Query 011767
Match_columns 478
No_of_seqs 400 out of 2880
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 14:54:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011767.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011767hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lz8_A Putative chaperone DNAJ 100.0 1.5E-63 5.1E-68 502.6 19.3 284 79-431 25-315 (329)
2 1nlt_A Protein YDJ1, mitochond 100.0 3.2E-56 1.1E-60 433.5 18.2 226 199-427 8-248 (248)
3 3agx_A DNAJ homolog subfamily 100.0 1.6E-44 5.5E-49 335.1 18.7 177 202-430 2-179 (181)
4 2q2g_A HSP40 protein, heat sho 100.0 2E-43 6.8E-48 327.6 19.3 177 201-430 2-179 (180)
5 1c3g_A Heat shock protein 40; 100.0 5E-41 1.7E-45 308.7 15.3 169 203-427 1-170 (170)
6 3i38_A Putative chaperone DNAJ 99.9 2.1E-26 7.1E-31 195.7 11.0 96 335-433 2-97 (109)
7 1xao_A YDJ1, mitochondrial pro 99.9 5.6E-24 1.9E-28 184.2 9.8 94 339-433 1-99 (121)
8 1bq0_A DNAJ, HSP40; chaperone, 99.8 5.1E-22 1.7E-26 167.2 5.5 73 81-153 2-74 (103)
9 2dn9_A DNAJ homolog subfamily 99.8 3.5E-21 1.2E-25 154.2 8.0 73 79-151 4-76 (79)
10 1hdj_A Human HSP40, HDJ-1; mol 99.8 9.5E-21 3.3E-25 150.9 7.5 71 81-152 2-72 (77)
11 2ej7_A HCG3 gene; HCG3 protein 99.8 1.7E-20 5.9E-25 151.2 7.7 73 79-151 6-79 (82)
12 2ctr_A DNAJ homolog subfamily 99.8 1.5E-20 5.3E-25 153.6 7.1 72 79-151 4-75 (88)
13 2ctp_A DNAJ homolog subfamily 99.8 2E-20 7E-25 149.3 7.0 72 79-151 4-75 (78)
14 2yua_A Williams-beuren syndrom 99.8 1.6E-20 5.6E-25 156.8 6.5 71 78-148 13-83 (99)
15 2dmx_A DNAJ homolog subfamily 99.8 3.5E-20 1.2E-24 152.7 8.3 74 79-152 6-80 (92)
16 2ctq_A DNAJ homolog subfamily 99.8 3.5E-20 1.2E-24 158.3 6.9 73 79-151 17-89 (112)
17 2cug_A Mkiaa0962 protein; DNAJ 99.8 5.4E-20 1.8E-24 150.3 7.5 71 80-151 15-85 (88)
18 2och_A Hypothetical protein DN 99.8 7.2E-20 2.5E-24 144.3 6.8 67 80-149 6-72 (73)
19 2ctw_A DNAJ homolog subfamily 99.8 5.8E-20 2E-24 156.1 6.5 73 79-151 14-86 (109)
20 2o37_A Protein SIS1; HSP40, J- 99.8 5.5E-20 1.9E-24 151.5 5.4 71 79-152 5-75 (92)
21 2lgw_A DNAJ homolog subfamily 99.8 9.8E-20 3.3E-24 151.9 6.3 72 82-153 2-74 (99)
22 1wjz_A 1700030A21RIK protein; 99.8 1.3E-19 4.4E-24 149.9 6.2 71 79-149 13-89 (94)
23 2ctt_A DNAJ homolog subfamily 99.8 2.7E-20 9.1E-25 156.9 2.1 99 202-300 1-103 (104)
24 2qsa_A DNAJ homolog DNJ-2; J-d 99.7 1.4E-18 4.6E-23 147.7 4.7 70 80-149 13-86 (109)
25 3apq_A DNAJ homolog subfamily 99.7 4.5E-18 1.5E-22 160.4 6.9 72 82-153 2-73 (210)
26 2ys8_A RAB-related GTP-binding 99.7 9.5E-18 3.3E-22 137.5 6.2 62 81-143 26-87 (90)
27 2l6l_A DNAJ homolog subfamily 99.7 1E-17 3.4E-22 151.3 6.5 70 79-148 7-82 (155)
28 3bvo_A CO-chaperone protein HS 99.7 1.3E-17 4.5E-22 157.0 7.3 101 42-148 9-116 (207)
29 1iur_A KIAA0730 protein; DNAJ 99.7 8.7E-18 3E-22 136.8 2.9 69 75-143 9-78 (88)
30 1faf_A Large T antigen; J doma 99.7 4.3E-17 1.5E-21 130.2 5.0 62 82-148 11-74 (79)
31 1gh6_A Large T antigen; tumor 99.7 1.1E-17 3.9E-22 142.7 1.2 64 82-149 8-73 (114)
32 3hho_A CO-chaperone protein HS 99.7 6.8E-17 2.3E-21 148.4 6.0 68 81-148 3-77 (174)
33 2pf4_E Small T antigen; PP2A, 99.6 2.1E-17 7.1E-22 150.6 1.1 64 82-149 11-76 (174)
34 1n4c_A Auxilin; four helix bun 99.6 1.5E-16 5.1E-21 145.8 5.0 66 79-144 114-182 (182)
35 1fpo_A HSC20, chaperone protei 99.6 1.6E-16 5.4E-21 145.4 5.1 67 83-149 2-75 (171)
36 2qwo_B Putative tyrosine-prote 99.6 2.5E-16 8.5E-21 128.7 3.8 56 82-137 33-91 (92)
37 2guz_A Mitochondrial import in 99.6 7.5E-16 2.5E-20 120.5 4.0 59 79-141 11-70 (71)
38 3uo3_A J-type CO-chaperone JAC 99.6 9.8E-16 3.3E-20 141.3 3.9 66 80-148 9-81 (181)
39 3ag7_A Putative uncharacterize 99.6 8.4E-16 2.9E-20 129.4 2.8 60 79-139 38-104 (106)
40 3apo_A DNAJ homolog subfamily 99.5 1.2E-15 4.1E-20 170.6 0.9 76 79-154 18-93 (780)
41 1exk_A DNAJ protein; extended 99.4 5E-13 1.7E-17 106.5 5.2 74 219-292 1-78 (79)
42 1nlt_A Protein YDJ1, mitochond 99.2 1.5E-11 5.2E-16 119.0 9.8 108 229-338 54-235 (248)
43 2y4t_A DNAJ homolog subfamily 98.9 1.4E-09 4.7E-14 111.0 5.2 65 82-146 382-449 (450)
44 2guz_B Mitochondrial import in 98.7 1.4E-08 4.9E-13 77.2 5.1 52 83-138 5-59 (65)
45 3i38_A Putative chaperone DNAJ 98.7 1.2E-08 4.2E-13 86.1 4.2 75 200-341 9-83 (109)
46 1xao_A YDJ1, mitochondrial pro 98.6 1.8E-08 6.3E-13 86.6 4.4 76 200-339 4-81 (121)
47 2q2g_A HSP40 protein, heat sho 98.6 8E-08 2.7E-12 88.3 7.0 72 344-417 3-87 (180)
48 3agx_A DNAJ homolog subfamily 98.5 1.9E-07 6.3E-12 86.0 7.4 73 344-418 2-88 (181)
49 3lz8_A Putative chaperone DNAJ 98.5 1.1E-07 3.9E-12 95.4 6.2 74 342-416 138-225 (329)
50 1c3g_A Heat shock protein 40; 98.5 2.1E-07 7.1E-12 84.8 7.0 71 345-417 1-81 (170)
51 1exk_A DNAJ protein; extended 97.6 2.3E-05 8E-10 61.7 2.3 46 228-277 27-77 (79)
52 3lcz_A YCZA, inhibitor of trap 97.6 2.3E-05 7.8E-10 56.9 2.0 30 263-292 8-37 (53)
53 2ctt_A DNAJ homolog subfamily 97.5 5.5E-05 1.9E-09 62.9 3.2 48 228-279 44-96 (104)
54 3pmq_A Decaheme cytochrome C M 97.4 1.8E-05 6.2E-10 85.7 -0.7 51 206-256 168-221 (669)
55 2bx9_A Anti-trap, AT, tryptoph 96.9 0.0004 1.4E-08 50.3 2.2 24 266-289 11-34 (53)
56 3lcz_A YCZA, inhibitor of trap 96.8 0.00055 1.9E-08 49.6 2.6 28 247-278 10-37 (53)
57 2bx9_A Anti-trap, AT, tryptoph 96.7 0.00078 2.7E-08 48.8 2.6 13 265-277 24-36 (53)
58 2pzi_A Probable serine/threoni 84.8 0.51 1.7E-05 51.3 3.6 47 80-134 627-675 (681)
59 2aus_D NOP10, ribosome biogene 29.7 28 0.00094 25.4 2.1 22 246-273 5-26 (60)
60 2apo_B Ribosome biogenesis pro 29.2 31 0.0011 25.1 2.3 10 264-273 18-27 (60)
61 1ltl_A DNA replication initiat 27.0 1.8E+02 0.0062 27.4 8.1 16 417-432 255-270 (279)
62 1msz_A DNA-binding protein smu 26.1 38 0.0013 26.5 2.5 24 411-434 35-58 (86)
63 3zxf_A Galectin-7; sugar bindi 25.5 1.1E+02 0.0039 25.5 5.7 43 374-416 9-59 (138)
64 2lli_A Protein AIR2; RNA surve 24.1 33 0.0011 28.3 2.0 9 232-240 7-15 (124)
65 2b7e_A PRE-mRNA processing pro 24.0 61 0.0021 23.5 3.0 49 97-148 3-56 (59)
66 2cqn_A Formin-binding protein 22.6 1E+02 0.0036 23.3 4.4 53 95-148 7-62 (77)
67 2qkd_A Zinc finger protein ZPR 22.2 30 0.001 35.0 1.5 14 264-277 249-262 (404)
68 3nyb_B Protein AIR2; polya RNA 21.2 64 0.0022 24.9 2.9 50 228-277 4-59 (83)
69 2r0h_A CGL3 lectin; galectin-r 20.9 1E+02 0.0034 27.1 4.5 43 374-416 10-67 (164)
70 2wkk_A Galectin-2; sugar-bindi 20.7 1.3E+02 0.0045 25.7 5.2 43 374-416 10-58 (150)
71 1y0p_A Fumarate reductase flav 20.5 9.2 0.00031 40.3 -2.8 57 231-287 13-88 (571)
No 1
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=1.5e-63 Score=502.61 Aligned_cols=284 Identities=29% Similarity=0.553 Sum_probs=159.9
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCCcccC
Q 011767 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYS 158 (478)
Q Consensus 79 ~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~~~~~ 158 (478)
+..+|||+||||+++|+.+|||+|||+||++||||++++ ++|+++|++|++||++|+||.+|+.||+++..+... +++
T Consensus 25 m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~-~~~ 102 (329)
T 3lz8_A 25 MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE-NDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDP-GFG 102 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC-hHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCC-Ccc
Confidence 345799999999999999999999999999999999975 578999999999999999999999999984322110 000
Q ss_pred CCCCCCccccCCCCCccccccccccccccchhcccccC-------ccccCCCceEEEEeeeehhhccCccccccccceec
Q 011767 159 AGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (478)
Q Consensus 159 ~~~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~F~~-------~~~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~ 231 (478)
.+|.+ .+++|. ..+|.++|+++|++ ....+++|+.++|.|||+|+|.|+++++.+++.+.
T Consensus 103 ----~~~~~--~~~~f~-------~~~f~diF~~~Fg~~g~~~~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~ 169 (329)
T 3lz8_A 103 ----RQRQT--HEQSYS-------QQDFDDIFSSMFGQQAHQRRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVY 169 (329)
T ss_dssp -----------------------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEEC
T ss_pred ----ccccc--ccCCcC-------CCchhhhhHhhhcCcCCCCCCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEee
Confidence 01110 011111 11355666666653 12457899999999999999999999999887653
Q ss_pred cCCCCCCCccCCCcccccCCcccccEEEcCCccccCCCcCCceEEeeeccccccCCceEeceEEEEEEecCcCCCCCEEE
Q 011767 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR 311 (478)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~~k~~~V~Ip~G~~~G~~i~ 311 (478)
| | .|.+ .+...++++|+||||+++|++|+
T Consensus 170 ~----g-----------------~G~v------------------------------~~~~~~~l~V~IP~Gv~~G~~Ir 198 (329)
T 3lz8_A 170 N----V-----------------FGMI------------------------------ESETPKTLNVKIPAGVVDGQRIR 198 (329)
T ss_dssp C----S-----------------CC-C------------------------------CEEEEEEEEEEECTTCCTTCEEE
T ss_pred c----C-----------------CeEE------------------------------EEecceEEEEeCCCCCCCCCEEE
Confidence 2 1 1111 12335689999999999999999
Q ss_pred ECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCEEEEEeCCCCCCCcEEEEcC
Q 011767 312 VPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRG 391 (478)
Q Consensus 312 l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~~i~g 391 (478)
|+|+|+++..|+.+|||||+|+|+||+.|+|+|+||+++++|+++||++|++++|+||||++.|+||++++||++++|+|
T Consensus 199 l~G~G~~g~~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~v~l~ip~gt~~g~~~rl~G 278 (329)
T 3lz8_A 199 LKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKG 278 (329)
T ss_dssp ESSCSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTTCCTTCEEEETT
T ss_pred EcccccCCCCCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCCEEEEECCCCCCCCEEEEcC
Confidence 99999998778889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHHH
Q 011767 392 KGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAE 431 (478)
Q Consensus 392 ~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~~ 431 (478)
+|||..+ .+|||||+|+|+||+.||++|+++|++|++
T Consensus 279 ~GmP~~~---~rGDL~v~~~V~~P~~l~~~q~~~l~~~~~ 315 (329)
T 3lz8_A 279 KGLVSKT---HTGDLFAVIKIVMPTKPDEKARELWQQLAA 315 (329)
T ss_dssp CSCBCSS---CBCCEEEEEEECCCSSCCHHHHHHHHHHHH
T ss_pred CCCCCCC---CCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 9999763 479999999999999999999999999988
No 2
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=100.00 E-value=3.2e-56 Score=433.47 Aligned_cols=226 Identities=29% Similarity=0.540 Sum_probs=200.8
Q ss_pred ccCCCceEEEEeeeehhhccCccccccccceeccCCCCCCCccCCCcccccCCcccccEEEcC--------CccccCCCc
Q 011767 199 SHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTC 270 (478)
Q Consensus 199 ~~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C 270 (478)
+.+++|+++.|.|||+|+|+|+++++.+++.+.|+.|+|+|+..+. ..+|+.|+|+|.+... .++.+|+.|
T Consensus 8 ~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~-~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C 86 (248)
T 1nlt_A 8 PQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVC 86 (248)
T ss_dssp CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTT-CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTC
T ss_pred CCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCC-CccCCCCCCCcEEEEEEecCceEEEEEEcCCCC
Confidence 4578999999999999999999999999999999999999999887 4899999999976421 257899999
Q ss_pred CCceEEe--eeccccccCCceEeceEEEEEEecCcCCCCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCcee
Q 011767 271 KGLGRII--KDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVY 348 (478)
Q Consensus 271 ~G~G~~i--~~~C~~C~G~G~~~~~k~~~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~ 348 (478)
+|+|+++ +++|..|+|.|++.+.++++|+||||+.+|++|+|+|+|++++ ++.+|||||+|+++||+.|+|+|+|||
T Consensus 87 ~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~-~g~~GDl~v~i~v~~h~~F~R~G~DL~ 165 (248)
T 1nlt_A 87 HGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAP-DVIPGDVVFIVSERPHKSFKRDGDDLV 165 (248)
T ss_dssp SSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCT-TCBCCCEEEEEEECCCSSCEEETTEEE
T ss_pred CCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCC-CCCcceEEEEEEEecCccceeeCCEEE
Confidence 9999999 9999999999999999999999999999999999999999975 568999999999999999999999999
Q ss_pred ecccCCHHHHhcCCeEEEecCCCE-EEEEeCCC--CCCCcEEEEcCCCccCCCCCCCCCcEEEEEEEeCCCC--CCHHHH
Q 011767 349 VDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG--VQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTA--LNERQR 423 (478)
Q Consensus 349 ~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g--~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~--ls~~q~ 423 (478)
++++|+|+||++|++++|+||||+ +.|+||++ ++||++++|+|+|||..+.. .+|||||+|+|+||++ ||++|+
T Consensus 166 ~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~q~ 244 (248)
T 1nlt_A 166 YEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEENL 244 (248)
T ss_dssp EEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC---------
T ss_pred EEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHHHH
Confidence 999999999999999999999995 89999998 99999999999999976433 4799999999999999 999999
Q ss_pred HHHH
Q 011767 424 AILE 427 (478)
Q Consensus 424 ~ll~ 427 (478)
++|+
T Consensus 245 ~~l~ 248 (248)
T 1nlt_A 245 KKLE 248 (248)
T ss_dssp ----
T ss_pred HhhC
Confidence 9885
No 3
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=100.00 E-value=1.6e-44 Score=335.12 Aligned_cols=177 Identities=28% Similarity=0.490 Sum_probs=158.2
Q ss_pred CCceEEEEeeeehhhccCccccccccceeccCCCCCCCccCCCcccccCCcccccEEEcCCccccCCCcCCceEEeeecc
Q 011767 202 APDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHC 281 (478)
Q Consensus 202 g~di~~~l~ltlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C 281 (478)
++|++++|.|||+|+|.|+++++.+++ +|
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~---------------------------------------------------~c 30 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISH---------------------------------------------------KR 30 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEE---------------------------------------------------EE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEec---------------------------------------------------cc
Confidence 468999999999999999999987532 34
Q ss_pred ccccCCceEeceEEEEEEecCcCCCCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcC
Q 011767 282 MTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILG 361 (478)
Q Consensus 282 ~~C~G~G~~~~~k~~~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G 361 (478)
..|+|.|++.+.++++|+||||+.+|++|+|+|+|++++ ++.+|||||+|+++||+.|+|+|+||+++++||+.+|++|
T Consensus 31 ~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~-~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAllG 109 (181)
T 3agx_A 31 LNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTS-NNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCG 109 (181)
T ss_dssp ECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCS-SSCCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHC
T ss_pred CCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCC-CCCcccEEEEEEEeccccceeeCCcEEEEEEcCHHHHhCC
Confidence 455556667788999999999999999999999999976 6789999999999999999999999999999999999999
Q ss_pred CeEEEecCCCE-EEEEeCCCCCCCcEEEEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHH
Q 011767 362 GKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFA 430 (478)
Q Consensus 362 ~~~~i~tldG~-~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~ 430 (478)
++++|+||||+ +.|++|+++++|++++|+|+|||..+....+|||||+|+|+||+.||++|+++|++++
T Consensus 110 ~~i~v~tldG~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~~q~~~l~~~~ 179 (181)
T 3agx_A 110 CTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 179 (181)
T ss_dssp EEEEEECTTSCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCHHHHHHHHHHS
T ss_pred CEEEeECCCCCEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhc
Confidence 99999999995 8999999999999999999999976433457999999999999999999999999987
No 4
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2e-43 Score=327.61 Aligned_cols=177 Identities=21% Similarity=0.356 Sum_probs=162.4
Q ss_pred CCCceEEEEeeeehhhccCccccccccceeccCCCCCCCccCCCcccccCCcccccEEEcCCccccCCCcCCceEEeeec
Q 011767 201 FAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDH 280 (478)
Q Consensus 201 ~g~di~~~l~ltlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~ 280 (478)
+++|+++.|.|||+|+|+|+++++.+++.+.|+.
T Consensus 2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~---------------------------------------------- 35 (180)
T 2q2g_A 2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH---------------------------------------------- 35 (180)
T ss_dssp --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETT----------------------------------------------
T ss_pred CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCC----------------------------------------------
Confidence 4789999999999999999999999998887631
Q ss_pred cccccCCceEeceEEEEEEecCcCCCCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhc
Q 011767 281 CMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAIL 360 (478)
Q Consensus 281 C~~C~G~G~~~~~k~~~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~ 360 (478)
|++.+.++++|+||||+++|++|+|+|+|+++.+|+.+|||||+|+++||+.|+|+|+||+++++|++.||++
T Consensus 36 -------g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAll 108 (180)
T 2q2g_A 36 -------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKVTIPLVRALT 108 (180)
T ss_dssp -------EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHH
T ss_pred -------ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEEEEcCHHHHhC
Confidence 3456778999999999999999999999999667889999999999999999999999999999999999999
Q ss_pred CCeEEEecCCCE-EEEEeCCCCCCCcEEEEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHHHH
Q 011767 361 GGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFA 430 (478)
Q Consensus 361 G~~~~i~tldG~-~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~~~~ 430 (478)
|++++|+||||+ +.|++|+++++|++++|+|+|||..+....+|||||+|+|+||++||++|+++|++++
T Consensus 109 G~~i~v~tldG~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~~~ 179 (180)
T 2q2g_A 109 GFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIKEAL 179 (180)
T ss_dssp CEEEEEECTTCCEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCHHHHHHHHHHC
T ss_pred CCEEEeeCCCCCEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhc
Confidence 999999999995 8999999999999999999999976443457999999999999999999999999986
No 5
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=100.00 E-value=5e-41 Score=308.72 Aligned_cols=169 Identities=22% Similarity=0.395 Sum_probs=153.5
Q ss_pred CceEEEEeeeehhhccCccccccccceeccCCCCCCCccCCCcccccCCcccccEEEcCCccccCCCcCCceEEeeeccc
Q 011767 203 PDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCM 282 (478)
Q Consensus 203 ~di~~~l~ltlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~ 282 (478)
+|+++.+.|||+|+|+|+++++.+++.. +
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~~----~----------------------------------------------- 29 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG----P----------------------------------------------- 29 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEEE----T-----------------------------------------------
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEec----C-----------------------------------------------
Confidence 4789999999999999999999987541 0
Q ss_pred cccCCceEeceEEEEEEecCcCCCCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcccCCCceeecccCCHHHHhcCC
Q 011767 283 TCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGG 362 (478)
Q Consensus 283 ~C~G~G~~~~~k~~~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~ 362 (478)
.|.+ +.++++|+||||+.+|++|+|+|+|+++.+|+.+|||||+|+++||+.|+|+|+||+++++|++++|++|+
T Consensus 30 ----~G~~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~ 104 (170)
T 1c3g_A 30 ----HGAS-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGF 104 (170)
T ss_dssp ----TTEE-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEECCBHHHHHHCE
T ss_pred ----CCcE-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEEcCHHHHhCCC
Confidence 1223 56899999999999999999999999877888999999999999999999999999999999999999999
Q ss_pred eEEEecCCCE-EEEEeCCCCCCCcEEEEcCCCccCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHH
Q 011767 363 KVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILE 427 (478)
Q Consensus 363 ~~~i~tldG~-~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q~~ll~ 427 (478)
+++|+||||+ +.|++|+++++|++++|+|+|||..+....+|||||+|+|+||++||++|+++|+
T Consensus 105 ~~~v~tldG~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~ 170 (170)
T 1c3g_A 105 SKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID 170 (170)
T ss_dssp EEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTHHHHTC
T ss_pred eEEeeCCCCCEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCCCCHHHHHhhC
Confidence 9999999995 8999999999999999999999976444457999999999999999999999874
No 6
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.93 E-value=2.1e-26 Score=195.67 Aligned_cols=96 Identities=31% Similarity=0.561 Sum_probs=90.3
Q ss_pred ecCCCcccCCCceeecccCCHHHHhcCCeEEEecCCCEEEEEeCCCCCCCcEEEEcCCCccCCCCCCCCCcEEEEEEEeC
Q 011767 335 ADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNF 414 (478)
Q Consensus 335 ~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~ 414 (478)
+||+.|+|+|+||+++++|++.||++|++++|+|+||.+.|+||+|+++|++++|+|+|||..+ .+|||||+|+|+|
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~~~v~ip~g~~~G~~~rl~G~G~p~~~---~~GDL~v~~~V~~ 78 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSKT---HTGDLFAVIKIVM 78 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTTCCTTCEEEETTCSCBCSS---CBCCEEEEEEECC
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCCEEEeeCCCcCcCeEEEECCccCCCCC---CCcCEEEEEEEEC
Confidence 6899999999999999999999999999999999999999999999999999999999999843 4799999999999
Q ss_pred CCCCCHHHHHHHHHHHHHh
Q 011767 415 PTALNERQRAILEEFAEEE 433 (478)
Q Consensus 415 P~~ls~~q~~ll~~~~~~~ 433 (478)
|++||++|+++|+++++..
T Consensus 79 P~~Ls~~q~~~l~~l~~~~ 97 (109)
T 3i38_A 79 PTKPDEKARELWQQLAAAE 97 (109)
T ss_dssp CSSCCHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHhhc
Confidence 9999999999999999864
No 7
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.90 E-value=5.6e-24 Score=184.20 Aligned_cols=94 Identities=31% Similarity=0.547 Sum_probs=84.5
Q ss_pred CcccCCCceeecccCCHHHHhcCCeEEEecCCCE-EEEEeCCC--CCCCcEEEEcCCCccCCCCCCCCCcEEEEEEEeCC
Q 011767 339 IFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG--VQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFP 415 (478)
Q Consensus 339 ~f~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g--~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P 415 (478)
.|+|+|+||+++++|++.+|++|++++|+||||+ +.|+||+| +++|++++|+|+|||..+.. .+|||||+|+|+||
T Consensus 1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P 79 (121)
T 1xao_A 1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP 79 (121)
T ss_dssp CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence 4899999999999999999999999999999996 89999999 99999999999999976443 57999999999999
Q ss_pred CC--CCHHHHHHHHHHHHHh
Q 011767 416 TA--LNERQRAILEEFAEEE 433 (478)
Q Consensus 416 ~~--ls~~q~~ll~~~~~~~ 433 (478)
+. ||++|+++|++++...
T Consensus 80 ~~~~ls~~q~~~l~~l~~~~ 99 (121)
T 1xao_A 80 ENHFTSEENLKKLEEILPPR 99 (121)
T ss_dssp CTTCSCHHHHHHHHHHSCCC
T ss_pred CCCCCCHHHHHHHHHHcccc
Confidence 99 9999999999999754
No 8
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.85 E-value=5.1e-22 Score=167.22 Aligned_cols=73 Identities=49% Similarity=0.802 Sum_probs=68.3
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCC
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE 153 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~ 153 (478)
..|||+||||+++|+.+|||+|||+|+++||||+++.+++++++|++|++||++|+||.+|+.||+++..+..
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~ 74 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFE 74 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhc
Confidence 4699999999999999999999999999999999987788999999999999999999999999999876644
No 9
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.84 E-value=3.5e-21 Score=154.16 Aligned_cols=73 Identities=56% Similarity=0.853 Sum_probs=68.2
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCC
Q 011767 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (478)
Q Consensus 79 ~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g 151 (478)
....|||+||||+++|+.++||+|||+|+++||||++++++++.++|++|++||++|+||.+|..||+++..+
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 3457999999999999999999999999999999999877889999999999999999999999999997654
No 10
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.82 E-value=9.5e-21 Score=150.87 Aligned_cols=71 Identities=45% Similarity=0.776 Sum_probs=66.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCC
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS 152 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~ 152 (478)
..|||+||||+++|+.++||+|||+|++++|||+++. +.+.+.|++|++||++|+||.+|..||+++.++.
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 72 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGL 72 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccc
Confidence 4699999999999999999999999999999999975 6788999999999999999999999999976653
No 11
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.82 E-value=1.7e-20 Score=151.19 Aligned_cols=73 Identities=47% Similarity=0.734 Sum_probs=66.7
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc-hHHHHHHHHHHHHHhhhcchhhhhhhccccCC
Q 011767 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (478)
Q Consensus 79 ~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~-~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g 151 (478)
....|||+||||+++|+.+|||+|||+|+++||||+++... .++++|++|++||++|+||.+|..||+++..+
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 79 (82)
T 2ej7_A 6 SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGP 79 (82)
T ss_dssp SSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCS
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 34579999999999999999999999999999999998653 57889999999999999999999999997654
No 12
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=1.5e-20 Score=153.57 Aligned_cols=72 Identities=51% Similarity=0.858 Sum_probs=66.6
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCC
Q 011767 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (478)
Q Consensus 79 ~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g 151 (478)
....|||+||||+++|+.+|||+|||+|+++||||+++ ++.+.++|++|++||++|+||.+|..||.++..+
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 75 (88)
T 2ctr_A 4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDTLGHSA 75 (88)
T ss_dssp CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCC-SHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 34579999999999999999999999999999999998 4788999999999999999999999999997654
No 13
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=2e-20 Score=149.32 Aligned_cols=72 Identities=44% Similarity=0.713 Sum_probs=66.5
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCC
Q 011767 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (478)
Q Consensus 79 ~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g 151 (478)
....|||+||||+++|+.+|||+|||+|+++||||+++. +.+.+.|++|++||++|+||.+|..||+++..+
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA-PGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSS-HHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 345799999999999999999999999999999999974 788999999999999999999999999997654
No 14
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=1.6e-20 Score=156.80 Aligned_cols=71 Identities=38% Similarity=0.593 Sum_probs=67.0
Q ss_pred CCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccc
Q 011767 78 YSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (478)
Q Consensus 78 ~~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~ 148 (478)
.++..+||+||||+++|+.+|||+|||+|+++||||++++++++.++|++|++||+||+||.+|..||+..
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l 83 (99)
T 2yua_A 13 SYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGL 83 (99)
T ss_dssp SSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTC
T ss_pred CCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhc
Confidence 35678999999999999999999999999999999999887889999999999999999999999999964
No 15
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=3.5e-20 Score=152.73 Aligned_cols=74 Identities=45% Similarity=0.710 Sum_probs=67.2
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc-hHHHHHHHHHHHHHhhhcchhhhhhhccccCCC
Q 011767 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS 152 (478)
Q Consensus 79 ~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~-~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~ 152 (478)
....|||+||||+++|+.+|||+|||+|+++||||+++.+. .++++|++|++||++|+||.+|+.||+++..+.
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 80 (92)
T 2dmx_A 6 SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSW 80 (92)
T ss_dssp CCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSS
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 34579999999999999999999999999999999998653 688999999999999999999999999976553
No 16
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=3.5e-20 Score=158.26 Aligned_cols=73 Identities=37% Similarity=0.574 Sum_probs=68.6
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCC
Q 011767 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (478)
Q Consensus 79 ~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g 151 (478)
....|||+||||+++|+.+|||+|||+|+++||||+++++++++++|++|++||++|+||.+|+.||+++..+
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~ 89 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQ 89 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHT
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhc
Confidence 4557999999999999999999999999999999999877889999999999999999999999999997654
No 17
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.80 E-value=5.4e-20 Score=150.33 Aligned_cols=71 Identities=48% Similarity=0.792 Sum_probs=66.0
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCC
Q 011767 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (478)
Q Consensus 80 ~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g 151 (478)
...|||+||||+++|+.+|||+|||+|+++||||+++. +.++++|++|++||++|+||.+|..||+++..+
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD-PGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS-TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 45799999999999999999999999999999999975 678999999999999999999999999997643
No 18
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.79 E-value=7.2e-20 Score=144.25 Aligned_cols=67 Identities=39% Similarity=0.718 Sum_probs=61.9
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhcccc
Q 011767 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (478)
Q Consensus 80 ~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~ 149 (478)
...+||+||||+++|+.++||+|||+|++++|||++++. .+.|++|++||++|+||.+|+.||++|.
T Consensus 6 ~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 6 KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 457999999999999999999999999999999999754 6899999999999999999999999864
No 19
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.79 E-value=5.8e-20 Score=156.12 Aligned_cols=73 Identities=45% Similarity=0.735 Sum_probs=68.1
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCC
Q 011767 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (478)
Q Consensus 79 ~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g 151 (478)
....+||+||||+++|+.+|||+|||+|+++||||++++++++.++|++|++||++|+||.+|+.||+++..+
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~ 86 (109)
T 2ctw_A 14 TSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLG 86 (109)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccc
Confidence 4557999999999999999999999999999999999887889999999999999999999999999987544
No 20
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.79 E-value=5.5e-20 Score=151.51 Aligned_cols=71 Identities=37% Similarity=0.659 Sum_probs=64.6
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCC
Q 011767 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS 152 (478)
Q Consensus 79 ~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~ 152 (478)
....|||+||||+++|+.+|||+|||+|+++||||+++++ .++|++|++||++|+||.+|+.||+++..+.
T Consensus 5 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 75 (92)
T 2o37_A 5 VKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYGLEAA 75 (92)
T ss_dssp CSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHH
T ss_pred ccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHh
Confidence 3557999999999999999999999999999999999764 5799999999999999999999999976543
No 21
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.78 E-value=9.8e-20 Score=151.94 Aligned_cols=72 Identities=47% Similarity=0.738 Sum_probs=64.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc-hHHHHHHHHHHHHHhhhcchhhhhhhccccCCCC
Q 011767 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE 153 (478)
Q Consensus 82 ~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~-~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~ 153 (478)
.|||+||||+++|+.+|||+|||+|+++||||+++... .+++.|++|++||++|+||.+|+.||.++..+..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~ 74 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLT 74 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC---
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 58999999999999999999999999999999998653 5789999999999999999999999999876544
No 22
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.78 E-value=1.3e-19 Score=149.86 Aligned_cols=71 Identities=32% Similarity=0.597 Sum_probs=65.0
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------chHHHHHHHHHHHHHhhhcchhhhhhhcccc
Q 011767 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN------PSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (478)
Q Consensus 79 ~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~------~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~ 149 (478)
....|||+||||+++|+.+|||+|||+|+++||||+++.+ +.+.++|++|++||++|+||.+|+.||....
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 4567999999999999999999999999999999998743 4578999999999999999999999999854
No 23
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=2.7e-20 Score=156.94 Aligned_cols=99 Identities=32% Similarity=0.658 Sum_probs=89.5
Q ss_pred CCceEEEEeeeehhhccCccccccccceeccCCCCCCCccCCCcccccCCcccccEEEcC--C--ccccCCCcCCceEEe
Q 011767 202 APDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--P--FTSTCSTCKGLGRII 277 (478)
Q Consensus 202 g~di~~~l~ltlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--~--~~~~C~~C~G~G~~i 277 (478)
|.|+.++|.|||+|||+|.++++.+++.+.|+.|+|+|...+....+|+.|+|+|.+... + ...+|+.|+|+|+++
T Consensus 1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i 80 (104)
T 2ctt_A 1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSII 80 (104)
T ss_dssp CCCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEEC
T ss_pred CCceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceEC
Confidence 467888999999999999999999999999999999999988888999999999987532 2 367899999999999
Q ss_pred eeccccccCCceEeceEEEEEEe
Q 011767 278 KDHCMTCKGSGVVDGVKEVKVTI 300 (478)
Q Consensus 278 ~~~C~~C~G~G~~~~~k~~~V~I 300 (478)
+++|+.|+|.|++.+.++|+|+|
T Consensus 81 ~~~C~~C~G~G~v~~~k~l~V~~ 103 (104)
T 2ctt_A 81 ISPCVVCRGAGQAKQKKRSGPSS 103 (104)
T ss_dssp SSCCSSSSSCSEECCCCSSCCSC
T ss_pred CCcCCCCCCeeEEEEEEEEEEEc
Confidence 99999999999999988887765
No 24
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.73 E-value=1.4e-18 Score=147.72 Aligned_cols=70 Identities=34% Similarity=0.576 Sum_probs=64.5
Q ss_pred CCCCcccccCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC---CchHHHHHHHHHHHHHhhhcchhhhhhhcccc
Q 011767 80 SKRDPYELLGVPENA-SQDEIKKAFHMLAKQYHPDANKN---NPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (478)
Q Consensus 80 ~~~~~Y~vLgv~~~a-s~~eIk~ayr~la~~~HPDk~~~---~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~ 149 (478)
...|||+||||+++| +.+|||+|||+|++++|||++++ .+.+.+.|++|++||++|+||.+|+.||+++.
T Consensus 13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 357999999999999 99999999999999999999975 35688999999999999999999999999864
No 25
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.72 E-value=4.5e-18 Score=160.38 Aligned_cols=72 Identities=46% Similarity=0.760 Sum_probs=67.8
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCC
Q 011767 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE 153 (478)
Q Consensus 82 ~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~ 153 (478)
.|||+||||+++|+.+|||+|||+|+++||||++++++++.++|++|++||++|+||.+|+.||++|..+..
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~ 73 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE 73 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccc
Confidence 589999999999999999999999999999999988888999999999999999999999999999876543
No 26
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=9.5e-18 Score=137.49 Aligned_cols=62 Identities=32% Similarity=0.552 Sum_probs=57.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhh
Q 011767 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQ 143 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~ 143 (478)
..|||+||||+++|+.+|||+|||+|+++||||+++. +.+.++|++|++||++|+||.+|+.
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA-PGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCC-TTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCcccccC
Confidence 3699999999999999999999999999999999975 6788999999999999999998864
No 27
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.70 E-value=1e-17 Score=151.28 Aligned_cols=70 Identities=31% Similarity=0.588 Sum_probs=64.2
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc------hHHHHHHHHHHHHHhhhcchhhhhhhccc
Q 011767 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP------SAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (478)
Q Consensus 79 ~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~------~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~ 148 (478)
....|||+||||+++|+.++||+|||+|++++|||+++..+ .|.++|++|++||++|+||.+|+.||..+
T Consensus 7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~ 82 (155)
T 2l6l_A 7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQR 82 (155)
T ss_dssp CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHH
T ss_pred CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 45579999999999999999999999999999999998754 26789999999999999999999999875
No 28
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.70 E-value=1.3e-17 Score=157.02 Aligned_cols=101 Identities=19% Similarity=0.368 Sum_probs=77.0
Q ss_pred cccccccccccccccccCCCCchhhhhhhhcccCCCCCCCCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCc
Q 011767 42 HKRGLYYCSSVTGTLADFGTTGMFLARRCIHATGSCYSSKRDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNP 119 (478)
Q Consensus 42 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~vLgv~~~--as~~eIk~ayr~la~~~HPDk~~~~~ 119 (478)
....||+|...... .....+++..+....++ ....|||+||||+++ ++.++||+|||+|+++||||++++.+
T Consensus 9 ~~~~Cw~C~~~~~~----~~~~~~fC~~c~~~q~~--~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~ 82 (207)
T 3bvo_A 9 NYPRCWNCGGPWGP----GREDRFFCPQCRALQAP--DPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRS 82 (207)
T ss_dssp --CBCSSSCCBCCS----SCSCCCBCTTTCCBCCC--CTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSC
T ss_pred CCCCCCCCCCCccc----ccccccccccccccCCC--CCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 34679999863211 12233556666555433 235799999999986 78999999999999999999998654
Q ss_pred h-----HHHHHHHHHHHHHhhhcchhhhhhhccc
Q 011767 120 S-----AKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (478)
Q Consensus 120 ~-----a~~~f~~i~~Ay~vL~dp~~R~~yD~~~ 148 (478)
+ |.++|++|++||+||+||.+|+.||...
T Consensus 83 ~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l 116 (207)
T 3bvo_A 83 QTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKL 116 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHh
Confidence 3 5678999999999999999999999753
No 29
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.68 E-value=8.7e-18 Score=136.81 Aligned_cols=69 Identities=20% Similarity=0.218 Sum_probs=60.7
Q ss_pred CCCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc-hHHHHHHHHHHHHHhhhcchhhhh
Q 011767 75 GSCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQ 143 (478)
Q Consensus 75 ~~~~~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~-~a~~~f~~i~~Ay~vL~dp~~R~~ 143 (478)
.+......++|+||||+++|+.+|||+|||+||++||||++++++ .|+++|++|++||++|+|...|..
T Consensus 9 ~~~~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~ 78 (88)
T 1iur_A 9 VPRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQ 78 (88)
T ss_dssp CCSSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred CCCCccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccccc
Confidence 344456679999999999999999999999999999999998763 588999999999999999887743
No 30
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.66 E-value=4.3e-17 Score=130.23 Aligned_cols=62 Identities=18% Similarity=0.306 Sum_probs=56.3
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccc
Q 011767 82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (478)
Q Consensus 82 ~~~Y~vLgv~~~--as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~ 148 (478)
.++|+||||+++ ++.++||+|||+||+++|||++++ .++|++|++||++|+|+.+|..+ .+|
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~~-~~g 74 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLRM-NLG 74 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHTT-CCS
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHHH-hcC
Confidence 589999999999 999999999999999999999863 58999999999999999999874 453
No 31
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.66 E-value=1.1e-17 Score=142.66 Aligned_cols=64 Identities=23% Similarity=0.396 Sum_probs=59.8
Q ss_pred CCcccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhcccc
Q 011767 82 RDPYELLGVPENASQ--DEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (478)
Q Consensus 82 ~~~Y~vLgv~~~as~--~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~ 149 (478)
.+||+||||+++|+. ++||+|||+||+++|||++++ +++|++|++||+||+||.+|+.||.++.
T Consensus 8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 589999999999999 999999999999999999875 4799999999999999999999998754
No 32
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.65 E-value=6.8e-17 Score=148.35 Aligned_cols=68 Identities=31% Similarity=0.515 Sum_probs=62.3
Q ss_pred CCCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCCch-----HHHHHHHHHHHHHhhhcchhhhhhhccc
Q 011767 81 KRDPYELLGVPENAS--QDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (478)
Q Consensus 81 ~~~~Y~vLgv~~~as--~~eIk~ayr~la~~~HPDk~~~~~~-----a~~~f~~i~~Ay~vL~dp~~R~~yD~~~ 148 (478)
..|||+||||+++++ .++||+|||+|+++||||++++.+. |.+.|+.|++||+||+||.+|+.||...
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 77 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSL 77 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHc
Confidence 369999999999988 9999999999999999999987654 6789999999999999999999999864
No 33
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.64 E-value=2.1e-17 Score=150.57 Aligned_cols=64 Identities=23% Similarity=0.391 Sum_probs=57.3
Q ss_pred CCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhcccc
Q 011767 82 RDPYELLGVPENAS--QDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (478)
Q Consensus 82 ~~~Y~vLgv~~~as--~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~ 149 (478)
.|||+||||+++|+ .+|||+|||+||+++|||++++ +++|++|++||++|+||.+|+.||++|.
T Consensus 11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 58999999999998 6999999999999999999875 3789999999999999999999999975
No 34
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.62 E-value=1.5e-16 Score=145.81 Aligned_cols=66 Identities=21% Similarity=0.447 Sum_probs=60.6
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCch---HHHHHHHHHHHHHhhhcchhhhhh
Q 011767 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS---AKRKFQEIRDAYETLRDSEKRAQY 144 (478)
Q Consensus 79 ~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~---a~~~f~~i~~Ay~vL~dp~~R~~y 144 (478)
+...+||++|||+++|+.+|||+|||+|+++||||++++.+. |+++|++|++||++|+||.+|+.|
T Consensus 114 ~~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 114 WAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CTTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cCccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 334699999999999999999999999999999999986553 889999999999999999999987
No 35
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.62 E-value=1.6e-16 Score=145.44 Aligned_cols=67 Identities=30% Similarity=0.480 Sum_probs=61.7
Q ss_pred CcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCch-----HHHHHHHHHHHHHhhhcchhhhhhhcccc
Q 011767 83 DPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (478)
Q Consensus 83 ~~Y~vLgv~~~a--s~~eIk~ayr~la~~~HPDk~~~~~~-----a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~ 149 (478)
|||+||||++++ +.++||+|||+|+++||||++++.++ |.++|+.|++||+||+||.+|+.||....
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 799999999999 99999999999999999999987653 45799999999999999999999999743
No 36
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.60 E-value=2.5e-16 Score=128.72 Aligned_cols=56 Identities=21% Similarity=0.440 Sum_probs=52.1
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc---hHHHHHHHHHHHHHhhhc
Q 011767 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP---SAKRKFQEIRDAYETLRD 137 (478)
Q Consensus 82 ~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~---~a~~~f~~i~~Ay~vL~d 137 (478)
.++|++|||+++||.+|||+|||++|++||||++++++ .|+++|++|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 58999999999999999999999999999999998765 378899999999999986
No 37
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.58 E-value=7.5e-16 Score=120.48 Aligned_cols=59 Identities=15% Similarity=0.278 Sum_probs=52.6
Q ss_pred CCCCCcccccCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhh
Q 011767 79 SSKRDPYELLGVPE-NASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKR 141 (478)
Q Consensus 79 ~~~~~~Y~vLgv~~-~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R 141 (478)
+...++|+||||++ +|+.+|||+|||+|++++|||++++ .+.|++|++||++|+|+..|
T Consensus 11 m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~----~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 11 MNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS----PFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp CCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC----HHHHHHHHHHHHHHHHHCCC
T ss_pred CCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC----HHHHHHHHHHHHHHhhhhhc
Confidence 34468999999999 7999999999999999999999643 56999999999999998765
No 38
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.56 E-value=9.8e-16 Score=141.28 Aligned_cols=66 Identities=29% Similarity=0.491 Sum_probs=59.8
Q ss_pred CCCCccccc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccc
Q 011767 80 SKRDPYELL------GVPE-NASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (478)
Q Consensus 80 ~~~~~Y~vL------gv~~-~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~ 148 (478)
...|||+|| |+++ +|+.++||+|||+|+++||||++++ +.++|++|++||+||+||.+|+.||...
T Consensus 9 ~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 9 FTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp CSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 346999999 4665 8999999999999999999999975 5689999999999999999999999965
No 39
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.56 E-value=8.4e-16 Score=129.43 Aligned_cols=60 Identities=13% Similarity=0.200 Sum_probs=52.7
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---Cc----hHHHHHHHHHHHHHhhhcch
Q 011767 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN---NP----SAKRKFQEIRDAYETLRDSE 139 (478)
Q Consensus 79 ~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~---~~----~a~~~f~~i~~Ay~vL~dp~ 139 (478)
+...|||+||+++. ||.+|||+|||+||++|||||+++ ++ .|+++|++|++||++|+|+.
T Consensus 38 ~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 38 WSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp CTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 34579999999996 999999999999999999999863 11 36889999999999999985
No 40
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.52 E-value=1.2e-15 Score=170.64 Aligned_cols=76 Identities=43% Similarity=0.730 Sum_probs=40.9
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcchhhhhhhccccCCCCC
Q 011767 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSEN 154 (478)
Q Consensus 79 ~~~~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp~~R~~yD~~~~~g~~~ 154 (478)
....|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||++|+||.+|+.||++|..+...
T Consensus 18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~ 93 (780)
T 3apo_A 18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 93 (780)
T ss_dssp -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-------
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhccccccc
Confidence 4557999999999999999999999999999999999877889999999999999999999999999998766543
No 41
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=99.35 E-value=5e-13 Score=106.48 Aligned_cols=74 Identities=38% Similarity=0.885 Sum_probs=64.9
Q ss_pred CccccccccceeccCCCCCCCccCCCcccccCCcccccEEEcC----CccccCCCcCCceEEeeeccccccCCceEec
Q 011767 219 GCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDG 292 (478)
Q Consensus 219 G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~ 292 (478)
|++++|.+++.+.|+.|+|+|........+|+.|+|+|.+... .+..+|+.|+|+|.+++++|+.|+|.|++.+
T Consensus 1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~G~~~~ 78 (79)
T 1exk_A 1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVER 78 (79)
T ss_dssp CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECSSBCGGGTTSSEEEC
T ss_pred CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEECCCcCCCCCCeEEEee
Confidence 6788999999999999999999877777899999999987531 1357899999999999999999999998854
No 42
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=99.25 E-value=1.5e-11 Score=119.02 Aligned_cols=108 Identities=25% Similarity=0.434 Sum_probs=77.1
Q ss_pred eeccCCCCCCCccCC---------CcccccCCcccccEEEcCCccccCCCcCCceEEeeeccccccCC-ceEeceE----
Q 011767 229 FVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK---- 294 (478)
Q Consensus 229 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~~C~~C~G~-G~~~~~k---- 294 (478)
...|+.|+|+|.... ....+|+.|+|.|.++. ...+|+.|+|.|.+.+..=...... |+.++++
T Consensus 54 ~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~--~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~ 131 (248)
T 1nlt_A 54 VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIID--PKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFK 131 (248)
T ss_dssp CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCC--TTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEET
T ss_pred CccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCCcCEEec--cCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEe
Confidence 378999999997421 23568999999998631 2779999999998643211111111 1111111
Q ss_pred ----------------------------------------------------------EEEEEecCc--CCCCCEEEECC
Q 011767 295 ----------------------------------------------------------EVKVTIPAG--VDSGDTIRVPE 314 (478)
Q Consensus 295 ----------------------------------------------------------~~~V~Ip~G--~~~G~~i~l~g 314 (478)
.++|.|||| +++|++++++|
T Consensus 132 g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g 211 (248)
T 1nlt_A 132 GEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEG 211 (248)
T ss_dssp TCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETT
T ss_pred eeecCCCCCCcceEEEEEEEecCccceeeCCEEEEEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcC
Confidence 589999999 99999999999
Q ss_pred CCCCCCCCCCCccEEEEEEEecCC
Q 011767 315 AGNAGGRGRQHGNLFIKLKVADDP 338 (478)
Q Consensus 315 ~G~~~~~g~~~GDL~v~i~v~~h~ 338 (478)
+|.+...+...|||||+|+|.-..
T Consensus 212 ~Gmp~~~~~~~GDL~V~~~V~~P~ 235 (248)
T 1nlt_A 212 KGMPIPKYGGYGNLIIKFTIKDPE 235 (248)
T ss_dssp CSCBCSSSCSBCCEEEEEEEECCC
T ss_pred CCCccCCCCCcCCEEEEEEEECCC
Confidence 999865443579999999998443
No 43
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.85 E-value=1.4e-09 Score=111.04 Aligned_cols=65 Identities=46% Similarity=0.710 Sum_probs=55.8
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---chHHHHHHHHHHHHHhhhcchhhhhhhc
Q 011767 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN---PSAKRKFQEIRDAYETLRDSEKRAQYDR 146 (478)
Q Consensus 82 ~~~Y~vLgv~~~as~~eIk~ayr~la~~~HPDk~~~~---~~a~~~f~~i~~Ay~vL~dp~~R~~yD~ 146 (478)
.++|++||+.+.++.++|+++|+++++++|||+.+.+ ..++++|++|++||++|+||.+|..||.
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 4899999999999999999999999999999999754 2478899999999999999999999997
No 44
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.70 E-value=1.4e-08 Score=77.20 Aligned_cols=52 Identities=17% Similarity=0.232 Sum_probs=46.2
Q ss_pred CcccccCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHhhhcc
Q 011767 83 DPYELLGVPEN---ASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138 (478)
Q Consensus 83 ~~Y~vLgv~~~---as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~dp 138 (478)
+-|.||||+++ ++.++|+++||+|....|||+.+. .....+|++|++.|...
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS----~yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS----FYLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHHHHH
Confidence 56899999999 999999999999999999999754 46778999999999754
No 45
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=98.66 E-value=1.2e-08 Score=86.05 Aligned_cols=75 Identities=23% Similarity=0.349 Sum_probs=61.3
Q ss_pred cCCCceEEEEeeeehhhccCccccccccceeccCCCCCCCccCCCcccccCCcccccEEEcCCccccCCCcCCceEEeee
Q 011767 200 HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (478)
Q Consensus 200 ~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~ 279 (478)
+.|.|+..++.|+|.||+.|++.+|..-
T Consensus 9 R~G~DL~~~~~Isl~eAl~G~~i~v~tl---------------------------------------------------- 36 (109)
T 3i38_A 9 IVGHNLEIVLPLAPWEAALGAKVTVPTL---------------------------------------------------- 36 (109)
T ss_dssp EETTEEEEEEEECHHHHHHCEEEEECCS----------------------------------------------------
T ss_pred EECCEEEEEEEcCHHHHhCCCEEEEEcC----------------------------------------------------
Confidence 4588999999999999999988766521
Q ss_pred ccccccCCceEeceEEEEEEecCcCCCCCEEEECCCCCCCCCCCCCccEEEEEEEecCCCcc
Q 011767 280 HCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFS 341 (478)
Q Consensus 280 ~C~~C~G~G~~~~~k~~~V~Ip~G~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~f~ 341 (478)
.+ .++|.||+|+++|++++++|+|.+. .+ ..|||||+|+|.-.....
T Consensus 37 -----------dG--~~~v~ip~g~~~G~~~rl~G~G~p~-~~-~~GDL~v~~~V~~P~~Ls 83 (109)
T 3i38_A 37 -----------KE--SILLTVPPGSQAGQRLRIKGKGLVS-KT-HTGDLFAVIKIVMPTKPD 83 (109)
T ss_dssp -----------SS--CEEEEECTTCCTTCEEEETTCSCBC-SS-CBCCEEEEEEECCCSSCC
T ss_pred -----------CC--CEEEeeCCCcCcCeEEEECCccCCC-CC-CCcCEEEEEEEECCCCCC
Confidence 01 3679999999999999999999987 34 789999999998554443
No 46
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=98.63 E-value=1.8e-08 Score=86.58 Aligned_cols=76 Identities=20% Similarity=0.140 Sum_probs=58.5
Q ss_pred cCCCceEEEEeeeehhhccCccccccccceeccCCCCCCCccCCCcccccCCcccccEEEcCCccccCCCcCCceEEeee
Q 011767 200 HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (478)
Q Consensus 200 ~~g~di~~~l~ltlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~ 279 (478)
+.|.|+..++.|+|.||+.|++..|..-
T Consensus 4 R~G~DL~~~~~Isl~eAllG~~i~v~tl---------------------------------------------------- 31 (121)
T 1xao_A 4 RDGDDLVYEAEIDLLTAIAGGEFALEHV---------------------------------------------------- 31 (121)
T ss_dssp EETTEEEEEEEEEHHHHHHCEEEEEECT----------------------------------------------------
T ss_pred EECCeEEEEEEcCHHHHhCCCEEEEecC----------------------------------------------------
Confidence 4588999999999999999987766421
Q ss_pred ccccccCCceEeceEEEEEEecCc--CCCCCEEEECCCCCCCCCCCCCccEEEEEEEecCCC
Q 011767 280 HCMTCKGSGVVDGVKEVKVTIPAG--VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPI 339 (478)
Q Consensus 280 ~C~~C~G~G~~~~~k~~~V~Ip~G--~~~G~~i~l~g~G~~~~~g~~~GDL~v~i~v~~h~~ 339 (478)
..+.++|.||+| +++|++++++|+|.+...+...|||||+++|.-...
T Consensus 32 ------------dG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~ 81 (121)
T 1xao_A 32 ------------SGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPEN 81 (121)
T ss_dssp ------------TSCEEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCT
T ss_pred ------------CCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCC
Confidence 012467999999 999999999999998654436799999999985544
No 47
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=98.56 E-value=8e-08 Score=88.34 Aligned_cols=72 Identities=19% Similarity=0.256 Sum_probs=59.8
Q ss_pred CCceeecccCCHHHHhcCCeEEEecCC------------CEEEEEeCCCCCCCcEEEEcCCCcc-CCCCCCCCCcEEEEE
Q 011767 344 GADVYVDSNISFTQAILGGKVDVPTLS------------GKVQVKIPKGVQPGQLLVLRGKGLA-KNGLFLDHGDQYVRF 410 (478)
Q Consensus 344 G~DL~~~~~Isl~eAl~G~~~~i~tld------------G~~~v~ip~g~~~g~~~~i~g~G~p-~~~~~~~~GdL~v~~ 410 (478)
|.|+.+++.|||.||+.|++++|.... ..++|+||+|+.+|++++++|+|-+ ..+. ..|||||.+
T Consensus 3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg--~~GDl~v~i 80 (180)
T 2q2g_A 3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGT--SPGDLVLII 80 (180)
T ss_dssp -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTEEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTS--CCCEEEEEE
T ss_pred CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCC--ccccEEEEE
Confidence 789999999999999999998887431 3478999999999999999999987 4443 369999999
Q ss_pred EEeCCCC
Q 011767 411 RVNFPTA 417 (478)
Q Consensus 411 ~V~~P~~ 417 (478)
+|.-...
T Consensus 81 ~~~~h~~ 87 (180)
T 2q2g_A 81 QTKTHPR 87 (180)
T ss_dssp EECCCSS
T ss_pred EEEeccc
Confidence 9985443
No 48
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=98.49 E-value=1.9e-07 Score=85.96 Aligned_cols=73 Identities=14% Similarity=0.162 Sum_probs=57.7
Q ss_pred CCceeecccCCHHHHhcCCeEEEecC------CC--------EEEEEeCCCCCCCcEEEEcCCCccCCCCCCCCCcEEEE
Q 011767 344 GADVYVDSNISFTQAILGGKVDVPTL------SG--------KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVR 409 (478)
Q Consensus 344 G~DL~~~~~Isl~eAl~G~~~~i~tl------dG--------~~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~~GdL~v~ 409 (478)
|.|+.+++.|||.||+.|++++|... .| .++|+||+|+.+|++++++|+|-+..+. ..|||||.
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~g--~~GDl~v~ 79 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNN--IPADIVFV 79 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSSS--CCCCEEEE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCCC--CcccEEEE
Confidence 56899999999999999999887632 23 2689999999999999999999986643 46999999
Q ss_pred EEEeCCCCC
Q 011767 410 FRVNFPTAL 418 (478)
Q Consensus 410 ~~V~~P~~l 418 (478)
++|.-...+
T Consensus 80 i~~~~h~~F 88 (181)
T 3agx_A 80 LKDKPHNIF 88 (181)
T ss_dssp EEECCCSSC
T ss_pred EEEeccccc
Confidence 999855443
No 49
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.48 E-value=1.1e-07 Score=95.37 Aligned_cols=74 Identities=22% Similarity=0.360 Sum_probs=58.3
Q ss_pred cCCCceeecccCCHHHHhcCCeEEEecC------CC--------EEEEEeCCCCCCCcEEEEcCCCccCCCCCCCCCcEE
Q 011767 342 RDGADVYVDSNISFTQAILGGKVDVPTL------SG--------KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQY 407 (478)
Q Consensus 342 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG--------~~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~~GdL~ 407 (478)
+.|.||.+++.|+|.||+.|.++.|..- .| .++|+||+|+++|++++++|+|.|..+. ...||||
T Consensus 138 ~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~g-g~~GDL~ 216 (329)
T 3lz8_A 138 ARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENG-GPNGDLW 216 (329)
T ss_dssp CCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC----CCCCCEE
T ss_pred CCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCC-CCCCcEE
Confidence 5688999999999999999987766542 22 3689999999999999999999986522 2369999
Q ss_pred EEEEEeCCC
Q 011767 408 VRFRVNFPT 416 (478)
Q Consensus 408 v~~~V~~P~ 416 (478)
|+|+|.-..
T Consensus 217 v~I~v~~h~ 225 (329)
T 3lz8_A 217 LVIHIAPHP 225 (329)
T ss_dssp EEECCCCCS
T ss_pred EEEEEecCC
Confidence 999887544
No 50
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=98.47 E-value=2.1e-07 Score=84.76 Aligned_cols=71 Identities=11% Similarity=0.144 Sum_probs=58.8
Q ss_pred CceeecccCCHHHHhcCCeEEEecC----C-----CEEEEEeCCCCCCCcEEEEcCCCccCC-CCCCCCCcEEEEEEEeC
Q 011767 345 ADVYVDSNISFTQAILGGKVDVPTL----S-----GKVQVKIPKGVQPGQLLVLRGKGLAKN-GLFLDHGDQYVRFRVNF 414 (478)
Q Consensus 345 ~DL~~~~~Isl~eAl~G~~~~i~tl----d-----G~~~v~ip~g~~~g~~~~i~g~G~p~~-~~~~~~GdL~v~~~V~~ 414 (478)
.|+.+++.|||.||+.|++++|... + ..++|+||+|+.+|++++++|+|-+.. +. ..|||||+++|.-
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~~~~G~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg--~~GDl~v~i~v~~ 78 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTG--RRKTLQFVIQEKS 78 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSSSS--CBCEEEEEEEECC
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEecCCCcEEeEEEEEEeCCCccCCCEEEEeccccCCCCCC--ccccEEEEEEEcc
Confidence 3889999999999999999888743 1 247899999999999999999998643 33 3599999999985
Q ss_pred CCC
Q 011767 415 PTA 417 (478)
Q Consensus 415 P~~ 417 (478)
...
T Consensus 79 h~~ 81 (170)
T 1c3g_A 79 HPN 81 (170)
T ss_dssp CSS
T ss_pred CCc
Confidence 543
No 51
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=97.58 E-value=2.3e-05 Score=61.66 Aligned_cols=46 Identities=33% Similarity=0.805 Sum_probs=29.6
Q ss_pred ceeccCCCCCCCccCC-----CcccccCCcccccEEEcCCccccCCCcCCceEEe
Q 011767 228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRII 277 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i 277 (478)
....|+.|+|+|.... ....+|+.|+|.|.+ +..+|+.|+|.|.+.
T Consensus 27 ~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~G~~~ 77 (79)
T 1exk_A 27 QPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTL----IKDPCNKCHGHGRVE 77 (79)
T ss_dssp CCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEE----CSSBCGGGTTSSEEE
T ss_pred cCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEE----CCCcCCCCCCeEEEe
Confidence 3457777777775432 113467777777776 356777777777664
No 52
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=97.58 E-value=2.3e-05 Score=56.87 Aligned_cols=30 Identities=37% Similarity=0.836 Sum_probs=24.5
Q ss_pred ccccCCCcCCceEEeeeccccccCCceEec
Q 011767 263 FTSTCSTCKGLGRIIKDHCMTCKGSGVVDG 292 (478)
Q Consensus 263 ~~~~C~~C~G~G~~i~~~C~~C~G~G~~~~ 292 (478)
++.+|+.|+|+|.++.++|+.|+|.|.+.+
T Consensus 8 ~~~~C~~C~GsG~~i~~~C~~C~G~G~v~~ 37 (53)
T 3lcz_A 8 LETTCPNCNGSGREEPEPCPKCLGKGVILT 37 (53)
T ss_dssp HEEECTTTTTSCEETTEECTTTTTSSEEEC
T ss_pred eeccCcCCcccccCCCCcCCCCCCcEEEEE
Confidence 467888888888888888888888887754
No 53
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.47 E-value=5.5e-05 Score=62.87 Aligned_cols=48 Identities=27% Similarity=0.704 Sum_probs=38.4
Q ss_pred ceeccCCCCCCCccCC-----CcccccCCcccccEEEcCCccccCCCcCCceEEeee
Q 011767 228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~~ 279 (478)
....|+.|+|+|.... ....+|+.|+|.|.+ +..+|+.|+|.|.+.+.
T Consensus 44 ~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~----i~~~C~~C~G~G~v~~~ 96 (104)
T 2ctt_A 44 KVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSI----IISPCVVCRGAGQAKQK 96 (104)
T ss_dssp CCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEE----CSSCCSSSSSCSEECCC
T ss_pred CCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceE----CCCcCCCCCCeeEEEEE
Confidence 4578999999996521 234689999999997 46799999999998654
No 54
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=97.41 E-value=1.8e-05 Score=85.68 Aligned_cols=51 Identities=14% Similarity=0.266 Sum_probs=46.5
Q ss_pred EEEEeeeehhhccCccccccccceeccCCCCCCCccCCC---cccccCCccccc
Q 011767 206 QVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADA---KTKICSTCRGIG 256 (478)
Q Consensus 206 ~~~l~ltlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~---~~~~C~~C~G~G 256 (478)
.+.+.|+|+|+..|.++++.+.+...|..|+|+|...+. ...+|+.|+|..
T Consensus 168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~ 221 (669)
T 3pmq_A 168 ITNQHYDWQSSGNMLAYTRNLVSIDTCNSCHSNLAFHGGRYNQVETCVTCHNSK 221 (669)
T ss_dssp SCCCEEEEECSSSSCCCCCCCCCSHHHHHHHSSCCTTTTTSCSSSCSTTTSSTT
T ss_pred eEEEEEEhHHhhCCCceEEEeccCCcCCCCCCCCCcCCccCcCCccCCCCCCCc
Confidence 357788999999999999999999999999999998876 578999999994
No 55
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=96.88 E-value=0.0004 Score=50.27 Aligned_cols=24 Identities=38% Similarity=0.933 Sum_probs=10.2
Q ss_pred cCCCcCCceEEeeeccccccCCce
Q 011767 266 TCSTCKGLGRIIKDHCMTCKGSGV 289 (478)
Q Consensus 266 ~C~~C~G~G~~i~~~C~~C~G~G~ 289 (478)
+|+.|+|+|.++..+|+.|.|.|.
T Consensus 11 ~C~~C~GsG~~~~~~C~~C~G~G~ 34 (53)
T 2bx9_A 11 ACPKCERAGEIEGTPCPACSGKGV 34 (53)
T ss_dssp ECTTTTTSSEETTEECTTTTTSSE
T ss_pred cCCCCcceeccCCCCCccCCCCcc
Confidence 344444444444444444444443
No 56
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=96.83 E-value=0.00055 Score=49.56 Aligned_cols=28 Identities=36% Similarity=0.854 Sum_probs=16.0
Q ss_pred cccCCcccccEEEcCCccccCCCcCCceEEee
Q 011767 247 KICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK 278 (478)
Q Consensus 247 ~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~i~ 278 (478)
.+|+.|+|+|.+ +..+|+.|+|+|.+.+
T Consensus 10 ~~C~~C~GsG~~----i~~~C~~C~G~G~v~~ 37 (53)
T 3lcz_A 10 TTCPNCNGSGRE----EPEPCPKCLGKGVILT 37 (53)
T ss_dssp EECTTTTTSCEE----TTEECTTTTTSSEEEC
T ss_pred ccCcCCcccccC----CCCcCCCCCCcEEEEE
Confidence 355555555554 2456666666666543
No 57
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=96.70 E-value=0.00078 Score=48.76 Aligned_cols=13 Identities=38% Similarity=1.066 Sum_probs=6.9
Q ss_pred ccCCCcCCceEEe
Q 011767 265 STCSTCKGLGRII 277 (478)
Q Consensus 265 ~~C~~C~G~G~~i 277 (478)
.+|+.|+|.|.++
T Consensus 24 ~~C~~C~G~G~v~ 36 (53)
T 2bx9_A 24 TPCPACSGKGVIL 36 (53)
T ss_dssp EECTTTTTSSEEE
T ss_pred CCCccCCCCccEE
Confidence 4455555555554
No 58
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=84.82 E-value=0.51 Score=51.26 Aligned_cols=47 Identities=15% Similarity=0.269 Sum_probs=37.6
Q ss_pred CCCCcccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHHh
Q 011767 80 SKRDPYELLGVPENASQ--DEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYET 134 (478)
Q Consensus 80 ~~~~~Y~vLgv~~~as~--~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~v 134 (478)
..++||.+||++.++.. .+|++|||+||+..+++ .+++..|..|+.|
T Consensus 627 ~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 627 NKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV 675 (681)
T ss_dssp CCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred cCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence 34569999999776655 67999999999975433 5789999999876
No 59
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=29.68 E-value=28 Score=25.39 Aligned_cols=22 Identities=36% Similarity=0.915 Sum_probs=10.4
Q ss_pred ccccCCcccccEEEcCCccccCCCcCCc
Q 011767 246 TKICSTCRGIGRVTIPPFTSTCSTCKGL 273 (478)
Q Consensus 246 ~~~C~~C~G~G~~~~~~~~~~C~~C~G~ 273 (478)
..+|+.| |..+ +...|+.|++.
T Consensus 5 mr~C~~C---g~YT---Lk~~CP~CG~~ 26 (60)
T 2aus_D 5 IRKCPKC---GRYT---LKETCPVCGEK 26 (60)
T ss_dssp CEECTTT---CCEE---SSSBCTTTCSB
T ss_pred ceECCCC---CCEE---ccccCcCCCCc
Confidence 4456666 3222 24445555544
No 60
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=29.16 E-value=31 Score=25.13 Aligned_cols=10 Identities=20% Similarity=0.640 Sum_probs=5.0
Q ss_pred cccCCCcCCc
Q 011767 264 TSTCSTCKGL 273 (478)
Q Consensus 264 ~~~C~~C~G~ 273 (478)
...|+.|++.
T Consensus 18 k~~CP~CG~~ 27 (60)
T 2apo_B 18 KEICPKCGEK 27 (60)
T ss_dssp SSBCSSSCSB
T ss_pred cccCcCCCCc
Confidence 4455555543
No 61
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=27.05 E-value=1.8e+02 Score=27.40 Aligned_cols=16 Identities=19% Similarity=0.430 Sum_probs=0.0
Q ss_pred CCCHHHHHHHHHHHHH
Q 011767 417 ALNERQRAILEEFAEE 432 (478)
Q Consensus 417 ~ls~~q~~ll~~~~~~ 432 (478)
.+|+++.+.++++.+.
T Consensus 255 ~~t~ed~~~i~~ls~~ 270 (279)
T 1ltl_A 255 QISEEDEEKIKELAGD 270 (279)
T ss_dssp ----------------
T ss_pred CCCHHHHHHHHHHhcC
Confidence 3677777777776643
No 62
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=26.15 E-value=38 Score=26.50 Aligned_cols=24 Identities=33% Similarity=0.570 Sum_probs=21.2
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHhc
Q 011767 411 RVNFPTALNERQRAILEEFAEEEI 434 (478)
Q Consensus 411 ~V~~P~~ls~~q~~ll~~~~~~~~ 434 (478)
.+.||..||+.||.++-+++....
T Consensus 35 ~l~FP~sLs~~eR~~IH~lA~~~G 58 (86)
T 1msz_A 35 QLEFPPSLNSHDRLRVHQIAEEHG 58 (86)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHTT
T ss_pred EEEcCCCCCHHHHHHHHHHHHHcC
Confidence 678999999999999999997653
No 63
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} SCOP: b.29.1.3 PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A*
Probab=25.45 E-value=1.1e+02 Score=25.51 Aligned_cols=43 Identities=23% Similarity=0.405 Sum_probs=31.1
Q ss_pred EEEeCCCCCCCcEEEEcCCCccCCC--------CCCCCCcEEEEEEEeCCC
Q 011767 374 QVKIPKGVQPGQLLVLRGKGLAKNG--------LFLDHGDQYVRFRVNFPT 416 (478)
Q Consensus 374 ~v~ip~g~~~g~~~~i~g~G~p~~~--------~~~~~GdL~v~~~V~~P~ 416 (478)
.-.||.|.++|+.++|.|.=.+... ......|+.+||++.|.+
T Consensus 9 ~~~i~~gl~~G~~i~I~G~v~~~a~rF~Inl~~g~~~~~dialHfnpRf~~ 59 (138)
T 3zxf_A 9 KSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDT 59 (138)
T ss_dssp EEECTTCCCSSEEEEEEEEECTTCCBEEEEEESSSSTTCCEEEEEEEETTT
T ss_pred EeecCCCCCCCCEEEEEEEECCCCCEEEEEeeeCCCCCCCEEEEEEEEcCC
Confidence 5678999999999999886433221 111246999999999964
No 64
>2lli_A Protein AIR2; RNA surveillance, RNA degradation, RNA binding, exosome, RNA protein; NMR {Saccharomyces cerevisiae}
Probab=24.11 E-value=33 Score=28.30 Aligned_cols=9 Identities=44% Similarity=1.335 Sum_probs=3.9
Q ss_pred cCCCCCCCc
Q 011767 232 CDSCHGRGF 240 (478)
Q Consensus 232 C~~C~G~G~ 240 (478)
|..|...|-
T Consensus 7 C~~C~~~GH 15 (124)
T 2lli_A 7 CNNCSQRGH 15 (124)
T ss_dssp CSSCSSSSC
T ss_pred ccCCCCCCc
Confidence 444444443
No 65
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=23.98 E-value=61 Score=23.47 Aligned_cols=49 Identities=22% Similarity=0.290 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCchHHHHHHHH---HHHHHhhhc-ch-hhhhhhccc
Q 011767 97 DEIKKAFHMLAKQYHPDANKNNPSAKRKFQEI---RDAYETLRD-SE-KRAQYDRRR 148 (478)
Q Consensus 97 ~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i---~~Ay~vL~d-p~-~R~~yD~~~ 148 (478)
+|..+||.+|.+...=|-.= .=++..+.| ..-|.+|.| |. ++++|+.|.
T Consensus 3 eEae~aF~~lL~~~~V~s~w---sweqamr~i~i~DPrY~al~d~~~eRK~~Fe~Y~ 56 (59)
T 2b7e_A 3 MEAEKEFITMLKENQVDSTW---SFSRIISELGTRDPRYWMVDDDPLWKKEMFEKYL 56 (59)
T ss_dssp THHHHHHHHHHHHTTCCSSC---CHHHHHHHHHHHCTHHHHSCCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCC---cHHHHHHHhccCCCccccccCCHHHHHHHHHHHH
Confidence 57789999998877543322 234556666 358999997 65 677787763
No 66
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=22.63 E-value=1e+02 Score=23.30 Aligned_cols=53 Identities=19% Similarity=0.286 Sum_probs=38.1
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCCc--hHHHHHHHHHHHHHhhhc-chhhhhhhccc
Q 011767 95 SQDEIKKAFHMLAKQYHPDANKNNP--SAKRKFQEIRDAYETLRD-SEKRAQYDRRR 148 (478)
Q Consensus 95 s~~eIk~ayr~la~~~HPDk~~~~~--~a~~~f~~i~~Ay~vL~d-p~~R~~yD~~~ 148 (478)
-..-++.+|+.+.+...|....... .+...|..- .+|..+.+ ..++.+|+.|.
T Consensus 7 r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~-~~fkav~~E~eR~~lFeeYi 62 (77)
T 2cqn_A 7 GMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKE-PAFEDITLESERKRIFKDFM 62 (77)
T ss_dssp SHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTS-HHHHTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccC-HHHHhcCCHHHHHHHHHHHH
Confidence 4567899999998888888776543 344555543 38999966 57778888874
No 67
>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}
Probab=22.15 E-value=30 Score=35.04 Aligned_cols=14 Identities=14% Similarity=0.506 Sum_probs=9.5
Q ss_pred cccCCCcCCceEEe
Q 011767 264 TSTCSTCKGLGRII 277 (478)
Q Consensus 264 ~~~C~~C~G~G~~i 277 (478)
...|+.|+=+-.-+
T Consensus 249 s~~C~~CGyr~neV 262 (404)
T 2qkd_A 249 ATNCENCGHRTNEV 262 (404)
T ss_dssp EEECSSSCCEEEEE
T ss_pred EEECCCCCCcccce
Confidence 66788887665444
No 68
>3nyb_B Protein AIR2; polya RNA polymerase, zinc knuckle protein, RNA surveillance binds to TRF4P/AIR2P heterodimer; 2.70A {Saccharomyces cerevisiae}
Probab=21.16 E-value=64 Score=24.91 Aligned_cols=50 Identities=18% Similarity=0.256 Sum_probs=26.0
Q ss_pred ceeccCCCCCCCccCCC--cccccCCcccccEEEcC----CccccCCCcCCceEEe
Q 011767 228 AFVPCDSCHGRGFPADA--KTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRII 277 (478)
Q Consensus 228 ~~~~C~~C~G~G~~~~~--~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~i 277 (478)
+.+.|..|...|-.... ....|-.|...|.+... .-...|-.|+..|.+-
T Consensus 4 k~~~C~~Cg~~GH~~~~Cp~~~rcY~c~~~gh~~~~c~~p~~~~~CYnCG~~GH~~ 59 (83)
T 3nyb_B 4 KKVQCTLCKSKKHSKERCPSIWRAYILVDDNEKAKPKVLPFHTIYCYNCGGKGHFG 59 (83)
T ss_dssp ---CCSSSCCSSSCGGGCGGGTCCCCBC-------------CCCBCSSSSCBSSCG
T ss_pred ccCCCCCCCCCCCccccCCCcccccccccCCcccccccCCCCCCeecccCCCCcCc
Confidence 45679999888865432 12356677777764321 1246788888888754
No 69
>2r0h_A CGL3 lectin; galectin-related, sugar binding protein, chitotriose, chitooligosaccharides; HET: CTO; 1.90A {Coprinus cinereus} PDB: 2r0f_A*
Probab=20.86 E-value=1e+02 Score=27.09 Aligned_cols=43 Identities=12% Similarity=0.208 Sum_probs=31.7
Q ss_pred EEEeCCCCCCCcEEEEcCCCccC----------CCC-----CCCCCcEEEEEEEeCCC
Q 011767 374 QVKIPKGVQPGQLLVLRGKGLAK----------NGL-----FLDHGDQYVRFRVNFPT 416 (478)
Q Consensus 374 ~v~ip~g~~~g~~~~i~g~G~p~----------~~~-----~~~~GdL~v~~~V~~P~ 416 (478)
.+.|+.+.++|+++.|.|.-++. ... ..+.+|+.++|+..|.+
T Consensus 10 ~~~L~~~L~~G~~i~I~G~v~~~~~~~~~~~~~a~rF~INl~~g~~DIalHfNPRF~e 67 (164)
T 2r0h_A 10 TVDLSEPLKDNGIIVFQSDKLDLEPSPNLGPTGIDNTNVNLINAKGDVLLHIGIRRRE 67 (164)
T ss_dssp EEECSSCCCTTCEEEEECSCCCCSCCSCCCTTSSCCEEEEEEETTSCEEEEEEEETTT
T ss_pred eEECCCCccCCCEEEEEEEecCcccccccCCCCCCeEEEEeeeCCCCEEEEEeeccCC
Confidence 68889999999999999986531 110 01235999999999874
No 70
>2wkk_A Galectin-2; sugar-binding protein, secreted, cell WALL, sugar binding, sugar binding protein, beta-galactoside binding lectin, fruiting BODY; HET: GAL NAG FUC; 1.50A {Coprinopsis cinerea} PDB: 1ulc_A* 1ul9_A* 1ule_A* 1ulf_A* 1ulg_A* 1uld_A*
Probab=20.71 E-value=1.3e+02 Score=25.67 Aligned_cols=43 Identities=14% Similarity=0.313 Sum_probs=30.1
Q ss_pred EEEeCCCCCCCcEEEEcCCCccC-CC-----CCCCCCcEEEEEEEeCCC
Q 011767 374 QVKIPKGVQPGQLLVLRGKGLAK-NG-----LFLDHGDQYVRFRVNFPT 416 (478)
Q Consensus 374 ~v~ip~g~~~g~~~~i~g~G~p~-~~-----~~~~~GdL~v~~~V~~P~ 416 (478)
.+.||.+.++|+.++|.|.=.+. .+ -..+.+|+.+||++.|.+
T Consensus 10 ~~~ip~gl~~G~~i~I~G~~~~~~a~rF~INl~~g~~dialHfnpRf~~ 58 (150)
T 2wkk_A 10 QVKLQNDFKPESVAAIRSSAFNSKGGTTVFNFLSAGENILLHISIRPGE 58 (150)
T ss_dssp EEEEEEEECTTCEEEEECSCCCTTCCCEEEEEECTTCCEEEEEEEETTT
T ss_pred ceecCCCCcCCCEEEEEEEECCCCCCEEEEEEecCCCCEEEEEeeecCC
Confidence 57788889999999998842221 11 111235999999999983
No 71
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=20.54 E-value=9.2 Score=40.30 Aligned_cols=57 Identities=21% Similarity=0.423 Sum_probs=37.1
Q ss_pred ccCCCCCCCccCC-----CcccccCCcccccEEEc---------C----C-ccccCCCcCCceEEeeeccccccCC
Q 011767 231 PCDSCHGRGFPAD-----AKTKICSTCRGIGRVTI---------P----P-FTSTCSTCKGLGRIIKDHCMTCKGS 287 (478)
Q Consensus 231 ~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~---------~----~-~~~~C~~C~G~G~~i~~~C~~C~G~ 287 (478)
.|..|++...... .....|-.|+....... . . -...|..|+..=......|..|+..
T Consensus 13 ~C~~CH~~~~~~~~~~~~~~~~~C~~CH~~~~~~~~~~~~~~~~~h~~H~~~~~~C~~CH~~h~~~~~~C~~CH~~ 88 (571)
T 1y0p_A 13 ECDSCHTPDGELSNDSLTYENTQCVSCHGTLAEVAETTKHEHYNAHASHFPGEVACTSCHSAHEKSMVYCDSCHSF 88 (571)
T ss_dssp CGGGTSCTTCCCCCTTCHHHHHHHHHHHCCHHHHHTTSCCSSCCTTSCSCCSCCCGGGTCCSSSCBCCGGGGTCCC
T ss_pred ChhhcCCCcccccccccccccchhhhhCcChhhcccccccccCCccccccCCCCCccccCccccCCCccccccChh
Confidence 7999998764322 13568999997532110 0 0 1457999997754456789999975
Done!