Query 011767
Match_columns 478
No_of_seqs 400 out of 2880
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 05:00:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011767.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011767hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 100.0 3.4E-89 7.5E-94 684.1 35.8 336 80-433 2-351 (371)
2 PRK14296 chaperone protein Dna 100.0 3.1E-80 6.7E-85 635.9 34.2 342 81-433 3-362 (372)
3 PRK14288 chaperone protein Dna 100.0 9.9E-79 2.1E-83 624.6 34.4 332 81-432 2-345 (369)
4 PRK14279 chaperone protein Dna 100.0 2.3E-78 5.1E-83 625.9 34.6 352 80-433 7-379 (392)
5 PRK14286 chaperone protein Dna 100.0 9.6E-78 2.1E-82 617.9 34.0 340 81-433 3-358 (372)
6 PRK14284 chaperone protein Dna 100.0 7.8E-77 1.7E-81 615.2 35.4 349 82-433 1-367 (391)
7 PRK14301 chaperone protein Dna 100.0 4.2E-77 9.1E-82 613.3 33.0 357 81-455 3-371 (373)
8 PRK14295 chaperone protein Dna 100.0 1.9E-76 4.1E-81 611.1 36.3 350 80-433 7-373 (389)
9 PRK14277 chaperone protein Dna 100.0 1.9E-76 4.1E-81 611.4 35.7 347 81-433 4-366 (386)
10 PRK14278 chaperone protein Dna 100.0 2.5E-76 5.5E-81 608.5 36.0 332 82-433 3-351 (378)
11 PRK14276 chaperone protein Dna 100.0 2.6E-76 5.6E-81 609.3 35.6 357 81-451 3-374 (380)
12 PRK14285 chaperone protein Dna 100.0 2E-76 4.4E-81 606.6 34.5 341 82-434 3-355 (365)
13 PRK14287 chaperone protein Dna 100.0 3E-76 6.5E-81 606.6 35.5 349 81-452 3-366 (371)
14 PRK14298 chaperone protein Dna 100.0 2.8E-76 6E-81 607.6 34.5 335 81-433 4-352 (377)
15 PRK14294 chaperone protein Dna 100.0 2.6E-76 5.7E-81 606.8 32.9 349 81-448 3-364 (366)
16 PRK14297 chaperone protein Dna 100.0 5.8E-76 1.2E-80 607.1 35.4 340 81-433 3-359 (380)
17 PTZ00037 DnaJ_C chaperone prot 100.0 2.5E-76 5.3E-81 612.7 31.0 326 76-432 22-366 (421)
18 PRK14280 chaperone protein Dna 100.0 1.4E-75 3E-80 603.0 36.3 336 82-433 4-354 (376)
19 PRK10767 chaperone protein Dna 100.0 3.9E-75 8.5E-80 599.8 35.9 336 81-432 3-348 (371)
20 PRK14281 chaperone protein Dna 100.0 3.7E-75 8E-80 603.4 35.0 348 82-432 3-372 (397)
21 PRK14282 chaperone protein Dna 100.0 4.5E-75 9.8E-80 598.2 35.0 343 81-433 3-364 (369)
22 PRK14300 chaperone protein Dna 100.0 8.5E-74 1.8E-78 589.0 35.1 338 82-432 3-352 (372)
23 PRK14291 chaperone protein Dna 100.0 3E-73 6.4E-78 586.9 33.3 348 81-434 2-372 (382)
24 PRK14283 chaperone protein Dna 100.0 5.6E-73 1.2E-77 584.5 34.2 341 81-432 4-356 (378)
25 PRK14290 chaperone protein Dna 100.0 5.8E-73 1.3E-77 581.8 33.3 342 82-433 3-357 (365)
26 TIGR02349 DnaJ_bact chaperone 100.0 8.4E-73 1.8E-77 579.6 33.6 336 83-432 1-353 (354)
27 PRK14289 chaperone protein Dna 100.0 3.4E-72 7.3E-77 580.5 35.4 349 81-433 4-365 (386)
28 PRK14293 chaperone protein Dna 100.0 1.9E-71 4.1E-76 572.3 34.4 332 82-433 3-355 (374)
29 PRK14292 chaperone protein Dna 100.0 9.8E-71 2.1E-75 567.1 34.4 352 82-457 2-371 (371)
30 KOG0712 Molecular chaperone (D 100.0 3.4E-66 7.5E-71 511.6 24.8 321 81-430 3-337 (337)
31 PRK14299 chaperone protein Dna 100.0 2.8E-57 6E-62 452.2 28.9 268 81-432 3-286 (291)
32 PRK10266 curved DNA-binding pr 100.0 6.5E-56 1.4E-60 445.6 29.9 283 82-432 4-293 (306)
33 KOG0713 Molecular chaperone (D 100.0 1.4E-41 3E-46 332.3 12.1 311 80-420 14-328 (336)
34 TIGR03835 termin_org_DnaJ term 100.0 5.6E-40 1.2E-44 348.0 24.2 176 204-434 658-836 (871)
35 KOG0715 Molecular chaperone (D 100.0 3.3E-39 7.2E-44 319.7 13.9 240 82-357 43-288 (288)
36 KOG0714 Molecular chaperone (D 99.9 2.9E-21 6.3E-26 192.0 15.3 264 81-396 2-305 (306)
37 PF01556 CTDII: DnaJ C termina 99.8 5.2E-21 1.1E-25 155.1 7.6 80 346-425 1-81 (81)
38 KOG0716 Molecular chaperone (D 99.8 6.9E-19 1.5E-23 167.8 5.4 72 81-152 30-101 (279)
39 COG2214 CbpA DnaJ-class molecu 99.7 6E-17 1.3E-21 154.0 13.6 69 80-148 4-73 (237)
40 KOG0691 Molecular chaperone (D 99.7 5.7E-18 1.2E-22 167.0 6.3 73 81-153 4-76 (296)
41 KOG0718 Molecular chaperone (D 99.7 9.6E-18 2.1E-22 169.6 5.9 77 80-156 7-86 (546)
42 PF00226 DnaJ: DnaJ domain; I 99.7 2E-17 4.4E-22 127.7 5.7 63 83-145 1-64 (64)
43 KOG0717 Molecular chaperone (D 99.7 1.8E-17 3.8E-22 167.8 4.7 72 79-150 5-77 (508)
44 PTZ00341 Ring-infected erythro 99.7 2.6E-17 5.6E-22 179.8 6.3 74 79-153 570-643 (1136)
45 KOG0719 Molecular chaperone (D 99.6 3.3E-16 7.2E-21 146.0 5.6 70 80-149 12-83 (264)
46 COG0484 DnaJ DnaJ-class molecu 99.6 2.4E-15 5.3E-20 151.9 12.3 115 228-346 158-342 (371)
47 smart00271 DnaJ DnaJ molecular 99.6 1.4E-15 3E-20 115.8 6.3 58 82-139 1-59 (60)
48 cd06257 DnaJ DnaJ domain or J- 99.6 4.8E-15 1E-19 110.7 6.3 55 83-137 1-55 (55)
49 KOG0624 dsRNA-activated protei 99.6 3.4E-15 7.3E-20 146.8 7.0 69 79-147 391-462 (504)
50 PHA03102 Small T antigen; Revi 99.6 4.1E-15 8.8E-20 133.5 5.8 66 82-151 5-72 (153)
51 KOG0721 Molecular chaperone (D 99.5 1.5E-14 3.1E-19 134.1 6.9 72 79-150 96-167 (230)
52 PRK05014 hscB co-chaperone Hsc 99.4 1.5E-13 3.3E-18 126.7 7.0 66 82-147 1-73 (171)
53 PRK14282 chaperone protein Dna 99.4 4E-13 8.8E-18 138.8 9.7 120 228-351 168-360 (369)
54 PRK01356 hscB co-chaperone Hsc 99.4 2.2E-13 4.8E-18 124.9 6.3 67 82-148 2-73 (166)
55 PRK03578 hscB co-chaperone Hsc 99.4 3.8E-13 8.3E-18 124.4 7.2 67 81-147 5-78 (176)
56 PRK00294 hscB co-chaperone Hsc 99.4 4.8E-13 1E-17 123.2 7.5 68 81-148 3-77 (173)
57 PRK14290 chaperone protein Dna 99.4 1.1E-12 2.3E-17 135.5 9.2 120 228-351 164-353 (365)
58 PRK14294 chaperone protein Dna 99.4 1.5E-12 3.2E-17 134.5 9.0 121 228-352 160-348 (366)
59 PRK14298 chaperone protein Dna 99.4 1.4E-12 3E-17 135.0 8.8 120 228-351 157-348 (377)
60 KOG0550 Molecular chaperone (D 99.3 5.6E-13 1.2E-17 134.2 4.8 69 79-147 370-439 (486)
61 PRK10767 chaperone protein Dna 99.3 2.9E-12 6.2E-17 132.7 9.0 121 228-352 158-346 (371)
62 KOG0720 Molecular chaperone (D 99.3 1.1E-12 2.4E-17 133.4 5.2 68 81-149 234-301 (490)
63 PRK14285 chaperone protein Dna 99.3 3.6E-12 7.9E-17 131.5 9.0 120 228-351 162-350 (365)
64 KOG0722 Molecular chaperone (D 99.3 1E-12 2.2E-17 124.1 3.0 67 81-148 32-98 (329)
65 PTZ00100 DnaJ chaperone protei 99.3 3.7E-12 7.9E-17 108.7 5.4 54 79-136 62-115 (116)
66 PRK14301 chaperone protein Dna 99.3 8.9E-12 1.9E-16 128.9 8.7 119 228-350 160-346 (373)
67 PRK14287 chaperone protein Dna 99.3 9.9E-12 2.1E-16 128.5 8.0 120 228-351 154-345 (371)
68 PRK14284 chaperone protein Dna 99.2 1.7E-11 3.6E-16 127.7 8.7 119 229-351 175-363 (391)
69 TIGR02349 DnaJ_bact chaperone 99.2 1.9E-11 4E-16 126.0 8.4 116 229-348 160-347 (354)
70 PRK14300 chaperone protein Dna 99.2 5.4E-11 1.2E-15 123.2 11.6 113 228-344 161-342 (372)
71 PRK14278 chaperone protein Dna 99.2 6E-11 1.3E-15 123.0 10.9 106 228-337 155-333 (378)
72 PRK14288 chaperone protein Dna 99.2 4.4E-11 9.6E-16 123.6 9.7 115 228-346 155-337 (369)
73 PRK14276 chaperone protein Dna 99.2 4.2E-11 9.2E-16 124.3 8.2 107 229-339 163-341 (380)
74 PRK14280 chaperone protein Dna 99.2 6.3E-11 1.4E-15 122.8 9.2 109 228-340 159-339 (376)
75 PRK09430 djlA Dna-J like membr 99.2 2.6E-11 5.7E-16 119.7 6.0 59 79-137 197-262 (267)
76 PRK14281 chaperone protein Dna 99.2 1.1E-10 2.3E-15 121.9 10.6 107 228-338 178-356 (397)
77 PRK14279 chaperone protein Dna 99.2 6.1E-11 1.3E-15 123.5 8.7 107 228-339 189-363 (392)
78 PRK14286 chaperone protein Dna 99.2 6.6E-11 1.4E-15 122.4 8.5 113 229-345 167-348 (372)
79 PRK14293 chaperone protein Dna 99.2 6.5E-11 1.4E-15 122.7 8.4 120 228-351 159-351 (374)
80 PRK14297 chaperone protein Dna 99.1 1.5E-10 3.2E-15 120.3 10.5 105 229-337 165-341 (380)
81 PRK14292 chaperone protein Dna 99.1 9.5E-11 2.1E-15 121.4 9.0 129 217-349 145-343 (371)
82 PF00684 DnaJ_CXXCXGXG: DnaJ c 99.1 2.6E-11 5.7E-16 94.2 3.5 57 232-288 1-66 (66)
83 PRK14289 chaperone protein Dna 99.1 1.8E-10 3.8E-15 120.0 10.2 125 208-336 148-346 (386)
84 PRK14277 chaperone protein Dna 99.1 2.4E-10 5.1E-15 119.0 11.1 106 228-337 171-348 (386)
85 PRK14291 chaperone protein Dna 99.1 2.6E-10 5.7E-15 118.4 11.0 104 228-336 172-344 (382)
86 PHA02624 large T antigen; Prov 99.1 4.9E-11 1.1E-15 127.3 5.3 60 81-144 10-71 (647)
87 PRK14295 chaperone protein Dna 99.1 2.9E-10 6.2E-15 118.3 10.4 106 228-338 182-356 (389)
88 PRK14296 chaperone protein Dna 99.1 3.3E-10 7.2E-15 117.2 10.8 107 228-338 165-345 (372)
89 PRK14283 chaperone protein Dna 99.1 4.9E-10 1.1E-14 116.3 10.9 105 228-336 162-338 (378)
90 PTZ00037 DnaJ_C chaperone prot 99.1 7.3E-10 1.6E-14 116.0 10.8 107 228-336 165-346 (421)
91 PRK01773 hscB co-chaperone Hsc 99.0 3.2E-10 6.8E-15 104.6 6.9 68 82-149 2-76 (173)
92 COG5407 SEC63 Preprotein trans 99.0 3E-10 6.6E-15 115.1 4.8 70 81-150 97-171 (610)
93 TIGR00714 hscB Fe-S protein as 99.0 1.1E-09 2.4E-14 99.7 6.4 57 93-149 2-63 (157)
94 KOG1150 Predicted molecular ch 98.8 4.6E-09 1E-13 96.2 5.6 66 80-145 51-117 (250)
95 PRK14299 chaperone protein Dna 98.7 2.6E-08 5.7E-13 99.9 8.7 70 340-417 125-195 (291)
96 COG5269 ZUO1 Ribosome-associat 98.7 8.4E-09 1.8E-13 98.5 4.0 74 75-148 36-114 (379)
97 PRK10266 curved DNA-binding pr 98.6 1.9E-07 4.1E-12 94.4 8.5 74 342-417 115-202 (306)
98 PF01556 CTDII: DnaJ C termina 98.5 3.5E-07 7.6E-12 74.0 6.0 44 294-337 27-71 (81)
99 PLN03165 chaperone protein dna 98.4 1.6E-07 3.4E-12 79.9 3.7 56 228-292 40-100 (111)
100 KOG1789 Endocytosis protein RM 98.3 9E-07 1.9E-11 97.7 5.7 58 76-136 1275-1336(2235)
101 KOG0712 Molecular chaperone (D 98.3 2.1E-06 4.6E-11 86.3 7.4 103 231-336 145-322 (337)
102 TIGR02642 phage_xxxx uncharact 98.1 2.9E-06 6.3E-11 78.8 4.9 49 264-313 99-149 (186)
103 KOG0568 Molecular chaperone (D 98.1 3.5E-06 7.5E-11 79.1 5.2 57 81-138 46-103 (342)
104 TIGR03835 termin_org_DnaJ term 97.7 0.00011 2.4E-09 80.4 9.3 70 82-152 2-71 (871)
105 COG1107 Archaea-specific RecJ- 97.6 4.2E-05 9.2E-10 80.7 3.4 60 230-290 3-80 (715)
106 KOG0723 Molecular chaperone (D 97.6 0.00013 2.8E-09 60.8 5.4 59 76-138 50-108 (112)
107 KOG3192 Mitochondrial J-type c 97.5 8.8E-05 1.9E-09 65.9 4.1 68 80-147 6-80 (168)
108 PF00684 DnaJ_CXXCXGXG: DnaJ c 97.4 6.5E-05 1.4E-09 58.3 1.9 44 228-274 14-66 (66)
109 PLN03165 chaperone protein dna 96.6 0.0015 3.2E-08 55.8 2.5 41 231-278 54-100 (111)
110 COG1107 Archaea-specific RecJ- 96.5 0.0018 4E-08 68.7 3.5 57 229-288 18-105 (715)
111 KOG2813 Predicted molecular ch 96.4 0.0036 7.7E-08 61.9 4.2 29 266-297 247-275 (406)
112 COG1076 DjlA DnaJ-domain-conta 96.1 0.0045 9.8E-08 57.4 3.2 69 83-151 2-77 (174)
113 COG1076 DjlA DnaJ-domain-conta 95.8 0.0051 1.1E-07 57.1 2.2 54 82-135 113-173 (174)
114 TIGR02642 phage_xxxx uncharact 95.4 0.011 2.5E-07 55.0 3.1 28 248-277 101-128 (186)
115 KOG0431 Auxilin-like protein a 94.9 0.031 6.7E-07 59.5 4.7 44 92-135 398-448 (453)
116 KOG2813 Predicted molecular ch 94.8 0.019 4E-07 57.0 2.5 58 229-290 198-257 (406)
117 PF03656 Pam16: Pam16; InterP 91.9 0.34 7.4E-06 42.5 5.4 59 79-141 55-113 (127)
118 KOG0715 Molecular chaperone (D 90.3 0.43 9.4E-06 47.9 5.1 51 223-277 175-230 (288)
119 KOG2824 Glutaredoxin-related p 82.0 1.3 2.8E-05 43.6 3.2 41 230-276 230-274 (281)
120 KOG2824 Glutaredoxin-related p 79.0 1.9 4.2E-05 42.4 3.4 38 247-291 230-275 (281)
121 cd03031 GRX_GRX_like Glutaredo 78.3 2 4.4E-05 38.7 3.1 24 230-259 100-123 (147)
122 PF11833 DUF3353: Protein of u 76.9 5.4 0.00012 37.7 5.7 40 91-138 1-40 (194)
123 KOG0724 Zuotin and related mol 76.2 2.5 5.5E-05 43.2 3.5 54 94-147 4-61 (335)
124 PF14687 DUF4460: Domain of un 75.6 6 0.00013 34.0 5.1 47 92-138 4-54 (112)
125 TIGR00630 uvra excinuclease AB 73.2 2.1 4.6E-05 49.8 2.2 29 265-293 737-774 (924)
126 PRK14714 DNA polymerase II lar 72.6 2.3 5E-05 50.0 2.3 56 229-294 667-725 (1337)
127 COG1198 PriA Primosomal protei 71.8 3.1 6.8E-05 46.9 3.1 53 226-287 432-484 (730)
128 PRK04023 DNA polymerase II lar 70.2 3.2 6.9E-05 47.8 2.7 68 212-292 609-677 (1121)
129 PF13446 RPT: A repeated domai 66.2 9.6 0.00021 28.7 3.9 45 82-137 5-49 (62)
130 cd03031 GRX_GRX_like Glutaredo 64.6 6.2 0.00013 35.6 3.0 37 247-290 100-145 (147)
131 smart00709 Zpr1 Duplicated dom 64.0 9.8 0.00021 34.8 4.1 20 295-314 81-100 (160)
132 PRK00349 uvrA excinuclease ABC 62.7 4.1 9E-05 47.5 1.8 22 412-433 857-879 (943)
133 TIGR00630 uvra excinuclease AB 62.3 3.5 7.7E-05 48.0 1.2 22 412-433 855-877 (924)
134 TIGR00310 ZPR1_znf ZPR1 zinc f 61.3 15 0.00033 34.6 5.1 20 295-314 80-100 (192)
135 TIGR00595 priA primosomal prot 58.5 7.5 0.00016 42.2 2.8 52 227-287 211-262 (505)
136 PRK14873 primosome assembly pr 58.4 8.4 0.00018 43.3 3.2 50 228-287 382-431 (665)
137 PRK00635 excinuclease ABC subu 57.4 5.9 0.00013 49.1 1.9 28 404-434 1721-1749(1809)
138 PRK05580 primosome assembly pr 55.0 8.7 0.00019 43.3 2.7 50 229-287 381-430 (679)
139 PF14353 CpXC: CpXC protein 53.0 9.5 0.00021 33.2 2.1 13 263-275 37-49 (128)
140 PF03833 PolC_DP2: DNA polymer 52.9 4.5 9.8E-05 45.8 0.0 52 229-292 655-706 (900)
141 PRK00349 uvrA excinuclease ABC 52.4 9.8 0.00021 44.5 2.6 30 266-295 740-778 (943)
142 PF12991 DUF3875: Domain of un 52.2 17 0.00036 26.9 2.8 24 403-426 27-52 (54)
143 PF07709 SRR: Seven Residue Re 51.1 8.8 0.00019 20.2 0.9 13 124-136 2-14 (14)
144 PRK03564 formate dehydrogenase 49.3 17 0.00036 36.9 3.3 21 266-286 214-234 (309)
145 COG0178 UvrA Excinuclease ATPa 47.9 10 0.00022 43.1 1.7 30 264-293 730-768 (935)
146 PRK12336 translation initiatio 46.8 48 0.001 31.4 5.9 14 226-239 95-108 (201)
147 TIGR00340 zpr1_rel ZPR1-relate 45.9 26 0.00057 32.1 3.8 20 295-314 78-98 (163)
148 PF07092 DUF1356: Protein of u 44.3 12 0.00027 36.3 1.5 12 247-258 39-50 (238)
149 PRK05978 hypothetical protein; 43.0 12 0.00027 33.7 1.2 8 278-285 52-59 (148)
150 PF09538 FYDLN_acid: Protein o 41.9 16 0.00036 31.1 1.7 26 228-253 8-33 (108)
151 TIGR00310 ZPR1_znf ZPR1 zinc f 41.0 1.7E+02 0.0036 27.6 8.5 27 362-394 74-101 (192)
152 COG5552 Uncharacterized conser 40.7 96 0.0021 24.5 5.6 29 83-111 4-32 (88)
153 PF04246 RseC_MucC: Positive r 39.8 31 0.00067 30.2 3.3 23 293-315 41-63 (135)
154 PF10041 DUF2277: Uncharacteri 39.8 1.3E+02 0.0029 23.9 6.2 54 83-137 4-61 (78)
155 COG0178 UvrA Excinuclease ATPa 37.1 27 0.00058 39.9 2.9 31 279-309 731-763 (935)
156 PRK00635 excinuclease ABC subu 36.9 12 0.00027 46.5 0.3 29 265-293 1608-1645(1809)
157 PF07295 DUF1451: Protein of u 36.8 33 0.00072 30.9 3.0 32 245-276 111-142 (146)
158 PF03589 Antiterm: Antitermina 34.4 20 0.00043 29.8 1.0 10 266-275 34-43 (95)
159 TIGR02300 FYDLN_acid conserved 33.8 27 0.00058 30.6 1.8 27 228-254 8-34 (129)
160 cd02639 R3H_RRM R3H domain of 33.8 64 0.0014 24.4 3.6 26 409-434 17-42 (60)
161 PF07092 DUF1356: Protein of u 33.1 20 0.00043 34.9 0.9 15 229-243 38-52 (238)
162 TIGR01562 FdhE formate dehydro 32.2 43 0.00093 33.9 3.2 16 99-114 100-115 (305)
163 PF08792 A2L_zn_ribbon: A2L zi 31.7 29 0.00062 23.0 1.3 11 248-258 5-15 (33)
164 PF12434 Malate_DH: Malate deh 29.9 56 0.0012 20.6 2.2 16 96-111 10-25 (28)
165 smart00276 GLECT Galectin. Gal 29.8 66 0.0014 27.8 3.7 42 375-416 3-49 (128)
166 PRK00564 hypA hydrogenase nick 29.1 51 0.0011 28.4 2.8 12 227-238 69-80 (117)
167 PF09862 DUF2089: Protein of u 29.0 37 0.00081 29.2 1.9 20 267-286 1-20 (113)
168 PF00690 Cation_ATPase_N: Cati 28.9 1.9E+02 0.0041 21.8 5.8 42 413-457 16-57 (69)
169 PRK14559 putative protein seri 27.4 41 0.0009 37.7 2.4 49 230-287 2-50 (645)
170 PRK00398 rpoP DNA-directed RNA 25.7 54 0.0012 23.0 2.0 7 265-271 22-28 (46)
171 PRK12380 hydrogenase nickel in 24.9 57 0.0012 27.9 2.3 45 216-261 56-101 (113)
172 PRK11032 hypothetical protein; 24.6 68 0.0015 29.3 2.8 16 98-113 3-18 (160)
173 KOG4782 Predicted membrane pro 24.4 1.5E+02 0.0032 24.5 4.4 42 417-471 29-75 (108)
174 COG3058 FdhE Uncharacterized p 23.3 15 0.00033 36.3 -1.7 57 227-287 183-261 (308)
175 KOG0315 G-protein beta subunit 23.0 76 0.0017 31.3 3.0 31 349-379 18-50 (311)
176 COG3635 Predicted phosphoglyce 22.6 2.8E+02 0.0062 29.0 7.1 94 298-396 49-163 (408)
177 cd02641 R3H_Smubp-2_like R3H d 22.5 1.1E+02 0.0025 22.9 3.3 23 411-433 19-41 (60)
178 PF14599 zinc_ribbon_6: Zinc-r 22.5 58 0.0012 24.8 1.6 25 248-272 32-56 (61)
179 cd06007 R3H_DEXH_helicase R3H 22.5 1.2E+02 0.0027 22.8 3.4 25 409-433 16-40 (59)
180 KOG3442 Uncharacterized conser 21.7 1.4E+02 0.003 26.1 4.0 55 82-140 59-113 (132)
181 PF09297 zf-NADH-PPase: NADH p 21.6 64 0.0014 20.8 1.5 22 249-270 6-27 (32)
182 PF13719 zinc_ribbon_5: zinc-r 21.3 47 0.001 22.4 0.9 6 231-236 4-9 (37)
183 COG5435 Uncharacterized conser 20.9 2.2E+02 0.0048 25.6 5.2 33 402-434 108-140 (147)
184 PF13901 DUF4206: Domain of un 20.7 38 0.00082 32.1 0.4 46 231-285 144-196 (202)
185 TIGR00100 hypA hydrogenase nic 20.4 69 0.0015 27.5 1.9 9 228-236 69-77 (115)
186 PHA02576 3 tail completion and 20.0 1.6E+02 0.0034 27.4 4.3 53 361-413 12-74 (177)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.4e-89 Score=684.10 Aligned_cols=336 Identities=45% Similarity=0.816 Sum_probs=302.8
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCC
Q 011767 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA 159 (478)
Q Consensus 80 ~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~ 159 (478)
+.+|||+||||+++||.+|||||||+||++||||+|+++++|+++|++|+|||||||||+||++||+||..+..+.+
T Consensus 2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg--- 78 (371)
T COG0484 2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGG--- 78 (371)
T ss_pred CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCC---
Confidence 46799999999999999999999999999999999998899999999999999999999999999999887654211
Q ss_pred CCCCCccccCCCCCccccccccccccccchhcccccCc--------cccCCCceEEEEeeeehhhccCccccccccceec
Q 011767 160 GDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE--------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (478)
Q Consensus 160 ~~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~F~~~--------~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~ 231 (478)
++++ +|. .|+.+|.|||+++|++. .+.++.|+.+.|+|||+||+.|+++++.+++.+.
T Consensus 79 --~gg~-------g~~-----~fgg~~~DIF~~~FgGg~~~~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~ 144 (371)
T COG0484 79 --FGGF-------GFG-----GFGGDFGDIFEDFFGGGGGGRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVT 144 (371)
T ss_pred --cCCC-------CcC-----CCCCCHHHHHHHhhcCCCcccCCCCCcccCCceEEEEEeEhhhhccCceeeEecceeeE
Confidence 1111 111 11114566777777321 2458999999999999999999999999999999
Q ss_pred cCCCCCCCccCCCcccccCCcccccEEEcC------CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCcCC
Q 011767 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (478)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~------~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G~~ 305 (478)
|+.|+|+|++.+....+|++|+|+|.+... .++++|+.|+|+|++|+++|.+|+|.|++.+.++++|+||+|+.
T Consensus 145 C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~i~~pC~~C~G~G~v~~~~~i~V~IPaGv~ 224 (371)
T COG0484 145 CSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGVD 224 (371)
T ss_pred CCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeECCCCCCCCCCCCeEeeeeEEEEECCCCCc
Confidence 999999999999999999999999986543 24889999999999999999999999999999999999999999
Q ss_pred CCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCEEEEEeCCCCCCCc
Q 011767 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQ 385 (478)
Q Consensus 306 ~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~ 385 (478)
+|++|++.|+|+++.+|+++|||||.|.|++|+.|.|+|+|||++++|++.+|++|++++||||||.++|+||+|+++|+
T Consensus 225 ~g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g~~~l~ip~Gtq~G~ 304 (371)
T COG0484 225 DGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGRVKLKIPAGTQTGE 304 (371)
T ss_pred cCCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCCCEEEecCCCCccCc
Confidence 99999999999999889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHHh
Q 011767 386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (478)
Q Consensus 386 ~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~~ 433 (478)
+++|+|+|||.... ..+|||||+++|++|++||++|+++|++|++..
T Consensus 305 ~~rl~gkG~p~~~~-~~~GDl~v~v~v~~P~~ls~~q~~lL~~~~~~~ 351 (371)
T COG0484 305 VFRLRGKGMPKLRS-GGRGDLYVRVKVETPKNLSDEQKELLEEFAKSL 351 (371)
T ss_pred EEEEcCCCccccCC-CCcCCEEEEEEEEcCCCCCHHHHHHHHHHHHhh
Confidence 99999999997533 235999999999999999999999999999865
No 2
>PRK14296 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.1e-80 Score=635.86 Aligned_cols=342 Identities=32% Similarity=0.641 Sum_probs=297.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCC
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~ 160 (478)
.+|||+||||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.||+.||++|+.+..... +
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~-~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~---~ 78 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNK-SPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSS---G 78 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCC---C
Confidence 469999999999999999999999999999999997 478999999999999999999999999999876543210 0
Q ss_pred CCCCccccCCCCCccccccc----cccccccchhcccccCc-----cccCCCceEEEEeeeehhhccCccccccccceec
Q 011767 161 DAEGFRYAGDAEGFRYAYQT----HFSDSFHKIFSEIFEDE-----TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (478)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~----~f~~~f~~~F~~~F~~~-----~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~ 231 (478)
..++| .+|+.+|.. .| .+|.++|+++|++. .+.+++|+++.+.|||+|+|.|+++++.+.+.+.
T Consensus 79 ~~~~~------~~~~~~~~~~~~~g~-~~f~d~f~~~fggg~~~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~ 151 (372)
T PRK14296 79 FSSNF------GDFEDLFSNMGSSGF-SSFTNIFSDFFGSNKSDYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTN 151 (372)
T ss_pred cCcCC------Ccccccccccccccc-ccchhhhhhhcCCCccCCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEeeeec
Confidence 00011 012111111 11 23567777777631 2346889999999999999999999999999999
Q ss_pred cCCCCCCCccCCCcccccCCcccccEEEcC--------CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCc
Q 011767 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG 303 (478)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G 303 (478)
|++|+|+|........+|+.|+|+|.+... +.+.+|+.|+|+|++++.+|..|.|.|++.+.++++|.||||
T Consensus 152 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G 231 (372)
T PRK14296 152 CSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKG 231 (372)
T ss_pred cCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeecccccCCCCceEEEEEEEEEEEECCC
Confidence 999999999988888999999999987532 235799999999999999999999999999999999999999
Q ss_pred CCCCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccC-CCceeecccCCHHHHhcCCeEEEecCCCEEEEEeCCCCC
Q 011767 304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRD-GADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQ 382 (478)
Q Consensus 304 ~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~-G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~ 382 (478)
+++|++|+|+|+|++...+..+|||+|+|+++||+.|+|+ |+|||++++|||.|||+|+++.|+||||+++|+||++++
T Consensus 232 ~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~t~ 311 (372)
T PRK14296 232 IRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTLDGDIKYKLPKSIN 311 (372)
T ss_pred CCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCCCCCEEEEECCccC
Confidence 9999999999999987667789999999999999999995 899999999999999999999999999999999999999
Q ss_pred CCcEEEEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHHh
Q 011767 383 PGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (478)
Q Consensus 383 ~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~~ 433 (478)
+|++++|+|+|||.......+|||||+|+|+||+.||++|+++|++|++..
T Consensus 312 ~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~l~~~~ 362 (372)
T PRK14296 312 SNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKELIEQIYEQT 362 (372)
T ss_pred CCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 999999999999965333457999999999999999999999999999753
No 3
>PRK14288 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=9.9e-79 Score=624.55 Aligned_cols=332 Identities=32% Similarity=0.636 Sum_probs=290.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCC
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~ 160 (478)
..|||+||||+++||.+|||+|||+||++||||+|+.+++|+++|++|++||+||+||.+|++||++|..+.... ++
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~---~~ 78 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQA---GA 78 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccC---CC
Confidence 369999999999999999999999999999999998778899999999999999999999999999987653211 00
Q ss_pred CCCCccccCCCCCccccccccccccccchhcccccC-------ccccCCCceEEEEeeeehhhccCccccccccceeccC
Q 011767 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (478)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~F~~-------~~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~C~ 233 (478)
+ ++.|.++| +.|.++|+++|+. ....+++|+++.|.|||+|+|.|+++++.+++.+.|+
T Consensus 79 ~---------~~~~~~~f-----~~~~~~F~~~fg~g~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~ 144 (369)
T PRK14288 79 S---------QSDFSDFF-----EDLGSFFEDAFGFGARGSKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCE 144 (369)
T ss_pred C---------ccccccch-----hhHHHHHHhhcCCCCcccCcCCCCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCC
Confidence 0 01122221 1233444444431 1135689999999999999999999999999999999
Q ss_pred CCCCCCccCCCcccccCCcccccEEEcC----CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCcCCCCCE
Q 011767 234 SCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309 (478)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G~~~G~~ 309 (478)
.|+|+|.... ...+|+.|+|+|.+... .+..+|+.|.|+|++++.+|..|.|.|++.+.++++|.||||+++|++
T Consensus 145 ~C~G~G~~~~-~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~ 223 (369)
T PRK14288 145 SCDGTGAKDK-ALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNR 223 (369)
T ss_pred CCCCcccCCC-CCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceEccccCccCCCcceEEEEEEEEEecCCCCCCCCE
Confidence 9999999875 57899999999987543 246799999999999999999999999999999999999999999999
Q ss_pred EEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCE-EEEEeCCCCCCCcEEE
Q 011767 310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLV 388 (478)
Q Consensus 310 i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~~ 388 (478)
|+|+|+|++.+ ++.+|||+|+|+|++|+.|+|+|+|||++++|||.|||+|+++.|+||||+ ++|+||+++++|++++
T Consensus 224 i~l~g~G~~~~-~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~ 302 (369)
T PRK14288 224 MVLKNKGNEYE-KGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFA 302 (369)
T ss_pred EEEccCccCCC-CCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEE
Confidence 99999999865 578999999999999999999999999999999999999999999999996 8999999999999999
Q ss_pred EcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHH
Q 011767 389 LRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEE 432 (478)
Q Consensus 389 i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~ 432 (478)
|+|+|||..+. ..+|||||+|+|++|+.|+++|+++|++|++.
T Consensus 303 i~g~G~p~~~~-~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~~ 345 (369)
T PRK14288 303 FRNEGVKHPES-SYRGSLIVELQVIYPKSLNKEQQELLEKLHAS 345 (369)
T ss_pred EcCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 99999997643 24799999999999999999999999999975
No 4
>PRK14279 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.3e-78 Score=625.90 Aligned_cols=352 Identities=36% Similarity=0.680 Sum_probs=301.3
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCc-cc-
Q 011767 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENE-KY- 157 (478)
Q Consensus 80 ~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~-~~- 157 (478)
+.+|||+||||+++|+.+|||+|||+||++||||+++++++|+++|++|++||+||+||.||++||++|..+.... ..
T Consensus 7 ~~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~~ 86 (392)
T PRK14279 7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGGR 86 (392)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhccccccccc
Confidence 3479999999999999999999999999999999998778899999999999999999999999999986422110 00
Q ss_pred ---CCCCCCCccccC--CCCCccccccccc---cccccchhcccccCc-------cccCCCceEEEEeeeehhhccCccc
Q 011767 158 ---SAGDAEGFRYAG--DAEGFRYAYQTHF---SDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTK 222 (478)
Q Consensus 158 ---~~~~~~~~~~~~--~~~~f~~~~~~~f---~~~f~~~F~~~F~~~-------~~~~g~di~~~l~ltlee~~~G~~k 222 (478)
+.+++++|.+.. .+..|.++|+..+ ..+|.++|+.+|++. .+.+++|+++.|.|||+|+|.|+++
T Consensus 87 ~~~~~~~~~g~~~~~~~~~~d~~~~f~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~~~~g~di~~~l~ltLee~~~G~~~ 166 (392)
T PRK14279 87 RFDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTM 166 (392)
T ss_pred cccCCCCCCCccccccccCcChhhhhcccccccccchhhhhhhhhcCCCcccccCCCCCCCCeEEEEEEEHHHHhCCeEE
Confidence 001111221100 0112333332111 123567777777531 2346889999999999999999999
Q ss_pred cccccceeccCCCCCCCccCCCcccccCCcccccEEEcC----CccccCCCcCCceEEeeeccccccCCceEeceEEEEE
Q 011767 223 HVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKV 298 (478)
Q Consensus 223 ~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V 298 (478)
++.+.+.+.|++|+|+|........+|+.|+|+|.+... .++.+|+.|+|+|++++.+|..|.|.|++.+.++++|
T Consensus 167 ~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~g~v~~~~~~~V 246 (392)
T PRK14279 167 PLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIEDPCEECKGTGVTTRTRTINV 246 (392)
T ss_pred EEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEecceEEEEecCCCCceeEEeCCcCCCCCCCeEEEEeeeeEE
Confidence 999999999999999999988888999999999987543 2578999999999999999999999999999999999
Q ss_pred EecCcCCCCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCEEEEEeC
Q 011767 299 TIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIP 378 (478)
Q Consensus 299 ~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip 378 (478)
.||||+++|++|+|+|+|++.+.+..+|||+|+|+|+||+.|+|+|+||+++++|+|.+|++|+++.|+|+||+++|+||
T Consensus 247 ~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~i~v~Ip 326 (392)
T PRK14279 247 RIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPVGVKVP 326 (392)
T ss_pred EeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCceEEEEEC
Confidence 99999999999999999999877778899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcEEEEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHHh
Q 011767 379 KGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (478)
Q Consensus 379 ~g~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~~ 433 (478)
+++++|++++|+|+|||..+ ..+|||||+|+|.||+.||++|+++|++|+..+
T Consensus 327 ~g~~~g~~iri~g~G~p~~~--~~~GDL~I~~~v~~P~~Ls~~q~~~l~~~~~~~ 379 (392)
T PRK14279 327 AGTADGRILRVRGRGVPKRS--GGAGDLLVTVKVAVPPNLDGAAAEALEAYAEAE 379 (392)
T ss_pred CCCCCCCEEEECCCCCCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 99999999999999999753 247999999999999999999999999999753
No 5
>PRK14286 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=9.6e-78 Score=617.86 Aligned_cols=340 Identities=34% Similarity=0.700 Sum_probs=296.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCC
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~ 160 (478)
..|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||++|.++..... ++.
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~-~~~ 81 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGA-GGF 81 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhcccc-CCC
Confidence 3699999999999999999999999999999999987788999999999999999999999999999876543210 000
Q ss_pred CCCCccccCCCCCccccccccccccccchhcccccCc-----------cccCCCceEEEEeeeehhhccCccccccccce
Q 011767 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-----------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAF 229 (478)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~F~~~-----------~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~ 229 (478)
+.++| .+|..+| ++|.++|+++|++. .+.+++|+++.|.|||+|+|.|+++++.+++.
T Consensus 82 ~~~~~------~~~~~~~-----~~~~d~f~~ffgg~~~~~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~ 150 (372)
T PRK14286 82 GQGAY------TDFSDIF-----GDFGDIFGDFFGGGRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRL 150 (372)
T ss_pred CCCCc------ccccccc-----cchhhHHHHhhCCCccCCCcccccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeecc
Confidence 00000 0111111 23456666666521 13468899999999999999999999999999
Q ss_pred eccCCCCCCCccCCCcccccCCcccccEEEcC----CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCcCC
Q 011767 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (478)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G~~ 305 (478)
+.|++|+|+|........+|+.|+|+|.+... ++..+|+.|+|+|++++.+|..|+|.|++.+.++++|.||||++
T Consensus 151 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~ 230 (372)
T PRK14286 151 ESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVE 230 (372)
T ss_pred ccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEecccCCCCCCCcEEecceEEEEEECCCCC
Confidence 99999999999988888999999999987542 25779999999999999999999999999999999999999999
Q ss_pred CCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCE-EEEEeCCCCCCC
Q 011767 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPG 384 (478)
Q Consensus 306 ~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g 384 (478)
+|++|+|+|+|++...+..+|||||+|+|+||+.|+|+|+||+++++|+|.+|++|+++.|+||||+ ++|+||+++++|
T Consensus 231 ~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i~v~ip~g~~~g 310 (372)
T PRK14286 231 TGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKAKMKIPEGTESG 310 (372)
T ss_pred CCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEEEEEeCCccCCC
Confidence 9999999999999876677899999999999999999999999999999999999999999999996 899999999999
Q ss_pred cEEEEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHHh
Q 011767 385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (478)
Q Consensus 385 ~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~~ 433 (478)
++++|+|+|||..+. ..+|||||+|+|.||+.||++|+++|++|++.+
T Consensus 311 ~~~ri~G~G~P~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~~~ 358 (372)
T PRK14286 311 QVFRLKGHGMPYLGA-YGKGDQHVIVKIEIPKKITRRQRELIEEFARES 358 (372)
T ss_pred cEEEECCCCCCCCCC-CCCCcEEEEEEEECCCCCCHHHHHHHHHHHHhc
Confidence 999999999997643 247999999999999999999999999999865
No 6
>PRK14284 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.8e-77 Score=615.25 Aligned_cols=349 Identities=36% Similarity=0.679 Sum_probs=296.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCCC
Q 011767 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (478)
Q Consensus 82 ~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~~ 161 (478)
.|||+||||+++||.+|||+|||+||++||||++++++.|+++|++|++||+||+||.+|+.||++|.++......+. .
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~~-~ 79 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGF-G 79 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCCc-C
Confidence 389999999999999999999999999999999988788999999999999999999999999999876532110000 0
Q ss_pred CCCccc-cCCCCCccccccccccccccchhcccccC-----------ccccCCCceEEEEeeeehhhccCccccccccce
Q 011767 162 AEGFRY-AGDAEGFRYAYQTHFSDSFHKIFSEIFED-----------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAF 229 (478)
Q Consensus 162 ~~~~~~-~~~~~~f~~~~~~~f~~~f~~~F~~~F~~-----------~~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~ 229 (478)
..+|.. ......|..+|+..| +.+.++|+++|++ ..+.+++|+.+.|.|||+|+|.|+++++.+++.
T Consensus 80 ~~g~~~~~~~~~~~~~~f~~~~-~~~~d~f~~~fgg~g~~~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~ 158 (391)
T PRK14284 80 GAGMGNMEDALRTFMGAFGGEF-GGGGSFFEGLFGGLGEAFGMRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGY 158 (391)
T ss_pred CCCcCcccchhhhccccccccc-cccccchhhhccCccccccccccCCCcCCCCCeEEEEEEEHHHHhCCeeEEEEEeee
Confidence 011110 000011222221111 1124556666542 112468899999999999999999999999999
Q ss_pred eccCCCCCCCccCCCcccccCCcccccEEEcC----CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCcCC
Q 011767 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (478)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G~~ 305 (478)
+.|+.|+|+|........+|+.|+|+|.+... .+..+|+.|+|+|++++++|..|.|.|++.+.++++|.||||+.
T Consensus 159 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~ 238 (391)
T PRK14284 159 KSCDACSGSGANSSQGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVHIPAGVD 238 (391)
T ss_pred ccCCCCcccccCCCCCCeecCccCCeeEEEEEeceEEEEEECCCCCCCCcccCCcCCCCCCcceecceEEEEEEECCCCC
Confidence 99999999999988888999999999987532 24779999999999999999999999999999999999999999
Q ss_pred CCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCC--CEEEEEeCCCCCC
Q 011767 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLS--GKVQVKIPKGVQP 383 (478)
Q Consensus 306 ~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tld--G~~~v~ip~g~~~ 383 (478)
+|++|+|+|+|++++.++.+|||||+|+++||+.|+|+|+||+++++|||.+|++|++++|+|+| +.++|+||+++++
T Consensus 239 ~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~i~v~Ip~g~~~ 318 (391)
T PRK14284 239 SGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTCRLTIPEGIQS 318 (391)
T ss_pred CCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcEEEEEECCccCC
Confidence 99999999999998878889999999999999999999999999999999999999999999999 5789999999999
Q ss_pred CcEEEEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHHh
Q 011767 384 GQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (478)
Q Consensus 384 g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~~ 433 (478)
|++++|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|++.+
T Consensus 319 g~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~~~~ 367 (391)
T PRK14284 319 GTILKVRGQGFPNVHG-KGRGDLLVRISVETPQNLSEEQKELLRQFAATE 367 (391)
T ss_pred CeEEEECCCCCCCCCC-CCCCcEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 9999999999997642 247999999999999999999999999999754
No 7
>PRK14301 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.2e-77 Score=613.30 Aligned_cols=357 Identities=41% Similarity=0.736 Sum_probs=307.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCC
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~ 160 (478)
..|||++|||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||++|..+..+. +
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~----~ 78 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGN----G 78 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccC----C
Confidence 469999999999999999999999999999999998778899999999999999999999999999987654321 1
Q ss_pred CCCCccccCCCCCccccccccccccccchhcccccC--------ccccCCCceEEEEeeeehhhccCccccccccceecc
Q 011767 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC 232 (478)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~F~~--------~~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~C 232 (478)
++++|. +..++| +.|.++|+++|+. ..+.+++|+.+.|.|||+|+|.|+++++.+++.+.|
T Consensus 79 ~~~g~~--~~~~~~---------~~f~d~f~~~fg~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C 147 (373)
T PRK14301 79 GFGGFS--SAEDIF---------SHFSDIFGDLFGFSGGGSRRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTC 147 (373)
T ss_pred CCCCcc--cccccc---------cchHHHHHHHhhccCcccccCCCCCCCCCEEEEEeccHHHHhCCceEEEEeeecccC
Confidence 111111 011111 1234455554431 123468999999999999999999999999999999
Q ss_pred CCCCCCCccCCCcccccCCcccccEEEcC----CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCcCCCCC
Q 011767 233 DSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD 308 (478)
Q Consensus 233 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G~~~G~ 308 (478)
+.|+|+|........+|+.|+|+|.+... ....+|+.|+|+|++++..|..|+|.|++.+.++++|.||||+++|+
T Consensus 148 ~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~ 227 (373)
T PRK14301 148 DDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGS 227 (373)
T ss_pred CCCCCcccCCCCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeeecCCCCCCCCCCceeccceEEEEEeCCCCcCCC
Confidence 99999999988888999999999987543 24789999999999999999999999999999999999999999999
Q ss_pred EEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCEEEEEeCCCCCCCcEEE
Q 011767 309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLV 388 (478)
Q Consensus 309 ~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~~ 388 (478)
+|+|+|+|++...+..+|||||+|+|++|+.|+|+|+||+++++|+|.+|++|+++.|+||||+++|+||+++++|++++
T Consensus 228 ~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~i~v~ip~g~~~g~~~r 307 (373)
T PRK14301 228 RLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPVTLDIPKGTQSGEVFR 307 (373)
T ss_pred EEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCccEEEEECCCcCCCcEEE
Confidence 99999999987767789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHHhccCCCCCccchhHHHHHHHHhc
Q 011767 389 LRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEEINNENNTSAEENWWQRIVERVR 455 (478)
Q Consensus 389 i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (478)
|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|+..+.. ....+-..||..+.+.|-
T Consensus 308 i~g~G~p~~~~-~~~GDL~I~~~V~~P~~l~~~q~~~l~~l~~~~~~--~~~~~~~~~~~~~~~~~~ 371 (373)
T PRK14301 308 LRGKGLPYLGS-SQKGDLLVEVSVVTPTKLTKRQEELLREFEALEEE--KPLEKVKKFFKKIGKAMG 371 (373)
T ss_pred EcCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhccc--CHHHHHHHHHHHHHHhhc
Confidence 99999997643 24799999999999999999999999999976421 222344789998888763
No 8
>PRK14295 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.9e-76 Score=611.11 Aligned_cols=350 Identities=36% Similarity=0.701 Sum_probs=298.3
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhc----cccCCCCCc
Q 011767 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDR----RRSRGSENE 155 (478)
Q Consensus 80 ~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~----~~~~g~~~~ 155 (478)
+..|||+||||+++||.+|||+|||+||++||||+++.+++|+++|++|++||+||+||.+|++||+ +|.++....
T Consensus 7 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~~ 86 (389)
T PRK14295 7 IEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRPG 86 (389)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcccccccC
Confidence 3469999999999999999999999999999999998777899999999999999999999999999 776554311
Q ss_pred ccCCCCCCCccccCCCCCcccccc----ccccccccchhcccccC----ccccCCCceEEEEeeeehhhccCcccccccc
Q 011767 156 KYSAGDAEGFRYAGDAEGFRYAYQ----THFSDSFHKIFSEIFED----ETSHFAPDIQVELVLSFAEAAKGCTKHVSFD 227 (478)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~~~~----~~f~~~f~~~F~~~F~~----~~~~~g~di~~~l~ltlee~~~G~~k~v~~~ 227 (478)
. +.++.++|.+ +..+.|+.+++ ..|++.|.++|+.+|++ ....+++|+++.|.|||+|+|.|+++++.++
T Consensus 87 ~-~~~~~~~~~~-~~~~~f~~~~~~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~g~di~~~l~lsLee~~~G~~k~i~~~ 164 (389)
T PRK14295 87 P-GGGGGGGFNF-DLGDLFGGGAQGGGGAGGGGGLGDVFGGLFNRGGRRTQPRRGADVESEVTLSFTEAIDGATVPLRLT 164 (389)
T ss_pred C-CCCCCCCCCc-ccccccccccccccccccccchhhhhcccccCCCCCCCCCCCCCEEEEEEEEHHHHhCCceEEEEee
Confidence 0 0000011110 00111111100 01222355667766653 1235789999999999999999999999999
Q ss_pred ceeccCCCCCCCccCCCcccccCCcccccEEEcC----CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCc
Q 011767 228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG 303 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G 303 (478)
+.+.|++|+|+|...+....+|+.|+|+|.+... .++.+|+.|+|+|++++.+|..|.|.|++.+.++++|.||||
T Consensus 165 r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G 244 (389)
T PRK14295 165 SQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRIPAG 244 (389)
T ss_pred ccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEecceEEEEecCCCcceeEEeccCCCCCCCCceEeeeeEEEEEeCCC
Confidence 9999999999999988888999999999987543 247799999999999999999999999999999999999999
Q ss_pred CCCCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCC-EEEEEeCCCCC
Q 011767 304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQ 382 (478)
Q Consensus 304 ~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG-~~~v~ip~g~~ 382 (478)
+++|++|+|+|+|++...+..+|||+|+|+++||+.|+|+|+||+++++|||.+|++|++++|+|||| .++|+||++++
T Consensus 245 ~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~~~v~ip~g~~ 324 (389)
T PRK14295 245 VSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPPVTVKLPPGTP 324 (389)
T ss_pred CCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCEEEEEECCccC
Confidence 99999999999999877777899999999999999999999999999999999999999999999999 68999999999
Q ss_pred CCcEEEEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHHh
Q 011767 383 PGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (478)
Q Consensus 383 ~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~~ 433 (478)
+|++++|+|+|||..+ ..+|||||+|+|.||+.||++|+++|++|++..
T Consensus 325 ~g~~iri~G~G~p~~~--~~~GDL~i~~~v~~P~~Ls~~qk~~l~~l~~~~ 373 (389)
T PRK14295 325 NGRVLRVRGKGAVRKD--GTRGDLLVTVEVAVPKDLSGKAREALEAFREAT 373 (389)
T ss_pred CCcEEEECCCCcCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 9999999999999653 247999999999999999999999999999754
No 9
>PRK14277 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.9e-76 Score=611.43 Aligned_cols=347 Identities=40% Similarity=0.763 Sum_probs=294.1
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCC
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~ 160 (478)
..|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||++|..+......+.+
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~ 83 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQG 83 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhccccccccccccC
Confidence 36999999999999999999999999999999999877889999999999999999999999999998765432111110
Q ss_pred CC--CCccccCCCCCccccccccccccccchhcccccCc------cccCCCceEEEEeeeehhhccCccccccccceecc
Q 011767 161 DA--EGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC 232 (478)
Q Consensus 161 ~~--~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~F~~~------~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~C 232 (478)
+. .++. ..+|...+ ..|.+.|.++|+.+|++. .+.+++|+++.|.|||+|+|.|+++++.+++.+.|
T Consensus 84 ~~~~~g~~----~~~~~~~~-~~~~d~f~~~F~~~fgg~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C 158 (386)
T PRK14277 84 GFGQGGFG----GGGFDFDF-GGFGDIFEDIFGDFFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKC 158 (386)
T ss_pred CcCCCCcc----ccCccccc-cchhHHHHHhhcccccCCCcCCCCCCCCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccC
Confidence 00 1110 00010000 011122333344333321 13468999999999999999999999999999999
Q ss_pred CCCCCCCccCCCcccccCCcccccEEEcC--------CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCcC
Q 011767 233 DSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV 304 (478)
Q Consensus 233 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G~ 304 (478)
+.|+|+|........+|+.|+|+|.+... ....+|+.|+|+|++++.+|..|+|.|++.+.++++|.||||+
T Consensus 159 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~ 238 (386)
T PRK14277 159 DVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGI 238 (386)
T ss_pred CCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeeccCCCCCCCCCcEEeeeeEEEEecCCCc
Confidence 99999999988888999999999987532 1256999999999999999999999999999999999999999
Q ss_pred CCCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCEEEEEeCCCCCCC
Q 011767 305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPG 384 (478)
Q Consensus 305 ~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g 384 (478)
++|++|+|+|+|++...+..+|||+|+|+|+||+.|+|+|+||+++++|++.+|++|+++.|+||||+++|+||+++++|
T Consensus 239 ~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g 318 (386)
T PRK14277 239 DDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGKVKFTIPEGTQTG 318 (386)
T ss_pred cCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCCEEEEECCCCCCC
Confidence 99999999999998766677899999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHHh
Q 011767 385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (478)
Q Consensus 385 ~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~~ 433 (478)
++++|+|+|||..+.. .+|||||+|+|.||+.||++|+++|++|++..
T Consensus 319 ~~~ri~g~G~p~~~~~-~~GDL~v~~~V~~P~~Ls~~qk~~l~~l~~~~ 366 (386)
T PRK14277 319 TKFRLRGKGIPHLRGR-GRGDQIVKVYIEVPKKLTEKQKELLREFEKLS 366 (386)
T ss_pred CEEEECCCCCCCCCCC-CCCCEEEEEEEEeCCCCCHHHHHHHHHHHhhc
Confidence 9999999999976432 47999999999999999999999999999753
No 10
>PRK14278 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.5e-76 Score=608.51 Aligned_cols=332 Identities=36% Similarity=0.651 Sum_probs=290.8
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCCC
Q 011767 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (478)
Q Consensus 82 ~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~~ 161 (478)
.|||+||||+++||.+|||+|||+||++||||+++ +++|+++|++|++||+||+||.+|+.||++|..+.... + .
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~-~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~--~--~ 77 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAG--G--G 77 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCC-cHHHHHHHHHHHHHHHHhchhhhhhhhhccCCcccccc--C--C
Confidence 69999999999999999999999999999999998 57899999999999999999999999999976421100 0 0
Q ss_pred CCCccccCCCCCccccccccccccccchhcccccCc--------cccCCCceEEEEeeeehhhccCccccccccceeccC
Q 011767 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE--------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (478)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~F~~~--------~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~C~ 233 (478)
.++|. .+| ++|.++|+++|++. ...+++|+.+.|.|||+|+|.|+++++.+++.+.|+
T Consensus 78 ~~g~~-----~~f---------~~~~d~f~~ffgg~g~~~~~~~~~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~ 143 (378)
T PRK14278 78 GGGFG-----GGF---------GGLGDVFEAFFGGGAASRGPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCD 143 (378)
T ss_pred CCCCC-----cCc---------CchhHHHHHHhCCCCCCCCCccCCCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCC
Confidence 01110 011 12345566666521 124688999999999999999999999999999999
Q ss_pred CCCCCCccCCCcccccCCcccccEEEcC--------CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCcCC
Q 011767 234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (478)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G~~ 305 (478)
.|+|+|........+|+.|+|+|++... ....+|+.|+|+|++++++|+.|.|.|++.+.++++|.||||++
T Consensus 144 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~ 223 (378)
T PRK14278 144 RCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVG 223 (378)
T ss_pred CCcCccCCCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCccceeeCCCCCCCCCceeEecceEEEEEECCCCC
Confidence 9999999988888999999999986432 13679999999999999999999999999999999999999999
Q ss_pred CCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecC-CCEEEEEeCCCCCCC
Q 011767 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTL-SGKVQVKIPKGVQPG 384 (478)
Q Consensus 306 ~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tl-dG~~~v~ip~g~~~g 384 (478)
+|++|+|+|+|++.+.+..+|||+|+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+|| ++.++|+||+++++|
T Consensus 224 ~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld~~~i~v~ip~g~~~g 303 (378)
T PRK14278 224 DGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPPGTQPG 303 (378)
T ss_pred CCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCCCCeEEEEeCCCcCCC
Confidence 9999999999999877778899999999999999999999999999999999999999999999 567899999999999
Q ss_pred cEEEEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHHh
Q 011767 385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (478)
Q Consensus 385 ~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~~ 433 (478)
++++|+|+|||..+. ..+|||||+|+|.||+.||++|+++|+++++..
T Consensus 304 ~~lrl~g~G~p~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~~~~~~ 351 (378)
T PRK14278 304 SVITLRGRGMPHLRS-GGRGDLHAHVEVVVPTRLDHEDIELLRELKALR 351 (378)
T ss_pred cEEEECCCCCCCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Confidence 999999999997532 247999999999999999999999999999753
No 11
>PRK14276 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.6e-76 Score=609.26 Aligned_cols=357 Identities=38% Similarity=0.682 Sum_probs=301.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCC
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~ 160 (478)
..|||+||||+++||.+|||+|||+||++||||++++ ++|+++|++|++||+||+||.+|++||++|+++......+..
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~-~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~~~ 81 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE-PGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGA 81 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-cCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCCCC
Confidence 3699999999999999999999999999999999974 778999999999999999999999999998765432100000
Q ss_pred CCCCccccCCCCCccccccccccccccchhcccccCc-------cccCCCceEEEEeeeehhhccCccccccccceeccC
Q 011767 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (478)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~F~~~-------~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~C~ 233 (478)
+++ .+|.. ...| .+|.++|+++|++. .+.+++|+.+.|.|||+|+|.|+++++.+.+.+.|+
T Consensus 82 --~~~------~~~~~--~~~~-~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~ 150 (380)
T PRK14276 82 --GGF------GGFDG--SGGF-GGFEDIFSSFFGGGGARRNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCH 150 (380)
T ss_pred --CCC------CCccc--cccc-cchhhHHHHHhCccccccCcCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccCC
Confidence 000 01100 0011 13556777777521 134688999999999999999999999999999999
Q ss_pred CCCCCCccCCCcccccCCcccccEEEcC--------CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCcCC
Q 011767 234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (478)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G~~ 305 (478)
.|+|+|........+|+.|+|+|.+... ..+.+|+.|+|+|++++.+|..|.|.|++.+.++++|.||||++
T Consensus 151 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~ 230 (380)
T PRK14276 151 TCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVE 230 (380)
T ss_pred CCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCccccCCCCCCCCceEEEEEEEEEEEeCCCcc
Confidence 9999999988888999999999987532 13679999999999999999999999999999999999999999
Q ss_pred CCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCEEEEEeCCCCCCCc
Q 011767 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQ 385 (478)
Q Consensus 306 ~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~ 385 (478)
+|++|+|+|+|++...+..+|||||+|+|+||+.|+|+|+||+++++|+|.+|++|++++|+|+||+++|+||+++++|+
T Consensus 231 ~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tldg~i~v~ip~g~~~g~ 310 (380)
T PRK14276 231 TGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGDVELKIPAGTQTGK 310 (380)
T ss_pred CCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCCCcEEEEECCCCCCCC
Confidence 99999999999998766778999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHHhccCCCCCccchhHHHHHH
Q 011767 386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEEINNENNTSAEENWWQRIV 451 (478)
Q Consensus 386 ~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (478)
+++|+|+|||..+. ..+|||||+|+|.||+.||++|+++|++|++....+ ........||..+.
T Consensus 311 ~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~~l~~~~~~~~~~-~~~~~~~~~~~~~~ 374 (380)
T PRK14276 311 KFRLRGKGAPKLRG-GGNGDQHVTVNIVTPTKLNDAQKEALKAFAKASGEK-DVNPKKKGFFDKVK 374 (380)
T ss_pred EEEECCCCcCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhcccc-ccCcccccHHHHHH
Confidence 99999999997643 246999999999999999999999999999754211 11112236666654
No 12
>PRK14285 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2e-76 Score=606.60 Aligned_cols=341 Identities=35% Similarity=0.659 Sum_probs=298.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCCC
Q 011767 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (478)
Q Consensus 82 ~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~~ 161 (478)
.|||++|||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||++|+.+.... ++
T Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~----~~ 78 (365)
T PRK14285 3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGG----GG 78 (365)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccC----CC
Confidence 69999999999999999999999999999999998778899999999999999999999999999987654211 01
Q ss_pred CCCccccCCCCCccccccccccccccchhcccccCc-------cccCCCceEEEEeeeehhhccCccccccccceeccCC
Q 011767 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS 234 (478)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~F~~~-------~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~C~~ 234 (478)
++++. ++.++|... | .+|.++|+++|++. .+.+++|+++.|.|||+|+|.|+++++.+++.+.|..
T Consensus 79 ~~~~~--~g~~~~~~~----~-~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~ 151 (365)
T PRK14285 79 FEGFS--GGFSGFSDI----F-EDFGDIFDSFFTGNRGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCES 151 (365)
T ss_pred ccccC--CCccccccc----c-ccHHHHHHHhhcCCcCCCCCcCCCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccCCC
Confidence 11110 000111111 1 23567777777631 1347889999999999999999999999999999999
Q ss_pred CCCCCccCCCcccccCCcccccEEEcC----CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCcCCCCCEE
Q 011767 235 CHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTI 310 (478)
Q Consensus 235 C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G~~~G~~i 310 (478)
|+|+|........+|+.|+|+|++... +++.+|+.|+|+|++++++|..|+|.|++.+.++++|.||||+++|++|
T Consensus 152 C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i 231 (365)
T PRK14285 152 CLGKKSEKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQI 231 (365)
T ss_pred CCCcccCCCCCCccCCCccCceeEEecCceeEEeeecCCCCCcccccCCCCCCCCCCCEEeccEEEEEEECCCCCCCCEE
Confidence 999999988888999999999987643 3578999999999999999999999999999999999999999999999
Q ss_pred EECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCE-EEEEeCCCCCCCcEEEE
Q 011767 311 RVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLVL 389 (478)
Q Consensus 311 ~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~~i 389 (478)
+|+|+|++.+.+..+|||||+|++++|+.|+|+|+||+++++|||.+|++|+++.|+||||+ ++|+||+++++|++++|
T Consensus 232 ~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~v~V~Ip~g~~~g~~irl 311 (365)
T PRK14285 232 KMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKIKIKIPKGTENDEQIII 311 (365)
T ss_pred EEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCEEEEEeCCCcCCCcEEEE
Confidence 99999999877777899999999999999999999999999999999999999999999995 89999999999999999
Q ss_pred cCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHHhc
Q 011767 390 RGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEEI 434 (478)
Q Consensus 390 ~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~~~ 434 (478)
+|+|||..+.. .+|||||+|+|++|+.|+++|+++|++|++...
T Consensus 312 ~GkG~p~~~~~-~~GDL~V~~~v~~P~~l~~~q~~~l~~l~~~~~ 355 (365)
T PRK14285 312 KNEGMPILHTE-KFGNLILIIKIKTPKNLNSNAIKLLENLSKELK 355 (365)
T ss_pred CCCCccCCCCC-CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHhc
Confidence 99999976432 469999999999999999999999999998654
No 13
>PRK14287 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3e-76 Score=606.58 Aligned_cols=349 Identities=38% Similarity=0.716 Sum_probs=299.2
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCC
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~ 160 (478)
..|||+||||+++||.+|||+|||+||++||||+|+. ++|+++|++|++||+||+||.+|+.||++|.++..... +++
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~-~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~-~~~ 80 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA-PDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGF-GGG 80 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCccccccc-CCC
Confidence 3699999999999999999999999999999999974 78899999999999999999999999999876543110 000
Q ss_pred CCCCccccCCCCCccccccccccccccchhcccccC-------ccccCCCceEEEEeeeehhhccCccccccccceeccC
Q 011767 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (478)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~F~~-------~~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~C~ 233 (478)
++ .+|. +|.++|+.+|++ ..+.+++|+++.|.|||+|+|.|+++++.+.+.+.|+
T Consensus 81 ---~~------~~f~---------~~~d~f~~~fgg~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~ 142 (371)
T PRK14287 81 ---GA------GDFG---------GFSDIFDMFFGGGGGRRNPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCG 142 (371)
T ss_pred ---CC------cccc---------chHHHHHhhhccccCCCCCCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCC
Confidence 00 0111 133455555542 1234689999999999999999999999999999999
Q ss_pred CCCCCCccCCCcccccCCcccccEEEcC--------CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCcCC
Q 011767 234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (478)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G~~ 305 (478)
.|+|+|........+|+.|+|+|++... ..+.+|+.|.|+|.+++.+|..|.|.|++.+.++++|.||||++
T Consensus 143 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~ 222 (371)
T PRK14287 143 TCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGID 222 (371)
T ss_pred CCCCcccCCCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCccccccCCCCCCeeEEeeeEEEEEEECCcCC
Confidence 9999999988888999999999987532 13679999999999999999999999999999999999999999
Q ss_pred CCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCEEEEEeCCCCCCCc
Q 011767 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQ 385 (478)
Q Consensus 306 ~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~ 385 (478)
+|++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+|+||+++|+||+++++|+
T Consensus 223 ~G~~i~~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~ 302 (371)
T PRK14287 223 HGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGKVKLKIPAGTQTGT 302 (371)
T ss_pred CCCEEEEccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCCEEEEECCCccCCc
Confidence 99999999999998766789999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHHhccCCCCCccchhHHHHHHH
Q 011767 386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEEINNENNTSAEENWWQRIVE 452 (478)
Q Consensus 386 ~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (478)
+++|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|++.+..+ .......||..+..
T Consensus 303 ~~ri~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~~~~~~~--~~~~~~~~~~~~~~ 366 (371)
T PRK14287 303 SFRLRGKGVPNVHG-RGQGDQHVQVRVVTPKNLTEKEKELMREFAGMSGGR--PDEQNDGFFAKVKR 366 (371)
T ss_pred EEEEcCCCccCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHHhhhccc--cCcccccHHHHHHH
Confidence 99999999997643 246999999999999999999999999999764321 11123467666643
No 14
>PRK14298 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.8e-76 Score=607.58 Aligned_cols=335 Identities=41% Similarity=0.718 Sum_probs=294.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCC
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~ 160 (478)
.+|||+||||+++||.+|||+|||+||++||||+++. ++|+++|++|++||+||+||.+|+.||++|.++.... ++
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~-~~-- 79 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE-PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQ-YS-- 79 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCC-hhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccc-cC--
Confidence 3699999999999999999999999999999999974 7789999999999999999999999999987653321 00
Q ss_pred CCCCccccCCCCCccccccccccccccchhcccccC------ccccCCCceEEEEeeeehhhccCccccccccceeccCC
Q 011767 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS 234 (478)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~F~~------~~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~C~~ 234 (478)
+..+|. . ..| ++|.++|+.+|++ ..+.++.|+++.|.|||+|+|.|+++++.+++.+.|+.
T Consensus 80 ~~~~~~---~-~~~---------~~~~d~f~~~Fgg~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~ 146 (377)
T PRK14298 80 AEDIFR---G-ADF---------GGFGDIFEMFFGGGGRRGRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCST 146 (377)
T ss_pred cccccc---c-CCc---------CcchhhhHhhhcCCCccCCCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCC
Confidence 000111 0 011 1244566666652 12357899999999999999999999999999999999
Q ss_pred CCCCCccCCCcccccCCcccccEEEcC--------CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCcCCC
Q 011767 235 CHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDS 306 (478)
Q Consensus 235 C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G~~~ 306 (478)
|+|+|...+....+|+.|+|+|++... +++.+|+.|+|+|++++.+|..|.|.|++.+.++++|.||||+++
T Consensus 147 C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~ 226 (377)
T PRK14298 147 CSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADS 226 (377)
T ss_pred CCCCcccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccCCCCCCCCCccEEEEEEEEEecCCCCCCC
Confidence 999999988888999999999987532 247899999999999999999999999999999999999999999
Q ss_pred CCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCEEEEEeCCCCCCCcE
Q 011767 307 GDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQL 386 (478)
Q Consensus 307 G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~ 386 (478)
|++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+||||++.|+||+++++|++
T Consensus 227 G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~ 306 (377)
T PRK14298 227 GLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGKVKMNIPPGTQTHSV 306 (377)
T ss_pred CCEEEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCCCEEEEeCCCcccCCE
Confidence 99999999999977778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHHh
Q 011767 387 LVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (478)
Q Consensus 387 ~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~~ 433 (478)
++|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|+++++.+
T Consensus 307 lri~g~G~p~~~~-~~~GDL~V~~~V~~P~~ls~~~~~ll~~l~~~~ 352 (377)
T PRK14298 307 FRLKDKGMPRLHG-HGKGDQLVKVIVKTPTKLTQEQKELLREFDELS 352 (377)
T ss_pred EEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 9999999997643 247999999999999999999999999999753
No 15
>PRK14294 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.6e-76 Score=606.80 Aligned_cols=349 Identities=40% Similarity=0.726 Sum_probs=303.2
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCC
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~ 160 (478)
..|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||++|+++....
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~----- 77 (366)
T PRK14294 3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGT----- 77 (366)
T ss_pred CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCC-----
Confidence 469999999999999999999999999999999998778899999999999999999999999999987654311
Q ss_pred CCCCccccCCCCCccccccccccccccchhccccc-C-c-------cccCCCceEEEEeeeehhhccCccccccccceec
Q 011767 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFE-D-E-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (478)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~F~-~-~-------~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~ 231 (478)
+++++ .+|.++| +.|.++|+++|+ + . ...+++|+++.|.|||+|+|.|+++++.+++.+.
T Consensus 78 ~~~~~------~~~~~~~-----~~~~d~f~~~fg~g~~~~~~~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~ 146 (366)
T PRK14294 78 GFSGF------SGFDDIF-----SSFGDIFEDFFGFGGGRRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLET 146 (366)
T ss_pred CCCCc------Cccccch-----hhhhhhHHHhhccCCCcCCcccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeeeccc
Confidence 01111 0121111 123455655554 1 1 2346889999999999999999999999999999
Q ss_pred cCCCCCCCccCCCcccccCCcccccEEEcC----CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCcCCCC
Q 011767 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSG 307 (478)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G~~~G 307 (478)
|+.|.|+|........+|+.|+|.|.+... +++.+|+.|+|+|++++..|..|.|.|++.+.++++|.||||+++|
T Consensus 147 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G 226 (366)
T PRK14294 147 CEECHGSGCEPGTSPTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTG 226 (366)
T ss_pred CCCCCCccccCCCCcccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCeecCcCCCCCCCceEeecceeEEEecCCCCcCC
Confidence 999999999988888999999999987532 2578999999999999999999999999999999999999999999
Q ss_pred CEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCEEEEEeCCCCCCCcEE
Q 011767 308 DTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLL 387 (478)
Q Consensus 308 ~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~ 387 (478)
++|+|+|+|++...+..+|||+|+|+++||+.|+|+|+||+++++|||.+|++|+++.|+||||+++|+||+++++|+++
T Consensus 227 ~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~i 306 (366)
T PRK14294 227 SRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELKIPKGTQPGDIF 306 (366)
T ss_pred cEEEEccCccCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCcEEEEECCCcCCCCEE
Confidence 99999999998777788999999999999999999999999999999999999999999999999899999999999999
Q ss_pred EEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHHhccCCCCCccchhHHH
Q 011767 388 VLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEEINNENNTSAEENWWQ 448 (478)
Q Consensus 388 ~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~~~~~~~~~~~~~~~~~ 448 (478)
+|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|+..+. +..+.+..+||.
T Consensus 307 ri~G~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~~~~--~~~~~~~~~~~~ 364 (366)
T PRK14294 307 RFKGKGIPSLRG-GGRGDQIIEVEVKVPTRLTKKQEELLTEFARLES--EKIGNKLRNLFK 364 (366)
T ss_pred EECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHhcc--ccHHHHHHHHhh
Confidence 999999997643 2479999999999999999999999999998643 233455567764
No 16
>PRK14297 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5.8e-76 Score=607.06 Aligned_cols=340 Identities=39% Similarity=0.743 Sum_probs=296.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCC
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~ 160 (478)
..|||+||||+++|+.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|++||++|..+..... +.
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~--~~ 80 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAG--GF 80 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccC--CC
Confidence 3699999999999999999999999999999999987788999999999999999999999999999876543210 00
Q ss_pred CCCCccccCCCCCccccccccccccccchhcccccC---------ccccCCCceEEEEeeeehhhccCccccccccceec
Q 011767 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED---------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (478)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~F~~---------~~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~ 231 (478)
+.++|. +|. + ..+ .+|.++|+++|++ ..+.+++|+++.|.|||+|+|.|+++++.+.+.+.
T Consensus 81 ~~~~~~------~~~--~-~~~-~~~~d~f~~~fgg~~g~~~~~~~~~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~ 150 (380)
T PRK14297 81 GSGGFG------GFD--F-SDM-GGFGDIFDSFFGGGFGSSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNEN 150 (380)
T ss_pred CCCCCC------CcC--c-ccc-cchhHHHHHHhccCccccccccCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeeecc
Confidence 001110 110 0 000 1244566666642 12346889999999999999999999999999999
Q ss_pred cCCCCCCCccCCCcccccCCcccccEEEcC--------CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCc
Q 011767 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG 303 (478)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G 303 (478)
|+.|+|+|...+....+|+.|+|.|++... ..+.+|+.|+|+|.+++.+|..|+|.|++.+.++++|.||||
T Consensus 151 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G 230 (380)
T PRK14297 151 CETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAG 230 (380)
T ss_pred CCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcCCCCCCCCCCeEEEeEeEEEEEeCCC
Confidence 999999999988888999999999987531 247899999999999999999999999999999999999999
Q ss_pred CCCCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCEEEEEeCCCCCC
Q 011767 304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQP 383 (478)
Q Consensus 304 ~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~ 383 (478)
+++|++|+++|+|++...+..+|||||+|+|++|+.|+|+|+||+++++|+|.+|++|+++.|+|+||+++|+||+++++
T Consensus 231 ~~~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~~~v~ip~g~~~ 310 (380)
T PRK14297 231 VDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGEVKYEVPAGTQP 310 (380)
T ss_pred CCCCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCCcEEEEECCCcCC
Confidence 99999999999999877677899999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHHh
Q 011767 384 GQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (478)
Q Consensus 384 g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~~ 433 (478)
|++++|+|+|||..+. ..+|||||+|+|+||+.||++|+++|++|++.+
T Consensus 311 g~~~ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~~~ 359 (380)
T PRK14297 311 GTVFRLKGKGVPRVNS-TGRGNQYVTVIVDIPKKLNSKQKEALTMFMEAS 359 (380)
T ss_pred CCEEEEcCCCcCCCCC-CCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHhc
Confidence 9999999999997532 247999999999999999999999999999865
No 17
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=100.00 E-value=2.5e-76 Score=612.65 Aligned_cols=326 Identities=30% Similarity=0.530 Sum_probs=284.3
Q ss_pred CCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCc
Q 011767 76 SCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENE 155 (478)
Q Consensus 76 ~~~~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~ 155 (478)
+..+...|||+||||+++||.+|||+|||+||++||||++++ .++|++|++||+||+||.+|+.||++|..+..+.
T Consensus 22 ~~~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~----~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~ 97 (421)
T PTZ00037 22 KREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGG 97 (421)
T ss_pred cccccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch----HHHHHHHHHHHHHhccHHHHHHHhhhcchhcccC
Confidence 333456899999999999999999999999999999999853 4899999999999999999999999976543210
Q ss_pred ccCCCCCCCccccCCCCCccccccccccccccchhcccccC----ccccCCCceEEEEeeeehhhccCccccccccceec
Q 011767 156 KYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED----ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (478)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~F~~----~~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~ 231 (478)
. +++ +|.++|+.+|++ ....+++|+.+.|.|||+|+|.|+++++.+.+.+.
T Consensus 98 ---------~---~~~-------------d~~d~f~~~Fggg~~~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~ 152 (421)
T PTZ00037 98 ---------E---QPA-------------DASDLFDLIFGGGRKPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVI 152 (421)
T ss_pred ---------C---CCc-------------chhhhHHHhhccccccccccCCCCEEEEeeeeHHHHhCCCceEEEeecccc
Confidence 0 000 122344444442 12356899999999999999999999999999999
Q ss_pred cCCCCCCCccCCCcccccCCcccccEEEcC--------CccccCCCcCCceEEee--eccccccCCceEeceEEEEEEec
Q 011767 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIK--DHCMTCKGSGVVDGVKEVKVTIP 301 (478)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~i~--~~C~~C~G~G~~~~~k~~~V~Ip 301 (478)
|+.|+|+|.... ...+|+.|+|+|.++.. .++.+|+.|+|+|++++ ++|..|+|.|++.+.++++|.||
T Consensus 153 C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~~~~~l~V~Ip 231 (421)
T PTZ00037 153 CANCEGHGGPKD-AFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNID 231 (421)
T ss_pred ccccCCCCCCCC-CCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceeccccccCCcCCCcceeeeeeEEEEeeC
Confidence 999999998654 57899999999975321 24779999999999985 89999999999999999999999
Q ss_pred CcCCCCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCE-EEEEeCCC
Q 011767 302 AGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG 380 (478)
Q Consensus 302 ~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g 380 (478)
||+.+|++|+|+|+|+..+ +..||||||+|+++||+.|+|+|+||+++++|+|.+||+|+++.|+||||+ +.|+||++
T Consensus 232 ~G~~dG~~I~~~G~Gd~~~-~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g 310 (421)
T PTZ00037 232 KGVPNQHKITFHGEADEKP-NEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPG 310 (421)
T ss_pred CCCCCCcEEEEecccCCCC-CCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCC
Confidence 9999999999999999975 578999999999999999999999999999999999999999999999996 89999988
Q ss_pred --CCCCcEEEEcCCCccCCCCCCCCCcEEEEEEEeCC--CCCCHHHHHHHHHHHHH
Q 011767 381 --VQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFP--TALNERQRAILEEFAEE 432 (478)
Q Consensus 381 --~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P--~~ls~~q~~ll~~~~~~ 432 (478)
++||++++|+|+|||..+....+|||||+|+|.|| +.||++|+++|++|+..
T Consensus 311 ~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~~~V~~P~~~~Ls~~qk~ll~~l~~~ 366 (421)
T PTZ00037 311 EVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKSLFPQ 366 (421)
T ss_pred cccCCCcEEEeCCCCcccCCCCCCCCCEEEEEEEEcCCCCCCCHHHHHHHHHhccC
Confidence 99999999999999976443457999999999999 99999999999999863
No 18
>PRK14280 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.4e-75 Score=603.01 Aligned_cols=336 Identities=43% Similarity=0.764 Sum_probs=293.8
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCCC
Q 011767 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (478)
Q Consensus 82 ~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~~ 161 (478)
.|||+||||+++|+.+|||+|||+||++||||+++. +.|+++|++|++||+||+||.+|++||++|.++..... +.
T Consensus 4 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~-~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~-~~-- 79 (376)
T PRK14280 4 RDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKE-EGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGF-GG-- 79 (376)
T ss_pred CChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCc-CC--
Confidence 699999999999999999999999999999999974 67899999999999999999999999999876543210 00
Q ss_pred CCCccccCCCCCccccccccccccccchhcccccCc-------cccCCCceEEEEeeeehhhccCccccccccceeccCC
Q 011767 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS 234 (478)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~F~~~-------~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~C~~ 234 (478)
.+|. +.+|.. .| +|.++|+.+|++. .+.+++|+.+.|.|||+|+|.|+++++.+.+.+.|+.
T Consensus 80 -~~~~----~~~~~~----~~--~~~d~f~~~fgg~~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~ 148 (376)
T PRK14280 80 -GGFG----GGDFGG----GF--GFEDIFSSFFGGGGRRRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDT 148 (376)
T ss_pred -CCCC----CCCccc----cc--cchhhHHHHhCCccccCcccccccccCEEEEEEEEHHHHhCCceeEEEEeeeccCCC
Confidence 0010 001110 01 2445666666521 1346889999999999999999999999999999999
Q ss_pred CCCCCccCCCcccccCCcccccEEEcC--------CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCcCCC
Q 011767 235 CHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDS 306 (478)
Q Consensus 235 C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G~~~ 306 (478)
|+|+|........+|+.|+|+|.+... ..+.+|+.|+|+|++++.+|..|.|.|++.+.++++|.||+|+++
T Consensus 149 C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~ 228 (376)
T PRK14280 149 CHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDN 228 (376)
T ss_pred CCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceecCCCCCCCCceEEEEEEEEEEEeCCCCcC
Confidence 999999988888999999999987532 136799999999999999999999999999999999999999999
Q ss_pred CCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCEEEEEeCCCCCCCcE
Q 011767 307 GDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQL 386 (478)
Q Consensus 307 G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~ 386 (478)
|++|+|+|+|++...+..+|||||+|+|+||+.|+|+|+||+++++|||.+|++|+++.|+||||++.|+||+++++|++
T Consensus 229 G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip~g~~~g~~ 308 (376)
T PRK14280 229 GQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGKVKLKIPAGTQTGTQ 308 (376)
T ss_pred CcEEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCceEEEEECCCCCCCcE
Confidence 99999999999987677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHHh
Q 011767 387 LVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (478)
Q Consensus 387 ~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~~ 433 (478)
++|+|+|||..+. ..+|||||+|+|.+|+.||++|+++|++|++.+
T Consensus 309 ~~i~g~G~p~~~~-~~~GDL~v~~~v~~P~~Ls~~q~~~l~~l~~~~ 354 (376)
T PRK14280 309 FRLKGKGVPNVRG-YGQGDQYVVVRVVTPTKLTDRQKELLREFAELS 354 (376)
T ss_pred EEEcCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 9999999997633 247999999999999999999999999999753
No 19
>PRK10767 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.9e-75 Score=599.77 Aligned_cols=336 Identities=45% Similarity=0.838 Sum_probs=294.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCC
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~ 160 (478)
..|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||++|+||.+|+.||+++..+..... +
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~-~-- 79 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGG-G-- 79 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCC-C--
Confidence 4699999999999999999999999999999999987778999999999999999999999999999876543210 0
Q ss_pred CCCCccccCCCCCccccccccccccccchhcccccC------ccccCCCceEEEEeeeehhhccCccccccccceeccCC
Q 011767 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS 234 (478)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~F~~------~~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~C~~ 234 (478)
.++|. +.++| ++.|.++|+.+|++ ..+.+++|+.+.|.|||+|+|.|+++++.+++.+.|+.
T Consensus 80 -~~~~~---~~~~~--------~~~f~~~f~~~fgg~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~ 147 (371)
T PRK10767 80 -GGGFG---GGGGF--------GDIFGDIFGDIFGGGRGGGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDT 147 (371)
T ss_pred -CCCCC---Ccccc--------ccchhhhhhhhccCCccccCCCCCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCC
Confidence 01110 00011 12244555555542 12357899999999999999999999999999999999
Q ss_pred CCCCCccCCCcccccCCcccccEEEcC----CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCcCCCCCEE
Q 011767 235 CHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTI 310 (478)
Q Consensus 235 C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G~~~G~~i 310 (478)
|+|+|.........|+.|+|+|++... .++.+|+.|+|+|++++.+|..|.|.|++.+.+.++|.||||+.+|++|
T Consensus 148 C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i 227 (371)
T PRK10767 148 CHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRI 227 (371)
T ss_pred CCCcccCCCCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeECCCCCCCCCCCceEeeeeeEEEecCCCCCCCcEE
Confidence 999999988888899999999987532 2477999999999999999999999999999999999999999999999
Q ss_pred EECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCEEEEEeCCCCCCCcEEEEc
Q 011767 311 RVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLR 390 (478)
Q Consensus 311 ~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~~i~ 390 (478)
+|+|+|++...+..+|||||+|+++||+.|+|+|+||+++++|++.+|++|+++.|+||||.++|+||+++++|++++|+
T Consensus 228 ~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~~~~i~ 307 (371)
T PRK10767 228 RLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVKLKIPEGTQTGKLFRLR 307 (371)
T ss_pred EEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCcEEEEeCCCCCCCCEEEEC
Confidence 99999999766778999999999999999999999999999999999999999999999999899999999999999999
Q ss_pred CCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHH
Q 011767 391 GKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEE 432 (478)
Q Consensus 391 g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~ 432 (478)
|+|||..+. ..+|||||+|+|.+|+.|+++|+++|+++++.
T Consensus 308 g~G~p~~~~-~~~GDL~v~~~v~~P~~l~~~~~~ll~~l~~~ 348 (371)
T PRK10767 308 GKGVKSVRS-GARGDLYCQVVVETPVNLTKRQKELLEEFEES 348 (371)
T ss_pred CCCcCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 999997533 24799999999999999999999999999974
No 20
>PRK14281 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.7e-75 Score=603.45 Aligned_cols=348 Identities=36% Similarity=0.657 Sum_probs=289.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCCC
Q 011767 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (478)
Q Consensus 82 ~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~~ 161 (478)
.|||+||||+++|+.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||++|..+........ .
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~~~-~ 81 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASG-G 81 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhccccccC-C
Confidence 699999999999999999999999999999999987778999999999999999999999999999876543211000 0
Q ss_pred CCCcccc--CCCCCc---ccccccc--ccccccchhcccccCc-------cccCCCceEEEEeeeehhhccCcccccccc
Q 011767 162 AEGFRYA--GDAEGF---RYAYQTH--FSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFD 227 (478)
Q Consensus 162 ~~~~~~~--~~~~~f---~~~~~~~--f~~~f~~~F~~~F~~~-------~~~~g~di~~~l~ltlee~~~G~~k~v~~~ 227 (478)
..+|... +..+.| .++|+.. ++.....-|...|++. .+.+++|+++.|.|||+|+|.|+++++.++
T Consensus 82 ~~~~~~~~~~~~d~f~~f~~~Fgg~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~ 161 (397)
T PRK14281 82 GPGYGGGGGDFNDIFSAFNDMFGGGARRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKIK 161 (397)
T ss_pred CCCCCcCCCCHHHHHHHHHHHhCCCcccccccccccccccCCCcccccccCCCCCCCEEEEEEeEHHHHhCCeEEEEEEE
Confidence 0111000 001111 1222210 0000000011111111 123688999999999999999999999999
Q ss_pred ceeccCCCCCCCccCCCcccccCCcccccEEEcC--------CccccCCCcCCceEEeeeccccccCCceEeceEEEEEE
Q 011767 228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVT 299 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~ 299 (478)
+.+.|+.|+|+|.... ...+|+.|+|.|.+... ..+.+|+.|+|+|++++++|..|.|.|++.+.++++|.
T Consensus 162 r~~~C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~ 240 (397)
T PRK14281 162 KQVPCKECNGTGSKTG-ATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQGEVTVKVT 240 (397)
T ss_pred eeecCCCCCCcccCCC-CCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeeeCCCCCCCCCCccEecceEEEEe
Confidence 9999999999999876 57899999999987532 13678999999999999999999999999999999999
Q ss_pred ecCcCCCCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCEEEEEeCC
Q 011767 300 IPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPK 379 (478)
Q Consensus 300 Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~ 379 (478)
||||+++|++|+|+|+|++.+.+..+|||||+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+||||++.|+||+
T Consensus 241 Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip~ 320 (397)
T PRK14281 241 VPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGAVKLTIPA 320 (397)
T ss_pred cCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCccEEEEeCC
Confidence 99999999999999999998767789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHH
Q 011767 380 GVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEE 432 (478)
Q Consensus 380 g~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~ 432 (478)
++++|++++|+|+|||..+. ..+|||||+|+|.||+.||++|+++|++|++.
T Consensus 321 g~~~G~~~ri~g~G~P~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~~ 372 (397)
T PRK14281 321 GTQPETMLRIPGKGIGHLRG-SGRGDQYVRVNVFVPKEVSHQDKELLKELKKS 372 (397)
T ss_pred ccCCCcEEEEcCCCCCCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHHhh
Confidence 99999999999999997532 24799999999999999999999999999974
No 21
>PRK14282 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.5e-75 Score=598.22 Aligned_cols=343 Identities=37% Similarity=0.684 Sum_probs=294.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-chHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCC
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA 159 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~-~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~ 159 (478)
..|||+||||+++||.+|||+|||+||++||||+++.+ ++|+++|++|++||+||+||.+|++||++|..+......+.
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~~ 82 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQET 82 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccccccccccC
Confidence 46999999999999999999999999999999999764 67899999999999999999999999999876533110000
Q ss_pred CCCCCccccCCCCCccccccccccccc-cchhcccccC--------ccccCCCceEEEEeeeehhhccCcccccccccee
Q 011767 160 GDAEGFRYAGDAEGFRYAYQTHFSDSF-HKIFSEIFED--------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFV 230 (478)
Q Consensus 160 ~~~~~~~~~~~~~~f~~~~~~~f~~~f-~~~F~~~F~~--------~~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~ 230 (478)
...++| |.++|.+ |.+.| .++|+.+|++ ..+.+++|+++.+.|||+|+|.|+++++.+++.+
T Consensus 83 ~~~g~~--------~~~~~~~-~~~~~~~d~f~~~fgg~~~~~~~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~r~~ 153 (369)
T PRK14282 83 ESGGGF--------FEDIFKD-FENIFNRDIFDIFFGERRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYE 153 (369)
T ss_pred CCCCcc--------ccccccc-ccccccchhhhHhhcccCCcccccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEeeecc
Confidence 000011 1111111 11112 2556666653 1134688999999999999999999999999999
Q ss_pred ccCCCCCCCccCCCcccccCCcccccEEEcC--------CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecC
Q 011767 231 PCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPA 302 (478)
Q Consensus 231 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~ 302 (478)
.|+.|+|+|........+|+.|+|+|.+... ....+|+.|+|+|++++.+|..|.|.|++.+.++++|.|||
T Consensus 154 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~ 233 (369)
T PRK14282 154 TCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPA 233 (369)
T ss_pred cCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCCCCCCCCCCceeEEEEEEEEEEeCC
Confidence 9999999999988888999999999987532 13779999999999999999999999999999999999999
Q ss_pred cCCCCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCE-EEEEeCCCC
Q 011767 303 GVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGV 381 (478)
Q Consensus 303 G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g~ 381 (478)
|+.+|++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||+++++|+|.||++|+++.|+|+||+ ++|+||+++
T Consensus 234 G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~i~v~Ip~g~ 313 (369)
T PRK14282 234 GVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPPGT 313 (369)
T ss_pred CCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCCCCcEEEEEeCCCc
Confidence 9999999999999999877788999999999999999999999999999999999999999999999996 899999999
Q ss_pred CCCcEEEEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHHh
Q 011767 382 QPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (478)
Q Consensus 382 ~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~~ 433 (478)
++|++++|+|+|||..+. ..+|||||+|+|.+|+.|+.+|+++|++|++.+
T Consensus 314 ~~g~~iri~GkG~p~~~~-~~~GDL~V~~~v~~P~~l~~~~~~ll~~l~~~~ 364 (369)
T PRK14282 314 QPETVFRLKGKGLPNMRY-GRRGDLIVNVHVEIPKRLSREERKLLKELAKKR 364 (369)
T ss_pred CCCCEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHhc
Confidence 999999999999996532 246999999999999999999999999998753
No 22
>PRK14300 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.5e-74 Score=589.00 Aligned_cols=338 Identities=38% Similarity=0.716 Sum_probs=291.4
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCCC
Q 011767 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (478)
Q Consensus 82 ~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~~ 161 (478)
.|||+||||+++||.+|||+|||+||++||||+++ ++.|+++|++|++||++|+||.+|+.||++|.++...... .++
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~-~~~ 80 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTD-AKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQS-RGG 80 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhhhHhHhhHHHhccccccccccc-cCC
Confidence 69999999999999999999999999999999997 4678899999999999999999999999998765432100 000
Q ss_pred CCCccccCCCCCccccccccccccccchhcccccCc-------cccCCCceEEEEeeeehhhccCccccccccceeccCC
Q 011767 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS 234 (478)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~F~~~-------~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~C~~ 234 (478)
.+++ .+|. ..+.+.|.++|+.+|++. .+.+++|+.+.|.|||+|+|.|+++++.+.+.+.|+.
T Consensus 81 ~g~~------~~~~----~~~~~~f~~~f~~~~gg~~~~~~~~~~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~ 150 (372)
T PRK14300 81 GGNH------GGFH----PDINDIFGDFFSDFMGGSRRSRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDT 150 (372)
T ss_pred CCCC------Cccc----cchhhhHHHHHHhhcCCCCCCCCCcCCCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCC
Confidence 0000 0110 011122334444444321 1246889999999999999999999999999999999
Q ss_pred CCCCCccCCCcccccCCcccccEEEcC----CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCcCCCCCEE
Q 011767 235 CHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTI 310 (478)
Q Consensus 235 C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G~~~G~~i 310 (478)
|+|+|...+....+|+.|+|+|.+... .+..+|+.|+|+|++++++|.+|+|.|++.+.++++|.||||+++|++|
T Consensus 151 C~G~g~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i 230 (372)
T PRK14300 151 CHGSGSEKGETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRI 230 (372)
T ss_pred CCCcccCCCCCCccCCCccCeEEEEEeeceEEEEEeCCCCCccceEeCCCCCCCCCceEEEeeEEEEEEECCCCCCCcEE
Confidence 999999988888999999999987543 2477999999999999999999999999999999999999999999999
Q ss_pred EECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCC-EEEEEeCCCCCCCcEEEE
Q 011767 311 RVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQPGQLLVL 389 (478)
Q Consensus 311 ~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG-~~~v~ip~g~~~g~~~~i 389 (478)
+++|+|++...+..+|||+|+|+++||+.|+|+|+||+++++|++.+|++|+++.|+|+|| .++|+||+++++|++++|
T Consensus 231 ~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri 310 (372)
T PRK14300 231 RHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRL 310 (372)
T ss_pred EEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEEEEECCccCCCcEEEE
Confidence 9999999977778899999999999999999999999999999999999999999999998 689999999999999999
Q ss_pred cCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHH
Q 011767 390 RGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEE 432 (478)
Q Consensus 390 ~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~ 432 (478)
+|+|||..+. ..+|||||+|+|+||+.||++|+++|++|++.
T Consensus 311 ~g~G~p~~~~-~~~GDL~V~~~v~~P~~ls~~qk~~l~~l~~~ 352 (372)
T PRK14300 311 RSKGMSKMRS-TIRGDMLTHIHVEVPKNLSKRQRELLEEFKKE 352 (372)
T ss_pred CCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 9999997532 24699999999999999999999999999974
No 23
>PRK14291 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3e-73 Score=586.88 Aligned_cols=348 Identities=37% Similarity=0.691 Sum_probs=290.3
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCC
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~ 160 (478)
..|||+||||+++|+.+|||+|||+||++||||+|++ ++|+++|++|++||+||+||.+|+.||+++..+.........
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~-~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~ 80 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQ 80 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-ccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCccc
Confidence 3699999999999999999999999999999999975 788999999999999999999999999998765432110000
Q ss_pred CCCCcc---ccCCCCCccccccccccccccchhccccc--C-----ccccCCCceEEEEeeeehhhccCcccccccccee
Q 011767 161 DAEGFR---YAGDAEGFRYAYQTHFSDSFHKIFSEIFE--D-----ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFV 230 (478)
Q Consensus 161 ~~~~~~---~~~~~~~f~~~~~~~f~~~f~~~F~~~F~--~-----~~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~ 230 (478)
...+|. ..+..+.|.++|+. | +|..+|...++ . ..+.+++|+.+.|.|||+|+|.|+++++.+++.+
T Consensus 81 ~~~~~~~~~~~~~~d~f~~~f~~-f--g~~~~fg~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~ 157 (382)
T PRK14291 81 GQEGFSDFGGGNIEDILEDVFDI-F--GFGDIFGRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYV 157 (382)
T ss_pred cccccccccCCCHHHHHHHHHHh-c--cccccccccccccccccccccccCCCCEEEEEEEEHHHhhCCEEEEEEEeeec
Confidence 001111 00011122222110 1 01111211000 0 1133688999999999999999999999999999
Q ss_pred ccCCCCCCCccCCCcccccCCcccccEEEcC----CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCcCCC
Q 011767 231 PCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDS 306 (478)
Q Consensus 231 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G~~~ 306 (478)
.|..|+|+|........+|+.|+|+|.+... .++.+|+.|+|+| +++.+|..|+|.|++.+.++++|.||||+.+
T Consensus 158 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G-~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~ 236 (382)
T PRK14291 158 PCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEG-VLREPCSKCNGRGLVIKKETIKVRIPPGVDN 236 (382)
T ss_pred cCCCCccccCCCCCCCccCCCCCCceEEEEecceEEEEecCCCCCCce-EEccCCCCCCCCceEEeeeEEEEEeCCCCCC
Confidence 9999999999988888999999999987543 3478999999999 4789999999999999999999999999999
Q ss_pred CCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCE-EEEEeCCCCCCCc
Q 011767 307 GDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQ 385 (478)
Q Consensus 307 G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~ 385 (478)
|++|+|+|+|+.+..++.+|||||+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+|+||+ ++|+||+++++|+
T Consensus 237 G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~l~V~Ip~g~~~G~ 316 (382)
T PRK14291 237 GSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPGTKEGD 316 (382)
T ss_pred CCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCEEEEEECCccCCCC
Confidence 999999999999877888999999999999999999999999999999999999999999999996 7999999999999
Q ss_pred EEEEcCCCccCCCCCCCCCcEEEEEEEeCCC--CCC------HHHHHHHHHHHHHhc
Q 011767 386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT--ALN------ERQRAILEEFAEEEI 434 (478)
Q Consensus 386 ~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~--~ls------~~q~~ll~~~~~~~~ 434 (478)
+++|+|+|||..+. ..+|||||+|+|+||+ .|| ++|+++|++|.+...
T Consensus 317 ~i~i~G~G~p~~~~-~~~GDL~V~~~V~~P~~~~ls~~~~~~~~~~~~~~~l~~~~~ 372 (382)
T PRK14291 317 KIRVPGKGMPRLKG-SGYGDLVVRVHIDVPKISMLSKLMGDGKKAKKLLKELDKLLP 372 (382)
T ss_pred EEEECCCCCCCCCC-CCCCCEEEEEEEEeCCCcCcCccccCCHHHHHHHHHHHhhcC
Confidence 99999999997643 2479999999999998 599 999999999987653
No 24
>PRK14283 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5.6e-73 Score=584.47 Aligned_cols=341 Identities=38% Similarity=0.681 Sum_probs=293.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCC
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~ 160 (478)
..|||+||||+++||.+|||+|||+||++||||+|++ ++|+++|++|++||+||+||.+|++||++|+++.... +..
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~--~~~ 80 (378)
T PRK14283 4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE-EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGF--SQE 80 (378)
T ss_pred cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHhchhHHHHHHhhhcccccccc--ccc
Confidence 5799999999999999999999999999999999974 7899999999999999999999999999987654311 000
Q ss_pred CCCCccccCCCCCccccccccccccccchhccc-ccC---ccccCCCceEEEEeeeehhhccCccccccccceeccCCCC
Q 011767 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEI-FED---ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCH 236 (478)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~-F~~---~~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~C~~C~ 236 (478)
+.|...+..+.|..++ .+|.++|+.+ |++ ..+.+++|+.+++.|||+|+|.|+++++.+++.+.|+.|.
T Consensus 81 --~~~~~~~~~~~~~~~~-----~~~~~~f~~~~fgg~~~~~~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~ 153 (378)
T PRK14283 81 --DIFNNINFEDIFQGFG-----FGIGNIFDMFGFGGGSRHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCN 153 (378)
T ss_pred --ccccccCccccccccc-----cchhhhccccccCCCCCCCccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCC
Confidence 0011000011111111 1233445444 432 1235789999999999999999999999999999999999
Q ss_pred CCCccCCCcccccCCcccccEEEcC--------CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCcCCCCC
Q 011767 237 GRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD 308 (478)
Q Consensus 237 G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G~~~G~ 308 (478)
|+|........+|+.|+|+|.+... ....+|+.|.|+|+.++.+|..|.|.|++.+.+.++|.||||+++|+
T Consensus 154 G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~ 233 (378)
T PRK14283 154 GSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGS 233 (378)
T ss_pred ccccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceecCCCCCCCCCceeeccceeEEEEECCCCCCCc
Confidence 9999988888999999999987532 13679999999999999999999999999999999999999999999
Q ss_pred EEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCEEEEEeCCCCCCCcEEE
Q 011767 309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLV 388 (478)
Q Consensus 309 ~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~~ 388 (478)
+|+|+|+|++...+..+|||+|+|+|++|+.|+|+|+||+++++|+|.+|++|+++.|+|+||.+.|.||+++++|++++
T Consensus 234 ~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~~r 313 (378)
T PRK14283 234 RLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVELKIPAGTQSGTTFR 313 (378)
T ss_pred EEEEeccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCceEEEEeCCCCCCCCEEE
Confidence 99999999987766789999999999999999999999999999999999999999999999998999999999999999
Q ss_pred EcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHH
Q 011767 389 LRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEE 432 (478)
Q Consensus 389 i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~ 432 (478)
|+|+|||..+. ..+|||||+|+|+||+.|+++|+++|++|+..
T Consensus 314 i~g~G~p~~~~-~~~GdL~v~~~v~~P~~l~~~q~~ll~~~~~~ 356 (378)
T PRK14283 314 LKGHGMPSLRW-SGKGNLYVKVKVVVPKKLSPKQKELLREFASI 356 (378)
T ss_pred ECCCCCCCCCC-CCCCCEEEEEEEEeCCCCCHHHHHHHHHHHhh
Confidence 99999997532 24799999999999999999999999999964
No 25
>PRK14290 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5.8e-73 Score=581.82 Aligned_cols=342 Identities=35% Similarity=0.651 Sum_probs=285.4
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc-hHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCC
Q 011767 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (478)
Q Consensus 82 ~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~-~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~ 160 (478)
.|||+||||+++||.+|||+|||+||++||||+++.++ +|+++|++|++||+||+||.+|++||++|..+... +++
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~---~~~ 79 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGA---GGS 79 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCccccc---CCC
Confidence 59999999999999999999999999999999998664 78999999999999999999999999998765421 000
Q ss_pred CC--CCcc-ccCCCCCccccccccccccccchhccc-ccCccccCCCceEEEEeeeehhhccCccccccccceeccCCCC
Q 011767 161 DA--EGFR-YAGDAEGFRYAYQTHFSDSFHKIFSEI-FEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCH 236 (478)
Q Consensus 161 ~~--~~~~-~~~~~~~f~~~~~~~f~~~f~~~F~~~-F~~~~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~C~~C~ 236 (478)
++ ++|. +.+..+.|..||++.++. +.|... .......+++|+++.|.|||+|+|.|+++++.+.+.+.|+.|+
T Consensus 80 ~~~~~~~~~~~~~~d~f~~~fg~~~~~---~~~~~~~~~~~~~~~~~di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C~ 156 (365)
T PRK14290 80 NFNWDNFTHFSDINDIFNQIFGGNFGS---DFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCS 156 (365)
T ss_pred CccccccccccchhHHHHHHhcCcccc---ccccccccccCCCCCCCCEEEEEEecHHHhcCCEEEEEEeeecccCCCCc
Confidence 00 0010 000011222222210000 000000 0001112478999999999999999999999999999999999
Q ss_pred CCCccCCCcccccCCcccccEEEcC--------CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCcCCCCC
Q 011767 237 GRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD 308 (478)
Q Consensus 237 G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G~~~G~ 308 (478)
|+|.... ...+|+.|+|+|++... +...+|+.|.|.|++++.+|..|.|.|++.+.++++|.||||+.+|+
T Consensus 157 G~g~~~~-~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~ 235 (365)
T PRK14290 157 GTGAKNG-KLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKGATDNL 235 (365)
T ss_pred cccCCCC-CCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeEccCCCCCCCCceeEEEeeEEEEEECCCCCCCc
Confidence 9998875 57899999999986532 12578999999999999999999999999999999999999999999
Q ss_pred EEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCEEEEEeCCCCCCCcEEE
Q 011767 309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLV 388 (478)
Q Consensus 309 ~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~~ 388 (478)
+|+|+|+|+. .++.+|||||+|+|++|+.|+|+|+||+++++|+|.+|++|+++.|+|++|.++|+||+++++|++++
T Consensus 236 ~i~~~g~G~~--~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~i~V~Ip~g~~~g~~ir 313 (365)
T PRK14290 236 RLRVKGKGQS--YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREKYNLKIPEGTQPGEVLK 313 (365)
T ss_pred EEEEccccCC--CCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCceEEEEECCccCCCcEEE
Confidence 9999999986 47789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHHh
Q 011767 389 LRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (478)
Q Consensus 389 i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~~ 433 (478)
|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++++..+
T Consensus 314 i~g~G~p~~~~-~~~GDL~V~~~V~~P~~l~~~~~~ll~~~~~~~ 357 (365)
T PRK14290 314 IKGAGMPHLNG-HGSGDLLVRINVEVPKRLTSKQKELIREFFDIK 357 (365)
T ss_pred ECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHhh
Confidence 99999997643 247999999999999999999999999999754
No 26
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=100.00 E-value=8.4e-73 Score=579.60 Aligned_cols=336 Identities=44% Similarity=0.790 Sum_probs=291.8
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCCCC
Q 011767 83 DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDA 162 (478)
Q Consensus 83 ~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~~~ 162 (478)
|||+||||+++|+.+|||+|||+||++||||+++ +++|+++|++|++||+||+||.+|+.||+++..+....... ..
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~--~~ 77 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGG--GG 77 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcC--CC
Confidence 7999999999999999999999999999999997 56789999999999999999999999999987654321100 00
Q ss_pred CCccccCCCCCccccccccccccccchhcccccC---------ccccCCCceEEEEeeeehhhccCccccccccceeccC
Q 011767 163 EGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED---------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (478)
Q Consensus 163 ~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~F~~---------~~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~C~ 233 (478)
++|. +|. ...| ++|.++|+.+|++ ....+++|+.+.|.|||+|+|.|+++++.+++.+.|+
T Consensus 78 ~~~~------~~~---~~~~-~~~~~~f~~~fg~~~g~~~~~~~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~ 147 (354)
T TIGR02349 78 GGFN------GFD---IGFF-GDFGDIFGDFFGGGGGSGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCE 147 (354)
T ss_pred CCcC------Ccc---ccCc-CchhhhHHHHhccCcccCccccCCCCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCC
Confidence 0110 000 0001 1244556666652 1234788999999999999999999999999999999
Q ss_pred CCCCCCccCCCcccccCCcccccEEEcC--------CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCcCC
Q 011767 234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (478)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G~~ 305 (478)
.|+|+|........+|+.|+|+|.+... +.+.+|+.|+|+|++++.+|..|.|.|++.+.++++|.||||++
T Consensus 148 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~ 227 (354)
T TIGR02349 148 TCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVD 227 (354)
T ss_pred CCCCCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecCCCCCCCCCCcEecccceEEEEECCCCC
Confidence 9999999988888999999999986532 13679999999999999999999999999999999999999999
Q ss_pred CCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCEEEEEeCCCCCCCc
Q 011767 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQ 385 (478)
Q Consensus 306 ~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~ 385 (478)
+|++|+|+|+|++...+..+|||+|+|++++|+.|+|+|+||+++++|+|.+|++|+++.|+|+||.++|.||+++++|+
T Consensus 228 ~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~ 307 (354)
T TIGR02349 228 TGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGDVKLKIPAGTQSGT 307 (354)
T ss_pred CCCEEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCCceEEEEECCcccCCc
Confidence 99999999999987667789999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHH
Q 011767 386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEE 432 (478)
Q Consensus 386 ~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~ 432 (478)
+++|+|+|||..+.. .+|||||+|+|.+|+.|+++|+++|+++++.
T Consensus 308 ~~~i~g~G~p~~~~~-~~GDL~i~~~v~~P~~l~~~~~~~l~~~~~~ 353 (354)
T TIGR02349 308 VFRLKGKGVPRLRGN-GRGDLLVTVKVETPKNLSKEQKELLEELAEA 353 (354)
T ss_pred EEEECCCCcCCCCCC-CCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 999999999976432 4799999999999999999999999999853
No 27
>PRK14289 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.4e-72 Score=580.49 Aligned_cols=349 Identities=36% Similarity=0.637 Sum_probs=292.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCC
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~ 160 (478)
..|||++|||+++|+.+|||+|||+||++||||+++++++|+++|++|++||++|+||.+|++||++|..+..... +.+
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~-~~~ 82 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAA-GGG 82 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCC-CCC
Confidence 4799999999999999999999999999999999988888999999999999999999999999999876543210 000
Q ss_pred CCCCccccCCCCCcc---ccccccccccccch--hcccccCccccCCCceEEEEeeeehhhccCccccccccceeccCCC
Q 011767 161 DAEGFRYAGDAEGFR---YAYQTHFSDSFHKI--FSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSC 235 (478)
Q Consensus 161 ~~~~~~~~~~~~~f~---~~~~~~f~~~f~~~--F~~~F~~~~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~C~~C 235 (478)
++++.. .+..+.|. ++|++.|+ ++... |..........+++|+++.+.|||+|+|.|+++++.+++.+.|+.|
T Consensus 83 ~~~~~~-~~~~~~f~~f~~~fg~~~g-g~~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C 160 (386)
T PRK14289 83 GFSGEG-MSMEDIFSMFGDIFGGHGG-GFGGFGGFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHC 160 (386)
T ss_pred CCCCCC-cChhhhhHHhhhhhccccc-CcccccccccccccCCCCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCC
Confidence 110000 00111111 11211110 00000 0000000123468899999999999999999999999999999999
Q ss_pred CCCCccCCCcccccCCcccccEEEcC--------CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCcCCCC
Q 011767 236 HGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSG 307 (478)
Q Consensus 236 ~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G~~~G 307 (478)
+|+|.........|+.|+|.|++... .+..+|+.|+|+|++++..|..|.|.|++.+.++++|.||||+++|
T Consensus 161 ~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G 240 (386)
T PRK14289 161 HGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEG 240 (386)
T ss_pred CCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCC
Confidence 99999988888999999999987532 1377999999999999999999999999999999999999999999
Q ss_pred CEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCEEEEEeCCCCCCCcEE
Q 011767 308 DTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLL 387 (478)
Q Consensus 308 ~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~ 387 (478)
++|+|+|+|++...+..+|||+|+|++++|+.|+|+|+||++++.|+|.+|++|+++.|+|+||+++|.||+++++|+++
T Consensus 241 ~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~~~ 320 (386)
T PRK14289 241 MQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDGKAKVKIEAGTQPGKVL 320 (386)
T ss_pred CEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCCceEEEEECCccCCCcEE
Confidence 99999999998766778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHHh
Q 011767 388 VLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (478)
Q Consensus 388 ~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~~ 433 (478)
+|+|+|||..+. ..+|||||+|+|+||+.||++|+++|++|++..
T Consensus 321 ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~l~~~q~~~l~~l~~~~ 365 (386)
T PRK14289 321 RLRNKGLPSVNG-YGTGDLLVNVSVYIPETLSKEEKQTLEKMENSD 365 (386)
T ss_pred EECCCCcCCCCC-CCCCcEEEEEEEEeCCCCCHHHHHHHHHHHhhc
Confidence 999999997543 247999999999999999999999999999853
No 28
>PRK14293 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.9e-71 Score=572.32 Aligned_cols=332 Identities=39% Similarity=0.733 Sum_probs=288.9
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCCC
Q 011767 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (478)
Q Consensus 82 ~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~~ 161 (478)
.|||+||||+++||.+|||+|||+||++||||+++. +.|+++|++|++||+||+||.+|++||.+|..+..+. .+
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~----~~ 77 (374)
T PRK14293 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKE-PGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGA----AG 77 (374)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-cCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccC----CC
Confidence 599999999999999999999999999999999974 6789999999999999999999999999987643211 00
Q ss_pred CCCccccCCCCCccccccccccccccchhccccc-------------CccccCCCceEEEEeeeehhhccCccccccccc
Q 011767 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFE-------------DETSHFAPDIQVELVLSFAEAAKGCTKHVSFDA 228 (478)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~F~-------------~~~~~~g~di~~~l~ltlee~~~G~~k~v~~~~ 228 (478)
+.++. ....| .++|+++|+ ...+.+++|+++.|.|||+|+|.|+++++.+++
T Consensus 78 ~~~~~---~~~~~------------~d~f~~~fg~~~~~~~~~~~~~~~~~~kg~di~~~l~vsLee~~~G~~k~i~~~r 142 (374)
T PRK14293 78 FPDMG---DMGGF------------ADIFETFFSGFGGAGGQGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPH 142 (374)
T ss_pred cCCcc---cccch------------HHHHHHHhcccCCCCCCCccccccCccCCCCeEEEEEeeHHHHhCCceEEEEeec
Confidence 00000 00011 122222221 012346889999999999999999999999999
Q ss_pred eeccCCCCCCCccCCCcccccCCcccccEEEcC--------CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEe
Q 011767 229 FVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTI 300 (478)
Q Consensus 229 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~I 300 (478)
.+.|..|.|+|........+|+.|+|+|.+... ....+|+.|.|.|++++.+|.+|.|.|++.+.++++|.|
T Consensus 143 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~I 222 (374)
T PRK14293 143 LETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINI 222 (374)
T ss_pred cccCCCCCCcCCCCCCCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEeccCCCCCCCCcccccceEEEEEe
Confidence 999999999999988888999999999986532 136799999999999999999999999999999999999
Q ss_pred cCcCCCCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCEEEEEeCCC
Q 011767 301 PAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKG 380 (478)
Q Consensus 301 p~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g 380 (478)
|||+++|++|+|+|+|++...+..+|||||+|++++|+.|+|+|+||+++++|++.+|++|+++.|+|+||.++|+||++
T Consensus 223 ppG~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~~~i~ip~~ 302 (374)
T PRK14293 223 PAGVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVELTIPAG 302 (374)
T ss_pred CCCCCCCCEEEEccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCCEEEEeCCC
Confidence 99999999999999999876667789999999999999999999999999999999999999999999999989999999
Q ss_pred CCCCcEEEEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHHh
Q 011767 381 VQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (478)
Q Consensus 381 ~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~~ 433 (478)
+++|++++|+|+|||..+....+|||||+|+|+||+.|+++|+++|++|++.+
T Consensus 303 ~~~g~~~ri~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~l~~~~ 355 (374)
T PRK14293 303 TQPNTVLTLENKGVPRLGNPVARGDHLITVKVKIPTRISDEERELLEKLAKIK 355 (374)
T ss_pred CCCCCEEEECCCCCCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 99999999999999976443457999999999999999999999999999764
No 29
>PRK14292 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=9.8e-71 Score=567.12 Aligned_cols=352 Identities=34% Similarity=0.628 Sum_probs=294.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCCC
Q 011767 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (478)
Q Consensus 82 ~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~~ 161 (478)
.|||+||||+++||.+|||+|||+||++||||+++ +++|+++|++|++||+||+||.+|+.||++|..+..+. .++++
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~-~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~-~~~~~ 79 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGM-PGGDP 79 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-ChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccc-cCCcc
Confidence 49999999999999999999999999999999997 47789999999999999999999999999987642110 00000
Q ss_pred CCCccccCCCCCccccccccccccccchhcccccC---------ccccCCCceEEEEeeeehhhccCccccccccceecc
Q 011767 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED---------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC 232 (478)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~F~~---------~~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~C 232 (478)
++++. | ++.++|+.+|++ ..+.++.|+.+.+.|||+|+|.|+++++.+++.+.|
T Consensus 80 ~~~~~-------~----------d~~d~f~~~fg~~~~~~~~~~~~~~~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C 142 (371)
T PRK14292 80 FGGMG-------F----------DPMDIFEQLFGGAGFGGGRGRRGPARGDDLETEARITLEQARAGEEVEVEVDRLTEC 142 (371)
T ss_pred cCccC-------C----------ChHHHHHHhhCCCCcCCCCCcccccCCCCeEEEEeccHHHHcCCeEEEEEEEeeecC
Confidence 01000 0 112334444432 123468899999999999999999999999999999
Q ss_pred CCCCCCCccCCC-cccccCCcccccEEEcC--------CccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCc
Q 011767 233 DSCHGRGFPADA-KTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG 303 (478)
Q Consensus 233 ~~C~G~G~~~~~-~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G 303 (478)
+.|+|+|..... ...+|+.|+|+|.+... ....+|+.|.|.|..++.+|..|.|.|++.+.++++|.||||
T Consensus 143 ~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G 222 (371)
T PRK14292 143 EHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRG 222 (371)
T ss_pred CCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCcccceecCCCCCCCCCceEEeecceEEEEECCC
Confidence 999999998764 37899999999987532 136789999999999999999999999999999999999999
Q ss_pred CCCCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCEEEEEeCCCCCC
Q 011767 304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQP 383 (478)
Q Consensus 304 ~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~ 383 (478)
+.+|++|+|+|+|++.+.+. |||||+|++++|+.|+|+|+||+++++|++.+|++|+++.|+||||+..|+||+++++
T Consensus 223 ~~~G~~i~~~G~G~~~~~~~--GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~~~v~ip~g~~~ 300 (371)
T PRK14292 223 IDEGYRIRVAGMGNEGPGGN--GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQVIEVKPGTQH 300 (371)
T ss_pred CCCCcEEEEecCcCCCCCCC--CCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCCEEEecCCCcCC
Confidence 99999999999999975443 9999999999999999999999999999999999999999999999888999999999
Q ss_pred CcEEEEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHHhccCCCCCccchhHHHHHHHHhcCc
Q 011767 384 GQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEEINNENNTSAEENWWQRIVERVRAP 457 (478)
Q Consensus 384 g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (478)
|++++|+|+|||..+. ..+|||||+|+|++|+.|+++|+++|++|+.....+ ......+||..|..-.++|
T Consensus 301 g~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 371 (371)
T PRK14292 301 GDLHRLRGQGMPRLQG-AGTGDLIVEYEIAVPKQLSPEAREALEAYARAVGDE--VPEPHEGLFDKVGKLFRRP 371 (371)
T ss_pred CcEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhcccc--cCcccccHHHHHHHHhcCC
Confidence 9999999999997532 246999999999999999999999999999653211 1112347777776554443
No 30
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.4e-66 Score=511.59 Aligned_cols=321 Identities=32% Similarity=0.575 Sum_probs=282.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCC
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~ 160 (478)
.+.||+||||+++||.+|||||||+||++||||||++ |.++|++|++||||||||++|.+||++|+++....+++
T Consensus 3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~---~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~-- 77 (337)
T KOG0712|consen 3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD---AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGG-- 77 (337)
T ss_pred ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc---HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCC--
Confidence 3689999999999999999999999999999999975 68999999999999999999999999998776432111
Q ss_pred CCCCccccCCCCCccccccccccccccchhcccccCccccCCCceEEEEeeeehhhccCccccccccceeccCCCCCCCc
Q 011767 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGF 240 (478)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~F~~~~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~C~~C~G~G~ 240 (478)
+++ + .|++||+ | ...+++...+++|+.+.+.|||+|+|.|.++.+.++++.+|+.|.|+|.
T Consensus 78 --~g~-----~-~f~~~F~----------~-g~~~~~~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGg 138 (337)
T KOG0712|consen 78 --GGF-----G-GFSQFFG----------F-GGNGGRGRQRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGG 138 (337)
T ss_pred --CCC-----c-cHHHhcc----------C-CCcCccccccCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCC
Confidence 111 1 1444443 0 0112234556999999999999999999999999999999999999999
Q ss_pred cCCCcccccCCcccccEEEc---------CCccccCCCcCCceEE--eeeccccccCCceEeceEEEEEEecCcCCCCCE
Q 011767 241 PADAKTKICSTCRGIGRVTI---------PPFTSTCSTCKGLGRI--IKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309 (478)
Q Consensus 241 ~~~~~~~~C~~C~G~G~~~~---------~~~~~~C~~C~G~G~~--i~~~C~~C~G~G~~~~~k~~~V~Ip~G~~~G~~ 309 (478)
..+.. ..|+.|+|+|..+. ++++..|..|+|+|.+ .++.|+.|.|.+++...+.++|+|++|++++++
T Consensus 139 ksg~~-~~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~k 217 (337)
T KOG0712|consen 139 KSGSA-PKCTTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQK 217 (337)
T ss_pred CCCCC-CCCCCCCCCCceeEEEeccccccccceeEeccCCCccccccccccCcccccchhhhhhheeeccccCCCcccce
Confidence 87765 48999999998643 2468899999999998 579999999999999999999999999999999
Q ss_pred EEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCE-EEEEeCCC--CCCCcE
Q 011767 310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG--VQPGQL 386 (478)
Q Consensus 310 i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g--~~~g~~ 386 (478)
|++.|++++.+ +..|||+++.+..++|+.|.|.|+||++..+|++.+|++|+.+.+.|+||+ +.+.++|| ++||++
T Consensus 218 i~f~geadea~-g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~ 296 (337)
T KOG0712|consen 218 ITFKGEADEAP-GTKPGDVVLLIDQKEHPGFDRRGSDLYRKLTISLVEALCGFQRVWETLDGRLLKLSSKPGEVISPGDT 296 (337)
T ss_pred eeeeeeeeecC-CCcCccEEEEecccccccceecccccceeeecchhhccccceEEEEccCCceEEEecCCCceeChhHE
Confidence 99999999875 667999999999999999999999999999999999999999999999997 68888886 899999
Q ss_pred EEEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHH
Q 011767 387 LVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFA 430 (478)
Q Consensus 387 ~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~ 430 (478)
++|+|+|||..... +|||||+|+|+||+ +++++..+|++++
T Consensus 297 ~~v~~~gmp~~~~~--~g~lyi~~~v~fp~-~~~~~~~~l~~~l 337 (337)
T KOG0712|consen 297 KRVEGEGMPIFRNP--KGDLYIKFEVKFPK-LSPSQLKMLEDLL 337 (337)
T ss_pred EeecCCCcccccCC--CCcEEEEEEEEcCC-CChHHHHHHHhhC
Confidence 99999999998665 89999999999999 9999999998874
No 31
>PRK14299 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.8e-57 Score=452.21 Aligned_cols=268 Identities=37% Similarity=0.643 Sum_probs=220.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCC
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~ 160 (478)
..|||+||||+++||.+|||+|||+||++||||+++ ++.|+++|++|++||+||+||.+|+.||+++..+......+..
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~~ 81 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPP 81 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCCC
Confidence 469999999999999999999999999999999997 4788999999999999999999999999998764321100000
Q ss_pred -CCCCccccCCCCCccccccccccccccchhcccccC---------------ccccCCCceEEEEeeeehhhccCccccc
Q 011767 161 -DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED---------------ETSHFAPDIQVELVLSFAEAAKGCTKHV 224 (478)
Q Consensus 161 -~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~F~~---------------~~~~~g~di~~~l~ltlee~~~G~~k~v 224 (478)
...++ .+|..+ .+ ++|.++|+++|++ ....++.|+.+.+.|||+|++.|+++.+
T Consensus 82 ~~~~~~------~~~~~~---~~-~~~~d~f~~~fgg~~~~~~~g~~~~~~~~~~~~g~dl~~~l~isL~ea~~G~~~~i 151 (291)
T PRK14299 82 PGPPGG------GDFSGF---NV-GDFSDFFQQLFGGRGGFGGFGDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVV 151 (291)
T ss_pred CCCCCC------CCcccc---Cc-CCHHHHHHHHhCCCCCCCCcccccccccCCCCCCCCEEEEEEecHHHHhCCCeEEE
Confidence 00000 001000 00 1123333333331 1134688999999999999999999887
Q ss_pred cccceeccCCCCCCCccCCCcccccCCcccccEEEcCCccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCcC
Q 011767 225 SFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV 304 (478)
Q Consensus 225 ~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G~ 304 (478)
.+. .++++|.||||+
T Consensus 152 ~l~-----------------------------------------------------------------g~~~~V~Ip~G~ 166 (291)
T PRK14299 152 EVA-----------------------------------------------------------------GERLSVRIPPGV 166 (291)
T ss_pred eeC-----------------------------------------------------------------CEEEEEecCCCc
Confidence 541 136789999999
Q ss_pred CCCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCEEEEEeCCCCCCC
Q 011767 305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPG 384 (478)
Q Consensus 305 ~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g 384 (478)
++|++|+++|+|++. |||+|+|++++|+.|+|+|+||+++++||+.+|++|+++.|+|+||.++|+||+++++|
T Consensus 167 ~~G~~ir~~g~G~~~------GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v~tldG~~~v~ip~~~~~g 240 (291)
T PRK14299 167 REGQVIRLAGKGRQG------GDLYLVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGPVEVTIPPRTQAG 240 (291)
T ss_pred CCCcEEEECCCCCCC------CCEEEEEEEcCCCCeEEECCEEEEEEecCHHHHhCCCEEEEECCCCCEEEEeCCCcCCC
Confidence 999999999999863 99999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHH
Q 011767 385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEE 432 (478)
Q Consensus 385 ~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~ 432 (478)
++++|+|+|||..+ ..+|||||+|+|.+|+.|+++|+++|++|++.
T Consensus 241 ~~~rl~g~G~p~~~--~~~GDL~v~~~V~~P~~l~~~~~~~l~~l~~~ 286 (291)
T PRK14299 241 RKLRLKGKGWPRGP--AGRGDQYAEVRITIPTRPTPEEERLYKQLAEL 286 (291)
T ss_pred CEEEECCCCCCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 99999999999643 34799999999999999999999999999865
No 32
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=100.00 E-value=6.5e-56 Score=445.58 Aligned_cols=283 Identities=31% Similarity=0.604 Sum_probs=231.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCCC
Q 011767 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (478)
Q Consensus 82 ~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~~ 161 (478)
.|||++|||+++||.+|||+|||+||++||||+++. +.++++|++|++||++|+||.+|+.||+++..+... .+++..
T Consensus 4 ~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~-~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~-~~~~~~ 81 (306)
T PRK10266 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKE-PDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDP-QFNRQF 81 (306)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCc-cccccc
Confidence 699999999999999999999999999999999874 678999999999999999999999999986432110 000000
Q ss_pred CCCccccCCCCCccccccccccccccchhcccccC-------ccccCCCceEEEEeeeehhhccCccccccccceeccCC
Q 011767 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS 234 (478)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~F~~-------~~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~C~~ 234 (478)
++ +.+..|. ..+|.++|+.+|+. ....++.|+.+++.|||+|++.|+.+++.+++.+
T Consensus 82 --~~---~~~~~~~-------~~~~~~~f~~~~g~~~~~~~~~~~~kg~di~~~v~isLee~~~G~~k~i~~~~~~---- 145 (306)
T PRK10266 82 --QH---GDGQSFN-------AEDFDDIFSSIFGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPV---- 145 (306)
T ss_pred --cc---CCCCCCC-------CCCHHHHHHHHhCCCCCCCCCCCCCCCCceEEEEEEEHHHhcCCceEEEEEeccc----
Confidence 00 0000110 01344556665553 1234678999999999999999999988876532
Q ss_pred CCCCCccCCCcccccCCcccccEEEcCCccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCcCCCCCEEEECC
Q 011767 235 CHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPE 314 (478)
Q Consensus 235 C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G~~~G~~i~l~g 314 (478)
|. |.|.+. ....++++|.||+|+++|++|+++|
T Consensus 146 ~~-----------------g~G~~~------------------------------~~~~~~~~V~Ip~G~~~G~~i~~~g 178 (306)
T PRK10266 146 YN-----------------AFGMIE------------------------------QEIPKTLNVKIPAGVGNGQRIRLKG 178 (306)
T ss_pred cc-----------------CCCeEE------------------------------EeeeEEEEEEECCCCcCCcEEEEec
Confidence 11 222110 0123679999999999999999999
Q ss_pred CCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCEEEEEeCCCCCCCcEEEEcCCCc
Q 011767 315 AGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGL 394 (478)
Q Consensus 315 ~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~~i~g~G~ 394 (478)
+|++...+..+|||+|+|+++||+.|+|+|+||+++++||+.+|++|+++.|+|+||.+.|+||+++++|++++|+|+||
T Consensus 179 ~G~~~~~~~~~GDl~v~i~v~ph~~f~r~g~DL~~~~~Isl~~al~G~~~~i~~~~g~v~v~ip~g~~~g~~~ri~g~G~ 258 (306)
T PRK10266 179 QGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGL 258 (306)
T ss_pred CCcCCCCCCCCccEEEEEEEcCCCCeEEeCCceEEEEecCHHHHhCCCEEEeeCCCccEEEEeCCCcCCCCEEEECCCCC
Confidence 99987767789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHHH
Q 011767 395 AKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEE 432 (478)
Q Consensus 395 p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~ 432 (478)
|..+ .+|||||+|+|.+|+.|+++|+++|++|++.
T Consensus 259 p~~~---~~GdL~v~~~v~~P~~l~~~q~~l~~~l~~~ 293 (306)
T PRK10266 259 VSKK---QTGDLYAVLKIVMPPKPDEKTAALWQQLADA 293 (306)
T ss_pred CCCC---CCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 9754 3699999999999999999999999999975
No 33
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-41 Score=332.33 Aligned_cols=311 Identities=30% Similarity=0.430 Sum_probs=239.7
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCC
Q 011767 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA 159 (478)
Q Consensus 80 ~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~ 159 (478)
..+|||+||||+++|+..|||+|||+||++||||||+++|.|.+.|++|+.||||||||.+|+.||++|++|.....
T Consensus 14 ~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~--- 90 (336)
T KOG0713|consen 14 AGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDEN--- 90 (336)
T ss_pred cCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhcccc---
Confidence 45799999999999999999999999999999999999999999999999999999999999999999988765421
Q ss_pred CCCCCccccCC-CCCccccccccccccccchhcccccCccccCCCceEEEEeeeehhhccCccccccccceeccCCCCCC
Q 011767 160 GDAEGFRYAGD-AEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGR 238 (478)
Q Consensus 160 ~~~~~~~~~~~-~~~f~~~~~~~f~~~f~~~F~~~F~~~~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~C~~C~G~ 238 (478)
....+ .+. .++|..+|+.. .--|.....+....+|.++...+..++++.|.|........+.+.|. |.|+
T Consensus 91 ~~~~~---g~~~~~~f~~~f~df-----g~~~~g~~~~e~~~~g~~V~~~~e~~~~h~y~~~~~e~~r~~~v~~~-~~g~ 161 (336)
T KOG0713|consen 91 KDGEG---GGGGNDIFSAFFGDF-----GVTVGGNPLEEALPKGSDVSSDLEKQLEHFYMGNFVEEVREKGVYKP-APGT 161 (336)
T ss_pred ccccc---CCcccchHHHhhccc-----ccccCCCcccCCCCCCceEEeehhhchhhhhcccHHHHHhccCceee-cCcc
Confidence 00000 011 24554444311 11111122223467789999999999999999987766655554432 1221
Q ss_pred CccCCCcccccCCcccccEEEcCCccccCCCcCCceEEe-eeccccccCCceEeceEEEEEEecCcCCCCCEEEECCCCC
Q 011767 239 GFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRII-KDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGN 317 (478)
Q Consensus 239 G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i-~~~C~~C~G~G~~~~~k~~~V~Ip~G~~~G~~i~l~g~G~ 317 (478)
- .-.|. - ....+..|.|....+ ...|.+|.+.+...+..+.++.+..|+..|....+..+|.
T Consensus 162 ~------~~~~~-----~------~~~~~~~~~g~~~~~q~~~~~~~~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (336)
T KOG0713|consen 162 R------KCNCR-----L------EMFTQQEGPGRFQMLQEAVCDECPNVKLVLEEDPLEVEFERGDADGPEEIFELEGE 224 (336)
T ss_pred c------ccCCh-----h------hheeeccCCChhhhhhhhhhccCCccceeecCCceeeeeeecccCCceeeeeccCC
Confidence 1 00110 0 112233344444333 4578888888888899999999999999999999999988
Q ss_pred CCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCE-EEEEeCCCCCCCcEEEEcCCCccC
Q 011767 318 AGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAK 396 (478)
Q Consensus 318 ~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~~i~g~G~p~ 396 (478)
+.. -+.|||+++.+..-+|+.|.|+++|+++++.+++.+++.|+..++.++|+. +.++--.++.|+..++..++|||.
T Consensus 225 ~h~-~~~~gD~~f~~~~y~~~~~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~~~~~~r~~~~~p~~~~~~~~~~~~~ 303 (336)
T KOG0713|consen 225 PHI-DGVPGDLFFKIVSYTHPRFERKGDDLYTNVTISLEAALVGFEMEILHLDGHYVEVSRKKITWPGARTRKKGEGMPL 303 (336)
T ss_pred cce-ecccCCceeeeEEecccceecCccchhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhhccccchhhhhhhccchh
Confidence 764 467999999999999999999999999999999999999999999999997 356666678899999999999997
Q ss_pred CCCCCCCCcEEEEEEEeCCCC-CCH
Q 011767 397 NGLFLDHGDQYVRFRVNFPTA-LNE 420 (478)
Q Consensus 397 ~~~~~~~GdL~v~~~V~~P~~-ls~ 420 (478)
.......|++|++|.+.+|.+ ++.
T Consensus 304 l~~~~~~~~~~~t~~~~~~~~~~~~ 328 (336)
T KOG0713|consen 304 LKNRNEKGNLYVTFDVEFPKSSLSD 328 (336)
T ss_pred hhccchhcceeEEecccCcccccch
Confidence 644456799999999999954 665
No 34
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=100.00 E-value=5.6e-40 Score=348.00 Aligned_cols=176 Identities=17% Similarity=0.212 Sum_probs=144.8
Q ss_pred ceEEEEeeeehhhccCccccccccceeccCCCCCCCccCCCcccccCCcccccEEEcCCccccCCCcCCceEEeeecccc
Q 011767 204 DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMT 283 (478)
Q Consensus 204 di~~~l~ltlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~ 283 (478)
++...+.|+|+++|.||++++.+.|.+.| |.|
T Consensus 658 dI~y~l~vtLEeLY~G~tKkIKitR~V~~----g~G-------------------------------------------- 689 (871)
T TIGR03835 658 NLVYEEEVPQILFFNNQIKEIKYTRHTVD----GNT-------------------------------------------- 689 (871)
T ss_pred ceEEecccCHHHHhCCCeEEEEEEEeecc----CCC--------------------------------------------
Confidence 35666688999999999999998776643 111
Q ss_pred ccCCceEeceEEEEEEecCcCCCCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCe
Q 011767 284 CKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGK 363 (478)
Q Consensus 284 C~G~G~~~~~k~~~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~ 363 (478)
...+.+.++++|.||+|+++|++|+|+|+|+.++ ++ +|||||+|+++||+.|+|+|+|||++++|+|.+||+|++
T Consensus 690 ---~ktvkE~ktLeVkIPpGVkdGqkIRf~GeGDegp-gg-~GDLyVvIkVKPHp~FrRdGdDL~~~v~ISL~EALLGgt 764 (871)
T TIGR03835 690 ---ESTTNEAITLEIQLPITSQLNISAIFKGFGHDFG-NG-CGDLKVVFKVIPSNFFQIKNDGLHVAALVDPLVAYNGGI 764 (871)
T ss_pred ---cceeeeeEEEEEecCCCCCCCCEEEeccccCCCC-CC-CCCEEEEEEEcCCCCeEEECCeEEEEEecCHHHHhcCCE
Confidence 1123456799999999999999999999999864 33 499999999999999999999999999999999999999
Q ss_pred EEEecCCCEEEEEeCCCCCCCcEEEEcCCCccCCCCCCCCCcEEEEEEEe-CCCC--CCHHHHHHHHHHHHHhc
Q 011767 364 VDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVN-FPTA--LNERQRAILEEFAEEEI 434 (478)
Q Consensus 364 ~~i~tldG~~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~-~P~~--ls~~q~~ll~~~~~~~~ 434 (478)
+.|+||||++.|+||+++++|++++|+|+|||..+ ..+|||||+|.|. +++. -|.-|-+..-+|+..+.
T Consensus 765 IeIpTLDGrVkLkIPpgTqpGqvLRIkGKGMP~~~--~~RGDLyV~f~V~~~~k~~~~~n~qv~~f~~l~~~e~ 836 (871)
T TIGR03835 765 IDVFGPNKLFNVRIPGGIKVNDQVIFKDLGLTKTK--YDKGSLIVHLYYSSVMKKNDRTNVQVQQFNKLALREY 836 (871)
T ss_pred EEeeCCCCCEEEeeCCCCCCCcEEEECCCCCCCCC--CCCCCEEEEEEEeeccccCCcCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999543 3479999999998 4543 34445555555554443
No 35
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.3e-39 Score=319.68 Aligned_cols=240 Identities=43% Similarity=0.775 Sum_probs=204.9
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCCCC
Q 011767 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (478)
Q Consensus 82 ~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~~~ 161 (478)
.|||+||||+++|+..|||+||++||++||||.|.+ .+|.++|++|.+|||||+|+.+|.+||+++..+. .+
T Consensus 43 ~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~-~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~-------~~ 114 (288)
T KOG0715|consen 43 EDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKD-KEASKKFKEISEAYEILSDEEKRQEYDVYGLEQH-------GE 114 (288)
T ss_pred cchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhcc-------cc
Confidence 399999999999999999999999999999999986 4899999999999999999999999999975430 00
Q ss_pred CCCccccCCCCCccccccccccccccchhcccccC-c-cccCCCceEEEEeeeehhhccCccccccccceeccCCCCCCC
Q 011767 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-E-TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRG 239 (478)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~F~~-~-~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~C~~C~G~G 239 (478)
+ .++++ ++|..+|++ . ....+.++.+.+.+.|+++..|+.+.+.+.....|..|.|.|
T Consensus 115 ~-------~g~~~-------------~~~~~~~~~~~~~~~~~~~~~~d~~~~f~~A~~g~~~~~~~~~~~~~~t~~~~~ 174 (288)
T KOG0715|consen 115 F-------GGNPF-------------DVFLEFFGGKMNKRVPDKDQYYDLSLDFKEAVRGSKKRISFNVLSDCETCFGSG 174 (288)
T ss_pred c-------cCCcc-------------chHHHhhcccccccccCcccccccccCHHHHhhccccceEEEeecccccccCcC
Confidence 0 11121 222233332 1 122356778889999999999999999999999999999999
Q ss_pred ccCCCcccccCCcccccEEE---cCCccc-cCCCcCCceEEeeeccccccCCceEeceEEEEEEecCcCCCCCEEEECCC
Q 011767 240 FPADAKTKICSTCRGIGRVT---IPPFTS-TCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEA 315 (478)
Q Consensus 240 ~~~~~~~~~C~~C~G~G~~~---~~~~~~-~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G~~~G~~i~l~g~ 315 (478)
...+.....|..|.|.|.+. ..++.. +|..|.|.|.++.+.|..|.|.|.+...+.+.|.+|+|+.++.+|++.+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~~~~c~~~~g~~~v~~~k~i~i~~~~g~~~~~~l~~~~~ 254 (288)
T KOG0715|consen 175 AEEGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVLRDNCQACSGAGQVRRAKDIMIVLPAGVRSADTLRFAGH 254 (288)
T ss_pred cccccccccchhhhCcccccccccCCcceeecccccccceeccchHHHhhcchhhhhheeEEeecCcccccccEEEEecC
Confidence 99999999999999999543 233322 69999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHH
Q 011767 316 GNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQ 357 (478)
Q Consensus 316 G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~e 357 (478)
|.. ||+|.+.|.+++.|+|+|.|+++++.|++.+
T Consensus 255 ~~~--------~l~v~~~v~~~~~~~r~~~~i~~~~~i~~~~ 288 (288)
T KOG0715|consen 255 GND--------DLFVRLIVAKSPSFRREGKDILYDAIISFTQ 288 (288)
T ss_pred Ccc--------eEEEEEEeccCcccccccCcccccccccccC
Confidence 753 9999999999999999999999999998753
No 36
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.86 E-value=2.9e-21 Score=192.05 Aligned_cols=264 Identities=30% Similarity=0.474 Sum_probs=171.3
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-chHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccCC
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA 159 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~-~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~~ 159 (478)
..|||++|+|.++|+.+||++||+++|++||||+++.. ..|+++|++|.+||++|+||.+|..||+++.++........
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~~~~ 81 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGGSFS 81 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccccCCCCC
Confidence 46999999999999999999999999999999998765 24556899999999999999999999999875443311000
Q ss_pred CC--CC--CccccCCCCCcccccccc--cccc----------c-cchh-------cccccC-----------ccccCCCc
Q 011767 160 GD--AE--GFRYAGDAEGFRYAYQTH--FSDS----------F-HKIF-------SEIFED-----------ETSHFAPD 204 (478)
Q Consensus 160 ~~--~~--~~~~~~~~~~f~~~~~~~--f~~~----------f-~~~F-------~~~F~~-----------~~~~~g~d 204 (478)
.. .+ .+......+.|..+++.. ++.. + +..| ....+. ....+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
T KOG0714|consen 82 SSFTSELFYFLFRKPDKDFYEFFGVSSPFSGSKKGYRDKNAAPGEEAFKSEGKAFQSLYGPKRKQYDSSGSDRSARQSPP 161 (306)
T ss_pred CCCCCCcceeccCchhhhHHHHhCCCCCCccccccCCccccccCccccccccccccccCCCcccccccccccccccCCCC
Confidence 00 00 000000111222222200 0000 0 0000 000000 00000111
Q ss_pred eEEEEeeeehhhccCccccccccceeccCCCCCCCccCCCcccccCCcccccEEEcCCccccCCCcCCceEEeeeccccc
Q 011767 205 IQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTC 284 (478)
Q Consensus 205 i~~~l~ltlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~C 284 (478)
+...+.+++++.+.|+.+...+.+.. .......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~ 194 (306)
T KOG0714|consen 162 VEHPLRVSLEDLYKGESKKMKISRQS-----------------------------------------------FTSNGRE 194 (306)
T ss_pred ccCCcceeHHHhccccceeeeccccc-----------------------------------------------ccCCccc
Confidence 22222223333333333333222111 0011111
Q ss_pred cCCceEeceEEEEEEecCcCCCCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeec--ccCCHHHHhcCC
Q 011767 285 KGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVD--SNISFTQAILGG 362 (478)
Q Consensus 285 ~G~G~~~~~k~~~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~--~~Isl~eAl~G~ 362 (478)
.....+...+.+++++..|+.+....+|+..+ +..|-++++.+..++|+.|.+.++||... ..|++.+|++|.
T Consensus 195 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~~~ 269 (306)
T KOG0714|consen 195 ----GSSRSRYLSISIKPGWKEGTKITFPEEGDEEP-GILPADIEFVVDEKPHPLFSRDGNDLSYSSGYEISLKEALLGV 269 (306)
T ss_pred ----ccCccceeEEeccCCcccccceeccccccccC-CcCcceeEEEEecCCcccccCCCccceecccceeehhhhhcCc
Confidence 13355678899999999999999999998764 35688999999999999999999999999 999999999999
Q ss_pred eEEEecCCCE-EEEEeC-CCCCCCcEEEEcCCCccC
Q 011767 363 KVDVPTLSGK-VQVKIP-KGVQPGQLLVLRGKGLAK 396 (478)
Q Consensus 363 ~~~i~tldG~-~~v~ip-~g~~~g~~~~i~g~G~p~ 396 (478)
...++++++. ..+.+. ..+.++....++++|+|.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (306)
T KOG0714|consen 270 TVFVPTLDGRSYSLSINKDLIEPGEEDVIPGEGLPC 305 (306)
T ss_pred ceeeecccCccccCcccccccCCCceeeecCCCCCC
Confidence 9999999986 344444 567899999999999985
No 37
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=99.84 E-value=5.2e-21 Score=155.08 Aligned_cols=80 Identities=43% Similarity=0.783 Sum_probs=69.5
Q ss_pred ceeecccCCHHHHhcCCeEEEecCCC-EEEEEeCCCCCCCcEEEEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHH
Q 011767 346 DVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRA 424 (478)
Q Consensus 346 DL~~~~~Isl~eAl~G~~~~i~tldG-~~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ 424 (478)
||+++++|++++|++|++++|+|+|| .++|+||+++++|++++|+|+|||.......+|||||+|+|.||++||++|++
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~qk~ 80 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLSPEQKE 80 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTSHHHHH
T ss_pred CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHhc
Confidence 89999999999999999999999999 78999999999999999999999987554568999999999999999999998
Q ss_pred H
Q 011767 425 I 425 (478)
Q Consensus 425 l 425 (478)
|
T Consensus 81 l 81 (81)
T PF01556_consen 81 L 81 (81)
T ss_dssp H
T ss_pred C
Confidence 6
No 38
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.75 E-value=6.9e-19 Score=167.79 Aligned_cols=72 Identities=49% Similarity=0.808 Sum_probs=68.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCC
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS 152 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~ 152 (478)
..|+|+|||++++|+.++||||||+||++||||+++++|++.++|++||+||++|+||.+|..||.+|+.+.
T Consensus 30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l 101 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGL 101 (279)
T ss_pred hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHH
Confidence 579999999999999999999999999999999999999999999999999999999999999999976553
No 39
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.72 E-value=6e-17 Score=153.96 Aligned_cols=69 Identities=55% Similarity=0.885 Sum_probs=65.0
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCch-HHHHHHHHHHHHHhhhcchhhhhhhccc
Q 011767 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS-AKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (478)
Q Consensus 80 ~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~-a~~~f~~i~~Ay~vL~dp~~R~~yD~~~ 148 (478)
...+||+||||+++|+..||++|||++|++||||+++.++. +++.|+.|++||++|+|+.+|+.||..+
T Consensus 4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~ 73 (237)
T COG2214 4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIG 73 (237)
T ss_pred hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhc
Confidence 45699999999999999999999999999999999998775 8999999999999999999999999963
No 40
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.72 E-value=5.7e-18 Score=167.00 Aligned_cols=73 Identities=52% Similarity=0.847 Sum_probs=69.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCC
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE 153 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~ 153 (478)
..|||++|||+.+|+..||++|||+.|++||||||++||.|.++|+.+.+||+||+|+.+|+.||.++..+..
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~ 76 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSS 76 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhccc
Confidence 5699999999999999999999999999999999999999999999999999999999999999999866543
No 41
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.70 E-value=9.6e-18 Score=169.63 Aligned_cols=77 Identities=40% Similarity=0.713 Sum_probs=70.0
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---chHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcc
Q 011767 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN---PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEK 156 (478)
Q Consensus 80 ~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~---~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~ 156 (478)
.+.|||.+|+|+++||.+|||+|||++++.|||||..+. ..|++.|+.|.+|||||+||++|++||.+|.+|....+
T Consensus 7 ~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~t~g 86 (546)
T KOG0718|consen 7 DEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLKTEG 86 (546)
T ss_pred chhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhccccccC
Confidence 446999999999999999999999999999999998742 24899999999999999999999999999999987543
No 42
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.70 E-value=2e-17 Score=127.73 Aligned_cols=63 Identities=54% Similarity=0.979 Sum_probs=59.7
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc-hHHHHHHHHHHHHHhhhcchhhhhhh
Q 011767 83 DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYD 145 (478)
Q Consensus 83 ~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~-~a~~~f~~i~~Ay~vL~dp~~R~~yD 145 (478)
|||+||||+++++.++||++|+++++++|||+++++. .+++.|+.|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 5899999999999999999999999999999988754 58899999999999999999999998
No 43
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.68 E-value=1.8e-17 Score=167.77 Aligned_cols=72 Identities=49% Similarity=0.739 Sum_probs=66.5
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-chHHHHHHHHHHHHHhhhcchhhhhhhccccC
Q 011767 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSR 150 (478)
Q Consensus 79 ~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~-~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~ 150 (478)
.+.+.||+||||.++|+..|||++||+||++||||+|+.. .+|.++|+.|+.||+|||||..|+.||.+..+
T Consensus 5 ~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreq 77 (508)
T KOG0717|consen 5 FKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQ 77 (508)
T ss_pred hhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHH
Confidence 3567999999999999999999999999999999998765 46899999999999999999999999998774
No 44
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.68 E-value=2.6e-17 Score=179.76 Aligned_cols=74 Identities=31% Similarity=0.508 Sum_probs=68.2
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCC
Q 011767 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE 153 (478)
Q Consensus 79 ~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~ 153 (478)
....+||+||||+++||..|||+|||+||++||||+++++ .|.++|++|++||+||+||.+|+.||++|..|..
T Consensus 570 ~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~-~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~ 643 (1136)
T PTZ00341 570 IPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN-EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIK 643 (1136)
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhCCHHHHHHHhhccccccC
Confidence 3468999999999999999999999999999999999864 6888999999999999999999999999876644
No 45
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.62 E-value=3.3e-16 Score=145.98 Aligned_cols=70 Identities=49% Similarity=0.797 Sum_probs=64.3
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCchHHHHHHHHHHHHHhhhcchhhhhhhcccc
Q 011767 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANK--NNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (478)
Q Consensus 80 ~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~--~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~ 149 (478)
...|+|+||||.++|+..+|++|||+||+++|||+++ ...+|.++|++|+.||.||+|.++|+.||..|.
T Consensus 12 ~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~ 83 (264)
T KOG0719|consen 12 NKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGS 83 (264)
T ss_pred cccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCC
Confidence 3459999999999999999999999999999999994 345789999999999999999999999999864
No 46
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.62 E-value=2.4e-15 Score=151.91 Aligned_cols=115 Identities=30% Similarity=0.662 Sum_probs=88.9
Q ss_pred ceeccCCCCCCCccCCCc-------ccccCCcccccEEEcCCccccCCCcCCceEEeeeccccccCC-ceEeceE-----
Q 011767 228 AFVPCDSCHGRGFPADAK-------TKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK----- 294 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~-------~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~C~G~-G~~~~~k----- 294 (478)
..++|++|+|+|.....+ ..+|+.|+|+|.+ +..+|++|+|.|++.+..-.+++.+ |+.++++
T Consensus 158 ~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~----i~~pC~~C~G~G~v~~~~~i~V~IPaGv~~g~~ir~~g 233 (371)
T COG0484 158 DPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKI----IKDPCGKCKGKGRVKKKKSISVNIPAGVDDGDRIRLSG 233 (371)
T ss_pred CCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeE----CCCCCCCCCCCCeEeeeeEEEEECCCCCccCCEEEEec
Confidence 678999999999754333 6799999999998 4789999999999765444344333 3222222
Q ss_pred ---------------------------------------------------------EEEEEecCcCCCCCEEEECCCCC
Q 011767 295 ---------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAGN 317 (478)
Q Consensus 295 ---------------------------------------------------------~~~V~Ip~G~~~G~~i~l~g~G~ 317 (478)
.++|+||||+++|++++|+|+|.
T Consensus 234 ~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g~~~l~ip~Gtq~G~~~rl~gkG~ 313 (371)
T COG0484 234 EGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGRVKLKIPAGTQTGEVFRLRGKGM 313 (371)
T ss_pred CcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCCCEEEecCCCCccCcEEEEcCCCc
Confidence 67899999999999999999999
Q ss_pred CCCCCCCCccEEEEEEEecCCCcccCCCc
Q 011767 318 AGGRGRQHGNLFIKLKVADDPIFSRDGAD 346 (478)
Q Consensus 318 ~~~~g~~~GDL~v~i~v~~h~~f~R~G~D 346 (478)
+...+...|||||.|+|.-...+......
T Consensus 314 p~~~~~~~GDl~v~v~v~~P~~ls~~q~~ 342 (371)
T COG0484 314 PKLRSGGRGDLYVRVKVETPKNLSDEQKE 342 (371)
T ss_pred cccCCCCcCCEEEEEEEEcCCCCCHHHHH
Confidence 98777778999999999866654444333
No 47
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.60 E-value=1.4e-15 Score=115.77 Aligned_cols=58 Identities=57% Similarity=0.898 Sum_probs=54.1
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-CchHHHHHHHHHHHHHhhhcch
Q 011767 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN-NPSAKRKFQEIRDAYETLRDSE 139 (478)
Q Consensus 82 ~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~-~~~a~~~f~~i~~Ay~vL~dp~ 139 (478)
.|||+||||+++++.++||+||+++++++|||++++ .+.+.+.|++|++||++|+||.
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCC
Confidence 389999999999999999999999999999999985 4678899999999999999985
No 48
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.57 E-value=4.8e-15 Score=110.67 Aligned_cols=55 Identities=56% Similarity=0.985 Sum_probs=51.6
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhc
Q 011767 83 DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRD 137 (478)
Q Consensus 83 ~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d 137 (478)
|||+||||+++++.++||++|++|++++|||++++.+.+.+.|++|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 6899999999999999999999999999999997646688999999999999986
No 49
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.57 E-value=3.4e-15 Score=146.83 Aligned_cols=69 Identities=48% Similarity=0.747 Sum_probs=63.7
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc---hHHHHHHHHHHHHHhhhcchhhhhhhcc
Q 011767 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP---SAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (478)
Q Consensus 79 ~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~---~a~~~f~~i~~Ay~vL~dp~~R~~yD~~ 147 (478)
+..+|||+||||.++|+..||.||||++|.+||||...+.. .|+++|-.|..|-|||+||++|+.||..
T Consensus 391 s~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnG 462 (504)
T KOG0624|consen 391 SGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNG 462 (504)
T ss_pred hccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCC
Confidence 45689999999999999999999999999999999987643 3889999999999999999999999985
No 50
>PHA03102 Small T antigen; Reviewed
Probab=99.55 E-value=4.1e-15 Score=133.46 Aligned_cols=66 Identities=24% Similarity=0.466 Sum_probs=60.8
Q ss_pred CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCC
Q 011767 82 RDPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (478)
Q Consensus 82 ~~~Y~vLgv~~~a--s~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g 151 (478)
..+|+||||+++| |.+|||+|||++|+++|||++++ +++|++|++||++|+|+.+|..||.++...
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~----~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~ 72 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD----EEKMKELNTLYKKFRESVKSLRDLDGEEDS 72 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch----hHHHHHHHHHHHHHhhHHHhccccccCCcc
Confidence 4789999999999 99999999999999999999754 579999999999999999999999997543
No 51
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.52 E-value=1.5e-14 Score=134.07 Aligned_cols=72 Identities=36% Similarity=0.651 Sum_probs=65.7
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccC
Q 011767 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSR 150 (478)
Q Consensus 79 ~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~ 150 (478)
...-|||+||||+++||.+|||||||+|.++|||||++...+.++.|..|++||+.|+|+..|..|..+|..
T Consensus 96 ~~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~P 167 (230)
T KOG0721|consen 96 RQKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNP 167 (230)
T ss_pred hhcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCC
Confidence 456799999999999999999999999999999999976456678899999999999999999999999753
No 52
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.44 E-value=1.5e-13 Score=126.74 Aligned_cols=66 Identities=32% Similarity=0.539 Sum_probs=58.7
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCch-----HHHHHHHHHHHHHhhhcchhhhhhhcc
Q 011767 82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRR 147 (478)
Q Consensus 82 ~~~Y~vLgv~~~--as~~eIk~ayr~la~~~HPDk~~~~~~-----a~~~f~~i~~Ay~vL~dp~~R~~yD~~ 147 (478)
.|||++|||++. ++..+|+++||+|++++|||+..+.++ +.+.|+.||+||++|+||.+|+.|+-.
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~ 73 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLS 73 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHH
Confidence 389999999995 678999999999999999999865443 567899999999999999999999864
No 53
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.42 E-value=4e-13 Score=138.83 Aligned_cols=120 Identities=25% Similarity=0.507 Sum_probs=89.4
Q ss_pred ceeccCCCCCCCccCCC---------cccccCCcccccEEEcCCccccCCCcCCceEEeeecc--------------ccc
Q 011767 228 AFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHC--------------MTC 284 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C--------------~~C 284 (478)
....|+.|+|+|..... ...+|+.|+|.|.. +...|+.|.|.|.+.+..= ..-
T Consensus 168 ~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~ 243 (369)
T PRK14282 168 GYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKI----PGEYCHECGGSGRIRRRVRTTVKIPAGVEDGTVLRI 243 (369)
T ss_pred CCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCccee----CCCCCCCCCCceeEEEEEEEEEEeCCCCCCCCEEEE
Confidence 45689999999975321 25699999999987 4678999999996532110 111
Q ss_pred cCCce------------Ee-c-------------------------------------eEEEEEEecCcCCCCCEEEECC
Q 011767 285 KGSGV------------VD-G-------------------------------------VKEVKVTIPAGVDSGDTIRVPE 314 (478)
Q Consensus 285 ~G~G~------------~~-~-------------------------------------~k~~~V~Ip~G~~~G~~i~l~g 314 (478)
.|.|. +. . .+.++|.||+|+++|++++++|
T Consensus 244 ~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~i~v~Ip~g~~~g~~iri~G 323 (369)
T PRK14282 244 TGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPPGTQPETVFRLKG 323 (369)
T ss_pred ecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCCCCcEEEEEeCCCcCCCCEEEECC
Confidence 11111 00 0 0058999999999999999999
Q ss_pred CCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecc
Q 011767 315 AGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDS 351 (478)
Q Consensus 315 ~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~ 351 (478)
+|++...+..+|||||+|+|+.|+.|.+++.+|+..+
T Consensus 324 kG~p~~~~~~~GDL~V~~~v~~P~~l~~~~~~ll~~l 360 (369)
T PRK14282 324 KGLPNMRYGRRGDLIVNVHVEIPKRLSREERKLLKEL 360 (369)
T ss_pred CCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 9998654456799999999999999999999987764
No 54
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.42 E-value=2.2e-13 Score=124.91 Aligned_cols=67 Identities=30% Similarity=0.510 Sum_probs=58.3
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCch---HHHHHHHHHHHHHhhhcchhhhhhhccc
Q 011767 82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS---AKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (478)
Q Consensus 82 ~~~Y~vLgv~~~--as~~eIk~ayr~la~~~HPDk~~~~~~---a~~~f~~i~~Ay~vL~dp~~R~~yD~~~ 148 (478)
.|||++|||++. ++..+|+++||+|++++|||++.+..+ +.+.+..||+||+||+||.+|+.|+-..
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l 73 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLLL 73 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHc
Confidence 489999999996 789999999999999999999864322 3345789999999999999999998764
No 55
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.41 E-value=3.8e-13 Score=124.39 Aligned_cols=67 Identities=31% Similarity=0.513 Sum_probs=58.7
Q ss_pred CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCchHHH-----HHHHHHHHHHhhhcchhhhhhhcc
Q 011767 81 KRDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPSAKR-----KFQEIRDAYETLRDSEKRAQYDRR 147 (478)
Q Consensus 81 ~~~~Y~vLgv~~~--as~~eIk~ayr~la~~~HPDk~~~~~~a~~-----~f~~i~~Ay~vL~dp~~R~~yD~~ 147 (478)
..|||++|||++. ++..+|+++||+|++++|||++.+.+++++ .++.||+||++|+||.+|+.|+..
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~ 78 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLH 78 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHH
Confidence 3699999999995 688999999999999999999876655443 458999999999999999999974
No 56
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.40 E-value=4.8e-13 Score=123.23 Aligned_cols=68 Identities=24% Similarity=0.439 Sum_probs=60.5
Q ss_pred CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCch-----HHHHHHHHHHHHHhhhcchhhhhhhccc
Q 011767 81 KRDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (478)
Q Consensus 81 ~~~~Y~vLgv~~~--as~~eIk~ayr~la~~~HPDk~~~~~~-----a~~~f~~i~~Ay~vL~dp~~R~~yD~~~ 148 (478)
..|||++|||++. .+..+|+++||+|++++|||++.+.++ +.+.|..||+||+||+||.+|+.|+-..
T Consensus 3 ~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l 77 (173)
T PRK00294 3 TPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLAL 77 (173)
T ss_pred CCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHh
Confidence 4699999999996 668999999999999999999876553 5668999999999999999999999754
No 57
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.38 E-value=1.1e-12 Score=135.49 Aligned_cols=120 Identities=25% Similarity=0.591 Sum_probs=90.3
Q ss_pred ceeccCCCCCCCccCCC---------cccccCCcccccEEEcCCccccCCCcCCceEEeeecc--------------ccc
Q 011767 228 AFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHC--------------MTC 284 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C--------------~~C 284 (478)
....|+.|+|+|..... ...+|+.|+|.|.. ++..|..|+|.|.+.+..= ..-
T Consensus 164 ~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~ 239 (365)
T PRK14290 164 KLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRI----PEEKCPRCNGTGTVVVNEDISVKIPKGATDNLRLRV 239 (365)
T ss_pred CCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeE----ccCCCCCCCCceeEEEeeEEEEEECCCCCCCcEEEE
Confidence 45689999999964321 24689999999987 4678999999998643111 111
Q ss_pred cCC--------c--eEe-ce------------------------------------EEEEEEecCcCCCCCEEEECCCCC
Q 011767 285 KGS--------G--VVD-GV------------------------------------KEVKVTIPAGVDSGDTIRVPEAGN 317 (478)
Q Consensus 285 ~G~--------G--~~~-~~------------------------------------k~~~V~Ip~G~~~G~~i~l~g~G~ 317 (478)
.|. | ++. .. .+++|.||+|+++|++++++|+|.
T Consensus 240 ~g~G~~~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~i~V~Ip~g~~~g~~iri~g~G~ 319 (365)
T PRK14290 240 KGKGQSYGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREKYNLKIPEGTQPGEVLKIKGAGM 319 (365)
T ss_pred ccccCCCCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCceEEEEECCccCCCcEEEECCCCC
Confidence 111 1 000 00 068999999999999999999999
Q ss_pred CCCCCCCCccEEEEEEEecCCCcccCCCceeecc
Q 011767 318 AGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDS 351 (478)
Q Consensus 318 ~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~ 351 (478)
+...+..+|||||+|+|..++.|.+++.+|+.++
T Consensus 320 p~~~~~~~GDL~V~~~V~~P~~l~~~~~~ll~~~ 353 (365)
T PRK14290 320 PHLNGHGSGDLLVRINVEVPKRLTSKQKELIREF 353 (365)
T ss_pred CCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 8765556899999999999999999999988875
No 58
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.36 E-value=1.5e-12 Score=134.51 Aligned_cols=121 Identities=27% Similarity=0.579 Sum_probs=89.9
Q ss_pred ceeccCCCCCCCccCC-----CcccccCCcccccEEEcCCccccCCCcCCceEEeeecc--------------ccccCCc
Q 011767 228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHC--------------MTCKGSG 288 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C--------------~~C~G~G 288 (478)
....|+.|+|+|.... ....+|+.|+|.|.. +...|..|.|.|.+.+..= ....|.|
T Consensus 160 ~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G 235 (366)
T PRK14294 160 SPTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKV----IVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEG 235 (366)
T ss_pred CcccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCee----cCcCCCCCCCceEeecceeEEEecCCCCcCCcEEEEccCc
Confidence 3468999999997532 235799999999987 4678999999997643111 1111111
Q ss_pred eE------eceE-------------------------------------------EEEEEecCcCCCCCEEEECCCCCCC
Q 011767 289 VV------DGVK-------------------------------------------EVKVTIPAGVDSGDTIRVPEAGNAG 319 (478)
Q Consensus 289 ~~------~~~k-------------------------------------------~~~V~Ip~G~~~G~~i~l~g~G~~~ 319 (478)
.. .++. .++|.||+|+.+|++++++|+|++.
T Consensus 236 ~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~iri~G~G~p~ 315 (366)
T PRK14294 236 EAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELKIPKGTQPGDIFRFKGKGIPS 315 (366)
T ss_pred cCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCcEEEEECCCcCCCCEEEECCCCCCC
Confidence 10 0000 4689999999999999999999986
Q ss_pred CCCCCCccEEEEEEEecCCCcccCCCceeeccc
Q 011767 320 GRGRQHGNLFIKLKVADDPIFSRDGADVYVDSN 352 (478)
Q Consensus 320 ~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~ 352 (478)
..+..+|||||+|+|..|+.|.++..+|+..+.
T Consensus 316 ~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~ 348 (366)
T PRK14294 316 LRGGGRGDQIIEVEVKVPTRLTKKQEELLTEFA 348 (366)
T ss_pred CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence 655568999999999999999999888877654
No 59
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.36 E-value=1.4e-12 Score=135.02 Aligned_cols=120 Identities=27% Similarity=0.567 Sum_probs=88.8
Q ss_pred ceeccCCCCCCCccCC---------CcccccCCcccccEEEcCCccccCCCcCCceEEeeeccccccCC-ceEeceE---
Q 011767 228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK--- 294 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~C~G~-G~~~~~k--- 294 (478)
....|+.|+|+|.... ....+|+.|+|+|.. +...|+.|.|.|.+.+..=...... |+..+.+
T Consensus 157 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~~ 232 (377)
T PRK14298 157 SPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQV----IESPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKL 232 (377)
T ss_pred CCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcc----cCCCCCCCCCccEEEEEEEEEecCCCCCCCCCEEEE
Confidence 3467999999996532 235699999999987 3678999999997643111111100 1110000
Q ss_pred -----------------------------------------------------------EEEEEecCcCCCCCEEEECCC
Q 011767 295 -----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEA 315 (478)
Q Consensus 295 -----------------------------------------------------------~~~V~Ip~G~~~G~~i~l~g~ 315 (478)
.++|.||+|+++|++++++|+
T Consensus 233 ~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~lri~g~ 312 (377)
T PRK14298 233 SGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGKVKMNIPPGTQTHSVFRLKDK 312 (377)
T ss_pred ecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCCCEEEEeCCCcccCCEEEECCC
Confidence 568999999999999999999
Q ss_pred CCCCCCCCCCccEEEEEEEecCCCcccCCCceeecc
Q 011767 316 GNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDS 351 (478)
Q Consensus 316 G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~ 351 (478)
|.+...+...|||||+|+|..++.+.+++.+|+.++
T Consensus 313 G~p~~~~~~~GDL~V~~~V~~P~~ls~~~~~ll~~l 348 (377)
T PRK14298 313 GMPRLHGHGKGDQLVKVIVKTPTKLTQEQKELLREF 348 (377)
T ss_pred CCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 998655556799999999999999999988887765
No 60
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.35 E-value=5.6e-13 Score=134.16 Aligned_cols=69 Identities=45% Similarity=0.719 Sum_probs=65.3
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-chHHHHHHHHHHHHHhhhcchhhhhhhcc
Q 011767 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (478)
Q Consensus 79 ~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~-~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~ 147 (478)
+..+|||.|||+.++|+..|||+|||++|+.+|||++.++ .+++.+|++|-+||.+|+||.+|..||..
T Consensus 370 SkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg 439 (486)
T KOG0550|consen 370 SKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSG 439 (486)
T ss_pred hhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccc
Confidence 3458999999999999999999999999999999999987 67999999999999999999999999986
No 61
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.33 E-value=2.9e-12 Score=132.70 Aligned_cols=121 Identities=27% Similarity=0.599 Sum_probs=89.7
Q ss_pred ceeccCCCCCCCccCC-----CcccccCCcccccEEEcCCccccCCCcCCceEEeeeccccc--------------cCCc
Q 011767 228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTC--------------KGSG 288 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~C--------------~G~G 288 (478)
....|+.|+|+|.... ....+|+.|+|.|.. +...|+.|.|.|.+.+..-... .|.|
T Consensus 158 ~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G 233 (371)
T PRK10767 158 SPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKI----IKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGEG 233 (371)
T ss_pred CCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeE----CCCCCCCCCCCceEeeeeeEEEecCCCCCCCcEEEEecCc
Confidence 3468999999996431 235689999999987 4678999999997643211111 1111
Q ss_pred e------------Ee-ceE------------------------------------EEEEEecCcCCCCCEEEECCCCCCC
Q 011767 289 V------------VD-GVK------------------------------------EVKVTIPAGVDSGDTIRVPEAGNAG 319 (478)
Q Consensus 289 ~------------~~-~~k------------------------------------~~~V~Ip~G~~~G~~i~l~g~G~~~ 319 (478)
. +. ..+ .++|.||+|+.+|++++++|+|.+.
T Consensus 234 ~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~~~~i~g~G~p~ 313 (371)
T PRK10767 234 EAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVKLKIPEGTQTGKLFRLRGKGVKS 313 (371)
T ss_pred cCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCcEEEEeCCCCCCCCEEEECCCCcCC
Confidence 0 00 000 5789999999999999999999986
Q ss_pred CCCCCCccEEEEEEEecCCCcccCCCceeeccc
Q 011767 320 GRGRQHGNLFIKLKVADDPIFSRDGADVYVDSN 352 (478)
Q Consensus 320 ~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~ 352 (478)
..+...|||||+|+|..++.|.+++.+|+.++.
T Consensus 314 ~~~~~~GDL~v~~~v~~P~~l~~~~~~ll~~l~ 346 (371)
T PRK10767 314 VRSGARGDLYCQVVVETPVNLTKRQKELLEEFE 346 (371)
T ss_pred CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence 555567999999999999999999988877753
No 62
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.32 E-value=1.1e-12 Score=133.36 Aligned_cols=68 Identities=35% Similarity=0.592 Sum_probs=64.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhcccc
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~ 149 (478)
..|+|.+|||+.++|.++|||.||++|...|||||. .+.|+|.|+.++.|||+|+|+.+|..||....
T Consensus 234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~-~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~~ 301 (490)
T KOG0720|consen 234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNM-IPRAEEAFKKLQVAFEVIGDSVKRKEYDLELK 301 (490)
T ss_pred CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccC-ChhHHHHHHHHHHHHHHhcchhhhhHHHHHHH
Confidence 579999999999999999999999999999999998 58999999999999999999999999999743
No 63
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.32 E-value=3.6e-12 Score=131.47 Aligned_cols=120 Identities=23% Similarity=0.545 Sum_probs=87.6
Q ss_pred ceeccCCCCCCCccCC-----CcccccCCcccccEEEcCCccccCCCcCCceEEeeeccc--------------cccCC-
Q 011767 228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCM--------------TCKGS- 287 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~--------------~C~G~- 287 (478)
....|+.|+|+|.... ....+|+.|+|.|.+ +..+|..|+|.|.+.+..=. .-.|.
T Consensus 162 ~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G 237 (365)
T PRK14285 162 SPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKI----ISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQIKMRGKG 237 (365)
T ss_pred CCccCCCccCceeEEecCceeEEeeecCCCCCcccc----cCCCCCCCCCCCEEeccEEEEEEECCCCCCCCEEEEeecc
Confidence 3467999999986432 236799999999987 46789999999976421110 11111
Q ss_pred ---------c--eEe-ce-------------------------------------EEEEEEecCcCCCCCEEEECCCCCC
Q 011767 288 ---------G--VVD-GV-------------------------------------KEVKVTIPAGVDSGDTIRVPEAGNA 318 (478)
Q Consensus 288 ---------G--~~~-~~-------------------------------------k~~~V~Ip~G~~~G~~i~l~g~G~~ 318 (478)
| ++. .. +.++|.||+|+++|++++++|+|++
T Consensus 238 ~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~v~V~Ip~g~~~g~~irl~GkG~p 317 (365)
T PRK14285 238 SVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKIKIKIPKGTENDEQIIIKNEGMP 317 (365)
T ss_pred ccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCEEEEEeCCCcCCCcEEEECCCCcc
Confidence 1 000 00 0689999999999999999999998
Q ss_pred CCCCCCCccEEEEEEEecCCCcccCCCceeecc
Q 011767 319 GGRGRQHGNLFIKLKVADDPIFSRDGADVYVDS 351 (478)
Q Consensus 319 ~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~ 351 (478)
...+...|||||+|+|+.|+.|.+++..|+-.+
T Consensus 318 ~~~~~~~GDL~V~~~v~~P~~l~~~q~~~l~~l 350 (365)
T PRK14285 318 ILHTEKFGNLILIIKIKTPKNLNSNAIKLLENL 350 (365)
T ss_pred CCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 655445699999999999999988887666553
No 64
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.30 E-value=1e-12 Score=124.06 Aligned_cols=67 Identities=43% Similarity=0.759 Sum_probs=62.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccc
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~ 148 (478)
..|-|+||||+++|+..||.+|||+||++||||++++ +++.+.|+.|.+||++|.|...|..||-..
T Consensus 32 ~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~-~e~k~~F~~iAtayeilkd~e~rt~ydyal 98 (329)
T KOG0722|consen 32 AENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRD-PESKKLFVKIATAYEILKDNETRTQYDYAL 98 (329)
T ss_pred chhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCC-chhhhhhhhhhcccccccchhhHHhHHHHh
Confidence 3688999999999999999999999999999999986 677799999999999999999999999874
No 65
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.28 E-value=3.7e-12 Score=108.69 Aligned_cols=54 Identities=26% Similarity=0.433 Sum_probs=48.3
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhh
Q 011767 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLR 136 (478)
Q Consensus 79 ~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~ 136 (478)
+...++|++|||++++|.+|||++||+|++++|||+.+ + .+.|++|++||++|.
T Consensus 62 Ms~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgG-s---~~~~~kIneAyevL~ 115 (116)
T PTZ00100 62 MSKSEAYKILNISPTASKERIREAHKQLMLRNHPDNGG-S---TYIASKVNEAKDLLL 115 (116)
T ss_pred CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHHh
Confidence 34479999999999999999999999999999999864 3 578999999999995
No 66
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.27 E-value=8.9e-12 Score=128.94 Aligned_cols=119 Identities=28% Similarity=0.544 Sum_probs=84.8
Q ss_pred ceeccCCCCCCCccCC-----CcccccCCcccccEEEcCCccccCCCcCCceEEeeecc--------------ccccCC-
Q 011767 228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHC--------------MTCKGS- 287 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C--------------~~C~G~- 287 (478)
....|+.|+|+|.... ....+|+.|+|.|.++ ...|+.|.|.|.+.+..= ....|.
T Consensus 160 ~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~----~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G 235 (373)
T PRK14301 160 SPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVI----THPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLRGEG 235 (373)
T ss_pred CCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeeec----CCCCCCCCCCceeccceEEEEEeCCCCcCCCEEEEeccc
Confidence 3468999999996532 2367999999999973 568999999997642110 011111
Q ss_pred ---------c--eEe-ceE------------------------------------EEEEEecCcCCCCCEEEECCCCCCC
Q 011767 288 ---------G--VVD-GVK------------------------------------EVKVTIPAGVDSGDTIRVPEAGNAG 319 (478)
Q Consensus 288 ---------G--~~~-~~k------------------------------------~~~V~Ip~G~~~G~~i~l~g~G~~~ 319 (478)
| ++. ..+ .++|.||+|+++|++++|+|+|.+.
T Consensus 236 ~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~i~v~ip~g~~~g~~~ri~g~G~p~ 315 (373)
T PRK14301 236 EPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPVTLDIPKGTQSGEVFRLRGKGLPY 315 (373)
T ss_pred cCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCccEEEEECCCcCCCcEEEEcCCCCCC
Confidence 1 000 000 5789999999999999999999987
Q ss_pred CCCCCCccEEEEEEEecCCCcccCCCceeec
Q 011767 320 GRGRQHGNLFIKLKVADDPIFSRDGADVYVD 350 (478)
Q Consensus 320 ~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~ 350 (478)
..+...|||||+|+|..++.+..+..+++..
T Consensus 316 ~~~~~~GDL~I~~~V~~P~~l~~~q~~~l~~ 346 (373)
T PRK14301 316 LGSSQKGDLLVEVSVVTPTKLTKRQEELLRE 346 (373)
T ss_pred CCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence 6555689999999999887766655555444
No 67
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.26 E-value=9.9e-12 Score=128.51 Aligned_cols=120 Identities=25% Similarity=0.579 Sum_probs=86.1
Q ss_pred ceeccCCCCCCCccCC---------CcccccCCcccccEEEcCCccccCCCcCCceEEeeeccccc--------------
Q 011767 228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTC-------------- 284 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~C-------------- 284 (478)
....|+.|+|+|.... ....+|+.|+|.|.+ +...|..|.|.|.+....-...
T Consensus 154 ~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~ 229 (371)
T PRK14287 154 KPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKI----IKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRV 229 (371)
T ss_pred CCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCcc----ccccCCCCCCeeEEeeeEEEEEEECCcCCCCCEEEE
Confidence 4568999999996532 125699999999987 4677999999997642111111
Q ss_pred cCCceEe------ceE-------------------------------------------EEEEEecCcCCCCCEEEECCC
Q 011767 285 KGSGVVD------GVK-------------------------------------------EVKVTIPAGVDSGDTIRVPEA 315 (478)
Q Consensus 285 ~G~G~~~------~~k-------------------------------------------~~~V~Ip~G~~~G~~i~l~g~ 315 (478)
.|.|... ++. .++|.||+|+++|++++++|+
T Consensus 230 ~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~~~ri~g~ 309 (371)
T PRK14287 230 SGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGKVKLKIPAGTQTGTSFRLRGK 309 (371)
T ss_pred ccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCCEEEEECCCccCCcEEEEcCC
Confidence 1111100 000 578999999999999999999
Q ss_pred CCCCCCCCCCccEEEEEEEecCCCcccCCCceeecc
Q 011767 316 GNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDS 351 (478)
Q Consensus 316 G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~ 351 (478)
|.+...+...|||||+|+|..++.+.++...|+..+
T Consensus 310 G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~l 345 (371)
T PRK14287 310 GVPNVHGRGQGDQHVQVRVVTPKNLTEKEKELMREF 345 (371)
T ss_pred CccCCCCCCCCCEEEEEEEEcCCCCCHHHHHHHHHH
Confidence 998655556799999999999888777665555443
No 68
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.24 E-value=1.7e-11 Score=127.74 Aligned_cols=119 Identities=28% Similarity=0.601 Sum_probs=84.2
Q ss_pred eeccCCCCCCCccCC-----CcccccCCcccccEEEcCCccccCCCcCCceEEeeecccc--------------cc----
Q 011767 229 FVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMT--------------CK---- 285 (478)
Q Consensus 229 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~--------------C~---- 285 (478)
...|+.|+|+|.... ....+|+.|+|.|.+ +..+|+.|.|.|.+.+..=.. -.
T Consensus 175 ~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~ 250 (391)
T PRK14284 175 IKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRV----ITDPCSVCRGQGRIKDKRSVHVHIPAGVDSGMRLKMEGYGD 250 (391)
T ss_pred CeecCccCCeeEEEEEeceEEEEEECCCCCCCCcc----cCCcCCCCCCcceecceEEEEEEECCCCCCCCEEEEecccc
Confidence 468999999987431 134699999999987 467899999998753210000 00
Q ss_pred -------------------------------------------CC-ceEe---ceEEEEEEecCcCCCCCEEEECCCCCC
Q 011767 286 -------------------------------------------GS-GVVD---GVKEVKVTIPAGVDSGDTIRVPEAGNA 318 (478)
Q Consensus 286 -------------------------------------------G~-G~~~---~~k~~~V~Ip~G~~~G~~i~l~g~G~~ 318 (478)
|. -.+. +...++|.||+|+++|++++|+|+|.+
T Consensus 251 ~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~i~v~Ip~g~~~g~~~~i~g~G~p 330 (391)
T PRK14284 251 AGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTCRLTIPEGIQSGTILKVRGQGFP 330 (391)
T ss_pred CCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcEEEEEECCccCCCeEEEECCCCCC
Confidence 10 0010 012578999999999999999999998
Q ss_pred CCCCCCCccEEEEEEEecCCCcccCCCceeecc
Q 011767 319 GGRGRQHGNLFIKLKVADDPIFSRDGADVYVDS 351 (478)
Q Consensus 319 ~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~ 351 (478)
...+...|||||+|+|..++.+..+..+|+..+
T Consensus 331 ~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~l 363 (391)
T PRK14284 331 NVHGKGRGDLLVRISVETPQNLSEEQKELLRQF 363 (391)
T ss_pred CCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHH
Confidence 755556899999999998877766665555443
No 69
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.23 E-value=1.9e-11 Score=125.97 Aligned_cols=116 Identities=33% Similarity=0.642 Sum_probs=83.4
Q ss_pred eeccCCCCCCCccCC---------CcccccCCcccccEEEcCCccccCCCcCCceEEeeec--------------ccccc
Q 011767 229 FVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDH--------------CMTCK 285 (478)
Q Consensus 229 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~--------------C~~C~ 285 (478)
...|..|+|+|.... ....+|+.|+|.|... ...|+.|.|.|.+.+.. -....
T Consensus 160 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~----~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~ 235 (354)
T TIGR02349 160 PKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKII----KEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVS 235 (354)
T ss_pred CccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceec----CCCCCCCCCCcEecccceEEEEECCCCCCCCEEEEe
Confidence 578999999986432 2246999999999973 56799999999763210 00111
Q ss_pred CCce------------Ee-ce------------------------------------EEEEEEecCcCCCCCEEEECCCC
Q 011767 286 GSGV------------VD-GV------------------------------------KEVKVTIPAGVDSGDTIRVPEAG 316 (478)
Q Consensus 286 G~G~------------~~-~~------------------------------------k~~~V~Ip~G~~~G~~i~l~g~G 316 (478)
|.|. +. .. -.++|.||+|+.+|++++++|+|
T Consensus 236 g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~~~~i~g~G 315 (354)
T TIGR02349 236 GKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGDVKLKIPAGTQSGTVFRLKGKG 315 (354)
T ss_pred cCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCCceEEEEECCcccCCcEEEECCCC
Confidence 1110 00 00 05789999999999999999999
Q ss_pred CCCCCCCCCccEEEEEEEecCCCcccCCCcee
Q 011767 317 NAGGRGRQHGNLFIKLKVADDPIFSRDGADVY 348 (478)
Q Consensus 317 ~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~ 348 (478)
++...+..+|||||+|+|..++.+..+..+++
T Consensus 316 ~p~~~~~~~GDL~i~~~v~~P~~l~~~~~~~l 347 (354)
T TIGR02349 316 VPRLRGNGRGDLLVTVKVETPKNLSKEQKELL 347 (354)
T ss_pred cCCCCCCCCCCEEEEEEEECCCCCCHHHHHHH
Confidence 98765557899999999998887777665544
No 70
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.23 E-value=5.4e-11 Score=123.15 Aligned_cols=113 Identities=29% Similarity=0.625 Sum_probs=80.6
Q ss_pred ceeccCCCCCCCccCC-----CcccccCCcccccEEEcCCccccCCCcCCceEEeeecccc--------------ccCC-
Q 011767 228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMT--------------CKGS- 287 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~--------------C~G~- 287 (478)
....|+.|+|+|.... ....+|+.|+|.|..+ ..+|..|.|.|.+.+..=.. -.|.
T Consensus 161 ~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~----~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G 236 (372)
T PRK14300 161 TVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQII----KNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTGEG 236 (372)
T ss_pred CCccCCCccCeEEEEEeeceEEEEEeCCCCCccceEe----CCCCCCCCCceEEEeeEEEEEEECCCCCCCcEEEEeccc
Confidence 3468999999997532 1356899999999884 57899999999863211000 1111
Q ss_pred ---------c--eEe--------------------------------------ceEEEEEEecCcCCCCCEEEECCCCCC
Q 011767 288 ---------G--VVD--------------------------------------GVKEVKVTIPAGVDSGDTIRVPEAGNA 318 (478)
Q Consensus 288 ---------G--~~~--------------------------------------~~k~~~V~Ip~G~~~G~~i~l~g~G~~ 318 (478)
| ++. ..+.++|.||+|+++|++++++|+|.+
T Consensus 237 ~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri~g~G~p 316 (372)
T PRK14300 237 EAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRLRSKGMS 316 (372)
T ss_pred cCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEEEEECCccCCCcEEEECCCCCC
Confidence 1 000 001689999999999999999999998
Q ss_pred CCCCCCCccEEEEEEEecCCCcccCC
Q 011767 319 GGRGRQHGNLFIKLKVADDPIFSRDG 344 (478)
Q Consensus 319 ~~~g~~~GDL~v~i~v~~h~~f~R~G 344 (478)
...+..+|||||+|+|..+..+.-+.
T Consensus 317 ~~~~~~~GDL~V~~~v~~P~~ls~~q 342 (372)
T PRK14300 317 KMRSTIRGDMLTHIHVEVPKNLSKRQ 342 (372)
T ss_pred CCCCCCCCCEEEEEEEECCCCCCHHH
Confidence 65556789999999999876554333
No 71
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.21 E-value=6e-11 Score=123.02 Aligned_cols=106 Identities=30% Similarity=0.584 Sum_probs=75.7
Q ss_pred ceeccCCCCCCCccCC---------CcccccCCcccccEEEcCCccccCCCcCCceEEeeecc--------------ccc
Q 011767 228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHC--------------MTC 284 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C--------------~~C 284 (478)
....|+.|+|+|.... ....+|+.|+|.|.+. ..+|+.|.|.|.+.+..= ..-
T Consensus 155 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~----~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~ 230 (378)
T PRK14278 155 KPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVI----PDPCHECAGDGRVRARREITVKIPAGVGDGMRIRL 230 (378)
T ss_pred CceecCCccCceEEEEEEeccceeEEEEEECCCCCccceee----CCCCCCCCCceeEecceEEEEEECCCCCCCcEEEE
Confidence 3468999999997432 1256899999999973 567999999997632110 001
Q ss_pred cCC----------c--eEe-c-------------------------------------eEEEEEEecCcCCCCCEEEECC
Q 011767 285 KGS----------G--VVD-G-------------------------------------VKEVKVTIPAGVDSGDTIRVPE 314 (478)
Q Consensus 285 ~G~----------G--~~~-~-------------------------------------~k~~~V~Ip~G~~~G~~i~l~g 314 (478)
.|. | ++. . ...++|.||+|+++|++++++|
T Consensus 231 ~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld~~~i~v~ip~g~~~g~~lrl~g 310 (378)
T PRK14278 231 AAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPPGTQPGSVITLRG 310 (378)
T ss_pred ccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCCCCeEEEEeCCCcCCCcEEEECC
Confidence 111 1 000 0 0167899999999999999999
Q ss_pred CCCCCCCCCCCccEEEEEEEecC
Q 011767 315 AGNAGGRGRQHGNLFIKLKVADD 337 (478)
Q Consensus 315 ~G~~~~~g~~~GDL~v~i~v~~h 337 (478)
+|.+...+...|||||+|+|.-.
T Consensus 311 ~G~p~~~~~~~GDL~V~~~V~~P 333 (378)
T PRK14278 311 RGMPHLRSGGRGDLHAHVEVVVP 333 (378)
T ss_pred CCCCCCCCCCCCCEEEEEEEEcC
Confidence 99986545568999999999843
No 72
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.20 E-value=4.4e-11 Score=123.61 Aligned_cols=115 Identities=23% Similarity=0.514 Sum_probs=81.2
Q ss_pred ceeccCCCCCCCccCC-----CcccccCCcccccEEEcCCccccCCCcCCceEEeeecccccc--------------CC-
Q 011767 228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCK--------------GS- 287 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~C~--------------G~- 287 (478)
....|+.|+|+|.... ....+|+.|+|.|.. +...|..|.|.|.+.+..=.+.. |.
T Consensus 155 ~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~i~l~g~G 230 (369)
T PRK14288 155 ALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKI----IKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKG 230 (369)
T ss_pred CCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceE----ccccCccCCCcceEEEEEEEEEecCCCCCCCCEEEEccCc
Confidence 4578999999996431 224589999999997 36779999999976431111111 11
Q ss_pred --------c--eEe--ce------------------------------------EEEEEEecCcCCCCCEEEECCCCCCC
Q 011767 288 --------G--VVD--GV------------------------------------KEVKVTIPAGVDSGDTIRVPEAGNAG 319 (478)
Q Consensus 288 --------G--~~~--~~------------------------------------k~~~V~Ip~G~~~G~~i~l~g~G~~~ 319 (478)
| ++. .. +.++|.||+|+++|++++++|+|.+.
T Consensus 231 ~~~~~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~i~g~G~p~ 310 (369)
T PRK14288 231 NEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFAFRNEGVKH 310 (369)
T ss_pred cCCCCCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEEEcCCCCCC
Confidence 1 000 00 05899999999999999999999986
Q ss_pred CCCCCCccEEEEEEEecCCCcccCCCc
Q 011767 320 GRGRQHGNLFIKLKVADDPIFSRDGAD 346 (478)
Q Consensus 320 ~~g~~~GDL~v~i~v~~h~~f~R~G~D 346 (478)
..+...|||||+|+|+-++.+..+...
T Consensus 311 ~~~~~~GDL~v~~~v~~P~~ls~~q~~ 337 (369)
T PRK14288 311 PESSYRGSLIVELQVIYPKSLNKEQQE 337 (369)
T ss_pred CCCCCCCCEEEEEEEECCCCCCHHHHH
Confidence 544446999999999988766554433
No 73
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.18 E-value=4.2e-11 Score=124.27 Aligned_cols=107 Identities=29% Similarity=0.633 Sum_probs=76.8
Q ss_pred eeccCCCCCCCccCC---------CcccccCCcccccEEEcCCccccCCCcCCceEEeeeccccccCC-ceEeceE----
Q 011767 229 FVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK---- 294 (478)
Q Consensus 229 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~C~G~-G~~~~~k---- 294 (478)
...|+.|+|+|.... ....+|+.|+|.|.+ +..+|..|.|.|.+.+..-...... |+..+.+
T Consensus 163 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~ 238 (380)
T PRK14276 163 PVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKE----IKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQIRLQ 238 (380)
T ss_pred CccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCcc----ccCCCCCCCCceEEEEEEEEEEEeCCCccCCcEEEEe
Confidence 468999999997532 125689999999987 4678999999997643211111111 1110000
Q ss_pred ----------------------------------------------------------EEEEEecCcCCCCCEEEECCCC
Q 011767 295 ----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAG 316 (478)
Q Consensus 295 ----------------------------------------------------------~~~V~Ip~G~~~G~~i~l~g~G 316 (478)
.++|.||+|+++|++++++|+|
T Consensus 239 G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tldg~i~v~ip~g~~~g~~~~i~g~G 318 (380)
T PRK14276 239 GQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGDVELKIPAGTQTGKKFRLRGKG 318 (380)
T ss_pred ccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCCCcEEEEECCCCCCCCEEEECCCC
Confidence 5789999999999999999999
Q ss_pred CCCCCCCCCccEEEEEEEecCCC
Q 011767 317 NAGGRGRQHGNLFIKLKVADDPI 339 (478)
Q Consensus 317 ~~~~~g~~~GDL~v~i~v~~h~~ 339 (478)
.+...+..+|||||+|+|.-...
T Consensus 319 ~p~~~~~~~GDL~V~~~v~~P~~ 341 (380)
T PRK14276 319 APKLRGGGNGDQHVTVNIVTPTK 341 (380)
T ss_pred cCCCCCCCCCCEEEEEEEECCCC
Confidence 98755556799999999985443
No 74
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.17 E-value=6.3e-11 Score=122.82 Aligned_cols=109 Identities=28% Similarity=0.621 Sum_probs=77.1
Q ss_pred ceeccCCCCCCCccCC---------CcccccCCcccccEEEcCCccccCCCcCCceEEeeecc--------------ccc
Q 011767 228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHC--------------MTC 284 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C--------------~~C 284 (478)
....|+.|+|+|.... ....+|+.|+|.|.. +..+|+.|.|.|.+.+..= ..-
T Consensus 159 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~i~l 234 (376)
T PRK14280 159 SKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQE----IKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRV 234 (376)
T ss_pred CCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCce----ecCCCCCCCCceEEEEEEEEEEEeCCCCcCCcEEEE
Confidence 4568999999996431 135699999999987 3677999999997642110 000
Q ss_pred cCC----------c--eEe-ceE------------------------------------EEEEEecCcCCCCCEEEECCC
Q 011767 285 KGS----------G--VVD-GVK------------------------------------EVKVTIPAGVDSGDTIRVPEA 315 (478)
Q Consensus 285 ~G~----------G--~~~-~~k------------------------------------~~~V~Ip~G~~~G~~i~l~g~ 315 (478)
.|. | ++. ..+ .++|.||+|+.+|++++++|+
T Consensus 235 ~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip~g~~~g~~~~i~g~ 314 (376)
T PRK14280 235 SGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGKVKLKIPAGTQTGTQFRLKGK 314 (376)
T ss_pred cccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCceEEEEECCCCCCCcEEEEcCC
Confidence 111 1 110 000 578999999999999999999
Q ss_pred CCCCCCCCCCccEEEEEEEecCCCc
Q 011767 316 GNAGGRGRQHGNLFIKLKVADDPIF 340 (478)
Q Consensus 316 G~~~~~g~~~GDL~v~i~v~~h~~f 340 (478)
|.+...+...|||||+|+|......
T Consensus 315 G~p~~~~~~~GDL~v~~~v~~P~~L 339 (376)
T PRK14280 315 GVPNVRGYGQGDQYVVVRVVTPTKL 339 (376)
T ss_pred CCCCCCCCCCCCEEEEEEEECCCCC
Confidence 9986545567999999999855433
No 75
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.17 E-value=2.6e-11 Score=119.70 Aligned_cols=59 Identities=39% Similarity=0.593 Sum_probs=52.2
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--C-----chHHHHHHHHHHHHHhhhc
Q 011767 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN--N-----PSAKRKFQEIRDAYETLRD 137 (478)
Q Consensus 79 ~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~--~-----~~a~~~f~~i~~Ay~vL~d 137 (478)
....++|+||||++++|.+|||+|||+|+++||||+..+ . +.|+++|++|++||++|+.
T Consensus 197 ~~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 197 PTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred CcHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 345799999999999999999999999999999999643 1 2478999999999999985
No 76
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.17 E-value=1.1e-10 Score=121.89 Aligned_cols=107 Identities=35% Similarity=0.625 Sum_probs=76.5
Q ss_pred ceeccCCCCCCCccCCC---------cccccCCcccccEEEcCCccccCCCcCCceEEeeecc--------------ccc
Q 011767 228 AFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHC--------------MTC 284 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C--------------~~C 284 (478)
....|+.|+|+|..... ...+|+.|+|.|.++ ...|+.|.|.|.+.+..- ...
T Consensus 178 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~----~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~ 253 (397)
T PRK14281 178 ATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVV----KDRCPACYGEGIKQGEVTVKVTVPAGVQDGNYLTL 253 (397)
T ss_pred CCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeee----CCCCCCCCCCccEecceEEEEecCCCCCCCCEEEE
Confidence 45689999999975321 256899999999873 568999999998643111 111
Q ss_pred cCCce------------Ee-ceE------------------------------------EEEEEecCcCCCCCEEEECCC
Q 011767 285 KGSGV------------VD-GVK------------------------------------EVKVTIPAGVDSGDTIRVPEA 315 (478)
Q Consensus 285 ~G~G~------------~~-~~k------------------------------------~~~V~Ip~G~~~G~~i~l~g~ 315 (478)
.|.|. +. ..+ .++|.||+|+++|++++++|+
T Consensus 254 ~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip~g~~~G~~~ri~g~ 333 (397)
T PRK14281 254 RGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGAVKLTIPAGTQPETMLRIPGK 333 (397)
T ss_pred ecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCccEEEEeCCccCCCcEEEEcCC
Confidence 11111 00 000 578999999999999999999
Q ss_pred CCCCCCCCCCccEEEEEEEecCC
Q 011767 316 GNAGGRGRQHGNLFIKLKVADDP 338 (478)
Q Consensus 316 G~~~~~g~~~GDL~v~i~v~~h~ 338 (478)
|.+...+...|||||+|+|.-..
T Consensus 334 G~P~~~~~~~GDL~V~~~V~~P~ 356 (397)
T PRK14281 334 GIGHLRGSGRGDQYVRVNVFVPK 356 (397)
T ss_pred CCCCCCCCCCCCEEEEEEEEcCC
Confidence 99865555679999999998443
No 77
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.17 E-value=6.1e-11 Score=123.47 Aligned_cols=107 Identities=31% Similarity=0.613 Sum_probs=76.7
Q ss_pred ceeccCCCCCCCccCC-----CcccccCCcccccEEEcCCccccCCCcCCceEEeeeccc--------------cccCC-
Q 011767 228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCM--------------TCKGS- 287 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~--------------~C~G~- 287 (478)
....|+.|+|+|.... ....+|+.|+|+|.++ ...|..|.|.|.+.+..=. .-.|.
T Consensus 189 ~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~i----~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G 264 (392)
T PRK14279 189 SPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSII----EDPCEECKGTGVTTRTRTINVRIPPGVEDGQRIRLAGQG 264 (392)
T ss_pred CCCCCCCCcceEEEEEEecceEEEEecCCCCceeEEe----CCcCCCCCCCeEEEEeeeeEEEeCCCCCCCcEEEEeCCc
Confidence 4578999999997532 1357999999999983 6789999999976431110 01111
Q ss_pred ---------c--eEe-ce------------------------------------EEEEEEecCcCCCCCEEEECCCCCCC
Q 011767 288 ---------G--VVD-GV------------------------------------KEVKVTIPAGVDSGDTIRVPEAGNAG 319 (478)
Q Consensus 288 ---------G--~~~-~~------------------------------------k~~~V~Ip~G~~~G~~i~l~g~G~~~ 319 (478)
| ++. .. ..++|.||+|+++|++++++|+|++.
T Consensus 265 ~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~i~v~Ip~g~~~g~~iri~g~G~p~ 344 (392)
T PRK14279 265 EAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPVGVKVPAGTADGRILRVRGRGVPK 344 (392)
T ss_pred cCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCceEEEEECCCCCCCCEEEECCCCCCC
Confidence 1 000 00 05789999999999999999999986
Q ss_pred CCCCCCccEEEEEEEecCCC
Q 011767 320 GRGRQHGNLFIKLKVADDPI 339 (478)
Q Consensus 320 ~~g~~~GDL~v~i~v~~h~~ 339 (478)
. +...|||||+|+|.-...
T Consensus 345 ~-~~~~GDL~I~~~v~~P~~ 363 (392)
T PRK14279 345 R-SGGAGDLLVTVKVAVPPN 363 (392)
T ss_pred C-CCCCCCEEEEEEEECCCC
Confidence 3 456899999999985543
No 78
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.16 E-value=6.6e-11 Score=122.43 Aligned_cols=113 Identities=28% Similarity=0.490 Sum_probs=79.4
Q ss_pred eeccCCCCCCCccCC-----CcccccCCcccccEEEcCCccccCCCcCCceEEeeec--------------cccccCC--
Q 011767 229 FVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDH--------------CMTCKGS-- 287 (478)
Q Consensus 229 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~--------------C~~C~G~-- 287 (478)
...|+.|+|+|.... ....+|+.|+|+|.++ ...|+.|.|.|.+.+.. -....|.
T Consensus 167 ~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~----~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~ 242 (372)
T PRK14286 167 PTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVI----SNPCKTCGGQGLQEKRRTINIKIPPGVETGSRLKVSGEGE 242 (372)
T ss_pred CccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEe----cccCCCCCCCcEEecceEEEEEECCCCCCCCEEEECCccc
Confidence 468999999996422 2356899999999884 56899999999864210 0111111
Q ss_pred --------c--eEe-c-------------------------------------eEEEEEEecCcCCCCCEEEECCCCCCC
Q 011767 288 --------G--VVD-G-------------------------------------VKEVKVTIPAGVDSGDTIRVPEAGNAG 319 (478)
Q Consensus 288 --------G--~~~-~-------------------------------------~k~~~V~Ip~G~~~G~~i~l~g~G~~~ 319 (478)
| ++. . .+.++|.||+|+++|++++++|+|.+.
T Consensus 243 ~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i~v~ip~g~~~g~~~ri~G~G~P~ 322 (372)
T PRK14286 243 AGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKAKMKIPEGTESGQVFRLKGHGMPY 322 (372)
T ss_pred cCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEEEEEeCCccCCCcEEEECCCCCCC
Confidence 1 110 0 015889999999999999999999986
Q ss_pred CCCCCCccEEEEEEEecCCCcccCCC
Q 011767 320 GRGRQHGNLFIKLKVADDPIFSRDGA 345 (478)
Q Consensus 320 ~~g~~~GDL~v~i~v~~h~~f~R~G~ 345 (478)
..+...|||||+|+|.-+..+..+..
T Consensus 323 ~~~~~~GDL~V~~~V~~P~~Ls~~qk 348 (372)
T PRK14286 323 LGAYGKGDQHVIVKIEIPKKITRRQR 348 (372)
T ss_pred CCCCCCCcEEEEEEEECCCCCCHHHH
Confidence 55456799999999986554444333
No 79
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.16 E-value=6.5e-11 Score=122.68 Aligned_cols=120 Identities=26% Similarity=0.456 Sum_probs=87.0
Q ss_pred ceeccCCCCCCCccCC---------CcccccCCcccccEEEcCCccccCCCcCCceEEeeecc--------------ccc
Q 011767 228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHC--------------MTC 284 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C--------------~~C 284 (478)
....|+.|+|+|.... ....+|+.|+|.|.. +...|..|.|.|.+.+..= ..-
T Consensus 159 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l 234 (374)
T PRK14293 159 GPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQV----IEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRV 234 (374)
T ss_pred CCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeE----eccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEE
Confidence 3467999999997431 124689999999997 3568999999997532110 111
Q ss_pred cCCce------------Ee-ceE------------------------------------EEEEEecCcCCCCCEEEECCC
Q 011767 285 KGSGV------------VD-GVK------------------------------------EVKVTIPAGVDSGDTIRVPEA 315 (478)
Q Consensus 285 ~G~G~------------~~-~~k------------------------------------~~~V~Ip~G~~~G~~i~l~g~ 315 (478)
.|.|. +. ..+ .++|.||+|+.+|++++++|+
T Consensus 235 ~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~~~i~ip~~~~~g~~~ri~g~ 314 (374)
T PRK14293 235 SGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVELTIPAGTQPNTVLTLENK 314 (374)
T ss_pred ccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCCEEEEeCCCCCCCCEEEECCC
Confidence 11111 00 000 568999999999999999999
Q ss_pred CCCCCCC-CCCccEEEEEEEecCCCcccCCCceeecc
Q 011767 316 GNAGGRG-RQHGNLFIKLKVADDPIFSRDGADVYVDS 351 (478)
Q Consensus 316 G~~~~~g-~~~GDL~v~i~v~~h~~f~R~G~DL~~~~ 351 (478)
|.+...+ ...|||||+|+|..++.+.+++.+|+..+
T Consensus 315 G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~l 351 (374)
T PRK14293 315 GVPRLGNPVARGDHLITVKVKIPTRISDEERELLEKL 351 (374)
T ss_pred CCCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 9986543 24799999999999988999888887665
No 80
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.15 E-value=1.5e-10 Score=120.31 Aligned_cols=105 Identities=30% Similarity=0.572 Sum_probs=76.0
Q ss_pred eeccCCCCCCCccCC---------CcccccCCcccccEEEcCCccccCCCcCCceEEeeeccccccCC-ceEeceE----
Q 011767 229 FVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK---- 294 (478)
Q Consensus 229 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~C~G~-G~~~~~k---- 294 (478)
...|+.|+|+|.... ....+|+.|+|.|.+ +...|..|.|.|.+.+..-...... |+..+++
T Consensus 165 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~I~l~ 240 (380)
T PRK14297 165 PKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKV----IEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPLR 240 (380)
T ss_pred CccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceE----cCCCCCCCCCCeEEEeEeEEEEEeCCCCCCCcEEEEe
Confidence 568999999996531 235799999999987 3678999999996533211111111 1111000
Q ss_pred ----------------------------------------------------------EEEEEecCcCCCCCEEEECCCC
Q 011767 295 ----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAG 316 (478)
Q Consensus 295 ----------------------------------------------------------~~~V~Ip~G~~~G~~i~l~g~G 316 (478)
.++|.||+|+++|++++++|+|
T Consensus 241 g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~~~v~ip~g~~~g~~~ri~g~G 320 (380)
T PRK14297 241 GQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGEVKYEVPAGTQPGTVFRLKGKG 320 (380)
T ss_pred cCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCCcEEEEECCCcCCCCEEEEcCCC
Confidence 5789999999999999999999
Q ss_pred CCCCCCCCCccEEEEEEEecC
Q 011767 317 NAGGRGRQHGNLFIKLKVADD 337 (478)
Q Consensus 317 ~~~~~g~~~GDL~v~i~v~~h 337 (478)
.+...+...|||||+|+|.=.
T Consensus 321 ~p~~~~~~~GDL~v~~~v~~P 341 (380)
T PRK14297 321 VPRVNSTGRGNQYVTVIVDIP 341 (380)
T ss_pred cCCCCCCCCCcEEEEEEEEcC
Confidence 986555567999999999843
No 81
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.15 E-value=9.5e-11 Score=121.41 Aligned_cols=129 Identities=24% Similarity=0.502 Sum_probs=88.2
Q ss_pred ccCccccccccceeccCCCCCCCccCCC---------cccccCCcccccEEEcCCccccCCCcCCceEEeeec-------
Q 011767 217 AKGCTKHVSFDAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDH------- 280 (478)
Q Consensus 217 ~~G~~k~v~~~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~------- 280 (478)
+.|............|..|+|+|..... ...+|+.|+|.|.. +...|..|.|.|.+.+..
T Consensus 145 C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~~~V~Ip 220 (371)
T PRK14292 145 CHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQI----ITDPCTVCRGRGRTLKAETVKVKLP 220 (371)
T ss_pred CcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCccccee----cCCCCCCCCCceEEeecceEEEEEC
Confidence 3443333333346789999999975421 24689999999987 467899999999764211
Q ss_pred -------cccccCCce----------Ee-ceE------------------------------------EEEEEecCcCCC
Q 011767 281 -------CMTCKGSGV----------VD-GVK------------------------------------EVKVTIPAGVDS 306 (478)
Q Consensus 281 -------C~~C~G~G~----------~~-~~k------------------------------------~~~V~Ip~G~~~ 306 (478)
-....|.|. +. ..+ ...|.||+|+++
T Consensus 221 ~G~~~G~~i~~~G~G~~~~~~~GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~~~v~ip~g~~~ 300 (371)
T PRK14292 221 RGIDEGYRIRVAGMGNEGPGGNGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQVIEVKPGTQH 300 (371)
T ss_pred CCCCCCcEEEEecCcCCCCCCCCCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCCEEEecCCCcCC
Confidence 011222211 10 000 347999999999
Q ss_pred CCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceee
Q 011767 307 GDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYV 349 (478)
Q Consensus 307 G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~ 349 (478)
|++++++|+|.+...+..+|||||+|+|+.++.+..+...|+-
T Consensus 301 g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~ 343 (371)
T PRK14292 301 GDLHRLRGQGMPRLQGAGTGDLIVEYEIAVPKQLSPEAREALE 343 (371)
T ss_pred CcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHH
Confidence 9999999999987656668999999999988776655544443
No 82
>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation. DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.
Probab=99.14 E-value=2.6e-11 Score=94.19 Aligned_cols=57 Identities=49% Similarity=1.036 Sum_probs=44.9
Q ss_pred cCCCCCCCccCCCcccccCCcccccEEEcC--------CccccCCCcCCceEEe-eeccccccCCc
Q 011767 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRII-KDHCMTCKGSG 288 (478)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~i-~~~C~~C~G~G 288 (478)
|+.|+|+|........+|+.|+|+|+++.. .+..+|+.|+|+|++| +++|+.|+|.|
T Consensus 1 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i~~~~C~~C~G~g 66 (66)
T PF00684_consen 1 CPKCNGTGAKPGKKPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKIIEKDPCKTCKGSG 66 (66)
T ss_dssp -CCCTTTSB-STTT-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE-TSSB-SSSTTSS
T ss_pred CCcCCCcccCCCCCCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEECCCCCCCCCCcC
Confidence 899999999988999999999999997642 2488999999999999 99999999976
No 83
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.13 E-value=1.8e-10 Score=120.00 Aligned_cols=125 Identities=23% Similarity=0.493 Sum_probs=84.2
Q ss_pred EEeeeehhhccCcccccc--ccceeccCCCCCCCccCCC---------cccccCCcccccEEEcCCccccCCCcCCceEE
Q 011767 208 ELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRI 276 (478)
Q Consensus 208 ~l~ltlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~ 276 (478)
.+.++-...+..|...-. -.....|+.|+|+|..... ....|+.|+|.|.. +...|..|+|.|.+
T Consensus 148 ~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v 223 (386)
T PRK14289 148 KFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKI----IKKKCKKCGGEGIV 223 (386)
T ss_pred EEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccc----cCcCCCCCCCCcEE
Confidence 344444444444433322 2345789999999976422 25689999999987 35789999999976
Q ss_pred eeec--------------cccccCCceEe------ceE------------------------------------------
Q 011767 277 IKDH--------------CMTCKGSGVVD------GVK------------------------------------------ 294 (478)
Q Consensus 277 i~~~--------------C~~C~G~G~~~------~~k------------------------------------------ 294 (478)
.+.. -..-.|.|... +..
T Consensus 224 ~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ld 303 (386)
T PRK14289 224 YGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTID 303 (386)
T ss_pred eeeEEEEEEeCCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCC
Confidence 3211 01111111100 000
Q ss_pred -EEEEEecCcCCCCCEEEECCCCCCCCCCCCCccEEEEEEEec
Q 011767 295 -EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVAD 336 (478)
Q Consensus 295 -~~~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~ 336 (478)
.++|.||+|+++|++++++|+|.+...+...|||||+|+|+=
T Consensus 304 g~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~ 346 (386)
T PRK14289 304 GKAKVKIEAGTQPGKVLRLRNKGLPSVNGYGTGDLLVNVSVYI 346 (386)
T ss_pred ceEEEEECCccCCCcEEEECCCCcCCCCCCCCCcEEEEEEEEe
Confidence 678999999999999999999998655567899999999983
No 84
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.13 E-value=2.4e-10 Score=118.96 Aligned_cols=106 Identities=33% Similarity=0.664 Sum_probs=75.6
Q ss_pred ceeccCCCCCCCccCC---------CcccccCCcccccEEEcCCccccCCCcCCceEEeeeccc--------------cc
Q 011767 228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCM--------------TC 284 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~--------------~C 284 (478)
....|..|+|+|.... ....+|+.|+|.|.+ +...|..|.|.|.+.+..-. .-
T Consensus 171 ~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~ 246 (386)
T PRK14277 171 KPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKI----ITDPCNKCGGTGRIRRRRKIKVNIPAGIDDGQMITL 246 (386)
T ss_pred CCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceee----ccCCCCCCCCCcEEeeeeEEEEecCCCccCCcEEEE
Confidence 3568999999996532 124699999999998 35789999999986431111 11
Q ss_pred cCCceEe------ceE-------------------------------------------EEEEEecCcCCCCCEEEECCC
Q 011767 285 KGSGVVD------GVK-------------------------------------------EVKVTIPAGVDSGDTIRVPEA 315 (478)
Q Consensus 285 ~G~G~~~------~~k-------------------------------------------~~~V~Ip~G~~~G~~i~l~g~ 315 (478)
.|.|... +.. .++|.||+|+++|++++++|+
T Consensus 247 ~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~ri~g~ 326 (386)
T PRK14277 247 RGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGKVKFTIPEGTQTGTKFRLRGK 326 (386)
T ss_pred ccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCCEEEEECCCCCCCCEEEECCC
Confidence 1211100 000 468899999999999999999
Q ss_pred CCCCCCCCCCccEEEEEEEecC
Q 011767 316 GNAGGRGRQHGNLFIKLKVADD 337 (478)
Q Consensus 316 G~~~~~g~~~GDL~v~i~v~~h 337 (478)
|.+...+...|||||+|+|.-.
T Consensus 327 G~p~~~~~~~GDL~v~~~V~~P 348 (386)
T PRK14277 327 GIPHLRGRGRGDQIVKVYIEVP 348 (386)
T ss_pred CCCCCCCCCCCCEEEEEEEEeC
Confidence 9986544567999999999733
No 85
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.12 E-value=2.6e-10 Score=118.44 Aligned_cols=104 Identities=33% Similarity=0.622 Sum_probs=74.7
Q ss_pred ceeccCCCCCCCccCC-----CcccccCCcccccEEEcCCccccCCCcCCceEEeeecc--------------ccccCCc
Q 011767 228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHC--------------MTCKGSG 288 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C--------------~~C~G~G 288 (478)
....|+.|+|+|.... ....+|+.|+|.|.+ ...|..|+|.|.+.+..= ....|.|
T Consensus 172 ~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~-----~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G 246 (382)
T PRK14291 172 GEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGVL-----REPCSKCNGRGLVIKKETIKVRIPPGVDNGSKLRVPGKG 246 (382)
T ss_pred CCccCCCCCCceEEEEecceEEEEecCCCCCCceEE-----ccCCCCCCCCceEEeeeEEEEEeCCCCCCCCEEEEecCc
Confidence 4568999999996532 235799999999953 568999999997632111 1111111
Q ss_pred e------------Ee-c-------------------------------------eEEEEEEecCcCCCCCEEEECCCCCC
Q 011767 289 V------------VD-G-------------------------------------VKEVKVTIPAGVDSGDTIRVPEAGNA 318 (478)
Q Consensus 289 ~------------~~-~-------------------------------------~k~~~V~Ip~G~~~G~~i~l~g~G~~ 318 (478)
- +. . .+.++|.||+|+++|++++++|+|++
T Consensus 247 ~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~l~V~Ip~g~~~G~~i~i~G~G~p 326 (382)
T PRK14291 247 HAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPGTKEGDKIRVPGKGMP 326 (382)
T ss_pred CCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCEEEEEECCccCCCCEEEECCCCCC
Confidence 0 00 0 00589999999999999999999998
Q ss_pred CCCCCCCccEEEEEEEec
Q 011767 319 GGRGRQHGNLFIKLKVAD 336 (478)
Q Consensus 319 ~~~g~~~GDL~v~i~v~~ 336 (478)
...+...|||||+|+|.-
T Consensus 327 ~~~~~~~GDL~V~~~V~~ 344 (382)
T PRK14291 327 RLKGSGYGDLVVRVHIDV 344 (382)
T ss_pred CCCCCCCCCEEEEEEEEe
Confidence 765556899999999983
No 86
>PHA02624 large T antigen; Provisional
Probab=99.12 E-value=4.9e-11 Score=127.30 Aligned_cols=60 Identities=28% Similarity=0.557 Sum_probs=56.0
Q ss_pred CCCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhh
Q 011767 81 KRDPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY 144 (478)
Q Consensus 81 ~~~~Y~vLgv~~~a--s~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~y 144 (478)
..++|++|||+++| +.++||+|||++|++||||++++ +++|++|++||++|+|+.+|..|
T Consensus 10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd----eekfk~Ln~AYevL~d~~k~~r~ 71 (647)
T PHA02624 10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD----EEKMKRLNSLYKKLQEGVKSARQ 71 (647)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc----HHHHHHHHHHHHHHhcHHHhhhc
Confidence 35899999999999 99999999999999999999743 68999999999999999999998
No 87
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.11 E-value=2.9e-10 Score=118.33 Aligned_cols=106 Identities=27% Similarity=0.562 Sum_probs=75.5
Q ss_pred ceeccCCCCCCCccCC-----CcccccCCcccccEEEcCCccccCCCcCCceEEeeecc--------------ccccCC-
Q 011767 228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHC--------------MTCKGS- 287 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C--------------~~C~G~- 287 (478)
....|+.|+|+|.... ....+|+.|+|.|.++ ..+|..|.|.|.+.+..= ..-.|.
T Consensus 182 ~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~----~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~g~G 257 (389)
T PRK14295 182 TPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIA----DDPCLVCKGSGRAKSSRTMQVRIPAGVSDGQRIRLRGKG 257 (389)
T ss_pred CCcCCCCCCCEeEEEEEecceEEEEecCCCcceeEEe----ccCCCCCCCCceEeeeeEEEEEeCCCCCCCCEEEEcccc
Confidence 3478999999986432 2356999999999973 678999999997642110 011111
Q ss_pred ---------c--eEe-c-------------------------------------eEEEEEEecCcCCCCCEEEECCCCCC
Q 011767 288 ---------G--VVD-G-------------------------------------VKEVKVTIPAGVDSGDTIRVPEAGNA 318 (478)
Q Consensus 288 ---------G--~~~-~-------------------------------------~k~~~V~Ip~G~~~G~~i~l~g~G~~ 318 (478)
| ++. . .+.++|.||+|+++|++++++|+|.+
T Consensus 258 ~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~~~v~ip~g~~~g~~iri~G~G~p 337 (389)
T PRK14295 258 APGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPPVTVKLPPGTPNGRVLRVRGKGAV 337 (389)
T ss_pred cCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCEEEEEECCccCCCcEEEECCCCcC
Confidence 1 000 0 00688999999999999999999998
Q ss_pred CCCCCCCccEEEEEEEecCC
Q 011767 319 GGRGRQHGNLFIKLKVADDP 338 (478)
Q Consensus 319 ~~~g~~~GDL~v~i~v~~h~ 338 (478)
.. +...|||||+|+|.-..
T Consensus 338 ~~-~~~~GDL~i~~~v~~P~ 356 (389)
T PRK14295 338 RK-DGTRGDLLVTVEVAVPK 356 (389)
T ss_pred CC-CCCCCCEEEEEEEECCC
Confidence 64 45689999999998443
No 88
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.11 E-value=3.3e-10 Score=117.17 Aligned_cols=107 Identities=22% Similarity=0.567 Sum_probs=74.5
Q ss_pred ceeccCCCCCCCccCCC---------cccccCCcccccEEEcCCccccCCCcCCceEEeeecc--------------ccc
Q 011767 228 AFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHC--------------MTC 284 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C--------------~~C 284 (478)
....|+.|+|+|..... ...+|+.|+|.|.+ +...|+.|.|.|.+.+..= ..-
T Consensus 165 ~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~ 240 (372)
T PRK14296 165 DIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKI----IKNKCKNCKGKGKYLERKKIEVNIPKGIRPNQQIKL 240 (372)
T ss_pred CCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCccee----ecccccCCCCceEEEEEEEEEEEECCCCCCCCEEEE
Confidence 34679999999975422 24699999999998 3678999999997532100 011
Q ss_pred cCC----------c--eE-----------e-c-eE-------------------------EEEEEecCcCCCCCEEEECC
Q 011767 285 KGS----------G--VV-----------D-G-VK-------------------------EVKVTIPAGVDSGDTIRVPE 314 (478)
Q Consensus 285 ~G~----------G--~~-----------~-~-~k-------------------------~~~V~Ip~G~~~G~~i~l~g 314 (478)
.|. | ++ + + .. .++|.||+|+++|++++++|
T Consensus 241 ~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~t~~g~~~ri~G 320 (372)
T PRK14296 241 SQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTLDGDIKYKLPKSINSNELIIINN 320 (372)
T ss_pred eccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCCCCCEEEEECCccCCCcEEEEcC
Confidence 111 1 00 0 0 00 57899999999999999999
Q ss_pred CCCCCC-CCCCCccEEEEEEEecCC
Q 011767 315 AGNAGG-RGRQHGNLFIKLKVADDP 338 (478)
Q Consensus 315 ~G~~~~-~g~~~GDL~v~i~v~~h~ 338 (478)
+|.+.. .+...|||||+|+|.-..
T Consensus 321 kGmP~~~~~~~~GDL~V~~~V~~P~ 345 (372)
T PRK14296 321 KGLYKSINKDKRGDLIIKVNIVVPK 345 (372)
T ss_pred CCCCcCCCCCCcCCEEEEEEEECCC
Confidence 999733 233469999999998443
No 89
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.08 E-value=4.9e-10 Score=116.34 Aligned_cols=105 Identities=34% Similarity=0.668 Sum_probs=75.0
Q ss_pred ceeccCCCCCCCccCC---------CcccccCCcccccEEEcCCccccCCCcCCceEEeeecccccc-------------
Q 011767 228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCK------------- 285 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~C~------------- 285 (478)
....|+.|+|+|.... ....+|+.|+|.|.. +..+|..|.|.|.+.+..-..+.
T Consensus 162 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l 237 (378)
T PRK14283 162 EVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKI----VEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRV 237 (378)
T ss_pred CCccCCCcCCccEEEEEEeccCceEEEEEECCCCCcccee----cCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEE
Confidence 3467999999998532 125699999999987 35789999999976431111111
Q ss_pred -CC----------c--eEe-ceE------------------------------------EEEEEecCcCCCCCEEEECCC
Q 011767 286 -GS----------G--VVD-GVK------------------------------------EVKVTIPAGVDSGDTIRVPEA 315 (478)
Q Consensus 286 -G~----------G--~~~-~~k------------------------------------~~~V~Ip~G~~~G~~i~l~g~ 315 (478)
|. | ++. ..+ .++|.||+|+++|++++++|+
T Consensus 238 ~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~~ri~g~ 317 (378)
T PRK14283 238 SGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVELKIPAGTQSGTTFRLKGH 317 (378)
T ss_pred eccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCceEEEEeCCCCCCCCEEEECCC
Confidence 11 1 000 000 578999999999999999999
Q ss_pred CCCCCCCCCCccEEEEEEEec
Q 011767 316 GNAGGRGRQHGNLFIKLKVAD 336 (478)
Q Consensus 316 G~~~~~g~~~GDL~v~i~v~~ 336 (478)
|.+...+...|||||+|+|.-
T Consensus 318 G~p~~~~~~~GdL~v~~~v~~ 338 (378)
T PRK14283 318 GMPSLRWSGKGNLYVKVKVVV 338 (378)
T ss_pred CCCCCCCCCCCCEEEEEEEEe
Confidence 998654456799999999973
No 90
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.06 E-value=7.3e-10 Score=116.04 Aligned_cols=107 Identities=27% Similarity=0.573 Sum_probs=75.5
Q ss_pred ceeccCCCCCCCccCC---------CcccccCCcccccEEEcCCccccCCCcCCceEEeeeccccccCC-ceEeceE---
Q 011767 228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK--- 294 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~C~G~-G~~~~~k--- 294 (478)
....|+.|+|+|.... ....+|+.|+|.|.++. ...+|..|+|.|.+.+..=...... |+..+.+
T Consensus 165 ~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~--~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~dG~~I~~ 242 (421)
T PTZ00037 165 AFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIP--ESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITF 242 (421)
T ss_pred CCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceecc--ccccCCcCCCcceeeeeeEEEEeeCCCCCCCcEEEE
Confidence 4578999999996321 23569999999998742 2568999999997643211111111 1111100
Q ss_pred -----------------------------------------------------------EEEEEecCc--CCCCCEEEEC
Q 011767 295 -----------------------------------------------------------EVKVTIPAG--VDSGDTIRVP 313 (478)
Q Consensus 295 -----------------------------------------------------------~~~V~Ip~G--~~~G~~i~l~ 313 (478)
.+.|.|||| +++|++++|+
T Consensus 243 ~G~Gd~~~~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g~vt~pg~~~~I~ 322 (421)
T PTZ00037 243 HGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVIN 322 (421)
T ss_pred ecccCCCCCCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCCcccCCCcEEEeC
Confidence 688999999 9999999999
Q ss_pred CCCCCCCCC-CCCccEEEEEEEec
Q 011767 314 EAGNAGGRG-RQHGNLFIKLKVAD 336 (478)
Q Consensus 314 g~G~~~~~g-~~~GDL~v~i~v~~ 336 (478)
|+|.+...+ ...|||||+|+|.-
T Consensus 323 geGmP~~~~~~~rGDL~V~~~V~~ 346 (421)
T PTZ00037 323 NEGMPTYKSPFKKGNLYVTFEVIF 346 (421)
T ss_pred CCCcccCCCCCCCCCEEEEEEEEc
Confidence 999986433 35699999999973
No 91
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.05 E-value=3.2e-10 Score=104.62 Aligned_cols=68 Identities=26% Similarity=0.419 Sum_probs=58.9
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCch-----HHHHHHHHHHHHHhhhcchhhhhhhcccc
Q 011767 82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (478)
Q Consensus 82 ~~~Y~vLgv~~~--as~~eIk~ayr~la~~~HPDk~~~~~~-----a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~ 149 (478)
.|||++||+++. .+..+++++|++|++++|||+..+.++ +.+.-..||+||.+|+||.+|+.|=-...
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L~ 76 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAIIALN 76 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHhc
Confidence 599999999985 889999999999999999999876543 34456799999999999999999977543
No 92
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=98.99 E-value=3e-10 Score=115.08 Aligned_cols=70 Identities=33% Similarity=0.640 Sum_probs=63.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----CchHHHHHHHHHHHHHhhhcchhhhhhhccccC
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN-----NPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSR 150 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~-----~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~ 150 (478)
.-|+|+|||++.+++..+||++||+|..++||||.+. ..+-++++++|++||+.|+|...|..|-.+|..
T Consensus 97 ~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtP 171 (610)
T COG5407 97 GFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTP 171 (610)
T ss_pred CCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCC
Confidence 3599999999999999999999999999999999875 135789999999999999999999999999754
No 93
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=98.95 E-value=1.1e-09 Score=99.66 Aligned_cols=57 Identities=26% Similarity=0.435 Sum_probs=49.1
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCc-----hHHHHHHHHHHHHHhhhcchhhhhhhcccc
Q 011767 93 NASQDEIKKAFHMLAKQYHPDANKNNP-----SAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (478)
Q Consensus 93 ~as~~eIk~ayr~la~~~HPDk~~~~~-----~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~ 149 (478)
+.+..+|+++||+|++++|||+..+.. .+.+.|+.||+||++|+||.+|+.|+-...
T Consensus 2 ~iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l~ 63 (157)
T TIGR00714 2 QLDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSLH 63 (157)
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 357889999999999999999965432 266889999999999999999999998754
No 94
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.82 E-value=4.6e-09 Score=96.19 Aligned_cols=66 Identities=26% Similarity=0.527 Sum_probs=59.5
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-chHHHHHHHHHHHHHhhhcchhhhhhh
Q 011767 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYD 145 (478)
Q Consensus 80 ~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~-~~a~~~f~~i~~Ay~vL~dp~~R~~yD 145 (478)
-.-|+|+||.|.++.+.++||+.||+|++..|||||+++ +.|...|.-|..||..|-|+..|..-+
T Consensus 51 fnLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~~ 117 (250)
T KOG1150|consen 51 FNLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRCL 117 (250)
T ss_pred cccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 456999999999999999999999999999999999988 568999999999999999998555433
No 95
>PRK14299 chaperone protein DnaJ; Provisional
Probab=98.74 E-value=2.6e-08 Score=99.88 Aligned_cols=70 Identities=33% Similarity=0.572 Sum_probs=63.0
Q ss_pred cccCCCceeecccCCHHHHhcCCeEEEecCCC-EEEEEeCCCCCCCcEEEEcCCCccCCCCCCCCCcEEEEEEEeCCCC
Q 011767 340 FSRDGADVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTA 417 (478)
Q Consensus 340 f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG-~~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ 417 (478)
+.|+|.||++++.|||.||++|+++.| +++| .++|+||+|+++|++++++|+|++. |||||+|+|.-+..
T Consensus 125 ~~~~g~dl~~~l~isL~ea~~G~~~~i-~l~g~~~~V~Ip~G~~~G~~ir~~g~G~~~-------GDL~v~i~v~~h~~ 195 (291)
T PRK14299 125 RARKGRDLEAELPLTLEEAYRGGEKVV-EVAGERLSVRIPPGVREGQVIRLAGKGRQG-------GDLYLVVRLLPHPV 195 (291)
T ss_pred CCCCCCCEEEEEEecHHHHhCCCeEEE-eeCCEEEEEecCCCcCCCcEEEECCCCCCC-------CCEEEEEEEcCCCC
Confidence 357899999999999999999999998 6777 5799999999999999999999872 99999999986654
No 96
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.72 E-value=8.4e-09 Score=98.55 Aligned_cols=74 Identities=34% Similarity=0.423 Sum_probs=63.9
Q ss_pred CCCCCCCCCcccccCCCC---CCCHHHHHHHHHHHHHHhCCCCC--CCCchHHHHHHHHHHHHHhhhcchhhhhhhccc
Q 011767 75 GSCYSSKRDPYELLGVPE---NASQDEIKKAFHMLAKQYHPDAN--KNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (478)
Q Consensus 75 ~~~~~~~~~~Y~vLgv~~---~as~~eIk~ayr~la~~~HPDk~--~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~ 148 (478)
....|...|+|.+|||+. .|++.+|.+|.++.+.+||||+. +++....+.|+.|+.||+||+|+.+|.+||...
T Consensus 36 d~k~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~d 114 (379)
T COG5269 36 DFKNWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSND 114 (379)
T ss_pred hhhhhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhccccc
Confidence 345577789999999986 68889999999999999999997 233445789999999999999999999999874
No 97
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=98.55 E-value=1.9e-07 Score=94.42 Aligned_cols=74 Identities=26% Similarity=0.505 Sum_probs=60.9
Q ss_pred cCCCceeecccCCHHHHhcCCeEEE----ecCC--C--------EEEEEeCCCCCCCcEEEEcCCCccCCCCCCCCCcEE
Q 011767 342 RDGADVYVDSNISFTQAILGGKVDV----PTLS--G--------KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQY 407 (478)
Q Consensus 342 R~G~DL~~~~~Isl~eAl~G~~~~i----~tld--G--------~~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~~GdL~ 407 (478)
++|.||++++.|+|.||+.|+..+| ++++ | .++|+||+|+++|++++++|+|+|.... ..+||||
T Consensus 115 ~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~~GDl~ 193 (306)
T PRK10266 115 ARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENG-GPNGDLW 193 (306)
T ss_pred CCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCCCcCCcEEEEecCCcCCCCC-CCCccEE
Confidence 5689999999999999999996554 4444 3 3689999999999999999999996522 2369999
Q ss_pred EEEEEeCCCC
Q 011767 408 VRFRVNFPTA 417 (478)
Q Consensus 408 v~~~V~~P~~ 417 (478)
|+|+|. |..
T Consensus 194 v~i~v~-ph~ 202 (306)
T PRK10266 194 LVIHIA-PHP 202 (306)
T ss_pred EEEEEc-CCC
Confidence 999999 643
No 98
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=98.45 E-value=3.5e-07 Score=73.97 Aligned_cols=44 Identities=30% Similarity=0.626 Sum_probs=34.7
Q ss_pred EEEEEEecCcCCCCCEEEECCCCCCCCCCC-CCccEEEEEEEecC
Q 011767 294 KEVKVTIPAGVDSGDTIRVPEAGNAGGRGR-QHGNLFIKLKVADD 337 (478)
Q Consensus 294 k~~~V~Ip~G~~~G~~i~l~g~G~~~~~g~-~~GDL~v~i~v~~h 337 (478)
+.++|.||+|+++|++++++|+|.+...+. ..|||||+++|.-.
T Consensus 27 ~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P 71 (81)
T PF01556_consen 27 KTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFP 71 (81)
T ss_dssp -EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--
T ss_pred CEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECC
Confidence 467899999999999999999999765554 79999999999833
No 99
>PLN03165 chaperone protein dnaJ-related; Provisional
Probab=98.44 E-value=1.6e-07 Score=79.88 Aligned_cols=56 Identities=39% Similarity=0.907 Sum_probs=46.1
Q ss_pred ceeccCCCCCCCccCCCcccccCCcccccEEEcC-----CccccCCCcCCceEEeeeccccccCCceEec
Q 011767 228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP-----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDG 292 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~-----~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~ 292 (478)
-.+.|..|+|+|. .+|+.|+|+|.+... +...+|+.|+|+|+. .|..|.|.|++..
T Consensus 40 ~~v~C~~C~GsG~------~~C~~C~G~G~v~~~~~g~~q~~~~C~~C~G~Gk~---~C~~C~G~G~~~~ 100 (111)
T PLN03165 40 NTQPCFPCSGTGA------QVCRFCVGSGNVTVELGGGEKEVSKCINCDGAGSL---TCTTCQGSGIQPR 100 (111)
T ss_pred cCCCCCCCCCCCC------cCCCCCcCcCeEEEEeCCcEEEEEECCCCCCccee---eCCCCCCCEEEee
Confidence 4578999999997 389999999987542 237799999999975 4999999997753
No 100
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.27 E-value=9e-07 Score=97.67 Aligned_cols=58 Identities=29% Similarity=0.477 Sum_probs=48.7
Q ss_pred CCCCCCCCcccccCCCCC----CCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhh
Q 011767 76 SCYSSKRDPYELLGVPEN----ASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLR 136 (478)
Q Consensus 76 ~~~~~~~~~Y~vLgv~~~----as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~ 136 (478)
+..++..+.|+||.++-+ -..+.||++|++||.+||||||+ +..++|..||+|||.|+
T Consensus 1275 P~~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNP---EGRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1275 PATMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNP---EGREMFERVNKAYELLS 1336 (2235)
T ss_pred CCccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCc---hHHHHHHHHHHHHHHHH
Confidence 344566789999998752 23478999999999999999984 56899999999999998
No 101
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.25 E-value=2.1e-06 Score=86.32 Aligned_cols=103 Identities=27% Similarity=0.536 Sum_probs=72.7
Q ss_pred ccCCCCCCCccCCC----------cccccCCcccccEEEcCCccccCCCcCCceEEee--------ecc-----------
Q 011767 231 PCDSCHGRGFPADA----------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK--------DHC----------- 281 (478)
Q Consensus 231 ~C~~C~G~G~~~~~----------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~--------~~C----------- 281 (478)
.|..|.|+|..... .+.+|..|+|+|..+ .....|+.|.|++.+-. .+|
T Consensus 145 ~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~--~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~ki~f~g 222 (337)
T KOG0712|consen 145 KCTTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETI--SLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQKITFKG 222 (337)
T ss_pred CCCCCCCCCceeEEEeccccccccceeEeccCCCccccc--cccccCcccccchhhhhhheeeccccCCCcccceeeeee
Confidence 69999999887432 257899999999852 24678999999886521 011
Q ss_pred ------------------------------------------ccccCCceE--eceEEEEEEecCc--CCCCCEEEECCC
Q 011767 282 ------------------------------------------MTCKGSGVV--DGVKEVKVTIPAG--VDSGDTIRVPEA 315 (478)
Q Consensus 282 ------------------------------------------~~C~G~G~~--~~~k~~~V~Ip~G--~~~G~~i~l~g~ 315 (478)
.-|.+.-.. -..+.+.+.++|| +.+|++.++.|+
T Consensus 223 eadea~g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~~~v~~~ 302 (337)
T KOG0712|consen 223 EADEAPGTKPGDVVLLIDQKEHPGFDRRGSDLYRKLTISLVEALCGFQRVWETLDGRLLKLSSKPGEVISPGDTKRVEGE 302 (337)
T ss_pred eeeecCCCcCccEEEEecccccccceecccccceeeecchhhccccceEEEEccCCceEEEecCCCceeChhHEEeecCC
Confidence 011111011 1123788999999 999999999999
Q ss_pred CCCCCCCCCCccEEEEEEEec
Q 011767 316 GNAGGRGRQHGNLFIKLKVAD 336 (478)
Q Consensus 316 G~~~~~g~~~GDL~v~i~v~~ 336 (478)
|++..... .|||||.+.|+=
T Consensus 303 gmp~~~~~-~g~lyi~~~v~f 322 (337)
T KOG0712|consen 303 GMPIFRNP-KGDLYIKFEVKF 322 (337)
T ss_pred CcccccCC-CCcEEEEEEEEc
Confidence 99986544 999999999983
No 102
>TIGR02642 phage_xxxx uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.
Probab=98.12 E-value=2.9e-06 Score=78.82 Aligned_cols=49 Identities=35% Similarity=0.659 Sum_probs=42.7
Q ss_pred cccCCCcCCceEEee--eccccccCCceEeceEEEEEEecCcCCCCCEEEEC
Q 011767 264 TSTCSTCKGLGRIIK--DHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVP 313 (478)
Q Consensus 264 ~~~C~~C~G~G~~i~--~~C~~C~G~G~~~~~k~~~V~Ip~G~~~G~~i~l~ 313 (478)
..+|+.|+|+|++++ ++|+.|+|.|.+..++.+.+.+ .|+.+|++|++.
T Consensus 99 ~~~C~~C~G~G~~i~~~~~C~~C~G~G~v~~~~~~~~k~-~g~~~g~~it~~ 149 (186)
T TIGR02642 99 SCKCPRCRGTGLIQRRQRECDTCAGTGRFRPTVEDLLKS-FGVDSGAAIVLK 149 (186)
T ss_pred CCcCCCCCCeeEEecCCCCCCCCCCccEEeeeEEEEEEe-eeccCCceeeHH
Confidence 456788888888886 6899999999999999999999 999999999875
No 103
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.11 E-value=3.5e-06 Score=79.13 Aligned_cols=57 Identities=37% Similarity=0.675 Sum_probs=50.3
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHH-hhhcc
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYE-TLRDS 138 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~-vL~dp 138 (478)
-..+|.+|||..+|+.+|++.||..||+++|||.... ....+.|.+|.+||. ||+..
T Consensus 46 ~~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~-~adaa~f~qideafrkvlq~~ 103 (342)
T KOG0568|consen 46 IMECFRILGVEEGADADEVREAFHDLAKQVHPDSGSE-EADAARFIQIDEAFRKVLQEK 103 (342)
T ss_pred HHHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCc-cccHHHHHHHHHHHHHHHHHH
Confidence 3589999999999999999999999999999998865 344578999999999 88754
No 104
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=97.73 E-value=0.00011 Score=80.37 Aligned_cols=70 Identities=50% Similarity=0.816 Sum_probs=65.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCC
Q 011767 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS 152 (478)
Q Consensus 82 ~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~ 152 (478)
.|||+||||+++|+.++||+|||+||++||||++++ +.+.++|++|++||++|+||.+|+.||.++..+.
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~-~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~ 71 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA-PDAASIFAEINEANDVLSNPKKRANYDKYGHDGV 71 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHhCCHHHHHHHhhhccccc
Confidence 599999999999999999999999999999999976 7788899999999999999999999999876553
No 105
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]
Probab=97.59 E-value=4.2e-05 Score=80.73 Aligned_cols=60 Identities=32% Similarity=0.747 Sum_probs=34.9
Q ss_pred eccCCCCCCCccCCCcccccCCcccccEEEc-C----------------CccccCCCcCCceEEe-eeccccccCCceE
Q 011767 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTI-P----------------PFTSTCSTCKGLGRII-KDHCMTCKGSGVV 290 (478)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~-~----------------~~~~~C~~C~G~G~~i-~~~C~~C~G~G~~ 290 (478)
..|+.|+|+|.... ....||.|+|+|.+.. . .+..+|+.|.|+|.+. -..|+.|.|.|.+
T Consensus 3 ~~C~~C~g~G~i~v-~~e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~v~~~c~~c~G~gkv 80 (715)
T COG1107 3 KKCPECGGKGKIVV-GEEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVTVYDTCPECGGTGKV 80 (715)
T ss_pred ccccccCCCceEee-eeeecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEEEEeecccCCCceeE
Confidence 35777777665432 2356777777775420 0 1244677777777654 4667777776644
No 106
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.58 E-value=0.00013 Score=60.76 Aligned_cols=59 Identities=27% Similarity=0.389 Sum_probs=48.8
Q ss_pred CCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcc
Q 011767 76 SCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138 (478)
Q Consensus 76 ~~~~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp 138 (478)
.+.+..+.--.||||.+.++.+.||.|+|++....|||+.+. | -.=.+||||+++|...
T Consensus 50 ~~kMsr~EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGS-P---YlAsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 50 EPKMSRREAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGS-P---YLASKINEAKDLLEGT 108 (112)
T ss_pred ccccchHHHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCC-H---HHHHHHHHHHHHHhcc
Confidence 344556677889999999999999999999999999999875 3 2234699999999754
No 107
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=97.53 E-value=8.8e-05 Score=65.95 Aligned_cols=68 Identities=26% Similarity=0.455 Sum_probs=54.1
Q ss_pred CCCCcccccCCC--CCCCHHHHHHHHHHHHHHhCCCCCCCCc-----hHHHHHHHHHHHHHhhhcchhhhhhhcc
Q 011767 80 SKRDPYELLGVP--ENASQDEIKKAFHMLAKQYHPDANKNNP-----SAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (478)
Q Consensus 80 ~~~~~Y~vLgv~--~~as~~eIk~ayr~la~~~HPDk~~~~~-----~a~~~f~~i~~Ay~vL~dp~~R~~yD~~ 147 (478)
...+||.++|.. ....+.-++--|.-..+++|||+..... -|.+...+||+||.+|.||.+|+.|=.-
T Consensus 6 ~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilk 80 (168)
T KOG3192|consen 6 SPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLK 80 (168)
T ss_pred hHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 346899999754 4556666777899999999999954321 3677899999999999999999999764
No 108
>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation. DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.
Probab=97.44 E-value=6.5e-05 Score=58.28 Aligned_cols=44 Identities=32% Similarity=0.778 Sum_probs=32.3
Q ss_pred ceeccCCCCCCCccCCC---------cccccCCcccccEEEcCCccccCCCcCCce
Q 011767 228 AFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLG 274 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G 274 (478)
....|+.|+|+|..... ...+|+.|+|+|.++ ...+|+.|+|.|
T Consensus 14 ~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i---~~~~C~~C~G~g 66 (66)
T PF00684_consen 14 KPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKII---EKDPCKTCKGSG 66 (66)
T ss_dssp T-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE----TSSB-SSSTTSS
T ss_pred CCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEE---CCCCCCCCCCcC
Confidence 45689999999997432 367999999999984 278999999986
No 109
>PLN03165 chaperone protein dnaJ-related; Provisional
Probab=96.56 E-value=0.0015 Score=55.79 Aligned_cols=41 Identities=34% Similarity=0.764 Sum_probs=31.6
Q ss_pred ccCCCCCCCccCC------CcccccCCcccccEEEcCCccccCCCcCCceEEee
Q 011767 231 PCDSCHGRGFPAD------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK 278 (478)
Q Consensus 231 ~C~~C~G~G~~~~------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~ 278 (478)
.|+.|+|+|.... .....|+.|+|+|+. .|..|.|+|.+.+
T Consensus 54 ~C~~C~G~G~v~~~~~g~~q~~~~C~~C~G~Gk~-------~C~~C~G~G~~~~ 100 (111)
T PLN03165 54 VCRFCVGSGNVTVELGGGEKEVSKCINCDGAGSL-------TCTTCQGSGIQPR 100 (111)
T ss_pred CCCCCcCcCeEEEEeCCcEEEEEECCCCCCccee-------eCCCCCCCEEEee
Confidence 7999999987532 125689999999964 3999999998754
No 110
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]
Probab=96.54 E-value=0.0018 Score=68.71 Aligned_cols=57 Identities=37% Similarity=0.842 Sum_probs=42.4
Q ss_pred eeccCCCCCCCccCCCc------------------ccccCCcccccEEEcCCccccCCCcCCceEEee--------e---
Q 011767 229 FVPCDSCHGRGFPADAK------------------TKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK--------D--- 279 (478)
Q Consensus 229 ~~~C~~C~G~G~~~~~~------------------~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~--------~--- 279 (478)
...|+.|+|+|....-. -..|+.|+|.|.+. ...+|+.|+|+|++.. .
T Consensus 18 ~e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~---v~~~c~~c~G~gkv~~c~~cG~~~~~~~ 94 (715)
T COG1107 18 EEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVT---VYDTCPECGGTGKVLTCDICGDIIVPWE 94 (715)
T ss_pred eeecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEE---EEeecccCCCceeEEeeccccceecCcc
Confidence 45799999999863211 35899999999985 4678999999998853 1
Q ss_pred --ccccccCCc
Q 011767 280 --HCMTCKGSG 288 (478)
Q Consensus 280 --~C~~C~G~G 288 (478)
.|+.|.-++
T Consensus 95 ~~lc~~c~~~~ 105 (715)
T COG1107 95 EGLCPECRRKP 105 (715)
T ss_pred cccChhHhhCC
Confidence 377777554
No 111
>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]
Probab=96.37 E-value=0.0036 Score=61.90 Aligned_cols=29 Identities=38% Similarity=0.910 Sum_probs=18.7
Q ss_pred cCCCcCCceEEeeeccccccCCceEeceEEEE
Q 011767 266 TCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVK 297 (478)
Q Consensus 266 ~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~ 297 (478)
.|++|+|.|. .+|.+|+|.|.+..-..+.
T Consensus 247 ~C~tC~grG~---k~C~TC~gtgsll~~t~~v 275 (406)
T KOG2813|consen 247 ECHTCKGRGK---KPCTTCSGTGSLLNYTRIV 275 (406)
T ss_pred cCCcccCCCC---cccccccCccceeeeEEEE
Confidence 5666666664 4788888888665443333
No 112
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.09 E-value=0.0045 Score=57.42 Aligned_cols=69 Identities=32% Similarity=0.524 Sum_probs=54.5
Q ss_pred CcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCCch-----HHHHHHHHHHHHHhhhcchhhhhhhccccCC
Q 011767 83 DPYELLGVPENAS--QDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (478)
Q Consensus 83 ~~Y~vLgv~~~as--~~eIk~ayr~la~~~HPDk~~~~~~-----a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g 151 (478)
++...+|..+.+. .+.++..|+.+++.+|||+....+. +.+.+..++.||.+|.||.+|+.|=.....|
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~~g 77 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLALADG 77 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhccc
Confidence 4566667766543 4569999999999999999876543 3457889999999999999999998765544
No 113
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=95.81 E-value=0.0051 Score=57.07 Aligned_cols=54 Identities=43% Similarity=0.656 Sum_probs=46.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--c-----hHHHHHHHHHHHHHhh
Q 011767 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN--P-----SAKRKFQEIRDAYETL 135 (478)
Q Consensus 82 ~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~--~-----~a~~~f~~i~~Ay~vL 135 (478)
.+.|.+|++...++..+|+++|+++...+|||+-... + .+.+++++|++||+.+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 6899999999999999999999999999999985332 2 3778899999999753
No 114
>TIGR02642 phage_xxxx uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.
Probab=95.45 E-value=0.011 Score=55.03 Aligned_cols=28 Identities=39% Similarity=0.910 Sum_probs=12.9
Q ss_pred ccCCcccccEEEcCCccccCCCcCCceEEe
Q 011767 248 ICSTCRGIGRVTIPPFTSTCSTCKGLGRII 277 (478)
Q Consensus 248 ~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i 277 (478)
+||.|+|+|.++.. ..+|+.|+|+|++.
T Consensus 101 ~C~~C~G~G~~i~~--~~~C~~C~G~G~v~ 128 (186)
T TIGR02642 101 KCPRCRGTGLIQRR--QRECDTCAGTGRFR 128 (186)
T ss_pred cCCCCCCeeEEecC--CCCCCCCCCccEEe
Confidence 44444444444211 13455555555543
No 115
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=94.87 E-value=0.031 Score=59.47 Aligned_cols=44 Identities=20% Similarity=0.409 Sum_probs=34.2
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCc-------hHHHHHHHHHHHHHhh
Q 011767 92 ENASQDEIKKAFHMLAKQYHPDANKNNP-------SAKRKFQEIRDAYETL 135 (478)
Q Consensus 92 ~~as~~eIk~ayr~la~~~HPDk~~~~~-------~a~~~f~~i~~Ay~vL 135 (478)
.=.+.++|||+||+..+..||||.++.+ .|++.|..+++|++.-
T Consensus 398 DLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f 448 (453)
T KOG0431|consen 398 DLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKF 448 (453)
T ss_pred hccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhh
Confidence 3458899999999999999999987753 2566677777777643
No 116
>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]
Probab=94.80 E-value=0.019 Score=56.99 Aligned_cols=58 Identities=29% Similarity=0.639 Sum_probs=36.5
Q ss_pred eeccCCCCCCCccC--CCcccccCCcccccEEEcCCccccCCCcCCceEEeeeccccccCCceE
Q 011767 229 FVPCDSCHGRGFPA--DAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVV 290 (478)
Q Consensus 229 ~~~C~~C~G~G~~~--~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~~ 290 (478)
...|+.|+|.|... ......|+.|-|.-.- ...-...|..|+|+|. ..|.+|+|.|..
T Consensus 198 ~~vc~gc~g~G~~~y~~~~~m~c~sc~G~~~~-k~gt~~~C~~C~G~G~---~~C~tC~grG~k 257 (406)
T KOG2813|consen 198 AMVCHGCSGSGSNSYGIGTPMHCMSCTGVPPP-KIGTHDLCYMCHGRGI---KECHTCKGRGKK 257 (406)
T ss_pred ceeccCcCCCCccccccCcceecccccCCCCC-CCCccchhhhccCCCc---ccCCcccCCCCc
Confidence 35677777766422 2345677777661100 0012557999999996 589999999854
No 117
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=91.90 E-value=0.34 Score=42.50 Aligned_cols=59 Identities=24% Similarity=0.280 Sum_probs=41.1
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhh
Q 011767 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKR 141 (478)
Q Consensus 79 ~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R 141 (478)
++...-..||+|++..+.++|.+.|.+|-...+|++.+. .-.=.+|..|.|.|....+.
T Consensus 55 Mtl~EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGS----fYLQSKV~rAKErl~~El~~ 113 (127)
T PF03656_consen 55 MTLDEARQILNVKEELSREEIQKRYKHLFKANDPSKGGS----FYLQSKVFRAKERLEQELKE 113 (127)
T ss_dssp --HHHHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-----HHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCC----HHHHHHHHHHHHHHHHHHHH
Confidence 334567899999999999999999999999999998764 22334788899998766543
No 118
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=90.33 E-value=0.43 Score=47.89 Aligned_cols=51 Identities=29% Similarity=0.624 Sum_probs=37.3
Q ss_pred cccccceeccCCCCCCCccCC-----CcccccCCcccccEEEcCCccccCCCcCCceEEe
Q 011767 223 HVSFDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRII 277 (478)
Q Consensus 223 ~v~~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i 277 (478)
.........|..|.|+|.... -...+|..|+|.|.+. ...|..|.|.|.+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~----~~~c~~~~g~~~v~ 230 (288)
T KOG0715|consen 175 AEEGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVL----RDNCQACSGAGQVR 230 (288)
T ss_pred cccccccccchhhhCcccccccccCCcceeecccccccceec----cchHHHhhcchhhh
Confidence 344557789999999993221 1122799999999984 34499999999654
No 119
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=82.00 E-value=1.3 Score=43.61 Aligned_cols=41 Identities=32% Similarity=0.623 Sum_probs=22.3
Q ss_pred eccCCCCCCCccCCCcccccCCcccccEEEcC----CccccCCCcCCceEE
Q 011767 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRI 276 (478)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~ 276 (478)
-.|..|.|.++ ..|..|+|+=++... ..-.+|..|+-.|-+
T Consensus 230 ~~C~~CGg~rF------lpC~~C~GS~kv~~~~~~~~~~~rC~~CNENGLv 274 (281)
T KOG2824|consen 230 GVCESCGGARF------LPCSNCHGSCKVHEEEEDDGGVLRCLECNENGLV 274 (281)
T ss_pred CcCCCcCCcce------EecCCCCCceeeeeeccCCCcEEECcccCCCCce
Confidence 35666666554 356666666655431 123456666666654
No 120
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=79.01 E-value=1.9 Score=42.42 Aligned_cols=38 Identities=29% Similarity=0.855 Sum_probs=32.0
Q ss_pred cccCCcccccEEEcCCccccCCCcCCceEEee--------eccccccCCceEe
Q 011767 247 KICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK--------DHCMTCKGSGVVD 291 (478)
Q Consensus 247 ~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~--------~~C~~C~G~G~~~ 291 (478)
..|..|.|.+.+ +|..|+|+-++.. .+|..|+-.|.++
T Consensus 230 ~~C~~CGg~rFl-------pC~~C~GS~kv~~~~~~~~~~~rC~~CNENGLvr 275 (281)
T KOG2824|consen 230 GVCESCGGARFL-------PCSNCHGSCKVHEEEEDDGGVLRCLECNENGLVR 275 (281)
T ss_pred CcCCCcCCcceE-------ecCCCCCceeeeeeccCCCcEEECcccCCCCcee
Confidence 479999999886 7999999998876 5899999888653
No 121
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=78.27 E-value=2 Score=38.66 Aligned_cols=24 Identities=38% Similarity=0.825 Sum_probs=14.9
Q ss_pred eccCCCCCCCccCCCcccccCCcccccEEE
Q 011767 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVT 259 (478)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~ 259 (478)
..|..|.|.++ ..|+.|+|+=++.
T Consensus 100 ~~C~~Cgg~rf------v~C~~C~Gs~k~~ 123 (147)
T cd03031 100 GVCEGCGGARF------VPCSECNGSCKVF 123 (147)
T ss_pred CCCCCCCCcCe------EECCCCCCcceEE
Confidence 34777777654 4566776666553
No 122
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=76.92 E-value=5.4 Score=37.66 Aligned_cols=40 Identities=30% Similarity=0.425 Sum_probs=31.0
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcc
Q 011767 91 PENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138 (478)
Q Consensus 91 ~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp 138 (478)
+++||.+||++|+.++..+|- +| ++.-.+|-.||+.+.=.
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~-----gd---~~~~~~IEaAYD~ILM~ 40 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYA-----GD---EKSREAIEAAYDAILME 40 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhc-----CC---HHHHHHHHHHHHHHHHH
Confidence 478999999999999999983 23 34556789999965433
No 123
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=76.23 E-value=2.5 Score=43.19 Aligned_cols=54 Identities=30% Similarity=0.442 Sum_probs=43.2
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCC----CchHHHHHHHHHHHHHhhhcchhhhhhhcc
Q 011767 94 ASQDEIKKAFHMLAKQYHPDANKN----NPSAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (478)
Q Consensus 94 as~~eIk~ayr~la~~~HPDk~~~----~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~ 147 (478)
++..+|..+|+..++..||++... ....++.|+.|.+||++|++..+|..+|..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~ 61 (335)
T KOG0724|consen 4 ASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDSW 61 (335)
T ss_pred ccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhhh
Confidence 577889999999999999998741 123567899999999999987666566654
No 124
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=75.63 E-value=6 Score=33.96 Aligned_cols=47 Identities=17% Similarity=0.342 Sum_probs=35.1
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCch----HHHHHHHHHHHHHhhhcc
Q 011767 92 ENASQDEIKKAFHMLAKQYHPDANKNNPS----AKRKFQEIRDAYETLRDS 138 (478)
Q Consensus 92 ~~as~~eIk~ayr~la~~~HPDk~~~~~~----a~~~f~~i~~Ay~vL~dp 138 (478)
+..+..+++.|.|.+-++.|||.....|+ .++-++.++.-.+.|..+
T Consensus 4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~~ 54 (112)
T PF14687_consen 4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKKR 54 (112)
T ss_pred hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhcc
Confidence 34567889999999999999998877765 345566777666666543
No 125
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=73.18 E-value=2.1 Score=49.76 Aligned_cols=29 Identities=31% Similarity=0.621 Sum_probs=18.6
Q ss_pred ccCCCcCCceEEe---------eeccccccCCceEece
Q 011767 265 STCSTCKGLGRII---------KDHCMTCKGSGVVDGV 293 (478)
Q Consensus 265 ~~C~~C~G~G~~i---------~~~C~~C~G~G~~~~~ 293 (478)
-.|+.|.|.|.+. ..+|..|+|+.+..+.
T Consensus 737 G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e~ 774 (924)
T TIGR00630 737 GRCEACQGDGVIKIEMHFLPDVYVPCEVCKGKRYNRET 774 (924)
T ss_pred CCCCCCccceEEEEEccCCCCcccCCCCcCCceeChHH
Confidence 3466666666654 3577777777766553
No 126
>PRK14714 DNA polymerase II large subunit; Provisional
Probab=72.56 E-value=2.3 Score=50.04 Aligned_cols=56 Identities=16% Similarity=0.313 Sum_probs=35.9
Q ss_pred eeccCCCCCCCccCCCcccccCCcccccEEEcCCccccCCCcCCce---EEeeeccccccCCceEeceE
Q 011767 229 FVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLG---RIIKDHCMTCKGSGVVDGVK 294 (478)
Q Consensus 229 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G---~~i~~~C~~C~G~G~~~~~k 294 (478)
...|+.|...... ..||.|+..-.. ...|+.|+..= ......|+.|...-+....+
T Consensus 667 ~rkCPkCG~~t~~-----~fCP~CGs~te~-----vy~CPsCGaev~~des~a~~CP~CGtplv~~~~~ 725 (1337)
T PRK14714 667 RRRCPSCGTETYE-----NRCPDCGTHTEP-----VYVCPDCGAEVPPDESGRVECPRCDVELTPYQRR 725 (1337)
T ss_pred EEECCCCCCcccc-----ccCcccCCcCCC-----ceeCccCCCccCCCccccccCCCCCCcccccceE
Confidence 5689999876432 389999876421 23799998741 00133799999875544433
No 127
>COG1198 PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]
Probab=71.84 E-value=3.1 Score=46.91 Aligned_cols=53 Identities=17% Similarity=0.415 Sum_probs=39.1
Q ss_pred ccceeccCCCCCCCccCCCcccccCCcccccEEEcCCccccCCCcCCceEEeeeccccccCC
Q 011767 226 FDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (478)
Q Consensus 226 ~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~C~G~ 287 (478)
|.....|..|.- ...||.|...=......-.-.|..|+-. ..+...|+.|.+.
T Consensus 432 ys~~l~C~~Cg~--------v~~Cp~Cd~~lt~H~~~~~L~CH~Cg~~-~~~p~~Cp~Cgs~ 484 (730)
T COG1198 432 YAPLLLCRDCGY--------IAECPNCDSPLTLHKATGQLRCHYCGYQ-EPIPQSCPECGSE 484 (730)
T ss_pred ccceeecccCCC--------cccCCCCCcceEEecCCCeeEeCCCCCC-CCCCCCCCCCCCC
Confidence 345578999975 3689999887544333456789999888 5567899999975
No 128
>PRK04023 DNA polymerase II large subunit; Validated
Probab=70.22 E-value=3.2 Score=47.76 Aligned_cols=68 Identities=22% Similarity=0.322 Sum_probs=42.7
Q ss_pred eehhhcc-CccccccccceeccCCCCCCCccCCCcccccCCcccccEEEcCCccccCCCcCCceEEeeeccccccCCceE
Q 011767 212 SFAEAAK-GCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVV 290 (478)
Q Consensus 212 tlee~~~-G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~~ 290 (478)
++.+|+. +...++.+. ...|+.|.-.+ ....||.|+..-. ..-.|+.|+-... ...|+.|...-..
T Consensus 609 ~i~~A~~~~g~~eVEVg-~RfCpsCG~~t-----~~frCP~CG~~Te-----~i~fCP~CG~~~~--~y~CPKCG~El~~ 675 (1121)
T PRK04023 609 DINKAAKYKGTIEVEIG-RRKCPSCGKET-----FYRRCPFCGTHTE-----PVYRCPRCGIEVE--EDECEKCGREPTP 675 (1121)
T ss_pred cHHHHHhcCCceeeccc-CccCCCCCCcC-----CcccCCCCCCCCC-----cceeCccccCcCC--CCcCCCCCCCCCc
Confidence 4566766 455555543 34699998664 3468999987621 2346999944432 3679999877543
Q ss_pred ec
Q 011767 291 DG 292 (478)
Q Consensus 291 ~~ 292 (478)
..
T Consensus 676 ~s 677 (1121)
T PRK04023 676 YS 677 (1121)
T ss_pred cc
Confidence 33
No 129
>PF13446 RPT: A repeated domain in UCH-protein
Probab=66.17 E-value=9.6 Score=28.71 Aligned_cols=45 Identities=27% Similarity=0.541 Sum_probs=32.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhc
Q 011767 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRD 137 (478)
Q Consensus 82 ~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d 137 (478)
.+-|+.||++++.+.+.|-.+|+.... - +| .......+|..++.+
T Consensus 5 ~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~-~-------~P---~~~~~~r~AL~~Ia~ 49 (62)
T PF13446_consen 5 EEAYEILGIDEDTDDDFIISAFQSKVN-D-------DP---SQKDTLREALRVIAE 49 (62)
T ss_pred HHHHHHhCcCCCCCHHHHHHHHHHHHH-c-------Ch---HhHHHHHHHHHHHHH
Confidence 356999999999999999999999876 1 22 233345566666654
No 130
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=64.62 E-value=6.2 Score=35.55 Aligned_cols=37 Identities=32% Similarity=0.836 Sum_probs=27.8
Q ss_pred cccCCcccccEEEcCCccccCCCcCCceEEee---------eccccccCCceE
Q 011767 247 KICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK---------DHCMTCKGSGVV 290 (478)
Q Consensus 247 ~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~---------~~C~~C~G~G~~ 290 (478)
..|..|.|.+.+ +|..|+|+-++.. .+|+.|+-.|.+
T Consensus 100 ~~C~~Cgg~rfv-------~C~~C~Gs~k~~~~~~~~~~~~~rC~~Cnengl~ 145 (147)
T cd03031 100 GVCEGCGGARFV-------PCSECNGSCKVFAENATAAGGFLRCPECNENGLV 145 (147)
T ss_pred CCCCCCCCcCeE-------ECCCCCCcceEEeccCcccccEEECCCCCccccc
Confidence 468889888876 6999998877652 378888866654
No 131
>smart00709 Zpr1 Duplicated domain in the epidermal growth factor- and elongation factor-1alpha-binding protein Zpr1. Also present in archaeal proteins.
Probab=64.01 E-value=9.8 Score=34.81 Aligned_cols=20 Identities=30% Similarity=0.393 Sum_probs=13.6
Q ss_pred EEEEEecCcCCCCCEEEECC
Q 011767 295 EVKVTIPAGVDSGDTIRVPE 314 (478)
Q Consensus 295 ~~~V~Ip~G~~~G~~i~l~g 314 (478)
.+.+.||||...|..-++.|
T Consensus 81 El~~ei~pg~~~g~itTVEG 100 (160)
T smart00709 81 ELDLEIPPGPLGGFITTVEG 100 (160)
T ss_pred eeeEEecCCCCCcEEEehHH
Confidence 56677777777776666654
No 132
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=62.66 E-value=4.1 Score=47.50 Aligned_cols=22 Identities=23% Similarity=0.152 Sum_probs=14.1
Q ss_pred EeCCC-CCCHHHHHHHHHHHHHh
Q 011767 412 VNFPT-ALNERQRAILEEFAEEE 433 (478)
Q Consensus 412 V~~P~-~ls~~q~~ll~~~~~~~ 433 (478)
++=|. .|.+..++.|.+++...
T Consensus 857 LDEPtsGLD~~~~~~L~~~L~~l 879 (943)
T PRK00349 857 LDEPTTGLHFEDIRKLLEVLHRL 879 (943)
T ss_pred EECCCCCCCHHHHHHHHHHHHHH
Confidence 45565 47777777777666543
No 133
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=62.32 E-value=3.5 Score=47.96 Aligned_cols=22 Identities=23% Similarity=0.164 Sum_probs=13.9
Q ss_pred EeCCC-CCCHHHHHHHHHHHHHh
Q 011767 412 VNFPT-ALNERQRAILEEFAEEE 433 (478)
Q Consensus 412 V~~P~-~ls~~q~~ll~~~~~~~ 433 (478)
++=|. .|.+..++.|.+++...
T Consensus 855 LDEPtsgLD~~~~~~L~~~L~~l 877 (924)
T TIGR00630 855 LDEPTTGLHFDDIKKLLEVLQRL 877 (924)
T ss_pred EECCCCCCCHHHHHHHHHHHHHH
Confidence 45564 47777777776666544
No 134
>TIGR00310 ZPR1_znf ZPR1 zinc finger domain.
Probab=61.26 E-value=15 Score=34.55 Aligned_cols=20 Identities=20% Similarity=0.320 Sum_probs=14.1
Q ss_pred EEEEEecCc-CCCCCEEEECC
Q 011767 295 EVKVTIPAG-VDSGDTIRVPE 314 (478)
Q Consensus 295 ~~~V~Ip~G-~~~G~~i~l~g 314 (478)
.+.+.|||| +..|..-++.|
T Consensus 80 El~lei~pg~~~~G~iTTVEG 100 (192)
T TIGR00310 80 ELGLDIEPGPTSGGFITNLEG 100 (192)
T ss_pred ceEEEECCCccCCceEEeeHh
Confidence 566777787 57777777755
No 135
>TIGR00595 priA primosomal protein N'. All proteins in this family for which functions are known are components of the primosome which is involved in replication, repair, and recombination.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=58.51 E-value=7.5 Score=42.24 Aligned_cols=52 Identities=19% Similarity=0.301 Sum_probs=34.7
Q ss_pred cceeccCCCCCCCccCCCcccccCCcccccEEEcCCccccCCCcCCceEEeeeccccccCC
Q 011767 227 DAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (478)
Q Consensus 227 ~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~C~G~ 287 (478)
.....|..|.-. ..||.|.+.=........-.|..|+-+- .+...|+.|.+.
T Consensus 211 a~~~~C~~Cg~~--------~~C~~C~~~l~~h~~~~~l~Ch~Cg~~~-~~~~~Cp~C~s~ 262 (505)
T TIGR00595 211 SKNLLCRSCGYI--------LCCPNCDVSLTYHKKEGKLRCHYCGYQE-PIPKTCPQCGSE 262 (505)
T ss_pred CCeeEhhhCcCc--------cCCCCCCCceEEecCCCeEEcCCCcCcC-CCCCCCCCCCCC
Confidence 345688888753 6899998765443333456788886443 345689999875
No 136
>PRK14873 primosome assembly protein PriA; Provisional
Probab=58.36 E-value=8.4 Score=43.32 Aligned_cols=50 Identities=20% Similarity=0.442 Sum_probs=35.9
Q ss_pred ceeccCCCCCCCccCCCcccccCCcccccEEEcCCccccCCCcCCceEEeeeccccccCC
Q 011767 228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~C~G~ 287 (478)
....|..|.- ...|+.|.+.=......-.-.|..|+-.- ....|+.|.+.
T Consensus 382 p~l~C~~Cg~--------~~~C~~C~~~L~~h~~~~~l~Ch~CG~~~--~p~~Cp~Cgs~ 431 (665)
T PRK14873 382 PSLACARCRT--------PARCRHCTGPLGLPSAGGTPRCRWCGRAA--PDWRCPRCGSD 431 (665)
T ss_pred CeeEhhhCcC--------eeECCCCCCceeEecCCCeeECCCCcCCC--cCccCCCCcCC
Confidence 4468888874 46899998865543333456799998753 47899999875
No 137
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=57.42 E-value=5.9 Score=49.12 Aligned_cols=28 Identities=11% Similarity=0.154 Sum_probs=20.0
Q ss_pred CcEEEEEEEeCCCC-CCHHHHHHHHHHHHHhc
Q 011767 404 GDQYVRFRVNFPTA-LNERQRAILEEFAEEEI 434 (478)
Q Consensus 404 GdL~v~~~V~~P~~-ls~~q~~ll~~~~~~~~ 434 (478)
+.||| .+=|.. |.+.+.+.|-+++....
T Consensus 1721 ~~lyi---lDEPt~GLh~~d~~~Ll~~l~~L~ 1749 (1809)
T PRK00635 1721 PTLFL---LDEIATSLDNQQKSALLVQLRTLV 1749 (1809)
T ss_pred CcEEE---EcCCCCCCCHHHHHHHHHHHHHHH
Confidence 45655 577875 99988888888876554
No 138
>PRK05580 primosome assembly protein PriA; Validated
Probab=54.96 E-value=8.7 Score=43.33 Aligned_cols=50 Identities=20% Similarity=0.416 Sum_probs=32.3
Q ss_pred eeccCCCCCCCccCCCcccccCCcccccEEEcCCccccCCCcCCceEEeeeccccccCC
Q 011767 229 FVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (478)
Q Consensus 229 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~C~G~ 287 (478)
...|..|.-. ..|+.|.+.=........-.|..|+-+- .+...|+.|.+.
T Consensus 381 ~~~C~~Cg~~--------~~C~~C~~~l~~h~~~~~l~Ch~Cg~~~-~~~~~Cp~Cg~~ 430 (679)
T PRK05580 381 FLLCRDCGWV--------AECPHCDASLTLHRFQRRLRCHHCGYQE-PIPKACPECGST 430 (679)
T ss_pred ceEhhhCcCc--------cCCCCCCCceeEECCCCeEECCCCcCCC-CCCCCCCCCcCC
Confidence 5678888753 5799998853332223355688887553 345678888765
No 139
>PF14353 CpXC: CpXC protein
Probab=53.02 E-value=9.5 Score=33.19 Aligned_cols=13 Identities=38% Similarity=0.718 Sum_probs=8.7
Q ss_pred ccccCCCcCCceE
Q 011767 263 FTSTCSTCKGLGR 275 (478)
Q Consensus 263 ~~~~C~~C~G~G~ 275 (478)
+..+|+.|+....
T Consensus 37 ~~~~CP~Cg~~~~ 49 (128)
T PF14353_consen 37 FSFTCPSCGHKFR 49 (128)
T ss_pred CEEECCCCCCcee
Confidence 3667777776664
No 140
>PF03833 PolC_DP2: DNA polymerase II large subunit DP2; InterPro: IPR016033 DP2 is the large subunit of a two-subunit novel archaebacterial replicative DNA polymerase first characterised for Pyrococcus furiosus. The structure of DP2 appears to be organised as a ~950 residue component separated from a ~300 residue component by a ~150 residue intein. The other subunit, DP1, has sequence similarity to the eukaryotic DNA polymerase delta small subunit. This entry represents the N-terminal ~950 residue component of DP2.; GO: 0003887 DNA-directed DNA polymerase activity; PDB: 3O59_X.
Probab=52.93 E-value=4.5 Score=45.78 Aligned_cols=52 Identities=19% Similarity=0.441 Sum_probs=0.0
Q ss_pred eeccCCCCCCCccCCCcccccCCcccccEEEcCCccccCCCcCCceEEeeeccccccCCceEec
Q 011767 229 FVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDG 292 (478)
Q Consensus 229 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~ 292 (478)
...|+.|.-... ...||.|+..-.. .-.|+.|+-. +....|++|........
T Consensus 655 ~r~Cp~Cg~~t~-----~~~Cp~CG~~T~~-----~~~Cp~C~~~--~~~~~C~~C~~~~~~~~ 706 (900)
T PF03833_consen 655 RRRCPKCGKETF-----YNRCPECGSHTEP-----VYVCPDCGIE--VEEDECPKCGRETTSYS 706 (900)
T ss_dssp ----------------------------------------------------------------
T ss_pred cccCcccCCcch-----hhcCcccCCcccc-----ceeccccccc--cCccccccccccCcccc
Confidence 346888876543 4688888775432 3468888653 33568999987754433
No 141
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=52.39 E-value=9.8 Score=44.48 Aligned_cols=30 Identities=33% Similarity=0.602 Sum_probs=20.0
Q ss_pred cCCCcCCceEEe---------eeccccccCCceEeceEE
Q 011767 266 TCSTCKGLGRII---------KDHCMTCKGSGVVDGVKE 295 (478)
Q Consensus 266 ~C~~C~G~G~~i---------~~~C~~C~G~G~~~~~k~ 295 (478)
.|+.|.|.|.+. ...|..|+|..+..+...
T Consensus 740 ~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e~l~ 778 (943)
T PRK00349 740 RCEACQGDGVIKIEMHFLPDVYVPCDVCKGKRYNRETLE 778 (943)
T ss_pred CCCcccccceEEEEeccCCCccccCccccCccccccceE
Confidence 477777777664 257888888776665443
No 142
>PF12991 DUF3875: Domain of unknown function, B. Theta Gene description (DUF3875); InterPro: IPR024451 This domain of unknown function is found in proteins from Bacteroidetes, including the conjugation system ATPase, TraG.
Probab=52.16 E-value=17 Score=26.89 Aligned_cols=24 Identities=38% Similarity=0.639 Sum_probs=18.9
Q ss_pred CCcEEEEEEEeCCCC--CCHHHHHHH
Q 011767 403 HGDQYVRFRVNFPTA--LNERQRAIL 426 (478)
Q Consensus 403 ~GdL~v~~~V~~P~~--ls~~q~~ll 426 (478)
.||+.|-|+|.+|+- ||.++-+.+
T Consensus 27 ~gDiTv~f~v~LPEiFtls~~eYea~ 52 (54)
T PF12991_consen 27 NGDITVAFRVELPEIFTLSEAEYEAI 52 (54)
T ss_pred CCCEEEEEEecCCeeEEechhHhHHh
Confidence 499999999999995 666655443
No 143
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=51.15 E-value=8.8 Score=20.25 Aligned_cols=13 Identities=46% Similarity=0.991 Sum_probs=10.5
Q ss_pred HHHHHHHHHHhhh
Q 011767 124 KFQEIRDAYETLR 136 (478)
Q Consensus 124 ~f~~i~~Ay~vL~ 136 (478)
.|..|..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 5788899998874
No 144
>PRK03564 formate dehydrogenase accessory protein FdhE; Provisional
Probab=49.31 E-value=17 Score=36.93 Aligned_cols=21 Identities=19% Similarity=0.740 Sum_probs=11.0
Q ss_pred cCCCcCCceEEeeeccccccC
Q 011767 266 TCSTCKGLGRIIKDHCMTCKG 286 (478)
Q Consensus 266 ~C~~C~G~G~~i~~~C~~C~G 286 (478)
.|..|.-.=...+..|+.|..
T Consensus 214 ~CslC~teW~~~R~~C~~Cg~ 234 (309)
T PRK03564 214 HCNLCESEWHVVRVKCSNCEQ 234 (309)
T ss_pred EcCCCCCcccccCccCCCCCC
Confidence 355555555555555555543
No 145
>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair]
Probab=47.91 E-value=10 Score=43.09 Aligned_cols=30 Identities=27% Similarity=0.560 Sum_probs=20.5
Q ss_pred cccCCCcCCceEEee---------eccccccCCceEece
Q 011767 264 TSTCSTCKGLGRIIK---------DHCMTCKGSGVVDGV 293 (478)
Q Consensus 264 ~~~C~~C~G~G~~i~---------~~C~~C~G~G~~~~~ 293 (478)
.-.|..|+|.|.+.- .+|..|+|+-+.+++
T Consensus 730 GGRCe~C~GdG~ikIeM~FLpdVyv~CevC~GkRYn~Et 768 (935)
T COG0178 730 GGRCEACQGDGVIKIEMHFLPDVYVPCEVCHGKRYNRET 768 (935)
T ss_pred CcCCccccCCceEEEEeccCCCceeeCCCcCCcccccce
Confidence 346888888886531 578888887776653
No 146
>PRK12336 translation initiation factor IF-2 subunit beta; Provisional
Probab=46.77 E-value=48 Score=31.42 Aligned_cols=14 Identities=29% Similarity=0.662 Sum_probs=9.4
Q ss_pred ccceeccCCCCCCC
Q 011767 226 FDAFVPCDSCHGRG 239 (478)
Q Consensus 226 ~~~~~~C~~C~G~G 239 (478)
+...+.|+.|+-.-
T Consensus 95 i~~yV~C~~C~~pd 108 (201)
T PRK12336 95 VDEYVICSECGLPD 108 (201)
T ss_pred HHheEECCCCCCCC
Confidence 45668888887543
No 147
>TIGR00340 zpr1_rel ZPR1-related zinc finger protein. A model ZPR1_znf (TIGR00310) has been created to describe the domain shared by this protein and ZPR1.
Probab=45.87 E-value=26 Score=32.09 Aligned_cols=20 Identities=20% Similarity=0.340 Sum_probs=12.9
Q ss_pred EEEEEecCcC-CCCCEEEECC
Q 011767 295 EVKVTIPAGV-DSGDTIRVPE 314 (478)
Q Consensus 295 ~~~V~Ip~G~-~~G~~i~l~g 314 (478)
.+.+.||||. ..|..-++.|
T Consensus 78 El~lei~pg~~~~G~iTTVEG 98 (163)
T TIGR00340 78 ELGIKIEPGPASQGYISNIEG 98 (163)
T ss_pred ceeEEecCCCcCCceEEehHh
Confidence 5667777776 5666555654
No 148
>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length. The function of this family is unknown.
Probab=44.27 E-value=12 Score=36.26 Aligned_cols=12 Identities=50% Similarity=1.262 Sum_probs=7.0
Q ss_pred cccCCcccccEE
Q 011767 247 KICSTCRGIGRV 258 (478)
Q Consensus 247 ~~C~~C~G~G~~ 258 (478)
.+||.|.|+|++
T Consensus 39 vtCPTCqGtGrI 50 (238)
T PF07092_consen 39 VTCPTCQGTGRI 50 (238)
T ss_pred CcCCCCcCCccC
Confidence 456666666654
No 149
>PRK05978 hypothetical protein; Provisional
Probab=43.02 E-value=12 Score=33.68 Aligned_cols=8 Identities=50% Similarity=1.281 Sum_probs=4.6
Q ss_pred eecccccc
Q 011767 278 KDHCMTCK 285 (478)
Q Consensus 278 ~~~C~~C~ 285 (478)
.+.|+.|.
T Consensus 52 ~~~C~~CG 59 (148)
T PRK05978 52 VDHCAACG 59 (148)
T ss_pred CCCccccC
Confidence 45566665
No 150
>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.
Probab=41.87 E-value=16 Score=31.07 Aligned_cols=26 Identities=19% Similarity=0.585 Sum_probs=14.9
Q ss_pred ceeccCCCCCCCccCCCcccccCCcc
Q 011767 228 AFVPCDSCHGRGFPADAKTKICSTCR 253 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~~~~C~~C~ 253 (478)
.+.+|+.|.-.-+--+....+||.|+
T Consensus 8 tKR~Cp~CG~kFYDLnk~PivCP~CG 33 (108)
T PF09538_consen 8 TKRTCPSCGAKFYDLNKDPIVCPKCG 33 (108)
T ss_pred CcccCCCCcchhccCCCCCccCCCCC
Confidence 44567776655555555555566653
No 151
>TIGR00310 ZPR1_znf ZPR1 zinc finger domain.
Probab=41.03 E-value=1.7e+02 Score=27.65 Aligned_cols=27 Identities=22% Similarity=0.521 Sum_probs=19.7
Q ss_pred CeEEEecCCCEEEEEeCCC-CCCCcEEEEcCCCc
Q 011767 362 GKVDVPTLSGKVQVKIPKG-VQPGQLLVLRGKGL 394 (478)
Q Consensus 362 ~~~~i~tldG~~~v~ip~g-~~~g~~~~i~g~G~ 394 (478)
+++.||- +.+.|||| ++.|..-.| +|+
T Consensus 74 ati~IPE----l~lei~pg~~~~G~iTTV--EGl 101 (192)
T TIGR00310 74 ATIRIPE----LGLDIEPGPTSGGFITNL--EGV 101 (192)
T ss_pred cEEEccc----eEEEECCCccCCceEEee--HhH
Confidence 4556654 57889998 688988888 554
No 152
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=40.71 E-value=96 Score=24.50 Aligned_cols=29 Identities=17% Similarity=0.226 Sum_probs=25.4
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhC
Q 011767 83 DPYELLGVPENASQDEIKKAFHMLAKQYH 111 (478)
Q Consensus 83 ~~Y~vLgv~~~as~~eIk~ayr~la~~~H 111 (478)
|.-+++++++.|+..||+.|-++.++|..
T Consensus 4 NIk~LfnfdPPAT~~EvrdAAlQfVRKlS 32 (88)
T COG5552 4 NIKELFNFDPPATPVEVRDAALQFVRKLS 32 (88)
T ss_pred chHHHhCCCCCCCcHHHHHHHHHHHHHhc
Confidence 45678899999999999999999998874
No 153
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=39.82 E-value=31 Score=30.24 Aligned_cols=23 Identities=22% Similarity=0.354 Sum_probs=16.5
Q ss_pred eEEEEEEecCcCCCCCEEEECCC
Q 011767 293 VKEVKVTIPAGVDSGDTIRVPEA 315 (478)
Q Consensus 293 ~k~~~V~Ip~G~~~G~~i~l~g~ 315 (478)
...+++.-+.+.+.||.+.+.-.
T Consensus 41 ~~~~~~~~~~~~~~GD~V~v~i~ 63 (135)
T PF04246_consen 41 PITFRAPNPIGAKVGDRVEVEIP 63 (135)
T ss_pred cEEEEecCCCCCCCCCEEEEEec
Confidence 35667777788888888877543
No 154
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=39.78 E-value=1.3e+02 Score=23.89 Aligned_cols=54 Identities=19% Similarity=0.196 Sum_probs=34.8
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHH----HHHHHHHhhhc
Q 011767 83 DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQ----EIRDAYETLRD 137 (478)
Q Consensus 83 ~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~----~i~~Ay~vL~d 137 (478)
|--.+.|+.+.|+.+||..|=.|.++|..=-..+. ....+.|. +|..|-.-|.|
T Consensus 4 nI~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~Ps-~an~eaF~~AV~eva~at~~LL~ 61 (78)
T PF10041_consen 4 NIKTLRNFEPPATDEEIRAAALQYVRKVSGFRKPS-AANAEAFDRAVAEVAAATRRLLD 61 (78)
T ss_pred chhhhcCCCCCCCHHHHHHHHHHHHHHHccCCCcc-hhhHHHHHHHHHHHHHHHHHHHH
Confidence 33456688999999999999999999975433332 23345555 44444444443
No 155
>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair]
Probab=37.12 E-value=27 Score=39.88 Aligned_cols=31 Identities=29% Similarity=0.608 Sum_probs=20.6
Q ss_pred eccccccCCceEeceEEE--EEEecCcCCCCCE
Q 011767 279 DHCMTCKGSGVVDGVKEV--KVTIPAGVDSGDT 309 (478)
Q Consensus 279 ~~C~~C~G~G~~~~~k~~--~V~Ip~G~~~G~~ 309 (478)
-+|..|.|.|++.-+..+ .|-||.-+.+|.+
T Consensus 731 GRCe~C~GdG~ikIeM~FLpdVyv~CevC~GkR 763 (935)
T COG0178 731 GRCEACQGDGVIKIEMHFLPDVYVPCEVCHGKR 763 (935)
T ss_pred cCCccccCCceEEEEeccCCCceeeCCCcCCcc
Confidence 578888888877544433 4667777777764
No 156
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=36.90 E-value=12 Score=46.46 Aligned_cols=29 Identities=38% Similarity=0.669 Sum_probs=21.7
Q ss_pred ccCCCcCCceEEe---------eeccccccCCceEece
Q 011767 265 STCSTCKGLGRII---------KDHCMTCKGSGVVDGV 293 (478)
Q Consensus 265 ~~C~~C~G~G~~i---------~~~C~~C~G~G~~~~~ 293 (478)
-.|+.|.|.|.+. ..+|..|+|+.+..+.
T Consensus 1608 GrC~~C~G~G~i~i~m~fl~dv~~~C~~C~G~R~~~e~ 1645 (1809)
T PRK00635 1608 GQCSDCWGLGYQWIDRAFYALEKRPCPTCSGFRIQPLA 1645 (1809)
T ss_pred CCCCCCccCceEEEecccCCCcccCCCCCCCcCCCHHH
Confidence 3588888888763 2578999988877664
No 157
>PF07295 DUF1451: Protein of unknown function (DUF1451); InterPro: IPR009912 This family consists of several hypothetical bacterial proteins of around 160 residues in length. Members of this family contain four highly conserved cysteine resides toward the C-terminal region of the protein. The function of this family is unknown.
Probab=36.84 E-value=33 Score=30.87 Aligned_cols=32 Identities=22% Similarity=0.401 Sum_probs=14.3
Q ss_pred cccccCCcccccEEEcCCccccCCCcCCceEE
Q 011767 245 KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRI 276 (478)
Q Consensus 245 ~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~ 276 (478)
..-+|..|+-.=....+..-.+|+.|+++.+.
T Consensus 111 G~l~C~~Cg~~~~~~~~~~l~~Cp~C~~~~F~ 142 (146)
T PF07295_consen 111 GTLVCENCGHEVELTHPERLPPCPKCGHTEFT 142 (146)
T ss_pred ceEecccCCCEEEecCCCcCCCCCCCCCCeee
Confidence 34455555443333222223455555555443
No 158
>PF03589 Antiterm: Antitermination protein; InterPro: IPR003222 This entry consists of antitermination proteins found in bacteriophages, such as protein Q from phage lambda, and some bacterial homologues. Protein Q positively regulates expression of the phage late gene operon by binding to the bacterial host RNA polymerase (RNAP) and modifying it. The modified RNAP transcribes through termination sites that otherwise prevent expression of the regulated genes [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent
Probab=34.43 E-value=20 Score=29.84 Aligned_cols=10 Identities=40% Similarity=1.036 Sum_probs=5.3
Q ss_pred cCCCcCCceE
Q 011767 266 TCSTCKGLGR 275 (478)
Q Consensus 266 ~C~~C~G~G~ 275 (478)
.|..|.|.|.
T Consensus 34 ~c~rcgg~G~ 43 (95)
T PF03589_consen 34 DCERCGGRGY 43 (95)
T ss_pred hhhhhcCCCC
Confidence 4555555554
No 159
>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300. Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.
Probab=33.84 E-value=27 Score=30.56 Aligned_cols=27 Identities=4% Similarity=0.089 Sum_probs=17.1
Q ss_pred ceeccCCCCCCCccCCCcccccCCccc
Q 011767 228 AFVPCDSCHGRGFPADAKTKICSTCRG 254 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G 254 (478)
.+.+|+.|.-.-+--+....+||.|+-
T Consensus 8 tKr~Cp~cg~kFYDLnk~p~vcP~cg~ 34 (129)
T TIGR02300 8 TKRICPNTGSKFYDLNRRPAVSPYTGE 34 (129)
T ss_pred ccccCCCcCccccccCCCCccCCCcCC
Confidence 455677776666655556666776644
No 160
>cd02639 R3H_RRM R3H domain of mainly fungal proteins which are associated with a RNA recognition motif (RRM) domain. Present in this group is the RNA-binding post-transcriptional regulator Cip2 (Csx1-interacting protein 2) involved in counteracting Csx1 function. Csx1 plays a central role in controlling gene expression during oxidative stress. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=33.77 E-value=64 Score=24.44 Aligned_cols=26 Identities=27% Similarity=0.386 Sum_probs=22.5
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHhc
Q 011767 409 RFRVNFPTALNERQRAILEEFAEEEI 434 (478)
Q Consensus 409 ~~~V~~P~~ls~~q~~ll~~~~~~~~ 434 (478)
..+..||.+||+.||..+-.++....
T Consensus 17 ~~eL~Fp~~ls~~eRriih~la~~lG 42 (60)
T cd02639 17 RDELAFPSSLSPAERRIVHLLASRLG 42 (60)
T ss_pred ceEEEcCCCCCHHHHHHHHHHHHHcC
Confidence 56788999999999999999987653
No 161
>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length. The function of this family is unknown.
Probab=33.05 E-value=20 Score=34.88 Aligned_cols=15 Identities=33% Similarity=0.731 Sum_probs=10.1
Q ss_pred eeccCCCCCCCccCC
Q 011767 229 FVPCDSCHGRGFPAD 243 (478)
Q Consensus 229 ~~~C~~C~G~G~~~~ 243 (478)
.+.|++|+|+|..+.
T Consensus 38 ~vtCPTCqGtGrIP~ 52 (238)
T PF07092_consen 38 SVTCPTCQGTGRIPR 52 (238)
T ss_pred CCcCCCCcCCccCCc
Confidence 456777777776653
No 162
>TIGR01562 FdhE formate dehydrogenase accessory protein FdhE. The only sequence scoring between trusted and noise is that from Aquifex aeolicus, which shows certain structural differences from the proteobacterial forms in the alignment. However it is notable that A. aeolicus also has a sequence scoring above trusted to the alpha subunit of formate dehydrogenase (TIGR01553).
Probab=32.19 E-value=43 Score=33.94 Aligned_cols=16 Identities=19% Similarity=0.079 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHhCCCC
Q 011767 99 IKKAFHMLAKQYHPDA 114 (478)
Q Consensus 99 Ik~ayr~la~~~HPDk 114 (478)
.++.+.+|...+.|..
T Consensus 100 w~~~l~~LL~~l~~~~ 115 (305)
T TIGR01562 100 WLPWLDALLAGYPAPA 115 (305)
T ss_pred HHHHHHHHHHHhcccc
Confidence 3666677777777663
No 163
>PF08792 A2L_zn_ribbon: A2L zinc ribbon domain; InterPro: IPR014900 This zinc ribbon protein is found associated with some viral A2L transcription factors [].
Probab=31.74 E-value=29 Score=22.97 Aligned_cols=11 Identities=55% Similarity=1.017 Sum_probs=4.8
Q ss_pred ccCCcccccEE
Q 011767 248 ICSTCRGIGRV 258 (478)
Q Consensus 248 ~C~~C~G~G~~ 258 (478)
.|+.|++.|.+
T Consensus 5 ~C~~C~~~~i~ 15 (33)
T PF08792_consen 5 KCSKCGGNGIV 15 (33)
T ss_pred EcCCCCCCeEE
Confidence 34444444433
No 164
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=29.86 E-value=56 Score=20.61 Aligned_cols=16 Identities=19% Similarity=0.482 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHhC
Q 011767 96 QDEIKKAFHMLAKQYH 111 (478)
Q Consensus 96 ~~eIk~ayr~la~~~H 111 (478)
.++.+.+.|+.|+.||
T Consensus 10 ~~~~r~~lR~AALeYH 25 (28)
T PF12434_consen 10 KEDKRAQLRQAALEYH 25 (28)
T ss_pred hHHHHHHHHHHHHHhc
Confidence 3778999999999999
No 165
>smart00276 GLECT Galectin. Galectin - galactose-binding lectin
Probab=29.79 E-value=66 Score=27.83 Aligned_cols=42 Identities=33% Similarity=0.561 Sum_probs=30.1
Q ss_pred EEeCCCCCCCcEEEEcCCCccCCC-----CCCCCCcEEEEEEEeCCC
Q 011767 375 VKIPKGVQPGQLLVLRGKGLAKNG-----LFLDHGDQYVRFRVNFPT 416 (478)
Q Consensus 375 v~ip~g~~~g~~~~i~g~G~p~~~-----~~~~~GdL~v~~~V~~P~ 416 (478)
..||.+..+|+.++|.|.=.+..+ .....+|+.++|++.|++
T Consensus 3 ~~lp~~l~~G~~i~i~G~~~~~~~~F~inl~~~~~di~lH~n~rf~~ 49 (128)
T smart00276 3 LPIPGGLKPGQTLTVRGIVLPDAKRFSINLLTGGDDIALHFNPRFNE 49 (128)
T ss_pred ccCCCCCCCCCEEEEEEEECCCCCEEEEEeecCCCCEEEEEeccCCC
Confidence 467888999999999776443321 112337999999999974
No 166
>PRK00564 hypA hydrogenase nickel incorporation protein; Provisional
Probab=29.13 E-value=51 Score=28.38 Aligned_cols=12 Identities=17% Similarity=0.512 Sum_probs=7.1
Q ss_pred cceeccCCCCCC
Q 011767 227 DAFVPCDSCHGR 238 (478)
Q Consensus 227 ~~~~~C~~C~G~ 238 (478)
+....|..|.-.
T Consensus 69 p~~~~C~~Cg~~ 80 (117)
T PRK00564 69 KVELECKDCSHV 80 (117)
T ss_pred CCEEEhhhCCCc
Confidence 445667777633
No 167
>PF09862 DUF2089: Protein of unknown function (DUF2089); InterPro: IPR018658 This family consists of various hypothetical prokaryotic proteins.
Probab=28.97 E-value=37 Score=29.16 Aligned_cols=20 Identities=25% Similarity=0.690 Sum_probs=15.3
Q ss_pred CCCcCCceEEeeeccccccC
Q 011767 267 CSTCKGLGRIIKDHCMTCKG 286 (478)
Q Consensus 267 C~~C~G~G~~i~~~C~~C~G 286 (478)
||.|++.=.+.+-.|..|..
T Consensus 1 CPvCg~~l~vt~l~C~~C~t 20 (113)
T PF09862_consen 1 CPVCGGELVVTRLKCPSCGT 20 (113)
T ss_pred CCCCCCceEEEEEEcCCCCC
Confidence 77777777777888888874
No 168
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=28.90 E-value=1.9e+02 Score=21.85 Aligned_cols=42 Identities=12% Similarity=0.229 Sum_probs=28.6
Q ss_pred eCCCCCCHHHHHHHHHHHHHhccCCCCCccchhHHHHHHHHhcCc
Q 011767 413 NFPTALNERQRAILEEFAEEEINNENNTSAEENWWQRIVERVRAP 457 (478)
Q Consensus 413 ~~P~~ls~~q~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (478)
..+.-||.+|-+.-.+... .|.........||+.+.+...+|
T Consensus 16 ~~~~GLs~~ev~~r~~~~G---~N~l~~~~~~s~~~~~~~~f~~~ 57 (69)
T PF00690_consen 16 SSSQGLSSEEVEERRKKYG---PNELPEPKKKSLWRIFLKQFKNP 57 (69)
T ss_dssp BTSSBBTHHHHHHHHHHHS---SSSTTTTTSSSHHHHHHHHTTSH
T ss_pred CCCCCCCHHHHHHHHHhcc---cccccccccCcHHHHHHHHHHhH
Confidence 4456688877555544432 45554566789999999999775
No 169
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=27.45 E-value=41 Score=37.70 Aligned_cols=49 Identities=18% Similarity=0.529 Sum_probs=32.1
Q ss_pred eccCCCCCCCccCCCcccccCCcccccEEEcCCccccCCCcCCceEEeeeccccccCC
Q 011767 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (478)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~C~G~ 287 (478)
..|+.|... ......-|+.|+..-. ...|+.|+-.=..-...|+.|...
T Consensus 2 ~~Cp~Cg~~---n~~~akFC~~CG~~l~------~~~Cp~CG~~~~~~~~fC~~CG~~ 50 (645)
T PRK14559 2 LICPQCQFE---NPNNNRFCQKCGTSLT------HKPCPQCGTEVPVDEAHCPNCGAE 50 (645)
T ss_pred CcCCCCCCc---CCCCCccccccCCCCC------CCcCCCCCCCCCcccccccccCCc
Confidence 468888654 2233467999954331 246888877644446789999876
No 170
>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional
Probab=25.67 E-value=54 Score=23.02 Aligned_cols=7 Identities=29% Similarity=0.914 Sum_probs=3.4
Q ss_pred ccCCCcC
Q 011767 265 STCSTCK 271 (478)
Q Consensus 265 ~~C~~C~ 271 (478)
.+|+.|+
T Consensus 22 ~~Cp~CG 28 (46)
T PRK00398 22 VRCPYCG 28 (46)
T ss_pred eECCCCC
Confidence 4455554
No 171
>PRK12380 hydrogenase nickel incorporation protein HybF; Provisional
Probab=24.87 E-value=57 Score=27.89 Aligned_cols=45 Identities=22% Similarity=0.327 Sum_probs=0.0
Q ss_pred hccCccccc-cccceeccCCCCCCCccCCCcccccCCcccccEEEcC
Q 011767 216 AAKGCTKHV-SFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP 261 (478)
Q Consensus 216 ~~~G~~k~v-~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~ 261 (478)
.+.|+...+ .++....|..|............ ||.|++.......
T Consensus 56 ~~egA~L~I~~vp~~~~C~~Cg~~~~~~~~~~~-CP~Cgs~~~~i~~ 101 (113)
T PRK12380 56 VAQGCDLHIVYKPAQAWCWDCSQVVEIHQHDAQ-CPHCHGERLRVDT 101 (113)
T ss_pred ccCCCEEEEEeeCcEEEcccCCCEEecCCcCcc-CcCCCCCCcEEcc
No 172
>PRK11032 hypothetical protein; Provisional
Probab=24.56 E-value=68 Score=29.33 Aligned_cols=16 Identities=6% Similarity=0.204 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHhCCC
Q 011767 98 EIKKAFHMLAKQYHPD 113 (478)
Q Consensus 98 eIk~ayr~la~~~HPD 113 (478)
.++++|.++....+-.
T Consensus 3 k~~~~Y~~ll~~v~~~ 18 (160)
T PRK11032 3 KVAQYYRELVASLTER 18 (160)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 4677787777555433
No 173
>KOG4782 consensus Predicted membrane protein [Function unknown]
Probab=24.44 E-value=1.5e+02 Score=24.49 Aligned_cols=42 Identities=12% Similarity=0.065 Sum_probs=27.3
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCccchhHHHHHHHHhcCc--chhh---hhhHHHHHHH
Q 011767 417 ALNERQRAILEEFAEEEINNENNTSAEENWWQRIVERVRAP--KFML---ELSLFLLILL 471 (478)
Q Consensus 417 ~ls~~q~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~ 471 (478)
.|+++|+.-.+++. ...|++|+|..+.- |-+- -+.++|-||.
T Consensus 29 dL~peQ~h~akQaE-------------~an~ekV~~~~aknykN~is~a~i~alViaIY~ 75 (108)
T KOG4782|consen 29 DLPPEQKHFAKQAE-------------KANQEKVKEIFAKNYKNHISFAGIGALVIAIYG 75 (108)
T ss_pred hCChHHHHHHHHHH-------------HHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhh
Confidence 58999988887764 35699999976554 4333 3344444543
No 174
>COG3058 FdhE Uncharacterized protein involved in formate dehydrogenase formation [Posttranslational modification, protein turnover, chaperones]
Probab=23.29 E-value=15 Score=36.33 Aligned_cols=57 Identities=18% Similarity=0.395 Sum_probs=31.7
Q ss_pred cceeccCCCCCCC---------ccCCCcccccCCcccccEEEcCCccccCCCcCCceEEe-------------eeccccc
Q 011767 227 DAFVPCDSCHGRG---------FPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRII-------------KDHCMTC 284 (478)
Q Consensus 227 ~~~~~C~~C~G~G---------~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i-------------~~~C~~C 284 (478)
.....|+.|.+.- ...+.+.-.|+.|--.=.. .+.+|..|+.++..- ...|.+|
T Consensus 183 e~~~~CPvCGS~PvaSmV~~g~~~~GlRYL~CslC~teW~~----VR~KC~nC~~t~~l~y~sl~s~E~A~vkAEtC~~C 258 (308)
T COG3058 183 ESRQYCPVCGSMPVASMVQIGETEQGLRYLHCSLCETEWHY----VRVKCSNCEQSKKLHYWSLESSELAAVKAETCGDC 258 (308)
T ss_pred cccccCCCcCCCCcceeeeecCccccchhhhhhhHHHHHHH----HHHHhccccccCCccceeccchhhhHhhhhcCCcH
Confidence 4556788886532 2233444556555332111 267788888777531 2577777
Q ss_pred cCC
Q 011767 285 KGS 287 (478)
Q Consensus 285 ~G~ 287 (478)
++-
T Consensus 259 ~sY 261 (308)
T COG3058 259 NSY 261 (308)
T ss_pred HHH
Confidence 754
No 175
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=23.02 E-value=76 Score=31.27 Aligned_cols=31 Identities=26% Similarity=0.373 Sum_probs=25.5
Q ss_pred ecccCCHHHHhcC-CeEEEecCCCEE-EEEeCC
Q 011767 349 VDSNISFTQAILG-GKVDVPTLSGKV-QVKIPK 379 (478)
Q Consensus 349 ~~~~Isl~eAl~G-~~~~i~tldG~~-~v~ip~ 379 (478)
++.+|-++||+.| +...|++.|+.+ .+.|.|
T Consensus 18 YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTp 50 (311)
T KOG0315|consen 18 YDHTIRFWQALTGICSRTIQHPDSQVNRLEITP 50 (311)
T ss_pred CcceeeeeehhcCeEEEEEecCccceeeEEEcC
Confidence 3567889999999 789999999986 477755
No 176
>COG3635 Predicted phosphoglycerate mutase, AP superfamily [Carbohydrate transport and metabolism]
Probab=22.62 E-value=2.8e+02 Score=29.00 Aligned_cols=94 Identities=22% Similarity=0.381 Sum_probs=57.6
Q ss_pred EEecCcCCCCC------------EEEECCCCCCCC----CCCCCccEEEEEEEec-CC----CcccCCCceeecccCCHH
Q 011767 298 VTIPAGVDSGD------------TIRVPEAGNAGG----RGRQHGNLFIKLKVAD-DP----IFSRDGADVYVDSNISFT 356 (478)
Q Consensus 298 V~Ip~G~~~G~------------~i~l~g~G~~~~----~g~~~GDL~v~i~v~~-h~----~f~R~G~DL~~~~~Isl~ 356 (478)
-.|+||+++|. ...+.|-|-... -...+||+.|+-+... .. .--|....+-.+..=.+.
T Consensus 49 ~~i~pGi~pGSd~ahLsl~GYDP~~yy~GRGplEAlG~Gv~l~~gDvAfR~NfaTvd~~~~vivDRRAGRi~~ee~~~l~ 128 (408)
T COG3635 49 DPIKPGIRPGSDTAHLSLFGYDPYKYYTGRGPLEALGAGVELKPGDVAFRANFATVDEDGGVVVDRRAGRISTEEAEELA 128 (408)
T ss_pred cccCCCCCCCCCcceeeeeccCcceeecCCChHHHhcCCccccCCCEEEEeeeeEecCCCcEEEeccCCCCChhhHHHHH
Confidence 45777777774 223445442111 1235899999877654 22 223444444444455567
Q ss_pred HHhcCCeEEEecCCCEEEEEeCCCCCCCcEEEEcCCCccC
Q 011767 357 QAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAK 396 (478)
Q Consensus 357 eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~~i~g~G~p~ 396 (478)
++|.+..+++. +++.+-+++..--.++++|.|...
T Consensus 129 ~~l~~~~~e~~-----v~~~f~~g~~hR~vlV~rg~~~~d 163 (408)
T COG3635 129 DALNEEEVEIG-----VKVRFKAGVEHRAVLVLRGPGLSD 163 (408)
T ss_pred HHHhhhhcccc-----eEEEEEeccceEEEEEEecCCCcc
Confidence 77765554433 677778888888899999999883
No 177
>cd02641 R3H_Smubp-2_like R3H domain of Smubp-2_like proteins. Smubp-2_like proteins also contain a helicase_like and an AN1-like Zinc finger domain and have been shown to bind single-stranded DNA. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA.
Probab=22.55 E-value=1.1e+02 Score=22.93 Aligned_cols=23 Identities=35% Similarity=0.665 Sum_probs=20.6
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHh
Q 011767 411 RVNFPTALNERQRAILEEFAEEE 433 (478)
Q Consensus 411 ~V~~P~~ls~~q~~ll~~~~~~~ 433 (478)
.+.||.+||+.||..+-+++...
T Consensus 19 ~l~F~p~ls~~eR~~vH~lA~~~ 41 (60)
T cd02641 19 ELEFPPTLSSHDRLLVHELAEEL 41 (60)
T ss_pred cEECCCCCCHHHHHHHHHHHHHc
Confidence 47899999999999999999864
No 178
>PF14599 zinc_ribbon_6: Zinc-ribbon; PDB: 2K2D_A.
Probab=22.51 E-value=58 Score=24.81 Aligned_cols=25 Identities=24% Similarity=0.677 Sum_probs=8.1
Q ss_pred ccCCcccccEEEcCCccccCCCcCC
Q 011767 248 ICSTCRGIGRVTIPPFTSTCSTCKG 272 (478)
Q Consensus 248 ~C~~C~G~G~~~~~~~~~~C~~C~G 272 (478)
.|..|+.++.+..-.+..+|..|+.
T Consensus 32 lCNDC~~~s~v~fH~lg~KC~~C~S 56 (61)
T PF14599_consen 32 LCNDCNAKSEVPFHFLGHKCSHCGS 56 (61)
T ss_dssp EESSS--EEEEE--TT----TTTS-
T ss_pred ECCCCCCccceeeeHhhhcCCCCCC
Confidence 4555555554433334555666653
No 179
>cd06007 R3H_DEXH_helicase R3H domain of a group of proteins which also contain a DEXH-box helicase domain, and may function as ATP-dependent DNA or RNA helicases. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=22.47 E-value=1.2e+02 Score=22.75 Aligned_cols=25 Identities=20% Similarity=0.489 Sum_probs=21.6
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHh
Q 011767 409 RFRVNFPTALNERQRAILEEFAEEE 433 (478)
Q Consensus 409 ~~~V~~P~~ls~~q~~ll~~~~~~~ 433 (478)
.-...||..||+.+|..+-+++...
T Consensus 16 ~~~l~Fpp~ls~~eR~~vH~~a~~~ 40 (59)
T cd06007 16 NEEYEFPSSLTNHERAVIHRLCRKL 40 (59)
T ss_pred ccEEEcCCCCCHHHHHHHHHHHHHc
Confidence 3467899999999999999999764
No 180
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=21.70 E-value=1.4e+02 Score=26.06 Aligned_cols=55 Identities=20% Similarity=0.230 Sum_probs=38.9
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchh
Q 011767 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEK 140 (478)
Q Consensus 82 ~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~ 140 (478)
..--+||+|+...+.+||.+.|..|-....+.+.+.-- .=.+|-.|-|-|....+
T Consensus 59 qEa~qILnV~~~ln~eei~k~yehLFevNdkskGGSFY----LQSKVfRAkErld~El~ 113 (132)
T KOG3442|consen 59 QEAQQILNVKEPLNREEIEKRYEHLFEVNDKSKGGSFY----LQSKVFRAKERLDEELK 113 (132)
T ss_pred HHHhhHhCCCCCCCHHHHHHHHHHHHhccCcccCccee----ehHHHHHHHHHHHHHHH
Confidence 45578999999999999999999999888777765421 11245556666644333
No 181
>PF09297 zf-NADH-PPase: NADH pyrophosphatase zinc ribbon domain; InterPro: IPR015376 This domain has a zinc ribbon structure and is often found between two NUDIX domains.; GO: 0016787 hydrolase activity, 0046872 metal ion binding; PDB: 1VK6_A 2GB5_A.
Probab=21.63 E-value=64 Score=20.82 Aligned_cols=22 Identities=18% Similarity=0.658 Sum_probs=6.8
Q ss_pred cCCcccccEEEcCCccccCCCc
Q 011767 249 CSTCRGIGRVTIPPFTSTCSTC 270 (478)
Q Consensus 249 C~~C~G~G~~~~~~~~~~C~~C 270 (478)
|+.|.+.=......+...|+.|
T Consensus 6 C~~CG~~t~~~~~g~~r~C~~C 27 (32)
T PF09297_consen 6 CGRCGAPTKPAPGGWARRCPSC 27 (32)
T ss_dssp -TTT--BEEE-SSSS-EEESSS
T ss_pred cCcCCccccCCCCcCEeECCCC
Confidence 4444443333222234444444
No 182
>PF13719 zinc_ribbon_5: zinc-ribbon domain
Probab=21.31 E-value=47 Score=22.37 Aligned_cols=6 Identities=33% Similarity=1.359 Sum_probs=2.6
Q ss_pred ccCCCC
Q 011767 231 PCDSCH 236 (478)
Q Consensus 231 ~C~~C~ 236 (478)
.|+.|+
T Consensus 4 ~CP~C~ 9 (37)
T PF13719_consen 4 TCPNCQ 9 (37)
T ss_pred ECCCCC
Confidence 344444
No 183
>COG5435 Uncharacterized conserved protein [Function unknown]
Probab=20.91 E-value=2.2e+02 Score=25.62 Aligned_cols=33 Identities=18% Similarity=0.378 Sum_probs=29.8
Q ss_pred CCCcEEEEEEEeCCCCCCHHHHHHHHHHHHHhc
Q 011767 402 DHGDQYVRFRVNFPTALNERQRAILEEFAEEEI 434 (478)
Q Consensus 402 ~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~~~~ 434 (478)
.+|+-++.|....|..+++.|+.+++++...-.
T Consensus 108 ~~g~~vLifT~Tt~~~ftp~q~~~~~~~I~Sf~ 140 (147)
T COG5435 108 ERGDTVLIFTLTTPGEFTPSQKKAWEQVIQSFV 140 (147)
T ss_pred ccCCeEEEEEecCCCCCCHHHHHHHHHHHHhcC
Confidence 469999999999999999999999999987643
No 184
>PF13901 DUF4206: Domain of unknown function (DUF4206)
Probab=20.73 E-value=38 Score=32.13 Aligned_cols=46 Identities=35% Similarity=0.873 Sum_probs=28.6
Q ss_pred ccCCCCCCCccCCCcccccCCcccccEEEcCCc----cccCCCcCCceEE---eeecccccc
Q 011767 231 PCDSCHGRGFPADAKTKICSTCRGIGRVTIPPF----TSTCSTCKGLGRI---IKDHCMTCK 285 (478)
Q Consensus 231 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~----~~~C~~C~G~G~~---i~~~C~~C~ 285 (478)
.|..|.+.|+ .|.-|+....+ -|| ...|+.|+.-=.. .+..|+.|.
T Consensus 144 ~C~lC~~kGf-------iCe~C~~~~~I--fPF~~~~~~~C~~C~~v~H~~C~~~~~CpkC~ 196 (202)
T PF13901_consen 144 SCELCQQKGF-------ICEICNSDDII--FPFQIDTTVRCPKCKSVFHKSCFRKKSCPKCA 196 (202)
T ss_pred HhHHHHhCCC-------CCccCCCCCCC--CCCCCCCeeeCCcCccccchhhcCCCCCCCcH
Confidence 7999999986 68899877433 234 3456666432211 235677775
No 185
>TIGR00100 hypA hydrogenase nickel insertion protein HypA. In Hpylori, hypA mutant abolished hydrogenase activity and decrease in urease activity. Nickel supplementation in media restored urease activity and partial hydrogenase activity. HypA probably involved in inserting Ni in enzymes.
Probab=20.35 E-value=69 Score=27.45 Aligned_cols=9 Identities=22% Similarity=0.803 Sum_probs=5.1
Q ss_pred ceeccCCCC
Q 011767 228 AFVPCDSCH 236 (478)
Q Consensus 228 ~~~~C~~C~ 236 (478)
....|..|.
T Consensus 69 ~~~~C~~Cg 77 (115)
T TIGR00100 69 VECECEDCS 77 (115)
T ss_pred cEEEcccCC
Confidence 345566665
No 186
>PHA02576 3 tail completion and sheath stabilizer protein; Provisional
Probab=20.05 E-value=1.6e+02 Score=27.43 Aligned_cols=53 Identities=28% Similarity=0.372 Sum_probs=28.3
Q ss_pred CCeEEEecCCCEE-------EEEeCCCCCCCcEEEEcCCCc---cCCCCCCCCCcEEEEEEEe
Q 011767 361 GGKVDVPTLSGKV-------QVKIPKGVQPGQLLVLRGKGL---AKNGLFLDHGDQYVRFRVN 413 (478)
Q Consensus 361 G~~~~i~tldG~~-------~v~ip~g~~~g~~~~i~g~G~---p~~~~~~~~GdL~v~~~V~ 413 (478)
-+.+.||..++.. .+.||...-+...+-..|.|+ +..|...+.++|.|+|.|+
T Consensus 12 nf~~~ipd~~~~~~~~~~~q~a~iP~i~i~~~evP~~~~g~~~~~ipg~~~efDpl~i~FivD 74 (177)
T PHA02576 12 NFRLDIPDSNGTKGFTLNVQGVTIPGIRIPPTDIPLGPQGLARAKIPGSTVEFDPLIVRFLVD 74 (177)
T ss_pred ceEEEcCCCCceeEEEEEeeeccCCcccccceeccCCCCcceeEecCCCCeecCCEEEEEEEc
Confidence 4556666665531 234454333333334444443 2334444579999999886
Done!