL------------------~~~~v~~V~~~G~~v~~~g~~l 364 (584)
T COG1001 328 IAPGRRADLVILEDL------------------RNFKVTSVLIKGRVVAEDGKAL 364 (584)
T ss_pred ccCCccccEEEEccc------------------ccCceeEEEECCEEEecCCcee
Confidence 999999999999862 3479999999999999999743
No 80
>cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid. Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides.
Probab=99.96 E-value=8.8e-27 Score=226.43 Aligned_cols=340 Identities=21% Similarity=0.277 Sum_probs=196.2
Q ss_pred eEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCC
Q 011766 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (478)
Q Consensus 21 ~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~ 100 (478)
++|+|++|++++. ..+++|+|+||+|++|++..+.+ ...+.++||++|++|+|||||+|+|+......
T Consensus 2 ~~i~~~~v~~~~~----~~~~~v~i~~g~I~~v~~~~~~~---~~~~~~~id~~g~~v~PG~id~H~H~~~~~~~----- 69 (387)
T cd01308 2 TLIKNAEVYAPEY----LGKKDILIAGGKILAIEDQLNLP---GYENVTVVDLHGKILVPGFIDQHVHIIGGGGE----- 69 (387)
T ss_pred EEEECcEEeCCCC----ccceEEEEECCEEEEEeCCcccc---cCCCCeEEECCCCEEccCeeehhhCcccccCC-----
Confidence 5799999997532 35789999999999999764321 11356899999999999999999999531000
Q ss_pred CCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCc-----cCHH---HHHHHHHHhCCeEEEeccccc
Q 011766 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QHVS---EMAKAVELLGLRACLVQSTMD 172 (478)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~-----~~~~---~~~~~~~~~g~~~~~~~~~~~ 172 (478)
.. ....+.+ ....+++++|+||++++.. .... ...+.+...|++.+.....+.
T Consensus 70 ~~------------~~~~~~~-------~~~~~~~~~G~tt~~d~~~~~~~~~~~~~~~~~~~~~~~~Gv~~v~~~~~~~ 130 (387)
T cd01308 70 GG------------PSTRTPE-------VTLSDLTTAGVTTVVGCLGTDGISRSMEDLLAKARALEEEGITCFVYTGSYE 130 (387)
T ss_pred Cc------------ccccCHH-------HHHHHHHhCCceEEecCcCCCCCCCCHHHHHHHHHHHHHhCCEEEEEecccC
Confidence 00 0001111 2345679999999999762 1122 334455678999886544332
Q ss_pred CCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCC---
Q 011766 173 CGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT--- 249 (478)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~--- 249 (478)
.. . ....+... .....++.+.. .+.. ............+.+.++.+.++..+.
T Consensus 131 ~~----~----~~~~~~~~------------~~~~~i~~~~~--~g~~--~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 186 (387)
T cd01308 131 VP----T----RTITGSIR------------KDLLLIDKVIG--VGEI--AISDHRSSQPTVEELARIAAEARVGGLLGG 186 (387)
T ss_pred CC----C----cCchhhHH------------HHHHHHHHhcC--cceE--EEcCCCCCCCCHHHHHHHHHHHHHHHHhcC
Confidence 11 0 00000000 11122344322 1111 112222223455566666666665332
Q ss_pred ---ceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhH---HHHHHhcCCeEEECccchhh--
Q 011766 250 ---GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE---IGLLSRAGVKVSHCPASAMR-- 321 (478)
Q Consensus 250 ---~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~---~~~~~~~~~~~~~~p~~~~~-- 321 (478)
.+++|........+. ..+++...+.--.+.+..|... +.+. .....+.|..+.+.-.....
T Consensus 187 ~~~~~~vh~~~~~~~~~~----------i~~~~~~~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~G~~v~i~~~~~~~~~ 255 (387)
T cd01308 187 KAGIVHIHLGDGKRALSP----------IFELIEETEIPITQFLPTHINR-TAPLFEQGVEFAKMGGTIDLTSSIDPQFR 255 (387)
T ss_pred CCcEEEEEeCCchHHHHH----------HHHHHHhcCCCcceeECCcccC-CHHHHHHHHHHHHcCCcEEEECCCCcccc
Confidence 367777654322221 1123333232111344444443 4332 33344556544433221111
Q ss_pred c----cCCCcHHHHHHCCC---cEEEcCCCCCC---CCC------------cCHHHHHHHHHHHhcccccccCCCCCCCC
Q 011766 322 M----LGFAPIKEMLHADI---CVSLGTDGAPS---NNR------------MSIVDEMYLASLINKGREVFANGTTDPAA 379 (478)
Q Consensus 322 ~----~~~~~~~~~~~~gv---~v~~gsD~~~~---~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (478)
. .....++.+++.|+ +++++||+... ... ..++..+... + ...+
T Consensus 256 ~~~~~~~~~~l~~~~~~g~~~d~i~l~TD~~~~~p~~~~~g~~~~~g~~~~~~~~~~~~~~--v------------~~~~ 321 (387)
T cd01308 256 KEGEVRPSEALKRLLEQGVPLERITFSSDGNGSLPKFDENGNLVGLGVGSVDTLLREVREA--V------------KCGD 321 (387)
T ss_pred ccCccChHHHHHHHHHhCCCCCcEEEEECCCCCcccCccCCeEEecCcCcHHHHHHHHHHH--H------------HhCC
Confidence 1 12245567888886 47999997311 000 0111222211 1 1235
Q ss_pred CCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCee
Q 011766 380 LPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKI 459 (478)
Q Consensus 380 ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~ 459 (478)
+|++++++++|.|||+++|+++ +|+|++|++|||+|+|.+ ..+..|+++|++|+++|++
T Consensus 322 i~~~~al~~~T~npA~~lg~~~-~G~i~~G~~ADlvv~d~~--------------------~~~~~~~~~G~~v~~~~~~ 380 (387)
T cd01308 322 IPLEVALRVITSNVARILKLRK-KGEIQPGFDADLVILDKD--------------------LDINSVIAKGQIMVRNGKL 380 (387)
T ss_pred CCHHHHHHHHHHHHHHHhCCCC-CCCcCCCCcCCEEEEcCC--------------------CCEEEEEECCEEEEECCeE
Confidence 9999999999999999999965 799999999999999986 4789999999999999998
Q ss_pred ec
Q 011766 460 LL 461 (478)
Q Consensus 460 ~~ 461 (478)
+.
T Consensus 381 ~~ 382 (387)
T cd01308 381 LV 382 (387)
T ss_pred ee
Confidence 64
No 81
>PRK09059 dihydroorotase; Validated
Probab=99.96 E-value=7.1e-27 Score=227.30 Aligned_cols=361 Identities=14% Similarity=0.116 Sum_probs=201.4
Q ss_pred cceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccc
Q 011766 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~ 97 (478)
+.+++|+|++|+++++ ....+++|+|+||+|++|++..... ..+ .+.++||++|++|+|||||+|+|+....
T Consensus 2 ~~~~~i~n~~v~~~~~--~~~~~~~v~I~~G~I~~i~~~~~~~-~~~-~~~~viDa~G~~v~PG~ID~HvH~~~~~---- 73 (429)
T PRK09059 2 MRPILLANARIIDPSR--GLDEIGTVLIEDGVIVAAGKGAGNQ-GAP-EGAEIVDCAGKAVAPGLVDARVFVGEPG---- 73 (429)
T ss_pred CcCEEEEeeEEECCCC--CcccceEEEEECCEEEEecCccccc-cCC-CCCeEEECCCCEEeccEEecccccCCCC----
Confidence 4568999999997543 3335689999999999998643110 011 2458999999999999999999983210
Q ss_pred cCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC-----HHHHHHHHHHh----CCeEEEec
Q 011766 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELL----GLRACLVQ 168 (478)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~-----~~~~~~~~~~~----g~~~~~~~ 168 (478)
. ..........+.++.+|||++.+++... ...+....... .+......
T Consensus 74 --------------------~---~~~e~~~~~s~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~ 130 (429)
T PRK09059 74 --------------------A---EHRETIASASRAAAAGGVTSIIMMPDTDPVIDDVALVEFVKRTARDTAIVNIHPAA 130 (429)
T ss_pred --------------------c---hhhhhHHHHHHHHHhCCcEEEEeccCCCCCCCCHHHHHHHHHHhcccCcccEEEEe
Confidence 0 1112223345678999999999976432 11121111111 12221111
Q ss_pred ccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcC
Q 011766 169 STMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK 248 (478)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~ 248 (478)
.+..+ ... +....+..+...+ +..+.. ......+...+.++++.+++.|
T Consensus 131 -~~~~~----------~~~----------------~~l~e~~~l~~~G---v~~f~~-~~~~~~~~~~l~~~~~~~~~~~ 179 (429)
T PRK09059 131 -AITKG----------LAG----------------EEMTEFGLLRAAG---AVAFTD-GRRSVANTQVMRRALTYARDFD 179 (429)
T ss_pred -EEecC----------CCC----------------cchHHHHHHHhcC---cEEEec-CCcccCCHHHHHHHHHHHHhcC
Confidence 00000 000 1111122222221 211111 1112235566888899999999
Q ss_pred CceeEeccCChhhh-----HH-HhhhcCCCCc--h-----H-HHHhhhCCCCCCeeeeeeccCC-hhHHHHHHhcC--Ce
Q 011766 249 TGIHMHVAEIPYEN-----QV-VMDTRKVDHG--T-----V-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG--VK 311 (478)
Q Consensus 249 ~~v~~H~~~~~~~~-----~~-~~~~~~~~~~--~-----~-~~l~~~~~~~~~~~i~h~~~~~-~~~~~~~~~~~--~~ 311 (478)
.++.+|+.+..... +. .....+...+ . + ..+......+.+..+.|.+.-. -+.++++++.| +.
T Consensus 180 ~~v~~H~E~~~l~~~~~~~~~~~~~~~~~~~rP~~aE~~av~r~~~la~~~~~~~hi~hvs~~~~~~~i~~ak~~g~~vt 259 (429)
T PRK09059 180 AVIVHETRDPDLGGNGVMNEGLFASWLGLSGIPREAEVIPLERDLRLAALTRGRYHAAQISCAESAEALRRAKDRGLKVT 259 (429)
T ss_pred CEEEEecCChhhhcCCCcCCcHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEEecCCHHHHHHHHHHHHCCCCEE
Confidence 99999986643211 00 0000000000 0 1 1222223334556666655421 23445555566 55
Q ss_pred EEECccchhhc-----------cCCCcHH---------HHHHCCCcEEEcCCCCCCCCCc---CHH---------HHHHH
Q 011766 312 VSHCPASAMRM-----------LGFAPIK---------EMLHADICVSLGTDGAPSNNRM---SIV---------DEMYL 359 (478)
Q Consensus 312 ~~~~p~~~~~~-----------~~~~~~~---------~~~~~gv~v~~gsD~~~~~~~~---~~~---------~~~~~ 359 (478)
+.+||.+.... .-.+|+| +.+..|...+++||+.++.... +++ +.+-.
T Consensus 260 ~ev~phhL~l~~~~~~~~~~~~kvnPPLR~~~d~~~L~~~l~~g~id~i~sDh~p~~~~~K~~~~~~~~~G~~gle~~l~ 339 (429)
T PRK09059 260 AGVSINHLSLNENDIGEYRTFFKLSPPLRTEDDRVAMVEAVASGTIDIIVSSHDPQDVDTKRLPFSEAAAGAIGLETLLA 339 (429)
T ss_pred EeecHHHHhccHHHHhccCCccEEcCCCCCHHHHHHHHHHHHcCCCcEEEeCCCCCCHHHCcCChhhCCCCcccHHHHHH
Confidence 67888743211 1123333 5667788999999998763111 111 11111
Q ss_pred HHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCC--------hh
Q 011766 360 ASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHD--------RI 431 (478)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d--------~~ 431 (478)
.+... ....+++++++++++|.|||+++|+ + .|+|++|++||||++|.+.-+....++ |+
T Consensus 340 -~~~~~---------v~~~~l~l~~~~~~~s~nPA~~~gl-~-~G~l~~G~~ADlvl~d~~~~~~v~~~~~~s~~~~sPf 407 (429)
T PRK09059 340 -AALRL---------YHNGEVPLLRLIEALSTRPAEIFGL-P-AGTLKPGAPADIIVIDLDEPWVVDPEDLKSRSKNTPF 407 (429)
T ss_pred -HHHHH---------HHcCCCCHHHHHHHHhHHHHHHhCC-C-cCcccCCCcCCEEEECCCCCEEECcccCccCCCCCCC
Confidence 11110 0123589999999999999999999 3 599999999999999987543332222 33
Q ss_pred hhhhhccCCCCeeEEEEccEEEEE
Q 011766 432 TSLVYCMRTENVVSVMCNGQWVMK 455 (478)
Q Consensus 432 ~~~~~~~~~~~v~~v~v~G~~v~~ 455 (478)
... .-..+|..||++|++||+
T Consensus 408 ~G~---~l~G~v~~ti~~G~~v~~ 428 (429)
T PRK09059 408 EEA---RFQGRVVRTIVAGKTVYE 428 (429)
T ss_pred CCC---EEeeEEEEEEECCEEEee
Confidence 221 123689999999999985
No 82
>TIGR03121 one_C_dehyd_A formylmethanofuran dehydrogenase subunit A. Members of this largely archaeal protein family are subunit A of the formylmethanofuran dehydrogenase. Nomenclature in some bacteria may reflect inclusion of the formyltransferase described by TIGR03119 as part of the complex, and therefore call this protein formyltransferase/hydrolase complex Fhc subunit A. Note that this model does not distinguish tungsten (FwdA) from molybdenum-containing (FmdA) forms of this enzyme; a single gene from this family is expressed constitutively in Methanobacterium thermoautotrophicum, which has both tungsten and molybdenum forms and may work interchangeably.
Probab=99.96 E-value=1.2e-26 Score=224.20 Aligned_cols=85 Identities=20% Similarity=0.170 Sum_probs=66.2
Q ss_pred CCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEEC
Q 011766 377 PAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN 456 (478)
Q Consensus 377 ~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~ 456 (478)
+..+|++|+++++|.+||++||+.+ +|+|++|++|||+|+|.++....+ +...+.. ....+.+||++|++|+++
T Consensus 427 ~Re~sL~EI~~mtTanPAkaLGL~d-kG~L~pGa~ADIaI~D~~~~~~~~---~~~~v~~--~~~~v~~Tik~G~vV~~d 500 (556)
T TIGR03121 427 DREYSLYEIAIMTRAGPAKLLGLTD-RGHLGVGADADIAVYDINPDDVDT---DYADVEK--AFSTALYVFKDGEIVVKD 500 (556)
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCC-CCCcCCCCcCCEEEEeCcccccCC---chHHHhh--ccCCccEEEECCEEEEEC
Confidence 4469999999999999999999964 699999999999999986433221 1222211 125799999999999999
Q ss_pred CeeecccHHHH
Q 011766 457 KKILLLMRGRL 467 (478)
Q Consensus 457 g~~~~~~~~~~ 467 (478)
|+++....|+.
T Consensus 501 Gei~~~~~G~~ 511 (556)
T TIGR03121 501 GEIVETPWGRT 511 (556)
T ss_pred CEEccCCCCcE
Confidence 99987665543
No 83
>PRK08417 dihydroorotase; Provisional
Probab=99.96 E-value=5e-27 Score=226.15 Aligned_cols=330 Identities=14% Similarity=0.154 Sum_probs=190.4
Q ss_pred EEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCCCCchHHhhhccccccCCCChHH
Q 011766 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEED 122 (478)
Q Consensus 43 v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (478)
|+|+||||++|++.. .+.++||++|++|+|||||+|+|+.. +.+.
T Consensus 1 i~I~dG~I~~i~~~~--------~~~~viDa~g~~vlPG~ID~HvH~~~------------------------~~~~--- 45 (386)
T PRK08417 1 IRIKDGKITEIGSDL--------KGEEILDAKGKTLLPALVDLNVSLKN------------------------DSLS--- 45 (386)
T ss_pred CEEECCEEEEecCCC--------CCCeEEECCCCEEccCeeEEeeeeCC------------------------CCcC---
Confidence 589999999998642 24689999999999999999999832 0111
Q ss_pred HHHHHHHHHHHHHhcCcceeecCCccCH-----HHHHHHHHHhCC--eEEEecccccCCCCCCCcccccCCcccCCCCCC
Q 011766 123 SYISTLLCGIELIHSGVTCFAEAGGQHV-----SEMAKAVELLGL--RACLVQSTMDCGEGLPASWAVRTTDDCIQPDSS 195 (478)
Q Consensus 123 ~~~~~~~~~~~~l~~GvTtv~~~~~~~~-----~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (478)
........+.++++||||+++++...+ .......+..+- ..+...... . ...
T Consensus 46 -~e~~~t~s~aA~aGGvTtv~dmpnt~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~-~~~-------- 104 (386)
T PRK08417 46 -SKNLKSLENECLKGGVGSIVLYPDSTPAIDNEIALELINSAQRELPMQIFPSIRA-----------L-DED-------- 104 (386)
T ss_pred -hhhHHHHHHHHHcCCcEEEEeCCCCCCCCCCHHHHHHHHHHhhccCCcEEEEEEE-----------E-CCC--------
Confidence 122244567789999999999874321 122111121111 111110000 0 000
Q ss_pred ccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhh------hc
Q 011766 196 ISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD------TR 269 (478)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~------~~ 269 (478)
...+.+..+...+...++ . ....+.+.+.++++.+++.|+++.+|+.+.......... ..
T Consensus 105 --------~~~~~i~~l~~~Gv~~~k--~----~~~~~~~~l~~~~~~a~~~g~~V~~HaEd~~~~~~~~~~~g~~~~~~ 170 (386)
T PRK08417 105 --------GKLSNIATLLKKGAKALE--L----SSDLDANLLKVIAQYAKMLDVPIFCRCEDSSFDDSGVMNDGELSFEL 170 (386)
T ss_pred --------ccHHHHHHHHHCCCEEEE--C----CCCCCHHHHHHHHHHHHHcCCEEEEeCCCHHHhhHHHHhcChhhHHh
Confidence 112223333333322222 1 114577889999999999999999999774322111100 00
Q ss_pred CCCCc--------hHHHHhhhCCCCCCeeeeeeccCC-hhHHHHHHhcC--CeEEECccchhhc-----------cCCCc
Q 011766 270 KVDHG--------TVTFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG--VKVSHCPASAMRM-----------LGFAP 327 (478)
Q Consensus 270 ~~~~~--------~~~~l~~~~~~~~~~~i~h~~~~~-~~~~~~~~~~~--~~~~~~p~~~~~~-----------~~~~~ 327 (478)
....+ ....+......+.+..+.|.+.-. -+.++.+++.| +...+||.+.... .-.+|
T Consensus 171 ~~~~rp~~aE~~~v~~~~~la~~~~~~lhi~hvS~~~~~~~i~~ak~~g~~vt~ev~ph~L~l~~~~~~~~~~~~k~~PP 250 (386)
T PRK08417 171 GLPGIPSIAETKEVAKMKELAKFYKNKVLFDTLALPRSLELLDKFKSEGEKLLKEVSIHHLILDDSACENFNTAAKLNPP 250 (386)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCCEEEEechHHHeeCHHHhcCcCcccEECCC
Confidence 00000 011233333445566666666421 12344445555 5568888753211 11223
Q ss_pred HH---------HHHHCCCcEEEcCCCCCCCCCc---CHHH--------HHHHHHHHhcccccccCCCCCCCCCCHHHHHH
Q 011766 328 IK---------EMLHADICVSLGTDGAPSNNRM---SIVD--------EMYLASLINKGREVFANGTTDPAALPAETVLR 387 (478)
Q Consensus 328 ~~---------~~~~~gv~v~~gsD~~~~~~~~---~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~ 387 (478)
+| +.+..|...+++|||.|+.... +++. +.....+... .....+++++++++
T Consensus 251 lR~~~d~~~L~~~l~~g~Id~i~SDHaP~~~~~K~~~~~~a~~G~~g~e~~~~~~~~~--------~v~~~~~~~~~~~~ 322 (386)
T PRK08417 251 LRSKEDRLALLEALKEGKIDFLTSLHSAKSNSKKDLAFDEAAFGIDSICEYFSLCYTY--------LVKEGIITWSELSR 322 (386)
T ss_pred CCCHHHHHHHHHHHhcCCceEEEcCCCCCCHHHccCCHhHCCCCchHHHHHHHHHHHH--------HHhcCCCCHHHHHH
Confidence 33 5677899999999998873111 1121 1111111110 01123589999999
Q ss_pred HHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCC-cCChhhhhhhccCCCCeeEEEEccEEEEE
Q 011766 388 MATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP-VHDRITSLVYCMRTENVVSVMCNGQWVMK 455 (478)
Q Consensus 388 ~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~-~~d~~~~~~~~~~~~~v~~v~v~G~~v~~ 455 (478)
++|.|||++||+. + |+|++|++|||+++|.+..+..+ ..+|+..... ..+|..||++|++||+
T Consensus 323 ~~t~~pA~~lgl~-~-G~l~~G~~ADlvi~d~~~~~~~~~~~~p~~g~~~---~g~v~~tiv~G~~v~~ 386 (386)
T PRK08417 323 FTSYNPAQFLGLN-S-GEIEVGKEADLVLFDPNESTIIDDNFSLYSGDEL---YGKIEAVIIKGKLYLE 386 (386)
T ss_pred HHHHHHHHHhCCC-C-CccCCCCcCCEEEEcCCCCeEeCCCCCCccCCEE---eccEEEEEECCEEEeC
Confidence 9999999999994 4 99999999999999998544333 2345443222 2579999999999974
No 84
>cd00854 NagA N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.
Probab=99.96 E-value=3.9e-27 Score=226.12 Aligned_cols=339 Identities=25% Similarity=0.247 Sum_probs=197.0
Q ss_pred eEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCC
Q 011766 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (478)
Q Consensus 21 ~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~ 100 (478)
++|+|++|+++ ....+++|+|++|+|+.|++..+.+ ...++||++|++|+|||||+|+|.....
T Consensus 1 ~~i~~~~v~~~----~~~~~~~i~i~~g~I~~i~~~~~~~-----~~~~vid~~g~~l~PG~iD~H~H~~~g~------- 64 (374)
T cd00854 1 LIIKNARILTP----GGLEDGAVLVEDGKIVAIGPEDELE-----EADEIIDLKGQYLVPGFIDIHIHGGGGA------- 64 (374)
T ss_pred CEEEeEEEeCC----CEEcccEEEEECCEEEEecCCCCcc-----cCCcEEECCCCEecccEEEeeecccCCC-------
Confidence 47999999953 3557789999999999998754321 2358999999999999999999984210
Q ss_pred CCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCH-HHH-------HHHHHHh-CCeEEEecccc
Q 011766 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV-SEM-------AKAVELL-GLRACLVQSTM 171 (478)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~-~~~-------~~~~~~~-g~~~~~~~~~~ 171 (478)
++ . ... ........+.++++|||+++++..... ... .+..+.. |.+.+ + ..
T Consensus 65 -~~-----------~-~~~----~e~~~~~~~~~~~~GvTtv~~t~~t~~~~~~~~~l~~~~~~~~~~~g~~~~-g--~h 124 (374)
T cd00854 65 -DF-----------M-DGT----AEALKTIAEALAKHGTTSFLPTTVTAPPEEIAKALAAIAEAIAEGQGAEIL-G--IH 124 (374)
T ss_pred -CC-----------C-CCC----HHHHHHHHHHHHccCcceeeccccCCCHHHHHHHHHHHHHHhhcCCCCeeE-E--Ee
Confidence 00 0 011 122233456789999999999763222 211 1111111 22221 1 12
Q ss_pred cCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHH--HHHHHHHHHcCC
Q 011766 172 DCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLL--LETRDMAREFKT 249 (478)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~a~~~~~ 249 (478)
..|+.+..........+... ....+.++++.....+.++++ +..+|.. .++++.++++|+
T Consensus 125 leGP~~~~~~~g~h~~~~~~-----------~~~~~~~~~~~~~~~~~ik~~-------tlaPE~~~~~~~i~~~~~~gi 186 (374)
T cd00854 125 LEGPFISPEKKGAHPPEYLR-----------APDPEELKKWLEAAGGLIKLV-------TLAPELDGALELIRYLVERGI 186 (374)
T ss_pred eecCccCcccCCCCCHHHcC-----------CcCHHHHHHHHHhcCCCEEEE-------EECCCCCChHHHHHHHHHCCe
Confidence 23333322211111111111 012233444444444667765 2344444 678899999999
Q ss_pred cee-EeccCChhh-hHH-HhhhcCCCC----------c---hHH-HHhhhCCCCCCeeeeeeccCChhHHHHHHhcC--C
Q 011766 250 GIH-MHVAEIPYE-NQV-VMDTRKVDH----------G---TVT-FLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAG--V 310 (478)
Q Consensus 250 ~v~-~H~~~~~~~-~~~-~~~~~~~~~----------~---~~~-~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~--~ 310 (478)
.+. -|....... .+. ........| + ... .+..-.. .-.+|.|+.|++++.++.+.+.. -
T Consensus 187 ~v~~GH~~a~~~~~~~a~~~G~~~~tH~~n~m~~~~~r~~~~~~a~l~~~~~--~~~li~dg~Hv~~~~~~~~~r~~g~~ 264 (374)
T cd00854 187 IVSIGHSDATYEQAVAAFEAGATHVTHLFNAMSPLHHREPGVVGAALSDDDV--YAELIADGIHVHPAAVRLAYRAKGAD 264 (374)
T ss_pred EEEeeCCcCCHHHHHHHHHcCCCeeeECCCCCCCcCCCCCcHHHHhhcCCCC--eEEEEcCCCcCCHHHHHHHHHhcCCC
Confidence 995 787644211 111 111111111 1 111 1111000 01278899999999999999885 3
Q ss_pred eEEECccchhhc---cCCCcHHHH--HHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHH
Q 011766 311 KVSHCPASAMRM---LGFAPIKEM--LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETV 385 (478)
Q Consensus 311 ~~~~~p~~~~~~---~~~~~~~~~--~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~a 385 (478)
.+..++..+... .+.+++... ...+-.+.+.++. ..++..++.+.++..... .++|++++
T Consensus 265 ~~~lvtD~~~~~G~~~g~y~~~~~~~~~~~~~~~~~~g~-laG~~~~l~~~~~~l~~~--------------~~l~~~~a 329 (374)
T cd00854 265 KIVLVTDAMAAAGLPDGEYELGGQTVTVKDGVARLADGT-LAGSTLTMDQAVRNMVKW--------------GGCPLEEA 329 (374)
T ss_pred cEEEEeccccccCCCCCeEEECCEEEEEECCEEEcCCCC-eeehHhhHHHHHHHHHHh--------------hCCCHHHH
Confidence 455555443322 122232211 0112233344443 223445677776654432 24899999
Q ss_pred HHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEcc
Q 011766 386 LRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNG 450 (478)
Q Consensus 386 l~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G 450 (478)
++++|.|||+.+|++++.|.|++|+.|||+++|.+ ..+..||++|
T Consensus 330 l~~aT~npA~~lg~~~~~G~i~~G~~ADlvv~d~~--------------------~~v~~~~~~G 374 (374)
T cd00854 330 VRMASLNPAKLLGLDDRKGSLKPGKDADLVVLDDD--------------------LNVKATWING 374 (374)
T ss_pred HHHHhHHHHHHcCCCCCcCCcCCCCcCCEEEECCC--------------------CcEEEEEeCc
Confidence 99999999999999877899999999999999996 5899999887
No 85
>PRK01211 dihydroorotase; Provisional
Probab=99.96 E-value=4.9e-27 Score=225.53 Aligned_cols=355 Identities=13% Similarity=0.101 Sum_probs=192.2
Q ss_pred EEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCCC
Q 011766 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDV 101 (478)
Q Consensus 22 ~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~~ 101 (478)
.|+|..+. ++ ....++|+|+||||++|++.. .++++||++| +|+|||||+|+|+...
T Consensus 2 ~~~~~~~~--~~---~~~~~di~I~dGkI~~i~~~~--------~~~~~ida~g-~vlPG~ID~HvH~r~p--------- 58 (409)
T PRK01211 2 AICGNFYY--KG---KFDYLEIEVEDGKIKSIKKDA--------GNIGKKELKG-AILPAATDIHVHFRTP--------- 58 (409)
T ss_pred eeeceeEE--cC---cEEEEEEEEECCEEEEecCCC--------CCceEEEecc-EEcCCeEEeeeccCCC---------
Confidence 46655444 22 234579999999999998643 1457899999 9999999999998331
Q ss_pred CchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC-----HHHHHHHHHHhCCeEEEecccccCCCC
Q 011766 102 DLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELLGLRACLVQSTMDCGEG 176 (478)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~ 176 (478)
.+...+ ......++++++|||++++++... ...+....+...-...+.........
T Consensus 59 ---------------g~~~ke---d~~s~s~AAaaGGvTtv~dmPnt~P~~~~~e~~~~~~~~a~~~s~vd~~~~~~~~- 119 (409)
T PRK01211 59 ---------------GETEKE---DFSTGTLSAIFGGTTFIMDMPNNNIPIKDYNAFSDKLGRVAPKAYVDFSLYSMET- 119 (409)
T ss_pred ---------------CCcccC---cHHHHHHHHHcCCcEEEEECCCCCCCCChHHHHHHHHHHhccCceeeEEEEeccC-
Confidence 111111 223345678999999999986421 22222222222222222221111100
Q ss_pred CCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEecc
Q 011766 177 LPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 256 (478)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~ 256 (478)
. ...+ +.. .+...++.+.... ............++.+.+.|..+.+|+.
T Consensus 120 ----------~----------------~~~~-~~~---~g~~~~k~f~~~~-~~~~~~~~~~~~l~~~~~~g~~v~~H~E 168 (409)
T PRK01211 120 ----------G----------------NNAL-ILD---ERSIGLKVYMGGT-TNTNGTDIEGGEIKKINEANIPVFFHAE 168 (409)
T ss_pred ----------C----------------chhh-HHh---ccCcEEEEEcCCC-cCCCccccCHHHHHHHHccCCEEEEecc
Confidence 0 0011 111 1223344332211 0010001122244556688999999997
Q ss_pred CChhhhH-----HHhhhcCCCCch-HH---HHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-----
Q 011766 257 EIPYENQ-----VVMDTRKVDHGT-VT---FLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM----- 322 (478)
Q Consensus 257 ~~~~~~~-----~~~~~~~~~~~~-~~---~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~----- 322 (478)
+..-... .....+...... .+ ..........+..+.|.+. .+.+ ..+.+.+||.+....
T Consensus 169 ~~~l~~~~~~~~~~~~~~~~~rP~~aE~~ai~~~~~la~~~~hi~HvSt--~~~~-----~~vt~Ev~phhL~l~~~~~~ 241 (409)
T PRK01211 169 LSECLRKHQFESKNLRDHDLARPIECEIKAVKYVKNLDLKTKIIAHVSS--IDVI-----GRFLREVTPHHLLLNDDMPL 241 (409)
T ss_pred ChHHhhhhhhCcchHhhCCCCCCHHHHHHHHHHHHHHhCCCcEEEEecC--hhhc-----CceEEEecHHHHcccccccc
Confidence 6442211 000000000001 11 1111122222444555553 2223 257778888754311
Q ss_pred ----cCCCcH---------HHHHHCCCcEEEcCCCCCCCCCc--CHH---------HHHHHHHHHhcccccccCCCCCCC
Q 011766 323 ----LGFAPI---------KEMLHADICVSLGTDGAPSNNRM--SIV---------DEMYLASLINKGREVFANGTTDPA 378 (478)
Q Consensus 323 ----~~~~~~---------~~~~~~gv~v~~gsD~~~~~~~~--~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 378 (478)
.-.+|+ .+.+..|...+++|||.|+.... +++ +.+ ...+.. ...+.
T Consensus 242 ~~~~kvnPPLRs~~d~~aL~~~l~dG~ID~i~SDHaP~~~~eK~~~~~a~~G~~gle~~-lpl~~~---------~v~~~ 311 (409)
T PRK01211 242 GSYGKVNPPLRDRWTQERLLEEYISGRFDILSSDHAPHTEEDKQEFEYAKSGIIGVETR-VPLFLA---------LVKKK 311 (409)
T ss_pred CCceeEcCCCCCHHHHHHHHHHHhCCCCCEEeCCCCCCChhHhCCHhhCCCCCCcHHHH-HHHHHH---------HHHcC
Confidence 112233 36677899999999998763111 111 111 111111 01234
Q ss_pred CCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhh-----hhhhccCCCCeeEEEEccEEE
Q 011766 379 ALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRIT-----SLVYCMRTENVVSVMCNGQWV 453 (478)
Q Consensus 379 ~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~-----~~~~~~~~~~v~~v~v~G~~v 453 (478)
++|++++++++|.|||++||+ + +|+|++|++|||||+|.+..+....++..+ -+... ...++.+||++|+++
T Consensus 312 ~isl~~~v~~~s~nPAki~gl-~-kG~l~~G~~ADlvi~D~~~~~~v~~~~~~s~~~~spf~G~-~~~~v~~tiv~G~~v 388 (409)
T PRK01211 312 ILPLDVLYKTAIERPASLFGI-K-KGKIEEGYDADFMAFDFTNIKKINDKRLHSKCPVSPFNGF-DAIFPSHVIMRGEVV 388 (409)
T ss_pred CCCHHHHHHHHHHHHHHHhCC-C-CCcccCCCcCCEEEEcCCCeEEEChHHhhccCCCCCCCCC-EeccEEEEEECCEEE
Confidence 699999999999999999999 3 699999999999999998544332221111 11011 112799999999999
Q ss_pred EECCeeecccHHHHHH
Q 011766 454 MKNKKILLLMRGRLFQ 469 (478)
Q Consensus 454 ~~~g~~~~~~~~~~~~ 469 (478)
|+++++.+.+.|++++
T Consensus 389 ~~~~~~~~~~~G~~~~ 404 (409)
T PRK01211 389 IDNYELISERTGKFVP 404 (409)
T ss_pred EECCEEccccCceEec
Confidence 9999887655666653
No 86
>PRK10027 cryptic adenine deaminase; Provisional
Probab=99.95 E-value=7.3e-26 Score=224.34 Aligned_cols=333 Identities=17% Similarity=0.203 Sum_probs=191.7
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~ 96 (478)
.+.+++|+|++|+++.. .....++|+|++|+|++|++.... ..+.++||++|++|+|||||+|+|+..+
T Consensus 28 ~~~dllI~ng~vv~~~~--~~~~~~~V~I~~GrI~~Vg~~~~~-----~~~~~vIDa~G~~v~PGlIDaHvHiess---- 96 (588)
T PRK10027 28 AVADYIIDNVSILDLIN--GGEISGPIVIKGRYIAGVGAEYAD-----APALQRIDARGATAVPGFIDAHLHIESS---- 96 (588)
T ss_pred CCCCEEEECcEEEeCCC--CcEEeeEEEEECCEEEEeCCCCCC-----CCCCeEEECCCCEEEECeEeccccCCcc----
Confidence 45678999999997532 234557999999999999764221 1245899999999999999999999421
Q ss_pred ccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc--------CHHHHHHHHHHhCCeEEEec
Q 011766 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLGLRACLVQ 168 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~--------~~~~~~~~~~~~g~~~~~~~ 168 (478)
+.....+. ..++.+|+||+++.+.. ...-+.+.....++..+...
T Consensus 97 ---------------------~~~p~~~a------~aal~~G~TtVv~dPhei~nv~g~~gi~~~l~~a~~~p~~~~~~~ 149 (588)
T PRK10027 97 ---------------------MMTPVTFE------TATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQARQNQYLQV 149 (588)
T ss_pred ---------------------cCCHhHHH------HHHHhCceEEEEcCCCCcccCCCHHHHHHHHHHhhhCCCeeEEee
Confidence 11112222 23789999999984321 12233444455565554332
Q ss_pred ccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcC
Q 011766 169 STMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK 248 (478)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~ 248 (478)
+ .+.+..+. .+..... +...+..++++.-. .-.+.-+..+.+.....++.+.++... .+
T Consensus 150 p--s~vpa~~~---~Et~Ga~----------~~~~~~~~~l~~~~---v~glgEvMn~~~V~~~d~~~~~ki~~~---~~ 208 (588)
T PRK10027 150 S--SCVPALEG---CDVNGAS----------FTLEQMLAWRDHPQ---VTGLAEMMDYPGVISGQNALLDKLDAF---RH 208 (588)
T ss_pred c--ccCcCCcc---cccCCCc----------CCHHHHHHHhcCCC---ceeEEeccCccccccCCHHHHHHHHHh---CC
Confidence 1 12211110 0111111 11224444443211 111111133344445667777777643 78
Q ss_pred CceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhccCCCcH
Q 011766 249 TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPI 328 (478)
Q Consensus 249 ~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 328 (478)
..+.-|+...... ....+...+.. -.|-....++.+++ .+.|..+.+.-.+..+ ....+
T Consensus 209 ~~idGH~p~l~g~-------------~L~ay~aaGi~-----sDHE~~t~eea~ek-lr~Gm~v~iRegS~~~--nl~~l 267 (588)
T PRK10027 209 LTLDGHCPGLGGK-------------ELNAYIAAGIE-----NCHESYQLEEGRRK-LQLGMSLMIREGSAAR--NLNAL 267 (588)
T ss_pred CceECCCCCCChH-------------HHHHHHHcCCC-----CCcccCCHHHHHHH-HHCCCEEEEeCCcccc--CHHHH
Confidence 8999998754321 11222233322 23545433444444 5678777655443211 11222
Q ss_pred HHHHHC-C-CcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcccc
Q 011766 329 KEMLHA-D-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSL 406 (478)
Q Consensus 329 ~~~~~~-g-v~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l 406 (478)
..++.. . -.++|+||.... .++.++-+......... ...|+++++|++++|.|||+.+|+++ +|+|
T Consensus 268 ~~~~~~~~~~~~~l~TDd~~~---~~l~~~Ghi~~~vr~av--------~~~Gi~~~~Ai~mAT~nPA~~lgl~d-~G~I 335 (588)
T PRK10027 268 APLINEFNSPQCMLCTDDRNP---WEIAHEGHIDALIRRLI--------EQHNVPLHVAYRVASWSTARHFGLNH-LGLL 335 (588)
T ss_pred HHHhhccCCCeEEEEcCCCCh---HHHHhccCHHHHHHHHH--------HHcCCCHHHHHHHHHHHHHHHcCCCC-Cccc
Confidence 222221 1 367999997432 12222111111111100 11369999999999999999999964 7999
Q ss_pred ccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeee
Q 011766 407 EAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKIL 460 (478)
Q Consensus 407 ~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~ 460 (478)
++|+.|||+++|.. ....+..||++|++|+++ +.+
T Consensus 336 apG~~ADlvvld~l------------------~~~~v~~v~~~G~~v~~~-~~~ 370 (588)
T PRK10027 336 APGKQADIVLLSDA------------------RKVTVQQVLVKGEPIDAQ-TLQ 370 (588)
T ss_pred CCCCcCCEEEEccC------------------CCceEEEEEECCEEeecc-ccc
Confidence 99999999999963 125799999999999997 654
No 87
>COG3964 Predicted amidohydrolase [General function prediction only]
Probab=99.95 E-value=2e-26 Score=198.51 Aligned_cols=319 Identities=19% Similarity=0.218 Sum_probs=191.6
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~ 96 (478)
.+.+++++|++++++- ..+-+..+|.|.||||+++++ .+.+ .+.++||++|++|.||+||.|+|++.....
T Consensus 2 mqfdiLLt~~rlidpa--~g~d~~tniai~ngkIaa~~d-~~ap-----a~tq~Ida~Gc~VspG~iDlHvHvy~ggt~- 72 (386)
T COG3964 2 MQFDILLTGGRLIDPA--RGIDEITNIAIINGKIAAADD-YPAP-----AETQIIDADGCIVSPGLIDLHVHVYYGGTE- 72 (386)
T ss_pred CccceeeeCCeecccc--cccCccceeeeecCeEEeccC-cCCC-----hhheEEccCccEeccCeeeeeeEEecCCCc-
Confidence 4679999999999642 223344599999999999994 3322 356899999999999999999999642211
Q ss_pred ccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCH---HHHHHHH-HHh--CCeEEEeccc
Q 011766 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV---SEMAKAV-ELL--GLRACLVQST 170 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~---~~~~~~~-~~~--g~~~~~~~~~ 170 (478)
....+ +.+ ...+||||++|.|+... ..+.+.. +.. .+.+++..
T Consensus 73 -------------------~~v~p-d~~---------ga~~GvTTvVDAGSaGaanf~gF~r~vie~Sr~RI~Aflnv-- 121 (386)
T COG3964 73 -------------------GGVRP-DMY---------GAPNGVTTVVDAGSAGAANFDGFYRTVIEASRVRIKAFLNV-- 121 (386)
T ss_pred -------------------cCcCH-HHc---------cccCCceEEEecCCcCccchhhHHHHhhcchhheeeeeeec--
Confidence 11111 211 45789999999875432 2222221 222 23333221
Q ss_pred ccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCC-CeEEEEeccccccCCHHHHHHHHHHHHHcCC
Q 011766 171 MDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADG-RIRIWFGIRQIMNATDRLLLETRDMAREFKT 249 (478)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~ 249 (478)
...|...... -.....++ .....+.+++..+.-.+ .++......+.+..+ -++...+.++..++
T Consensus 122 s~~Gl~a~nE---~~d~~nid----------~d~i~aa~reh~d~ivGlKvR~s~~~~g~~Git--Pl~la~~ia~~~kl 186 (386)
T COG3964 122 SPPGLTASNE---LYDPDNID----------EDKIHAAFREHRDVIVGLKVRVSTEDIGEYGIT--PLTLALRIANDLKL 186 (386)
T ss_pred cCcceeeehh---hCChhhCC----------HHHHHHHHHhCcCcEEEEEEEeeeccccccCCc--hHHHHHHHHhhcCC
Confidence 1111100000 00011111 11344444444332111 111112222333343 46677888999999
Q ss_pred ceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCC-----------hhHHHHHHhcCCeEEECccc
Q 011766 250 GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN-----------HTEIGLLSRAGVKVSHCPAS 318 (478)
Q Consensus 250 ~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~-----------~~~~~~~~~~~~~~~~~p~~ 318 (478)
|+++|..+.......++.. +...-++.||.+-- ...++++++.|+.++.....
T Consensus 187 PlmvHigePp~~~dEvler----------------L~~GDIitHcfngkpn~~l~~dg~vr~~vrra~erGV~fD~ghG~ 250 (386)
T COG3964 187 PLMVHIGEPPVLMDEVLER----------------LRRGDIITHCFNGKPNTILTDDGVVRAEVRRARERGVIFDAGHGR 250 (386)
T ss_pred ceEEecCCCCccHHHHHHh----------------ccCCceeeeeccCCCCCccccchhHHHHHHHHHhcceEEEccCCc
Confidence 9999999976655444332 23345678887632 24578888899888765432
Q ss_pred hhhccCCCcHHHHHHCC-CcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 011766 319 AMRMLGFAPIKEMLHAD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 397 (478)
Q Consensus 319 ~~~~~~~~~~~~~~~~g-v~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~l 397 (478)
. ...+.-.++++..| .+..++||-...+ .++ +.....++..++. -.-||++.+.++++|.|||..+
T Consensus 251 a--sfsf~vAr~aia~GllP~~ISSDlh~~~-~~n-~Pv~dla~~mSKl---------lalgmpl~~Vi~avT~npA~~i 317 (386)
T COG3964 251 A--SFSFNVARRAIANGLLPDIISSDLHTIT-KLN-GPVYDLAWIMSKL---------LALGMPLTDVINAVTHNPAVLI 317 (386)
T ss_pred c--eeeHHHHHHHHhcCCCcceeeccceeee-ecC-chHHHHHHHHHHH---------HHcCCcHHHHHHHHhcCHHHHh
Confidence 2 12244567889999 6899999964321 111 1111122222210 1236999999999999999999
Q ss_pred CCCCCccccccCccccEEEEcCC
Q 011766 398 LWDNDIGSLEAGKKADMVVVDPF 420 (478)
Q Consensus 398 gl~~~~G~l~~G~~ADlvv~d~~ 420 (478)
++. .+|+|+||..|||+||+..
T Consensus 318 ~l~-~~gtLa~G~~aD~tvf~lk 339 (386)
T COG3964 318 GLA-EIGTLAPGAFADITVFKLK 339 (386)
T ss_pred Ccc-ccCccCCCcccceEEEEec
Confidence 995 6899999999999999874
No 88
>PRK07369 dihydroorotase; Provisional
Probab=99.95 E-value=3.7e-26 Score=221.22 Aligned_cols=335 Identities=16% Similarity=0.123 Sum_probs=187.1
Q ss_pred cceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccc
Q 011766 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~ 97 (478)
|.+++|+|++|+++.+ .....++|+|+||+|++|++.... +..+.++||++|++|+|||||+|+|+...
T Consensus 1 ~~~~~i~n~~v~d~~~--~~~~~~~v~I~dg~I~~i~~~~~~----~~~~~~~iDa~G~~vlPG~ID~H~H~~~~----- 69 (418)
T PRK07369 1 MSNELLQQVRVLDPVS--NTDRIADVLIEDGKIQAIEPHIDP----IPPDTQIIDASGLILGPGLVDLYSHSGEP----- 69 (418)
T ss_pred CCCEEEeCeEEECCCC--CcccceeEEEECCEEEEecCCccc----CCCCCEEEECCCCEEecCEEecccccCCC-----
Confidence 3578999999995432 233667999999999999864321 11356899999999999999999998321
Q ss_pred cCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC-----HHHHHHHHHHhCCeEEEeccccc
Q 011766 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELLGLRACLVQSTMD 172 (478)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~ 172 (478)
.+...+ ......+.++++|||++.+++... ...+....+...-..++......
T Consensus 70 -------------------~~~~~e---~~~s~~~aa~~GGvTtv~~~pn~~P~~~~~~~~~~~~~~~~~~~~vd~~~~~ 127 (418)
T PRK07369 70 -------------------GFEERE---TLASLAAAAAAGGFTRVAILPDTFPPLDNPATLARLQQQAQQIPPVQLHFWG 127 (418)
T ss_pred -------------------CcCCCc---cHHHHHHHHHhCCceEEEECCCCCCCCCCHHHHHHHHHHhcccCceeEEEEE
Confidence 011111 112234668999999999986321 22222222221111111100000
Q ss_pred CCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCcee
Q 011766 173 CGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIH 252 (478)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~ 252 (478)
. +... ....... +..++ ...+ ...+ . ..........+.+.++.+++.|.++.
T Consensus 128 ~---~~~~----~~~~~~~------------ei~~l----~~~G--v~~f-~--~~~~~~~~~~l~~~~~~~~~~~~~v~ 179 (418)
T PRK07369 128 A---LTLG----GQGKQLT------------ELAEL----AAAG--VVGF-T--DGQPLENLALLRRLLEYLKPLGKPVA 179 (418)
T ss_pred E---EeeC----CCCccHh------------hHHHH----HHCC--CEEE-E--CCCcCCCHHHHHHHHHHHHhcCCeEE
Confidence 0 0000 0000011 22222 2222 2211 1 11222355678888899999999999
Q ss_pred EeccCChhhhHHH------hhhcCCCC--c------hHHHHhhhCCCCCCeeeeeeccC-ChhHHHHHHhcC--CeEEEC
Q 011766 253 MHVAEIPYENQVV------MDTRKVDH--G------TVTFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAG--VKVSHC 315 (478)
Q Consensus 253 ~H~~~~~~~~~~~------~~~~~~~~--~------~~~~l~~~~~~~~~~~i~h~~~~-~~~~~~~~~~~~--~~~~~~ 315 (478)
+|+.+........ ........ . ....+......+.+..+.|.+.- +-+.++.+++.| +.+.+|
T Consensus 180 ~H~Ed~~l~~~~~~~~g~~~~~~~~~~~p~~aE~~av~r~~~la~~~~~~~hi~HvSs~~~~~~i~~ak~~g~~vt~Ev~ 259 (418)
T PRK07369 180 LWPCDRSLAGNGVMREGLLALRLGLPGDPASAETTALAALLELVAAIGTPVHLMRISTARSVELIAQAKARGLPITASTT 259 (418)
T ss_pred EecCChhhhhcCcccCChhHHHhCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEEeCCCHHHHHHHHHHHHcCCCeEEEec
Confidence 9997644311000 00000000 0 01222333344566777776642 123445555555 567888
Q ss_pred ccchhhc-----------cCCCcH---------HHHHHCCCcEEEcCCCCCCCCCc---CHHH--------HHHHHHHHh
Q 011766 316 PASAMRM-----------LGFAPI---------KEMLHADICVSLGTDGAPSNNRM---SIVD--------EMYLASLIN 364 (478)
Q Consensus 316 p~~~~~~-----------~~~~~~---------~~~~~~gv~v~~gsD~~~~~~~~---~~~~--------~~~~~~~~~ 364 (478)
|.+.... .-.+|+ .+.+..|...+++|||.|+.... +++. +..+.....
T Consensus 260 phhL~l~~~~~~~~~~~~kv~PPLR~~~d~~aL~~~l~~G~Id~i~SDHaP~~~~~K~~~~~~~~~G~~G~e~~l~~~~~ 339 (418)
T PRK07369 260 WMHLLLDTEALASYDPNLRLDPPLGNPSDRQALIEGVRTGVIDAIAIDHAPYTYEEKTVAFAEAPPGAIGLELALPLLWQ 339 (418)
T ss_pred HHHHhccHHHHhccCCCcEECCCCCCHHHHHHHHHHHhcCCCCEEEcCCCCCCHHHccCCHhHCCCCceeHHHHHHHHHH
Confidence 8854311 111333 36678899999999998874211 1110 111111111
Q ss_pred cccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCC
Q 011766 365 KGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWP 423 (478)
Q Consensus 365 ~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~ 423 (478)
.. ....+++++++++++|.|||++||+. .|.|++|++|||+++|.+.-+
T Consensus 340 ~~--------v~~~~i~l~~~v~~~s~nPA~~lgl~--~G~i~~G~~ADlvi~d~~~~~ 388 (418)
T PRK07369 340 NL--------VETGELSALQLWQALSTNPARCLGQE--PPSLAPGQPAELILFDPQKTW 388 (418)
T ss_pred HH--------HHcCCCCHHHHHHHHHHhHHHHhCCC--cCcccCCCcCCEEEEcCCCCE
Confidence 00 01235999999999999999999994 499999999999999987443
No 89
>TIGR00857 pyrC_multi dihydroorotase, multifunctional complex type. All proteins described by this model should represent active and inactive dihydroorotase per se and functionally equivalent domains of multifunctional proteins from higher eukaryotes, but exclude related proteins such as allantoinase.
Probab=99.95 E-value=1.6e-26 Score=224.94 Aligned_cols=350 Identities=17% Similarity=0.143 Sum_probs=190.3
Q ss_pred ecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCCCCchHHhhhccccccCCC
Q 011766 39 RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNM 118 (478)
Q Consensus 39 ~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (478)
..++|+|+||||++|++.. . ..+.++||++|++|+|||||+|+|+... . .
T Consensus 4 ~~~~v~I~~g~I~~i~~~~-~-----~~~~~~ida~g~~v~PG~ID~H~H~~~~-----------------------~-~ 53 (411)
T TIGR00857 4 TEVDILVEGGRIKKIGKLR-I-----PPDAEVIDAKGLLVLPGFIDLHVHLRDP-----------------------G-E 53 (411)
T ss_pred EEEEEEEECCEEEEeeccC-C-----CCCCeEEECCCCEEecCEEEcccCCCCC-----------------------C-C
Confidence 4579999999999997421 1 1245799999999999999999998310 0 0
Q ss_pred ChHHHHHHHHHHHHHHHhcCcceeecCCccC-----HHHHHHHHHHhCCeEEEecccccCCCCCCCcccccCCcccCCCC
Q 011766 119 TEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPD 193 (478)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (478)
. ...........++.+|||+++++.... ...+....+...-.......... ++... ....
T Consensus 54 ~---~~~~~~~~~~~~~~~GvTtv~~~~~t~p~~~~~~~l~~~~~~~~~~~~vd~~~~~---~~~~~----~~~~----- 118 (411)
T TIGR00857 54 E---YKEDIESGSKAAAHGGFTTVADMPNTKPPIDTPETLEWKLQRLKKVSLVDVHLYG---GVTQG----NQGK----- 118 (411)
T ss_pred c---cHhHHHHHHHHHHhCCeEEEEEecCCCCCCCcHHHHHHHHHHhccCCcccEEEEE---EEecC----Cccc-----
Confidence 0 112223344568999999999975321 12222222221111111100000 00000 0000
Q ss_pred CCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhh------
Q 011766 194 SSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD------ 267 (478)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~------ 267 (478)
...+ +..+...+ .....+.....+..+...+.++++.++++|+++.+|+.+..-.......
T Consensus 119 ----------~l~e-~~~l~~~G--v~g~~f~~~~~~~~~~~~l~~~~~~a~~~g~~v~iH~E~~~l~~~~~~~~g~~~~ 185 (411)
T TIGR00857 119 ----------ELTE-AYELKEAG--AVGRMFTDDGSEVQDILSMRRALEYAAIAGVPIALHAEDPDLIYGGVMHEGPSAA 185 (411)
T ss_pred ----------cHHH-HHHHHHCC--cEEEEEEeCCcccCCHHHHHHHHHHHHHcCCEEEEecCCHHHHhhhhhcCCcccH
Confidence 1111 12222222 1110011112223567889999999999999999999764322111000
Q ss_pred -hcCCC-Cc-----h-HHHHhhhCCCCCCeeeeeeccCC-hhHHHHHHhcC--CeEEECccchhhc-----------cCC
Q 011766 268 -TRKVD-HG-----T-VTFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG--VKVSHCPASAMRM-----------LGF 325 (478)
Q Consensus 268 -~~~~~-~~-----~-~~~l~~~~~~~~~~~i~h~~~~~-~~~~~~~~~~~--~~~~~~p~~~~~~-----------~~~ 325 (478)
.+... .. . ...+......+.+..+.|.+.-. -+.+..+++.| +.+.+||.+.+.. .-.
T Consensus 186 ~~~~~~~p~~aE~~ai~~~~~la~~~~~~~~i~Hvs~~~~l~~i~~a~~~g~~v~~ev~ph~L~~~~~~~~~~~~~~k~~ 265 (411)
T TIGR00857 186 QLGLPARPPEAEEVAVARLLELAKHAGCPVHICHISTKESLELIVKAKSQGIKITAEVTPHHLLLSEEDVARLDGNGKVN 265 (411)
T ss_pred hhCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHHHHHcCCcEEEeechhhheecHHHHhCCCccEEEc
Confidence 00000 00 0 12222223345566777766521 13344455555 5567888643210 011
Q ss_pred C---------cHHHHHHCCCcEEEcCCCCCCCCCc---CHHH--------HHHHHHHHhcccccccCCCCCCCCCCHHHH
Q 011766 326 A---------PIKEMLHADICVSLGTDGAPSNNRM---SIVD--------EMYLASLINKGREVFANGTTDPAALPAETV 385 (478)
Q Consensus 326 ~---------~~~~~~~~gv~v~~gsD~~~~~~~~---~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ls~~~a 385 (478)
+ .+.+.+..|+..+++||+.|+.... +++. +.....+... ..+.+++++++
T Consensus 266 Pplr~~~~~~~L~~~l~~g~i~~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~~~~~~~~---------~~~~~~~~~~~ 336 (411)
T TIGR00857 266 PPLREKEDRLALIEGLKDGIIDIIATDHAPHTLEEKTKEFAAAPPGIPGLETALPLLLQL---------LVKGLISLKDL 336 (411)
T ss_pred CCCCCHHHHHHHHHHHhcCCCcEEEcCCCCCChHHccCCHhhCCCCceeHHHHHHHHHHH---------HHhCCCCHHHH
Confidence 2 3446788899999999998763111 0110 1111111110 01225999999
Q ss_pred HHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhh-----ccCCCCeeEEEEccEEEEEC
Q 011766 386 LRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVY-----CMRTENVVSVMCNGQWVMKN 456 (478)
Q Consensus 386 l~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~-----~~~~~~v~~v~v~G~~v~~~ 456 (478)
++++|.|||+++|+.++ |+|++|+.|||+++|.+..+..+.++..+...+ .....+|.+|+++|++||+|
T Consensus 337 ~~~~t~~pa~~~g~~~~-G~l~~G~~ADlvi~d~~~~~~~~~~~~~~~~~~sp~~g~~~~g~v~~tiv~G~~v~~~ 411 (411)
T TIGR00857 337 IRMLSINPARIFGLPDK-GTLEEGNPADITVFDLKKEWTINAETFYSKAKNTPFEGMSLKGKPIATILRGKVVYED 411 (411)
T ss_pred HHHHhHHHHHHhCCCCC-CccCCCCcCCEEEEcCCCCEEEchHHCccCCCCCCcCCCEEEeEEEEEEECCEEEecC
Confidence 99999999999999544 999999999999999885432222221111100 01123799999999999975
No 90
>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases. These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases.
Probab=99.95 E-value=1.5e-26 Score=212.16 Aligned_cols=256 Identities=20% Similarity=0.286 Sum_probs=190.5
Q ss_pred EEeecccccccccchhhhccccCCCCchHHh---hhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc---CH
Q 011766 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWL---HDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HV 150 (478)
Q Consensus 77 ~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~---~~ 150 (478)
+|+|||||+|+|..++.+|+...+.++.+|+ .+..|+.+..+++++.+......+.+++++||||+.|+... ..
T Consensus 1 ~v~PG~vn~H~H~~~~~~rg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~ 80 (263)
T cd01305 1 ILIPALVNAHTHLGDSAIKEVGDGLPLDDLVAPPDGLKHRLLAQADDRELAEAMRKVLRDMRETGIGAFADFREGGVEGI 80 (263)
T ss_pred CccccceeccccHHHHHhhcCCCCCcHHHHhcCcccchHHHHHhCCHHHHHHHHHHHHHHHHhcCCeEEEEccCcchhHH
Confidence 4899999999999999999988888888866 33445667889999999999999999999999999997532 24
Q ss_pred HHHHHHHHHhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccc
Q 011766 151 SEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIM 230 (478)
Q Consensus 151 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (478)
....+..+..|++. ...++. +.. . . ..++ +.+ +...++++...
T Consensus 81 ~a~~~a~~~~g~r~---~~~~~~----~~~------~---~------------~~~~-~~~--------~~~~~~~~~~~ 123 (263)
T cd01305 81 ELLRRALGKLPVPF---EVILGR----PTE------P---D------------DPEI-LLE--------VADGLGLSSAN 123 (263)
T ss_pred HHHHHHHHhcCCCc---eEEecc----CCc------c---h------------HHHH-HHh--------hcccccCCCCC
Confidence 56677778888874 111110 100 0 0 1111 111 11125556665
Q ss_pred cCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCC
Q 011766 231 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGV 310 (478)
Q Consensus 231 ~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~ 310 (478)
+++ +++++++|+++|+++++|+.+...+. +...++.+... +++ .+.|+.++++++++++++.|+
T Consensus 124 ~~~---l~~~~~~A~~~g~~v~~H~~e~~~~~---------g~~~i~~~~~~---~~~-~i~H~~~l~~~~~~~la~~g~ 187 (263)
T cd01305 124 DVD---LEDILELLRRRGKLFAIHASETRESV---------GMTDIERALDL---EPD-LLVHGTHLTDEDLELVRENGV 187 (263)
T ss_pred ccC---HHHHHHHHHHCCCeeEEecCCCCCCC---------CchhHHHHHhC---CCC-EEEEcCCCCHHHHHHHHHcCC
Confidence 555 99999999999999999999865421 01123333332 333 479999999999999999999
Q ss_pred eEEECccchhhc-cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHH
Q 011766 311 KVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMA 389 (478)
Q Consensus 311 ~~~~~p~~~~~~-~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~ 389 (478)
.+++||.++... .+..|+++++++|+++++|||+... ++.+++++|+.+....... ..++++++|+++
T Consensus 188 ~v~~~P~sn~~l~~g~~p~~~l~~~Gv~v~lGtD~~~~-~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~a 256 (263)
T cd01305 188 PVVLCPRSNLYFGVGIPPVAELLKLGIKVLLGTDNVMV-NEPDMWAEMEFLAKYSRLQ----------GYLSPLEILRMA 256 (263)
T ss_pred cEEEChhhHHHhCCCCCCHHHHHHCCCcEEEECCCCcc-CCCCHHHHHHHHHHHhccc----------ccCCHHHHHHHH
Confidence 999999998876 6789999999999999999998654 4678999999877554311 147999999999
Q ss_pred hHHHHHH
Q 011766 390 TINGAKS 396 (478)
Q Consensus 390 T~~pA~~ 396 (478)
|.|+|++
T Consensus 257 T~~gA~~ 263 (263)
T cd01305 257 TVNAAEF 263 (263)
T ss_pred hhccccC
Confidence 9999974
No 91
>PRK04250 dihydroorotase; Provisional
Probab=99.95 E-value=8.8e-26 Score=217.23 Aligned_cols=349 Identities=15% Similarity=0.166 Sum_probs=184.3
Q ss_pred ecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCCCCch
Q 011766 25 NAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLM 104 (478)
Q Consensus 25 n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~~~~~ 104 (478)
+++|++.. .+ .+++|+|+||+|++|++... .+.++||++|++|+|||||+|+|+...
T Consensus 3 ~~~v~~~~---~~-~~~~i~i~~G~I~~i~~~~~-------~~~~~iD~~g~~v~PG~ID~HvH~~~~------------ 59 (398)
T PRK04250 3 EGKFLLKG---RI-VEGGIGIENGRISKISLRDL-------KGKEVIKVKGGIILPGLIDVHVHLRDF------------ 59 (398)
T ss_pred eEEEEECC---cE-EEEEEEEECCEEEEeeCCCC-------CCCeEEECCCCEEccCEEeccccccCC------------
Confidence 57788642 33 36799999999999974110 245899999999999999999998210
Q ss_pred HHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC-----HHHHHHHHHHhCCeEEEecccccCCCCCCC
Q 011766 105 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELLGLRACLVQSTMDCGEGLPA 179 (478)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 179 (478)
.. ..........+.++++|||++++++... ...+........-..++...... .
T Consensus 60 ------------~~---~~~e~~~~~~~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~-~----- 118 (398)
T PRK04250 60 ------------EE---SYKETIESGTKAALHGGITLVFDMPNTKPPIMDEKTYEKRMRIAEKKSYADYALNF-L----- 118 (398)
T ss_pred ------------CC---CcHHHHHHHHHHHHhCCeEEEEECCCCCCCCCcHHHHHHHHHHhCcCceeeEEEEE-e-----
Confidence 00 0112234456678999999999986432 22222222222222222211111 0
Q ss_pred cccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCCh
Q 011766 180 SWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 259 (478)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~ 259 (478)
... ...+ +..+.. ..++.+.... ......+.+.. . ..+.+..+.+|+.+..
T Consensus 119 ------~~~---------------~~~~-l~~l~~---~~~k~f~~~~-~~~~~~~~~~~--~-~~~~~~~v~~H~E~~~ 169 (398)
T PRK04250 119 ------IAG---------------NCEK-AEEIKA---DFYKIFMGAS-TGGIFSENFEV--D-YACAPGIVSVHAEDPE 169 (398)
T ss_pred ------cCC---------------CHHH-HHHHHh---hheEEEEecC-CCchhHHHHHH--H-HHhcCCeEEEEecChh
Confidence 000 1111 111111 1123222110 01111111211 1 2223445777775433
Q ss_pred hhhHHHhhhcCCCC-----chHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcC---CeEEECccchhhc---------
Q 011766 260 YENQVVMDTRKVDH-----GTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAG---VKVSHCPASAMRM--------- 322 (478)
Q Consensus 260 ~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~--------- 322 (478)
.... ..+... .....+.-....+.+..+.|.+ +.+.++.+++.| +.+.+||.+....
T Consensus 170 ~~~~----~~~~p~~aE~~av~r~~~la~~~~~~lhi~HvS--t~~~~~~i~~~g~~~vt~Ev~ph~L~l~~~~~~~~~~ 243 (398)
T PRK04250 170 LIRE----FPERPPEAEVVAIERALEAGKKLKKPLHICHIS--TKDGLKLILKSNLPWVSFEVTPHHLFLTRKDYERNPL 243 (398)
T ss_pred hhhc----ccCCCHHHHHHHHHHHHHHHHHhCCCEEEEeCC--CHHHHHHHHHcCCCcEEEEeCHHHhccCHHHHCCCCc
Confidence 2110 000000 0011222223334455555555 345566665554 4567777753211
Q ss_pred -cCCCcHH---------HHHHCCCcEEEcCCCCCCC--------CCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHH
Q 011766 323 -LGFAPIK---------EMLHADICVSLGTDGAPSN--------NRMSIVDEMYLASLINKGREVFANGTTDPAALPAET 384 (478)
Q Consensus 323 -~~~~~~~---------~~~~~gv~v~~gsD~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~ 384 (478)
.-.+|+| +.+. ...+++|||.|+. +...-.+.+ ...+... ..+..+|+++
T Consensus 244 ~k~~PPLR~~~d~~aL~~~l~--~Id~i~sDHaP~~~~~k~~~~~G~~g~e~~-lpl~~~~---------v~~~~lsl~~ 311 (398)
T PRK04250 244 LKVYPPLRSEEDRKALWENFS--KIPIIASDHAPHTLEDKEAGAAGIPGLETE-VPLLLDA---------ANKGMISLFD 311 (398)
T ss_pred eEEcCCCCCHHHHHHHHHhhc--cCCEEEcCCcccCHHHhhcCCCCcchHHHH-HHHHHHH---------HHhcCCCHHH
Confidence 1112332 2222 3788999998762 111112221 1111110 0123599999
Q ss_pred HHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhc---c--CCCCeeEEEEccEEEEECCee
Q 011766 385 VLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYC---M--RTENVVSVMCNGQWVMKNKKI 459 (478)
Q Consensus 385 al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~---~--~~~~v~~v~v~G~~v~~~g~~ 459 (478)
+++++|.|||+++|+. ++| |++|++|||+|+|.+..+..+..+..+...+. . ...+|.+||++|++||++|++
T Consensus 312 ~v~~~t~npAk~lgl~-~~G-L~~G~~ADlvi~D~~~~~~v~~~~~~s~~~~sp~~g~~l~g~v~~tiv~G~~v~~~g~~ 389 (398)
T PRK04250 312 IVEKMHDNPARIFGIK-NYG-IEEGNYANFAVFDMKKEWTIKAEELYTKAGWTPYEGFKLKGKVIMTILRGEVVMEDDEI 389 (398)
T ss_pred HHHHHHHHHHHHhCCC-CcC-ccCCCcCCEEEEcCCCcEEEChhhccccCCCCCCCCCEEeeEEEEEEECCEEEEECCEE
Confidence 9999999999999994 469 99999999999999854433333222211110 1 134789999999999999998
Q ss_pred ecccHHH
Q 011766 460 LLLMRGR 466 (478)
Q Consensus 460 ~~~~~~~ 466 (478)
++...|+
T Consensus 390 ~~~~~G~ 396 (398)
T PRK04250 390 IGKPRGV 396 (398)
T ss_pred cCCCCCe
Confidence 8665554
No 92
>cd01304 FMDH_A Formylmethanofuran dehydrogenase (FMDH) subunit A; Methanogenic bacteria and archea derive the energy for autotrophic growth from methanogenesis, the reduction of CO2 with molecular hydrogen as the electron donor. FMDH catalyzes the first step in methanogenesis, the formyl-methanofuran synthesis. In this step, CO2 is bound to methanofuran and subsequently reduced to the formyl state with electrons derived from hydrogen.
Probab=99.95 E-value=1.5e-25 Score=215.49 Aligned_cols=84 Identities=20% Similarity=0.195 Sum_probs=64.8
Q ss_pred CCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEEC
Q 011766 377 PAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN 456 (478)
Q Consensus 377 ~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~ 456 (478)
+..+|++++++++|.+||++||++ ++|.|++|++|||+|+|.++....+. +..+ . . ....+|.+||++|++|+++
T Consensus 424 ~reLSLeei~~mtT~nPAKiLGL~-~kG~L~~G~~ADLvIfD~n~~~v~~~-dl~s-~-~-~~~gkV~~Tiv~GkvVv~d 498 (541)
T cd01304 424 DREYSLYEIAIMTRAGPAKLLGLS-DKGHLGVGADADIAIYDDDPDQVDPS-DYEK-V-E-KAFSRAAYVLKDGEIVVKD 498 (541)
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCC-CCCccCCCCcCCEEEEeCCcCccCch-hhcC-c-e-eecCcEEEEEECCEEEEEC
Confidence 345899999999999999999995 46999999999999999885533332 2221 1 1 1235799999999999999
Q ss_pred CeeecccHH
Q 011766 457 KKILLLMRG 465 (478)
Q Consensus 457 g~~~~~~~~ 465 (478)
|+++....|
T Consensus 499 Geiv~~~~G 507 (541)
T cd01304 499 GEVVAEPWG 507 (541)
T ss_pred CEEccCCCC
Confidence 988754333
No 93
>cd01307 Met_dep_hydrolase_B Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.94 E-value=8.3e-25 Score=208.01 Aligned_cols=296 Identities=19% Similarity=0.182 Sum_probs=174.6
Q ss_pred eEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCCCCchHHhhhccccccCCCChH
Q 011766 42 GVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEE 121 (478)
Q Consensus 42 ~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (478)
+|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+...... ...
T Consensus 1 ~i~i~~g~I~~i~~~~~~-----~~~~~~id~~g~~v~PG~iD~H~H~~~~g~~--------------------~~~--- 52 (338)
T cd01307 1 DVAIENGKIAAVGAALAA-----PAATQIVDAGGCYVSPGWIDLHVHVYQGGTR--------------------YGD--- 52 (338)
T ss_pred CEEEECCEEEEccCCCCC-----CCCCeEEECCCCEEecCeEEeeecCCCCCcc--------------------cCC---
Confidence 589999999999985321 1246899999999999999999999532100 000
Q ss_pred HHHHHHHHHHHHHHhcCcceeecCCcc---CHHHHHHHH-HHhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCcc
Q 011766 122 DSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAV-ELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSIS 197 (478)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~~~~~~---~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (478)
...+.++.+|+||+++++.. ......+.. ...+.+......+...+...+..+. . ..
T Consensus 53 -------~~~~~a~~~GvTtvvd~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~~~g~~~~~~~~-----~-~~------ 113 (338)
T cd01307 53 -------RPDMIGVKSGVTTVVDAGSAGADNIDGFRYTVIERSATRVYAFLNISRVGLVAQDELP-----D-PD------ 113 (338)
T ss_pred -------CHhHHHHcCceeEEEeCCCCCCCCHHHHHHHHHHhhhceEEEEEeeeccccccccccC-----C-hh------
Confidence 02234789999999987632 223323333 3344422221101001111111100 0 00
Q ss_pred ccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHH
Q 011766 198 FNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVT 277 (478)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~ 277 (478)
........+.+.+. ..+-..++..+..+.......+.+.+.++++++.|+++.+|+.+.......+
T Consensus 114 -~~~~~~l~~~~~e~-~~gi~gik~~~~~~~~~~~~~~~l~~~~~~a~~~~~pi~vH~~~~~~~~~~~------------ 179 (338)
T cd01307 114 -NIDEDAVVAAAREY-PDVIVGLKARASKSVVGEWGIKPLELAKKIAKEADLPLMVHIGSPPPILDEV------------ 179 (338)
T ss_pred -HCCHHHHHHHHHHC-cCcEEEEEEEeecccccccCCcHHHHHHHHHHHcCCCEEEEeCCCCCCHHHH------------
Confidence 00111333334222 2222335544443333333334488889999999999999997655432221
Q ss_pred HHhhhCCCCCCeeeeeeccCCh-----------hHHHHHHhcCCeEEECccchhhccCCCcHHHHHHCCC-cEEEcCCCC
Q 011766 278 FLDKIEFLQNNLLSAHTVWVNH-----------TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADI-CVSLGTDGA 345 (478)
Q Consensus 278 ~l~~~~~~~~~~~i~h~~~~~~-----------~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gv-~v~~gsD~~ 345 (478)
+.. +.....+.|+..-+. +.+..+.+.|+.+++...... ....+..++++.|+ +..++||.+
T Consensus 180 -~~~---l~~g~~~~H~~~g~~~~~~~~~~~~~~~~~~~~~~G~~~d~~~G~~~--~~~~~~~~l~~~G~~~~~lstD~~ 253 (338)
T cd01307 180 -VPL---LRRGDVLTHCFNGKPNGIVDEEGEVLPLVRRARERGVIFDVGHGTAS--FSFRVARAAIAAGLLPDTISSDIH 253 (338)
T ss_pred -HHH---hcCCCEEEeccCCCCCCCCCCCCcHHHHHHHHHhCCEEEEeCCCCCc--hhHHHHHHHHHCCCCCeeecCCcc
Confidence 111 122245677777543 677888899988876632100 11244667888996 578999975
Q ss_pred CCC----CCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCC
Q 011766 346 PSN----NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF 420 (478)
Q Consensus 346 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~ 420 (478)
..+ ....+...++... ..+++.+++++++|.|||+++++ +++|+|++|+.|||++++.+
T Consensus 254 ~~~~~~~p~~~l~~~l~~l~---------------~~gi~~ee~~~~~T~NpA~~lgl-~~~G~l~~G~~ad~~v~~~~ 316 (338)
T cd01307 254 GRNRTNGPVYALATTLSKLL---------------ALGMPLEEVIEAVTANPARMLGL-AEIGTLAVGYDADLTVFDLK 316 (338)
T ss_pred ccCCCCCccccHHHHHHHHH---------------HcCCCHHHHHHHHHHHHHHHcCC-CCCCccCCCCcCCEEEEeCC
Confidence 421 1111222222211 12699999999999999999999 56899999999999999986
No 94
>COG3454 Metal-dependent hydrolase involved in phosphonate metabolism [Inorganic ion transport and metabolism]
Probab=99.93 E-value=1.8e-24 Score=188.70 Aligned_cols=162 Identities=17% Similarity=0.148 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccC-ChhHHHHHHhcCCeEEE
Q 011766 236 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVKVSH 314 (478)
Q Consensus 236 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~-~~~~~~~~~~~~~~~~~ 314 (478)
..+.+.++|++.|+.+..|-.....-.+... ..+ +.-..+. +.+..+...+.|..+.+
T Consensus 211 ~r~~i~~~c~~rgI~lASHDDaT~~hV~es~--------------~~G-------v~iAEFPtT~eAA~asr~~Gm~VlM 269 (377)
T COG3454 211 NRQAIAALCRERGIALASHDDATVEHVAESH--------------GLG-------VAIAEFPTTVEAAKASRELGMQVLM 269 (377)
T ss_pred hHHHHHHHHHHcCCceecCCcCcHHHHHHHH--------------hcC-------eeEEeCccHHHHHHHHHHhCchhhc
Confidence 4566678888888888888765433222111 111 1122222 34455556667877777
Q ss_pred Cccchhhc---cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCH-HHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHh
Q 011766 315 CPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMSI-VDEMYLASLINKGREVFANGTTDPAALPAETVLRMAT 390 (478)
Q Consensus 315 ~p~~~~~~---~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T 390 (478)
..+.-.+. .|.-..+++.+.|+..+++||..|. ++ ...+..+.... .+|+.||+++.|
T Consensus 270 GAPNivrGgSHsGNvsA~ela~~glLDiLsSDY~P~----SLl~A~F~La~~~~--------------~~~lpqAvalvt 331 (377)
T COG3454 270 GAPNIVRGGSHSGNVSARELAQHGLLDILSSDYVPA----SLLHAAFRLADLGS--------------NISLPQAVALVT 331 (377)
T ss_pred CCCceeccCCcccchhHHHHHhCCceeeecccCCcH----HHHHHHHHHhhhhc--------------ccCHHHHHHHhc
Confidence 66655544 3444668899999999999998664 23 23333333221 368999999999
Q ss_pred HHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEE
Q 011766 391 INGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVM 454 (478)
Q Consensus 391 ~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~ 454 (478)
.|||+++|+.+ +|+|++|++||||.+..+. ....|+.||+.|+-|+
T Consensus 332 ~nPA~algl~D-RG~Ia~GlrADlv~v~~~~-----------------~vp~ir~vwr~G~rv~ 377 (377)
T COG3454 332 KNPARALGLTD-RGRIAPGLRADLVRVRRDG-----------------GVPVIRTVWRAGKRVA 377 (377)
T ss_pred cCHHHhcCCCc-ccccccccccceEEEecCC-----------------CCceeeeeeecceecC
Confidence 99999999974 6999999999999776641 1258999999999763
No 95
>TIGR03583 EF_0837 probable amidohydrolase EF_0837/AHA_3915. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. These proteins resemble aminohydrolases (see pfam01979), including dihydroorotases. The function is unknown.
Probab=99.93 E-value=1.3e-23 Score=202.20 Aligned_cols=340 Identities=15% Similarity=0.157 Sum_probs=179.0
Q ss_pred ceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCC-CEEeecccccccccchhhhccc
Q 011766 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQS-QILLPGFVNTHVHTSQQLAKGI 97 (478)
Q Consensus 19 ~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G-~~v~PGfID~H~H~~~~~~~~~ 97 (478)
++++|+|++|+++ . ..+|+|+||||++|++.... .+.++||++| ++|+|||||+|+|+....
T Consensus 1 ~~~~i~n~~i~~~--~-----~~~v~i~~g~I~~v~~~~~~------~~~~~iD~~g~~~l~PG~ID~H~H~~~~~---- 63 (365)
T TIGR03583 1 YDLLIKNGRTVNG--T-----PVDIAIEDGKIAAVGTTITG------SAKQTIDLEGETYVSAGWIDDHTHCFPKS---- 63 (365)
T ss_pred CcEEEECcEEecC--C-----eeEEEEECCEEEEecCCCCC------CCCeEEECCCCeEEecCEEEeeeccCCCc----
Confidence 4789999999953 1 23999999999999864321 2458999999 999999999999984210
Q ss_pred cCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCc---cCHHHHHHHHHHhCCeEEEecccccCC
Q 011766 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGLRACLVQSTMDCG 174 (478)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~ 174 (478)
.... .+ .. ..++.+|||++.+++. .....+.+..+..+.+.+.... . ..
T Consensus 64 ------------------~~~~-~~-~~------~~a~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~-~~ 115 (365)
T TIGR03583 64 ------------------ALYY-DE-PD------EIGVKTGVTTVVDAGSTGADDIDDFYRLAQQAKTNVFALLN-I-SR 115 (365)
T ss_pred ------------------cccc-CC-Hh------HhhhcCceeEEEeCCCCCCCCHHHHHHHHHhhCCcEEEEee-e-hh
Confidence 0000 00 00 1247889999998652 2333444444443322211100 0 00
Q ss_pred CCC-CCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEecccc--ccCCHHHHHHHHHHHHHcCCce
Q 011766 175 EGL-PASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQI--MNATDRLLLETRDMAREFKTGI 251 (478)
Q Consensus 175 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~a~~~~~~v 251 (478)
.+. ++.. ...... .......+.++.+... .-.++..+.+... ...++..+.+.+..+ +.++++
T Consensus 116 ~G~~~~~~----~~~~~~--------~~~~~l~~~~~~~~~~-vv~~~~~~t~~~i~E~gl~~~~~~~~l~~~-~~~~pv 181 (365)
T TIGR03583 116 IGLVAQDE----LADLSN--------LDASAVKQAVERYPDF-IVGLKARMSKSVVGDNGIEPLEIAKQIQQE-NLELPL 181 (365)
T ss_pred ccccChhh----hhChHH--------hHHHHHHHHHHhCcCc-EEEEEEeecccccccCCcCHHHHHHHHHHh-cCCCcE
Confidence 111 1100 000000 0001222233222110 0011222222211 122243444433333 578999
Q ss_pred eEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCCh-----------hHHHHHHhcCCeEEECc-cch
Q 011766 252 HMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-----------TEIGLLSRAGVKVSHCP-ASA 319 (478)
Q Consensus 252 ~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~-----------~~~~~~~~~~~~~~~~p-~~~ 319 (478)
.+|+.+.......+.. ... ....+.|+..-.+ +.+....+.|..+.... ...
T Consensus 182 ~vH~~~a~~~~~~i~~-------------~~~---~g~~~~H~fng~~~~~~r~~g~~~~~~~~~l~~G~i~d~~hg~~~ 245 (365)
T TIGR03583 182 MVHIGSAPPELDEILA-------------LME---KGDVLTHCFNGKPNGILRETGEVKPSVLEAYNRGVILDVGHGTAS 245 (365)
T ss_pred EEEeCCCccCHHHHHH-------------Hhc---CCCeeeeeecCCCCCCCCCcchHHHHHHHHHhCeEEEEeCCCCCC
Confidence 9999876544333222 111 1113577665443 66666777788777652 211
Q ss_pred hhccCCCcHHHHHHCC-CcEEEcCCCCCCC----CCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHH
Q 011766 320 MRMLGFAPIKEMLHAD-ICVSLGTDGAPSN----NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGA 394 (478)
Q Consensus 320 ~~~~~~~~~~~~~~~g-v~v~~gsD~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA 394 (478)
.. ......+...+ +.++.++|....+ +...+...++... . .|++++++++++|.|||
T Consensus 246 ~~---~~~~~~~~~~~~~~~td~~d~~~~~~~~gp~~~l~~~~~~~~-~--------------~g~~~~ea~~~~t~npa 307 (365)
T TIGR03583 246 FS---FHVAEKAKRAGIFPDTISTDIYIRNRINGPVYSLATVMSKFL-A--------------LGYSLEEVIEKVTKNAA 307 (365)
T ss_pred ch---HHHHHHHHhCCCCCcccccccccCCCccCccccHHHHHHHHH-H--------------cCCCHHHHHHHHHHHHH
Confidence 11 11122333344 3455666653221 1112333333222 1 26999999999999999
Q ss_pred HHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEE
Q 011766 395 KSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWV 453 (478)
Q Consensus 395 ~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v 453 (478)
+++|+++ .|+|++|+.|||++||.+.-. ....|-..+....-+...+..|+++|++.
T Consensus 308 ~~~gl~~-~g~i~~g~~ad~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 364 (365)
T TIGR03583 308 EILKLTQ-KGRLQEGYDADLTIFTVKAEP-KKLTDSEGDSRIAEEQIKPLAVIIGGEYY 364 (365)
T ss_pred HHhCCCC-CCCcCCCCcccEEEEecCCCC-ceeecCCCCEEEeccccceEEEEECCEEe
Confidence 9999964 799999999999999974211 12222222222222335678899999853
No 96
>PRK00369 pyrC dihydroorotase; Provisional
Probab=99.92 E-value=9.4e-24 Score=201.76 Aligned_cols=327 Identities=14% Similarity=0.143 Sum_probs=182.5
Q ss_pred cceEEEECCEEEEEcCChhhhhhhccCCCeEEeC-CCCEEeecccccccccchhhhccccCCCCchHHhhhccccccCCC
Q 011766 40 NGGVFVVQDRIKAIGQSADILQQFSQMADQIIDL-QSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNM 118 (478)
Q Consensus 40 ~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~-~G~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (478)
+..|.|++|+|..|++... .++++||+ +|++|+|||||+|+|+... .+
T Consensus 13 ~~~~~~~~~~~~~i~~~~~-------~~~~~id~~~G~~vlPG~ID~HvH~r~p------------------------g~ 61 (392)
T PRK00369 13 KEIKEICINFDRRIKEIKS-------RCKPDLDLPQGTLILPGAIDLHVHLRGL------------------------KL 61 (392)
T ss_pred CceEEEeeeeeeeEeeccC-------CCCceeecCCCCEEeCCEEEcccccCCC------------------------CC
Confidence 3477888999998887521 36789999 6999999999999999321 11
Q ss_pred ChHHHHHHHHHHHHHHHhcCcceeecCCccC-----HHHHHHHHHHhCCeEEEecccccCCCCCCCcccccCCcccCCCC
Q 011766 119 TEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPD 193 (478)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (478)
... .......++++++||||+++++... ...+....+...-..++...... + ...
T Consensus 62 ~~~---ed~~sgs~AAa~GGvTtv~~mPnt~P~~~~~~~l~~~~~~a~~~~~vd~~~~~-~--~~~-------------- 121 (392)
T PRK00369 62 SYK---EDVASGTSEAAYGGVTLVADMPNTIPPLNTPEAITEKLAELEYYSRVDYFVYS-G--VTK-------------- 121 (392)
T ss_pred ccc---ccHHHHHHHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhCcCCeEEEEEEe-e--ccC--------------
Confidence 111 1223345678999999999986432 12222222222222222211111 0 000
Q ss_pred CCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCC
Q 011766 194 SSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDH 273 (478)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~ 273 (478)
+..+ +... +...++.+. . .. ....+++.+.+++..+.+|+.+..-.... .+...
T Consensus 122 ----------~~~e-l~~~---~~~g~k~f~---~--~~---~~~~~~~~~~~~~~~v~~HaE~~~l~~~~----~~~~r 175 (392)
T PRK00369 122 ----------DPEK-VDKL---PIAGYKIFP---E--DL---EREETFRVLLKSRKLKILHPEVPLALKSN----RKLRR 175 (392)
T ss_pred ----------CHHH-HHHh---hCceEEEEC---C--CC---chHHHHHHHHHhCCEEEEeCCCHHHhhcc----hhccc
Confidence 1111 2221 122233221 1 11 11223444455568899999764321110 00000
Q ss_pred ch-HH--HHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-------cCCCcHH---------HHHHC
Q 011766 274 GT-VT--FLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-------LGFAPIK---------EMLHA 334 (478)
Q Consensus 274 ~~-~~--~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-------~~~~~~~---------~~~~~ 334 (478)
.. .+ .+.....+ .+..+.|.+. .+.++.+++.|+.+.+||.+.... .-.+|+| +.+..
T Consensus 176 p~~aE~~ai~~~~~~-~~lhi~HvSt--~~~v~~ak~~gvt~Ev~pHhL~l~~~~~~~~k~~PPLR~~~dr~aL~~~l~~ 252 (392)
T PRK00369 176 NCWYEIAALYYVKDY-QNVHITHASN--PRTVRLAKELGFTVDITPHHLLVNGEKDCLTKVNPPIRDINERLWLLQALSE 252 (392)
T ss_pred CHHHHHHHHHHHHHh-CCEEEEECCC--HHHHHHHHHCCCeEEechhHheeccCCCCceEEeCCCCCHHHHHHHHHHHHh
Confidence 01 11 11222222 4566666663 456788888899999999865421 1122333 33333
Q ss_pred CCcEEEcCCCCCCCCCc---CHHH--------HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCc
Q 011766 335 DICVSLGTDGAPSNNRM---SIVD--------EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDI 403 (478)
Q Consensus 335 gv~v~~gsD~~~~~~~~---~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~ 403 (478)
..+++|||.|+.... +++. +.....+.. .....+++++++++++|.|||+++|+. .
T Consensus 253 --id~i~SDHaP~~~~~K~~~f~~~~~Gi~GlE~~lpll~~---------~v~~~~lsl~~~v~~~s~nPA~ilgl~--~ 319 (392)
T PRK00369 253 --VDAIASDHAPHSSFEKLQPYEVCPPGIAALSFTPPFIYT---------LVSKGILSIDRAVELISTNPARILGIP--Y 319 (392)
T ss_pred --CCEEEeCCCCCCHHHccCCHhhCCCCCeeHHHHHHHHHH---------HHHcCCCCHHHHHHHHHHHHHHHhCCC--C
Confidence 779999998863211 1110 011111111 012346999999999999999999994 3
Q ss_pred cccccCccccEEEEcCCCCCCCCc-----CChhhhhhhccCCCCeeEEEEccEEEEECCeeecc
Q 011766 404 GSLEAGKKADMVVVDPFSWPMVPV-----HDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLL 462 (478)
Q Consensus 404 G~l~~G~~ADlvv~d~~~~~~~~~-----~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~ 462 (478)
|.|++|++|||++||.+.+..... ..|+... .-..+|.+||++|++||+++++++.
T Consensus 320 g~i~~G~~ADlvi~d~~~~~~~~~~sk~~~sp~~G~---~l~G~v~~ti~~G~~v~~~~~~~~~ 380 (392)
T PRK00369 320 GEIKEGYRANFTVIQFEDWRYSTKYSKVIETPLDGF---ELKASVYATIVQGKLAYLEGEVFPV 380 (392)
T ss_pred CccCCCCccCEEEEeCCceeEccccccCCCCCCCCC---EeeeEEEEEEECCEEEEECCeEecC
Confidence 889999999999999985432111 1122211 1235899999999999999998743
No 97
>COG3653 N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.92 E-value=5.1e-24 Score=192.16 Aligned_cols=93 Identities=23% Similarity=0.267 Sum_probs=67.7
Q ss_pred CCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCC-CcCC---hhhhhhhccCCCCeeEEEEccEEEE
Q 011766 379 ALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV-PVHD---RITSLVYCMRTENVVSVMCNGQWVM 454 (478)
Q Consensus 379 ~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~-~~~d---~~~~~~~~~~~~~v~~v~v~G~~v~ 454 (478)
-+|++.|++.+|..+|+.+||.+ .|.|++|+.|||+|+|++..... +..+ |.....+...+.++..|.|+|.+.+
T Consensus 473 ~l~Le~av~rmT~~~Ae~~GL~d-rGlvreG~rADl~viDp~~vr~~a~y~~~~lPa~G~~~~~vn~~~vat~v~Gvvs~ 551 (579)
T COG3653 473 LLSLERAVRRMTGELAEWFGLGD-RGLVREGDRADLVVIDPHLVRDVATYTEPALPAYGILRVMVNRNVVATGVGGVVSF 551 (579)
T ss_pred cccHHHHHHHHhccHHHHhCccc-ccccccccccceEEEccccccccccccCccCCCCcceEEEEeccceeeecceeEEE
Confidence 49999999999999999999965 69999999999999999744322 1111 1111111112233444444499999
Q ss_pred ECCeeec-ccHHHHHHHHH
Q 011766 455 KNKKILL-LMRGRLFQLQD 472 (478)
Q Consensus 455 ~~g~~~~-~~~~~~~~~~~ 472 (478)
++|++++ ++.|+++|..-
T Consensus 552 rdGe~tg~~~aGR~lR~g~ 570 (579)
T COG3653 552 RDGEFTGQVKAGRYLRAGE 570 (579)
T ss_pred ecCcccCcccccchhcccc
Confidence 9999999 69999998643
No 98
>COG1229 FwdA Formylmethanofuran dehydrogenase subunit A [Energy production and conversion]
Probab=99.92 E-value=1.9e-23 Score=187.07 Aligned_cols=85 Identities=21% Similarity=0.241 Sum_probs=71.7
Q ss_pred CCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECC
Q 011766 378 AALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNK 457 (478)
Q Consensus 378 ~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g 457 (478)
..+++.|...+.-++|||.+|+.+++|.|.+|.+||+.|+|-+|.+..|..| +..+...+ ..-.+|+++|++|+++|
T Consensus 436 rE~t~~eia~~TRa~~ak~lgl~e~kGhLg~GadadIaiYdlnP~~vDps~d-ye~v~kaf--~~A~ytlK~GeIvvkdG 512 (575)
T COG1229 436 RELTLYELAIMTRANPAKVLGLSERKGHLGVGADADIAIYDLNPEQVDPSND-YEKVEKAF--RKAAYTLKGGEIVVKDG 512 (575)
T ss_pred ccccHHHHHHHHhcChhhhcccccccCccCcCccCceEEEecChhhcCCccc-HHHHHHHH--hheeEEecCceEEEecc
Confidence 4589999999999999999999999999999999999999999888877665 33222211 57899999999999999
Q ss_pred eeecccHH
Q 011766 458 KILLLMRG 465 (478)
Q Consensus 458 ~~~~~~~~ 465 (478)
+++....|
T Consensus 513 eiv~~p~g 520 (575)
T COG1229 513 EIVAEPEG 520 (575)
T ss_pred eEEecccC
Confidence 99876655
No 99
>PF01979 Amidohydro_1: Amidohydrolase family; InterPro: IPR006680 This group of enzymes represents a large metal dependent hydrolase superfamily []. The family includes adenine deaminase (3.5.4.2 from EC) that hydrolyses adenine to form hypoxanthine and ammonia. The adenine deaminase reaction is important for adenine utilization as a purine and also as a nitrogen source []. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases (3.5.1.25 from EC). These enzymes catalyse the reaction: N-acetyl-D-glucosamine 6-phosphate + H2O = D-glucosamine 6-phosphate + acetateThis family includes dihydroorotase and urease which belong to MEROPS peptidase family M38 (beta-aspartyl dipeptidase, clan MJ), where they are classified as non-peptidase homologs. ; GO: 0016787 hydrolase activity; PDB: 1O12_A 2KAU_C 1FWD_C 1A5M_C 1FWC_C 1FWI_C 1EJV_C 1FWH_C 1A5L_C 1KRA_C ....
Probab=99.92 E-value=7.1e-25 Score=209.68 Aligned_cols=290 Identities=26% Similarity=0.345 Sum_probs=177.1
Q ss_pred EEeecccccccccchhhhccccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCHHH----
Q 011766 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSE---- 152 (478)
Q Consensus 77 ~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~---- 152 (478)
+|+|||||+|+|+.++...+. +..+..+........+++++||||+++++......
T Consensus 1 ~v~PGlID~H~H~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~ 60 (333)
T PF01979_consen 1 YVMPGLIDAHVHGGQGGLRGL--------------------LDPEDHYESIRTGAKAALKGGVTTVLDTPHTSPNPDIEL 60 (333)
T ss_dssp EEEE-EEEEEEEGGGTTHTTS--------------------SSHHHHHHHHHHHHHHHHHTTEEEEEEEEESSHCHHHHH
T ss_pred CEEcChhHHhhCcCCcCcccc--------------------CCHHHHHHHHHHHHHHHHhcCeEEEEcCcccCCcccccc
Confidence 699999999999976544431 44556677777888999999999999984222111
Q ss_pred ---HHHHHHH-hCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCC--CCCeEEEEec
Q 011766 153 ---MAKAVEL-LGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAA--DGRIRIWFGI 226 (478)
Q Consensus 153 ---~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 226 (478)
..+.... ..+..... .+.....+....+.......... ....+...+..+.+....... ...+......
T Consensus 61 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (333)
T PF01979_consen 61 RNEIMEGLAAAPKIEPAMT-LLGTGSVGGHGEGPNEPPDKNGP----HDEAFEGEDFIKFIEEAGSEIKRIDGVIPAISP 135 (333)
T ss_dssp HHHHHHHHHHHHHHEEEEE-EEEECECSEEEECHHHHHHHHSE----HHHHHHHHHHHHHHHHHTTTCEEEECEEEEEEH
T ss_pred ccccccccccchhhhcccc-ccccccccccccccccccccccC----CchhhhHHHHHHHhhhhhhhhcccccccccccc
Confidence 1111111 11111100 00000000000000000000000 000000001223333332221 1134444666
Q ss_pred cccccCCHHHHHHHHHHHHH-----c-CCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCC-----CCCeeeeeec
Q 011766 227 RQIMNATDRLLLETRDMARE-----F-KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFL-----QNNLLSAHTV 295 (478)
Q Consensus 227 ~~~~~~~~~~l~~~~~~a~~-----~-~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~i~h~~ 295 (478)
+....++.+.+...++.+++ . +.++++|+.+............ ....++.+...+.+ ....++.|+.
T Consensus 136 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 213 (333)
T PF01979_consen 136 HNPYTVSDEELREAVELAKEFLAAEKLGIPVHIHVAEGTGEVEAMTHLY--GMSPIEALDHLGLLEEAIDDGVDLIAHGT 213 (333)
T ss_dssp HTTTTSCHHHHHHHHHHHHHHHHHHHHTHEEEEEESSSHHHHCCCHHHH--SHHHHHHHHHHHSCHHHHHHHCEEEEEHT
T ss_pred cccccchhhhhhhHHhhhhhHHHHHhhcccceeeeccCcccceeEeeee--eccchhhhccchhhhhhcccccceeeccc
Confidence 77788899989999999988 3 9999999998776633322222 22244445544555 4567899999
Q ss_pred cCChhHHHHHHhcCCeEEECccchhh--------------------c-cCCCcHHHHHHC-CCcEEEcCCCCCCCCCcCH
Q 011766 296 WVNHTEIGLLSRAGVKVSHCPASAMR--------------------M-LGFAPIKEMLHA-DICVSLGTDGAPSNNRMSI 353 (478)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~p~~~~~--------------------~-~~~~~~~~~~~~-gv~v~~gsD~~~~~~~~~~ 353 (478)
++++++++++++.+..+..||..+.. . ....+...+++. |+. +|||+..
T Consensus 214 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~--lgtDg~~------- 284 (333)
T PF01979_consen 214 HLSDEEIELLKETGIGIIHCPISNDSAPHKPGKAIMMDGTAEGIYGLGSGGAPLFRMLDKMGVN--LGTDGVA------- 284 (333)
T ss_dssp TSEHHHHHHHHHHTHEEEEEHHHHHHHHHHTTHHSETTBSBTSBSCTTHHHHHHHHHHHCTTHE--ETTCTTC-------
T ss_pred cCCHHHhhhhhccCCccccccchhhhhccccccccccchhccccccccccccchhhhhhhcccc--ccccccc-------
Confidence 99999999999999999999988765 1 122345566666 888 9999321
Q ss_pred HHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEc
Q 011766 354 VDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVD 418 (478)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d 418 (478)
++|+..... +++++++++++|.|||+++|+++++|+|++||+|||||||
T Consensus 285 -~~l~~~~~~---------------~~~~~~~l~~aT~n~Ak~lg~~~~~G~i~~G~~ADlvv~D 333 (333)
T PF01979_consen 285 -EELKLFVRL---------------GISPEEALKMATINPAKILGLDDDKGSIEPGKDADLVVLD 333 (333)
T ss_dssp -HHHHHHHHH---------------HSHHHHHHHHHTHHHHHHTTSTTTSSSSSTTSB--EEEEE
T ss_pred -ccccccccc---------------cccccccccccchhHHHHcCCCCCEEEeCcCCCcCEEEeC
Confidence 566655533 3899999999999999999999999999999999999997
No 100
>cd01295 AdeC Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine. This reaction is part of one of the adenine salvage pathways, as well as the degradation pathway. It is important for adenine utilization as a purine, as well as a nitrogen source in bacteria and archea.
Probab=99.90 E-value=1.9e-21 Score=189.91 Aligned_cols=173 Identities=20% Similarity=0.297 Sum_probs=112.0
Q ss_pred CHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeE
Q 011766 233 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKV 312 (478)
Q Consensus 233 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~ 312 (478)
.++.+.+.++.+++.++++..|+...... . ...++. .+. ...|.....++.++++ +.|..+
T Consensus 119 ~~~~l~~~i~~A~~~g~~v~~Ha~g~~~~--~----------L~a~l~-aGi-----~~dH~~~~~eea~e~l-~~G~~i 179 (422)
T cd01295 119 GDDEMLAKIQAAKKAGKPVDGHAPGLSGE--E----------LNAYMA-AGI-----STDHEAMTGEEALEKL-RLGMYV 179 (422)
T ss_pred CcHHHHHHHHHHHhCCCEEEEeCCCCCHH--H----------HHHHHH-cCC-----CCCcCCCcHHHHHHHH-HCCCEE
Confidence 55678888899999999999999765421 0 011111 221 1247676666666665 789988
Q ss_pred EECccchhhccCCCcHHHHHH--CCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHh
Q 011766 313 SHCPASAMRMLGFAPIKEMLH--ADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMAT 390 (478)
Q Consensus 313 ~~~p~~~~~~~~~~~~~~~~~--~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T 390 (478)
.+.+.+.... ...+...+. .+.+++++||.+.. . ++............ . ...++++++|++++|
T Consensus 180 ~i~~g~~~~~--~~~~~~~l~~~~~~~i~l~TD~~~~-~--~~~~~g~~~~v~r~---a------~~~g~s~~eal~~aT 245 (422)
T cd01295 180 MLREGSIAKN--LEALLPAITEKNFRRFMFCTDDVHP-D--DLLSEGHLDYIVRR---A------IEAGIPPEDAIQMAT 245 (422)
T ss_pred EEECcccHhh--HHHHHHhhhhccCCeEEEEcCCCCc-h--hhhhcchHHHHHHH---H------HHcCCCHHHHHHHHh
Confidence 8776543110 111112222 47899999998532 1 11100011111100 0 013699999999999
Q ss_pred HHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECC
Q 011766 391 INGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNK 457 (478)
Q Consensus 391 ~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g 457 (478)
.|||+.+++ +++|+|++|+.|||++++.. ...++..||++|+.||+.-
T Consensus 246 ~n~A~~~gl-~~~G~i~~G~~AD~vv~~~~------------------~~~~v~~v~~~G~~v~~r~ 293 (422)
T cd01295 246 INPAECYGL-HDLGAIAPGRIADIVILDDL------------------ENFNITTVLAKGIAVVERH 293 (422)
T ss_pred HHHHHHcCC-CCCcccCCCCcCCEEEECCC------------------CCCceEEEEECCeEEEEec
Confidence 999999999 66899999999999999852 1258999999999998643
No 101
>COG0804 UreC Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism]
Probab=99.88 E-value=1.2e-21 Score=175.33 Aligned_cols=332 Identities=19% Similarity=0.189 Sum_probs=195.8
Q ss_pred CccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhh-----hhccCCCeEEeCCCCEEeecccccccccc
Q 011766 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-----QFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (478)
Q Consensus 16 ~~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~-----~~~~~~~~viD~~G~~v~PGfID~H~H~~ 90 (478)
..-.|++|.|+.|++.. -+.++||.|+||||+.||+...-.. -+-+...++|-++|++|..|-||+|+|+.
T Consensus 64 ~~~~D~VITNa~IiD~~----Gi~KADiGikdGrI~~IGKaGNPd~~dgV~iiiG~sTe~iagEg~I~TAGGiDtHiHfI 139 (568)
T COG0804 64 AGALDLVITNALIIDYW----GIVKADIGIKDGRIAGIGKAGNPDIMDGVTIIIGPSTEIIAGEGKIVTAGGIDTHIHFI 139 (568)
T ss_pred cCcccEEEeeeEEEecc----ceEEeecccccceEEEeecCCCCCccCCceEEeccccceecCCceEEeeccccceeEEe
Confidence 45579999999999752 2467899999999999998542110 11234668999999999999999999982
Q ss_pred hhhhccccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCc------------cCHH---HHHH
Q 011766 91 QQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG------------QHVS---EMAK 155 (478)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~------------~~~~---~~~~ 155 (478)
- .+.+.+++.+||||+...|. ...+ .+++
T Consensus 140 ~------------------------------------Pqqi~~Al~sGiTtmiGGGtGpa~Gt~aTT~TpG~w~i~rMl~ 183 (568)
T COG0804 140 C------------------------------------PQQIEEALASGITTMIGGGTGPADGTNATTCTPGPWHIARMLQ 183 (568)
T ss_pred c------------------------------------HHHHHHHHhcCcEEEecCccCCCCCcccccccCCHHHHHHHHH
Confidence 1 22345689999999986431 1122 3334
Q ss_pred HHHHhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHH
Q 011766 156 AVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDR 235 (478)
Q Consensus 156 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (478)
.++...+..-+ . +.+-. .....+.+....+.-. +..|+.+..++.
T Consensus 184 a~d~~p~N~g~----l--gKGn~-------------------------s~~~~L~Eqi~aGa~G----lKlHEDWG~Tpa 228 (568)
T COG0804 184 AADGLPMNIGF----L--GKGNA-------------------------SNPAPLAEQIEAGAIG----LKLHEDWGATPA 228 (568)
T ss_pred hhhcCceeeEE----e--ecCCC-------------------------CCchhHHHHHhhccce----eEeecccCCCHH
Confidence 33333332211 1 11100 0111122222322222 556888888999
Q ss_pred HHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccC-------ChhHHHHHHhc
Q 011766 236 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV-------NHTEIGLLSRA 308 (478)
Q Consensus 236 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~-------~~~~~~~~~~~ 308 (478)
.+..++..|.+++++|.+|............ .+. .+..|. .|..|. .|+.++.+...
T Consensus 229 aI~~~L~VAD~~DvqVaiHtDTLNEsGfvEd-----------Ti~---A~~gRt--IHtyHtEGAGGGHAPDiikv~~~~ 292 (568)
T COG0804 229 AIDTCLSVADEYDVQVAIHTDTLNESGFVED-----------TIA---AIKGRT--IHTYHTEGAGGGHAPDIIKVAGQP 292 (568)
T ss_pred HHHHHHhhhhhhceEEEEeecccccccchHh-----------HHH---HhcCce--eEEeeccCCCCCCccHHHHHccCC
Confidence 9999999999999999999864322111000 011 111111 121111 12333333222
Q ss_pred CCe-EEECcc--------------------ch-------------hhccCCCcHHHHHHCCCcEEEcCCCCCCCCCcC-H
Q 011766 309 GVK-VSHCPA--------------------SA-------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMS-I 353 (478)
Q Consensus 309 ~~~-~~~~p~--------------------~~-------------~~~~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~-~ 353 (478)
++- -++.|+ .+ .|...+..-.-|.+-|+.-.++||+-+.+.-.. .
T Consensus 293 NvLPsSTNPT~PytvNT~~EhlDMlMVcHhL~p~ipeDvaFAeSRIR~eTIAAEdiLhDmGafSmisSDSQAMGRvGEvi 372 (568)
T COG0804 293 NVLPSSTNPTRPYTVNTIDEHLDMLMVCHHLDPRIPEDVAFAESRIRPETIAAEDILHDMGAFSMISSDSQAMGRVGEVI 372 (568)
T ss_pred CcCcCCCCCCCCcccccHHHhhhhhhhhccCCCCCcchhhhhhhccchhhhhHHHHHhhccceEEeccchHhhhccchhh
Confidence 221 111111 00 011112222356788999999999865433222 2
Q ss_pred HHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhh
Q 011766 354 VDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITS 433 (478)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~ 433 (478)
.+.++.+......+..+..-....-.+-...-+..+|.|||-..|+++.+|++++||.||||+|++--|
T Consensus 373 ~RtwQtA~kmK~qrG~L~~d~~~nDN~RvkRYiaKyTINPAIthGis~~vGSvEvGK~ADlVLW~PaFF----------- 441 (568)
T COG0804 373 TRTWQTADKMKKQRGALPEDAGGNDNFRVKRYIAKYTINPAITHGISHEVGSVEVGKLADLVLWDPAFF----------- 441 (568)
T ss_pred hhHHHHHHHHHHhcCCCCCCCCCCccHHHhhhhhheecCHHHhcccchhccceeccceeeeeeechhhc-----------
Confidence 233444444443333322211112235678889999999999999999999999999999999998633
Q ss_pred hhhccCCCCeeEEEEccEEEEE
Q 011766 434 LVYCMRTENVVSVMCNGQWVMK 455 (478)
Q Consensus 434 ~~~~~~~~~v~~v~v~G~~v~~ 455 (478)
.-++..|+++|-+.+.
T Consensus 442 ------GvKP~~vlkgG~ia~a 457 (568)
T COG0804 442 ------GVKPELVLKGGMIAWA 457 (568)
T ss_pred ------CCCcceEEecceeeee
Confidence 3588899999988764
No 102
>cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.
Probab=99.87 E-value=1.2e-21 Score=188.77 Aligned_cols=164 Identities=16% Similarity=0.161 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEE
Q 011766 235 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 314 (478)
Q Consensus 235 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~ 314 (478)
+.+.++++++++.+++++++..........+ ......+......+..|...++++++.. .+....+
T Consensus 172 ~~v~~~~~la~~~~~~i~i~h~ss~~~l~~i-----------~~~~~~G~~~~~e~~~h~L~ld~~~~~~---~~~~~k~ 237 (374)
T cd01317 172 IMVARDLELAEATGARVHFQHLSTARSLELI-----------RKAKAKGLPVTAEVTPHHLLLDDEALES---YDTNAKV 237 (374)
T ss_pred HHHHHHHHHHHHhCCcEEEEeCCCHHHHHHH-----------HHHHHCCCCEEEEecHHHHhcCHHHHhc---cCCceEE
Confidence 3677889999999999998554443322221 1122223333334556888888887643 4666677
Q ss_pred CccchhhccCCCcHHHHHHCCCcEEEcCCCCCCCCCcC---HHH--------HHHHHHHHhcccccccCCCCCCCCCCHH
Q 011766 315 CPASAMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMS---IVD--------EMYLASLINKGREVFANGTTDPAALPAE 383 (478)
Q Consensus 315 ~p~~~~~~~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~---~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ls~~ 383 (478)
+|...-. .+..++.++++.|+.+++|||+.++..... ++. ++.+..+..... ....+|++
T Consensus 238 ~Pplr~~-~~~~~l~~~~~~G~i~~igsDh~p~~~~~k~~~~~~~~~Gi~g~e~~l~~~~~~~~--------~~~~~~~~ 308 (374)
T cd01317 238 NPPLRSE-EDREALIEALKDGTIDAIASDHAPHTDEEKDLPFAEAPPGIIGLETALPLLWTLLV--------KGGLLTLP 308 (374)
T ss_pred cCCCCCH-HHHHHHHHHHhcCCceEEEcCCCCCCHHHccCCHhhCCCcHhHHHHHHHHHHHHHH--------HcCCCCHH
Confidence 7753211 346788899999999999999988743322 111 333333222111 12358999
Q ss_pred HHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCC
Q 011766 384 TVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWP 423 (478)
Q Consensus 384 ~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~ 423 (478)
++++++|.|||+++|+. .|+|++|++|||+++|.+..+
T Consensus 309 ~~~~~~t~npA~~lgl~--~G~l~~G~~ADlvi~d~~~~~ 346 (374)
T cd01317 309 DLIRALSTNPAKILGLP--PGRLEVGAPADLVLFDPDAEW 346 (374)
T ss_pred HHHHHHHHHHHHHhCCC--CCcccCCCcCCEEEECCCCCE
Confidence 99999999999999995 399999999999999987443
No 103
>KOG3892 consensus N-acetyl-glucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=99.86 E-value=4.6e-21 Score=162.90 Aligned_cols=357 Identities=16% Similarity=0.171 Sum_probs=184.7
Q ss_pred eeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccC
Q 011766 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (478)
Q Consensus 20 ~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~ 99 (478)
-+.|.|++|+.. ..+...+++|++|||..-.+ +--+.-..+++.|||.|.++.|||||.....++
T Consensus 13 llQFtNCrilR~----g~l~~edlWVR~GRIldpe~---vFFeErt~Ad~riDCgG~IlaPGfIDlQiNGGf-------- 77 (407)
T KOG3892|consen 13 LLQFTNCRILRG----GKLLREDLWVRGGRILDPEK---VFFEERTVADERIDCGGRILAPGFIDLQINGGF-------- 77 (407)
T ss_pred eeeeeeeEEeeC----CceeehheeEeCCeecCccc---ccceeccchhheeccCCeeecCceEEEEecCcc--------
Confidence 357889999963 23455699999999975332 111011135678999999999999999988743
Q ss_pred CCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCHHHHHHHH------HHhCCeEEEecccccC
Q 011766 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAV------ELLGLRACLVQSTMDC 173 (478)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~~ 173 (478)
+..-+...++........+++++++|+|+++......+.+..... ...+.+..--......
T Consensus 78 -------------GvDFS~dte~~~eGvAlVAr~ll~hGvtsf~Pt~~tsp~~~YHkilP~ip~~~~~p~GaG~LG~HlE 144 (407)
T KOG3892|consen 78 -------------GVDFSQDTEDVGEGVALVARQLLSHGVTSFCPTLVTSPPEVYHKILPQIPVKSGGPHGAGVLGLHLE 144 (407)
T ss_pred -------------ccccccchhhhhhhHHHHHHHHHhcCCCcCCCccccCCchhhhhhccccccccCCCCccceeeeecc
Confidence 222233444444555667788999999998874322222211111 1111111111112223
Q ss_pred CCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeE
Q 011766 174 GEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHM 253 (478)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~ 253 (478)
|+.++...+....+.++. .+.......+...+.+. .++++. .+.....-.+|.+..+ ...|.-+..
T Consensus 145 GPFIs~~KrG~HPE~~i~-------s~~~~~~~~l~~tYGsl--eni~Iv-TlAPEl~~~~evi~~l----v~~gitVsl 210 (407)
T KOG3892|consen 145 GPFISREKRGAHPEAHIR-------SFEADAFQDLLATYGSL--ENIRIV-TLAPELGGAQEVIRAL----VARGITVSL 210 (407)
T ss_pred CCccChhhcCCCHHHHHh-------ccCccHHHHHHHHhCCc--cceEEE-EecccccCcHHHHHHH----HhcceEEee
Confidence 333433333333333222 11111233333343333 345543 2322222234444443 334444443
Q ss_pred -eccCChhhhH-HHhhhcCCCCchH-HHHhhhCCC-----------------CCC----eeeeeeccCChhHHHHHHhcC
Q 011766 254 -HVAEIPYENQ-VVMDTRKVDHGTV-TFLDKIEFL-----------------QNN----LLSAHTVWVNHTEIGLLSRAG 309 (478)
Q Consensus 254 -H~~~~~~~~~-~~~~~~~~~~~~~-~~l~~~~~~-----------------~~~----~~i~h~~~~~~~~~~~~~~~~ 309 (478)
|........+ .+.. +...+ ..++++-.. ..+ -+|+.+.+..+..++.+.+.+
T Consensus 211 GHS~A~L~~gE~AV~s----Gat~ITHLFNAMlpfHHRDPGlvGLLtSd~lp~gr~iyyGiIsDG~HThpaALRIAyrth 286 (407)
T KOG3892|consen 211 GHSVADLRAGEDAVWS----GATFITHLFNAMLPFHHRDPGLVGLLTSDRLPAGRCIYYGIISDGTHTHPAALRIAYRTH 286 (407)
T ss_pred ccchhccCcHHHHHhc----cchHHHHHHHhccccccCCCceeEEeecCCCCCCCeEEEEEecCCccCChhHhhhhhhcC
Confidence 3322221111 1110 00112 233332111 112 267888888888888776654
Q ss_pred CeEEECccchhhccCCCcHHHHH------HCCC-cEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCH
Q 011766 310 VKVSHCPASAMRMLGFAPIKEML------HADI-CVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPA 382 (478)
Q Consensus 310 ~~~~~~p~~~~~~~~~~~~~~~~------~~gv-~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~ 382 (478)
-.-.+..+......++.+-..-+ -.|. ...-||..... +. .+|...... ++.+.+.|.
T Consensus 287 pqGLvLVTDAI~ALGl~~GvH~lGqq~v~Vkgl~A~~aGT~Tl~G--Si---ApMd~CvRh----------f~kATgCs~ 351 (407)
T KOG3892|consen 287 PQGLVLVTDAIPALGLGNGVHTLGQQEVEVKGLTAYVAGTKTLSG--SI---APMDVCVRH----------FLKATGCSM 351 (407)
T ss_pred CCceEEEecchhhcccccccccccceeEEEcceEEEeeccccccc--cc---cCcHHHHHH----------HHHhcCCcH
Confidence 33222222222221111111000 0111 11123332111 11 112111111 112347999
Q ss_pred HHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECC
Q 011766 383 ETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNK 457 (478)
Q Consensus 383 ~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g 457 (478)
+-|++++|..||+.||+++.+|+|..|.+||||++|.+ ..|..+|+.|+.|++..
T Consensus 352 e~AleaAtlhPAqlLg~ek~KGTLDfG~dADFVllDd~--------------------l~V~aT~isG~~V~~a~ 406 (407)
T KOG3892|consen 352 ESALEAATLHPAQLLGLEKSKGTLDFGADADFVLLDDS--------------------LHVQATYISGELVWQAD 406 (407)
T ss_pred HHHHhhhccChHHhhccccccccccccccCceEEEccc--------------------eEEEEEEEccEEEEecc
Confidence 99999999999999999999999999999999999986 68999999999998753
No 104
>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ]. Also included in this superfamily are the phopshotriesterase enzymes, which hydrolyse P-O bonds. Members participate in a large number of processes including nucleotide metabolism, detoxification and neuronal development. They use a variety of divalent metal cofactors for catalysis: for example adenosine deaminase binds a single zinc ion, phopsphotriesterase binds two, while urease binds nickel. It has been postulated that since some of these proteins, such as those some of those involved in neuronal devlopment, appear to have lost their metal-binding centres, their function may simply be to bind, but not hydrolyse, their target molecules. This entry represents a subset of amidohydrolase domains that participate in different functions including cytosine degradation, atrazine degradation and other metabolic processes. The structure of the domain from Escherichia coli has been studied, and like other amidohydrolases it forms a classical alpha-beta TIM-barrel fold []. The active site is located in the mouth of the enzyme barrel and contains a bound iron ion that coordinates a hydroxyl nucleophile. Substrate binding involves a significant conformational change that sequesters the reaction complex from solvent.; PDB: 4F0R_A 4F0S_A 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A ....
Probab=99.86 E-value=4.6e-21 Score=188.07 Aligned_cols=177 Identities=23% Similarity=0.225 Sum_probs=126.6
Q ss_pred EeccccccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHH
Q 011766 224 FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIG 303 (478)
Q Consensus 224 ~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~ 303 (478)
...+.....+++.+.++++.+++.|+++.+|+.++......+ ..+.... .+..+.|+..+++++++
T Consensus 214 ~~~~g~~~~~~~~l~~~v~~a~~~g~~v~vHa~gd~a~~~~l-----------~a~~~~~---~~~~i~h~~~~~~~~~~ 279 (404)
T PF07969_consen 214 VHISGLPSFDPEELEELVRAAREAGLQVAVHAIGDRAIDEAL-----------DAIEAAR---ARGRIEHAELIDPDDIE 279 (404)
T ss_dssp EEETC--SSSHHHHHHHHHHHHHCT-EEEEEEESHHHHHHHH-----------HHHHHHT---CCHEEEEHCBCCHHHHH
T ss_pred ccccccccccchhHHHHHHHHHhcCCeeEEEEcCCchHHhHH-----------HHHHhhc---ccceeeccccCCHHHHH
Confidence 344555667777799999999999999999997765543321 2222221 22268999999999999
Q ss_pred HHHhcCCeEEECccch--------------hhccCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhccccc
Q 011766 304 LLSRAGVKVSHCPASA--------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREV 369 (478)
Q Consensus 304 ~~~~~~~~~~~~p~~~--------------~~~~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (478)
++++.++.+.++|... .+.....+++.+++.|++++++||++. ...+++..+..+.........
T Consensus 280 ~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gsD~p~--~~~~P~~~~~~~~~~~~~~~~ 357 (404)
T PF07969_consen 280 RMAELGVTASVQPHFLFSWGGEWYEERLGPERARRIYPIRSLLDAGVRVALGSDAPV--SPPNPFRGIWAAVTRQMAGER 357 (404)
T ss_dssp HHHHHTTEEEECCTHHHHETEETHHHHHHHHCGGGBTHHHHHHHCTTEEEE--TTTT--SSCCHHHHHHHHHHHHHCHHT
T ss_pred HHHHhCCccccChhHhhhccchhhhhhhhhHHHHHHhHHHHHHhccCceecCcCCcc--cccCcchhhhhhhcccccccc
Confidence 9999999999999211 122456899999999999999999865 345677777766655443211
Q ss_pred ccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEE
Q 011766 370 FANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVV 416 (478)
Q Consensus 370 ~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv 416 (478)
.......++.+|++|||+++|++||+.+|+++++|+|++||.|||||
T Consensus 358 ~~~~~~~~~~ls~~eAl~~~T~~~A~~~g~~~~~Gsl~~Gk~AD~vV 404 (404)
T PF07969_consen 358 SGPVLGPEQRLSLEEALRAYTSNPARALGLEDRKGSLEPGKLADFVV 404 (404)
T ss_dssp HHHCCGGTGSSHHHHHHHHTTHHHHHHTT-TTTSSSSSTTSBS-EEE
T ss_pred ccccccccccCCHHHHHHHHhHHHHHHcCCCCCcceECCCCCcCeEC
Confidence 11111223579999999999999999999999899999999999997
No 105
>cd01318 DHOase_IIb Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This group contains the archeal members of the DHOase family.
Probab=99.85 E-value=6.3e-20 Score=174.79 Aligned_cols=177 Identities=19% Similarity=0.170 Sum_probs=106.3
Q ss_pred CCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhh--hc---CCCCc-------hHHHHhhhCCCCCCeeeeeeccCCh
Q 011766 232 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD--TR---KVDHG-------TVTFLDKIEFLQNNLLSAHTVWVNH 299 (478)
Q Consensus 232 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~--~~---~~~~~-------~~~~l~~~~~~~~~~~i~h~~~~~~ 299 (478)
.+...+.++++.+. ..+.+|+.+..-....... .. ..... ....+.-....+.+..+.|.+. .
T Consensus 108 ~~~~~l~~~~~~~~---~~v~~H~E~~~l~~~~~~~~~~~~~~~~~~P~~aE~~av~r~~~la~~~~~~~hi~Hvs~--~ 182 (361)
T cd01318 108 DDEETLERIFAEGS---VLVTFHAEDEDRLRENRKELKGESAHPRIRDAEAAAVATARALKLARRHGARLHICHVST--P 182 (361)
T ss_pred CCHHHHHHHHHhcC---CeEEEeCCChHHHHHHHhhhhhccCCCCcCCHHHHHHHHHHHHHHHHHHCCCEEEEeCCC--H
Confidence 45666776666653 6788999764321111110 00 00000 0112222333456777777775 4
Q ss_pred hHHHHHHhc--CCeEEECccchhhc-----------cCCCcHH---------HHHHCCCcEEEcCCCCCCCCC-------
Q 011766 300 TEIGLLSRA--GVKVSHCPASAMRM-----------LGFAPIK---------EMLHADICVSLGTDGAPSNNR------- 350 (478)
Q Consensus 300 ~~~~~~~~~--~~~~~~~p~~~~~~-----------~~~~~~~---------~~~~~gv~v~~gsD~~~~~~~------- 350 (478)
+.++++++. ++.+.+||.+.... .-.+|+| +.++.|...+++||+.|....
T Consensus 183 ~~~~~i~~~k~~vt~ev~ph~L~l~~~~~~~~~~~~k~~PPlr~~~d~~aL~~~l~~G~id~i~SDh~P~~~~~k~~~~~ 262 (361)
T cd01318 183 EELKLIKKAKPGVTVEVTPHHLFLDVEDYDRLGTLGKVNPPLRSREDRKALLQALADGRIDVIASDHAPHTLEEKRKGYP 262 (361)
T ss_pred HHHHHHHHhCCCeEEEeCHHHhhcCHHHHhcCCCeEEEeCCCCCHHHHHHHHHHHhCCCCCEEeeCCCCCCHHHccCChh
Confidence 567777666 78899999853211 1123433 458899999999998765211
Q ss_pred -----cCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCC
Q 011766 351 -----MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPM 424 (478)
Q Consensus 351 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~ 424 (478)
..-.+.+ ...+.. .....+++++++++++|.|||+++|+.+ +|+|++|++|||+|+|++..+.
T Consensus 263 ~a~~G~~g~e~~-l~~~~~---------~v~~~~l~l~~a~~~~t~nPA~~lgl~~-~G~i~~G~~ADlvv~d~~~~~~ 330 (361)
T cd01318 263 AAPSGIPGVETA-LPLMLT---------LVNKGILSLSRVVRLTSHNPARIFGIKN-KGRIAEGYDADLTVVDLKEERT 330 (361)
T ss_pred hCCCCCccHHHH-HHHHHH---------HHHcCCCCHHHHHHHHhHHHHHHhCCCC-CCccCCCCcCCEEEEeCCCCEE
Confidence 0001111 111100 0112369999999999999999999954 7999999999999999985443
No 106
>PRK06886 hypothetical protein; Validated
Probab=99.84 E-value=1.1e-18 Score=162.01 Aligned_cols=272 Identities=18% Similarity=0.175 Sum_probs=176.7
Q ss_pred cccccccccchhhhcccc-----CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCc-------c
Q 011766 81 GFVNTHVHTSQQLAKGIA-----DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-------Q 148 (478)
Q Consensus 81 GfID~H~H~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~-------~ 148 (478)
||||+|+|++.....+.. ...++.+.+.. +......++.++.+......+..++.+|+|.++..-. .
T Consensus 21 gfv~~H~HlDk~~~~~~~~~~~~~~g~l~e~i~~-~~~~k~~~t~~dv~~Ra~~~l~~~~~~Gtt~iRtHvdvd~~~~l~ 99 (329)
T PRK06886 21 GWVNAHAHADRAFTMTPEKIAIYHYANLQQKWDL-VDEVKRNSTVEDYYARFSQAIELMISQGVTAFGTFVDIDPICEDR 99 (329)
T ss_pred CCccccccccccccCCCccccccCCCCHHHHHHH-HHHHhccCCHHHHHHHHHHHHHHHHHcCcccEeeeeccCCCcccc
Confidence 899999999876643321 23444444321 1122456777888888889999999999999886421 1
Q ss_pred CHHHHHHHHHHhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccc
Q 011766 149 HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQ 228 (478)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (478)
....+.+..+...-..-+....+. ..++ .. . ...+++++.... .+.+.. + ++.
T Consensus 100 ~~~a~~~~r~~~~~~idlq~vafP-q~g~----~~-------~------------~~~~l~~~al~~-advvGG-i-P~~ 152 (329)
T PRK06886 100 AIIAAHKAREVYKHDIILKFANQT-LKGV----IE-------P------------TAKKWFDIGSEM-VDMIGG-L-PYR 152 (329)
T ss_pred HHHHHHHHHHHhcCcceEEEEecC-hhhc----cC-------c------------cHHHHHHHHHHh-CCEEeC-c-cCC
Confidence 233344443433322222211111 0111 00 0 233444333222 122211 1 222
Q ss_pred ---cccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhH----
Q 011766 229 ---IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE---- 301 (478)
Q Consensus 229 ---~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~---- 301 (478)
....+.+.+..++++|+++|+++++|+.+........... ........+.. .+++++||+.++..+
T Consensus 153 ~~~~~~~~~e~l~~~~~lA~~~g~~Id~Hlde~~~~~~~~le~------l~~~~~~~Gl~-grV~~sH~~~L~~~~~~~~ 225 (329)
T PRK06886 153 DELDYGRGLEAMDILLDTAKSLGKMVHVHVDQFNTPKEKETEQ------LCDKTIEHGMQ-GRVVAIHGISIGAHSKEYR 225 (329)
T ss_pred cCCCCCCCHHHHHHHHHHHHHcCCCeEEeECCCCchhHHHHHH------HHHHHHHcCCC-CCEEEEEeccccCcChhhH
Confidence 1356788999999999999999999999865443222111 11122245655 479999999998764
Q ss_pred ---HHHHHhcCCeEEECccchhh----------ccCCCcHHHHHHCCCcEEEcCCCCCC----CCCcCHHHHHHHHHHHh
Q 011766 302 ---IGLLSRAGVKVSHCPASAMR----------MLGFAPIKEMLHADICVSLGTDGAPS----NNRMSIVDEMYLASLIN 364 (478)
Q Consensus 302 ---~~~~~~~~~~~~~~p~~~~~----------~~~~~~~~~~~~~gv~v~~gsD~~~~----~~~~~~~~~~~~~~~~~ 364 (478)
++++++.|+.++.||.+|+. ..+..|+++|+++||+|++|||+... .++.+|++.++.+....
T Consensus 226 ~~~i~~La~agi~Vv~~P~snl~l~~~~~~~p~~rGv~pv~eL~~aGV~V~lGtDnv~D~~~p~g~~Dmle~~~l~~~~~ 305 (329)
T PRK06886 226 YRLYQKMREADMMVIACPMAWIDSNRKEDLMPFHNALTPADEMIPEGITVALGTDNICDYMVPLCEGDMWQELSLLAAGC 305 (329)
T ss_pred HHHHHHHHHcCCeEEECchhhhhhccccccCcCCCCCCCHHHHHHCCCeEEEecCCCcccCCCCCCCCHHHHHHHHHHHc
Confidence 99999999999999998752 25789999999999999999998642 35689999998876543
Q ss_pred cccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 011766 365 KGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 400 (478)
Q Consensus 365 ~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~ 400 (478)
. ..+..++++++|.++|+.+|++
T Consensus 306 ~-------------~~~~~~~l~maT~~gAraLgl~ 328 (329)
T PRK06886 306 R-------------FYDLDEMVNIASINGRKVLGLE 328 (329)
T ss_pred C-------------CCCHHHHHHHHhhhHHHHhCCC
Confidence 2 1468999999999999999984
No 107
>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex. C-P lyase is thought to catalyze the direct cleavage of inactivated C-P bonds to yield inorganic phosphate and the corresponding hydrocarbons. It is responsible for cleavage of alkylphosphonates, which are utilized as sole phosphorus sources by many bacteria.
Probab=99.83 E-value=2.7e-18 Score=158.78 Aligned_cols=163 Identities=18% Similarity=0.233 Sum_probs=119.5
Q ss_pred CCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCe
Q 011766 232 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK 311 (478)
Q Consensus 232 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~ 311 (478)
.+.+.++++++.|++.|+++.+|........... ...+.. ++.|. .+.+.++.+++.|+.
T Consensus 160 ~~~~~~~~iv~~A~~~gl~vasH~d~~~~~v~~a--------------~~~Gv~----~~E~p--~t~e~a~~a~~~G~~ 219 (325)
T cd01306 160 YAPANRSELAALARARGIPLASHDDDTPEHVAEA--------------HELGVV----ISEFP--TTLEAAKAARELGLQ 219 (325)
T ss_pred cCHHHHHHHHHHHHHCCCcEEEecCCChHHHHHH--------------HHCCCe----eccCC--CCHHHHHHHHHCCCE
Confidence 4567899999999999999999997654322211 112211 12333 578899999999999
Q ss_pred EEECccchhhc---cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHH
Q 011766 312 VSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 388 (478)
Q Consensus 312 ~~~~p~~~~~~---~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~ 388 (478)
++.++...++. .+..+++++++.|+.++++||+.+. +++....... ...+++++++|++
T Consensus 220 vv~gapn~lrg~s~~g~~~~~~ll~~Gv~~al~SD~~p~----sll~~~~~la--------------~~~gl~l~eAl~~ 281 (325)
T cd01306 220 TLMGAPNVVRGGSHSGNVSARELAAHGLLDILSSDYVPA----SLLHAAFRLA--------------DLGGWSLPEAVAL 281 (325)
T ss_pred EEecCcccccCccccccHhHHHHHHCCCeEEEEcCCCcH----hHHHHHHHHH--------------HHcCCCHHHHHHH
Confidence 99887654443 3456889999999999999999643 2332221111 0135999999999
Q ss_pred HhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEcc
Q 011766 389 ATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNG 450 (478)
Q Consensus 389 ~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G 450 (478)
+|.|||+++|++ ++|+|++|+.||||+++.+. ....+..||++|
T Consensus 282 aT~nPA~~lGl~-d~G~I~~G~~ADlvvvd~~~-----------------~~p~v~~v~~~G 325 (325)
T cd01306 282 VSANPARAVGLT-DRGSIAPGKRADLILVDDMD-----------------GVPVVRTVWRGG 325 (325)
T ss_pred HhHHHHHHcCCC-CCCCcCCCCCCCEEEEeCCC-----------------CCCccceEEeCc
Confidence 999999999997 46999999999999999861 124788899887
No 108
>cd01302 Cyclic_amidohydrolases Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids. Allantoinases catalyze the degradation of purines, while dihydropyrimidinases and hydantoinases, a microbial counterpart of dihydropyrimidinase, are involved in pyrimidine degradation. Dihydroorotase participates in the de novo synthesis of pyrimidines.
Probab=99.83 E-value=2.5e-19 Score=169.73 Aligned_cols=179 Identities=20% Similarity=0.222 Sum_probs=110.9
Q ss_pred CCCCCCeEEEEeccc-c-ccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeee
Q 011766 214 HAADGRIRIWFGIRQ-I-MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLS 291 (478)
Q Consensus 214 ~~~~~~~~~~~~~~~-~-~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i 291 (478)
..+...++.+..... . ...+.+.+.+.++.+.+.|.++.+|+.. ...+... .+.+..+
T Consensus 92 ~~Gv~g~K~f~~~~~~~~~~~~~~~l~~~~~~~~~~g~~v~~H~Er-----------------~~~la~~---~g~~l~i 151 (337)
T cd01302 92 DAGINSLKVFMNYYFGELFDVDDGTLMRTFLEIASRGGPVMVHAER-----------------AAQLAEE---AGANVHI 151 (337)
T ss_pred HcCCcEEEEEEeccCCCccccCHHHHHHHHHHHHhcCCeEEEeHHH-----------------HHHHHHH---hCCcEEE
Confidence 334445665443211 1 1456778888888898899999999971 1222222 2345667
Q ss_pred eeeccCC-hhHHHHHHhcCC--eEEECccchhhc-----------c---------CCCcHHHHHHCCCcEEEcCCCCCCC
Q 011766 292 AHTVWVN-HTEIGLLSRAGV--KVSHCPASAMRM-----------L---------GFAPIKEMLHADICVSLGTDGAPSN 348 (478)
Q Consensus 292 ~h~~~~~-~~~~~~~~~~~~--~~~~~p~~~~~~-----------~---------~~~~~~~~~~~gv~v~~gsD~~~~~ 348 (478)
.|.+... -+.++.+++.|. .+.+||...... . ....+...+..|+..+++||+.+..
T Consensus 152 ~Hiss~~~le~i~~ak~~g~~vt~ev~ph~L~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~id~i~sDh~p~~ 231 (337)
T cd01302 152 AHVSSGEALELIKFAKNKGVKVTCEVCPHHLFLDESMLRLNGAWGKVNPPLRSKEDREALWEGVKNGKIDTIASDHAPHS 231 (337)
T ss_pred EeCCCHHHHHHHHHHHHCCCcEEEEcChhhheeCHHHhhCCCceEEEeCCCCCHHHHHHHHHHHhCCCCCEEecCCCCCC
Confidence 7766422 244555555554 456778753210 0 1123346778899999999998763
Q ss_pred CCc-----CHHH--------HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEE
Q 011766 349 NRM-----SIVD--------EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMV 415 (478)
Q Consensus 349 ~~~-----~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlv 415 (478)
... +++. +.....+.... .+.+++++++++++|.|||+++|+.+ .|+|++|++|||+
T Consensus 232 ~~~k~~~~~~~~a~~G~~g~e~~l~~~~~~~---------~~~~i~~~~~~~~~s~~pA~~~gl~~-~g~i~~G~~ADlv 301 (337)
T cd01302 232 KEEKESGKDIWKAPPGFPGLETRLPILLTEG---------VKRGLSLETLVEILSENPARIFGLYP-KGTIAVGYDADLV 301 (337)
T ss_pred HHHhccCCCcccCCCCcccHHHHHHHHHHHH---------HhcCCCHHHHHHHHHHHHHHHcCCCC-CCccccCCcCCEE
Confidence 110 1111 11122222111 12369999999999999999999965 5999999999999
Q ss_pred EEcCCCC
Q 011766 416 VVDPFSW 422 (478)
Q Consensus 416 v~d~~~~ 422 (478)
|+|.+..
T Consensus 302 i~d~~~~ 308 (337)
T cd01302 302 IVDPKKE 308 (337)
T ss_pred EEeCCCc
Confidence 9999843
No 109
>PF13147 Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2PUZ_B 2GOK_B 3HM7_E 3D6N_A 1XRT_A 1XRF_A 1YNY_B 1K1D_F ....
Probab=99.77 E-value=1.8e-18 Score=162.96 Aligned_cols=78 Identities=38% Similarity=0.526 Sum_probs=58.9
Q ss_pred CCCcHHHHHHCCCcEEEcCCCCCCC--CCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 011766 324 GFAPIKEMLHADICVSLGTDGAPSN--NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 401 (478)
Q Consensus 324 ~~~~~~~~~~~gv~v~~gsD~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~ 401 (478)
...+++.++++|++++++||+.+.. .+..++..+...... .|+|+++|++++|+|||++||+++
T Consensus 225 ~~~~~~~l~~~Gv~~~l~sD~~~~~~~~~~~~~~~~~~~~~~--------------~gl~~~~al~~~T~~pA~~lgl~~ 290 (304)
T PF13147_consen 225 DRAALRELLEAGVPVALGSDHAPSSTEGSGDLLHEAMRLAVR--------------AGLSPEEALRAATSNPARILGLDD 290 (304)
T ss_dssp HHHHHHHHHHTTSSEEEEE-BBTTTTTCTTTHHHHHHHHHHH--------------TSSTHHHHHHHHTHHHHHHTTBTT
T ss_pred hhHHHHHHHhCCCeEEEEcCCcccccccccccchhhhhHHhh--------------cCCCHHHHHHHHHHHHHHHhCCCC
Confidence 3456789999999999999997642 223344333222211 269999999999999999999988
Q ss_pred CccccccCccccEE
Q 011766 402 DIGSLEAGKKADMV 415 (478)
Q Consensus 402 ~~G~l~~G~~ADlv 415 (478)
++|+|++|++||||
T Consensus 291 ~~G~i~~G~~ADlv 304 (304)
T PF13147_consen 291 DKGSIAPGKDADLV 304 (304)
T ss_dssp TSSSTSTTSB-EEE
T ss_pred CCccCCCCCCCCcC
Confidence 89999999999997
No 110
>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others.
Probab=99.76 E-value=1.6e-16 Score=147.49 Aligned_cols=259 Identities=24% Similarity=0.343 Sum_probs=169.8
Q ss_pred ccccccccchhhhccccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC--------HHHH
Q 011766 82 FVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------VSEM 153 (478)
Q Consensus 82 fID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~--------~~~~ 153 (478)
|||+|+|+.....++......+ .| ....+.++.+........+++++|||++.+++... ....
T Consensus 1 ~ID~H~H~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~Gvttv~~~~~~~~~~~~~~~~~~~ 71 (275)
T cd01292 1 FIDTHVHLDGSALRGTRLNLEL-KE--------AEELSPEDLYEDTLRALEALLAGGVTTVVDMGSTPPPTTTKAAIEAV 71 (275)
T ss_pred CcccchhhHHHHHccCCCcccc-cc--------ccccCHHHHHHHHHHHHHHHHhcCceEEEeeEeecCccccchHHHHH
Confidence 7999999987665543321111 00 34455666677777888999999999999865322 2445
Q ss_pred HHHHHHh-CCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEecccccc-
Q 011766 154 AKAVELL-GLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMN- 231 (478)
Q Consensus 154 ~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 231 (478)
.+..... |++............ .. .....+ ...+.+.+....+... +..+....
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~----~~----~~~~~~------------~~~~~i~~~~~~~~~g----i~~~~~~~~ 127 (275)
T cd01292 72 AEAARASAGIRVVLGLGIPGVPA----AV----DEDAEA------------LLLELLRRGLELGAVG----LKLAGPYTA 127 (275)
T ss_pred HHHHHHhcCeeeEEeccCCCCcc----cc----chhHHH------------HHHHHHHHHHhcCCee----EeeCCCCCC
Confidence 5555655 666655433322110 00 001111 2333344432211222 23333333
Q ss_pred --CCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcC
Q 011766 232 --ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAG 309 (478)
Q Consensus 232 --~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~ 309 (478)
.+.+.+.++++.++++++++.+|+.+.... .......++.... ..+.++.|+..++++.++++++.|
T Consensus 128 ~~~~~~~~~~~~~~a~~~~~~i~~H~~~~~~~----------~~~~~~~~~~~~~-~~~~~~~H~~~~~~~~~~~~~~~g 196 (275)
T cd01292 128 TGLSDESLRRVLEEARKLGLPVVIHAGELPDP----------TRALEDLVALLRL-GGRVVIGHVSHLDPELLELLKEAG 196 (275)
T ss_pred CCCCcHHHHHHHHHHHHcCCeEEEeeCCcccC----------ccCHHHHHHHHhc-CCCEEEECCccCCHHHHHHHHHcC
Confidence 377899999999999999999999876532 0001222222222 567899999999999999999999
Q ss_pred CeEEECccchhhc----cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHH
Q 011766 310 VKVSHCPASAMRM----LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETV 385 (478)
Q Consensus 310 ~~~~~~p~~~~~~----~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~a 385 (478)
+.+++||..+... ....+++.+++.|+++++|||+++.....+++..++.+..... .++|.+++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~ 264 (275)
T cd01292 197 VSLEVCPLSNYLLGRDGEGAEALRRLLELGIRVTLGTDGPPHPLGTDLLALLRLLLKVLR------------LGLSLEEA 264 (275)
T ss_pred CeEEECCcccccccCCcCCcccHHHHHHCCCcEEEecCCCCCCCCCCHHHHHHHHHHHHh------------cCCCHHHH
Confidence 9999999987653 5678999999999999999999765345678887776654321 13799999
Q ss_pred HHHHhHHHHHH
Q 011766 386 LRMATINGAKS 396 (478)
Q Consensus 386 l~~~T~~pA~~ 396 (478)
++++|.|||++
T Consensus 265 ~~~~t~n~a~~ 275 (275)
T cd01292 265 LRLATINPARA 275 (275)
T ss_pred HHHHhccccCC
Confidence 99999999973
No 111
>cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively. ADA plays an important role in the purine pathway. Low, as well as high levels of ADA activity have been linked to several diseases.
Probab=99.66 E-value=2e-14 Score=136.26 Aligned_cols=245 Identities=19% Similarity=0.185 Sum_probs=161.0
Q ss_pred cCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeec-CCc-------cCH--------HHHHHHHHHhC
Q 011766 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAE-AGG-------QHV--------SEMAKAVELLG 161 (478)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~-~~~-------~~~--------~~~~~~~~~~g 161 (478)
..+.++.+|+....+.....++.++.+...+..+.++++.|||++-- ... ... ..+.+..+..|
T Consensus 46 ~~~~~l~~~l~~~~~~~~~~~~~ed~~~~~~~~~~e~~~~Gvt~~E~~~~p~~~~~~~~~~~~~~~~~~~ai~~~~~~~g 125 (325)
T cd01320 46 YNFSDLQDFLAKYDFGLSVLQTEEDFERLAYEYLEDAAADGVVYAEIRFSPQLHTRRGLSFDEVVEAVLRGLDEAEAEFG 125 (325)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCEEEEEEeCchhhccCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 34556678887777777777788888888889999999999997521 111 111 12233334557
Q ss_pred CeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEecccc-ccCCHHHHHHH
Q 011766 162 LRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQI-MNATDRLLLET 240 (478)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~ 240 (478)
++..+....... .+ ..... +..+...++.. ...+. +++.+. ...+.+.+..+
T Consensus 126 i~~~l~~~~~~~---~~--------~~~~~------------~~~~~~~~~~~--~~vvg--~~l~~~~~~~~~~~~~~~ 178 (325)
T cd01320 126 IKARLILCGLRH---LS--------PESAQ------------ETLELALKYRD--KGVVG--FDLAGDEVGFPPEKFVRA 178 (325)
T ss_pred CeEEEEEEecCC---CC--------HHHHH------------HHHHHHHhccC--CCEEE--eecCCCCCCCCHHHHHHH
Confidence 777654332110 00 00011 22333333322 22233 333222 23477899999
Q ss_pred HHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccC--ChhHHHHHHhcCCeEEECccc
Q 011766 241 RDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV--NHTEIGLLSRAGVKVSHCPAS 318 (478)
Q Consensus 241 ~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~--~~~~~~~~~~~~~~~~~~p~~ 318 (478)
++.|++.|+++++|+.+....... ...+...+. ..+.|+.++ .+++++++++.|+.+++||.+
T Consensus 179 ~~~A~~~g~~v~~H~~E~~~~~~~-----------~~a~~~~g~----~~i~H~~~l~~~~~~~~~l~~~gi~v~~~P~s 243 (325)
T cd01320 179 FQRAREAGLRLTAHAGEAGGPESV-----------RDALDLLGA----ERIGHGIRAIEDPELVKRLAERNIPLEVCPTS 243 (325)
T ss_pred HHHHHHCCCceEEeCCCCCCHHHH-----------HHHHHHcCC----cccchhhccCccHHHHHHHHHcCCeEEECCCc
Confidence 999999999999999876432111 122222221 237899999 467899999999999999999
Q ss_pred hhhcc-----CCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHH
Q 011766 319 AMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATING 393 (478)
Q Consensus 319 ~~~~~-----~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~p 393 (478)
|+... ...|++.+++.|+++++|||.++. +..+++.+++.+.... +++++| +..+|.|+
T Consensus 244 n~~l~~~~~~~~~p~~~l~~~Gv~v~lgTD~~~~-~~~~~~~e~~~~~~~~--------------~l~~~e-l~~~~~na 307 (325)
T cd01320 244 NVQTGAVKSLAEHPLRELLDAGVKVTINTDDPTV-FGTYLTDEYELLAEAF--------------GLTEEE-LKKLARNA 307 (325)
T ss_pred cccccccCCcccChHHHHHHCCCEEEECCCCCcc-cCCCHHHHHHHHHHHc--------------CCCHHH-HHHHHHHH
Confidence 88663 258999999999999999998654 3457888887766432 589999 56688999
Q ss_pred HHHcCCC
Q 011766 394 AKSVLWD 400 (478)
Q Consensus 394 A~~lgl~ 400 (478)
++...+.
T Consensus 308 ~~~~f~~ 314 (325)
T cd01320 308 VEASFLS 314 (325)
T ss_pred HHHhCCC
Confidence 9998764
No 112
>PRK09358 adenosine deaminase; Provisional
Probab=99.66 E-value=3e-14 Score=135.68 Aligned_cols=248 Identities=18% Similarity=0.167 Sum_probs=164.2
Q ss_pred cccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCccee---ecCC-----ccCHH--------HHHHHHHH
Q 011766 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCF---AEAG-----GQHVS--------EMAKAVEL 159 (478)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv---~~~~-----~~~~~--------~~~~~~~~ 159 (478)
+.....++.+|+....++.....+.++.+...+..+.++++.|||++ .++. +.... ...+....
T Consensus 52 ~~~~~~~l~~~l~~~~~~~~~~~t~ed~~~~~~~~~~e~~~~Gvty~E~~~~p~~~~~~gl~~~~~~~a~~~~~~~a~~~ 131 (340)
T PRK09358 52 AAYDFRDLQSFLDKYDAGVAVLQTEEDLRRLAFEYLEDAAADGVVYAEIRFDPQLHTERGLPLEEVVEAVLDGLRAAEAE 131 (340)
T ss_pred ccccCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCEEEEEEeChhhhhhcCCCHHHHHHHHHHHHHHHHHh
Confidence 33345567788887777777778888989999999999999999975 2221 01111 22333445
Q ss_pred hCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEecccc-ccCCHHHHH
Q 011766 160 LGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQI-MNATDRLLL 238 (478)
Q Consensus 160 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~ 238 (478)
.|++..+....... .+ .+.... ...+.++.+. ....+. +++.+. ...+++.+.
T Consensus 132 ~gi~~~li~~~~r~---~~-------~~~~~~------------~~~~~~~~~~--~~~vvg--~~l~g~e~~~~~~~~~ 185 (340)
T PRK09358 132 FGISVRLILCFMRH---FG-------EEAAAR------------ELEALAARYR--DDGVVG--FDLAGDELGFPPSKFA 185 (340)
T ss_pred cCceEEEEEEecCC---CC-------HHHHHH------------HHHHHHHHhc--CCcEEE--EeCCCcCCCCCHHHHH
Confidence 58877665433211 00 000001 2223333322 222333 344322 345778899
Q ss_pred HHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCC--hhHHHHHHhcCCeEEECc
Q 011766 239 ETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKVSHCP 316 (478)
Q Consensus 239 ~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~--~~~~~~~~~~~~~~~~~p 316 (478)
.+++.|++.|+++++|+.+...... ....+...+ . ..+.||.++. ++.++++++.++.+++||
T Consensus 186 ~~~~~A~~~g~~~~~H~~E~~~~~~-----------~~~al~~lg---~-~ri~Hg~~l~~~~~~~~~l~~~gi~v~~cP 250 (340)
T PRK09358 186 RAFDRARDAGLRLTAHAGEAGGPES-----------IWEALDELG---A-ERIGHGVRAIEDPALMARLADRRIPLEVCP 250 (340)
T ss_pred HHHHHHHHCCCCeEEcCCCCCchhH-----------HHHHHHHcC---C-cccchhhhhccCHHHHHHHHHcCCeEEECC
Confidence 9999999999999999997543211 112222222 2 2379999995 668999999999999999
Q ss_pred cchhhcc-----CCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhH
Q 011766 317 ASAMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATI 391 (478)
Q Consensus 317 ~~~~~~~-----~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~ 391 (478)
.+|+... +..|+++++++|+++++|||.+... ..+++++++.+.... +++++++ ..++.
T Consensus 251 ~Sn~~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~-~~~l~~e~~~~~~~~--------------~l~~~el-~~l~~ 314 (340)
T PRK09358 251 TSNVQTGAVPSLAEHPLKTLLDAGVRVTINTDDPLVF-GTTLTEEYEALAEAF--------------GLSDEDL-AQLAR 314 (340)
T ss_pred CccccccccCCcccChHHHHHHCCCEEEECCCCCccc-CCCHHHHHHHHHHHh--------------CCCHHHH-HHHHH
Confidence 9998762 4689999999999999999986553 468999988776432 5999995 56678
Q ss_pred HHHHHcCCC
Q 011766 392 NGAKSVLWD 400 (478)
Q Consensus 392 ~pA~~lgl~ 400 (478)
|+.+...++
T Consensus 315 nai~~sf~~ 323 (340)
T PRK09358 315 NALEAAFLS 323 (340)
T ss_pred HHHHHHCCC
Confidence 988887664
No 113
>TIGR01430 aden_deam adenosine deaminase. This family includes the experimentally verified adenosine deaminases of mammals and E. coli. Other members of this family are predicted also to be adenosine deaminase, an enzyme of nucleotide degradation. This family is distantly related to AMP deaminase.
Probab=99.63 E-value=7e-14 Score=132.27 Aligned_cols=241 Identities=19% Similarity=0.221 Sum_probs=161.4
Q ss_pred CCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCC--cc-------CH--------HHHHHHHHHhCCe
Q 011766 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--GQ-------HV--------SEMAKAVELLGLR 163 (478)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~--~~-------~~--------~~~~~~~~~~g~~ 163 (478)
.++.+|+....++.....+.++.+...+....++++.||| ..+.- .. .. ..+.+..+..|++
T Consensus 48 ~~l~~~l~~~~~~~~~~~t~e~l~~~~~~~~~e~~~~Gv~-y~E~r~~p~~~~~~g~~~~~~~~~~~~~i~~a~~~~gi~ 126 (324)
T TIGR01430 48 RDLQDFLAKYDFGVEVLRTEDDFKRLAYEYVEKAAKDGVV-YAEVFFDPQLHTNRGISPDTVVEAVLDGLDEAERDFGIK 126 (324)
T ss_pred CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCE-EEEEEeCccccccCCCCHHHHHHHHHHHHHHHHHhcCCe
Confidence 4577888877777777778888888888899999999996 44421 10 11 1233344566777
Q ss_pred EEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEecccc-ccCCHHHHHHHHH
Q 011766 164 ACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQI-MNATDRLLLETRD 242 (478)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~ 242 (478)
..+..+..... . .+... ...+...++.. ...+. ++..+. ...+.+.+..+++
T Consensus 127 ~~li~~~~r~~---~--------~~~~~------------~~~~~~~~~~~--~~vvg--~~l~~~e~~~~~~~~~~~~~ 179 (324)
T TIGR01430 127 SRLILCGMRHK---Q--------PEAAE------------ETLELAKPYKE--QTIVG--FGLAGDERGGPPPDFVRAFA 179 (324)
T ss_pred EEEEEEEeCCC---C--------HHHHH------------HHHHHHHhhcc--CcEEE--ecCCCCCCCCCHHHHHHHHH
Confidence 65544333210 0 00011 22222222221 12222 334332 3456888999999
Q ss_pred HHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccC--ChhHHHHHHhcCCeEEECccchh
Q 011766 243 MAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV--NHTEIGLLSRAGVKVSHCPASAM 320 (478)
Q Consensus 243 ~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~--~~~~~~~~~~~~~~~~~~p~~~~ 320 (478)
.|++.|+++++|+.+...... ....+...+. ..+.|+.++ ++++++++++.|+.+++||.+|+
T Consensus 180 ~A~~~g~~i~~Ha~E~~~~~~-----------~~~~~~~~g~----~ri~Hg~~l~~~~~~i~~l~~~gi~v~~cP~Sn~ 244 (324)
T TIGR01430 180 IARELGLHLTVHAGELGGPES-----------VREALDDLGA----TRIGHGVRALEDPELLKRLAQENITLEVCPTSNV 244 (324)
T ss_pred HHHHCCCCeEEecCCCCChHH-----------HHHHHHHcCc----hhcchhhhhccCHHHHHHHHHcCceEEECCcccc
Confidence 999999999999997632111 1112222222 247999999 67799999999999999999998
Q ss_pred hcc-----CCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHH
Q 011766 321 RML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAK 395 (478)
Q Consensus 321 ~~~-----~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~ 395 (478)
... ...|+++|+++|++|++|||.+...+ .++..++..+... .+++++| ++++|.|+++
T Consensus 245 ~l~~~~~~~~~pi~~l~~~Gv~v~igTD~~~~~~-~~l~~e~~~a~~~--------------~~l~~~e-l~~~~~na~~ 308 (324)
T TIGR01430 245 ALGVVKSLAEHPLRRFLEAGVKVTLNSDDPAYFG-SYLTEEYEIAAKH--------------AGLTEEE-LKQLARNALE 308 (324)
T ss_pred cccccCCcccChHHHHHHCCCEEEECCCCCcccC-CCHHHHHHHHHHH--------------cCCCHHH-HHHHHHHHHH
Confidence 663 37899999999999999999876543 3888888877643 2599999 8899999999
Q ss_pred HcCCC
Q 011766 396 SVLWD 400 (478)
Q Consensus 396 ~lgl~ 400 (478)
.+.++
T Consensus 309 ~~f~~ 313 (324)
T TIGR01430 309 GSFLS 313 (324)
T ss_pred HhCCC
Confidence 98774
No 114
>cd01316 CAD_DHOase The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis. Dihydroorotase (DHOase) catalyzes the third step, the reversible interconversion of carbamoyl aspartate to dihydroorotate.
Probab=99.63 E-value=5.3e-14 Score=132.64 Aligned_cols=73 Identities=15% Similarity=0.094 Sum_probs=53.2
Q ss_pred CCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCC--------hhhhhhhccCCCCeeEEEEc
Q 011766 378 AALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHD--------RITSLVYCMRTENVVSVMCN 449 (478)
Q Consensus 378 ~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d--------~~~~~~~~~~~~~v~~v~v~ 449 (478)
+++++.++++++|.|||+++|+.+. .+||+|+|++..+..+.++ |+... .-..+|.+||++
T Consensus 259 ~~i~l~~l~~~~s~nPAk~~gl~~~--------~~~lvi~d~~~~~~v~~~~~~s~~~~sp~~G~---~l~G~v~~ti~r 327 (344)
T cd01316 259 GRLTIEDIVDRLHTNPKRIFNLPPQ--------SDTYVEVDLDEEWTIPKNPLQSKKGWTPFEGK---KVKGKVQRVVLR 327 (344)
T ss_pred CCCCHHHHHHHHHHhHHHHhCCCCC--------CCCEEEEeCCCcEEEChhhccccCCCCCCCCC---EEeeEEEEEEEC
Confidence 3599999999999999999999542 3479999987433222222 33221 123589999999
Q ss_pred cEEEEECCeeec
Q 011766 450 GQWVMKNKKILL 461 (478)
Q Consensus 450 G~~v~~~g~~~~ 461 (478)
|++||++|+++.
T Consensus 328 G~~v~~~g~~~~ 339 (344)
T cd01316 328 GETAFIDGEIVA 339 (344)
T ss_pred CEEEEECCEEcc
Confidence 999999998753
No 115
>PF13594 Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1NFG_C 2FVM_A 2FVK_A 2FTY_D 1YBQ_B 1POJ_B 1ONW_A 2AQO_B ....
Probab=99.53 E-value=1.5e-14 Score=102.19 Aligned_cols=44 Identities=27% Similarity=0.663 Sum_probs=34.2
Q ss_pred EEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccc
Q 011766 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (478)
Q Consensus 43 v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~ 90 (478)
|+|+||||++|++.... +..+.++||++|++|+|||||+|+|+.
T Consensus 1 V~I~~g~I~~v~~~~~~----~~~~~~viD~~g~~v~PG~ID~H~H~~ 44 (68)
T PF13594_consen 1 VLIEDGKIVAVGPDSEL----PADAAEVIDAKGKYVMPGFIDMHTHLG 44 (68)
T ss_dssp EEEETTEEEEEESSCCT----TSTCCEEEEETTCEEEE-EEEEEE-TT
T ss_pred CEEECCEEEEeCCCCCC----CCCCCEEEECCCCEEeCCeEeeeeccc
Confidence 78999999999654432 224567999999999999999999973
No 116
>cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis. In contrast to the large polyfunctional CAD proteins of higher organisms, this group of DHOases is monofunctional and mainly dimeric.
Probab=99.37 E-value=1.1e-10 Score=111.12 Aligned_cols=161 Identities=11% Similarity=0.037 Sum_probs=94.5
Q ss_pred CHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCch-HHHHhhhC-CCCCCeeeeeeccCChhHHHHHHhc--
Q 011766 233 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGT-VTFLDKIE-FLQNNLLSAHTVWVNHTEIGLLSRA-- 308 (478)
Q Consensus 233 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~-~~~~~~~i~h~~~~~~~~~~~~~~~-- 308 (478)
+.+.+.++++.+.+.|+++.+|+............. ... ........ ..+.+.++.|.. +.+.++.+++.
T Consensus 111 d~~~l~~~~e~~~~~g~~V~vHaE~~~l~~~~~~~e----~~~~~~~~~lA~~~p~~~v~i~Hvs--t~~~~~~i~~ak~ 184 (335)
T cd01294 111 DLEKIYPVLEAMQKLGMPLLVHGEVPDFKIDVLDRE----AKFIPVLEPLAQRFPKLKIVLEHIT--TADAVEYVKSCNE 184 (335)
T ss_pred CHHHHHHHHHHHHHcCCeEEEecCCCcccccchhhH----HHHHHHHHHHHHHcCCCeEEEeccc--HHHHHHHHHhCCC
Confidence 356788899999999999999997643210000000 001 11112222 234567777776 45666666544
Q ss_pred CCeEEECccchhhc-------------cCCCcHH---------HHHHCCCcE-EEcCCCCCCCCCc----------CHHH
Q 011766 309 GVKVSHCPASAMRM-------------LGFAPIK---------EMLHADICV-SLGTDGAPSNNRM----------SIVD 355 (478)
Q Consensus 309 ~~~~~~~p~~~~~~-------------~~~~~~~---------~~~~~gv~v-~~gsD~~~~~~~~----------~~~~ 355 (478)
++.+.+||.+.... .-.+|+| +.+..|... +++|||.|+.... ..++
T Consensus 185 ~vt~Et~ph~L~l~~~~~~~~~~g~~~k~~PPlR~~~d~~~L~~~l~~G~id~~i~SDHaP~~~~~K~~~~g~~Gi~~~~ 264 (335)
T cd01294 185 NVAATITPHHLLLTRDDLLGGGLNPHLYCKPVAKRPEDREALRKAATSGHPKFFLGSDSAPHPKSNKESSCGCAGIFSAP 264 (335)
T ss_pred CcEEEEchhHheeeHHHhcCCCCCCCeEEcCCCCCHHHHHHHHHHHHcCCCCeEEECCCCCCCCccccCCCCCccccCHH
Confidence 58888998753211 1123333 566789888 5999998763211 1111
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCc
Q 011766 356 EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGK 410 (478)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~ 410 (478)
.+-. .+... . .+++|++++++.++.|||+++|+.+++|+|.+|.
T Consensus 265 ~~l~-~~~~~---------~-~~~l~l~~~v~~~s~nPA~i~gl~~~kg~i~~~~ 308 (335)
T cd01294 265 IALP-YLAEV---------F-EEHNALDKLEAFASDNGPNFYGLPPNKKTITLVK 308 (335)
T ss_pred HHHH-HHHHH---------H-hccCCHHHHHHHHHhHHHHHhCCCCCCCeEEEEe
Confidence 1111 11110 0 1259999999999999999999977666666664
No 117
>cd00530 PTE Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon. PTE exists as a homodimer with one active site per monomer. The active site is located next to a binuclear metal center, at the C-terminal end of a TIM alpha- beta barrel motif. The native enzyme contains two zinc ions at the active site however these can be replaced with other metals such as cobalt, cadmium, nickel or manganese and the enzyme remains active.
Probab=98.96 E-value=1.1e-07 Score=88.88 Aligned_cols=237 Identities=10% Similarity=0.027 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHHHhcCcceeecCCcc----CHHHHHHHHHHhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccc
Q 011766 123 SYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISF 198 (478)
Q Consensus 123 ~~~~~~~~~~~~l~~GvTtv~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (478)
.+......+.+++++|+|++++.+.. ......+..+..|++.+......... ..+.+. ......
T Consensus 30 ~~~~~~~~~~~~~~~Gvttiv~~~~~~~~~~~~~~~~~~~~~g~~v~~~~G~hp~~--~~~~~~---~~~~~~------- 97 (293)
T cd00530 30 DVEAAKEELKRFRAHGGRTIVDATPPGIGRDVEKLAEVARATGVNIVAATGFYKDA--FYPEWV---RLRSVE------- 97 (293)
T ss_pred hHHHHHHHHHHHHHcCCCeEEEcCCcccCcCHHHHHHHHHHhCCcEEEecccCCCc--cChHHH---hhCCHH-------
Confidence 34556667788999999999998743 34455556666777765443322110 000000 000001
Q ss_pred cccchhHHHHHH-Hhc---CCCC---CCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCC
Q 011766 199 NFVSSSQKELYA-KHH---HAAD---GRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV 271 (478)
Q Consensus 199 ~~~~~~~~~~~~-~~~---~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~ 271 (478)
...+.+. ... .... +.+.-+...........+.+++.+++|++.|++|++|+.+......
T Consensus 98 -----~l~~~~~~~l~~~~~~~~i~~~~IGEigld~~~~~~q~~~f~~~~~lA~~~~~Pv~iH~~~~~~~~~-------- 164 (293)
T cd00530 98 -----ELTDMLIREIEEGIEGTGIKAGIIKEAGGSPAITPLEEKVLRAAARAQKETGVPISTHTQAGLTMGL-------- 164 (293)
T ss_pred -----HHHHHHHHHHHhccccCCcCceEEEEeecCCCCCHHHHHHHHHHHHHHHHHCCeEEEcCCCCccccH--------
Confidence 2222111 111 1100 1121111111122233456788899999999999999875311110
Q ss_pred CCchHHHHhhhCCCCCCeeeeeec-cCChhHHHHHHhcCCeEEECccchhh---c----cCCCcHHHHHHCCC--cEEEc
Q 011766 272 DHGTVTFLDKIEFLQNNLLSAHTV-WVNHTEIGLLSRAGVKVSHCPASAMR---M----LGFAPIKEMLHADI--CVSLG 341 (478)
Q Consensus 272 ~~~~~~~l~~~~~~~~~~~i~h~~-~~~~~~~~~~~~~~~~~~~~p~~~~~---~----~~~~~~~~~~~~gv--~v~~g 341 (478)
.....+...+....+.++.|+. .-+.+.+..+.+.|..+.++...... . .....++++++.+. .+.++
T Consensus 165 --~~l~~l~~~g~~~~~~vi~H~~~~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ill~ 242 (293)
T cd00530 165 --EQLRILEEEGVDPSKVVIGHLDRNDDPDYLLKIAALGAYLEFDGIGKDKIFGYPSDETRADAVKALIDEGYGDRLLLS 242 (293)
T ss_pred --HHHHHHHHcCCChhheEEeCCCCCCCHHHHHHHHhCCCEEEeCCCCcccccCCCCHHHHHHHHHHHHHCCCcCCEEEe
Confidence 1334555555555567899998 45678899999999988877533211 0 12334677888886 77999
Q ss_pred CCCCCCCCC------cCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 011766 342 TDGAPSNNR------MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 397 (478)
Q Consensus 342 sD~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~l 397 (478)
||.+..... ..+..-+....... ...+++.+++.+..+.||+++|
T Consensus 243 TD~p~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~g~~~e~i~~~~~~N~~~lf 293 (293)
T cd00530 243 HDVFRKSYLEKRYGGHGYDYILTRFIPRL-----------RERGVTEEQLDTILVENPARFL 293 (293)
T ss_pred CCcCchhhhhhccCCCChHHHHHHHHHHH-----------HHcCCCHHHHHHHHHHCHHHhC
Confidence 998542110 00110011111110 1236999999999999999875
No 118
>cd00443 ADA_AMPD Adenosine/AMP deaminase. Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase catalyzes a similar reaction leading to the hydrolytic removal of an amino group at the 6 position of the adenine nucleotide ring, a branch point in the adenylate catabolic pathway.
Probab=98.83 E-value=1.1e-07 Score=88.79 Aligned_cols=144 Identities=20% Similarity=0.228 Sum_probs=105.4
Q ss_pred EeccccccC---CHHHHHHHHHHHHHcC-CceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCCh
Q 011766 224 FGIRQIMNA---TDRLLLETRDMAREFK-TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH 299 (478)
Q Consensus 224 ~~~~~~~~~---~~~~l~~~~~~a~~~~-~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~ 299 (478)
++..+.+.. +.......++.+++.| +++.+|+.+..... ...+....+ ...|+|+..+.+
T Consensus 139 ~Dl~g~E~~~~~~~~~f~~~~~~ar~~g~l~~t~HaGE~~~~~--------------~v~~~~~~~--~~RIgHg~~~~~ 202 (305)
T cd00443 139 IDLVGDESKGENPLRDFYSYYEYARRLGLLGLTLHCGETGNRE--------------ELLQALLLL--PDRIGHGIFLLK 202 (305)
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHcCCcceEEeecCCCChH--------------HHHHHHHhc--cceeeceEecCC
Confidence 444444433 4677888899999999 99999999863321 111222222 346899999977
Q ss_pred --hHHHHHHhcCCeEEECccchhhccC-----CCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccC
Q 011766 300 --TEIGLLSRAGVKVSHCPASAMRMLG-----FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFAN 372 (478)
Q Consensus 300 --~~~~~~~~~~~~~~~~p~~~~~~~~-----~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (478)
+.++++++.++.+.+||.+|..... ..|++.+++.|++++++||.+...++ ++..+++.+....
T Consensus 203 ~p~~~~~l~~~~i~ie~CP~SN~~~~~~~~~~~hP~~~~~~~G~~v~i~TDd~~~~~~-~l~~E~~~~~~~~-------- 273 (305)
T cd00443 203 HPELIYLVKLRNIPIEVCPTSNVVLGTVQSYEKHPFMRFFKAGLPVSLSTDDPGIFGT-SLSEEYSLAAKTF-------- 273 (305)
T ss_pred CHHHHHHHHHcCCEEEECcchhhhhcCCCChhhChHHHHHHCCCeEEEeCCCCcccCC-ChHHHHHHHHHHc--------
Confidence 9999999999999999999987733 37899999999999999999765443 7888887766432
Q ss_pred CCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 011766 373 GTTDPAALPAETVLRMATINGAKSVLW 399 (478)
Q Consensus 373 ~~~~~~~ls~~~al~~~T~~pA~~lgl 399 (478)
+++.++..+++ .|+-+...+
T Consensus 274 ------~l~~~~l~~l~-~nsi~~sf~ 293 (305)
T cd00443 274 ------GLTFEDLCELN-RNSVLSSFA 293 (305)
T ss_pred ------CcCHHHHHHHH-HHHHHHhcC
Confidence 48888876654 566555544
No 119
>PRK05451 dihydroorotase; Provisional
Probab=98.76 E-value=6.8e-07 Score=85.07 Aligned_cols=161 Identities=12% Similarity=0.110 Sum_probs=95.7
Q ss_pred CHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchH-HHHh-hh-CCCCCCeeeeeeccCChhHHHHHHh--
Q 011766 233 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV-TFLD-KI-EFLQNNLLSAHTVWVNHTEIGLLSR-- 307 (478)
Q Consensus 233 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~-~~l~-~~-~~~~~~~~i~h~~~~~~~~~~~~~~-- 307 (478)
+.+.+.++++.+.+.|+++.+|+............ ..... ..+. .. ...+.+..+.|.. +.+.++.+++
T Consensus 116 dd~~l~~~~e~~~~~g~~V~vHaE~~~~~~~~~~~----e~~~~~~~l~~lA~~~pg~~lhI~Hls--t~~~~e~i~~a~ 189 (345)
T PRK05451 116 DIEKIYPVLEAMQKLGMPLLVHGEVTDPDIDIFDR----EAVFIDRVLEPLRRRFPKLKIVFEHIT--TKDAVDYVREAN 189 (345)
T ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCcccccccc----hHHHHHHHHHHHHHhcCCCcEEEEecC--cHHHHHHHHhcC
Confidence 56788889999999999999998753221000000 00001 1111 11 2225567777876 4566666554
Q ss_pred cCCeEEECccchhhc-------------cCCCcHH---------HHHHCCCcE-EEcCCCCCCCC--------CcCHHHH
Q 011766 308 AGVKVSHCPASAMRM-------------LGFAPIK---------EMLHADICV-SLGTDGAPSNN--------RMSIVDE 356 (478)
Q Consensus 308 ~~~~~~~~p~~~~~~-------------~~~~~~~---------~~~~~gv~v-~~gsD~~~~~~--------~~~~~~~ 356 (478)
.++.+.+||...... .-.+|+| +.+..|... +++|||.|+.. ...++..
T Consensus 190 ~~it~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aLw~~l~~G~Id~~i~SDHaP~~~~~K~~~~G~~gi~~~ 269 (345)
T PRK05451 190 DNLAATITPHHLLINRNDMLVGGIRPHLYCLPILKRETHRQALREAATSGNPKFFLGTDSAPHARHAKESACGCAGIFSA 269 (345)
T ss_pred CCEEEEecHHHHhcCHHHHhCCCcCCCeEEeCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCChHHhCCCCCCCchhhH
Confidence 356678898753211 0123333 667889888 89999988631 0122221
Q ss_pred H-HHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccC
Q 011766 357 M-YLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAG 409 (478)
Q Consensus 357 ~-~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G 409 (478)
. ....+... ... +.++++++++++.|||+++|+.+++|+|.+|
T Consensus 270 ~~g~~~~~~~---------~~~-~~~l~~~v~~~s~nPAkifGl~~~KG~i~~~ 313 (345)
T PRK05451 270 PAALELYAEV---------FEE-AGALDKLEAFASLNGPDFYGLPRNTDTITLV 313 (345)
T ss_pred HHHHHHHHHH---------HHc-CCCHHHHHHHHhHHHHHHhCCCCCCCeEEEE
Confidence 1 00111100 011 2389999999999999999999899999888
No 120
>TIGR00010 hydrolase, TatD family. Several genomes have multiple paralogs related to this family. However, a set of 17 proteins can be found, one each from 17 of the first 20 genomes, such that each member forms a bidirectional best hit across genomes with all other members of the set. This core set (and one other near-perfect member), but not the other paralogs, form the seed for this model. Additionally, members of the seed alignment and all trusted hits, but not all paralogs, have a conserved motif DxHxH near the amino end. The member from E. coli was recently shown to have DNase activity.
Probab=98.73 E-value=4e-06 Score=76.60 Aligned_cols=137 Identities=11% Similarity=0.058 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEE
Q 011766 235 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 314 (478)
Q Consensus 235 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~ 314 (478)
+.+...+++|.+.|++|.+|+...... ..+.+...+ .....+.|+..-+.+.+..+.+.|+.+.+
T Consensus 108 ~~~~~~~~~a~~~~~pv~iH~~~~~~~-------------~~~~l~~~~--~~~~~i~H~~~~~~~~~~~~~~~g~~~~~ 172 (252)
T TIGR00010 108 EVFRAQLQLAEELNLPVIIHARDAEED-------------VLDILREEK--PKVGGVLHCFTGDAELAKKLLDLGFYISI 172 (252)
T ss_pred HHHHHHHHHHHHhCCCeEEEecCccHH-------------HHHHHHhcC--CCCCEEEEccCCCHHHHHHHHHCCCeEee
Confidence 678888899999999999999753321 223333333 23356779876667888888888999888
Q ss_pred CccchhhccCCCcHHHHHHCC--CcEEEcCCCCCCC-----CCcCHHHHHHH-HHHHhcccccccCCCCCCCCCCHHHHH
Q 011766 315 CPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSN-----NRMSIVDEMYL-ASLINKGREVFANGTTDPAALPAETVL 386 (478)
Q Consensus 315 ~p~~~~~~~~~~~~~~~~~~g--v~v~~gsD~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ls~~~al 386 (478)
...... .....++++++.. -++.++||.+... ...+....+.. ...... ..|+|.+++.
T Consensus 173 ~~~~~~--~~~~~~~~~i~~~~~dril~~TD~p~~~~~~~~~~~~~p~~i~~~~~~~a~-----------~~g~~~~~~~ 239 (252)
T TIGR00010 173 SGIVTF--KNAKSLREVVRKIPLERLLVETDSPYLAPVPYRGKRNEPAFVRYTVEAIAE-----------IKGMDVEELA 239 (252)
T ss_pred ceeEec--CCcHHHHHHHHhCCHHHeEecccCCCCCCCCCCCCCCCChhHHHHHHHHHH-----------HhCcCHHHHH
Confidence 764321 1123355666554 4799999985321 00011011111 111110 1269999999
Q ss_pred HHHhHHHHHHcCC
Q 011766 387 RMATINGAKSVLW 399 (478)
Q Consensus 387 ~~~T~~pA~~lgl 399 (478)
++++.||++++++
T Consensus 240 ~~~~~N~~~~~~~ 252 (252)
T TIGR00010 240 QITTKNAKRLFGL 252 (252)
T ss_pred HHHHHHHHHHhCc
Confidence 9999999999975
No 121
>TIGR00856 pyrC_dimer dihydroorotase, homodimeric type. This homodimeric form of dihydroorotase is less common in microbial genomes than a related dihydroorotase that appears in a complex with aspartyltranscarbamoylase or as a homologous domain in multifunctional proteins of pyrimidine biosynthesis in higher eukaryotes.
Probab=98.68 E-value=2.9e-06 Score=80.41 Aligned_cols=162 Identities=13% Similarity=0.113 Sum_probs=93.3
Q ss_pred CHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchH-HHHhh--hCCCCCCeeeeeeccCChhHHHHHHhc-
Q 011766 233 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV-TFLDK--IEFLQNNLLSAHTVWVNHTEIGLLSRA- 308 (478)
Q Consensus 233 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~-~~l~~--~~~~~~~~~i~h~~~~~~~~~~~~~~~- 308 (478)
+...+.++++.+++.|+++.+|+............ ..... ..+.. ....+.+..+.|... .+.++.+++.
T Consensus 113 dd~~l~~~~e~~~e~g~~v~vHaEd~~~~i~~~~~----e~~a~~~~i~~lA~~~~~~~~~i~H~st--~~~~~~i~~a~ 186 (341)
T TIGR00856 113 DIDAIMPVLEAMEKIGLPLLLHGEVTHGDIDIFDR----EARFIESVLEPLRQRFPALKVVLEHITT--KDAIDYVEDGN 186 (341)
T ss_pred CHHHHHHHHHHHHHcCCeEEEeecCCCCCcccccc----hhhhhHHHHHHHHHHccCCeEEEEecCc--HHHHHHHHHcC
Confidence 34678889999999999999999764211100000 00001 11111 122345566667653 4445444432
Q ss_pred -CCeEEECccchhhc-----c--------CCCcHH---------HHHHCCCcE-EEcCCCCCCCCCc---------CHHH
Q 011766 309 -GVKVSHCPASAMRM-----L--------GFAPIK---------EMLHADICV-SLGTDGAPSNNRM---------SIVD 355 (478)
Q Consensus 309 -~~~~~~~p~~~~~~-----~--------~~~~~~---------~~~~~gv~v-~~gsD~~~~~~~~---------~~~~ 355 (478)
.+...+||.+.... . -.+|+| +.+..|... +++|||.|+.... -+.-
T Consensus 187 ~~vt~E~~ph~L~l~~~~~~~~~~~~~~k~~PPlR~~~d~~aL~~~l~~G~id~~i~SDHaP~~~~~K~~~~~~~G~~g~ 266 (341)
T TIGR00856 187 NRLAATITPQHLMFTRNDLLGGGVNPHLYCLPILKRNIHQQALLELAASGFPKFFLGTDSAPHARHRKESSCGCAGCFSA 266 (341)
T ss_pred CCEEEEEcHHHHhccHHHHhccCCCCceEEeCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCChhHcCCCCCCCCcccH
Confidence 36778888753211 1 123333 667789888 6999998773110 0001
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEc
Q 011766 356 EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVD 418 (478)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d 418 (478)
+.....+.. .. ..++|+++++++.|.|||+++|+ ++ | +|||+|++
T Consensus 267 e~~l~~~~~---------~~-~~~~~l~~~v~~~s~nPAk~~gl-~~-~------dAdi~~~~ 311 (341)
T TIGR00856 267 PTALPSYAE---------VF-EEMNALENLEAFCSDNGPQFYGL-PV-N------STKIELVK 311 (341)
T ss_pred HHHHHHHHH---------HH-hcCCCHHHHHHHHhHhHHHHhCC-CC-C------CceEEEEe
Confidence 111111110 01 12589999999999999999999 43 4 89999995
No 122
>PRK09875 putative hydrolase; Provisional
Probab=98.67 E-value=6.8e-06 Score=75.37 Aligned_cols=239 Identities=12% Similarity=0.015 Sum_probs=137.2
Q ss_pred HHHHHHHHHHHhcCcceeecCC----ccCHHHHHHHHHHhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccc
Q 011766 125 ISTLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNF 200 (478)
Q Consensus 125 ~~~~~~~~~~l~~GvTtv~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (478)
.....-..++.+.|..|++|.. +..+..+.+..+..|++...+..++.... .|..... .+.+ .
T Consensus 34 ~~~~~el~~~~~~Gg~tiVd~T~~g~GRd~~~l~~is~~tgv~Iv~~TG~y~~~~-~p~~~~~-~~~e-----------~ 100 (292)
T PRK09875 34 AFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQDAF-FPEHVAT-RSVQ-----------E 100 (292)
T ss_pred HHHHHHHHHHHHhCCCeEEecCCCccCcCHHHHHHHHHHhCCcEEEcCcCCCCcc-CCHHHhc-CCHH-----------H
Confidence 3444455667888999999853 34567778888899999977655553321 2222111 1111 1
Q ss_pred cchhHHHHHHHhcCC---CCCCe-EEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchH
Q 011766 201 VSSSQKELYAKHHHA---ADGRI-RIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV 276 (478)
Q Consensus 201 ~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~ 276 (478)
+.....+.+...... ..+.+ ++............+.+++..+.+++.|+++++|........+ .+
T Consensus 101 la~~~i~ei~~Gi~gt~ikaGvIGeiG~~~~~it~~E~kvl~Aaa~a~~~TG~pi~~Ht~~~~~g~e-----------~l 169 (292)
T PRK09875 101 LAQEMVDEIEQGIDGTELKAGIIAEIGSSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMGLE-----------QL 169 (292)
T ss_pred HHHHHHHHHHHhhccCCCcccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHCCcEEEcCCCccchHH-----------HH
Confidence 111233333333221 11223 2111111122223345777778888999999999755322111 34
Q ss_pred HHHhhhCCCCCCeeeeeeccC-ChhHHHHHHhcCCeEEECccc-hh-hc--cCCCcHHHHHHCC--CcEEEcCCCCCCCC
Q 011766 277 TFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVKVSHCPAS-AM-RM--LGFAPIKEMLHAD--ICVSLGTDGAPSNN 349 (478)
Q Consensus 277 ~~l~~~~~~~~~~~i~h~~~~-~~~~~~~~~~~~~~~~~~p~~-~~-~~--~~~~~~~~~~~~g--v~v~~gsD~~~~~~ 349 (478)
+.+.+.+.-..++++.|.... +.+.+..+++.|+.+.+.... .. .. .....++.+.++| -++.+++|......
T Consensus 170 ~il~e~Gvd~~rvvi~H~d~~~d~~~~~~l~~~G~~l~fD~~g~~~~~pd~~r~~~i~~L~~~Gy~drilLS~D~~~~~~ 249 (292)
T PRK09875 170 ALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSH 249 (292)
T ss_pred HHHHHcCcCcceEEEeCCCCCCCHHHHHHHHHcCCEEEeccCCCcccCCHHHHHHHHHHHHhcCCCCeEEEeCCCCCccc
Confidence 567777777788999998754 567888999999998874211 10 00 1245567788887 57889999743311
Q ss_pred -----CcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 011766 350 -----RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 398 (478)
Q Consensus 350 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lg 398 (478)
...+..-+...... +.+.|+|.+++=++...||+++|+
T Consensus 250 ~~~~gg~G~~~i~~~~ip~-----------L~~~Gvse~~I~~m~~~NP~r~~~ 292 (292)
T PRK09875 250 LKANGGYGYDYLLTTFIPQ-----------LRQSGFSQADVDVMLRENPSQFFQ 292 (292)
T ss_pred ccccCCCChhHHHHHHHHH-----------HHHcCCCHHHHHHHHHHCHHHHhC
Confidence 00011111111110 112379999999999999999874
No 123
>cd01310 TatD_DNAse TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.
Probab=98.63 E-value=1.1e-05 Score=73.52 Aligned_cols=135 Identities=13% Similarity=0.079 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEE
Q 011766 234 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS 313 (478)
Q Consensus 234 ~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~ 313 (478)
.+.+...+++|.+.++++.+|+...... ..+.+...+ ....++.|+..-+.+.+..+.+.|+.+.
T Consensus 107 ~~~~~~~~~~a~e~~~pv~iH~~~~~~~-------------~~~l~~~~~--~~~~~i~H~~~~~~~~~~~~~~~g~~~~ 171 (251)
T cd01310 107 KEVFRAQLELAKELNLPVVIHSRDAHED-------------VLEILKEYG--PPKRGVFHCFSGSAEEAKELLDLGFYIS 171 (251)
T ss_pred HHHHHHHHHHHHHhCCCeEEEeeCchHH-------------HHHHHHhcC--CCCCEEEEccCCCHHHHHHHHHcCCEEE
Confidence 4568888999999999999998754221 223344433 2345667877656678888888999988
Q ss_pred ECccchhhccCCCcHHHHHHCC--CcEEEcCCCCCCCCC------cCH--HHHHHHHHHHhcccccccCCCCCCCCCCHH
Q 011766 314 HCPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNNR------MSI--VDEMYLASLINKGREVFANGTTDPAALPAE 383 (478)
Q Consensus 314 ~~p~~~~~~~~~~~~~~~~~~g--v~v~~gsD~~~~~~~------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~ 383 (478)
+.+..... ...-++.+++.+ -++.++||++..... ..+ ...+...... ..+++.+
T Consensus 172 ~~~~~~~~--~~~~~~~~~~~~~~dril~~TD~p~~~~~~~~~~~~~~~~~~~~~~~la~-------------~~gl~~e 236 (251)
T cd01310 172 ISGIVTFK--NANELREVVKEIPLERLLLETDSPYLAPVPFRGKRNEPAYVKHVAEKIAE-------------LKGISVE 236 (251)
T ss_pred eeeeeccC--CCHHHHHHHHhCChHHEEEcccCCCCCCCCCCCCCCCChhHHHHHHHHHH-------------HHCcCHH
Confidence 88754211 111255666554 478999998543110 011 1111111100 1269999
Q ss_pred HHHHHHhHHHHHHcC
Q 011766 384 TVLRMATINGAKSVL 398 (478)
Q Consensus 384 ~al~~~T~~pA~~lg 398 (478)
++.+..+.||+++||
T Consensus 237 ~~~~~~~~N~~~ll~ 251 (251)
T cd01310 237 EVAEVTTENAKRLFG 251 (251)
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999999999985
No 124
>PTZ00124 adenosine deaminase; Provisional
Probab=98.56 E-value=3.5e-06 Score=79.84 Aligned_cols=147 Identities=14% Similarity=0.159 Sum_probs=100.6
Q ss_pred EeccccccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccC--ChhH
Q 011766 224 FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV--NHTE 301 (478)
Q Consensus 224 ~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~--~~~~ 301 (478)
++..+.+.. ......+++.|++.|+++.+|+.+....... ......+...+. ..|+||..+ +++.
T Consensus 196 iDLaG~E~~-~~~f~~~f~~Ar~~Gl~~t~HaGE~~~~~~~--------~~v~~ai~~l~~----~RIGHG~~~~~d~~l 262 (362)
T PTZ00124 196 FDHAGHEVD-LKPFKDIFDYVREAGVNLTVHAGEDVTLPNL--------NTLYSAIQVLKV----KRIGHGIRVAESQEL 262 (362)
T ss_pred EeccCCCCC-cHHHHHHHHHHHHCCCCEEEEeCCCCCCCcc--------hhHHHHHHHhCC----CccccccccCCCHHH
Confidence 444444432 2446778899999999999999974210000 001122222222 348999998 5889
Q ss_pred HHHHHhcCCeEEECccchhhcc-----CCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCC
Q 011766 302 IGLLSRAGVKVSHCPASAMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTD 376 (478)
Q Consensus 302 ~~~~~~~~~~~~~~p~~~~~~~-----~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (478)
++++++.++.+.+||.+|.... ...|++.++++|++++++||.+... ..++..++..+...
T Consensus 263 ~~~l~~~~I~lEvCPtSN~~~~~v~~~~~HPi~~l~~~Gv~v~InTDDp~~~-~t~l~~Ey~~~~~~------------- 328 (362)
T PTZ00124 263 IDMVKEKDILLEVCPISNVLLNNAKSMDTHPIRKLYDAGVKVSVNSDDPGMF-LTNINDDYEELYTH------------- 328 (362)
T ss_pred HHHHHHcCCeEEECCcchhhhhcCCchhhHHHHHHHHCCCcEEEeCCCcccc-CCChhHHHHHHHHH-------------
Confidence 9999999999999999998663 3468999999999999999987553 34566666554432
Q ss_pred CCCCCHHHHHHHHhHHHHHHcCC
Q 011766 377 PAALPAETVLRMATINGAKSVLW 399 (478)
Q Consensus 377 ~~~ls~~~al~~~T~~pA~~lgl 399 (478)
.+++.++..++ +.|+.+...+
T Consensus 329 -~gls~~~l~~l-~~nai~asF~ 349 (362)
T PTZ00124 329 -LNFTLADFMKM-NEWALEKSFL 349 (362)
T ss_pred -cCCCHHHHHHH-HHHHHHHhcC
Confidence 26899888876 5566655544
No 125
>PLN02599 dihydroorotase
Probab=98.48 E-value=6e-06 Score=78.44 Aligned_cols=156 Identities=14% Similarity=0.119 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchH-HHH--hhhCCCCCCeeeeeeccCChhHHHHHHh--c
Q 011766 234 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV-TFL--DKIEFLQNNLLSAHTVWVNHTEIGLLSR--A 308 (478)
Q Consensus 234 ~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~-~~l--~~~~~~~~~~~i~h~~~~~~~~~~~~~~--~ 308 (478)
.+.+.++++.+.+.|+++.+|+............ ....+ ..+ ......+.+..+.|.+. .+.++.+++ .
T Consensus 135 ~~~l~~~le~~~e~G~~L~vH~E~~~~~~~~~~~----E~~~i~r~l~~~la~~~g~kI~i~HiSt--~~~ve~v~~ak~ 208 (364)
T PLN02599 135 LGKCLPVLEEMAEQGMPLLVHGEVTDPSVDIFDR----EKVFIDTILAPLVQKLPQLKIVMEHITT--MDAVEFVESCGD 208 (364)
T ss_pred HHHHHHHHHHHHhcCCEEEEecCCCccccccccc----HHHHHHHHHHHHHHhccCCeEEEEecCh--HHHHHHHHhccC
Confidence 4788888999999999999999763321100000 00011 122 12233455666777653 444444433 2
Q ss_pred -CCeEEECccchhhc------cC-------CCc---------HHHHHHCCCc-EEEcCCCCCCCCCc--------CHHHH
Q 011766 309 -GVKVSHCPASAMRM------LG-------FAP---------IKEMLHADIC-VSLGTDGAPSNNRM--------SIVDE 356 (478)
Q Consensus 309 -~~~~~~~p~~~~~~------~~-------~~~---------~~~~~~~gv~-v~~gsD~~~~~~~~--------~~~~~ 356 (478)
++...+||.+.... .+ .+| +.+.+..|.. .+++|||.|+.... ..+..
T Consensus 209 ~~vtae~tpHhL~l~~~~~~~~~~~~~~k~~PPlR~~~dr~aL~~al~~G~i~~~i~SDHaPh~~~~K~~~~g~~Gi~~~ 288 (364)
T PLN02599 209 GNVAATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHREALVKAATSGSKKFFLGTDSAPHPKRAKEASCGCAGIYSA 288 (364)
T ss_pred CCEEEEecHHHHhcCHHHHhccCCCCCeEEECCCCCHHHHHHHHHHHHcCCCCEEEecCCCCCChHHhcCCCCCCCcccH
Confidence 57788998853211 01 123 3366778884 89999998763110 11110
Q ss_pred -HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccc
Q 011766 357 -MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGS 405 (478)
Q Consensus 357 -~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~ 405 (478)
.....+.. ...+.+ +++++++.+|.|||+++|+..++|+
T Consensus 289 ~~~l~~l~~---------~~~~~g-~l~~l~~~~S~npA~~~gL~~~kg~ 328 (364)
T PLN02599 289 PVALSLYAK---------AFEEAG-ALDKLEAFTSFNGPDFYGLPRNTST 328 (364)
T ss_pred HHHHHHHHH---------HHHhcC-CHHHHHHHHhHHHHHHhCCCCCCCe
Confidence 00111100 001124 8999999999999999999435564
No 126
>cd01321 ADGF Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase.
Probab=98.45 E-value=5.3e-06 Score=78.50 Aligned_cols=154 Identities=14% Similarity=0.089 Sum_probs=102.5
Q ss_pred Eeccccc--cCCHHHHHHHHHHHHHcC--CceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCC-
Q 011766 224 FGIRQIM--NATDRLLLETRDMAREFK--TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN- 298 (478)
Q Consensus 224 ~~~~~~~--~~~~~~l~~~~~~a~~~~--~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~- 298 (478)
++..+.+ ..+.+....+++.|++.| +++.+|+.+........ .....+.+ ..+. ..|+||..+.
T Consensus 166 idL~G~E~~~~~~~~f~~~f~~ar~~g~~l~~t~HAGE~~~~~~~~------~~~v~~al-~lg~----~RIGHG~~~~~ 234 (345)
T cd01321 166 FDLVGQEDAGRPLLDFLPQLLWFPKQCAEIPFFFHAGETNGDGTET------DENLVDAL-LLNT----KRIGHGFALPK 234 (345)
T ss_pred EecCCCccCCCCHHHHHHHHHHHHHhCCCCceEeecCCCcCCCCCC------hhHHHHHH-HhCC----CcCccccccCc
Confidence 4444444 345677788899999999 99999999864200000 00011222 1222 3479999985
Q ss_pred -hhHHHHHHhcCCeEEECccchhhcc-----CCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccC
Q 011766 299 -HTEIGLLSRAGVKVSHCPASAMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFAN 372 (478)
Q Consensus 299 -~~~~~~~~~~~~~~~~~p~~~~~~~-----~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (478)
++.++.+++.++.+.+||.+|.... ...|++.++++|++++++||.+...+..++..+.+.+.....
T Consensus 235 dp~ll~~l~~~~I~lEvCPtSN~~~~~v~~~~~HPl~~ll~~Gv~vtinTDDp~~f~t~~l~~Ey~~~~~~~g------- 307 (345)
T cd01321 235 HPLLMDLVKKKNIAIEVCPISNQVLGLVSDLRNHPAAALLARGVPVVISSDDPGFWGAKGLSHDFYQAFMGLA------- 307 (345)
T ss_pred CHHHHHHHHHcCCeEEECcchhhhhccccchhhChHHHHHHCCCeEEEeCCCcchhCCCCchHHHHHHHHHhc-------
Confidence 8899999999999999999998652 346899999999999999999765333256666555442210
Q ss_pred CCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 011766 373 GTTDPAALPAETVLRMATINGAKSVLWD 400 (478)
Q Consensus 373 ~~~~~~~ls~~~al~~~T~~pA~~lgl~ 400 (478)
..+++.++.. .++.|+.+...++
T Consensus 308 ----~~~l~~~~l~-~l~~nsi~~sF~~ 330 (345)
T cd01321 308 ----PADAGLRGLK-QLAENSIRYSALS 330 (345)
T ss_pred ----cCCCCHHHHH-HHHHHHHHHHCCC
Confidence 0128888765 4556777766553
No 127
>COG1816 Add Adenosine deaminase [Nucleotide transport and metabolism]
Probab=98.41 E-value=6e-06 Score=76.63 Aligned_cols=140 Identities=19% Similarity=0.260 Sum_probs=99.0
Q ss_pred ccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccC--ChhHHHHHHh
Q 011766 230 MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV--NHTEIGLLSR 307 (478)
Q Consensus 230 ~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~--~~~~~~~~~~ 307 (478)
....++....+.+.++++|+.+.+|+.+...... ....+...+.- .|.||..+ .++.+.++++
T Consensus 180 ~~~p~~~f~~~f~~~r~~gl~lt~HaGE~~~~~~-----------i~~al~~~~~~----rI~HGi~~~~d~~L~~~l~~ 244 (345)
T COG1816 180 SGYPPELFVSLFKLARDNGLKLTIHAGEAGGPES-----------IRDALDLLGAE----RIGHGIRAIEDPELLYRLAE 244 (345)
T ss_pred ccCCHHHHHHHHHHHHHcCceEEEeccccCCcHH-----------HHHHHHHhchh----hhccccccccCHHHHHHHHH
Confidence 3457788999999999999999999986443221 11222222221 47888875 4678889999
Q ss_pred cCCeEEECccchhhc-----cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCH
Q 011766 308 AGVKVSHCPASAMRM-----LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPA 382 (478)
Q Consensus 308 ~~~~~~~~p~~~~~~-----~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~ 382 (478)
.++.+.+||.+|... -...|+++++++|++|+++||.+...+ .++..+...+.... +++.
T Consensus 245 ~qI~levCP~SNi~~~~v~~~~~hPf~~~~d~Gv~VsLnTDdp~~f~-~~l~~Ey~~aa~~~--------------~l~~ 309 (345)
T COG1816 245 RQIPLEVCPLSNIQLGVVPSLAKHPFKKLFDAGVKVSLNTDDPLYFG-TPLIEEYLVAAQIY--------------GLSR 309 (345)
T ss_pred hCCeeEECCcchhhcccccchhhCcHHHHHHcCCceEEcCCChhhcC-CchHHHHHHHHHHh--------------CCCH
Confidence 999999999999654 235689999999999999999977643 25666665554331 4788
Q ss_pred HHHHHHHhHHHHHHcCCC
Q 011766 383 ETVLRMATINGAKSVLWD 400 (478)
Q Consensus 383 ~~al~~~T~~pA~~lgl~ 400 (478)
+|+-+ .+.|+=+.-+++
T Consensus 310 ~dl~~-~arnav~~af~~ 326 (345)
T COG1816 310 EDLCE-LARNAVEAAFIS 326 (345)
T ss_pred HHHHH-HHHHHHHHccCC
Confidence 87664 455665555553
No 128
>PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3.5.4.4 from EC) catalyzes the hydrolytic deamination of adenosine into inosine and AMP deaminase (3.5.4.6 from EC) catalyzes the hydrolytic deamination of AMP into IMP. It has been shown [] that these two enzymes share three regions of sequence similarities; these regions are centred on residues which are proposed to play an important role in the catalytic mechanism of these two enzymes.; GO: 0019239 deaminase activity, 0009168 purine ribonucleoside monophosphate biosynthetic process; PDB: 3LGG_B 3LGD_B 2AMX_B 3EWD_A 2QVN_A 2PGF_A 2PGR_A 3EWC_A 1W1I_G 1O5R_A ....
Probab=98.27 E-value=1.1e-05 Score=76.85 Aligned_cols=135 Identities=20% Similarity=0.222 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCC--hhHHHHHHhcCCeE
Q 011766 235 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKV 312 (478)
Q Consensus 235 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~--~~~~~~~~~~~~~~ 312 (478)
.....+++.+++.|+++.+|+.+....... .+.+.. ++. ..|+||..+. ++.++++++.++.+
T Consensus 180 ~~~~~~~~~a~~~gl~~t~HaGE~~~~~~~-----------~~ai~~---l~~-~RIgHG~~~~~~p~l~~~~~~~~I~i 244 (331)
T PF00962_consen 180 LKFAPAFRKAREAGLKLTVHAGETGGPEHI-----------RDAILL---LGA-DRIGHGVRLIKDPELLELLAERQIPI 244 (331)
T ss_dssp GGHHHHHHHHHHTT-EEEEEESSSSTHHHH-----------HHHHHT---ST--SEEEE-GGGGGSHHHHHHHHHTT-EE
T ss_pred HHHHHHHhhhcccceeecceecccCCcccc-----------cchhhh---ccc-eeecchhhhhhhhHHHHHHHHhCCCe
Confidence 347778889999999999999986643221 122222 222 3589999874 67789999999999
Q ss_pred EECccchhhcc-----CCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHH
Q 011766 313 SHCPASAMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLR 387 (478)
Q Consensus 313 ~~~p~~~~~~~-----~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~ 387 (478)
.+||.+|.... ...|++.++++|++|+++||.+... ..++..+...+.... ++|.++..
T Consensus 245 EvcptSN~~~~~~~~~~~hP~~~~~~~gv~v~i~TDd~~~~-~~~l~~ey~~~~~~~--------------~l~~~~l~- 308 (331)
T PF00962_consen 245 EVCPTSNVQLGAVPSYEEHPLRKLLDAGVPVSINTDDPGVF-GTTLSDEYYLAAEAF--------------GLSLADLK- 308 (331)
T ss_dssp EE-HHHHHHTTSSSTGGG-CHHHHHHTT-EEEE--BSHHHH-T-SHHHHHHHHHHHH--------------T--HHHHH-
T ss_pred eeCCCcCcccceeeecchhHHHHHHHcCCceeccCCCcccc-CCCcHHHHHHHHHHc--------------CCCHHHHH-
Confidence 99999998762 2469999999999999999986432 234556655554332 48888755
Q ss_pred HHhHHHHHHcCCC
Q 011766 388 MATINGAKSVLWD 400 (478)
Q Consensus 388 ~~T~~pA~~lgl~ 400 (478)
.+..|+.+...++
T Consensus 309 ~l~~nsi~~sf~~ 321 (331)
T PF00962_consen 309 QLARNSIEASFLS 321 (331)
T ss_dssp HHHHHHHHCSSS-
T ss_pred HHHHHHHHHHcCC
Confidence 4555777766553
No 129
>PF02126 PTE: Phosphotriesterase family; InterPro: IPR001559 Synonym(s): Paraoxonase, A-esterase, Aryltriphosphatase, Phosphotriesterase, Paraoxon hydrolase Bacteria such as Brevundimonas diminuta (Pseudomonas diminuta) harbour a plasmid that carries the gene for Aryldialkylphosphatase (3.1.8.1 from EC) (PTE) (also known as parathion hydrolase). This enzyme has attracted interest because of its potential use in the detoxification of chemical waste and warfare agents and its ability to degrade agricultural pesticides such as parathion. It acts specifically on synthetic organophosphate triesters and phosphorofluoridates. It does not seem to have a natural occuring substrate and may thus have optimally evolved for utilizing paraoxon. Aryldialkylphosphatase belongs to a family [, ] of enzymes that possess a binuclear zinc metal centre at their active site. The two zinc ions are coordinated by six different residues, six of which being histidines. This family so far includes, in addition to the parathion hydrolase, the following proteins: Escherichia coli protein Php, the substrate of which is not yet known. Mycobacterium tuberculosis phosphotriesterase homology protein Rv0230C. Mammalian phosphotriesterase related protein (PTER) (RPR-1). ; GO: 0008270 zinc ion binding, 0016788 hydrolase activity, acting on ester bonds, 0009056 catabolic process; PDB: 3MSR_A 3OVG_D 3K2G_C 1BF6_B 3OQE_A 3C86_A 3SO7_A 2D2G_A 2R1P_A 2D2H_A ....
Probab=98.24 E-value=2.4e-05 Score=72.34 Aligned_cols=233 Identities=12% Similarity=0.092 Sum_probs=129.2
Q ss_pred HHHHHHHHHHHHhcCcceeecCC----ccCHHHHHHHHHHhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCcccc
Q 011766 124 YISTLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFN 199 (478)
Q Consensus 124 ~~~~~~~~~~~l~~GvTtv~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (478)
........+.+...|..|++|+. +..+..+.+..+..|++...+..++.... .| .|....+.+
T Consensus 37 ~~~~~~El~~~k~~Gg~tiVd~T~~g~GRd~~~l~~is~~tGv~II~~TG~y~~~~-~p-~~~~~~s~e----------- 103 (308)
T PF02126_consen 37 VEAAVAELKEFKAAGGRTIVDATPIGLGRDVEALREISRRTGVNIIASTGFYKEPF-YP-EWVREASVE----------- 103 (308)
T ss_dssp HHHHHHHHHHHHHTTEEEEEE--SGGGTB-HHHHHHHHHHHT-EEEEEEEE-SGGC-SC-HHHHTSHHH-----------
T ss_pred HHHHHHHHHHHHHcCCCEEEecCCcccCcCHHHHHHHHHHhCCeEEEeCCCCcccc-CC-hhhhcCCHH-----------
Confidence 34444556677889999999853 34567778888999999987766553221 12 111111111
Q ss_pred ccchhHH-HHHHHhcCC------CCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCCh-hhhHHHhhhcCC
Q 011766 200 FVSSSQK-ELYAKHHHA------ADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP-YENQVVMDTRKV 271 (478)
Q Consensus 200 ~~~~~~~-~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~-~~~~~~~~~~~~ 271 (478)
+.. .++++.... ..+.++.......+.......++++....++.|+++++|..... ...+
T Consensus 104 ----~la~~~i~Ei~~GidgT~ikaG~Ik~~~~~~~it~~E~k~lrAaa~A~~~TG~pI~~H~~~g~~~~~e-------- 171 (308)
T PF02126_consen 104 ----ELADLFIREIEEGIDGTGIKAGIIKEIGSSNPITPLEEKVLRAAARAHKETGAPISTHTGRGTRMGLE-------- 171 (308)
T ss_dssp ----HHHHHHHHHHHT-STTSSB-ESEEEEEEBTTBCEHHHHHHHHHHHHHHHHHT-EEEEEESTTGTCHHH--------
T ss_pred ----HHHHHHHHHHHhcCCCCccchhheeEeeccCCCCHHHHHHHHHHHHHHHHhCCeEEEcCCCCCcCHHH--------
Confidence 222 222332221 12345443333233333344677777888888999999997665 2211
Q ss_pred CCchHHHHhhhCCCCCCeeeeeeccCCh-hHHHHHHhcCCeEEECcc------chh------hc--cCCCcHHHHHHCCC
Q 011766 272 DHGTVTFLDKIEFLQNNLLSAHTVWVNH-TEIGLLSRAGVKVSHCPA------SAM------RM--LGFAPIKEMLHADI 336 (478)
Q Consensus 272 ~~~~~~~l~~~~~~~~~~~i~h~~~~~~-~~~~~~~~~~~~~~~~p~------~~~------~~--~~~~~~~~~~~~gv 336 (478)
.++++.+.+.-..+++++|.....+ +.+..+++.|+.+.+--. ... .. .....+..|+++|.
T Consensus 172 ---~~~il~e~Gv~~~rvvigH~D~~~D~~y~~~la~~G~~l~~D~~g~~~~g~~~~~~~~~~~d~~ri~~l~~L~~~Gy 248 (308)
T PF02126_consen 172 ---QLDILEEEGVDPSRVVIGHMDRNPDLDYHRELADRGVYLEFDTIGREFSGKDKNPRVGYPPDEERIELLKELIEEGY 248 (308)
T ss_dssp ---HHHHHHHTT--GGGEEETSGGGST-HHHHHHHHHTT-EEEETTTT-B-TTTTTCHSCTTS-HHHHHHHHHHHHHTTT
T ss_pred ---HHHHHHHcCCChhHeEEeCCCCCCCHHHHHHHHhcCCEEEecCCcccccCcccCccCCCCCHHHHHHHHHHHHHcCC
Confidence 3567788888888999999885433 466788889998876322 110 00 12345678889984
Q ss_pred --cEEEcCCCCC--CCC-------CcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 011766 337 --CVSLGTDGAP--SNN-------RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 397 (478)
Q Consensus 337 --~v~~gsD~~~--~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~l 397 (478)
.+.++.|... ... ...+.-.-....+. +.|+|.+++=++...||+++|
T Consensus 249 ~~qIlLS~D~~~k~~~~~~gg~g~~~~~i~~~fiP~L~-------------~~Gv~~~~i~~ilv~NP~r~l 307 (308)
T PF02126_consen 249 ADQILLSHDIGRKSRLYRYGGGGYGYIYILTRFIPRLK-------------ERGVSEEDIDKILVENPARIL 307 (308)
T ss_dssp GGGEEE-HHHESEEGSSSCCHHHHTTTHHHHTHHHHHH-------------HTTS-HHHHHHHHTHHHHHHH
T ss_pred cCcEEEeccccccccccccCCCCccHHHHHHHHHHHHH-------------HcCCCHHHHHHHHHHCHHHHc
Confidence 7999998543 000 01111011111111 237999999999999999986
No 130
>PRK10812 putative DNAse; Provisional
Probab=98.12 E-value=0.0011 Score=60.46 Aligned_cols=139 Identities=13% Similarity=0.062 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEE
Q 011766 235 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 314 (478)
Q Consensus 235 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~ 314 (478)
+.+++.+++|.++++++.+|.-..... ..+.+...+.... ..+.|+..-+.+.++++.+.|..+.+
T Consensus 111 ~vf~~ql~lA~e~~~Pv~iH~r~a~~~-------------~l~iL~~~~~~~~-~~v~H~fsG~~~~a~~~~~~G~~is~ 176 (265)
T PRK10812 111 ESFRHHIQIGRELNKPVIVHTRDARAD-------------TLAILREEKVTDC-GGVLHCFTEDRETAGKLLDLGFYISF 176 (265)
T ss_pred HHHHHHHHHHHHhCCCeEEEeeCchHH-------------HHHHHHhhcCCCC-CEEEEeecCCHHHHHHHHHCCCEEEE
Confidence 457777899999999999998653321 2334443322222 24579998788999999999998888
Q ss_pred CccchhhccCCCcHHHHHHCC--CcEEEcCCCCCCCC------CcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 011766 315 CPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNN------RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 386 (478)
Q Consensus 315 ~p~~~~~~~~~~~~~~~~~~g--v~v~~gsD~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al 386 (478)
.....+ .....++++++.. -++.+-||++...+ ...+..-...+..+.. -.+++.+++.
T Consensus 177 ~g~~t~--~~~~~~~~~~~~ipldrlLlETD~P~~~p~~~~g~~n~P~~i~~v~~~ia~-----------l~g~~~eei~ 243 (265)
T PRK10812 177 SGIVTF--RNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAV-----------LKGVSVEELA 243 (265)
T ss_pred Ceeeec--CccHHHHHHHHhCChhhEEEecCCCCCCCcCCCCCCCCcHHHHHHHHHHHH-----------HhCCCHHHHH
Confidence 753321 1233466777665 47889999863210 0011111111111111 0259999999
Q ss_pred HHHhHHHHHHcCCC
Q 011766 387 RMATINGAKSVLWD 400 (478)
Q Consensus 387 ~~~T~~pA~~lgl~ 400 (478)
+..+.|+.+++++.
T Consensus 244 ~~~~~N~~~lf~~~ 257 (265)
T PRK10812 244 QVTTDNFARLFHID 257 (265)
T ss_pred HHHHHHHHHHHCCC
Confidence 99999999999984
No 131
>PRK11449 putative deoxyribonuclease YjjV; Provisional
Probab=98.11 E-value=0.00037 Score=63.36 Aligned_cols=138 Identities=11% Similarity=0.059 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEE
Q 011766 234 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS 313 (478)
Q Consensus 234 ~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~ 313 (478)
.+.+.+.+++|.+++++|.+|+-..... ..+.+...+. .+..+-|+..=+.+..+.+.+.|..+.
T Consensus 113 ~~vf~~ql~lA~~~~~Pv~iH~r~a~~~-------------~~~il~~~~~--~~~~i~H~fsG~~~~a~~~l~~G~~iS 177 (258)
T PRK11449 113 QWLLDEQLKLAKRYDLPVILHSRRTHDK-------------LAMHLKRHDL--PRTGVVHGFSGSLQQAERFVQLGYKIG 177 (258)
T ss_pred HHHHHHHHHHHHHhCCCEEEEecCccHH-------------HHHHHHhcCC--CCCeEEEcCCCCHHHHHHHHHCCCEEE
Confidence 3457777899999999999999763322 2334443332 123578998888999999999999988
Q ss_pred ECccchhhccCCCcHHHHHHCC--CcEEEcCCCCCCCCC------cCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHH
Q 011766 314 HCPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNNR------MSIVDEMYLASLINKGREVFANGTTDPAALPAETV 385 (478)
Q Consensus 314 ~~p~~~~~~~~~~~~~~~~~~g--v~v~~gsD~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~a 385 (478)
+.+..... .....++++..= -.+.+.||+|..... ..+..-......... -.+++.++.
T Consensus 178 ~~g~it~~--~~~~~~~~~~~ipldriL~ETD~P~l~p~~~~~~~n~p~~~~~~~~~ia~-----------l~~~~~~el 244 (258)
T PRK11449 178 VGGTITYP--RASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFDVLCE-----------LRPEPADEI 244 (258)
T ss_pred eCcccccc--CcHHHHHHHHhCChhhEEEecCCCCCCCCCCCCCCCCChHHHHHHHHHHH-----------HHCcCHHHH
Confidence 87654322 112344444321 258899998642100 001111111111111 015899999
Q ss_pred HHHHhHHHHHHcCC
Q 011766 386 LRMATINGAKSVLW 399 (478)
Q Consensus 386 l~~~T~~pA~~lgl 399 (478)
.+..+.|..+++++
T Consensus 245 ~~~~~~N~~~lf~~ 258 (258)
T PRK11449 245 AEVLLNNTYTLFNV 258 (258)
T ss_pred HHHHHHHHHHHhCc
Confidence 99999999999874
No 132
>COG1735 Php Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=98.03 E-value=0.0015 Score=58.53 Aligned_cols=242 Identities=15% Similarity=0.091 Sum_probs=132.4
Q ss_pred HHHHHHHHHHHHHHhcCcceeecCC----ccCHHHHHHHHHHhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCcc
Q 011766 122 DSYISTLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSIS 197 (478)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTtv~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (478)
+............++.|+-|++|+- +..+..+.+..+..|++...+..++.... .+ .|..... ++
T Consensus 45 ~~~a~~~~e~~~~~a~Gg~TIVD~T~~~~GRdv~~m~~vs~atglnIV~~TGfy~~~~-~p-~~~~~~~---i~------ 113 (316)
T COG1735 45 DEVALAIAELKRLMARGGQTIVDATNIGIGRDVLKMRRVAEATGLNIVAATGFYKAAF-HP-EYFALRP---IE------ 113 (316)
T ss_pred HHHHHHHHHHHHHHHcCCCeEeeCCccccCcCHHHHHHHHHHhCCcEEEecccccccc-ch-hHHhhCC---HH------
Confidence 4444455566778889999999853 45577788888999999977655543322 11 1111111 11
Q ss_pred ccccchhHHHH-HHHhcCC------CCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcC
Q 011766 198 FNFVSSSQKEL-YAKHHHA------ADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK 270 (478)
Q Consensus 198 ~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~ 270 (478)
+..++ +++.... ..+.++...+...+-...+..+.++.+..++.|.|+++|........+
T Consensus 114 ------~~ae~~v~ei~~Gi~gT~ikAGiIk~~~~~~~iTp~Eek~lrAaA~A~~~Tg~Pi~tHt~~gt~g~e------- 180 (316)
T COG1735 114 ------ELAEFVVKEIEEGIAGTGIKAGIIKEAGGSPAITPLEEKSLRAAARAHKETGAPISTHTPAGTMGLE------- 180 (316)
T ss_pred ------HHHHHHHHHHHhcccCCccccceeeeccCcccCCHHHHHHHHHHHHHhhhcCCCeEEeccchhhhHH-------
Confidence 22222 3333221 123344333333322223345666667778889999999987663222
Q ss_pred CCCchHHHHhhhCCCCCCeeeeeec-cCChhHH-HHHHhcCCeEEECccch--hhc--cCCCcHHHHHHCCC--cEEEcC
Q 011766 271 VDHGTVTFLDKIEFLQNNLLSAHTV-WVNHTEI-GLLSRAGVKVSHCPASA--MRM--LGFAPIKEMLHADI--CVSLGT 342 (478)
Q Consensus 271 ~~~~~~~~l~~~~~~~~~~~i~h~~-~~~~~~~-~~~~~~~~~~~~~p~~~--~~~--~~~~~~~~~~~~gv--~v~~gs 342 (478)
..+++.+.++--.++.++|+. ..++... +.++..|+.+.+--... +.. ....+..++.++|. .+.++-
T Consensus 181 ----q~~il~~egvdl~~v~igH~d~n~dd~~y~~~l~~~Ga~l~fD~iG~d~y~pd~~r~~~~~~l~~~gy~d~i~ls~ 256 (316)
T COG1735 181 ----QLRILAEEGVDLRKVSIGHMDPNTDDVYYQKKLADRGAFLEFDRIGKDKYYPDEDRIAPLLELVARGYADLILLSH 256 (316)
T ss_pred ----HHHHHHHcCCChhHeeEeccCCCCChHHHHHHHHhcCceEEecccCccccCcHHHhhhhHHHHHHhhHhhheeccc
Confidence 356677777766789999998 4444444 45555687765432211 111 33567788888884 455652
Q ss_pred C-CCCCCCCcCHHHHHHHHHHHhcccccccCCC--------CCCCCCCHHHHHHHHhHHHHHHcCC
Q 011766 343 D-GAPSNNRMSIVDEMYLASLINKGREVFANGT--------TDPAALPAETVLRMATINGAKSVLW 399 (478)
Q Consensus 343 D-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ls~~~al~~~T~~pA~~lgl 399 (478)
| +... .+.+.. ..... . ..+..++ +.+.|++.++.=.+.--||+++|..
T Consensus 257 d~~~~~---~~~~~~--~~~~~-~--~~~g~~~I~~~fIP~Lk~~Gvde~~i~~mlvdNP~r~f~~ 314 (316)
T COG1735 257 DDICLS---DDVFLK--SMLKA-N--GGWGYGYILNDFIPRLKRHGVDEETIDTMLVDNPARLFTA 314 (316)
T ss_pred chhhhh---hhHHHH--hhhhh-c--CCcccchhhHhhHHHHHHcCCCHHHHHHHHhhCHHHHhcc
Confidence 2 2111 111111 00000 0 0000001 2356899666666888899999864
No 133
>TIGR01431 adm_rel adenosine deaminase-related growth factor. Members of this family have been described as secreted proteins with growth factor activity and regions of adenosine deaminase homology in insects, mollusks, and vertebrates.
Probab=98.01 E-value=0.00011 Score=72.45 Aligned_cols=154 Identities=13% Similarity=0.148 Sum_probs=96.4
Q ss_pred Eeccccc--cCCHHHHHHHH-HHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCC--
Q 011766 224 FGIRQIM--NATDRLLLETR-DMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN-- 298 (478)
Q Consensus 224 ~~~~~~~--~~~~~~l~~~~-~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~-- 298 (478)
+++.+.+ ..+.......+ ..++..|+++.+|+.+....... ....+.++. .++. ..|+||..+.
T Consensus 293 fDL~G~E~~g~pl~~f~~~~~~~~~~~gl~~t~HAGE~~~~g~~---------~d~nl~dAI-lLg~-~RIGHG~~l~~~ 361 (479)
T TIGR01431 293 FDLVGQEDKGRSLLDFIDALLGPSDKEKLPYFFHAGETNWQGTT---------VDENLIDAL-LLNT-TRIGHGFALVKH 361 (479)
T ss_pred EeccCCCCCCCCHHHHHHHHHHHHHhCCCCEEEecCCcCCCCCC---------chhHHHHHH-HcCC-ccccCcccccCC
Confidence 4444443 23444444444 45666899999999986421100 011222222 2222 3479999985
Q ss_pred hhHHHHHHhcCCeEEECccchhhc-----cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCC
Q 011766 299 HTEIGLLSRAGVKVSHCPASAMRM-----LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANG 373 (478)
Q Consensus 299 ~~~~~~~~~~~~~~~~~p~~~~~~-----~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (478)
|+.++.+++.++.+.+||.+|..+ ....|++.++++|++++++||.+...+...+..+.+.+.....
T Consensus 362 P~l~~~vke~~I~lEvCP~SN~~l~~v~~~~~HPl~~lla~Gvpv~InSDDP~~~~~t~Ls~ef~~a~~~~~-------- 433 (479)
T TIGR01431 362 PLVLQMLKERNIAVEVNPISNQVLQLVADLRNHPCAYLFADNYPMVISSDDPAFWGATPLSHDFYIAFMGLA-------- 433 (479)
T ss_pred HHHHHHHHHhCCeEEECccchhhhcccCCcccChHHHHHHCCCcEEEeCCCccccCCCCchHHHHHHHHHhc--------
Confidence 889999999999999999999865 2346899999999999999999765332235555554443210
Q ss_pred CCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 011766 374 TTDPAALPAETVLRMATINGAKSVLWD 400 (478)
Q Consensus 374 ~~~~~~ls~~~al~~~T~~pA~~lgl~ 400 (478)
...+++ +-++.+..|..+...++
T Consensus 434 ---~~~~~l-~~L~~la~NSi~~Sfl~ 456 (479)
T TIGR01431 434 ---SAKADL-RTLKQLALNSIKYSALS 456 (479)
T ss_pred ---ccCCCH-HHHHHHHHHHHHHHCCC
Confidence 001455 34556666777766664
No 134
>KOG1097 consensus Adenine deaminase/adenosine deaminase [Nucleotide transport and metabolism]
Probab=97.96 E-value=0.00039 Score=64.92 Aligned_cols=141 Identities=22% Similarity=0.260 Sum_probs=92.6
Q ss_pred CHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhH--HHHHHhcCC
Q 011766 233 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE--IGLLSRAGV 310 (478)
Q Consensus 233 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~--~~~~~~~~~ 310 (478)
+..........+.+.|+++.+|+.+....... ....++ .++ ...|+||.++.++. +.++++.++
T Consensus 225 p~~~f~~vl~~~~~~gi~~t~HaGE~~~~~~~----------v~~~LD---~l~-~~RIGHG~~l~~dp~L~~~~k~~nI 290 (399)
T KOG1097|consen 225 PLSLFLEVLAKAPAKGIHLTFHAGETNGGASV----------VKNALD---LLG-TERIGHGYFLTKDPELINLLKSRNI 290 (399)
T ss_pred ChhhhHHHHHhhhhcCCcEEEEccccCCChHH----------HHHHHH---hhC-CccccCceeccCCHHHHHHHHhcCc
Confidence 44455566666666899999999887521111 112333 222 24589999987554 999999999
Q ss_pred eEEECccchhhc-----cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHH
Q 011766 311 KVSHCPASAMRM-----LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETV 385 (478)
Q Consensus 311 ~~~~~p~~~~~~-----~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~a 385 (478)
.+.+||.+|... -...|++.++++|+++.++||.+....+..+..+.+.+.... ..+++.++.
T Consensus 291 ~lEiCP~SN~vl~~v~d~rnhp~~~~~~~~vP~vI~sDDP~~f~~~~Lt~dfy~A~~~~------------~~~~~~~~l 358 (399)
T KOG1097|consen 291 ALEICPISNQVLGLVSDLRNHPVARLLAAGVPVVINSDDPGFFGAAPLTLDFYLAFLGI------------APNLDLREL 358 (399)
T ss_pred eEEEccchhhheeccccccccHHHHHHhCCCCEEEeCCCcccccCccccHHHHHHHHhc------------cccCCHHHH
Confidence 999999999765 235689999999999999999876533322222333333211 114778876
Q ss_pred HHHHhHHHHHHcCCC
Q 011766 386 LRMATINGAKSVLWD 400 (478)
Q Consensus 386 l~~~T~~pA~~lgl~ 400 (478)
.+ ++.|+++..-+.
T Consensus 359 ~~-la~nai~~S~l~ 372 (399)
T KOG1097|consen 359 KR-LALNAIKYSFLS 372 (399)
T ss_pred HH-HHHHHhhhccCC
Confidence 65 445777776654
No 135
>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only]
Probab=97.92 E-value=0.0017 Score=55.32 Aligned_cols=148 Identities=12% Similarity=0.109 Sum_probs=87.6
Q ss_pred EeccccccCCHH---HHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChh
Q 011766 224 FGIRQIMNATDR---LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHT 300 (478)
Q Consensus 224 ~~~~~~~~~~~~---~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~ 300 (478)
+|-.+....+++ .+.+-+++|+++++++.+|.....-..... ...+.+...+.-....++.|+ +.+
T Consensus 100 iGEiGLe~~t~~E~evf~~QL~LA~e~dvPviVHTPr~nK~e~t~--------~ildi~~~~~l~~~lvvIDH~---N~e 168 (254)
T COG1099 100 IGEIGLEEATDEEKEVFREQLELARELDVPVIVHTPRRNKKEATS--------KILDILIESGLKPSLVVIDHV---NEE 168 (254)
T ss_pred eeecccccCCHHHHHHHHHHHHHHHHcCCcEEEeCCCCcchhHHH--------HHHHHHHHcCCChhheehhcc---cHH
Confidence 333344444444 466667899999999999996543222111 134555556655555666665 457
Q ss_pred HHHHHHhcCCe--EEECccchhhccCCCcHHHHHHCC-CcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCC
Q 011766 301 EIGLLSRAGVK--VSHCPASAMRMLGFAPIKEMLHAD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDP 377 (478)
Q Consensus 301 ~~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~g-v~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (478)
..+.+...+.. +.++|. .+.....+.-..+.| -++.+.||..... .+++.--+.+.... .
T Consensus 169 tv~~vld~e~~vGlTvqPg---Klt~~eAveIV~ey~~~r~ilnSD~~s~~--sd~lavprtal~m~------------~ 231 (254)
T COG1099 169 TVDEVLDEEFYVGLTVQPG---KLTVEEAVEIVREYGAERIILNSDAGSAA--SDPLAVPRTALEME------------E 231 (254)
T ss_pred HHHHHHhccceEEEEecCC---cCCHHHHHHHHHHhCcceEEEeccccccc--ccchhhhHHHHHHH------------H
Confidence 77777776655 455663 112223334445667 6899999975432 23333222222221 2
Q ss_pred CCCCHHHHHHHHhHHHHHHcCC
Q 011766 378 AALPAETVLRMATINGAKSVLW 399 (478)
Q Consensus 378 ~~ls~~~al~~~T~~pA~~lgl 399 (478)
.|++.++.-+.+-.|+-+++|+
T Consensus 232 ~gv~~~~i~kV~~~NA~~~~~l 253 (254)
T COG1099 232 RGVGEEEIEKVVRENALSFYGL 253 (254)
T ss_pred hcCCHHHHHHHHHHHHHHHhCc
Confidence 3688998888888888888876
No 136
>PRK10425 DNase TatD; Provisional
Probab=97.76 E-value=0.0018 Score=58.83 Aligned_cols=139 Identities=13% Similarity=-0.021 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEE
Q 011766 235 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 314 (478)
Q Consensus 235 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~ 314 (478)
+.+++-+++|.++++|+.+|.-+.... ..+.+.... ......+.|+..=+.+.++++.+.|..+.+
T Consensus 108 ~vF~~ql~lA~~~~~Pv~iH~r~a~~~-------------~l~iL~~~~-~~~~~~i~H~fsG~~~~~~~~l~~G~~~si 173 (258)
T PRK10425 108 RAFVAQLAIAAELNMPVFMHCRDAHER-------------FMALLEPWL-DKLPGAVLHCFTGTREEMQACLARGLYIGI 173 (258)
T ss_pred HHHHHHHHHHHHhCCCeEEEEeCchHH-------------HHHHHHHhc-cCCCCeEEEecCCCHHHHHHHHHCCCEEEE
Confidence 456777899999999999999753321 233344321 111124679998899999999999999888
Q ss_pred CccchhhccCCCcHHHHHHC-C-CcEEEcCCCCCCCC----------CcCHHHHHHHHHHHhcccccccCCCCCCCCCCH
Q 011766 315 CPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNN----------RMSIVDEMYLASLINKGREVFANGTTDPAALPA 382 (478)
Q Consensus 315 ~p~~~~~~~~~~~~~~~~~~-g-v~v~~gsD~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~ 382 (478)
.+...... ....++++++. . -.+.+-||+|.... ...+..-...+..+.+ -.+++.
T Consensus 174 ~g~i~~~~-~~~~~~~~~~~ipldrlLlETDaP~l~P~~~~~~~~~~~n~P~~i~~v~~~iA~-----------l~~~~~ 241 (258)
T PRK10425 174 TGWVCDER-RGLELRELLPLIPAERLLLETDAPYLLPRDLTPKPASRRNEPAFLPHILQRIAH-----------WRGEDA 241 (258)
T ss_pred Cceeeccc-ccHHHHHHHHhCChHHEEEeccCCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHH-----------HHCcCH
Confidence 76432111 11123444432 1 25778899863211 0112211111221111 125999
Q ss_pred HHHHHHHhHHHHHHcCC
Q 011766 383 ETVLRMATINGAKSVLW 399 (478)
Q Consensus 383 ~~al~~~T~~pA~~lgl 399 (478)
+++.+..+.|.-+++++
T Consensus 242 ~~v~~~~~~N~~~lf~~ 258 (258)
T PRK10425 242 AWLAATTDANARTLFGL 258 (258)
T ss_pred HHHHHHHHHHHHHHhCc
Confidence 99999999999998874
No 137
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=97.72 E-value=0.0035 Score=56.33 Aligned_cols=137 Identities=15% Similarity=0.073 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEE
Q 011766 235 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 314 (478)
Q Consensus 235 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~ 314 (478)
+...+-+++|++.++|+.+|.-+.... ..+.+..... ....+-||..=+.+..+++.+.|..+.+
T Consensus 112 ~~F~~ql~lA~~~~lPviIH~R~A~~d-------------~~~iL~~~~~--~~~gi~HcFsGs~e~a~~~~d~G~yisi 176 (256)
T COG0084 112 EVFEAQLELAKELNLPVIIHTRDAHED-------------TLEILKEEGA--PVGGVLHCFSGSAEEARKLLDLGFYISI 176 (256)
T ss_pred HHHHHHHHHHHHcCCCEEEEccccHHH-------------HHHHHHhcCC--CCCEEEEccCCCHHHHHHHHHcCeEEEE
Confidence 346666799999999999999764332 2334444433 3445789999999999999999988887
Q ss_pred CccchhhccCCCcHHHHHHCC--CcEEEcCCCCCCCC------CcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 011766 315 CPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNN------RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 386 (478)
Q Consensus 315 ~p~~~~~~~~~~~~~~~~~~g--v~v~~gsD~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al 386 (478)
.....+.. ....++++..= -++.+=||+|.... ...+..-...+..+... .+++.++..
T Consensus 177 sG~itfk~--a~~~~ev~~~iPldrLL~ETDsPyl~P~p~rGkrNeP~~v~~v~~~iAel-----------k~~~~eeva 243 (256)
T COG0084 177 SGIVTFKN--AEKLREVARELPLDRLLLETDAPYLAPVPYRGKRNEPAYVRHVAEKLAEL-----------KGISAEEVA 243 (256)
T ss_pred CceeecCC--cHHHHHHHHhCCHhHeEeccCCCCCCCcCCCCCCCCchHHHHHHHHHHHH-----------hCCCHHHHH
Confidence 76654332 11223332221 13556699863311 00111111111112111 259999999
Q ss_pred HHHhHHHHHHcCC
Q 011766 387 RMATINGAKSVLW 399 (478)
Q Consensus 387 ~~~T~~pA~~lgl 399 (478)
+..|.|.-+++++
T Consensus 244 ~~t~~N~~~lf~~ 256 (256)
T COG0084 244 EITTENAKRLFGL 256 (256)
T ss_pred HHHHHHHHHHhcC
Confidence 9999999998874
No 138
>PF01026 TatD_DNase: TatD related DNase The Pfam entry finds members not in the Prosite definition.; InterPro: IPR001130 This family of proteins are related to a large superfamily of metalloenzymes []. TatD, a member of this family has been shown experimentally to be a DNase enzyme []. Allantoinase 3.5.2.5 from EC, N-isopropylammelide isopropyl amidohydrolase 3.5.1 from EC and the SCN1 protein from fission yeast belong to this family.; GO: 0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters; PDB: 3E2V_B 1XWY_A 3GUW_D 3RCM_A 1ZZM_A 2XIO_A 1J6O_A 2GZX_A 3IPW_A 2Y1H_A ....
Probab=97.62 E-value=0.0025 Score=58.12 Aligned_cols=134 Identities=15% Similarity=0.096 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEE
Q 011766 235 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 314 (478)
Q Consensus 235 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~ 314 (478)
+.+.+.+++|+++++++.+|+-..... ..+.+...+.. ....+-|+..-+.++++.+.+.|..+++
T Consensus 111 ~vF~~ql~lA~~~~~pv~iH~r~a~~~-------------~l~il~~~~~~-~~~~i~H~f~g~~~~~~~~~~~g~~~S~ 176 (255)
T PF01026_consen 111 EVFERQLELAKELNLPVSIHCRKAHEE-------------LLEILKEYGPP-NLRVIFHCFSGSPEEAKKFLDLGCYFSF 176 (255)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEESHHHH-------------HHHHHHHTTGG-TSEEEETT--S-HHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHhCCcEEEecCCcHHH-------------HHHHHHhcccc-ceeEEEecCCCCHHHHHHHHhcCceEEe
Confidence 457777899999999999999773221 34455555522 2256789988889999999999999998
Q ss_pred CccchhhccCCCcHHHHHHCC--CcEEEcCCCCCCCC---------CcCHHHHHHHHHHHhcccccccCCCCCCCCCCHH
Q 011766 315 CPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNN---------RMSIVDEMYLASLINKGREVFANGTTDPAALPAE 383 (478)
Q Consensus 315 ~p~~~~~~~~~~~~~~~~~~g--v~v~~gsD~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~ 383 (478)
.+....+. ....++++..= -.+.+-||+|.... +............. .+++++
T Consensus 177 ~~~~~~~~--~~~~~~~~~~ip~drillETD~P~~~~~~~~~~~~~p~~i~~~~~~la~~--------------~~~~~e 240 (255)
T PF01026_consen 177 SGAITFKN--SKKVRELIKAIPLDRILLETDAPYLAPDPYRGKPNEPSNIPKVAQALAEI--------------KGISLE 240 (255)
T ss_dssp EGGGGSTT--SHHHHHHHHHS-GGGEEEE-BTTSSECTTSTTSE--GGGHHHHHHHHHHH--------------HTSTHH
T ss_pred cccccccc--cHHHHHHHhcCChhhEEEcCCCCcCCccccCCCCCChHHHHHHHHHHHHH--------------cCCCHH
Confidence 87644321 22345554332 36889999753211 11112222211111 159999
Q ss_pred HHHHHHhHHHHHHcC
Q 011766 384 TVLRMATINGAKSVL 398 (478)
Q Consensus 384 ~al~~~T~~pA~~lg 398 (478)
++.+....|..+++|
T Consensus 241 ~~~~~~~~N~~r~f~ 255 (255)
T PF01026_consen 241 ELAQIIYENAKRLFG 255 (255)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999999999875
No 139
>PF07908 D-aminoacyl_C: D-aminoacylase, C-terminal region; InterPro: IPR012855 D-aminoacylase (Q9AGH8 from SWISSPROT, 3.5.1.81 from EC) hydrolyses a wide variety of N-acyl derivatives of neutral D-amino acids, in a zinc-dependent manner. The enzyme is composed of a small beta-barrel domain and a larger catalytic alpha/beta-barrel that contains a short alpha/beta insert. The overall structure shares significant similarity to the alpha/beta-barrel amidohydrolase superfamily, in which the beta-strands in both barrels superimpose well []. The C-terminal region featured in this entry forms part of the beta-barrel domain, together with a short N-terminal segment. This domain does not seem to contribute to the substrate-binding site or to be involved in the catalytic process.; GO: 0008270 zinc ion binding, 0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; PDB: 3GIQ_B 3GIP_B 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A.
Probab=97.42 E-value=0.0001 Score=47.15 Aligned_cols=31 Identities=26% Similarity=0.385 Sum_probs=22.3
Q ss_pred CCCeeEEEEccEEEEECCeeecccHHHHHHH
Q 011766 440 TENVVSVMCNGQWVMKNKKILLLMRGRLFQL 470 (478)
Q Consensus 440 ~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~ 470 (478)
...|.+|||||++++++|++++..+|+++++
T Consensus 17 ~~GI~~V~VNG~~vv~~g~~t~~~~G~~lrr 47 (48)
T PF07908_consen 17 AEGIDYVFVNGQIVVEDGEVTGARPGRVLRR 47 (48)
T ss_dssp -BSEEEEEETTEEEECTTEESSS----B---
T ss_pred CCCEEEEEECCEEEEECCeECCCCCCeEecC
Confidence 4689999999999999999999999999875
No 140
>PF00449 Urease_alpha: Urease alpha-subunit, N-terminal domain; InterPro: IPR011612 Urease (urea amidohydrolase, 3.5.1.5 from EC) catalyses the hydrolysis of urea to form ammonia and carbamate. The subunit composition of urease from different sources varies [], but each holoenzyme consists of four structural domains []: three structural domains and a nickel-binding catalytic domain common to amidohydrolases []. Urease is unique among nickel metalloenzymes in that it catalyses a hydrolysis rather than a redox reaction. In Helicobacter pylori, the gamma and beta domains are fused and called the alpha subunit (IPR008223 from INTERPRO). The catalytic subunit (called beta or B) has the same organisation as the Klebsiella alpha subunit. Jack bean (Canavalia ensiformis) urease has a fused gamma-beta-alpha organisation (IPR008221 from INTERPRO). The N-terminal domain is a composite domain and plays a major trimer stabilising role by contacting the catalytic domain of the symmetry related alpha-subunit []. ; GO: 0009039 urease activity, 0016151 nickel ion binding, 0019627 urea metabolic process; PDB: 3LA4_A 2UBP_C 3UBP_C 1UBP_C 1S3T_C 1IE7_C 4UBP_C 1E9Y_B 1E9Z_B 3QGA_O ....
Probab=97.04 E-value=0.0021 Score=48.22 Aligned_cols=36 Identities=19% Similarity=0.415 Sum_probs=29.1
Q ss_pred cceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCCh
Q 011766 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSA 57 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~ 57 (478)
..|++|.|+.|++. .. +.+++|.|+||+|+.||+..
T Consensus 65 ~lD~VItNa~IiD~---~G-I~KADIGIkdG~I~gIGkAG 100 (121)
T PF00449_consen 65 ALDLVITNALIIDY---TG-IVKADIGIKDGRIVGIGKAG 100 (121)
T ss_dssp C-SEEEEEEEEEET---TE-EEEEEEEEETTEEEEEE-EB
T ss_pred cccEEEeCcEEEec---CC-cEEeeEEeeCCEEEEEeccC
Confidence 67999999999964 23 56789999999999999864
No 141
>PLN03055 AMP deaminase; Provisional
Probab=96.67 E-value=0.024 Score=56.74 Aligned_cols=96 Identities=18% Similarity=0.103 Sum_probs=71.8
Q ss_pred eeeeeccC--ChhHHHHHHhcCCeEEECccchhhc---cCCCcHHHHHHCCCcEEEcCCCCCCCCC--cCHHHHHHHHHH
Q 011766 290 LSAHTVWV--NHTEIGLLSRAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLASL 362 (478)
Q Consensus 290 ~i~h~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~~~~~~~~~gv~v~~gsD~~~~~~~--~~~~~~~~~~~~ 362 (478)
.|.||..+ ++..+.++...++.+.+||.+|... -...|++.+++.|++|+++||.+..... ..+.++...+..
T Consensus 441 RIgHGi~l~~dP~L~yl~~~~qI~LevCPlSN~~l~~~y~~HP~~~~~~~Gl~VSInTDDPl~f~tT~epL~eEY~~aa~ 520 (602)
T PLN03055 441 NIAHGNNLRKSPGLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFARGLNVSLSTDDPLQIHLTKEPLVEEYSIAAQ 520 (602)
T ss_pred eecCccccCCCHHHHHHHHHcCCeEEEccCcchhhccchhhChHHHHHHCCCEEEEcCCCcchhcCCCCcHHHHHHHHHH
Confidence 46898876 4677888899999999999999754 2346899999999999999999755322 235666655543
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 011766 363 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 400 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~ 400 (478)
.- ++|..+.. .++.|+.++.+++
T Consensus 521 ~~--------------~LS~~DL~-eLarNSV~~Sf~~ 543 (602)
T PLN03055 521 VW--------------KLSSCDLC-EIARNSVLQSGFP 543 (602)
T ss_pred Hh--------------CCCHHHHH-HHHHHHHHHhcCC
Confidence 31 48888775 4567888888775
No 142
>TIGR01429 AMP_deaminase AMP deaminase. This model describes AMP deaminase, a large, well-conserved eukaryotic protein involved in energy metabolism. Most members of the family have an additional, poorly alignable region of 150 amino acids or more N-terminal to the region included in the model.
Probab=96.62 E-value=0.045 Score=55.06 Aligned_cols=133 Identities=17% Similarity=0.198 Sum_probs=86.4
Q ss_pred HHHHHHHHHHcCCc---eeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCC--hhHHHHHHhcCCe
Q 011766 237 LLETRDMAREFKTG---IHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVK 311 (478)
Q Consensus 237 l~~~~~~a~~~~~~---v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~--~~~~~~~~~~~~~ 311 (478)
+..+=.+-++.|+. +..|+.+..... ....++ +.. ..|.||..+. +....++...++.
T Consensus 424 l~~LN~~R~~rGLnt~~LrpHaGEag~~e--------------~l~~A~--L~a-dRIgHGi~l~~dp~L~yl~~~~qI~ 486 (611)
T TIGR01429 424 IMVLNNFRRERGLNTFLLRPHCGEAGSVD--------------HLVSAF--LTS-HGINHGILLRKVPVLQYLYYLTQIP 486 (611)
T ss_pred HHHHHHHHHHcCCCccceeecCCCCCCHH--------------HHHHHh--hcC-cccccceecCCCHHHHHHHHHcCCe
Confidence 33333444555655 789998754321 111111 221 2378999873 4555666789999
Q ss_pred EEECccchhhc---cCCCcHHHHHHCCCcEEEcCCCCCCCCC--cCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 011766 312 VSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 386 (478)
Q Consensus 312 ~~~~p~~~~~~---~~~~~~~~~~~~gv~v~~gsD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al 386 (478)
+.+||.+|... -...|++.++++|++|+++||.+..... ..+.++...+... .+++..+..
T Consensus 487 LevCPtSN~~l~~~y~~HP~~~~~~~Gl~VSLsTDDPl~f~~T~epL~EEY~~aa~~--------------~~Ls~~Dl~ 552 (611)
T TIGR01429 487 IAMSPLSNNSLFLEYSKNPLPEYLHKGLNVSLSTDDPLQFHYTKEALMEEYAIAAQV--------------WKLSTCDMC 552 (611)
T ss_pred EEEcCCcchhhccChhhChHHHHHHCCCeEEEcCCCchhhCCCCCcHHHHHHHHHHH--------------hCCCHHHHH
Confidence 99999999744 2346899999999999999998754221 2355665555432 148888766
Q ss_pred HHHhHHHHHHcCCCC
Q 011766 387 RMATINGAKSVLWDN 401 (478)
Q Consensus 387 ~~~T~~pA~~lgl~~ 401 (478)
+ ++.|+.+..+.++
T Consensus 553 e-LarNSV~~S~~~~ 566 (611)
T TIGR01429 553 E-LARNSVLQSGFEH 566 (611)
T ss_pred H-HHHHHHHHhCCCH
Confidence 5 4668888887753
No 143
>cd01319 AMPD AMP deaminase (AMPD) catalyzes the hydrolytic deamination of adensosine monophosphate (AMP) at position 6 of the adenine nucleotide ring. AMPD is a diverse and highly regulated eukaryotic key enzyme of the adenylate catabolic pathway.
Probab=96.58 E-value=0.03 Score=55.23 Aligned_cols=133 Identities=14% Similarity=0.110 Sum_probs=85.6
Q ss_pred HHHHHHHHHHcC---CceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCC--hhHHHHHHhcCCe
Q 011766 237 LLETRDMAREFK---TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVK 311 (478)
Q Consensus 237 l~~~~~~a~~~~---~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~--~~~~~~~~~~~~~ 311 (478)
+..+=.+-++.| +.+..|+.+...... ...+. +.. ..|+||..+. +.....+...++.
T Consensus 312 i~~LN~~R~~rglntf~~r~HaGE~g~~~~--------------l~~al--L~a-dRIGHGv~l~~dp~L~~l~~~~qI~ 374 (496)
T cd01319 312 ITTLNSFRKARGFNTFVLRPHCGEAGDIDH--------------LASAF--LLA-HGISHGINLRKVPVLQYLYYLTQIG 374 (496)
T ss_pred HHHHHHHHHHcCCCCcceeeecCCCCChHH--------------HHHHh--hcC-cccccccccCCCHHHHHHHHHcCCe
Confidence 333334444555 457899987643221 11122 222 3478999874 3444556778999
Q ss_pred EEECccchhhc---cCCCcHHHHHHCCCcEEEcCCCCCCCCC--cCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 011766 312 VSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 386 (478)
Q Consensus 312 ~~~~p~~~~~~---~~~~~~~~~~~~gv~v~~gsD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al 386 (478)
+.+||.+|... -...|+..+++.|++|+++||.+..... ..+.++...+... .++|..+..
T Consensus 375 levCPlSN~~l~~~~~~HP~~~~l~~Gl~VsInTDDPl~f~~t~~~L~eEY~~a~~~--------------~~Ls~~Dl~ 440 (496)
T cd01319 375 IAMSPLSNNSLFLSYEKNPFPEFFKRGLNVSLSTDDPLQFHFTKEPLMEEYSIAAQV--------------WKLSTCDMC 440 (496)
T ss_pred EEEecCccHhhhcCcccChHHHHHHCCCeEEEeCCCchhhCCCCCcHHHHHHHHHHH--------------cCCCHHHHH
Confidence 99999999754 2356899999999999999998754321 2356666555433 148887765
Q ss_pred HHHhHHHHHHcCCCC
Q 011766 387 RMATINGAKSVLWDN 401 (478)
Q Consensus 387 ~~~T~~pA~~lgl~~ 401 (478)
.++.|+.+..++++
T Consensus 441 -eLarNSV~~Sf~~~ 454 (496)
T cd01319 441 -ELARNSVLQSGFEH 454 (496)
T ss_pred -HHHHHHHHHhCCCH
Confidence 45678888887753
No 144
>cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM). This reaction is part of the protocatechuate (PCA) 4,5-cleavage pathway. PCA is one of the most important intermediate metabolites in the bacterial pathways for various phenolic compounds, including lignin, which is the most abundant aromatic material in nature.
Probab=96.46 E-value=0.42 Score=43.77 Aligned_cols=100 Identities=16% Similarity=0.137 Sum_probs=55.9
Q ss_pred CHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCC----------hhHH
Q 011766 233 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN----------HTEI 302 (478)
Q Consensus 233 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~----------~~~~ 302 (478)
+.+.+....+.+.++|+++.+|+...... . ....+... ..+.++.|..... .+.+
T Consensus 108 ~~~~~~~~~~~~~~~gl~v~~~~~~~~l~-~-----------l~~l~~~~---~l~ivldH~G~p~~~~~~~~~~~~~~l 172 (263)
T cd01311 108 NKDELDEIAKRAAELGWHVQVYFDAVDLP-A-----------LLPFLQKL---PVAVVIDHFGRPDVTKGVDGAEFAALL 172 (263)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEeCHhhHH-H-----------HHHHHHHC---CCCEEEECCCCCCCCCCCCCHhHHHHH
Confidence 66678888999999999999998642221 0 22333333 4678889977543 1223
Q ss_pred HHHHhcCCeEEECccchhhcc-----CC-CcHHHHHHCC-CcEEEcCCCCCC
Q 011766 303 GLLSRAGVKVSHCPASAMRML-----GF-APIKEMLHAD-ICVSLGTDGAPS 347 (478)
Q Consensus 303 ~~~~~~~~~~~~~p~~~~~~~-----~~-~~~~~~~~~g-v~v~~gsD~~~~ 347 (478)
+.++.-++.+.++-....... .. +-++.+++.| -++.+|||.+..
T Consensus 173 ~~l~~pNV~~k~Sg~~~~~~~~~~~~~~~~~~~~~~~~g~dRlmfGSD~P~~ 224 (263)
T cd01311 173 KLIEEGNVWVKVSGPYRLSVKQEAYADVIAFARQIVAAAPDRLVWGTDWPHP 224 (263)
T ss_pred HHHhcCCEEEEecchhhcCCCCCCHHHHHHHHHHHHHhCCCcEEEeCCCCCC
Confidence 333223555554432111000 01 1223344556 579999999764
No 145
>PLN02768 AMP deaminase
Probab=96.03 E-value=0.065 Score=55.13 Aligned_cols=96 Identities=18% Similarity=0.143 Sum_probs=70.4
Q ss_pred eeeeeccC--ChhHHHHHHhcCCeEEECccchhhc---cCCCcHHHHHHCCCcEEEcCCCCCCCCC--cCHHHHHHHHHH
Q 011766 290 LSAHTVWV--NHTEIGLLSRAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLASL 362 (478)
Q Consensus 290 ~i~h~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~~~~~~~~~gv~v~~gsD~~~~~~~--~~~~~~~~~~~~ 362 (478)
.|.||..+ ++....++...++.+.+||.+|... -...|++.+++.|++|+++||.+...+. ..+.++...+..
T Consensus 674 RIgHGv~l~kdP~LqyL~~l~qIgLevCPlSN~~l~~~y~~HPf~~f~~~GL~VSLNTDDPL~fhtT~epL~EEYsvAak 753 (835)
T PLN02768 674 NIAHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAAS 753 (835)
T ss_pred ccCCccccCcCHHHHHHHHHcCCeEEECCCcchhhhcchhhChHHHHHHCCCEEEEcCCCccccCCCCCCHHHHHHHHHH
Confidence 36888887 3556667788899999999999754 2356999999999999999999765322 136666665553
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 011766 363 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 400 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~ 400 (478)
.. +++..+..++ +.|+..+.+++
T Consensus 754 ~~--------------~LS~~DL~EL-arNSV~aSff~ 776 (835)
T PLN02768 754 VW--------------KLSSCDLCEI-ARNSVYQSGFS 776 (835)
T ss_pred Hh--------------CcCHHHHHHH-HHHHHHHhcCC
Confidence 32 4888877654 66888888775
No 146
>PTZ00310 AMP deaminase; Provisional
Probab=95.69 E-value=0.14 Score=56.11 Aligned_cols=95 Identities=18% Similarity=0.191 Sum_probs=71.5
Q ss_pred eeeeeccC--ChhHHHHHHhcCCeEEECccchhhc---cCCCcHHHHHHCCCcEEEcCCCCCCCCCcC---HHHHHHHHH
Q 011766 290 LSAHTVWV--NHTEIGLLSRAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMS---IVDEMYLAS 361 (478)
Q Consensus 290 ~i~h~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~---~~~~~~~~~ 361 (478)
.|.||..+ ++..+.++...++.+.+||.+|... -...|+..+++.|++|+++||.+... +.. +.++...+.
T Consensus 1134 RIgHGi~l~~dp~L~yl~~l~qI~LevCPlSN~~l~~sy~~hP~~~f~~~Gl~VSLnTDDPl~f-~tT~EpL~eEYsiaa 1212 (1453)
T PTZ00310 1134 SICHGINLRNDPPMQYLYYLAQIGLHVSPLSNNALFLAFLENPFPVFFHRGLNVSLSTDDPLMF-HQTQEPLIEEYSIAA 1212 (1453)
T ss_pred cccchhhhCcCHHHHHHHHHcCCeEEECCCchHhhhhchhhCcHHHHHHCCCEEEECCCCcccc-CCCcccHHHHHHHHH
Confidence 47899987 4566678888999999999999654 23569999999999999999997553 223 566665554
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 011766 362 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 400 (478)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~ 400 (478)
... ++|..+..++ ..|+..+-|.+
T Consensus 1213 ~~~--------------~LS~~Dl~el-arNSV~~SGf~ 1236 (1453)
T PTZ00310 1213 RVW--------------GLSLNDLCEI-ARNSVLQSGFD 1236 (1453)
T ss_pred HHh--------------CCCHHHHHHH-HHHHHHHcCCC
Confidence 331 5888877754 66888888875
No 147
>PRK06361 hypothetical protein; Provisional
Probab=94.94 E-value=0.11 Score=45.98 Aligned_cols=96 Identities=14% Similarity=0.054 Sum_probs=64.1
Q ss_pred eeeeeeccCChhHHHHHHhcCCeEEECccchhhccCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccc
Q 011766 289 LLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGRE 368 (478)
Q Consensus 289 ~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (478)
.+++|...+..+.++.+++.++.+.++............++...+.|++++++||.... .+.. .+..+....
T Consensus 115 dvlaHpd~~~~~~~~~~~~~~~~lEin~~~~~~~~~~~~l~~a~~~gi~vv~~SDaH~~---~d~~-~~~~~~~i~---- 186 (212)
T PRK06361 115 DILAHPGLITEEEAELAAENGVFLEITARKGHSLTNGHVARIAREAGAPLVINTDTHAP---SDLI-TYEFARKVA---- 186 (212)
T ss_pred cEecCcchhhHHHHHHHHHcCeEEEEECCCCcccchHHHHHHHHHhCCcEEEECCCCCH---HHHH-HHHHHHHHH----
Confidence 46788887778888999999998887652211111123345556789999999997522 2222 222222221
Q ss_pred cccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 011766 369 VFANGTTDPAALPAETVLRMATINGAKSVLW 399 (478)
Q Consensus 369 ~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl 399 (478)
...+++.++++.+.+.||+.++++
T Consensus 187 -------~~~gl~~~~v~~~~~~~~~~~~~~ 210 (212)
T PRK06361 187 -------LGAGLTEKELEEALENNPKLLLKR 210 (212)
T ss_pred -------cCCCCCHHHHHHHHHHhHHHHHHh
Confidence 234799999999999999999865
No 148
>PTZ00310 AMP deaminase; Provisional
Probab=93.73 E-value=0.33 Score=53.43 Aligned_cols=95 Identities=14% Similarity=0.130 Sum_probs=64.4
Q ss_pred eeeeeccCC-hhHHHHH-HhcCCeEEECccchhhcc----CCCcHHHHHHCCCcEEEcCCCCCCCCCc--CHHHHHHHHH
Q 011766 290 LSAHTVWVN-HTEIGLL-SRAGVKVSHCPASAMRML----GFAPIKEMLHADICVSLGTDGAPSNNRM--SIVDEMYLAS 361 (478)
Q Consensus 290 ~i~h~~~~~-~~~~~~~-~~~~~~~~~~p~~~~~~~----~~~~~~~~~~~gv~v~~gsD~~~~~~~~--~~~~~~~~~~ 361 (478)
.|.||..+. +..+..+ ...++.+.+||.+|.... ...|++.++++|++|++.||.+...+.. .+.++...+.
T Consensus 504 RI~HGi~l~d~p~LqyL~~e~qI~LeVCPlSN~~l~v~sy~~HPi~~fl~~GL~VSLNTDDPl~F~tt~EpL~EEY~iaa 583 (1453)
T PTZ00310 504 VITRATSIADYPVLQYLCGLHRVGLTVSPLRDHALSITAYFDHPLPKFLHRCLRVSISTSDPLYFHHHSQPLIEEYATAM 583 (1453)
T ss_pred cccchhccCchHHHHHHHHHcCCeEEECCCcccccCCCchhhCcHHHHHHCCCEEEECCCCccccCCCCccHHHHHHHHH
Confidence 467887764 3344444 488999999999997652 3468999999999999999997653321 3556665554
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 011766 362 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLW 399 (478)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl 399 (478)
... +++..+..++ +.|+....++
T Consensus 584 q~~--------------gLS~~DL~eL-arNSV~aSf~ 606 (1453)
T PTZ00310 584 KLF--------------SLSPLDTTEL-ARNSVLNSSF 606 (1453)
T ss_pred HHh--------------CcCHHHHHHH-HHHHHHHhCC
Confidence 321 4777666543 4566665554
No 149
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=93.37 E-value=5.5 Score=37.05 Aligned_cols=142 Identities=15% Similarity=0.115 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchH---HHHhhhCCCCCCeeeeeec--cC-ChhHHHHHHh
Q 011766 234 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV---TFLDKIEFLQNNLLSAHTV--WV-NHTEIGLLSR 307 (478)
Q Consensus 234 ~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~i~h~~--~~-~~~~~~~~~~ 307 (478)
+..+..+.+.|.++|+++.+|............. ...+. .++.... .-+.++.|+. .. ..+.+..+..
T Consensus 143 ~~~~~pi~~~a~~~gvpv~ihtG~~~~~~~~~~~----~~~p~~~~~va~~fP--~l~IVl~H~G~~~p~~~~a~~~a~~ 216 (293)
T COG2159 143 DPRLYPIYEAAEELGVPVVIHTGAGPGGAGLEKG----HSDPLYLDDVARKFP--ELKIVLGHMGEDYPWELEAIELAYA 216 (293)
T ss_pred ChHHHHHHHHHHHcCCCEEEEeCCCCCCcccccC----CCCchHHHHHHHHCC--CCcEEEEecCCCCchhHHHHHHHHh
Confidence 3347788999999999999999765432211100 00111 2233222 3457899986 32 2333333333
Q ss_pred -cCCeEEECccchhhccCCCcHHHHHHCC-CcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHH
Q 011766 308 -AGVKVSHCPASAMRMLGFAPIKEMLHAD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETV 385 (478)
Q Consensus 308 -~~~~~~~~p~~~~~~~~~~~~~~~~~~g-v~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~a 385 (478)
.++.+...-..-... ...-++.+.+.+ -++.+|||.+.. .+. ....... ..+++.+.-
T Consensus 217 ~~nvy~d~s~~~~~~~-~~~~~~~~~~~~~dkilFGSD~P~~----~~~--~~l~~~~-------------~l~l~~e~k 276 (293)
T COG2159 217 HPNVYLDTSGVRPKYF-APPLLEFLKELGPDKILFGSDYPAI----HPE--VWLAELD-------------ELGLSEEVK 276 (293)
T ss_pred CCCceeeeeccccccC-ChHHHHHHHhcccCeEEecCCCCCc----CHH--HHHHHHH-------------hcCCCHHHH
Confidence 244444332211100 002345555533 589999997543 222 2222221 124777777
Q ss_pred HHHHhHHHHHHcCCCC
Q 011766 386 LRMATINGAKSVLWDN 401 (478)
Q Consensus 386 l~~~T~~pA~~lgl~~ 401 (478)
-+..-.|+++++++..
T Consensus 277 ~kiL~~NA~rll~l~~ 292 (293)
T COG2159 277 EKILGENAARLLGLDP 292 (293)
T ss_pred HHHHHHhHHHHhCcCC
Confidence 7888899999999853
No 150
>PRK00912 ribonuclease P protein component 3; Provisional
Probab=92.01 E-value=1.3 Score=39.75 Aligned_cols=98 Identities=12% Similarity=0.072 Sum_probs=59.6
Q ss_pred ChhHHHHHHhcCCeEEECccchhhcc------CC----CcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhccc
Q 011766 298 NHTEIGLLSRAGVKVSHCPASAMRML------GF----APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGR 367 (478)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~p~~~~~~~------~~----~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~ 367 (478)
.+..++.+++.|+.+.+......+.. .. ..++...+.|++++++||......-.++...+..+.
T Consensus 120 ~~~~~~~a~~~gv~lEIn~s~~~~~~~~~r~~~~~~~~~~~~~~~~~g~piiisSdAh~~~~l~~~~~~~~l~~------ 193 (237)
T PRK00912 120 NHVLAKEAARNNVAIEFNLRDILKSRGGRRARTLSNFRDNLALARKYDFPLVLTSGAMSCYDLRSPREMIALAE------ 193 (237)
T ss_pred CHHHHHHHHHCCeEEEEEchHhhhhcccHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCcccccCCHHHHHHHHH------
Confidence 45667888888988876654322211 01 233455667999999999754321122333222222
Q ss_pred ccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC-CCccccccCc
Q 011766 368 EVFANGTTDPAALPAETVLRMATINGAKSVLWD-NDIGSLEAGK 410 (478)
Q Consensus 368 ~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~-~~~G~l~~G~ 410 (478)
..|++.++++.+.+.+|.+++... .+.+.|..|.
T Consensus 194 ---------~~Gl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 228 (237)
T PRK00912 194 ---------LFGMEEDEALKALSYYPESIIKKNRNRKNYVIEGV 228 (237)
T ss_pred ---------HcCCCHHHHHHHHHHhHHHHHHhhccCCCcccccE
Confidence 126999999999999999998753 2334444443
No 151
>PF12890 DHOase: Dihydro-orotase-like; InterPro: IPR024403 This entry represents a small family of dihydro-orotase-like proteins from bacteria.
Probab=91.51 E-value=0.06 Score=42.10 Aligned_cols=16 Identities=44% Similarity=0.982 Sum_probs=14.7
Q ss_pred CCEEeecccccccccc
Q 011766 75 SQILLPGFVNTHVHTS 90 (478)
Q Consensus 75 G~~v~PGfID~H~H~~ 90 (478)
|++++|||||.|+|+.
T Consensus 1 ~kli~~g~vd~hVhlr 16 (142)
T PF12890_consen 1 GKLILPGLVDVHVHLR 16 (142)
T ss_pred Cceeehhhhhhhhhhh
Confidence 6899999999999983
No 152
>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []. The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....
Probab=88.81 E-value=2.1 Score=39.08 Aligned_cols=167 Identities=12% Similarity=0.057 Sum_probs=79.0
Q ss_pred CCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeee
Q 011766 214 HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAH 293 (478)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h 293 (478)
..+-..+++..........++.....+.+.|.++|+++.+|+............... ......+... .+-+.++.|
T Consensus 96 ~~g~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~H~g~~~~~~~~~~~~~~--~~~~~~~~~~--P~l~ii~~H 171 (273)
T PF04909_consen 96 ELGFRGVKLHPDLGGFDPDDPRLDDPIFEAAEELGLPVLIHTGMTGFPDAPSDPADP--EELEELLERF--PDLRIILAH 171 (273)
T ss_dssp TTTESEEEEESSETTCCTTSGHCHHHHHHHHHHHT-EEEEEESHTHHHHHHHHHHHH--HHHTTHHHHS--TTSEEEESG
T ss_pred ccceeeeEecCCCCccccccHHHHHHHHHHHHhhccceeeeccccchhhhhHHHHHH--HHHHHHHHHh--cCCeEEEec
Confidence 444444554433333333344444588999999999999996511111100000000 0011122222 234678889
Q ss_pred eccC--Ch-hHHHHHHhc-CCeEEECccc-----hhhccCCCcHHHHHH-CC-CcEEEcCCCCCCCCCcCHHHHHHHHHH
Q 011766 294 TVWV--NH-TEIGLLSRA-GVKVSHCPAS-----AMRMLGFAPIKEMLH-AD-ICVSLGTDGAPSNNRMSIVDEMYLASL 362 (478)
Q Consensus 294 ~~~~--~~-~~~~~~~~~-~~~~~~~p~~-----~~~~~~~~~~~~~~~-~g-v~v~~gsD~~~~~~~~~~~~~~~~~~~ 362 (478)
+... .. +.+.++.+. ++.+...-.. .........+..+++ .| -++.+|||.+.... ............
T Consensus 172 ~G~~~~~~~~~~~l~~~~~nvy~d~s~~~~~~~~~~~~~~~~~l~~~~~~~g~drilfGSD~P~~~~-~~~~~~~~~~~~ 250 (273)
T PF04909_consen 172 LGGPFPWWEEALRLLDRFPNVYVDLSGIPPFWYFWPPSFDRPFLRRAVDEFGPDRILFGSDYPHPDG-ASPYEYIWEAYF 250 (273)
T ss_dssp GGTTHHHHHHHHHHHHHHTTEEEECHSHHSSEEEETTHHCHHHHHHHHHHHTGGGEEEE--TTSSTH-HHHHHHHHHHHH
T ss_pred CcccchhHHHHHHHHHhCCcccccccccccccccCcccccHHHHHHHHHHhCCceEEecCCCCCCCc-cccHHHHHHhhh
Confidence 8886 22 334444443 4554433210 000011233444443 34 48999999865421 111111111111
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 011766 363 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLW 399 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl 399 (478)
.. .+|.++.=+....|++++++|
T Consensus 251 ~~--------------~l~~~~~~~i~~~NA~rl~~l 273 (273)
T PF04909_consen 251 LD--------------DLSEEEREKILYDNARRLYGL 273 (273)
T ss_dssp HH--------------HSSHHHHHHHHTHHHHHHHTC
T ss_pred cc--------------CCCHHHHHHHHhHhHHHHcCc
Confidence 10 158888888999999999875
No 153
>COG0418 PyrC Dihydroorotase [Nucleotide transport and metabolism]
Probab=83.02 E-value=3.7 Score=37.40 Aligned_cols=107 Identities=14% Similarity=0.223 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHH-HHhhh--CCCCCCeeeeeeccCChhHHHHHHhcC--
Q 011766 235 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVT-FLDKI--EFLQNNLLSAHTVWVNHTEIGLLSRAG-- 309 (478)
Q Consensus 235 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~-~l~~~--~~~~~~~~i~h~~~~~~~~~~~~~~~~-- 309 (478)
+.+...++...+.|+++.+|........+.... ....++ .++.. ....-+.+++|++. .+.++.+++.+
T Consensus 118 ~~~~pvle~Mq~~gmpLlvHGEvt~~~vDifdr----E~~Fi~~vl~pl~~~fP~LKIV~EHiTT--~dav~~v~~~~~n 191 (344)
T COG0418 118 EKIYPVLEAMQKIGMPLLVHGEVTDAEVDIFDR----EAAFIESVLEPLRQRFPKLKIVLEHITT--KDAVEYVKDANNN 191 (344)
T ss_pred HHHHHHHHHHHHcCCeEEEecccCCccccchhh----HHHHHHHHHHHHHhhCCcceEEEEEecc--HHHHHHHHhcCcc
Confidence 455666788889999999998655443321110 001222 33322 22334578899885 55566666665
Q ss_pred CeEEECccchhh-----c-cCC----------------CcHHHHHHCC-CcEEEcCCCCCC
Q 011766 310 VKVSHCPASAMR-----M-LGF----------------APIKEMLHAD-ICVSLGTDGAPS 347 (478)
Q Consensus 310 ~~~~~~p~~~~~-----~-~~~----------------~~~~~~~~~g-v~v~~gsD~~~~ 347 (478)
+...++|.+.+. . +++ ..++++.-.| .++.+|||+.|+
T Consensus 192 laATIT~hHL~~nrnd~l~Ggi~Ph~fClPilKr~~hr~AL~~aa~sg~~kfFlGtDSAPH 252 (344)
T COG0418 192 LAATITPHHLLLNRNDMLVGGIRPHLFCLPILKRETHREALREAATSGHPKFFLGTDSAPH 252 (344)
T ss_pred eeeEeehhheeeehhhhhcCCCCcceeeeccccchhhHHHHHHHHhcCCCcEEecCCCCCC
Confidence 566677764321 1 222 1233444445 789999999876
No 154
>COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=82.42 E-value=39 Score=30.82 Aligned_cols=136 Identities=10% Similarity=0.020 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCC-CCCCeeeeeeccCC---------hhHHHH
Q 011766 235 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEF-LQNNLLSAHTVWVN---------HTEIGL 304 (478)
Q Consensus 235 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~i~h~~~~~---------~~~~~~ 304 (478)
+.+++.++..+..|+.+..+....+-. ..+..... ...++++.|+.... .+.+.+
T Consensus 124 ~~~r~~~~rL~~~gl~fdl~~~~~ql~---------------~~i~l~~~~Pd~~~VldH~G~p~~~~~~~~~w~~~m~~ 188 (279)
T COG3618 124 PAWRANVERLAKLGLHFDLQVDPHQLP---------------DLIPLALKAPDVNFVLDHCGRPDIKINLEDPWKAALAR 188 (279)
T ss_pred HHHHHHHHHHHhcCCeEEEEeChhhhH---------------HHHHHHhhCCCCCEEeccCCCCCccccccCHHHHHHHH
Confidence 567888888888999988877653321 11222222 22567888887752 123344
Q ss_pred HHhc-CCeEEECccchhhcc--CCCcH----HHHH-HCC-CcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCC
Q 011766 305 LSRA-GVKVSHCPASAMRML--GFAPI----KEML-HAD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTT 375 (478)
Q Consensus 305 ~~~~-~~~~~~~p~~~~~~~--~~~~~----~~~~-~~g-v~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (478)
+++. ++.+...-....... ....+ ..++ ..| -++.+|||++...-..++ ..+..+. .. +.
T Consensus 189 la~~pNv~~KlSG~~~~~~~~w~~~~v~p~~e~~i~~fg~dR~vfGSdwPv~~l~~~~-~~~~~~~-~~---------~v 257 (279)
T COG3618 189 LARRPNVWAKLSGVYAYSDESWTVEDVRPYVEELIELFGWDRFVFGSDWPVTSLESDF-ASWVAAT-RE---------LV 257 (279)
T ss_pred HHhCCCeEEEEeeecccccCCCCHHHHHHHHHHHHHhcCccceEecCCCCcccccCCh-HHHHHHH-HH---------Hc
Confidence 4443 443333221111111 11122 2333 235 689999999765322222 2221111 11 00
Q ss_pred CCCCCCHHHHHHHHhHHHHHHcCC
Q 011766 376 DPAALPAETVLRMATINGAKSVLW 399 (478)
Q Consensus 376 ~~~~ls~~~al~~~T~~pA~~lgl 399 (478)
.+ +..+=-+....||++++++
T Consensus 258 --~~-~~~er~~i~~~NA~rly~~ 278 (279)
T COG3618 258 --PG-DAAERARILVDNARRLYRL 278 (279)
T ss_pred --CC-CHHHHHHHHhhCHHHHhCC
Confidence 12 5777778889999998865
No 155
>COG1603 RPP1 RNase P/RNase MRP subunit p30 [Translation, ribosomal structure and biogenesis]
Probab=78.90 E-value=38 Score=29.87 Aligned_cols=87 Identities=13% Similarity=0.162 Sum_probs=56.5
Q ss_pred CChhHHHHHHhcCCeEEECccchhhccCC----------CcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcc
Q 011766 297 VNHTEIGLLSRAGVKVSHCPASAMRMLGF----------APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKG 366 (478)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~----------~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~ 366 (478)
++...+..+++.++.+.+.-....+..+. ..++.....++++.++||.... ...+.++....+...
T Consensus 114 ldh~~a~laa~~~valeisl~~ll~~~g~~Ra~~l~~lr~~lrl~rk~~v~ivvtS~A~s~---~elrsP~dv~sl~~~- 189 (229)
T COG1603 114 LDHVLARLAAEKGVALEISLRPLLRSSGYRRARLLSFLRSLLRLARKYDVPIVVTSDAESP---LELRSPRDVISLAKV- 189 (229)
T ss_pred ccHHHHHHHHhcCceEEEehHHhhccchhHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCh---hhhcChhhHHHHHHH-
Confidence 34567788888988887665543332221 2333444569999999997432 334444443333221
Q ss_pred cccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 011766 367 REVFANGTTDPAALPAETVLRMATINGAKSVL 398 (478)
Q Consensus 367 ~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lg 398 (478)
.|++..||-.+.+..|.++|.
T Consensus 190 -----------lG~e~~ea~~~~~~~p~~iL~ 210 (229)
T COG1603 190 -----------LGLEDDEAKKSLSEYPRLILR 210 (229)
T ss_pred -----------hCCCHHHHHHHHHHhHHHHHH
Confidence 269999999999999999997
No 156
>COG4464 CapC Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=78.14 E-value=46 Score=28.98 Aligned_cols=17 Identities=12% Similarity=0.343 Sum_probs=14.3
Q ss_pred HHHHHCCCcEEEcCCCC
Q 011766 329 KEMLHADICVSLGTDGA 345 (478)
Q Consensus 329 ~~~~~~gv~v~~gsD~~ 345 (478)
.+++++++.-.++||..
T Consensus 180 ~~~iE~~L~hFiASDAH 196 (254)
T COG4464 180 LQLIEANLVHFIASDAH 196 (254)
T ss_pred HHHHHcccceeeecccc
Confidence 46889999999999964
No 157
>COG1831 Predicted metal-dependent hydrolase (urease superfamily) [General function prediction only]
Probab=74.44 E-value=66 Score=29.07 Aligned_cols=137 Identities=12% Similarity=0.101 Sum_probs=81.2
Q ss_pred CCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCe
Q 011766 232 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK 311 (478)
Q Consensus 232 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~ 311 (478)
.+.+.+..++++|++.+|++..|........-.. ..+.....+.-..+++.-|+... ...+...|+.
T Consensus 142 ~~n~vl~~a~elA~dvdc~vqLHtes~~~~~~~~---------i~~~ak~~G~~~~~VVkHha~p~----v~~~~~~Gi~ 208 (285)
T COG1831 142 ASNEVLEYAMELAKDVDCAVQLHTESLDEETYEE---------IAEMAKEAGIKPYRVVKHHAPPL----VLKCEEVGIF 208 (285)
T ss_pred HHHHHHHHHHHHhhcCCCcEEEecCCCChHHHHH---------HHHHHHHhCCCcceeEeecCCcc----chhhhhcCcC
Confidence 3455688889999999999999997654321110 23456666664555554444432 2223334443
Q ss_pred EEECccchhhccCCCcHHHHHHCCCcEEEcCCCCCC----CCCcCHHHHH-HHHHHHhcccccccCCCCCCCCCCHHHHH
Q 011766 312 VSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAPS----NNRMSIVDEM-YLASLINKGREVFANGTTDPAALPAETVL 386 (478)
Q Consensus 312 ~~~~p~~~~~~~~~~~~~~~~~~gv~v~~gsD~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ls~~~al 386 (478)
-++- .+..+++..++.|-.+.+=||..-. +.-+.++.-= +...+.+. ..++.+.+.
T Consensus 209 pSV~-------asr~~v~~a~~~g~~FmmETDyIDDp~RpgavL~PktVPrr~~~i~~~------------g~~~ee~vy 269 (285)
T COG1831 209 PSVP-------ASRKNVEDAAELGPRFMMETDYIDDPRRPGAVLGPKTVPRRTREILEK------------GDLTEEDVY 269 (285)
T ss_pred Cccc-------ccHHHHHHHHhcCCceEeecccccCcccCCCcCCccchhHHHHHHHHh------------cCCcHHHHH
Confidence 2221 1223678889999999999996411 1112333211 12222222 236788888
Q ss_pred HHHhHHHHHHcCCC
Q 011766 387 RMATINGAKSVLWD 400 (478)
Q Consensus 387 ~~~T~~pA~~lgl~ 400 (478)
+..-.||.+.+|++
T Consensus 270 ~i~~E~pe~VYg~~ 283 (285)
T COG1831 270 RIHVENPERVYGIE 283 (285)
T ss_pred HHHHhCHHHHhCcc
Confidence 89999999999874
No 158
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=66.90 E-value=68 Score=27.96 Aligned_cols=90 Identities=11% Similarity=-0.023 Sum_probs=58.9
Q ss_pred CCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCe
Q 011766 232 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK 311 (478)
Q Consensus 232 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~ 311 (478)
.+.+...++.+...+.|+++.--....... .+.+.......++..++-++-++.++.+.+.+.|..
T Consensus 17 ~~~e~a~~~~~al~~~Gi~~iEit~~t~~a--------------~~~i~~l~~~~~~~~vGAGTVl~~~~a~~a~~aGA~ 82 (204)
T TIGR01182 17 DDVDDALPLAKALIEGGLRVLEVTLRTPVA--------------LDAIRLLRKEVPDALIGAGTVLNPEQLRQAVDAGAQ 82 (204)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCccH--------------HHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHcCCC
Confidence 467788888888899998854333322221 122222211123577889999999999999999999
Q ss_pred EEECccchhhccCCCcHHHHHHCCCcEEE
Q 011766 312 VSHCPASAMRMLGFAPIKEMLHADICVSL 340 (478)
Q Consensus 312 ~~~~p~~~~~~~~~~~~~~~~~~gv~v~~ 340 (478)
+.++|..+. .-++...+.|++..-
T Consensus 83 FivsP~~~~-----~v~~~~~~~~i~~iP 106 (204)
T TIGR01182 83 FIVSPGLTP-----ELAKHAQDHGIPIIP 106 (204)
T ss_pred EEECCCCCH-----HHHHHHHHcCCcEEC
Confidence 999998753 224445566665444
No 159
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=64.60 E-value=76 Score=27.58 Aligned_cols=91 Identities=7% Similarity=-0.016 Sum_probs=58.8
Q ss_pred cCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCC
Q 011766 231 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGV 310 (478)
Q Consensus 231 ~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~ 310 (478)
..+.+....+.+...+.|+++.=-....... .+.+.....-.++.+++-++-++.++.+.+.+.|.
T Consensus 12 ~~~~~~a~~ia~al~~gGi~~iEit~~tp~a--------------~~~I~~l~~~~~~~~vGAGTVl~~e~a~~ai~aGA 77 (201)
T PRK06015 12 IDDVEHAVPLARALAAGGLPAIEITLRTPAA--------------LDAIRAVAAEVEEAIVGAGTILNAKQFEDAAKAGS 77 (201)
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEeCCCccH--------------HHHHHHHHHHCCCCEEeeEeCcCHHHHHHHHHcCC
Confidence 3467788888888888998854333222221 22222221111357788999999999999999999
Q ss_pred eEEECccchhhccCCCcHHHHHHCCCcEEE
Q 011766 311 KVSHCPASAMRMLGFAPIKEMLHADICVSL 340 (478)
Q Consensus 311 ~~~~~p~~~~~~~~~~~~~~~~~~gv~v~~ 340 (478)
.+.++|..+.. -++...+.|++..-
T Consensus 78 ~FivSP~~~~~-----vi~~a~~~~i~~iP 102 (201)
T PRK06015 78 RFIVSPGTTQE-----LLAAANDSDVPLLP 102 (201)
T ss_pred CEEECCCCCHH-----HHHHHHHcCCCEeC
Confidence 99999986632 24445556655443
No 160
>COG1387 HIS2 Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only]
Probab=61.64 E-value=1.2e+02 Score=27.14 Aligned_cols=49 Identities=12% Similarity=0.092 Sum_probs=32.0
Q ss_pred hhHHHHHHhcCCeEEECccchhhccCCCcHHHHHHCCCcEEEcCCCCCC
Q 011766 299 HTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAPS 347 (478)
Q Consensus 299 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gv~v~~gsD~~~~ 347 (478)
.+.++.+.+.|..+.+.-+.........-++.+.+.|++++++||+...
T Consensus 150 ~~~~~~~~~~g~aleins~~~~~~~~~~~~~~~~e~G~~~~i~tDaH~~ 198 (237)
T COG1387 150 EELIELAEKNGKALEINSRPGRLDPNSEILRLARELGVKLAIGTDAHRP 198 (237)
T ss_pred HHHHHHHHHhCcEEeecCCcCccCchHHHHHHHHHhCCeEEeecCcCCh
Confidence 3567788888888876654222212233455667789999999997543
No 161
>COG0800 Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
Probab=59.20 E-value=75 Score=27.72 Aligned_cols=90 Identities=12% Similarity=-0.057 Sum_probs=58.4
Q ss_pred CHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeE
Q 011766 233 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKV 312 (478)
Q Consensus 233 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~ 312 (478)
+.|.-..+.+..-+.|++..=-...... +.+.+.......++.++.-++-+++++.+.+.+.|..+
T Consensus 23 ~~e~a~~~a~Ali~gGi~~IEITl~sp~--------------a~e~I~~l~~~~p~~lIGAGTVL~~~q~~~a~~aGa~f 88 (211)
T COG0800 23 DVEEALPLAKALIEGGIPAIEITLRTPA--------------ALEAIRALAKEFPEALIGAGTVLNPEQARQAIAAGAQF 88 (211)
T ss_pred CHHHHHHHHHHHHHcCCCeEEEecCCCC--------------HHHHHHHHHHhCcccEEccccccCHHHHHHHHHcCCCE
Confidence 5566666777777788875433322222 22233333333347889999999999999999999999
Q ss_pred EECccchhhccCCCcHHHHHHCCCcEEEc
Q 011766 313 SHCPASAMRMLGFAPIKEMLHADICVSLG 341 (478)
Q Consensus 313 ~~~p~~~~~~~~~~~~~~~~~~gv~v~~g 341 (478)
.++|..+.. -++...+.|++++=|
T Consensus 89 iVsP~~~~e-----v~~~a~~~~ip~~PG 112 (211)
T COG0800 89 IVSPGLNPE-----VAKAANRYGIPYIPG 112 (211)
T ss_pred EECCCCCHH-----HHHHHHhCCCcccCC
Confidence 999987632 245555566554433
No 162
>cd01301 rDP_like renal dipeptidase (rDP), best studied in mammals and also called membrane or microsomal dipeptidase, is a membrane-bound glycoprotein hydrolyzing dipeptides and is involved in hydrolytic metabolism of penem and carbapenem beta-lactam antibiotics. Although the biological function of the enzyme is still unknown, it has been suggested to play a role in the renal glutathione metabolism.
Probab=57.42 E-value=69 Score=30.08 Aligned_cols=93 Identities=16% Similarity=0.152 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHcCCceeE-eccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeee---------eccCChhHHHHH
Q 011766 236 LLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAH---------TVWVNHTEIGLL 305 (478)
Q Consensus 236 ~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h---------~~~~~~~~~~~~ 305 (478)
.-+++++...+.|+.+.+ |+.+... .+ .++. ....++.+| .-.+++++++.+
T Consensus 155 ~G~~vv~~mn~lGmiiDvSH~s~~~~-~d--------------v~~~---s~~PviaSHsn~ral~~h~RNltD~~i~~i 216 (309)
T cd01301 155 FGKELVREMNRLGIIIDLSHLSERTF-WD--------------VLDI---SNAPVIASHSNARALCDHPRNLTDAQLKAI 216 (309)
T ss_pred HHHHHHHHHHHcCCEEEcCCCCHHHH-HH--------------HHHh---cCCCEEEeccChHHhcCCCCCCCHHHHHHH
Confidence 456677788888988865 5554221 11 1111 122344444 445889999999
Q ss_pred HhcCCeEEECccchhhc-cCCCcHH-------HHHH-CCC-cEEEcCCCCC
Q 011766 306 SRAGVKVSHCPASAMRM-LGFAPIK-------EMLH-ADI-CVSLGTDGAP 346 (478)
Q Consensus 306 ~~~~~~~~~~p~~~~~~-~~~~~~~-------~~~~-~gv-~v~~gsD~~~ 346 (478)
++.|..+-++....+-. .....+. .+.+ .|+ .|++|||...
T Consensus 217 a~~GGvigi~~~~~fl~~~~~~~~~~~~~hi~~i~~l~G~dhVgiGsDfdg 267 (309)
T cd01301 217 AETGGVIGVNFYPAFLSPGADATLDDVVRHIDYIVDLIGIDHVGLGSDFDG 267 (309)
T ss_pred HHcCCEEEEeeeHHHhCCCCCCCHHHHHHHHHHHHHhcCCCeEEECcccCC
Confidence 99988766554432221 1122222 2222 354 5999999643
No 163
>PRK07945 hypothetical protein; Provisional
Probab=52.27 E-value=29 Score=33.01 Aligned_cols=48 Identities=17% Similarity=0.093 Sum_probs=31.8
Q ss_pred hhHHHHHHhcCCeEEECccchhhccCCCcHHHHHHCCCcEEEcCCCCC
Q 011766 299 HTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAP 346 (478)
Q Consensus 299 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gv~v~~gsD~~~ 346 (478)
++.++.+++.|+.+.+............-++.+.+.|+++++|||...
T Consensus 248 ~~i~~a~~e~g~~lEINt~~~r~~P~~~il~~a~e~G~~vtigSDAH~ 295 (335)
T PRK07945 248 EAVFAACREHGTAVEINSRPERRDPPTRLLRLALDAGCLFSIDTDAHA 295 (335)
T ss_pred HHHHHHHHHhCCEEEEeCCCCCCCChHHHHHHHHHcCCeEEecCCCCC
Confidence 456788888999888764322111111234667788999999999643
No 164
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=44.56 E-value=2.2e+02 Score=25.02 Aligned_cols=94 Identities=12% Similarity=-0.020 Sum_probs=59.7
Q ss_pred CCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCe
Q 011766 232 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK 311 (478)
Q Consensus 232 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~ 311 (478)
.+.+....+.+...+.|+++.=-........+ .+..+...-...++.+++=++-++.++.+.+.+.|..
T Consensus 22 ~~~~~a~~~~~al~~~Gi~~iEit~~~~~a~~-----------~i~~l~~~~~~~p~~~vGaGTV~~~~~~~~a~~aGA~ 90 (213)
T PRK06552 22 ESKEEALKISLAVIKGGIKAIEVTYTNPFASE-----------VIKELVELYKDDPEVLIGAGTVLDAVTARLAILAGAQ 90 (213)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCCccHHH-----------HHHHHHHHcCCCCCeEEeeeeCCCHHHHHHHHHcCCC
Confidence 47778888889999999886533332222111 1222222111113578899999999999999999999
Q ss_pred EEECccchhhccCCCcHHHHHHCCCcEEEc
Q 011766 312 VSHCPASAMRMLGFAPIKEMLHADICVSLG 341 (478)
Q Consensus 312 ~~~~p~~~~~~~~~~~~~~~~~~gv~v~~g 341 (478)
+.+.|..+.. -++...+.|++..-|
T Consensus 91 FivsP~~~~~-----v~~~~~~~~i~~iPG 115 (213)
T PRK06552 91 FIVSPSFNRE-----TAKICNLYQIPYLPG 115 (213)
T ss_pred EEECCCCCHH-----HHHHHHHcCCCEECC
Confidence 9999986632 234445555555544
No 165
>PF01081 Aldolase: KDPG and KHG aldolase; InterPro: IPR000887 4-Hydroxy-2-oxoglutarate aldolase (4.1.3.16 from EC) (KHG-aldolase) catalyzes the interconversion of 4-hydroxy-2-oxoglutarate into pyruvate and glyoxylate. Phospho-2-dehydro-3-deoxygluconate aldolase (4.1.2.14 from EC) (KDPG-aldolase) catalyzes the interconversion of 6-phospho-2-dehydro-3-deoxy-D-gluconate into pyruvate and glyceraldehyde 3-phosphate. These two enzymes are structurally and functionally related []. They are both homotrimeric proteins of approximately 220 amino-acid residues. They are class I aldolases whose catalytic mechanism involves the formation of a Schiff-base intermediate between the substrate and the epsilon-amino group of a lysine residue. In both enzymes, an arginine is required for catalytic activity.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VCR_A 1FQ0_A 1EUN_A 1EUA_B 1FWR_A 2C0A_B 1WBH_A 1WAU_A 2YW3_B 2YW4_A ....
Probab=43.24 E-value=86 Score=27.13 Aligned_cols=90 Identities=13% Similarity=-0.008 Sum_probs=49.5
Q ss_pred CHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeE
Q 011766 233 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKV 312 (478)
Q Consensus 233 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~ 312 (478)
+.+....+.+...+.|+++.=-........+ .++.+.. -.++.+++-++-++.++.+.+.+.|..+
T Consensus 18 ~~~~a~~~~~al~~gGi~~iEiT~~t~~a~~-----------~I~~l~~---~~p~~~vGAGTV~~~e~a~~a~~aGA~F 83 (196)
T PF01081_consen 18 DPEDAVPIAEALIEGGIRAIEITLRTPNALE-----------AIEALRK---EFPDLLVGAGTVLTAEQAEAAIAAGAQF 83 (196)
T ss_dssp SGGGHHHHHHHHHHTT--EEEEETTSTTHHH-----------HHHHHHH---HHTTSEEEEES--SHHHHHHHHHHT-SE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEecCCccHHH-----------HHHHHHH---HCCCCeeEEEeccCHHHHHHHHHcCCCE
Confidence 4556667777778888885433322222111 1221111 1145778899999999999999999999
Q ss_pred EECccchhhccCCCcHHHHHHCCCcEEEc
Q 011766 313 SHCPASAMRMLGFAPIKEMLHADICVSLG 341 (478)
Q Consensus 313 ~~~p~~~~~~~~~~~~~~~~~~gv~v~~g 341 (478)
.++|..+.. -++...+.|++..=|
T Consensus 84 ivSP~~~~~-----v~~~~~~~~i~~iPG 107 (196)
T PF01081_consen 84 IVSPGFDPE-----VIEYAREYGIPYIPG 107 (196)
T ss_dssp EEESS--HH-----HHHHHHHHTSEEEEE
T ss_pred EECCCCCHH-----HHHHHHHcCCcccCC
Confidence 999986632 234444555554443
No 166
>KOG3020 consensus TatD-related DNase [Replication, recombination and repair]
Probab=43.18 E-value=2.8e+02 Score=25.80 Aligned_cols=68 Identities=13% Similarity=0.164 Sum_probs=47.3
Q ss_pred HHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECc
Q 011766 237 LLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCP 316 (478)
Q Consensus 237 l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p 316 (478)
.++-+++|.....|+.+|.-..... ..+++......-.+-++.|+..-+.++++++.+.+..+.+++
T Consensus 137 FekQl~LA~~~~~Pl~iH~r~a~~d-------------~~eIl~~~~~~~~~~vvvHsFtGs~e~~~~~lk~~~yig~~g 203 (296)
T KOG3020|consen 137 FEKQLDLAKRLKLPLFIHCRSAHED-------------LLEILKRFLPECHKKVVVHSFTGSAEEAQKLLKLGLYIGFTG 203 (296)
T ss_pred HHHHHHHHHHccCCeeeechhhhHH-------------HHHHHHHhccccCCceEEEeccCCHHHHHHHHHccEEecccc
Confidence 5555689999999999999662221 334444443333335678999999999999999996655554
Q ss_pred c
Q 011766 317 A 317 (478)
Q Consensus 317 ~ 317 (478)
.
T Consensus 204 ~ 204 (296)
T KOG3020|consen 204 C 204 (296)
T ss_pred e
Confidence 4
No 167
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=42.62 E-value=2.5e+02 Score=25.44 Aligned_cols=120 Identities=11% Similarity=0.055 Sum_probs=72.1
Q ss_pred eccccccCC-HHHHHHHHHHHHHcCCceeEeccCChhhhHHHh--hhcCCCC---chHHHHhhhCCCCCCeeeeeeccCC
Q 011766 225 GIRQIMNAT-DRLLLETRDMAREFKTGIHMHVAEIPYENQVVM--DTRKVDH---GTVTFLDKIEFLQNNLLSAHTVWVN 298 (478)
Q Consensus 225 ~~~~~~~~~-~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~--~~~~~~~---~~~~~l~~~~~~~~~~~i~h~~~~~ 298 (478)
.+.++.... .+-++-+.+..+++|+++.+.+.+......... +..-++. +-.+++.+.+..+..+.+..+.+++
T Consensus 49 sp~sFqG~G~eeGL~iL~~vk~~~glpvvTeV~~~~~~~~vae~vDilQIgArn~rn~~LL~a~g~t~kpV~lKrG~~~t 128 (258)
T TIGR01362 49 SIHSFRGPGLEEGLKILQKVKEEFGVPILTDVHESSQCEPVAEVVDIIQIPAFLCRQTDLLVAAAKTGRIVNVKKGQFLS 128 (258)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCceEEEeCCHHHHHHHHhhCcEEEeCchhcchHHHHHHHhccCCeEEecCCCcCC
Confidence 344555566 567888888899999999988776544322111 1111111 2346777888778888889999999
Q ss_pred hhHHHHHHh----c-CCeEEECccchhhc-----cCCCcHHHHHHCCCcEEEcCCC
Q 011766 299 HTEIGLLSR----A-GVKVSHCPASAMRM-----LGFAPIKEMLHADICVSLGTDG 344 (478)
Q Consensus 299 ~~~~~~~~~----~-~~~~~~~p~~~~~~-----~~~~~~~~~~~~gv~v~~gsD~ 344 (478)
++++...++ . +-.+..|-+..... ..+..+..|.+.+.+|++---|
T Consensus 129 ~~e~l~aaeyi~~~Gn~~viLcERG~tf~y~r~~~D~~~ip~~k~~~~PVi~DpSH 184 (258)
T TIGR01362 129 PWDMKNVVEKVLSTGNKNILLCERGTSFGYNNLVVDMRSLPIMRELGCPVIFDATH 184 (258)
T ss_pred HHHHHHHHHHHHHcCCCcEEEEeCCCCcCCCCcccchhhhHHHHhcCCCEEEeCCc
Confidence 988754433 3 33466665543211 1233445555567787774443
No 168
>PRK09140 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed
Probab=42.12 E-value=2e+02 Score=25.08 Aligned_cols=92 Identities=14% Similarity=0.066 Sum_probs=59.0
Q ss_pred cCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhC-CCCCCeeeeeeccCChhHHHHHHhcC
Q 011766 231 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIE-FLQNNLLSAHTVWVNHTEIGLLSRAG 309 (478)
Q Consensus 231 ~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~i~h~~~~~~~~~~~~~~~~ 309 (478)
..+.+...++.+.+.+.|+++.=-........+ .+.... ....+..++-++.++.++++.+.+.|
T Consensus 18 ~~~~~~~~~~~~a~~~gGi~~iEvt~~~~~~~~--------------~i~~l~~~~~~~~~iGaGTV~~~~~~~~a~~aG 83 (206)
T PRK09140 18 GITPDEALAHVGALIEAGFRAIEIPLNSPDPFD--------------SIAALVKALGDRALIGAGTVLSPEQVDRLADAG 83 (206)
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEeCCCccHHH--------------HHHHHHHHcCCCcEEeEEecCCHHHHHHHHHcC
Confidence 347788888899999999885422222222111 111111 11224678888999999999999999
Q ss_pred CeEEECccchhhccCCCcHHHHHHCCCcEEEc
Q 011766 310 VKVSHCPASAMRMLGFAPIKEMLHADICVSLG 341 (478)
Q Consensus 310 ~~~~~~p~~~~~~~~~~~~~~~~~~gv~v~~g 341 (478)
..+.+.|..+.. ..+.....|+.+..|
T Consensus 84 A~fivsp~~~~~-----v~~~~~~~~~~~~~G 110 (206)
T PRK09140 84 GRLIVTPNTDPE-----VIRRAVALGMVVMPG 110 (206)
T ss_pred CCEEECCCCCHH-----HHHHHHHCCCcEEcc
Confidence 999999986632 234445566666655
No 169
>PRK08392 hypothetical protein; Provisional
Probab=40.26 E-value=79 Score=27.76 Aligned_cols=45 Identities=16% Similarity=0.206 Sum_probs=29.2
Q ss_pred hHHHHHHhcCCeEEECccchhhccCCCcHHHHHHCCCcEEEcCCCCC
Q 011766 300 TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAP 346 (478)
Q Consensus 300 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gv~v~~gsD~~~ 346 (478)
+.++.+++.|..+.+.-.. ......-++.+.+.|+++++|||+..
T Consensus 141 ~i~~~~~~~g~~lEiNt~~--~~p~~~~l~~~~~~G~~~~igSDAH~ 185 (215)
T PRK08392 141 EILDLAEAYGKAFEISSRY--RVPDLEFIRECIKRGIKLTFASDAHR 185 (215)
T ss_pred HHHHHHHHhCCEEEEeCCC--CCCCHHHHHHHHHcCCEEEEeCCCCC
Confidence 3467778888887765421 11111234667788999999999643
No 170
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=37.80 E-value=2.9e+02 Score=26.58 Aligned_cols=122 Identities=9% Similarity=0.098 Sum_probs=70.1
Q ss_pred eccccccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHH--hhhcCCCC---chHHHHhhhCCCCCCeeeeeeccCCh
Q 011766 225 GIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV--MDTRKVDH---GTVTFLDKIEFLQNNLLSAHTVWVNH 299 (478)
Q Consensus 225 ~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~--~~~~~~~~---~~~~~l~~~~~~~~~~~i~h~~~~~~ 299 (478)
.+.++.....+.++.+.+.+++.|+++.+-..+........ ....-++. .-..++...+..+..+++.-+.+.+.
T Consensus 159 sp~~f~g~~~e~l~~L~~~~~~~Gl~~~t~v~d~~~~~~l~~~vd~lkI~s~~~~n~~LL~~~a~~gkPVilk~G~~~t~ 238 (360)
T PRK12595 159 SPYDFQGLGVEGLKILKQVADEYGLAVISEIVNPADVEVALDYVDVIQIGARNMQNFELLKAAGRVNKPVLLKRGLSATI 238 (360)
T ss_pred CCccccCCCHHHHHHHHHHHHHcCCCEEEeeCCHHHHHHHHHhCCeEEECcccccCHHHHHHHHccCCcEEEeCCCCCCH
Confidence 33445667788999999999999999887666544332221 11111111 12356777777777788888877777
Q ss_pred hHHHHH----HhcCC-eEEECccc--hhh-----ccCCCcHHHHHH-CCCcEEEcCCCCC
Q 011766 300 TEIGLL----SRAGV-KVSHCPAS--AMR-----MLGFAPIKEMLH-ADICVSLGTDGAP 346 (478)
Q Consensus 300 ~~~~~~----~~~~~-~~~~~p~~--~~~-----~~~~~~~~~~~~-~gv~v~~gsD~~~ 346 (478)
+++..+ ...|. .+..|-+. .+. ......+..|.+ .+++|.+.+||..
T Consensus 239 ~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~ 298 (360)
T PRK12595 239 EEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHST 298 (360)
T ss_pred HHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCC
Confidence 766544 33343 34444311 110 012223334443 5788888888754
No 171
>TIGR01496 DHPS dihydropteroate synthase. This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by TIGR00284.
Probab=37.45 E-value=2.9e+02 Score=25.08 Aligned_cols=95 Identities=6% Similarity=-0.051 Sum_probs=56.4
Q ss_pred hHHHHHHHhcCCCCCCeEEEEec--cccccCCHH-H---HHHHHHHHHHc-CCceeEeccCChhhhHHHhhhcCCCCchH
Q 011766 204 SQKELYAKHHHAADGRIRIWFGI--RQIMNATDR-L---LLETRDMAREF-KTGIHMHVAEIPYENQVVMDTRKVDHGTV 276 (478)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~---l~~~~~~a~~~-~~~v~~H~~~~~~~~~~~~~~~~~~~~~~ 276 (478)
...+..+++...|...+++.... +.....+++ + +..+++..++. ++++.+|.........
T Consensus 24 ~~~~~a~~~~~~GA~iIDIG~~st~p~~~~i~~~~E~~rl~~~v~~~~~~~~~plsiDT~~~~vi~~------------- 90 (257)
T TIGR01496 24 KAVAHAERMLEEGADIIDVGGESTRPGADRVSPEEELNRVVPVIKALRDQPDVPISVDTYRAEVARA------------- 90 (257)
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEeCCCHHHHHH-------------
Confidence 45555666667777777752111 111222333 3 55666777776 9999999987543222
Q ss_pred HHHhhhCCCCCCeeeeeeccC-ChhHHHHHHhcCCeEEECcc
Q 011766 277 TFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVKVSHCPA 317 (478)
Q Consensus 277 ~~l~~~~~~~~~~~i~h~~~~-~~~~~~~~~~~~~~~~~~p~ 317 (478)
.+.. ...++.|.... .++.++.+++.++.++..+.
T Consensus 91 -al~~-----G~~iINsis~~~~~~~~~l~~~~~~~vV~m~~ 126 (257)
T TIGR01496 91 -ALEA-----GADIINDVSGGQDPAMLEVAAEYGVPLVLMHM 126 (257)
T ss_pred -HHHc-----CCCEEEECCCCCCchhHHHHHHcCCcEEEEeC
Confidence 1221 22356676665 56778888888888877654
No 172
>PF10055 DUF2292: Uncharacterized small protein (DUF2292); InterPro: IPR018743 Members of this family of hypothetical bacterial proteins have no known function.
Probab=37.11 E-value=44 Score=20.08 Aligned_cols=15 Identities=13% Similarity=0.395 Sum_probs=12.8
Q ss_pred eEEEECCEEEEEcCC
Q 011766 42 GVFVVQDRIKAIGQS 56 (478)
Q Consensus 42 ~v~I~~G~I~~ig~~ 56 (478)
.|.|.||+|++|...
T Consensus 19 ~iiiqdG~vvQIe~~ 33 (38)
T PF10055_consen 19 TIIIQDGRVVQIEKT 33 (38)
T ss_pred EEEEECCEEEEEEhh
Confidence 688999999999764
No 173
>cd01733 LSm10 The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form the core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. LSm10 is an SmD1-like protein which is thought to bind U7 snRNA along with LSm11 and five other Sm subunits to form a 7-member ring structure. LSm10 and the U7 snRNP of which it is a part are thought to play an important role in histone mRNA 3' processing.
Probab=36.86 E-value=1.1e+02 Score=21.80 Aligned_cols=35 Identities=11% Similarity=0.209 Sum_probs=23.7
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEE
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAI 53 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~i 53 (478)
..|++.+.|+++++.++ ....-+.+.|++..|..|
T Consensus 41 ~~MNl~L~~~~~~~~~~--~~~~~~~v~IRG~nI~yI 75 (78)
T cd01733 41 AFMNIRLAKVTIIDRNG--KQVQVEEIMVTGRNIRYV 75 (78)
T ss_pred CCceeEEEEEEEEcCCC--ceeECCcEEEECCEEEEE
Confidence 45778888888775433 222346888888888776
No 174
>PRK08609 hypothetical protein; Provisional
Probab=36.27 E-value=89 Score=32.29 Aligned_cols=47 Identities=15% Similarity=0.121 Sum_probs=31.0
Q ss_pred hHHHHHHhcCCeEEECccchhhccCCCcHHHHHHCCCcEEEcCCCCC
Q 011766 300 TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAP 346 (478)
Q Consensus 300 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gv~v~~gsD~~~ 346 (478)
+.++.+++.|+.+.+.............++.+.+.|+++++|||...
T Consensus 483 ~i~~~a~~~G~~lEINa~~~r~~~~~~~~~~~~e~Gv~i~igSDAH~ 529 (570)
T PRK08609 483 QLIELAKETNTALELNANPNRLDLSAEHLKKAQEAGVKLAINTDAHH 529 (570)
T ss_pred HHHHHHHHhCCEEEEcCCccccCccHHHHHHHHHcCCEEEEECCCCC
Confidence 34556677888887765432111223355788899999999999743
No 175
>cd01723 LSm4 The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form the core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. LSm4 is one of at least seven subunits that assemble onto U6 snRNA to form a seven-membered ring structure. Sm-like proteins exist in archaea as well as prokaryotes that form heptameric and hexameric ring structures similar to those found in eukaryotes.
Probab=35.68 E-value=88 Score=22.17 Aligned_cols=38 Identities=11% Similarity=0.247 Sum_probs=27.1
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcC
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQ 55 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~ 55 (478)
.-+++++.|++..+.+++ +...-+.+.|++..|..|.-
T Consensus 33 ~~mNi~L~~~~~~~~~g~-~~~~~~~v~IRG~~I~~i~~ 70 (76)
T cd01723 33 NWMNIHLREVICTSKDGD-KFWKMPECYIRGNTIKYLRV 70 (76)
T ss_pred CCCceEEEeEEEECCCCc-EeeeCCcEEEeCCEEEEEEc
Confidence 457889999988755543 22223589999999998863
No 176
>cd01725 LSm2 The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form the core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. LSm2 is one of at least seven subunits that assemble onto U6 snRNA to form a seven-membered ring structure. Sm-like proteins exist in archaea as well as prokaryotes that form heptameric and hexameric ring structures similar to those found in eukaryotes.
Probab=35.43 E-value=97 Score=22.32 Aligned_cols=41 Identities=10% Similarity=0.152 Sum_probs=28.1
Q ss_pred CccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCC
Q 011766 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQS 56 (478)
Q Consensus 16 ~~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~ 56 (478)
...|++.+.|+++...++......-+.+.|++..|..|.-.
T Consensus 32 D~~MNi~L~n~~~~~~~~~~~~~~~~~v~IRG~~I~~I~lp 72 (81)
T cd01725 32 DQYLNIKLTNISVTDPEKYPHMLSVKNCFIRGSVVRYVQLP 72 (81)
T ss_pred CCCcccEEEEEEEEcCCCcccccccCeEEEECCEEEEEEeC
Confidence 35678899999887544322222235899999999988743
No 177
>PRK07114 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=34.74 E-value=3.3e+02 Score=24.16 Aligned_cols=95 Identities=9% Similarity=-0.010 Sum_probs=60.3
Q ss_pred cCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHH-hhhCCCCCCeeeeeeccCChhHHHHHHhcC
Q 011766 231 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFL-DKIEFLQNNLLSAHTVWVNHTEIGLLSRAG 309 (478)
Q Consensus 231 ~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~ 309 (478)
..+.+....+.+...+.|+++.=-........+ .++.+ .....-.++.+++-++-++.++.+.+.+.|
T Consensus 23 ~~~~~~a~~~~~al~~gGi~~iEiT~~tp~a~~-----------~i~~l~~~~~~~~p~~~vGaGTVl~~e~a~~a~~aG 91 (222)
T PRK07114 23 HADVEVAKKVIKACYDGGARVFEFTNRGDFAHE-----------VFAELVKYAAKELPGMILGVGSIVDAATAALYIQLG 91 (222)
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEeCCCCcHHH-----------HHHHHHHHHHhhCCCeEEeeEeCcCHHHHHHHHHcC
Confidence 346778888888899999885433332222111 11111 111122245788999999999999999999
Q ss_pred CeEEECccchhhccCCCcHHHHHHCCCcEEEc
Q 011766 310 VKVSHCPASAMRMLGFAPIKEMLHADICVSLG 341 (478)
Q Consensus 310 ~~~~~~p~~~~~~~~~~~~~~~~~~gv~v~~g 341 (478)
..+.++|..+.. -++...+.|++..-|
T Consensus 92 A~FiVsP~~~~~-----v~~~~~~~~i~~iPG 118 (222)
T PRK07114 92 ANFIVTPLFNPD-----IAKVCNRRKVPYSPG 118 (222)
T ss_pred CCEEECCCCCHH-----HHHHHHHcCCCEeCC
Confidence 999999986632 244555666555443
No 178
>PRK03892 ribonuclease P protein component 3; Provisional
Probab=33.59 E-value=3.3e+02 Score=23.82 Aligned_cols=87 Identities=5% Similarity=0.034 Sum_probs=52.0
Q ss_pred CChhHHHHHHhcCCeEEECccchhhccCC----------CcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcc
Q 011766 297 VNHTEIGLLSRAGVKVSHCPASAMRMLGF----------APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKG 366 (478)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~----------~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~ 366 (478)
++.-..+.+++.++.+.++-..-.+..+. .++......++++.++|+..... .+-.-.+|......
T Consensus 118 ~dHVLAKlAa~n~VAIe~~L~plL~~~G~~Rar~L~~~r~~l~L~rKYd~P~VISS~A~s~~-~lRsPRdl~aL~~~--- 193 (216)
T PRK03892 118 IDHVLARMAAKRGVAIGFSLSPLLRANPYERANILRFMMKAWQLVNKYKVPRFITSSAESKW-EVRGPRDLMSLGIN--- 193 (216)
T ss_pred ccHHHHHHHHHcCeEEEEecHHHHhhCchhHHHHHHHHHHHHHHHHHcCCCEEEecCcchhc-cCCCHHHHHHHHHH---
Confidence 34445677788888887776544433221 12333346789999999964331 11111223222211
Q ss_pred cccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 011766 367 REVFANGTTDPAALPAETVLRMATINGAKSVL 398 (478)
Q Consensus 367 ~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lg 398 (478)
-||+.++|....|..|-.++.
T Consensus 194 -----------iGme~~ea~~~Ls~~p~~i~~ 214 (216)
T PRK03892 194 -----------IGMEIPQAKASLSFYPRIILK 214 (216)
T ss_pred -----------hCCCHHHHHHHHHHhHHHHhh
Confidence 269999999999999977653
No 179
>cd01721 Sm_D3 The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. Sm subunit D3 heterodimerizes with subunit B and three such heterodimers form a hexameric ring structure with alternating B and D3 subunits. The D3 - B heterodimer also assembles into a heptameric ring containing D1, D2, E, F, and G subunits. Sm-like proteins exist in archaea as well as prokaryotes which form heptameric and hexameric ring structures similar to those found in eukaryotes.
Probab=32.03 E-value=1.5e+02 Score=20.59 Aligned_cols=36 Identities=14% Similarity=0.193 Sum_probs=22.7
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIG 54 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig 54 (478)
.-|++.++|+.+...+++ ...-+.+.|++..|..|-
T Consensus 32 ~~MNl~L~~~~~~~~~g~--~~~~~~v~IRG~nI~~v~ 67 (70)
T cd01721 32 DNMNCQLKDVTVTARDGR--VSQLEQVYIRGSKIRFFI 67 (70)
T ss_pred CCceeEEEEEEEECCCCc--EeEcCcEEEeCCEEEEEE
Confidence 346777777776644432 334467888888777663
No 180
>PRK05198 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=31.70 E-value=4e+02 Score=24.26 Aligned_cols=121 Identities=12% Similarity=0.063 Sum_probs=72.7
Q ss_pred EeccccccCC-HHHHHHHHHHHHHcCCceeEeccCChhhhHHHh--hhcCCC---CchHHHHhhhCCCCCCeeeeeeccC
Q 011766 224 FGIRQIMNAT-DRLLLETRDMAREFKTGIHMHVAEIPYENQVVM--DTRKVD---HGTVTFLDKIEFLQNNLLSAHTVWV 297 (478)
Q Consensus 224 ~~~~~~~~~~-~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~--~~~~~~---~~~~~~l~~~~~~~~~~~i~h~~~~ 297 (478)
..+.++.... .+=|+-+.+..+++|+++.+.+.+......... +..-++ -+-.+++.+.+..+..+.+..+.+.
T Consensus 56 TSp~sFqG~G~eeGL~~L~~vk~~~GlpvvTeV~~~~~~~~v~~~~DilQIgArn~rn~~LL~a~g~t~kpV~lKrG~~~ 135 (264)
T PRK05198 56 SSIHSFRGPGLEEGLKILQEVKETFGVPVLTDVHEPEQAAPVAEVVDVLQIPAFLCRQTDLLVAAAKTGKVVNIKKGQFL 135 (264)
T ss_pred CCCCCCCCCChHHHHHHHHHHHHHHCCceEEEeCCHHHHHHHHhhCcEEEECchhcchHHHHHHHhccCCeEEecCCCcC
Confidence 3344555566 567888888889999999887766443322111 111111 1234677788877888888999999
Q ss_pred ChhHHHHHHh----cC-CeEEECccchhhc-----cCCCcHHHHHHCCCcEEEcCCC
Q 011766 298 NHTEIGLLSR----AG-VKVSHCPASAMRM-----LGFAPIKEMLHADICVSLGTDG 344 (478)
Q Consensus 298 ~~~~~~~~~~----~~-~~~~~~p~~~~~~-----~~~~~~~~~~~~gv~v~~gsD~ 344 (478)
+++++....+ .| -.+..|-+...+. ..+..+..|.+.+.+|++---|
T Consensus 136 t~~e~~~aaeyi~~~Gn~~vilcERG~tf~y~r~~~D~~~vp~~k~~~lPVi~DpSH 192 (264)
T PRK05198 136 APWDMKNVVDKVREAGNDKIILCERGTSFGYNNLVVDMRGLPIMRETGAPVIFDATH 192 (264)
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCCCCcCCCCeeechhhhHHHhhCCCCEEEeCCc
Confidence 9988754443 33 4566665543111 2334455666677777774443
No 181
>PRK12457 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=30.70 E-value=4.3e+02 Score=24.31 Aligned_cols=120 Identities=14% Similarity=0.129 Sum_probs=71.2
Q ss_pred eccccccCC-HHHHHHHHHHHHHcCCceeEeccCChhhhHHHh--hhc---CCCCchHHHHhhhCCCCCCeeeeeeccCC
Q 011766 225 GIRQIMNAT-DRLLLETRDMAREFKTGIHMHVAEIPYENQVVM--DTR---KVDHGTVTFLDKIEFLQNNLLSAHTVWVN 298 (478)
Q Consensus 225 ~~~~~~~~~-~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~--~~~---~~~~~~~~~l~~~~~~~~~~~i~h~~~~~ 298 (478)
.+.++.... .+-++-+.+..+++|+++.+.+.+..+...... +.. +..-+-.+++.+.+..+..+.+..+.+++
T Consensus 63 Sp~sFqG~G~eeGL~iL~~vk~~~GlpvvTeV~~~~~~~~~ae~vDilQIgAr~~rntdLL~a~~~t~kpV~lKrGqf~s 142 (281)
T PRK12457 63 SIHSYRGVGLDEGLRIFEEVKARFGVPVITDVHEVEQAAPVAEVADVLQVPAFLARQTDLVVAIAKTGKPVNIKKPQFMS 142 (281)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCceEEEeCCHHHHHHHhhhCeEEeeCchhhchHHHHHHHhccCCeEEecCCCcCC
Confidence 334445566 566777778889999999888776544322111 111 11112346777777777788889999999
Q ss_pred hhHHHHHHh----cC-CeEEECccchhhc-----cCCCcHHHHHHC--CCcEEEcCCC
Q 011766 299 HTEIGLLSR----AG-VKVSHCPASAMRM-----LGFAPIKEMLHA--DICVSLGTDG 344 (478)
Q Consensus 299 ~~~~~~~~~----~~-~~~~~~p~~~~~~-----~~~~~~~~~~~~--gv~v~~gsD~ 344 (478)
++++....+ .| -.+..|-+..... ..+..+..|.+. +.+|++---|
T Consensus 143 ~~e~~~aae~i~~~Gn~~vilcERG~~fgy~~~~~D~~~ip~mk~~~t~lPVi~DpSH 200 (281)
T PRK12457 143 PTQMKHVVSKCREAGNDRVILCERGSSFGYDNLVVDMLGFRQMKRTTGDLPVIFDVTH 200 (281)
T ss_pred HHHHHHHHHHHHHcCCCeEEEEeCCCCCCCCCcccchHHHHHHHhhCCCCCEEEeCCc
Confidence 888754433 33 3466665543211 223344556665 7788775444
No 182
>PF01244 Peptidase_M19: Membrane dipeptidase (Peptidase family M19); InterPro: IPR008257 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of peptidases belong to the MEROPS peptidase family M19 (membrane dipeptidase family, clan MJ). The protein fold of the peptidase domain for members of this family resembles that of Klebsiella urease, the type example for clan MJ. Renal dipeptidase (rDP) (3.4.13.19 from EC), also known as microsomal dipeptidase, is a zinc-dependent metalloenzyme that hydrolyzes a wide range of dipeptides. It is involved in renal metabolism of glutathione and its conjugates. It is a homodimeric disulphide-linked glycoprotein attached to the renal brush border microvilli membrane by a GPI-anchor. A glutamate residue has recently been shown [,] to be important for the catalytic activity of rDP. rDP seems to be evolutionary related to hypothetical proteins in the PQQ biosynthesis operons of Acinetobacter calcoaceticus and Klebsiella pneumoniae.; GO: 0008235 metalloexopeptidase activity, 0008239 dipeptidyl-peptidase activity, 0016805 dipeptidase activity, 0006508 proteolysis; PDB: 3NEH_B 2RAG_D 3LU2_A 3B40_A 3LY0_A 3FDG_B 2I5G_B 3S2J_A 3S2N_A 3S2L_A ....
Probab=30.01 E-value=4.8e+02 Score=24.64 Aligned_cols=133 Identities=13% Similarity=0.062 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHcCCceeE-eccCChhhhHHHhhhcCCCCchHHHHhhhCC------CCCCeeeeeeccCChhHHHHHHhc
Q 011766 236 LLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEF------LQNNLLSAHTVWVNHTEIGLLSRA 308 (478)
Q Consensus 236 ~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~i~h~~~~~~~~~~~~~~~ 308 (478)
.=+++++...+.|+.+.+ |+.+ +...+ .++.... ...+.+..|.-.+++++++.+++.
T Consensus 161 ~G~~vV~~mn~lGm~vDvSH~s~-~t~~D--------------v~~~s~~PviaSHSn~ral~~h~RNltDe~iraia~~ 225 (320)
T PF01244_consen 161 FGREVVREMNRLGMLVDVSHLSE-KTFWD--------------VLEISKKPVIASHSNARALCPHPRNLTDEQIRAIAER 225 (320)
T ss_dssp HHHHHHHHHHHHT-EEE-TTB-H-HHHHH--------------HHHH-SSEEEECCEEBTTTS--TTSB-HHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCeeeeccCCH-HHHHH--------------HHhhcCCCEEEeccChHhhCCCCCCCCHHHHHHHHHC
Confidence 345666777888888865 5544 22111 1111110 011233445666889999999999
Q ss_pred CCeEEECccchhhcc---CCCcHHHHHHC--------C-CcEEEcCCCCCCCC------CcCHHHHHHHHHHHhcccccc
Q 011766 309 GVKVSHCPASAMRML---GFAPIKEMLHA--------D-ICVSLGTDGAPSNN------RMSIVDEMYLASLINKGREVF 370 (478)
Q Consensus 309 ~~~~~~~p~~~~~~~---~~~~~~~~~~~--------g-v~v~~gsD~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 370 (478)
|.-+-++....+-.. ..+.+..+++. | -.|++|||...... ...-+..+... +.
T Consensus 226 GGviGi~~~~~fl~~~~~~~~~~~~~~~Hi~y~~~l~G~dhVgiGsDfdg~~~~~~gl~~~~~~~~l~~~-L~------- 297 (320)
T PF01244_consen 226 GGVIGINFYPAFLGDDWDPRASLDDLVDHIDYIVDLVGIDHVGIGSDFDGIDGPPEGLEDPSDLPNLTEE-LL------- 297 (320)
T ss_dssp T-EEEEESSHHHHSTTHSSG-BHHHHHHHHHHHHHHH-GGGEEEE--BTTTSSHBBTBSSGGGHHHHHHH-HH-------
T ss_pred CcEEEEEcchhhhcccccccccHHHHHHHHHHHHHhcCCCeEEECcccCCCCCCCCccCCHHHHHHHHHH-HH-------
Confidence 887666554333211 23333333221 3 26999999632211 11112222111 11
Q ss_pred cCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 011766 371 ANGTTDPAALPAETVLRMATINGAKSV 397 (478)
Q Consensus 371 ~~~~~~~~~ls~~~al~~~T~~pA~~l 397 (478)
+.|+|.+++=+.+-.|.-+.+
T Consensus 298 ------~rG~s~~~i~kI~g~N~lRv~ 318 (320)
T PF01244_consen 298 ------KRGYSEEDIEKILGGNFLRVL 318 (320)
T ss_dssp ------HTTS-HHHHHHHHTHHHHHHH
T ss_pred ------HCCCCHHHHHHHHhHhHHHHh
Confidence 126888887777766665554
No 183
>PRK07328 histidinol-phosphatase; Provisional
Probab=29.91 E-value=68 Score=29.36 Aligned_cols=46 Identities=20% Similarity=0.254 Sum_probs=30.1
Q ss_pred hHHHHHHhcCCeEEECccchhhc-cCC----CcHHHHHHCCCcEEEcCCCC
Q 011766 300 TEIGLLSRAGVKVSHCPASAMRM-LGF----APIKEMLHADICVSLGTDGA 345 (478)
Q Consensus 300 ~~~~~~~~~~~~~~~~p~~~~~~-~~~----~~~~~~~~~gv~v~~gsD~~ 345 (478)
+.++.+++.|+.+.+........ ... .-++.+.+.|+++++|||+.
T Consensus 181 ~il~~~~~~g~~lEiNt~~~r~~~~~~yp~~~il~~~~~~g~~itigSDAH 231 (269)
T PRK07328 181 EALDVIAAAGLALEVNTAGLRKPVGEIYPSPALLRACRERGIPVVLGSDAH 231 (269)
T ss_pred HHHHHHHHcCCEEEEEchhhcCCCCCCCCCHHHHHHHHHcCCCEEEeCCCC
Confidence 45677888898887765322111 111 23466778899999999964
No 184
>PF02811 PHP: PHP domain; InterPro: IPR004013 The PHP (Polymerase and Histidinol Phosphatase) domain is a putative phosphoesterase domain. This family is often associated with an N-terminal region IPR003141 from INTERPRO.; GO: 0003824 catalytic activity; PDB: 2WJE_A 3QY8_A 2WJD_A 2WJF_A 1PB0_B 1M68_A 1M65_A 3E38_B 2W9M_A 3E0F_A ....
Probab=27.94 E-value=79 Score=26.23 Aligned_cols=39 Identities=10% Similarity=0.036 Sum_probs=26.2
Q ss_pred HHHHhcCcceeec--C-CccCHHHHHHHHHHhCCeEEEeccc
Q 011766 132 IELIHSGVTCFAE--A-GGQHVSEMAKAVELLGLRACLVQST 170 (478)
Q Consensus 132 ~~~l~~GvTtv~~--~-~~~~~~~~~~~~~~~g~~~~~~~~~ 170 (478)
..+.+.|++++.- . .........+.....++..+.+..+
T Consensus 23 ~~A~~~Gl~~i~iTDH~~~~~~~~~~~~~~~~~i~vi~G~E~ 64 (175)
T PF02811_consen 23 EQAKEKGLDAIAITDHNNFAGYPDFYKEAKKKGIKVIPGVEI 64 (175)
T ss_dssp HHHHHTTESEEEEEEETTTTTHHHHHHHHHHTTSEEEEEEEE
T ss_pred HHHHHcCCCEEEEcCCcccccchHHHHHHHhcCCceEEeEee
Confidence 4578899998764 2 2233456666677789998877554
No 185
>PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo. It inhibits ISP-1 in the early stages of sporulation and then may be inactivated by a membrane-bound proteinase [].; PDB: 3ISY_A.
Probab=27.67 E-value=31 Score=24.99 Aligned_cols=15 Identities=33% Similarity=0.507 Sum_probs=9.8
Q ss_pred cccCccccEEEEcCC
Q 011766 406 LEAGKKADMVVVDPF 420 (478)
Q Consensus 406 l~~G~~ADlvv~d~~ 420 (478)
..-|+.+||+|.|.+
T Consensus 20 f~sgq~~D~~v~d~~ 34 (82)
T PF12690_consen 20 FPSGQRYDFVVKDKE 34 (82)
T ss_dssp ESSS--EEEEEE-TT
T ss_pred eCCCCEEEEEEECCC
Confidence 457999999999775
No 186
>PRK05718 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=26.74 E-value=4.4e+02 Score=23.14 Aligned_cols=90 Identities=10% Similarity=-0.037 Sum_probs=55.7
Q ss_pred cCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCC
Q 011766 231 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGV 310 (478)
Q Consensus 231 ~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~ 310 (478)
..+.+....+.+...+.|+++.=-...... ..+.+..+....++..+.-++-+++++.+.+.+.|.
T Consensus 23 ~~~~~~a~~i~~al~~~Gi~~iEitl~~~~--------------~~~~I~~l~~~~p~~~IGAGTVl~~~~a~~a~~aGA 88 (212)
T PRK05718 23 INKLEDAVPLAKALVAGGLPVLEVTLRTPA--------------ALEAIRLIAKEVPEALIGAGTVLNPEQLAQAIEAGA 88 (212)
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCcc--------------HHHHHHHHHHHCCCCEEEEeeccCHHHHHHHHHcCC
Confidence 346777778888888888874322222211 112222221112356788888899999999999999
Q ss_pred eEEECccchhhccCCCcHHHHHHCCCcEE
Q 011766 311 KVSHCPASAMRMLGFAPIKEMLHADICVS 339 (478)
Q Consensus 311 ~~~~~p~~~~~~~~~~~~~~~~~~gv~v~ 339 (478)
.+.++|..+. .-++...+.++...
T Consensus 89 ~FivsP~~~~-----~vi~~a~~~~i~~i 112 (212)
T PRK05718 89 QFIVSPGLTP-----PLLKAAQEGPIPLI 112 (212)
T ss_pred CEEECCCCCH-----HHHHHHHHcCCCEe
Confidence 9999998653 22344445544433
No 187
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=26.67 E-value=1.6e+02 Score=23.40 Aligned_cols=79 Identities=18% Similarity=0.145 Sum_probs=43.2
Q ss_pred CeEEeCCCCEEeecccccccccchhhhccccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCc
Q 011766 68 DQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG 147 (478)
Q Consensus 68 ~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~ 147 (478)
+-++|+. ..|.|=+||.|.|....++.-.... .+.+..+ |.....-+.++-..|||.+...-+
T Consensus 7 ~~~fdld-ytiwP~~vdthl~~pfkP~k~~~g~-----------~g~e~~f-----Y~Di~rIL~dLk~~GVtl~~ASRt 69 (144)
T KOG4549|consen 7 AMQFDLD-YTIWPRLVDTHLDYPFKPFKCECGS-----------KGEEMIF-----YDDIRRILVDLKKLGVTLIHASRT 69 (144)
T ss_pred eeEEecc-ceeeeEEEEecccccccccccCccc-----------Ccceeee-----ccchhHHHHHHHhcCcEEEEecCC
Confidence 3566643 5899999999999865443221110 0111111 111222334567889999887655
Q ss_pred cCHHHHHHHHHHhCCe
Q 011766 148 QHVSEMAKAVELLGLR 163 (478)
Q Consensus 148 ~~~~~~~~~~~~~g~~ 163 (478)
..+....+.++...+.
T Consensus 70 ~ap~iA~q~L~~fkvk 85 (144)
T KOG4549|consen 70 MAPQIASQGLETFKVK 85 (144)
T ss_pred CCHHHHHHHHHHhccC
Confidence 5555444455554443
No 188
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=25.56 E-value=1.5e+02 Score=31.77 Aligned_cols=115 Identities=10% Similarity=0.132 Sum_probs=60.0
Q ss_pred ccccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCC---chHH-HHhhhC-------CCCCCeeeeeecc
Q 011766 228 QIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDH---GTVT-FLDKIE-------FLQNNLLSAHTVW 296 (478)
Q Consensus 228 ~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~---~~~~-~l~~~~-------~~~~~~~i~h~~~ 296 (478)
+..+.+......++..|+..|+++.+-.....-.........++-. ...+ ...... .-..+....|+..
T Consensus 586 s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~e 665 (1019)
T KOG0203|consen 586 SMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSE 665 (1019)
T ss_pred hccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEeccc
Confidence 3344455566777889999999987766543333222222222110 0111 111111 1112456678876
Q ss_pred C---ChhHHHHHHhcCCeEEECccchhhccCCCcHHHHHHCCCcEEEcCCC
Q 011766 297 V---NHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDG 344 (478)
Q Consensus 297 ~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gv~v~~gsD~ 344 (478)
+ ++++++.+.+....+++-.++-... .--+..-.+.|-.|++.-|+
T Consensus 666 L~~~~~~qld~il~nh~eIVFARTSPqQK--LiIVe~cQr~GaiVaVTGDG 714 (1019)
T KOG0203|consen 666 LPDMSSEQLDELLQNHQEIVFARTSPQQK--LIIVEGCQRQGAIVAVTGDG 714 (1019)
T ss_pred ccccCHHHHHHHHHhCCceEEEecCccce--EEeEhhhhhcCcEEEEeCCC
Confidence 4 5788888887766555432221110 11223445678888888886
No 189
>cd01724 Sm_D1 The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. Sm subunit D1 heterodimerizes with subunit D2 and three such heterodimers form a hexameric ring structure with alternating D1 and D2 subunits. The D1 - D2 heterodimer also assembles into a heptameric ring containing DB, D3, E, F, and G subunits. Sm-like proteins exist in archaea as well as prokaryotes which form heptameric and hexameric ring structures similar to those found in eukaryotes.
Probab=24.55 E-value=2.4e+02 Score=20.80 Aligned_cols=36 Identities=11% Similarity=0.048 Sum_probs=21.3
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIG 54 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig 54 (478)
..|++.+.|+.++..++ ....-+.+.|++..|..|-
T Consensus 33 ~~MNl~L~~a~~~~~~~--~~~~~~~v~IRG~nI~yi~ 68 (90)
T cd01724 33 PSMNTHLKNVKLTLKGR--NPVPLDTLSIRGNNIRYFI 68 (90)
T ss_pred CceeEEEEEEEEEcCCC--ceeEcceEEEeCCEEEEEE
Confidence 44667777776664322 2333457777777777665
No 190
>PRK00881 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional
Probab=23.65 E-value=2.1e+02 Score=28.86 Aligned_cols=38 Identities=18% Similarity=0.287 Sum_probs=27.9
Q ss_pred HHHHHHhcCcceeecCCcc-CHHHHHHHHHHhCCeEEEe
Q 011766 130 CGIELIHSGVTCFAEAGGQ-HVSEMAKAVELLGLRACLV 167 (478)
Q Consensus 130 ~~~~~l~~GvTtv~~~~~~-~~~~~~~~~~~~g~~~~~~ 167 (478)
....+..+|++.+.-.++. .-.+..+.+...|+.++..
T Consensus 468 tie~aa~~Gv~aIiqPgGSirD~evI~aAne~gIamvfT 506 (513)
T PRK00881 468 GVEAAAKAGITAIIQPGGSIRDEEVIAAADEHGIAMVFT 506 (513)
T ss_pred HHHHHHHcCCeEEEeCCCCCChHHHHHHHHHcCCEEEEC
Confidence 3445789999999887663 2456778889999988653
No 191
>TIGR01856 hisJ_fam histidinol phosphate phosphatase HisJ family. This model represents the histidinol phosphate phosphatase HisJ of Bacillus subtilis, and related proteins from a number of species within a larger family of phosphatases in the PHP hydrolase family. HisJ catalyzes the penultimate step of histidine biosynthesis but shows no homology to the functionally equivalent sequence in E. coli, a domain of the bifunctional HisB protein. Note, however, that many species have two members and that Clostridium perfringens, predicted not to make histidine, has five members of this family; this family is designated subfamily rather than equivalog to indicate that members may not all act as HisJ.
Probab=23.41 E-value=1.1e+02 Score=27.80 Aligned_cols=46 Identities=13% Similarity=0.104 Sum_probs=29.2
Q ss_pred hHHHHHHhcCCeEEECccchhhc-cCCC----cHHHHHHCCCcEEEcCCCC
Q 011766 300 TEIGLLSRAGVKVSHCPASAMRM-LGFA----PIKEMLHADICVSLGTDGA 345 (478)
Q Consensus 300 ~~~~~~~~~~~~~~~~p~~~~~~-~~~~----~~~~~~~~gv~v~~gsD~~ 345 (478)
+.++.+++.|..+.+........ .... -++.+.+.|+++++|||+.
T Consensus 189 ~il~~~~~~g~~lEiNt~g~r~~~~~~yP~~~il~~~~~~g~~itlgSDAH 239 (253)
T TIGR01856 189 RILKLVASQGKALEFNTSGLRKPLEEAYPSKELLNLAKELGIPLVLGSDAH 239 (253)
T ss_pred HHHHHHHHcCCEEEEEcHhhcCCCCCCCCCHHHHHHHHHcCCCEEecCCCC
Confidence 44567788888887665322111 1122 2356678899999999964
No 192
>COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog [Amino acid transport and metabolism]
Probab=23.19 E-value=6.3e+02 Score=23.75 Aligned_cols=144 Identities=14% Similarity=0.126 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHcCCceeE-eccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEE
Q 011766 236 LLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 314 (478)
Q Consensus 236 ~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~ 314 (478)
.=+++++++++.|+.+.+ |+.+............ ++- ..-...+.+..|.-.+++++++.+++.|.-+-+
T Consensus 150 ~Gk~lV~~~N~LgIiiDlSH~s~kt~~Dvl~~s~~-----Pvi----aSHSN~~al~~h~RNl~D~qlkaI~~~gGvIgv 220 (313)
T COG2355 150 FGKELVREMNELGIIIDLSHLSDKTFWDVLDLSKA-----PVV----ASHSNARALVDHPRNLSDEQLKAIAETGGVIGV 220 (313)
T ss_pred HHHHHHHHHHhcCCEEEecccCCccHHHHHhccCC-----ceE----EecCCchhccCCCCCCCHHHHHHHHhcCCEEEE
Confidence 345678889999999865 6655332211110000 000 000112334456666889999999999865433
Q ss_pred C--ccchhhc-cCCCcHH-------HHHHC-C-CcEEEcCCCCCCCCCcCHHHHH-HHHHHHhcccccccCCCCCCCCCC
Q 011766 315 C--PASAMRM-LGFAPIK-------EMLHA-D-ICVSLGTDGAPSNNRMSIVDEM-YLASLINKGREVFANGTTDPAALP 381 (478)
Q Consensus 315 ~--p~~~~~~-~~~~~~~-------~~~~~-g-v~v~~gsD~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ls 381 (478)
. |...... ...+.+. .+.+. | -.|++|||........+-++.. ....+... ..+.|++
T Consensus 221 ~~~~~fl~~~~~~~atldd~v~hI~h~v~~~G~dhVglGsDf~g~~~~p~gled~~~l~~l~~~---------L~~~G~~ 291 (313)
T COG2355 221 NFIPAFLRPGGAARATLDDLVRHIDHFVELVGIDHVGLGSDFDGGTGPPDGLEDVGKLPNLTAA---------LIERGYS 291 (313)
T ss_pred EeehhhccCCCCCCCCHHHHHHHHHHHHHhcCcceeEecccccCCCCCchhhcChhHHHHHHHH---------HHHcCCC
Confidence 2 3222210 0122332 23322 3 3589999974432211122111 11111110 0123577
Q ss_pred HHHHHHHHhHHHHHHc
Q 011766 382 AETVLRMATINGAKSV 397 (478)
Q Consensus 382 ~~~al~~~T~~pA~~l 397 (478)
.+++=+.+-.|--+.+
T Consensus 292 e~~i~~i~~~N~lRV~ 307 (313)
T COG2355 292 EEEIEKIAGENWLRVL 307 (313)
T ss_pred HHHHHHHHHHhHHHHH
Confidence 7777766666665554
No 193
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=23.16 E-value=5.8e+02 Score=27.68 Aligned_cols=42 Identities=10% Similarity=0.204 Sum_probs=33.8
Q ss_pred EeccccccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHH
Q 011766 224 FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV 265 (478)
Q Consensus 224 ~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~ 265 (478)
++.-+..+.++......++.+++.|++|++-..+........
T Consensus 576 vGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI 617 (972)
T KOG0202|consen 576 VGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAI 617 (972)
T ss_pred EEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHH
Confidence 566677778888999999999999999999888876654433
No 194
>PF11068 YlqD: YlqD protein; InterPro: IPR021297 This bacterial family of proteins has no known function. ; PDB: 4DCI_C.
Probab=22.11 E-value=88 Score=25.01 Aligned_cols=14 Identities=14% Similarity=0.238 Sum_probs=12.7
Q ss_pred cceEEEECCEEEEE
Q 011766 40 NGGVFVVQDRIKAI 53 (478)
Q Consensus 40 ~~~v~I~~G~I~~i 53 (478)
+..|+|+||+|.+|
T Consensus 117 ~~EIvvkDG~V~eI 130 (131)
T PF11068_consen 117 GVEIVVKDGKVIEI 130 (131)
T ss_dssp TEEEEEETTEEEEE
T ss_pred CcEEEEECCEEEEe
Confidence 57999999999987
Done!