Query 011766
Match_columns 478
No_of_seqs 160 out of 1342
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 14:53:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011766.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011766hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dzh_A Amidohydrolase; adenosi 100.0 5.3E-56 1.8E-60 442.9 40.0 428 17-474 12-441 (472)
2 4dyk_A Amidohydrolase; adenosi 100.0 1.3E-55 4.5E-60 438.5 39.1 427 17-474 6-434 (451)
3 3lnp_A Amidohydrolase family p 100.0 3.7E-55 1.3E-59 437.2 42.4 428 17-474 21-459 (468)
4 4f0r_A 5-methylthioadenosine/S 100.0 6.7E-55 2.3E-59 432.9 41.3 427 17-474 4-432 (447)
5 3h4u_A Amidohydrolase; signatu 100.0 2E-54 6.7E-59 433.3 42.0 431 16-474 26-470 (479)
6 3ls9_A Triazine hydrolase; atr 100.0 1.7E-54 5.8E-59 431.3 40.7 428 21-474 2-451 (456)
7 4aql_A Guanine deaminase; hydr 100.0 1E-52 3.5E-57 418.2 38.2 424 17-458 29-474 (476)
8 2paj_A Putative cytosine/guani 100.0 3.8E-50 1.3E-54 403.6 37.8 441 17-475 8-475 (492)
9 4f0l_A Amidohydrolase; ssgcid, 100.0 4.9E-49 1.7E-53 391.7 33.4 422 17-475 10-453 (458)
10 3hpa_A Amidohydrolase; signatu 100.0 9.2E-48 3.1E-52 385.1 42.0 440 10-474 20-470 (479)
11 2i9u_A Cytosine/guanine deamin 100.0 1.3E-47 4.4E-52 379.4 36.5 417 16-458 6-431 (439)
12 2ood_A BLR3880 protein; PSI-II 100.0 4.6E-47 1.6E-51 378.3 35.7 418 20-458 4-468 (475)
13 1p1m_A Hypothetical protein TM 100.0 1.8E-47 6.2E-52 374.6 30.8 394 21-475 1-400 (406)
14 3v7p_A Amidohydrolase family p 100.0 6E-48 2E-52 379.0 26.9 400 21-465 2-414 (427)
15 3mdu_A N-formimino-L-glutamate 100.0 3.1E-47 1.1E-51 377.3 31.5 419 23-475 4-448 (453)
16 1ra0_A Cytosine deaminase; alp 100.0 2.1E-42 7.2E-47 341.2 26.0 378 18-461 7-416 (430)
17 2bb0_A Imidazolonepropionase; 100.0 1E-40 3.4E-45 328.3 36.1 378 18-460 4-420 (421)
18 3feq_A Putative amidohydrolase 100.0 6.4E-42 2.2E-46 337.3 26.9 378 18-462 3-417 (423)
19 3gnh_A L-lysine, L-arginine ca 100.0 4.1E-41 1.4E-45 329.4 32.0 363 20-455 3-402 (403)
20 2r8c_A Putative amidohydrolase 100.0 1.4E-41 4.7E-46 334.9 27.8 378 17-461 2-419 (426)
21 2qt3_A N-isopropylammelide iso 100.0 8.3E-41 2.8E-45 327.2 30.6 370 18-460 4-402 (403)
22 2imr_A Hypothetical protein DR 100.0 5.3E-41 1.8E-45 329.7 25.6 366 9-420 26-417 (420)
23 2q09_A Imidazolonepropionase; 100.0 6.8E-40 2.3E-44 321.8 30.5 378 19-459 5-411 (416)
24 2puz_A Imidazolonepropionase; 100.0 7.2E-40 2.5E-44 322.1 30.6 376 18-454 14-418 (419)
25 2p9b_A Possible prolidase; pro 100.0 4.3E-38 1.5E-42 312.8 32.1 383 17-466 11-445 (458)
26 3be7_A Zn-dependent arginine c 100.0 1.1E-37 3.6E-42 305.6 34.2 364 17-459 4-404 (408)
27 2qs8_A XAA-Pro dipeptidase; am 100.0 1.1E-37 3.7E-42 306.3 32.2 366 16-455 4-412 (418)
28 3ooq_A Amidohydrolase; structu 100.0 4.7E-38 1.6E-42 306.3 15.9 364 18-459 4-391 (396)
29 2vun_A Enamidase; nicotinate d 100.0 3.7E-36 1.3E-40 292.4 25.0 354 18-461 1-377 (386)
30 1gkr_A Hydantoinase, non-ATP d 100.0 5.1E-37 1.7E-41 305.4 18.4 373 18-468 1-449 (458)
31 1gkp_A Hydantoinase; hydrolase 100.0 3.5E-37 1.2E-41 306.6 16.6 380 20-469 1-452 (458)
32 2fty_A Dihydropyrimidinase; al 100.0 5.9E-36 2E-40 301.7 25.5 389 18-469 2-518 (559)
33 3icj_A Uncharacterized metal-d 100.0 3.7E-35 1.3E-39 292.7 29.2 362 20-424 37-504 (534)
34 3sfw_A Dihydropyrimidinase; hy 100.0 4.6E-36 1.6E-40 297.7 21.9 381 19-469 1-454 (461)
35 2ogj_A Dihydroorotase; TIM bar 100.0 5.6E-36 1.9E-40 293.9 20.2 370 17-473 13-405 (417)
36 1yrr_A N-acetylglucosamine-6-p 100.0 5.4E-35 1.9E-39 283.5 25.5 348 21-456 2-382 (382)
37 2gwn_A Dihydroorotase; zinc-bi 100.0 2.5E-36 8.5E-41 298.9 13.2 383 18-468 3-448 (452)
38 1nfg_A D-hydantoinase; TIM bar 100.0 1.5E-36 5.3E-41 301.8 9.5 380 19-469 1-451 (457)
39 2vm8_A Dihydropyrimidinase-rel 100.0 9.9E-36 3.4E-40 299.0 13.8 383 17-468 24-480 (501)
40 1xrt_A Dihydroorotase, dhoase; 100.0 5.6E-34 1.9E-38 283.5 24.0 357 17-456 45-467 (467)
41 3e74_A Allantoinase; (beta/alp 100.0 2.5E-34 8.6E-39 284.9 20.7 379 14-469 18-469 (473)
42 1e9y_B Urease subunit beta; hy 100.0 4.3E-33 1.5E-37 279.3 28.1 329 17-456 64-459 (569)
43 2ics_A Adenine deaminase; TIM 100.0 2.9E-34 9.8E-39 278.4 18.9 347 18-459 4-375 (379)
44 2z00_A Dihydroorotase; zinc bi 100.0 4.4E-33 1.5E-37 274.4 27.3 355 21-458 2-426 (426)
45 3mtw_A L-arginine carboxypepti 100.0 1E-33 3.5E-38 274.7 21.9 381 20-454 3-401 (403)
46 2vhl_A N-acetylglucosamine-6-p 100.0 1.2E-32 4E-37 268.5 28.4 351 19-460 3-394 (396)
47 3mpg_A Dihydroorotase, dhoase; 100.0 6.6E-33 2.2E-37 272.8 25.9 366 19-460 1-427 (428)
48 4ac7_C Urease subunit alpha; h 100.0 5.9E-33 2E-37 273.6 23.5 338 16-456 64-460 (570)
49 4ubp_C Protein (urease (chain 100.0 4.7E-33 1.6E-37 274.3 22.1 338 16-456 64-460 (570)
50 3dc8_A Dihydropyrimidinase; TI 100.0 2.9E-33 9.9E-38 277.8 20.5 377 19-468 1-450 (490)
51 3hm7_A Allantoinase; metallo-d 100.0 1.4E-33 4.9E-38 279.2 18.2 366 17-458 4-441 (448)
52 3gip_A N-acyl-D-glutamate deac 100.0 7E-33 2.4E-37 275.7 23.1 372 17-470 5-478 (480)
53 1rk6_A D-aminoacylase; TIM bar 100.0 4.6E-32 1.6E-36 271.6 26.0 119 337-469 373-492 (496)
54 3gri_A Dihydroorotase, dhoase; 100.0 2.3E-31 7.8E-36 261.0 30.1 360 21-458 2-424 (424)
55 2ftw_A Dihydropyrimidine amido 100.0 9.3E-34 3.2E-38 284.9 11.9 383 17-468 6-462 (521)
56 3iv8_A N-acetylglucosamine-6-p 100.0 7E-32 2.4E-36 255.5 22.7 346 21-455 5-381 (381)
57 2vr2_A Dihydropyrimidinase; hy 100.0 3.4E-32 1.2E-36 274.6 20.9 383 18-468 26-485 (541)
58 3mkv_A Putative amidohydrolase 100.0 1.2E-30 4.2E-35 254.5 31.1 371 17-455 2-413 (426)
59 3nqb_A Adenine deaminase 2; PS 100.0 1.8E-30 6E-35 263.0 28.9 332 16-460 32-378 (608)
60 4gy7_A Urease; JACK bean, hydr 100.0 3.9E-32 1.3E-36 281.0 14.2 343 17-455 335-729 (840)
61 1onw_A Isoaspartyl dipeptidase 100.0 5.5E-30 1.9E-34 249.0 27.6 339 19-461 8-383 (390)
62 1o12_A N-acetylglucosamine-6-p 100.0 4.9E-29 1.7E-33 240.0 19.6 316 39-457 28-376 (376)
63 4ep8_C Urease subunit alpha; a 100.0 2.6E-28 8.9E-33 247.9 19.6 112 327-455 343-455 (566)
64 2pgf_A Adenosine deaminase; me 99.6 7.3E-15 2.5E-19 139.7 18.8 242 101-400 91-359 (371)
65 3ggm_A Uncharacterized protein 99.6 2E-15 6.8E-20 110.0 8.5 70 18-91 3-72 (81)
66 3pnu_A Dihydroorotase; TIM bar 99.6 1.4E-13 4.7E-18 129.5 22.9 161 233-422 134-331 (359)
67 3pao_A Adenosine deaminase; st 99.5 8.8E-13 3E-17 122.2 17.0 240 102-400 55-318 (326)
68 3rys_A Adenosine deaminase 1; 99.5 5.5E-12 1.9E-16 117.6 21.5 139 231-400 176-321 (343)
69 2z26_A Dihydroorotase, dhoase; 99.4 4.5E-12 1.6E-16 119.9 18.7 157 232-406 117-312 (347)
70 3iar_A Adenosine deaminase; pu 99.3 8E-10 2.7E-14 103.8 21.7 135 235-400 192-333 (367)
71 2ob3_A Parathion hydrolase; me 99.1 4.4E-09 1.5E-13 98.5 19.5 142 236-398 149-325 (330)
72 2vc7_A Aryldialkylphosphatase; 99.0 3.8E-08 1.3E-12 91.9 22.5 232 127-398 49-314 (314)
73 1bf6_A Phosphotriesterase homo 99.0 2.4E-08 8.1E-13 92.2 19.0 139 235-398 138-291 (291)
74 3tn4_A Phosphotriesterase; lac 98.8 3.8E-07 1.3E-11 85.3 20.8 241 121-397 79-358 (360)
75 3ovg_A Amidohydrolase; structu 98.8 4.2E-07 1.4E-11 85.2 20.3 259 128-415 52-345 (363)
76 3k2g_A Resiniferatoxin-binding 98.8 2.8E-06 9.5E-11 80.0 24.2 233 126-401 87-356 (364)
77 2a3l_A AMP deaminase, AMPD; at 98.7 2.4E-08 8.1E-13 100.4 7.9 128 241-400 504-642 (701)
78 2y1h_A Putative deoxyribonucle 98.7 2.2E-06 7.5E-11 78.0 20.5 132 235-400 126-266 (272)
79 3gtx_A Organophosphorus hydrol 98.7 1.6E-06 5.4E-11 80.9 19.6 243 119-398 57-339 (339)
80 1zzm_A Putative deoxyribonucle 98.7 2.8E-06 9.6E-11 76.7 20.6 134 235-399 114-258 (259)
81 3pnz_A Phosphotriesterase fami 98.6 5E-06 1.7E-10 77.1 19.2 245 127-399 48-328 (330)
82 3rcm_A TATD family hydrolase; 98.5 4E-05 1.4E-09 69.6 24.2 140 234-401 113-266 (287)
83 3rhg_A Putative phophotriester 98.5 3.8E-06 1.3E-10 79.0 17.2 228 128-401 78-346 (365)
84 1xwy_A DNAse TATD, deoxyribonu 98.5 3.8E-06 1.3E-10 76.0 16.5 136 235-399 112-262 (264)
85 1yix_A Deoxyribonuclease YCFH; 98.5 2.6E-05 8.8E-10 70.5 21.2 137 234-400 110-257 (265)
86 4gxw_A Adenosine deaminase; am 98.4 1.4E-06 4.8E-11 82.2 12.2 139 232-400 194-342 (380)
87 3gg7_A Uncharacterized metallo 98.2 1.7E-05 6E-10 70.4 12.6 133 235-399 104-244 (254)
88 3lgd_A Adenosine deaminase CEC 98.1 8.5E-06 2.9E-10 79.3 9.4 117 233-360 307-432 (508)
89 2xio_A Putative deoxyribonucle 98.0 0.00016 5.6E-09 66.5 15.1 140 235-406 127-298 (301)
90 4i6k_A Amidohydrolase family p 98.0 0.00031 1.1E-08 64.4 16.7 139 232-400 134-292 (294)
91 1j6o_A TATD-related deoxyribon 97.9 0.00042 1.4E-08 62.6 15.8 137 234-399 119-265 (268)
92 2gzx_A Putative TATD related D 97.8 0.00079 2.7E-08 60.6 16.6 140 233-401 107-257 (265)
93 3ipw_A Hydrolase TATD family p 97.8 0.0019 6.4E-08 59.4 18.8 137 235-400 154-323 (325)
94 2ffi_A 2-pyrone-4,6-dicarboxyl 97.8 0.00094 3.2E-08 60.9 16.3 139 232-400 121-280 (288)
95 3guw_A Uncharacterized protein 97.7 0.00037 1.3E-08 62.3 12.2 135 234-401 109-250 (261)
96 3cjp_A Predicted amidohydrolas 97.0 0.062 2.1E-06 48.2 18.9 134 233-400 128-265 (272)
97 2dvt_A Thermophilic reversible 97.0 0.0084 2.9E-07 55.6 12.8 142 232-399 142-324 (327)
98 4d9a_A 2-pyrone-4,6-dicarbaxyl 96.9 0.027 9.1E-07 51.6 15.6 142 231-404 134-297 (303)
99 3irs_A Uncharacterized protein 96.8 0.054 1.8E-06 49.2 16.0 147 232-404 135-285 (291)
100 2f6k_A Metal-dependent hydrola 96.5 0.037 1.3E-06 50.6 13.0 144 233-399 133-307 (307)
101 4do7_A Amidohydrolase 2; enzym 96.2 0.094 3.2E-06 47.9 14.2 139 235-400 122-289 (303)
102 3qy7_A Tyrosine-protein phosph 96.0 0.34 1.2E-05 43.0 16.3 83 300-399 148-234 (262)
103 3e2v_A 3'-5'-exonuclease; stru 94.8 0.44 1.5E-05 44.8 13.2 93 236-345 180-305 (401)
104 2wje_A CPS4B, tyrosine-protein 94.6 1.7 5.8E-05 38.0 16.0 84 299-398 151-243 (247)
105 1v77_A PH1877P, hypothetical p 92.3 0.26 8.9E-06 42.2 6.4 87 298-399 113-209 (212)
106 2gwg_A 4-oxalomesaconate hydra 91.3 3.8 0.00013 37.9 13.9 147 232-399 156-332 (350)
107 2hbv_A 2-amino-3-carboxymucona 78.9 18 0.00062 32.9 11.4 27 232-258 155-181 (334)
108 2wm1_A 2-amino-3-carboxymucona 77.7 16 0.00054 33.3 10.6 26 232-257 152-177 (336)
109 2qpx_A Predicted metal-depende 69.8 22 0.00077 33.1 9.5 148 239-400 213-371 (376)
110 1itu_A Renal dipeptidase; glyc 65.7 85 0.0029 29.0 12.5 132 236-399 179-336 (369)
111 4inf_A Metal-dependent hydrola 61.7 45 0.0015 30.9 9.8 28 232-259 188-215 (373)
112 2i5g_A Amidohydrolase; NYSGXRC 49.6 1.5E+02 0.0051 26.8 13.2 92 236-345 140-251 (325)
113 3ij6_A Uncharacterized metal-d 44.7 1.7E+02 0.0058 26.1 11.3 147 232-399 139-305 (312)
114 2ki0_A DS119; beta-alpha-beta, 44.0 22 0.00074 19.0 2.5 22 232-253 12-33 (36)
115 4e38_A Keto-hydroxyglutarate-a 43.6 79 0.0027 27.0 7.6 90 233-341 44-133 (232)
116 2rag_A Dipeptidase; aminohydro 38.8 1.4E+02 0.0048 28.1 9.1 64 236-317 210-283 (417)
117 3b40_A PVDM, probable dipeptid 31.4 3.3E+02 0.011 25.5 12.9 62 236-315 194-265 (417)
118 2q01_A Uronate isomerase; stru 29.0 2.5E+02 0.0086 27.0 9.2 156 237-401 292-474 (497)
119 2npb_A Selenoprotein W; struct 25.9 76 0.0026 22.7 3.8 35 441-475 45-80 (96)
120 3tg2_A Vibriobactin-specific i 25.7 1.4E+02 0.0048 25.1 6.3 89 297-399 125-215 (223)
121 3lab_A Putative KDPG (2-keto-3 23.9 1.6E+02 0.0056 24.7 6.1 73 233-319 23-95 (217)
122 1zco_A 2-dehydro-3-deoxyphosph 22.8 3.7E+02 0.013 23.2 12.8 115 233-347 72-204 (262)
123 3id7_A Dipeptidase; streptomyc 21.3 5E+02 0.017 24.1 10.9 67 236-317 172-245 (400)
No 1
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=100.00 E-value=5.3e-56 Score=442.94 Aligned_cols=428 Identities=27% Similarity=0.444 Sum_probs=354.8
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~ 96 (478)
++++++|+|++|+|++++..++++++|+|+||+|++|++..+.+..+ .++++||++|++|+|||||+|+|+.+..+++
T Consensus 12 ~~~d~li~~~~v~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~--~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g 89 (472)
T 4dzh_A 12 EPCDLLIEAGYVVPIEPHAVVLEDHAVAVSNGVIVAVLPTADARVRF--APARTVSRPDAALMPGLVNAHTHNPMTLLRG 89 (472)
T ss_dssp EEEEEEEEEEEECCSSSTTCCEEEEEEEEETTEEEEEEEHHHHHHHE--EEEEEEEEEEEEEEECEEEEEECGGGGGGTT
T ss_pred CcCcEEEECCEEEecCCCCcEecceEEEEECCEEEEEeCchhhhhcC--CCCeEEeCCCcEEEECccccccChhhHHhcc
Confidence 45789999999999887667889999999999999999866543222 2568999999999999999999999999998
Q ss_pred ccCCCCchHHhhhccccccC-CCChHHHHHHHHHHHHHHHhcCcceeecCCccCHHHHHHHHHHhCCeEEEecccccCCC
Q 011766 97 IADDVDLMTWLHDRIWPYES-NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGE 175 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (478)
...+.++.+|+....|+.+. .+++++.+........+++++|||++.+++ .......+.....|++.......++..
T Consensus 90 ~~~~~~l~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~a~~~~g~r~~~~~~~~~~~- 167 (472)
T 4dzh_A 90 VADDLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGTTCVNENY-FFADVQAAVYKQHGFRALVGAVIIDFP- 167 (472)
T ss_dssp SSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEEC-SCHHHHHHHHHHTTCEEEEEEEECSSC-
T ss_pred ccCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc-cCHHHHHHHHHHhCCeEEEEecccCCC-
Confidence 88888999999888777654 477788888888899999999999999986 456677788888999987776554321
Q ss_pred CCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEec
Q 011766 176 GLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHV 255 (478)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~ 255 (478)
..+. ....+... ...++++++.. .+.+++.++++..+.++++.+.+++++|+++|+++++|+
T Consensus 168 ---~~~~-~~~~~~~~------------~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~ 229 (472)
T 4dzh_A 168 ---TAWA-SSDDEYFA------------RAGELHDQWRD--DPLISTAFAPHAPYTVNDANFERVRMLADQLDMPVHLHT 229 (472)
T ss_dssp ---CSSC-SSHHHHHH------------HHHHHHHHHTT--CSSEEEEEEECCTTTSCHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ---cccc-cCHHHHHH------------HHHHHHHHhCC--CCceEEEEecCCCCCCCHHHHHHHHHHHHHCCCeEEEEe
Confidence 1110 01111111 34445555543 467888888999999999999999999999999999999
Q ss_pred cCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCCcHHHHHHC
Q 011766 256 AEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHA 334 (478)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~ 334 (478)
.+...+........+. ..++.+...+.+..+.++.|+.++++++++++++.|+.+++||.+++.. .+..|++.+++.
T Consensus 230 ~e~~~~~~~~~~~~g~--~~i~~~~~~g~~~~~~~~~H~~~l~~~~i~~l~~~g~~v~~~p~s~~~~~~~~~~~~~~~~~ 307 (472)
T 4dzh_A 230 HETAQEVADSVAQYGQ--RPLARLDRLGLVNDRLIAVHMTQLTEAEIHLCAERGVSVVHCPESNLKLASGFCPACALQRA 307 (472)
T ss_dssp SCCHHHHHHHHHHHSS--CHHHHHHHHTCCSTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHHHTTCCCCCHHHHHHT
T ss_pred CCCHHHHHHHHHHhCC--CHHHHHHHcCCCCCCeEEEeccCCCHHHHHHHHHcCCEEEEChHHHHhcCCCCccHHHHHHC
Confidence 9887766655554443 3678888999999999999999999999999999999999999998876 678999999999
Q ss_pred CCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccE
Q 011766 335 DICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADM 414 (478)
Q Consensus 335 gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADl 414 (478)
|+++++|||++..+++.+++.+++.+....... ...+.++|++++++++|.|||+++|+++++|+|++||.|||
T Consensus 308 Gv~v~lgtD~~~~~~~~~~~~~~~~a~~~~~~~------~~~~~~l~~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADl 381 (472)
T 4dzh_A 308 SVNLAIGTDGCASNNDLDMFSENRTAAILAKAV------ANDATALDAATTLRAATLGGARALGFGDRIGSIEVGKQADL 381 (472)
T ss_dssp TCEEEECCCCTTSSCCCCHHHHHHHHHHHHHHH------HTCTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCE
T ss_pred CCCEEEECCCCcCCCCCCHHHHHHHHHHHhhhh------cCCCCcCCHHHHHHHHHHHHHHHcCCCCCCcccCCCCcCCE
Confidence 999999999987667789999998776543321 11245799999999999999999999988999999999999
Q ss_pred EEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHHHHHH
Q 011766 415 VVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKL 474 (478)
Q Consensus 415 vv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~ 474 (478)
||+|.+++...|..||++.+++.....+|..||++|++||++|++++++.+++.++.++.
T Consensus 382 vv~d~~~~~~~~~~~~~~~l~~~~~~~~V~~v~v~G~~v~~~g~~~~~d~~~i~~~~~~~ 441 (472)
T 4dzh_A 382 VCVDLSALETQPLHHVLSQLIYAAGRHQVTDVWIAGKPKLVQRELIDMDTAALVANARQW 441 (472)
T ss_dssp EEEECCSGGGCSCSCHHHHHHHTCCGGGEEEEEETTEEEEETTEETTCCHHHHHHHHHHH
T ss_pred EEEcCCCCccCCccCHHHHHhhcCCCCCceEEEECCEEEEECCEECcCCHHHHHHHHHHH
Confidence 999999888778889999999888888999999999999999999999999999776543
No 2
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.3e-55 Score=438.53 Aligned_cols=427 Identities=29% Similarity=0.472 Sum_probs=353.6
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~ 96 (478)
++++++|+|++|+|+++....+++++|+|+||+|++|++..+.. ...++++||++|++|+|||||+|+|+.+..+++
T Consensus 6 ~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~ig~~~~~~---~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g 82 (451)
T 4dyk_A 6 NPFDLLLLPTWIVPVEPAGVVLRDHALGIRDGQIALVAPREQAM---RHGATEIRELPGMLLAPGLVNAHGHSAMSLFRG 82 (451)
T ss_dssp CCEEEEEEEEEECCSSSTTCCEESEEEEEETTEEEEEEEHHHHT---TTCEEEEEEEEEEEEEECEEECCCCGGGGGGTT
T ss_pred chhcEEEECCEEEeeCCCCcEEeccEEEEECCEEEEEeCccccc---cCCCCeEEeCCCCEEeecccchhhChhhHHhcc
Confidence 46789999999999877667888999999999999999865431 123568999999999999999999999999998
Q ss_pred ccCCCCchHHhhhccccccC-CCChHHHHHHHHHHHHHHHhcCcceeecCCccCHHHHHHHHHHhCCeEEEecccccCCC
Q 011766 97 IADDVDLMTWLHDRIWPYES-NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGE 175 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (478)
...+.++.+|+....|+.+. .+++++.+........+++++|||++.++. .......+.....|++.......++..
T Consensus 83 ~~~~~~l~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~a~~~~g~r~~~~~~~~~~~- 160 (451)
T 4dyk_A 83 LADDLPLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGITCFSDMY-FYPQAICGVVHDSGVRAQVAIPVLDFP- 160 (451)
T ss_dssp SSCSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEEC-SCHHHHHHHHHHHTCEEEEEEEECSSC-
T ss_pred CCCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc-cCHHHHHHHHHHcCCeEEEEchhhCCC-
Confidence 88888999999888877655 467777777888888999999999999984 446677788888999998776655421
Q ss_pred CCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEec
Q 011766 176 GLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHV 255 (478)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~ 255 (478)
..+ ......... ...++++++.. .+.++..++++..+.++++.+.++++.|+++|+++++|+
T Consensus 161 ---~~~-~~~~~~~~~------------~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~ 222 (451)
T 4dyk_A 161 ---IPG-ARDSAEAIR------------QGMALFDDLKH--HPRIRIAFGPHAPYTVSDDKLEQILVLTEELDASIQMHV 222 (451)
T ss_dssp ---BTT-BSSHHHHHH------------HHHHHHHHTTT--CSSEEEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ---Ccc-ccCHHHHHH------------HHHHHHHHhcC--CCceEEEEecCCCCccCHHHHHHHHHHHHHcCCcEEEEe
Confidence 111 011111111 34455555443 467888888999999999999999999999999999999
Q ss_pred cCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCCcHHHHHHC
Q 011766 256 AEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHA 334 (478)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~ 334 (478)
.+............+. ..++.+...+.+..+.++.|+.++++++++++++.++.+++||.+++.. .+..|++.+++.
T Consensus 223 ~e~~~~~~~~~~~~g~--~~i~~~~~~g~~~~~~~~~H~~~~~~~~~~~l~~~g~~v~~~p~s~~~~~~~~~~~~~~~~~ 300 (451)
T 4dyk_A 223 HETAFEVEQAMERNGE--RPLARLHRLGLLGPRFQAVHMTQVDNDDLAMLVETNSSVIHCPESNLKLASGFCPVEKLWQA 300 (451)
T ss_dssp SCCHHHHHHHHHHHSS--CHHHHHHHTTCCSTTEEEEECCCCCHHHHHHHHHHTCEEEECHHHHHHTTCCCCCHHHHHHH
T ss_pred CCCHHHHHHHHHHhCC--CHHHHHHHCCCCCCCeEEEECCCCCHHHHHHHHHcCCEEEEChhhhhhccCCcccHHHHHhC
Confidence 9887665555544433 3678889999999999999999999999999999999999999998876 678999999999
Q ss_pred CCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccE
Q 011766 335 DICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADM 414 (478)
Q Consensus 335 gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADl 414 (478)
|+++++|||+++.++..+++.+++.+....+... ....++|++++++++|.|||+++|+++++|+|++||.|||
T Consensus 301 Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADl 374 (451)
T 4dyk_A 301 GVNVAIGTDGAASNNDLDLLGETRTAALLAKAVY------GQATALDAHRALRMATLNGARALGLERLIGSLEAGKAADL 374 (451)
T ss_dssp TCCEEECCCCGGGSSCCCHHHHHHHHHHHHHHHH------TCTTSSCHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCE
T ss_pred CCeEEEECCCCccCCCCCHHHHHHHHHHHhhhhc------CCCCCCCHHHHHHHHHHHHHHHcCCCCCCcCcCCCCcCCE
Confidence 9999999999876667899999987765433211 1235799999999999999999999988999999999999
Q ss_pred EEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHHHHHH
Q 011766 415 VVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKL 474 (478)
Q Consensus 415 vv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~ 474 (478)
||||.+++...|..||++.+++.....+|..||++|++||++|++++.+.++++++.++.
T Consensus 375 vv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~ 434 (451)
T 4dyk_A 375 VAFDLSGLAQQPVYDPVSQLIYASGRDCVRHVWVGGRQLLDDGRLLRHDEQRLIARAREW 434 (451)
T ss_dssp EEEECCSGGGCSCSCHHHHHHHHCCGGGEEEEEETTEEEEETTEESSSCHHHHHHHHHHH
T ss_pred EEEeCCCCccCCCCCHHHHhhccCCCCCccEEEECCEEEEECCEECcCCHHHHHHHHHHH
Confidence 999999888888899999998888888999999999999999999999999999877664
No 3
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=100.00 E-value=3.7e-55 Score=437.21 Aligned_cols=428 Identities=29% Similarity=0.490 Sum_probs=351.6
Q ss_pred ccceeEEEecEEEeeCCCC------ceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccc
Q 011766 17 SSSTMILHNAVIVTMDKES------RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~------~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~ 90 (478)
++++++|+|++|+|+++.. .++++++|+|+||+|++|++..+. ...++++||++|++|+|||||+|+|+.
T Consensus 21 ~~~~~li~~~~v~~~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~----~~~~~~viD~~g~~v~PGlID~H~H~~ 96 (468)
T 3lnp_A 21 AHADLRINSHWIIPIENTTDHNLVSNILIDHCLLIKDGIILAIEPQSSC----QIPATETLDLGQQVLMPGWVNAHGHAA 96 (468)
T ss_dssp CCEEEEEEEEEECCSSCC-----CCSCEEEEEEEEETTEEEEEEETTTC----CCCEEEEEECCSEEEEECEEECSCCGG
T ss_pred ccccEEEECCEEEeecCCcccccCccEecceEEEEECCEEEEEeCCccc----cCCCCeEEeCCCcEEEeCeechhhChh
Confidence 4578999999999987765 578899999999999999986531 123568999999999999999999999
Q ss_pred hhhhccccCCCCchHHhhhccccccC-CCChHHHHHHHHHHHHHHHhcCcceeecCCccCHHHHHHHHHHhCCeEEEecc
Q 011766 91 QQLAKGIADDVDLMTWLHDRIWPYES-NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQS 169 (478)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~ 169 (478)
+..+++...+.++.+|+....|+.+. .++.++.+........+++++|||++.++. .......+.....|++.+....
T Consensus 97 ~~~~~g~~~~~~l~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~g~r~~~~~~ 175 (468)
T 3lnp_A 97 MSLFRGLADDLPLMTWLQEHVWPAEAQHVDEHFVKQGTELAIAEMIQSGTTTFADMY-FYPQQSGEAALAAGIRAVCFAP 175 (468)
T ss_dssp GGGGTTSSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECC-SCHHHHHHHHHHHTCEEEEEEE
T ss_pred hhhhccCcCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc-cCHHHHHHHHHHcCCeEEEecc
Confidence 99899888888999999888877654 367777777888889999999999999974 3456667778889999887765
Q ss_pred cccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCC---CCCeEEEEeccccccCCHHHHHHHHHHHHH
Q 011766 170 TMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAA---DGRIRIWFGIRQIMNATDRLLLETRDMARE 246 (478)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~ 246 (478)
.++... .+ .....+... ...++++.+.... .+.++..+.++..+.++++.+.++++.|++
T Consensus 176 ~~~~~~----~~-~~~~~~~~~------------~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~l~~~~~~A~~ 238 (468)
T 3lnp_A 176 VLDFPT----NY-AQNADEYIR------------KAIECNDRFNNHPMNEQGLVQIGFGPHAPYTVSDEPLKEITMLSDQ 238 (468)
T ss_dssp ECSSCC----SS-CSSHHHHHH------------HHHHHHHHHHSCGGGTTCCEEEEEEECCTTTSCHHHHHHHHHHHHH
T ss_pred ccCCCc----cc-ccCHHHHHH------------HHHHHHHHhhcCCcccCceEEEEEEcCCCCCCCHHHHHHHHHHHHH
Confidence 543211 11 011111111 3445555554432 357888888899899999999999999999
Q ss_pred cCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCC
Q 011766 247 FKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGF 325 (478)
Q Consensus 247 ~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~ 325 (478)
.|+++++|+.+............+. ..++.+...+.+..+.++.|+.++++++++++++.++.+++||.+++.. .+.
T Consensus 239 ~g~~v~~H~~e~~~~~~~~~~~~g~--~~i~~~~~~g~l~~~~~~~H~~~~~~~~~~~l~~~g~~v~~~p~s~~~~~~~~ 316 (468)
T 3lnp_A 239 LDMPVQIHLHETDFEVSESLETFNK--RPTQRLADIGFLNERVSCVHMTQVDDGDIKILQKTGASIIHCPESNLKLASGF 316 (468)
T ss_dssp HTCCEEEEESCSHHHHHHHHHHHSS--CHHHHHHHTTCCSTTEEEEECCSCCHHHHHHHHHHCCEEEECHHHHHHTTCCC
T ss_pred cCCcEEEEeCCCHHHHHHHHHHhCC--CHHHHHHHcCCCCCCeEEEeccCCCHHHHHHHHhcCCEEEEChhhhhhcCCCC
Confidence 9999999999886655555444433 3678889999999999999999999999999999999999999998876 678
Q ss_pred CcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccc
Q 011766 326 APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGS 405 (478)
Q Consensus 326 ~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~ 405 (478)
.|++.+++.|+++++|||++..++..+++.+++.+....+... ....++|++++++++|.|||+++|+++++|+
T Consensus 317 ~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~ 390 (468)
T 3lnp_A 317 CPIAKLSAANIPLAIGTDGAASNNDLDMFSETKTAALLAKGVS------QDASAIPAIEALTMATLGGARALGIDDITGS 390 (468)
T ss_dssp CCHHHHHHTTCCEEECCCCTTSSCCCCHHHHHHHHHHHHHHHH------TCTTSSCHHHHHHHHTHHHHHHTTCTTTSSS
T ss_pred CCHHHHHHCCCeEEEECCCCcCCCCCCHHHHHHHHHHHhhhcc------CCCCcCCHHHHHHHHHHHHHHHhCCCCCccc
Confidence 8999999999999999999877667899999987765433211 1245799999999999999999999988999
Q ss_pred cccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHHHHHH
Q 011766 406 LEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKL 474 (478)
Q Consensus 406 l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~ 474 (478)
|++||.|||||||.+++...|..||++.+++.....+|..||++|++||++|++++++.++++++.++.
T Consensus 391 l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~ 459 (468)
T 3lnp_A 391 LKPGKAADIQAIDLNTLSSQPVFDPVSHMVYCTKSTQVSHVWVNGRCLLKNGELTTLNEETLINHAKAW 459 (468)
T ss_dssp CCTTSBCCEEEEECCSGGGCSCSCHHHHHHHSCCGGGEEEEEETTEEEEETTEESSSCHHHHHHHHHHH
T ss_pred cCCCCcCCEEEEeCCCCccCCccCHHHHhhccCCCCCceEEEECCEEEEECCeECCCCHHHHHHHHHHH
Confidence 999999999999999888888899999998888889999999999999999999999999999887664
No 4
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=100.00 E-value=6.7e-55 Score=432.93 Aligned_cols=427 Identities=28% Similarity=0.456 Sum_probs=349.5
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~ 96 (478)
++++++|+|++|+|++++...+.+++|+|+||+|++|++..+.+ ...++++||++|++|+|||||+|+|+.+..+++
T Consensus 4 ~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~---~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g 80 (447)
T 4f0r_A 4 SRYEKIISARWIITVETDGEVLENHAIAIRDGKIAAIIPAADAA---GLEADERLELPDHVLMPGLINLHGHSAMSLLRG 80 (447)
T ss_dssp -CEEEEEEEEEEECCSSTTCEEEEEEEEEETTEEEEEEEHHHHT---TSCEEEEEEEEEEEEEECEEEEEECGGGGGGTT
T ss_pred CcccEEEECCEEEeeCCCCcEeeceEEEEECCEEEEEecccccc---cCCCCeEEeCCCcEEeeCccchhhChhhHhhcc
Confidence 46789999999999887767889999999999999999865432 123568999999999999999999999988888
Q ss_pred ccCCCCchHHhhhccccccC-CCChHHHHHHHHHHHHHHHhcCcceeecCCccCHHHHHHHHHHhCCeEEEecccccCCC
Q 011766 97 IADDVDLMTWLHDRIWPYES-NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGE 175 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (478)
...+.++.+|+....|+.+. .+++++.+........+++++|||++.++. .......+.....|++.+.....++..
T Consensus 81 ~~~~~~~~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~g~r~~~~~~~~~~~- 158 (447)
T 4f0r_A 81 LADDKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTTTINDMY-FYNAAVARAGLASGMRTFVGCSILEFP- 158 (447)
T ss_dssp SSCSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECB-SCHHHHHHHHHHHTCEEEEEEEECSSC-
T ss_pred CCCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc-cCHHHHHHHHHHcCCeEEEEchhcCCC-
Confidence 88888999999888777654 466777777777788999999999999974 345667777888999888766554321
Q ss_pred CCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEec
Q 011766 176 GLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHV 255 (478)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~ 255 (478)
..+ ....++... ...++++++. +.+.+++...++..+.++++.+.+++++|++.|+++++|+
T Consensus 159 ---~~~-~~~~~~~~~------------~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~ 220 (447)
T 4f0r_A 159 ---TNY-ASNADDYIA------------KGMAERSQFL--GEDLLTFTLAPHAPYTVSDDTFRKVVTLAEQEDMLIHCHI 220 (447)
T ss_dssp ---CSS-CSSHHHHHH------------HHHHHHHTTT--TCTTEEEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ---ccc-ccCHHHHHH------------HHHHHHHHhc--CCCceEEEEecCCCCCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 111 001111111 3334444433 3467888888888889999999999999999999999999
Q ss_pred cCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCCcHHHHHHC
Q 011766 256 AEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHA 334 (478)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~ 334 (478)
.+............+. ..++.+...+.+..+.++.|+.++++++++++++.|+.+++||.+++.. .+..+++.+++.
T Consensus 221 ~~~~~~~~~~~~~~g~--~~i~~~~~~g~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~ 298 (447)
T 4f0r_A 221 HETADEVNNSVKEHGQ--RPLARLQRLGLLSPRLVAAHMVHLNDAEVELAARHGLSTAHNPASNMKLASGISPVSKLMDA 298 (447)
T ss_dssp SCCHHHHHHHHHHHSS--CHHHHHHHHTCCSTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHHHTTCCCCCHHHHHHT
T ss_pred CCCHHHHHHHHHHcCC--CHHHHHHHcCCCCCCcEEEeccCCCHHHHHHHHHcCCEEEECchhhhhcCCCCCcHHHHHHC
Confidence 9886655554444432 3678888999999999999999999999999999999999999988776 678999999999
Q ss_pred CCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccE
Q 011766 335 DICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADM 414 (478)
Q Consensus 335 gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADl 414 (478)
|+++++|||+++.++..+++.+++.+........ ....++|++++++++|.|||+++|+++++|+|++|+.|||
T Consensus 299 Gv~v~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~~al~~~T~n~A~~lg~~~~~G~l~~G~~ADl 372 (447)
T 4f0r_A 299 GVAVGIGTDGAASNNKLDMLAETRLAALLAKVGT------LDPTSVPAAAAIRMATLNGARALGIADKVGSVKVGKQADL 372 (447)
T ss_dssp TCEEEECCCCGGGTCCCCHHHHHHHHHHHHHHHH------TCTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCE
T ss_pred CCcEEEeCCCCcCCCCCCHHHHHHHHHHHhhhhc------cCCCCCCHHHHHHHHHHHHHHHhCCCCCccccCCCCcCCE
Confidence 9999999999876667889999987765433211 1235799999999999999999999988999999999999
Q ss_pred EEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHHHHHH
Q 011766 415 VVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKL 474 (478)
Q Consensus 415 vv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~ 474 (478)
||||.+++...|..||++.+++.....+|..||++|++||++|++++++.++++++.++.
T Consensus 373 vv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~ 432 (447)
T 4f0r_A 373 IALDLAQLETAPAFDPISHVVYAAGREQVSHVWVKGRALMRERKLTTLDESDLKARAGDW 432 (447)
T ss_dssp EEEECCSGGGCSCSCHHHHHHHTCCGGGEEEEEETTEEEEETTEESSSCHHHHHHHHHHH
T ss_pred EEEeCCCCCcCCCcChHHHheecCCCCCceEEEECCEEEEECCeECcCCHHHHHHHHHHH
Confidence 999999888788889999998888888999999999999999999999999999877764
No 5
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=100.00 E-value=2e-54 Score=433.30 Aligned_cols=431 Identities=28% Similarity=0.477 Sum_probs=341.7
Q ss_pred CccceeEEEecEE-EeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhh
Q 011766 16 GSSSTMILHNAVI-VTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA 94 (478)
Q Consensus 16 ~~~~~~~i~n~~I-~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~ 94 (478)
+++++++|+|+++ +|+|+...++++++|+|+||+|++|++..+.+ ..++++||++|++|+|||||+|+|+.+..+
T Consensus 26 ~~m~~~li~n~~vv~t~d~~~~~~~~~~V~I~~g~I~~Vg~~~~~~----~~~~~viD~~g~~v~PGlID~H~Hl~~~~~ 101 (479)
T 3h4u_A 26 SRPKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELP----ETADEVLDLRGHLVIPGLVNTHHHMYQSLT 101 (479)
T ss_dssp ---CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGSC----SCCSEEEECTTEEEEECEEECCCCGGGGGS
T ss_pred chhhhheeECCeEEEeeCCCCceecccEEEEECCEEEEEeCCcccC----CCCCeEEeCCCCEEecceeecccccchhhh
Confidence 4568899999985 56676667888999999999999999865432 246789999999999999999999999888
Q ss_pred ccccC--CCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc-----CHHHHHHHHHHhCCeEEEe
Q 011766 95 KGIAD--DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKAVELLGLRACLV 167 (478)
Q Consensus 95 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~-----~~~~~~~~~~~~g~~~~~~ 167 (478)
++... +.++.+|+... ++....+++++.+........+++++|||++.+++.. ......+.....|++....
T Consensus 102 rg~~~~~~~~l~~~l~~~-~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~g~r~~~~ 180 (479)
T 3h4u_A 102 RAVPAAQNAELFGWLTNL-YKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQRIGMRFHAS 180 (479)
T ss_dssp CSCTTTTTCCHHHHHHHH-HHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCCCTTCCHHHHHHHHHHHTCEEEEE
T ss_pred ccccccCCCCHHHHHHHh-hhhhhhCCHHHHHHHHHHHHHHHHhCCeEEEEECccccCCcchHHHHHHHHHHcCCEEEEE
Confidence 87655 77889999775 5666678888888888889999999999999997432 2445677888899998877
Q ss_pred cccccCCCC---CCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCC-CCCeEEEEeccccccCCHHHHHHHHHH
Q 011766 168 QSTMDCGEG---LPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAA-DGRIRIWFGIRQIMNATDRLLLETRDM 243 (478)
Q Consensus 168 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~ 243 (478)
...+..+.. +++............ ...++++++.... .+.++....++..+.++++.+.++++.
T Consensus 181 ~~~~~~~~~~g~~~p~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~ 248 (479)
T 3h4u_A 181 RGAMSVGQRDGGLPPDSVVEREPDILR------------DTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVL 248 (479)
T ss_dssp EEECC----------------CHHHHH------------HHHHHHHHHCCCSTTCSEEEEEEESCTTSSCHHHHHHHHHH
T ss_pred eeecccccccccCCcccccccHHHHHH------------HHHHHHHHhhccCCCCceEEEEecCCCCCCCHHHHHHHHHH
Confidence 655543211 111111111111111 4555566665532 467788888888899999999999999
Q ss_pred HHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-
Q 011766 244 AREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM- 322 (478)
Q Consensus 244 a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~- 322 (478)
|+++|+++++|+.+...+........+ ...++.+...+.+..+.++.|+.++++++++++++.++.+++||.+++..
T Consensus 249 A~~~g~~v~~H~~e~~~~~~~~~~~~g--~~~~~~~~~~g~~~~~~~i~H~~~~~~~~~~~l~~~g~~v~~~p~s~~~l~ 326 (479)
T 3h4u_A 249 AREYGVSLHTHLAENVNDIAYSREKFG--MTPAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFARTGTGVAHCPCSNMRLA 326 (479)
T ss_dssp HHHHTCEEEEEESCSHHHHHC---------CHHHHHHHTTCCSTTEEEEECTTCCHHHHHHHHHHTCEEEECHHHHHHTT
T ss_pred HHhcCCCEEEEeCCCHHHHHHHHHHcC--CCHHHHHHHcCCCCCCeEEEEecCCCHHHHHHHHHcCCeEEEChhHhhhcC
Confidence 999999999999988765554444333 23678889999999999999999999999999999999999999999876
Q ss_pred cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCC
Q 011766 323 LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDND 402 (478)
Q Consensus 323 ~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~ 402 (478)
.+..|++++++.|+++++|||+++.+++.+++.+++.+........ ..+.+|++++++++|.|||+++|+++
T Consensus 327 ~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~~al~~~T~~~A~~lg~~~- 398 (479)
T 3h4u_A 327 SGIAPVKKMRLAGVPVGLGVDGSASNDGAQMVAEVRQALLLQRVGF-------GPDAMTAREALEIATLGGAKVLNRDD- 398 (479)
T ss_dssp CCCCCHHHHHHTTCCEEECCCCTTSSCCCCHHHHHHHHHHHHHHHH-------CTTSCCHHHHHHHTTHHHHHHHTCSS-
T ss_pred CCCCCHHHHHHCCCeEEEeCCCCccCCCcCHHHHHHHHHHHhcccC-------CCCCCCHHHHHHHHHHHHHHHhCCCC-
Confidence 6789999999999999999999876667899999988766543210 12349999999999999999999987
Q ss_pred ccccccCccccEEEEcCCCCCCCC-cCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHHHHHH
Q 011766 403 IGSLEAGKKADMVVVDPFSWPMVP-VHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKL 474 (478)
Q Consensus 403 ~G~l~~G~~ADlvv~d~~~~~~~~-~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~ 474 (478)
+|+|++||.|||||+|.+++...+ ..||+..+++.. ..+|..||++|++||++|++++.+.++++++.++.
T Consensus 399 ~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~-~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~ 470 (479)
T 3h4u_A 399 IGALKPGMAADFAAFDLRQPLFAGALHDPVAALVFCA-PSQTAYTVVNGKVVVREGRLATLDLPPVIERHNAL 470 (479)
T ss_dssp SSSCSTTSBCCEEEEETTSGGGTTCTTSHHHHHHHSS-CCCCSEEEETTEEEEETTEECSSCHHHHHHHHHHH
T ss_pred CCccCCCCcCCEEEEeCCCCccCCcccCHHHHHHccC-CCCcCEEEECCEEEEECCEECCCCHHHHHHHHHHH
Confidence 899999999999999999877777 789999888866 78999999999999999999999999999887765
No 6
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=100.00 E-value=1.7e-54 Score=431.32 Aligned_cols=428 Identities=25% Similarity=0.354 Sum_probs=347.3
Q ss_pred eEEEec-EEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccC
Q 011766 21 MILHNA-VIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (478)
Q Consensus 21 ~~i~n~-~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~ 99 (478)
++|+|+ .|+|+++....+++++|+|+||+|++|++... ...++++||++|++|+|||||+|+|+.++.+++...
T Consensus 2 ~li~n~~~v~t~d~~~~~~~~~~v~i~~g~I~~vg~~~~-----~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~~~ 76 (456)
T 3ls9_A 2 ILIRGLTRVITFDDQERELEDADILIDGPKIVAVGKDLS-----DRSVSRTIDGRGMIALPGLINSHQHLYEGAMRAIPQ 76 (456)
T ss_dssp EEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEESSCC-----CTTCSEEEECTTEEEEECEEEEEECGGGGGGBTCGG
T ss_pred EEEEcCcEEEEcCCCCceeccceEEEECCEEEEeCCCCC-----CCCCCeEEeCCCCEEecCeeecccccchhhhccccc
Confidence 689999 78888877778899999999999999998632 123678999999999999999999999999888743
Q ss_pred --CCCchHHhhhc------cccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc--------CHHHHHHHHHHhCCe
Q 011766 100 --DVDLMTWLHDR------IWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLGLR 163 (478)
Q Consensus 100 --~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~--------~~~~~~~~~~~~g~~ 163 (478)
+.++.+|+... .++. ..+++++.+......+.+++++|||++.+++.. ......+.....|++
T Consensus 77 ~~~~~l~~~l~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~a~~~~g~r 155 (456)
T 3ls9_A 77 LERVTMASWLEGVLTRSAGWWRD-GKFGPDVIREVARAVLLESLLGGITTVADQHLFFPGATADSYIDATIEAATDLGIR 155 (456)
T ss_dssp GSSCCHHHHHHHHHHHHHHHHHT-TSSSHHHHHHHHHHHHHHHHHTTEEEEEEEECCCCSSSCCTHHHHHHHHHHHHTCE
T ss_pred CCCCCHHHHHHHhcccccccccc-ccCCHHHHHHHHHHHHHHHHhCCeeEEEeccccccCcccchhHHHHHHHHHHcCCE
Confidence 78899998766 3332 257888888888889999999999999987321 133457778889999
Q ss_pred EEEecccccCCC---CCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcC-CCCCCeEEEEeccccccCCHHHHHH
Q 011766 164 ACLVQSTMDCGE---GLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHH-AADGRIRIWFGIRQIMNATDRLLLE 239 (478)
Q Consensus 164 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~ 239 (478)
.......++.+. ..++............ ...++++.+.. ...+.+....+++..+.++++.+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 223 (456)
T 3ls9_A 156 FHAARSSMTLGKSEGGFCDDLFVEPVDRVVQ------------HCLGLIDQYHEPEPFGMVRIALGPCGVPYDKPELFEA 223 (456)
T ss_dssp EEEEECCCCCCGGGTCSSCGGGCCCHHHHHH------------HHHHHHHHHCCCSTTCSEEEEECCCCTTTSCHHHHHH
T ss_pred EEEEccccccccccccCCccccccCHHHHHH------------HHHHHHHHhhCcCCCCceEEEEecCCCCCCCHHHHHH
Confidence 887655544321 1111111111111111 44555666554 2356788888999999999999999
Q ss_pred HHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccch
Q 011766 240 TRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASA 319 (478)
Q Consensus 240 ~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~ 319 (478)
+++.|+++|+++++|+.+...+ .......+. ..++.+...+.+..+..+.|+.++++++++++++.++.+++||.++
T Consensus 224 ~~~~a~~~g~~v~~H~~e~~~~-~~~~~~~~~--~~~~~~~~~g~~~~~~~i~H~~~~~~~~~~~l~~~g~~~~~~p~s~ 300 (456)
T 3ls9_A 224 FAQMAADYDVRLHTHFYEPLDA-GMSDHLYGM--TPWRFLEKHGWASDRVWLAHAVVPPREEIPEFADAGVAIAHLIAPD 300 (456)
T ss_dssp HHHHHHHHTCEEEEEECCTTHH-HHHHHHHSS--CHHHHHHHTTCSSTTEEEEECCSCCGGGHHHHHHHTCEEEECHHHH
T ss_pred HHHHHHHCCCCEEEEeCCCchH-HHHHHHhCC--CHHHHHHHcCCCCCCcEEEeccCCCHHHHHHHHHcCCEEEEChhHH
Confidence 9999999999999999988877 555554443 3678888999999999999999999999999999999999999998
Q ss_pred hhc-cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 011766 320 MRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 398 (478)
Q Consensus 320 ~~~-~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lg 398 (478)
+.. .+..|++.+++.|+++++|||+++.++..+++.+++.+........ ....++++|++++++++|.|||+++|
T Consensus 301 ~~l~~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~al~~~T~~~A~~lg 376 (456)
T 3ls9_A 301 LRMGWGLAPIREYLDAGITVGFGTTGSASNDGGNLLGDLRLAALAHRPAD----PNEPEKWLSARELLRMATRGSAECLG 376 (456)
T ss_dssp HHTTCCCCCHHHHHHTTCEEEECCCCTTSSCCCCHHHHHHHHHHHTGGGS----TTCGGGSCCHHHHHHHTTHHHHHHTT
T ss_pred hhcCCCcchHHHHHHCCCcEEEECCCCccCCCCCHHHHHHHHHHHhcccc----ccccccCCCHHHHHHHHHHHHHHHhC
Confidence 877 7789999999999999999999876667899999998876654321 01123369999999999999999999
Q ss_pred CCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHHHHHH
Q 011766 399 WDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKL 474 (478)
Q Consensus 399 l~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~ 474 (478)
+++ +|+|++||.|||||||.+++...+..||++.+++.....+|..||++|++||++|++++.+.++++++.++.
T Consensus 377 ~~~-~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~~~~~~ 451 (456)
T 3ls9_A 377 RPD-LGVLEEGRAADIACWRLDGVDRVGVHDPAIGLIMTGLSDRASLVVVNGQVLVENERPVLADLERIVANTTAL 451 (456)
T ss_dssp CTT-SSCCSTTSBCCEEEEESCSGGGTTBSSHHHHHHHCCSBCCCSEEEETTEEEEETTEESSSCHHHHHHHHHHH
T ss_pred CCC-CCccCCCCccCEEEEeCCCCccCCCCChHHHhhccCCCCCeeEEEECCEEEEECCEeCCCCHHHHHHHHHHH
Confidence 987 899999999999999999888888889999998888778999999999999999999999999999888775
No 7
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=100.00 E-value=1e-52 Score=418.16 Aligned_cols=424 Identities=21% Similarity=0.342 Sum_probs=341.5
Q ss_pred ccceeEEEecEEEeeCC-CCceeecceEEEEC-CEEEEEcCChhhh---hhhccCCCeEEeC-CCCEEeecccccccccc
Q 011766 17 SSSTMILHNAVIVTMDK-ESRVFRNGGVFVVQ-DRIKAIGQSADIL---QQFSQMADQIIDL-QSQILLPGFVNTHVHTS 90 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~-~~~~~~~~~v~I~~-G~I~~ig~~~~~~---~~~~~~~~~viD~-~G~~v~PGfID~H~H~~ 90 (478)
++.+++|+|..|++.+. ...++++++|+|+| |||++|++..+.+ ...+..+.++||+ +|++|+|||||+|+|+.
T Consensus 29 ~~~~~~~~g~~i~~~~~~~~~~~~~~~v~I~~~g~I~~vg~~~~~~~~~~~~~~~~~~viD~~~g~~v~PG~ID~H~H~~ 108 (476)
T 4aql_A 29 PPLAHIFRGTFVHSTWTCPMEVLRDHLLGVSDSGKIVFLEEASQQEKLAKEWCFKPCEIRELSHHEFFMPGLVDTHIHAS 108 (476)
T ss_dssp --CCEEEEEEEEECCSSCSCEEEEEEEEEECTTSBEEEEEEGGGHHHHHHHTTCCGGGCEECCTTCEEEECEEEEEEEGG
T ss_pred CCccEEEEccEEecCCCCceeEecCcEEEEecCCeEEEecCcchhhhhhhhccCCCceEEEcCCCCEEeCCeeccccchH
Confidence 45678999999998643 45678899999998 9999999875432 1112235689995 59999999999999999
Q ss_pred hhhhccccCCCCchHHhhhccccccCCCChHHHHHHHHH-HHHHHHhcCcceeecCCccCHHH---HHHHHHHhCCeEEE
Q 011766 91 QQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLL-CGIELIHSGVTCFAEAGGQHVSE---MAKAVELLGLRACL 166 (478)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~GvTtv~~~~~~~~~~---~~~~~~~~g~~~~~ 166 (478)
++.+++...+.++.+|+..+.|+.+..+.+++.+..... ...+++++||||+.+++..+... ..+.....|++...
T Consensus 109 ~~~~rg~~~d~~l~~wL~~~~~p~e~~~~~~~~~~~~~~~~~~e~l~~G~Tt~~~~~~~~~~~~~~~~~a~~~~G~r~~~ 188 (476)
T 4aql_A 109 QYSFAGSSIDLPLLEWLTKYTFPAEHRFQNIDFAEEVYTRVVRRTLKNGTTTACYFATIHTDSSLLLADITDKFGQRAFV 188 (476)
T ss_dssp GGGGTTSCCCSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHhcCCCHHHHHHHhhhhHHHhcCCHHHHHHHHHHHHHHHHHCCeeEEEEecccCchHHHHHHHHHHHhCCEEEE
Confidence 999999999999999999999999888887775555554 44689999999999886655543 57778899999998
Q ss_pred ecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHH
Q 011766 167 VQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMARE 246 (478)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~ 246 (478)
+...++.+...+. + .......+. +.+++++++.....+.++..++++..++++++.++++.++|++
T Consensus 189 ~~~~~d~~~~~p~-~-~~~~~~~l~------------~~~~~i~~~~~~~~~~v~~~l~p~~~~~~s~e~l~~~~~~A~~ 254 (476)
T 4aql_A 189 GKVCMDLNDTFPE-Y-KETTEESIK------------ETERFVSEMLQKNYSRVKPIVTPRFSLSCSETLMGELGNIAKT 254 (476)
T ss_dssp ECEECSCCSSCTT-S-CCCHHHHHH------------HHHHHHHHHHHHTCSSEEECBEECCTTTSCHHHHHHHHHHHHH
T ss_pred eeccccCCCCCcc-c-ccCHHHHHH------------HHHHHHHHHhcCCCCceEEEEeCCcCCcCCHHHHHHHHHHHHH
Confidence 8877765432221 1 112222233 5666677766555678888899999999999999999999999
Q ss_pred cCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCC
Q 011766 247 FKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGF 325 (478)
Q Consensus 247 ~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~ 325 (478)
+|+++++|+.+...+...+...++....+++.+...+.+..+.++.|+.++++++++++++.++.+++||.+++.. .+.
T Consensus 255 ~g~~v~~H~~e~~~e~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~H~~~l~~~~~~~l~~~g~~v~~~P~sn~~l~~g~ 334 (476)
T 4aql_A 255 RDLHIQSHISENRDEVEAVKNLYPSYKNYTSVYDKNNLLTNKTVMAHGCYLSAEELNVFHERGASIAHCPNSNLSLSSGF 334 (476)
T ss_dssp TTCCEEEEESCSHHHHHHHHHHCTTSSSHHHHHHTTTCCSTTEEEEECTTCCHHHHHHHHHHTCEEEECHHHHHHTTCCC
T ss_pred cCCceEEEecCCHHHHHHHHHHhCCCCCHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHcCCEEEECchhhhhhCcch
Confidence 9999999999988888777777665446889999999999999999999999999999999999999999999877 778
Q ss_pred CcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccc
Q 011766 326 APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGS 405 (478)
Q Consensus 326 ~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~ 405 (478)
.|++++++.|+++++|||+++ .++.+++.+++.+....+..... .....++|++++|+++|.|||+++|+++++|+
T Consensus 335 ~p~~~~~~~Gv~v~lGtD~~~-~~~~~~~~~~~~a~~~~~~~~~~---~~~~~~l~~~~al~~aT~~~A~~lgl~~~~G~ 410 (476)
T 4aql_A 335 LNVLEVLKHEVKIGLGTDVAG-GYSYSMLDAIRRAVMVSNILLIN---KVNEKSLTLKEVFRLATLGGSQALGLDGEIGN 410 (476)
T ss_dssp CCHHHHHHTTCEEEECCCTTT-SSCCCHHHHHHHHHHHHHHHHHT---TSSSSCCCHHHHHHHHTHHHHHHTTCTTTSSS
T ss_pred HHHHHHHHCCCcEEEeCCCCC-CCCCCHHHHHHHHHHHHhhhhcc---cCCCCcCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 999999999999999999864 35688999998876554321110 11335799999999999999999999988999
Q ss_pred cccCccccEEEEcCCCCC----C-------CCcCChhhhhhhccCCCCeeEEEEccEEEEECCe
Q 011766 406 LEAGKKADMVVVDPFSWP----M-------VPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKK 458 (478)
Q Consensus 406 l~~G~~ADlvv~d~~~~~----~-------~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~ 458 (478)
|++||.|||||+|.+... . .+..||++.+++.....+|..|||+|++|++.+.
T Consensus 411 l~~G~~ADlvv~d~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~~~~~V~~v~v~G~~v~~~~~ 474 (476)
T 4aql_A 411 FEVGKEFDAILINPKASDSPIDLFYGDFFGDISEAVIQKFLYLGDDRNIEEVYVGGKQVVPFSS 474 (476)
T ss_dssp CCTTSBCCEEEECTTCTTCSCCCCTHHHHSSSTTHHHHHHHHHCCGGGEEEEEETTEEEECCC-
T ss_pred eCCCCCCCEEEEcCCCCCCccccccccccCCchhcHHHHHhhcCCCCCccEEEECCEEEecCCC
Confidence 999999999999998322 1 1246788889998888899999999999998754
No 8
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=3.8e-50 Score=403.59 Aligned_cols=441 Identities=24% Similarity=0.321 Sum_probs=302.7
Q ss_pred ccceeEEEecE-EEeeCCCCc-----eeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccc
Q 011766 17 SSSTMILHNAV-IVTMDKESR-----VFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (478)
Q Consensus 17 ~~~~~~i~n~~-I~t~d~~~~-----~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~ 90 (478)
++++++|+|++ |+|++ ... .+.+++|+|+||||++|++..+ ..++++||++|++|+|||||+|+|+.
T Consensus 8 ~~~~~li~n~~~i~~~~-~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~------~~~~~viD~~G~~v~PG~ID~H~H~~ 80 (492)
T 2paj_A 8 TQPSTLIRNAAAIMTGG-RGTADDPSRVPGPDIRIVGDTIDAIGALAP------RPGETIVDATDCVIYPAWVNTHHHLF 80 (492)
T ss_dssp --CEEEEECBSEEBCCC-CSSSSSCSBCCCCCEEEETTEEEEESSCCC------CTTCEEEECBTCEEEECEECCCCCGG
T ss_pred CCCCeEEECCEEEEecC-CccccccceecccEEEEECCEEEEEcCCCC------CCCCeEEECCCcEEeeCccccccChh
Confidence 34689999999 99876 220 3467899999999999997542 12468999999999999999999998
Q ss_pred hhhhcccc--CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC--------HHHHHHHHHHh
Q 011766 91 QQLAKGIA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------VSEMAKAVELL 160 (478)
Q Consensus 91 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~--------~~~~~~~~~~~ 160 (478)
....++.. .+.++.+|+....|+....+++++.+........+++++||||+++++... .....+.....
T Consensus 81 ~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~ 160 (492)
T 2paj_A 81 QSLLKGEPAGLDATLTPWLAATPYRFRALFDERRFRLAARIGLIELARSGCATVADHNYVYYPGMPFDSSAILFEEAEKL 160 (492)
T ss_dssp GGGCCSCC-----------------CGGGCCHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCTTCSSCHHHHHHHHHHHT
T ss_pred hHhhcCccCCCCCCHHHHHHhcccchhhcCCHHHHHHHHHHHHHHHHhcCcEEEEechhhcccccccchHHHHHHHHHHc
Confidence 76655433 345677898887788777788888777777788899999999999976321 24455556677
Q ss_pred CCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCC-CCeEEEEecccc-ccCCHHHHH
Q 011766 161 GLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAAD-GRIRIWFGIRQI-MNATDRLLL 238 (478)
Q Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~l~ 238 (478)
+++.+.....++.... ........... ...........++++.+..... +.++....++.. +..+++.+.
T Consensus 161 g~r~~~~~~~~~~~~~----~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 232 (492)
T 2paj_A 161 GLRFVLLRGGATQTRQ----LEADLPTALRP----ETLDAYVADIERLAARYHDASPRAMRRVVMAPTTVLYSISPREMR 232 (492)
T ss_dssp TCEEEEEECCCSCCCS----CSTTSCGGGCC----CCHHHHHHHHHHHHHHTCCCSTTCSEEEEECCTTTTTSSCHHHHH
T ss_pred CCEEEEEchhhccccc----ccccCCccccc----cCHHHHHHHHHHHHHHhccCCCCCceEEEEecccCCCCCCHHHHH
Confidence 8888765443322100 00000000000 0000001133444554443222 456666777776 778999999
Q ss_pred HHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccc
Q 011766 239 ETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPAS 318 (478)
Q Consensus 239 ~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~ 318 (478)
++++.+++.|+++++|+.+...+........+ ...++.+...+.+..+.++.|+.++++++++++++.|+.+++||.+
T Consensus 233 ~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~g--~~~~~~~~~~g~~~~~~~i~H~~~~~~~~i~~l~~~gv~v~~~p~~ 310 (492)
T 2paj_A 233 ETAAVARRLGLRMHSHLSETVGYQDSAYSMYG--KSPVAFCGEHDWLGSDVWYAHLVKVDADEIALLAQTGTGVAHCPQS 310 (492)
T ss_dssp HHHHHHHHTTCEEEEECC-------------C--CCHHHHHHHTTCCSTTEEEESCCSCCHHHHHHHHHHTCEEEECHHH
T ss_pred HHHHHHHHcCCcEEEEeCCChHHHHHHHHHcC--CCHHHHHHHCCCCCCCcEEEEEecCCHHHHHHHHHcCCEEEECchh
Confidence 99999999999999999876544443333222 2356677777888888899999999999999999999999999998
Q ss_pred hhhc-cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccc---cccCC-----CCCCCCCCHHHHHHHH
Q 011766 319 AMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGRE---VFANG-----TTDPAALPAETVLRMA 389 (478)
Q Consensus 319 ~~~~-~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~ls~~~al~~~ 389 (478)
+.+. .+.+|++.+++.|+++++|||+++.+...+++.+++.+..+..... .+..+ ....+++|+++||+++
T Consensus 311 ~~~l~~~~~p~~~~~~~Gv~v~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~a 390 (492)
T 2paj_A 311 NGRLGSGICPVREMADAGVPVSIGVDGAASNEAADMISEVHMTWLAQRARLGMLAQPAYRGGSFEGGAGAASIAEVIHWG 390 (492)
T ss_dssp HHCC-----CCTTHHHHTCCEEECCCHHHHCSCCSHHHHHHHHHHHHHHTC-------------------CCHHHHHHHH
T ss_pred hcccCCCCCCHHHHHHCCCcEEEeCCCCCCCCCCCHHHHHHHHHHHhhhhcccccccccccccccCCcCcCCHHHHHHHH
Confidence 8765 4678999999999999999998654445789998887665433210 00000 0123569999999999
Q ss_pred hHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHH
Q 011766 390 TINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQ 469 (478)
Q Consensus 390 T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~ 469 (478)
|.|||+++|++ ++|+|++||+|||||+|.++++..|..||+..+.+.....+|..||++|++||++|+++..+.+++.+
T Consensus 391 T~~~A~~lgl~-~~Gsl~~Gk~ADlvvld~~~~~~~~~~~p~~~i~~~~~~~~v~~v~v~G~~v~~~g~~~~~d~~~~~~ 469 (492)
T 2paj_A 391 TAGGARVMGLD-EVGKVAVGYAADIAVYRLDDPRYFGLHDPAIGPVASGGRPSVMALFSAGKRVVVDDLIEGVDIKELGG 469 (492)
T ss_dssp THHHHHHHTCT-TSSCCSTTSBCCEEEEECCSGGGTTCSSGGGHHHHSCSCCEEEEEEETTEEEEETTBCTTCCHHHHHH
T ss_pred HHHHHHHhCCC-CccccCCCCccCEEEEeCCCcccCCccCHHHHHHhcCCCCCceEEEECCEEEEECCeeccCCHHHHHH
Confidence 99999999997 78999999999999999997666667788888877666678999999999999999999999999998
Q ss_pred HHHHHh
Q 011766 470 LQDKLL 475 (478)
Q Consensus 470 ~~~~~~ 475 (478)
+.++..
T Consensus 470 ~~~~~~ 475 (492)
T 2paj_A 470 EARRVV 475 (492)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877654
No 9
>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=4.9e-49 Score=391.66 Aligned_cols=422 Identities=17% Similarity=0.142 Sum_probs=322.9
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~ 96 (478)
++++++++|+.+. + ..+++++|+|+||||++|++..+ .++||++|++|+|||||+|+|+.+..+++
T Consensus 10 ~m~~l~~~~~~~~--~---~~~~~~~v~I~~g~I~~Ig~~~~---------~~~iD~~g~~v~PGlID~H~H~~~~~~rg 75 (458)
T 4f0l_A 10 SQHFIHARQALLP--D---GWAENVRIGIAGGVICSIETGVL---------AGPDDERQSVVVAGMANLHSHAFQYGMAG 75 (458)
T ss_dssp -CEEEEEEEEEET--T---EEEEEEEEEEETTEEEEEECSCC---------CCTTCEEEEEEEECEEEEEECGGGGGGTT
T ss_pred chhHhhhcceecc--C---ccccCceEEEECCEEEEEeCCCc---------cccccCCCCEEccCceecccchhhhhhcc
Confidence 3567888888663 2 45788999999999999998532 35799999999999999999999988887
Q ss_pred ccC-----CCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC--------------HHHHHHHH
Q 011766 97 IAD-----DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------------VSEMAKAV 157 (478)
Q Consensus 97 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~--------------~~~~~~~~ 157 (478)
... +.++.+|+. ..|+....+++++.+........+++++|||++.++...+ .....+..
T Consensus 76 ~~~~~~~~~~~~~~w~~-~~~~~~~~~~~e~~~~~~~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~ 154 (458)
T 4f0l_A 76 LAERRGPSADSFWSWRE-IMYKFALTMTPEQAEAVALRLYVDMLEAGFTRVGEFHYLHHDCDGTPYANLSEMADRIAAAA 154 (458)
T ss_dssp SSCBCCSCSSTTHHHHH-HHHHHHHHCCHHHHHHHHHHHHHHHHHTTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHH
T ss_pred cccccccCCCcHHHHHH-HhhhhhhhCCHHHHHHHHHHHHHHHHhcCCcEEEeeeeeccccccccccchhhhHHHHHHHH
Confidence 654 677888975 4566667788888888888899999999999999853211 34667788
Q ss_pred HHhCCeEEEecccccCCCC--CCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHH
Q 011766 158 ELLGLRACLVQSTMDCGEG--LPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDR 235 (478)
Q Consensus 158 ~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (478)
...|++.......+..+.. ..+............ .......+..+.+.. .+.+.+.++++..+.++++
T Consensus 155 ~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 224 (458)
T 4f0l_A 155 TTAGMGLTLLPVFYAHSGFGGAAANEGQRRFINDPE--------RFARLIEGCRKTLEG--FEGAVLGVAPHSLRAVTPD 224 (458)
T ss_dssp HHHTCEEEEEEEECCEEETTTEECCGGGTTTCCCHH--------HHHHHHHHHHHHHTT--CTTCEECBEECBTTTSCHH
T ss_pred HHcCCeEEEecchhccccccccCCchhhhhhhcCHH--------HHHHHHHHHHHHhcc--CCceEEEEecCCcCcCCHH
Confidence 8899999876655432210 000000000000000 000011222222222 3456666788888999999
Q ss_pred HHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEEC
Q 011766 236 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHC 315 (478)
Q Consensus 236 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~ 315 (478)
.++.+.++|+ |+++++|+.+...+...+....+. ..++.+...+.+..+.++.|+.++++++++++++.++.+++|
T Consensus 225 ~l~~~~~~a~--g~~v~~H~~e~~~~~~~~~~~~g~--~~~~~l~~~g~l~~~~~~~H~~~~~~~~~~~l~~~g~~~~~~ 300 (458)
T 4f0l_A 225 ELDSVTQLLP--DAPVHIHVAEQVKEVEDCIAWSGK--RPVEWLLDHQDVTARWCLIHATHMSDEETKHMAKAGAIAGLC 300 (458)
T ss_dssp HHHHHTTSST--TSCEEEEESCSHHHHHHHHHHHSS--CHHHHHHHHSCCCTTEEEEECCSCCHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHhc--CCCEEEEeCCCHHHHHHHHHHhCC--CHHHHHHHcCCCCCCeEEEEeccCCHHHHHHHHHcCCeEEEC
Confidence 9999999998 999999999888777776665543 366788888999999999999999999999999999999999
Q ss_pred ccchhhc-cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHH
Q 011766 316 PASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGA 394 (478)
Q Consensus 316 p~~~~~~-~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA 394 (478)
|.++..+ .+..|++.++++|+++++|||.. +..+++.+++.+....+........+..+++++++++|+++|.|||
T Consensus 301 p~s~~~l~~~~~~~~~~~~~Gv~v~lgtD~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~~A 377 (458)
T 4f0l_A 301 PVTEANLGDGTFNATEFAAAGGKFGIGSDSN---VLIGIGDELRQLEYSQRLYHRARNVLAANEGSTGRALFDGAVLGGN 377 (458)
T ss_dssp HHHHHHTTCCCCCHHHHHHTTCEEEECCBTT---SSCCHHHHHHHHHHHHHHHHTCSSCSCSTTSBHHHHHHHHHHHHHH
T ss_pred ccccccccCCCccHHHHHHCCCeEEEECCCC---CCCCHHHHHHHHHHHHhhhccCccccCCcccCCHHHHHHHHHHHHH
Confidence 9998877 67899999999999999999953 3568999988776544322111111223457999999999999999
Q ss_pred HHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHHHHHH
Q 011766 395 KSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKL 474 (478)
Q Consensus 395 ~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~ 474 (478)
+++|+ ++|+|++||.|||||+|.+++...+..|+++.+++.... +|..||++|++||++|++ ++.+++.+.+++.
T Consensus 378 ~~lg~--~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~-~v~~v~v~G~~v~~~g~~--~d~~~i~~~~~~~ 452 (458)
T 4f0l_A 378 IAMGR--PEDGLKKGASADFVSLDVERLPHAKGDVVLDGWIFAGRA-HVCDVWVRGVKQVEGGRH--RLRDEAERAFQKA 452 (458)
T ss_dssp HHTTC--TTCSSSTTSBCCEEEEECTTSTTCCHHHHHHHHHHTSCC-EEEEEEETTEEEEETTEE--TTHHHHHHHHHHH
T ss_pred HHhCC--CCCcCCCCCcCCEEEEeCCCCccCCcccHHHhCeEcCCC-CceEEEECCEEEEECCEe--CCHHHHHHHHHHH
Confidence 99999 479999999999999999987777778888888888777 999999999999999998 5788888877765
Q ss_pred h
Q 011766 475 L 475 (478)
Q Consensus 475 ~ 475 (478)
.
T Consensus 453 ~ 453 (458)
T 4f0l_A 453 L 453 (458)
T ss_dssp H
T ss_pred H
Confidence 4
No 10
>3hpa_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified}
Probab=100.00 E-value=9.2e-48 Score=385.11 Aligned_cols=440 Identities=27% Similarity=0.441 Sum_probs=316.0
Q ss_pred CCCCCCCccceeEEEecEE-EeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccc
Q 011766 10 SSSGSLGSSSTMILHNAVI-VTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVH 88 (478)
Q Consensus 10 ~~~~~~~~~~~~~i~n~~I-~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H 88 (478)
+|..+...+.+++|+|++| +|+|+..+++++++|+|+||||++||+..+. +..+++|||++|++|+|||||+|+|
T Consensus 20 ap~~~~~~p~~llI~na~vi~T~D~~~~vi~~gdV~I~dgrI~aVG~~~~~----~~~~~~vIDa~G~~v~PG~ID~H~H 95 (479)
T 3hpa_A 20 APNTSSSRPKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAEL----PETADEVLDLRGHLVIPGLVNTHHH 95 (479)
T ss_dssp ---------CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGS----CSCCSEEEECTTEEEEECEEECCCC
T ss_pred CCCCCCCCCCCEEEECCEEEEeeCCCCCEEcCcEEEEECCEEEEEeCCccC----CCCCCeEEECCCCEEeeCceeHhhC
Confidence 4444555667999999985 5788877889999999999999999986653 3346789999999999999999999
Q ss_pred cchhhhcccc--CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCc-----cCHHHHHHHHHHhC
Q 011766 89 TSQQLAKGIA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QHVSEMAKAVELLG 161 (478)
Q Consensus 89 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~-----~~~~~~~~~~~~~g 161 (478)
+.++..++.. .+.++.+|+... ++.......+..+........+++..|+|++.+... .............+
T Consensus 96 ~~~~~~~g~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g 174 (479)
T 3hpa_A 96 MYQSLTRAVPAAQNAELFGWLTNL-YKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQRIG 174 (479)
T ss_dssp GGGGGSCSCTTTTTCCHHHHHHHH-HHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCCCTTCCHHHHHHHHHHHT
T ss_pred cchhcccccccCCCcchHHHHhhh-hhhhhhcCHHHHHHHHHHHHHHHHHhCCceecceeeeccchhhHHHHHHHHHHhc
Confidence 9888777654 355677887543 333445666666667777888999999999988542 23455566677788
Q ss_pred CeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCC-CCCCeEEEEeccccccCCHHHHHHH
Q 011766 162 LRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHA-ADGRIRIWFGIRQIMNATDRLLLET 240 (478)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 240 (478)
++.................... ..... .........+....+... ..........++.....+.+.+.++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (479)
T 3hpa_A 175 MRFHASRGAMSVGQRDGGLPPD-SVVER--------EPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDA 245 (479)
T ss_dssp CEEEEEEEECC-------------------------CHHHHHHHHHHHHHHCCCSTTCSEEEEEEESCTTTSCHHHHHHH
T ss_pred chhhhhhheeeccccccCCCch-hhhhh--------hhhHHHHHHHHHHHhhhhcccccceeEecccccccCCHHHHHHH
Confidence 8776554333222110000000 00000 000011233333443332 2344555567777788899999999
Q ss_pred HHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchh
Q 011766 241 RDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAM 320 (478)
Q Consensus 241 ~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~ 320 (478)
...+.+.++.+++|......+........+ ....+.....+....+..+.|+.++.+.++.++++.+.....+|.++.
T Consensus 246 ~~~a~~~g~~~~~h~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~ 323 (479)
T 3hpa_A 246 AVLAREYGVSLHTHLAENVNDIAYSREKFG--MTPAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFARTGTGVAHCPCSNM 323 (479)
T ss_dssp HHHHHHHTCEEEEEESCSHHHHHC---------CHHHHHHHTTCCSTTEEEEECTTCCHHHHHHHHHHTCEEEECHHHHH
T ss_pred HHHHHhcCCeEEeecccchHHHHHHHHHcC--CchHHHHhhhccccccceeeeeEecchhHHHHHHhcCCceeecccccc
Confidence 999999999999999876654433322222 235667777788888899999999999999999999999999998876
Q ss_pred hc-cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 011766 321 RM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLW 399 (478)
Q Consensus 321 ~~-~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl 399 (478)
.. .+..+.+.+.+.|+++++|||.........+..+++.+....... ....++|++++++++|.|||++||+
T Consensus 324 ~~~~~~~~~~~~~~~~~~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ls~~eal~~~T~~~A~~lgl 396 (479)
T 3hpa_A 324 RLASGIAPVKKMRLAGVPVGLGVDGSASNDGAQMVAEVRQALLLQRVG-------FGPDAMTAREALEIATLGGAKVLNR 396 (479)
T ss_dssp HTTCCCCCHHHHHHHTCCEEECCCCTTSSCCCCHHHHHHHHHHHHHHH-------HCTTSCCHHHHHHHTTHHHHHHHTC
T ss_pred ccccCccchhHHHhcCCcEEeeccccccCCCccHHHHHHHHHHHHhhh-------ccccCCCHHHHHHHHHHHHHHHhCC
Confidence 65 678899999999999999999877766666777666554433211 1234699999999999999999999
Q ss_pred CCCccccccCccccEEEEcCCC-CCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHHHHHH
Q 011766 400 DNDIGSLEAGKKADMVVVDPFS-WPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKL 474 (478)
Q Consensus 400 ~~~~G~l~~G~~ADlvv~d~~~-~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~ 474 (478)
+ ++|+|++||+|||||||.+. ....+..||++.+++.. ..+|.+|||||++||+||++++++.++++++.+++
T Consensus 397 ~-~~G~I~~G~~ADlvv~D~~~~~~~~~~~dp~~~lv~~~-~~~v~~tiV~G~~V~~dG~~~~~D~~~~~~~~~~~ 470 (479)
T 3hpa_A 397 D-DIGALKPGMAADFAAFDLRQPLFAGALHDPVAALVFCA-PSQTAYTVVNGKVVVREGRLATLDLPPVIERHNAL 470 (479)
T ss_dssp S-SSSSCSTTSBCCEEEEETTSGGGTTCTTSHHHHHHHSS-CCCCSEEEETTEEEEETTEECSSCHHHHHHHHHHH
T ss_pred C-CCccCCCCCcCCEEEEcCCCccccCCccCHHHHhhccC-CCCceEEEECCEEEEECCcCCCCCHHHHHHHHHHH
Confidence 5 58999999999999999984 44446789999887753 56899999999999999999999999999776654
No 11
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=1.3e-47 Score=379.43 Aligned_cols=417 Identities=21% Similarity=0.293 Sum_probs=298.6
Q ss_pred CccceeEEEecEEEeeC-CCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhh
Q 011766 16 GSSSTMILHNAVIVTMD-KESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA 94 (478)
Q Consensus 16 ~~~~~~~i~n~~I~t~d-~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~ 94 (478)
..+.+++|+|++|++++ +...++.+++|+|+||||++|++.... +..++++||++|++|+|||||+|+|+....+
T Consensus 6 ~~m~~~li~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~ig~~~~~----~~~~~~viD~~G~~v~PGlID~H~H~~~~~~ 81 (439)
T 2i9u_A 6 KDINLKIFKGNLIFTKTSDKFTIMKDSYIVVIDGKIASVSSNLPD----KYKGNPIIDFRNNIIIPGMNDLHAHASQYKN 81 (439)
T ss_dssp ---CEEEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEESSCCG----GGTTSCEEEEEEEEEEECEEEEEEEGGGGGG
T ss_pred CCcccEEEEeeEEEecCCccceEEeccEEEEECCEEEEecccccc----cCCCceEEcCCCeEEEecceecccccchHhh
Confidence 34568899999999876 223456788999999999999964321 1124579999999999999999999988776
Q ss_pred ccccCCCCchHHhhhccccccCCC-ChHHHHHHHHHHHHHHHhcCcceeecCCccCH---HHHHHHHHHhCCeEEEeccc
Q 011766 95 KGIADDVDLMTWLHDRIWPYESNM-TEEDSYISTLLCGIELIHSGVTCFAEAGGQHV---SEMAKAVELLGLRACLVQST 170 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~---~~~~~~~~~~g~~~~~~~~~ 170 (478)
++...+.++.+|+....|+.+..+ +.++.+........+++++||||+++++.... ....+.....|++.+.+...
T Consensus 82 ~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~ 161 (439)
T 2i9u_A 82 LGIGMDKELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNGTTRVALFATLHKDSTIELFNMLIKSGIGAYVGKVN 161 (439)
T ss_dssp TTCCCSSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSCHHHHHHHHHHHHHHTCEEEEECEE
T ss_pred hCCcCCCCHHHHHHhcccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEccccccchHHHHHHHHHHcCCEEEEEeee
Confidence 665556678888876555443333 33444445555678899999999999765443 34556667788887654433
Q ss_pred ccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCc
Q 011766 171 MDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTG 250 (478)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~ 250 (478)
+... .+..+. ....... .+..+.++++... .+.++..+.++..+.++++.+.++++.|++.|++
T Consensus 162 ~~~~--~p~~~~-~~~~~~~------------~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~ 225 (439)
T 2i9u_A 162 MDYN--CPDYLT-ENYITSL------------NDTEEIILKYKDK-SNIVKPIITPRFVPSCSNELMDGLGKLSYKYRLP 225 (439)
T ss_dssp CCSS--CCTTSC-CCHHHHH------------HHHHHHHHHHTTT-CSSEEECBEECCGGGCCHHHHHHHHHHHHHHTCC
T ss_pred cccc--CCcccc-hhHHHHH------------HHHHHHHHHHhCC-CCceEEEEecCCcCcCCHHHHHHHHHHHHhcCCc
Confidence 3221 111000 0000011 1345555555432 3456665666666677899999999999999999
Q ss_pred eeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCC-CCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCCcH
Q 011766 251 IHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQ-NNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPI 328 (478)
Q Consensus 251 v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~ 328 (478)
+++|+.+...+........+.....++.+...+... .+.++.|+.++++++++++++.|+.+++||.++... .+.+|+
T Consensus 226 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~H~~~~~~~~~~~l~~~g~~~~~~p~~~~~l~~~~~~~ 305 (439)
T 2i9u_A 226 VQSHLSENLDEIAVVKSLHKKSNFYGEVYDKFGLFGNTPTLMAHCIHSSKEEINLIKRNNVTIVHCPTSNFNLGSGMMPV 305 (439)
T ss_dssp EEEEESCCHHHHHHHHHHCTTCSSHHHHHHHTTCSSSSCEEEEECCSCCHHHHHHHHHTTCEEEECHHHHHHTTCCCCCH
T ss_pred EEEeecCChHHHHHHHHHhCCCCCHHHHHHHcCCCCCCCeEEEEEecCCHHHHHHHHHcCCEEEECccchhhcccccCCH
Confidence 999998876555555544443223566677778777 788999999999999999999999999999988765 467899
Q ss_pred HHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcccccc
Q 011766 329 KEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEA 408 (478)
Q Consensus 329 ~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~ 408 (478)
+.+++.|+++++|||+++ ....+++.+++.+........... .....++|++++++++|.|||+++| ++|+|++
T Consensus 306 ~~~~~~Gv~~~lgtD~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ls~~~al~~~T~~~A~~lg---~~Gsl~~ 379 (439)
T 2i9u_A 306 RKYLNLGINVVLGSDISA-GHTCSLFKVIAYAIQNSKIKWQES--GKKDMFLSTSEAFYMATKKGGSFFG---KVGSFEE 379 (439)
T ss_dssp HHHHHTTCEEEECCCBTT-BCCSCHHHHHHHHHHHHHHHHHHT--TSCSCCCCHHHHHHHHTHHHHTTTS---SCSSCST
T ss_pred HHHHHCCCcEEEecCCCC-CCCcCHHHHHHHHHHHhccccccc--cCCCCCCCHHHHHHHHHHHHHHHhc---cCCccCC
Confidence 999999999999999866 345789998887665432110000 1133579999999999999999999 4799999
Q ss_pred CccccEEEEcCCCCCCC--CcCChhhhhhhccCCCCeeEEEEccEEEEECCe
Q 011766 409 GKKADMVVVDPFSWPMV--PVHDRITSLVYCMRTENVVSVMCNGQWVMKNKK 458 (478)
Q Consensus 409 G~~ADlvv~d~~~~~~~--~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~ 458 (478)
||+|||||+|.++++.. +..||+..+++.....+|..||++|++||++++
T Consensus 380 G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~~~ 431 (439)
T 2i9u_A 380 GYDFDALVINDSNLYPEDYDLTERLERFIYLGDDRNIMKRYVCGNEIFGPKF 431 (439)
T ss_dssp TCBCCEEEECCTTSCGGGSCHHHHHHHHHHHCCGGGEEEEEETTEEEC----
T ss_pred CCccCEEEEeCCCccccCCCccCHHHHheecCCCCCeeEEEECCEEEeeCCC
Confidence 99999999999976554 345666777666666799999999999998775
No 12
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=4.6e-47 Score=378.32 Aligned_cols=418 Identities=21% Similarity=0.319 Sum_probs=304.4
Q ss_pred eeEEEecEEEeeCCC-----------CceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccc
Q 011766 20 TMILHNAVIVTMDKE-----------SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVH 88 (478)
Q Consensus 20 ~~~i~n~~I~t~d~~-----------~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H 88 (478)
.++|++|+|+++.++ ..++.+++|+|+||||++||+..+.+..+ .++++||++|++|+|||||+|+|
T Consensus 4 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~V~I~~G~I~~Vg~~~~~~~~~--~~~~viD~~G~~v~PG~ID~H~H 81 (475)
T 2ood_A 4 TTVGIRGTFFDFVDDPWKHIGNEQAAARFHQDGLMVVTDGVIKAFGPYEKIAAAH--PGVEITHIKDRIIVPGFIDGHIH 81 (475)
T ss_dssp CEEEEEEEEEEESSCGGGSTTCGGGGEEEEEEEEEEEESSBEEEEEEHHHHHHHS--TTCEEEEEEEEEEEECEEEEEEE
T ss_pred cceEEEEEEEecCCccccccccCCCcceEEECCEEEEECCEEEEEeChhhhcccc--CCCeEEeCCCcEEecceecCccc
Confidence 457889999987541 23567899999999999999754332111 35689999999999999999999
Q ss_pred cchhhhccccCCCCchHHhhhccccccCCC-ChHHHHHHHHHHHHHHHhcCcceeecCCccCH---HHHHHHHHHhCCeE
Q 011766 89 TSQQLAKGIADDVDLMTWLHDRIWPYESNM-TEEDSYISTLLCGIELIHSGVTCFAEAGGQHV---SEMAKAVELLGLRA 164 (478)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~---~~~~~~~~~~g~~~ 164 (478)
+.+..+++.. +.++.+|+....|+.+..+ +.++.+........+++++||||+++++.... ....+..+..|++.
T Consensus 82 l~~~~~~g~~-~~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~g~r~ 160 (475)
T 2ood_A 82 LPQTRVLGAY-GEQLLPWLQKSIYPEEIKYKDRNYAREGVKRFLDALLAAGTTTCQAFTSSSPVATEELFEEASRRNMRV 160 (475)
T ss_dssp GGGTTCTTCC-SCCHHHHHHHHTHHHHGGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSSHHHHHHHHHHHHHHTCCE
T ss_pred HHhHhhcCCC-CCCHHHHHHHhccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEecccCchhHHHHHHHHHHcCCeE
Confidence 9877665543 3457788877665544433 34445555567788999999999999764433 34456667788887
Q ss_pred EEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHH
Q 011766 165 CLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMA 244 (478)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a 244 (478)
..+......+ .+..+ ......... ...++++++.. .+.++..+.++..+.++++.+.++++.+
T Consensus 161 ~~g~~~~~~~--~~~~~-~~~~~~~~~------------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~e~l~~~~~~a 223 (475)
T 2ood_A 161 IAGLTGIDRN--APAEF-IDTPENFYR------------DSKRLIAQYHD--KGRNLYAITPRFAFGASPELLKACQRLK 223 (475)
T ss_dssp EECCEECCSS--SCTTT-CCCHHHHHH------------HHHHHHHHHTT--BTTEEEEEEECBGGGCCHHHHHHHHHHH
T ss_pred EEEeeecccC--CCccc-ccCHHHHHH------------HHHHHHHHhcc--CCceEEEEeccccCcCCHHHHHHHHHHH
Confidence 6443332211 11100 000001111 34455555533 3457766778888889999999999999
Q ss_pred HHc-CCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-
Q 011766 245 REF-KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM- 322 (478)
Q Consensus 245 ~~~-~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~- 322 (478)
++. |+++++|+.+...+.......++.....++.++..+.+..+.++.|+.++++++++++++.|+.+++||.++..+
T Consensus 224 ~~~~g~~v~~H~~e~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~i~H~~~~~~~~i~~~~~~g~~~~~~P~~~~~l~ 303 (475)
T 2ood_A 224 HEHPDCWVNTHISENPAECSGVLVEHPDCQDYLGVYEKFDLVGPKFSGGHGVYLSNNEFRRMSKKGAAVVFCPCSNLFLG 303 (475)
T ss_dssp HHCTTSEEEEECSCCHHHHHHHHHHCTTCSSHHHHHHTTTCCSTTEEEECCTTCCHHHHHHHHHHTCEEEECHHHHHHTT
T ss_pred HhCCCCcEEEeeCCChHHHHHHHHHcCCCccHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHHcCCEEEEChhhhhhcc
Confidence 999 999999999876655555554443344677788888888888999999999999999999999999999988765
Q ss_pred cCCCcHHHHHHCCCc--EEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCC----------CCCCCCCHHHHHHHHh
Q 011766 323 LGFAPIKEMLHADIC--VSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGT----------TDPAALPAETVLRMAT 390 (478)
Q Consensus 323 ~~~~~~~~~~~~gv~--v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ls~~~al~~~T 390 (478)
.+.+|++.+++.|++ +++|||+++. .+.+++.+++.+............+. ..+.++|++++++++|
T Consensus 304 ~~~~~~~~~~~~Gv~~~~~lgTD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ls~~~al~~~T 382 (475)
T 2ood_A 304 SGLFRLGRATDPEHRVKMSFGTDVGGG-NRFSMISVLDDAYKVGMCNNTLLDGSIDPSRKDLAEAERNKLSPYRGFWSVT 382 (475)
T ss_dssp CCCCCHHHHTCTTSCCEEEECCCBTTB-SCCCHHHHHHHHHHHHHHHHHHSSSSSCGGGCCHHHHHHTCCCHHHHHHHTT
T ss_pred cCcCCHHHHHhCCCCCcEEEEccCCCC-CCcCHHHHHHHHHHHhcccchhccCCcccccccccccccCCCCHHHHHHHHH
Confidence 678999999999999 9999998663 34678888877654322000000000 0014699999999999
Q ss_pred HHHHHHcCCCCCccccccCccccEEEEcCCCCCCCC------------------cCChhhhhhhccCCCCeeEEEEccEE
Q 011766 391 INGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP------------------VHDRITSLVYCMRTENVVSVMCNGQW 452 (478)
Q Consensus 391 ~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~------------------~~d~~~~~~~~~~~~~v~~v~v~G~~ 452 (478)
.|||+++|+++++|+|++||+|||||+|.+++...+ ..+|+..+++.....+|..||++|++
T Consensus 383 ~~~A~~lgl~~~~GsL~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~s~~~~~~~~~p~~~~~~~~~~~~V~~t~v~G~~ 462 (475)
T 2ood_A 383 LGGAEGLYIDDKLGNFEPGKEADFVALDPNGGQLAQPWHQSLIADGAGPRTVDEAASMLFAVMMVGDDRCVDETWVMGKR 462 (475)
T ss_dssp HHHHHHTTCTTTSSSCCTTSBCCEEEECTTCSSTTHHHHHTTC--CCSCCSHHHHHHHHHHHHHHCCGGGEEEEEETTEE
T ss_pred HHHHHHhCCCCCceeeCCCCccCEEEEeCCCccccccccccccccccccccccchhhHHHHHHhhCCCCCeeEEEECCEE
Confidence 999999999888999999999999999999766432 23467777776677899999999999
Q ss_pred EEECCe
Q 011766 453 VMKNKK 458 (478)
Q Consensus 453 v~~~g~ 458 (478)
||++.+
T Consensus 463 v~~~~~ 468 (475)
T 2ood_A 463 LYKKSE 468 (475)
T ss_dssp EEECC-
T ss_pred EEECCC
Confidence 999876
No 13
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A
Probab=100.00 E-value=1.8e-47 Score=374.56 Aligned_cols=394 Identities=27% Similarity=0.422 Sum_probs=299.5
Q ss_pred eEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCC
Q 011766 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (478)
Q Consensus 21 ~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~ 100 (478)
++|+|++|+|+++. . ..+++|+|+||||++|++.. .+++ ||++|++|+|||||+|+|+.....++...+
T Consensus 1 ~li~n~~v~~~~~~-~-~~~~~v~I~~g~I~~vg~~~--------~~~~-iD~~g~~v~PG~ID~H~H~~~~~~~~~~~~ 69 (406)
T 1p1m_A 1 MIIGNCLILKDFSS-E-PFWGAVEIENGTIKRVLQGE--------VKVD-LDLSGKLVMPALFNTHTHAPMTLLRGVAED 69 (406)
T ss_dssp CEEEEEEECCSTTS-C-CEEEEEEEETTEEEEEEESS--------CCCS-EECTTEEEEECEEEEEECGGGGGGTTSSCS
T ss_pred CEEEccEEEecCcc-c-cccceEEEECCEEEEeeCCC--------Ccce-ecCCCcEEeecccchhhccchhhhccccCC
Confidence 47999999987653 2 56789999999999999742 1346 999999999999999999988777766666
Q ss_pred CCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCHHHHHHHHHHhCCeEEEecccccCCCCCCCc
Q 011766 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (478)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 180 (478)
.++.+|+....|+.....+.++.+........+++++||||+++++. ......+.....|++.+.....++.+.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~-~~~~~~~~~~~~g~r~~~~~~~~~~~~----- 143 (406)
T 1p1m_A 70 LSFEEWLFSKVLPIEDRLTEKMAYYGTILAQMEMARHGIAGFVDMYF-HEEWIAKAVRDFGMRALLTRGLVDSNG----- 143 (406)
T ss_dssp CCHHHHHHTTHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEEEEES-SHHHHHHHHHHHCCEEEEEEEECCBTT-----
T ss_pred CCHHHHHHhhhccchhcCCHHHHHHHHHHHHHHHHhcCcEEEEechh-CHHHHHHHHHHcCCEEEEEcccccCCC-----
Confidence 77889998888877777777777777777778899999999999753 345556666778888866544432210
Q ss_pred ccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCChh
Q 011766 181 WAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 260 (478)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~ 260 (478)
.....+. ...+.++.+.... +.++....++..+.++++.+.++++.|++.|+++++|+.+...
T Consensus 144 ----~~~~~~~------------~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~ 206 (406)
T 1p1m_A 144 ----DDGGRLE------------ENLKLYNEWNGFE-GRIFVGFGPHSPYLCSEEYLKRVFDTAKSLNAPVTIHLYETSK 206 (406)
T ss_dssp ----BCTTHHH------------HHHHHHHHHTTGG-GTEEEEEEECCTTTSCHHHHHHHHHHHHHTTCCEEEEESCSTT
T ss_pred ----CHHHHHH------------HHHHHHHHhhCCC-CcEEEEEecCccCcCCHHHHHHHHHHHHHCCCcEEEEcCCCch
Confidence 0011111 2334455543322 4566666777777789999999999999999999999986533
Q ss_pred hhHHHhh--hcCCCCchHHHHhhhCCCCCCeeeeeec---cCChhHHHHHHhcCCeEEECccchhhc-cCCCcHHHHHHC
Q 011766 261 ENQVVMD--TRKVDHGTVTFLDKIEFLQNNLLSAHTV---WVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHA 334 (478)
Q Consensus 261 ~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~i~h~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~ 334 (478)
....... ..+ +...+... ..+.|+. +++++++++++ ..||..+++. .+..+++.+++.
T Consensus 207 ~~~~~~~~~~~g--------~~~~g~~~--~~~~H~~~~~~~~~~~~~~~~------~~~p~~~~~~~~~~~~~~~~~~~ 270 (406)
T 1p1m_A 207 EEYDLEDILNIG--------LKEVKTIA--AHCVHLPERYFGVLKDIPFFV------SHNPASNLKLGNGIAPVQRMIEH 270 (406)
T ss_dssp CCCCTHHHHTTT--------TTTSCEEE--EECTTCCGGGTTTTTTSSEEE------EECHHHHHHTTCCCCCHHHHHHT
T ss_pred HHHHHHHhhhCC--------HhHcCcce--eEeeeccCcccCCHHHHHHHH------HhCcHHHhhcCCCcCcHHHHHhC
Confidence 2221111 000 11122221 5789999 99988876544 7888877665 567899999999
Q ss_pred CCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccE
Q 011766 335 DICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADM 414 (478)
Q Consensus 335 gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADl 414 (478)
|+++++|||+++.+...+++.+++.+....... ...++|++++++++|.|||+++|+++ |+|++|++|||
T Consensus 271 Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ls~~~al~~~T~~~A~~lgl~~--G~l~~G~~ADl 340 (406)
T 1p1m_A 271 GMKVTLGTDGAASNNSLNLFFEMRLASLLQKAQ--------NPRNLDVNTCLKMVTYDGAQAMGFKS--GKIEEGWNADL 340 (406)
T ss_dssp TCEEEECCCCTTTTSCCCHHHHHHHHHHHHHTT--------CTTSSCHHHHHHHHTHHHHHHHTCSC--SSCCTTSBCCE
T ss_pred CCeEEEECCCCcCCCCCCHHHHHHHHHHHhccc--------CCCCCCHHHHHHHHHHHHHHHhCCCC--cccCCCCcccE
Confidence 999999999987655678999988877654321 13469999999999999999999964 99999999999
Q ss_pred EEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHHHHHHh
Q 011766 415 VVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLL 475 (478)
Q Consensus 415 vv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~ 475 (478)
||+|.++++..|..||+..+++.....+|..||++|++|| +|+++..+.+++.++.++..
T Consensus 341 vv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~-~g~~~~~d~~~~~~~~~~~~ 400 (406)
T 1p1m_A 341 VVIDLDLPEMFPVQNIKNHLVHAFSGEVFATMVAGKWIYF-DGEYPTIDSEEVKRELARIE 400 (406)
T ss_dssp EEEECCSGGGCSGGGHHHHHHHTCCSCCSEEEETTEEEEE-TTBCTTSCHHHHHHHHHHHH
T ss_pred EEEeCCccccCCccChHHHheEecCCCCceEEEECCEEEE-CCeeCCCCHHHHHHHHHHHH
Confidence 9999998777788888888877777789999999999999 99999999999998877654
No 14
>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP}
Probab=100.00 E-value=6e-48 Score=379.00 Aligned_cols=400 Identities=19% Similarity=0.250 Sum_probs=304.8
Q ss_pred eEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCC
Q 011766 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (478)
Q Consensus 21 ~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~ 100 (478)
++|+|++|+++++ ++++++|+| ||+|++||+..+.+..+ .++++||++|++|+|||||+|+|+.++.+++....
T Consensus 2 ~~i~~~~v~~~~~---~~~~~~v~i-~g~I~~Vg~~~~~~~~~--~~~~vid~~g~~v~PGlId~H~H~~~~~~rg~~~~ 75 (427)
T 3v7p_A 2 RIIKPFAILTPQT---IIQDKAVAF-DKKIEAIDTVENLIKKY--PNAAVEHDENSLLLPGFANPHLHLEFSANKATLQY 75 (427)
T ss_dssp EEEEEEEEECSSS---EEESCEEEE-SSBEEEEECHHHHHHHC--TTSEEEEEEEEEEEECEEEEEECGGGTTCSSCSCC
T ss_pred EEEECCEEEcCCC---EEeCcEEEE-CCEEEEecChhhhcccc--CCceEEeCCCCEEecCEeecccCcchhhccccccc
Confidence 5799999998763 778999999 99999999866543322 35689999999999999999999999999988888
Q ss_pred CCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCHHHHHHHHHHhCCeEEEecccccCCCCCCCc
Q 011766 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (478)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 180 (478)
.++.+|+....++.+. +.+++.+........+++++|||++.++.... ...+.....|++.......+... ..
T Consensus 76 ~~l~~wl~~~~~~~~~-~~~~~~~~~~~~~~~e~l~~GvTtv~d~~~~~--~~~~a~~~~Gir~~~~~~~~~~~----~~ 148 (427)
T 3v7p_A 76 GDFIPWLYSVIRHRED-LLPLCDGACLEQTLSSIIQTGTTAIGAISSYG--EDLQACIDSALKVVYFNEVIGSN----AA 148 (427)
T ss_dssp SSHHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHTTEEEEEEEESSS--TTHHHHHHBSSEEEEEEEECBCC----GG
T ss_pred CCHHHHHHHHHHhHHh-cCHHHHHHHHHHHHHHHHHhCCEEEEEecCcH--HHHHHHHhcCCeEEEeccccCCC----hh
Confidence 8999999887766543 34444566667788899999999999975432 22567888999987665443221 10
Q ss_pred ccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCChh
Q 011766 181 WAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 260 (478)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~ 260 (478)
. ...... +..+.++.......+.++..++++..++++++.+++++++|++.|+++++|+.+...
T Consensus 149 ~----~~~~~~------------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~E~~~ 212 (427)
T 3v7p_A 149 T----ADVMYA------------SFLERFHQSKKHENERFKAAVAIHSPYSVHYILAKRALDIAKKYGSLVSVHFMESRA 212 (427)
T ss_dssp G----HHHHHH------------HHHHHHHHHHTTCBTTEEEEEEECCTTTBCHHHHHHHHHHHHHHTCCEEEEESCSHH
T ss_pred h----hhHHHH------------HHHHHHHHhhhccCCceEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeCCCHH
Confidence 0 000011 233334444444567788889999999999999999999999999999999999888
Q ss_pred hhHHHhhhcCC----------CCchHH-HHhhhCC-CCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc-cCCCc
Q 011766 261 ENQVVMDTRKV----------DHGTVT-FLDKIEF-LQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAP 327 (478)
Q Consensus 261 ~~~~~~~~~~~----------~~~~~~-~l~~~~~-~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~ 327 (478)
+.+.+....+. ...+.. .....+. +..+.++.|+.++++++++++++.++.+++||.+++.. .+.+|
T Consensus 213 e~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~H~~~~~~~~~~~l~~~g~~~~~~p~s~~~~~~~~~~ 292 (427)
T 3v7p_A 213 EREWLDKGSGEFAKFFKEFLNQTRPVNDTKSFLELFKELHTLFVHMVWANEEEIQTIASYNAHIIHCPISNRLLGNGVLD 292 (427)
T ss_dssp HHHHHHHSCSHHHHHHHHHTCCCSCSSCHHHHHHTTTTSEEEEEECTTCCHHHHHHHHHSEEEEEECHHHHHHTTCCCCC
T ss_pred HHHHHHHhcCcchhhhhhhccCCCcccCHHHHHhhhcCCCEEEEECCCCCHHHHHHHHHcCCEEEECHHHHHHhcCCCCC
Confidence 77665543320 001111 1111233 56788999999999999999999999999999999877 67889
Q ss_pred HHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccc
Q 011766 328 IKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLE 407 (478)
Q Consensus 328 ~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~ 407 (478)
++.+ +|+++++|||+...+++.+++.+++.+...... ....++++++++++|.+||+++|++ +|+|+
T Consensus 293 ~~~~--~Gv~v~lgtD~~~~~~~~~~~~~~~~a~~~~~~---------~~~~~~~~~~~~~~t~~~a~~~g~~--~g~l~ 359 (427)
T 3v7p_A 293 LEKI--KSIPYAIATDGLSSNYSLNMYEELKAALFVHPN---------KEATTFAKELIIRATKAGYDALGFE--GGEIA 359 (427)
T ss_dssp TTTT--TTSCEEECCCCTTSCSCCCHHHHHHHHHHHSTT---------SCHHHHHHHHHHHHTHHHHHHHTCS--CSSCC
T ss_pred HHHH--CCCeEEEeCCCCCCCCCCCHHHHHHHHHHhccC---------CCcccCHHHHHHHHHHHHHHHhCCC--CceeC
Confidence 9988 999999999987666788999999988765421 1224678999999999999999994 79999
Q ss_pred cCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHH
Q 011766 408 AGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRG 465 (478)
Q Consensus 408 ~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~ 465 (478)
+|+.|||||+|.+.....+..+|.+.+.. ..+|..||++|++||++|+++.....
T Consensus 360 ~G~~Ad~~~~d~~~~~~~~~~~~~~~~~~---~~~v~~v~v~G~~v~~~g~~~~~~~~ 414 (427)
T 3v7p_A 360 VGKDADMQLIDLPEGLTNVEDLYLHVILH---TTKPKKVYIQGEEHVREAENLYFQSH 414 (427)
T ss_dssp TTSBCCEEEEECCTTCCCGGGHHHHHHHH---CSSCSEEEETTEEEEC---CCCBC--
T ss_pred CCCccCEEEEcCCCccCCCccchHHHhcc---cCCccEEEECCEEEEECCcccCCccc
Confidence 99999999999987666666666665443 47899999999999999999876654
No 15
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*
Probab=100.00 E-value=3.1e-47 Score=377.26 Aligned_cols=419 Identities=19% Similarity=0.236 Sum_probs=317.3
Q ss_pred EEecEEEeeCCCCceeecceEEE-ECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccC--
Q 011766 23 LHNAVIVTMDKESRVFRNGGVFV-VQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD-- 99 (478)
Q Consensus 23 i~n~~I~t~d~~~~~~~~~~v~I-~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~-- 99 (478)
+..+++++++ .++++++|+| +||+|++|++..+ ...++|++| +|+|||||+|+|+.++.+++...
T Consensus 4 ~~~~~~~~~~---~~~~~~~v~i~~~g~I~~ig~~~~--------~~~~~d~~g-~v~PGfId~H~H~~~~~~rg~~~~~ 71 (453)
T 3mdu_A 4 IFAERALLPE---GWARNVRFEISADGVLAEIRPDAN--------ADGAERLGG-AVLPGMPNLHSHAFQRAMAGLAEVA 71 (453)
T ss_dssp EEEEEEEETT---EEEEEEEEEECTTSBEEEEESSCC--------CTTSEECSS-CEEECEEEEEECGGGGGGTTTTCCC
T ss_pred cchhheecCC---ceecCeEEEEecCCEEEEecCCCC--------cccccccCC-cccccceecccchHHHhhccccccc
Confidence 4456667543 4778999999 8999999998643 224679999 99999999999999999988764
Q ss_pred ---CCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC--------------HHHHHHHHHHhCC
Q 011766 100 ---DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------------VSEMAKAVELLGL 162 (478)
Q Consensus 100 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~--------------~~~~~~~~~~~g~ 162 (478)
+.++.+|+.. +|+....+++++.+........+++++||||+.++...+ .....+.....|+
T Consensus 72 ~~~~~~l~~wl~~-~~~~~~~~~~e~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~~~~Gi 150 (453)
T 3mdu_A 72 GNPNDSFWTWREL-MYRMVARLSPEQIEVIACQLYIEMLKAGYTAVAEFHYVHHDLDGRSYADPAELSLRISRAASAAGI 150 (453)
T ss_dssp SSTTCCHHHHHHH-HHHHHTTCCHHHHHHHHHHHHHHHHHHTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHHHHHTC
T ss_pred cCCCCcHHHHHHH-HhhhhhhCCHHHHHHHHHHHHHHHHHcCCcEEEEeeEeccccccccccchhhHHHHHHHHHHHhCC
Confidence 4678899754 577788889999999999999999999999999852211 3466778889999
Q ss_pred eEEEecccccCCCC--CCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHH
Q 011766 163 RACLVQSTMDCGEG--LPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLET 240 (478)
Q Consensus 163 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 240 (478)
+.......++.... .++............ .......+....+... +. ...++++..+.++++.++++
T Consensus 151 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~--~~-~~~~~p~~~~~~~~e~l~~~ 219 (453)
T 3mdu_A 151 GLTLLPVLYSHAGFGGQPASEGQRRFINGSE--------AYLELLQRLRAPLEAA--GH-SLGLCFHSLRAVTPQQIATV 219 (453)
T ss_dssp EEEEEECBCCBSSTTTCBCCGGGGGGCCCHH--------HHHHHHHHHHHHHHHH--TC-EECEEEEETTTSCHHHHHHH
T ss_pred eEEEecchhccccccCCCCchhhhhccCCHH--------HHHHHHHHHHHHhhcC--CC-eEEEecCCCCcCCHHHHHHH
Confidence 99877655543211 111100000000000 0000112222222111 22 55578888899999999999
Q ss_pred HHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchh
Q 011766 241 RDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAM 320 (478)
Q Consensus 241 ~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~ 320 (478)
+++|+ .|+++++|+.+...+...+....+. ..++.+...+.+..+.++.||.++++++++++++.|+.+++||.+++
T Consensus 220 ~~~A~-~g~~v~~H~~e~~~e~~~~~~~~g~--~~v~~l~~~g~~~~~~~~~H~~~~~~~~i~~la~~g~~v~~~P~sn~ 296 (453)
T 3mdu_A 220 LAAGH-DDLPVHIHIAEQQKEVDDCQAWSGR--RPLQWLYENVAVDQRWCLVHATHADPAEVAAMARSGAVAGLCLSTEA 296 (453)
T ss_dssp HTSSC-TTSCEEEEESCSHHHHHHHHHHHSS--CHHHHHHHHSCCCTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHH
T ss_pred HHHHh-cCCCEEEEeCCCHHHHHHHHHHhCC--CHHHHHHHcCCCCCCeEEEEcCCCCHHHHHHHHHcCCEEEECchhHh
Confidence 99999 9999999999988877776665543 36788888899999999999999999999999999999999999998
Q ss_pred hc-cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccC-CCCCCCCCCHHHHHHHHhHHHHHHcC
Q 011766 321 RM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFAN-GTTDPAALPAETVLRMATINGAKSVL 398 (478)
Q Consensus 321 ~~-~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ls~~~al~~~T~~pA~~lg 398 (478)
.+ .+..|++.++++|+++++|||++. +.+++.+|+.+....+....... .+..+++++++++++++|.+||+++|
T Consensus 297 ~lg~g~~p~~~~~~~Gv~v~lgtD~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~~ 373 (453)
T 3mdu_A 297 NLGDGIFPATDFLAQGGRLGIGSDSHV---SLSVVEELRWLEYGQRLRDRKRNRLYRDDQPMIGRTLYDAALAGGAQALG 373 (453)
T ss_dssp HTTCCCCCHHHHHHTTCEEEECCBTCS---CCCHHHHHHHHHHHHHHHHTCSCCSCBTTBCCHHHHHHHHHHHHHHHHHT
T ss_pred hcCCCCCCHHHHHHCCCEEEEECCCCC---CCCHHHHHHHHHHHHhhhccCCccccCcccCCCHHHHHHHHHHHHHHHhC
Confidence 77 678999999999999999999643 46899988877654322111100 11233479999999999999999999
Q ss_pred CCCCccccccCccccEEEEcCCCCCCC--CcCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHHHHHHh
Q 011766 399 WDNDIGSLEAGKKADMVVVDPFSWPMV--PVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDKLL 475 (478)
Q Consensus 399 l~~~~G~l~~G~~ADlvv~d~~~~~~~--~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~~~ 475 (478)
+ ++|+|++|+.|||||+|.+..... +..|+++.+++.....+|..||++|++||++|+++ +.+++.+.+++..
T Consensus 374 ~--~~G~l~~G~~AD~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~--~~~~i~~~~~~~~ 448 (453)
T 3mdu_A 374 Q--PIGSLAVGRRADLLVLDGNDPYLASAEGDALLNRWLFAGGDRQVRDVMVAGRWVVRDGRHA--GEERSARAFVQVL 448 (453)
T ss_dssp S--SCSSCCTTSBCCEEEECTTCHHHHTCCHHHHHHHHHHHCCGGGEEEEEETTEEEEBTTBCT--THHHHHHHHHHHH
T ss_pred C--CCCccCCCCcCCEEEEeCCCccccCCCccChHHHheeeCCCCCeeEEEECCEEEEECCccC--CHHHHHHHHHHHH
Confidence 9 579999999999999999754322 55678888888777789999999999999999984 7788887777654
No 16
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A
Probab=100.00 E-value=2.1e-42 Score=341.16 Aligned_cols=378 Identities=15% Similarity=0.182 Sum_probs=259.7
Q ss_pred cceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccc
Q 011766 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~ 97 (478)
+++++|+|++|++++ .+++|+|+||||++||+..+.+ ..++++||++|++|+|||||+|+|+....+++.
T Consensus 7 ~~~~li~n~~v~~~~------~~~~v~I~~g~I~~vg~~~~~~----~~~~~viD~~G~~v~PGlID~H~Hl~~~~~~~~ 76 (430)
T 1ra0_A 7 NALQTIINARLPGEE------GLWQIHLQDGKISAIDAQSGVM----PITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQ 76 (430)
T ss_dssp -CCCEEEEEBCTTCC------SEEEEEEETTEEEEEEEESSCC----CCCTTEEECTTCEEESCEEEEEECTTTTTCTTS
T ss_pred CCcEEEEeeEecCCC------ceeEEEEECCEEEEeecCCCCC----CCCcceEccCCCEecccccccccchhhhhhcCC
Confidence 467899999999642 4569999999999999754321 134689999999999999999999987665554
Q ss_pred cC---CCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc-C-----HHHHHHHHHHhCCeEEEec
Q 011766 98 AD---DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-H-----VSEMAKAVELLGLRACLVQ 168 (478)
Q Consensus 98 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~-~-----~~~~~~~~~~~g~~~~~~~ 168 (478)
.. +.++.+|+.. .++....++.++.+........+++++||||+++++.. . .....+..+..........
T Consensus 77 ~~~~~~~~~~~~l~~-~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (430)
T 1ra0_A 77 PNWNQSGTLFEGIER-WAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQI 155 (430)
T ss_dssp SSCCSSCCHHHHHHH-HHHHHTTCCHHHHHHHHHHHHHHHHHTTEEEEEEEEECCSTTCHHHHHHHHHHHHHTTTCEEEE
T ss_pred CcCCCCCCHHHHHHH-hHHhhhhcCHHHHHHHHHHHHHHHHhcCccEEeeccccCChHHHHHHHHHHHHHhhhhhEEEEE
Confidence 32 4567788754 34455666777777777778889999999999986532 1 1222222222121111110
Q ss_pred ccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEecccccc--CCHHHHHHHHHHHHH
Q 011766 169 STMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMN--ATDRLLLETRDMARE 246 (478)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~a~~ 246 (478)
..+.. .+. + . .. ...+.++++...+.+.+. ..++..+. .+++.+.++++.|++
T Consensus 156 ~~~~~-~~~---~----~---~~------------~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~l~~~~~~A~~ 210 (430)
T 1ra0_A 156 VAFPQ-EGI---L----S---YP------------NGEALLEEALRLGADVVG--AIPHFEFTREYGVESLHKTFALAQK 210 (430)
T ss_dssp EEECT-TCS---S----S---ST------------THHHHHHHHHHTTCSEEC--CCGGGSSSHHHHHHHHHHHHHHHHH
T ss_pred EecCC-ccc---c----c---Cc------------hHHHHHHHHHHhCCCeEe--eeecccccccccHHHHHHHHHHHHH
Confidence 00000 000 0 0 00 122223333222223222 22344444 678899999999999
Q ss_pred cCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChh-------HHHHHHhcCCeEEECccch
Q 011766 247 FKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHT-------EIGLLSRAGVKVSHCPASA 319 (478)
Q Consensus 247 ~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~-------~~~~~~~~~~~~~~~p~~~ 319 (478)
.|+++++|+.+.......... ..++.+...+. +.+..+.|+.+++++ +++++++.|+.+++||.++
T Consensus 211 ~g~~v~~H~~e~~~~~~~~~~------~~~~~~~~~g~-~~~~~i~H~~~~~~~~~~~~~~~i~~~~~~gv~v~~~p~~~ 283 (430)
T 1ra0_A 211 YDRLIDVHCDEIDDEQSRFVE------TVAALAHHEGM-GARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVN 283 (430)
T ss_dssp HTCEEEEEECCSSCTTCCHHH------HHHHHHHHHTC-GGGEEEEECGGGGGSCHHHHHHHHHHHHHHTCEEEECHHHH
T ss_pred cCCCEEEEECCCCchhHHHHH------HHHHHHHHhCC-CCCEEEEeccccccCChHhHHHHHHHHHHcCCEEEECchhh
Confidence 999999999765432211111 12344555554 677889999999875 8999999999999999876
Q ss_pred hhc----------cCCCcHHHHHHCCCcEEEcCCCCC----CCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHH
Q 011766 320 MRM----------LGFAPIKEMLHADICVSLGTDGAP----SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETV 385 (478)
Q Consensus 320 ~~~----------~~~~~~~~~~~~gv~v~~gsD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~a 385 (478)
... .+..+++.++++|+++++|||+++ .....+++.+++.+....... .++|++++
T Consensus 284 ~~~~~~~~~~p~~~~~~~~~~~~~~Gv~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~a 353 (430)
T 1ra0_A 284 IHLQGRFDTYPKRRGITRVKEMLESGINVCFGHDGVFDPWYPLGTANMLQVLHMGLHVCQLM----------GYGQINDG 353 (430)
T ss_dssp HHHTTTTCCSSCCCCCCCHHHHHHTTCCEEECCBCSSBTTBSCCCCCHHHHHHHHHHHTTCC----------SHHHHHGG
T ss_pred hhhccccCCCCCcCCCCCHHHHHHCCCEEEEeCCCCcccCCCCCCCCHHHHHHHHHHHHccC----------CcccHHHH
Confidence 543 356789999999999999999864 224568899888776543210 13689999
Q ss_pred HHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeec
Q 011766 386 LRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILL 461 (478)
Q Consensus 386 l~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~ 461 (478)
++++|.|||+++|+++ |+|++|++|||||+|.+.+ .+.+. ...+|..||++|++||++++++.
T Consensus 354 l~~~T~~~A~~lg~~~--G~i~~G~~ADlvv~d~~~~--------~~~~~---~~~~v~~v~~~G~~v~~~~~~~~ 416 (430)
T 1ra0_A 354 LNLITHHSARTLNLQD--YGIAAGNSANLIILPAENG--------FDALR---RQVPVRYSVRGGKVIASTQPAQT 416 (430)
T ss_dssp GGGGTHHHHHHTTCSS--CSSCTTSBCCEEEESSSSH--------HHHHH---HTCCCSEEEETTEEEEECCCCCE
T ss_pred HHHHHHHHHHHhCCCC--cccCCCCcCCEEEEcCCCh--------hHHHh---ccCcceEEEECCEEEecCCccee
Confidence 9999999999999965 9999999999999998622 11111 24689999999999999998863
No 17
>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A
Probab=100.00 E-value=1e-40 Score=328.30 Aligned_cols=378 Identities=22% Similarity=0.270 Sum_probs=241.5
Q ss_pred cceeEEEe-cEEEeeCCCC----------ceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccc
Q 011766 18 SSTMILHN-AVIVTMDKES----------RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTH 86 (478)
Q Consensus 18 ~~~~~i~n-~~I~t~d~~~----------~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H 86 (478)
.++++|+| ++|+|+++.. ..+.+++|+|+||||++||+..+ ....+ .+++||++|++|+|||||+|
T Consensus 4 ~~d~li~n~g~I~t~~~~~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~-~~~~~--~~~viD~~G~~v~PGfID~H 80 (421)
T 2bb0_A 4 QIDTILINIGQLLTMESSGPRAGKSMQDLHVIEDAVVGIHEQKIVFAGQKGA-EAGYE--ADEIIDCSGRLVTPGLVDPH 80 (421)
T ss_dssp EEEEEEEEEEEECCCCCSSCCCGGGGTCCCCEEEEEEEEETTEEEEEEETTT-TTTCE--EEEEEECTTCEEEECEEECC
T ss_pred cccEEEECCcEEEecCCCccccccccccccccccceEEEECCEEEEEecccc-cccCC--CCeEEeCCCCEeccCeeccC
Confidence 36899999 9999876532 34567899999999999997531 00001 25799999999999999999
Q ss_pred cccchhhhccccCCCCchHHhhhcccc--------------ccCCCChHHHHHHHHHHHHHHHhcCcceeecCCc--cCH
Q 011766 87 VHTSQQLAKGIADDVDLMTWLHDRIWP--------------YESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--QHV 150 (478)
Q Consensus 87 ~H~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~--~~~ 150 (478)
+|+.....+. ..+..|+.+..+. .....+.+...........+++++|||++.+... ...
T Consensus 81 ~H~~~~~~~~----~~~~~~~~g~~~~~~~~~gggi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~ 156 (421)
T 2bb0_A 81 THLVFGGSRE----KEMNLKLQGISYLDILAQGGGILSTVKDTRAASEEELLQKAHFHLQRMLSYGTTTAEVKSGYGLEK 156 (421)
T ss_dssp BCCCCCSCCG----GGHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTEEEEEEECCSCCSH
T ss_pred cCccccccch----HHHHHHHhCCCHHHHhhcCCCcccchhhhhcCCHHHHHHHHHHHHHHHHhcCceEEEeccccCcCc
Confidence 9986532211 1122232211000 0011234444445556678899999999998532 111
Q ss_pred H---HHHHH----HHHhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCC-CCCCeEE
Q 011766 151 S---EMAKA----VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHA-ADGRIRI 222 (478)
Q Consensus 151 ~---~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 222 (478)
. ...+. ....+++....... .+..+..+.. ....... ...+.+..+... ....++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~------------~~~~~~~~~~~~~~~~~~~~ 220 (421)
T 2bb0_A 157 ETELKQLRVAKKLHESQPVDLVSTFMG---AHAIPPEYQN-DPDDFLD------------QMLSLLPEIKEQELASFADI 220 (421)
T ss_dssp HHHHHHHHHHHHHHHHSSSEEEEEEEE---ESSCCGGGTT-CHHHHHH------------HHHTTHHHHHHTTCCSEEEE
T ss_pred cchHHHHHHHHHHHhhcCceEEEEeec---cccCChhhcc-cHHHHHH------------HHHHhhHHhhccCccccccc
Confidence 1 11222 22334544321110 0111111100 0000000 000011111111 1111211
Q ss_pred EEeccccccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHH
Q 011766 223 WFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEI 302 (478)
Q Consensus 223 ~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~ 302 (478)
.......+++.+.++++.|++.|+++++|+.+.... ...+.....+ ...+.|+.+++++++
T Consensus 221 ---~~~~~~~~~e~l~~~~~~a~~~g~~v~~H~~~~~~~------------~~~~~~~~~g----~~~~~H~~~~~~~~i 281 (421)
T 2bb0_A 221 ---FTETGVFTVSQSRRYLQKAAEAGFGLKIHADEIDPL------------GGAELAGKLK----AVSADHLVGTSDEGI 281 (421)
T ss_dssp ---BBCTTSBCHHHHHHHHHHHHHTTCEEEEEECSSSCC------------SHHHHHHHTT----CSEEEECTTCCHHHH
T ss_pred ---cCCcCCCCHHHHHHHHHHHHHCCCCEEEEecccccc------------CHHHHHHHcC----CcEEhhhhcCCHHHH
Confidence 122233578999999999999999999998754211 1222222322 235799999999999
Q ss_pred HHHHhcCCeEEECccchhhc--cCCCcHHHHHHCCCcEEEcCCCCCC-CCCcCHHHHHHHHHHHhcccccccCCCCCCCC
Q 011766 303 GLLSRAGVKVSHCPASAMRM--LGFAPIKEMLHADICVSLGTDGAPS-NNRMSIVDEMYLASLINKGREVFANGTTDPAA 379 (478)
Q Consensus 303 ~~~~~~~~~~~~~p~~~~~~--~~~~~~~~~~~~gv~v~~gsD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (478)
+++++.++.++.||.+++.. .+..+++.++++|+++++|||+++. .+..+++..++.+... ++
T Consensus 282 ~~~~~~g~~~~~~p~~~~~l~~~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~--------------~~ 347 (421)
T 2bb0_A 282 KKLAEAGTIAVLLPGTTFYLGKSTYARARAMIDEGVCVSLATDFNPGSSPTENIQLIMSIAALH--------------LK 347 (421)
T ss_dssp HHHHHHTCEEEECHHHHHHTTCCCCCCHHHHHHTTCCEEECCCBBTTTBCCCCHHHHHHHHHHH--------------SC
T ss_pred HHHHHcCCeEEECCchhhhhcccccchHHHHHHCCCeEEEeCCCCCCCCcccCHHHHHHHHhcc--------------cC
Confidence 99999999999999987654 4678999999999999999998652 3345788888765432 25
Q ss_pred CCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEEC-Ce
Q 011766 380 LPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN-KK 458 (478)
Q Consensus 380 ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~-g~ 458 (478)
+|+++||+++|.|||+++|+++++|+|++||+|||||+|.+++. .+.+.....+|..||++|++||++ |+
T Consensus 348 ls~~eal~~~T~~~A~~lg~~~~~Gsl~~Gk~ADlvvld~~~~~---------~~~~~~~~~~v~~t~v~G~~v~~~~g~ 418 (421)
T 2bb0_A 348 MTAEEIWHAVTVNAAYAIGKGEEAGQLKAGRSADLVIWQAPNYM---------YIPYHYGVNHVHQVMKNGTIVVNREGA 418 (421)
T ss_dssp CCHHHHHHHTTHHHHHHTTCTTTSSCCSTTSBCCEEEESSSSTT---------HHHHSCSSCCEEEEEETTEEEEEC---
T ss_pred CCHHHHHHHHHHHHHHHhCccCCccccCCCCcCCEEEECCcccc---------cCHhHcCCCceEEEEECCEEEEeCCcc
Confidence 99999999999999999999988999999999999999997432 223334457899999999999986 66
Q ss_pred ee
Q 011766 459 IL 460 (478)
Q Consensus 459 ~~ 460 (478)
++
T Consensus 419 ~~ 420 (421)
T 2bb0_A 419 IL 420 (421)
T ss_dssp --
T ss_pred cc
Confidence 64
No 18
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=100.00 E-value=6.4e-42 Score=337.30 Aligned_cols=378 Identities=18% Similarity=0.153 Sum_probs=249.5
Q ss_pred cceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccc
Q 011766 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~ 97 (478)
+++++|+|++|+++++ ..+..+++|+|+||||++|++... ...++++||++|++|+|||||+|+|+.....
T Consensus 3 ~~~~~i~n~~v~~~~~-~~~~~~~~v~I~~g~I~~vg~~~~-----~~~~~~viD~~G~~v~PGlID~H~H~~~~~~--- 73 (423)
T 3feq_A 3 LTITVLQGGNVLDLER-GVLLEHHHVVIDGERIVEVTDRPV-----DLPNAQAIDVRGKTVMPGFIDCHVHVLASNA--- 73 (423)
T ss_dssp -CEEEEEEEEEEETTT-TEEEEEEEEEEETTEEEEEECSCC-----CCSSCEEEECTTCEEEECEEEEEECTTCCSS---
T ss_pred ceEEEEEccEEEeCCC-CcccCCceEEEECCEEEEecCCCC-----CCCCCeEEeCCCCEECCCeeeeEeeecccCC---
Confidence 5689999999998764 356678899999999999998532 1246799999999999999999999965321
Q ss_pred cCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCHHHHHHHHHH---hCCeEEEecccccCC
Q 011766 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVEL---LGLRACLVQSTMDCG 174 (478)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~ 174 (478)
+.. ....++....+........+++++||||++++++... ...+..+. .|++.+.....+...
T Consensus 74 ----~~~---------~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~-~l~~~~~~~~~~g~r~~~~g~~~~~~ 139 (423)
T 3feq_A 74 ----NLG---------VNATQPNILAAIRSLPILDAMLSRGFTSVRDAGGADW-SLMQAVETGLVSGPRIFPSGKALSQT 139 (423)
T ss_dssp ----CHH---------HHHHSCHHHHHHTHHHHHHHHHHTTEEEEEECSSCCH-HHHHHHHTTSSCSCEEECCCSEEECT
T ss_pred ----Chh---------hhhcCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCchH-HHHHHHHcCCCCCCeEEecCcccccC
Confidence 000 0112344455555566788899999999999876543 33333333 477776665554432
Q ss_pred CCCCCcccc-cCCcccCCCCCCccc---cccchhHHHHHHHhcCCCCCCeEEEEe--------ccccccCCHHHHHHHHH
Q 011766 175 EGLPASWAV-RTTDDCIQPDSSISF---NFVSSSQKELYAKHHHAADGRIRIWFG--------IRQIMNATDRLLLETRD 242 (478)
Q Consensus 175 ~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~~ 242 (478)
.+....... .....+......... .....+..+.+++....+...++++.. ++....++++.+.++++
T Consensus 140 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~ 219 (423)
T 3feq_A 140 GGHGDFRPRGDLLEPCSCCFRTGAIARVVDGVEGVRLAVREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVD 219 (423)
T ss_dssp TSTTCCCCC---CCCCCSSCCTTCSEEECCSHHHHHHHHHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHH
T ss_pred CCCccccccccccccccccccccccceecCCHHHHHHHHHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHH
Confidence 221111000 000000000000000 011224555566665566677876643 44556789999999999
Q ss_pred HHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEE--------
Q 011766 243 MAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH-------- 314 (478)
Q Consensus 243 ~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~-------- 314 (478)
.|++.|+++++|+.+..... ..++ .+ ...+.|+..++++.++++++.++.++.
T Consensus 220 ~A~~~g~~v~~H~~~~~~i~--------------~~l~-~g----~~~i~H~~~~~~~~~~~l~~~gv~~~pt~~~~~~~ 280 (423)
T 3feq_A 220 EAEAANTYVMAHAYTGRAIA--------------RAVR-CG----VRTIEHGNLVDEAAAKLMHEHGAFVVPTLVTYDAL 280 (423)
T ss_dssp HHHHTTCCEEEEEEEHHHHH--------------HHHH-HT----CCEEEEEEECCHHHHHHHHHHTCEEECCTHHHHHH
T ss_pred HHHHCCCeEEEEeCChHHHH--------------HHHH-cC----CCEEeccCcCCHHHHHHHHHCCCccccchHHHHHH
Confidence 99999999999998543211 1111 12 235899999999999999999998843
Q ss_pred ---------Cccchhhc-----cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCC
Q 011766 315 ---------CPASAMRM-----LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAAL 380 (478)
Q Consensus 315 ---------~p~~~~~~-----~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 380 (478)
+|..+.+. ....+++.++++|+++++|||++... ......+++... +.+
T Consensus 281 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~gTD~~~~~-~~~~~~e~~~~~----------------~~l 343 (423)
T 3feq_A 281 AKHGAEFGMPPESVAKVASVQQKGRESLEIYANAGVKMGFGSDLLGEM-HAFQSGEFRIRA----------------EVL 343 (423)
T ss_dssp HHHTGGGTCCTTTSSTHHHHHHHHHHHHHHHHHHTCCBCCCCCCCGGG-GGGTTHHHHHHH----------------TTS
T ss_pred HhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC-CcchHHHHHHHH----------------hhC
Confidence 23333222 14567899999999999999986321 123334443321 138
Q ss_pred CHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeee
Q 011766 381 PAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKIL 460 (478)
Q Consensus 381 s~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~ 460 (478)
|++|||+++|.|||+++|+++++|+|++||.|||||+|.|++. ++. .+.....+|..||++|++|+++++..
T Consensus 344 s~~eal~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~p~~-----~~~---~~~~~~~~v~~v~~~G~~v~~~~~~~ 415 (423)
T 3feq_A 344 GNLEALRSATTVAAEIVNMQGQLGVIAVGAIADLVVLDGNPLE-----DIG---VVADEGARVEYVLQRGTLVKRQAAGR 415 (423)
T ss_dssp CHHHHHHTTTHHHHHHTTCBTTBSSCCTTSBCCEEEESSCTTT-----CGG---GTSSSTTSEEEEEETTEEEEEC----
T ss_pred CHHHHHHHHHHHHHHHhCCCCCceeECCCCcCCEEEECCChhh-----CHH---HHhccCCCceEEEECCEEEeCCcccc
Confidence 9999999999999999999988999999999999999998543 321 11112268999999999999999875
Q ss_pred cc
Q 011766 461 LL 462 (478)
Q Consensus 461 ~~ 462 (478)
..
T Consensus 416 ~~ 417 (423)
T 3feq_A 416 EG 417 (423)
T ss_dssp --
T ss_pred cc
Confidence 43
No 19
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=100.00 E-value=4.1e-41 Score=329.41 Aligned_cols=363 Identities=16% Similarity=0.128 Sum_probs=248.0
Q ss_pred eeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccC
Q 011766 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (478)
Q Consensus 20 ~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~ 99 (478)
+++|+|++|+++++ ..++++++|+|+||||++|++..+. ...++++||++|++|+|||||+|+|+......
T Consensus 3 ~~~i~~~~i~~~~~-~~~~~~~~v~I~~g~I~~vg~~~~~----~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~---- 73 (403)
T 3gnh_A 3 IKAVSAARLLDVAS-GKYVDNPLVIVTDGRITSIGKKGDA----VPAGATAVDLPGVTLLPGLIDMHVHLDSLAEV---- 73 (403)
T ss_dssp EEEEEEEEEEETTT-TEEEESEEEEEETTEEEEEEETTSC----CCTTCEEEEEEEEEEEECEEEEEECTTCCTTC----
T ss_pred cEEEEccEEEECCC-CcccCCCEEEEECCEEEEEeCCCCC----CCCCCeEEECCCCEEcCCeEeeeEccccCccc----
Confidence 68999999998764 3556889999999999999976421 12467999999999999999999999643210
Q ss_pred CCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC-HHHHHHHHHHh----CCeEEEecccccC-
Q 011766 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-VSEMAKAVELL----GLRACLVQSTMDC- 173 (478)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~-~~~~~~~~~~~----g~~~~~~~~~~~~- 173 (478)
.|.. ....+++.........+++++++||||++|+++.. .....+..... |.+.+.....+..
T Consensus 74 -----~~~~------~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~g~~~gpr~~~~~~~~~~~ 142 (403)
T 3gnh_A 74 -----GGYN------SLEYSDRFWSVVQTANAKKTLEAGFTTVRNVGAADYDDVGLREAIDAGYVPGPRIVTAAISFGAT 142 (403)
T ss_dssp -----CSGG------GGGSCHHHHHHHHHHHHHHHHHTTEEEEEECCCSTTHHHHHHHHHHTTSSCCCEEEECCSCEEST
T ss_pred -----chhh------hhcCCHHHHHHHHHHHHHHHHhCCeeEEEeCCCCccccHHHHHHHHCCCCCCCeEEecCcccccC
Confidence 1110 11234445555556677899999999999987643 22233333343 4477665544432
Q ss_pred -CCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEe--------ccccccCCHHHHHHHHHHH
Q 011766 174 -GEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFG--------IRQIMNATDRLLLETRDMA 244 (478)
Q Consensus 174 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~~~a 244 (478)
++.....+..... ... ........+..+.+++....+...++++.. ++..+.++++.+.++++.|
T Consensus 143 g~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A 216 (403)
T 3gnh_A 143 GGHCDSTFFPPSMD--QKN----PFNSDSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEA 216 (403)
T ss_dssp TSTTSCCSSCGGGC--CCC----TTCCCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHH
T ss_pred CCCcccccCchhhc--ccC----CcccCCHHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHH
Confidence 1111111100000 000 000011224556666666666677877642 3455678999999999999
Q ss_pred HHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc--
Q 011766 245 REFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-- 322 (478)
Q Consensus 245 ~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-- 322 (478)
++.|+++++|+.+...... .++ .+ ...+.|+.++++++++++++.|+.++.++......
T Consensus 217 ~~~g~~v~~H~~~~~~i~~--------------~~~-~g----~~~i~H~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 277 (403)
T 3gnh_A 217 HMAGIKVAAHAHGASGIRE--------------AVR-AG----VDTIEHASLVDDEGIKLAVQKGAYFSMDIYNTDYTQA 277 (403)
T ss_dssp HHTTCEEEEEECSHHHHHH--------------HHH-TT----CSEEEECTTCCHHHHHHHHHHTCEEECCCSTHHHHHH
T ss_pred HHCCCEEEEEeCCHHHHHH--------------HHH-hC----CCEEecCCcCCHHHHHHHHHCCCEEEeeechhhhhhh
Confidence 9999999999977543211 111 12 23689999999999999999999999877532110
Q ss_pred --------------------cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCH
Q 011766 323 --------------------LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPA 382 (478)
Q Consensus 323 --------------------~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~ 382 (478)
....+++.++++|+++++|||++.... ..++.++.... . .++|+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gTD~~~~~~-~~~~~e~~~~~--~-------------~gl~~ 341 (403)
T 3gnh_A 278 EGKKNGVLEDNLRKDRDIGELQRENFRKALKAGVKMVYGTDAGIYPH-GDNAKQFAVMV--R-------------YGATP 341 (403)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTCEEECCCCBTTBCT-TCGGGHHHHHH--H-------------TTCCH
T ss_pred hccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEecCCCCCCC-CchHHHHHHHH--H-------------cCCCH
Confidence 112468899999999999999864422 23345554322 1 26999
Q ss_pred HHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEE
Q 011766 383 ETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMK 455 (478)
Q Consensus 383 ~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~ 455 (478)
+|+|+++|.|||+++|+++++|+|++||.|||||+|.|++ +|+ .. ..+|..||++|++|+.
T Consensus 342 ~~al~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~p~-----~~~-~~------~~~v~~v~~~G~~v~~ 402 (403)
T 3gnh_A 342 LQAIQSATLTAAEALGRSKDVGQVAVGRYGDMIAVAGDPL-----ADV-TT------LEKPVFVMKGGAVVKA 402 (403)
T ss_dssp HHHHHHTTHHHHHHHTCTTTSSSCCTTSBCCEEEESSCTT-----TCG-GG------GGSCSEEEETTEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCCceeECCCCcCCEEEECCChh-----hCH-HH------hcCcCEEEECCEEEeC
Confidence 9999999999999999998899999999999999999944 332 11 1579999999998874
No 20
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=100.00 E-value=1.4e-41 Score=334.87 Aligned_cols=378 Identities=17% Similarity=0.198 Sum_probs=248.8
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~ 96 (478)
.+++++|+|++|+++++ ..+..+++|+|+||+|++|++... ...++++||++|++|+|||||+|+|+.....
T Consensus 2 ~m~~~~i~n~~i~~~~~-~~~~~~~~i~i~~g~I~~i~~~~~-----~~~~~~~iD~~g~~v~PGliD~H~H~~~~~~-- 73 (426)
T 2r8c_A 2 SLTTFLFRNGALLDPDH-PDLLQGFEILIEDGFIREVSDKPI-----KSSNAHVIDVKGKTIMPGLIDLHVHVVAIEF-- 73 (426)
T ss_dssp --CEEEEEEEEECCTTS-SSCEEEEEEEEESSBEEEEESSCC-----CCSSCEEEECTTCEEEECEEEEEECTTCCSS--
T ss_pred CcccEEEEeeEEEeCCC-CcccCCceEEEECCEEEEEcCCCC-----CCCCCeEEECCCCEEcCCeEeeeeccccccC--
Confidence 35679999999997654 345677899999999999998532 1246789999999999999999999965322
Q ss_pred ccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCHHHHHHHHHH---hCCeEEEecccccC
Q 011766 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVEL---LGLRACLVQSTMDC 173 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~ 173 (478)
.+.. ...++....+........+++++||||++++++... ...+..+. .|++.+.....+..
T Consensus 74 -----~~~~---------~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~-~l~~~i~~~~~~gpri~~~g~~i~~ 138 (426)
T 2r8c_A 74 -----NLPR---------VATLPNVLVTLRAVPIMRAMLRRGFTTVRDAGGAGY-PFKQAVESGLVEGPRLFVSGRALSQ 138 (426)
T ss_dssp -----CHHH---------HHHSCHHHHHHHHHHHHHHHHHTTEEEEEECSSCCH-HHHHHHHTTSSCCCEEEECCSEEEC
T ss_pred -----Cchh---------hccCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCchH-HHHHHHHcCCCCCCeEEecCCcccC
Confidence 0000 112344555666667788899999999999986543 33333333 46777766555433
Q ss_pred CCCCCCcccccC------CcccCCCCCCccc-cccchhHHHHHHHhcCCCCCCeEEEEe--------ccccccCCHHHHH
Q 011766 174 GEGLPASWAVRT------TDDCIQPDSSISF-NFVSSSQKELYAKHHHAADGRIRIWFG--------IRQIMNATDRLLL 238 (478)
Q Consensus 174 ~~~~~~~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~ 238 (478)
..+......... ...+......... .....+..+.+++....+...++++.. ++..+.++++.+.
T Consensus 139 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~ 218 (426)
T 2r8c_A 139 TGGHADPRARSDYMPPDSPCGCCVRVGALGRVADGVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIR 218 (426)
T ss_dssp TTSTTCCCCCSSBCCCSCSSSSBCCTTCCEEECCSHHHHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHH
T ss_pred CCCCcccccccccccccccccccccccccccccCCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHH
Confidence 211111000000 0000000000000 001123444455444445567776543 4455678999999
Q ss_pred HHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEEC---
Q 011766 239 ETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHC--- 315 (478)
Q Consensus 239 ~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~--- 315 (478)
++++.|++.|+++++|+.+...... .++ .+ ...+.|+..++++.++++++.++.++.+
T Consensus 219 ~~~~~A~~~g~~v~~H~~~~~~i~~--------------al~-~G----~~~i~H~~~~~~~~~~~~~~~gv~~~pt~~~ 279 (426)
T 2r8c_A 219 AIVAEAQGRGTYVLAHAYTPAAIAR--------------AVR-CG----VRTIEHGNLIDDETARLVAEHGAYVVPTLVT 279 (426)
T ss_dssp HHHHHHHHTTCCEEEEECSHHHHHH--------------HHH-TT----CSEEEECTTCCHHHHHHHHHTTCEEECCTHH
T ss_pred HHHHHHHHcCCEEEEEeCChHHHHH--------------HHH-cC----CCEEecCCcCCHHHHHHHHHcCCeEeechHH
Confidence 9999999999999999986433211 111 11 2358999999999999999999988532
Q ss_pred --------------ccchhhc-----cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCC
Q 011766 316 --------------PASAMRM-----LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTD 376 (478)
Q Consensus 316 --------------p~~~~~~-----~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (478)
|..+... ....+++.++++|+++++|||+++.. ......+++..
T Consensus 280 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~Gv~v~lgTD~~~~~-~~~~~~e~~~~---------------- 342 (426)
T 2r8c_A 280 YDALASEGEKYGLPPESIAKIADVHGAGLHSIEIMKRAGVKMGFGTDLLGEA-QRLQSDEFRIL---------------- 342 (426)
T ss_dssp HHHHHHHTTTTTCCHHHHTTSTTTGGGHHHHHHHHHHTTCEECCCCCCCGGG-GGGTTHHHHHH----------------
T ss_pred HHHHhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCC-CcchHHHHHHH----------------
Confidence 2222221 23457889999999999999986431 12233343321
Q ss_pred CCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEEC
Q 011766 377 PAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN 456 (478)
Q Consensus 377 ~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~ 456 (478)
.+.+|++|||+++|.|||+++|+++++|+|++||.|||||+|.|++. |+.. +.....+|..||++|++|+++
T Consensus 343 ~~~l~~~eal~~aT~~~A~~lg~~~~~G~i~~G~~ADlvvld~~p~~-----~~~~---~~~~~~~v~~v~~~G~~v~~~ 414 (426)
T 2r8c_A 343 AEVLSPAEVIASATIVSAEVLGMQDKLGRIVPGAHADVLVVDGNPLK-----SVDC---LLGQGEHIPLVMKDGRLFVNE 414 (426)
T ss_dssp TTTSCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTT-----CGGG---TCSSSTTCCEEEETTEEEEET
T ss_pred HhcCCHHHHHHHHHHHHHHHhCCCCCCccCCCCCcCCEEEECCChHh-----CHHH---HhCcCCcceEEEECCEEEecc
Confidence 11399999999999999999999988999999999999999998543 3211 111126899999999999999
Q ss_pred Ceeec
Q 011766 457 KKILL 461 (478)
Q Consensus 457 g~~~~ 461 (478)
++..+
T Consensus 415 ~~~~~ 419 (426)
T 2r8c_A 415 LEGHE 419 (426)
T ss_dssp TC---
T ss_pred ccccc
Confidence 87643
No 21
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=100.00 E-value=8.3e-41 Score=327.17 Aligned_cols=370 Identities=18% Similarity=0.194 Sum_probs=250.1
Q ss_pred cceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhh---
Q 011766 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA--- 94 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~--- 94 (478)
+++++|+|++|+++ ... ++|+|+||||++|++..+. .+.++||++|++|+|||||+|+|+.+..+
T Consensus 4 ~~~~li~n~~v~~~--~~~----~~v~I~~g~I~~vg~~~~~------~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~ 71 (403)
T 2qt3_A 4 DFDLIIRNAYLSEK--DSV----YDIGIVGDRIIKIEAKIEG------TVKDEIDAKGNLVSPGFVDAHTHMDKSFTSTG 71 (403)
T ss_dssp CEEEEEEEEEETTT--TEE----EEEEEETTEEEEEESSCCS------CEEEEEECTTCBEEECEEEEEECGGGTTTTCS
T ss_pred ccceEEEeeEecCC--Cee----EEEEEECCEEEEeecCCCC------CccceEcCCCCEecccceeeeeccchhhcccc
Confidence 46899999999953 222 6999999999999975421 13479999999999999999999987654
Q ss_pred ------cccc--CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc---C----HHHHHHHHHH
Q 011766 95 ------KGIA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---H----VSEMAKAVEL 159 (478)
Q Consensus 95 ------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~---~----~~~~~~~~~~ 159 (478)
++.. ...++.+|+... . . .+.++.+........+++++|||+++++... . .....+..+.
T Consensus 72 ~~~~~~~g~~~~~~~~l~~~~~~~--~--~-~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~ 146 (403)
T 2qt3_A 72 ERLPKFWSRPYTRDAAIEDGLKYY--K--N-ATHEEIKRHVIEHAHMQVLHGTLYTRTHVDVDSVAKTKAVEAVLEAKEE 146 (403)
T ss_dssp SSSCTTCSSCCCHHHHHHHHHHHH--H--H-CCHHHHHHHHHHHHHHHHHTTEEEEEEEEECSTTTTTHHHHHHHHHHHH
T ss_pred cccccccCCCcccCcCHHHHHHHh--h--h-cCHHHHHHHHHHHHHHHHHcCCcEEEEEEcccCccccchHHHHHHHHHH
Confidence 1111 011255666442 2 1 2566666666778889999999999654321 1 1222333333
Q ss_pred hCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHH
Q 011766 160 LGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLE 239 (478)
Q Consensus 160 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 239 (478)
.+.........+... + ..... +..+.+++....+...+. .+.++..+..+++.+.+
T Consensus 147 ~~~~~~~~~~~~~~~-~----------~~~~~------------~~~~~~~~~~~~g~~~~~-~~~p~~~~~~~~~~l~~ 202 (403)
T 2qt3_A 147 LKDLIDIQVVAFAQS-G----------FFVDL------------ESESLIRKSLDMGCDLVG-GVDPATRENNVEGSLDL 202 (403)
T ss_dssp HTTTCEEEEEEECTT-C----------TTTST------------THHHHHHHHHHTTCSEEE-CBCTTTTTSCHHHHHHH
T ss_pred hhcceeEEEEEcCCc-c----------cccCc------------chHHHHHHHHhcCCCeEE-EecCCCCCCChHHHHHH
Confidence 221110100001000 0 00011 344445444433333222 13355555666789999
Q ss_pred HHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCCh-------hHHHHHHhcCCeE
Q 011766 240 TRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-------TEIGLLSRAGVKV 312 (478)
Q Consensus 240 ~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~-------~~~~~~~~~~~~~ 312 (478)
+++.|+++|+++++|+.+.......... ..++.+...+. ..+..+.|+.++++ ++++++++.|+.+
T Consensus 203 ~~~~A~~~g~~v~~H~~~~~~~~~~~~~------~~~~~~~~~g~-~~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g~~v 275 (403)
T 2qt3_A 203 CFKLAKEYDVDIDYHIHDIGTVGVYSIN------RLAQKTIENGY-KGRVTTSHAWCFADAPSEWLDEAIPLYKDSGMKF 275 (403)
T ss_dssp HHHHHHHTTCEEEEEECCCHHHHHHHHH------HHHHHHHHTTC-TTSEEEEECTHHHHSCHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHcCCCeEEEeCCcccchhHHHH------HHHHHHHHcCC-CCCeEEEehhhhccCChhhHHHHHHHHHHcCCEE
Confidence 9999999999999999887543221111 02333444554 56789999999875 8999999999999
Q ss_pred EECccchhhccCCCcHHHHHHCCCcEEEcCCCCC----CCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHH
Q 011766 313 SHCPASAMRMLGFAPIKEMLHADICVSLGTDGAP----SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 388 (478)
Q Consensus 313 ~~~p~~~~~~~~~~~~~~~~~~gv~v~~gsD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~ 388 (478)
++||... .+..+++.++++|+++++|||++. .....+++.+++.+..... + ...+|+++++++
T Consensus 276 ~~~p~~~---~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~g~~~~~~~~~~~~~~~~--------~--~~~~~~~~al~~ 342 (403)
T 2qt3_A 276 VTCFSST---PPTMPVIKLLEAGINLGCASDNIRDFWVPFGNGDMVQGALIETQRLE--------L--KTNRDLGLIWKM 342 (403)
T ss_dssp EEETTTC---CTTCCHHHHHHTTCEEEEECCSCSSSSCSCCCCCHHHHHHHHHHHTT--------C--CSHHHHHHHHHH
T ss_pred EECCCCC---CCCCCHHHHHHcCCcEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHhC--------c--CCccCHHHHHHH
Confidence 9999643 457899999999999999999862 1123477887776554321 1 113789999999
Q ss_pred HhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeee
Q 011766 389 ATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKIL 460 (478)
Q Consensus 389 ~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~ 460 (478)
+|.|||+++|++++ |+|++||.|||||+|.++ |+..+.+ ..+|..||++|++|+++|+++
T Consensus 343 ~T~~~A~~lg~~~~-g~i~~G~~ADlvv~d~~~--------~~~~~~~---~~~v~~v~v~G~~v~~~g~~~ 402 (403)
T 2qt3_A 343 ITSEGARVLGIEKN-YGIEVGKKADLVVLNSLS--------PQWAIID---QAKRLCVIKNGRIIVKDEVIV 402 (403)
T ss_dssp TTHHHHHHHTCGGG-CSSSTTSBCCEEEESSSS--------HHHHHHH---CCCEEEEEETTEEEEESSSBC
T ss_pred HHHHHHHhcCCCcc-cCCCCCCcCCEEEEcCCC--------hHHHhhc---CCCccEEEECCEEEecCCccc
Confidence 99999999999764 999999999999999972 3444333 358999999999999999986
No 22
>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16
Probab=100.00 E-value=5.3e-41 Score=329.74 Aligned_cols=366 Identities=18% Similarity=0.187 Sum_probs=251.0
Q ss_pred CCCCCCC-CccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeeccccccc
Q 011766 9 GSSSGSL-GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHV 87 (478)
Q Consensus 9 ~~~~~~~-~~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~ 87 (478)
+++..+. .++++++|+|++|+++++ ..+.+++|+|+||||++|++..+.+.. ..++++||++ ++|+|||||+|+
T Consensus 26 ~~~~~~~~~~~~~~li~n~~v~~~~~--~~~~~~~V~I~~g~I~~vg~~~~~~~~--~~~~~viD~~-~~v~PGlID~H~ 100 (420)
T 2imr_A 26 TTPDALTPDAHTPRLLTCDVLYTGMG--GAQSPGGVVVVGETVAAAGHPDELRRQ--YPHAAEERAG-AVIAPPPVNAHT 100 (420)
T ss_dssp ----------CCEEEEEESEEECC-----EESSEEEEEETTEEEEEECHHHHHHH--CTTCEEEECC-SEESSCCCEEEE
T ss_pred ccccccCCcccccEEEECCEEEeCCC--CeeeccEEEEECCEEEEecCccccccc--CCCCeeecCC-eEECCCCEecCc
Confidence 3444443 345678999999997653 356788999999999999975432211 1246899999 999999999999
Q ss_pred ccchhhhccccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCHHHHHHHHHHhCCeEEEe
Q 011766 88 HTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLV 167 (478)
Q Consensus 88 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~g~~~~~~ 167 (478)
|+.....++.. .++.+|+....++.+..++. ........+++++||||+++++.. ...+.......|++.+..
T Consensus 101 H~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~GvTtv~d~~~~-~~~~~~~~~~~g~r~~~~ 173 (420)
T 2imr_A 101 HLDMSAYEFQA--LPYFQWIPEVVIRGRHLRGV----AAAQAGADTLTRLGAGGVGDIVWA-PEVMDALLAREDLSGTLY 173 (420)
T ss_dssp ESSCCHHHHHH--CHHHHTSHHHHHHHTTCCHH----HHHHHHHHHHHHTTCCCEEEEECS-HHHHHHHHTCTTCCEEEE
T ss_pred Ccchhhhhhcc--CCHHHHHHHhhhhhhhccCH----HHHHHHHHHHHhcCcEEEEEccCC-HHHHHHHHHhcCcEEEEE
Confidence 99765444322 34556654432222211211 333456678999999999997632 222222344567766554
Q ss_pred cccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHc
Q 011766 168 QSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 247 (478)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~ 247 (478)
..... .++.. ...... +..+.++.+...+.+.++..+.++..+.++++.+.++++.+++.
T Consensus 174 ~~~~~----~~~~~----~~~~~~------------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~ 233 (420)
T 2imr_A 174 FEVLN----PFPDK----ADEVFA------------AARTHLERWRRLERPGLRLGLSPHTPFTVSHRLMRLLSDYAAGE 233 (420)
T ss_dssp EEECB----CCGGG----HHHHHH------------HHHHHHHHHHTTCBTTEEEEEEECCSSSBCHHHHHHHHHHHHHH
T ss_pred eeecC----CCchh----hHHHHH------------HHHHHHHHHhcccCCceEEEecCCcCCCcCHHHHHHHHHHHHHC
Confidence 33321 11100 000111 44455555555444567777777777778999999999999999
Q ss_pred CCceeEeccCChhhhHHHhhhcCC------------------------CCchHHHHhhhCCCCCCeeeeeeccCChhHHH
Q 011766 248 KTGIHMHVAEIPYENQVVMDTRKV------------------------DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIG 303 (478)
Q Consensus 248 ~~~v~~H~~~~~~~~~~~~~~~~~------------------------~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~ 303 (478)
|+++++|+.+...+........+. ....++.+...+.+..+.++.|+.++++++++
T Consensus 234 g~~v~~H~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~H~~~l~~~~i~ 313 (420)
T 2imr_A 234 GLPLQIHVAEHPTELEMFRTGGGPLWDNRMPALYPHTLAEVIGREPGPDLTPVRYLDELGVLAARPTLVHMVNVTPDDIA 313 (420)
T ss_dssp TCCBEEEESCSHHHHHHHHHSCSTTGGGSCGGGSCSSHHHHHTSCCCTTCCHHHHHHHHTCGGGCCEEEECCSCCHHHHH
T ss_pred CCcEEEEeCCCHHHHHHHHHhhccccccccccchhhhhhhhccccccCCCCHHHHHHHcCCCCCCeEEEecCcCCHHHHH
Confidence 999999998776544443332110 12245666677777778899999999999999
Q ss_pred HHHhcCCeEEECccchhhc-cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCH
Q 011766 304 LLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPA 382 (478)
Q Consensus 304 ~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~ 382 (478)
++++.++.+++||.++... .+.+|++.++++|+++++|||+++.+...+++.+++.+... ..++|+
T Consensus 314 ~l~~~g~~~~~~p~~~~~~~~~~~~l~~~~~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~-------------~~~ls~ 380 (420)
T 2imr_A 314 RVARAGCAVVTCPRSNHHLECGTFDWPAFAAAGVEVALGTDSVASGETLNVREEVTFARQL-------------YPGLDP 380 (420)
T ss_dssp HHHHHTCCEEECHHHHHHTTCCCCCHHHHHHTTCCEEECCCCHHHHSCSCTHHHHHHHHHH-------------CTTSCH
T ss_pred HHHHcCCeEEECHHHHHHhccCCCCHHHHHHCCCeEEEECCCCccCCCCCHHHHHHHHHhc-------------CCCCCH
Confidence 9999999999999887655 56889999999999999999986543456788888766421 125999
Q ss_pred HHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCC
Q 011766 383 ETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF 420 (478)
Q Consensus 383 ~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~ 420 (478)
+++++++|.|||+++|+++++|+|++||+||| |+|.+
T Consensus 381 ~~al~~aT~n~A~~lgl~~~~GsL~~Gk~ADl-vvd~~ 417 (420)
T 2imr_A 381 RVLVRAAVKGGQRVVGGRTPFLRRGETWQEGF-RWELS 417 (420)
T ss_dssp HHHHHHHHHHHHHHHC--CCCCSTTSBCCGGG-BGGGC
T ss_pred HHHHHHHHHHHHHHhCCCCCceeeCCCCccCE-EEECC
Confidence 99999999999999999888999999999999 77876
No 23
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A*
Probab=100.00 E-value=6.8e-40 Score=321.76 Aligned_cols=378 Identities=17% Similarity=0.207 Sum_probs=243.7
Q ss_pred ceeEEEecEEEeeCCC---CceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhc
Q 011766 19 STMILHNAVIVTMDKE---SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (478)
Q Consensus 19 ~~~~i~n~~I~t~d~~---~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~ 95 (478)
++++|+|++|+|+++. .+.+.+++|+|+||||++||+..+.+. ..++++||++|++|+|||||+|+|+.....+
T Consensus 5 ~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~---~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~ 81 (416)
T 2q09_A 5 CERVWLNVTPATLRSDLADYGLLEPHALGVHEGRIHALVPMQDLKG---PYPAHWQDMKGKLVTPGLIDCHTHLIFAGSR 81 (416)
T ss_dssp CSEEEEEEEEBCCCTTSSTTCBCSSEEEEEETTEEEEEEEGGGCC-----CCTTSEECTTCEEEECEEEEEECCCCCSCC
T ss_pred ccEEEEcCeEeccCcccccccccccceEEEECCEEEEEcChhhccc---cCCCeEEeCCCCEECCcccccccCcchhhhh
Confidence 5789999999987753 245577899999999999997543211 0135799999999999999999999654321
Q ss_pred cccCCCCchHHhhhcccc--------------ccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc--CHH---HHHH-
Q 011766 96 GIADDVDLMTWLHDRIWP--------------YESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--HVS---EMAK- 155 (478)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~--~~~---~~~~- 155 (478)
. ..+..|+.+..|. .....++++..........+++++||||+.+++.. ... ...+
T Consensus 82 ~----~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~ 157 (416)
T 2q09_A 82 A----EEFELRQKGVPYAEIARKGGGIISTVRATRAASEDQLFELALPRVKSLIREGVTTVEIKSGYGLTLEDELKMLRV 157 (416)
T ss_dssp H----HHHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHTEEEEEEECCSCCSHHHHHHHHHH
T ss_pred H----HHHHHHHhcCCHHHhhhcCCcEeehhhhccCCCHHHHHHHHHHHHHHHHHcCCcEEEeccCcccChHhHHHHHHH
Confidence 1 0122232221110 00113444444555566788999999999986421 111 1112
Q ss_pred ---HHHHhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccC
Q 011766 156 ---AVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNA 232 (478)
Q Consensus 156 ---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (478)
.....+++....... .+..+..+.. .... ++.....+.+..+... +..............
T Consensus 158 ~~~~~~~~~~r~~~~~~~---~~~~~~~~~~-~~~~-----------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 220 (416)
T 2q09_A 158 ARRLGEALPIRVKTTLLA---AHAVPPEYRD-DPDS-----------WVETICQEIIPAAAEA--GLADAVDVFCEHIGF 220 (416)
T ss_dssp HHHHHHHSSSEEEEEEEE---ETSCCGGGTT-CHHH-----------HHHHHHHTHHHHHHHT--TCCSEEEEBBSTTSB
T ss_pred HHHHHhhCCceEEEeeec---cccCCccccC-CHHH-----------HHHHHHhhhhHHHHhc--ccccccccccCCCcC
Confidence 223455655422111 0111111100 0000 0000011122222111 111111222333456
Q ss_pred CHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeE
Q 011766 233 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKV 312 (478)
Q Consensus 233 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~ 312 (478)
+++.+.++++.+++.|+++++|+.+.... ..++.....+ ...+.|+.++++++++++++.++.+
T Consensus 221 ~~~~~~~~~~~a~~~g~~v~~H~~~~~~~------------~~~~~~~~~g----~~~~~H~~~~~~~~~~~~~~~g~~~ 284 (416)
T 2q09_A 221 SLAQTEQVYLAADQYGLAVKGHMDQLSNL------------GGSTLAANFG----ALSVDHLEYLDPEGIQALAHRGVVA 284 (416)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEESSSCCC------------SHHHHHHHTT----CSEEEECTTCCHHHHHHHHHHTCEE
T ss_pred CHHHHHHHHHHHHHCCCcEEEEECCCCch------------HHHHHHHHcC----CCEEeecccCCHHHHHHHHHcCCeE
Confidence 88999999999999999999999764310 0122222222 2357999999999999999999999
Q ss_pred EECccchhhc--cCCCcHHHHHHCCCcEEEcCCCCCC-CCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHH
Q 011766 313 SHCPASAMRM--LGFAPIKEMLHADICVSLGTDGAPS-NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMA 389 (478)
Q Consensus 313 ~~~p~~~~~~--~~~~~~~~~~~~gv~v~~gsD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~ 389 (478)
+.||..++.. .+.+|++.+++.|+++++|||+++. .+..+++.+++.+.... ++|++++++++
T Consensus 285 ~~~p~~~~~~~~~~~~~~~~~~~~Gv~~~~gtD~~~~~~~~~~~~~~~~~~~~~~--------------~l~~~~al~~~ 350 (416)
T 2q09_A 285 TLLPTAFYFLKETKLPPVVALRKAGVPMAVSSDINPGTAPIVSLRMAMNMACTLF--------------GLTPVEAMAGV 350 (416)
T ss_dssp EECHHHHHHTTCCCCCCHHHHHHTTCCEEECCCCBTTTBCCCCHHHHHHHHHHHH--------------CCCHHHHHHHT
T ss_pred EEcCccHHhhccccccCHHHHHHCCCeEEEecCCCCccCCCCCHHHHHHHHHHHc--------------CCCHHHHHHHH
Confidence 9999987654 4678999999999999999998653 23467888887654321 59999999999
Q ss_pred hHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCee
Q 011766 390 TINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKI 459 (478)
Q Consensus 390 T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~ 459 (478)
|.|||+++|+++++|+|++||.|||||+|.+++. ...+.....+|..||++|++||+++-+
T Consensus 351 T~~~A~~lg~~~~~G~l~~G~~ADlvvld~~~~~---------~~~~~~~~~~v~~v~v~G~~v~~~~~~ 411 (416)
T 2q09_A 351 TRHAARALGEQEQLGQLRVGMLADFLVWNCGHPA---------ELSYLIGVDQLVSRVVNGEETLHGEGH 411 (416)
T ss_dssp THHHHHHTTCTTTSSSCCTTSBCCEEEESSSCTT---------HHHHSCSCCCEEEEEETTEECCC----
T ss_pred HHHHHHHhCCCccceecCCCCCccEEEECCCchh---------hhhhhhccCcceEEEECCEEEEeCCCc
Confidence 9999999999888999999999999999998543 222333457899999999999987643
No 24
>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A
Probab=100.00 E-value=7.2e-40 Score=322.09 Aligned_cols=376 Identities=19% Similarity=0.249 Sum_probs=239.2
Q ss_pred cceeEEEecEEEeeCCC---CceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhh
Q 011766 18 SSTMILHNAVIVTMDKE---SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA 94 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~---~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~ 94 (478)
+++++|+|++|+|+++. .+.+.+++|+|+||||++||+..+.+... ...+++||++|++|+|||||+|+|+.....
T Consensus 14 ~~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~-~~~~~viD~~G~~v~PG~ID~H~H~~~~~~ 92 (419)
T 2puz_A 14 NATALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDDL-STADETTDCGGRWITPALIDCHTHLVFGGN 92 (419)
T ss_dssp -CEEEEEEEEEECCCTTSSTTCEEEEEEEEEETTEEEEEEETTSCCGGG-SCCSEEEECTTCEEEECEEECCCCCCCSSC
T ss_pred CCcEEEECCeEeccCcccccCCcccceEEEEECCEEEEEcChhhhhhhc-cCCCeEEeCCCCEeCcCceecccCccchhh
Confidence 46899999999998753 35567889999999999999754322111 113589999999999999999999864321
Q ss_pred ccccCCCCchHHhhhccc--------------cccCCCChHHHHHHHHHHHHHHHhcCcceeecCCc--cCHH---HHHH
Q 011766 95 KGIADDVDLMTWLHDRIW--------------PYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--QHVS---EMAK 155 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~--~~~~---~~~~ 155 (478)
+. ..+..|+.+..+ ......+.+..+........+++++|||++.+... .... ...+
T Consensus 93 ~~----~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~ 168 (419)
T 2puz_A 93 RA----MEFEMRLNGATYEEIAKAGGGIVSSVRDTRALSDEVLVAQALPRLDTLLSEGVSTIEIKSGYGLDIETELKMLR 168 (419)
T ss_dssp CH----HHHHHHHTTCCHHHHHHTTCSHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTEEEEEEECCSCCSHHHHHHHHH
T ss_pred hH----HHHHHHhcCCCHHHHHhcCCCeecchhhhccCCHHHHHHHHHHHHHHHHhcCCeEEEeCCCCCCCchhHHHHHH
Confidence 11 001112111000 00011233444444555678899999999988432 1111 2223
Q ss_pred HHHHh----CCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEecccccc
Q 011766 156 AVELL----GLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMN 231 (478)
Q Consensus 156 ~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (478)
.+... +++..... ...+..+..+.. .... +......+.++.+... +.............
T Consensus 169 ~~~~~~~~~~~r~~~~~---~~~~~~~~~~~~-~~~~-----------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 231 (419)
T 2puz_A 169 VARRLETLRPVRIVTSY---LAAHATPADYKG-RNAD-----------YITDVVLPGLEKAHAE--GLADAVDGFCEGIA 231 (419)
T ss_dssp HHHHHTTTSSCEEEEEE---CCTTCCCGGGTT-CHHH-----------HHHHTHHHHHHHHHHT--TCCSEECCEESTTS
T ss_pred HHHHHhhhcCceEEEEe---cccccCchhhcc-cHHH-----------HHHHHHhhhhhhhhhc--ccccccccccCCCC
Confidence 33222 33332111 111111111100 0000 0000111122222111 11111111122234
Q ss_pred CCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCe
Q 011766 232 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK 311 (478)
Q Consensus 232 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~ 311 (478)
.+++.+.++++.+++.|+++++|+.+.... ...+.....+ ...+.|+.++++++++++++.++.
T Consensus 232 ~~~~~~~~~~~~a~~~g~~v~~H~~~~~~~------------~~~~~~~~~g----~~~~~H~~~~~~~~~~~~~~~g~~ 295 (419)
T 2puz_A 232 FSVKEIDRVFAAAQQRGLPVKLHAEQLSNL------------GGAELAASYN----ALSADHLEYLDETGAKALAKAGTV 295 (419)
T ss_dssp BCHHHHHHHHHHHHHTTCCBEEEESSSSCC------------SHHHHHHHTT----CSEEEECTTCCHHHHHHHHHHTCE
T ss_pred cCHHHHHHHHHHHHHCCCcEEEEecccccC------------CHHHHHHhcC----CceehHhccCCHHHHHHHHHcCCc
Confidence 578899999999999999999999754210 1222222332 234789999999999999999999
Q ss_pred EEECccchhhc--cCCCcHHHHHHCCCcEEEcCCCCCC-CCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHH
Q 011766 312 VSHCPASAMRM--LGFAPIKEMLHADICVSLGTDGAPS-NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 388 (478)
Q Consensus 312 ~~~~p~~~~~~--~~~~~~~~~~~~gv~v~~gsD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~ 388 (478)
++++|..++.. .+..+++.+++.|+++++|||+++. .+..+++..++.+.... ++|+++||++
T Consensus 296 ~~~~p~~~~~l~~~~~~~~~~~~~~Gv~~~lgsD~~~~~~~~~~l~~~~~~~~~~~--------------~ls~~~al~~ 361 (419)
T 2puz_A 296 AVLLPGAFYALREKQLPPVQALRDAGAEIALATDCNPGTSPLTSLLLTMNMGATLF--------------RMTVEECLTA 361 (419)
T ss_dssp EEECHHHHHHHTCCCCCCHHHHHHHTCCEEECCCCCSSSCCBCCHHHHHHHHHHHH--------------CCCHHHHHHH
T ss_pred EEECCchhhhhcccccccHHHHHHCCCeEEEECCCCCCCCccccHHHHHHHhcccc--------------CCCHHHHHHH
Confidence 99999877644 4578999999999999999998653 33457888887654322 4999999999
Q ss_pred HhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEE
Q 011766 389 ATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVM 454 (478)
Q Consensus 389 ~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~ 454 (478)
+|.|||+++|+++++|+|++||+|||||||.+++. .+.+.....+|..||++|++|.
T Consensus 362 ~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~~~~~---------~~~~~~~~~~v~~v~v~G~~v~ 418 (419)
T 2puz_A 362 TTRNAAKALGLLAETGTLEAGKSADFAIWDIERPA---------ELVYRIGFNPLHARIFKGQKVS 418 (419)
T ss_dssp TTHHHHHHTTCTTTSSSCCTTSBCCEEEECCSSTT---------HHHHCBSCCCEEEEEETTEECC
T ss_pred HHHHHHHHcCCCCCccccCCCCcCCEEEECCCchh---------cchhhhcCCceEEEEECCEEcC
Confidence 99999999999888999999999999999997432 2333345578999999999874
No 25
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=100.00 E-value=4.3e-38 Score=312.80 Aligned_cols=383 Identities=19% Similarity=0.166 Sum_probs=236.5
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEE-ECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFV-VQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I-~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~ 95 (478)
...+++|+|++|+|+++. ..+.+++|+| +||||++|++..... ...++++||++|++|+|||||+|+|+......
T Consensus 11 ~~~~~li~n~~i~~~~~~-~~~~~~~v~I~~~g~I~~Vg~~~~~~---~~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~ 86 (458)
T 2p9b_A 11 VEPFALAHATIVTGDKAG-TILRNMTIVVGADGRIEQVAPSIETS---IPAEYHYLDGTGKIVMPGLINAHTHLFSQGKP 86 (458)
T ss_dssp CCCEEEEEEEEECCCTTC-CEEEEEEEEECTTSBEEEEEEGGGCC---CCTTCEEEECTTCEEEECEEEEEECSCC----
T ss_pred CCCcEEEEeeEEEeCCCC-ccccCcEEEEecCCEEEEEeccccCC---CCCCCeEEECCCCEEccceeeeeecccccccc
Confidence 456889999999987543 4556789999 999999999732211 01246899999999999999999999764422
Q ss_pred -cccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC-HHHHHHHHHHhCC----eEEEecc
Q 011766 96 -GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-VSEMAKAVELLGL----RACLVQS 169 (478)
Q Consensus 96 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~-~~~~~~~~~~~g~----~~~~~~~ 169 (478)
....+.....|.....| ...++.+..+........+++++||||+++++... .....+.....+. +......
T Consensus 87 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~g~~~g~r~~~~g~ 164 (458)
T 2p9b_A 87 LNPKLATPKGQRMVATFA--HSPLGKPYMAATVKHNATTLLESGVTTIRTLGDVGYEVVTLRDQIDAGQILGPRILASGP 164 (458)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHTTEEEEEESCCSSSHHHHHHHHHHTTSSCCCEEECCCS
T ss_pred ccccccchhhhhhhhhhh--hhcccccHHHHHHHHHHHHHHHcCCcEEEeCCCCccccHHHHHHHHcCCCCCCeEEeccc
Confidence 11111111111111111 11122233344445577889999999999986532 2223333333343 3332222
Q ss_pred cccCCCCCCC-cccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEe-----cc-----ccccCCHHHHH
Q 011766 170 TMDCGEGLPA-SWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFG-----IR-----QIMNATDRLLL 238 (478)
Q Consensus 170 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~l~ 238 (478)
.+....+... .+.. .... ..+..+.+++....+...++++.. +. ..+.++++.+.
T Consensus 165 ~~~~~g~~~~~~~~~--~~~~------------~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~~~~~~~~~~~~l~ 230 (458)
T 2p9b_A 165 LMAIPEGHGAPLIAL--TSGT------------PEEARTAVAQNLKAGVNAIKIAATGGVTDAQEIGEAGSPQMSVEQMR 230 (458)
T ss_dssp CEECCCSSCCCCEEC--CSCC------------HHHHHHHHHHHHHTTCSCEEEECSCCTTSCCCC------CCCHHHHH
T ss_pred ccccCCCCCccccCc--cCCC------------HHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccCCCCCCcCCHHHHH
Confidence 1111000000 0000 0000 013334444443444556776542 11 23457889999
Q ss_pred HHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHH------hcCCeE
Q 011766 239 ETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLS------RAGVKV 312 (478)
Q Consensus 239 ~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~------~~~~~~ 312 (478)
++++.|++.|+++.+|+.+..... ..+. .+ ...+.|+.+++++.+++++ +.|+.+
T Consensus 231 ~~~~~a~~~g~~v~~H~~~~~~i~--------------~~~~-~G----~~~i~H~~~~~~~~~~~~~~~~~~~~~g~~v 291 (458)
T 2p9b_A 231 AICDEAHQYGVIVGAHAQSPEGVR--------------RSLL-AG----VDTIEHGSVLDDELIGMFRHNPNALRGYSAL 291 (458)
T ss_dssp HHHHHHHHTTCCEEEEECSHHHHH--------------HHHH-HT----CSEEEECCCCCHHHHHHHHCCTTSTTSCCEE
T ss_pred HHHHHHHHCCCeEEEEeCCHHHHH--------------HHHH-cC----CCEEEECCCCCHHHHHHHhcccccccCCeEE
Confidence 999999999999999997533211 1111 12 2357999999999999999 899765
Q ss_pred EECccc--hhh-c------cC----------------CCcHHHHHHCCCcEEEcCCCCC-CCCCcCHHHHHHHHHHHhcc
Q 011766 313 SHCPAS--AMR-M------LG----------------FAPIKEMLHADICVSLGTDGAP-SNNRMSIVDEMYLASLINKG 366 (478)
Q Consensus 313 ~~~p~~--~~~-~------~~----------------~~~~~~~~~~gv~v~~gsD~~~-~~~~~~~~~~~~~~~~~~~~ 366 (478)
+|.. +.. . .+ ..+++.++++|+++++|||++. .....+++.+++.....
T Consensus 292 --~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gtD~~~~~~~~~~~~~e~~~~~~~--- 366 (458)
T 2p9b_A 292 --IPTLSAGLPLTLLGQDVTGITDIQLENSKNVVGGMVSGARQAHEAGLMIGVGTDTGMTFVPQYATWRELELLVAY--- 366 (458)
T ss_dssp --ECCHHHHHHHHHSCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCCCTTSTTSCTTCHHHHHHHHHHH---
T ss_pred --EeecchhhHHHhhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEecCCCCCCCccccHHHHHHHHHHh---
Confidence 3443 210 0 01 2467789999999999999743 22334567666543211
Q ss_pred cccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEE
Q 011766 367 REVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSV 446 (478)
Q Consensus 367 ~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v 446 (478)
.++|++++++++|.|||+++|+++++|+|++||.|||||+|.+++. ++ ..+ .+|..|
T Consensus 367 -----------~~ls~~~al~~~T~~~A~~lgl~~~~Gsi~~Gk~ADlvvld~~p~~-----~~-~~~------~~v~~v 423 (458)
T 2p9b_A 367 -----------AGFSPAEALHAATAVNASILGVDAETGSLEVGKSADLLVLNANPLD-----DL-RAL------EHPALV 423 (458)
T ss_dssp -----------HCCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTT-----CG-GGG------TSCSEE
T ss_pred -----------cCCCHHHHHHHHHHHHHHHhCCcCCCCccCCCCcCCEEEECCCchh-----CH-HHh------ccceEE
Confidence 1599999999999999999999888999999999999999998542 32 111 489999
Q ss_pred EEccEEEEEC--CeeecccHHH
Q 011766 447 MCNGQWVMKN--KKILLLMRGR 466 (478)
Q Consensus 447 ~v~G~~v~~~--g~~~~~~~~~ 466 (478)
|++|++|+++ +++...+...
T Consensus 424 ~v~G~~v~~~~~~~~~~~d~~~ 445 (458)
T 2p9b_A 424 IAAGHPVWRPGPKRFADIDALL 445 (458)
T ss_dssp EETTEECCSCCCCCCHHHHHHH
T ss_pred EECCEEEecCchhhhhhHhHHH
Confidence 9999999999 8887776543
No 26
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=100.00 E-value=1.1e-37 Score=305.61 Aligned_cols=364 Identities=13% Similarity=0.136 Sum_probs=236.7
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~ 96 (478)
++++++|+|++|+++++. .... ++|+|+||||++|++. . + .++++||++|++|+|||||+|+|+. ..
T Consensus 4 ~~~~~~i~n~~v~~~~~~-~~~~-~~v~I~~g~I~~ig~~-~-----~-~~~~viD~~g~~v~PGlID~H~H~~-~~--- 70 (408)
T 3be7_A 4 TSEDFLIKSKGYLDIQTG-EIIK-ADLLIRNGKIAEIGKI-N-----T-KDATVISIPDLILIPGLMDSHVHIV-GN--- 70 (408)
T ss_dssp -CCCEEEEEEEEECTTTC-CEEC-CEEEEETTEEEEEECC-C-----C-SSSEEEEEEEEEEEECEEEEEECCS-SC---
T ss_pred ccceEEEEeeEEEeCCCC-ceee-eEEEEECCEEEEEeCC-C-----C-CCCeEEECCCCEECcCceeeeEccc-CC---
Confidence 356799999999976542 3455 8999999999999975 1 1 2568999999999999999999985 21
Q ss_pred ccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC-HHHHHHHHHHhCC----eEEEecccc
Q 011766 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-VSEMAKAVELLGL----RACLVQSTM 171 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~-~~~~~~~~~~~g~----~~~~~~~~~ 171 (478)
....| .. -..++++.+........+++++||||++++++.. .....+.....+. +.+.....+
T Consensus 71 -----~~~~~-~~------~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 138 (408)
T 3be7_A 71 -----DSKGE-ES------IADSSHMGTVWGVVNAEKTLMAGFTTVRNVGAANYADVSVRDAIERGVINGPTMLVSGPAL 138 (408)
T ss_dssp -----CCCSG-GG------TTCCTHHHHHHHHHHHHHHHTTTEEEEEECCCSTTHHHHHHHHHHTTSSCCCEEEECCSCB
T ss_pred -----CCcch-hh------hcCCHHHHHHHHHHHHHHHHHcCCCEEEeCCCccccCHHHHHHHHCCCCCCCEEEEcccee
Confidence 11122 11 0134455555556678889999999999987533 2223333444443 443322111
Q ss_pred --cCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEe-----cc---ccccCCHHHHHHHH
Q 011766 172 --DCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFG-----IR---QIMNATDRLLLETR 241 (478)
Q Consensus 172 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~~~l~~~~ 241 (478)
..++...+.+.... ..+.. .......+..+.+++....+...++.+.. .. +.+..+++.+.+++
T Consensus 139 ~~~g~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~ 212 (408)
T 3be7_A 139 GITGGHCDHNLLPPEF----NYSSE--GVVDSPWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIV 212 (408)
T ss_dssp BCTTSTTSCCCSCTTT----CCCCT--TBCCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTSBCSCHHHHHHHH
T ss_pred eccCCCCccccccccc----cccCC--cccCCHHHHHHHHHHHHhcCCCEEEEEecCCcCCCCCCCCCCCCCHHHHHHHH
Confidence 11111001100000 00000 00011124444555443444455665431 11 23567889999999
Q ss_pred HHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhh
Q 011766 242 DMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMR 321 (478)
Q Consensus 242 ~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 321 (478)
+.|++.|+++.+|+.+..... ..+ ..+ ...+.|+.+++++.++++++.|+.++.++.....
T Consensus 213 ~~A~~~g~~v~~H~~~~~~i~--------------~~~-~~g----~~~i~H~~~~~~~~i~~~~~~g~~v~~~~~~~~~ 273 (408)
T 3be7_A 213 DEAHNHGMKVAAHAHGLIGIK--------------AAI-KAG----VDSVEHASFIDDETIDMAIKNNTVLSMDIFVSDY 273 (408)
T ss_dssp HHHHHTTCEEEEEECSHHHHH--------------HHH-HHT----CSEEEECTTCCHHHHHHHHHTTCEEECCCSTHHH
T ss_pred HHHHHCCCEEEEEeCCHHHHH--------------HHH-HcC----CCEEEECCCCCHHHHHHHHHCCCEEeeeecHHHH
Confidence 999999999999997643211 111 122 1468999999999999999999887665432110
Q ss_pred c----------------------cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCC
Q 011766 322 M----------------------LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAA 379 (478)
Q Consensus 322 ~----------------------~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (478)
. ....+++.++++|+++++|||+++. +..+++.+++... . .+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gTD~~~~-p~~~~~~~~~~~~--~-------------~g 337 (408)
T 3be7_A 274 ILGEGAKAGIREESLNKERLVGKKQRENFMNAHRRGAIITFGTDAGIF-DHGDNAKQFAYMV--E-------------WG 337 (408)
T ss_dssp HHTTTTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTCCEECCCCBTTB-CTTCGGGHHHHHH--H-------------TT
T ss_pred hhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC-CCchHHHHHHHHH--H-------------cC
Confidence 0 0125678889999999999998642 2334566665422 1 15
Q ss_pred CCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCee
Q 011766 380 LPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKI 459 (478)
Q Consensus 380 ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~ 459 (478)
+|++++++++|.|||+++|++ ++|+|++||+|||||+|.+++. |+ ..+ .+|..||++|++|+++.-+
T Consensus 338 ls~~~al~~~T~n~A~~lgl~-~~G~i~~G~~ADlvvld~~p~~-----~~-~~~------~~v~~v~~~G~~v~~~~~~ 404 (408)
T 3be7_A 338 MTPLEAIQASTIKTATLFGIE-NIGQIKEGFDADIVGVIENPLA-----NI-RTL------EEVAFVMKEGKVYKREGHH 404 (408)
T ss_dssp CCHHHHHHTTTHHHHHHHTCS-SCSSCCTTSBCCEEEESSCTTT-----CG-GGT------TSCCEEEETTEEEEECCC-
T ss_pred CCHHHHHHHHHHHHHHHhCCC-cccccCCCCccCEEEECCCchh-----hH-HHh------hceeEEEECCEEEeccccc
Confidence 999999999999999999997 7899999999999999998543 32 211 4799999999999987643
No 27
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=100.00 E-value=1.1e-37 Score=306.35 Aligned_cols=366 Identities=18% Similarity=0.197 Sum_probs=235.8
Q ss_pred CccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCC--eEEeCCCCEEeecccccccccchhh
Q 011766 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMAD--QIIDLQSQILLPGFVNTHVHTSQQL 93 (478)
Q Consensus 16 ~~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~--~viD~~G~~v~PGfID~H~H~~~~~ 93 (478)
.+.++++|+|++|+++++. .++.+++|+|+||+|++|++.. . ..++ ++||++|++|+|||||+|+|+....
T Consensus 4 ~~~~~~li~n~~v~~~~~~-~~~~~~~v~I~~g~I~~vg~~~-~-----~~~~~~~viD~~g~~v~PGlID~H~H~~~~~ 76 (418)
T 2qs8_A 4 DVDSKTLIHAGKLIDGKSD-QVQSRISIVIDGNIISDIKKGF-I-----SSNDFEDYIDLRDHTVLPGLMDMHVHFGQEY 76 (418)
T ss_dssp ---CCEEEEEEEECCSSCS-SCEEEEEEEEETTEEEEEEESC-C-----CCTTSSEEEEEEEEEEEECEEEEEECTTCCC
T ss_pred CCCccEEEEeeEEEeCCCC-ccccCcEEEEECCEEEEEeCCC-C-----CCCCcceEEECCCCEECCCeeeeeeccccCC
Confidence 4567899999999987643 4557789999999999999753 1 1245 8999999999999999999995431
Q ss_pred hccccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC-HHHHHHHHHHhCC----eEEEec
Q 011766 94 AKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-VSEMAKAVELLGL----RACLVQ 168 (478)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~-~~~~~~~~~~~g~----~~~~~~ 168 (478)
.+..| . .-..++++.+........+++++||||+++++... .....+.....|. +.+...
T Consensus 77 --------~~~~~-~------~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~g~~~~~r~~~~~ 141 (418)
T 2qs8_A 77 --------QSKAQ-A------PIKVEREMQAILATQHAYVTFKSGFTTVRQVGDSGLVAISLRDAINSGKLAGPRIFAAG 141 (418)
T ss_dssp --------CCTTT-S------CSCCCHHHHHHHHHHHHHHHHHTTEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEECC
T ss_pred --------CCCch-h------hhcCCHHHHHHHHHHHHHHHHHcCCCEEEeCCCCccccHHHHHHHHCCCCCCCeEEecC
Confidence 11223 0 01234555555556678899999999999986432 2223333444443 554433
Q ss_pred ccc--cCCCCC-CCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEe-----cc---ccccCCHHHH
Q 011766 169 STM--DCGEGL-PASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFG-----IR---QIMNATDRLL 237 (478)
Q Consensus 169 ~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~~~l 237 (478)
..+ ..++.. .+.+...... . +...........+..+.+++....+...++++.. .+ +.+..+++.+
T Consensus 142 ~~~~~~g~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l 218 (418)
T 2qs8_A 142 KTIATTGGHADPTNGKAVDDYD-Y--PVPEQGVVNGPYEVYAAVRQRYKDGADGIKITVTGGVLSVAKSGQNPQFTQEEV 218 (418)
T ss_dssp SCBEETTCTTCTTTTCCGGGCC-C--CCGGGTEECSHHHHHHHHHHHHHHTCSEEEEECBCCSSSSSSCSSCBCSCHHHH
T ss_pred ccccccCCCccccccccccccc-c--ccccccccCCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCCCcccCCHHHH
Confidence 222 111111 0000000000 0 0000000011123444444332233456666532 11 2356789999
Q ss_pred HHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECcc
Q 011766 238 LETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPA 317 (478)
Q Consensus 238 ~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~ 317 (478)
.++++.|++.|+++.+|+.+...... .+. .+ ...+.|+.++++++++++++.|+.+. |.
T Consensus 219 ~~~~~~A~~~g~~v~~H~~~~~~i~~--------------~~~-~g----~~~i~H~~~~~~~~i~~l~~~gv~v~--p~ 277 (418)
T 2qs8_A 219 DAVVSAAKDYGMWVAVHAHGAEGMKR--------------AIK-AG----VDSIEHGTFMDLEAMDLMIENGTYYV--PT 277 (418)
T ss_dssp HHHHHHHHHTTCEEEEEECSHHHHHH--------------HHH-HT----CSEEEECTTCCHHHHHHHHHHTCEEE--CC
T ss_pred HHHHHHHHHcCCEEEEEECCHHHHHH--------------HHH-cC----CCEEEECCCCCHHHHHHHHHCCCEEe--ee
Confidence 99999999999999999975432111 111 12 24689999999999999999998654 54
Q ss_pred ch----hhc----cC-----------------CCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccC
Q 011766 318 SA----MRM----LG-----------------FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFAN 372 (478)
Q Consensus 318 ~~----~~~----~~-----------------~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (478)
.. +.. .+ ..+++.+++.|+++++|||++. .+..+++.+++....
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gTD~~~-~~~~~~~~e~~~~~~---------- 346 (418)
T 2qs8_A 278 ISAGEFVAEKSKIDNFFPEIVRPKAASVGPQISDTFRKAYEKGVKIAFGTDAGV-QKHGTNWKEFVYMVE---------- 346 (418)
T ss_dssp HHHHHHHHHHTTSTTSSCTTTHHHHHHHHHHHHHHHHHHHHHTCCBCCCCCBTT-BCTTCTTHHHHHHHH----------
T ss_pred echHHHhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeCCCCc-CCcchHHHHHHHHHH----------
Confidence 21 100 12 2357889999999999999854 233456777664321
Q ss_pred CCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEE
Q 011766 373 GTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQW 452 (478)
Q Consensus 373 ~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~ 452 (478)
.++|++++++++|.|||+++|+++++|+|++||.|||||+|.+++. |+ .. ..+|..||++|++
T Consensus 347 -----~gls~~eal~~~T~n~A~~lg~~~~~G~l~~G~~ADlvvld~~~~~-----~~-~~------~~~i~~v~~~G~~ 409 (418)
T 2qs8_A 347 -----NGMPAMKAIQSATMETAKLLRIEDKLGSIESGKLADLIAVKGNPIE-----DI-SV------LENVDVVIKDGLL 409 (418)
T ss_dssp -----TTCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTT-----CG-GG------GGGEEEEEETTEE
T ss_pred -----cCCCHHHHHHHHHHHHHHHhCCCCCCcccCCCCccCEEEECCChhh-----CH-HH------hcCccEEEECCEE
Confidence 2599999999999999999999888999999999999999998543 32 21 2589999999997
Q ss_pred EEE
Q 011766 453 VMK 455 (478)
Q Consensus 453 v~~ 455 (478)
+..
T Consensus 410 ~~~ 412 (418)
T 2qs8_A 410 YEG 412 (418)
T ss_dssp EEC
T ss_pred Eec
Confidence 763
No 28
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=100.00 E-value=4.7e-38 Score=306.30 Aligned_cols=364 Identities=18% Similarity=0.219 Sum_probs=226.0
Q ss_pred cceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccc
Q 011766 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~ 97 (478)
+++++|+|++|+++++ .... ++|+|+||+|++|++..+ ..++++||++|++|+|||||+|+|+.......
T Consensus 4 ~~~~~i~~~~i~~~~~--~~~~-~~v~i~~g~I~~i~~~~~------~~~~~~id~~g~~~~Pg~~d~h~h~~~~~~~~- 73 (396)
T 3ooq_A 4 SVKILFKNATVFPITS--RPFK-GDVLVSNGKVEKVGENIE------DPDAEIVDLTGKFLFPGFVDAHSHIGLFEEGV- 73 (396)
T ss_dssp --CEEEEEEEECCSSS--CCEE-EEEEEETTEEEEEESCCC------CTTSEEEECTTCEEEECEEEEEECTTTSCTTS-
T ss_pred cceEEEECcEEEeCCC--CeEE-eEEEEECCEEEEecCCCC------CCCCeEEECCCCEEecCEEecccccCccccCc-
Confidence 4678999999997664 3444 899999999999997643 13678999999999999999999997654311
Q ss_pred cCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCH-------------HHHHHHH--HHhCC
Q 011766 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV-------------SEMAKAV--ELLGL 162 (478)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~-------------~~~~~~~--~~~g~ 162 (478)
....+|+....++..+.+...+.+........+++++|||+++++.+... ....... ...++
T Consensus 74 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~gs~~~i~G~~~~~~~~~~~~~~~~~~~~~~i 150 (396)
T 3ooq_A 74 ---GYYYSDGNEATDPVTPHVKALDGFNPQDPAIERALAGGVTSVMIVPGSANPVGGQGSVIKFRSIIVEECIVKDPAGL 150 (396)
T ss_dssp ---CGGGCCSCCTTCSBCTTCBGGGGCCTTCHHHHHHHTTTEEEEEECCCSSSSEEEEEEEEESCCSSHHHHEEEEEEEE
T ss_pred ---cccccccccccCccCccccHhhhcCcCcHHHHHHHhCCeEEEeccCCCCCcccCeeEEEeccCCCHHHceecCCcEE
Confidence 11134555556677777777766665556777899999999999743210 0000000 00111
Q ss_pred eEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHH---hcCCCCCCeEEEEeccccccCCHHHHHH
Q 011766 163 RACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAK---HHHAADGRIRIWFGIRQIMNATDRLLLE 239 (478)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 239 (478)
+...+.... ...... ...+..... .....++.++. +..... ......+++..+....+.
T Consensus 151 ~~~~g~~~~--------~~~~~~---~~~p~~~~~---~~~~l~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~e~--- 212 (396)
T 3ooq_A 151 KMAFGENPK--------RVYGER---KQTPSTRMG---TAGVIRDYFTKVKNYMKKKE-LAQKEGKEFTETDLKMEV--- 212 (396)
T ss_dssp EEECSHHHH--------HHHHHT---TCSCSSHHH---HHHHHHHHHHHHHHHHHHHH-HHHHTTCCCCCCCHHHHH---
T ss_pred EEEcCCCCc--------cccccc---CCCCccHHH---HHHHHHHHHHHHHHHHHhhh-hhhhccCCCCCcChhHHH---
Confidence 111110000 000000 000000000 00011111111 100000 000001222222223333
Q ss_pred HHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccc-
Q 011766 240 TRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPAS- 318 (478)
Q Consensus 240 ~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~- 318 (478)
+..+.+.++++.+|+.+...... .+..+...+ .+..+.|+....+ .++++++.|+.+++||..
T Consensus 213 -l~~~~~~~~~v~iHa~~~~~i~~-----------~~~~~~~~g---~~~~i~H~~~~~~-~~~~l~~~gv~v~~~P~~~ 276 (396)
T 3ooq_A 213 -GEMVLRKKIPARMHAHRADDILT-----------AIRIAEEFG---FNLVIEHGTEAYK-ISKVLAEKKIPVVVGPLLT 276 (396)
T ss_dssp -HHHHHTTSSCEEEEECSHHHHHH-----------HHHHHHHHT---CCEEEEECTTGGG-GHHHHHHHTCCEEECCCSS
T ss_pred -HHHHHcCCCcEEEEECchhHHHH-----------HHHHHHHcC---CCEEEecCchHHH-HHHHHHHCCCCEEECcccc
Confidence 33345789999999977553221 233444443 4678999998765 599999999999999953
Q ss_pred ---hhhc--cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHH
Q 011766 319 ---AMRM--LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATING 393 (478)
Q Consensus 319 ---~~~~--~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~p 393 (478)
+... .+..+++.++++|++++++||++... ...+...+..+ . ..+++++++++++|.||
T Consensus 277 ~~~~~~~~~~~~~~~~~l~~~Gv~v~lgtD~~~~~-~~~l~~~~~~~---~------------~~gl~~~~al~~~T~n~ 340 (396)
T 3ooq_A 277 FRTKLELKDLTMETIAKLLKDGVLIALMCDHPVIP-LEFATVQAATA---M------------RYGAKEEDLLKILTVNP 340 (396)
T ss_dssp CCCSGGGTTCCTTHHHHHHHTTCCEEECCTTTTSC-GGGHHHHHHHG---G------------GGTCCHHHHHHTTTHHH
T ss_pred cccchhHHhhhhHHHHHHHHCCCEEEEEcCCCccC-ccHHHHHHHHH---H------------HcCCCHHHHHHHHHHHH
Confidence 3333 45679999999999999999986432 22222222111 1 13699999999999999
Q ss_pred HHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCee
Q 011766 394 AKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKI 459 (478)
Q Consensus 394 A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~ 459 (478)
|+++|+++++|+|++|+.|||||+|.+++.. ..+|..||++|++|+++.+-
T Consensus 341 A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~---------------~~~v~~v~~~G~~v~~~~~~ 391 (396)
T 3ooq_A 341 AKILGLEDRIGSIEPGKDADLVVWSGHPFDM---------------KSVVERVYIDGVEVFRREGH 391 (396)
T ss_dssp HHHTTCTTTSSSCCTTSBCCEEEESSCTTST---------------TCCEEEEEETTEEEEECC--
T ss_pred HHHhCCCCCeeeECCCCcCCEEEECCCcccc---------------ccceeEEEECCEEEeCCCCc
Confidence 9999999889999999999999999986542 25899999999999997653
No 29
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=100.00 E-value=3.7e-36 Score=292.40 Aligned_cols=354 Identities=17% Similarity=0.132 Sum_probs=224.5
Q ss_pred cceeEEEecEE-EeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCC-CeEEeCCCCEEeecccccccccchhhhc
Q 011766 18 SSTMILHNAVI-VTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMA-DQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (478)
Q Consensus 18 ~~~~~i~n~~I-~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~-~~viD~~G~~v~PGfID~H~H~~~~~~~ 95 (478)
|++++|+|++| +++++...++.+++|+|+||+|++|++..... ..+ .++||++|++|+|||||+|+|+...
T Consensus 1 m~~~li~n~~v~~~~~~~~~~~~~~~v~I~~g~I~~Ig~~~~~~----~~~~~~viD~~g~~v~PGlID~H~H~~~~--- 73 (386)
T 2vun_A 1 MSKTIIKNIGKIVSGDIKSPVLQADTIVVEDGLIAAIGGEELMK----DAGDATIIDAAGSTVTPGLLDTHVHVSGG--- 73 (386)
T ss_dssp -CEEEEESCSEEECSCTTSCEECCSEEEEETTEEEEEESGGGGT----TCTTCEEEECTTCEEEECEEEEEECCCST---
T ss_pred CccEEEeccEEEEcCCCCccccccceEEEECCEEEEecCccccC----CCCCceEEcCCCCEEccceeeccccccCC---
Confidence 35789999999 97654323467889999999999999742211 123 5899999999999999999999421
Q ss_pred cccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCc-----cC--HHHHH--HHHHH---hCCe
Q 011766 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QH--VSEMA--KAVEL---LGLR 163 (478)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~-----~~--~~~~~--~~~~~---~g~~ 163 (478)
+|. + +........+++++||||+++++. .. ...+. ..... .+.+
T Consensus 74 ---------~~~------------~---~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (386)
T 2vun_A 74 ---------DYA------------P---RQKTMDFISSALHGGVTTMISAGSPHFPGRPKDAAGTKALAITLSKSYYNAR 129 (386)
T ss_dssp ---------TEE------------G---GGTEESHHHHHHTTTEEEEEECCCTTSTTCCCSHHHHHHHHHHHHHHHHHCC
T ss_pred ---------CcC------------h---hHHHHHHHHHHHhCCceEEEeccccccCCChhhHHHHHHHHHHhhccccccc
Confidence 111 0 000011356689999999999652 11 11111 11111 1110
Q ss_pred EEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHH
Q 011766 164 ACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDM 243 (478)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 243 (478)
..++.+..... ... ... .. +.+++....+...++.+.. . ..++++.+.++++.
T Consensus 130 --------~~~~~~~~g~~-~~~-~~~-------------~~-~~~~~~~~~g~~~ik~~~~-~--~~~~~~~l~~~~~~ 182 (386)
T 2vun_A 130 --------PAGVKVHGGAV-ILE-KGL-------------TE-EDFIEMKKEGVWIVGEVGL-G--TIKNPEDAAPMVEW 182 (386)
T ss_dssp --------GGGCEEECCEE-CCC-TTC-------------CH-HHHHHHHHTTCCEEEEETS-S--SCCSHHHHHHHHHH
T ss_pred --------ccceeeccCcc-ccc-CCc-------------CH-HHHHHHHHhCCCeEEEeec-C--CCCCHHHHHHHHHH
Confidence 00000000000 000 000 11 2222322334455654321 1 12578899999999
Q ss_pred HHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeecc----CChhHHHHHHhcCCeEEECccch
Q 011766 244 AREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW----VNHTEIGLLSRAGVKVSHCPASA 319 (478)
Q Consensus 244 a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~----~~~~~~~~~~~~~~~~~~~p~~~ 319 (478)
|++.|+++.+|+.+...... ....+......+. + .+.|+.. ++++.++++++.|+.+..++...
T Consensus 183 a~~~g~~v~~H~~~~~~~~~--------~~~~i~~~~~~G~---~-~i~H~~~~~~~~~~~~~~~~~~~g~~vl~~~~~g 250 (386)
T 2vun_A 183 AHKHGFKVQMHTGGTSIPGS--------STVTADDVIKTKP---D-VVSHINGGPTAISVQEVDRIMDETDFAMEIVQCG 250 (386)
T ss_dssp HHHTTCEEEEECSCCSCSTT--------CSCCHHHHHHHCC---S-EEETTTCSSSCCCHHHHHHHHHHCCCEEEEESSS
T ss_pred HHHCCCeEEEecCCcccccc--------CHHHHHHHHHcCC---C-EEEEccCCCCCCCHHHHHHHHHcCCeEEEeccCC
Confidence 99999999999974321100 0011222222332 2 4799988 88999999999998773332211
Q ss_pred hhccCCCcHHHHHHCCC--cEEEcCCCC-CC--CCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHH
Q 011766 320 MRMLGFAPIKEMLHADI--CVSLGTDGA-PS--NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGA 394 (478)
Q Consensus 320 ~~~~~~~~~~~~~~~gv--~v~~gsD~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA 394 (478)
.......+++.+++.|+ +++++||++ .. .....+..+++... ..++|++++++++|.|||
T Consensus 251 ~~~~~~~~~~~~~~~g~~d~v~lgTD~p~~~~~~~~g~~~~~~~~~~---------------~~~ls~~~~~~~~T~n~A 315 (386)
T 2vun_A 251 NPKIADYVARRAAEKGQLGRVIFGNDAPSGTGLIPLGILRNMCQIAS---------------MSDIDPEVAVCMATGNST 315 (386)
T ss_dssp CHHHHHHHHHHHHHHTCGGGEEEECCBSBTTBBCTTHHHHHHHHHHH---------------HSCCCHHHHHHHHTHHHH
T ss_pred cccccHHHHHHHHHcCCCceeEEecCCCCCCCCCcchhHHHHHHHHh---------------hcCCCHHHHHHHHhHHHH
Confidence 02234567889999999 999999984 21 11223344443221 125999999999999999
Q ss_pred HHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeec
Q 011766 395 KSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILL 461 (478)
Q Consensus 395 ~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~ 461 (478)
+++|+ ++|+|++|++|||||+|.++. .+..+++..+.+ ....+|..||++|++|+++|+...
T Consensus 316 ~~lgl--~~G~i~~G~~ADlvv~d~~~~--~~~~~~~~~~~~-~~~~~v~~v~v~G~~v~~~~~~~~ 377 (386)
T 2vun_A 316 AVYGL--NTGVIAPGKEADLIIMDTPLG--SVAEDAMGAIAA-GDIPGISVVLIDGEAVVTKSRNTP 377 (386)
T ss_dssp HHHTC--SCSSCSTTSBCCEEEEECBTT--CSCSSHHHHHHH-TCCCEEEEEEETTEEEESSCSSSC
T ss_pred HHcCC--CceeeCCCCeeCEEEECCCcc--cccchhHHHhhc-cCCCceeEEEECCEEEeecCcCCC
Confidence 99999 479999999999999999864 356677777766 445689999999999999998876
No 30
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=5.1e-37 Score=305.44 Aligned_cols=373 Identities=17% Similarity=0.168 Sum_probs=225.1
Q ss_pred cceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccc
Q 011766 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~ 97 (478)
|++++|+|++|++++ .. .+++|+|+||+|++|++..+. ..+.++||++|++|+|||||+|+|+.....
T Consensus 1 m~~~li~~~~v~~~~---~~-~~~~v~I~~g~I~~ig~~~~~-----~~~~~viD~~g~~v~PGlID~H~H~~~~~~--- 68 (458)
T 1gkr_A 1 MFDVIVKNCRLVSSD---GI-TEADILVKDGKVAAISADTSD-----VEASRTIDAGGKFVMPGVVDEHVHIIDMDL--- 68 (458)
T ss_dssp CEEEEEEEEEEEETT---EE-EEEEEEEETTEEEEEESCCTT-----CCEEEEEECTTCEEEECEEEEEEECCCGGG---
T ss_pred CceEEEECcEEECCC---Cc-eeeeEEEECCEEEEecCCCCC-----CCCCeEEeCCCCEEecCEEEeeecccCCCC---
Confidence 357899999999754 22 678999999999999975321 123579999999999999999999953210
Q ss_pred cCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCC-ccC----HHH----HHHHHHHhCCeEEEec
Q 011766 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQH----VSE----MAKAVELLGLRACLVQ 168 (478)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~-~~~----~~~----~~~~~~~~g~~~~~~~ 168 (478)
+ . +.++. ....+.++++||||+++++ ... ... ..+.....++....
T Consensus 69 --------------~--~---~~~~~----~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 123 (458)
T 1gkr_A 69 --------------K--N---RYGRF----ELDSESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQRLKVDFAL-- 123 (458)
T ss_dssp --------------T--T---TSCCH----HHHHHHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEE--
T ss_pred --------------C--C---chhHH----HHHHHHHHcCCEEEEEeCCCCCCCCCCcHHHHHHHHHHhhhCceeEEE--
Confidence 0 0 01111 1233457899999999976 321 111 11222222221110
Q ss_pred ccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccc---cccCCHHHHHHHHHHHH
Q 011766 169 STMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQ---IMNATDRLLLETRDMAR 245 (478)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~a~ 245 (478)
.. + . ...... +..++++ .+...++++..++. .+..+.+.+.++++.++
T Consensus 124 --~~-~--~--------~~~~~~------------~~~~~~~----~g~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~a~ 174 (458)
T 1gkr_A 124 --YG-G--G--------VPGNLP------------EIRKMHD----AGAVGFKSMMAASVPGMFDAVSDGELFEIFQEIA 174 (458)
T ss_dssp --EE-E--C--------CTTCHH------------HHHHHHH----TTCCEEEEESSCSBTTTBCBCCHHHHHHHHHHHH
T ss_pred --Ee-c--c--------CCCCHH------------HHHHHHH----cCCcEEEEeecccCCCCcccCCHHHHHHHHHHHH
Confidence 00 0 0 000011 3333332 23445665555443 35678999999999999
Q ss_pred HcCCceeEeccCChhhhHH--HhhhcCCCCchHHHH------------hh----hCCCCCCeeeeeeccCCh-hHHHHHH
Q 011766 246 EFKTGIHMHVAEIPYENQV--VMDTRKVDHGTVTFL------------DK----IEFLQNNLLSAHTVWVNH-TEIGLLS 306 (478)
Q Consensus 246 ~~~~~v~~H~~~~~~~~~~--~~~~~~~~~~~~~~l------------~~----~~~~~~~~~i~h~~~~~~-~~~~~~~ 306 (478)
++++++++|+.+....... .....+.. .....+ .. ....+. ..|++|++. .+++.+.
T Consensus 175 ~~g~~v~~H~~~~~~~~~~~~~~~~~G~~-~~~~h~~~~~~~~~~~~~~~~~~la~~~g~---~~h~~H~~~~~~~~~i~ 250 (458)
T 1gkr_A 175 ACGSVIVVHAENETIIQALQKQIKAAGGK-DMAAYEASQPVFQENEAIQRALLLQKEAGC---RLIVLHVSNPDGVELIH 250 (458)
T ss_dssp HHTCEEEEECCCHHHHHHHHHHHHHTTCC-SHHHHHHHSCHHHHHHHHHHHHHHHHHHCC---EEEECCCCSHHHHHHHH
T ss_pred HcCCEEEEECCCHHHHHHHHHHHhhcCcc-chhhccccCCHHHHHHHHHHHHHHHHHhCC---CEEEEeCCCHHHHHHHH
Confidence 9999999999653322111 11111110 011111 11 111122 235555553 4455444
Q ss_pred ---hcC--CeEEECccchhh-----------cc---------CCCcHHHHHHCCCcEEEcCCCCCCCCC------cCHHH
Q 011766 307 ---RAG--VKVSHCPASAMR-----------ML---------GFAPIKEMLHADICVSLGTDGAPSNNR------MSIVD 355 (478)
Q Consensus 307 ---~~~--~~~~~~p~~~~~-----------~~---------~~~~~~~~~~~gv~v~~gsD~~~~~~~------~~~~~ 355 (478)
+.| +.+.+||..... .. ...++.++++.|+.+++|||+.+.... .+++.
T Consensus 251 ~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~~~~~pp~r~~~~~~~l~~~~~~G~~~~lgtD~~~~~~~~k~~g~~~~~~ 330 (458)
T 1gkr_A 251 QAQSEGQDVHCESGPQYLNITTDDAERIGPYMKVAPPVRSAEMNIRLWEQLENGLIDTLGSDHGGHPVEDKEPGWKDVWK 330 (458)
T ss_dssp HHHHTTCCEEEEECHHHHSCCGGGHHHHGGGGCCSSCCCCHHHHHHHHHHHHHTCCCEECCCEECCCGGGTGGGGTCGGG
T ss_pred HHHHCCCcEEEEEchHHheeCHHHhhccCceEEEcCCCCCHHHHHHHHHHHhCCCceEEEeCCCCCChHHhccccCCHhH
Confidence 366 567778864210 01 122456788999999999998655322 23333
Q ss_pred --------HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCc
Q 011766 356 --------EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPV 427 (478)
Q Consensus 356 --------~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~ 427 (478)
++......... ....++|++++++++|.|||+++|+++++|+|++|++|||||+|.+.....+.
T Consensus 331 ~~~~~~g~~~~l~~~~~~~--------~~~~~l~~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~ 402 (458)
T 1gkr_A 331 AGNGALGLETSLPMMLTNG--------VNKGRLSLERLVEVMCEKPAKLFGIYPQKGTLQVGSDADLLILDLDIDTKVDA 402 (458)
T ss_dssp SCCCBCCTTTHHHHHHHHT--------GGGTSSCHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEEESCCCEECCG
T ss_pred CCCCcccHHHHHHHHHHHH--------HHhCCCCHHHHHHHHhhhHHHHhCCCCCCccCCCCCcCCEEEEcCCcceEEcH
Confidence 12222222110 01236999999999999999999998788999999999999999986544444
Q ss_pred CChhhhhhhccC-----CCCeeEEEEccEEEEECCeeecccH-HHHH
Q 011766 428 HDRITSLVYCMR-----TENVVSVMCNGQWVMKNKKILLLMR-GRLF 468 (478)
Q Consensus 428 ~d~~~~~~~~~~-----~~~v~~v~v~G~~v~~~g~~~~~~~-~~~~ 468 (478)
.++.+...+... ..+|..||++|++||++|++++... |+++
T Consensus 403 ~~~~~~~~~~~~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~ 449 (458)
T 1gkr_A 403 SQFRSLHKYSPFDGMPVTGAPVLTMVRGTVVAEKGEVLVEQGFGQFV 449 (458)
T ss_dssp GGCSSSCCCCTTTTCEECCEEEEEEETTEEEEETTEECSCTTCCCBC
T ss_pred HHccccCCCCCcCCCEeeeEEEEEEECCEEEEECCccccCCCCCeec
Confidence 444444333221 3579999999999999999988765 7665
No 31
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=100.00 E-value=3.5e-37 Score=306.60 Aligned_cols=380 Identities=15% Similarity=0.177 Sum_probs=225.8
Q ss_pred eeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccC
Q 011766 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (478)
Q Consensus 20 ~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~ 99 (478)
+++|+|++|+++++ . .+++|+|+||||++|++..+. ..+.++||++|++|+|||||+|+|+....
T Consensus 1 ~~li~n~~vv~~~~---~-~~~~v~I~~g~I~~ig~~~~~-----~~~~~viD~~G~~v~PGlID~H~H~~~~~------ 65 (458)
T 1gkp_A 1 PLLIKNGEIITADS---R-YKADIYAEGETITRIGQNLEA-----PPGTEVIDATGKYVFPGFIDPHVHIYLPF------ 65 (458)
T ss_dssp CEEEESCEEEETTE---E-EECEEEESSSBCCEEESCCCC-----CTTCEEEECTTSEEEECEEEEEECSSCEE------
T ss_pred CEEEEeeEEECCCC---c-eEeeEEEECCEEEEecCCCCC-----CCCCeEEECCCCEEecCEEecccCCCcCC------
Confidence 36899999997542 2 568999999999999975321 12458999999999999999999995421
Q ss_pred CCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc----CHHHHHHHH-HHhCCeEEEecccccCC
Q 011766 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAV-ELLGLRACLVQSTMDCG 174 (478)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~----~~~~~~~~~-~~~g~~~~~~~~~~~~~ 174 (478)
......++.+ ...+.++++||||+++++.. ......+.. ....-+...........
T Consensus 66 ---------------~~~~~~~~~~----~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (458)
T 1gkp_A 66 ---------------MATFAKDTHE----TGSKAALMGGTTTYIEMCCPSRNDDALEGYQLWKSKAEGNSYCDYTFHMAV 126 (458)
T ss_dssp ---------------TTEECSCCHH----HHHHHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEEC
T ss_pred ---------------CCCcCHhHHH----HHHHHHHhCCccEEEeCCCCCCCCCHHHHHHHHHHHhccCceeeEEEEEee
Confidence 0001111211 12345689999999996432 222222221 11111110000000000
Q ss_pred CCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEe
Q 011766 175 EGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMH 254 (478)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H 254 (478)
+ ...+ +..+.++++...+...++....++..+.++++.+.++++.+++.++++++|
T Consensus 127 ---~-----~~~~----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H 182 (458)
T 1gkp_A 127 ---S-----KFDE----------------KTEGQLREIVADGISSFKIFLSYKNFFGVDDGEMYQTLRLAKELGVIVTAH 182 (458)
T ss_dssp ---C-----CCCT----------------THHHHHHHHHHTTCCEEEEEECSTTTTBCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred ---c-----CCch----------------hhHHHHHHHHHhCCCEEEEEeccCCCcCCCHHHHHHHHHHHHhcCCEEEEE
Confidence 0 0000 112222222222444566666666667788999999999999999999999
Q ss_pred ccCChhhhHHHhh-h--cCCC-------CchH--------HHHhhhCCCCCCeeeeeeccC-ChhHHHHHHhcCCeE--E
Q 011766 255 VAEIPYENQVVMD-T--RKVD-------HGTV--------TFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVKV--S 313 (478)
Q Consensus 255 ~~~~~~~~~~~~~-~--~~~~-------~~~~--------~~l~~~~~~~~~~~i~h~~~~-~~~~~~~~~~~~~~~--~ 313 (478)
+. .......... . .+.. ..+. ..+...+..+.+..+.|...- ..+.++.+++.|+.+ .
T Consensus 183 ~e-~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~H~~~~~~~~~i~~~~~~G~~v~~~ 261 (458)
T 1gkp_A 183 CE-NAELVGRLQQKLLSEGKTGPEWHEPSRPEAVEAEGTARFATFLETTGATGYVVHLSCKPALDAAMAAKARGVPIYIE 261 (458)
T ss_dssp ES-CHHHHHHHHHHHHHTTCCSGGGTTTTSCHHHHHHHHHHHHHHHHHHTCEEEECSCCSHHHHHHHHHHHHTTCCEEEE
T ss_pred cC-CHHHHHHHHHHHHhcCCCChhhccCcCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHcCCeEEEE
Confidence 94 3333222111 0 1110 0011 122222334455555554321 124577888888765 5
Q ss_pred ECcc------chhhc--------cCCCc---------HHHHHHCCCcEEEcCCCCCCCCC------cCHHH--------H
Q 011766 314 HCPA------SAMRM--------LGFAP---------IKEMLHADICVSLGTDGAPSNNR------MSIVD--------E 356 (478)
Q Consensus 314 ~~p~------~~~~~--------~~~~~---------~~~~~~~gv~v~~gsD~~~~~~~------~~~~~--------~ 356 (478)
+||. .++.. ...+| +.++++.|+.+++|||+.+.... .+++. +
T Consensus 262 ~~p~~~~~~~~~~~~~~~~g~~~~~~~p~r~~~~~~~l~~~~~~G~~~~~gtD~~~~~~~~k~~~~~~~~~~~~g~~g~~ 341 (458)
T 1gkp_A 262 SVIPHFLLDKTYAERGGVEAMKYIMSPPLRDKRNQKVLWDALAQGFIDTVGTDHCPFDTEQKLLGKEAFTAIPNGIPAIE 341 (458)
T ss_dssp EEHHHHHCCGGGGGSCHHHHHTTCCSSCCCCTHHHHHHHHHHHTTSSCEEECCBCCCCHHHHGGGSSCGGGSCCCBCCTT
T ss_pred ecccceeeCHHHhcccccCCcceEEeCCCCCHHHHHHHHHHHhcCCeeEEECCCCCCCHHHhhcccCChhhCCCCcccHH
Confidence 7776 33321 01233 33688999999999998765311 01111 2
Q ss_pred HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCC-------
Q 011766 357 MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHD------- 429 (478)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d------- 429 (478)
+.+..+..... ....+|++++++++|.|||++||+++++|+|++|++|||||+|.+.....+..+
T Consensus 342 ~~l~~~~~~~~--------~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~ 413 (458)
T 1gkp_A 342 DRVNLLYTYGV--------SRGRLDIHRFVDAASTKAAKLFGLFPRKGTIAVGSDADLVVYDPQYRGTISVKTQHVNNDY 413 (458)
T ss_dssp THHHHHHHHHT--------TSSSCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEETTCCEECCGGGCCSSSSC
T ss_pred HHHHHHHHHHH--------HcCCCCHHHHHHHHhhCHHHHhCCCCCCCcCCCCCcCCEEEEeCCCCeEEchHHcccccCC
Confidence 33322221110 122499999999999999999999877999999999999999998654333222
Q ss_pred -hhhhhhhccCCCCeeEEEEccEEEEECCeeecccH-HHHHH
Q 011766 430 -RITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMR-GRLFQ 469 (478)
Q Consensus 430 -~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~-~~~~~ 469 (478)
|+..+. ...+|..||++|++||++|++++... |++++
T Consensus 414 ~p~~g~~---~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~~ 452 (458)
T 1gkp_A 414 NGFEGFE---IDGRPSVVTVRGKVAVRDGQFVGEKGWGKLLR 452 (458)
T ss_dssp CTTTTCE---ESCEEEEEEETTEEEEETTEECCCTTCCCBCC
T ss_pred CccCCCE---EeeEEEEEEECCEEEEECCeeccCCCCceecc
Confidence 222211 13579999999999999999988765 87763
No 32
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=100.00 E-value=5.9e-36 Score=301.70 Aligned_cols=389 Identities=15% Similarity=0.167 Sum_probs=228.7
Q ss_pred cceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccc
Q 011766 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~ 97 (478)
+++++|+|++|+++++ . .+++|+|+||+|++|++..+. ..+.++||++|++|+|||||+|+|+.+....+
T Consensus 2 ~m~~li~n~~vv~~~~---~-~~~~v~I~~g~I~~Ig~~~~~-----~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~- 71 (559)
T 2fty_A 2 IYDLIIKNGIICTASD---I-YAAEIAVNNGKVQLIAASIDP-----SLGSEVIDAEGAFITPGGIDAHVHVDEPLKLL- 71 (559)
T ss_dssp CEEEEEESCEEECSSC---E-EECEEEEETTEEEEEESCCCG-----GGEEEEEECTTCEEEECEEECCBCCCCTTCTT-
T ss_pred CceEEEECcEEEcCCC---c-eeeeEEEECCEEEEecCCCCC-----CCCCeEEeCCCCEEEcCEEeeccCcCcccccc-
Confidence 5689999999997542 2 578999999999999975321 02457999999999999999999995432100
Q ss_pred cCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC-----HHHHHHHH----HHhCCe-EEEe
Q 011766 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAV----ELLGLR-ACLV 167 (478)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~-----~~~~~~~~----~~~g~~-~~~~ 167 (478)
. ...++. ....+.++++||||+++++... .....+.+ ...+.+ ..+.
T Consensus 72 ------------------~-~~~e~~----~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 128 (559)
T 2fty_A 72 ------------------G-DVVDTM----EHATRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQTLYCD 128 (559)
T ss_dssp ------------------S-CCSCCH----HHHHHHHHHTTEEEEEEEEECCTTCCSTTHHHHHHHHHHHHHTTSCCSSE
T ss_pred ------------------C-CCHHHH----HHHHHHHHhCcEEEEEECcCcccCCcchHHHHHHHHHHHHHHHhhcceeE
Confidence 0 011121 1234557899999999976432 11133333 444432 1100
Q ss_pred cccccCCCCCCCcccccCCcc---cCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHH
Q 011766 168 QSTMDCGEGLPASWAVRTTDD---CIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMA 244 (478)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a 244 (478)
...... . ..+.. ...+ .. ..+..++++++ +...++++..++. +.++.+.+.++++.|
T Consensus 129 ~~~~~~---~-~~~~~-~~~~~g~~l-----------~~~~~~l~~~~---G~~~iki~~~~~~-~~~s~e~l~~~~~~A 188 (559)
T 2fty_A 129 YGLHLI---L-FQIEK-PSVEARELL-----------DVQLQAAYNDY---GVSSVKMFMTYPG-LQISDYDIMSAMYAT 188 (559)
T ss_dssp EEEEEE---C-CCCCS-SHHHHHHHH-----------HHHHHHHHHHH---CCCEEEEESSSTT-TBCCHHHHHHHHHHH
T ss_pred EEeeee---e-ccCcC-CCchhhhhH-----------HHHHHHHHHHC---CCCEEEEEecCCC-CcCCHHHHHHHHHHH
Confidence 000000 0 00000 0000 01 01333334332 3456776666655 578899999999999
Q ss_pred HHcCCceeEeccCChhhhHHH--hhhcCCCC-------ch-------H-HHHhhhCCCCCCeeeeeeccCChhHHH---H
Q 011766 245 REFKTGIHMHVAEIPYENQVV--MDTRKVDH-------GT-------V-TFLDKIEFLQNNLLSAHTVWVNHTEIG---L 304 (478)
Q Consensus 245 ~~~~~~v~~H~~~~~~~~~~~--~~~~~~~~-------~~-------~-~~l~~~~~~~~~~~i~h~~~~~~~~~~---~ 304 (478)
+++|+++++|+.+........ ....+... .+ + ..+......+.+..+.|.. +.+.++ +
T Consensus 189 ~~~g~~v~~H~e~~~~i~~~~~~~~~~G~~~~~~~~~~~p~~~E~~av~~~i~la~~~g~~vhi~H~s--~~~~~~~i~~ 266 (559)
T 2fty_A 189 RKNGFTTMLHAENGDMVKWMIEALEEQGLTDAYYHGVSRPSIVEGEATNRAITLATTMDTPILFVHVS--SPQAAEVIKQ 266 (559)
T ss_dssp HHHTCEEEEECCCHHHHHHHHHHHHHTTCCSTTHHHHTSCHHHHHHHHHHHHHHHHHTTCCEEECSCC--CHHHHHHHHH
T ss_pred HhCCCEEEEECCChHHHHHHHHHHHhcCCCChhhcccCCCHHHHHHHHHHHHHHHHHhCCCEEEEcCC--CHHHHHHHHH
Confidence 999999999996543211110 01111100 00 0 1111112233444444443 233344 4
Q ss_pred HHhcCCeE--EECccchhh-----------------------------------------ccCC---------CcHHHHH
Q 011766 305 LSRAGVKV--SHCPASAMR-----------------------------------------MLGF---------APIKEML 332 (478)
Q Consensus 305 ~~~~~~~~--~~~p~~~~~-----------------------------------------~~~~---------~~~~~~~ 332 (478)
+++.|+.+ .+||..... ..-. .++.+++
T Consensus 267 ak~~G~~Vt~e~~p~~l~l~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~PplR~~~~~~~l~~~l 346 (559)
T 2fty_A 267 AQTKGLKVYAETCPQYALLSDAITRCHHHGEVESYGVGIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSIWKGM 346 (559)
T ss_dssp HHHTTCCEEEEECHHHHHCCGGGGSCC--------CCSCCGGGCSSSTTTCTTCTTGGGGGCCSSCCCCTTSHHHHHHHH
T ss_pred HHHcCCceEEeecCcccccCHHHhhccccccccccccccCccccccccccccCccccccCcEECCCCCCHHHHHHHHHHH
Confidence 44567554 788872110 0001 1366789
Q ss_pred HCCCcEEEcCCCCCCCCC-------------------cCHHH--------HHHHHHHHhcccccccCCCCCCCCC-CHHH
Q 011766 333 HADICVSLGTDGAPSNNR-------------------MSIVD--------EMYLASLINKGREVFANGTTDPAAL-PAET 384 (478)
Q Consensus 333 ~~gv~v~~gsD~~~~~~~-------------------~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l-s~~~ 384 (478)
++|+.++++||+.++... .+++. +++...+.... .....+ |+++
T Consensus 347 ~~G~~~~igTD~~p~~~~~k~~~~~k~~~~~~~~~~~~~f~~~~~G~~g~e~~l~~ll~~~--------v~~~~l~~~~~ 418 (559)
T 2fty_A 347 NNGTFTIVGSDHCSYNYYEKTSTASKHRAFDPENNKNGEFRYIPNGLPGVCTRMPLLYDYG--------YLRGNLTSMMK 418 (559)
T ss_dssp HTTSCSEECCCBCCCBSSCCSSTTBGGGGEEGGGTEESCGGGSCCCBCCTTTHHHHHHHHT--------TTTTSSSCHHH
T ss_pred hcCceEEEEeCCCCCChhhccccccccccccccccccCCHhhCCCCCccHHHHHHHHHHHH--------HHcCCCCCHHH
Confidence 999999999999776432 12322 33333322211 112358 9999
Q ss_pred HHHHHhHHHHHHcCCCCCccccccC-ccccEEEEcCCC--------CCCCCcCChhhhhhhcc-----CCCCeeEEEEcc
Q 011766 385 VLRMATINGAKSVLWDNDIGSLEAG-KKADMVVVDPFS--------WPMVPVHDRITSLVYCM-----RTENVVSVMCNG 450 (478)
Q Consensus 385 al~~~T~~pA~~lgl~~~~G~l~~G-~~ADlvv~d~~~--------~~~~~~~d~~~~~~~~~-----~~~~v~~v~v~G 450 (478)
+++++|.|||+++|+++++|+|++| ++|||||||.+. ....+.++..+...+.. -..+|..||++|
T Consensus 419 ~~~~~t~~~A~~lgl~~~~G~i~~G~~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~s~~~~sp~~g~~~~g~v~~t~v~G 498 (559)
T 2fty_A 419 LVEIQCTNPAKVYGMYPQKGSILPGVSDADLVIWYPDDSKKEYNSKPKLITNKLMEHNCDYTPFEGIEIKNWPRYTIVKG 498 (559)
T ss_dssp HHHHHTHHHHHHTTCTTTSSSCCTTTSBCCEEEECCSSCCCCCTTSCSBCCTGGGTSSCSCCTTTTCBCSCCEEEEEETT
T ss_pred HHHHHhHHHHHHhCCCCCCceeeccCCcCCEEEEeCcccccccCCccEEEchHHhcccCCCCCccCCEecceEEEEEECC
Confidence 9999999999999998778999999 999999999985 33333333333211111 135799999999
Q ss_pred EEEEECCeeeccc-HHHHHH
Q 011766 451 QWVMKNKKILLLM-RGRLFQ 469 (478)
Q Consensus 451 ~~v~~~g~~~~~~-~~~~~~ 469 (478)
++||++|++++.. .|++++
T Consensus 499 ~~v~~~g~~~~~~~~G~~~~ 518 (559)
T 2fty_A 499 KIVYKEGEILKENADGKYLK 518 (559)
T ss_dssp EEEEETTEECGGGCCCCBCC
T ss_pred EEEEECCeeccCCcCCeeec
Confidence 9999999998764 366654
No 33
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*
Probab=100.00 E-value=3.7e-35 Score=292.68 Aligned_cols=362 Identities=15% Similarity=0.110 Sum_probs=226.5
Q ss_pred eeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccc--
Q 011766 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI-- 97 (478)
Q Consensus 20 ~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~-- 97 (478)
.++|+|++|+|+++.. ...++|+|+||||++||+..++.......++++||++|++|+|||||+|+|+........
T Consensus 37 ~~li~ng~I~t~~~~~--~~~~~v~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~G~~v~PGfiD~H~H~~~~g~~~~~~ 114 (534)
T 3icj_A 37 MKALINGTIYTSFSPV--KKVSGLVISNERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPAFFDSHLHLDELGMSLEMV 114 (534)
T ss_dssp EEEEESSEEEEEETTE--EEESEEEEETTEEEEEECHHHHHHHHHHHTCEEEECTTCEEEECEEEEEECHHHHHHHHHSE
T ss_pred CEEEECCEEECCCCCC--ceeeEEEEECCEEEEEcChHHHHhhccCCCCEEEECCCCEEecCEeehhhhhhhhhhhcCcc
Confidence 4789999999987642 235699999999999998665422110135689999999999999999999865332110
Q ss_pred --cCCCCchH-----------Hhhhcccccc-------------------------------------------------
Q 011766 98 --ADDVDLMT-----------WLHDRIWPYE------------------------------------------------- 115 (478)
Q Consensus 98 --~~~~~~~~-----------~~~~~~~~~~------------------------------------------------- 115 (478)
....+..+ |+.+..|...
T Consensus 115 dl~~~~s~~e~~~~l~~~~~~wi~g~G~~~~~~~~~pt~~~LD~~~~Pv~l~~~~~H~~~~Ns~AL~~~gi~~t~~p~G~ 194 (534)
T 3icj_A 115 DLRGVKSMEELVERVKKGRGRIIFGFGWDQDELGRWPTREDLDVIDRPVFLYRRCFHVAVMNSKMIDLLNLKPSKDFDES 194 (534)
T ss_dssp ECTTCCSHHHHHHHHHTCCSSSEEEEEECHHHHSSCCCHHHHTTSSSCEEEEETTSSEEEECHHHHHHHCCCCCTTEETT
T ss_pred CCCCCCCHHHHHHHHHHHHhhCEEEcccCHHHhcCCCCHHHHhhCCCeEEEEecCCcHhHHhHHHHHHcCCCCCCCCCCC
Confidence 00001000 2211111100
Q ss_pred ----------------CC-C-ChHHHHHHHHHHHHHHHhcCcceeecCCcc-CHHHHHHHHHHh---CCeEEEecccccC
Q 011766 116 ----------------SN-M-TEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSEMAKAVELL---GLRACLVQSTMDC 173 (478)
Q Consensus 116 ----------------~~-~-~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~-~~~~~~~~~~~~---g~~~~~~~~~~~~ 173 (478)
+. . +.++.........+.+.+.|||++.+++.. ........+... .++....... .
T Consensus 195 tG~l~e~A~~~v~~~~p~~~l~~~~~~~~l~~a~~~~~~~GiTsv~d~~~~~~~~~~~~~l~~~g~l~~rv~~~~~~-~- 272 (534)
T 3icj_A 195 TGIVRERALEESRKIINEKILTVKDYKHYIESAQEHLLSLGVHSVGFMSVGEKALKALFELEREGRLKMNVFAYLSP-E- 272 (534)
T ss_dssp TTEEEHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTEEEEEEEEECHHHHHHHHHHHHTTCCCSEEEEEECG-G-
T ss_pred CceeeHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHHHHhCCCCcEEEEEecCH-H-
Confidence 00 1 223333344456778899999999997532 111223333332 3443221100 0
Q ss_pred CCCCCCcccccCCcccCCCCCCcccccc---ch-----hHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHH
Q 011766 174 GEGLPASWAVRTTDDCIQPDSSISFNFV---SS-----SQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAR 245 (478)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~ 245 (478)
... .+.......... ..+.+..+ .. ....+.+.|... .+..+....+++.+.++++.|+
T Consensus 273 --~~~-~~~~~~~~~~~~--~~~~~~gvK~~~DG~~~~~tA~l~~pY~d~--------~~~~g~~~~~~e~l~~~v~~A~ 339 (534)
T 3icj_A 273 --LLD-KLEELNLGKFEG--RRLRIWGVKLFVDGSLGARTALLSEPYTDN--------PTTSGELVMNKDEIVEVIERAK 339 (534)
T ss_dssp --GHH-HHHHHTCCSEEC--SSEEEEEEEEESCCCTTTTCSCCSSCBTTB--------TTCCCCCSSCHHHHHHHHHHHT
T ss_pred --HHH-HHHHhccccCCC--CcEEEEeEEEEEeCCCCccchhhcCCccCC--------CCCCCcccCCHHHHHHHHHHHH
Confidence 000 000000000000 00000000 00 000000000000 0113344578999999999999
Q ss_pred HcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchh-----
Q 011766 246 EFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAM----- 320 (478)
Q Consensus 246 ~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~----- 320 (478)
+.|+++++|+.+...... .+..+...+ .+..+.|+.++++++++++++.|+.+++||..+.
T Consensus 340 ~~G~~v~~Ha~gd~ai~~-----------~l~a~~~~~---~r~~ieH~~~~~~e~i~~la~~gv~~~~~P~~~~~~~~~ 405 (534)
T 3icj_A 340 PLGLDVAVHAIGDKAVDV-----------ALDAFEEAE---FSGRIEHASLVRDDQLERIKELKVRISAQPHFIVSDWWI 405 (534)
T ss_dssp TTTCEEEEEECSHHHHHH-----------HHHHHHHHT---CCCEEEECCBCCHHHHHHHHHHTCEEEECTTHHHHCTTH
T ss_pred HCCCEEEEEEcChHHHHH-----------HHHHHHhcc---CCCEEEECCCCCHHHHHHHHHcCCeEEEccccccchhHH
Confidence 999999999987654332 222333333 6788999999999999999999999999998753
Q ss_pred -------hccCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHH
Q 011766 321 -------RMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATING 393 (478)
Q Consensus 321 -------~~~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~p 393 (478)
+..+..|++.+++. +++++|||++.. +.+++..|+.+... ..+..++++|++|||+++|.++
T Consensus 406 ~~~lg~~r~~~~~p~~~l~~~-v~valGSD~p~~--~~~p~~~~~~av~r--------~~~~~~~~ls~~eaL~~~T~~~ 474 (534)
T 3icj_A 406 VNRVGEERAKWAYRLKTLSSI-TKLGFSTDSPIE--PADPWVSIDAAVNR--------YVVDPGERVSREEALHLYTHGS 474 (534)
T ss_dssp HHHHHHHHGGGBTCHHHHHHH-SCEEECCTTTTS--CCCHHHHHHHHHHC--------CSSCGGGCCCHHHHHHHTTHHH
T ss_pred HHhhCHHHHhccHHHHHHHHh-CCEEeecCCCCC--CCCHHHHHHHHHhc--------cccCcccCCCHHHHHHHHHHHH
Confidence 22467899999999 999999999654 46889888877643 1234556799999999999999
Q ss_pred HHHcCCCCCccccccCccccEEEEcCCCCCC
Q 011766 394 AKSVLWDNDIGSLEAGKKADMVVVDPFSWPM 424 (478)
Q Consensus 394 A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~ 424 (478)
|+++|++ ++|+|++||.|||||+|.|++..
T Consensus 475 A~~lg~e-~~GsLe~Gk~ADlvvld~dpl~~ 504 (534)
T 3icj_A 475 AQVTLAE-DLGKLERGFRAEYIILDRDPLKE 504 (534)
T ss_dssp HHHTTCT-TCSCCSTTSBCCEEEESSCTTC-
T ss_pred HHHhCCC-CCeEECCCCCcCEEEECCChhhc
Confidence 9999998 89999999999999999996653
No 34
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=100.00 E-value=4.6e-36 Score=297.65 Aligned_cols=381 Identities=17% Similarity=0.214 Sum_probs=225.9
Q ss_pred ceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcccc
Q 011766 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (478)
Q Consensus 19 ~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~ 98 (478)
|+++|+|++|++++ . ..+++|+|+||+|++|++... ..+.++||++|++|+|||||+|+|+.....
T Consensus 1 M~~~i~n~~v~~~~---~-~~~~~v~i~~g~I~~i~~~~~------~~~~~viD~~g~~v~PG~ID~H~H~~~~~~---- 66 (461)
T 3sfw_A 1 MKKWIRNGTVVTAS---D-TYQADVLIDGEKVVAIGSDLQ------ATDAEVIDATGYYLLPGGIDPHTHLDMPFG---- 66 (461)
T ss_dssp CEEEEESCEEECSS---C-EEECEEEEETTEEEEEESCCC------CSSCEEEECTTCEEEECEEEEEECTTCEET----
T ss_pred CcEEEECeEEECCC---C-cEEEEEEEECCEEEEEeCCCC------CCCCeEEECCCCEEEeeeEEeEeccCcCCC----
Confidence 46899999999743 2 356799999999999997542 136689999999999999999999953210
Q ss_pred CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC----HHHHHHH-HHHhCCeEEEecccccC
Q 011766 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH----VSEMAKA-VELLGLRACLVQSTMDC 173 (478)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~----~~~~~~~-~~~~g~~~~~~~~~~~~ 173 (478)
.....+.. ....+.++++||||+++++... .....+. .....-+..........
T Consensus 67 -----------------~~~~~e~~----~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 125 (461)
T 3sfw_A 67 -----------------GTVTSDNF----FTGTKAAAFGGTTSIVDFCLTSKGESLHSAIATWHEKARGKAVIDYGFHLM 125 (461)
T ss_dssp -----------------TEECSCCH----HHHHHHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEE
T ss_pred -----------------CcccHhHH----HHHHHHHHhCCEEEEEccCCCCCcchHHHHHHHHHHHhhcCcEEEEEEEEE
Confidence 00011111 1233557899999999865321 2222221 11111111000000000
Q ss_pred CCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcC-CCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCcee
Q 011766 174 GEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHH-AADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIH 252 (478)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~ 252 (478)
.. . ... +..+.++++.. .+...++.+..+...+..+.+.+.++++.++++|.++.
T Consensus 126 ---~~-~----~~~----------------~~~~~~~~l~~~~G~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~ 181 (461)
T 3sfw_A 126 ---VS-D----AND----------------HVLEELESVVNNEGITSLKVFMAYKNVLMADDETLFKTLIRAKELGALVQ 181 (461)
T ss_dssp ---CS-C----CCH----------------HHHHHHHHHHHTSCCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEE
T ss_pred ---Ee-C----CCH----------------HHHHHHHHHHHhCCCCEEEEEEecCCCcccCHHHHHHHHHHHHhcCCEEE
Confidence 00 0 001 22333333333 45555666555555566789999999999999999999
Q ss_pred EeccCChhhhHHHhhhc--CCC--------Cc-------hHHHHhhhCCCCCCeeeeeeccCCh----hHHHHHHhcCCe
Q 011766 253 MHVAEIPYENQVVMDTR--KVD--------HG-------TVTFLDKIEFLQNNLLSAHTVWVNH----TEIGLLSRAGVK 311 (478)
Q Consensus 253 ~H~~~~~~~~~~~~~~~--~~~--------~~-------~~~~l~~~~~~~~~~~i~h~~~~~~----~~~~~~~~~~~~ 311 (478)
+|+.+............ +.. .. ....+......+.+ .|..|++. +.++.+++.|..
T Consensus 182 ~Hae~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~---~hi~H~s~~~~l~~i~~ak~~G~~ 258 (461)
T 3sfw_A 182 VHAENGDVLDYLTKQALAEGNTDPIYHAYTRPPEAEGEATGRAIALTALADAQ---LYVVHVSCADAVRRIAEAREKGWN 258 (461)
T ss_dssp EECSCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHTTCE---EEECSCCSHHHHHHHHHHHHTTCE
T ss_pred EEcCCHHHHHHHHHHHHhcCCCChhHhcccCCHHHHHHHHHHHHHHHHHhCCC---EEEEecCcHHHHHHHHHHHhcCCc
Confidence 99765332211110000 000 00 00112222222333 35555554 567777777776
Q ss_pred E--EECccchhh--------------ccCCCc---------HHHHHHCCCcEEEcCCCCCCCCCc------CHH------
Q 011766 312 V--SHCPASAMR--------------MLGFAP---------IKEMLHADICVSLGTDGAPSNNRM------SIV------ 354 (478)
Q Consensus 312 ~--~~~p~~~~~--------------~~~~~~---------~~~~~~~gv~v~~gsD~~~~~~~~------~~~------ 354 (478)
+ .+||..... ....+| +.+++..|+.++++||+.++.... +.+
T Consensus 259 vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~Pplr~~~~~~aL~~~l~~G~~~~i~sD~~p~~~~~~k~~~~~~~~~~~~G 338 (461)
T 3sfw_A 259 VYGETCPQYLVLDITALEKPDFEGAKYVWSPPLREKWNQDVLWSALKNGILQTVGSDHCPFNFSGQKELGRRDFTKIPNG 338 (461)
T ss_dssp EEEEECHHHHHCCGGGGGCTTTGGGGGCCSSCCCCTHHHHHHHHHHHTTSSCEECCCBCCCCTTTTGGGGTTCGGGSCCC
T ss_pred EEEeeccceEEEcHHHhcCccccCCcEEEcCCCCChHHHHHHHHHHhcCCceEEECCCCCCCchhhhhcccCCHhhCCCC
Confidence 5 688853211 011233 356788899999999998764111 011
Q ss_pred ---HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChh
Q 011766 355 ---DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRI 431 (478)
Q Consensus 355 ---~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~ 431 (478)
.+......... .....++|++++++++|.|||+++|+++++|+|++|++|||||+|.+..+..+.++..
T Consensus 339 ~~g~e~~~~~~~~~--------~~~~~~~~~~~~~~~~t~~~a~~~g~~~~~G~l~~G~~Ad~~~~d~~~~~~~~~~~~~ 410 (461)
T 3sfw_A 339 GPIIEDRMTILFSE--------GVRKGKISLNQFVDITSTKVAKLFGMFPQKGTIAVGSDADIVLFDPTVQRTISVETHH 410 (461)
T ss_dssp BCCTTTHHHHHHHH--------TTTTTSSCHHHHHHHHTHHHHHHHTCTTTSSSCSTTSBCCEEEEEEEEEEECCTTTCC
T ss_pred CccHHHHHHHHHHH--------HHHcCCCCHHHHHHHHhHHHHHHcCCCCCCCccCCCCcCCEEEEcCCCCEEEchHHcc
Confidence 11112222211 1123469999999999999999999987899999999999999998843323333333
Q ss_pred hhhhhccC-----CCCeeEEEEccEEEEECCeeeccc-HHHHHH
Q 011766 432 TSLVYCMR-----TENVVSVMCNGQWVMKNKKILLLM-RGRLFQ 469 (478)
Q Consensus 432 ~~~~~~~~-----~~~v~~v~v~G~~v~~~g~~~~~~-~~~~~~ 469 (478)
+...+... ..+|.+||++|++||++|++++.. .|++++
T Consensus 411 ~~~~~sp~~g~~~~~~v~~t~v~G~~v~~~g~~~~~~~~G~~~~ 454 (461)
T 3sfw_A 411 MNVDYNPFEGMQVHGDVISVLSRGAFVVRNKQFVGHAGAGRYVK 454 (461)
T ss_dssp SSSSCCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCCCBCC
T ss_pred cccCCCCCCCCEecceEEEEEECCEEEEECCeeccCCCCceEec
Confidence 32222111 148999999999999999998755 466553
No 35
>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens}
Probab=100.00 E-value=5.6e-36 Score=293.91 Aligned_cols=370 Identities=18% Similarity=0.171 Sum_probs=216.9
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEE-CCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVV-QDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~-~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~ 95 (478)
.+++++|+|++|+++++. ....+++|+|+ ||||++|++..+. ..+.++||++|++|+|||||+|+|+......
T Consensus 13 ~~~~~li~n~~vv~~~~~-~~~~~~~v~I~~~g~I~~Ig~~~~~-----~~~~~viD~~g~~v~PGlID~H~H~~~~~~~ 86 (417)
T 2ogj_A 13 LQAPILLTNVKPVGFGKG-ASQSSTDILIGGDGKIAAVGSALQA-----PADTQRIDAKGAFISPGWVDLHVHIWHGGTD 86 (417)
T ss_dssp -CCCEEEEEEEECSSCTT-CCCSCEEEEECTTSBEEEEETTCCC-----SSCEEECCC--CEEEECEEEEEECCCBTTBS
T ss_pred CCCcEEEECCEEEcCCCC-ccCccceEEEecCCEEEEeccCCCC-----CCCCeEEECCCCEEccCeeeccccccccccc
Confidence 346899999999975431 13467899999 9999999874321 1245799999999999999999999543211
Q ss_pred cccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc---CHHHHHHHHHH-hC--CeEEEecc
Q 011766 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAVEL-LG--LRACLVQS 169 (478)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~---~~~~~~~~~~~-~g--~~~~~~~~ 169 (478)
. ..+.. ..++++||||+++++.. ......+.... .. ++.++...
T Consensus 87 ~--------------------~~~~~----------~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 136 (417)
T 2ogj_A 87 I--------------------SIRPS----------ECGAERGVTTLVDAGSAGEANFHGFREYIIEPSRERIKAFLNLG 136 (417)
T ss_dssp S--------------------CCCGG----------GTSGGGTEEEEEEESSCCSTTHHHHHHHTTTTCSSEEEEEEESS
T ss_pred c--------------------CCCHH----------HHHHhCCcCeEEeCCcCCCcCHHHHHHHHhhccccCeEEEeccc
Confidence 0 00111 13689999999997532 22222221111 11 22322211
Q ss_pred cccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCC
Q 011766 170 TMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT 249 (478)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~ 249 (478)
. .+............ .. ........+.++++.. ....++..........++.+.+.++++++++.|+
T Consensus 137 ~----~G~~~~~~~~e~~~-~~-------~~~~~~~~~~~~~~~~-~~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~ 203 (417)
T 2ogj_A 137 S----IGLVACNRVPELRD-IK-------DIDLDRILECYAENSE-HIVGLKVRASHVITGSWGVTPVKLGKKIAKILKV 203 (417)
T ss_dssp T----TTTTTTTTSCSCSS-GG-------GCCHHHHHHHHHTCTT-TEEEEEEEESHHHHTTCTTHHHHHHHHHHHHHTC
T ss_pred c----CcCCCCCCcccccc-hh-------hcCHHHHHHHHHhCCC-ceEEEEEEecCCccccccHHHHHHHHHHHHHcCC
Confidence 1 11111000000000 00 0011233444443321 1122444444443455677888889999999999
Q ss_pred ceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCCh-----------hHHHHHHhcCCeEEECccc
Q 011766 250 GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-----------TEIGLLSRAGVKVSHCPAS 318 (478)
Q Consensus 250 ~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~-----------~~~~~~~~~~~~~~~~p~~ 318 (478)
++.+|+.+.....+.. +.. +.....+.|+....+ +++.++++.|+.+.++|..
T Consensus 204 ~v~~H~~~~~~~~~~~-------------~~~---l~~g~~~~H~~~~~~~~~~~~~~~~~~~i~~~~~~g~~v~~~~~~ 267 (417)
T 2ogj_A 204 PMMVHVGEPPALYDEV-------------LEI---LGPGDVVTHCFNGKSGSSIMEDEDLFNLAERCAGEGIRLDIGHGG 267 (417)
T ss_dssp CEEEEECSSSSCHHHH-------------HHH---CCTTCEEETTTCCCTTTCTTSCHHHHHHHHHC--CCCEEECCBCS
T ss_pred cEEEEcCCCcccHHHH-------------HHH---hcCCCEEEeccCCCccchhccCHHHHHHHHHHHhcCcEEEecCCC
Confidence 9999997643211111 111 112255677765332 5777778888888777653
Q ss_pred hhhccCCCcHHHHHHCC-CcEEEcCCCCCCC-C---CcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHH
Q 011766 319 AMRMLGFAPIKEMLHAD-ICVSLGTDGAPSN-N---RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATING 393 (478)
Q Consensus 319 ~~~~~~~~~~~~~~~~g-v~v~~gsD~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~p 393 (478)
.. ....+++.+++.| ++++++||++ .. . ...+...+.... . .++|++++++++|.||
T Consensus 268 ~~--~~~~~~~~~~~~G~~~~~lgtD~~-~~~~~g~~~~l~~~~~~~~--~-------------~~l~~~~al~~~T~n~ 329 (417)
T 2ogj_A 268 AS--FSFKVAEAAIARGLLPFSISTDLH-GHSMNFPVWDLATTMSKLL--S-------------VDMPFENVVEAVTRNP 329 (417)
T ss_dssp SS--CCHHHHHHHHHTTCCCSBCCBCBS-TTTTTTTCCCHHHHHHHHH--H-------------TTCCHHHHHHTTTHHH
T ss_pred cc--ccchHHHHHHHcCCCceEEEcCCC-CCccCCChhHHHHHHHHHH--H-------------cCCCHHHHHHHHHHHH
Confidence 21 2346788999999 9999999986 42 1 112222222111 1 2599999999999999
Q ss_pred HHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHHHHH
Q 011766 394 AKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQLQDK 473 (478)
Q Consensus 394 A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~~~~ 473 (478)
|+++|+++ +|+|++|++|||||+|.+... .+..++....++.....+|..||++|++||+++++++.+ +++++++.
T Consensus 330 A~~lgl~~-~G~l~~G~~ADlvv~d~~~~~-~~~~~~~g~~~~~~~~~~v~~t~v~G~~v~~~~~~~~~~--~~~~~~~~ 405 (417)
T 2ogj_A 330 ASVIRLDM-ENRLDVGQRADFTVFDLVDAD-LEATDSNGDVSRLKRLFEPRYAVIGAEAIAASRYIPRAR--KLVRHSHG 405 (417)
T ss_dssp HHHTTCCC-SSTTSTTSBCEEEEEEEEEEE-EEEECTTSCEEEEEEEEEEEEEEETTEEEECCCCCCCC-----------
T ss_pred HHHhCCCC-CCccCCCCcccEEEEecccCC-ceecCCCCceEecccccceEEEEECCEEEEeCCccchHH--HHHHHhhc
Confidence 99999976 899999999999999986321 122333333333333458999999999999999999877 66666543
No 36
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A*
Probab=100.00 E-value=5.4e-35 Score=283.49 Aligned_cols=348 Identities=16% Similarity=0.127 Sum_probs=213.1
Q ss_pred eEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCC
Q 011766 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (478)
Q Consensus 21 ~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~ 100 (478)
++|+|++|++++ ..+++++|+|+||+|++|++..+. + .+.++||++|++|+|||||+|+|+....
T Consensus 2 ~li~~~~v~~~~---~~~~~~~v~I~~g~I~~vg~~~~~----~-~~~~viD~~g~~v~PGlID~H~H~~~g~------- 66 (382)
T 1yrr_A 2 YALTQGRIFTGH---EFLDDHAVVIADGLIKSVCPVAEL----P-PEIEQRSLNGAILSPGFIDVQLNGCGGV------- 66 (382)
T ss_dssp EEEESSEEECSS---CEESSEEEEEETTEEEEEEEGGGS----C-TTCCEEECTTCEEEECEEEEEESEETTE-------
T ss_pred EEEEeeEEEcCC---ceeeCCEEEEECCEEEEEecCCCC----C-ccceeecCCCCEEccCEEEEeecccCCc-------
Confidence 579999999764 266789999999999999875321 1 2457999999999999999999985310
Q ss_pred CCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCH-H-------HHHHHHHHhCCeEEEeccccc
Q 011766 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV-S-------EMAKAVELLGLRACLVQSTMD 172 (478)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~-~-------~~~~~~~~~g~~~~~~~~~~~ 172 (478)
++.+| ...++++.. .....+++++||||+++++.... . ...+.....|.+.. + ...
T Consensus 67 -~~~~~--------~~~~~~~~~----~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-g--~~~ 130 (382)
T 1yrr_A 67 -QFNDT--------AEAVSVETL----EIMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQAL-G--LHL 130 (382)
T ss_dssp -ESSSS--------TTTSSHHHH----HHHHHHHHHTTEEEEEEEEECCCHHHHHHHHHHHHHHHHHCTTSBC-C--EEE
T ss_pred -Ccccc--------ccCCCHHHH----HHHHHHHHhCCeEEEEeecCCCCHHHHHHHHHHHHHHhhccCCcee-E--EEE
Confidence 11111 111233322 22567899999999999653321 1 11222222344421 1 111
Q ss_pred CCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEE-eccccccCCHHHHHHHHHHHHHcCCce
Q 011766 173 CGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWF-GIRQIMNATDRLLLETRDMAREFKTGI 251 (478)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~a~~~~~~v 251 (478)
.+....+............ ....+.++ +...+.+.++.+. .+. +.+.++++.+++.|+++
T Consensus 131 ~g~~~~~~~~g~~~~~~~~-----------~~~~~~~~-~~~~~~~~ik~~~~~~~-------~~~~~~~~~a~~~g~~v 191 (382)
T 1yrr_A 131 EGPWLNLVKKGTHNPNFVR-----------KPDAALVD-FLCENADVITKVTLAPE-------MVPAEVISKLANAGIVV 191 (382)
T ss_dssp ECSSCCCSCC-CCCSCSCC-----------HHHHHHHH-HHHHTTTTEEEEEECGG-------GSCHHHHHHHHHTTCEE
T ss_pred eCCcCCccccCCCCHHHcc-----------CCCHHHHH-HHHhcCCCEEEEEECCC-------CChHHHHHHHHHCCCEE
Confidence 1111111111100111111 12233344 3333445666532 111 34557889999999999
Q ss_pred eE-eccCChhhhHHHhhh--cCCCCc----------hHHHHhhhCCCCCC---eeeeeeccCChhHHHHHHhcC-CeEEE
Q 011766 252 HM-HVAEIPYENQVVMDT--RKVDHG----------TVTFLDKIEFLQNN---LLSAHTVWVNHTEIGLLSRAG-VKVSH 314 (478)
Q Consensus 252 ~~-H~~~~~~~~~~~~~~--~~~~~~----------~~~~l~~~~~~~~~---~~i~h~~~~~~~~~~~~~~~~-~~~~~ 314 (478)
++ |+.+...+....... ....|. ....+... ....+ .++.|+.+++++.++++++.+ ..+..
T Consensus 192 ~~gH~~~~~~~~~~~~~~G~~~~~h~~~~~~~~~~~~~g~~~~~-l~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~ 270 (382)
T 1yrr_A 192 SAGHSNATLKEAKAGFRAGITFATHLYNAMPYITGREPGLAGAI-LDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCL 270 (382)
T ss_dssp EECSCCCCHHHHHHHHHHTCCEESSTTTTSCCBCSSCCHHHHHH-HHCTTCEEEEECSSSSSCHHHHHHHHHHHGGGEEE
T ss_pred EEECCCCCHHHHHHHHHcCCCeeEECCCCCCccccCCcchhhHh-hcCCcceeeecCcccccCHHHHHHHHHcCCCcEEE
Confidence 98 998655443332221 101100 00000000 00011 268899999999999998877 45555
Q ss_pred Cccchhhcc---CC---CcHHHHHHCCCcE-EEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHH
Q 011766 315 CPASAMRML---GF---APIKEMLHADICV-SLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLR 387 (478)
Q Consensus 315 ~p~~~~~~~---~~---~~~~~~~~~gv~v-~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~ 387 (478)
++....... +. ..++.+++.|+++ +.|||.. +..+++.+|+.+... .++|++++|+
T Consensus 271 ~~d~~~~~g~~~~~~~~~~~~~~~~~Gv~~~~~Gt~~g---~~~~~~~~~~~~~~~--------------~g~~~~~al~ 333 (382)
T 1yrr_A 271 VTDATAPAGANIEQFIFAGKTIYYRNGLCVDENGTLSG---SSLTMIEGVRNLVEH--------------CGIALDEVLR 333 (382)
T ss_dssp ECCBCTTTTSCCSEEEETTEEEEECSSCEECTTCCEEE---BCCCHHHHHHHHHHH--------------HCCCHHHHHH
T ss_pred ECcChHhcCCCCceEEECCEEEEEECCEEEeCCCcCcC---CccCHHHHHHHHHHH--------------hCCCHHHHHH
Confidence 554322211 00 1145678889887 4466643 346788888876632 1599999999
Q ss_pred HHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEEC
Q 011766 388 MATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKN 456 (478)
Q Consensus 388 ~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~ 456 (478)
++|.|||+++|+++++|+|++||.|||||+|.+ .+|..||++|++|+++
T Consensus 334 ~aT~~~A~~lg~~~~~G~i~~G~~ADlvvld~~--------------------~~v~~v~~~G~~v~~~ 382 (382)
T 1yrr_A 334 MATLYPARAIGVEKRLGTLAAGKVANLTAFTPD--------------------FKITKTIVNGNEVVTQ 382 (382)
T ss_dssp HHTHHHHHHTTCTTTSSSCCTTSBCCEEEECTT--------------------SCEEEEEETTEEEEEC
T ss_pred HHHHHHHHHhCCCCCCCccCCCCCCCEEEECCC--------------------CCEEEEEECCEEEEeC
Confidence 999999999999888999999999999999997 4899999999999975
No 37
>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis}
Probab=100.00 E-value=2.5e-36 Score=298.93 Aligned_cols=383 Identities=16% Similarity=0.151 Sum_probs=221.5
Q ss_pred cceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcC-ChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcc
Q 011766 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQ-SADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~-~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~ 96 (478)
+|+++|+|++|++++ . ..+++|+|+||+|++|++ ..... ....++++||++|++|+|||||+|+|+....
T Consensus 3 ~m~~li~~~~v~~~~---~-~~~~~v~i~~g~I~~i~~~~~~~~--~~~~~~~viD~~g~~v~PGlID~H~H~~~~~--- 73 (452)
T 2gwn_A 3 AMKILLRNALITNEG---K-TFPGSVMIDGAFISRIIEGELPAD--DNLSADEVIECSGLRLFPGCIDDQVHFREPG--- 73 (452)
T ss_dssp CSEEEEEEEEEEETT---E-EEEEEEEEETTEEEEEEESCCCTT--CCTTCSEEEECTTCEEEECEEEEEECCCTTT---
T ss_pred cccEEEECeEEECCC---c-eeeeeEEEECCEEEEEecCCCccc--cCCCCCeEEeCCCCEEecCEEeeccccCCCC---
Confidence 468899999999743 2 467899999999999986 42210 0012458999999999999999999995310
Q ss_pred ccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC-----HHH---HHHHHHHhCCeEEEec
Q 011766 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSE---MAKAVELLGLRACLVQ 168 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~-----~~~---~~~~~~~~g~~~~~~~ 168 (478)
..+.++. ....+.++++||||+++++... ... ..+.....+.-.+...
T Consensus 74 --------------------~~~~e~~----~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (452)
T 2gwn_A 74 --------------------LTHKATI----ASESRAAVAGGVTSFMDMPNTNPPTTMWERLLEKRQIGADTAWANYGFF 129 (452)
T ss_dssp --------------------CTTTCCH----HHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEEC
T ss_pred --------------------CCcHHHH----HHHHHHHHhCCeEEEEcCCCCCCCCChHHHHHHHHHHhhccCcccEEEE
Confidence 0011111 1223456799999999976331 111 1122222221111100
Q ss_pred ccccCCCCCCCcccccC--CcccCC--CCCC-cccc-ccchhHHHHHHHhcCCCCCCeEEEEe-----------------
Q 011766 169 STMDCGEGLPASWAVRT--TDDCIQ--PDSS-ISFN-FVSSSQKELYAKHHHAADGRIRIWFG----------------- 225 (478)
Q Consensus 169 ~~~~~~~~~~~~~~~~~--~~~~~~--~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 225 (478)
.....+ ......... ....+. .... ..+. .......+.++.. ...+.....
T Consensus 130 ~~~~~~--~~~~i~~~~~~g~~g~k~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~h~~~~~~~~~~~~~~~~~~G 203 (452)
T 2gwn_A 130 FGGTND--NIDEIKRVDKHLVPGLKLFLGSSTGNMLVDNKETLEKIFGEC----DLLIATHCEKEEIIRANKEHYKAKYG 203 (452)
T ss_dssp EECCSS--CHHHHHTCCTTSCSCEEEESSSCCGGGBCCCHHHHHHHHHHC----CSCEEEECCCHHHHHHHHHHHHHHHC
T ss_pred EeecCC--CHHHHHHHHHcCCCEEEEEeccCCCCcccCCHHHHHHHHHHc----CCEEEEcCCCHHHHHhHHhhhhhhcC
Confidence 000000 000000000 000000 0000 0000 0011233333332 111211000
Q ss_pred ----c--c---ccccCCHHHHHHHHHHHHHcCCceeE-eccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCe---eee
Q 011766 226 ----I--R---QIMNATDRLLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNL---LSA 292 (478)
Q Consensus 226 ----~--~---~~~~~~~~~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~i~ 292 (478)
+ + .......+.+++++++|++.|+++++ |+.. ....+.+.... ..+.. .. +..
T Consensus 204 ~~~~~~~h~~~~~~~~~~~~l~~~~~la~~~g~~v~i~H~~~-~~~~~~~~~~~-----------a~~~~--~v~~~~~~ 269 (452)
T 2gwn_A 204 NDLDIHFHPLIRSEEACYRSSAEAVELAERMNARLHILHLST-EKELSLFRNDI-----------PTAQK--RITSEVCV 269 (452)
T ss_dssp SCCCGGGHHHHSCHHHHHHHHHHHHHHHHHHTCCEEECCCCC-TGGGGGSCCSS-----------CGGGC--SEEEEEEH
T ss_pred cccchhhccccCChHHHHHHHHHHHHHHHHhCCCEEEEeCCC-HHHHHHHHHhh-----------cccCC--CeEEEEch
Confidence 0 0 01112356788899999999999999 8873 22222211100 00000 12 234
Q ss_pred eeccCChhHHHHHHhcCCeEEECccchhhc-cCCCcHHHHHHCCCcEEEcCCCCCCCCC---cCHHH--------HHHHH
Q 011766 293 HTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNR---MSIVD--------EMYLA 360 (478)
Q Consensus 293 h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~v~~gsD~~~~~~~---~~~~~--------~~~~~ 360 (478)
|+.++++++++. .+..+.++|. ++. .+..++.+++++|+++++|||+.+.... .+++. +++..
T Consensus 270 h~~~l~~~~~~~---~g~~~~~~P~--lr~~~~~~~l~~~l~~Gv~~~lgTD~~~~~~~~k~~~~~~~~~g~~~~e~~~~ 344 (452)
T 2gwn_A 270 HHLWFSDTDYGR---LGNRIKWNPA--IKKESDREALRAAVRNGRIDIIATDHAPHLLREKEGSCLQAASGGPLVQHSLL 344 (452)
T ss_dssp HHHHCCGGGHHH---HGGGGCCSSC--CCCHHHHHHHHHHHHHSSSCEEECCBCCCCHHHHCSCTTTSCCCCCCTTTHHH
T ss_pred HHhhcCHHHHhc---cCceEEECCC--CCCHHHHHHHHHHHHCCCceEEEeCCCCCChHHhcCChhhCCCCCccHHHHHH
Confidence 888999988876 5667777887 333 3567889999999999999999765321 23332 22222
Q ss_pred HHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccC-
Q 011766 361 SLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMR- 439 (478)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~- 439 (478)
...... ...++|++++++++|.|||+++|++ ++|+|++|++|||||+|.++....+..++.+...+...
T Consensus 345 ~~~~~~---------~~~~ls~~~~l~~~T~~~A~~lgl~-~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~ 414 (452)
T 2gwn_A 345 ALLELC---------NQGIFSIEEIVSKTAHIPATLFAIE-KRGYIRPGYYADLVLVDPSSPHTVSADNILSLCGWSPFE 414 (452)
T ss_dssp HHHHHH---------HTTSSCHHHHHHHHTHHHHHHHTBT-TCSSCCTTSBCCEEEEETTSCEECCTTTCCSTTCCCTTT
T ss_pred HHHHHH---------HcCCCCHHHHHHHHhHhHHHHcCCC-CCCcccCCCcCCEEEEcCCCCeEECHHHccccCCCCCCC
Confidence 221100 0236999999999999999999996 68999999999999999986554454555444433332
Q ss_pred ----CCCeeEEEEccEEEEECCeeecc-cHHHHH
Q 011766 440 ----TENVVSVMCNGQWVMKNKKILLL-MRGRLF 468 (478)
Q Consensus 440 ----~~~v~~v~v~G~~v~~~g~~~~~-~~~~~~ 468 (478)
..+|..||++|++|+++|+++.. ..|+++
T Consensus 415 g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~ 448 (452)
T 2gwn_A 415 GFTFSHSVAYTFVNGCLAYAKGRLAESRPTVHPL 448 (452)
T ss_dssp TCEESCEEEEEEETTEEEEETTEECSSCCCCCBC
T ss_pred CcEEeeeEEEEEECCEEEEECCeeccCCCCceee
Confidence 46799999999999999999865 456655
No 38
>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=1.5e-36 Score=301.78 Aligned_cols=380 Identities=14% Similarity=0.151 Sum_probs=211.1
Q ss_pred ceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcccc
Q 011766 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (478)
Q Consensus 19 ~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~ 98 (478)
++++|+|++|++++ . ..+++|+|+||+|++|++... .++++||++|++|+|||||+|+|+.+....
T Consensus 1 ~~~li~n~~v~~~~---~-~~~~~v~I~~g~I~~ig~~~~-------~~~~viD~~G~~v~PGlID~H~H~~~~~~~--- 66 (457)
T 1nfg_A 1 MDIIIKNGTIVTAD---G-ISRADLGIKDGKITQIGGALG-------PAERTIDAAGRYVFPGGIDVHTHVETVSFN--- 66 (457)
T ss_dssp CCEEEEEEEEEETT---E-EEEEEEEEETTEEEEESSCCC-------CCSEEEECTTCEEEECEEEEEECCSCEETT---
T ss_pred CcEEEEeeEEEeCC---C-ceeeeEEEECCEEEEecCCCC-------CCCeEEeCCCCEEccceEeeccccccCcCC---
Confidence 36899999999754 2 257899999999999987421 245899999999999999999999531100
Q ss_pred CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC----HHHHHHHHHHh-CCeEEEecccccC
Q 011766 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH----VSEMAKAVELL-GLRACLVQSTMDC 173 (478)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~----~~~~~~~~~~~-g~~~~~~~~~~~~ 173 (478)
.+..++.+ ...+.++++||||+++++... .....+..... .-...........
T Consensus 67 ------------------~~~~e~~~----~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (457)
T 1nfg_A 67 ------------------TQSADTFA----TATVAAACGGTTTIVDFCQQDRGHSLAEAVAKWDGMAGGKSAIDYGYHII 124 (457)
T ss_dssp ------------------EECSCCHH----HHHHHHHHTTEEEEEEEEECCTTSCHHHHHHHHHHHHTTTCSSEEEEEEE
T ss_pred ------------------CCChhhHH----HHHHHHHhCCcEEEEeCCCCCCCCChHHHHHHHHHHhcccCccCEEEEEe
Confidence 00111211 123457899999999975321 12212211111 0000000000000
Q ss_pred CCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeE
Q 011766 174 GEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHM 253 (478)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~ 253 (478)
. +. . . .+..+.++++...+...++.+.........+.+.+.++++.+++.+.++.+
T Consensus 125 ~---~~-~---------~-----------~~~~~~~~~~~~~G~~~~k~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~ 180 (457)
T 1nfg_A 125 V---LD-P---------T-----------DSVIEELEVLPDLGITSFKVFMAYRGMNMIDDVTLLKTLDKAVKTGSLVMV 180 (457)
T ss_dssp C---SS-C---------C-----------HHHHHHTTTGGGGTCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEE
T ss_pred e---cC-C---------c-----------hhHHHHHHHHHHcCCCEEEEeeccCCCCCCCHHHHHHHHHHHHhcCCEEEE
Confidence 0 00 0 0 011122223333333444443333221234667777888889999999999
Q ss_pred eccCChhhhHHHhh--hcCCCC-------ch--------HHHHhhhCCCCCCeeeeeeccCChhHHHH---HHhcCCeE-
Q 011766 254 HVAEIPYENQVVMD--TRKVDH-------GT--------VTFLDKIEFLQNNLLSAHTVWVNHTEIGL---LSRAGVKV- 312 (478)
Q Consensus 254 H~~~~~~~~~~~~~--~~~~~~-------~~--------~~~l~~~~~~~~~~~i~h~~~~~~~~~~~---~~~~~~~~- 312 (478)
|............. ..+... .+ .+.+......+.+..+.|.. +.+.++. +++.|..+
T Consensus 181 H~e~~~~~~~~~~~~~~~g~~~~~~h~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~H~~--~~~~~~~~~~~~~~G~~v~ 258 (457)
T 1nfg_A 181 HAENGDAADYLRDKFVAEGKTAPIYHALSRPPRVEAEATARALALAEIVNAPIYIVHVT--CEESLEEVMRAKSRGVRAL 258 (457)
T ss_dssp ECCCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEECCCC--SHHHHHHHHHHHHHTCCEE
T ss_pred eCCCHHHHHHHHHHHHhcCCcchhhccccCCHHHHHHHHHHHHHHHHHHCCCEEEEeCC--cHHHHHHHHHHHHcCCeEE
Confidence 98543221111110 011000 00 00111111112223333433 2333333 33445432
Q ss_pred -EECccch------hh----------------c-cCCCcHHHHHHCCCcEEEcCCCCCCCCC-------cCHHH------
Q 011766 313 -SHCPASA------MR----------------M-LGFAPIKEMLHADICVSLGTDGAPSNNR-------MSIVD------ 355 (478)
Q Consensus 313 -~~~p~~~------~~----------------~-~~~~~~~~~~~~gv~v~~gsD~~~~~~~-------~~~~~------ 355 (478)
.++|... .. . .+..++..+++.|+.+++|||+.+.... .+++.
T Consensus 259 ~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~G~~~~~gtD~~~~~~~~~k~~~~~~~~~~~~g~~ 338 (457)
T 1nfg_A 259 AETCTHYLYLTKEDLERPDFEGAKYVFTPPARAKKDHDVLWNALRNGVFETVSSDHCSWLFKGHKDRGRNDFRAIPNGAP 338 (457)
T ss_dssp ECEEGGGGTCCGGGGGCTTTGGGGGCCSSCCCCHHHHHHHHHHHHTTCCSCEECCBCCCCTTTTTTTTTTCGGGSCCCBC
T ss_pred EEEchHHhEeCHHHhccccccCceeEEcCCCCCHHHHHHHHHHHhCCCeEEEecCCCCCChHHhhhcccCCHhHCCCCcc
Confidence 2233210 00 0 1223467889999999999998665322 22321
Q ss_pred --HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhh
Q 011766 356 --EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITS 433 (478)
Q Consensus 356 --~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~ 433 (478)
+++........ ...++|++++++++|.|||++||+++++|+|++|++|||||+|.++.+..+..++.+.
T Consensus 339 g~e~~~~~~~~~~---------~~~~l~~~~~l~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~ 409 (457)
T 1nfg_A 339 GVEERLMMVYQGV---------NEGRISLTQFVELVATRPAKVFGMFPQKGTIAVGSDADIVLWDPEAEMVIEQTAMHNA 409 (457)
T ss_dssp CTTTHHHHHHHHH---------HTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCSTTSBCCEEEEEEEEEEECCGGGSCSS
T ss_pred cHHHHHHHHHHHH---------HcCCCCHHHHHHHHhhhHHHHhCCCCCCcCcCCCCccCEEEEeCCCCEEecHHHccCC
Confidence 22222211100 0125999999999999999999998778999999999999999986443343343333
Q ss_pred hhhccC-----CCCeeEEEEccEEEEECCeeecccH-HHHHH
Q 011766 434 LVYCMR-----TENVVSVMCNGQWVMKNKKILLLMR-GRLFQ 469 (478)
Q Consensus 434 ~~~~~~-----~~~v~~v~v~G~~v~~~g~~~~~~~-~~~~~ 469 (478)
..+... ..+|..||++|++||++|++++... |++++
T Consensus 410 ~~~~~~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~~ 451 (457)
T 1nfg_A 410 MDYSSYEGHKVKGVPKTVLLRGKVIVDEGSYVGEPTDGKFLK 451 (457)
T ss_dssp CSCCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTSCCBCC
T ss_pred CCCCCccCCEecceEEEEEECCEEEEECCccccCCCCCeeeC
Confidence 322211 2479999999999999999987765 76653
No 39
>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A
Probab=100.00 E-value=9.9e-36 Score=299.00 Aligned_cols=383 Identities=14% Similarity=0.142 Sum_probs=218.5
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~ 96 (478)
.+++++|+|++|+++++ ..+++|+|+||||++|++..+. ..++++||++|++|+|||||+|+|+....+.
T Consensus 24 ~~~~~li~n~~v~~~~~----~~~~~V~I~~grI~~Ig~~~~~-----~~~~~vID~~G~~v~PGlID~H~H~~~~~~~- 93 (501)
T 2vm8_A 24 TSDRLLIKGGKIVNDDQ----SFYADIYMEDGLIKQIGENLIV-----PGGVKTIEAHSRMVIPGGIDVHTRFQMPDQG- 93 (501)
T ss_dssp -CCCEEEEEEEEECSSC----EEEEEEEEETTEEEEEESSCCC-----CSSSCEEECTTCEEEECEEEEEECTTCEETT-
T ss_pred CcCCEEEEeeEEECCCC----ceEeeEEEECCEEEEeccCCCC-----CCCCeEEECCCCEEeeCEEEeeecccccccC-
Confidence 34689999999997542 3568999999999999975321 1245899999999999999999999542210
Q ss_pred ccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc----CHHHHHHHHHH----hCCeEEEec
Q 011766 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVEL----LGLRACLVQ 168 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~----~~~~~~~~~~~----~g~~~~~~~ 168 (478)
..+.++. ....++++++||||++++... ......+.... .....+ +
T Consensus 94 --------------------~~~~e~~----~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g- 147 (501)
T 2vm8_A 94 --------------------MTSADDF----FQGTKAALAGGTTMIIDHVVPEPGTSLLAAFDQWREWADSKSCCDY-S- 147 (501)
T ss_dssp --------------------EECSSCH----HHHHHHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHHHHCSSEE-E-
T ss_pred --------------------CCcHHHH----HHHHHHHHhCCcEEEEeCCCCCCCCChHHHHHHHHHHHhcCCeeEE-E-
Confidence 0011111 123457899999999986432 12222222111 111111 1
Q ss_pred ccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcC
Q 011766 169 STMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK 248 (478)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~ 248 (478)
....... + ...... +..+++++ .+...++.+..+......+.+.+.++++.+++++
T Consensus 148 -~~~~~~~----~----~~~~~~------------e~~~l~~~---~G~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g 203 (501)
T 2vm8_A 148 -LHVDISE----W----HKGIQE------------EMEALVKD---HGVNSFLVYMAFKDRFQLTDCQIYEVLSVIRDIG 203 (501)
T ss_dssp -EEEECCS----C----SHHHHH------------HHHHHHHH---SCCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHT
T ss_pred -EEEEecC----C----CcccHH------------HHHHHHHh---CCceEEEEeeccCCCCCCCHHHHHHHHHHHHHhC
Confidence 0000000 0 000011 33333332 3344566555444445678899999999999999
Q ss_pred CceeEeccCChhhhHHHhh--hcCCCC--------c------hH-HHHhhhCCCCCCeeeeeeccCC-hhHHHHHHhcCC
Q 011766 249 TGIHMHVAEIPYENQVVMD--TRKVDH--------G------TV-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAGV 310 (478)
Q Consensus 249 ~~v~~H~~~~~~~~~~~~~--~~~~~~--------~------~~-~~l~~~~~~~~~~~i~h~~~~~-~~~~~~~~~~~~ 310 (478)
.++.+|+.+.......... ..+... . .+ ..+......+.+..+.|+.... .+.++.+++.|+
T Consensus 204 ~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~g~~~hi~h~~~~~~~~~i~~~~~~G~ 283 (501)
T 2vm8_A 204 AIAQVHAENGDIIAEEQQRILDLGITGPEGHVLSRPEEVEAEAVNRAITIANQTNCPLYITKVMSKSSAEVIAQARKKGT 283 (501)
T ss_dssp CEEEEECCCHHHHHHHHHHHHTTTCCSTHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEEEECCHHHHHHHHHHHHTTC
T ss_pred CEEEEEccChHHHHHHHHHHHhcCCCChhhccccCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCcHHHHHHHHHHHhCCC
Confidence 9999999753321111111 111100 0 00 1111111223456666665321 233445577787
Q ss_pred eEEECccchh--------------h----c----------cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCH-----H---
Q 011766 311 KVSHCPASAM--------------R----M----------LGFAPIKEMLHADICVSLGTDGAPSNNRMSI-----V--- 354 (478)
Q Consensus 311 ~~~~~p~~~~--------------~----~----------~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~-----~--- 354 (478)
.+. ++.... . . .+..++.++++.|+.+++|||+.+.....++ +
T Consensus 284 ~v~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~pp~r~~~~~~~~l~~~l~~G~~~~~gtD~~~~~~~~~~~~~~~~~~~ 362 (501)
T 2vm8_A 284 VVY-GEPITASLGTDGSHYWSKNWAKAAAFVTSPPLSPDPTTPDFLNSLLSCGDLQVTGSAHCTFNTAQKAVGKDNFTLI 362 (501)
T ss_dssp CEE-EEEBHHHHHCCGGGGGCSSHHHHHHTCCSSCCCSCTTHHHHHHHHHHHTSSCCCBCCBCCCCHHHHGGGSSCGGGS
T ss_pred cEE-EEEChhHhhcChhhhcccccccCceEEECCCCCCCcchHHHHHHHHhcCceEEEEecCCCCChhhhhcccCChhhC
Confidence 652 332110 0 0 0112344689999999999998654211000 0
Q ss_pred ------HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcC
Q 011766 355 ------DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVH 428 (478)
Q Consensus 355 ------~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~ 428 (478)
.++++...... .....++|++++++++|.|||+++|+++++|+|++|++|||||||.++....+..
T Consensus 363 ~~G~~g~e~~l~~~~~~--------~~~~~~l~~~~~l~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~ 434 (501)
T 2vm8_A 363 PEGTNGTEERMSVIWDK--------AVVTGKMDENQFVAVTSTNAAKVFNLYPRKGRIAVGSDADLVIWDPDSVKTISAK 434 (501)
T ss_dssp CCCBCCTTTHHHHHHHH--------HTTTTSSCHHHHHHHHTHHHHHHHTCTTTSSCCCTTSBCCEEEEEEEEEEECCTT
T ss_pred CCCCccHHHHHHHHHHH--------HHHcCCCCHHHHHHHHhHhHHHHhCCCCCCCccCCCCcCCEEEEcCCCCeeeccc
Confidence 01111111110 0123469999999999999999999987899999999999999999854333322
Q ss_pred Chhhhhhhcc-----CCCCeeEEEEccEEEEECCeee-cccHHHHH
Q 011766 429 DRITSLVYCM-----RTENVVSVMCNGQWVMKNKKIL-LLMRGRLF 468 (478)
Q Consensus 429 d~~~~~~~~~-----~~~~v~~v~v~G~~v~~~g~~~-~~~~~~~~ 468 (478)
+..+...+.. ....|..||++|++|+++|+++ ....|+++
T Consensus 435 ~~~s~~~~~~~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~l 480 (501)
T 2vm8_A 435 THNSSLEYNIFEGMECRGSPLVVISQGKIVLEDGTLHVTEGSGRYI 480 (501)
T ss_dssp TSSSSCSCCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCCCBC
T ss_pred cccccccCCCccCcEeCceEEEEEECCEEEEECCeEccCCCCCcee
Confidence 2221111100 0246899999999999999998 44445544
No 40
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=100.00 E-value=5.6e-34 Score=283.55 Aligned_cols=357 Identities=18% Similarity=0.184 Sum_probs=210.8
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~ 96 (478)
++++++|+|++|++++ .....+++|+|+||+|++|++... ..+.++||++|++|+|||||+|+|+.....
T Consensus 45 ~mm~~~i~~~~v~~~~--~~~~~~~~v~i~~g~I~~i~~~~~------~~~~~~iD~~g~~v~PGlID~H~H~~~~~~-- 114 (467)
T 1xrt_A 45 WMLKLIVKNGYVIDPS--QNLEGEFDILVENGKIKKIDKNIL------VPEAEIIDAKGLIVCPGFIDIHVHLRDPGQ-- 114 (467)
T ss_dssp -CCEEEEESCEEEEGG--GTEEEECEEEEETTEEEEEESSCC------CSSEEEEECTTSEEEECEEEEEECCCTTTC--
T ss_pred ceeeEEEEeeEEECCC--CCceecceEEEECCEEEEecCCCC------CCCCcEEeCCCCEEccCEEEEeecccCCCC--
Confidence 4567899999999754 235678899999999999987432 124579999999999999999999943110
Q ss_pred ccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC--------HHHHHHHHHHhC-CeEEEe
Q 011766 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------VSEMAKAVELLG-LRACLV 167 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~--------~~~~~~~~~~~g-~~~~~~ 167 (478)
.| .++ .....+.++++|||++++++... .....+.....| ++.+..
T Consensus 115 --------~~-------------~~~----~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 169 (467)
T 1xrt_A 115 --------TY-------------KED----IESGSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKSKSVGLCRVLPT 169 (467)
T ss_dssp --------TT-------------TCC----HHHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEEC
T ss_pred --------Cc-------------hhh----HHHHHHHHHhCCeEEEEecCCCCCCCChHHHHHHHHHHhcccCcceEEEE
Confidence 00 011 11234557999999999976422 233444555566 554322
Q ss_pred cccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHc
Q 011766 168 QSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 247 (478)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~ 247 (478)
.. ..... ...... +..++++. +... ++.+..+..+.+.+.++++.|+++
T Consensus 170 g~-------~~~~~----~~~~~~------------~~~~l~~~----g~~~----i~~~~~~~~~~e~l~~~~~~A~~~ 218 (467)
T 1xrt_A 170 GT-------ITKGR----KGKEIA------------DFYSLKEA----GCVA----FTDDGSPVMDSSVMRKALELASQL 218 (467)
T ss_dssp BC-------SBGGG----CSSSBC------------CHHHHHHH----TCCC----BCCTTSCCCCHHHHHHHHHHHHHH
T ss_pred ee-------ecCCC----CcccHH------------HHHHHHHc----CCEE----EEcCCCCCCCHHHHHHHHHHHHhc
Confidence 11 11110 011122 34444432 1111 333444567889999999999999
Q ss_pred CCceeEeccCChhhhHHHh-h----hc---CCC--CchHH---HHhhhCCCCCCeeeeeeccCCh----hHHHHHHhcC-
Q 011766 248 KTGIHMHVAEIPYENQVVM-D----TR---KVD--HGTVT---FLDKIEFLQNNLLSAHTVWVNH----TEIGLLSRAG- 309 (478)
Q Consensus 248 ~~~v~~H~~~~~~~~~~~~-~----~~---~~~--~~~~~---~l~~~~~~~~~~~i~h~~~~~~----~~~~~~~~~~- 309 (478)
|+++.+|+.+.......+. . .+ +.. ..... .+......+. ..|+.+++. +.++++++.|
T Consensus 219 g~~v~~H~~~~~~~~~~l~~g~~~~~~g~~~~~~~~e~~~~~~~~~~~~~~g~---~~hi~H~~~~~~~~~i~~~~~~G~ 295 (467)
T 1xrt_A 219 GVPIMDHCEDDKLAYGVINEGEVSALLGLSSRAPEAEEIQIARDGILAQRTGG---HVHIQHVSTKLSLEIIEFFKEKGV 295 (467)
T ss_dssp TCEEEECCCGGGGTC--------------------CHHHHHHHHHHHHHHHCC---EEEESCCCSHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCHHHHHHHHhcCccchhcccccCChHHHHHHHHHHHHHHHHhCC---CEEEEeCCCHHHHHHHHHHHhcCC
Confidence 9999999987543211110 0 00 000 00000 0111111122 345555543 3445555788
Q ss_pred -CeEEECccchhh-------------c-------cCCCcHHHHHHCCCcEEEcCCCCCCCCCc-CHHHHH---------H
Q 011766 310 -VKVSHCPASAMR-------------M-------LGFAPIKEMLHADICVSLGTDGAPSNNRM-SIVDEM---------Y 358 (478)
Q Consensus 310 -~~~~~~p~~~~~-------------~-------~~~~~~~~~~~~gv~v~~gsD~~~~~~~~-~~~~~~---------~ 358 (478)
+.+.+||..... . ....+++.+++.|+++++|||+.+..... ++|.++ .
T Consensus 296 ~v~~~~~p~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~Gv~~~lgTD~~~~~~~~~~~~~~~~~g~~g~e~~ 375 (467)
T 1xrt_A 296 KITCEVNPNHLLFTEREVLNSGANARVNPPLRKKEDRLALIEGVKRGIIDCFATDHAPHQTFEKELVEFAMPGIIGLQTA 375 (467)
T ss_dssp CEEEEECGGGGC----------------------CCHHHHHHHHHHTCSCEECCCBCCCCC-----------CCCCGGGH
T ss_pred cEEEeccHHHHhcCHhHhhccCceEEEcCCCCCHHHHHHHHHHHhCCceEEEeeCCCCCChhHhcccccCCCCCccHHHH
Confidence 557788864211 0 11234577889999999999987653321 112211 1
Q ss_pred HHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCc--------CCh
Q 011766 359 LASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPV--------HDR 430 (478)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~--------~d~ 430 (478)
...... .. ....+|++++++++|.|||+++|++ +|+|++|++|||||+|.++....+. .+|
T Consensus 376 l~~~l~-~~--------~~g~ls~~~al~~aT~n~A~~lgl~--~G~I~~G~~ADlvvld~~~~~~i~~~~~~~~~~~~p 444 (467)
T 1xrt_A 376 LPSALE-LY--------RKGIISLKKLIEMFTINPARIIGVD--LGTLKLGSPADITIFDPNKEWILNEETNLSKSRNTP 444 (467)
T ss_dssp HHHHHH-HH--------HTTSSCHHHHHHHHTHHHHHHHTCS--CSCCCTTSBCCEEEEEEEEEEECSTTTCCSSCCCCT
T ss_pred HHHHHH-HH--------HcCCCCHHHHHHHhccCHHHHhCCC--cccccCCCCCCEEEEeCCCCEEEChHHccCcCCCCC
Confidence 111110 00 0123999999999999999999995 7999999999999999885322221 233
Q ss_pred hhhhhhccCCCCeeEEEEccEEEEEC
Q 011766 431 ITSLVYCMRTENVVSVMCNGQWVMKN 456 (478)
Q Consensus 431 ~~~~~~~~~~~~v~~v~v~G~~v~~~ 456 (478)
+..+.. ..+|..||++|++||+|
T Consensus 445 ~~g~~~---~~~V~~viv~G~~v~~~ 467 (467)
T 1xrt_A 445 LWGKVL---KGKVIYTIKDGKMVYKD 467 (467)
T ss_dssp TTTCEE---EEEEEEEEETTEEEEEC
T ss_pred ccCCEE---eEEEEEEEECCEEEecC
Confidence 332211 35799999999999985
No 41
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=100.00 E-value=2.5e-34 Score=284.93 Aligned_cols=379 Identities=14% Similarity=0.166 Sum_probs=216.5
Q ss_pred CCCccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhh
Q 011766 14 SLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQL 93 (478)
Q Consensus 14 ~~~~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~ 93 (478)
....+++++|+|++|+++++ ..+++|+|+||+|++|++..+ ...++||++|++|+|||||+|+|+....
T Consensus 18 ~g~m~~~~~i~~~~v~~~~~----~~~~~v~i~~g~I~~i~~~~~-------~~~~~id~~g~~v~PG~iD~H~H~~~~g 86 (473)
T 3e74_A 18 QGHMSFDLIIKNGTVILENE----ARVVDIAVKGGKIAAIGQDLG-------DAKEVMDASGLVVSPGMVDAHTHISEPG 86 (473)
T ss_dssp ----CEEEEEESCEEECSSC----EEECEEEEETTEEEEEESCCC-------CEEEEEECTTCEEEECEEEEEECC----
T ss_pred hccCcCCEEEEeeEEECCCC----ceeeeEEEECCEEEEEcCCCC-------CCCcEEECCCCEEecCEEEEecccCCCC
Confidence 33455789999999997643 457899999999999998543 1258999999999999999999984321
Q ss_pred hccccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCC-ccC-----HHHHHHHHHHhCCeEEEe
Q 011766 94 AKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQH-----VSEMAKAVELLGLRACLV 167 (478)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~-~~~-----~~~~~~~~~~~g~~~~~~ 167 (478)
. .. ........+.++++|||++++++ ... ............-.....
T Consensus 87 ~------------------------~~---~~~~~~~~~~~~~~G~Tt~~~~~~~t~p~~~~~~~~~~~~~~a~~~~~~d 139 (473)
T 3e74_A 87 R------------------------SH---WEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTID 139 (473)
T ss_dssp --------------------------------CHHHHHHHHHHTTEEEEEECCSSSSSCSCSHHHHHHHHHHHTTTCSSE
T ss_pred C------------------------Cc---HHHHHHHHHHHHhCCEEEEEcCcccCCCCcccHHHHHHHHHHhccCCeEE
Confidence 0 00 01112244567999999999987 322 222222222211111111
Q ss_pred cccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEec-------cccccCCHHHHHHH
Q 011766 168 QSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGI-------RQIMNATDRLLLET 240 (478)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~ 240 (478)
...... .+..... +..++.+. +...++.+... +..+..+++.+.++
T Consensus 140 ~~~~~~-----------~~~~~~~------------~l~~l~~~----G~~~~K~~~~~~~~~~~~~~~~~~~~~~l~~~ 192 (473)
T 3e74_A 140 AAQLGG-----------LVSYNID------------RLHELDEV----GVVGFKCFVATCGDRGIDNDFRDVNDWQFFKG 192 (473)
T ss_dssp EEECEE-----------CCTTCTT------------THHHHHHH----TCSCEEEEC------------CCCCHHHHHHH
T ss_pred EEEEee-----------cccchHH------------HHHHHHHc----CCCEEEEeccccCCcccccccCCCCHHHHHHH
Confidence 000000 0011122 44444433 33445544432 34556788999999
Q ss_pred HHHHHHcCCceeEeccCChhhhHH---Hhh---------hcCCCC----chH-HHHhhhCCCCCCeeeeeeccCC-hhHH
Q 011766 241 RDMAREFKTGIHMHVAEIPYENQV---VMD---------TRKVDH----GTV-TFLDKIEFLQNNLLSAHTVWVN-HTEI 302 (478)
Q Consensus 241 ~~~a~~~~~~v~~H~~~~~~~~~~---~~~---------~~~~~~----~~~-~~l~~~~~~~~~~~i~h~~~~~-~~~~ 302 (478)
++.+++.|.++.+|+.+....... ... ...... ..+ ..+......+.+..+.|..... -+.+
T Consensus 193 ~~~a~~~g~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~l~la~~~g~~lhi~Hvst~~~l~li 272 (473)
T 3e74_A 193 AQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVSSPEGVEEV 272 (473)
T ss_dssp HHHHHHHTCCEEEECSCHHHHHHHHHHHHHHTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEECSCCSHHHHHHH
T ss_pred HHHHHhcCCeEEEEecCHHHHHHHhhHHHhcCCcChhhcccCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHH
Confidence 999999999999998864221110 000 000000 001 1122222223445455544211 1345
Q ss_pred HHHHhcCC--eEEECccchhh-----------ccCCC---------cHHHHHHCCCcEEEcCCCCCCCCCcC---HH---
Q 011766 303 GLLSRAGV--KVSHCPASAMR-----------MLGFA---------PIKEMLHADICVSLGTDGAPSNNRMS---IV--- 354 (478)
Q Consensus 303 ~~~~~~~~--~~~~~p~~~~~-----------~~~~~---------~~~~~~~~gv~v~~gsD~~~~~~~~~---~~--- 354 (478)
+.+++.|. .+.+||..... ..-.+ .+.++++.|+.++++||+.+...... ++
T Consensus 273 ~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~~~~i~tDh~p~~~~~k~~~f~~~~ 352 (473)
T 3e74_A 273 TRARQEGQDITCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMKAW 352 (473)
T ss_dssp HHHHHTTCCEEEEECTHHHHCCHHHHHHHCGGGCCSSCCCCHHHHHHHHHHHHTTCCCEECCCBCCCCTTTTCSCTTTSC
T ss_pred HHHHHcCCCeEEEEchHhhhcCHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHhCCCCcEEEeCCCCCCHHHcccChhhcC
Confidence 55666664 45677754321 01122 34466789999999999977642210 00
Q ss_pred -----HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcC-
Q 011766 355 -----DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVH- 428 (478)
Q Consensus 355 -----~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~- 428 (478)
-+.....+.... ....++|++++++++|.|||+++|++ ++|+|++|++|||||+|.+..+..+.+
T Consensus 353 ~G~~g~e~~l~~~~~~~--------~~~~~~~~~~~~~~~t~~~a~~~g~~-~~G~l~~G~~AD~vv~d~~~~~~~~~~~ 423 (473)
T 3e74_A 353 GGIAGLQSCMDVMFDEA--------VQKRGMSLPMFGKLMATNAADIFGLQ-QKGRIAPGKDADFVFIQPNSSYVLTNDD 423 (473)
T ss_dssp CCBCCGGGHHHHHHHHH--------TTTTCCCHHHHHHHHTHHHHHHTTCT-TSSCCSTTSBCCEEEEESSCCEECCGGG
T ss_pred CCcccHHhHHHHHHHHH--------HHcCCCCHHHHHHHHhHHHHHHhCCC-CCCccCCCCccCEEEEeCCCCEEECHHH
Confidence 011111111100 12346999999999999999999996 479999999999999998743222211
Q ss_pred -------ChhhhhhhccCCCCeeEEEEccEEEEE-CCeeecccHHHHHH
Q 011766 429 -------DRITSLVYCMRTENVVSVMCNGQWVMK-NKKILLLMRGRLFQ 469 (478)
Q Consensus 429 -------d~~~~~~~~~~~~~v~~v~v~G~~v~~-~g~~~~~~~~~~~~ 469 (478)
+|+... ....+|..||++|++||+ +|++++...|++++
T Consensus 424 ~~~~~~~sp~~g~---~~~g~v~~t~v~G~~v~~~~g~~~~~~~G~~~~ 469 (473)
T 3e74_A 424 LEYRHKVSPYVGR---TIGARITKTILRGDVIYDIEQGFPVAPKGQFIL 469 (473)
T ss_dssp CCSSSCCCTTTTC---EESCEEEEEEETTEEEEETTTBCCSCCCCCEEC
T ss_pred ccccCCCCCCCCC---EEeeEEEEEEECCEEEEecCCeEccCCCceeec
Confidence 122211 113579999999999999 99998776676653
No 42
>1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C*
Probab=100.00 E-value=4.3e-33 Score=279.31 Aligned_cols=329 Identities=16% Similarity=0.145 Sum_probs=207.0
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhh-------hhhccCCCeEEeCCCCEEeeccccccccc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL-------QQFSQMADQIIDLQSQILLPGFVNTHVHT 89 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~-------~~~~~~~~~viD~~G~~v~PGfID~H~H~ 89 (478)
..++++|+|++|+++. . +.+++|+|+||||++||+..... ......++++||++|++|+|||||+|+|+
T Consensus 64 ~~~dllI~n~~Vid~~---g-i~~~dI~I~dGrI~~IG~~~~~~~~~~~~~~~~~~~~~evIDa~G~iV~PGlID~HvHl 139 (569)
T 1e9y_B 64 EELDLIITNALIVDYT---G-IYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHF 139 (569)
T ss_dssp TCCSEEEEEEEEEETT---E-EEEEEEEEETTEEEEEECCBCTTTSSSCCGGGBCCTTCEEEECTTCEEEECEEEEEEET
T ss_pred ccCCEEEEeeEEECCC---C-cEeeeEEEECCEEEEeecCCCccccccccccccCCCCCeEEECCCCEEecCEEEEeecC
Confidence 3578999999999742 2 46789999999999999753210 00012356899999999999999999998
Q ss_pred chhhhccccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC------------H---HHHH
Q 011766 90 SQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH------------V---SEMA 154 (478)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~------------~---~~~~ 154 (478)
.. +. ...+++++||||+++++... . ....
T Consensus 140 ~~----------------------------p~--------~~~~al~~GvTTv~d~g~~p~~~t~~~~~~~g~~~l~~~~ 183 (569)
T 1e9y_B 140 IS----------------------------PQ--------QIPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWML 183 (569)
T ss_dssp TC----------------------------TT--------HHHHHHHTTEEEEEEECCSSCHHHHHCCCCCHHHHHHHHH
T ss_pred CC----------------------------cH--------HHHHHHhCCeeEEEcCCcCCCCCCcCcccCCcHHHHHHHH
Confidence 21 00 03568999999999975311 1 1122
Q ss_pred HHHHHhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCH
Q 011766 155 KAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATD 234 (478)
Q Consensus 155 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (478)
+.....+++..... .+. ..... ...+.++ .+... +.++..+..++
T Consensus 184 ~a~~~~~~~~~~~g------~g~---------~~~~~------------~l~e~~~----~Ga~g----ik~~~~~~~t~ 228 (569)
T 1e9y_B 184 RAAEEYSMNLGFLA------KGN---------ASNDA------------SLADQIE----AGAIG----FKIHEDWGTTP 228 (569)
T ss_dssp HHHTTSSSEEEEEE------ECC---------CSCHH------------HHHHHHH----TTCSE----EEECGGGCCCH
T ss_pred HHhcccCceEEEEC------CCC---------cCCHH------------HHHHHHH----cCCCE----EEecCCCCCCH
Confidence 33333344432110 000 00001 2333332 22222 33444556789
Q ss_pred HHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCC----hhHHHHHHhcCC
Q 011766 235 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN----HTEIGLLSRAGV 310 (478)
Q Consensus 235 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~----~~~~~~~~~~~~ 310 (478)
+.+.++++.|+++|+++++|+.+...... ....+... .+.+..+.|..... ++.++++++.++
T Consensus 229 e~l~~~l~~A~~~g~~V~iHa~~~~e~g~-----------~~~~la~~--~g~~~hi~H~~~~~~~~~~d~I~~~~~~gv 295 (569)
T 1e9y_B 229 SAINHALDVADKYDVQVAIHTDTLNEAGC-----------VEDTMAAI--AGRTMHTFHTEGAGGGHAPDIIKVAGEHNI 295 (569)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCTTCSSCC-----------HHHHHHHH--TTCCEEETTTTSTTSCSTTTGGGGGGSTTE
T ss_pred HHHHHHHHHHHHhCCEEEEEcCCcccchH-----------HHHHHHHH--cCCCEEEEEcccCcccccHHHHHHHHHcCC
Confidence 99999999999999999999975221100 11112111 23445566666554 678899988887
Q ss_pred eEEECccch-----------------hhcc-----------------CCCcHHHHHHCCCcEEEcCCCCCCCCC----cC
Q 011766 311 KVSHCPASA-----------------MRML-----------------GFAPIKEMLHADICVSLGTDGAPSNNR----MS 352 (478)
Q Consensus 311 ~~~~~p~~~-----------------~~~~-----------------~~~~~~~~~~~gv~v~~gsD~~~~~~~----~~ 352 (478)
..+.++... .... ...+++.+.+.|+.+++|||+++.... .+
T Consensus 296 ~~~~~~ptl~~t~~~~~~~~d~~~v~h~l~~~~~ed~~~~~~rlr~~~~a~~~~L~d~Gv~v~iGSD~~~~~~~g~~~~~ 375 (569)
T 1e9y_B 296 LPASTNPTIPFTVNTEAEHMDMLMVCHHKDKSIKEDVQFADSRIRPQTIAAEDTLHDMGAFSITSSDSQAMGRVGEVITR 375 (569)
T ss_dssp EEEECGGGCSCBTTHHHHHHHHHHHTTTCCSSCHHHHHHHHHHCCHHHHHHHHHHHHTTSCCEECCCTTSSCCTTSHHHH
T ss_pred eeEeeCCccccccchhhhhhchhhhhhhcCcccHHHHHHhhcchhhhHHHHHHHHHhCCCEEEEeCCCCccCcccccccc
Confidence 444432211 0000 112234566789999999999765321 12
Q ss_pred HHH---HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCC
Q 011766 353 IVD---EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHD 429 (478)
Q Consensus 353 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d 429 (478)
+|. .+.. ..+ ........+.+++++++++++|.|||+++|+++++|+|++||.|||||||.+++
T Consensus 376 ~~~~~~~~~~----~~G--~l~~~~~~~~~ls~~~al~~~T~npA~~lGl~~~~GsIe~Gk~ADlvv~d~~~~------- 442 (569)
T 1e9y_B 376 TWQTADKNKK----EFG--RLKEEKGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFF------- 442 (569)
T ss_dssp HHHHHHHHHH----HHC--SCSSCCSSSCHHHHHHHHGGGTHHHHHHTTCTTTSSSSCTTSBCCEEEECTTTT-------
T ss_pred hhhHHHHhHh----hcc--CcchhhccccCCCHHHHHHHHhHHHHHHcCCCCCccCcCCCCCCCEEEECchhc-------
Confidence 232 2211 000 110001134579999999999999999999988899999999999999999843
Q ss_pred hhhhhhhccCCCCeeEEEEccEEEEEC
Q 011766 430 RITSLVYCMRTENVVSVMCNGQWVMKN 456 (478)
Q Consensus 430 ~~~~~~~~~~~~~v~~v~v~G~~v~~~ 456 (478)
..++..||++|++++.+
T Consensus 443 ----------~~~v~~v~~~G~iv~~~ 459 (569)
T 1e9y_B 443 ----------GVKPNMIIKGGFIALSQ 459 (569)
T ss_dssp ----------TTCCSEEEETTEEEEEE
T ss_pred ----------CCCccEEEECCEEEEcC
Confidence 25899999999999976
No 43
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=100.00 E-value=2.9e-34 Score=278.42 Aligned_cols=347 Identities=15% Similarity=0.104 Sum_probs=209.4
Q ss_pred cceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCC-CEEeecccccccccchhhhcc
Q 011766 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQS-QILLPGFVNTHVHTSQQLAKG 96 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G-~~v~PGfID~H~H~~~~~~~~ 96 (478)
+++++|+|++|+++ . +++|+|+||||++|++... ..+.++||++| ++|+|||||+|+|+.....
T Consensus 4 ~~~~~i~~~~v~~~--~-----~~~v~i~~g~I~~ig~~~~------~~~~~~iD~~g~~~v~PG~ID~H~H~~~~~~-- 68 (379)
T 2ics_A 4 DYDLLIKNGQTVNG--M-----PVEIAIKEKKIAAVAATIS------GSAKETIHLEPGTYVSAGWIDDHVHCFEKMA-- 68 (379)
T ss_dssp CEEEEEEEEECTTS--C-----EEEEEEETTEEEEEESCCC------CCEEEEEECCTTCEEEECEEEEEECCCTTSS--
T ss_pred cccEEEECCEEEcC--C-----cceEEEECCEEEEecCCCC------CCCCcEEeCCCCEEEccCEEEeccccCccCc--
Confidence 46889999999963 2 4699999999999987431 12457999999 9999999999999954210
Q ss_pred ccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCc---cCHHHHHHHHHHhCCe--EEEecccc
Q 011766 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGLR--ACLVQSTM 171 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~---~~~~~~~~~~~~~g~~--~~~~~~~~ 171 (478)
.. .. ...++++++||||+++++. .......+..+..+.+ .++....
T Consensus 69 ------------------~~-~~---------~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~- 119 (379)
T 2ics_A 69 ------------------LY-YD---------YPDEIGVKKGVTTVIDAGTTGAENIHEFYDLAQQAKTNVFGLVNISK- 119 (379)
T ss_dssp ------------------SS-CC---------CHHHHTGGGTEEEEEEESSSCTTTHHHHHHHHHTSSSEEEEEEESST-
T ss_pred ------------------cc-cC---------chhhhHhhCceeEEEcCCCCCccCHHHHHHHHHhhcccEEEEccccc-
Confidence 00 00 0113578999999998653 2234455555555532 2222111
Q ss_pred cCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHH-cCCc
Q 011766 172 DCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMARE-FKTG 250 (478)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~-~~~~ 250 (478)
.+..+. .. ..... .......++.++++. .+...++..........++.+.+.++++++++ .|++
T Consensus 120 ---~G~~~~--~~-~~~~~--------~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~ 184 (379)
T 2ics_A 120 ---WGIVAQ--DE-LADLS--------KVQASLVKKAIQELP-DFVVGIKARMSRTVIGDNGITPLELAKQIQQENQEIP 184 (379)
T ss_dssp ---TTTSSS--CT-TSSGG--------GCCHHHHHHHHHHCT-TTEEEEEEEESHHHHTTCTTHHHHHHHHHHHTTTTCC
T ss_pred ---cCCCCH--HH-HHHHH--------HHHHHHHHHHHHhhh-CcceEEEEeccccccccchHHHHHHHHHHHHHhcCCe
Confidence 111110 00 00000 001123444444321 11122333333333344677888899999999 9999
Q ss_pred eeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccC---------Ch---hHHHHHHhcCCeEEECccc
Q 011766 251 IHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV---------NH---TEIGLLSRAGVKVSHCPAS 318 (478)
Q Consensus 251 v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~---------~~---~~~~~~~~~~~~~~~~p~~ 318 (478)
+.+|+.+.....+...... .. + ..+.|+... ++ +++.++++.|+.+.++|..
T Consensus 185 v~~H~~~~~~~~~~~~~~~----------~~-g-----~~~~H~~~~~~~~~~~~s~~~~~~~~~~~~~~g~~~~~~p~~ 248 (379)
T 2ics_A 185 LMVHIGSAPPHLDEILALM----------EK-G-----DVLTHCFNGKENGILDQATDKIKDFAWQAYNKGVVFDIGHGT 248 (379)
T ss_dssp EEEEECSSSSCHHHHHHHC----------CT-T-----CEEESTTCCSTTSSEETTTTEECHHHHHHHHTTCEEECCCTT
T ss_pred EEEeCCCCcchHHHHHHHh----------hc-C-----CeeeeccCCCccchhhccCHHHHHHHHHHHHcCCEEEecCCC
Confidence 9999976432222111111 00 1 133444332 22 7888888999999998864
Q ss_pred hhhccCCCcHHHHHHCC-CcEEEcCCCCCC----CCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHH
Q 011766 319 AMRMLGFAPIKEMLHAD-ICVSLGTDGAPS----NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATING 393 (478)
Q Consensus 319 ~~~~~~~~~~~~~~~~g-v~v~~gsD~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~p 393 (478)
+.. +..+++++++.| +.++++||+.+. .....+...+.... . .++|++++++++|.||
T Consensus 249 ~~~--~~~~~~~~~~~G~~~~~l~TD~~~~~~~~~~~~~~~~~l~~~~--~-------------~~ls~~~~~~~~T~n~ 311 (379)
T 2ics_A 249 DSF--NFHVAETALREGMKAASISTDIYIRNRENGPVYDLATTMEKLR--V-------------VGYDWPEIIEKVTKAP 311 (379)
T ss_dssp TSC--CHHHHHHHHHTTCCCSBCCCCBCHHHHHSSSCCCHHHHHHHHH--H-------------HTCCHHHHHHTTTHHH
T ss_pred CCc--CHHHHHHHHHcCCCcceEeccCcccCCCCCcHhHHHHHHHHHH--H-------------cCCCHHHHHHHHHHHH
Confidence 422 345688899999 889999997521 01122333232211 1 1599999999999999
Q ss_pred HHHcCCCCCccccccCccccEEEEcCCCCCCCCcCCh-hhhhhhccCCCCeeEEEEccEEEEECCee
Q 011766 394 AKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDR-ITSLVYCMRTENVVSVMCNGQWVMKNKKI 459 (478)
Q Consensus 394 A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~-~~~~~~~~~~~~v~~v~v~G~~v~~~g~~ 459 (478)
|++||+++ +|+|++|++|||||+|.+..+.. ..+ ....++.....+|..||++|++||++|.+
T Consensus 312 A~~lgl~~-~G~l~~G~~ADlvv~d~~~~~~~--~~~~~g~~~~~~~~~~v~~t~v~G~~v~~~~~~ 375 (379)
T 2ics_A 312 AENFHLTQ-KGTLEIGKDADLTIFTIQAEEKT--LTDSNGLTRVAKEQIRPIKTIIGGQIYDNEGHH 375 (379)
T ss_dssp HHHTTCTT-SSSCCTTSBCCEEEEEEEEEEEE--EECTTSCEEEEEEEEEEEEEEETTEEEEC----
T ss_pred HHHhCCCC-CcCCCCCCccCEEEEecccccce--eecCCCCEEEeeeeeeeEEEEECCEEEecCCcc
Confidence 99999976 89999999999999997532211 111 11122221223899999999999999865
No 44
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=100.00 E-value=4.4e-33 Score=274.41 Aligned_cols=355 Identities=18% Similarity=0.174 Sum_probs=216.6
Q ss_pred eEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCC
Q 011766 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (478)
Q Consensus 21 ~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~ 100 (478)
++|+|++|++++ ....+++|+|+||+|++|++. .+.++||++|++|+|||||+|+|+.....
T Consensus 2 ~~i~~~~v~~~~---~~~~~~~v~i~~g~I~~i~~~---------~~~~~id~~g~~v~PG~iD~H~H~~~~~~------ 63 (426)
T 2z00_A 2 ILIRNVRLVDAR---GERGPADVLIGEGRILSLEGG---------EAKQVVDGTGCFLAPGFLDLHAHLREPGE------ 63 (426)
T ss_dssp EEEEEEEEEETT---EEEEEEEEEEETTEEEESBCC---------CCSEEEECTTCEEEECEEEEEECCCTTTC------
T ss_pred EEEEeeEEECCC---CceecceEEEECCEEEEEecC---------CCceEEeCCCCEEecCEEEeccccCCCCC------
Confidence 589999999743 356788999999999999864 14579999999999999999999954210
Q ss_pred CCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC--------HHHHHHHHHHhC-CeEEEecccc
Q 011766 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------VSEMAKAVELLG-LRACLVQSTM 171 (478)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~--------~~~~~~~~~~~g-~~~~~~~~~~ 171 (478)
.| .++ .....+.++++|||++++++... .....+..+..+ ++.+... .
T Consensus 64 ----~~-------------~~~----~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 120 (426)
T 2z00_A 64 ----EV-------------KED----LFSGLLAAVRGGYTDLVSMPNTKPPVDTPEAVRALKEKAKALGLARLHPAA-A- 120 (426)
T ss_dssp ----TT-------------TCC----HHHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHTSSEECCEE-C-
T ss_pred ----Cc-------------hHH----HHHHHHHHHhCCccEEEecCCCCCCcChHHHHHHHHHHhcccCcccEEEEE-E-
Confidence 00 011 11234568999999999976421 233444555556 5542211 1
Q ss_pred cCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCce
Q 011766 172 DCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGI 251 (478)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v 251 (478)
..+.. ...... +..++++. +.. .++.+..+..+++.+.++++.|+++|+++
T Consensus 121 -----~~~~~----~~~~~~------------~~~~l~~~------g~~--~i~~~~~~~~~~~~l~~~~~~a~~~g~~v 171 (426)
T 2z00_A 121 -----LTEKQ----EGKTLT------------PAGLLREA------GAV--LLTDDGRTNEDAGVLAAGLLMAAPLGLPV 171 (426)
T ss_dssp -----SBGGG----CSSSBC------------CHHHHHHH------TCC--EEECTTSCCCCHHHHHHHHHHHGGGTCCE
T ss_pred -----eecCC----ChhhHH------------HHHHHHHc------CCE--EEECCCcCCCCHHHHHHHHHHHHhhCCEE
Confidence 11100 111122 34444432 111 14445556778999999999999999999
Q ss_pred eEeccCChhhhHHHh---------hhcCCCC--c---hHHHHhhhCC------CCCCeeeeeeccCC-hhHHHHHHhcCC
Q 011766 252 HMHVAEIPYENQVVM---------DTRKVDH--G---TVTFLDKIEF------LQNNLLSAHTVWVN-HTEIGLLSRAGV 310 (478)
Q Consensus 252 ~~H~~~~~~~~~~~~---------~~~~~~~--~---~~~~l~~~~~------~~~~~~i~h~~~~~-~~~~~~~~~~~~ 310 (478)
.+|+.+......... ...+... . ....+..... .+.+..+.|+.... .+.++++++.|+
T Consensus 172 ~~H~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~e~~~~~~~~~~a~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~ 251 (426)
T 2z00_A 172 AVHAEDAGLRRNGVMNDGPLADLLGLPGNPPEAEAARIARDLEVLRYALRRSPATPRLHVQHLSTKRGLELVREAKRAGL 251 (426)
T ss_dssp EECCCCHHHHTTCSEECSHHHHHHTCCEECHHHHHHHHHHHHHHHHHHHHHCSSCCCEEETTCCCHHHHHHHHHHHHTTC
T ss_pred EEeCCCHHHHhhhhhccCccchhcccccCChHHHHHHHHHHHHHHhhccccccCCCcEEEEeCCCHHHHHHHHHHHHcCC
Confidence 999987543221000 0000000 0 0011112222 45677888987543 356777787876
Q ss_pred e--EEECccchhhc-----------cCCCcH---------HHHHHCCCcEEEcCCCCCCCCCc--CHH---------HHH
Q 011766 311 K--VSHCPASAMRM-----------LGFAPI---------KEMLHADICVSLGTDGAPSNNRM--SIV---------DEM 357 (478)
Q Consensus 311 ~--~~~~p~~~~~~-----------~~~~~~---------~~~~~~gv~v~~gsD~~~~~~~~--~~~---------~~~ 357 (478)
. +.+||.+.... ...+|+ .++++.|+.++++||+.+..... +++ .+.
T Consensus 252 ~v~~~~~p~~~~~~~~~~~~~~~~~~~~~plr~~~~~~~l~~~l~~G~~~~lgsD~~p~~~~~~~~~~~~~~~g~~~~~~ 331 (426)
T 2z00_A 252 PVTAEATPHHLTLTEEALRTFDPLFKVAPPLRGEEDREALLEGLLDGTLDAIATDHAPHTLAEKEKDLLRAPFGIPSLEV 331 (426)
T ss_dssp CEEEEECHHHHHCCGGGGGGCCGGGCCSSCCCCHHHHHHHHHHHHHTSSCEECCCBCCCCTTGGGSCTTTSCCCBCCTTT
T ss_pred CEEEEEchHHhEeCHhHhhccCceEEEeCCCCCHHHHHHHHHHHhCCCcEEEecCCCCCCHHHccCChhhCCCCcccHHH
Confidence 5 45688754321 123333 35566999999999985442210 000 001
Q ss_pred HHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCc-------CCh
Q 011766 358 YLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPV-------HDR 430 (478)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~-------~d~ 430 (478)
......... ...+++|++++++++|.|||+++|++ +|+|++|++|||||+|.+++...+. .+|
T Consensus 332 ~~~~~~~~~--------~~~~~ls~~~~l~~~T~n~A~~lgl~--~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~p 401 (426)
T 2z00_A 332 AFPLLYTEL--------HLKRGFPLQRLVELFTDGPRRVLGLP--PLHLEEGAEASLVLLSPKERPVDPSAFASKARYSP 401 (426)
T ss_dssp HHHHHHHHT--------HHHHCCCHHHHHHHHTHHHHHHHTCC--CCCSSTTSBCCEEEEECCCEECCGGGCSSSCCCCT
T ss_pred HHHHHHHHH--------HHcCCCCHHHHHHHHhhhHHHHhCCC--cccccCCCCCCEEEEeCCcEEEcHHHccccCCCCC
Confidence 111111100 01124999999999999999999994 8999999999999999965433221 123
Q ss_pred hhhhhhccCCCCeeEEEEccEEEEECCe
Q 011766 431 ITSLVYCMRTENVVSVMCNGQWVMKNKK 458 (478)
Q Consensus 431 ~~~~~~~~~~~~v~~v~v~G~~v~~~g~ 458 (478)
+..... ..+|.+||++|++||++++
T Consensus 402 ~~g~~~---~~~v~~t~v~G~~v~~~~~ 426 (426)
T 2z00_A 402 WAGWVL---GGWPVLTLVAGRIVHEALK 426 (426)
T ss_dssp TTTCEE---CCEEEEEEETTEEEEECCC
T ss_pred cCCCEE---EEEEEEEEECCEEEEecCC
Confidence 332211 3689999999999999875
No 45
>3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides}
Probab=100.00 E-value=1e-33 Score=274.70 Aligned_cols=381 Identities=15% Similarity=0.120 Sum_probs=200.3
Q ss_pred eeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccC
Q 011766 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (478)
Q Consensus 20 ~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~ 99 (478)
-.+|+|++|+|+.. ++++++++|+|+||||++||+..+. .+.++++||++|++|+|||||+|+|+......+...
T Consensus 3 ~~aI~narviD~~~-g~~i~~~~V~I~dG~I~~Ig~~~~~----~~~~~~vID~~G~~v~PG~ID~H~H~~~~~~~~~~~ 77 (403)
T 3mtw_A 3 IKAVSAARLLDVAS-GKYVDNPLVIVTDGRITSIGKKGDA----VPAGATAVDLPGVTLLPGLIDMHVHLDSLAEVGGYN 77 (403)
T ss_dssp EEEEEEEEEEETTT-TEEEESEEEEEETTEEEEEEETTCC----CCTTCEEEEEEEEEEEECEEEEEECTTCCTTCCGGG
T ss_pred cEEEEceEEEECCC-CcEecCcEEEEECCEEEEEeCCCCC----CCCCCEEEECCCCEEEeChheeeeCCccccccCccc
Confidence 35799999997643 4678999999999999999986542 124679999999999999999999986533221111
Q ss_pred CCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCHHHHHHHHHH-h-C---CeEEEecccccCC
Q 011766 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVEL-L-G---LRACLVQSTMDCG 174 (478)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~-~-g---~~~~~~~~~~~~~ 174 (478)
.. ..................+..++|+..+.+............. . . .............
T Consensus 78 ~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (403)
T 3mtw_A 78 SL---------------EYSDRFWSVVQTANAKKTLEAGFTTVRNVGAADYDDVGLREAIDAGYVPGPRIVTAAISFGAT 142 (403)
T ss_dssp GG---------------GSCHHHHHHHHHHHHHHHHHTTEEEEEECCCSTTHHHHHHHHHHTTSSCCCEEEECCSCEEST
T ss_pred cc---------------cccHHHHhhhhhhhhhhccccccceeeccccccccchhhhhhhhccccccccccccccccccc
Confidence 10 1111112222233445677889999888765443322211111 1 1 1111110000000
Q ss_pred CCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEE--------EeccccccCCHHHHHHHHHHHHH
Q 011766 175 EGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIW--------FGIRQIMNATDRLLLETRDMARE 246 (478)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~~~~a~~ 246 (478)
....... ............... ...+...........+....... ...........+.+.++++.+++
T Consensus 143 ~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 218 (403)
T 3mtw_A 143 GGHCDST---FFPPSMDQKNPFNSD-SPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHM 218 (403)
T ss_dssp TSTTSCC---SSCGGGCCCCTTCCC-SHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHH
T ss_pred ccccccc---ccccccccccccccc-hhHHHhhhhHhhhhhcchhhhhhhccccccccccccccccCHHHHHHHHHHHHH
Confidence 0000000 000000000000000 01112222222212221222111 11122334577889999999999
Q ss_pred cCCceeEeccCChhhhHHHhhhcCC----CCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhc
Q 011766 247 FKTGIHMHVAEIPYENQVVMDTRKV----DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM 322 (478)
Q Consensus 247 ~~~~v~~H~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 322 (478)
.+.++++|................. ............. ......+...............+.....++......
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (403)
T 3mtw_A 219 AGIKVAAHAHGASGIREAVRAGVDTIEHASLVDDEGIKLAVQ--KGAYFSMDIYNTDYTQAEGKKNGVLEDNLRKDRDIG 296 (403)
T ss_dssp TTCEEEEEECSHHHHHHHHHTTCSEEEECTTCCHHHHHHHHH--HTCEEECCCSTHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred cCCeEEEEeccchhHHHHHHhcccccccccccccchhhhhcc--ccceeeeeeccchhhhhhhhccccchhhcccccccc
Confidence 9999999997754433222110000 0000000000000 000111111111222222222222111111111111
Q ss_pred -cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 011766 323 -LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 401 (478)
Q Consensus 323 -~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~ 401 (478)
....+.+.+.+.|+.+.+|||.+.. ....++.++..... .|+|++|||+++|.|||+++|+++
T Consensus 297 ~~~~~~~~~~~~~g~~~~~gt~~~~~-~~~~~~~~~~~~~~---------------~gls~~eal~~~T~npA~~lgl~~ 360 (403)
T 3mtw_A 297 ELQRENFRKALKAGVKMVYGTDAGIY-PHGDNAKQFAVMVR---------------YGATPLQAIQSATLTAAEALGRSK 360 (403)
T ss_dssp HHHHHHHHHHHHHTCEEECCCCBTTB-CTTCGGGHHHHHHH---------------TTCCHHHHHHHTTHHHHHHHTCTT
T ss_pred ccccchhhHHHhcCCeEeeccCCccc-ccchHHHHHHHHHH---------------cCCCHHHHHHHHHHHHHHHhCCCC
Confidence 2234667888999999999998654 23344444443321 269999999999999999999999
Q ss_pred CccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEE
Q 011766 402 DIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVM 454 (478)
Q Consensus 402 ~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~ 454 (478)
++|+|++||+|||||||.||+ +|+.. ..+|.+||++|++|.
T Consensus 361 ~~GsI~~G~~ADlvvld~dPl-----~di~~-------~~~v~~Vi~~G~vvk 401 (403)
T 3mtw_A 361 DVGQVAVGRYGDMIAVAGDPL-----ADVTT-------LEKPVFVMKGGAVVK 401 (403)
T ss_dssp TSSSCCTTSBCCEEEESSCTT-----TCGGG-------GGSCSEEEETTEEEE
T ss_pred CceeeCCCCcceEEEECCChh-----HhHhh-------hcCcCEEEECCEEEe
Confidence 999999999999999999854 33211 147999999999653
No 46
>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis}
Probab=100.00 E-value=1.2e-32 Score=268.51 Aligned_cols=351 Identities=18% Similarity=0.196 Sum_probs=214.1
Q ss_pred ceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCC-CCEEeecccccccccchhhhccc
Q 011766 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQ-SQILLPGFVNTHVHTSQQLAKGI 97 (478)
Q Consensus 19 ~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~-G~~v~PGfID~H~H~~~~~~~~~ 97 (478)
++++|+|++|++++ ..+.+++|+|+||+|++|++.... . .+.++||++ |++|+|||||+|+|+....
T Consensus 3 ~~~li~~~~v~~~~---~~~~~~~v~I~~g~I~~ig~~~~~----~-~~~~viD~~~g~~v~PGlID~H~H~~~~~---- 70 (396)
T 2vhl_A 3 ESLLIKDIAIVTEN---EVIKNGYVGINDGKISTVSTERPK----E-PYSKEIQAPADSVLLPGMIDIHIHGGYGA---- 70 (396)
T ss_dssp CCEEEEEEEEECSS---CEEEEEEEEEETTEEEEEESSCCS----S-CCSEEEECCTTCEEEECEEEEEECEETTE----
T ss_pred ccEEEEeeEEEcCC---ccccCceEEEECCEEEEEECCCCC----C-CCCceEcCCCCCEEcCCEEEEeecCCcCc----
Confidence 57899999999754 255778999999999999832110 0 245899999 9999999999999995421
Q ss_pred cCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC-HHH-------HHHHHHH-h----CCeE
Q 011766 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-VSE-------MAKAVEL-L----GLRA 164 (478)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~-~~~-------~~~~~~~-~----g~~~ 164 (478)
++. ..+.++. ....++++++||||+++++... ... ..+.... . |...
T Consensus 71 ----~~~------------~~~~e~~----~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~~~ 130 (396)
T 2vhl_A 71 ----DTM------------DASFSTL----DIMSSRLPEEGTTSFLATTITQEHGNISQALVNAREWKAAEESSLLGAEL 130 (396)
T ss_dssp ----EGG------------GCSHHHH----HHHHHHGGGGTEEEEEEECCSCCHHHHHHHHHHHHHHHHHCSGGGSSSEE
T ss_pred ----ccc------------CCCHHHH----HHHHHHHHcCCeeEEEecccCCCHHHHHHHHHHHHHHHhcccccccccce
Confidence 000 1222222 2456789999999999976432 211 1112221 2 3212
Q ss_pred EEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEE-EeccccccCCHHHHHHHHHH
Q 011766 165 CLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIW-FGIRQIMNATDRLLLETRDM 243 (478)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~ 243 (478)
+... ..+....+........ ........+.++++...+.+.++.+ +.++.... .++++.
T Consensus 131 ~~~~---~~~~~~~~~~~g~~~~-----------~~~~~~~~~~~~~~~~~~~~~ik~~~~~p~~~~~------~~~~~~ 190 (396)
T 2vhl_A 131 LGIH---LEGPFVSPKRAGAQPK-----------EWIRPSDVELFKKWQQEAGGLIKIVTLAPEEDQH------FELIRH 190 (396)
T ss_dssp EEEE---EECSSSCGGGCTTSCG-----------GGCCCCCHHHHHHHHHHTTTCEEEEEECGGGSGG------GHHHHH
T ss_pred EEEe---eecCccCccccCCCCH-----------HHccCCCHHHHHHHHHhcCCcceEEEECCCCCCH------HHHHHH
Confidence 1110 0111010000000000 0000012233333333334556532 33332221 256788
Q ss_pred HHHcCCceeE-eccCChhhhHHHhhhcCC---CCc-----hHHHHhhhCCC-----CCCe---eeeeeccCChhHHHHHH
Q 011766 244 AREFKTGIHM-HVAEIPYENQVVMDTRKV---DHG-----TVTFLDKIEFL-----QNNL---LSAHTVWVNHTEIGLLS 306 (478)
Q Consensus 244 a~~~~~~v~~-H~~~~~~~~~~~~~~~~~---~~~-----~~~~l~~~~~~-----~~~~---~i~h~~~~~~~~~~~~~ 306 (478)
+++.|+++++ |..+........... +. .|. ... ....+.+ ..+. ++.|+.++++++++.+.
T Consensus 191 a~~~g~~v~~gH~~~~~~~~~~a~~~-G~~~i~H~~~~~~~~~-~~~~G~~~~~~~~~~~~~e~~~h~~~l~~~~~~~~~ 268 (396)
T 2vhl_A 191 LKDESIIASMGHTDADSALLSDAAKA-GASHMTHLYNAMSPFH-HREPGVIGTALAHDGFVTELIADGIHSHPLAAKLAF 268 (396)
T ss_dssp HHHTTCEEEECSBCCCHHHHHHHHHT-TCCEESSTTSSBCCCC-SSSCHHHHHHHHCTTCEEEEECSSSSSCHHHHHHHH
T ss_pred HHHCCCEEeecccCCCHHHHHHHHHc-CCCEeEeCCccCcccc-cCCCCchhhhhcCCCcEEEEcCCccccCHHHHHHHH
Confidence 8999999998 998765544433321 11 000 000 0000000 0122 67899999999999888
Q ss_pred hc-CC-eEEECccchhhccCC-------CcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCC
Q 011766 307 RA-GV-KVSHCPASAMRMLGF-------APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDP 377 (478)
Q Consensus 307 ~~-~~-~~~~~p~~~~~~~~~-------~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (478)
+. +. .+..+|..... .+. .++..+.+.| .+.+ +|+...+...+++.+++.+...
T Consensus 269 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~g-~~~~-~d~~~~g~~~~l~~~l~~~~~~-------------- 331 (396)
T 2vhl_A 269 LAKGSSKLILITDSMRA-KGLKDGVYEFGGQSVTVRGR-TALL-SDGTLAGSILKMNEGARHMREF-------------- 331 (396)
T ss_dssp HHHCTTSEEEECCBCTT-TTSCSEEEEETTEEEEEETT-EEEC-TTSCBCSBCCCHHHHHHHHHHH--------------
T ss_pred hhcCCccEEEECcChhh-cCCCCceEEECCeEEEEECC-EEEe-CCCcccccccCHHHHHHHHHHh--------------
Confidence 77 65 47777765431 111 1334456677 6666 7765554556788888765531
Q ss_pred CCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECC
Q 011766 378 AALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNK 457 (478)
Q Consensus 378 ~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g 457 (478)
.++|++++++++|.|||++||+++++|+|++|++|||||+|.+ .+|..||++|++|++++
T Consensus 332 ~~~~~~~~l~~aT~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~--------------------~~v~~v~~~G~~v~~~~ 391 (396)
T 2vhl_A 332 TNCSWTDIANITSENAAKQLGIFDRKGSVTVGKDADLVIVSSD--------------------CEVILTICRGNIAFISK 391 (396)
T ss_dssp HCCCHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEECTT--------------------CCEEEEEETTEEEEECS
T ss_pred cCCCHHHHHHHHHHHHHHHhCCcCCCceeCCCCcCCEEEECCC--------------------CcEEEEEECCEEEEecc
Confidence 1499999999999999999999877999999999999999986 58999999999999999
Q ss_pred eee
Q 011766 458 KIL 460 (478)
Q Consensus 458 ~~~ 460 (478)
++-
T Consensus 392 ~~~ 394 (396)
T 2vhl_A 392 EAD 394 (396)
T ss_dssp CCC
T ss_pred ccc
Confidence 874
No 47
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=100.00 E-value=6.6e-33 Score=272.82 Aligned_cols=366 Identities=14% Similarity=0.152 Sum_probs=216.8
Q ss_pred ceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcccc
Q 011766 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (478)
Q Consensus 19 ~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~ 98 (478)
|+++|+|++|+|.+ ....+++|+|+||+|++|++..+ ..++++||++|++|+|||||+|+|+.....
T Consensus 1 m~~~i~~~~v~~~~---~~~~~~~v~i~~g~I~~i~~~~~------~~~~~~id~~g~~v~PG~iD~H~H~~~~~~---- 67 (428)
T 3mpg_A 1 MNYLFKNGRYMNEE---GKIVATDLLVQDGKIAKVAENIT------ADNAEVIDVNGKLIAPGLVDVHVHLREPGG---- 67 (428)
T ss_dssp CEEEEEEEEEECSS---SCEEEEEEEEESSBEEECCSSCC------CTTSEEEECTTCEEEECEEEEEECCCTTTC----
T ss_pred CcEEEEeeEEEeCC---CCeeeeeEEEECCEEEEecCCCC------CCCCeEEECCCCEEeeCEEEEeeccCCCCC----
Confidence 57899999999732 25677899999999999997542 135689999999999999999999843110
Q ss_pred CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC--------HHHHHHHHHHhCCeEEEeccc
Q 011766 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------VSEMAKAVELLGLRACLVQST 170 (478)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~ 170 (478)
...+. .....+.++++|||+++++.... .....+.....+...+.....
T Consensus 68 -------------------~~~~~----~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (428)
T 3mpg_A 68 -------------------EHKET----IETGTLAAAKGGFTTICAMPNTRPVPDCREHMEDLQNRIKEKAHVNVLPYGA 124 (428)
T ss_dssp -------------------TTTCC----HHHHHHHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECEE
T ss_pred -------------------CchhH----HHHHHHHHHhCCeEEEEeCCCCCCCCCcHHHHHHHHHHhcccCCcEEEEEee
Confidence 00111 12234557899999999975321 223344455556544433322
Q ss_pred ccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCc
Q 011766 171 MDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTG 250 (478)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~ 250 (478)
+..+ ....... +..++.+. + ... +..+..+..+++.+.++++.+++.|++
T Consensus 125 ~~~~----------~~~~~l~------------~~~~l~~~----G--~~~--~~~~~~~~~~~~~l~~~~~~a~~~g~~ 174 (428)
T 3mpg_A 125 ITVR----------QAGSEMT------------DFETLKEL----G--AFA--FTDDGVGVQDASMMLAAMKRAAKLNMA 174 (428)
T ss_dssp SBGG----------GCSSSBC------------CHHHHHHT----T--CCC--EECTTSCCCCHHHHHHHHHHHHHTTCC
T ss_pred EecC----------CCcchHH------------HHHHHHHh----C--CEE--EECCCcCCCCHHHHHHHHHHHHhcCCe
Confidence 2111 0111122 34444432 1 111 344566677899999999999999999
Q ss_pred eeEeccCChhhhHH-------Hhhh--cCCCCc----hH-HHHhhhCCCCCCeeeeeeccCC-hhHHHHHHhcCCe--EE
Q 011766 251 IHMHVAEIPYENQV-------VMDT--RKVDHG----TV-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAGVK--VS 313 (478)
Q Consensus 251 v~~H~~~~~~~~~~-------~~~~--~~~~~~----~~-~~l~~~~~~~~~~~i~h~~~~~-~~~~~~~~~~~~~--~~ 313 (478)
+.+|+.+....... .... .+.... .+ ..+......+.+..+.|+.... -+.++.+++.|+. +.
T Consensus 175 v~vH~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~g~~~~i~H~s~~~~~~~i~~a~~~G~~v~~e 254 (428)
T 3mpg_A 175 VVAHCEENTLINKGCVHEGKFSEKHGLNGIPSVCESVHIARDILLAEAADCHYHVCHVSTKGSVRVIRDAKRAGIKVTAE 254 (428)
T ss_dssp EEECCCCGGGCTTCSEETTHHHHHTTCCEECTHHHHHHHHHHHHHHHHHTCCEEECSCCCHHHHHHHHHHHHTTCCEEEC
T ss_pred EEEECCChhHhhhHHhhcCccchhhCcCCCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHhcCCCEEEE
Confidence 99999765321100 0000 000000 00 1111122233455666665321 2445566666655 44
Q ss_pred ECccchhhc--------------------cCCCcHHHHHHCCCcEEEcCCCCCCCCCcCH---H--------HHHHHHHH
Q 011766 314 HCPASAMRM--------------------LGFAPIKEMLHADICVSLGTDGAPSNNRMSI---V--------DEMYLASL 362 (478)
Q Consensus 314 ~~p~~~~~~--------------------~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~---~--------~~~~~~~~ 362 (478)
+||...... ....++.+++..|+.++++||+.++...... + .+......
T Consensus 255 ~~p~~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~i~tDh~p~~~~~k~~~~~~~p~g~~g~e~~~~~~ 334 (428)
T 3mpg_A 255 VTPHHLVLCEDDIPSADPNFKMNPPLRGKEDHEALIEGLLDGTIDMIATDHAPHTAEEKAQGIERAPFGITGFETAFPLL 334 (428)
T ss_dssp BCHHHHHCCGGGCCSSCGGGCCSSCCCCHHHHHHHHHHHHHTSSCCBCCCBCCCCTTGGGSCTTTSCSCCCCTTTHHHHH
T ss_pred EchHHhEECHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHhCCCCcEEEcCCCCCCHHHcccCHhhCCCCceehhhHHHHH
Confidence 566532210 0112355678889999999999876322110 0 00111111
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhh---hhhhcc-
Q 011766 363 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRIT---SLVYCM- 438 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~---~~~~~~- 438 (478)
... .....++|++++++++|.|||+++|++ +|+|++|++|||||+|.+..+..+.++..+ ...+..
T Consensus 335 ~~~--------~~~~~~~~~~~~~~~~t~~~a~~~g~~--~g~i~~G~~Ad~~~~d~~~~~~~~~~~~~~~~~~~~~~g~ 404 (428)
T 3mpg_A 335 YTN--------LVKKGIITLEQLIQFLTEKPADTFGLE--AGRLKEGRTADITIIDLEQEEEIDPTTFLSKGKNTPFAGW 404 (428)
T ss_dssp HHH--------TTTTTSSCHHHHHHTTTHHHHHHHTCS--CSCCCTTSBCCEEEEESSCCEECCGGGCSSSCCCCSCTTC
T ss_pred HHH--------HHHcCCCCHHHHHHHHhHHHHHHhCCC--CccccCCCcCCEEEEcCCCCEEEchhhccccCCCCCcCCC
Confidence 111 112346999999999999999999994 799999999999999987433222111111 111111
Q ss_pred -CCCCeeEEEEccEEEEECCeee
Q 011766 439 -RTENVVSVMCNGQWVMKNKKIL 460 (478)
Q Consensus 439 -~~~~v~~v~v~G~~v~~~g~~~ 460 (478)
...+|.+||++|++||++|+++
T Consensus 405 ~~~g~v~~t~v~G~~v~~~g~~~ 427 (428)
T 3mpg_A 405 KCQGWPVMTIVGGKIAWQKESAL 427 (428)
T ss_dssp EECCEEEEEEETTEEEEECSCC-
T ss_pred EEeeEEEEEEECCEEEEeCCccc
Confidence 1346999999999999999875
No 48
>4ac7_C Urease subunit alpha; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 4ubp_C* 1ie7_C*
Probab=100.00 E-value=5.9e-33 Score=273.63 Aligned_cols=338 Identities=18% Similarity=0.182 Sum_probs=201.8
Q ss_pred CccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhh-------hhccCCCeEEeCCCCEEeecccccccc
Q 011766 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-------QFSQMADQIIDLQSQILLPGFVNTHVH 88 (478)
Q Consensus 16 ~~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~-------~~~~~~~~viD~~G~~v~PGfID~H~H 88 (478)
...++++|+|++|+++. . +..++|+|+||||++|++...... .....++++||++|++|+|||||+|+|
T Consensus 64 ~~~~dllI~n~~vvd~~---g-~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH 139 (570)
T 4ac7_C 64 ENVLDLLLTNALILDYT---G-IYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVH 139 (570)
T ss_dssp TTBCSEEEEEEEEEETT---E-EEEEEEEEETTEEEEEECCBCTTTCSSCCTTCBCCTTCEEEECTTCEEEECEEEEEEE
T ss_pred cCCCCEEEECeEEECCC---C-cEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEecccc
Confidence 34689999999999742 2 467899999999999998532100 001235689999999999999999999
Q ss_pred cchhhhccccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC------------HHH---H
Q 011766 89 TSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH------------VSE---M 153 (478)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~------------~~~---~ 153 (478)
+... .. ...++++||||+++.+... ... +
T Consensus 140 ~~~P----------------------------g~--------~~aAl~gGvTTvv~gg~~p~~~~n~~p~~~~~~~l~~~ 183 (570)
T 4ac7_C 140 FINP----------------------------DQ--------VDVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKM 183 (570)
T ss_dssp CCCT----------------------------TH--------HHHHHHTTEEEEEEECSSSCHHHHHSSCCCHHHHHHHH
T ss_pred cCCc----------------------------ch--------HHHHHhcCCeEEEecCcCcccccCCcCcCCcHHHHHHH
Confidence 8210 00 1357999999999643210 111 1
Q ss_pred HHHHHHhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCC
Q 011766 154 AKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNAT 233 (478)
Q Consensus 154 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (478)
.+..+...+...... .+ ...... +..++.+ .+...++. +..+..+
T Consensus 184 l~aa~~~~v~~~~~g----~~-----------~~~~l~------------el~el~~----aGa~gfK~----~~~~~~~ 228 (570)
T 4ac7_C 184 LKSTEGLPINVGILG----KG-----------HGSSIA------------PIMEQID----AGAAGLKI----HEDWGAT 228 (570)
T ss_dssp HHHHTTCSSEEEEEE----EC-----------CCSSHH------------HHHHHHH----HTCCEEEE----EGGGCCC
T ss_pred HHHhhhCCeeEEEEe----cc-----------CCcCHH------------HHHHHHH----cCCCeEee----ccCCCCC
Confidence 222222222221110 00 000011 3333332 22223332 2334568
Q ss_pred HHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhC-CCCCCeeeeeeccCC-hhHHHHHHhcCCe
Q 011766 234 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIE-FLQNNLLSAHTVWVN-HTEIGLLSRAGVK 311 (478)
Q Consensus 234 ~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~i~h~~~~~-~~~~~~~~~~~~~ 311 (478)
++.+.++++.+++.++++.+|+....... . ....+.... .......+.|+.... ++.++++.+.++.
T Consensus 229 ~~~L~~aL~~A~~~g~~V~iHae~l~e~g-~----------Vedalea~~Gr~ih~~HiEgag~~hapd~i~~~~~~~vl 297 (570)
T 4ac7_C 229 PASIDRSLTVADEADVQVAIHSDTLNEAG-F----------LEDTLRAINGRVIHSFHVEGAGGGHAPDIMAMAGHPNVL 297 (570)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCTTCSSC-C----------HHHHHHHHTTCCEEETTTTSTTSSSTTTGGGGGGSTTEE
T ss_pred HHHHHHHHHHHHHcCCEEEEEcCCcchhh-H----------HHHHHHHhCCCcceeEeeeccccccChHHHHHhccCCcc
Confidence 89999999999999999999998532211 0 111112111 000111122222222 4555555555554
Q ss_pred EEE-Cccc---------------------------------hhhccCCCcHHHHHHCCCcEEEcCCCCCCCCCcCH-HHH
Q 011766 312 VSH-CPAS---------------------------------AMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSI-VDE 356 (478)
Q Consensus 312 ~~~-~p~~---------------------------------~~~~~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~-~~~ 356 (478)
.+. +|.. ..+.....+++.|++.|+.+++|||++...+.... ...
T Consensus 298 ps~t~Pt~p~~~n~~~e~ld~l~v~hhl~~~i~~D~~~a~~Rir~~~i~a~~~L~d~G~~v~~gSD~p~~~~~ge~~~~~ 377 (570)
T 4ac7_C 298 PSSTNPTRPFTVNTIDEHLDMLMVCHHLKQNIPEDVAFADSRIRPETIAAEDILHDLGIISMMSTDALAMGRAGEMVLRT 377 (570)
T ss_dssp EBCCGGGSSCBTTHHHHHHHHHHHHTTCCTTCHHHHHHHHHHSCHHHHHHHHHHHHTTSSCBCCCCBTTSSCTTCHHHHH
T ss_pred ccccCCCCCcccchhHHhhhheeeecccCccccchhHHHHhhhhhhhcccccchhhcCCEEEEECcccccCCcCcccCcH
Confidence 332 2220 00112355788999999999999999765332222 222
Q ss_pred HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhh
Q 011766 357 MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVY 436 (478)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~ 436 (478)
+..+......+.........++++++++||+++|.|||+++|+++++|+|++||.||||+||.+++.
T Consensus 378 ~~~a~~~~~~rg~l~~~~~~~~~~~~~eal~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~d~~~------------- 444 (570)
T 4ac7_C 378 WQTADKMKKQRGPLAEEKNGSDNFRLKRYVSKYTINPAIAQGIAHEVGSIEEGKFADLVLWEPKFFG------------- 444 (570)
T ss_dssp HHHHHHHHHHHCSCTTCCTTCCHHHHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEECGGGTT-------------
T ss_pred HHHHHHHHHhcCCCCCccccccCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCccCEEEECchhcc-------------
Confidence 2222221111111111111356799999999999999999999988999999999999999987431
Q ss_pred ccCCCCeeEEEEccEEEEEC
Q 011766 437 CMRTENVVSVMCNGQWVMKN 456 (478)
Q Consensus 437 ~~~~~~v~~v~v~G~~v~~~ 456 (478)
.++..||++|++||+.
T Consensus 445 ----~~v~~t~~~G~~v~~~ 460 (570)
T 4ac7_C 445 ----VKADRVIKGGIIAYAQ 460 (570)
T ss_dssp ----TSCSEEEETTEEEEEE
T ss_pred ----CceEEEEECCEEEEcc
Confidence 4789999999999974
No 49
>4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C*
Probab=100.00 E-value=4.7e-33 Score=274.31 Aligned_cols=338 Identities=18% Similarity=0.182 Sum_probs=202.0
Q ss_pred CccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhh-------hhccCCCeEEeCCCCEEeecccccccc
Q 011766 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-------QFSQMADQIIDLQSQILLPGFVNTHVH 88 (478)
Q Consensus 16 ~~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~-------~~~~~~~~viD~~G~~v~PGfID~H~H 88 (478)
...++++|+|++|+++. . +..++|+|+||||++|++...... .....++++||++|++|+|||||+|+|
T Consensus 64 ~~~~dllI~n~~vvd~~---g-~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH 139 (570)
T 4ubp_C 64 ENVLDLLLTNALILDYT---G-IYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVH 139 (570)
T ss_dssp TTBCSEEEEEEEEEETT---E-EEEEEEEEETTEEEEEECCBCTTTCTTCCTTCBCCTTCEEEECTTCEEEECEEEEEEE
T ss_pred cCCCCEEEECeEEECCC---C-cEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEEcccC
Confidence 34689999999999742 2 467899999999999998532100 001235689999999999999999999
Q ss_pred cchhhhccccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC------------HHH---H
Q 011766 89 TSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH------------VSE---M 153 (478)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~------------~~~---~ 153 (478)
+... .. ...++++||||+++.+... ... +
T Consensus 140 ~~~P----------------------------g~--------~~aAl~gGvTTvv~gg~~p~~~~n~~p~~~~~~~l~~~ 183 (570)
T 4ubp_C 140 FINP----------------------------DQ--------VDVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKM 183 (570)
T ss_dssp CCCT----------------------------TH--------HHHHHHTTEEEEEEECCSSCHHHHHSSCCCHHHHHHHH
T ss_pred CCCc----------------------------ch--------HHHHHhcCCeEEEecCccccccCCCcCCCCcHHHHHHH
Confidence 8210 00 1357999999999643210 111 1
Q ss_pred HHHHHHhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCC
Q 011766 154 AKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNAT 233 (478)
Q Consensus 154 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (478)
.+..+...+...... .+ ...... +..++.+ .+...++. +..+..+
T Consensus 184 l~aa~~~~v~~~~~g----~~-----------~~~~l~------------el~el~~----aGa~gfK~----~~~~~~~ 228 (570)
T 4ubp_C 184 LKSTEGLPINVGILG----KG-----------HGSSIA------------PIMEQID----AGAAGLKI----HEDWGAT 228 (570)
T ss_dssp HHHHTTCSSEEEEEE----EC-----------CCSSHH------------HHHHHHH----HTCCEEEE----EGGGCCC
T ss_pred HHHhhhCCeeEEEEe----cc-----------CCcCHH------------HHHHHHH----cCCCeEee----ccCCCCC
Confidence 222222222221110 00 000011 3333332 22223332 2334568
Q ss_pred HHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhC-CCCCCeeeeeeccCC-hhHHHHHHhcCCe
Q 011766 234 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIE-FLQNNLLSAHTVWVN-HTEIGLLSRAGVK 311 (478)
Q Consensus 234 ~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~i~h~~~~~-~~~~~~~~~~~~~ 311 (478)
++.+.++++.+++.++++.+|+....... . ....+.... .......+.|+.... ++.++++.+.++.
T Consensus 229 ~~~L~~aL~~A~~~g~~V~iHae~l~e~g-~----------Vedalea~~Gr~ih~~HiEgag~~hapd~i~~~~~~~vl 297 (570)
T 4ubp_C 229 PASIDRSLTVADEADVQVAIHSDTLNEAG-F----------LEDTLRAINGRVIHSFHVEGAGGGHAPDIMAMAGHPNVL 297 (570)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCTTCSSC-C----------HHHHHHHHTTCCEEETTTTSTTSSSTTTGGGGGGSTTEE
T ss_pred HHHHHHHHHHHHHcCCEEEEEcCCcchhh-H----------HHHHHHHhCCCceeEEEecccccccChHHHHHhccCCcc
Confidence 89999999999999999999998532211 0 111112111 000111122222222 5555555555554
Q ss_pred EEE-Cccc---------------------------------hhhccCCCcHHHHHHCCCcEEEcCCCCCCCCCcCH-HHH
Q 011766 312 VSH-CPAS---------------------------------AMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSI-VDE 356 (478)
Q Consensus 312 ~~~-~p~~---------------------------------~~~~~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~-~~~ 356 (478)
.+. +|.. ..+.....+++.|++.|+.+++|||++...+.... ...
T Consensus 298 ps~t~Pt~p~~~n~~~e~ld~l~v~hhl~~~i~~D~~~a~~Rir~~~i~a~~~L~d~G~~v~~gSD~p~~~~~ge~~~~~ 377 (570)
T 4ubp_C 298 PSSTNPTRPFTVNTIDEHLDMLMVCHHLKQNIPEDVAFADSRIRPETIAAEDILHDLGIISMMSTDALAMGRAGEMVLRT 377 (570)
T ss_dssp EBCCSTTSSCBTTHHHHHHHHHHHHHTCCTTSHHHHHHHHHHSCHHHHHHHHHHHHTTSSCBCCCCBTTSSCTTCHHHHH
T ss_pred ccccCCCCCcccchhHHhhhheeeecccCccccchhHHHHhhhhhhccccccchhhcCCEEEEECcccccCCcCcccCcH
Confidence 332 2220 00112355788999999999999999765332222 222
Q ss_pred HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhh
Q 011766 357 MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVY 436 (478)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~ 436 (478)
+..+......+.........++++++++||+++|.|||+++|+++++|+|++||.||||+||.+++.
T Consensus 378 ~~~a~~~~~~rg~l~~~~~~~~~~~~~eal~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~d~~~------------- 444 (570)
T 4ubp_C 378 WQTADKMKKQRGPLAEEKNGSDNFRLKRYVSKYTINPAIAQGIAHEVGSIEEGKFADLVLWEPKFFG------------- 444 (570)
T ss_dssp HHHHHHHHHHHCSCTTCCSSCCHHHHHHHHHTTTHHHHHHHTCTTTSSSCCTTSBCCEEEECGGGTT-------------
T ss_pred HHHHHHHHHhcCCCCCccccccCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCccCEEEECccccc-------------
Confidence 2222221111111111111356799999999999999999999988999999999999999987431
Q ss_pred ccCCCCeeEEEEccEEEEEC
Q 011766 437 CMRTENVVSVMCNGQWVMKN 456 (478)
Q Consensus 437 ~~~~~~v~~v~v~G~~v~~~ 456 (478)
.++..||++|++||+.
T Consensus 445 ----~~v~~t~~~G~~v~~~ 460 (570)
T 4ubp_C 445 ----VKADRVIKGGIIAYAQ 460 (570)
T ss_dssp ----TSCSEEEETTEEEEEE
T ss_pred ----CCeeEEEECCEEEEec
Confidence 4789999999999974
No 50
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.9e-33 Score=277.83 Aligned_cols=377 Identities=13% Similarity=0.086 Sum_probs=216.8
Q ss_pred ceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcccc
Q 011766 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (478)
Q Consensus 19 ~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~ 98 (478)
|+++|+|++|+++++ . .+++|+|+||+|++|++..+ ++++||++|++|+|||||+|+|+......
T Consensus 1 m~~~i~~~~v~~~~~---~-~~~~v~I~~G~I~~i~~~~~--------~~~viD~~g~~v~PG~ID~H~H~~~~~~~--- 65 (490)
T 3dc8_A 1 MSTVIKGGTIVTADL---T-YKADVKVEGGRIVEIGPNLS--------GAETLDATGCYVMPGGIDPHTHLEMPFMG--- 65 (490)
T ss_dssp -CEEEESCEEECSSC---E-EECEEEEETTEEEEEESSCC--------CSEEEECTTCEEEECEEEEEECTTCEETT---
T ss_pred CcEEEEccEEECCCC---c-eeeeEEEECCEEEEeccCCC--------CCeEEECCCCEEecCEEeeccccCCCCCC---
Confidence 478999999997643 2 56799999999999997532 46899999999999999999999542210
Q ss_pred CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC----HHHHHHHHHHhCCeEEEecccccCC
Q 011766 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH----VSEMAKAVELLGLRACLVQSTMDCG 174 (478)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~ 174 (478)
....++.. ...+.++++|||+++++.... .....+.......+..+.......
T Consensus 66 ------------------~~~~e~~~----~~~~aa~~~GvTtv~~~~~~~p~~~~~~~~~~~~~~a~~~~~d~~~~~~- 122 (490)
T 3dc8_A 66 ------------------TYSSDDFE----SGTRAALAGGTTMVVDFALPSPGQSLLEALTMWDNKSTRANCDYSFHMA- 122 (490)
T ss_dssp ------------------EECSCCHH----HHHHHHHHTTEEEEEEEECCC-CCCHHHHHHHHHHHTTTCSSEEEEEEE-
T ss_pred ------------------CCCHHHHH----HHHHHHHHcCEEeecccCCCCCCcCHHHHHHHHHHHhhcccceeeeEEE-
Confidence 01111111 233457899999999864322 222222222221111111000000
Q ss_pred CCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhc-CCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeE
Q 011766 175 EGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHH-HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHM 253 (478)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~ 253 (478)
... ... +..+.+.++. ..+...++.+..+.....++++.+.++++.++++|.++++
T Consensus 123 --~~~-----~~~----------------~~l~el~~l~~~~G~~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~ 179 (490)
T 3dc8_A 123 --ITW-----WGE----------------QVFNEMETIVKDKGINTFKHFMAYKGALMVDDDEMFSSFQRCAALGALPLV 179 (490)
T ss_dssp --CCS-----CSH----------------HHHHHHHHHHHHSCCCEEEEESCSTTTTBCCHHHHHHHHHHHHHHTCEEEE
T ss_pred --Eec-----CcH----------------HHHHHHHHHHHhCCCCEEEEEecCCCCccCCHHHHHHHHHHHHhcCCEEEE
Confidence 000 000 1122233332 3444556665566666677899999999999999999999
Q ss_pred eccCChhhhHHHh-h--hcCC--------CCc------hH-HHHhhhCCCCCCeeeeeeccCC-hhHHHHHHhcCCe--E
Q 011766 254 HVAEIPYENQVVM-D--TRKV--------DHG------TV-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAGVK--V 312 (478)
Q Consensus 254 H~~~~~~~~~~~~-~--~~~~--------~~~------~~-~~l~~~~~~~~~~~i~h~~~~~-~~~~~~~~~~~~~--~ 312 (478)
|+.+.. ...... . ..+. ... .+ ..+......+.+..+.|.+.-. -+.++.+++.|.. .
T Consensus 180 HaE~~~-~i~~~~~~~~~~g~~~~~~~~~~rP~~~E~~av~r~i~la~~~g~~lhi~HvSt~~~~~li~~ak~~G~~Vt~ 258 (490)
T 3dc8_A 180 HAENGD-VVAQLQAKLLAEGNSGPEAHAYSRPAEVEGEAANRAIMIADMAGCPVYIVHTSCEQAHEAIRRARAKGMRVFG 258 (490)
T ss_dssp ECSCHH-HHHHHHHHHHHTTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEESSCCSHHHHHHHHHHHHTTCCEEE
T ss_pred ecCChH-HHHHHHHHHHhcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHHHCCCeEEE
Confidence 965432 211100 0 0000 000 00 1111122223444455544211 1345555666655 4
Q ss_pred EECccchhhc---------------cCCC---------cHHHHHHCCCcEEEcCCCCCCCCCc------CHHH-------
Q 011766 313 SHCPASAMRM---------------LGFA---------PIKEMLHADICVSLGTDGAPSNNRM------SIVD------- 355 (478)
Q Consensus 313 ~~~p~~~~~~---------------~~~~---------~~~~~~~~gv~v~~gsD~~~~~~~~------~~~~------- 355 (478)
.+||...... .-.+ .+.+.+..|...+++||+.++.... ++..
T Consensus 259 e~~ph~l~l~~~~~~~~~~~~~~~~~~~Pplr~~~d~~aL~~~l~~G~id~i~sDh~p~~~~~K~~g~~~f~~~~~G~~g 338 (490)
T 3dc8_A 259 EPLIQHLTLDETEYFDKDWDHAARRVMSPPFRNKLHQDSLWAGLASGSLQVVATDHCAFTTEQKRFGVGDFTRIPNGTGG 338 (490)
T ss_dssp CCBHHHHHCCGGGGGCSCHHHHHHTCCSSCCCCGGGHHHHHHHHHHTSSCCCBCCBCCCCHHHHGGGTTCGGGSCCCBCC
T ss_pred EEchHHheeCHHHhcCcCcccCCceEECCCCCChHHHHHHHHHHhcCCceEEECCCCCCCHHHhhccCCChhhCCCChHH
Confidence 5666432110 0112 2446678899999999998763100 0000
Q ss_pred -HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcC------
Q 011766 356 -EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVH------ 428 (478)
Q Consensus 356 -~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~------ 428 (478)
+..+..+...+ ....++|++++++++|.|||+++|+++++|+|++|++|||||||.+..+..+.+
T Consensus 339 le~~l~~~~~~~--------v~~~~l~~~~~~~~~t~~~A~~~gl~~~~G~l~~G~~ADlvv~d~~~~~~i~~~~~~s~~ 410 (490)
T 3dc8_A 339 LEDRMPMLWTYG--------VATGRITMNEFVAVTSTNIAKILNIYPKKGAILVGADADLVVWDPKRSKTISAKTQQSAI 410 (490)
T ss_dssp TTTHHHHHHHHH--------TTTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSBCCEEEEEEEEEEECCTTTCSSSS
T ss_pred HHHHHHHHHHHH--------HHcCCCCHHHHHHHHHHHHHHHhCCCCCCCccCCCCcCCEEEEecCcceEechhhccccC
Confidence 00011111100 123469999999999999999999987889999999999999998732211111
Q ss_pred --ChhhhhhhccCCCCeeEEEEccEEEEECCeeeccc-HHHHH
Q 011766 429 --DRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLM-RGRLF 468 (478)
Q Consensus 429 --d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~-~~~~~ 468 (478)
+|+.... -...|.+||++|++||++|+++... .|+++
T Consensus 411 ~~sp~~g~~---~~g~v~~t~~~G~~v~~~g~~~~~~~~G~~~ 450 (490)
T 3dc8_A 411 DYNVFEGKT---VTGLPRFTLTRGVVSIEEGTVKTQEGHGEFV 450 (490)
T ss_dssp SCCTTTTCE---EEEEEEEEEETTEEEEETTEECCCTTCCCBC
T ss_pred CCCcccCcE---EeeEEEEEEECCEEEEECCEEcccCCCceec
Confidence 2322211 1257999999999999999998654 45544
No 51
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=100.00 E-value=1.4e-33 Score=279.21 Aligned_cols=366 Identities=16% Similarity=0.170 Sum_probs=212.8
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcC--ChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhh
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQ--SADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA 94 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~--~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~ 94 (478)
.+++++|+|++|+++++ . .+++|+|+||+|++|++ ..+ ..+.++||++|++|+|||||+|+|+.....
T Consensus 4 ~~~~~~i~~~~v~~~~~---~-~~~~v~i~~g~I~~i~~~~~~~------~~~~~~id~~g~~v~PG~ID~H~H~~~~~~ 73 (448)
T 3hm7_A 4 KRFDLIIRSSTVVTETT---T-YRADVAIRNGIVSAITEPGSIS------SDDGPAIDGTGLHLFPGMVDVHVHFNEPGR 73 (448)
T ss_dssp -CCSEEEEEEEEECSSC---E-EEEEEEEETTEEEEEESTTCSC------TTSSCEEECTTCEEEECEEEEEECCCTTTS
T ss_pred CcccEEEEeeEEECCCC---c-eEeEEEEECCEEEEeeCccCCC------CCCCeEEECCCCEEecCEEEeeeccCCCCC
Confidence 35789999999997543 2 67899999999999997 321 135689999999999999999999853210
Q ss_pred ccccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCC-cc-----CHHHHHH---HHHHhC-CeE
Q 011766 95 KGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQ-----HVSEMAK---AVELLG-LRA 164 (478)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~-~~-----~~~~~~~---~~~~~g-~~~ 164 (478)
...+ ......+.++++|||++++++ .. ....... .....+ +..
T Consensus 74 ------------------------~~~~---~~~~~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (448)
T 3hm7_A 74 ------------------------TEWE---GFASGSKSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDY 126 (448)
T ss_dssp ------------------------GGGC---CSHHHHHHHHTTTEEEEEECSSSSSSCSCSHHHHHHHHTHHHHHCSSEE
T ss_pred ------------------------CcHh---HHHHHHHHHHhCCEEEEEeCCCCCCCCCChHHHHHHHHHHhccCCeeEE
Confidence 0000 011223457899999999976 32 1222221 222222 222
Q ss_pred EEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEecccc---ccCCHHHHHHHH
Q 011766 165 CLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQI---MNATDRLLLETR 241 (478)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~ 241 (478)
..... . . ..... +..++.+ .+...++.+..+... ...+.+.+.+.+
T Consensus 127 ~~~~~-~------~--------~~~~~------------~l~~l~~----~g~~~~~~~l~~~~~~~~~~~~~~~l~~~l 175 (448)
T 3hm7_A 127 RFWGG-L------V--------PGNID------------HLQDLHD----GGVIGFKAFMSECGTDDFQFSHDETLLKGM 175 (448)
T ss_dssp EEEEE-C------C--------TTCGG------------GHHHHHH----TTCSEEEEESSSCSSSSSCCCCHHHHHHHH
T ss_pred EEEEE-e------c--------ccCHH------------HHHHHHH----cCCCEEEEeeccccCCccCcCCHHHHHHHH
Confidence 11110 0 0 01111 4444443 233334433333221 345788999999
Q ss_pred HHHHHcCCceeEeccCChhhhHHHhhh--cCCCC--------------c-hHHHHhhhCCCCCCeeeeeeccCC-hhHHH
Q 011766 242 DMAREFKTGIHMHVAEIPYENQVVMDT--RKVDH--------------G-TVTFLDKIEFLQNNLLSAHTVWVN-HTEIG 303 (478)
Q Consensus 242 ~~a~~~~~~v~~H~~~~~~~~~~~~~~--~~~~~--------------~-~~~~l~~~~~~~~~~~i~h~~~~~-~~~~~ 303 (478)
+.+++.|+++.+|+.+........... .+... . ....+......+.+..+.|...-. -+.++
T Consensus 176 ~~a~~~g~~v~vH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~~i~H~s~~~~~~~i~ 255 (448)
T 3hm7_A 176 KKIAALGSILAVHAESNEMVNALTTIAIEEQRLTVKDYSEARPIVSELEAVERILRFAQLTCCPIHICHVSSRKVLKRIK 255 (448)
T ss_dssp HHHHHHTCCEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEECCCCCHHHHHHHH
T ss_pred HHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCcChhhccccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHH
Confidence 999999999999997644321100000 00000 0 011122222223455555654211 23455
Q ss_pred HHHhcCC--eEEECccchhhc-----------c---------CCCcHHHHHHCCCcEEEcCCCCCCCCCcC----HHH--
Q 011766 304 LLSRAGV--KVSHCPASAMRM-----------L---------GFAPIKEMLHADICVSLGTDGAPSNNRMS----IVD-- 355 (478)
Q Consensus 304 ~~~~~~~--~~~~~p~~~~~~-----------~---------~~~~~~~~~~~gv~v~~gsD~~~~~~~~~----~~~-- 355 (478)
.+++.|. .+.+||...... . ...++.+++..|+.++++||+.+...... +..
T Consensus 256 ~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~g~~~~i~tD~~p~~~~~k~~~~~~~~~ 335 (448)
T 3hm7_A 256 QAKGEGVNVSVETCPHYLLFSLDEFAEIGYLAKCAPPLRERQEVEDLWDGLMAGEIDLISSDHSPSLPQMKTGKTIFEVW 335 (448)
T ss_dssp HHHHTTCCEEEEECHHHHHCCHHHHHHHCSTTCCSSCCCCHHHHHHHHHHHHHTCCCEECCCBCCCCGGGGCCSSTTTSC
T ss_pred HHHhcCCCEEEEechHHHccCHHHhcCCCCeEEEcCCCCCHHHHHHHHHHHhcCCccEEEeCCCCCCHHHcccCCHhhCC
Confidence 5566654 567777543210 0 12235567788999999999876532111 000
Q ss_pred ------HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCC
Q 011766 356 ------EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHD 429 (478)
Q Consensus 356 ------~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d 429 (478)
+.....+... .....++|++++++++|.|||+++|+++++|+|++|++|||||+|.+..+..+.++
T Consensus 336 ~G~~g~e~~l~~~~~~--------~~~~~~l~~~~~~~~~t~~~A~~~g~~~~~g~l~~G~~Ad~~~~d~~~~~~~~~~~ 407 (448)
T 3hm7_A 336 GGIAGCQNTLAVMLTE--------GYHKRKMPLTQIVQLLSTEPAKRFGLYPQKGTIQVGAEASFTLIDLNESYTLNASD 407 (448)
T ss_dssp CCBCCTTTHHHHHHHH--------TTTTTCCCHHHHHHHHTHHHHHHHTCTTTSSCCSTTSBCCEEEEEEEEEEECCGGG
T ss_pred CCCccHHHHHHHHHHH--------HHhcCCcCHHHHHHHHhHHHHHHcCCCCCCCcccCCCcCCEEEEeCCCCEEEChHh
Confidence 1112222211 11245799999999999999999999888999999999999999987333222222
Q ss_pred hhhhhhhcc-----CCCCeeEEEEccEEEEECCe
Q 011766 430 RITSLVYCM-----RTENVVSVMCNGQWVMKNKK 458 (478)
Q Consensus 430 ~~~~~~~~~-----~~~~v~~v~v~G~~v~~~g~ 458 (478)
..+...+.. -..+|.+||++|++||++++
T Consensus 408 ~~~~~~~sp~~g~~~~g~v~~t~~~G~~v~~~~~ 441 (448)
T 3hm7_A 408 LYYRHPISPYVGQRFRGKVKHTICQGKHVYQDHE 441 (448)
T ss_dssp CCSSSCCCTTTTCEEEEEEEEEEETTEEEEECC-
T ss_pred cccccCCCCCCCCEEEEEEEEEEECCEEEEECCC
Confidence 222211111 12579999999999999986
No 52
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=100.00 E-value=7e-33 Score=275.69 Aligned_cols=372 Identities=16% Similarity=0.135 Sum_probs=216.6
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~ 96 (478)
.+++++|+|++|+++++ ....+++|+|+||+|++|++... ..+.++||++|++|+|||||+|+|+....++.
T Consensus 5 ~~~~~~i~~~~v~~~~~--~~~~~~~v~i~~g~I~~i~~~~~------~~~~~~id~~g~~v~PG~iD~H~H~~~~~~~~ 76 (480)
T 3gip_A 5 EKLDFKITGGWIIDGTG--APRRRADLGVRDGRIAAIGELGA------HPARHAWDASGKIVAPGFIDVHGHDDLMFVEK 76 (480)
T ss_dssp CCEEEEEESSEECCSSS--CCCEECEEEEETTEEEEEECCTT------SCEEEEEECTTSEEEECEEESSCCCTTHHHHS
T ss_pred ccCCEEEECcEEECCCC--CeeeeeEEEEECCEEEEecCCCC------CCCCeEEECCCCEEccCEEeccccccccccCC
Confidence 45789999999997553 34567899999999999998532 13568999999999999999999985432221
Q ss_pred ccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecC---------Cc-----------------cCH
Q 011766 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA---------GG-----------------QHV 150 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~---------~~-----------------~~~ 150 (478)
.. ....+.+|+||+++. .. ...
T Consensus 77 -------------------~~-------------~~~~~~~G~Tt~~~g~cG~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 124 (480)
T 3gip_A 77 -------------------PD-------------LRWKTSQGITTVVVGNCGVSAAPAPLPGNTAAALALLGETPLFADV 124 (480)
T ss_dssp -------------------TT-------------CHHHHTTTEEEEEECCTTCCSCSCCCTTCCCGGGGGTCSSCCCSSH
T ss_pred -------------------hh-------------HHHHhcCCeeEEEecCCCcCCCCCCcccchhhhhhhhccCccccCH
Confidence 00 012488999999972 10 112
Q ss_pred HHHHHHHHHhCCeEEEec----ccc---cCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEE
Q 011766 151 SEMAKAVELLGLRACLVQ----STM---DCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIW 223 (478)
Q Consensus 151 ~~~~~~~~~~g~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (478)
....+.....+....+.. ... ..+. . ....+.+.+. +..+++++....+...++..
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~g~~~~r~~~~g~-~----~~~~~~~~l~------------~m~~l~~~~~~~Ga~g~~~~ 187 (480)
T 3gip_A 125 PAYFAALDAQRPMINVAALVGHANLRLAAMRD-P----QAAPTAAEQQ------------AMQDMLQAALEAGAVGFSTG 187 (480)
T ss_dssp HHHHHHHHHSCCSSEEEEEEEHHHHHHHHCSS-T----TSCCCHHHHH------------HHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHhCCCCceEEEccccHHHHHHhcCC-c----CCCCCHHHHH------------HHHHHHHHHHHCCCcEEeec
Confidence 333333333332221111 000 0000 0 0001111111 34444443334444444433
Q ss_pred EeccccccCCHHHHHHHHHHHHHcCCceeEeccCChhh-hHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCC----
Q 011766 224 FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE-NQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN---- 298 (478)
Q Consensus 224 ~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~---- 298 (478)
..+......+.+.+.++.+.++++|.++.+|+.+.... ... ..+.+......+.+..+.|.....
T Consensus 188 ~~y~p~~~~~~~el~~~~~~a~~~g~~v~~H~~~~~~~~~~a----------~~e~i~la~~~g~~v~i~H~s~~~~~~~ 257 (480)
T 3gip_A 188 LAYQPGAVAQAAELEGLARVAAERRRLHTSHIRNEADGVEAA----------VEEVLAIGRGTGCATVVSHHKCMMPQNW 257 (480)
T ss_dssp TTSTTGGGCCHHHHHHHHHHHHHTTCEEEEECSCSSTTHHHH----------HHHHHHHHHHHCCEEEETTCCCCSGGGT
T ss_pred CccCCcccCCHHHHHHHHHHHHHcCCEEEEEecCccccHHHH----------HHHHHHHHHHhCCCEEEEEEeccCccch
Confidence 32222223467778888899999999999999653221 111 112222222233445566665321
Q ss_pred ---hh---HHHHHHhcCC--eEEECccchhhc------------------------cC-----------CCcHH------
Q 011766 299 ---HT---EIGLLSRAGV--KVSHCPASAMRM------------------------LG-----------FAPIK------ 329 (478)
Q Consensus 299 ---~~---~~~~~~~~~~--~~~~~p~~~~~~------------------------~~-----------~~~~~------ 329 (478)
.+ .++.+++.|+ .+.++|...... .+ ..+..
T Consensus 258 ~~~~~~l~~i~~a~~~G~~Vt~e~~p~~~~~t~~~l~~~~~~~~~~~~~~~~~p~~~g~~~~~ia~~~~~~~~~a~~~~l 337 (480)
T 3gip_A 258 GRSRATLANIDRAREQGVEVALDIYPYPGSSTILIPERAETIDDIRITWSTPHPECSGEYLADIAARWGCDKTTAARRLA 337 (480)
T ss_dssp TTHHHHHHHHHHHHHTTCCEEEEECSCSCEEEECCGGGTTTSSCCEEEEESSCGGGTTCBHHHHHHHHTSCHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHcCCceEEEeeccccCcchhhhcCHHHHHHHhhccccCCCccCCCcHHHHHHHcCCCHHHHHHHhc
Confidence 33 4455566664 455666543210 00 11111
Q ss_pred --------------HHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHH
Q 011766 330 --------------EMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAK 395 (478)
Q Consensus 330 --------------~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~ 395 (478)
..+..+...++|||+.++.....+...-......... ....+.+|++++++++|.+||+
T Consensus 338 ~~g~i~~~~~~~~~~~~~~~~~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~-------v~~~~~~~~~~~~~~~t~~~a~ 410 (480)
T 3gip_A 338 PAGAIYFAMDEDEVKRIFQHPCCMVGSDGLPNDARPHPRLWGSFTRVLGRY-------VREARLMTLEQAVARMTALPAR 410 (480)
T ss_dssp SEEEEECCCCHHHHHHHHHSTTEEECCCCCTTCSSCCTHHHHHHHHHHHCC-------CCCTCSSCHHHHHHHHTHHHHH
T ss_pred cCCeEEEeCCHHHHHHHHcCCCeEEecCCcccCCCCChhhhhhHHHHHHHH-------hhhcCCCCHHHHHHHHHHHHHH
Confidence 1123345678899987653322222211122222111 1123469999999999999999
Q ss_pred HcCCCCCccccccCccccEEEEcCCCCCCC-CcCChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHHH
Q 011766 396 SVLWDNDIGSLEAGKKADMVVVDPFSWPMV-PVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQL 470 (478)
Q Consensus 396 ~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~-~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~~ 470 (478)
++|+++ +|+|++|++|||||||.+..... ...++ ......|.+||++|++||++|++++ .+|++++.
T Consensus 411 ~~g~~~-~G~l~~G~~AD~vv~d~~~~~~~~~~~~~------~~~~~~v~~v~v~G~~v~~~g~~~~-~~G~~lr~ 478 (480)
T 3gip_A 411 VFGFAE-RGVLQPGAWADVVVFDPDTVADRATWDEP------TLASVGIAGVLVNGAEVFPQPPADG-RPGQVLRA 478 (480)
T ss_dssp HHTCTT-CSSCSTTSBCCEEEECTTTCBCCCCSSST------TCCCBSEEEEEETTEEEESSCCSSS-CCCCBCCC
T ss_pred HcCCCC-CCccCCCCCCCEEEEcCccccCccccccc------cccCCCccEEEECCEEEEECCeEcC-CCCcCcCC
Confidence 999965 59999999999999999864321 11122 1123579999999999999999999 88888753
No 53
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A
Probab=100.00 E-value=4.6e-32 Score=271.58 Aligned_cols=119 Identities=23% Similarity=0.247 Sum_probs=84.2
Q ss_pred cEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEE
Q 011766 337 CVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVV 416 (478)
Q Consensus 337 ~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv 416 (478)
++++|||+.+.+....+............ .......+|++++++++|.|||++||+++ +|+|++|++|||||
T Consensus 373 ~~~iGTD~~~~~~~~~~~~~~~~~~~l~~-------~v~~~~~l~~~~~l~~~T~~~A~~lgl~~-~G~i~~G~~ADlv~ 444 (496)
T 1rk6_A 373 PTMIGSDGLPHDERPHPRLWGTFPRVLGH-------YSRDLGLFPLETAVWKMTGLTAAKFGLAE-RGQVQPGYYADLVV 444 (496)
T ss_dssp TEEECCCCCTTCSSCCTHHHHHHHHHHCC-------CCCCTCSSCHHHHHHTTTHHHHHHHTCTT-CSSCCTTSBCCEEE
T ss_pred CEEEecCCCCCCCCCCchhhccHHHHHHH-------HHhhcCCCCHHHHHHHHHHHHHHHhCCCC-CCCcCCCCcccEEE
Confidence 68999999765321122222222222211 01123459999999999999999999954 79999999999999
Q ss_pred EcCCCCCCCCc-CChhhhhhhccCCCCeeEEEEccEEEEECCeeecccHHHHHH
Q 011766 417 VDPFSWPMVPV-HDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLLMRGRLFQ 469 (478)
Q Consensus 417 ~d~~~~~~~~~-~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~~~~~~~~ 469 (478)
+|.+++...+. .++.. ...+|..||++|++|+++|++++.+.|++++
T Consensus 445 ~d~~~~~~~~~~~~~~~------~~~~v~~v~v~G~~v~~~g~~~~~~~g~~l~ 492 (496)
T 1rk6_A 445 FDPATVADSATFEHPTE------RAAGIHSVYVNGAAVWEDQSFTGQHAGRVLN 492 (496)
T ss_dssp ECTTTCBCCCCSSSTTC------CCBSEEEEEETTEEEEETTEECSCCCCCBCC
T ss_pred EcCcccccccccccccc------cCCCceEEEECCEEEEECCeeccCCCceEee
Confidence 99986432221 12221 2357999999999999999999998888775
No 54
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.3e-31 Score=261.02 Aligned_cols=360 Identities=15% Similarity=0.134 Sum_probs=211.5
Q ss_pred eEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCC
Q 011766 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (478)
Q Consensus 21 ~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~ 100 (478)
++|+|++|++ . ....+++|+|+||+|++|++..+. ..++++||++|++|+|||||+|+|+.....
T Consensus 2 ~~i~~~~v~~-~---~~~~~~~v~i~~g~I~~i~~~~~~-----~~~~~~id~~g~~v~PG~iD~H~H~~~~g~------ 66 (424)
T 3gri_A 2 KLIKNGKVLQ-N---GELQQADILIDGKVIKQIAPAIEP-----SNGVDIIDAKGHFVSPGFVDVHVHLREPGG------ 66 (424)
T ss_dssp EEEESCEEEE-T---TEEEECEEEEETTEEEEEESCCCC-----CSSCEEEECTTCEEEECEEEEEECCCTTTC------
T ss_pred EEEEeeEEEc-C---CCceeeeEEEECCEEEEecCCCCC-----CCCCeEEECCCCEEEeCeEEeeecCCCCCC------
Confidence 6899999997 2 356788999999999999986431 235689999999999999999999843210
Q ss_pred CCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC--------HHHHHHHHHHhCCeEEEeccccc
Q 011766 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------VSEMAKAVELLGLRACLVQSTMD 172 (478)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~~ 172 (478)
...++ .....+.++++|||++++++... .....+.....+...+.....+.
T Consensus 67 -----------------~~~~~----~~~~~~~~~~~G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (424)
T 3gri_A 67 -----------------EYKET----IETGTKAAARGGFTTVCPMPNTRPVPDSVEHFEALQKLIDDNAQVRVLPYASIT 125 (424)
T ss_dssp -----------------TTTCC----HHHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEECCCEESB
T ss_pred -----------------CCHHH----HHHHHHHHHhCCEEEEeECcCCCCCCChHHHHHHHHHHhccCCCceEEEEEEEe
Confidence 00111 11234457899999999976421 22334445555653332221111
Q ss_pred CCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCcee
Q 011766 173 CGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIH 252 (478)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~ 252 (478)
.+ ...+... +..++. ..+ ... +..+..+..+++.+.++++.++++|++++
T Consensus 126 ~~----------~~~~~l~------------~l~~l~----~~G--~~~--~~~~~~~~~~~~~l~~~~~~a~~~g~~v~ 175 (424)
T 3gri_A 126 TR----------QLGKELV------------DFPALV----KEG--AFA--FTDDGVGVQTASMMYEGMIEAAKVNKAIV 175 (424)
T ss_dssp GG----------GCSSSBC------------CHHHHH----TTT--CCC--EEECSSCCCSHHHHHHHHHHHHHHTCCEE
T ss_pred cC----------CCcchHH------------HHHHHH----hcC--cEE--EecCCcCcCCHHHHHHHHHHHHhcCCEEE
Confidence 10 0111122 333333 222 222 34456677889999999999999999999
Q ss_pred EeccCChhhhH-------HHhhh--cCCCCchHH------HHhhhCCCCCCeeeeeeccCC-hhHHHHHHhcCC--eEEE
Q 011766 253 MHVAEIPYENQ-------VVMDT--RKVDHGTVT------FLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAGV--KVSH 314 (478)
Q Consensus 253 ~H~~~~~~~~~-------~~~~~--~~~~~~~~~------~l~~~~~~~~~~~i~h~~~~~-~~~~~~~~~~~~--~~~~ 314 (478)
+|+.+...... ..... .+.. ...+ .+......+.+..+.|..... -+.++.+++.|+ .+.+
T Consensus 176 ~H~e~~~~~~~~~~~~g~~~~~~~~~~~p-~~~E~~~v~r~~~la~~~g~~~~i~H~s~~~~~~~i~~ak~~G~~v~~e~ 254 (424)
T 3gri_A 176 AHCEDNSLIYGGAMHEGKRSKELGIPGIP-NICESVQIARDVLLAEAAGCHYHVCHVSTKESVRVIRDAKRAGIHVTAEV 254 (424)
T ss_dssp ECCCCGGGCTTCCEESSHHHHHHTCCEEC-THHHHHHHHHHHHHHHHHTCCEEECSCCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred EeCCCHHHHhhhhhhcCccchhhCCCCCC-HHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHHHcCCCEEEEe
Confidence 99976542110 00000 0000 0001 111112223455566655311 134455555664 4677
Q ss_pred Cccchhhc-----------cCCC---------cHHHHHHCCCcEEEcCCCCCCCCC------------cCHHHHHHHHHH
Q 011766 315 CPASAMRM-----------LGFA---------PIKEMLHADICVSLGTDGAPSNNR------------MSIVDEMYLASL 362 (478)
Q Consensus 315 ~p~~~~~~-----------~~~~---------~~~~~~~~gv~v~~gsD~~~~~~~------------~~~~~~~~~~~~ 362 (478)
||...... .-.+ .+.+++..|+.++++||+.++... ..-.+ ......
T Consensus 255 ~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~~igtDhap~~~~~k~~~~~~~~~G~~g~e-~~~~~~ 333 (424)
T 3gri_A 255 TPHHLLLTEDDIPGNNAIYKMNPPLRSTEDREALLEGLLDGTIDCIATDHAPHARDEKAQPMEKAPFGIVGSE-TAFPLL 333 (424)
T ss_dssp CHHHHHCCGGGCCSSCGGGCCSSCCCCHHHHHHHHHHHHTTSSCEECCCBCCCCHHHHTSCTTTSCCCCCCTT-THHHHH
T ss_pred cHHHHhcCHHHHhCcCceEEEeCCCCCHHHHHHHHHHHhcCCceEEEcCCCCCCHHHccCCHhHCCCCCcccc-ccHHHH
Confidence 88643211 0112 344678889999999999765210 00000 011111
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhh-----hhhc
Q 011766 363 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITS-----LVYC 437 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~-----~~~~ 437 (478)
... ....+++|++++++++|.|||+++|+ ++|+|++|+.|||||||.+..+..+.++..+. +...
T Consensus 334 ~~~--------~~~~~~~~~~~~~~~~t~~~a~~~g~--~~g~l~~G~~Ad~~~~d~~~~~~~~~~~~~~~~~~sp~~g~ 403 (424)
T 3gri_A 334 YTH--------FVKNGDWTLQQLVDYLTIKPCETFNL--EYGTLKENGYADLTIIDLDSEQEIKGEDFLSKADNTPFIGY 403 (424)
T ss_dssp HHH--------HTTTSSCCHHHHHHHHTHHHHHHTTC--SCSCCCTTSBCCEEEEESSCCEECCGGGCSSSCCCCTTTTC
T ss_pred HHH--------HHHcCCCCHHHHHHHHhHHHHHHhCC--CCCcccCCCcCCEEEEcCCCCEEEchhhcccccCCCCcCCC
Confidence 110 01234699999999999999999999 57999999999999999984332222221111 0001
Q ss_pred cCCCCeeEEEEccEEEEECCe
Q 011766 438 MRTENVVSVMCNGQWVMKNKK 458 (478)
Q Consensus 438 ~~~~~v~~v~v~G~~v~~~g~ 458 (478)
....+|.+||++|++||++|+
T Consensus 404 ~~~g~v~~t~~~G~~v~~~g~ 424 (424)
T 3gri_A 404 KVYGNPILTMVEGEVKFEGDK 424 (424)
T ss_dssp EESCEEEEEEETTEEEEEC--
T ss_pred EEeeeEEEEEECCEEEEeCCC
Confidence 113579999999999999986
No 55
>2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=9.3e-34 Score=284.91 Aligned_cols=383 Identities=15% Similarity=0.164 Sum_probs=213.4
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~ 96 (478)
++++++|+|++|++++ . ..+++|+|+||+|++|++.... ..++++||++|++|+|||||+|+|+.....
T Consensus 6 ~~~~~lI~n~~vv~~~---~-~~~~~V~I~dG~I~~Ig~~~~~-----~~~~~vIDa~G~~v~PGlID~H~H~~~~~~-- 74 (521)
T 2ftw_A 6 QTGTILIKNGTVVNDD---R-YFKSDVLVENGIIKEISKNIEP-----KEGIKVVDATDKLLLPGGIDTHTHFQLPFM-- 74 (521)
T ss_dssp -CCCEEEESCEEECSS---C-EEECEEEEETTEEEEEESCCCC-----CSSCCEEECTTCEEEECEEEEEECTTCEET--
T ss_pred ccCCEEEECcEEECCC---C-ceeeeEEEECCEEEEecCCCCC-----CCCCeEEECCCCEEecCEEeeecccCcCCC--
Confidence 4578999999999753 2 3568999999999999975321 124589999999999999999999843210
Q ss_pred ccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc----CHHHHHHHHHHhC-CeEEEecccc
Q 011766 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLG-LRACLVQSTM 171 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~----~~~~~~~~~~~~g-~~~~~~~~~~ 171 (478)
...+.++.+ ...+.++++|||++++++.. ......+...... ..........
T Consensus 75 -------------------~~~~~e~~~----~~~~~a~~~G~Ttv~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~g~h 131 (521)
T 2ftw_A 75 -------------------GTVSVDDFD----IGTQAAVAGGTTFIIDFVIPTRGQSLLEAYDQWKKWADEKVNCDYSLH 131 (521)
T ss_dssp -------------------TEECSSCHH----HHHHHHHHTTEEEEEEEECCCTTCCHHHHHHHHHHHHHTTCSSEEEEE
T ss_pred -------------------CccCHHHHH----HHHHHHHhCCcceecCcCCCCCCcCHHHHHHHHHHHhhcCceeeEeeE
Confidence 001112222 23355789999999986422 2222222111110 0000000000
Q ss_pred cCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCce
Q 011766 172 DCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGI 251 (478)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v 251 (478)
... +.+ ...... +..+++++ .+...++.+..++..+.++.+.+.++++.|+++|.++
T Consensus 132 ~~~----~~~----~~~~~~------------~l~~l~~~---~G~~~~k~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v 188 (521)
T 2ftw_A 132 VAI----TWW----SEQVSR------------EMEILVKE---RGVNSFKCFMAYKNSFMVTDQEMYHIFKRCKELGAIA 188 (521)
T ss_dssp EEC----CSC----CHHHHH------------HHHHHHHH---SCCCEEEEESSCTTTTBCCHHHHHHHHHHHHHHTCEE
T ss_pred Eee----cCC----ChhHHH------------HHHHHHHh---CCCCEEEEEeccCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 000 000 000001 23333322 2445566666556666789999999999999999999
Q ss_pred eEeccCChhhhHHH--hhhcCCCC---------chHHH------HhhhCCCCCCeeeeeecc-CChhHHHHHHhcCCeEE
Q 011766 252 HMHVAEIPYENQVV--MDTRKVDH---------GTVTF------LDKIEFLQNNLLSAHTVW-VNHTEIGLLSRAGVKVS 313 (478)
Q Consensus 252 ~~H~~~~~~~~~~~--~~~~~~~~---------~~~~~------l~~~~~~~~~~~i~h~~~-~~~~~~~~~~~~~~~~~ 313 (478)
++|+.+........ +...+... ...+. +........+..+.|... ...+.++++++.|+.+.
T Consensus 189 ~vH~e~~~~~~~~~~~l~~~G~~~~~~h~~~~~~~~e~~a~~~~~~la~~~~~p~hi~h~ss~~~~~~i~~~r~~G~~v~ 268 (521)
T 2ftw_A 189 QVHAENGDMVFEGQKKMLEMGITGPEGHELSRPEALEAEATNRAIVIADSVCTPVYIVHVQSIGAADVICKHRKEGVRVY 268 (521)
T ss_dssp EEECSCHHHHHHHHHHHHHTTCCSTHHHHHHSCTHHHHHHHHHHHHHHHHHTCCEEECSCCCHHHHHHHHHHHHTTCCEE
T ss_pred EEEcCCHHHHHHHHHHHHHcCCCChhhccccCcHHHHHHHHHHHHHHHHHhCCCEEEEecCcHHHHHHHHHHHHcCCeEE
Confidence 99996432111111 11111110 00111 111111223333444332 11234566777887643
Q ss_pred ECccchhhc------------------cCCCc----------HHHHHHCCCcEEEcCCCCCCCCCc------CHH-----
Q 011766 314 HCPASAMRM------------------LGFAP----------IKEMLHADICVSLGTDGAPSNNRM------SIV----- 354 (478)
Q Consensus 314 ~~p~~~~~~------------------~~~~~----------~~~~~~~gv~v~~gsD~~~~~~~~------~~~----- 354 (478)
++.....+ ...+| +.+++..|...+++||+.+..... ++.
T Consensus 269 -~e~~~~~L~~d~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~g~~~~~gsD~~~~~~~~k~~~~~~~~~~p~G 347 (521)
T 2ftw_A 269 -GEPIAAGLGVDGSHMWNHDWRHAAAFVMGPPIRPDPRTKGVLMDYLARGDLDCVGTDNCTFCADQKAMGKDDFTKIPNG 347 (521)
T ss_dssp -ECCBHHHHHCCGGGGGCSSHHHHHTTCCSSCCCCCTTHHHHHHHHHHHTSSCCCBCCBCCCCHHHHGGGTTCGGGSCCC
T ss_pred -EEEcchhhccCHHHhcCCCcccCcceEEcCCCCCChhhHHHHHHHhcCCCEEEEEeCCCCCCHHHhhcccCChhhCCCC
Confidence 22211100 11122 233788999999999986542000 000
Q ss_pred ---HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCc----
Q 011766 355 ---DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPV---- 427 (478)
Q Consensus 355 ---~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~---- 427 (478)
.+.++...... .....++|++++++++|.|||+++|+++++|+|++|++|||||||.+.......
T Consensus 348 ~~G~e~~l~~~~~~--------~v~~~~l~~~~~~~~~t~~~A~~~gl~~~~G~i~~G~~ADlvv~d~~~~~~i~~~~~~ 419 (521)
T 2ftw_A 348 VNGVEDRMSIVWEN--------GVNTGKLTWCQFVRATSSERARIFNIYPRKGRIDVGCDGDIVIWDPNQSKTISKDTHH 419 (521)
T ss_dssp BCCTTTHHHHHHHH--------HTTTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSBCCEEEEEEEEEEECCTTTCC
T ss_pred CccHHHHHHHHHHH--------HHhcCCCCHHHHHHHhChhHHHHhCCCCCCCCcCCCCcCCEEEEeCCCCEEEChHHcc
Confidence 00000000000 012346999999999999999999998889999999999999999884321111
Q ss_pred ----CChhhhhhhccCCCCeeEEEEccEEEEECCeeec-ccHHHHH
Q 011766 428 ----HDRITSLVYCMRTENVVSVMCNGQWVMKNKKILL-LMRGRLF 468 (478)
Q Consensus 428 ----~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~-~~~~~~~ 468 (478)
.+|+.... ....|..||++|++||++|+++. ...|+++
T Consensus 420 ~~~~~~p~~g~~---~~g~v~~v~v~G~~v~~~g~~~~~~~~G~~~ 462 (521)
T 2ftw_A 420 HAVDFNIFEGIK---VTGIAVTTIVAGNIVWSDNKLSCVKGSGRFV 462 (521)
T ss_dssp CSSSCCTTTTCE---EEEEEEEEEETTEEEEETTEECCCTTCCCBC
T ss_pred ccCCCCCcCCCE---eeeeEEEEEECCEEEEECCeecccCcCceEe
Confidence 12222211 12468999999999999999983 3445555
No 56
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A*
Probab=100.00 E-value=7e-32 Score=255.52 Aligned_cols=346 Identities=16% Similarity=0.132 Sum_probs=201.6
Q ss_pred eEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCC
Q 011766 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (478)
Q Consensus 21 ~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~ 100 (478)
++|+|++|++++ ..+.+++|+|+||||++|++..+. ..+.++||++|++|+|||||+|+|.....
T Consensus 5 ~~i~n~~i~~~~---~~~~~~~i~I~dG~I~~i~~~~~~-----~~~~~viD~~G~~v~PGfID~HvHg~~G~------- 69 (381)
T 3iv8_A 5 YALTNCKIYTGN---DVLVKHAVIINGDKIEAVCPIESL-----PSEMNVVDLNGANLSPGFIDLQLNGCGGV------- 69 (381)
T ss_dssp EEEEEEEEECSS---CEESSEEEEEETTEEEEEEEGGGS-----CTTCEEEEEEEEEEEECEEEEEECEETTE-------
T ss_pred EEEEccEEEcCC---CeEeccEEEEECCEEEEEeCCCCC-----CCCCeEEECCCCEEccCeEeeeecccCCC-------
Confidence 589999999753 456778999999999999975432 13568999999999999999999984311
Q ss_pred CCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC-HHHH-------HHHHHHhCCeEEEeccccc
Q 011766 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-VSEM-------AKAVELLGLRACLVQSTMD 172 (478)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~-~~~~-------~~~~~~~g~~~~~~~~~~~ 172 (478)
++ ....+ ........+.+++.|||+++...... ...+ .+.....+.. . .....
T Consensus 70 -~~-----------~d~~~----~e~l~~~~~a~~~~GvTt~l~t~~T~~~e~l~~al~~~~~~~~~~~~~-i--lGiHl 130 (381)
T 3iv8_A 70 -MF-----------NDEIT----AETIDTMHKANLKSGCTSFLPTLITSSDENMRQAIAAAREYQAKYPNQ-S--LGLHL 130 (381)
T ss_dssp -ET-----------TTSCS----HHHHHHHHHHHHHTTEEEEEEEEESCCHHHHHHHHHHHHHHHHHCSSS-B--CCEEE
T ss_pred -CC-----------CCCCC----HHHHHHHHHHHHhCCccccccccCCCCHHHHHHHHHHHHHHHhcCCCc-e--eEeec
Confidence 00 00011 11223345567899999999854222 2211 1111111111 0 11222
Q ss_pred CCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCcee
Q 011766 173 CGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIH 252 (478)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~ 252 (478)
.|+.+++.....+.+..+.+ ...+.++++..... .++.+.-.++.. . .+.++.+++.|+.+.
T Consensus 131 EGPfis~~~~Ga~~~~~i~~-----------p~~~~~~~~~~~~~-~i~~vTlAPE~~--~----~~~i~~l~~~gi~vs 192 (381)
T 3iv8_A 131 EGPYLNVMKKGIHSVDFIRP-----------SDDTMIDTICANSD-VIAKVTLAPENN--K----PEHIEKLVKAGIVVS 192 (381)
T ss_dssp ECSSCCGGGCTTSCTTTCCC-----------CCHHHHHHHHHTTT-SEEEEEECCTTS--C----HHHHHHHHHTTCEEE
T ss_pred cCcccCHhhcCCCCHHHcCC-----------CCHHHHHHHHhccC-CeEEEEECCCCC--c----HHHHHHHHHCCCEEE
Confidence 44444444444333333331 22233334333333 466543322221 2 244566778888887
Q ss_pred EeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCC----------------eeeeeeccCChhHHHHHHhcCCeEEECc
Q 011766 253 MHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNN----------------LLSAHTVWVNHTEIGLLSRAGVKVSHCP 316 (478)
Q Consensus 253 ~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----------------~~i~h~~~~~~~~~~~~~~~~~~~~~~p 316 (478)
+......++.....-..+. ....+.++.+..+..| .+|.++.|+++..++.+.+....-.+..
T Consensus 193 ~GHs~A~~e~~~~a~~~Ga-~~~THlfNaM~~~~hR~PG~vga~l~~~~~~~elI~DG~Hv~p~~~~~~~~~~g~~~~lv 271 (381)
T 3iv8_A 193 IGHTNATYSEARKSFESGI-TFATHLFNAMTPMVGREPGVVGAIYDTPEVYAGIIADGFHVDYANIRIAHKIKGEKLVLV 271 (381)
T ss_dssp ECSBCCCHHHHHHHHHTTC-CEESSTTSSBCCCBTTBCHHHHHHHHCTTCEEEEECSSSSSCHHHHHHHHHHHGGGEEEE
T ss_pred ecCCCCCHHHHHHHHHcCC-CEeeeCCCCCCCccCCCCchHHHHhcCCCcEEEEEcCCccCCHHHHHHHHHhcCCEEEEE
Confidence 6333322221111101111 0011222222222111 3788999999999887765431212222
Q ss_pred cchhhccCCCcHHHH-------HHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHH
Q 011766 317 ASAMRMLGFAPIKEM-------LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMA 389 (478)
Q Consensus 317 ~~~~~~~~~~~~~~~-------~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~ 389 (478)
+..++..+.++-... ++.| .+...|+...++..++++.++.+... .++|+++|++++
T Consensus 272 TDam~a~G~~dg~y~lgg~~v~v~~g--~~~l~~g~lAGs~l~l~~~v~~~v~~--------------~g~~~~~al~~a 335 (381)
T 3iv8_A 272 TDATAPAGAEMDYFIFVGKKVYYRDG--KCVDENGTLGGSALTMIEAVQNTVEH--------------VGIALDEALRMA 335 (381)
T ss_dssp CCBCTTTTSCCSEEESSSCEEEEETT--EEECTTCCBCSBCCCHHHHHHHHHHT--------------TCCCHHHHHHHH
T ss_pred eCcccccCCCCCeeecCCeEEEEECC--EEEcCCCCccChhhhHHHHHHHHHHh--------------hCCCHHHHHHHH
Confidence 333443333322211 1222 12234665566778899888776521 259999999999
Q ss_pred hHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEE
Q 011766 390 TINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMK 455 (478)
Q Consensus 390 T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~ 455 (478)
|.|||+++|+++++|+|++|++||||+||.+ .+|..||++|++||.
T Consensus 336 T~~pA~~lg~~~~~G~i~~G~~ADlvvld~~--------------------~~v~~t~~~G~~v~~ 381 (381)
T 3iv8_A 336 TLYPAKAIGVDEKLGRIKKGMIANLTVFDRD--------------------FNVKATVVNGQYEQN 381 (381)
T ss_dssp THHHHHHHTCTTTSSSCCTTSBCCEEEECTT--------------------CCEEEEEETTEEEEC
T ss_pred HHHHHHHhCCCCCCceECCCCcCCEEEECCC--------------------CCEEEEEECCEEeeC
Confidence 9999999999888899999999999999986 589999999999874
No 57
>2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.4e-32 Score=274.61 Aligned_cols=383 Identities=16% Similarity=0.165 Sum_probs=211.4
Q ss_pred cceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccc
Q 011766 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~ 97 (478)
+++++|+|++|++++ . ..+++|+|+||+|++|++..+.+... ..+.++||++|++|+|||||+|+|+.....
T Consensus 26 ~~~~lI~ng~Vv~~~---~-~~~~dV~I~dGrI~~Ig~~~~~~~~~-~~~~~vIDa~G~~V~PG~ID~H~Hl~~~~~--- 97 (541)
T 2vr2_A 26 PSRLLIRGGRVVNDD---F-SEVADVLVEDGVVRALGHDLLPPGGA-PAGLRVLDAAGKLVLPGGIDTHTHMQFPFM--- 97 (541)
T ss_dssp -CEEEEESCEEECSS---C-EEECEEEEETTEEEEEEC------------CEEEECTTSEEEECEEEEEECTTCBCS---
T ss_pred cCCEEEECcEEEcCC---C-ceEeeEEEECCEEEEeccCCCCCccc-ccCceEEECCCCEEccCEEEecccCCCCCC---
Confidence 478999999999753 2 34689999999999999754321100 012379999999999999999999854210
Q ss_pred cCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc----CHHHHHHHHHHhCCeEEEecccccC
Q 011766 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDC 173 (478)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (478)
.....++.+ ...+.++++||||++++... ......+........ ....+.
T Consensus 98 ------------------~~~~~e~~~----~~~~~al~~GvTtv~d~~~~~~~~~~~~a~~~~~~~~~~----~~~~~~ 151 (541)
T 2vr2_A 98 ------------------GSRSIDDFH----QGTKAALSGGTTMIIDFAIPQKGGSLIEAFETWRSWADP----KVCCDY 151 (541)
T ss_dssp ------------------SSBCSCCTT----HHHHHHHTTTEEEEEEEECCCTTCCHHHHHHHHHHHHTT----TCSSEE
T ss_pred ------------------CCcCHHHHH----HHHHHHHhCCeeeeccccCCCCCCCHHHHHHHHHHHhcc----CceEEE
Confidence 000111111 12345789999999986422 222222221111000 000000
Q ss_pred CCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeE
Q 011766 174 GEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHM 253 (478)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~ 253 (478)
+ +.... ......... +..++++ ..+...++.+..++..+.++.+.+.++++.+++++.++++
T Consensus 152 g--~h~~~-~~~~~~~~~------------el~~l~~---~~G~~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~ 213 (541)
T 2vr2_A 152 S--LHVAV-TWWSDQVKE------------EMKILVQ---DKGVNSFKMFMAYKDLYMVTDLELYEAFSRCKEIGAIAQV 213 (541)
T ss_dssp E--EEEEE-CSCSHHHHH------------HHHHHHH---TSCCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEE
T ss_pred e--eeecc-cCCCHHHHH------------HHHHHHH---hCCCCEEEEEeccCCccCCCHHHHHHHHHHHHHcCCEEEE
Confidence 0 00000 000000000 2222222 2345567766666677778999999999999999999999
Q ss_pred eccCChhhhHHHh--hhcCCCC---------chHHHHh------hhCCCCCCeeeeeecc-CChhHHHHHHhcCCeEEEC
Q 011766 254 HVAEIPYENQVVM--DTRKVDH---------GTVTFLD------KIEFLQNNLLSAHTVW-VNHTEIGLLSRAGVKVSHC 315 (478)
Q Consensus 254 H~~~~~~~~~~~~--~~~~~~~---------~~~~~l~------~~~~~~~~~~i~h~~~-~~~~~~~~~~~~~~~~~~~ 315 (478)
|+.+......... ...+... ...+... ..........+.|... ...+.++.+++.|..+. +
T Consensus 214 H~e~~~~~~~~~~~l~~~G~~~~~~h~~~~~~~~e~~a~~~~~~la~~~~~p~~~~h~ss~~~~~~i~~ar~~G~~v~-~ 292 (541)
T 2vr2_A 214 HAENGDLIAEGAKKMLALGITGPEGHELCRPEAVEAEATLRAITIASAVNCPLYIVHVMSKSAAKVIADARRDGKVVY-G 292 (541)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEEEEECCHHHHHHHHHHHHTTCCEE-E
T ss_pred EcCCHHHHHHHHHHHHHcCCCChhhccccchhHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHcCCeEE-E
Confidence 9954321111111 1111110 0011110 0111223344455432 11233455667776542 2
Q ss_pred ccchhhc------------------cCCCc----------HHHHHHCCCcEEEcCCCCCCCCCcCHHHH-----------
Q 011766 316 PASAMRM------------------LGFAP----------IKEMLHADICVSLGTDGAPSNNRMSIVDE----------- 356 (478)
Q Consensus 316 p~~~~~~------------------~~~~~----------~~~~~~~gv~v~~gsD~~~~~~~~~~~~~----------- 356 (478)
+.....+ ...+| +.+++..|+..+++||+.++. +...
T Consensus 293 e~~~~~L~~d~~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~g~~~~~gtD~~~~~----~~~k~~~~~~~~~~p 368 (541)
T 2vr2_A 293 EPIAASLGTDGTHYWNKEWHHAAHHVMGPPLRPDPSTPDFLMNLLANDDLTTTGTDNCTFN----TCQKALGKDDFTKIP 368 (541)
T ss_dssp EEBHHHHHCCSGGGGCSSHHHHHTTCCSSCCCSCTTHHHHHHHHHHTTSSCCCBCCBCCCC----HHHHGGGSSCGGGSC
T ss_pred EeehhhhcCCHHHhcCccccccCceEECCCCCCCcchHHHHHHHHhcCCeEEEEeCCCCCC----hHHhcccCCChhhCC
Confidence 2211110 01122 345788999999999987642 1110
Q ss_pred -------HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCc--
Q 011766 357 -------MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPV-- 427 (478)
Q Consensus 357 -------~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~-- 427 (478)
.++....... ....++|++++++++|.|||+++|+++++|+|++|++|||||||.+..+..+.
T Consensus 369 ~G~~G~e~~l~~~~~~~--------v~~~~l~~~~~~~~~T~~pA~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~ 440 (541)
T 2vr2_A 369 NGVNGVEDRMSVIWEKG--------VHSGKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSDADIVIWDPKGTRTISAKT 440 (541)
T ss_dssp CCBCCTTTHHHHHHHHH--------TTTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSBCCEEEEEEEEEEECCTTT
T ss_pred CCCccHHHHHHHHHHHH--------HHcCCCCHHHHHHHHhHHHHHHhCCCCCCCccCCCCCCCEEEEcCCcCeEeCHHH
Confidence 0111111100 12346999999999999999999998889999999999999999874322221
Q ss_pred ------CChhhhhhhccCCCCeeEEEEccEEEEECCeeecc-cHHHHH
Q 011766 428 ------HDRITSLVYCMRTENVVSVMCNGQWVMKNKKILLL-MRGRLF 468 (478)
Q Consensus 428 ------~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~-~~~~~~ 468 (478)
.+|+..... ...|..||++|++||++|+++.. ..|+++
T Consensus 441 ~~~~~~~~p~~g~~~---~g~v~~v~v~G~~v~~~g~~~~~~~~G~~~ 485 (541)
T 2vr2_A 441 HHQAVNFNIFEGMVC---HGVPLVTISRGKVVYEAGVFSVTAGDGKFI 485 (541)
T ss_dssp CSSSCSCCTTTTCEE---EEEEEEEEETTEEEEETTEECCCTTCSCBC
T ss_pred hhcccCCCccCCCEE---eeeEEEEEECCEEEEECCeeccCCCCceEe
Confidence 233332221 13689999999999999999843 345544
No 58
>3mkv_A Putative amidohydrolase; sargasso SEA, structural genomics, protein structure initiat NEW YORK structural genomix research consortium, nysgxrc; HET: KCX; 2.40A {Undefined}
Probab=100.00 E-value=1.2e-30 Score=254.49 Aligned_cols=371 Identities=16% Similarity=0.166 Sum_probs=193.1
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~ 96 (478)
+|.+++|+||+|+|+++ +.++++++|+|+||||++|++.... +.++++||++|++|+|||||+|+|+.......
T Consensus 2 sM~~lli~ng~i~d~~~-~~~~~~~dV~I~~G~I~~Ig~~~~~-----~~~~~vID~~G~~v~PGfID~H~H~~~~~~~~ 75 (426)
T 3mkv_A 2 SLTTFLFRNGALLDPDH-PDLLQGFEILIEDGFIREVSDKPIK-----SSNAHVIDVKGKTIMPGLIDLHVHVVAIEFNL 75 (426)
T ss_dssp -CCEEEEEEEEECCTTS-SSCEEEEEEEEETTEEEEEESSCCC-----CSSCEEEECTTCEEEECEEEEEECTTCCSSCH
T ss_pred CcCcEEEECeEEEeCCC-CcEecCcEEEEECCEEEEecCCCCC-----CCCCEEEECCCCEEEeChhhhhhCcccccCCc
Confidence 57789999999997654 3567888999999999999986432 24679999999999999999999985432110
Q ss_pred ccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCHHHHHHHHHHhC----CeEEEeccccc
Q 011766 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLG----LRACLVQSTMD 172 (478)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~ 172 (478)
. ........................++|+............ .....+ ...........
T Consensus 76 -------~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 137 (426)
T 3mkv_A 76 -------P---------RVATLPNVLVTLRAVPIMRAMLRRGFTTVRDAGGAGYPFK--QAVESGLVEGPRLFVSGRALS 137 (426)
T ss_dssp -------H---------HHTTSCHHHHHHHHHHHHHHHHHTTEEEEEECSSCCHHHH--HHHHTTSSCCCEEEECCSEEE
T ss_pred -------c---------cccccchhHHHHHHHhhhhhhhcccccccccccccchhhh--hHhhccceeeceecccccccc
Confidence 0 0111222222223333445566778888776654433221 112222 21111111110
Q ss_pred C--CCCCCCccc---ccCCcccC-CCCCCccc-cccchhHHHHHHHhcCCCCCCeEEEE--------eccccccCCHHHH
Q 011766 173 C--GEGLPASWA---VRTTDDCI-QPDSSISF-NFVSSSQKELYAKHHHAADGRIRIWF--------GIRQIMNATDRLL 237 (478)
Q Consensus 173 ~--~~~~~~~~~---~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l 237 (478)
. +........ ........ ........ .................+........ .............
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (426)
T 3mkv_A 138 QTGGHADPRARSDYMPPDSPCGCCVRVGALGRVADGVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEI 217 (426)
T ss_dssp CTTSTTCCCCCSSBCCCSSSCSSBCCTTCSEEECCSHHHHHHHHHHHHHHTCSSEEEECBCCSSCSSCCTTSBCSCHHHH
T ss_pred ccccccchhhhhhccccccccchhhhhccccccccCHHHHHHHHHHHhhcccccccccccccccccccccccchhhHHHH
Confidence 0 000000000 00000000 00000000 00011222222222111111111111 1112223445555
Q ss_pred HHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECcc
Q 011766 238 LETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPA 317 (478)
Q Consensus 238 ~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~ 317 (478)
...+..+.........+............ .+ .....+...............+.....++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (426)
T 3mkv_A 218 RAIVAEAQGRGTYVLAHAYTPAAIARAVR---------------CG----VRTIEHGNLIDDETARLVAEHGAYVVPTLV 278 (426)
T ss_dssp HHHHHHHHTTTCCEEEEECSHHHHHHHHH---------------TT----CCEEEECTTCCHHHHHHHHHHTCEEECCHH
T ss_pred HHHHHHHHhcccceeehhhhhhhHHHHHh---------------hc----cccccccccccchhhhhhhhcCcccccccc
Confidence 56666666666666555544322111110 00 011222233333334444444444433332
Q ss_pred chh----------------------hccCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCC
Q 011766 318 SAM----------------------RMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTT 375 (478)
Q Consensus 318 ~~~----------------------~~~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (478)
... ...+..+...+...|+.+.+++|....... .....+.. ..
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~d~~~~~~~-~~~~~~~~---~~----------- 343 (426)
T 3mkv_A 279 TYDALASEGEKYGLPPESIAKIADVHGAGLHSIEIMKRAGVKMGFGTDLLGEAQR-LQSDEFRI---LA----------- 343 (426)
T ss_dssp HHHHHHHHTTTTTCCHHHHTTHHHHHTTHHHHHHHHHHHTCCBCCCCCCCGGGGG-GTTHHHHH---HH-----------
T ss_pred chhhhhhhhhhccccccccccccccccccchhhHHhhhcCceeeeccCCcccccc-hHHHHHHH---HH-----------
Confidence 110 012234566788899999999998654211 11122211 11
Q ss_pred CCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEE
Q 011766 376 DPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMK 455 (478)
Q Consensus 376 ~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~ 455 (478)
.++|++|||+++|.|||+++|+++++|+|++||+|||||||.||+. |+.. ......+|.+||++||+|..
T Consensus 344 --~gls~~eal~~~T~~pA~~lgl~~~~Gsi~~G~~ADlvvlD~dPl~-----di~~---~~~~~~~v~~Vi~~G~vv~~ 413 (426)
T 3mkv_A 344 --EVLSPAEVIASATIVSAEVLGMQDKLGRIVPGAHADVLVVDGNPLK-----SVDC---LLGQGEHIPLVMKDGRLFVN 413 (426)
T ss_dssp --TTSCHHHHHHHTTHHHHHHTTCBTTBSSCCTTSBCCEEEESSCTTT-----CSTT---TCSSSTTCCEEEETTEEEEE
T ss_pred --hCCCHHHHHHHHHHHHHHHhCCCCCcceeCCCCcceEEEECCChHH-----hHHH---HhCCCCCccEEEECCEEEEC
Confidence 2599999999999999999999998999999999999999999553 2110 11234679999999997653
No 59
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=99.98 E-value=1.8e-30 Score=263.01 Aligned_cols=332 Identities=20% Similarity=0.252 Sum_probs=201.0
Q ss_pred CccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhc
Q 011766 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (478)
Q Consensus 16 ~~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~ 95 (478)
..+++++|+|++|+++.. ..+..++|+|+||||++|++... ...+.++||++|++|+|||||+|+|+....
T Consensus 32 ~~~~dlli~n~~ivd~~~--~~~~~~dI~I~~G~I~~Vg~~~~-----~~~~~~vID~~G~~v~PG~ID~H~Hl~~~~-- 102 (608)
T 3nqb_A 32 DQRFDVLITGGTLVDVVT--GELRPADIGIVGALIASVHEPAS-----RRDAAQVIDAGGAYVSPGLIDTHMHIESSM-- 102 (608)
T ss_dssp SSCEEEEEESCEEECTTT--CCEEECEEEEETTEEEEEECTTS-----CCCEEEEEECTTSEEEECEEEEEECGGGGT--
T ss_pred CCCCCEEEECeEEEECCC--CeEEeeEEEEECCEEEEecCCCC-----CCCCCeEEeCCCCEEecCeEecccCccccc--
Confidence 456799999999997543 34567799999999999997531 113568999999999999999999994311
Q ss_pred cccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccC--------HHHHHHHHHHhCCeEEEe
Q 011766 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------VSEMAKAVELLGLRACLV 167 (478)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~--------~~~~~~~~~~~g~~~~~~ 167 (478)
++.+ ...+.++.+|||++++.+... .....+.....+.+.+..
T Consensus 103 ----------------------~~~~-------~~~~~al~~GvTtvv~~p~~~~~v~g~~~~~~~l~~a~~~~~~v~~~ 153 (608)
T 3nqb_A 103 ----------------------ITPA-------AYAAAVVARGVTTIVWDPHEFGNVHGVDGVRWAAKAIENLPLRAILL 153 (608)
T ss_dssp ----------------------SCHH-------HHHHHHHTTTEEEEEECCHHHHHHHTHHHHHHHHHHHTTCSSEEEEE
T ss_pred ----------------------CCHH-------HHHHHHHhCCeEEEEcCCccccccCCHHHHHHHHHHhhhcCcEEEEe
Confidence 1111 123567999999999743211 112233334455555544
Q ss_pred cccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHc
Q 011766 168 QSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 247 (478)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~ 247 (478)
.+... |............. ..+..++++ ..+...+..+...... ....+.+.+.++.|++.
T Consensus 154 ~p~~~-----P~~~~~~~~g~~~~----------~~el~~l~~---~~~v~glgE~~~~~~v-~~~d~~l~~~l~~A~~~ 214 (608)
T 3nqb_A 154 APSCV-----PSAPGLERGGADFD----------AAILADLLS---WPEIGGIAEIMNMRGV-IERDPRMSGIVQAGLAA 214 (608)
T ss_dssp ECCCS-----SSSTTSCCCSCCCC----------HHHHHHHHT---STTEEEEEEECCHHHH-HTTCHHHHHHHHHHHHH
T ss_pred ccccC-----CCCCccccCcccCC----------HHHHHHHHh---ccCcceeeEeeccCCc-CCCcHHHHHHHHHHHHc
Confidence 32111 11000000000000 012233222 1111111111111111 13456678888999999
Q ss_pred CCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEECccchhhccCCCc
Q 011766 248 KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAP 327 (478)
Q Consensus 248 ~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 327 (478)
|.++.+|+.+.... ....+...+ ....|+....++.++++ +.|..+.+. .+... ....
T Consensus 215 g~pV~~Ha~~~~~~-------------~L~~~~~aG-----v~~~H~~~~~eea~e~l-~~G~~i~i~-gs~~~--~~~~ 272 (608)
T 3nqb_A 215 EKLVCGHARGLKNA-------------DLNAFMAAG-----VSSDHELVSGEDLMAKL-RAGLTIELR-GSHDH--LLPE 272 (608)
T ss_dssp TCEEEECCTTCCHH-------------HHHHHHHTT-----CCEECCCCSHHHHHHHH-HTTCEEEEE-SSSGG--GHHH
T ss_pred CCEEEEcCCCCCHH-------------HHHHHHHcC-----CCeeeccCCHHHHHHHH-HCCCEEEEe-ccccc--cHHH
Confidence 99999998754321 111222222 12378888776666665 568877765 22211 1122
Q ss_pred HHHHHH----CCCcEEEcCCCCCCCC---CcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 011766 328 IKEMLH----ADICVSLGTDGAPSNN---RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 400 (478)
Q Consensus 328 ~~~~~~----~gv~v~~gsD~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~ 400 (478)
+..++. .|++++++||+..... ...+...++.+. +.+++++++++++|.|||+++|+
T Consensus 273 l~~~i~~~~~~g~~v~lgTD~~~p~~~~~~g~l~~~v~~~~---------------~~Gls~~eal~~aT~n~A~~lgl- 336 (608)
T 3nqb_A 273 FVAALNTLGHLPQTVTLCTDDVFPDDLLQGGGLDDVVRRLV---------------RYGLKPEWALRAATLNAAQRLGR- 336 (608)
T ss_dssp HHHHHHHHTSCCTTEEEECBSCCHHHHHHTCSHHHHHHHHH---------------HTTCCHHHHHHHHTHHHHHHHTC-
T ss_pred HHHHHHhHhhcCceEEEecCCCCCcchhhhcchHHHHHHHH---------------HcCCCHHHHHHHHHHHHHHHcCC-
Confidence 333333 7899999999632100 011122222211 12599999999999999999999
Q ss_pred CCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeee
Q 011766 401 NDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKIL 460 (478)
Q Consensus 401 ~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~ 460 (478)
+++|+|++|+.||||++|.- ...+|..||++|++|+++|+++
T Consensus 337 ~~~G~i~~G~~ADlvv~d~l------------------~~~~v~~v~~~G~~v~~~g~~~ 378 (608)
T 3nqb_A 337 SDLGLIAAGRRADIVVFEDL------------------NGFSARHVLASGRAVAEGGRML 378 (608)
T ss_dssp TTSSCCSTTSBCCEEEESCT------------------TTCCEEEEEETTEEEEETTEEC
T ss_pred CCCcCcCCCCCccEEEECCC------------------CCCcceEEEECCEEEEECCeEe
Confidence 46899999999999999961 1258999999999999999986
No 60
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=99.97 E-value=3.9e-32 Score=281.00 Aligned_cols=343 Identities=14% Similarity=0.150 Sum_probs=185.4
Q ss_pred ccceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhh------h-hhhccCCCeEEeCCCCEEeeccccccccc
Q 011766 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADI------L-QQFSQMADQIIDLQSQILLPGFVNTHVHT 89 (478)
Q Consensus 17 ~~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~------~-~~~~~~~~~viD~~G~~v~PGfID~H~H~ 89 (478)
...|++|+|++|+|++ . +.++||+|+||||++||+.... . .-..+++++|||++|++|+|||||+|+|+
T Consensus 335 ~~~DLVItNA~IVD~t---G-i~kADI~IkDGRIaAIGkagnpD~~dgV~pdl~ig~gtEVIDA~GkiVtPGfID~HvHl 410 (840)
T 4gy7_A 335 ISLDTVITNAVIIDYT---G-IIKADIGIKDGLIASIGKAGNPDIMNGVFSNMIIGANTEVIAGEGLIVTAGAIDCHVHY 410 (840)
T ss_dssp GSCSEEEEEEEEEETT---E-EEEEEEEEETTEEEEEECCBCTTTCSSCCTTSBCCTTCEEEECTTCEEEECEEEEEEEC
T ss_pred ccCCEEEeCeEEECCC---C-eEEeeEEEECCEEEEEeccCCcccccccccccccCCCCEEEECCCCEEccCeeeeccCC
Confidence 4579999999999753 2 3678999999999999964211 0 00123577999999999999999999998
Q ss_pred chhhhccccCCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCccCH------------HHHHHHH
Q 011766 90 SQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV------------SEMAKAV 157 (478)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~------------~~~~~~~ 157 (478)
... . ...+++.+|+||+++.+.... .......
T Consensus 411 ~~P-----------------------------~-------~~~eALasGVTTvv~gGtgp~~~~~~~~~~~~~~~~~~~l 454 (840)
T 4gy7_A 411 ICP-----------------------------Q-------LVYEAISSGITTLVGGGTGPAAGTRATTCTPSPTQMRLML 454 (840)
T ss_dssp CCT-----------------------------H-------HHHHHHHHTEEEEEEECSSSCHHHHHSSCCCSHHHHHHHH
T ss_pred CCC-----------------------------C-------chHHHHHhhHHHHHhCCCceecCcccccccchHHHHHHHH
Confidence 321 0 012357789999987543211 1111111
Q ss_pred H---HhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCH
Q 011766 158 E---LLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATD 234 (478)
Q Consensus 158 ~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (478)
. ...+..... ......... ...+..+. +...++ ....+..++
T Consensus 455 ~a~~~~~vn~g~~---------------~~~~~~~~~------------~L~el~~a----Ga~g~K----~~~~~~~t~ 499 (840)
T 4gy7_A 455 QSTDDLPLNFGFT---------------GKGSSSKPD------------ELHEIIKA----GAMGLK----LHEDWGSTP 499 (840)
T ss_dssp HHTTTSSSEEEEE---------------EECCCSSSH------------HHHHHHHH----TCSEEE----EETTTCCCH
T ss_pred hhhhcceeEEEEe---------------CCCCcccHH------------HHHHhhhc----eeeEEE----eccccCCCH
Confidence 1 111111100 000000000 23332222 222233 233445678
Q ss_pred HHHHHHHHHHHHcCCceeEeccCChhh---hHHHhhhcCCC-----------CchHHHHhhhCCCCCCeeeeeeccC-C-
Q 011766 235 RLLLETRDMAREFKTGIHMHVAEIPYE---NQVVMDTRKVD-----------HGTVTFLDKIEFLQNNLLSAHTVWV-N- 298 (478)
Q Consensus 235 ~~l~~~~~~a~~~~~~v~~H~~~~~~~---~~~~~~~~~~~-----------~~~~~~l~~~~~~~~~~~i~h~~~~-~- 298 (478)
+.+.++++.+++++..+.+|....... ........... ......+...+ ....+.+.... .
T Consensus 500 ~~i~~aL~~A~e~g~~V~ih~e~~~~~~~vee~laA~~g~~~h~~~~e~~~~~~A~dii~~~~---~a~~l~~~t~~~~~ 576 (840)
T 4gy7_A 500 AAIDNCLTIAEHHDIQINIHTDTLNEAGFVEHSIAAFKGRTIHTYHSEGAGGGHAPDIIKVCG---IKNVLPSSTNPTRP 576 (840)
T ss_dssp HHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHHTTCCEEETTTTSTTSCSTTTGGGGGG---CTTEEEEEESTTSS
T ss_pred HHHHHHHHHHHHhCCEEEEeccCcchhHHHHHHHHhhcCCcccceeccccccccchHHHHHhh---cccceeeEeeccch
Confidence 889999999999999999998543211 11111100000 00001111111 00111111110 0
Q ss_pred ------hhHHHHHHh-cCCeEEECccchhh------ccCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHH-HHHHHHHHh
Q 011766 299 ------HTEIGLLSR-AGVKVSHCPASAMR------MLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVD-EMYLASLIN 364 (478)
Q Consensus 299 ------~~~~~~~~~-~~~~~~~~p~~~~~------~~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~-~~~~~~~~~ 364 (478)
.+.+..... ..... ..+..... .........+.+.|+..+++||+.+......... .+.......
T Consensus 577 ~~~~~~~e~l~~~~~~~~l~~-~i~ed~~~~~s~~~~~~~a~~~ll~dlGvi~~isSD~~p~~~~~e~~~~~~~~a~~~~ 655 (840)
T 4gy7_A 577 LTSNTIDEHLDMLMVCHHLDR-EIPEDLAFAHSRIRKKTIAAEDVLNDIGAISIISSDSQAMGRVGEVISRTWQTADKMK 655 (840)
T ss_dssp CBTTHHHHHHHHHHHHTTCCT-TSHHHHHHHHHHSCHHHHHHHHHHHHTTSSCEEECCBTTTBCGGGHHHHHHHHHHHHH
T ss_pred hhhhhhhhhheeEEeeeccCc-cchhhhhhccCcCCccchhHHHHHHhCCCeEEEeccccccccccccchhhhcccccch
Confidence 111111110 00000 00000000 0112233456778999999999876543222221 111111111
Q ss_pred cccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCee
Q 011766 365 KGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVV 444 (478)
Q Consensus 365 ~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~ 444 (478)
..+...........++++++|++++|.|||+++|+++++|+|++||+|||||||+..+ ..++.
T Consensus 656 ~~~g~~~~e~~~~~~Lsl~eAIr~aTiNPAraLGLddr~GSIEpGK~ADLVLfDPa~F-----------------GvKPe 718 (840)
T 4gy7_A 656 AQTGPLKCDSSDNDNFRIRRYIAKYTINPAIANGFSQYVGSVEVGKLADLVMWKPSFF-----------------GTKPE 718 (840)
T ss_dssp HHHCSCTTSCSSCCHHHHHHHHHTTTHHHHHHHTCTTTSSSSCTTSBCCEEEECGGGT-----------------TTCCS
T ss_pred hhcccchhhhhhcCCCCHHHHHHHHHHHHHHHhCCCCCccccCCCCcceEEEECchHc-----------------CCCCe
Confidence 1111111112234569999999999999999999999999999999999999998632 25899
Q ss_pred EEEEccEEEEE
Q 011766 445 SVMCNGQWVMK 455 (478)
Q Consensus 445 ~v~v~G~~v~~ 455 (478)
.|+++|++||.
T Consensus 719 ~Vik~G~Iv~~ 729 (840)
T 4gy7_A 719 MVIKGGMVAWA 729 (840)
T ss_dssp EEEETTEEEEE
T ss_pred EEEECCEEEEc
Confidence 99999999984
No 61
>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A*
Probab=99.97 E-value=5.5e-30 Score=249.03 Aligned_cols=339 Identities=19% Similarity=0.189 Sum_probs=198.2
Q ss_pred ceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhcccc
Q 011766 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (478)
Q Consensus 19 ~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~ 98 (478)
..++|+|++|++++ . ..+++|+|+||+|++|++..+.. . ..+.++||++|++|+|||||+|+|+....
T Consensus 8 ~~~~i~n~~v~~~~---~-~~~~~v~i~~g~I~~ig~~~~~~--~-~~~~~viD~~g~~v~PG~iD~H~H~~~~~----- 75 (390)
T 1onw_A 8 GFTLLQGAHLYAPE---D-RGICDVLVANGKIIAVASNIPSD--I-VPNCTVVDLSGQILCPGFIDQHVHLIGGG----- 75 (390)
T ss_dssp CCEEEESCEEESSS---E-EEECEEEEETTEEEEEETTCCTT--S-SSSCEEEECTTCEEEECEEEEEECTTCCB-----
T ss_pred ceEEEECcEEECCC---C-CccceEEEECCEEEEEecCcccC--C-CCCCeEEeCCCCEECcCeeEeeECccccC-----
Confidence 35789999999753 2 45679999999999999753210 1 12458999999999999999999984311
Q ss_pred CCCCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecCCcc-----CH---HHHHHHHHHhCCeEEEeccc
Q 011766 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HV---SEMAKAVELLGLRACLVQST 170 (478)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~-----~~---~~~~~~~~~~g~~~~~~~~~ 170 (478)
....+.. .+.+ ....+++++||||++++.+. .. ....+.....|++.+.....
T Consensus 76 ~~~~~~~------------~~~~-------~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~g~ 136 (390)
T 1onw_A 76 GEAGPTT------------RTPE-------VALSRLTEAGVTSVVGLLGTDSISRHPESLLAKTRALNEEGISAWMLTGA 136 (390)
T ss_dssp CTTSGGG------------BCCC-------CCHHHHHHTTEEEEEECCCSCCSSCCHHHHHHHHHHHHHHTSEEEEEEEC
T ss_pred ccccccc------------cCHH-------HHHHHHHHCCeeEEecCCCcccccCcHHHHHHHHHHHHhcCCceEEeccc
Confidence 0001100 0111 12345789999999997532 12 22344455667765433221
Q ss_pred ccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCC-
Q 011766 171 MDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT- 249 (478)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~- 249 (478)
+.. +... ... ......... ....+ .+..+.++..+..+.+.+.++.+.++..+.
T Consensus 137 ~~~----~~~~-------~~~------------~~~~~~~~~-~~~~g-~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~ 191 (390)
T 1onw_A 137 YHV----PSRT-------ITG------------SVEKDVAII-DRVIG-VKCAISDHRSAAPDVYHLANMAAESRVGGLL 191 (390)
T ss_dssp SCS----SCCC-------SSS------------CHHHHHHHC-TTEEE-EEEEESSTTSCCCCHHHHHHHHHHHHHHHHH
T ss_pred cCC----Cchh-------hhh------------hhcchhhhH-HHhhc-ceeeecCCCCCCCCHHHHHHHHHHHhhhhhh
Confidence 110 1000 000 111111111 11011 134445555556788888888877766543
Q ss_pred -----ceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCe-eeeeeccCCh----hHHHHHHhcCCeEEECccch
Q 011766 250 -----GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNL-LSAHTVWVNH----TEIGLLSRAGVKVSHCPASA 319 (478)
Q Consensus 250 -----~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~i~h~~~~~~----~~~~~~~~~~~~~~~~p~~~ 319 (478)
.+++|..+.....+.... .+ ..+...... ...|. +..+ +.++.+++.+.....++...
T Consensus 192 ~~~~g~~~~h~~~~~~~~~~~~~----------~~-~~g~~~v~~l~~~h~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (390)
T 1onw_A 192 GGKPGVTVFHMGDSKKALQPIYD----------LL-ENCDVPISKLLPTHV-NRNVPLFEQALEFARKGGTIDITSSIDE 259 (390)
T ss_dssp HTSCCEEEEEECSCTTTTHHHHH----------HH-HTCCCCGGGEEEECG-GGSHHHHHHHHHHHHTTCCEEEETTCCS
T ss_pred hccCceEEEEeCCCHHHHHHHHH----------HH-hccCCceEEeecccc-ccCHHHHHHHHHHHhcCCccccccccCC
Confidence 367787543332222111 11 111111111 11343 2233 34455555554444443221
Q ss_pred hhccCCCcHHHHHHCCCc---EEEcCCCCCCCCC---------------cCHHHHHHHHHHHhcccccccCCCCCCCCCC
Q 011766 320 MRMLGFAPIKEMLHADIC---VSLGTDGAPSNNR---------------MSIVDEMYLASLINKGREVFANGTTDPAALP 381 (478)
Q Consensus 320 ~~~~~~~~~~~~~~~gv~---v~~gsD~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls 381 (478)
. .....+++.+++.|++ ++++||+.+.... ..+...++... . ..++|
T Consensus 260 ~-~~~~~~l~~~~~~g~~~d~i~l~TD~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~------------~~~~~ 324 (390)
T 1onw_A 260 P-VAPAEGIARAVQAGIPLARVTLSSDGNGSQPFFDDEGNLTHIGVAGFETLLETVQVLV--K------------DYDFS 324 (390)
T ss_dssp S-SCHHHHHHHHHHTTCCGGGEEEECCBTCC-------------CCCCSHHHHHHHHHHH--H------------HHCCC
T ss_pred C-CcCHHHHHHHHHcCCCccceEEEccCCCCCcccCCccccccccCCCHHHHHHHHHHHH--H------------HcCCC
Confidence 1 1334578889999974 8999998543110 11222222111 0 12599
Q ss_pred HHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECCeeec
Q 011766 382 AETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILL 461 (478)
Q Consensus 382 ~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~ 461 (478)
++++++++|.|||+++|++ ++|+|++|++|||||+|.+ ..|..||++|++|+++|+++.
T Consensus 325 ~~~~~~~~t~npA~~~gl~-~~G~i~~G~~ADlvv~d~~--------------------~~v~~v~~~G~~v~~~g~~~~ 383 (390)
T 1onw_A 325 ISDALRPLTSSVAGFLNLT-GKGEILPGNDADLLVMTPE--------------------LRIEQVYARGKLMVKDGKACV 383 (390)
T ss_dssp HHHHHGGGTHHHHHHTTCT-TCSSCCTTSBCCEEEECTT--------------------CCEEEEEETTEEEEETTEESS
T ss_pred HHHHHHHHhHHHHHHhCCC-CCcccCCCCcCCEEEEcCC--------------------CcEEEEEECCEEEEECCeEcc
Confidence 9999999999999999994 5799999999999999986 378999999999999999874
No 62
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10
Probab=99.96 E-value=4.9e-29 Score=240.02 Aligned_cols=316 Identities=14% Similarity=0.145 Sum_probs=182.2
Q ss_pred ecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccchhhhccccCCCCchHHhhhccccccCCC
Q 011766 39 RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNM 118 (478)
Q Consensus 39 ~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (478)
.+++|+|+||+|++|++ . + || +|++|+|||||+|+|+.+.... .. .
T Consensus 28 ~~~~V~I~~g~I~~vg~-----------~-~-iD-~g~~v~PGlID~H~H~~~~~~~-------------------~~-~ 73 (376)
T 1o12_A 28 FTGDVEIEEGKIVKVEK-----------R-E-CI-PRGVLMPGFVDPHIHGVVGADT-------------------MN-C 73 (376)
T ss_dssp EEEEEEEETTEEEEEEE-----------C-C-SC-CSSEEEECEEEEEECEETTEET-------------------TT-T
T ss_pred cCceEEEECCEEEEeCC-----------C-c-cC-CCCEEccCeEEEeecCCCCCCC-------------------Ch-h
Confidence 57799999999999975 1 4 89 9999999999999999542210 00 0
Q ss_pred ChHHHHHHHHHHHHHHHhcCcceeecCCccCH--------HHHHHHHHH-hCCeEEEecccccCCCCCCCcccccCCccc
Q 011766 119 TEEDSYISTLLCGIELIHSGVTCFAEAGGQHV--------SEMAKAVEL-LGLRACLVQSTMDCGEGLPASWAVRTTDDC 189 (478)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~--------~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (478)
+ ......+++++||||+++++.... ....+..+. .|.+... ....+..+............
T Consensus 74 ~-------l~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~g---~~~~g~~~~~~~~g~~~~~~ 143 (376)
T 1o12_A 74 D-------FSEMEEFLYSQGVTTFLATTVSTSLEKMKEILRKARDYILENPSTSLLG---VHLEGPYISKEKKGAHSEKH 143 (376)
T ss_dssp C-------HHHHHHHHHTTTEEEEEEECCSCCHHHHHHHHHHHHHHHHHCTTCSEEE---EEEECSSSCGGGCTTSCTTT
T ss_pred h-------HHHHHHHHHhCCcEEEEeccCCCCHHHHHHHHHHHHHHhhccCCCceEE---EEEEcCcCCcccCCCCCHHH
Confidence 0 122456789999999999764321 122233333 3522211 11111111111111111111
Q ss_pred CCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeE-eccCChhhhHHHhhh
Q 011766 190 IQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHM-HVAEIPYENQVVMDT 268 (478)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~ 268 (478)
+. ....+.++++ ........+.+..... +++++|++.|+++++ |+.+...+.......
T Consensus 144 ~~-----------~~~~~~~~~~---~~~~~~~~~~pe~~~~-------~~i~~A~~~g~~v~igH~~~~~~~i~~a~~~ 202 (376)
T 1o12_A 144 IR-----------PPSERELSEI---DSPAKMLTFAPEIESS-------ELLLRLVKRDIVLSAGHSIATFEEFMKFYKE 202 (376)
T ss_dssp CC-----------CCCHHHHTTC---CTTEEEEEECTTSTTG-------GGGGGGGGGTCEEEECSBCCCHHHHHHHHTT
T ss_pred hc-----------CCCHHHHHHh---hCCeEEEEEccCCccH-------HHHHHHHHCCCEEEeecCccCHHHHHHHHHC
Confidence 11 0113334443 1122222233322111 467889999999999 987654443322221
Q ss_pred --cCCCC-----chHH-----HHhhhCCCCCCe---eeeeeccCChhHHHHHHhc-CCeEEECccchhhc-cCCCcHHHH
Q 011766 269 --RKVDH-----GTVT-----FLDKIEFLQNNL---LSAHTVWVNHTEIGLLSRA-GVKVSHCPASAMRM-LGFAPIKEM 331 (478)
Q Consensus 269 --~~~~~-----~~~~-----~l~~~~~~~~~~---~i~h~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~-~~~~~~~~~ 331 (478)
....| .... .+... ....+. ++.|+.++++++++.+.+. +.. ..++.++... .+.++.. +
T Consensus 203 G~~~itH~~~~~~~~~~~~~g~~~~~-l~~~~~~~~~~~~~~~~~p~~~~~~~~~~g~~-~~~~~sd~~~~~g~~~g~-~ 279 (376)
T 1o12_A 203 GVKRITHFPNGLKPLHHREIGITGAG-LLLDDVKLELICDGVHLSREMVKLVYKVKKAN-GIVLVTDSISAAGLKDGT-T 279 (376)
T ss_dssp TCCEESSTTTTBCCCCSSCCHHHHHH-HHCTTCEEEEECSSSSSCHHHHHHHHHHHTGG-GEEEECCBCTTTTSCSCE-E
T ss_pred CCCeEEecccCcCChhhcccchhhhh-hcCCcceEEEeCCCcCcCHHHHHHHHhhCCCC-CEEEecCchhhcCCCCee-E
Confidence 00000 0000 11000 001233 5689999999999998877 553 2333333322 2333322 2
Q ss_pred HHCCCcEEE--c----CCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccc
Q 011766 332 LHADICVSL--G----TDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGS 405 (478)
Q Consensus 332 ~~~gv~v~~--g----sD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~ 405 (478)
...|+++.+ + +|....+...+++.+|+.+... .++|++++++++|.|||+++|++++ |+
T Consensus 280 ~~~g~~~~~~~g~~~~~~g~~~g~~~~l~~~l~~~~~~--------------~~~~~~~~l~~~T~~~A~~lgl~~~-G~ 344 (376)
T 1o12_A 280 TLGDLVVKVKDGVPRLEDGTLAGSTLFFSQAVKNFRKF--------------TGCSITELAKVSSYNSCVELGLDDR-GR 344 (376)
T ss_dssp ESSSSEEEEETTEEECTTSCBCCBCCCHHHHHHHHHHH--------------HCCCHHHHHHHHTHHHHHHTTCTTS-SC
T ss_pred EECCeEEEEeCCeEEeCCCcccccccCHHHHHHHHHHH--------------cCCCHHHHHHHHHHHHHHHhCCCCC-cc
Confidence 223444444 2 3433333556788888765432 1599999999999999999999765 99
Q ss_pred cccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEECC
Q 011766 406 LEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNK 457 (478)
Q Consensus 406 l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~~g 457 (478)
|++|++|||+++|.+ .+|..||++|++|++++
T Consensus 345 i~~G~~ADlv~~d~~--------------------~~v~~v~~~G~~v~~~~ 376 (376)
T 1o12_A 345 IAEGTRADLVLLDED--------------------LNVVMTIKEGEVVFRSR 376 (376)
T ss_dssp CSTTSBCCEEEECTT--------------------CCEEEEEETTEEEEEC-
T ss_pred CCCCCcCCEEEECCC--------------------CCEEEEEECCEEEeecC
Confidence 999999999999986 58999999999999875
No 63
>4ep8_C Urease subunit alpha; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1ef2_A* 4epb_C* 4epd_C* 4epe_C* 1ejx_C* 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1a5k_C 1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1a5m_C 1a5n_C 1ejr_C* 1a5l_C 1a5o_C 1fwa_C* ...
Probab=99.96 E-value=2.6e-28 Score=247.94 Aligned_cols=112 Identities=20% Similarity=0.218 Sum_probs=80.2
Q ss_pred cHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHH-HHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccc
Q 011766 327 PIKEMLHADICVSLGTDGAPSNNRMSIVDEMY-LASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGS 405 (478)
Q Consensus 327 ~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~ 405 (478)
....+++.|....+++|+.+............ ...........+........++|++++++++|.|||++||+++++|+
T Consensus 343 ~~~~l~~~G~~~~i~sD~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gls~~eal~~aTiNPAralGL~d~iGS 422 (566)
T 4ep8_C 343 AEDVLHDLGAFSLTSSDSQAMGRVGEVILRTWQVAHRMKVQRGALAEETGDNDNFRVKRYIAKYTINPALTHGIAHEVGS 422 (566)
T ss_dssp HHHHHHHHTSSCEECCCTTSSSCTTCHHHHHHHHHHHHHHHHCSCTTCCSSSCHHHHHHHHGGGTHHHHHHTTCTTTSSS
T ss_pred HHHHHHhCCCcceEeecccccccccccccccCCCCchHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHhCCCCCCcC
Confidence 34466788999999999977654433332111 11111111111111122445799999999999999999999999999
Q ss_pred cccCccccEEEEcCCCCCCCCcCChhhhhhhccCCCCeeEEEEccEEEEE
Q 011766 406 LEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMK 455 (478)
Q Consensus 406 l~~G~~ADlvv~d~~~~~~~~~~d~~~~~~~~~~~~~v~~v~v~G~~v~~ 455 (478)
|++||+|||||||++.+ ..++.+|+++|.+||-
T Consensus 423 IevGK~ADLVL~Dp~~f-----------------~vkP~~v~~~G~iv~a 455 (566)
T 4ep8_C 423 IEVGKLADLVVWSPAFF-----------------GVKPATVIKGGMIAIA 455 (566)
T ss_dssp SCTTSBCCEEEECGGGT-----------------TTSCSEEEETTEEEEE
T ss_pred CCCCCCCCEEEECcccc-----------------CCCeeEEeeCCEEEEc
Confidence 99999999999999744 2589999999999994
No 64
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=99.64 E-value=7.3e-15 Score=139.72 Aligned_cols=242 Identities=17% Similarity=0.122 Sum_probs=163.3
Q ss_pred CCchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceee---cC------CccCHH--------HHHHHHHHh--C
Q 011766 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFA---EA------GGQHVS--------EMAKAVELL--G 161 (478)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~---~~------~~~~~~--------~~~~~~~~~--g 161 (478)
.++.+|+....++..-..+.++.+..+...+.++++.|||++. ++ .+.... .+.+..+.. |
T Consensus 91 ~~L~~~l~~~~~~~~~~~t~ed~~~~a~~~l~e~~~~GV~y~E~r~dp~~~~~~~gl~~~~~~~a~~~~~~~a~~~~~~g 170 (371)
T 2pgf_A 91 KSLGEFVEKAIKVADIFHDYEVIEDLAKHAVFNKYKEGVVLMEFRYSPTFVAFKYNLDIELIHQAIVKGIKEVVELLDHK 170 (371)
T ss_dssp SCHHHHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHHTEEEEEEEECHHHHHTTTTCCHHHHHHHHHHHHHHHHHHTTTS
T ss_pred CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCEEEEEEECcccccccCCCCHHHHHHHHHHHHHHHHHHccCC
Confidence 4566777776666666678888888888899999999999972 21 111111 222233345 7
Q ss_pred CeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEeccccccCCHHHHHHHH
Q 011766 162 LRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETR 241 (478)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 241 (478)
++..+..+.... .+. +... +..+...+ . ....+ .+++.+.+.. ++.+..++
T Consensus 171 i~~~li~~~~r~---~~~--------~~~~------------~~~~~a~~-~--~~~vv--g~dl~g~e~~-~~~~~~~~ 221 (371)
T 2pgf_A 171 IHVALMCIGDTG---HEA--------ANIK------------ASADFCLK-H--KADFV--GFDHGGHEVD-LKEYKEIF 221 (371)
T ss_dssp SEEEEEEEEEES---STT--------CCHH------------HHHHHHHH-T--TTTEE--EEEEEESCCC-GGGGHHHH
T ss_pred CEEEEEEEecCC---CCH--------HHHH------------HHHHHHHh-C--CCCEE--EEecCCCccc-HHHHHHHH
Confidence 766544433321 111 0001 22222222 1 12222 2555555555 77889999
Q ss_pred HHHHHcCCceeEeccCChhhhHHHhhhcCCCCch-HHHHhhhCCCCCCeeeeeeccCChhH--HHHHHhcCCeEEECccc
Q 011766 242 DMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGT-VTFLDKIEFLQNNLLSAHTVWVNHTE--IGLLSRAGVKVSHCPAS 318 (478)
Q Consensus 242 ~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~i~h~~~~~~~~--~~~~~~~~~~~~~~p~~ 318 (478)
+.|++.|+++++|+.+.... .+ .........++.. .+.||.++++++ ++++++.++.+++||.+
T Consensus 222 ~~A~~~gl~~~~HagE~~~~------------~~~~~i~~al~~lg~~-ri~Hgv~l~~~~~l~~~l~~~~i~v~~cP~S 288 (371)
T 2pgf_A 222 DYVRESGVPLSVHAGEDVTL------------PNLNTLYSAIQVLKVE-RIGHGIRVAESQELIDMVKEKNILLEVCPIS 288 (371)
T ss_dssp HHHHHTTCCBEEEESCCTTS------------SSSHHHHHHHHTSCCS-EEEECGGGGGCHHHHHHHHHTTCEEEECHHH
T ss_pred HHHHHcCCcEEEeeCCCCCC------------CchHHHHHHHhccCCC-EEecchhccccHHHHHHHHHcCCeEEECcch
Confidence 99999999999999886310 01 2223334444444 589999997765 99999999999999999
Q ss_pred hhhcc-----CCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHH
Q 011766 319 AMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATING 393 (478)
Q Consensus 319 ~~~~~-----~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~p 393 (478)
|+... ...|+++++++|++|++|||.+...+ .+++.+++.+.... +++.+++ +.+|.|+
T Consensus 289 N~~l~~~~~~~~~pi~~ll~~Gv~V~lgTD~~~~~~-~~l~~e~~~a~~~~--------------~l~~~~l-~~lt~ns 352 (371)
T 2pgf_A 289 NVLLKNAKSMDTHPIRQLYDAGVKVSVNSDDPGMFL-TNINDDYEELYTHL--------------NFTLEDF-MKMNEWA 352 (371)
T ss_dssp HHHTTSSSCGGGCTHHHHHHTTCEEEECCBCHHHHT-CCHHHHHHHHHHHH--------------CCCHHHH-HHHHHHH
T ss_pred hHHhCCCCccccChHHHHHHCCCeEEEeCCCCcccC-CCHHHHHHHHHHHh--------------CCCHHHH-HHHHHHH
Confidence 98763 23699999999999999999865433 58999998776542 4899996 8889999
Q ss_pred HHHcCCC
Q 011766 394 AKSVLWD 400 (478)
Q Consensus 394 A~~lgl~ 400 (478)
++...++
T Consensus 353 ~~asf~~ 359 (371)
T 2pgf_A 353 LEKSFMD 359 (371)
T ss_dssp HHHCCSC
T ss_pred HHHHcCC
Confidence 9999885
No 65
>3ggm_A Uncharacterized protein BT9727_2919; bacillus cereus group., structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus thuringiensis serovarkonkukian}
Probab=99.61 E-value=2e-15 Score=110.01 Aligned_cols=70 Identities=24% Similarity=0.378 Sum_probs=55.8
Q ss_pred cceeEEEecEEEeeCCCCceeecceEEEECCEEEEEcCChhhhhhhccCCCeEEeCCCCEEeecccccccccch
Q 011766 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (478)
Q Consensus 18 ~~~~~i~n~~I~t~d~~~~~~~~~~v~I~~G~I~~ig~~~~~~~~~~~~~~~viD~~G~~v~PGfID~H~H~~~ 91 (478)
+.+++|+|++|+++++. ...+++|+|+||+|++|++..+... ...+.++||++|++|+|||||+|+|+.+
T Consensus 3 ~~~~li~n~~i~~~~~~--~~~~~~i~I~~g~I~~ig~~~~~~~--~~~~~~viD~~g~~v~PG~ID~H~H~~~ 72 (81)
T 3ggm_A 3 VPDMILYNGKITTLDPS--QPEVSAIAITDGLITAVGGDELLNS--ATEKTKKIDLKRKRAIPGLNDSHIHVIR 72 (81)
T ss_dssp CCSEEEESSEEECSCTT--CSEESEEEEETTEEEEEESGGGGGG--CCTTCEEEECTTCEEEECCCCTTEEEEC
T ss_pred cCCEEEECCEEEeCCCC--CccccEEEEECCEEEEEeCchHhcc--cCCCCEEEECCCCEEeeCeEeeeeCCCC
Confidence 56789999999987643 2346799999999999998654321 1235689999999999999999999954
No 66
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}
Probab=99.60 E-value=1.4e-13 Score=129.53 Aligned_cols=161 Identities=11% Similarity=0.079 Sum_probs=98.4
Q ss_pred CHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHH-HHhhhC-CCCCCeeeeeeccCChhHHHHHHh-cC
Q 011766 233 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVT-FLDKIE-FLQNNLLSAHTVWVNHTEIGLLSR-AG 309 (478)
Q Consensus 233 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~-~~~~~~~i~h~~~~~~~~~~~~~~-~~ 309 (478)
+.+.+.++++.+++.|.++.+|+.+....... ....+. .+.... ..+.+..+.|.+ +.+.++.+++ ..
T Consensus 134 ~~~~l~~~l~~~~~~g~~v~vHaEd~~~i~~~-------E~~ai~r~~~la~~~~g~~lhi~HvS--t~~~v~~I~~A~~ 204 (359)
T 3pnu_A 134 DIEYLKPTLEAMSDLNIPLLVHGETNDFVMDR-------ESNFAKIYEKLAKHFPRLKIVMEHIT--TKTLCELLKDYEN 204 (359)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECCCCSSCGGGT-------TGGGHHHHHHHHHHCTTSCEEECSCC--SHHHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHHcCCEEEEecCCchHhHHH-------HHHHHHHHHHHHHHcCCCcEEEEecC--cHHHHHHHHhcCC
Confidence 67889999999999999999999765421110 001121 122222 235566666666 4566776666 47
Q ss_pred CeEEECccchhhc-------------cCCCc---------HHHHHHCCCcE-EEcCCCCCCCCCc----------C-HHH
Q 011766 310 VKVSHCPASAMRM-------------LGFAP---------IKEMLHADICV-SLGTDGAPSNNRM----------S-IVD 355 (478)
Q Consensus 310 ~~~~~~p~~~~~~-------------~~~~~---------~~~~~~~gv~v-~~gsD~~~~~~~~----------~-~~~ 355 (478)
+.+.+||.+.... .-.+| +.+.+..|... +++||+.|+.... . ...
T Consensus 205 VtaEv~phhL~lt~~~~~~~~~~~~~k~~PPLR~~~dr~aL~~al~dG~id~~iaTDHaPh~~~eK~~~~g~~Gi~~~~~ 284 (359)
T 3pnu_A 205 LYATITLHHLIITLDDVIGGKMNPHLFCKPIAKRYEDKEALCELAFSGYEKVMFGSDSAPHPKDTKECCGCAAGVFSAPV 284 (359)
T ss_dssp EEEEECSGGGTCCHHHHHTSSCCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCBC------CCCSCBCCGGG
T ss_pred ceEEEechhhEEcHHHhcCcCCCCceEEcCCCCCHHHHHHHHHHHhcCCCCEEEecCCCCCCHHHhCCCCCCCChhhHHH
Confidence 7889999853210 11233 33567789777 8999998763211 0 000
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccccEEEEcCCCC
Q 011766 356 EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSW 422 (478)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~ 422 (478)
.+........ ++++++++++.+|.|||+++||..++ | |||+||| .++
T Consensus 285 ~L~l~~~~~~------------~~~~l~~lv~~~s~nPAki~gL~~~~-----G--Adlvl~d-~~~ 331 (359)
T 3pnu_A 285 ILPVLAELFK------------QNSSEENLQKFLSDNTCKIYDLKFKE-----D--KILTLEE-KEW 331 (359)
T ss_dssp HHHHHHHHHH------------HHSCHHHHHHHHTHHHHHHHTCCCSS-----C--CEEEEEC-CCE
T ss_pred HHHHHHHHHh------------hcCCHHHHHHHHHHhHHHHhCCCCCC-----C--CeEEEEe-cCE
Confidence 0001110000 12689999999999999999996443 4 9999999 433
No 67
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=99.48 E-value=8.8e-13 Score=122.22 Aligned_cols=240 Identities=17% Similarity=0.130 Sum_probs=151.0
Q ss_pred CchHHhhhccccccCCCChHHHHHHHHHHHHHHHhcCcceeecC--------CccCHHH--------HHHHHHHhCCeEE
Q 011766 102 DLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA--------GGQHVSE--------MAKAVELLGLRAC 165 (478)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~--------~~~~~~~--------~~~~~~~~g~~~~ 165 (478)
++.+++..+.+...-..+.++.+..++....++.+.||+.+--. .+..... ..+.....|+...
T Consensus 55 ~l~~fl~~~~~~~~vl~t~ed~~~~a~~~~~~~~~dgV~y~Eir~~P~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~ 134 (326)
T 3pao_A 55 NLQEFLDLYYAGADVLRTEQDFYDLTWAYLQKCKAQNVVHVEPFFDPQTHTDRGIPFEVVLAGIRAALRDGEKLLGIRHG 134 (326)
T ss_dssp SHHHHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHTTEEEECCEECHHHHHTTTCCHHHHHHHHHHHHHHHHHHHCCEEC
T ss_pred CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCeEEEEEEChHHhccCCCCHHHHHHHHHHHHHHHHhhCceEEE
Confidence 44555655555444445666767777778899999999986221 1112221 1222334565443
Q ss_pred EecccccCCCCCCCcccccCCcccCCCCCCccccccchhHHHHHHHhcCCCCCCeEEEEecccc-ccCCHHHHHHHHHHH
Q 011766 166 LVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVSSSQKELYAKHHHAADGRIRIWFGIRQI-MNATDRLLLETRDMA 244 (478)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~a 244 (478)
+-.+.... .++ +... +..+...++.. ..+. ++..+. ...+++.+..+++.|
T Consensus 135 lI~~~~R~---~~~--------~~a~------------~~~~~a~~~~~---~vvG--~dL~g~E~~~~~~~~~~~~~~A 186 (326)
T 3pao_A 135 LILSFLRH---LSE--------EQAQ------------KTLDQALPFRD---AFIA--VGLDSSEVGHPPSKFQRVFDRA 186 (326)
T ss_dssp CEEEEETT---SCH--------HHHH------------HHHHHHGGGGG---GCSE--EEEESCCTTCCGGGGHHHHHHH
T ss_pred EEEEeCCC---CCH--------HHHH------------HHHHHHhhccc---ccee--eCCCCCCCCCCHHHHHHHHHHH
Confidence 32222210 110 0000 22222223322 2222 222222 234567788999999
Q ss_pred HHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCC--hhHHHHHHhcCCeEEECccchhhc
Q 011766 245 REFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRM 322 (478)
Q Consensus 245 ~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~ 322 (478)
++.|+++++|+.+.... ..+.+....++.. .+.||.++. ++.++++++.++.+++||.+|+..
T Consensus 187 ~~~gl~~~~HagE~~~~--------------~~i~~al~~lg~~-rigHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~l 251 (326)
T 3pao_A 187 RSEGFLTVAHAGEEGPP--------------EYIWEALDLLKVE-RIDHGVRAFEDERLMRRLIDEQIPLTVCPLSNTKL 251 (326)
T ss_dssp HHTTCEECEEESSSSCH--------------HHHHHHHHTTCCS-SEEECGGGGGCHHHHHHHHHHTCCEEECHHHHHHT
T ss_pred HHcCCceeeecCCCCCH--------------HHHHHHHhcCCCc-eeeeeeeecccHHHHHHHHHcCCeEEECchhHHHh
Confidence 99999999999886432 1122223223332 379999998 679999999999999999999877
Q ss_pred c-----CCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 011766 323 L-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 397 (478)
Q Consensus 323 ~-----~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~l 397 (478)
. +..|+++|+++|++++++||.+...++ ++..+++.+.... +++.++ ++.++.|+++..
T Consensus 252 ~~~~~~~~hPi~~ll~~Gv~V~l~TDdp~~~~~-~l~~e~~~a~~~~--------------~l~~~~-l~~l~~nsi~~s 315 (326)
T 3pao_A 252 CVFDDMSQHTILDMLERGVKVTVNSDDPAYFGG-YVTENFHALQQSL--------------GMTEEQ-ARRLAQNSLDAR 315 (326)
T ss_dssp TSSSSGGGCCHHHHHHHTCCEEECCBSHHHHTC-CHHHHHHHHHHHH--------------CCCHHH-HHHHHHHHHHTC
T ss_pred CCCCCcccChHHHHHHCCCeEEEeCCCcccCCC-CHHHHHHHHHHHc--------------CCCHHH-HHHHHHHHHHHH
Confidence 3 457999999999999999998655444 8888888776542 489999 578889999987
Q ss_pred CCC
Q 011766 398 LWD 400 (478)
Q Consensus 398 gl~ 400 (478)
.++
T Consensus 316 f~~ 318 (326)
T 3pao_A 316 LVK 318 (326)
T ss_dssp C--
T ss_pred Hhc
Confidence 764
No 68
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=99.47 E-value=5.5e-12 Score=117.62 Aligned_cols=139 Identities=15% Similarity=0.129 Sum_probs=109.5
Q ss_pred cCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCC--hhHHHHHHhc
Q 011766 231 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRA 308 (478)
Q Consensus 231 ~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~--~~~~~~~~~~ 308 (478)
..+++.+..+++.|++.|+++++|+.+.... ..+.+....++.. .+.||.++. ++.++++++.
T Consensus 176 ~~~~~~~~~~~~~A~~~gl~~~~HagE~~~~--------------~~i~~al~~lg~~-rIgHgv~l~~d~~l~~~l~~~ 240 (343)
T 3rys_A 176 GNPPSKFERLYQRAAEAGLRRIAHAGEEGPA--------------SYITEALDVLHVE-RIDHGIRCMEDTDVVQRLVAE 240 (343)
T ss_dssp TCCGGGGHHHHHHHHHTTCEEEEEESSSSCH--------------HHHHHHHHTSCCS-EEEECGGGGGCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCeEEEeeCCCCCH--------------HHHHHHHhcCCcc-eeeeeeeecCChHHHHHHHhc
Confidence 4466778899999999999999999886432 1222333333332 489999986 5899999999
Q ss_pred CCeEEECccchhhcc-----CCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHH
Q 011766 309 GVKVSHCPASAMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAE 383 (478)
Q Consensus 309 ~~~~~~~p~~~~~~~-----~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~ 383 (478)
++.+++||.+|.... ...|+++|+++|++++++||.+...++ ++..+++.+.... +++.+
T Consensus 241 ~i~le~cP~SN~~l~~~~~~~~hPi~~ll~~Gv~V~l~TDdp~~~~~-~l~~E~~~a~~~~--------------~l~~~ 305 (343)
T 3rys_A 241 QVPLTVCPLSNVRLRAVDKLADHPLPEMLAIGLNVCVNSDDPAYFGG-YVDDNFEQLVKVL--------------EFSVP 305 (343)
T ss_dssp TCCEEECHHHHHHTTSSSCGGGCSHHHHHHTTCCEEECCBSTTTTTC-CHHHHHHHHHHHH--------------CCCHH
T ss_pred CCCeeEchhHHHHhCCCCCcccchHHHHHHCCCeEEEeCCCccccCC-CHHHHHHHHHHHc--------------CCCHH
Confidence 999999999998773 246999999999999999998776555 8999988776542 48999
Q ss_pred HHHHHHhHHHHHHcCCC
Q 011766 384 TVLRMATINGAKSVLWD 400 (478)
Q Consensus 384 ~al~~~T~~pA~~lgl~ 400 (478)
+ ++.++.|+++...++
T Consensus 306 ~-l~~l~~nsi~~sf~~ 321 (343)
T 3rys_A 306 E-QATLAANSIRSSFAS 321 (343)
T ss_dssp H-HHHHHHHHHHHSSSC
T ss_pred H-HHHHHHHHHHHHCCC
Confidence 8 577789999998874
No 69
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*
Probab=99.44 E-value=4.5e-12 Score=119.94 Aligned_cols=157 Identities=9% Similarity=0.099 Sum_probs=88.6
Q ss_pred CCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHh-hhcCCCCchHHHH--hhhCCCCCCeeeeeeccCChhHHHHHHhc
Q 011766 232 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM-DTRKVDHGTVTFL--DKIEFLQNNLLSAHTVWVNHTEIGLLSRA 308 (478)
Q Consensus 232 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~-~~~~~~~~~~~~l--~~~~~~~~~~~i~h~~~~~~~~~~~~~~~ 308 (478)
.+.+.+.++++.+++.+.++.+|+.+......... +... ....+ ......+.+..+.|.. +.+.++.+++.
T Consensus 117 ~~~~~l~~~~~~~~~~~~~v~vH~ed~~~~~~~~~~E~~~----~~~~i~~~la~~~~~~~hi~Hvs--t~~~~~~i~~a 190 (347)
T 2z26_A 117 TSVDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARF----IESVMEPLRQRLTALKVVFEHIT--TKDAADYVRDG 190 (347)
T ss_dssp SCGGGGHHHHHHHHHHTCCEEECCCCCCTTSCGGGHHHHH----HHHTHHHHHHHSTTCCEEECSCC--SHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHHHhCCEEEEEecCCccccCHHHHHHHH----HHHHHHHHHHhhcCCcEEEEECC--cHHHHHHHHHh
Confidence 35677888999999999999999975431100000 0000 00111 1122334555555554 35666666654
Q ss_pred --CCeEEECccchhh-------------ccCCCc---------HHHHHHCCCcE-EEcCCCCCCCCC----------c-C
Q 011766 309 --GVKVSHCPASAMR-------------MLGFAP---------IKEMLHADICV-SLGTDGAPSNNR----------M-S 352 (478)
Q Consensus 309 --~~~~~~~p~~~~~-------------~~~~~~---------~~~~~~~gv~v-~~gsD~~~~~~~----------~-~ 352 (478)
++.+.+||..... ..-.+| +.+.+..|... +++||+.|+... . .
T Consensus 191 k~~Vt~e~~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~~l~~G~id~~i~SDhaP~~~~~K~~~~g~~Gi~~ 270 (347)
T 2z26_A 191 NERLAATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFN 270 (347)
T ss_dssp CTTEEEEECHHHHHCCHHHHHTTSBCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCCHHHHSSSSBCCCCCC
T ss_pred CCCceEeecchHheecHHHhcCcCCCccEEEeCCCCCHHHHHHHHHHHhcCCCCeEEecCCCCCCHHHhcCCCCCCCcCc
Confidence 4677888875321 011222 34566778776 899999765310 1 0
Q ss_pred HHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcccc
Q 011766 353 IVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSL 406 (478)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l 406 (478)
....+...+.... .++|++++++++|.|||+++|+.+++|+|
T Consensus 271 ~e~~l~l~~~~~~------------~~~sl~~~v~~~s~nPAki~gl~~~kG~i 312 (347)
T 2z26_A 271 APTALGSYATVFE------------EMNALQHFEAFCSVNGPQFYGLPVNDTFI 312 (347)
T ss_dssp TTTHHHHHHHHHH------------HTTCGGGHHHHHHTHHHHHHTCCCCCCEE
T ss_pred HHHHHHHHHHHhh------------cCCCHHHHHHHHhHhHHHHhCCCCCCCeE
Confidence 0001111110000 14799999999999999999996557875
No 70
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=99.26 E-value=8e-10 Score=103.83 Aligned_cols=135 Identities=14% Similarity=0.116 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCC--hhHHHHHHhcCCeE
Q 011766 235 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKV 312 (478)
Q Consensus 235 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~--~~~~~~~~~~~~~~ 312 (478)
+....+++.|++.|+++++|+.+..... ...+....++.. .|.|+.++. ++.++++++.++.+
T Consensus 192 ~~f~~~f~~A~~~gl~~~~HagE~~~~~--------------~i~~al~~lg~~-RIgHgv~l~~d~~l~~~l~~~~i~l 256 (367)
T 3iar_A 192 PGHVQAYQEAVKSGIHRTVHAGEVGSAE--------------VVKEAVDILKTE-RLGHGYHTLEDQALYNRLRQENMHF 256 (367)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESSSSCHH--------------HHHHHHHTSCCS-EEEECGGGGGCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHcCCeeEEecCCcCChH--------------HHHHHHHccCCc-eeeeeeeecCCHHHHHHHHhCCcEE
Confidence 5778889999999999999998865421 122233233332 489999985 57999999999999
Q ss_pred EECccchhhcc-----CCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHH
Q 011766 313 SHCPASAMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLR 387 (478)
Q Consensus 313 ~~~p~~~~~~~-----~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~ 387 (478)
++||.+|.... ...|++.|+++|++|+++||.+...+ .++..++..+.... +++.++ +.
T Consensus 257 e~cP~SN~~l~~~~~~~~hPi~~ll~~Gv~v~l~TDdp~~~~-~~l~~e~~~a~~~~--------------glt~~e-l~ 320 (367)
T 3iar_A 257 EICPWSSYLTGAWKPDTEHAVIRLKNDQANYSLNTDDPLIFK-STLDTDYQMTKRDM--------------GFTEEE-FK 320 (367)
T ss_dssp EECHHHHHHTSSSCTTSCCHHHHHHHTTCCEEECCBSHHHHT-CCHHHHHHHHHHHH--------------CCCHHH-HH
T ss_pred EECHHHHHHhCCCCCcccChHHHHHHCCCEEEECCCCccccC-CCHHHHHHHHHHHc--------------CCCHHH-HH
Confidence 99999998773 35799999999999999999865432 45778877665432 589998 77
Q ss_pred HHhHHHHHHcCCC
Q 011766 388 MATINGAKSVLWD 400 (478)
Q Consensus 388 ~~T~~pA~~lgl~ 400 (478)
.+|.|+++...++
T Consensus 321 ~l~~nsi~~sf~~ 333 (367)
T 3iar_A 321 RLNINAAKSSFLP 333 (367)
T ss_dssp HHHHHHHHTSSSC
T ss_pred HHHHHHHHHhCCC
Confidence 7789999988774
No 71
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=99.12 E-value=4.4e-09 Score=98.49 Aligned_cols=142 Identities=15% Similarity=0.119 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHcCCceeEeccC--ChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeec-cCChhHHHHHHhcCCeE
Q 011766 236 LLLETRDMAREFKTGIHMHVAE--IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV-WVNHTEIGLLSRAGVKV 312 (478)
Q Consensus 236 ~l~~~~~~a~~~~~~v~~H~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~-~~~~~~~~~~~~~~~~~ 312 (478)
.+.+.+++|++.|++|.+|... .... + ..+++...+....+..+.||. ..+.+...++.+.|..+
T Consensus 149 ~f~~q~~lA~~~glPv~iH~~~~~r~a~-e-----------~l~iL~~~g~~~~~~~i~H~f~~~~~e~a~~~~~~G~~i 216 (330)
T 2ob3_A 149 VLKAAARASLATGVPVTTHTAASQRDGE-Q-----------QAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLI 216 (330)
T ss_dssp HHHHHHHHHHHHCCCEEEECCGGGTHHH-H-----------HHHHHHHTTCCGGGEEECSGGGCCCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHhCCeEEEECCCCCCCHH-H-----------HHHHHHHcCcCcccEEEeCCCCCCCHHHHHHHHhCCCEE
Confidence 3777789999999999999952 2221 1 234455544322345689998 57888999999999998
Q ss_pred EEC--ccchh--------------hc--cCCCcHHHHHHCC--CcEEEcCCCCCCCCCc-CHHHHH-------HH----H
Q 011766 313 SHC--PASAM--------------RM--LGFAPIKEMLHAD--ICVSLGTDGAPSNNRM-SIVDEM-------YL----A 360 (478)
Q Consensus 313 ~~~--p~~~~--------------~~--~~~~~~~~~~~~g--v~v~~gsD~~~~~~~~-~~~~~~-------~~----~ 360 (478)
.+. ....+ .. .....++++++.+ -.+.+.||.+....+. ...... .. .
T Consensus 217 ~~~~~G~~tf~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~drilleTD~p~~l~~~~~~~g~~~~~n~pn~~~~~~~ 296 (330)
T 2ob3_A 217 GLDHIPYSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWTFGFSSYVTNIMDVMDRVNPDGMAFIPL 296 (330)
T ss_dssp EECCTTCCCTTCTTCHHHHHHHCSSCHHHHHHHHHHHHHTTCGGGEEECCCCCSEECSSSTTHHHHHHHHCTTGGGHHHH
T ss_pred EeCCCccccccccccccccccccCCCHHHHHHHHHHHHHhCCCCeEEEeCCCCCCcccccccCCCcccccCCCCcchHHH
Confidence 877 22111 00 1112367888888 7899999986311111 000000 00 0
Q ss_pred HHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 011766 361 SLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 398 (478)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lg 398 (478)
..... . .+.|+|++++.++.|.||+++|+
T Consensus 297 ~~ia~-----l----~~~G~~~eev~~~~t~N~~rlf~ 325 (330)
T 2ob3_A 297 RVIPF-----L----REKGVPQETLAGITVTNPARFLS 325 (330)
T ss_dssp THHHH-----H----HHTTCCHHHHHHHHTHHHHHHHS
T ss_pred HHHHH-----H----HHcCCCHHHHHHHHHHHHHHHhc
Confidence 00000 0 01269999999999999999997
No 72
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=99.04 E-value=3.8e-08 Score=91.86 Aligned_cols=232 Identities=11% Similarity=0.009 Sum_probs=124.3
Q ss_pred HHHHHHHHHhcCcceeecCCcc----CHHHHHHHHHHhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccc
Q 011766 127 TLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVS 202 (478)
Q Consensus 127 ~~~~~~~~l~~GvTtv~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (478)
......++.++|||++++.+.. ......+.++..|++.+....+.... ....+. ......
T Consensus 49 ~~~~l~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~hp~~--~~~~~~---~~~~~~----------- 112 (314)
T 2vc7_A 49 AVNEVKRAMQFGVKTIVDPTVMGLGRDIRFMEKVVKATGINLVAGTGIYIYI--DLPFYF---LNRSID----------- 112 (314)
T ss_dssp HHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECEEBCCSS--CCCGGG---TTCCHH-----------
T ss_pred HHHHHHHHHHcCCCEEEecCCCCCCcCHHHHHHHHHHcCCeEEEEeecCCCC--CCchhh---hccCHH-----------
Confidence 3334567889999999987633 24455556666776655432222110 000000 001111
Q ss_pred hhHHHHHHHh--cCCC-----CCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccC-ChhhhHHHhhhcCCCCc
Q 011766 203 SSQKELYAKH--HHAA-----DGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE-IPYENQVVMDTRKVDHG 274 (478)
Q Consensus 203 ~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~-~~~~~~~~~~~~~~~~~ 274 (478)
+..+.+++. ...+ .+.++..+..........+.+.+.+++|++.|+++.+|+.+ .....+
T Consensus 113 -~l~~~~~~~~~~gige~G~~~g~i~~~ld~~~~~~~q~~~~~~~~~lA~~~~~pv~iH~~~~~~~~~~----------- 180 (314)
T 2vc7_A 113 -EIADLFIHDIKEGIQGTLNKAGFVKIAADEPGITKDVEKVIRAAAIANKETKVPIITHSNAHNNTGLE----------- 180 (314)
T ss_dssp -HHHHHHHHHHHTCSSSSSCCCCSEEEECCTTCSCHHHHHHHHHHHHHHHHHCCCEEEECCTTTTHHHH-----------
T ss_pred -HHHHHHHHHHHhhcccCCCCCCeEEEeecCCCCCHHHHHHHHHHHHHHHHHCCEEEEeCCCcccChHH-----------
Confidence 333333321 1111 12233333333222222345777889999999999999962 111111
Q ss_pred hHHHHhhhCCCCCCeeeeeecc-CChhHHHHHHhcCCeEEECccch--h-h-ccCCCcHHHHHHC--CCcEEEcCCCCCC
Q 011766 275 TVTFLDKIEFLQNNLLSAHTVW-VNHTEIGLLSRAGVKVSHCPASA--M-R-MLGFAPIKEMLHA--DICVSLGTDGAPS 347 (478)
Q Consensus 275 ~~~~l~~~~~~~~~~~i~h~~~-~~~~~~~~~~~~~~~~~~~p~~~--~-~-~~~~~~~~~~~~~--gv~v~~gsD~~~~ 347 (478)
..+.+...+....+.++.|+.. .+.+.+..+.+.|..+.++.... + . ......+.++++. .-++.++||++..
T Consensus 181 ~~~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~i~~~~~~g~~drilleTD~~~~ 260 (314)
T 2vc7_A 181 QQRILTEEGVDPGKILIGHLGDTDNIDYIKKIADKGSFIGLDRYGLDLFLPVDKRNETTLRLIKDGYSDKIMISHDYCCT 260 (314)
T ss_dssp HHHHHHHTTCCGGGEEETTGGGCCCHHHHHHHHHTTCEEEECCTTCTTTSCHHHHHHHHHHHHHTTCTTTEEECCCCBSS
T ss_pred HHHHHHHcCCCcccEEEECCCCCCCHHHHHHHHHcCCEEEEeCCCcccCCCHHHHHHHHHHHHHcCCCCeEEEcCCcccc
Confidence 3345555554444667899986 46888999999999888773111 0 0 0112234556665 4678999998521
Q ss_pred C------CCcCHH--------HHHH-HHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 011766 348 N------NRMSIV--------DEMY-LASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 398 (478)
Q Consensus 348 ~------~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lg 398 (478)
. ..+... .-+. ....+. ..++|.+++.+..|.||+++|+
T Consensus 261 ~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~l~------------~~g~~~e~~~~~~~~N~~rlf~ 314 (314)
T 2vc7_A 261 IDWGTAKPEYKPKLAPRWSITLIFEDTIPFLK------------RNGVNEEVIATIFKENPKKFFS 314 (314)
T ss_dssp BCCGGGCTTSHHHHCTTCSTTHHHHTHHHHHH------------HTTCCHHHHHHHHTHHHHHHTC
T ss_pred ccccccchhhhhcCCCCcCHHHHHHHHHHHHH------------HcCCCHHHHHHHHHHCHHHHhC
Confidence 0 000000 0000 000010 1259999999999999999885
No 73
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=99.00 E-value=2.4e-08 Score=92.17 Aligned_cols=139 Identities=12% Similarity=0.027 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeecc-CChhHHHHHHhcCCeEE
Q 011766 235 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW-VNHTEIGLLSRAGVKVS 313 (478)
Q Consensus 235 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~-~~~~~~~~~~~~~~~~~ 313 (478)
+.+.+.+++|++.|++|.+|+....... ...+.+...+....+.++.|+.. .+.+.+..+.+.|..+.
T Consensus 138 ~~~~~~~~~a~~~~~pv~iH~~~~~~~~-----------~~~~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~i~ 206 (291)
T 1bf6_A 138 KVFIAAALAHNQTGRPISTHTSFSTMGL-----------EQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQ 206 (291)
T ss_dssp HHHHHHHHHHHHHCCCEEEECGGGCSHH-----------HHHHHHHHTTCCGGGEEECCCCSSCCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHCCeEEEeCCCCCChH-----------HHHHHHHHcCCCchhEEEECCCCCCCHHHHHHHHHCCCEEE
Confidence 4577889999999999999995321100 13344555444444668899965 57788888999998887
Q ss_pred ECccchh---h-ccCCCcHHHHHHCC--CcEEEcCCCCCCC-------CCcCHH-HHHHHHHHHhcccccccCCCCCCCC
Q 011766 314 HCPASAM---R-MLGFAPIKEMLHAD--ICVSLGTDGAPSN-------NRMSIV-DEMYLASLINKGREVFANGTTDPAA 379 (478)
Q Consensus 314 ~~p~~~~---~-~~~~~~~~~~~~~g--v~v~~gsD~~~~~-------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (478)
+...... . ......++++++.+ -++.++||++... +..... ... ...+. ..+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dril~~TD~p~~~~~~~~~~~~~~~~~~~~-~~~l~-------------~~g 272 (291)
T 1bf6_A 207 FDTIGKNSYYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTF-IPQLR-------------QSG 272 (291)
T ss_dssp ECCTTCTTTSCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCCTTHHHHTH-HHHHH-------------HTT
T ss_pred EccCcccCCCCHHHHHHHHHHHHHhCCCCeEEEcCCCCCCccchhcCCCCHHHHHHHH-HHHHH-------------HcC
Confidence 7532100 0 01123466788887 6789999986320 001111 111 01111 125
Q ss_pred CCHHHHHHHHhHHHHHHcC
Q 011766 380 LPAETVLRMATINGAKSVL 398 (478)
Q Consensus 380 ls~~~al~~~T~~pA~~lg 398 (478)
+|.+++.+..|.||+++|+
T Consensus 273 ~~~~~~~~~~~~N~~rl~~ 291 (291)
T 1bf6_A 273 FSQADVDVMLRENPSQFFQ 291 (291)
T ss_dssp CCHHHHHHHHTHHHHHHCC
T ss_pred CCHHHHHHHHHHhHHHHhC
Confidence 9999999999999999885
No 74
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=98.84 E-value=3.8e-07 Score=85.33 Aligned_cols=241 Identities=13% Similarity=0.105 Sum_probs=138.5
Q ss_pred HHHHHHHHHHHHHHHhcCcceeecCC----ccCHHHHHHHHHHhCCeEEEecccccCCCCCCCcccccCC-cccCCCCCC
Q 011766 121 EDSYISTLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTT-DDCIQPDSS 195 (478)
Q Consensus 121 ~~~~~~~~~~~~~~l~~GvTtv~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 195 (478)
++.........+.+.+.|+.|++|.- +..+..+.+..+..|++...+..++......+..+..... ....+
T Consensus 79 ~~~~~~~~~~l~~~k~~Gg~tIVd~T~~g~GRd~~~l~~is~~tGv~IV~~TG~y~~~~~~p~~~~~~~~~~~~~e---- 154 (360)
T 3tn4_A 79 DESLRVAVEAAEKMKRHGIQTVVDPTPNDCGRNPAFLRRVAEETGLNIICATGYYYEGEGAPPYFQFRRLLGTAED---- 154 (360)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECCCTTTTCCHHHHHHHHHHHCCEEEEEECCCCGGGSCTHHHHHHHHHTCHHH----
T ss_pred hhHHHHHHHHHHHHHhcCCCeEEECCCCCcCcCHHHHHHHHHHcCCCEEEeCccccCcccCCcccchhhhcccCHH----
Confidence 33344444556678899999999853 3557777888899999998776544332211111111000 00000
Q ss_pred ccccccchhHHHH-HHHhcCC------CCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhh
Q 011766 196 ISFNFVSSSQKEL-YAKHHHA------ADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 268 (478)
Q Consensus 196 ~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~ 268 (478)
+..++ +++.... ..+.++.......+.....+.+++.++++++.|++|.+|........+
T Consensus 155 --------~l~~~~i~Ei~~Gi~~tgikaG~I~~~~~~~~~t~~E~k~frA~a~aa~etG~Pv~iHt~~~~~~~e----- 221 (360)
T 3tn4_A 155 --------DIYDMFMAELTEGIADTGIKAGVIKLASSKGRITEYEKMFFRAAARAQKETGAVIITHTQEGTMGPE----- 221 (360)
T ss_dssp --------HHHHHHHHHHHTCSTTSCCCCSEEEEECBTTBCCHHHHHHHHHHHHHHHHHCCEEEEECSTTCCHHH-----
T ss_pred --------HHHHHHHHHHHhccccCCCcceEEEEEccCCCCCHHHHHHHHHHHHHHHHhCCcEEEEcCcccCCHH-----
Confidence 22222 2222221 123344333222332333456888889999999999999976433211
Q ss_pred cCCCCchHHHHhhhCCCCCCeeeee-eccCChhHHHHHHhcCCeEEECccc-----hhh--ccCCCcHHHHHHCC--CcE
Q 011766 269 RKVDHGTVTFLDKIEFLQNNLLSAH-TVWVNHTEIGLLSRAGVKVSHCPAS-----AMR--MLGFAPIKEMLHAD--ICV 338 (478)
Q Consensus 269 ~~~~~~~~~~l~~~~~~~~~~~i~h-~~~~~~~~~~~~~~~~~~~~~~p~~-----~~~--~~~~~~~~~~~~~g--v~v 338 (478)
.+..+.+.+.-..+.++.| |...+.+..+++.+.|..+.+.-.. .+. ......++++++.| -++
T Consensus 222 ------~l~iL~eeG~~~~~vvi~H~~~~~d~~~~~~~l~~G~yl~fD~iG~~~~~~~p~d~~r~~~l~~lv~~g~~drI 295 (360)
T 3tn4_A 222 ------QAAYLLEHGADPKKIVIGHMCDNTDPDYHRKTLAYGVYIAFDRFGIQGMVGAPTDEERVRTLLALLRDGYEKQI 295 (360)
T ss_dssp ------HHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEECCTTCCCSTTCCCHHHHHHHHHHHHHTTCGGGE
T ss_pred ------HHHHHHHcCCCCCceEEEcCCCCCCHHHHHHHHHcCCEEEEcccccccccCCCChHHHHHHHHHHHHhcCcceE
Confidence 2345566666667889999 6777788889999999988764210 000 01224567888887 479
Q ss_pred EEcCCCC------CCC-----------CCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 011766 339 SLGTDGA------PSN-----------NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 397 (478)
Q Consensus 339 ~~gsD~~------~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~l 397 (478)
.+++|.+ +.. +.....-.-..+.+. +.|+|.+++-++.+.||+++|
T Consensus 296 LLstDa~~~~~~~py~~p~p~r~~~~~~~y~~i~~~~ip~L~-------------~~Gvs~e~I~~i~~~NP~rlf 358 (360)
T 3tn4_A 296 MLSHDTVNVWLGRPFTLPEPFAEMMKNWHVEHLFVNIIPALK-------------NEGIRDEVLEQMFIGNPAALF 358 (360)
T ss_dssp EECCCCEEEESSSCCCCCHHHHHHTTTCSTTHHHHTHHHHHH-------------HTTCCHHHHHHHHTHHHHHHH
T ss_pred EEecCCCcccccCCCCCcccccccCCCCCchhHHHHHHHHHH-------------HcCCCHHHHHHHHHHhHHHHh
Confidence 9999962 110 001111000011111 237999999999999999987
No 75
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=98.82 E-value=4.2e-07 Score=85.24 Aligned_cols=259 Identities=13% Similarity=0.052 Sum_probs=144.6
Q ss_pred HHHHHHHHhcCcceeecCC----ccCHHHHHHHHHHh---CCeEEEecccccCCCCC-CCcccccCCcccCCCCCCcccc
Q 011766 128 LLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELL---GLRACLVQSTMDCGEGL-PASWAVRTTDDCIQPDSSISFN 199 (478)
Q Consensus 128 ~~~~~~~l~~GvTtv~~~~----~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 199 (478)
.....++.+.|++++++.- +.....+.+..+.. |++.+.+..++...... .+.|....+. +
T Consensus 52 ~~el~~~~~~G~~tiVd~t~~~~GRd~~~l~~is~~t~~~Gv~Iv~~TG~y~~~~~~~~~~~~~~~~~---e-------- 120 (363)
T 3ovg_A 52 IKEFKEFIDRGGSTIVTMDPPNVGRDVLKTLEIANAVKNLGGNVIMSTGFHKAKFYDKYSSWLAVVPT---E-------- 120 (363)
T ss_dssp HHHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHGGGTCEEEEEEECCCGGGSCTTTSHHHHSCH---H--------
T ss_pred HHHHHHHHHhCCCeEEEeCCCccCCCHHHHHHHHHhcccCCcEEEEeCCCCcCcccccCcHhhhcCCH---H--------
Confidence 3344556789999999853 34455666666665 99998776554322110 0111111010 0
Q ss_pred ccchhHHHHHHHhcC-------------CCCCCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHh
Q 011766 200 FVSSSQKELYAKHHH-------------AADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 266 (478)
Q Consensus 200 ~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~ 266 (478)
.++....+.+..-.. ...+.+++.++...+.....+.+.+.+++|++.|++|.+|........+
T Consensus 121 ~l~~~~~~ei~~Gi~~~~~~gp~~~~t~ikaG~ikig~s~~~~t~~Q~~~f~aq~~~A~e~glPViiH~r~gr~a~d--- 197 (363)
T 3ovg_A 121 EIVKMCVAEIEEGMDEYNYNGPVVKRSKAKAGIIKAGTGYGAIDRLELKALEVAARTSILTGCPILVHTQLGTMALE--- 197 (363)
T ss_dssp HHHHHHHHHHHTCCBTTTTSSSCCCBCSCCCCEEEEEEEETBEEHHHHHHHHHHHHHHHHHCCCEEEEEETTCSHHH---
T ss_pred HHHHHHHHHHHhcccccccccccccCCCccCCEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCEEEEeCCCCCCHHH---
Confidence 111122222222111 1124456555544333333456777889999999999999864221111
Q ss_pred hhcCCCCchHHHHhhhCCCCCCeeeeeecc-CChhHHHHHH-hcCCeEEECccchhh--c--cCCCcHHHHHHCCC--cE
Q 011766 267 DTRKVDHGTVTFLDKIEFLQNNLLSAHTVW-VNHTEIGLLS-RAGVKVSHCPASAMR--M--LGFAPIKEMLHADI--CV 338 (478)
Q Consensus 267 ~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~-~~~~~~~~~~-~~~~~~~~~p~~~~~--~--~~~~~~~~~~~~gv--~v 338 (478)
..+++...+....+.++.|+.. -+.+....+. +.|..+.+.-..... . .....++++++.+. .+
T Consensus 198 --------~l~iL~e~g~~~~~vvi~H~~~~~~~~~a~~~l~~~G~yI~f~g~~~~~~~~~~~ra~~l~~lv~~~p~drI 269 (363)
T 3ovg_A 198 --------VAKHLIGFGANPDKIQISHLNKNPDKYYYEKVIKETGVTLCFDGPDRVKYYPDSLLAENIKYLVDKGLQKHI 269 (363)
T ss_dssp --------HHHHHHHHTCCGGGEEEECGGGSCCHHHHHHHHHHHCCEEEECCTTCTTTCCHHHHHHHHHHHHHTTCGGGE
T ss_pred --------HHHHHHhcCCCCCcEEEEcCCCCCCHHHHHHHHHHCCcEEEECCeeccccCChhHHHHHHHHHHHhcCCCeE
Confidence 3455665555445678889985 4566677777 889888876321100 0 11235677888774 79
Q ss_pred EEcCCCCCCCCCcCHHHHH------HHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCccc
Q 011766 339 SLGTDGAPSNNRMSIVDEM------YLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKA 412 (478)
Q Consensus 339 ~~gsD~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~A 412 (478)
.+.||++.. ..+.+.... ............ ....|+|.+++.++.|.||+++|++. ..+++.+|+.-
T Consensus 270 LleTDap~~-~~l~~~G~~~g~~~n~p~~l~~~~~~~-----a~~rGis~eei~~it~~Np~rlf~l~-~~~~~~~~~~~ 342 (363)
T 3ovg_A 270 TLSLDAGRI-LYQRNYGLTKGKQTFGLAYLFDRFLPL-----LKQVGVSKEAIFDILVNNPKRVLAFD-EKRNFDPLKVS 342 (363)
T ss_dssp EECCCCCSG-GGSHHHHHHTTEECCCTHHHHHTHHHH-----HHHHTCCHHHHHHHHTHHHHHHTSCC-CCCCCCGGGSC
T ss_pred EEeCCCCCC-cCCCCCCccCCCCCCCccHHHHHHHHH-----HHHcCCCHHHHHHHHHHHHHHHHCCC-CcCccCcccCC
Confidence 999998632 111111100 000000000000 01126999999999999999999995 56999999876
Q ss_pred cEE
Q 011766 413 DMV 415 (478)
Q Consensus 413 Dlv 415 (478)
+-|
T Consensus 343 ~~~ 345 (363)
T 3ovg_A 343 KEV 345 (363)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 76
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=98.77 E-value=2.8e-06 Score=79.99 Aligned_cols=233 Identities=9% Similarity=0.009 Sum_probs=131.5
Q ss_pred HHHHHHHHHHhcCcceeecCC----ccCHHHHHHHHHHhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCcccccc
Q 011766 126 STLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFV 201 (478)
Q Consensus 126 ~~~~~~~~~l~~GvTtv~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (478)
.......++..+|++++++.. +.....+.+..+..|+..+....+.... ..+.+... ...+
T Consensus 87 ~~~~~l~~~~~aGv~tiV~~t~~g~gr~~~~l~~la~~~gv~i~~~tG~y~~~--~~P~~~~~---~~~~---------- 151 (364)
T 3k2g_A 87 LAIAEVKQFAAVGGRSIVDPTCRGIGRDPVKLRRISAETGVQVVMGAGYYLAS--SMPETAAR---LSAD---------- 151 (364)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECCSBCCGG--GCCGGGGT---CCHH----------
T ss_pred HHHHHHHHHHhcCCCeEEEeCCCcccCCHHHHHHHHHHhCCcEEEEeCccCCC--CCchhhcc---CCHH----------
Confidence 334566778999999999975 3456666677778888776543332110 00111110 0111
Q ss_pred chhHHHHH-HHhcC------CCCCCeEEEEeccc-cccCCHHHHHHHHHHHHHcCCceeEeccCC-hhhhHHHhhhcCCC
Q 011766 202 SSSQKELY-AKHHH------AADGRIRIWFGIRQ-IMNATDRLLLETRDMAREFKTGIHMHVAEI-PYENQVVMDTRKVD 272 (478)
Q Consensus 202 ~~~~~~~~-~~~~~------~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~-~~~~~~~~~~~~~~ 272 (478)
+..+.+ ++... ...+.+.- ++... ....-.+.+.+.+++|++.|++|.+|..+. ....+
T Consensus 152 --~L~~~~~~ei~~Gi~~~~vkag~IGE-iGld~~~t~~q~~~f~aq~~~A~~~glPV~iH~~gr~~a~~e--------- 219 (364)
T 3k2g_A 152 --DIADEIVAEALEGTDGTDARIGLIGE-IGVSSDFTAEEEKSLRGAARAQVRTGLPLMVHLPGWFRLAHR--------- 219 (364)
T ss_dssp --HHHHHHHHHHHTCBTTBSCCCSSEEE-EECCTTCCHHHHHHHHHHHHHHHHHCCCEEEECCTTSCCHHH---------
T ss_pred --HHHHHHHHHHHhccccCCcceeEEEE-EEcCCCCCHHHHHHHHHHHHHHHHHCCeEEEecCCCCccHHH---------
Confidence 333332 22211 11122211 22222 111123357777889999999999998321 22111
Q ss_pred CchHHHHhhhCCCCCCeeeeeecc-C-ChhHHHHHHhcCCeEEECccch---hhc---------cCCCcHHHHHHCC--C
Q 011766 273 HGTVTFLDKIEFLQNNLLSAHTVW-V-NHTEIGLLSRAGVKVSHCPASA---MRM---------LGFAPIKEMLHAD--I 336 (478)
Q Consensus 273 ~~~~~~l~~~~~~~~~~~i~h~~~-~-~~~~~~~~~~~~~~~~~~p~~~---~~~---------~~~~~~~~~~~~g--v 336 (478)
...++...+....+.++.||.. - +.+...++.+.|..+.+.-... +.. .....++++++.| -
T Consensus 220 --~l~iL~e~g~~~~~vvi~H~~~s~~~~e~a~~~l~~G~~I~f~g~gt~~~f~~~~~~~~~d~~ra~~l~~lv~~gp~d 297 (364)
T 3k2g_A 220 --VLDLVEEEGADLRHTVLCHMNPSHMDPVYQATLAQRGAFLEFDMIGMDFFYADQGVQCPSDDEVARAILGLADHGYLD 297 (364)
T ss_dssp --HHHHHHHTTCCGGGEEECCCGGGTTCHHHHHHHHHHTCEEEECCTTCCCEETTTTEECCCHHHHHHHHHHHHHTTCGG
T ss_pred --HHHHHHHcCCCCCceEEECCCCCCCCHHHHHHHHhCCcEEEecCCcccccccccccccccHHHHHHHHHHHHHhCCcc
Confidence 2345555554444577789983 5 8888999999999887763211 100 1223567788888 4
Q ss_pred cEEEcCCCCCC-------CCCcCHH-HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 011766 337 CVSLGTDGAPS-------NNRMSIV-DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 401 (478)
Q Consensus 337 ~v~~gsD~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~ 401 (478)
.+.+.||.+.. .+..... ....... . ..|+|.+++.++.|.||+++|+++.
T Consensus 298 rilleTD~p~~~~~~~~gg~~~~~l~~~~~~~l-~-------------~~Gis~eei~~~~~~Np~rlf~l~~ 356 (364)
T 3k2g_A 298 RILLSHDVFVKMMLTRYGGNGYAFVTKHFLPRL-R-------------RHGLDDAALETLMVTNPRRVFDASI 356 (364)
T ss_dssp GEEECCCCCSGGGSGGGTSCTTSHHHHHHHHHH-H-------------HTTCCHHHHHHHHTHHHHHHHCTTS
T ss_pred cEEEeCCCCCCCCCCCCCCCCcchHHHHHHHHH-H-------------HcCCCHHHHHHHHHHHHHHHhCCCc
Confidence 79999998521 1111221 1111111 1 1269999999999999999999964
No 77
>2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1
Probab=98.69 E-value=2.4e-08 Score=100.40 Aligned_cols=128 Identities=19% Similarity=0.182 Sum_probs=96.6
Q ss_pred HHHHHH-cCC---ceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhH--HHHHHhcCCeEEE
Q 011766 241 RDMARE-FKT---GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE--IGLLSRAGVKVSH 314 (478)
Q Consensus 241 ~~~a~~-~~~---~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~--~~~~~~~~~~~~~ 314 (478)
+..+++ .|+ ++++|+.+...... ..+.+ ++.+. |+||.++.++. ++++++.++.+++
T Consensus 504 Ln~ar~~~Gl~~i~~t~HaGE~~~~e~-----------l~~al-----Lg~~R-IgHGv~l~edp~Li~lla~~~I~vev 566 (701)
T 2a3l_A 504 LNKLRESKGMTTITLRPHSGEAGDIDH-----------LAATF-----LTCHS-IAHGINLRKSPVLQYLYYLAQIGLAM 566 (701)
T ss_dssp HHHHHTTTTCCCCEECCCCSSSSCTHH-----------HHHHH-----HHCSS-CSCCGGGGGCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHcCCCCCCcccccCCCCCHHH-----------HHHHh-----cCCCe-EEEEeecccCHHHHHHHHHcCCcEEE
Confidence 345564 677 79999988642111 11111 33333 69999998755 8999999999999
Q ss_pred Cccchhhc-cCCC--cHHHHHHCCCcEEEcCCCCCCCCC--cCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHH
Q 011766 315 CPASAMRM-LGFA--PIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMA 389 (478)
Q Consensus 315 ~p~~~~~~-~~~~--~~~~~~~~gv~v~~gsD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~ 389 (478)
||.+|..+ .+.. |+..|+++|++|+++||.+...+. .+++++++.+.... +++..++.++
T Consensus 567 CP~SN~kl~~~~~~HPi~~ll~~Gv~VsLgTDdp~~~~~t~~dL~~Ey~~aa~~~--------------~ls~~dl~~l- 631 (701)
T 2a3l_A 567 SPLSNNSLFLDYHRNPFPVFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASVW--------------KLSACDLCEI- 631 (701)
T ss_dssp CHHHHTTTTCCSTTCSHHHHHHTTCCEEECCBCHHHHCCSSSHHHHHHHHHHHHH--------------TCCHHHHHHH-
T ss_pred CccchhhhccCchHhHHHHHHHCCCcEEEeCCCccccCCCCcCHHHHHHHHHHHc--------------CCCHHHHHHH-
Confidence 99999866 4555 999999999999999998765443 46899998877653 3889996666
Q ss_pred hHHHHHHcCCC
Q 011766 390 TINGAKSVLWD 400 (478)
Q Consensus 390 T~~pA~~lgl~ 400 (478)
|.|++++.+++
T Consensus 632 a~Ns~~asfl~ 642 (701)
T 2a3l_A 632 ARNSVYQSGFS 642 (701)
T ss_dssp HHHHHHHSCCC
T ss_pred HHHHHHHhCCC
Confidence 99999999985
No 78
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=98.69 E-value=2.2e-06 Score=78.00 Aligned_cols=132 Identities=16% Similarity=0.141 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEE
Q 011766 235 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 314 (478)
Q Consensus 235 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~ 314 (478)
+.+...+++|++++++|.+|+...... ..+++...+ ..+.++ |+..-+.+.++.+.+.|+.+.+
T Consensus 126 ~~f~~~~~la~~~~lPv~iH~~~a~~~-------------~~~il~~~~--~~~~v~-H~~~g~~~~~~~~~~~g~~i~~ 189 (272)
T 2y1h_A 126 QVLIRQIQLAKRLNLPVNVHSRSAGRP-------------TINLLQEQG--AEKVLL-HAFDGRPSVAMEGVRAGYFFSI 189 (272)
T ss_dssp HHHHHHHHHHHHHTCCEEEECTTCHHH-------------HHHHHHHTT--CCSEEE-ETCCSCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHhCCcEEEEeCCcHHH-------------HHHHHHhCC--CCCEEE-EccCCCHHHHHHHHHCCCEEEE
Confidence 457788899999999999999753221 223444433 124455 9977677888999999999998
Q ss_pred CccchhhccCCCcHHHHHHCC--CcEEEcCCCCCCC------CCcCHHH-HHHHHHHHhcccccccCCCCCCCCCCHHHH
Q 011766 315 CPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSN------NRMSIVD-EMYLASLINKGREVFANGTTDPAALPAETV 385 (478)
Q Consensus 315 ~p~~~~~~~~~~~~~~~~~~g--v~v~~gsD~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ls~~~a 385 (478)
.+.... ...++++++.. -++.++||++... +...... .+...... .|+|.+++
T Consensus 190 ~g~~~~----~~~~~~~~~~~~~drll~eTD~P~~~p~~g~~~~p~~l~~~~~~la~~--------------~g~~~e~~ 251 (272)
T 2y1h_A 190 PPSIIR----SGQKQKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISAEYIAQV--------------KGISVEEV 251 (272)
T ss_dssp CGGGGT----CHHHHHHHHHSCGGGEEECCCTTSSCSSTTSCCCGGGHHHHHHHHHHH--------------HTSCHHHH
T ss_pred CCcccC----cHHHHHHHHhCCHHHEEEecCCCCCCCCCCCcCcHHHHHHHHHHHHHH--------------HCcCHHHH
Confidence 865431 12456666553 3789999986321 1111111 11111110 15899999
Q ss_pred HHHHhHHHHHHcCCC
Q 011766 386 LRMATINGAKSVLWD 400 (478)
Q Consensus 386 l~~~T~~pA~~lgl~ 400 (478)
.+..+.||++++++.
T Consensus 252 ~~~~~~N~~~l~~~~ 266 (272)
T 2y1h_A 252 IEVTTQNALKLFPKL 266 (272)
T ss_dssp HHHHHHHHHHHSTTH
T ss_pred HHHHHHHHHHHHHhH
Confidence 999999999999984
No 79
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=98.68 E-value=1.6e-06 Score=80.89 Aligned_cols=243 Identities=15% Similarity=0.092 Sum_probs=134.6
Q ss_pred ChHHHHHHHHHHHHHHHhcCcceeecCCc----cCHHHHHHHHHHhCCeEEEecccccCCCCCCCcccccC-CcccCCCC
Q 011766 119 TEEDSYISTLLCGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRT-TDDCIQPD 193 (478)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~GvTtv~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 193 (478)
...+.+........++.++||+++++... .....+.+.++..|+..+....+.......+..+.... .....+
T Consensus 57 ~~~~~~~~~~~el~~a~~aGv~tiV~~~~~~~~r~~~~l~~la~~~g~~i~~~tG~hp~~~~~~~~~~~~~~~~~~~~-- 134 (339)
T 3gtx_A 57 DHAAALASCTETARALLARGIQTVVDATPNGCGRNPAFLREVSEATGLQILCATGFYYEGGGATTYFKFRASLGDAES-- 134 (339)
T ss_dssp CHHHHHHHHHHHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHCCEEECEECCCCTTTSSCHHHHHHHHHSCHHH--
T ss_pred chHHHHHHHHHHHHHHHHhCCCeEEecCCCccCcCHHHHHHHHHHcCCcEEEEcCCCccCccCCcCCcccccccCCHH--
Confidence 34455666666778899999999998652 45666666677778776554333221000000000000 000011
Q ss_pred CCccccccchhHHHHHHH-hc-CCCC-----CCeEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHh
Q 011766 194 SSISFNFVSSSQKELYAK-HH-HAAD-----GRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 266 (478)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~-~~-~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~ 266 (478)
+..+++.+ .. ..+. +.+.+.+..+.......+.+.+.+++|++.|++|.+|........+
T Consensus 135 ----------~L~~~~~~e~~~gIg~tg~k~g~IEigld~~~~~~~q~~~f~aq~~lA~~~glPViiH~~~gr~a~~--- 201 (339)
T 3gtx_A 135 ----------EIYEMMRTEVTEGIAGTGIRAGVIKLASSRDAITPYEQLFFRAAARVQRETGVPIITHTQEGQQGPQ--- 201 (339)
T ss_dssp ----------HHHHHHHHHHHTCSTTSSCCCSEEEEECCSSCCCHHHHHHHHHHHHHHHHHCCCEEEECSTTCCHHH---
T ss_pred ----------HHHHHHHHHHHhcccccCcccceEEEEcCCCCCCHHHHHHHHHHHHHHHHHCCeEEEeCCCCcCHHH---
Confidence 33333322 11 1111 2234434443222222335677778999999999999954221111
Q ss_pred hhcCCCCchHHHHhhhCCCCCCeeeeeec-cCChhHHHHHHhcCCeEEECccch--hh-----ccCCCcHHHHHHCCC--
Q 011766 267 DTRKVDHGTVTFLDKIEFLQNNLLSAHTV-WVNHTEIGLLSRAGVKVSHCPASA--MR-----MLGFAPIKEMLHADI-- 336 (478)
Q Consensus 267 ~~~~~~~~~~~~l~~~~~~~~~~~i~h~~-~~~~~~~~~~~~~~~~~~~~p~~~--~~-----~~~~~~~~~~~~~gv-- 336 (478)
..+++...+....+.++.||. .-+.++...+.+.|..+.+.-... +. ......++++++.+.
T Consensus 202 --------~~~iL~~~~~~~~~~vi~H~~~~~~~e~a~~~l~~G~~i~~~g~~t~~~~~~p~~~~~~~~l~~li~~~~~d 273 (339)
T 3gtx_A 202 --------QAELLTSLGADPARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIGLQGMVGTPTDAERLSVLTTLLGEGYAD 273 (339)
T ss_dssp --------HHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEECCTTCCSSTTCCCHHHHHHHHHHHHHTTCGG
T ss_pred --------HHHHHHHcCCCcccEEEEccCCCCCHHHHHHHHHcCcEEEEccCccccccCCCchHHHHHHHHHHHHhcCCC
Confidence 234555555444456788998 467888999999999888754311 00 012234677888774
Q ss_pred cEEEcCCCCCCC-----------------CCcCHH-HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 011766 337 CVSLGTDGAPSN-----------------NRMSIV-DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 398 (478)
Q Consensus 337 ~v~~gsD~~~~~-----------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lg 398 (478)
++.+.||++... +..... ....... . ..|+|.+++.++.|.||+++|+
T Consensus 274 rilleTD~p~~~~~~P~~~p~~~~~~~g~n~p~~l~~~~~~~~-~-------------~~Gis~e~i~~~~~~Np~rlf~ 339 (339)
T 3gtx_A 274 RLLLSHDSIWHWLGRPPAIPEAALPAVKDWHPLHISDDILPDL-R-------------RRGITEEQVGQMTVGNPARLFG 339 (339)
T ss_dssp GEEECCCCEEEESSSCCCCCGGGHHHHHTCSTTHHHHTHHHHH-H-------------HTTCCHHHHHHHHTHHHHHHHC
T ss_pred eEEEecCCCccccCCcccccccccccCCCCCchhHHHHHHHHH-H-------------HcCCCHHHHHHHHHHHHHHHhC
Confidence 799999986310 001111 1111111 1 1369999999999999999985
No 80
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=98.68 E-value=2.8e-06 Score=76.67 Aligned_cols=134 Identities=12% Similarity=0.069 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEE
Q 011766 235 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 314 (478)
Q Consensus 235 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~ 314 (478)
+.+...+++|.+++++|.+|+...... ..+.+...+. ..+. +.|+..-+.+.+..+.+.|..+.+
T Consensus 114 ~~f~~~~~~a~~~~~Pv~iH~~~a~~~-------------~~~il~~~~~-~~~~-i~H~~~g~~~~~~~~~~~g~~i~~ 178 (259)
T 1zzm_A 114 WLLDEQLKLAKRYDLPVILHSRRTHDK-------------LAMHLKRHDL-PRTG-VVHGFSGSLQQAERFVQLGYKIGV 178 (259)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEESCHHH-------------HHHHHHHHCC-TTCE-EETTCCSCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHhCCcEEEEecccHHH-------------HHHHHHhcCC-CCCE-EEEcCCCCHHHHHHHHHCCCEEEE
Confidence 467788899999999999999653221 2344444432 1233 449877677888888889999998
Q ss_pred CccchhhccCCCcHHHHHHCC--CcEEEcCCCCCCCC--------CcCHH-HHHHHHHHHhcccccccCCCCCCCCCCHH
Q 011766 315 CPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNN--------RMSIV-DEMYLASLINKGREVFANGTTDPAALPAE 383 (478)
Q Consensus 315 ~p~~~~~~~~~~~~~~~~~~g--v~v~~gsD~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ls~~ 383 (478)
...... .....++++++.. -++.++||++.... ..... ..+...... .++|.+
T Consensus 179 ~g~~~~--~~~~~~~~~~~~~~~dril~eTD~P~~~p~~~~g~~~~p~~l~~~~~~la~~--------------~g~~~e 242 (259)
T 1zzm_A 179 GGTITY--PRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAVLCEL--------------RREPAD 242 (259)
T ss_dssp CGGGGC--TTTCSHHHHHHHSCGGGEEECCCBTSSCCTTCTTSCCCGGGHHHHHHHHHHH--------------CSSCHH
T ss_pred Cceeec--cccHHHHHHHHhCCHHHEEEecCCCCccCCCCCCCCCcHHHHHHHHHHHHHH--------------HCcCHH
Confidence 754321 1223456666543 57999999863210 01111 111111101 259999
Q ss_pred HHHHHHhHHHHHHcCC
Q 011766 384 TVLRMATINGAKSVLW 399 (478)
Q Consensus 384 ~al~~~T~~pA~~lgl 399 (478)
++.+..|.|++++|++
T Consensus 243 ~~~~~~~~Na~rl~~l 258 (259)
T 1zzm_A 243 EIAQALLNNTYTLFNV 258 (259)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhCc
Confidence 9999999999999987
No 81
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=98.57 E-value=5e-06 Score=77.07 Aligned_cols=245 Identities=12% Similarity=0.104 Sum_probs=133.8
Q ss_pred HHHHHHHHHhcCcceeecCC----ccCHHHHHHHHHHhCCeEEEecccccCCCC---CCCcccc--cC---CcccCCCCC
Q 011766 127 TLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEG---LPASWAV--RT---TDDCIQPDS 194 (478)
Q Consensus 127 ~~~~~~~~l~~GvTtv~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~--~~---~~~~~~~~~ 194 (478)
......++.+.|++|++|.. +.....+.+..+..|++.+.+..++..... +...+.. .. .+....
T Consensus 48 ~~~el~~~~~~G~~tiVd~t~~~~gR~~~~l~~is~~tgv~iv~~TG~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 124 (330)
T 3pnz_A 48 SQLDVQDFADLGGKTIVDATAVDYGRRVLDVAQISKETGIQIVGTAGFNKSFLWDGKIKPELKPIIGDFETYYEWIE--- 124 (330)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGCBCHHHHHHHHHHHCCEEEEEEECCCGGGGGSBCCGGGHHHHCSCSBHHHHHH---
T ss_pred HHHHHHHHHHhCCCEEEECCCCccccCHHHHHHHHHHhCCEEEEeCCCCccccccccccccccccccccccCchhhc---
Confidence 34455667889999999963 345667777888899999877655432110 0000000 00 000000
Q ss_pred CccccccchhHH-HHHHHhcCC-CCCC-----eEEEEeccccccCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhh
Q 011766 195 SISFNFVSSSQK-ELYAKHHHA-ADGR-----IRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 267 (478)
Q Consensus 195 ~~~~~~~~~~~~-~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~ 267 (478)
....++.. .++++.... .... +++.++.........+.+.+.+++|++.|++|.+|........+
T Consensus 125 ----~~~~e~l~~~~~~ei~~Gi~~t~vkaGvIEiGld~~~~~~~q~~~f~aq~~~A~~~glPViiH~r~g~~a~~---- 196 (330)
T 3pnz_A 125 ----NTTTDKLTEFVVNEVENGLEGTPYKAGQVKFGTGYNMITPLEEKTIRAVARAHHETKAPIHSHTEAGTMALE---- 196 (330)
T ss_dssp ----TSCHHHHHHHHHHHHHTCSTTSSCCEEEEEEECBTTBCCHHHHHHHHHHHHHHHHHCCCEEEECGGGCCHHH----
T ss_pred ----cCCHHHHHHHHHHHHHhhCCCcCcCcCeEEEEcCCCCCCHHHHHHHHHHHHHHHHHCCeEEEeCCCCcChHH----
Confidence 00001222 222333221 1112 33333333222223345777789999999999999875321111
Q ss_pred hcCCCCchHHHHhhhCCCCCCeeeeeec-cCChhHHHHHHhcCCeEEECccchhh----ccCCCcHHHHHHCC--CcEEE
Q 011766 268 TRKVDHGTVTFLDKIEFLQNNLLSAHTV-WVNHTEIGLLSRAGVKVSHCPASAMR----MLGFAPIKEMLHAD--ICVSL 340 (478)
Q Consensus 268 ~~~~~~~~~~~l~~~~~~~~~~~i~h~~-~~~~~~~~~~~~~~~~~~~~p~~~~~----~~~~~~~~~~~~~g--v~v~~ 340 (478)
..+++...+....+.++.||. .-+.+....+.+.|..+.+.-..... ......++++++.| -.+.+
T Consensus 197 -------~l~iL~e~~~~~~~vvi~H~~~s~~~e~a~~~l~~G~~i~~~g~~t~~~~~~~~~~~~l~~lv~~g~~drill 269 (330)
T 3pnz_A 197 -------QIEILKQENIPLEYLSIGHMDRNLDPYYHKQVAKTGAFMSFDGIAKIKYAPESARIAAILYLVSEGFEDQILV 269 (330)
T ss_dssp -------HHHHHHHTTCCGGGEEETTGGGSCCHHHHHHHHTTTCEEEECCTTCTTTCCHHHHHHHHHHHHHTTCGGGEEE
T ss_pred -------HHHHHHHcCCCCCeEEEecCCCCCCHHHHHHHHHcCcEEEEccCcccCCCChHHHHHHHHHHHHcCCCCeEEE
Confidence 234455555444567788996 55778888899999988876432110 01123467778777 47999
Q ss_pred cCCCCCC--------CCCcCHH-HHHHHHHHHhcccccccCCCCCCCCCCHHH-HHHHHhHHHHHHcCC
Q 011766 341 GTDGAPS--------NNRMSIV-DEMYLASLINKGREVFANGTTDPAALPAET-VLRMATINGAKSVLW 399 (478)
Q Consensus 341 gsD~~~~--------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~-al~~~T~~pA~~lgl 399 (478)
.||++.. .+..... ..+.. .+.... ...|+|.++ +.++.|.||+++|++
T Consensus 270 eTD~p~~~~~~~~G~~~~~~~~~~~~~~-~l~~~a---------~~~Gis~ee~i~~~t~~Np~rlf~l 328 (330)
T 3pnz_A 270 SGDTARKTYYKHYGHGPGLEYIAKKWVP-RFIDEA---------NEKGFDGEKLVKKFFVDNPARCFTF 328 (330)
T ss_dssp CCCCCSGGGSHHHHCCSTTTHHHHTHHH-HHHHHH---------HHTTSCHHHHHHHHHTHHHHHHSSC
T ss_pred eCCCCCCCCCCccCCCCCcchHHHHHHH-HHHHHH---------HHcCCCHHHHHHHHHHHhHHHHhcC
Confidence 9998631 1111111 11100 110000 012699998 999999999999998
No 82
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=98.54 E-value=4e-05 Score=69.57 Aligned_cols=140 Identities=8% Similarity=-0.016 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEE
Q 011766 234 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS 313 (478)
Q Consensus 234 ~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~ 313 (478)
.+.+.+.+++|++++++|.+|+-..... ..+++........+ .+.|+..-+.++++++.+.|..+.
T Consensus 113 ~~~F~~ql~lA~e~~lPv~iH~r~a~~~-------------~l~il~~~~~~~~~-~V~H~fsG~~e~a~~~l~~G~yis 178 (287)
T 3rcm_A 113 EKALEAQLTLAAQLRLPVFLHERDASER-------------LLAILKDYRDHLTG-AVVHCFTGEREALFAYLDLDLHIG 178 (287)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHHTTGGGCSC-EEECSCCCCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcHHH-------------HHHHHHHcCCCCCe-EEEEeCCCCHHHHHHHHHCCcEEE
Confidence 4567788899999999999999764322 22334433222123 355987778899999999999999
Q ss_pred ECccchhhccCCCcHHHHHHCC--CcEEEcCCCCCCCC------------CcCHHHHHHHHHHHhcccccccCCCCCCCC
Q 011766 314 HCPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNN------------RMSIVDEMYLASLINKGREVFANGTTDPAA 379 (478)
Q Consensus 314 ~~p~~~~~~~~~~~~~~~~~~g--v~v~~gsD~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (478)
+....... .....++++++.- -++.+.||++.... ........ +..+... .|
T Consensus 179 ~~g~i~~~-k~~~~l~~~v~~ip~drlLlETD~P~l~p~~~~~~~rg~~n~P~~l~~v--~~~lA~~-----------~g 244 (287)
T 3rcm_A 179 ITGWICDE-RRGTHLHPLVGNIPEGRLMLESDAPYLLPRSLRPKPKSGRNEPAFLPEV--LREVALH-----------RG 244 (287)
T ss_dssp ECGGGGCT-TTCGGGHHHHTTSCTTSEEECCCTTSCCCTTCSSCCTTCCCCGGGHHHH--HHHHHHH-----------HT
T ss_pred ECchhccc-cCHHHHHHHHHhcCCccEEEeccCCccCccccccccCCCcCCHHHHHHH--HHHHHHH-----------hC
Confidence 88543321 1223456666553 46899999863211 00111111 1111100 15
Q ss_pred CCHHHHHHHHhHHHHHHcCCCC
Q 011766 380 LPAETVLRMATINGAKSVLWDN 401 (478)
Q Consensus 380 ls~~~al~~~T~~pA~~lgl~~ 401 (478)
+|.+++.+.+|.|+++++++..
T Consensus 245 ~s~eev~~~~~~N~~rlf~l~~ 266 (287)
T 3rcm_A 245 ESAEHTAAHTTATARDFFQLPA 266 (287)
T ss_dssp SCHHHHHHHHHHHHHHHTTCCC
T ss_pred cCHHHHHHHHHHHHHHHHCCCh
Confidence 9999999999999999999853
No 83
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=98.52 E-value=3.8e-06 Score=79.01 Aligned_cols=228 Identities=11% Similarity=0.071 Sum_probs=127.9
Q ss_pred HHHHHHHHhcCcceeecCC-----ccCHHHHHHHHHHhCCeEEEecccccCCCCCCCcccccCCcccCCCCCCccccccc
Q 011766 128 LLCGIELIHSGVTCFAEAG-----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQPDSSISFNFVS 202 (478)
Q Consensus 128 ~~~~~~~l~~GvTtv~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (478)
..-..++..+|+|++++.. +.....+...++..|+..+....++... ..+.+... .++
T Consensus 78 ~~el~~~~~aGv~tiV~~~g~~g~~r~~~~l~~la~~~gi~i~~~tG~y~~~--~~P~~~~~----~~~----------- 140 (365)
T 3rhg_A 78 IFELNNFKELGGKTIVDATGSSSIGRDIRKLKQVAELTGINVVASSGLYIEK--FEGKRLAD----DID----------- 140 (365)
T ss_dssp HHHHHHHHHTTEEEEEECCCSGGGTCCHHHHHHHHHHHCCEEECEECCCCHH--HHGGGGGS----CHH-----------
T ss_pred HHHHHHHHhcCCCeEEEcCCCCCCCCCHHHHHHHHHHHCCcEEEEeCccCCC--CCchhhcC----CHH-----------
Confidence 3455778999999999976 2355666667778888775543332100 00111110 111
Q ss_pred hhHHHHH-HHhcCC-C-----CCCeEEEEeccccccCCH---HHHHHHHHHHHHc-CCceeEec-cCChhhhHHHhhhcC
Q 011766 203 SSQKELY-AKHHHA-A-----DGRIRIWFGIRQIMNATD---RLLLETRDMAREF-KTGIHMHV-AEIPYENQVVMDTRK 270 (478)
Q Consensus 203 ~~~~~~~-~~~~~~-~-----~~~~~~~~~~~~~~~~~~---~~l~~~~~~a~~~-~~~v~~H~-~~~~~~~~~~~~~~~ 270 (478)
+..+.+ ++.... . .+.+.- ++... ..++ +.+.+.+++|++. |++|.+|. .......+
T Consensus 141 -~L~~~~~~ei~~gi~~t~vkag~IGE-iGld~--~~t~~q~~~f~aq~~~A~~~~glPV~iH~~r~~~a~~e------- 209 (365)
T 3rhg_A 141 -AMAKMIDDELNIGIDGTDIRAGMIGE-IGVSP--FFTDGEKNSLRAAALAQNNNPYASMNIHMPGWQRRGDE------- 209 (365)
T ss_dssp -HHHHHHHHHHHTCSTTSSCCCCEEEE-EECCT--TCCHHHHHHHHHHHHHHTTCTTCEEEEECCTTSCCHHH-------
T ss_pred -HHHHHHHHHHHhccccCCceeEEEEE-EEcCC--CCCHHHHHHHHHHHHHHHHhcCCcEEEECCCCCcCHHH-------
Confidence 333232 222211 1 111211 22221 2233 3577777899999 99999997 42222111
Q ss_pred CCCchHHHHhhh-CCCCCCeeeeeec-c-CChhHHHHHHhcCCeEEECccc---hhhc--------cCCCcHHHHHHCCC
Q 011766 271 VDHGTVTFLDKI-EFLQNNLLSAHTV-W-VNHTEIGLLSRAGVKVSHCPAS---AMRM--------LGFAPIKEMLHADI 336 (478)
Q Consensus 271 ~~~~~~~~l~~~-~~~~~~~~i~h~~-~-~~~~~~~~~~~~~~~~~~~p~~---~~~~--------~~~~~~~~~~~~gv 336 (478)
.+..+... +....+.++.||. . -+.+....+.+.|..+.+.-.. .+.. .....++++++.|.
T Consensus 210 ----~l~iL~e~~~~~~~~vvi~H~~rs~~~~e~a~~~l~~G~~I~~~g~g~~~tf~~~~~~~~d~~~a~~l~~li~~g~ 285 (365)
T 3rhg_A 210 ----VLDILLTEMGCDPAKISLAHSDPSGKDIDYQCKMLDRGVWLEFDMIGLDISFPKEGAAPSVMDTVEAVATLIERGY 285 (365)
T ss_dssp ----HHHHHTTTTCCCGGGEEESCCGGGTTCHHHHHHHHHTTCEEEECCTTCCCBCSSSCBCCCHHHHHHHHHHHHHTTC
T ss_pred ----HHHHHHhccCCCCCceEEecCCCCCCCHHHHHHHHhCCCEEEecCCCccccccccccccchHHHHHHHHHHHHhCC
Confidence 23344443 3333456778999 4 5788889999999998876421 0100 11234677888884
Q ss_pred --cEEEcCCCCCCC-------CCcCHH-HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 011766 337 --CVSLGTDGAPSN-------NRMSIV-DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 401 (478)
Q Consensus 337 --~v~~gsD~~~~~-------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~ 401 (478)
.+.+.||++... +..... ....... . ..|+|.+++.++.|.||+++|++.+
T Consensus 286 ~drilleTD~p~l~~~~~~G~~~~~~l~~~~~~~~-~-------------~~Gis~e~i~~~~~~Np~rlf~l~~ 346 (365)
T 3rhg_A 286 GNQIVLSHDVFLKQMWAKNGGNGWGFVPNVFLSLL-A-------------QRGIDKTIIDKLCIDNPANLLAAEN 346 (365)
T ss_dssp GGGEEECCCCCSGGGSGGGTSCTTTHHHHTHHHHH-H-------------HTTCCHHHHHHHTTHHHHHHHHSCC
T ss_pred CCcEEEeCCCCCCCCCCcCCCCCchhHHHHHHHHH-H-------------HcCCCHHHHHHHHHHHHHHHHCCCC
Confidence 799999985321 111111 1111111 1 1369999999999999999999854
No 84
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=98.50 E-value=3.8e-06 Score=75.99 Aligned_cols=136 Identities=12% Similarity=-0.017 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEE
Q 011766 235 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 314 (478)
Q Consensus 235 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~ 314 (478)
+.+...+++|.++++++.+|+...... ..+.+...+....+. +.|+..-+.+.++.+.+.|+.+.+
T Consensus 112 ~~f~~~l~~a~~~~lpv~iH~~~a~~~-------------~~~il~~~~~~~~~~-v~H~~~g~~~~~~~~~~~g~yi~~ 177 (264)
T 1xwy_A 112 RAFVAQLRIAADLNMPVFMHCRDAHER-------------FMTLLEPWLDKLPGA-VLHCFTGTREEMQACVAHGIYIGI 177 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHGGGGGGSSCE-EECSCCCCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHhCCcEEEEcCCchHH-------------HHHHHHhcCCCCCcE-EEEccCCCHHHHHHHHHCCeEEEE
Confidence 347778899999999999998643211 223333333212334 449866677888888889999888
Q ss_pred CccchhhccCCCcHHHHHHCC--CcEEEcCCCCCCCCC------------cCHH-HHHHHHHHHhcccccccCCCCCCCC
Q 011766 315 CPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNNR------------MSIV-DEMYLASLINKGREVFANGTTDPAA 379 (478)
Q Consensus 315 ~p~~~~~~~~~~~~~~~~~~g--v~v~~gsD~~~~~~~------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (478)
...... ......++++++.. -++.++||++..... ...+ ..+...... .+
T Consensus 178 ~g~~~~-~~~~~~l~~~~~~~~~drll~eTD~P~~~~~~~~~~~~g~~n~p~~~~~~~~~~a~~--------------~g 242 (264)
T 1xwy_A 178 TGWVCD-ERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRIAHW--------------RG 242 (264)
T ss_dssp CGGGGC-TTTSHHHHHHGGGSCGGGEEECCCTTSCCCTTCTTCCCSSCCCGGGHHHHHHHHHHH--------------HT
T ss_pred CccccC-CcCcHHHHHHHHhCCHHHEEEecCCCCcCccccccccCCCCCchHHHHHHHHHHHHH--------------HC
Confidence 753220 11123456666553 379999999642110 0111 111111111 15
Q ss_pred CCHHHHHHHHhHHHHHHcCC
Q 011766 380 LPAETVLRMATINGAKSVLW 399 (478)
Q Consensus 380 ls~~~al~~~T~~pA~~lgl 399 (478)
+|.+++.+..+.|+++++++
T Consensus 243 ~~~e~~~~~~~~Na~rl~~l 262 (264)
T 1xwy_A 243 EDAAWLAATTDANVKTLFGI 262 (264)
T ss_dssp CCHHHHHHHHHHHHHHHHCC
T ss_pred cCHHHHHHHHHHHHHHHhCc
Confidence 89999999999999999987
No 85
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=98.47 E-value=2.6e-05 Score=70.50 Aligned_cols=137 Identities=13% Similarity=0.137 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEE
Q 011766 234 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS 313 (478)
Q Consensus 234 ~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~ 313 (478)
.+.+...+++|.++|+++.+|+...... ..+.+...+....+.+ .|+...+.+.+..+.+.|+.+.
T Consensus 110 ~~~~~~~~~~a~~~~~pv~iH~~~~~~~-------------~~~~l~~~~~p~~~~v-~H~~~~~~~~~~~~~~~g~~~~ 175 (265)
T 1yix_A 110 QESFIHHIQIGRELNKPVIVHTRDARAD-------------TLAILREEKVTDCGGV-LHCFTEDRETAGKLLDLGFYIS 175 (265)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHHHTTGGGTCEE-ETTCCSCHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEEecCchHH-------------HHHHHHhcCCCCCCEE-EEcCCCCHHHHHHHHHCCcEEE
Confidence 3457788899999999999999753221 2233443322223444 4998878888999988999998
Q ss_pred ECccchhhccCCCcHHHHHHC-C-CcEEEcCCCCCCC---------CCcCHHHHHHHHHHHhcccccccCCCCCCCCCCH
Q 011766 314 HCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSN---------NRMSIVDEMYLASLINKGREVFANGTTDPAALPA 382 (478)
Q Consensus 314 ~~p~~~~~~~~~~~~~~~~~~-g-v~v~~gsD~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~ 382 (478)
++..... .....++.+++. + -++.++||++... .+..+...+...... .++|.
T Consensus 176 ~sg~~~~--~~~~~~~~~~~~~~~drll~~TD~P~~~~~~~~g~~~~~~~l~~~~~~l~~~--------------~~~~~ 239 (265)
T 1yix_A 176 FSGIVTF--RNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVL--------------KGVAV 239 (265)
T ss_dssp ECGGGGS--TTCHHHHHHHHHSCGGGEEECCCBTSCCCTTCTTSCCCGGGHHHHHHHHHHH--------------HTSCH
T ss_pred ECCcccc--CchHHHHHHHHhCChHHEEEecCCCCCCCcccCCCCCchHHHHHHHHHHHHH--------------hCcCH
Confidence 8864322 112345566655 4 5799999986431 111122222211111 15899
Q ss_pred HHHHHHHhHHHHHHcCCC
Q 011766 383 ETVLRMATINGAKSVLWD 400 (478)
Q Consensus 383 ~~al~~~T~~pA~~lgl~ 400 (478)
++..+.++.|++++++++
T Consensus 240 ~~~~~i~~~Na~rl~~l~ 257 (265)
T 1yix_A 240 EELAQVTTDNFARLFHID 257 (265)
T ss_dssp HHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHhCcC
Confidence 999999999999999984
No 86
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=98.44 E-value=1.4e-06 Score=82.19 Aligned_cols=139 Identities=14% Similarity=0.107 Sum_probs=98.1
Q ss_pred CCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccC--ChhHHHHHHhcC
Q 011766 232 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV--NHTEIGLLSRAG 309 (478)
Q Consensus 232 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~--~~~~~~~~~~~~ 309 (478)
.+++....+++.|++.|+++.+|+.+.....+. ..+.+.. ++. ..|.||..+ +++.++++++.+
T Consensus 194 ~p~~~f~~~f~~ar~~Gl~~t~HAGE~~~p~~~----------i~~al~~---lga-~RIgHG~~~~~d~~L~~~l~~~~ 259 (380)
T 4gxw_A 194 RPPELFWKAYRDARAAGFRTTAHAGEFGMPWRN----------VETAVDL---LHV-DRVDHGYTIVDNPELCARYAERG 259 (380)
T ss_dssp CCGGGGHHHHHHHHHTTCEEEEEESCTTCCHHH----------HHHHHHT---SCC-SEEEECGGGGGCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCCeeeeccccCCchHH----------HHHHHHH---cCC-cccccceeeccChHHHHHHHHhC
Confidence 345567788899999999999999885321111 1122222 222 348999987 677899999999
Q ss_pred CeEEECccchhhccC--------CCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCC
Q 011766 310 VKVSHCPASAMRMLG--------FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALP 381 (478)
Q Consensus 310 ~~~~~~p~~~~~~~~--------~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls 381 (478)
+.+.+||.+|..... ..|++.+++.|++++++||.+... ..++..++..+... .+++
T Consensus 260 I~lEvCP~SN~~l~~v~~~~~~~~HP~~~l~~~Gv~vtinTDDp~~f-~t~Ls~Ey~~~~~~--------------~gls 324 (380)
T 4gxw_A 260 IVFTVVPTNSYYLRTLPPDQWAERHPMRKMPGLGLKIHPNTDDPTLH-KVNPSEAWELMFSH--------------FGFT 324 (380)
T ss_dssp CEEEECTTCHHHHHHSCTTTHHHHCGGGGTGGGTCEEEECCBSHHHH-TCCHHHHHHHHHHT--------------SCCC
T ss_pred ceeEECCcchhhhcccccccccccChHHHHHHCCCeEEECCCCchhh-CCCHHHHHHHHHHH--------------hCcC
Confidence 999999999976521 248999999999999999986432 23466665544422 2589
Q ss_pred HHHHHHHHhHHHHHHcCCC
Q 011766 382 AETVLRMATINGAKSVLWD 400 (478)
Q Consensus 382 ~~~al~~~T~~pA~~lgl~ 400 (478)
.++.. .++.|+.+...++
T Consensus 325 ~~dl~-~l~~nsi~~sF~~ 342 (380)
T 4gxw_A 325 IADLK-QFMLNGIDGAWVD 342 (380)
T ss_dssp HHHHH-HHHHHHHHHSSSC
T ss_pred HHHHH-HHHHHHHHHHcCC
Confidence 99865 5667888877664
No 87
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=98.19 E-value=1.7e-05 Score=70.40 Aligned_cols=133 Identities=16% Similarity=0.020 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHcCCcee-EeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEE
Q 011766 235 RLLLETRDMAREFKTGIH-MHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS 313 (478)
Q Consensus 235 ~~l~~~~~~a~~~~~~v~-~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~ 313 (478)
+.+.+.+++|+++++||. +|+-..... ..+.+..... ....+.||..-+.++++++.+.|..+.
T Consensus 104 ~~F~~ql~lA~e~~lPviSiH~r~a~~~-------------~~~il~~~~~--~~~~v~H~fsG~~e~a~~~l~~G~yis 168 (254)
T 3gg7_A 104 AVFQHILRRCEDHGGRILSIHSRRAESE-------------VLNCLEANPR--SGTPILHWYSGSVTELRRAISLGCWFS 168 (254)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTCHHH-------------HHHHHHHCGG--GEEEEEETCCSCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEEcCCcHHH-------------HHHHHHHcCC--CCcEEEEeCCCCHHHHHHHHcCCcEEE
Confidence 347777899999999997 999764322 2334444321 112356988878899999999999998
Q ss_pred ECccchhhccCCCcHHHHHHCC--CcEEEcCCCCCCC-----CCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 011766 314 HCPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSN-----NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 386 (478)
Q Consensus 314 ~~p~~~~~~~~~~~~~~~~~~g--v~v~~gsD~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al 386 (478)
+.+... ....++++++.- -++.+.||++... +........ +..+... .++|.+++.
T Consensus 169 ~~g~~~----~~~~~~~~v~~ip~drlLlETD~P~~~~rg~~n~P~~v~~v--~~~iA~~-----------~g~~~ee~~ 231 (254)
T 3gg7_A 169 VGPTMV----RTQKGAALIRSMPRDRVLTETDGPFLELDGQAALPWDVKSV--VEGLSKI-----------WQIPASEVE 231 (254)
T ss_dssp ECHHHH----TSHHHHHHHHHSCGGGEEECCCTTTSEETTEECCGGGHHHH--HHHHHHH-----------HTSCHHHHH
T ss_pred ECcccC----chHHHHHHHHHcCCCeEEEeCCCCccccCCCCCCHHHHHHH--HHHHHHH-----------hCcCHHHHH
Confidence 886543 122345555442 3689999986421 111111111 1111110 158999999
Q ss_pred HHHhHHHHHHcCC
Q 011766 387 RMATINGAKSVLW 399 (478)
Q Consensus 387 ~~~T~~pA~~lgl 399 (478)
+..+.|+.+++++
T Consensus 232 ~~~~~N~~~lf~~ 244 (254)
T 3gg7_A 232 RIVKENVSRLLGT 244 (254)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCC
Confidence 9999999999988
No 88
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=98.10 E-value=8.5e-06 Score=79.33 Aligned_cols=117 Identities=12% Similarity=0.150 Sum_probs=80.8
Q ss_pred CHHHHHHHHHH--HHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCC--hhHHHHHHhc
Q 011766 233 TDRLLLETRDM--AREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRA 308 (478)
Q Consensus 233 ~~~~l~~~~~~--a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~--~~~~~~~~~~ 308 (478)
+++....+++. +++.|+++.+|+.+...... .....+.+.. .++. ..|+||..+. ++.++++++.
T Consensus 307 p~~~f~~~f~~~~A~~~gl~~t~HAGE~~~~g~---------~~~~~i~~Al-~Lga-~RIgHGv~l~~dp~l~~~l~~~ 375 (508)
T 3lgd_A 307 SLHDYKEALMIPAKDGVKLPYFFHAGETDWQGT---------SIDRNILDAL-MLNT-TRIGHGFALSKHPAVRTYSWKK 375 (508)
T ss_dssp CTGGGHHHHTHHHHTTCCCCBCCEECCSSCCSS---------TTTTHHHHHH-HTTC-SSEEECTTGGGCHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHcCCceeeecccccCCCC---------CcHHHHHHHH-hcCC-ceeeeeEecCccHHHHHHHHhc
Confidence 44556666777 78899999999988643110 0011122222 1332 3479999996 7899999999
Q ss_pred CCeEEECccchhhcc-----CCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHH
Q 011766 309 GVKVSHCPASAMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLA 360 (478)
Q Consensus 309 ~~~~~~~p~~~~~~~-----~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~ 360 (478)
++.+.+||.+|.... ...|++.++++|++|+++||.+...+...+..+...+
T Consensus 376 ~I~levCP~SN~~l~~v~~~~~hP~~~ll~~Gv~V~l~TDdp~~f~~~~Ls~Ey~~a 432 (508)
T 3lgd_A 376 DIPIEVCPISNQVLKLVSDLRNHPVATLMATGHPMVISSDDPAMFGAKGLSYDFYEV 432 (508)
T ss_dssp TCCEEECHHHHHHTTSCSSGGGCTHHHHHHTTCCEEECCBSHHHHTCCTTHHHHHHH
T ss_pred CCeEEECcchHHHhCCCCCcccChHHHHHHCCCcEEEcCCCccccCCCchHHHHHHH
Confidence 999999999998773 2369999999999999999986543222344554444
No 89
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=97.97 E-value=0.00016 Score=66.46 Aligned_cols=140 Identities=9% Similarity=-0.002 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEEE
Q 011766 235 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 314 (478)
Q Consensus 235 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~~ 314 (478)
+.+...+++|++++++|.+|+...... ..+++..... .....+.|+..-+.+.++.+.+.|..+.+
T Consensus 127 ~~f~~ql~lA~~~~lPv~iH~r~a~~~-------------~~~il~~~~~-~~~~~i~H~f~g~~~~~~~~l~~g~yi~~ 192 (301)
T 2xio_A 127 KYFEKQFELSEQTKLPMFLHCRNSHAE-------------FLDITKRNRD-RCVGGVVHSFDGTKEAAAALIDLDLYIGF 192 (301)
T ss_dssp HHHHHTHHHHHHHCCCEEEEEESCHHH-------------HHHHHHHTGG-GSSCEEETTCCCCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHhCCcEEEEecCchHH-------------HHHHHHhccC-CCCcEEEEccCCCHHHHHHHHhcCcEEEE
Confidence 457777899999999999999643221 2233443321 11235689877688888899999999988
Q ss_pred CccchhhccCCCcHHHHHHCC--CcEEEcCCCCCCC------------------------------CCcCHHHHHHHHHH
Q 011766 315 CPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSN------------------------------NRMSIVDEMYLASL 362 (478)
Q Consensus 315 ~p~~~~~~~~~~~~~~~~~~g--v~v~~gsD~~~~~------------------------------~~~~~~~~~~~~~~ 362 (478)
... ... ....+++++.. -++.++||++... +....... .+..
T Consensus 193 ~g~-~~~---~~~~~~~~~~~p~drlLleTD~P~~~~~~~~~~~~~l~~~~p~~~~~~~g~~~~~~n~p~~v~~--~~~~ 266 (301)
T 2xio_A 193 NGC-SLK---TEANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKWESGHCLKDRNEPCHIIQ--ILEI 266 (301)
T ss_dssp CGG-GSS---SHHHHHHHHTSCGGGEEECCCTTSCCCCTTSTTGGGCCCCCCEESSCCTTSEETTCCCGGGHHH--HHHH
T ss_pred ccc-ccC---ChHHHHHHHhCChHHEEEecCCCcccccccccccccccccCcccccccccccCCCCCChHHHHH--HHHH
Confidence 754 111 11123555543 4689999986421 00111111 1111
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcccc
Q 011766 363 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSL 406 (478)
Q Consensus 363 ~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l 406 (478)
+... .++|.++..+..+.|+++++++.. +|.|
T Consensus 267 ia~l-----------~g~~~e~~~~~~~~Na~rlf~~~~-~~~~ 298 (301)
T 2xio_A 267 MSAV-----------RDEDPLELANTLYNNTIKVFFPVI-AENL 298 (301)
T ss_dssp HHHH-----------HTCCHHHHHHHHHHHHHHHHCCC------
T ss_pred HHHH-----------HCcCHHHHHHHHHHHHHHHhCchh-hhhc
Confidence 1110 159999999999999999999853 4543
No 90
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=97.96 E-value=0.00031 Score=64.35 Aligned_cols=139 Identities=7% Similarity=-0.036 Sum_probs=78.0
Q ss_pred CCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCC---------hhHH
Q 011766 232 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN---------HTEI 302 (478)
Q Consensus 232 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~---------~~~~ 302 (478)
...+.+...++++.++|+++.+|...... .. ....+... ..+.++.|+.... .+.+
T Consensus 134 ~~~~~~~~~~~~a~~~glpv~iH~~~~~l--~~----------~~~~l~~~---p~~~Vi~H~g~p~~~~g~~~~~~~~~ 198 (294)
T 4i6k_A 134 LNTPDWQKFLRNVESLNWQVELHAPPKYL--VQ----------LLPQLNEY---SFDVVIDHFGRVDPVKGIEDPDYQKF 198 (294)
T ss_dssp SSSHHHHHHHHHHHHTTCEEEEECCHHHH--HH----------HHHHHTTS---SSCEEESGGGCCCTTTCTTCHHHHHH
T ss_pred cccHHHHHHHHHHHHcCCEEEEeeCcchH--HH----------HHHHHHHC---CCCEEEECCCCCCCCCCCCCHHHHHH
Confidence 45578889999999999999999964221 00 12233322 2467788887642 1233
Q ss_pred HHHHhc-CCeEEECccchhhcc------CCCcHHHHHH-CC-CcEEEcCCCCCCCCC--cCHHHHHHHHHHHhccccccc
Q 011766 303 GLLSRA-GVKVSHCPASAMRML------GFAPIKEMLH-AD-ICVSLGTDGAPSNNR--MSIVDEMYLASLINKGREVFA 371 (478)
Q Consensus 303 ~~~~~~-~~~~~~~p~~~~~~~------~~~~~~~~~~-~g-v~v~~gsD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 371 (478)
..+.+. |+.+.++-....... ....++.+++ .| -++.+|||++..... .+....+......
T Consensus 199 ~~l~~~~nv~~k~Sg~~~~~~~~~~~~~~~~~l~~~~~~~g~dRll~gSD~P~~~~~~~~~y~~~~~~l~~~-------- 270 (294)
T 4i6k_A 199 LSLLNVKQHWIKVSGFYRLGATPSNINIAQQAYNIFKEKGFLHKLIWGSDWPHTQHESLITYEDAIKAFKQI-------- 270 (294)
T ss_dssp HHHCCTTTEEEECCCGGGSSSTTHHHHHHHHHHHHHHHHTCGGGEECCCCBTCTTCTTTCCHHHHHHHHHHH--------
T ss_pred HHHHhCCCEEEEecccccccccCCCchhhHHHHHHHHHHhCcccEEEeCCCCCCCCcCCCCHHHHHHHHHHH--------
Confidence 333333 555554422111100 0123445443 44 479999999765322 1222211111111
Q ss_pred CCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 011766 372 NGTTDPAALPAETVLRMATINGAKSVLWD 400 (478)
Q Consensus 372 ~~~~~~~~ls~~~al~~~T~~pA~~lgl~ 400 (478)
++|.++.-+..+.|++++++++
T Consensus 271 -------~~~~~~~~~i~~~NA~rl~~l~ 292 (294)
T 4i6k_A 271 -------VFDKHEQCLILNQNPTELFGFS 292 (294)
T ss_dssp -------CCCHHHHHHHHTHHHHHHHTC-
T ss_pred -------CCCHHHHHHHHHHCHHHHhCCC
Confidence 2788888889999999999984
No 91
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=97.88 E-value=0.00042 Score=62.55 Aligned_cols=137 Identities=13% Similarity=0.114 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEE
Q 011766 234 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS 313 (478)
Q Consensus 234 ~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~ 313 (478)
.+.+...+++|.++|+++.+|....... ..+.+........+.++ |+..-+.+.+..+.+.|+.+.
T Consensus 119 ~~~f~~~~~~a~~~~lPv~iH~~~~~~~-------------~~~il~~~p~~~~~~I~-H~~~g~~~~~~~~~~~g~y~~ 184 (268)
T 1j6o_A 119 KRVFVEQIELAGKLNLPLVVHIRDAYSE-------------AYEILRTESLPEKRGVI-HAFSSDYEWAKKFIDLGFLLG 184 (268)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHHHSCCCSSCEEE-TTCCSCHHHHHHHHHHTEEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCchHHH-------------HHHHHHhcCCCCCCEEE-EcCCCCHHHHHHHHHCCCeEE
Confidence 4467888899999999999998743221 23344443322334556 987777888888888888888
Q ss_pred ECccchhhccCCCcHHHHHHC-C-CcEEEcCCCCCCCC--------CcCHHHHHHHHHHHhcccccccCCCCCCCCCCHH
Q 011766 314 HCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNN--------RMSIVDEMYLASLINKGREVFANGTTDPAALPAE 383 (478)
Q Consensus 314 ~~p~~~~~~~~~~~~~~~~~~-g-v~v~~gsD~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~ 383 (478)
+....... ....++.+++. + -++.++||++.... ....+.... ..... ..++|.+
T Consensus 185 ~sg~~~~~--~~~~l~~~i~~~~~driL~eTD~P~~~~~~~~g~~n~p~~~~~~~--~~la~-----------~~~~~~e 249 (268)
T 1j6o_A 185 IGGPVTYP--KNEALREVVKRVGLEYIVLETDCPFLPPQPFRGKRNEPKYLKYVV--ETISQ-----------VLGVPEA 249 (268)
T ss_dssp ECGGGGCT--TCHHHHHHHHHHCGGGEEECCCBTSCCCGGGTTSCCCGGGHHHHH--HHHHH-----------HHTSCHH
T ss_pred eccccccc--chHHHHHHHHhCChhhEEEecCCCCCCCcccCCCCCchHHHHHHH--HHHHH-----------HhCcCHH
Confidence 77543211 12235555544 3 57999999864311 111111111 11100 0148999
Q ss_pred HHHHHHhHHHHHHcCC
Q 011766 384 TVLRMATINGAKSVLW 399 (478)
Q Consensus 384 ~al~~~T~~pA~~lgl 399 (478)
+.-+..+.|+++++++
T Consensus 250 ~~~~i~~~Na~rlf~l 265 (268)
T 1j6o_A 250 KVDEATTENARRIFLE 265 (268)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCc
Confidence 9999999999999987
No 92
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=97.82 E-value=0.00079 Score=60.56 Aligned_cols=140 Identities=14% Similarity=0.063 Sum_probs=82.6
Q ss_pred CHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHh-cCCe
Q 011766 233 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSR-AGVK 311 (478)
Q Consensus 233 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~-~~~~ 311 (478)
..+.+...+++|.++|+++.+|....... ...++........+. +.|+..-+.+.+..+.+ .|+.
T Consensus 107 ~~~~~~~~~~~a~~~~~pv~iH~~~~~~~-------------~~~~l~~~p~~~~~~-i~H~~~g~~~~~~~~l~~~~~y 172 (265)
T 2gzx_A 107 QKEVFRKQIALAKRLKLPIIIHNREATQD-------------CIDILLEEHAEEVGG-IMHSFSGSPEIADIVTNKLNFY 172 (265)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHHHTTGGGTCE-EETTCCSCHHHHHHHHHTSCCE
T ss_pred HHHHHHHHHHHHHHcCCcEEEEecccHHH-------------HHHHHHhcCCCCCcE-EEEcCCCCHHHHHHHHHHCCce
Confidence 34557888999999999999999654221 223444433112234 45766556666766666 7888
Q ss_pred EEECccchhhccCCCcHHHHHHC-C-CcEEEcCCCCCCCCC--------cCHHHHHHHHHHHhcccccccCCCCCCCCCC
Q 011766 312 VSHCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNNR--------MSIVDEMYLASLINKGREVFANGTTDPAALP 381 (478)
Q Consensus 312 ~~~~p~~~~~~~~~~~~~~~~~~-g-v~v~~gsD~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls 381 (478)
+.+...... .....++.+++. | -++.++||++..... ........ ..... ..++|
T Consensus 173 ~~~sg~~~~--~~~~~~~~~i~~~~~dril~gSD~P~~~~~~~~g~~~~~~~~~~~~--~~l~~-----------~~~~~ 237 (265)
T 2gzx_A 173 ISLGGPVTF--KNAKQPKEVAKHVSMERLLVETDAPYLSPHPYRGKRNEPARVTLVA--EQIAE-----------LKGLS 237 (265)
T ss_dssp EEECGGGGC--SSCCHHHHHHHHSCTTTEEECCCTTSCCCTTCTTSCCCGGGHHHHH--HHHHH-----------HTTCC
T ss_pred EEecceeec--CCcHHHHHHHHhCChhhEEEccCCCCCCCcccCCCCCChHHHHHHH--HHHHH-----------HhCCC
Confidence 887744221 122346666654 3 589999998643110 01111111 11100 01589
Q ss_pred HHHHHHHHhHHHHHHcCCCC
Q 011766 382 AETVLRMATINGAKSVLWDN 401 (478)
Q Consensus 382 ~~~al~~~T~~pA~~lgl~~ 401 (478)
.++.-+..+.|+++++++.+
T Consensus 238 ~~~~~~i~~~Na~rl~~~~~ 257 (265)
T 2gzx_A 238 YEEVCEQTTKNAEKLFNLNS 257 (265)
T ss_dssp HHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHhCCch
Confidence 99999999999999999853
No 93
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=97.80 E-value=0.0019 Score=59.42 Aligned_cols=137 Identities=7% Similarity=-0.000 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHH-cCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeEE
Q 011766 235 RLLLETRDMARE-FKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS 313 (478)
Q Consensus 235 ~~l~~~~~~a~~-~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~~ 313 (478)
+.+.+-+++|++ ++++|.+|+-+.... ..+++........+. +.||..=+.++++++.+.|..+.
T Consensus 154 ~~F~~ql~lA~e~~~lPviiH~r~A~~d-------------~l~iL~~~~~~~~~g-ViH~FsGs~e~a~~~l~lG~yis 219 (325)
T 3ipw_A 154 SGYRTLSILHQKYPYLPFFFHCRKSWSD-------------LCQLNKELGYNGCKG-VVHCFDGTEEEMNQILNEGWDIG 219 (325)
T ss_dssp HHHHHTHHHHHHCTTCCEEEEEESCHHH-------------HHHHHHHTTCTTSCE-EECSCCCCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHhhCCeEEEEeCchHHH-------------HHHHHHhcCCCCCcE-EEEECCCCHHHHHHHHhcCcEEe
Confidence 346666789999 999999999764322 334455443222233 45998889999999999999999
Q ss_pred ECccchhhccCCCcHHHHHHC-C-CcEEEcCCCCCCCC------------------------------CcCHHHHHHHHH
Q 011766 314 HCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNN------------------------------RMSIVDEMYLAS 361 (478)
Q Consensus 314 ~~p~~~~~~~~~~~~~~~~~~-g-v~v~~gsD~~~~~~------------------------------~~~~~~~~~~~~ 361 (478)
+.... .. ..... +++.. . -++.+-||++.... ...+..-...+.
T Consensus 220 ~~G~~-~k--~~~~~-~~v~~iPldrlLlETDaP~l~~~~~~~~~~~~~~p~p~r~~~k~~~~~~~g~rNeP~~v~~v~~ 295 (325)
T 3ipw_A 220 VTGNS-LQ--SIELL-NVMKQIPIERLHIETDCPYCGIKKTSAGFKYLKEKDFGVKVEKYQRNKYVQRRNEPSNIIDIAI 295 (325)
T ss_dssp ECSGG-GS--SHHHH-HHHTTSCGGGEEECCCTTSCCCCTTSGGGGGCSSCCCCBCGGGCCTTSCBTTCCCGGGHHHHHH
T ss_pred eCccc-cC--cHHHH-HHHHhCCcccEEEeCCCccccccccccchhcccccCccccccccccccccCCcCcHHHHHHHHH
Confidence 88752 11 11112 33332 1 35888999863210 000111111111
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 011766 362 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 400 (478)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~ 400 (478)
.+..- .++|.+++.+..+.|.-+++++.
T Consensus 296 ~iA~l-----------~g~~~eeva~~t~~Na~~lF~~~ 323 (325)
T 3ipw_A 296 IMSSI-----------KHISLFEFVNKVYSNSMNMYFPT 323 (325)
T ss_dssp HHHHH-----------HTCCHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHh-----------hCcCHHHHHHHHHHHHHHHhCcC
Confidence 11111 15999999999999999999874
No 94
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=97.76 E-value=0.00094 Score=60.92 Aligned_cols=139 Identities=11% Similarity=-0.022 Sum_probs=78.4
Q ss_pred CCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCC---------hhHH
Q 011766 232 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN---------HTEI 302 (478)
Q Consensus 232 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~---------~~~~ 302 (478)
...+.+....++|.++|+++.+|....... . ....+.... .+.++.|+.... .+.+
T Consensus 121 ~~~~~~~~~~~~a~~~~lpv~iH~~~~~~~-~-----------~~~~~~~~p---l~~vi~H~g~~~~~~~~~~~~~~~~ 185 (288)
T 2ffi_A 121 LTGAQWRPLLERIGEQGWHVELHRQVADIP-V-----------LVRALQPYG---LDIVIDHFGRPDARRGLGQPGFAEL 185 (288)
T ss_dssp TTSTTTHHHHHHHHHHTCEEEECSCTTTHH-H-----------HHHHHTTTT---CCEEESGGGSCCTTSCTTCTTHHHH
T ss_pred cccHHHHHHHHHHHHCCCeEEEeechhhHH-H-----------HHHHHHHCC---CCEEEECCCCCCCCCCCCChhHHHH
Confidence 344568888999999999999998753210 0 223344433 357778987654 2344
Q ss_pred HHHHhc-CCeEEECccchhhcc-------CCCcHHHHHHC-C-CcEEEcCCCCCCCCC--cCHHHHHHHHHHHhcccccc
Q 011766 303 GLLSRA-GVKVSHCPASAMRML-------GFAPIKEMLHA-D-ICVSLGTDGAPSNNR--MSIVDEMYLASLINKGREVF 370 (478)
Q Consensus 303 ~~~~~~-~~~~~~~p~~~~~~~-------~~~~~~~~~~~-g-v~v~~gsD~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 370 (478)
..+.+. ++.+.++........ ....++.+++. | -++.+|||++..... .++...+......
T Consensus 186 ~~l~~~~n~y~~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~g~drll~gSD~P~~~~~~~~~~~~~~~~~~~~------- 258 (288)
T 2ffi_A 186 LTLSGRGKVWVKVSGIYRLQGSPEENLAFARQALCALEAHYGAERLMWGSDWPHTQHESEVSFGSAVEQFEAL------- 258 (288)
T ss_dssp TTCCCCSCEEEEEECGGGSSSCHHHHHHHHHHHHHHHHHHTCGGGEEEECCTTCTTCTTTCCHHHHHHHHHHH-------
T ss_pred HHHHhCCCEEEEeCcchhhccccCCCHHHHHHHHHHHHHHhCCCceEEecCCCCCCCCCCCCHHHHHHHHHHH-------
Confidence 333333 444444322111000 00234555554 5 589999999654211 1221111111111
Q ss_pred cCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 011766 371 ANGTTDPAALPAETVLRMATINGAKSVLWD 400 (478)
Q Consensus 371 ~~~~~~~~~ls~~~al~~~T~~pA~~lgl~ 400 (478)
++|.++.-+....|++++++++
T Consensus 259 --------~~~~~~~~~i~~~NA~rl~~l~ 280 (288)
T 2ffi_A 259 --------GCSAQLRQALLLDTARALFGFE 280 (288)
T ss_dssp --------CCCHHHHHHHHTHHHHHHTTCC
T ss_pred --------CCCHHHHHHHHHHCHHHHhCcc
Confidence 2588888889999999999985
No 95
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=97.71 E-value=0.00037 Score=62.28 Aligned_cols=135 Identities=13% Similarity=0.118 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHcCCceeEeccCCh---hhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCC
Q 011766 234 DRLLLETRDMAREFKTGIHMHVAEIP---YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGV 310 (478)
Q Consensus 234 ~~~l~~~~~~a~~~~~~v~~H~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~ 310 (478)
.+.+.+.+++|+++++++.+|+.... ...+ ..+++...+....+.++.|+ +.+.++++.+.|.
T Consensus 109 ~~~f~~ql~lA~e~~lPv~iH~r~~~~~~a~~~-----------~~~il~~~~~~~~~~vi~H~---~~~~a~~~l~~G~ 174 (261)
T 3guw_A 109 IEVLKSQLELAKRMDVPCIIHTPRGNKLKATRK-----------TLEILESLDFPADLAVIDHV---NFETLDMVLETEY 174 (261)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCSSSTTHHHHH-----------HHHHHHHTTCCTTSEEEESC---CTTTHHHHHTSSS
T ss_pred HHHHHHHHHHHHHhCCeEEEEcCCCcccchHHH-----------HHHHHHHcCCCCCCEEEEeC---CHHHHHHHHhCCE
Confidence 44677888999999999999996531 1111 33455555443344567798 6788889999999
Q ss_pred eEEEC--ccchhhccCCCcHHHHHHC-C-CcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 011766 311 KVSHC--PASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 386 (478)
Q Consensus 311 ~~~~~--p~~~~~~~~~~~~~~~~~~-g-v~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al 386 (478)
.+.+. |..... ...+++++. + -++.+.||++...+ .+..-.+....+. . -.|++. ..
T Consensus 175 yis~~~~pg~~t~----~~~~~~v~~ipldrlLlETD~P~~pn--~P~~v~~~~~~la-----~------~~g~~~--v~ 235 (261)
T 3guw_A 175 WIGLTVQPGKLSA----EDAARIVAEHGPERFMLNSDAGYRDV--EITTVAEAAVKIE-----E------AVGREE--ME 235 (261)
T ss_dssp EEEEECC-----------CCTTGGGGCC-CCEEEECCCCCC--------CCCCTTHHH-----H------HCTTGG--GG
T ss_pred EEEecCCCCcccH----HHHHHHHHhCCcceEEEecCCCCCCC--CHHHHHHHHHHHH-----h------hCChhH--HH
Confidence 88776 221111 111233322 2 46899999864211 0100000000000 0 013554 67
Q ss_pred HHHhHHHHHHcCCCC
Q 011766 387 RMATINGAKSVLWDN 401 (478)
Q Consensus 387 ~~~T~~pA~~lgl~~ 401 (478)
+..+.|+.+++++..
T Consensus 236 ~~~~~Na~rlf~~~~ 250 (261)
T 3guw_A 236 KVARENARKFLRVLE 250 (261)
T ss_dssp HHHHSSHHHHTTC--
T ss_pred HHHHHHHHHHHCCCc
Confidence 788899999999854
No 96
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=97.04 E-value=0.062 Score=48.17 Aligned_cols=134 Identities=9% Similarity=-0.008 Sum_probs=77.0
Q ss_pred CHHHHHHHHHHHHHc-CCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCCh-hHHHHHHh-cC
Q 011766 233 TDRLLLETRDMAREF-KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-TEIGLLSR-AG 309 (478)
Q Consensus 233 ~~~~l~~~~~~a~~~-~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~-~~~~~~~~-~~ 309 (478)
..+.+....++|.++ |+++.+|......... .. ....++.... ..+.++.|+..... +.++.+.+ .|
T Consensus 128 ~~~~~~~~~~~a~~~~~lpv~iH~~~~~~~~~-~~-------~~~~~l~~~p--~l~iv~~H~G~~~~~~~~~~~~~~~~ 197 (272)
T 3cjp_A 128 QIKSLKPIFKYSMDSGSLPIWIHAFNPLVLQD-IK-------EIAELCKAFP--KVPVILGHMGGSNWMTAVELAKEIQN 197 (272)
T ss_dssp CGGGGHHHHHHHHHTTCCCEEECCSTTCCHHH-HH-------HHHHHHHHST--TSCEEEGGGGGGGHHHHHHHHHHCTT
T ss_pred ccHHHHHHHHHHHhccCCcEEEeCCCCCcccc-HH-------HHHHHHHHCC--CceEEEECCCCccHHHHHHHHHhCCC
Confidence 446788899999999 9999999974211000 00 0223444432 23466777765432 23333443 46
Q ss_pred CeEEECccchhhccCCCcHHHHHH-CCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHH
Q 011766 310 VKVSHCPASAMRMLGFAPIKEMLH-ADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 388 (478)
Q Consensus 310 ~~~~~~p~~~~~~~~~~~~~~~~~-~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~ 388 (478)
+.+.++..... ..++.+++ .+-++.+|||++.. .+....... .. .++|.++.-+.
T Consensus 198 ~y~~~s~~~~~-----~~~~~~~~~~~dril~gSD~P~~----~~~~~~~~~--~~-------------~~l~~~~~~~i 253 (272)
T 3cjp_A 198 LYLDTSAYFST-----FVLKIVINELPLKCIFGTDMPFG----DLQLSIEAI--KK-------------MSNDSYVANAV 253 (272)
T ss_dssp EEEECTTCSCH-----HHHHHHHHHSTTTEECCCCTTSS----CHHHHHHHH--HH-------------HCSSHHHHHHH
T ss_pred EEEEecccccH-----HHHHHHHHhCCCeEEEeCCCCCC----ChHHHHHHH--Hh-------------cCCCHHHHHHH
Confidence 66665433211 12344443 35789999998643 222211111 11 14899999999
Q ss_pred HhHHHHHHcCCC
Q 011766 389 ATINGAKSVLWD 400 (478)
Q Consensus 389 ~T~~pA~~lgl~ 400 (478)
...|++++++++
T Consensus 254 ~~~Na~rl~~l~ 265 (272)
T 3cjp_A 254 LGDNISRLLNIE 265 (272)
T ss_dssp HTHHHHHHHTC-
T ss_pred HHHHHHHHhCcc
Confidence 999999999984
No 97
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=96.97 E-value=0.0084 Score=55.61 Aligned_cols=142 Identities=6% Similarity=-0.036 Sum_probs=74.5
Q ss_pred CCHHHHHHHHHHHHHcCCceeEeccCChhhhH-HH---hhhcC--CC--Cc---------hHHHHhhhCCCCCCeeeeee
Q 011766 232 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQ-VV---MDTRK--VD--HG---------TVTFLDKIEFLQNNLLSAHT 294 (478)
Q Consensus 232 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~-~~---~~~~~--~~--~~---------~~~~l~~~~~~~~~~~i~h~ 294 (478)
...+.+....++|.++|++|.+|......... .. ..... .. .. ...++... ...+.++.|+
T Consensus 142 ~~~~~~~~~~~~a~~~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~--P~l~~v~~H~ 219 (327)
T 2dvt_A 142 YDLPQYRPFWGEVEKLDVPFYLHPRNPLPQDSRIYDGHPWLLGPTWAFAQETAVHALRLMASGLFDEH--PRLNIILGHM 219 (327)
T ss_dssp TTSGGGHHHHHHHHHHTCCEEEECCCCCGGGCGGGTTCGGGSGGGTHHHHHHHHHHHHHHHTTHHHHC--TTCCEEESGG
T ss_pred CCCcchHHHHHHHHHcCCeEEECCCCCCcchhhhhccchhhhcccccccHHHHHHHHHHHHcCcHhhC--CCCeEEEecc
Confidence 44567888999999999999999864321100 00 00000 00 00 00122322 2235778898
Q ss_pred ccCChhHHHHHH----------------------hcCCeEEECccchhhccCCCcHHHHHHC-C-CcEEEcCCCCCCCCC
Q 011766 295 VWVNHTEIGLLS----------------------RAGVKVSHCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNNR 350 (478)
Q Consensus 295 ~~~~~~~~~~~~----------------------~~~~~~~~~p~~~~~~~~~~~~~~~~~~-g-v~v~~gsD~~~~~~~ 350 (478)
...-+..+.++. +.|+.+.+..... ...++.+++. | -++.+|||++..
T Consensus 220 gg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~y~~~sg~~~-----~~~~~~~~~~~g~dril~gSD~P~~--- 291 (327)
T 2dvt_A 220 GEGLPYMMWRIDHRNAWVKLPPRYPAKRRFMDYFNENFHITTSGNFR-----TQTLIDAILEIGADRILFSTDWPFE--- 291 (327)
T ss_dssp GTTHHHHHHHHHHTTTTCCSCCSSSCSSCHHHHHHHHEEEECTTCCC-----HHHHHHHHTTTCGGGEECCCCTTTS---
T ss_pred cccHHHHHHHHHhhhhhccccccCCCCCCHHHHHhhcEEEeccCCCC-----HHHHHHHHHHhCcccEEEecCCCCc---
Confidence 642222222221 1233333332110 1234555544 4 589999999643
Q ss_pred cCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 011766 351 MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLW 399 (478)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl 399 (478)
.+...+.. ... .+++.++.-+..+.|+++++++
T Consensus 292 -~~~~~~~~---~~~------------~~l~~~~~~~i~~~Na~rl~~l 324 (327)
T 2dvt_A 292 -NIDHASDW---FNA------------TSIAEADRVKIGRTNARRLFKL 324 (327)
T ss_dssp -CHHHHHHH---HHH------------SSSCHHHHHHHHTHHHHHHTTC
T ss_pred -cHHHHHHH---HHH------------CCCCHHHHHHHHHHhHHHHhCC
Confidence 22221111 111 1489999999999999999998
No 98
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=96.95 E-value=0.027 Score=51.57 Aligned_cols=142 Identities=15% Similarity=0.055 Sum_probs=78.4
Q ss_pred cCCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCC----------hh
Q 011766 231 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN----------HT 300 (478)
Q Consensus 231 ~~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~----------~~ 300 (478)
....+.+..+.+.+.+ |+.+.+|+....-. . ....+... ..++++.|+.... .+
T Consensus 134 ~~~~~~~~~~~~~l~~-gl~v~l~~~~~~l~-~-----------l~~~~~~~---~~~iVidH~G~p~~~~g~~~~~~~~ 197 (303)
T 4d9a_A 134 DAPKDKFLEVAGRLPA-GWHVVIYFEADILE-E-----------LRPFMDAI---PVPIVIDHMGRPDVRQGPDGADMKA 197 (303)
T ss_dssp CCCHHHHHHHHTSCCT-TCEEEEECCGGGHH-H-----------HHHHHHHC---SSCEEEGGGGCCCGGGCTTSHHHHH
T ss_pred ccCHHHHHHHHHHHhc-CCEEEEecccccHH-H-----------HHHHHHHC---CCcEEEeCCCCCCcccCCCCHHHHH
Confidence 4567788888998888 99999998643211 0 22333333 4678888987643 23
Q ss_pred HHHHHHh-cCCeEEECccchhhccC-----CCc-HHHHHHCC-CcEEEcCCCCCCCCCc---CHHHHHHHHHHHhccccc
Q 011766 301 EIGLLSR-AGVKVSHCPASAMRMLG-----FAP-IKEMLHAD-ICVSLGTDGAPSNNRM---SIVDEMYLASLINKGREV 369 (478)
Q Consensus 301 ~~~~~~~-~~~~~~~~p~~~~~~~~-----~~~-~~~~~~~g-v~v~~gsD~~~~~~~~---~~~~~~~~~~~~~~~~~~ 369 (478)
.++.+++ -++.+.++-.......+ ..+ ++.+++.+ -++.+|||++...... +....+.....
T Consensus 198 ~~~l~~~~~NV~vKlSg~~~~~~~~~~~~~~~~~~~~~~~~~~dRlmfGSDwP~~~~~~~~~~~~~~~~~~~~------- 270 (303)
T 4d9a_A 198 FRRLLDSREDIWFKATCPDRLDPAGPPWDDFARSVAPLVADYADRVIWGTAWPHPNMQDAIPDDGLVVDMIPR------- 270 (303)
T ss_dssp HHHHHHHCTTEEEECCCHHHHCTTCTTCHHHHHHHHHHHHHTTTSEECCCCTTCTTCTTSCCCHHHHHHTHHH-------
T ss_pred HHHHHhhCCCEEEEeeCceecCCCCCCHHHHHHHHHHHHHhCcccEEEecCCCCcccccCCCCHHHHHHHHHH-------
Confidence 3455555 45555544221111011 111 34555554 5799999997653221 12111111110
Q ss_pred ccCCCCCCCCC-CHHHHHHHHhHHHHHHcCCCCCcc
Q 011766 370 FANGTTDPAAL-PAETVLRMATINGAKSVLWDNDIG 404 (478)
Q Consensus 370 ~~~~~~~~~~l-s~~~al~~~T~~pA~~lgl~~~~G 404 (478)
.+ +.++.=+..-.|+++++++...-|
T Consensus 271 ---------~~~~~~~~~~il~~NA~rly~~~~~~~ 297 (303)
T 4d9a_A 271 ---------IAPTPELQHKMLVTNPMRLYWSEEMEG 297 (303)
T ss_dssp ---------HSCSHHHHHHHHTHHHHHHHCGGGC--
T ss_pred ---------HCCCHHHHHHHHHHHHHHHhCCCcccc
Confidence 13 455555678899999999865434
No 99
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=96.76 E-value=0.054 Score=49.19 Aligned_cols=147 Identities=12% Similarity=0.043 Sum_probs=78.6
Q ss_pred CCHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhH-HHHHHh-cC
Q 011766 232 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE-IGLLSR-AG 309 (478)
Q Consensus 232 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~-~~~~~~-~~ 309 (478)
...+.+....+.|.++|++|.+|......... . .........++... ...+.++.|+.....++ ++.+.+ .+
T Consensus 135 ~~d~~~~~~~~~a~e~glpv~iH~~~~~~~~~---~-~~~p~~~~~v~~~~--P~l~ivl~H~G~~~~~~~~~l~~~~~n 208 (291)
T 3irs_A 135 VDDRRLYPLYAFCEDNGIPVIMMTGGNAGPDI---T-YTNPEHIDRVLGDF--PDLTVVSSHGNWPWVQEIIHVAFRRPN 208 (291)
T ss_dssp TTCGGGHHHHHHHHHTTCCEEEECSSSCSSSG---G-GGCHHHHHHHHHHC--TTCCEEEEGGGTTCHHHHHHHHHHCTT
T ss_pred CCCHHHHHHHHHHHHcCCeEEEeCCCCCCCCC---c-cCCHHHHHHHHHHC--CCCEEEeecCCcccHHHHHHHHhHCCC
Confidence 34567888999999999999999976411000 0 00000022334433 23457789987543333 333323 35
Q ss_pred CeEEECccchhhccCCCcHHHHHH-CC-CcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHH
Q 011766 310 VKVSHCPASAMRMLGFAPIKEMLH-AD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLR 387 (478)
Q Consensus 310 ~~~~~~p~~~~~~~~~~~~~~~~~-~g-v~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~ 387 (478)
+.+.+.-... .......+.++++ .| -++.+|||++.. .+...+. ... +.++|.++.-+
T Consensus 209 vy~~~Sg~~~-~~~~~~~~~~~~~~~g~drllfgSD~P~~----~~~~~~~---~~~------------~l~l~~e~~~~ 268 (291)
T 3irs_A 209 LYLSPDMYLY-NLPGHADFIQAANSFLADRMLFGTAYPMC----PLKEYTE---WFL------------TLPIKPDAMEK 268 (291)
T ss_dssp EEEECGGGGS-SSTTHHHHHHHHTTGGGGTBCCCCCBTSS----CHHHHHH---HHH------------TSSCCHHHHHH
T ss_pred eEecHHHHhc-cCCCHHHHHHHHHHhCcceEEEecCCCCC----CHHHHHH---HHH------------HCCCCHHHHHH
Confidence 5554322111 0011123334443 23 368899998643 2322111 111 11589999999
Q ss_pred HHhHHHHHHcCCCCCcc
Q 011766 388 MATINGAKSVLWDNDIG 404 (478)
Q Consensus 388 ~~T~~pA~~lgl~~~~G 404 (478)
....|+++++++..+-|
T Consensus 269 i~~~NA~rl~~~~~~~~ 285 (291)
T 3irs_A 269 ILHGNAERLLAQAGREG 285 (291)
T ss_dssp HHTHHHHHHHHHSCC--
T ss_pred HHHHHHHHHhCcccccc
Confidence 99999999999976655
No 100
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=96.45 E-value=0.037 Score=50.62 Aligned_cols=144 Identities=11% Similarity=-0.003 Sum_probs=74.4
Q ss_pred CHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcC-----CC-Cch--------HHHHhhhCCCCCCeeeeeeccCC
Q 011766 233 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK-----VD-HGT--------VTFLDKIEFLQNNLLSAHTVWVN 298 (478)
Q Consensus 233 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~-----~~-~~~--------~~~l~~~~~~~~~~~i~h~~~~~ 298 (478)
..+.+....++|.++|+++.+|...............+ .. ... ..++.... ..+.++.|+...-
T Consensus 133 ~~~~~~~~~~~a~~~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~P--~l~~v~~H~gg~~ 210 (307)
T 2f6k_A 133 GSPVLERVYQELDARQAIVALHPNEPAILPKNVDIDLPVPLLGFFMDTTMTFINMLKYHFFEKYP--NIKVIIPHAGAFL 210 (307)
T ss_dssp TCGGGHHHHHHHHTTTCEEEEECCCCSCCCTTSSTTCCHHHHHHHHHHHHHHHHHHHTTHHHHCT--TCEEEESGGGTTH
T ss_pred CcHhHHHHHHHHHHcCCeEEECCCCCccccccccccccchhccchHHHHHHHHHHHhcCccccCC--CCeEEccCCCccc
Confidence 44678888999999999999999754321000000000 00 000 01223321 2356788886421
Q ss_pred hh---------------HHHHHHhcCCeEEECccchhhccCCCcHHHHHHC-C-CcEEEcCCCCCCCCCcCHHHHHHHHH
Q 011766 299 HT---------------EIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNNRMSIVDEMYLAS 361 (478)
Q Consensus 299 ~~---------------~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-g-v~v~~gsD~~~~~~~~~~~~~~~~~~ 361 (478)
+. .+....+ ++.+.++.... ...++.+++. | -++.+|||++... +........
T Consensus 211 p~~~~~~~~~~~~~~~~~~~~~~~-n~y~~~s~~~~-----~~~l~~~~~~~g~drll~gSD~P~~~----~~~~~~~~~ 280 (307)
T 2f6k_A 211 GIVDDRIAQYAQKVYQVDVYDVMH-HVYFDVAGAVL-----PRQLPTLMSLAQPEHLLYGSDIPYTP----LDGSRQLGH 280 (307)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHHH-HSEEECCSSCT-----TTHHHHHTTTSCGGGEECCCCTTTSC----HHHHHHHHH
T ss_pred hhhHHHHHhhccccCcccHHHHHh-heEEeccCCCC-----HHHHHHHHHhcCcccEEEecCCCCCC----chhHHHHHH
Confidence 21 1222223 56555443311 2345556554 3 4799999996531 211111111
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 011766 362 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLW 399 (478)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl 399 (478)
.+.. ..++|.++.-+....|+++++++
T Consensus 281 ~l~~-----------~~~l~~~~~~~i~~~Na~rl~~~ 307 (307)
T 2f6k_A 281 ALAT-----------TDLLTNEQKQAIFYDNAHRLLTE 307 (307)
T ss_dssp HHHH-----------CTTSCHHHHHHHHTHHHHHHHHC
T ss_pred HHhh-----------ccCCCHHHHHHHHHHHHHHHhCc
Confidence 1110 01489999888899999998864
No 101
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=96.23 E-value=0.094 Score=47.88 Aligned_cols=139 Identities=12% Similarity=-0.054 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCCh--------------h
Q 011766 235 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH--------------T 300 (478)
Q Consensus 235 ~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~--------------~ 300 (478)
+.+...++.+.++|+++.+|....... . ....+... ...+.++.|+..... +
T Consensus 122 ~~~~~~~~~~~~~glpv~ih~~~~~l~-~-----------l~~ll~~~--P~l~iVi~H~G~p~~~~~~~~~~~~~~w~~ 187 (303)
T 4do7_A 122 ADFARGVAWLQANDYVYDVLVFERQLP-D-----------VQAFCARH--DAHWLVLDHAGKPALAEFDRDDTALARWRA 187 (303)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCGGGHH-H-----------HHHHHHHC--CSSCEEEGGGGCCCGGGCC---CHHHHHHH
T ss_pred HHHHHHHHHHHHCCCeEEEecCHHHHH-H-----------HHHHHHHC--CCCCEEEeCCCCCCccccccccchHHHHHH
Confidence 457788899999999999998753210 0 12233332 235678888876431 2
Q ss_pred HHHHHHhc-CCeEEECccchhhc----------cCC-CcHHHHHHC-C-CcEEEcCCCCCCCCCcCHHHHHHHHHH-Hhc
Q 011766 301 EIGLLSRA-GVKVSHCPASAMRM----------LGF-APIKEMLHA-D-ICVSLGTDGAPSNNRMSIVDEMYLASL-INK 365 (478)
Q Consensus 301 ~~~~~~~~-~~~~~~~p~~~~~~----------~~~-~~~~~~~~~-g-v~v~~gsD~~~~~~~~~~~~~~~~~~~-~~~ 365 (478)
.+..+++. ++.+.++-...... ... +-++.+++. | -++.+|||++......++-..+..... ..
T Consensus 188 ~l~~la~~~nv~~klSg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~dri~fgSD~P~~~~~~~~~~~~~~~~~~~~- 266 (303)
T 4do7_A 188 ALRELAALPHVVCKLSGLVTEADWRRGLRASDLRHIEQCLDAALDAFGPQRLMFGSDWPVCLLAASYDEVASLVERWAE- 266 (303)
T ss_dssp HHHHHHTSTTEEEEECSCGGGSCTTTCCCHHHHHHHHHHHHHHHHHHCGGGEEECCCBTGGGGTCCHHHHHHHHHHHHH-
T ss_pred HHHHHHhCCCEEEEeCCccccccccccccCCCHHHHHHHHHHHHHHhCcccEEEeCCCCCCcCcCCHHHHHHHHHHHHh-
Confidence 34445544 55555442211100 000 113344433 4 589999998654222222111111110 10
Q ss_pred ccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 011766 366 GREVFANGTTDPAALPAETVLRMATINGAKSVLWD 400 (478)
Q Consensus 366 ~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~ 400 (478)
.++|.++.=+....|+++++|++
T Consensus 267 ------------~~l~~~~~~~i~~~Na~rl~~l~ 289 (303)
T 4do7_A 267 ------------SRLSAAERSALWGGTAARCYALP 289 (303)
T ss_dssp ------------HHCCHHHHHHHTTHHHHHHTTCC
T ss_pred ------------cCCCHHHHHHHHHHHHHHHhCCC
Confidence 03788888888899999999994
No 102
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=96.03 E-value=0.34 Score=42.99 Aligned_cols=83 Identities=12% Similarity=0.048 Sum_probs=47.7
Q ss_pred hHHHHHHhcCCeEEECccchhhcc---CCCcHHHHHHCCCcEEEcCCCCCCC-CCcCHHHHHHHHHHHhcccccccCCCC
Q 011766 300 TEIGLLSRAGVKVSHCPASAMRML---GFAPIKEMLHADICVSLGTDGAPSN-NRMSIVDEMYLASLINKGREVFANGTT 375 (478)
Q Consensus 300 ~~~~~~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~gv~v~~gsD~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (478)
+.+..+++.|+.+.+...+..... .....+.+++.|+.+++|||..... ....+.+.+......
T Consensus 148 ~~l~~l~~~G~~iEiN~~s~~g~~g~~~~~~~~~~~~~gl~~~igSDaH~~~~r~~~~~~a~~~l~~~------------ 215 (262)
T 3qy7_A 148 SLLYHLVEKGAASQITSGSLAGIFGKQLKAFSLRLVEANLIHFVASDAHNVKTRNFHTQEALYVLEKE------------ 215 (262)
T ss_dssp HHHHHHHHTTCEEEEEHHHHHTTTCHHHHHHHHHHHHTTCCCEEECCBCSSSSSCCCHHHHHHHHHHH------------
T ss_pred HHHHHHHHCCCEEEEECCccCcccchHHHHHHHHHHhCCCeEEEEccCCCCCCCCchHHHHHHHHHHH------------
Confidence 557788888876655433321111 1224567888999999999964332 233444433332110
Q ss_pred CCCCCCHHHHHHHHhHHHHHHcCC
Q 011766 376 DPAALPAETVLRMATINGAKSVLW 399 (478)
Q Consensus 376 ~~~~ls~~~al~~~T~~pA~~lgl 399 (478)
+....|-+ ...||.++++-
T Consensus 216 ----~G~~~a~~-~~~n~~~il~~ 234 (262)
T 3qy7_A 216 ----FGSELPYM-LTENAELLLRN 234 (262)
T ss_dssp ----HCSHHHHH-HHHHHHHHHTT
T ss_pred ----hCHHHHHH-HHHHHHHHHCC
Confidence 22344444 56899999964
No 103
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=94.80 E-value=0.44 Score=44.81 Aligned_cols=93 Identities=13% Similarity=0.106 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHc----CCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCC-------------------------CC
Q 011766 236 LLLETRDMAREF----KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEF-------------------------LQ 286 (478)
Q Consensus 236 ~l~~~~~~a~~~----~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------------------------~~ 286 (478)
.+.+-+++|.++ +++|.+|.-...... .+++..... ..
T Consensus 180 ~F~~QL~LA~e~~~~~~lPv~IH~R~A~~d~-------------l~iL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (401)
T 3e2v_A 180 FFEEQLKISCLNDKLSSYPLFLHMRSACDDF-------------VQILERFVVGFTDEKDTFQLQKLGASSSSGFYKFHP 246 (401)
T ss_dssp HHHHHHHHTTSSHHHHTSCEEEEEESCHHHH-------------HHHHHHHHHCEECSSCTTCGGGC--CCTTCEECCCT
T ss_pred HHHHHHHHHHhhhccCCCeEEEEecchHHHH-------------HHHHHHhhccccccccccccccccccccccccccCC
Confidence 355667899999 999999997644332 122222110 01
Q ss_pred CCeeeeeeccCChhHHHHHHhcC--CeEEECccchhhccCCCcHHHHHHC-C-CcEEEcCCCC
Q 011766 287 NNLLSAHTVWVNHTEIGLLSRAG--VKVSHCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGA 345 (478)
Q Consensus 287 ~~~~i~h~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~-g-v~v~~gsD~~ 345 (478)
....+.||..=+.++++++.+.| ..+.+.... ++. ... .+++.. . -.+.+=||++
T Consensus 247 ~~~~V~H~FsGs~e~a~~~l~lG~~~yis~~g~~-~k~--~~~-~e~v~~iPldrLLlETDaP 305 (401)
T 3e2v_A 247 DRKLVVHSFTGSAIDLQKLLNLSPNIFIGVNGCS-LRT--EEN-LAVVKQIPTERLLLETDAP 305 (401)
T ss_dssp TCCEEECSCCCCHHHHHHHHHHCTTEEEEECGGG-GSS--HHH-HHHHHTSCGGGEEECCCTT
T ss_pred CCcEEEEcCCCCHHHHHHHHhCCCCEEEEeCCEe-cCC--HHH-HHHHHhCCchhEEEecCCC
Confidence 12457899999999999999999 888877642 211 111 123322 1 2477788876
No 104
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=94.56 E-value=1.7 Score=38.03 Aligned_cols=84 Identities=12% Similarity=0.110 Sum_probs=46.3
Q ss_pred hhHHHHHHhcCCeEEECccch--hhccC------CCcHHHHHHCCCcEEEcCCCCCCCC-CcCHHHHHHHHHHHhccccc
Q 011766 299 HTEIGLLSRAGVKVSHCPASA--MRMLG------FAPIKEMLHADICVSLGTDGAPSNN-RMSIVDEMYLASLINKGREV 369 (478)
Q Consensus 299 ~~~~~~~~~~~~~~~~~p~~~--~~~~~------~~~~~~~~~~gv~v~~gsD~~~~~~-~~~~~~~~~~~~~~~~~~~~ 369 (478)
++.+..+++.|+.+.+...+. ....+ ..-++.+.+.|+.+++|||...... ...+-.........
T Consensus 151 ~~~l~~l~~~G~~lEiN~~s~~~~~~~g~~~~~~~~~~~~~~~~gl~~~~GSDaH~~~~~~~~~~~a~~~l~~~------ 224 (247)
T 2wje_A 151 EKRVRELIDMGCYTQVNSSHVLKPKLFGERYKFMKKRAQYFLEQDLVHVIASDMHNLDGRPPHMAEAYDLVTQK------ 224 (247)
T ss_dssp HHHHHHHHHTTCEEEEEHHHHSCCCSSCCSCHHHHHHHHHHHHTTCCSEEECCBCCSSSSCCCHHHHHHHHHHH------
T ss_pred HHHHHHHHHCCCEEEEecHhhHhcCCCCCcChHHHHHHHHHHHCCCeEEEEeCCCCCcccChhHHHHHHHHHHH------
Confidence 567788888888766554332 11111 1123455689999999999754321 12222222221110
Q ss_pred ccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 011766 370 FANGTTDPAALPAETVLRMATINGAKSVL 398 (478)
Q Consensus 370 ~~~~~~~~~~ls~~~al~~~T~~pA~~lg 398 (478)
+..+.+-.+...||.+++.
T Consensus 225 ----------~G~~~~~~l~~~n~~~i~~ 243 (247)
T 2wje_A 225 ----------YGEAKAQELFIDNPRKIVM 243 (247)
T ss_dssp ----------HCHHHHHHHHTHHHHHHHT
T ss_pred ----------hCHHHHHHHHHHHHHHHHc
Confidence 2355555555579988874
No 105
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=92.28 E-value=0.26 Score=42.17 Aligned_cols=87 Identities=8% Similarity=-0.044 Sum_probs=56.4
Q ss_pred ChhHHHHHHhcCCeEEECccchhhc------cCCCc----HHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhccc
Q 011766 298 NHTEIGLLSRAGVKVSHCPASAMRM------LGFAP----IKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGR 367 (478)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~p~~~~~~------~~~~~----~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~ 367 (478)
+.+.++.+++.|+.+.++.....+. ....+ ++...+.|+++.++||......-.++......+..
T Consensus 113 ~~~~a~~A~e~gv~lEIn~s~~~~~~~~~R~~~~~~~~~il~l~k~~g~~ivisSDAh~~~~v~~~~~~~~l~~~----- 187 (212)
T 1v77_A 113 DHVLAKLMVKKNVALGFSLRPLLYSNPYERANLLRFMMKAWKLVEKYKVRRFLTSSAQEKWDVRYPRDLISLGVV----- 187 (212)
T ss_dssp CHHHHHHHHHHTCEEEEESHHHHHSCHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSSGGGCCCHHHHHHHHHH-----
T ss_pred CHHHHHHHHHCCeEEEEECcHHhcCCcchHHHHHHHHHHHHHHHHhcCCCEEEeCCCCChhhcCCHHHHHHHHHH-----
Confidence 4577888899999999887654322 11222 33345679999999997543211233333333221
Q ss_pred ccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 011766 368 EVFANGTTDPAALPAETVLRMATINGAKSVLW 399 (478)
Q Consensus 368 ~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl 399 (478)
-|++.+++..+.|.+|.+++..
T Consensus 188 ----------~G~~~e~~~~~l~~~~~~i~~~ 209 (212)
T 1v77_A 188 ----------IGMEIPQAKASISMYPEIILKR 209 (212)
T ss_dssp ----------TTCCHHHHHHTTTHHHHHHHC-
T ss_pred ----------cCCCHHHHHHHHHHHHHHHHHh
Confidence 2699999999999999998864
No 106
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=91.33 E-value=3.8 Score=37.90 Aligned_cols=147 Identities=12% Similarity=0.047 Sum_probs=73.4
Q ss_pred CCHHHHHHHHHHHHHcCCceeEeccCChhhh------HHHh-hhcCCCCc-hHHHHhhhCCCCCCeeeeeeccCChhHHH
Q 011766 232 ATDRLLLETRDMAREFKTGIHMHVAEIPYEN------QVVM-DTRKVDHG-TVTFLDKIEFLQNNLLSAHTVWVNHTEIG 303 (478)
Q Consensus 232 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~------~~~~-~~~~~~~~-~~~~l~~~~~~~~~~~i~h~~~~~~~~~~ 303 (478)
...+.+....++|.++|++|.+|........ .... .......- ...++.... ..+.++.|+...-+..+.
T Consensus 156 l~d~~~~p~~~~a~e~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~a~~~li~~~v~~~~P--~l~~vi~H~Gg~~p~~~~ 233 (350)
T 2gwg_A 156 LTDRIWYPIYEKMVELEIPAMIHVSTSCNTCFHTTGAHYLNADTTAFMQCVAGDLFKDFP--ELKFVIPHGGGAVPYHWG 233 (350)
T ss_dssp TTSGGGHHHHHHHHHHTCCEEECCCC---------TTHHHHHHHHHHHHHHHSCHHHHCT--TCCEEESGGGTTTGGGHH
T ss_pred CCCHHHHHHHHHHHHcCCeEEECCCCCCcccccccccccchHHHHHHHHHHhcCccccCC--CCcEEeccCCCcchhhHH
Confidence 4556788899999999999999997542200 0000 00000000 001223222 235788998743222221
Q ss_pred H---------------HHhcCCeEEECccchhhccCCCcHHHHHHC-C-CcEEEcCCCCCCCCCc-----CHHHHHHHHH
Q 011766 304 L---------------LSRAGVKVSHCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNNRM-----SIVDEMYLAS 361 (478)
Q Consensus 304 ~---------------~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-g-v~v~~gsD~~~~~~~~-----~~~~~~~~~~ 361 (478)
+ ....++.+.++.... ..++.+++. | -++.+|||++...... ..+......
T Consensus 234 r~~~~~~~~~~~~l~~~~~~n~y~d~s~~~~------~~l~~l~~~~g~dril~gSD~P~~~~~~~p~~~~~~~~~~~~- 306 (350)
T 2gwg_A 234 RFRGLAQEMKKPLLEDHVLNNIFFDTCVYHQ------PGIDLLNTVIPVDNVLFASEMIGAVRGIDPRTGFYYDDTKRY- 306 (350)
T ss_dssp HHHHHHHHTTCCCHHHHTTTTEEEECCCCSH------HHHHHHHHHSCGGGEECCCCCSSSCCCEETTTTEETTCTHHH-
T ss_pred HHHHHHHhccCCCcHHHHhhcEEEEecccCc------HHHHHHHHHhCcccEEEecCCCCCcccCCcccccchhhHHHH-
Confidence 1 112344444443211 234555543 4 4899999996432110 001111000
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 011766 362 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLW 399 (478)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl 399 (478)
+.. -.++|.++.-+....|+++++++
T Consensus 307 -l~~-----------~~~l~~~~~~~i~~~NA~rl~~~ 332 (350)
T 2gwg_A 307 -IEA-----------STILTPEEKQQIYEGNARRVYPR 332 (350)
T ss_dssp -HHH-----------CSSSCHHHHHHHHTHHHHHHCHH
T ss_pred -HHh-----------ccCCCHHHHHHHHHHHHHHHHHh
Confidence 100 01489998888999999999975
No 107
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=78.90 E-value=18 Score=32.92 Aligned_cols=27 Identities=15% Similarity=0.025 Sum_probs=23.0
Q ss_pred CCHHHHHHHHHHHHHcCCceeEeccCC
Q 011766 232 ATDRLLLETRDMAREFKTGIHMHVAEI 258 (478)
Q Consensus 232 ~~~~~l~~~~~~a~~~~~~v~~H~~~~ 258 (478)
.+.+.+..+.+++.++|+++.+|....
T Consensus 155 l~d~~~~p~~~~~~e~~lpv~iH~~~~ 181 (334)
T 2hbv_A 155 LDDATLEAFLTHCANEDIPILVHPWDM 181 (334)
T ss_dssp TTSHHHHHHHHHHHHTTCCEEEECCSC
T ss_pred CCcHHHHHHHHHHHHCCCEEEECCCCC
Confidence 455788899999999999999999753
No 108
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=77.71 E-value=16 Score=33.34 Aligned_cols=26 Identities=15% Similarity=0.211 Sum_probs=22.0
Q ss_pred CCHHHHHHHHHHHHHcCCceeEeccC
Q 011766 232 ATDRLLLETRDMAREFKTGIHMHVAE 257 (478)
Q Consensus 232 ~~~~~l~~~~~~a~~~~~~v~~H~~~ 257 (478)
...+.+..+.+++.++|+++.+|...
T Consensus 152 l~d~~~~~~~~~~~e~~lpv~iH~~~ 177 (336)
T 2wm1_A 152 LNAQELFPVYAAAERLKCSLFVHPWD 177 (336)
T ss_dssp TTCGGGHHHHHHHHHHTCEEEEECCS
T ss_pred CCCccHHHHHHHHHHcCCEEEECCCC
Confidence 34567888999999999999999975
No 109
>2qpx_A Predicted metal-dependent hydrolase of the TIM-BA; YP_805737.1, putative metal-dependent hydrolase; HET: KCX MSE; 1.40A {Lactobacillus casei}
Probab=69.79 E-value=22 Score=33.05 Aligned_cols=148 Identities=9% Similarity=0.000 Sum_probs=71.0
Q ss_pred HHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHh--cCCeEEECc
Q 011766 239 ETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSR--AGVKVSHCP 316 (478)
Q Consensus 239 ~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~--~~~~~~~~p 316 (478)
.+++.+.++|+++.+|.......... ..........++........+.++.||. ....++..+.+ .++.+.+..
T Consensus 213 ~~~e~a~e~glpv~iH~g~~d~~~~~---~~~~p~~l~~ll~~~~~P~lkiVl~Hg~-~~~~~~~~l~~~~~nvy~d~s~ 288 (376)
T 2qpx_A 213 HVAPFIIAQDMPLQFHVGYGDADTDM---YLGNPLLMRDYLKAFTKKGLKVVLLHCY-PYHREAGYLASVFPNLYFDISL 288 (376)
T ss_dssp HHHHHHHHHTCCEEEEESCCCTTSCG---GGCCGGGGHHHHHHHGGGTCCEEEEECT-TCHHHHHHHHHHSTTEEEECTT
T ss_pred HHHHHHHHCCCeEEEEeCCCCCCCCc---cccCHHHHHHHHhcCCCCCCcEEEECCC-ccHHHHHHHHHhCCCEEEeccc
Confidence 44589999999999999752110000 0000011234444112233468899943 33344555554 466565543
Q ss_pred cchhhc--cCCCcHHHHHHCC--CcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCCCCCCCCCHHH-----HHH
Q 011766 317 ASAMRM--LGFAPIKEMLHAD--ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAET-----VLR 387 (478)
Q Consensus 317 ~~~~~~--~~~~~~~~~~~~g--v~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~-----al~ 387 (478)
..... .....++.+++.. -++.+|||++... ................. . .+.+++.++ .-+
T Consensus 289 -~~~~~~~~~~~~l~~l~~~~g~dRiLfGSD~P~~~-e~~~~~~~~~~~~l~~l---~-----~~~~ls~~~~~~~~~~~ 358 (376)
T 2qpx_A 289 -LDNLGPSGASRVFNEAVELAPYTRILFASDASTYP-EMYGLAARQFKQALVAH---F-----NQLPFVDLAQKKAWINA 358 (376)
T ss_dssp -HHHHSGGGHHHHHHHHTSSSCGGGEECCCCCCBSH-HHHHHHHHHHHHHHHHH---H-----HTCSSCCHHHHHHHHHH
T ss_pred -ccccChhhHHHHHHHHHHhcCCCCEEEECCCCccc-hhhcccHHHHHHHHHHH---H-----cccCcchhhcCHHHHHH
Confidence 11110 0112345555543 4789999986431 00001110000111000 0 001355555 666
Q ss_pred HHhHHHHHHcCCC
Q 011766 388 MATINGAKSVLWD 400 (478)
Q Consensus 388 ~~T~~pA~~lgl~ 400 (478)
....|++++++++
T Consensus 359 I~~~NA~rlf~l~ 371 (376)
T 2qpx_A 359 ICWQTSAKLYHQE 371 (376)
T ss_dssp HHTHHHHHHTTCG
T ss_pred HHHHhHHHHhCCC
Confidence 7889999999883
No 110
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=65.68 E-value=85 Score=29.00 Aligned_cols=132 Identities=12% Similarity=0.009 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHcCCceeE-eccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeee---------eeccCChhHHHHH
Q 011766 236 LLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSA---------HTVWVNHTEIGLL 305 (478)
Q Consensus 236 ~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~---------h~~~~~~~~~~~~ 305 (478)
.-+++++...+.|+.+.+ |+.+.. ..+ .++.. ...++.+ |.-.+++++++.+
T Consensus 179 ~G~~vV~emnrlGmivDlSH~s~~~-~~d--------------vl~~s---~~PviaSHSn~ral~~h~RNl~De~l~~l 240 (369)
T 1itu_A 179 FGQRVVKELNRLGVLIDLAHVSVAT-MKA--------------TLQLS---RAPVIFSHSSAYSVCASRRNVPDDVLRLV 240 (369)
T ss_dssp HHHHHHHHHHHHTCEEECTTBCHHH-HHH--------------HHHHC---SSCCEESSCCBTTTSCCTTSBCHHHHHHH
T ss_pred hHHHHHHHHHHcCCEEEcCCCCHHH-HHH--------------HHHhc---CCCEEEeCCChhhcCCCCCCCCHHHHHHH
Confidence 456677778888988865 554422 111 11111 1223334 4446789999999
Q ss_pred HhcCCeEEECccchhhc-cCCCcHHHHHH--------CCC-cEEEcCCCCCC--CC----CcCHHHHHHHHHHHhccccc
Q 011766 306 SRAGVKVSHCPASAMRM-LGFAPIKEMLH--------ADI-CVSLGTDGAPS--NN----RMSIVDEMYLASLINKGREV 369 (478)
Q Consensus 306 ~~~~~~~~~~p~~~~~~-~~~~~~~~~~~--------~gv-~v~~gsD~~~~--~~----~~~~~~~~~~~~~~~~~~~~ 369 (478)
++.|..+-++....+-. .....+..+.+ .|+ .|.+|||.... .. ...-+..+... +..
T Consensus 241 a~~GGvigv~~~~~fl~~~~~~t~~~~~~hi~hi~~~~G~dhVgiGsDfdG~~~~p~gl~d~~~~p~l~~~-L~~----- 314 (369)
T 1itu_A 241 KQTDSLVMVNFYNNYISCTNKANLSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEGLEDVSKYPDLIAE-LLR----- 314 (369)
T ss_dssp HHHTCEEEECCCHHHHTSSSCCBHHHHHHHHHHHHHHHCGGGEEECCCTTSCSCCCBTCSSTTCHHHHHHH-HHH-----
T ss_pred HHcCCeEEEEechhhcCCCCCCCHHHHHHHHHHHHHhhCCCeEEECCCCCCCCCCCCCCCCHHHHHHHHHH-HHH-----
Confidence 99998777665433221 12223333222 254 59999996321 10 11122222211 111
Q ss_pred ccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 011766 370 FANGTTDPAALPAETVLRMATINGAKSVLW 399 (478)
Q Consensus 370 ~~~~~~~~~~ls~~~al~~~T~~pA~~lgl 399 (478)
.|+|.+++=+.+-.|..+.+.-
T Consensus 315 --------~G~se~~i~ki~g~N~lRvl~~ 336 (369)
T 1itu_A 315 --------RNWTEAEVKGALADNLLRVFEA 336 (369)
T ss_dssp --------TTCCHHHHHHHHTHHHHHHHHH
T ss_pred --------cCCCHHHHHHHHhHhHHHHHHH
Confidence 2689999999999999998854
No 111
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=61.65 E-value=45 Score=30.93 Aligned_cols=28 Identities=14% Similarity=0.138 Sum_probs=22.9
Q ss_pred CCHHHHHHHHHHHHHcCCceeEeccCCh
Q 011766 232 ATDRLLLETRDMAREFKTGIHMHVAEIP 259 (478)
Q Consensus 232 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~ 259 (478)
.+.+.+..+.+.+.+.|++|.+|.....
T Consensus 188 l~d~~~~pi~~~~~e~g~pV~iH~g~~~ 215 (373)
T 4inf_A 188 LDEEFFDPIFRALVEVDQPLYIHPATSP 215 (373)
T ss_dssp TTSGGGHHHHHHHHHHTCCEEECCCCCC
T ss_pred CCCcchHHHHHHHHHcCCeEEECCCCCC
Confidence 3455788899999999999999997643
No 112
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=49.61 E-value=1.5e+02 Score=26.78 Aligned_cols=92 Identities=12% Similarity=0.048 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHcCCceeE-eccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeec---------cCChhHHHHH
Q 011766 236 LLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV---------WVNHTEIGLL 305 (478)
Q Consensus 236 ~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~---------~~~~~~~~~~ 305 (478)
.=+++++...+.|+.+.+ |+.+... . +.++. ....++++|.. .+++++++.+
T Consensus 140 ~G~~vV~emnrlGmivDlSH~s~~~~-~--------------dvl~~---s~~Pvi~SHsn~~al~~h~RNl~De~iral 201 (325)
T 2i5g_A 140 FGREIVAEMNRVGIMCDLSHVGSKTS-E--------------EVILE---SKKPVCYSHCLPSGLKEHPRNKSDEELKFI 201 (325)
T ss_dssp HHHHHHHHHHHHTCEEECTTBCHHHH-H--------------HHHHH---CSSCCEEEEECBTTTCCCTTSBCHHHHHHH
T ss_pred HHHHHHHHHHHcCcEEEcCcCCHHHH-H--------------HHHHH---hCCCEEEeCCCccccCCCCCCCCHHHHHHH
Confidence 445667777888888765 4443221 1 11221 12345566654 4678999999
Q ss_pred HhcCCeEEECccchhhc-cCCCcHHHHHH--------CC-CcEEEcCCCC
Q 011766 306 SRAGVKVSHCPASAMRM-LGFAPIKEMLH--------AD-ICVSLGTDGA 345 (478)
Q Consensus 306 ~~~~~~~~~~p~~~~~~-~~~~~~~~~~~--------~g-v~v~~gsD~~ 345 (478)
++.|..+-++....+-. .....+..+.+ .| -.|.+|||.+
T Consensus 202 a~~GGvigv~~~~~fl~~~~~~t~~~~~~hi~~i~~~~G~dhVgiGsDf~ 251 (325)
T 2i5g_A 202 ADHGGFVGVTMFAPFLKKGIDSTIDDYAEAIEYVMNIVGEDAIGIGTDFT 251 (325)
T ss_dssp HHTTCEEEECCCGGGSSSGGGCBHHHHHHHHHHHHHHHCTTSEEECCCBC
T ss_pred HHcCCeEEEeecchhcCCCCCCCHHHHHHHHHHHHHhcCCceEEECCcCc
Confidence 99998776654433221 11122222221 24 3699999984
No 113
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=44.66 E-value=1.7e+02 Score=26.06 Aligned_cols=147 Identities=11% Similarity=0.013 Sum_probs=73.2
Q ss_pred CCHHHHHHHHHHHHHcCCceeEeccCChhhhH--HHhhhcCCCCchH------HHHhhhCCCCCCeeeeeeccCChhHHH
Q 011766 232 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQ--VVMDTRKVDHGTV------TFLDKIEFLQNNLLSAHTVWVNHTEIG 303 (478)
Q Consensus 232 ~~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~--~~~~~~~~~~~~~------~~l~~~~~~~~~~~i~h~~~~~~~~~~ 303 (478)
...+.+..+.+.+.+.|++|.+|......... ............. .++.. ..+-+.++.|+...-+-.++
T Consensus 139 l~d~~~~p~~~~~~e~g~pv~iH~g~~~~~p~~~~~~~~~~~~~~~~~~li~~gv~~r--fP~Lkii~~H~Gg~~P~~~~ 216 (312)
T 3ij6_A 139 IADKEFRPVLAQAAKLHVPLWMHPVFDARKPDNNLVFSWEYELSQAMLQLVQSDLFQD--YPNLKILVHHAGAMVPFFSG 216 (312)
T ss_dssp TTSTTTHHHHHHHHHTTCCEEEECCCCTTSSSCCTTTHHHHHHHHHHHHHHHTTHHHH--CTTCCEEESGGGTTTTTSHH
T ss_pred CCCccHHHHHHHHHHcCCeEEEcCCCCCCCCCcccccccHHHHHHHHHHHHHcChHhh--CCCCeEEecCCcccHHHHHH
Confidence 34456788899999999999999864321000 0000000000000 11222 22346788898743332222
Q ss_pred HHH----------hcCCeEEECccchhhccCCCcHHHHHH-CC-CcEEEcCCCCCCCCCcCHHHHHHHHHHHhccccccc
Q 011766 304 LLS----------RAGVKVSHCPASAMRMLGFAPIKEMLH-AD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFA 371 (478)
Q Consensus 304 ~~~----------~~~~~~~~~p~~~~~~~~~~~~~~~~~-~g-v~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (478)
++. -.++.+.+.... ....++.+++ .| -++.+|||++............. ....
T Consensus 217 r~~~~~~~~~~~~~~nvy~dts~~~-----~~~~l~~~~~~~g~drilfgSD~P~~~~p~~~~~~~~--~~l~------- 282 (312)
T 3ij6_A 217 RIDHILDEKHAQDFKKFYVDTAILG-----NTPALQLAIDYYGIDHVLFGTDAPFAVMPSGADQIIT--QAIN------- 282 (312)
T ss_dssp HHHHHSCHHHHHHGGGCEEECCSSS-----CHHHHHHHHHHHCGGGEECCCCBTSSSTTTCSHHHHH--HHHH-------
T ss_pred HHHHhcccchHHHcCeEEEeCCCCC-----CHHHHHHHHHhCCCCeEEEeCCCCCCcCCCcchHHHH--HHHH-------
Confidence 221 123333332111 0112333432 34 47999999865421111111111 1111
Q ss_pred CCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 011766 372 NGTTDPAALPAETVLRMATINGAKSVLW 399 (478)
Q Consensus 372 ~~~~~~~~ls~~~al~~~T~~pA~~lgl 399 (478)
+.+++.++.-+....|+++++|-
T Consensus 283 -----~l~l~~~~~~~i~~~NA~rl~~~ 305 (312)
T 3ij6_A 283 -----DLTISDKDKQKIFHDNYYSLIKE 305 (312)
T ss_dssp -----TSSSCHHHHHHHHTHHHHHHHCC
T ss_pred -----HcCCCHHHHHHHHHHHHHHHHhC
Confidence 11489999989999999999986
No 114
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=44.02 E-value=22 Score=18.99 Aligned_cols=22 Identities=14% Similarity=0.194 Sum_probs=18.9
Q ss_pred CCHHHHHHHHHHHHHcCCceeE
Q 011766 232 ATDRLLLETRDMAREFKTGIHM 253 (478)
Q Consensus 232 ~~~~~l~~~~~~a~~~~~~v~~ 253 (478)
-++|.++.+.+.|++.++++.+
T Consensus 12 gtpeelkklkeeakkanirvtf 33 (36)
T 2ki0_A 12 GTPEELKKLKEEAKKANIRVTF 33 (36)
T ss_dssp CCHHHHHHHHHHHHHHCCCCCB
T ss_pred CCHHHHHHHHHHHHhccEEEEe
Confidence 4789999999999999888764
No 115
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=43.61 E-value=79 Score=26.98 Aligned_cols=90 Identities=10% Similarity=0.044 Sum_probs=56.7
Q ss_pred CHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeE
Q 011766 233 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKV 312 (478)
Q Consensus 233 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~ 312 (478)
+++....+.+.+.+.|+++.=-........+ .+..+... . +..++.+++.++.++++.+.+.|..+
T Consensus 44 ~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e-----------~I~~l~~~--~-~~~~iGaGTVlt~~~a~~Ai~AGA~f 109 (232)
T 4e38_A 44 NAEDIIPLGKVLAENGLPAAEITFRSDAAVE-----------AIRLLRQA--Q-PEMLIGAGTILNGEQALAAKEAGATF 109 (232)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEETTSTTHHH-----------HHHHHHHH--C-TTCEEEEECCCSHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCCCHHH-----------HHHHHHHh--C-CCCEEeECCcCCHHHHHHHHHcCCCE
Confidence 4456777778888888884422222222111 11211111 1 34678899999999999999999999
Q ss_pred EECccchhhccCCCcHHHHHHCCCcEEEc
Q 011766 313 SHCPASAMRMLGFAPIKEMLHADICVSLG 341 (478)
Q Consensus 313 ~~~p~~~~~~~~~~~~~~~~~~gv~v~~g 341 (478)
.+.|..+. ..++...+.|+++.-|
T Consensus 110 IvsP~~~~-----~vi~~~~~~gi~~ipG 133 (232)
T 4e38_A 110 VVSPGFNP-----NTVRACQEIGIDIVPG 133 (232)
T ss_dssp EECSSCCH-----HHHHHHHHHTCEEECE
T ss_pred EEeCCCCH-----HHHHHHHHcCCCEEcC
Confidence 99997542 2345556667777665
No 116
>2rag_A Dipeptidase; aminohydrolase, structural genomics, NYSGXRC, target 9257A, protein structure initiative; 2.00A {Caulobacter crescentus}
Probab=38.76 E-value=1.4e+02 Score=28.08 Aligned_cols=64 Identities=13% Similarity=0.124 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHcCCceeE-eccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeec---------cCChhHHHHH
Q 011766 236 LLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV---------WVNHTEIGLL 305 (478)
Q Consensus 236 ~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~---------~~~~~~~~~~ 305 (478)
.=+++++...+.|+.|.+ |+++. ... +.++. ....++.+|.. .++++.++.+
T Consensus 210 ~G~~vV~eMnrlGmivDlSH~s~~-t~~--------------dvl~~---s~~PvIaSHSnaral~~hpRNl~De~l~~l 271 (417)
T 2rag_A 210 LGLRWLAEANRLGIVIDVSHASDD-VVD--------------QSVAL---SKAPIIASHSGPKAVYDHPRNLDDARLKKI 271 (417)
T ss_dssp HHHHHHHHHHHHTCEEBCTTBCHH-HHH--------------HHHHH---CSSCCEEEEEEETTTSCCTTEECHHHHHHH
T ss_pred hHHHHHHHHHHcCCEEECCCCCHH-HHH--------------HHHHh---cCCCeEEecCchHhhCCCCCCCCHHHHHHH
Confidence 456677788888998865 55442 211 12221 22345566654 5788999999
Q ss_pred HhcCCeEEECcc
Q 011766 306 SRAGVKVSHCPA 317 (478)
Q Consensus 306 ~~~~~~~~~~p~ 317 (478)
++.|..+-++..
T Consensus 272 a~~GGvigv~f~ 283 (417)
T 2rag_A 272 ADAGGAICINSI 283 (417)
T ss_dssp HHTTCEEEECSS
T ss_pred HHcCCEEEEEEE
Confidence 999987766654
No 117
>3b40_A PVDM, probable dipeptidase; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=31.42 E-value=3.3e+02 Score=25.51 Aligned_cols=62 Identities=10% Similarity=0.134 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHcCCceeE-eccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeec---------cCChhHHHHH
Q 011766 236 LLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV---------WVNHTEIGLL 305 (478)
Q Consensus 236 ~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~---------~~~~~~~~~~ 305 (478)
.=+++++...+.|+.|.+ |+++. ... ..++. ....++.+|.. .++++.++.+
T Consensus 194 ~G~~vV~eMNrlGmiVDlSH~s~~-t~~--------------dvl~~---s~~PVIaSHSnaral~~hpRNl~De~l~~l 255 (417)
T 3b40_A 194 LGKQAVERLNDLGVIIDVSQMSTK-ALE--------------QVAAL---SRAPIVASHSAPRALVDIKRNLSDHEMQLI 255 (417)
T ss_dssp HHHHHHHHHHHHTCEEECTTBCHH-HHH--------------HHHHH---CSSCEEEEEECBTTTSCCTTSBCHHHHHHH
T ss_pred hHHHHHHHHHHcCCEEECCCCCHH-HHH--------------HHHHh---cCCCEEEeCCchhhcCCCCCCCCHHHHHHH
Confidence 456677778888988865 55432 211 11221 22345566654 5789999999
Q ss_pred HhcCCeEEEC
Q 011766 306 SRAGVKVSHC 315 (478)
Q Consensus 306 ~~~~~~~~~~ 315 (478)
++.|..+-++
T Consensus 256 a~~GGVIgv~ 265 (417)
T 3b40_A 256 KDSGGVIQVV 265 (417)
T ss_dssp HHTTCEEEEE
T ss_pred HHcCCEEEEE
Confidence 9998766554
No 118
>2q01_A Uronate isomerase; structural genomics, protein structure initiative NEW YORK SGX research center for structural genomics, nysgx; 2.34A {Caulobacter crescentus}
Probab=29.01 E-value=2.5e+02 Score=27.02 Aligned_cols=156 Identities=11% Similarity=0.023 Sum_probs=72.0
Q ss_pred HHHHHHHHHHcCCceeEeccCChhhhHHHhhhcC------------CCCchHHHHhhhCCCC-CCeeeeeeccCC-hhHH
Q 011766 237 LLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK------------VDHGTVTFLDKIEFLQ-NNLLSAHTVWVN-HTEI 302 (478)
Q Consensus 237 l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~~~~~-~~~~i~h~~~~~-~~~~ 302 (478)
+..+...+.+.|+++.+|.......+.......+ .......+++.....+ +++++-|+.... .+++
T Consensus 292 l~~l~~~~~e~gw~mQlH~Ga~Rn~n~~m~~~~G~d~G~D~~~~~~~a~~L~~lL~~l~~~~~pktILy~Lnp~~y~~el 371 (497)
T 2q01_A 292 LTEMAKMSLDDGLVMQIHPGSHRNHNVGLLNSHGRDKGADIPMRTEYVDALKPLLTRLGNDPRLSIILFTLDETTYSREL 371 (497)
T ss_dssp HHHHHHHHHHHCCEEEECCCEECCCCHHHHHHTCSSSSCCEECCCCCTTTSHHHHHHHTTCTTCCEEECCSCTTHHHHTH
T ss_pred HHHHHHHHHhcCCcEEEeeccCCCCCHHHHHHcCCCCCCCCCCchHHHHHHHHHHHHHhhcCCCCeEEEeCCcchhHHHH
Confidence 4445667888899999998653222222221111 1122334555554433 567765555433 3334
Q ss_pred HHHHhcCCeEEECccchhh--ccCC-CcHHHHHHCC---CcEEEcCCCCCCCC---CcCHHHHHHHHHHHhcccccccCC
Q 011766 303 GLLSRAGVKVSHCPASAMR--MLGF-APIKEMLHAD---ICVSLGTDGAPSNN---RMSIVDEMYLASLINKGREVFANG 373 (478)
Q Consensus 303 ~~~~~~~~~~~~~p~~~~~--~~~~-~~~~~~~~~g---v~v~~gsD~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 373 (478)
..++..=-++-+...+-+. ..++ .-++.+.+.+ --+.+.||+-...+ ...+++.+-...+.. ..
T Consensus 372 atlag~Fpkvq~G~~WWF~d~~~gm~~ql~~l~el~~lskfvGmlTDsRsflSy~~RheyfRRiLc~vLg~----~V--- 444 (497)
T 2q01_A 372 APLAGHYPVLKLGPSWWFHDSPEGMMRFREQVTETAGFYNTVGFNDDTRAFLSIPARHDVARRVDSAFLAR----MV--- 444 (497)
T ss_dssp HHHHTTCTTEEECCCCGGGCSHHHHHHHHHHHHHHHCSTTBCCCCCCCSCGGGHHHHHHHHHHHHHHHHHH----HH---
T ss_pred HHHHccCCccccCCchhhccChHHHHHHHHHHHHhhchhcccccccchhHhhhhhHHHHHHHHHHHHHHHH----HH---
Confidence 4333321122222222111 0111 1223344443 23448899854311 001122221222211 00
Q ss_pred CCCCCCCCHHHHHHHHh----HHHHHHcCCCC
Q 011766 374 TTDPAALPAETVLRMAT----INGAKSVLWDN 401 (478)
Q Consensus 374 ~~~~~~ls~~~al~~~T----~~pA~~lgl~~ 401 (478)
.+..+|.+||.+.+. .||.+++++..
T Consensus 445 --~~~~lse~eA~r~a~~l~~~Na~r~Y~l~~ 474 (497)
T 2q01_A 445 --AEHRMDLVEAEELIVDLTYNLPKKAYKLDQ 474 (497)
T ss_dssp --HTTSSCHHHHHHHHHHHHTHHHHHHTTCCS
T ss_pred --hcCCCCHHHHHHHHHHHHHHhHHHHhCCCC
Confidence 123489999887654 58999999953
No 119
>2npb_A Selenoprotein W; structure, thioredoxin-like fold, oxidoreductase; NMR {Mus musculus}
Probab=25.87 E-value=76 Score=22.75 Aligned_cols=35 Identities=14% Similarity=0.083 Sum_probs=24.4
Q ss_pred CCeeEEEEccEEEEECCeeeccc-HHHHHHHHHHHh
Q 011766 441 ENVVSVMCNGQWVMKNKKILLLM-RGRLFQLQDKLL 475 (478)
Q Consensus 441 ~~v~~v~v~G~~v~~~g~~~~~~-~~~~~~~~~~~~ 475 (478)
+..-.|.+||++|+..-+--+.+ .+++++..++.+
T Consensus 45 ~G~FEV~vng~lV~SKk~~ggFP~~~el~q~I~~~i 80 (96)
T 2npb_A 45 TGFFEVTVAGKLVHSKKRGDGYVDTESKFRKLVTAI 80 (96)
T ss_dssp CSCCEEEETTEEEEETTTTCCSSCSHHHHHHHHHHH
T ss_pred CcEEEEEECCEEEEEEecCCCCCChHHHHHHHHHHH
Confidence 57778899999999866554433 456776666554
No 120
>3tg2_A Vibriobactin-specific isochorismatase; hydrolase; HET: ISC PGE; 1.10A {Vibrio cholerae} PDB: 3tb4_A*
Probab=25.71 E-value=1.4e+02 Score=25.15 Aligned_cols=89 Identities=11% Similarity=0.032 Sum_probs=42.3
Q ss_pred CChhHHHHHHhcCCeEEE-C-ccchhhccCCCcHHHHHHCCCcEEEcCCCCCCCCCcCHHHHHHHHHHHhcccccccCCC
Q 011766 297 VNHTEIGLLSRAGVKVSH-C-PASAMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGT 374 (478)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~-~-p~~~~~~~~~~~~~~~~~~gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (478)
...+..+.+++.|+.-.+ + ...+.+. ...++.+++.|..+.+-+|+..+.+... .+..+..+.....
T Consensus 125 ~~t~L~~~L~~~gi~~lii~G~~t~~CV--~~Ta~da~~~Gy~v~vv~Da~as~~~~~--h~~aL~~~~~~~a------- 193 (223)
T 3tg2_A 125 KKSPLLDWLRETGRDQLIITGVYAHIGI--LSTALDAFMFDIQPFVIGDGVADFSLSD--HEFSLRYISGRTG------- 193 (223)
T ss_dssp TTSSHHHHHHHHTCCEEEEEEECTTTHH--HHHHHHHHHTTCEEEEEEEEEECSSHHH--HHHHHHHHHHHTC-------
T ss_pred ccccHHHHHHhcCcCceEEeecccChHH--HHHHHHHHHCCCEEEEeCcccCCCCHHH--HHHHHHHHHHcCC-------
Confidence 344555677777775322 2 1122221 2345778899999999999865522111 1111111111110
Q ss_pred CCCCCCCHHHHHHHHhHHHHHHcCC
Q 011766 375 TDPAALPAETVLRMATINGAKSVLW 399 (478)
Q Consensus 375 ~~~~~ls~~~al~~~T~~pA~~lgl 399 (478)
.-+|-++++......-++.-|+
T Consensus 194 ---~v~tte~~l~eL~~~~~~~~g~ 215 (223)
T 3tg2_A 194 ---AVKSTQQACLEIAAQHSKLTGL 215 (223)
T ss_dssp ---EEECHHHHHHHHC---------
T ss_pred ---EEecHHHHHHHHHhccccccch
Confidence 1268888888776655554443
No 121
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=23.88 E-value=1.6e+02 Score=24.70 Aligned_cols=73 Identities=5% Similarity=-0.072 Sum_probs=46.9
Q ss_pred CHHHHHHHHHHHHHcCCceeEeccCChhhhHHHhhhcCCCCchHHHHhhhCCCCCCeeeeeeccCChhHHHHHHhcCCeE
Q 011766 233 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKV 312 (478)
Q Consensus 233 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~~~~~~~ 312 (478)
+++....+.+.+.+.|+++.=-........+ .+..+.. .-+..++.-++.++.++.+.+.+.|..+
T Consensus 23 ~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~-----------~I~~l~~---~~p~~~IGAGTVlt~~~a~~ai~AGA~f 88 (217)
T 3lab_A 23 DLVHAIPMAKALVAGGVHLLEVTLRTEAGLA-----------AISAIKK---AVPEAIVGAGTVCTADDFQKAIDAGAQF 88 (217)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEETTSTTHHH-----------HHHHHHH---HCTTSEEEEECCCSHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCccHHH-----------HHHHHHH---HCCCCeEeeccccCHHHHHHHHHcCCCE
Confidence 4556667778888888885432222222111 1222221 1134678889999999999999999999
Q ss_pred EECccch
Q 011766 313 SHCPASA 319 (478)
Q Consensus 313 ~~~p~~~ 319 (478)
.++|..+
T Consensus 89 ivsP~~~ 95 (217)
T 3lab_A 89 IVSPGLT 95 (217)
T ss_dssp EEESSCC
T ss_pred EEeCCCc
Confidence 9998854
No 122
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=22.81 E-value=3.7e+02 Score=23.21 Aligned_cols=115 Identities=13% Similarity=0.139 Sum_probs=68.7
Q ss_pred CHHHHHHHHHHHHHcCCceeEeccCChhhhHH--HhhhcCCCCc---hHHHHhhhCCCCCCeeeeeeccCChhHHHHHH-
Q 011766 233 TDRLLLETRDMAREFKTGIHMHVAEIPYENQV--VMDTRKVDHG---TVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLS- 306 (478)
Q Consensus 233 ~~~~l~~~~~~a~~~~~~v~~H~~~~~~~~~~--~~~~~~~~~~---~~~~l~~~~~~~~~~~i~h~~~~~~~~~~~~~- 306 (478)
..+.++.+.+.+++.|+++.+-..+....... ......++.+ -..++......+..+.+.-+...+.+++..+.
T Consensus 72 ~~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~vd~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~Av~ 151 (262)
T 1zco_A 72 GEKALRWMREAADEYGLVTVTEVMDTRHVELVAKYSDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAE 151 (262)
T ss_dssp THHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHHCSEEEECGGGTTCHHHHHHHTTSSSCEEEECCTTCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhhCCEEEECcccccCHHHHHHHHhcCCcEEEecCCCCCHHHHHHHHH
Confidence 37889999999999999998777665443221 1222222221 22456666777788888888887777765444
Q ss_pred ---hcCC-eEEECccc-----hhhc--cCCCcHHHHHHC-CCcEEEcCCCCCC
Q 011766 307 ---RAGV-KVSHCPAS-----AMRM--LGFAPIKEMLHA-DICVSLGTDGAPS 347 (478)
Q Consensus 307 ---~~~~-~~~~~p~~-----~~~~--~~~~~~~~~~~~-gv~v~~gsD~~~~ 347 (478)
..|. .+..|-+. ++.. ..+..+..|.+. ++++.+-+||..+
T Consensus 152 ~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g 204 (262)
T 1zco_A 152 YIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAG 204 (262)
T ss_dssp HHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTC
T ss_pred HHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCC
Confidence 3332 33333311 2211 233445566655 8888888888643
No 123
>3id7_A Dipeptidase; streptomyces coelicolor A3(2), hydrolase; 1.30A {Streptomyces coelicolor} PDB: 3isi_X* 3itc_A* 3k5x_A* 3s2j_A* 3s2l_A* 3s2m_A* 3s2n_A*
Probab=21.27 E-value=5e+02 Score=24.13 Aligned_cols=67 Identities=15% Similarity=0.032 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHcCCceeE-eccCChhhhHHHhhhcCCCCchHHHHhhhCC------CCCCeeeeeeccCChhHHHHHHhc
Q 011766 236 LLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEF------LQNNLLSAHTVWVNHTEIGLLSRA 308 (478)
Q Consensus 236 ~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~i~h~~~~~~~~~~~~~~~ 308 (478)
.=+++++...+.|+.|.+ |+++... .+ .+..... ...+.+..|.-.++++.++.+++.
T Consensus 172 fG~~vV~eMNrlGmiVDlSH~s~~t~-~d--------------vl~~S~~PvIaSHSnaral~~hpRNl~De~lkala~~ 236 (400)
T 3id7_A 172 FGREVVREMNREGMLVDLSHVAATTM-RD--------------ALDTSTAPVIFSHSSSRAVCDHPRNIPDDVLERLSAN 236 (400)
T ss_dssp HHHHHHHHHHHHTCEEECTTBCHHHH-HH--------------HHHHCSSCCEESSCCBTTTSCCTTSBCHHHHTTHHHH
T ss_pred HHHHHHHHHHHcCCeEEcCCCCHHHH-HH--------------HHHhCCCCEEEecCCccccCCCCCCCCHHHHHHHHHc
Confidence 445667778888888865 5544221 11 1111110 011223345556889999999999
Q ss_pred CCeEEECcc
Q 011766 309 GVKVSHCPA 317 (478)
Q Consensus 309 ~~~~~~~p~ 317 (478)
|.-+-++..
T Consensus 237 GGVIgvnf~ 245 (400)
T 3id7_A 237 GGMAMVTFV 245 (400)
T ss_dssp TCEEEECCC
T ss_pred CCEEEEecc
Confidence 887666543
Done!