Query 011768
Match_columns 478
No_of_seqs 133 out of 513
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 14:55:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011768.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011768hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1eyb_A Homogentisate 1,2-dioxy 100.0 3E-173 1E-177 1340.7 37.2 444 7-458 11-465 (471)
2 3d0j_A Uncharacterized protein 97.8 5.1E-05 1.7E-09 68.7 8.4 86 133-225 14-111 (140)
3 3ibm_A Cupin 2, conserved barr 97.7 0.0004 1.4E-08 62.9 12.3 113 111-224 13-131 (167)
4 3myx_A Uncharacterized protein 97.7 0.0009 3.1E-08 65.1 15.4 100 113-224 18-117 (238)
5 3lwc_A Uncharacterized protein 97.6 0.00018 6E-09 62.1 7.7 72 150-223 40-111 (119)
6 1v70_A Probable antibiotics sy 97.5 0.00064 2.2E-08 53.8 9.5 74 150-223 28-102 (105)
7 3l2h_A Putative sugar phosphat 97.4 0.0024 8.3E-08 56.3 12.8 86 149-234 45-135 (162)
8 3d82_A Cupin 2, conserved barr 97.4 0.00041 1.4E-08 55.4 7.1 56 167-223 46-101 (102)
9 2opk_A Hypothetical protein; p 97.3 0.0009 3.1E-08 56.4 9.2 48 166-213 48-97 (112)
10 2gu9_A Tetracenomycin polyketi 97.3 0.0011 3.9E-08 53.5 9.4 57 167-223 40-97 (113)
11 2i45_A Hypothetical protein; n 97.2 0.00033 1.1E-08 57.5 5.2 55 169-224 45-101 (107)
12 1yfu_A 3-hydroxyanthranilate-3 97.2 0.00079 2.7E-08 62.9 8.3 57 168-224 52-112 (174)
13 4e2g_A Cupin 2 conserved barre 97.2 0.0029 9.9E-08 52.9 10.8 71 150-221 41-111 (126)
14 3bcw_A Uncharacterized protein 97.2 0.00031 1.1E-08 61.3 4.6 71 149-221 48-119 (123)
15 1fi2_A Oxalate oxidase, germin 97.1 0.0079 2.7E-07 55.6 13.8 80 142-221 63-152 (201)
16 1yhf_A Hypothetical protein SP 97.1 0.0037 1.3E-07 51.3 10.1 73 150-224 40-112 (115)
17 4h7l_A Uncharacterized protein 97.1 0.0019 6.5E-08 59.3 9.1 81 134-223 35-117 (157)
18 4axo_A EUTQ, ethanolamine util 97.1 0.00099 3.4E-08 60.6 6.9 68 150-221 66-133 (151)
19 2oa2_A BH2720 protein; 1017534 97.1 0.004 1.4E-07 54.4 10.7 72 150-221 43-121 (148)
20 2b8m_A Hypothetical protein MJ 97.0 0.0046 1.6E-07 51.2 10.5 56 168-223 44-101 (117)
21 3ht1_A REMF protein; cupin fol 97.0 0.0039 1.3E-07 52.9 10.1 58 167-224 55-115 (145)
22 2o8q_A Hypothetical protein; c 97.0 0.0013 4.3E-08 56.0 6.6 53 167-219 60-113 (134)
23 4i4a_A Similar to unknown prot 97.0 0.0059 2E-07 51.1 10.7 55 169-223 52-107 (128)
24 3jzv_A Uncharacterized protein 97.0 0.0058 2E-07 55.5 11.2 104 114-224 16-127 (166)
25 1o5u_A Novel thermotoga mariti 96.9 0.0011 3.7E-08 55.8 5.6 54 168-221 46-100 (101)
26 2fqp_A Hypothetical protein BP 96.9 0.0055 1.9E-07 49.7 9.3 57 168-224 35-95 (97)
27 1vj2_A Novel manganese-contain 96.8 0.0048 1.6E-07 52.3 9.0 58 167-224 64-122 (126)
28 3i7d_A Sugar phosphate isomera 96.8 0.0069 2.3E-07 54.3 10.5 76 149-224 42-121 (163)
29 2pfw_A Cupin 2, conserved barr 96.8 0.0026 9E-08 52.2 6.7 55 167-222 50-104 (116)
30 3es4_A Uncharacterized protein 96.7 0.0056 1.9E-07 53.6 8.7 69 150-221 42-112 (116)
31 3fjs_A Uncharacterized protein 96.7 0.0042 1.4E-07 52.3 7.5 54 167-221 52-105 (114)
32 2pyt_A Ethanolamine utilizatio 96.7 0.0029 9.9E-08 55.6 6.7 54 167-221 71-124 (133)
33 3cew_A Uncharacterized cupin p 96.7 0.0082 2.8E-07 50.4 9.2 58 167-224 44-102 (125)
34 2q30_A Uncharacterized protein 96.7 0.012 4.1E-07 47.5 9.8 47 172-219 55-103 (110)
35 1juh_A Quercetin 2,3-dioxygena 96.6 0.0031 1.1E-07 63.4 7.4 57 167-223 268-325 (350)
36 1lr5_A Auxin binding protein 1 96.6 0.016 5.3E-07 51.2 10.8 75 149-224 40-125 (163)
37 2bnm_A Epoxidase; oxidoreducta 96.6 0.013 4.5E-07 52.8 10.4 56 166-221 135-196 (198)
38 1zvf_A 3-hydroxyanthranilate 3 96.5 0.0057 1.9E-07 57.2 7.9 59 165-224 48-114 (176)
39 2vpv_A Protein MIF2, MIF2P; nu 96.5 0.0052 1.8E-07 56.7 7.5 58 166-223 105-163 (166)
40 2ozj_A Cupin 2, conserved barr 96.5 0.0081 2.8E-07 49.5 7.9 56 168-224 55-110 (114)
41 3myx_A Uncharacterized protein 96.5 0.016 5.5E-07 56.3 11.0 87 129-221 150-237 (238)
42 1dgw_A Canavalin; duplicated s 96.5 0.0083 2.8E-07 54.7 8.5 46 168-213 58-107 (178)
43 2qnk_A 3-hydroxyanthranilate 3 96.4 0.0072 2.5E-07 60.3 8.1 59 165-224 45-107 (286)
44 3h8u_A Uncharacterized conserv 96.4 0.014 4.9E-07 48.6 8.8 55 167-221 56-112 (125)
45 1y3t_A Hypothetical protein YX 96.3 0.015 5.2E-07 56.4 10.0 74 149-222 45-118 (337)
46 3kgz_A Cupin 2 conserved barre 96.3 0.016 5.4E-07 52.1 9.4 56 169-224 62-118 (156)
47 2xlg_A SLL1785 protein, CUCA; 96.3 0.021 7.1E-07 55.1 10.5 54 165-218 58-132 (239)
48 2vqa_A SLL1358 protein, MNCA; 96.3 0.03 1E-06 55.3 11.8 57 165-221 67-129 (361)
49 1vr3_A Acireductone dioxygenas 96.2 0.0099 3.4E-07 56.1 7.5 55 169-224 102-161 (191)
50 4b29_A Dimethylsulfoniopropion 96.2 0.024 8.1E-07 54.6 10.0 108 115-223 94-205 (217)
51 1y3t_A Hypothetical protein YX 96.1 0.062 2.1E-06 52.0 13.0 57 165-221 233-289 (337)
52 2f4p_A Hypothetical protein TM 96.1 0.045 1.5E-06 48.0 10.7 74 148-222 46-121 (147)
53 1o4t_A Putative oxalate decarb 96.1 0.03 1E-06 48.0 9.3 51 171-221 78-129 (133)
54 1rc6_A Hypothetical protein YL 96.0 0.052 1.8E-06 51.8 11.6 78 149-226 178-257 (261)
55 3rns_A Cupin 2 conserved barre 95.9 0.041 1.4E-06 51.6 10.4 67 151-219 38-104 (227)
56 1x82_A Glucose-6-phosphate iso 95.7 0.028 9.6E-07 51.7 7.9 53 170-222 95-153 (190)
57 2ozi_A Hypothetical protein RP 95.6 0.013 4.6E-07 48.8 4.9 59 168-226 35-97 (98)
58 3rns_A Cupin 2 conserved barre 95.5 0.057 2E-06 50.6 9.4 71 150-221 153-223 (227)
59 2arc_A ARAC, arabinose operon 95.5 0.025 8.6E-07 48.4 6.4 56 169-224 36-93 (164)
60 3es1_A Cupin 2, conserved barr 95.3 0.12 4.2E-06 47.7 11.0 61 168-229 96-158 (172)
61 2vqa_A SLL1358 protein, MNCA; 95.3 0.14 4.8E-06 50.6 12.0 75 149-223 233-313 (361)
62 1juh_A Quercetin 2,3-dioxygena 95.3 0.044 1.5E-06 55.1 8.4 56 166-221 66-126 (350)
63 1sq4_A GLXB, glyoxylate-induce 95.2 0.032 1.1E-06 54.4 7.0 56 168-223 87-143 (278)
64 3gbg_A TCP pilus virulence reg 95.2 0.063 2.1E-06 50.5 8.7 76 147-224 4-87 (276)
65 3h7j_A Bacilysin biosynthesis 95.1 0.033 1.1E-06 52.7 6.5 55 167-221 162-217 (243)
66 1sef_A Conserved hypothetical 95.0 0.14 4.8E-06 49.3 10.9 82 149-230 181-264 (274)
67 3h7j_A Bacilysin biosynthesis 94.9 0.038 1.3E-06 52.3 6.5 54 168-221 51-106 (243)
68 1y9q_A Transcriptional regulat 94.8 0.049 1.7E-06 49.0 6.7 49 168-216 123-172 (192)
69 1j58_A YVRK protein; cupin, de 94.6 0.25 8.4E-06 49.4 11.7 75 149-223 256-336 (385)
70 1j58_A YVRK protein; cupin, de 94.5 0.12 4E-06 51.8 9.0 64 149-213 78-146 (385)
71 2d5f_A Glycinin A3B4 subunit; 94.4 0.088 3E-06 55.9 8.2 78 133-211 348-434 (493)
72 1uij_A Beta subunit of beta co 94.3 0.073 2.5E-06 55.2 7.4 57 168-224 66-126 (416)
73 1zrr_A E-2/E-2' protein; nicke 94.3 0.023 7.8E-07 52.8 3.1 44 170-213 99-146 (179)
74 1rc6_A Hypothetical protein YL 94.1 0.069 2.4E-06 50.9 6.2 56 168-223 78-134 (261)
75 2d40_A Z3393, putative gentisa 93.9 0.36 1.2E-05 48.6 11.3 73 148-221 98-172 (354)
76 1fxz_A Glycinin G1; proglycini 93.8 0.35 1.2E-05 51.1 11.5 78 134-211 320-405 (476)
77 1sfn_A Conserved hypothetical 93.8 0.046 1.6E-06 52.1 4.4 52 171-223 68-119 (246)
78 3bu7_A Gentisate 1,2-dioxygena 93.8 0.35 1.2E-05 50.0 11.3 88 133-223 275-368 (394)
79 3ebr_A Uncharacterized RMLC-li 93.8 0.21 7.3E-06 45.2 8.5 99 111-221 11-113 (159)
80 2ea7_A 7S globulin-1; beta bar 93.6 0.13 4.3E-06 53.8 7.4 53 168-220 78-136 (434)
81 1sef_A Conserved hypothetical 93.4 0.16 5.4E-06 48.9 7.4 57 167-223 80-137 (274)
82 3ksc_A LEGA class, prolegumin; 93.0 0.34 1.2E-05 51.7 9.8 47 343-390 365-421 (496)
83 3c3v_A Arachin ARAH3 isoform; 93.0 0.35 1.2E-05 51.7 9.9 77 134-211 354-439 (510)
84 1uij_A Beta subunit of beta co 92.9 0.31 1E-05 50.5 9.1 88 134-223 231-340 (416)
85 2o1q_A Putative acetyl/propion 92.9 0.061 2.1E-06 47.5 3.3 86 112-208 12-103 (145)
86 3qac_A 11S globulin SEED stora 92.7 0.43 1.5E-05 50.5 10.0 47 343-390 330-386 (465)
87 3lag_A Uncharacterized protein 92.4 0.14 4.7E-06 42.3 4.7 58 166-223 33-94 (98)
88 2ea7_A 7S globulin-1; beta bar 92.2 0.46 1.6E-05 49.5 9.4 61 160-222 277-355 (434)
89 4e2q_A Ureidoglycine aminohydr 92.1 0.17 5.7E-06 49.9 5.6 57 167-224 86-143 (266)
90 3fz3_A Prunin; TREE NUT allerg 92.1 0.27 9.3E-06 52.8 7.7 76 134-210 376-460 (531)
91 3nw4_A Gentisate 1,2-dioxygena 92.0 1 3.5E-05 46.2 11.5 89 130-222 255-349 (368)
92 3s7i_A Allergen ARA H 1, clone 91.9 0.24 8.1E-06 51.6 6.8 45 169-213 62-110 (418)
93 2cav_A Protein (canavalin); vi 91.9 0.29 1E-05 51.2 7.5 53 168-220 103-161 (445)
94 2phl_A Phaseolin; plant SEED s 91.9 0.66 2.3E-05 47.9 10.0 72 148-221 237-321 (397)
95 2d5f_A Glycinin A3B4 subunit; 91.8 0.46 1.6E-05 50.5 9.0 87 134-222 28-147 (493)
96 1fxz_A Glycinin G1; proglycini 91.8 0.37 1.3E-05 50.9 8.2 49 343-392 345-403 (476)
97 3ksc_A LEGA class, prolegumin; 91.8 0.65 2.2E-05 49.5 10.1 88 134-224 340-436 (496)
98 2e9q_A 11S globulin subunit be 91.8 0.27 9.3E-06 51.8 7.1 47 343-390 329-385 (459)
99 2d40_A Z3393, putative gentisa 90.8 0.62 2.1E-05 46.9 8.4 56 163-220 281-336 (354)
100 2e9q_A 11S globulin subunit be 90.6 0.84 2.9E-05 48.0 9.4 78 133-211 303-389 (459)
101 3kgl_A Cruciferin; 11S SEED gl 90.4 1.1 3.7E-05 47.5 10.0 90 134-226 305-403 (466)
102 3qac_A 11S globulin SEED stora 90.2 0.76 2.6E-05 48.6 8.7 89 134-225 305-402 (465)
103 3cjx_A Protein of unknown func 90.0 0.7 2.4E-05 42.2 7.2 88 112-213 13-104 (165)
104 3c3v_A Arachin ARAH3 isoform; 89.9 0.7 2.4E-05 49.4 8.2 49 343-392 379-437 (510)
105 3o14_A Anti-ecfsigma factor, C 89.6 0.44 1.5E-05 45.4 5.8 93 111-220 13-107 (223)
106 3bu7_A Gentisate 1,2-dioxygena 89.4 1.8 6.3E-05 44.7 10.7 66 145-211 118-184 (394)
107 1sfn_A Conserved hypothetical 89.2 3 0.0001 39.5 11.2 78 147-226 162-242 (246)
108 3nw4_A Gentisate 1,2-dioxygena 88.9 1.1 3.7E-05 46.1 8.5 71 149-220 102-174 (368)
109 2phl_A Phaseolin; plant SEED s 88.8 0.55 1.9E-05 48.6 6.2 45 169-213 70-124 (397)
110 2qnk_A 3-hydroxyanthranilate 3 87.9 1.3 4.3E-05 44.3 7.9 69 150-223 209-277 (286)
111 3s7i_A Allergen ARA H 1, clone 87.9 1 3.5E-05 46.9 7.6 74 140-215 251-357 (418)
112 2q1z_B Anti-sigma factor CHRR, 87.2 0.91 3.1E-05 42.0 6.1 54 151-211 128-181 (195)
113 1xru_A 4-deoxy-L-threo-5-hexos 83.7 1.7 5.9E-05 43.3 6.4 70 160-231 69-141 (282)
114 2cav_A Protein (canavalin); vi 83.1 2.1 7.2E-05 44.8 7.2 79 133-212 262-359 (445)
115 1ywk_A 4-deoxy-L-threo-5-hexos 82.7 1.4 4.7E-05 44.1 5.3 62 169-231 77-141 (289)
116 2qjv_A Uncharacterized IOLB-li 82.0 5.6 0.00019 39.3 9.3 64 166-231 44-117 (270)
117 1sq4_A GLXB, glyoxylate-induce 79.6 4 0.00014 39.5 7.3 81 148-230 189-272 (278)
118 3kgl_A Cruciferin; 11S SEED gl 78.1 4.3 0.00015 42.9 7.5 47 343-390 330-386 (466)
119 4e2q_A Ureidoglycine aminohydr 77.6 11 0.00037 37.0 9.7 75 147-221 183-258 (266)
120 2y0o_A Probable D-lyxose ketol 74.1 3.7 0.00013 38.1 5.1 52 171-224 80-152 (175)
121 3gw6_A Endo-N-acetylneuraminid 65.9 4.6 0.00016 40.1 4.0 44 129-172 41-85 (275)
122 1yud_A Hypothetical protein SO 65.5 31 0.0011 31.8 9.3 72 150-224 50-133 (170)
123 3kmh_A D-lyxose isomerase; cup 64.6 28 0.00095 34.1 9.1 69 150-224 139-207 (246)
124 3dl3_A Tellurite resistance pr 64.6 12 0.00041 32.8 6.0 49 174-224 41-97 (119)
125 1pmi_A PMI, phosphomannose iso 61.9 25 0.00085 36.7 8.9 47 166-212 374-423 (440)
126 1qwr_A Mannose-6-phosphate iso 61.5 14 0.00047 36.8 6.6 44 167-210 265-309 (319)
127 3bb6_A Uncharacterized protein 61.4 15 0.0005 32.6 6.0 32 192-224 68-99 (127)
128 3o14_A Anti-ecfsigma factor, C 60.2 9.6 0.00033 36.1 5.0 83 133-228 133-215 (223)
129 3bal_A Acetylacetone-cleaving 58.0 12 0.0004 34.0 4.9 86 111-209 13-106 (153)
130 2wfp_A Mannose-6-phosphate iso 55.5 27 0.00092 35.8 7.7 59 149-210 323-382 (394)
131 1zx5_A Mannosephosphate isomer 52.6 20 0.00069 35.3 6.0 56 150-210 230-287 (300)
132 2vec_A YHAK, pirin-like protei 50.9 1.2E+02 0.004 29.3 11.1 87 134-223 162-254 (256)
133 1dgw_A Canavalin; duplicated s 49.5 3.3 0.00011 37.3 -0.1 47 343-391 48-102 (178)
134 2qdr_A Uncharacterized protein 48.1 35 0.0012 34.1 6.8 97 114-226 62-164 (303)
135 3ju4_A Endo-N-acetylneuraminid 42.5 22 0.00075 37.9 4.6 46 128-173 589-635 (670)
136 1qwr_A Mannose-6-phosphate iso 41.9 19 0.00064 35.8 3.9 57 189-253 158-218 (319)
137 2oyz_A UPF0345 protein VPA0057 41.1 1E+02 0.0036 25.9 7.8 57 164-222 34-92 (94)
138 1dgw_Y Canavalin; duplicated s 39.1 12 0.00041 31.3 1.7 22 192-213 9-30 (93)
139 2gm6_A Cysteine dioxygenase ty 36.6 89 0.003 29.1 7.5 88 134-226 67-167 (208)
140 3hsh_A Endostatin, collagen al 36.1 6.5 0.00022 30.3 -0.4 51 153-203 6-56 (56)
141 2p17_A Pirin-like protein; GK1 35.7 2.3E+02 0.0078 27.5 10.5 84 135-223 147-242 (277)
142 4gjz_A Lysine-specific demethy 35.1 24 0.00083 31.6 3.2 21 191-211 203-223 (235)
143 3st7_A Capsular polysaccharide 34.7 65 0.0022 30.9 6.4 45 167-211 289-341 (369)
144 1tq5_A Protein YHHW; bicupin, 33.0 2E+02 0.0068 27.4 9.4 82 136-224 142-229 (242)
145 3n3f_A Collagen alpha-1(XV) ch 26.4 8.8 0.0003 29.4 -1.1 50 153-202 4-53 (54)
146 1zx5_A Mannosephosphate isomer 26.3 47 0.0016 32.7 3.8 49 187-253 156-205 (300)
147 1vp6_A CNBD, cyclic-nucleotide 26.0 63 0.0022 25.8 4.0 31 168-199 49-79 (138)
148 3bpz_A Potassium/sodium hyperp 25.2 57 0.002 28.5 3.8 31 168-198 110-141 (202)
149 2ptm_A Hyperpolarization-activ 23.4 80 0.0027 27.4 4.4 44 151-198 95-141 (198)
150 3mdp_A Cyclic nucleotide-bindi 22.2 87 0.003 24.9 4.1 19 168-186 44-62 (142)
151 3hqx_A UPF0345 protein aciad03 21.7 3.9E+02 0.013 23.1 8.5 58 165-224 51-110 (111)
152 3eqe_A Putative cystein deoxyg 21.5 4.5E+02 0.015 23.7 12.9 102 115-226 42-153 (171)
153 1vrb_A Putative asparaginyl hy 21.3 55 0.0019 32.6 3.2 23 190-212 219-241 (342)
154 3mlq_E Transcription-repair co 21.2 78 0.0027 24.9 3.4 16 170-185 5-20 (71)
155 2d93_A RAP guanine nucleotide 21.2 59 0.002 26.2 2.9 22 169-190 56-77 (134)
156 2wfp_A Mannose-6-phosphate iso 20.6 79 0.0027 32.3 4.3 32 188-225 239-270 (394)
No 1
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=100.00 E-value=3.4e-173 Score=1340.74 Aligned_cols=444 Identities=57% Similarity=1.061 Sum_probs=388.5
Q ss_pred ccccccccccC--CCCCCCCcccccCCCcccccc--cCCCCCCCCCCCCCCCCCceeccccCccccCCCCCCCceeeccc
Q 011768 7 HQSSSLIRKTD--GEDFSDLNYESGFGNSFSSEA--IDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRI 82 (478)
Q Consensus 7 ~~~~~~~~~~~--~~~~~~~~Y~~Gfgn~~~sEa--~pGaLP~~qnspq~~~~gLYaEqlsGtaFt~pr~~n~~swlYRi 82 (478)
|.||--+.+.+ --.+++|.||+||||+|+||| +|||||+||||||+|+||||+||||||+||+||++|+|||||||
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~y~~Gfgn~~~sEavr~pgalP~gqnsPq~~~~gLYaEqLsGtaFtapr~~n~rSwLYri 90 (471)
T 1eyb_A 11 HHSSGHIDDDDKHMGSMAELKYISGFGNECSSEDPRCPGSLPEGQNNPQVCPYNLYAEQLSGSAFTCPRSTNKRSWLYRI 90 (471)
T ss_dssp -----------------CCCCEEECTTCCEEEECTTSTTCSCSSCSCCSSCGGGCEEEEEESSCTTSCGGGCCEEEEEES
T ss_pred ccccCCcCccccccCCCcchhhhhhhcccChhhHhhCCCCCcccccCcccCCCccchhhhcCCcccCccccccceeeecc
Confidence 45555555544 225678999999999999999 99999999999999999999999999999999999999999999
Q ss_pred CCCCCcCCCccCCCCCCCccccCCCCCCCCCCCccccCCCCCCCC---CCCcccceeeeeecCCcccccccEEEEEEeCC
Q 011768 83 KPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDS---PTDFIDGLYTICGAGSSFLRHGYAIHMYTANK 159 (478)
Q Consensus 83 rPs~~h~~~~~~~~~~~~~~~~~~~~~~~~~P~~lrW~p~~~p~~---~~Dfv~gl~tl~g~gD~~~~~G~ai~~y~~~~ 159 (478)
|||++|++|++... ......+... ...|+||||+|+++|++ ++|||+||+|||||||+++|+|++||+|+||+
T Consensus 91 rPs~~h~~~~~~~~--~~~~~~~~~~--~~~p~qLrw~p~~ip~~~~~~~Dfv~Gl~tl~gngD~~~~~G~aI~~y~~n~ 166 (471)
T 1eyb_A 91 LPSVSHKPFESIDE--GHVTHNWDEV--DPDPNQLRWKPFEIPKASQKKVDFVSGLHTLCGAGDIKSNNGLAIHIFLCNT 166 (471)
T ss_dssp SCTTCSCCCEECCC--TBCCCCGGGS--CCCCSCEEECSCCCCCTTTCCCCTTTTEEEEEEESCGGGTCCEEEEEEEECS
T ss_pred CCcccccccccccc--cccCCccccc--CCCccccccCCCCCCccccCCCCcccchhheeccCCcccccceEEEEEeCCC
Confidence 99999999988752 1111211112 24599999999999853 78999999999999999999999999999999
Q ss_pred CCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECCCCCeeEEEEEEcCCeeeeCCCCCCCCC
Q 011768 160 SMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGAN 239 (478)
Q Consensus 160 sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~~~~~~~LPelGpiG~n 239 (478)
||.+++|||+|||||||||+|+|+|+||||+|+|+|||||||||||+|||++++ ++||||||++|+||+||||||||+|
T Consensus 167 sM~~~~f~NaDGD~Livpq~G~l~i~TEfG~L~v~pgei~VIPRGi~frv~l~~-p~Rgyi~E~~g~~f~LP~lGpiGan 245 (471)
T 1eyb_A 167 SMENRCFYNSDGDFLIVPQKGNLLIYTEFGKMLVQPNEICVIQRGMRFSIDVFE-ETRGYILEVYGVHFELPDLGPIGAN 245 (471)
T ss_dssp CCCSEEEEESSEEEEEEEEESCEEEEETTEEEEECTTEEEEECTTCCEEEECSS-SEEEEEEEEESCCEECCCCGGGTTS
T ss_pred CcccceeecCCCCEEEEEEeCCEEEEEecccEEeccCCEEEECCccEEEEeeCC-CceEEEEEccCCccccccccccccC
Confidence 998889999999999999999999999999999999999999999999999987 9999999999999999999999999
Q ss_pred CCCCCCCccCCccccccccccc--EEEEEEECCceEEEEcCCCCCeEeeecCCccceeeccCCcccccccccccCCCCcc
Q 011768 240 GLAAPRDFLVPTAWFEEGSRLG--YTIVQKFGGELFTARQDFSPFNVVAWHGNYVPYKYDLSKFCPFNTVLVDHGDPSIN 317 (478)
Q Consensus 240 glan~RDf~~P~a~~e~~~~~~--~~vv~K~~g~l~~~~~~hsPfDVVaWhGn~~Pykydl~~F~pi~svs~dH~dPSi~ 317 (478)
||||+|||++|+|+|+++ +++ |+||+|++|+||+++|+||||||||||||||||||||+||+||||||+||+|||||
T Consensus 246 glan~RDF~~PvA~~ed~-~~~~~~~vv~K~~G~l~~~~~~hsPfDVVaWhGn~~PYkydl~~F~pI~svs~dH~dPSIf 324 (471)
T 1eyb_A 246 GLANPRDFLIPIAWYEDR-QVPGGYTVINKYQGKLFAAKQDVSPFNVVAWHGNYTPYKYNLKNFMVINSVAFDHADPSIF 324 (471)
T ss_dssp CBSCGGGEEEECCCCCCC-EEEEEEEEEEEETTEEEEEEEEECSCCEEEEEESCCCEEEEGGGCBCCCCSSSSCCCGGGG
T ss_pred CccChhhccCcccccccc-CCCccEEEEEEeCCeeEEEecCCCCceEEeEcCcccCeEechHHcccccccccccCCCCcc
Confidence 999999999999999986 677 99999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeecCCCCCceEEEeeeeCCccccCCCCCCCCCCCCCcccccceeeecccccccCCcCCCeeeeecCCCCCCCChHHH
Q 011768 318 TVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTY 397 (478)
Q Consensus 318 tvlta~s~~pG~av~dFviF~PRw~~~e~TfRpPYyHrNv~sE~mg~i~G~y~ar~~gf~pG~~SLHp~g~pHGP~~~~~ 397 (478)
|||||||++|||||||||||||||+++|+||||||||||+||||||||+|+|+||++||+|||+||||+|+|||||+++|
T Consensus 325 tVltaps~~pg~av~dFViFpPRw~v~e~TfrpPyyHrNv~SEfmgli~G~y~ak~~Gf~pGg~SLH~~~~pHGPd~~~~ 404 (471)
T 1eyb_A 325 TVLTAKSVRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPGGGSLHSTMTPHGPDADCF 404 (471)
T ss_dssp EEEEEECSSTTCEEEEEEEECSEEECCSSSCCSCCCBCCSCEEEEEECCC--------CCTTCEEEECTTCCBCCCHHHH
T ss_pred eEEEccCCCCCceEEeEeecCCccCCCCCccCCCCCccchhhhhhhhccccccccccCcCCCceeccCCCcCCCCChhhh
Confidence 99999999999999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred HHHHhcCCCCCCceecc-ceeEEeeeccCcccchhhhcCC-CCChhhhhchhhhhcCCCCCcc
Q 011768 398 EATIARGSEAGPYKITD-TMAFMFESCLIPRICPWALESP-FMDHDYYRCWIGLRSHFSYEEA 458 (478)
Q Consensus 398 e~a~~~~~~l~P~~~~~-~lAfMfET~~~l~~T~~A~~~~-~~d~~Y~~~W~~l~~~f~~~~~ 458 (478)
|+|+++ +|+|+|+++ ||||||||++||++|+||++++ .+|++|++||++|+++|+++.+
T Consensus 405 E~a~~~--~l~p~k~~d~~lAfMfET~~pl~~T~~Al~~~~~~d~~Y~~~W~~l~~~f~~~~~ 465 (471)
T 1eyb_A 405 EKASKV--KLAPERIADGTMAFMFESSLSLAVTKWGLKASRCLDENYHKCWEPLKSHFTPNSR 465 (471)
T ss_dssp HHHHHS--CCCCEEESTTCCEEEEEESSCCEECHHHHHHCC------------CCCCCCTTCC
T ss_pred HHhhcc--ccCceecCCceEEEEEEccccccccHHHHhCccccCccHHHhhhhhhccCCCCCc
Confidence 999999 999999976 9999999999999999999976 6899999999999999997544
No 2
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=97.81 E-value=5.1e-05 Score=68.72 Aligned_cols=86 Identities=8% Similarity=0.088 Sum_probs=66.4
Q ss_pred cceeeeeecCCcccccccEEEEE--EeCCCC--CCcceecCCCCEEEEEEeCcEEEEee--------ceeeeecCCcEEE
Q 011768 133 DGLYTICGAGSSFLRHGYAIHMY--TANKSM--DNCAFCNADGDFLVVPQKGRLWIATE--------CGKLEVSPGEIAV 200 (478)
Q Consensus 133 ~gl~tl~g~gD~~~~~G~ai~~y--~~~~sM--~~~~f~NaDGD~Li~pq~G~l~l~TE--------fG~L~v~pGd~vV 200 (478)
.|.+.+.-++ +-.+.++ ..+-+. -...=+..|-|||+++.+|+++|... .|...++|||+.|
T Consensus 14 eGy~~~~~~~------~W~Va~~n~~~~~~~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yv 87 (140)
T 3d0j_A 14 EGILCVYKNE------KWLVCIKNWKPDNDIEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYN 87 (140)
T ss_dssp SSEEEEEECS------SEEEEEEECCGGGBTTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEE
T ss_pred CceeEEEEcC------CEEEEEEeccCcCCcccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEE
Confidence 4677777666 3333444 444222 12255788999999999999999988 7899999999999
Q ss_pred EcceeEEEEECCCCCeeEEEEEEcC
Q 011768 201 LPQGFRFAVSLPDGPSRGYIAEIFG 225 (478)
Q Consensus 201 IPRGi~frv~l~~g~~rgyi~E~~~ 225 (478)
||||+-++-.. ...++.+++|.-+
T Consensus 88 VPkGveH~p~a-~~e~~vLLiEp~n 111 (140)
T 3d0j_A 88 VPAECWFYSIT-QKDTKMMYVQDSN 111 (140)
T ss_dssp ECTTCEEEEEE-CTTCEEEEEEESC
T ss_pred eCCCccCcccC-CCceEEEEEEeCC
Confidence 99999999887 5689999999753
No 3
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=97.68 E-value=0.0004 Score=62.85 Aligned_cols=113 Identities=9% Similarity=0.064 Sum_probs=73.8
Q ss_pred CCCCCccccCCCCCC---CCCCCcccc-eeeeeecCCcccccccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEe
Q 011768 111 YTTPTQLRWKPVDIP---DSPTDFIDG-LYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIAT 186 (478)
Q Consensus 111 ~~~P~~lrW~p~~~p---~~~~Dfv~g-l~tl~g~gD~~~~~G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~T 186 (478)
.+.++.++|+..+.. .+...|-.. ++.|.+..+.....++.+.++.....-....-+. +.++++++.+|++.+..
T Consensus 13 iv~~~~~~W~~~~~~~~~~~~~~~~g~~~~~L~~~~~g~~~~~~~~~~~~l~pG~~~~~H~H-~~~E~~~Vl~G~~~~~i 91 (167)
T 3ibm_A 13 VLRERDYRWEGTEEEAYKAEGTHFSGARRQTLVGRPAGQEAPAFETRYFEVEPGGYTTLERH-EHTHVVMVVRGHAEVVL 91 (167)
T ss_dssp EECEETTEETTCCCC---------CCEEEEEEECTTTTCCSSSEEEEEEEECTTCBCCCBBC-SSCEEEEEEESEEEEEE
T ss_pred eeecCCcccccceeeeccCCCCcCCCcEEEEEECCCCCCCCCcEEEEEEEECCCCCCCCccC-CCcEEEEEEeCEEEEEE
Confidence 357889999998862 122222222 3344444432123355666655443221223344 68999999999999999
Q ss_pred eceeeeecCCcEEEEcceeEEEEEC-C-CCCeeEEEEEEc
Q 011768 187 ECGKLEVSPGEIAVLPQGFRFAVSL-P-DGPSRGYIAEIF 224 (478)
Q Consensus 187 EfG~L~v~pGd~vVIPRGi~frv~l-~-~g~~rgyi~E~~ 224 (478)
+-....+++||+++||.|+.+++.- . +.+++.+++-..
T Consensus 92 ~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~ 131 (167)
T 3ibm_A 92 DDRVEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDS 131 (167)
T ss_dssp TTEEEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEES
T ss_pred CCEEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeC
Confidence 9999999999999999999999864 3 446776666554
No 4
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.68 E-value=0.0009 Score=65.09 Aligned_cols=100 Identities=15% Similarity=0.107 Sum_probs=70.8
Q ss_pred CCCccccCCCCCCCCCCCcccceeeeeecCCcccccccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeeceeee
Q 011768 113 TPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLE 192 (478)
Q Consensus 113 ~P~~lrW~p~~~p~~~~Dfv~gl~tl~g~gD~~~~~G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~ 192 (478)
.+..+| |-++. ..|...+.+.+.+.++ .++++.++.+..+ .....-.+||++++.+|++.|+..-..+.
T Consensus 18 ~~~~f~--~~~~~--~~dp~~~~r~~~~~~~----~~~~~G~~~~~g~---~~v~~~p~dE~~~VleG~~~lt~~g~~~~ 86 (238)
T 3myx_A 18 VGTEFT--TGPID--AHDPFDSGRRTAFVDE----QGIAAGIVEFGTA---LSVEAYPYTEMLVMHRGSVTLTSGTDSVT 86 (238)
T ss_dssp CSCCCE--ESCSS--TTCSCSTTEEEEEECT----TSEEEEEEEECSE---EEESSCSSEEEEEEEESEEEEEETTEEEE
T ss_pred CCcCcc--ccccC--CCCccccceEEecCCC----CCeEEEEEEeccc---cccccCCCcEEEEEEEeEEEEECCCeEEE
Confidence 345555 65553 3344445555566664 4677788887322 13334557999999999999999888999
Q ss_pred ecCCcEEEEcceeEEEEECCCCCeeEEEEEEc
Q 011768 193 VSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 224 (478)
Q Consensus 193 v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~~ 224 (478)
++|||.+|||+|+.++++..+ +.|.+.|=..
T Consensus 87 ~~~Gd~~~ip~G~~~~w~~~~-~~~~~y~~~~ 117 (238)
T 3myx_A 87 LSTGESAVIGRGTQVRIDAQP-ESLWAFCAST 117 (238)
T ss_dssp EETTCEEEECTTCCEEEEECT-TEEEEEEEEC
T ss_pred EcCCCEEEECCCCEEEEEecC-CeEEEEEecc
Confidence 999999999999999999855 5555544433
No 5
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=97.56 E-value=0.00018 Score=62.07 Aligned_cols=72 Identities=17% Similarity=0.186 Sum_probs=55.0
Q ss_pred cEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECCCCCeeEEEEEE
Q 011768 150 YAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEI 223 (478)
Q Consensus 150 ~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~ 223 (478)
+.+.++....-. +.-...+.||++++.+|++.|+.+--...+++||.++||+|+.++++-.+.++|.+.+=.
T Consensus 40 ~~~~~~~~~pG~--~~~~H~~~~E~~~Vl~G~~~~~~~g~~~~l~~GD~v~ip~g~~H~~~~~~~~~~~l~v~~ 111 (119)
T 3lwc_A 40 ITIGYGRYAPGQ--SLTETMAVDDVMIVLEGRLSVSTDGETVTAGPGEIVYMPKGETVTIRSHEEGALTAYVTY 111 (119)
T ss_dssp CEEEEEEECTTC--EEEEECSSEEEEEEEEEEEEEEETTEEEEECTTCEEEECTTCEEEEEEEEEEEEEEEEEE
T ss_pred EEEEEEEECCCC--CcCccCCCCEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCEEEEEcCCCCeEEEEEEC
Confidence 455566655332 122345999999999999999998778999999999999999999986555677665544
No 6
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=97.48 E-value=0.00064 Score=53.85 Aligned_cols=74 Identities=14% Similarity=0.170 Sum_probs=53.2
Q ss_pred cEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECCC-CCeeEEEEEE
Q 011768 150 YAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPD-GPSRGYIAEI 223 (478)
Q Consensus 150 ~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~~-g~~rgyi~E~ 223 (478)
+.+.+......-....-+..+.++++++.+|++.+..+-....+++||+++||.|+.+++.-.+ .+++.+++-.
T Consensus 28 ~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~v~~ 102 (105)
T 1v70_A 28 MLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVGEEEALLAPGMAAFAPAGAPHGVRNESASPALLLVVTA 102 (105)
T ss_dssp EEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEETTEEEEECTTCEEEECTTSCEEEECCSSSCEEEEEEEE
T ss_pred eEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEeC
Confidence 3444444433221222334445899999999999999999999999999999999999997643 4666666543
No 7
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=97.38 E-value=0.0024 Score=56.26 Aligned_cols=86 Identities=12% Similarity=0.091 Sum_probs=62.2
Q ss_pred ccEEEEEEeCCCC-CCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcce-eEEEEECC-CCCeeEEEEEEcC
Q 011768 149 GYAIHMYTANKSM-DNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQG-FRFAVSLP-DGPSRGYIAEIFG 225 (478)
Q Consensus 149 G~ai~~y~~~~sM-~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRG-i~frv~l~-~g~~rgyi~E~~~ 225 (478)
++.+.+......- ....-+..+++|++++.+|++.++.+-....+++||+++||.| +.+++.-. +.+++.+++-+..
T Consensus 45 ~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~~~~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l~v~~p~ 124 (162)
T 3l2h_A 45 HMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTMENDQYPIAPGDFVGFPCHAAAHSISNDGTETLVCLVIGQRL 124 (162)
T ss_dssp SEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEETTEEEEECTTCEEEECTTSCCEEEECCSSSCEEEEEEEECC
T ss_pred eEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEECCEEEEeCCCCEEEECCCCceEEeEeCCCCCEEEEEEECCC
Confidence 4455555544332 1224456689999999999999999999999999999999997 99999753 4467777766653
Q ss_pred Ce--eeeCCCC
Q 011768 226 TH--FQLPDLG 234 (478)
Q Consensus 226 ~~--~~LPelG 234 (478)
.. ...|+.+
T Consensus 125 ~~~~~~~pd~~ 135 (162)
T 3l2h_A 125 DQDVVDYPNQH 135 (162)
T ss_dssp SEEEEEETTTT
T ss_pred CCCeEecCCCC
Confidence 32 4455544
No 8
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=97.37 E-value=0.00041 Score=55.43 Aligned_cols=56 Identities=25% Similarity=0.303 Sum_probs=48.3
Q ss_pred ecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECCCCCeeEEEEEE
Q 011768 167 CNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEI 223 (478)
Q Consensus 167 ~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~ 223 (478)
++.+.++++++.+|++.+..+-....+++||+++||.|+.+++... ++++.+++|.
T Consensus 46 ~H~~~~e~~~v~~G~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~-~~~~~l~i~~ 101 (102)
T 3d82_A 46 EHADTDEVFIVMEGTLQIAFRDQNITLQAGEMYVIPKGVEHKPMAK-EECKIMIIEP 101 (102)
T ss_dssp CCTTCCEEEEEEESEEEEECSSCEEEEETTEEEEECTTCCBEEEEE-EEEEEEEEEE
T ss_pred eCCCCcEEEEEEeCEEEEEECCEEEEEcCCCEEEECCCCeEeeEcC-CCCEEEEEEc
Confidence 4444499999999999999999999999999999999999999764 5777777774
No 9
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=97.34 E-value=0.0009 Score=56.43 Aligned_cols=48 Identities=23% Similarity=0.293 Sum_probs=44.1
Q ss_pred eecCCCCEEEEEEeCcEEEEeecee--eeecCCcEEEEcceeEEEEECCC
Q 011768 166 FCNADGDFLVVPQKGRLWIATECGK--LEVSPGEIAVLPQGFRFAVSLPD 213 (478)
Q Consensus 166 f~NaDGD~Li~pq~G~l~l~TEfG~--L~v~pGd~vVIPRGi~frv~l~~ 213 (478)
.+..+++|++++.+|++.|+.+-+. ..+++||.++||.|+.+|+.-.+
T Consensus 48 ~~~~~~~E~~~Vl~G~~~l~~~~~~~~~~l~~Gd~i~ipa~~~H~~~n~~ 97 (112)
T 2opk_A 48 WYDSPQDEWVMVVSGSAGIECEGDTAPRVMRPGDWLHVPAHCRHRVAWTD 97 (112)
T ss_dssp CBCCSSEEEEEEEESCEEEEETTCSSCEEECTTEEEEECTTCCEEEEEEC
T ss_pred cccCCccEEEEEEeCeEEEEECCEEEEEEECCCCEEEECCCCcEEEEeCC
Confidence 3778999999999999999999999 99999999999999999997544
No 10
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=97.33 E-value=0.0011 Score=53.51 Aligned_cols=57 Identities=11% Similarity=0.066 Sum_probs=48.4
Q ss_pred ecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECC-CCCeeEEEEEE
Q 011768 167 CNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAEI 223 (478)
Q Consensus 167 ~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~-~g~~rgyi~E~ 223 (478)
++.+.++++++.+|++.++.+-....+++||+++||.|+.+++.-. +.+++.+++-.
T Consensus 40 ~H~~~~e~~~vl~G~~~~~~~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v~~ 97 (113)
T 2gu9_A 40 RHRGADQWLFVVDGAGEAIVDGHTQALQAGSLIAIERGQAHEIRNTGDTPLKTVNFYH 97 (113)
T ss_dssp SSCCCEEEEEEEECCEEEEETTEEEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEE
T ss_pred ccCCCcEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEEC
Confidence 4445899999999999999999999999999999999999999764 34667666644
No 11
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=97.24 E-value=0.00033 Score=57.47 Aligned_cols=55 Identities=16% Similarity=0.253 Sum_probs=46.9
Q ss_pred CCC-CEEEEEEeCcEEEEeec-eeeeecCCcEEEEcceeEEEEECCCCCeeEEEEEEc
Q 011768 169 ADG-DFLVVPQKGRLWIATEC-GKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 224 (478)
Q Consensus 169 aDG-D~Li~pq~G~l~l~TEf-G~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~~ 224 (478)
.++ ++++++.+|++.+.++- ....+++||.++||.|+.+++.- .++++.+++|.-
T Consensus 45 H~~~~E~~~Vl~G~~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~-~~~~~~l~i~~~ 101 (107)
T 2i45_A 45 HGYSDKVLFAVEGDMAVDFADGGSMTIREGEMAVVPKSVSHRPRS-ENGCSLVLIELS 101 (107)
T ss_dssp C--CCEEEEESSSCEEEEETTSCEEEECTTEEEEECTTCCEEEEE-EEEEEEEEEECC
T ss_pred CCCCCEEEEEEeCEEEEEECCCcEEEECCCCEEEECCCCcEeeEe-CCCeEEEEEECC
Confidence 355 99999999999999999 89999999999999999999876 346777777754
No 12
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=97.23 E-value=0.00079 Score=62.90 Aligned_cols=57 Identities=18% Similarity=0.299 Sum_probs=49.7
Q ss_pred cCCCCEEEEEEeCcEEEEeec-e---eeeecCCcEEEEcceeEEEEECCCCCeeEEEEEEc
Q 011768 168 NADGDFLVVPQKGRLWIATEC-G---KLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 224 (478)
Q Consensus 168 NaDGD~Li~pq~G~l~l~TEf-G---~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~~ 224 (478)
..++||++++.+|++.|+.+- | .+.+++||+.++|+|+.++-.-....+.+|+||--
T Consensus 52 ~h~~dE~FyvlkG~m~i~v~d~g~~~~v~l~eGE~f~lP~gvpH~P~r~~~e~~~lviE~~ 112 (174)
T 1yfu_A 52 DDPLEEFFYQLRGNAYLNLWVDGRRERADLKEGDIFLLPPHVRHSPQRPEAGSACLVIERQ 112 (174)
T ss_dssp ECSSCEEEEEEESCEEEEEEETTEEEEEEECTTCEEEECTTCCEEEEBCCTTCEEEEEEEC
T ss_pred CCCCceEEEEEeeEEEEEEEcCCceeeEEECCCCEEEeCCCCCcCccccCCCCEEEEEEeC
Confidence 449999999999999999876 4 89999999999999999998653337899999975
No 13
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=97.20 E-value=0.0029 Score=52.87 Aligned_cols=71 Identities=11% Similarity=0.047 Sum_probs=52.7
Q ss_pred cEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECCCCCeeEEEE
Q 011768 150 YAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIA 221 (478)
Q Consensus 150 ~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~ 221 (478)
+.+.+......... -.-..++++++++.+|++.+..+-....+++||+++||.|+.+++.-.+++++.+++
T Consensus 41 ~~~~~~~~~pg~~~-~~H~H~~~e~~~vl~G~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~l~v 111 (126)
T 4e2g_A 41 LMLNWVRIEPNTEM-PAHEHPHEQAGVMLEGTLELTIGEETRVLRPGMAYTIPGGVRHRARTFEDGCLVLDI 111 (126)
T ss_dssp CEEEEEEECTTCEE-EEECCSSEEEEEEEEECEEEEETTEEEEECTTEEEEECTTCCEEEECCTTCEEEEEE
T ss_pred eEEEEEEECCCCcC-CCccCCCceEEEEEEeEEEEEECCEEEEeCCCCEEEECCCCcEEeEECCCCEEEEEE
Confidence 44455544433212 123455799999999999999999999999999999999999999875545554443
No 14
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=97.17 E-value=0.00031 Score=61.28 Aligned_cols=71 Identities=10% Similarity=0.090 Sum_probs=52.0
Q ss_pred ccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeecee-eeecCCcEEEEcceeEEEEECCCCCeeEEEE
Q 011768 149 GYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGK-LEVSPGEIAVLPQGFRFAVSLPDGPSRGYIA 221 (478)
Q Consensus 149 G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~-L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~ 221 (478)
.+.+.++.+...- . ...-.++||++++.+|++.|+.+-|. +.+++||.++||+|+..+++..+...+.|++
T Consensus 48 ~~~~g~w~~~pG~-~-~~~~~~~~E~~~Vl~G~~~l~~~~g~~~~l~~GD~~~ip~g~~h~~~~~~~~rK~yv~ 119 (123)
T 3bcw_A 48 KVESGVWESTSGS-F-QSNTTGYIEYCHIIEGEARLVDPDGTVHAVKAGDAFIMPEGYTGRWEVDRHVKKIYFV 119 (123)
T ss_dssp TEEEEEEEEEEEE-E-ECCCTTEEEEEEEEEEEEEEECTTCCEEEEETTCEEEECTTCCCEEEEEEEEEEEEEE
T ss_pred CEEEEEEEECCCc-e-eeEcCCCcEEEEEEEEEEEEEECCCeEEEECCCCEEEECCCCeEEEEECCceeEEEEE
Confidence 3566777766431 1 11222349999999999999996665 8999999999999999988765444466766
No 15
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=97.11 E-value=0.0079 Score=55.61 Aligned_cols=80 Identities=14% Similarity=0.056 Sum_probs=54.8
Q ss_pred CCcccc-cccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeece--------eeeecCCcEEEEcceeEEEEEC-
Q 011768 142 GSSFLR-HGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECG--------KLEVSPGEIAVLPQGFRFAVSL- 211 (478)
Q Consensus 142 gD~~~~-~G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG--------~L~v~pGd~vVIPRGi~frv~l- 211 (478)
.-+.++ .|+.+........-....-++..++|++++.+|++++...-+ ...+++||.++||+|+.+++.-
T Consensus 63 ~~p~l~~~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~ 142 (201)
T 1fi2_A 63 EWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNV 142 (201)
T ss_dssp TCGGGTTSSCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEEC
T ss_pred cCCCcccCceEEEEEEECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeC
Confidence 334443 356665544443221224466778999999999999988632 5789999999999999999864
Q ss_pred CCCCeeEEEE
Q 011768 212 PDGPSRGYIA 221 (478)
Q Consensus 212 ~~g~~rgyi~ 221 (478)
.+.+++.+++
T Consensus 143 g~~~~~~l~v 152 (201)
T 1fi2_A 143 GKTEAYMVVS 152 (201)
T ss_dssp SSSCEEEEEE
T ss_pred CCCCEEEEEE
Confidence 3445555544
No 16
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=97.08 E-value=0.0037 Score=51.30 Aligned_cols=73 Identities=18% Similarity=0.260 Sum_probs=55.1
Q ss_pred cEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECCCCCeeEEEEEEc
Q 011768 150 YAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 224 (478)
Q Consensus 150 ~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~~ 224 (478)
+.+........-.. -.-..++++++++.+|++.+..+-....+++||+++||.|+.+++.-.+ +++.+++-+.
T Consensus 40 ~~~~~~~~~~g~~~-~~H~H~~~e~~~vl~G~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~-~~~~~~v~~~ 112 (115)
T 1yhf_A 40 LGITVFSLDKGQEI-GRHSSPGDAMVTILSGLAEITIDQETYRVAEGQTIVMPAGIPHALYAVE-AFQMLLVVVK 112 (115)
T ss_dssp EEEEEEEECTTCEE-EEECCSSEEEEEEEESEEEEEETTEEEEEETTCEEEECTTSCEEEEESS-CEEEEEEEEC
T ss_pred eEEEEEEECCCCcc-CCEECCCcEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCCEEEEECC-CceEEEEEEc
Confidence 34455444432211 1245578999999999999999999999999999999999999997643 6777776543
No 17
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=97.07 E-value=0.0019 Score=59.29 Aligned_cols=81 Identities=9% Similarity=0.007 Sum_probs=60.9
Q ss_pred ceeeeeecCCcccccccEEEEEEeCCCCCCcceecCCCCEEEEEEe--CcEEEEeeceeeeecCCcEEEEcceeEEEEEC
Q 011768 134 GLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQK--GRLWIATECGKLEVSPGEIAVLPQGFRFAVSL 211 (478)
Q Consensus 134 gl~tl~g~gD~~~~~G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~--G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l 211 (478)
.+|.++...+ -.+++++....... ..=+..+.+|++++.+ |++.++.+--...+++||.++||.|+.+++.
T Consensus 35 srR~l~~~~~----fp~sv~~v~~g~~~--~~H~H~~~~E~~yVLe~~G~g~v~idge~~~l~~GD~v~IPpg~~H~i~- 107 (157)
T 4h7l_A 35 AQRAFGHDAG----TSVSVHYTQITKAA--RTHYHREHQEIYVVLDHAAHATIELNGQSYPLTKLLAISIPPLVRHRIV- 107 (157)
T ss_dssp EEEESCGGGC----CSCEEEEEEECSCC--CCBBCSSCEEEEEEEEECTTCEEEETTEEEECCTTEEEEECTTCCEEEE-
T ss_pred eeEEeEcCCC----CcEEEEEEeCCCCc--cceECCCCcEEEEEEecCcEEEEEECCEEEEeCCCCEEEECCCCeEeeE-
Confidence 4566665443 23466766666554 2446667899999999 9999999999999999999999999999996
Q ss_pred CCCCeeEEEEEE
Q 011768 212 PDGPSRGYIAEI 223 (478)
Q Consensus 212 ~~g~~rgyi~E~ 223 (478)
++.+.+.+-+
T Consensus 108 --g~l~~L~I~~ 117 (157)
T 4h7l_A 108 --GEATIINIVS 117 (157)
T ss_dssp --SCEEEEEEEE
T ss_pred --CCEEEEEEEC
Confidence 3555555544
No 18
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=97.06 E-value=0.00099 Score=60.61 Aligned_cols=68 Identities=21% Similarity=0.214 Sum_probs=53.9
Q ss_pred cEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECCCCCeeEEEE
Q 011768 150 YAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIA 221 (478)
Q Consensus 150 ~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~ 221 (478)
+++.++.+. . .++-...++||++++.+|++.|+-+-....++|||.++||+|+++++.-+ +++|.+.+
T Consensus 66 ~s~g~~~~e-~--~~~~~~~~~eE~~yVLeG~~~l~i~g~~~~l~~GD~i~iP~G~~h~~~n~-~~a~~l~V 133 (151)
T 4axo_A 66 LGCGMMEMK-E--TTFDWTLNYDEIDYVIDGTLDIIIDGRKVSASSGELIFIPKGSKIQFSVP-DYARFIYV 133 (151)
T ss_dssp CEEEEEEEE-E--EEEEEECSSEEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCEEEEEEE-EEEEEEEE
T ss_pred EEEEEEEEc-C--ccccEeCCCcEEEEEEEeEEEEEECCEEEEEcCCCEEEECCCCEEEEEeC-CCEEEEEE
Confidence 566666665 2 22446778999999999999999887889999999999999999998765 45655444
No 19
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=97.05 E-value=0.004 Score=54.35 Aligned_cols=72 Identities=15% Similarity=0.131 Sum_probs=52.6
Q ss_pred cEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeecee------eeecCCcEEEEcceeEEEEECC-CCCeeEEEE
Q 011768 150 YAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGK------LEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIA 221 (478)
Q Consensus 150 ~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~------L~v~pGd~vVIPRGi~frv~l~-~g~~rgyi~ 221 (478)
+.+.+......-....-+..++++++++.+|++.+..+-.. ..+++||+++||.|+.+++.-. +.+++.+++
T Consensus 43 ~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~i 121 (148)
T 2oa2_A 43 LQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYSI 121 (148)
T ss_dssp CEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred eEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEEE
Confidence 44454444322111233555688999999999999999888 9999999999999999998643 446666655
No 20
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=97.05 E-value=0.0046 Score=51.24 Aligned_cols=56 Identities=11% Similarity=0.166 Sum_probs=46.9
Q ss_pred cCCCCEEEEEEeCcEEEEeeceee-eecCCcEEEEcceeEEEEECCC-CCeeEEEEEE
Q 011768 168 NADGDFLVVPQKGRLWIATECGKL-EVSPGEIAVLPQGFRFAVSLPD-GPSRGYIAEI 223 (478)
Q Consensus 168 NaDGD~Li~pq~G~l~l~TEfG~L-~v~pGd~vVIPRGi~frv~l~~-g~~rgyi~E~ 223 (478)
..++++++++.+|++.+..+-... .+++||+++||.|+.+++...+ .+++.+++..
T Consensus 44 ~H~~~e~~~Vl~G~~~~~i~~~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i~~ 101 (117)
T 2b8m_A 44 YSNSYVHLIIIKGEMTLTLEDQEPHNYKEGNIVYVPFNVKMLIQNINSDILEFFVVKA 101 (117)
T ss_dssp ECSSCEEEEEEESEEEEEETTSCCEEEETTCEEEECTTCEEEEECCSSSEEEEEEEEC
T ss_pred eCCCcEEEEEEeCEEEEEECCEEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEEC
Confidence 347899999999999999999999 9999999999999999997643 3455555543
No 21
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=97.03 E-value=0.0039 Score=52.94 Aligned_cols=58 Identities=16% Similarity=0.173 Sum_probs=47.8
Q ss_pred ecCCCCEEEEEEeCcEEEE--eeceeeeecCCcEEEEcceeEEEEECC-CCCeeEEEEEEc
Q 011768 167 CNADGDFLVVPQKGRLWIA--TECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAEIF 224 (478)
Q Consensus 167 ~NaDGD~Li~pq~G~l~l~--TEfG~L~v~pGd~vVIPRGi~frv~l~-~g~~rgyi~E~~ 224 (478)
--.++.+++++.+|++.+. .+-....+++||+++||.|+.+++.-. +.+++.+++-..
T Consensus 55 H~H~~~e~~~vl~G~~~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i~~~ 115 (145)
T 3ht1_A 55 HFHEWEHEIYVLEGSMGLVLPDQGRTEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVAPC 115 (145)
T ss_dssp EECSSCEEEEEEEECEEEEEGGGTEEEEECTTCEEEECTTCCBEEECCTTCCEEEEEEEES
T ss_pred ccCCCceEEEEEEeEEEEEEeECCEEEEECCCCEEEECCCCeEEeEcCCCCCEEEEEEECC
Confidence 3455777789999999999 998999999999999999999999764 446776666554
No 22
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=96.99 E-value=0.0013 Score=55.97 Aligned_cols=53 Identities=19% Similarity=0.135 Sum_probs=44.1
Q ss_pred ecCCCCEEEEEEeCcEEEEeec-eeeeecCCcEEEEcceeEEEEECCCCCeeEE
Q 011768 167 CNADGDFLVVPQKGRLWIATEC-GKLEVSPGEIAVLPQGFRFAVSLPDGPSRGY 219 (478)
Q Consensus 167 ~NaDGD~Li~pq~G~l~l~TEf-G~L~v~pGd~vVIPRGi~frv~l~~g~~rgy 219 (478)
+..+-++++++.+|++.+..+- ....+++||+++||+|+.+++.-.++..+.+
T Consensus 60 ~H~~~~E~~~vl~G~~~~~~~~~~~~~l~~Gd~~~ip~g~~H~~~~~~~~~~~l 113 (134)
T 2o8q_A 60 THTVGFQLFYVLRGWVEFEYEDIGAVMLEAGGSAFQPPGVRHRELRHSDDLEVL 113 (134)
T ss_dssp EECCSCEEEEEEESEEEEEETTTEEEEEETTCEEECCTTCCEEEEEECTTCEEE
T ss_pred ECCCCcEEEEEEeCEEEEEECCcEEEEecCCCEEEECCCCcEEeEeCCCCeEEE
Confidence 4433499999999999999998 8999999999999999999987634345444
No 23
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=96.98 E-value=0.0059 Score=51.10 Aligned_cols=55 Identities=15% Similarity=0.116 Sum_probs=47.5
Q ss_pred CCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECC-CCCeeEEEEEE
Q 011768 169 ADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAEI 223 (478)
Q Consensus 169 aDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~-~g~~rgyi~E~ 223 (478)
.+..+++++.+|++.+..+-....+++||+++||.|+.+++... +.+.+.+++-.
T Consensus 52 H~~~Ei~~v~~G~~~~~i~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i~f 107 (128)
T 4i4a_A 52 HNEYELFIVIQGNAIIRINDEDFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTIWW 107 (128)
T ss_dssp CSSEEEEEEEESEEEEEETTEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEEE
T ss_pred cCCeEEEEEEeCEEEEEECCEEEEECCCcEEEECCCCcEEeEeCCCCCEEEEEEEE
Confidence 37899999999999999999999999999999999999999754 34666666643
No 24
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=96.96 E-value=0.0058 Score=55.53 Aligned_cols=104 Identities=14% Similarity=0.104 Sum_probs=67.9
Q ss_pred CCccccCCCCCCC-CCCC---ccc-ceeeeeecCCcccccccEEEEEE--eCCCCCCcceecCCCCEEEEEEeCcEEEEe
Q 011768 114 PTQLRWKPVDIPD-SPTD---FID-GLYTICGAGSSFLRHGYAIHMYT--ANKSMDNCAFCNADGDFLVVPQKGRLWIAT 186 (478)
Q Consensus 114 P~~lrW~p~~~p~-~~~D---fv~-gl~tl~g~gD~~~~~G~ai~~y~--~~~sM~~~~f~NaDGD~Li~pq~G~l~l~T 186 (478)
++.++|+..+.-. ...+ |-. -++.|.+.++ .++.+.++. ++.... . --.+.++++++.+|++.+..
T Consensus 16 ~~~~~w~~v~~~~~~~~~~~p~~gv~~r~L~~~~~----~~~~~~~~~l~pG~~~~--~-H~H~~~E~~~Vl~G~~~~~v 88 (166)
T 3jzv_A 16 QSQYRWPGVDLLAYKEEGSAPFRSVTRQVLFSGNG----LTGELRYFEVGPGGHST--L-ERHQHAHGVMILKGRGHAMV 88 (166)
T ss_dssp CCCCCCTTSCEEECCCC-CCSCEEEEEEEEECCTT----CSEEEEEEEEEEEEECC--C-BBCSSCEEEEEEEECEEEEE
T ss_pred cCCcCcccChhhhcccCCCcccCCeEEEEEECCCC----CeEEEEEEEECCCCccC--c-eeCCCcEEEEEEeCEEEEEE
Confidence 4777888765421 1111 211 2444555543 345555443 333322 2 23456899999999999999
Q ss_pred eceeeeecCCcEEEEcceeEEEEECC-CCCeeEEEEEEc
Q 011768 187 ECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAEIF 224 (478)
Q Consensus 187 EfG~L~v~pGd~vVIPRGi~frv~l~-~g~~rgyi~E~~ 224 (478)
+-....+++||.++||.|+.+++.-. +.+++.+++-.+
T Consensus 89 ~g~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i~~~ 127 (166)
T 3jzv_A 89 GRAVSAVAPYDLVTIPGWSWHQFRAPADEALGFLCMVNA 127 (166)
T ss_dssp TTEEEEECTTCEEEECTTCCEEEECCTTSCEEEEEEEES
T ss_pred CCEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEcc
Confidence 99999999999999999999999753 446666666555
No 25
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=96.92 E-value=0.0011 Score=55.75 Aligned_cols=54 Identities=19% Similarity=0.290 Sum_probs=44.7
Q ss_pred cCCCCEEEEEEeCcEEEEee-ceeeeecCCcEEEEcceeEEEEECCCCCeeEEEE
Q 011768 168 NADGDFLVVPQKGRLWIATE-CGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIA 221 (478)
Q Consensus 168 NaDGD~Li~pq~G~l~l~TE-fG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~ 221 (478)
..+++|++++.+|++.++.+ --...+++||.++||+|+..++.-.+...+.|++
T Consensus 46 hH~~~E~~~Vl~G~~~~~i~~g~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~yv~ 100 (101)
T 1o5u_A 46 YYDTNETCYILEGKVEVTTEDGKKYVIEKGDLVTFPKGLRCRWKVLEPVRKHYNL 100 (101)
T ss_dssp ECSSCEEEEEEEEEEEEEETTCCEEEEETTCEEEECTTCEEEEEEEEEEEEEEEE
T ss_pred cCCceEEEEEEeCEEEEEECCCCEEEECCCCEEEECCCCcEEEEeCCCeeEEEEE
Confidence 46799999999999999998 5688999999999999999998764433455543
No 26
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=96.88 E-value=0.0055 Score=49.66 Aligned_cols=57 Identities=23% Similarity=0.167 Sum_probs=47.9
Q ss_pred cCCCC-EEEEEEeCcEEEEeece--eeeecCCcEEEEcceeEEEEEC-CCCCeeEEEEEEc
Q 011768 168 NADGD-FLVVPQKGRLWIATECG--KLEVSPGEIAVLPQGFRFAVSL-PDGPSRGYIAEIF 224 (478)
Q Consensus 168 NaDGD-~Li~pq~G~l~l~TEfG--~L~v~pGd~vVIPRGi~frv~l-~~g~~rgyi~E~~ 224 (478)
...++ +++++.+|++.++++-| ...+++||.++||.|+.+++.- .+.+++.+.+|.-
T Consensus 35 ~H~~~~e~~~Vl~G~~~~~~~~g~~~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~v~~~ 95 (97)
T 2fqp_A 35 RHSMDYVVVPMTTGPLLLETPEGSVTSQLTRGVSYTRPEGVEHNVINPSDTEFVFVEIEIK 95 (97)
T ss_dssp ECCSCEEEEESSCEEEEEEETTEEEEEEECTTCCEEECTTCEEEEECCSSSCEEEEEEEEC
T ss_pred ECCCCcEEEEEeecEEEEEeCCCCEEEEEcCCCEEEeCCCCcccCEeCCCCcEEEEEEEEc
Confidence 34554 69999999999999986 7899999999999999999964 3458888888864
No 27
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=96.84 E-value=0.0048 Score=52.34 Aligned_cols=58 Identities=12% Similarity=-0.031 Sum_probs=48.6
Q ss_pred ecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECCC-CCeeEEEEEEc
Q 011768 167 CNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPD-GPSRGYIAEIF 224 (478)
Q Consensus 167 ~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~~-g~~rgyi~E~~ 224 (478)
--.++++++++.+|++.++.+-....+++||+++||.|+.+++...+ .+++.+++-..
T Consensus 64 H~H~~~e~~~Vl~G~~~~~i~~~~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~v~~~ 122 (126)
T 1vj2_A 64 HSHPWEHEIFVLKGKLTVLKEQGEETVEEGFYIFVEPNEIHGFRNDTDSEVEFLCLIPK 122 (126)
T ss_dssp ECCSSCEEEEEEESEEEEECSSCEEEEETTEEEEECTTCCEEEECCSSSCEEEEEEEEG
T ss_pred eeCCCcEEEEEEEeEEEEEECCEEEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcc
Confidence 34568999999999999999999999999999999999999997643 36666665443
No 28
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=96.84 E-value=0.0069 Score=54.32 Aligned_cols=76 Identities=16% Similarity=0.291 Sum_probs=57.4
Q ss_pred ccEEEEEEeCCCCCC-cceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcce--eEEEEECC-CCCeeEEEEEEc
Q 011768 149 GYAIHMYTANKSMDN-CAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQG--FRFAVSLP-DGPSRGYIAEIF 224 (478)
Q Consensus 149 G~ai~~y~~~~sM~~-~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRG--i~frv~l~-~g~~rgyi~E~~ 224 (478)
.+.+.+......... ..-+....||++++.+|++.++.+-....+++||.++||.| +.+++.-. +.+++.+++-+.
T Consensus 42 ~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~~~~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~l~v~~p 121 (163)
T 3i7d_A 42 QFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDDQGEHPMVPGDCAAFPAGDPNGHQFVNRTDAPATFLVVGTR 121 (163)
T ss_dssp SEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEETTEEEEECTTCEEEECTTCCCCBEEECCSSSCEEEEEEEEC
T ss_pred eEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEECCEEEEeCCCCEEEECCCCCcceEEEECCCCCEEEEEEECC
Confidence 455566555433211 24456666999999999999999999999999999999999 99998653 446776666554
No 29
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=96.78 E-value=0.0026 Score=52.24 Aligned_cols=55 Identities=7% Similarity=0.003 Sum_probs=46.8
Q ss_pred ecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECCCCCeeEEEEE
Q 011768 167 CNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAE 222 (478)
Q Consensus 167 ~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E 222 (478)
-..++++++++.+|++.+..+-....+++||+++||.|+.+++...+ +++.+++=
T Consensus 50 H~H~~~e~~~vl~G~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~-~~~~l~v~ 104 (116)
T 2pfw_A 50 HAHRHSQVSYVVEGEFHVNVDGVIKVLTAGDSFFVPPHVDHGAVCPT-GGILIDTF 104 (116)
T ss_dssp ECCSSEEEEEEEEECEEEEETTEEEEECTTCEEEECTTCCEEEEESS-CEEEEEEE
T ss_pred EECCcceEEEEEeeEEEEEECCEEEEeCCCCEEEECcCCceeeEeCC-CcEEEEEE
Confidence 34568999999999999999999999999999999999999997644 66655543
No 30
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=96.72 E-value=0.0056 Score=53.56 Aligned_cols=69 Identities=10% Similarity=0.128 Sum_probs=53.3
Q ss_pred cEEEEEEeCCCCCCcceecCCCC-EEEEEEeCcEEEEeecee-eeecCCcEEEEcceeEEEEECCCCCeeEEEE
Q 011768 150 YAIHMYTANKSMDNCAFCNADGD-FLVVPQKGRLWIATECGK-LEVSPGEIAVLPQGFRFAVSLPDGPSRGYIA 221 (478)
Q Consensus 150 ~ai~~y~~~~sM~~~~f~NaDGD-~Li~pq~G~l~l~TEfG~-L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~ 221 (478)
+.+.+|.|...- +=.+-+.+ |.+++.+|++.|+.+-|. +++++||.++||.|.+=+++..+.--+.|+|
T Consensus 42 ~~~GvWe~tPG~---~~~~~~~~~E~~~iLeG~~~lt~ddG~~~~l~aGD~~~~P~G~~gtWev~e~vrK~~~~ 112 (116)
T 3es4_A 42 TIVAVWMAEPGI---YNYAGRDLEETFVVVEGEALYSQADADPVKIGPGSIVSIAKGVPSRLEILSSFRKLATV 112 (116)
T ss_dssp CEEEEEEECSEE---EEECCCSEEEEEEEEECCEEEEETTCCCEEECTTEEEEECTTCCEEEEECSCEEEEEEE
T ss_pred EEEEEEecCCce---eECeeCCCcEEEEEEEeEEEEEeCCCeEEEECCCCEEEECCCCeEEEEEeEEEeEEEEE
Confidence 455788888652 22333555 999999999999999887 7999999999999999888875544455554
No 31
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=96.71 E-value=0.0042 Score=52.27 Aligned_cols=54 Identities=13% Similarity=0.156 Sum_probs=45.8
Q ss_pred ecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECCCCCeeEEEE
Q 011768 167 CNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIA 221 (478)
Q Consensus 167 ~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~ 221 (478)
-..++++++++.+|++.++.+-....+++||.++||.|+.+++.-. ++++.+++
T Consensus 52 H~H~~~e~~~Vl~G~~~~~i~~~~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~~~ 105 (114)
T 3fjs_A 52 HSVAGPSTIQCLEGEVEIGVDGAQRRLHQGDLLYLGAGAAHDVNAI-TNTSLLVT 105 (114)
T ss_dssp ECCSSCEEEEEEESCEEEEETTEEEEECTTEEEEECTTCCEEEEES-SSEEEEEE
T ss_pred eeCCCcEEEEEEECEEEEEECCEEEEECCCCEEEECCCCcEEEEeC-CCcEEEEE
Confidence 3456789999999999999999999999999999999999999764 35554443
No 32
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=96.70 E-value=0.0029 Score=55.57 Aligned_cols=54 Identities=15% Similarity=0.215 Sum_probs=46.2
Q ss_pred ecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECCCCCeeEEEE
Q 011768 167 CNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIA 221 (478)
Q Consensus 167 ~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~ 221 (478)
...++||++++.+|++.|+.+--...+++||.++||.|+..++.- ++++|.+.+
T Consensus 71 ~h~~~~E~~~VLeG~~~l~~~g~~~~l~~GD~i~~p~g~~h~~~~-~~~~~~l~v 124 (133)
T 2pyt_A 71 WTLNYDEIDMVLEGELHVRHEGETMIAKAGDVMFIPKGSSIEFGT-PTSVRFLYV 124 (133)
T ss_dssp EECSSEEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCEEEEEE-EEEEEEEEE
T ss_pred ccCCCCEEEEEEECEEEEEECCEEEEECCCcEEEECCCCEEEEEe-CCCEEEEEE
Confidence 566899999999999999999778999999999999999988874 446665544
No 33
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=96.68 E-value=0.0082 Score=50.38 Aligned_cols=58 Identities=14% Similarity=0.173 Sum_probs=46.0
Q ss_pred ecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECC-CCCeeEEEEEEc
Q 011768 167 CNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAEIF 224 (478)
Q Consensus 167 ~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~-~g~~rgyi~E~~ 224 (478)
+....++++++.+|++.+..+-....+++||+++||.|+.+++... +.+++.+++-..
T Consensus 44 ~H~~~e~~~~vl~G~~~~~i~~~~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~~~i~~~ 102 (125)
T 3cew_A 44 SHKQNEEIYGILSGKGFITIDGEKIELQAGDWLRIAPDGKRQISAASDSPIGFLCIQVK 102 (125)
T ss_dssp EESSEEEEEEEEEEEEEEEETTEEEEEETTEEEEECTTCCEEEEEBTTBCEEEEEEEEE
T ss_pred cCCCceEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCcEEEEcCCCCCEEEEEEEcC
Confidence 3333345666999999999999999999999999999999998753 346777766654
No 34
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=96.67 E-value=0.012 Score=47.45 Aligned_cols=47 Identities=15% Similarity=0.106 Sum_probs=39.5
Q ss_pred CEE-EEEEeCcEEEEee-ceeeeecCCcEEEEcceeEEEEECCCCCeeEE
Q 011768 172 DFL-VVPQKGRLWIATE-CGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGY 219 (478)
Q Consensus 172 D~L-i~pq~G~l~l~TE-fG~L~v~pGd~vVIPRGi~frv~l~~g~~rgy 219 (478)
.++ +++.+|++.+..+ -....+++||+++||.|+.+++...+ .++.+
T Consensus 55 ~e~~~~vl~G~~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~-~~~~l 103 (110)
T 2q30_A 55 GELNIVVLEGEGEFVGDGDAVIPAPRGAVLVAPISTPHGVRAVT-DMKVL 103 (110)
T ss_dssp CEEEEEEEESCEEEECGGGCEEEECTTEEEEEETTSCEEEEESS-SEEEE
T ss_pred ccEEEEEEeCEEEEEeCCCEEEEECCCCEEEeCCCCcEEEEEcC-CcEEE
Confidence 566 8999999999998 58899999999999999999987633 45533
No 35
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=96.65 E-value=0.0031 Score=63.45 Aligned_cols=57 Identities=19% Similarity=0.242 Sum_probs=49.4
Q ss_pred ecCCCCEEEEEEeCcEEEEeec-eeeeecCCcEEEEcceeEEEEECCCCCeeEEEEEE
Q 011768 167 CNADGDFLVVPQKGRLWIATEC-GKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEI 223 (478)
Q Consensus 167 ~NaDGD~Li~pq~G~l~l~TEf-G~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~ 223 (478)
-++++|+++++++|++.|+.+- -...+++||.++||.|+.+++...+...+.+++=.
T Consensus 268 h~~~~~~~~~vleG~~~i~i~g~~~~~l~~Gd~~~iPag~~h~~~~~~~~~~~l~~~~ 325 (350)
T 1juh_A 268 WSFPGACAFQVQEGRVVVQIGDYAATELGSGDVAFIPGGVEFKYYSEAYFSKVLFVSS 325 (350)
T ss_dssp BCCSSCEEEEEEESCEEEEETTSCCEEECTTCEEEECTTCCEEEEESSSSEEEEEEEE
T ss_pred ccCCCcEEEEEEeeEEEEEECCeEEEEeCCCCEEEECCCCCEEEEecCCeEEEEEEec
Confidence 4689999999999999999986 59999999999999999999987555566666544
No 36
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=96.59 E-value=0.016 Score=51.18 Aligned_cols=75 Identities=8% Similarity=-0.043 Sum_probs=54.5
Q ss_pred ccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeec---------eeeeecCCcEEEEcceeEEEEECCC--CCee
Q 011768 149 GYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATEC---------GKLEVSPGEIAVLPQGFRFAVSLPD--GPSR 217 (478)
Q Consensus 149 G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEf---------G~L~v~pGd~vVIPRGi~frv~l~~--g~~r 217 (478)
++.+.+......-....-+. ++++++++.+|++.+.++- ....+++||+++||.|+.+++.-.+ .+++
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H-~~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~ 118 (163)
T 1lr5_A 40 EVEVWLQTISPGQRTPIHRH-SCEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQ 118 (163)
T ss_dssp SEEEEEEEECTTCBCCEEEE-SSCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEE
T ss_pred cEEEEEEEECCCCcCCCeEC-CCCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEE
Confidence 34555544332221223333 6889999999999999998 7889999999999999999997643 4677
Q ss_pred EEEEEEc
Q 011768 218 GYIAEIF 224 (478)
Q Consensus 218 gyi~E~~ 224 (478)
.+++-..
T Consensus 119 ~l~i~~~ 125 (163)
T 1lr5_A 119 VLVIISR 125 (163)
T ss_dssp EEEEEES
T ss_pred EEEEECC
Confidence 7766544
No 37
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=96.56 E-value=0.013 Score=52.84 Aligned_cols=56 Identities=9% Similarity=0.109 Sum_probs=47.9
Q ss_pred eecCCCCEEEEEEeCcEEEEeec----eeeeecCCcEEEEcceeEEEEECC--CCCeeEEEE
Q 011768 166 FCNADGDFLVVPQKGRLWIATEC----GKLEVSPGEIAVLPQGFRFAVSLP--DGPSRGYIA 221 (478)
Q Consensus 166 f~NaDGD~Li~pq~G~l~l~TEf----G~L~v~pGd~vVIPRGi~frv~l~--~g~~rgyi~ 221 (478)
....+|+|++++.+|++.+..+- -...+++||.++||.++.+++.-. +.+++.+++
T Consensus 135 ~h~h~~~E~~~Vl~G~~~~~~~~~~~~~~~~l~~GD~~~~~~~~~H~~~n~~~~~~~~~l~v 196 (198)
T 2bnm_A 135 NSGHAGNEFLFVLEGEIHMKWGDKENPKEALLPTGASMFVEEHVPHAFTAAKGTGSAKLIAV 196 (198)
T ss_dssp CCCCSSCEEEEEEESCEEEEESCTTSCEEEEECTTCEEEECTTCCEEEEESTTSCCEEEEEE
T ss_pred cccCCCeEEEEEEeeeEEEEECCcCCcccEEECCCCEEEeCCCCceEEEecCCCCCeEEEEE
Confidence 45678899999999999999988 788999999999999999998753 457776654
No 38
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=96.55 E-value=0.0057 Score=57.24 Aligned_cols=59 Identities=12% Similarity=0.115 Sum_probs=50.7
Q ss_pred ceecCCCCEEEEEEeCcEEEEeec-e-------eeeecCCcEEEEcceeEEEEECCCCCeeEEEEEEc
Q 011768 165 AFCNADGDFLVVPQKGRLWIATEC-G-------KLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 224 (478)
Q Consensus 165 ~f~NaDGD~Li~pq~G~l~l~TEf-G-------~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~~ 224 (478)
-|-..+.||+++..+|++.|.++- | .+.+++||+.++|+|+.++=.- ...+.+||||--
T Consensus 48 D~H~~~~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r-~~e~v~lviErk 114 (176)
T 1zvf_A 48 DYHINPTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSPVR-FADTVGIVVEQD 114 (176)
T ss_dssp CEEECSSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEEEE-CTTCEEEEEEEC
T ss_pred cCcCCCCceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCCcc-cCCcEEEEEEec
Confidence 344778999999999999999887 6 8999999999999999998744 346889999964
No 39
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=96.52 E-value=0.0052 Score=56.69 Aligned_cols=58 Identities=9% Similarity=0.060 Sum_probs=50.7
Q ss_pred eecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEEC-CCCCeeEEEEEE
Q 011768 166 FCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSL-PDGPSRGYIAEI 223 (478)
Q Consensus 166 f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l-~~g~~rgyi~E~ 223 (478)
....+|++++|+.+|++.|+-.-=...+.+||.+.||+|+.|++.= .+.++|.+.+-+
T Consensus 105 ~~~h~gEE~~yVLeG~v~vtl~g~~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~Vq~ 163 (166)
T 2vpv_A 105 SNSFRTYITFHVIQGIVEVTVCKNKFLSVKGSTFQIPAFNEYAIANRGNDEAKMFFVQV 163 (166)
T ss_dssp EECCSEEEEEEEEESEEEEEETTEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEEEE
T ss_pred ccCCCceEEEEEEEeEEEEEECCEEEEEcCCCEEEECCCCCEEEEECCCCCEEEEEEEE
Confidence 3678999999999999999998888899999999999999999964 456889887743
No 40
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=96.52 E-value=0.0081 Score=49.50 Aligned_cols=56 Identities=18% Similarity=0.231 Sum_probs=48.1
Q ss_pred cCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECCCCCeeEEEEEEc
Q 011768 168 NADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 224 (478)
Q Consensus 168 NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~~ 224 (478)
..++++++++.+|++.+..+--...+++||.++||.|+.+++.-. ++++.+++-..
T Consensus 55 ~h~~~e~~~vl~G~~~~~i~~~~~~l~~Gd~i~i~~~~~H~~~~~-~~~~~~~i~~~ 110 (114)
T 2ozj_A 55 EYFGDTLYLILQGEAVITFDDQKIDLVPEDVLMVPAHKIHAIAGK-GRFKMLQITLI 110 (114)
T ss_dssp CCSSCEEEEEEEEEEEEEETTEEEEECTTCEEEECTTCCBEEEEE-EEEEEEEEEEC
T ss_pred ECCCCeEEEEEeCEEEEEECCEEEEecCCCEEEECCCCcEEEEeC-CCcEEEEEEEc
Confidence 468999999999999999999999999999999999999998753 46676666554
No 41
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=96.49 E-value=0.016 Score=56.28 Aligned_cols=87 Identities=14% Similarity=0.049 Sum_probs=63.3
Q ss_pred CCcccceeeeeecCCcccccccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeecee-eeecCCcEEEEcceeEE
Q 011768 129 TDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGK-LEVSPGEIAVLPQGFRF 207 (478)
Q Consensus 129 ~Dfv~gl~tl~g~gD~~~~~G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~-L~v~pGd~vVIPRGi~f 207 (478)
+|......++..+.| ..+...+|.|...- +.-+.-+-||+.++.+|+..|..+-|. .++++||.++||+|.+=
T Consensus 150 G~P~~~~~~~~~~~~----g~~~~GiW~~tpG~--~~~~~~~~~E~~~ILeG~v~lt~~~G~~~~~~aGD~~~~P~G~~~ 223 (238)
T 3myx_A 150 PLPQCRSNNLFEDTA----STLRIGVWDSTPYE--RISRPHKIHELMNLIEGRVVLSLENGSSLTVNTGDTVFVAQGAPC 223 (238)
T ss_dssp CCCCEEEEEEEECSS----SSCEEEEEEECCEE--BCCEECSSCEEEEEEECCEEEEETTSCEEEECTTCEEEECTTCEE
T ss_pred CCchheeeEEEECCC----CCEEEeEEEeCCCE--EECCcCCCCEEEEEEEeEEEEEeCCCCEEEECCCCEEEECCCCEE
Confidence 444444455544332 24677889998631 122334778999999999999999996 99999999999999999
Q ss_pred EEECCCCCeeEEEE
Q 011768 208 AVSLPDGPSRGYIA 221 (478)
Q Consensus 208 rv~l~~g~~rgyi~ 221 (478)
.++..+---+.|+|
T Consensus 224 tWev~e~vrK~Yvi 237 (238)
T 3myx_A 224 KWTSTGYVRKFYAV 237 (238)
T ss_dssp EEEESSCEEEEEEE
T ss_pred EEEECccEEEEEEe
Confidence 99886544466665
No 42
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=96.48 E-value=0.0083 Score=54.69 Aligned_cols=46 Identities=22% Similarity=0.387 Sum_probs=39.3
Q ss_pred cCCCCEEEEEEeCcEEEEee----ceeeeecCCcEEEEcceeEEEEECCC
Q 011768 168 NADGDFLVVPQKGRLWIATE----CGKLEVSPGEIAVLPQGFRFAVSLPD 213 (478)
Q Consensus 168 NaDGD~Li~pq~G~l~l~TE----fG~L~v~pGd~vVIPRGi~frv~l~~ 213 (478)
+.+++|++++.+|++++.-. .-...+++||+++||+|+.+.+.-.+
T Consensus 58 h~~a~E~~yVl~G~~~v~v~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g 107 (178)
T 1dgw_A 58 HSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPD 107 (178)
T ss_dssp EESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECC
T ss_pred CCCCCEEEEEEeEEEEEEEEeCCCcEEEEECCCCEEEECCCCeEEEEeCC
Confidence 67899999999999999764 33678999999999999999986533
No 43
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=96.40 E-value=0.0072 Score=60.29 Aligned_cols=59 Identities=17% Similarity=0.253 Sum_probs=52.1
Q ss_pred ceecCCCCEEEEEEeCcEEEEeec-e---eeeecCCcEEEEcceeEEEEECCCCCeeEEEEEEc
Q 011768 165 AFCNADGDFLVVPQKGRLWIATEC-G---KLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 224 (478)
Q Consensus 165 ~f~NaDGD~Li~pq~G~l~l~TEf-G---~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~~ 224 (478)
-|-..++||+++..+|.+.|+-.- | .+.+++||+.|+|+|+.++=.- ...+.|+|+|--
T Consensus 45 d~H~~~~dE~FyqlkG~m~l~~~d~g~~~~V~i~eGemfllP~gv~HsP~r-~~et~gLviE~~ 107 (286)
T 2qnk_A 45 DYHIEEGEEVFYQLEGDMVLRVLEQGKHRDVVIRQGEIFLLPARVPHSPQR-FANTVGLVVERR 107 (286)
T ss_dssp CEEECSSCEEEEEEESCEEEEEEETTEEEEEEECTTEEEEECTTCCEEEEE-CTTCEEEEEEEC
T ss_pred cCcCCCCCeEEEEEeCeEEEEEEeCCceeeEEECCCeEEEeCCCCCcCCcc-cCCeEEEEEeec
Confidence 445788999999999999999888 8 8999999999999999998865 457899999953
No 44
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=96.38 E-value=0.014 Score=48.64 Aligned_cols=55 Identities=13% Similarity=0.000 Sum_probs=43.3
Q ss_pred ecCCCCEEEEEEeCcEEEEe-eceeeeecCCcEEEEcceeEEEEECC-CCCeeEEEE
Q 011768 167 CNADGDFLVVPQKGRLWIAT-ECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIA 221 (478)
Q Consensus 167 ~NaDGD~Li~pq~G~l~l~T-EfG~L~v~pGd~vVIPRGi~frv~l~-~g~~rgyi~ 221 (478)
+....++++++.+|++.+.. +--...+++||.++||.|+.+++.-. +.+++.+.+
T Consensus 56 ~H~~~~e~~~Vl~G~~~~~~~~~~~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v 112 (125)
T 3h8u_A 56 VHPHGQDTWTVISGEAEYHQGNGIVTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSV 112 (125)
T ss_dssp -CTTCEEEEEEEECEEEEECSTTCEEEEETTEEEEECTTCCCEEEECSSSCEEEEEE
T ss_pred cCCCCeEEEEEEEeEEEEEECCCeEEEeCCCCEEEECCCCEEEeEeCCCCCEEEEEE
Confidence 33444899999999999998 66678899999999999999999753 345555544
No 45
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=96.35 E-value=0.015 Score=56.37 Aligned_cols=74 Identities=14% Similarity=0.138 Sum_probs=55.6
Q ss_pred ccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECCCCCeeEEEEE
Q 011768 149 GYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAE 222 (478)
Q Consensus 149 G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E 222 (478)
.+.+.+......-....-...++++++++.+|++.+..+-....+++||+++||.|+.+++.-.+++++.+++=
T Consensus 45 ~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~~~~~~l~~Gd~~~~p~~~~H~~~n~~~~~~~~~~~ 118 (337)
T 1y3t_A 45 LFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTLDGERYLLISGDYANIPAGTPHSYRMQSHRTRLVSYT 118 (337)
T ss_dssp SEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEETTEEEEECTTCEEEECTTCCEEEEECSTTEEEEEEE
T ss_pred eEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEECCEEEEECCCCEEEECCCCcEEEEECCCCeEEEEEE
Confidence 45555544443222223455559999999999999999888899999999999999999997655567777763
No 46
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=96.34 E-value=0.016 Score=52.07 Aligned_cols=56 Identities=9% Similarity=-0.064 Sum_probs=47.3
Q ss_pred CCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECC-CCCeeEEEEEEc
Q 011768 169 ADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAEIF 224 (478)
Q Consensus 169 aDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~-~g~~rgyi~E~~ 224 (478)
.+.++++++.+|++.++.+-....+++||+++||.|+.+++.-. +.+++.+.+-.+
T Consensus 62 H~~~E~~~Vl~G~~~v~v~g~~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~~~ 118 (156)
T 3kgz_A 62 HAHVHAVMIHRGHGQCLVGETISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVVNA 118 (156)
T ss_dssp CSSCEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCCEEEECCSSSCEEEEEEEES
T ss_pred CCCcEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEeC
Confidence 45789999999999999999999999999999999999999753 346666655554
No 47
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=96.29 E-value=0.021 Score=55.14 Aligned_cols=54 Identities=9% Similarity=0.041 Sum_probs=45.6
Q ss_pred ceecCCCCEEEEEEeCcEEEEe--------ece------------eeeecCCcEEEEcceeEEEEECC-CCCeeE
Q 011768 165 AFCNADGDFLVVPQKGRLWIAT--------ECG------------KLEVSPGEIAVLPQGFRFAVSLP-DGPSRG 218 (478)
Q Consensus 165 ~f~NaDGD~Li~pq~G~l~l~T--------EfG------------~L~v~pGd~vVIPRGi~frv~l~-~g~~rg 218 (478)
.-....++|++++.+|++.+.. +-. ...++|||+++||+|+.+++.-. +.+++.
T Consensus 58 ~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~ 132 (239)
T 2xlg_A 58 PHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPI 132 (239)
T ss_dssp SEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEECCSSSCEEE
T ss_pred CeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCCEEEEeCCCCCEEE
Confidence 5577789999999999999987 544 78899999999999999998753 446777
No 48
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=96.27 E-value=0.03 Score=55.33 Aligned_cols=57 Identities=16% Similarity=0.240 Sum_probs=45.4
Q ss_pred ceecCCCCEEEEEEeCcEEEEeec--e---eeeecCCcEEEEcceeEEEEECCC-CCeeEEEE
Q 011768 165 AFCNADGDFLVVPQKGRLWIATEC--G---KLEVSPGEIAVLPQGFRFAVSLPD-GPSRGYIA 221 (478)
Q Consensus 165 ~f~NaDGD~Li~pq~G~l~l~TEf--G---~L~v~pGd~vVIPRGi~frv~l~~-g~~rgyi~ 221 (478)
.-.+.+++|++++.+|++++.... | ...+++||+++||.|+.+++.-.+ .+++.+++
T Consensus 67 ~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v 129 (361)
T 2vqa_A 67 LHWHANAAEWAYVMEGRTRITLTSPEGKVEIADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLV 129 (361)
T ss_dssp EEECTTCCEEEEEEESEEEEEEECTTSCEEEEEEETTEEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred ceeCCCCCEEEEEEEeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Confidence 346677999999999999999842 3 478999999999999999986543 46666544
No 49
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=96.19 E-value=0.0099 Score=56.05 Aligned_cols=55 Identities=13% Similarity=0.226 Sum_probs=43.8
Q ss_pred CCCCEEEEEEeCcEEEEeece-----eeeecCCcEEEEcceeEEEEECCCCCeeEEEEEEc
Q 011768 169 ADGDFLVVPQKGRLWIATECG-----KLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 224 (478)
Q Consensus 169 aDGD~Li~pq~G~l~l~TEfG-----~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~~ 224 (478)
.+-+||+++.+|++.+..+-+ .+.+++||+++||.|+.+++...++ .....+-.|
T Consensus 102 H~~~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~-~~~~airlF 161 (191)
T 1vr3_A 102 HLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEK-NYVKAMRLF 161 (191)
T ss_dssp CSSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTT-CCEEEEEEE
T ss_pred CCcceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCC-CCEEEEEEE
Confidence 345999999999999999875 6799999999999999999987443 334444444
No 50
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=96.16 E-value=0.024 Score=54.62 Aligned_cols=108 Identities=15% Similarity=0.225 Sum_probs=80.2
Q ss_pred CccccCCCCCC-CCCCCcccc--eeeeeecCCcccccccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEee-cee
Q 011768 115 TQLRWKPVDIP-DSPTDFIDG--LYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATE-CGK 190 (478)
Q Consensus 115 ~~lrW~p~~~p-~~~~Dfv~g--l~tl~g~gD~~~~~G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TE-fG~ 190 (478)
.+|+|.----. ..+.||.++ --.|+|-+-+...+.+.+.++.....-..+. -...++|++++.+|++.++.+ -..
T Consensus 94 ~~L~Wr~~y~~~~~~~~f~~~~a~~elvGP~g~~~s~~l~lG~v~l~PG~~yP~-HsHp~EEiy~VLsG~~e~~v~~g~~ 172 (217)
T 4b29_A 94 PHVEWRHSYTEAEVGRDFLNRFGWFELAGPSGHFLTQSLRVTVGYWGPGLDYGW-HEHLPEELYSVVSGRALFHLRNAPD 172 (217)
T ss_dssp GGSBCBCCSCHHHHCHHHHHHEEEEEEEETTSSEECSSCEEEEEEECSSCEEEE-EECSSEEEEEEEEECEEEEETTSCC
T ss_pred CCCeEeeccCCCCcChhHHhCceEEEEECCCCCCCCCeEEEEEEEECCCCcCCC-CCCCCceEEEEEeCCEEEEECCCCE
Confidence 45667643221 012367664 3578888888778888888877765542222 244589999999999999988 777
Q ss_pred eeecCCcEEEEcceeEEEEECCCCCeeEEEEEE
Q 011768 191 LEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEI 223 (478)
Q Consensus 191 L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~ 223 (478)
..++|||.++||.|+.+.+...+.|...++|-.
T Consensus 173 ~~l~pGd~v~ipsgv~Ha~rt~dePllalwvW~ 205 (217)
T 4b29_A 173 LMLEPGQTRFHPANAPHAMTTLTDPILTLVLWR 205 (217)
T ss_dssp EEECTTCEEEECTTCCEEEECCSSCEEEEEEEE
T ss_pred EecCCCCEEEcCCCCceeEEECCccEEEEEEEe
Confidence 889999999999999999997777888888775
No 51
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=96.11 E-value=0.062 Score=52.03 Aligned_cols=57 Identities=11% Similarity=0.105 Sum_probs=48.7
Q ss_pred ceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECCCCCeeEEEE
Q 011768 165 AFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIA 221 (478)
Q Consensus 165 ~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~ 221 (478)
.-++..+++++++.+|++.+..+--...+++||+++||.|+.+++.-.+.+++.+++
T Consensus 233 ~h~H~~~~e~~~vl~G~~~~~i~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~l~v 289 (337)
T 1y3t_A 233 DHYHEYHTETFYCLEGQMTMWTDGQEIQLNPGDFLHVPANTVHSYRLDSHYTKMVGV 289 (337)
T ss_dssp CEECSSCEEEEEEEESCEEEEETTEEEEECTTCEEEECTTCCEEEEECSSSEEEEEE
T ss_pred CcCCCCCcEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCeEEEEECCCCeEEEEE
Confidence 445666899999999999999999999999999999999999999765446666655
No 52
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=96.09 E-value=0.045 Score=47.99 Aligned_cols=74 Identities=7% Similarity=0.056 Sum_probs=53.3
Q ss_pred cccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeecee-eeecCCcEEEEcceeEEEEECC-CCCeeEEEEE
Q 011768 148 HGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGK-LEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAE 222 (478)
Q Consensus 148 ~G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~-L~v~pGd~vVIPRGi~frv~l~-~g~~rgyi~E 222 (478)
.++.+............ .-..++.+++++.+|++.++.+-.. ..+++||+++||.|+.+++... +.+++.+.+-
T Consensus 46 ~~~~~~~~~~~pg~~~~-~H~H~~~E~~~Vl~G~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~ 121 (147)
T 2f4p_A 46 FNTQVYDVVFEPGARTH-WHSHPGGQILIVTRGKGFYQERGKPARILKKGDVVEIPPNVVHWHGAAPDEELVHIGIS 121 (147)
T ss_dssp SSCEEEEEEECTTCEEC-SEECTTCEEEEEEEEEEEEEETTSCCEEEETTCEEEECTTCCEEEEEBTTBCEEEEEEE
T ss_pred CcEEEEEEEECCCCccC-ceECCCceEEEEEeCEEEEEECCEEEEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 35555555554332111 2345679999999999999999887 9999999999999999998753 3355555444
No 53
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=96.06 E-value=0.03 Score=48.05 Aligned_cols=51 Identities=6% Similarity=-0.022 Sum_probs=44.3
Q ss_pred CCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECC-CCCeeEEEE
Q 011768 171 GDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIA 221 (478)
Q Consensus 171 GD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~-~g~~rgyi~ 221 (478)
-++++++.+|++.+..+-....+++||.++||.|+.+++.-. +.+++.+++
T Consensus 78 ~~E~~~Vl~G~~~~~i~~~~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l~v 129 (133)
T 1o4t_A 78 EFEIYYILLGEGVFHDNGKDVPIKAGDVCFTDSGESHSIENTGNTDLEFLAV 129 (133)
T ss_dssp EEEEEEEEESEEEEEETTEEEEEETTEEEEECTTCEEEEECCSSSCEEEEEE
T ss_pred ccEEEEEEeCEEEEEECCEEEEeCCCcEEEECCCCcEEeEECCCCCEEEEEE
Confidence 489999999999999999999999999999999999999754 346666554
No 54
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=96.01 E-value=0.052 Score=51.81 Aligned_cols=78 Identities=6% Similarity=-0.118 Sum_probs=54.7
Q ss_pred ccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECC-C-CCeeEEEEEEcCC
Q 011768 149 GYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP-D-GPSRGYIAEIFGT 226 (478)
Q Consensus 149 G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~-~-g~~rgyi~E~~~~ 226 (478)
.+.+.+......-....-...+++|++++.+|++.+..+--...+++||.++||.|+.+++.-. + .+++.++.--.+.
T Consensus 178 ~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l~~~d~~r 257 (261)
T 1rc6_A 178 DMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNR 257 (261)
T ss_dssp SEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEESSSCEEEEETTCEEEECSSEEEEEEEC----CEEEEEEEECSC
T ss_pred ceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEECCEEEEeCCCCEEEECCCCcEEeEeCCCCcCEEEEEEecCCC
Confidence 3444444443322122334567899999999999999998899999999999999999998653 4 5667665543333
No 55
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=95.93 E-value=0.041 Score=51.60 Aligned_cols=67 Identities=15% Similarity=0.122 Sum_probs=49.9
Q ss_pred EEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECCCCCeeEE
Q 011768 151 AIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGY 219 (478)
Q Consensus 151 ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~~g~~rgy 219 (478)
.+.+++..+--.- -.-..++|+++++.+|++.|..+--...+++||+++||.|+.+++.-.+ +++.+
T Consensus 38 ~~~~~~~~~G~~~-~~h~h~~~~~~~Vl~G~~~~~i~~~~~~l~~Gd~~~~p~~~~H~~~a~~-~~~~l 104 (227)
T 3rns_A 38 YISLFSLAKDEEI-TAEAMLGNRYYYCFNGNGEIFIENNKKTISNGDFLEITANHNYSIEARD-NLKLI 104 (227)
T ss_dssp EEEEEEECTTCEE-EECSCSSCEEEEEEESEEEEEESSCEEEEETTEEEEECSSCCEEEEESS-SEEEE
T ss_pred EEEEEEECCCCcc-CccccCCCEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCCEEEEECC-CcEEE
Confidence 3455555432211 1234589999999999999999988899999999999999999997633 44443
No 56
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=95.66 E-value=0.028 Score=51.70 Aligned_cols=53 Identities=17% Similarity=0.171 Sum_probs=43.8
Q ss_pred CCCEEEEEEeCcEEEEeecee-----eeecCCcEEEEcceeEEEEEC-CCCCeeEEEEE
Q 011768 170 DGDFLVVPQKGRLWIATECGK-----LEVSPGEIAVLPQGFRFAVSL-PDGPSRGYIAE 222 (478)
Q Consensus 170 DGD~Li~pq~G~l~l~TEfG~-----L~v~pGd~vVIPRGi~frv~l-~~g~~rgyi~E 222 (478)
+.+|++++.+|++.+..+-.. ..+++||.++||.|+.+++.- .+.+++.+++-
T Consensus 95 ~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H~~~N~g~~~~~~l~v~ 153 (190)
T 1x82_A 95 DRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGDEPFIFLAIY 153 (190)
T ss_dssp TCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEEEECSSSCEEEEEEE
T ss_pred CCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeEEEEECCcccEEEEEEE
Confidence 568999999999999988755 999999999999999999864 34466655543
No 57
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=95.57 E-value=0.013 Score=48.81 Aligned_cols=59 Identities=14% Similarity=0.072 Sum_probs=45.8
Q ss_pred cCCCCEEEEEEeCcEEEEeecee---eeecCCcEEEEcceeEEEEEC-CCCCeeEEEEEEcCC
Q 011768 168 NADGDFLVVPQKGRLWIATECGK---LEVSPGEIAVLPQGFRFAVSL-PDGPSRGYIAEIFGT 226 (478)
Q Consensus 168 NaDGD~Li~pq~G~l~l~TEfG~---L~v~pGd~vVIPRGi~frv~l-~~g~~rgyi~E~~~~ 226 (478)
..+..++++..+|++++..+-|. ..+++||.+++|.|+.+++.= .+.+.+.+.+|.-++
T Consensus 35 H~~~~~iv~v~~G~~~~~~~dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~vE~k~~ 97 (98)
T 2ozi_A 35 HGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEIELKAG 97 (98)
T ss_dssp CCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEEEEECC-
T ss_pred CCCCEEEEEEeeEEEEEEeCCCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEEEEEcCC
Confidence 33334555678999999998996 589999999999999999964 455889999997543
No 58
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=95.47 E-value=0.057 Score=50.62 Aligned_cols=71 Identities=23% Similarity=0.163 Sum_probs=54.0
Q ss_pred cEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECCCCCeeEEEE
Q 011768 150 YAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIA 221 (478)
Q Consensus 150 ~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~ 221 (478)
+.+.++........ -.-...+++++++.+|++.+..+-....+++||.++||.|+.+++....++++.+++
T Consensus 153 ~~~~~~~~~~G~~~-~~H~H~~~e~~~Vl~G~~~~~i~g~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~ll~ 223 (227)
T 3rns_A 153 LVMTIMSFWKGESL-DPHKAPGDALVTVLDGEGKYYVDGKPFIVKKGESAVLPANIPHAVEAETENFKMLLI 223 (227)
T ss_dssp EEEEEEEECTTCEE-EEECCSSEEEEEEEEEEEEEEETTEEEEEETTEEEEECTTSCEEEECCSSCEEEEEE
T ss_pred eEEEEEEECCCCcc-CCEECCCcEEEEEEeEEEEEEECCEEEEECCCCEEEECCCCcEEEEeCCCCEEEEEE
Confidence 45566666543322 234567999999999999999999999999999999999999999762335665554
No 59
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=95.47 E-value=0.025 Score=48.38 Aligned_cols=56 Identities=14% Similarity=0.136 Sum_probs=47.8
Q ss_pred CCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECCC--CCeeEEEEEEc
Q 011768 169 ADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPD--GPSRGYIAEIF 224 (478)
Q Consensus 169 aDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~~--g~~rgyi~E~~ 224 (478)
.|.-+|+++.+|++.+..+.....+++||+++||.|+.+++...+ ++.+.+++-..
T Consensus 36 h~~~~i~~v~~G~~~~~i~~~~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i~f~ 93 (164)
T 2arc_A 36 MKGYILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFR 93 (164)
T ss_dssp CSSEEEEEEEEECEEEEETTEEEEECTTCEEEECTTCCEEEEECTTSSEEEEEEEEEC
T ss_pred CCceEEEEEEEeEEEEEECCEEEEecCCeEEEEcCCCCEEEEeCCCCCcEEEEEEEEC
Confidence 456689999999999999999999999999999999999987643 45677777654
No 60
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=95.34 E-value=0.12 Score=47.66 Aligned_cols=61 Identities=18% Similarity=0.164 Sum_probs=49.8
Q ss_pred cCCCCEEEEEEeCcEEEEeece-eeeecCCcEEEEcceeEEEEEC-CCCCeeEEEEEEcCCeee
Q 011768 168 NADGDFLVVPQKGRLWIATECG-KLEVSPGEIAVLPQGFRFAVSL-PDGPSRGYIAEIFGTHFQ 229 (478)
Q Consensus 168 NaDGD~Li~pq~G~l~l~TEfG-~L~v~pGd~vVIPRGi~frv~l-~~g~~rgyi~E~~~~~~~ 229 (478)
...+++.+++.+|++.|+.+-| ...+++||.+ ||+|+.+++.- .+.++|.+++=+.+..+.
T Consensus 96 ~H~~eE~~~VLeGel~l~ld~ge~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V~~P~~p~~ 158 (172)
T 3es1_A 96 RTNSIDYGIVLEGEIELELDDGAKRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFILIEAPAYL 158 (172)
T ss_dssp CCSEEEEEEEEESCEEEECGGGCEEEECTTCEE-EECSCCBEEECCSSSCEEEEEEEEECCCCE
T ss_pred ecCceEEEEEEeCEEEEEECCCeEEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEEEcCCCcee
Confidence 4577889999999999998855 6789999999 99999999965 355889888877655443
No 61
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=95.30 E-value=0.14 Score=50.55 Aligned_cols=75 Identities=11% Similarity=0.134 Sum_probs=52.5
Q ss_pred ccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEe--ece---eeeecCCcEEEEcceeEEEEECC-CCCeeEEEEE
Q 011768 149 GYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIAT--ECG---KLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAE 222 (478)
Q Consensus 149 G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~T--EfG---~L~v~pGd~vVIPRGi~frv~l~-~g~~rgyi~E 222 (478)
++.+.+......-....-.+.+.++++++.+|++.+.- +-| ...+++||+++||+|+.+++.-. +.+++.+++-
T Consensus 233 ~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~ 312 (361)
T 2vqa_A 233 NMTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTVFASEGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVF 312 (361)
T ss_dssp TCEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEEECSTTCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEE
T ss_pred cceEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEEEcCCCcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEE
Confidence 45555555443221223456666999999999999876 245 68999999999999999998653 3466655554
Q ss_pred E
Q 011768 223 I 223 (478)
Q Consensus 223 ~ 223 (478)
.
T Consensus 313 ~ 313 (361)
T 2vqa_A 313 N 313 (361)
T ss_dssp S
T ss_pred C
Confidence 3
No 62
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=95.25 E-value=0.044 Score=55.06 Aligned_cols=56 Identities=11% Similarity=0.079 Sum_probs=46.2
Q ss_pred eecCCCCEEEEEEeCcEEEEeec-----eeeeecCCcEEEEcceeEEEEECCCCCeeEEEE
Q 011768 166 FCNADGDFLVVPQKGRLWIATEC-----GKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIA 221 (478)
Q Consensus 166 f~NaDGD~Li~pq~G~l~l~TEf-----G~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~ 221 (478)
-...+++|++++.+|++.+..+- -...+++||+++||+|+.+++.-.++..+.+++
T Consensus 66 H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~~~l~v 126 (350)
T 1juh_A 66 HIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDTEMTGV 126 (350)
T ss_dssp EECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTEEEEEE
T ss_pred ccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCCEEEEE
Confidence 35667999999999999999887 688999999999999999999764444455444
No 63
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=95.21 E-value=0.032 Score=54.44 Aligned_cols=56 Identities=16% Similarity=0.245 Sum_probs=49.2
Q ss_pred cCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECC-CCCeeEEEEEE
Q 011768 168 NADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAEI 223 (478)
Q Consensus 168 NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~-~g~~rgyi~E~ 223 (478)
..+++|++++.+|++.|+.+--...+++||+++||.|+.+++.-. +.+++.+++..
T Consensus 87 ~H~~eE~~~Vl~G~l~v~v~g~~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l~v~~ 143 (278)
T 1sq4_A 87 DPNAEAVLFVVEGELSLTLQGQVHAMQPGGYAFIPPGADYKVRNTTGQHTRFHWIRK 143 (278)
T ss_dssp CTTEEEEEEEEESCEEEEESSCEEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEE
T ss_pred CCCceEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCcEEEEECCCCCEEEEEEEe
Confidence 457899999999999999998899999999999999999999753 45788887764
No 64
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=95.18 E-value=0.063 Score=50.53 Aligned_cols=76 Identities=14% Similarity=0.125 Sum_probs=59.5
Q ss_pred ccccEEEEEEeCCCCCCcce--ecCCCCEEEEEEeCcEEEEeece---eeeecCCcEEEEcceeEEEEECC---CCCeeE
Q 011768 147 RHGYAIHMYTANKSMDNCAF--CNADGDFLVVPQKGRLWIATECG---KLEVSPGEIAVLPQGFRFAVSLP---DGPSRG 218 (478)
Q Consensus 147 ~~G~ai~~y~~~~sM~~~~f--~NaDGD~Li~pq~G~l~l~TEfG---~L~v~pGd~vVIPRGi~frv~l~---~g~~rg 218 (478)
+.++-+.+|...+.- ...| .-.|-=+|+++.+|++. ..+.. ...+.+||+++||.|..+++... +++.++
T Consensus 4 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~v~~G~~~-~i~~~~~~~~~l~~g~l~~i~p~~~h~~~~~~~~~~~~~~ 81 (276)
T 3gbg_A 4 KKSFQTNVYRMSKFD-TYIFNNLYINDYKMFWIDSGIAK-LIDKNCLVSYEINSSSIILLKKNSIQRFSLTSLSDENINV 81 (276)
T ss_dssp CTTEEEEEEEECTTC-EEEEEEEECSSCEEEEESSSCEE-EEETTTTEEEEECTTEEEEECTTCEEEEEEEECCSSCEEE
T ss_pred chhhhhhhhhhhccc-chhccHhhhcceEEEEEecCceE-EECCccceeEEEcCCCEEEEcCCCceeeccccCCCcceEE
Confidence 456777999987552 2122 12477799999999999 99999 99999999999999999998764 356788
Q ss_pred EEEEEc
Q 011768 219 YIAEIF 224 (478)
Q Consensus 219 yi~E~~ 224 (478)
+++-..
T Consensus 82 ~~i~f~ 87 (276)
T 3gbg_A 82 SVITIS 87 (276)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 888653
No 65
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=95.08 E-value=0.033 Score=52.72 Aligned_cols=55 Identities=9% Similarity=-0.028 Sum_probs=46.2
Q ss_pred ecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECC-CCCeeEEEE
Q 011768 167 CNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIA 221 (478)
Q Consensus 167 ~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~-~g~~rgyi~ 221 (478)
-...+++++++.+|++.++++-....+++||.++||.|+.+++.-. +.+++.+.+
T Consensus 162 H~H~~~e~~~Vl~G~~~~~i~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v 217 (243)
T 3h7j_A 162 HKHRNEQIGICIGGGYDMTVEGCTVEMKFGTAYFCEPREDHGAINRSEKESKSINI 217 (243)
T ss_dssp ECCSSEEEEEECSSCEEEEETTEEEEECTTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred EeCCCcEEEEEEECEEEEEECCEEEEECCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 4456899999999999999999999999999999999999998753 345555443
No 66
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=95.02 E-value=0.14 Score=49.30 Aligned_cols=82 Identities=9% Similarity=-0.026 Sum_probs=57.4
Q ss_pred ccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECC-C-CCeeEEEEEEcCC
Q 011768 149 GYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP-D-GPSRGYIAEIFGT 226 (478)
Q Consensus 149 G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~-~-g~~rgyi~E~~~~ 226 (478)
.+.+.+......-.....-..++++++++.+|++.+..+--...+++||+++||.|+.+++.-. + .+.+.+++=.+..
T Consensus 181 ~~~~~~~~l~pg~~~~~~H~H~~~E~~yVl~G~~~~~i~~~~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l~~~~~~r 260 (274)
T 1sef_A 181 DMNMHILSFEPGASHAYIETHVQEHGAYLISGQGMYNLDNEWYPVEKGDYIFMSAYVPQAAYAVGREEPLMYVYSKDANR 260 (274)
T ss_dssp SEEEEEEEECTTCBCSSCBCCSCCEEEEEEECEEEEEETTEEEEEETTCEEEECTTCCEEEEEECSSSCEEEEEEEECSS
T ss_pred CEEEEEEEECCCCccCcceeccCeEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCCEEEEeCCCCCCEEEEEEEcCCC
Confidence 4445544443322111213447899999999999999999999999999999999999988653 3 4567666544445
Q ss_pred eeee
Q 011768 227 HFQL 230 (478)
Q Consensus 227 ~~~L 230 (478)
++.|
T Consensus 261 ~~~~ 264 (274)
T 1sef_A 261 EPEL 264 (274)
T ss_dssp CCCC
T ss_pred Cccc
Confidence 5544
No 67
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=94.92 E-value=0.038 Score=52.27 Aligned_cols=54 Identities=9% Similarity=-0.034 Sum_probs=44.9
Q ss_pred cCCCCEEEEEEeCcEEEEeeceeeeecCCcEE-EEcceeEEEEECCC-CCeeEEEE
Q 011768 168 NADGDFLVVPQKGRLWIATECGKLEVSPGEIA-VLPQGFRFAVSLPD-GPSRGYIA 221 (478)
Q Consensus 168 NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~v-VIPRGi~frv~l~~-g~~rgyi~ 221 (478)
-..+++++++.+|++.+.++-....++|||.+ +||.|+.+++.-.+ .+++.+-+
T Consensus 51 ~H~~~e~~~Vl~G~~~~~~~~~~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~i 106 (243)
T 3h7j_A 51 QHKEVQIGMVVSGELMMTVGDVTRKMTALESAYIAPPHVPHGARNDTDQEVIAIDI 106 (243)
T ss_dssp CCSSEEEEEEEESEEEEEETTEEEEEETTTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred ECCCcEEEEEEEeEEEEEECCEEEEECCCCEEEEcCCCCcEeeEeCCCCcEEEEEE
Confidence 35689999999999999999999999999999 59999999997643 35554433
No 68
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=94.85 E-value=0.049 Score=49.04 Aligned_cols=49 Identities=8% Similarity=-0.094 Sum_probs=42.8
Q ss_pred cCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECC-CCCe
Q 011768 168 NADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP-DGPS 216 (478)
Q Consensus 168 NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~-~g~~ 216 (478)
..+++|++++.+|++.+..+--...+++||.++||.|+.+++.-. +.++
T Consensus 123 ~h~~~E~~~Vl~G~~~~~~~~~~~~l~~GD~i~i~~~~~H~~~n~~~~~~ 172 (192)
T 1y9q_A 123 ALGVIEYIHVLEGIMKVFFDEQWHELQQGEHIRFFSDQPHGYAAVTEKAV 172 (192)
T ss_dssp STTCEEEEEEEESCEEEEETTEEEEECTTCEEEEECSSSEEEEESSSCEE
T ss_pred CCCCEEEEEEEEeEEEEEECCEEEEeCCCCEEEEcCCCCeEeECCCCCcE
Confidence 356799999999999999998889999999999999999999754 3455
No 69
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=94.60 E-value=0.25 Score=49.38 Aligned_cols=75 Identities=11% Similarity=-0.010 Sum_probs=51.9
Q ss_pred ccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEee--c---eeeeecCCcEEEEcceeEEEEECC-CCCeeEEEEE
Q 011768 149 GYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATE--C---GKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAE 222 (478)
Q Consensus 149 G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TE--f---G~L~v~pGd~vVIPRGi~frv~l~-~g~~rgyi~E 222 (478)
++.+.+......-....-++...+|++++.+|+++++-. - -...+++||.++||.|+.+++.-. +.+++.+++-
T Consensus 256 ~~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~ 335 (385)
T 1j58_A 256 TIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIF 335 (385)
T ss_dssp SCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEETTEEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEE
T ss_pred ceEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCCCcEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEE
Confidence 466665555433212233454449999999999988865 3 358999999999999999998643 4466666554
Q ss_pred E
Q 011768 223 I 223 (478)
Q Consensus 223 ~ 223 (478)
.
T Consensus 336 ~ 336 (385)
T 1j58_A 336 K 336 (385)
T ss_dssp S
T ss_pred C
Confidence 3
No 70
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=94.47 E-value=0.12 Score=51.77 Aligned_cols=64 Identities=11% Similarity=0.059 Sum_probs=44.9
Q ss_pred ccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEee--ce---eeeecCCcEEEEcceeEEEEECCC
Q 011768 149 GYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATE--CG---KLEVSPGEIAVLPQGFRFAVSLPD 213 (478)
Q Consensus 149 G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TE--fG---~L~v~pGd~vVIPRGi~frv~l~~ 213 (478)
++.+........-....-.+. ++|++++.+|++++... -| ...+++||+++||+|+.+++.-.+
T Consensus 78 ~~~~~~~~l~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~ 146 (385)
T 1j58_A 78 NLASVNMRLKPGAIRELHWHK-EAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALE 146 (385)
T ss_dssp SCEEEEEEECTTCEEEEEEES-SCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEEEE
T ss_pred ceEEEEEEECCCCCCCCccCC-hheEEEEEeeeEEEEEEeCCCcEEEEEeCCCCEEEECCCCeEEEEECC
Confidence 555554443332212223444 89999999999999884 34 347999999999999999986533
No 71
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=94.36 E-value=0.088 Score=55.94 Aligned_cols=78 Identities=18% Similarity=0.266 Sum_probs=51.7
Q ss_pred cceeeeeecCC-cccc-cccEEEEEEeCC-CCCCcceecCCCCEEEEEEeCcEEEEeec--ee----eeecCCcEEEEcc
Q 011768 133 DGLYTICGAGS-SFLR-HGYAIHMYTANK-SMDNCAFCNADGDFLVVPQKGRLWIATEC--GK----LEVSPGEIAVLPQ 203 (478)
Q Consensus 133 ~gl~tl~g~gD-~~~~-~G~ai~~y~~~~-sM~~~~f~NaDGD~Li~pq~G~l~l~TEf--G~----L~v~pGd~vVIPR 203 (478)
.|..+.+-.-+ |.++ .|+++....... .| ...-.+.++++++++.+|++++.-.- |. -.|++||++|||+
T Consensus 348 gG~v~~~~~~~~P~L~~lgls~a~v~l~pG~~-~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~vvP~ 426 (493)
T 2d5f_A 348 AGRISTLNSLTLPALRQFGLSAQYVVLYRNGI-YSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLVVPQ 426 (493)
T ss_dssp TEEEEEESTTTSTTHHHHTCEEEEEEECTTCE-EEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECT
T ss_pred CeEEEEeccccCccccccceEEEEEEccCCce-eeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEEECC
Confidence 34444443333 4443 245555544333 33 33557888999999999999987443 32 3499999999999
Q ss_pred eeEEEEEC
Q 011768 204 GFRFAVSL 211 (478)
Q Consensus 204 Gi~frv~l 211 (478)
|+.+.+.-
T Consensus 427 G~~H~~~n 434 (493)
T 2d5f_A 427 NFVVAEQG 434 (493)
T ss_dssp TCEEEEEE
T ss_pred CCeEeeee
Confidence 99998764
No 72
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=94.33 E-value=0.073 Score=55.16 Aligned_cols=57 Identities=21% Similarity=0.352 Sum_probs=43.8
Q ss_pred cCCCCEEEEEEeCcEEEEee----ceeeeecCCcEEEEcceeEEEEECCCCCeeEEEEEEc
Q 011768 168 NADGDFLVVPQKGRLWIATE----CGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 224 (478)
Q Consensus 168 NaDGD~Li~pq~G~l~l~TE----fG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~~ 224 (478)
..+.++++|+.+|++++... .-...+++||+++||+|+.+.+.-.++.....+++++
T Consensus 66 h~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e~l~~l~~~ 126 (416)
T 1uij_A 66 HADADFLLFVLSGRAILTLVNNDDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLA 126 (416)
T ss_dssp EESEEEEEEEEESCEEEEEECSSCEEEEEECTTEEEEECTTCEEEEEECCSSCCEEEEEEE
T ss_pred cCCCceEEEEEeeEEEEEEEECCCCeEEEecCCCEEEECCCCeEEEEecCCCCCEEEEEEe
Confidence 66899999999999998742 2256799999999999999998654333445555554
No 73
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=94.28 E-value=0.023 Score=52.83 Aligned_cols=44 Identities=7% Similarity=0.023 Sum_probs=36.6
Q ss_pred CCCEEEEEEeCcEEEEee-cee---eeecCCcEEEEcceeEEEEECCC
Q 011768 170 DGDFLVVPQKGRLWIATE-CGK---LEVSPGEIAVLPQGFRFAVSLPD 213 (478)
Q Consensus 170 DGD~Li~pq~G~l~l~TE-fG~---L~v~pGd~vVIPRGi~frv~l~~ 213 (478)
+-+|++++.+|++.+.-+ -|. +.+++||+++||.|+.+++...+
T Consensus 99 ~~~Ei~~Vl~G~g~~~i~~~d~~~~~~l~~GDli~IP~g~~H~~~~~~ 146 (179)
T 1zrr_A 99 GEDEVRFFVEGAGLFCLHIGDEVFQVLCEKNDLISVPAHTPHWFDMGS 146 (179)
T ss_dssp SSCEEEEEEESCCCCCEECSSCEEEEECCCSCEEEECTTCCBCCCCSS
T ss_pred ChheEEEEEcceEEEEEEeCCEEEEEEECCCCEEEECCCCeEeeecCC
Confidence 459999999999988654 343 77999999999999999987643
No 74
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=94.11 E-value=0.069 Score=50.93 Aligned_cols=56 Identities=13% Similarity=0.107 Sum_probs=48.8
Q ss_pred cCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEEC-CCCCeeEEEEEE
Q 011768 168 NADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSL-PDGPSRGYIAEI 223 (478)
Q Consensus 168 NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l-~~g~~rgyi~E~ 223 (478)
...+++++++.+|++.|..+--...+++||.+.+|.|+.+++.- .+.++|.+++..
T Consensus 78 ~~~~ee~~~Vl~G~l~~~~~~~~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~v~~ 134 (261)
T 1rc6_A 78 GEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKR 134 (261)
T ss_dssp CTTEEEEEEEEESEEEEEETTEEEEEETTEEEEECTTCCCEEEECSSSCEEEEEEEE
T ss_pred CCCceEEEEEEEeEEEEEECCEEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEe
Confidence 35679999999999999999888999999999999999999964 345888888764
No 75
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=93.87 E-value=0.36 Score=48.63 Aligned_cols=73 Identities=12% Similarity=0.007 Sum_probs=50.6
Q ss_pred cccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEE-EeeceeeeecCCcEEEEcceeEEEEECC-CCCeeEEEE
Q 011768 148 HGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWI-ATECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIA 221 (478)
Q Consensus 148 ~G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l-~TEfG~L~v~pGd~vVIPRGi~frv~l~-~g~~rgyi~ 221 (478)
..+.+.+......-....-+ .++++++++.+|++.+ ..+--...+++||+++||.|+.+++.-. +++++.+.+
T Consensus 98 ~~l~~~~~~l~PG~~~~~H~-H~~~e~~yVl~G~g~~t~v~g~~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v 172 (354)
T 2d40_A 98 ATLYAGLQLIMPGEVAPSHR-HNQSALRFIVEGKGAFTAVDGERTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDG 172 (354)
T ss_dssp SSCEEEEEEECTTCEEEEEE-ESSCEEEEEEECSSCEEEETTEEEECCTTCEEEECTTSCEEEECCSSSCEEEEEE
T ss_pred CcEEEEEEEECCCCCcCCee-cCcceEEEEEEEEEEEEEECCEEEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 34555555554332122223 3688999999999988 5555578899999999999999998653 446555544
No 76
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=93.85 E-value=0.35 Score=51.13 Aligned_cols=78 Identities=18% Similarity=0.235 Sum_probs=52.3
Q ss_pred ceeeeeecC-Ccccc-cccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEe--ecee--ee--ecCCcEEEEccee
Q 011768 134 GLYTICGAG-SSFLR-HGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIAT--ECGK--LE--VSPGEIAVLPQGF 205 (478)
Q Consensus 134 gl~tl~g~g-D~~~~-~G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~T--EfG~--L~--v~pGd~vVIPRGi 205 (478)
|..+.+-.- =|.++ .|+++.......---...-.+..+++++++.+|++++.- +.|. +. |++||++|||+|+
T Consensus 320 G~v~~~~~~~~P~L~~l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~ 399 (476)
T 1fxz_A 320 GSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNF 399 (476)
T ss_dssp EEEEEECTTTSGGGTTTTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTC
T ss_pred eEEEEeccccCcccccCcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCC
Confidence 444443333 34443 266655555444222335578889999999999999864 3342 33 9999999999999
Q ss_pred EEEEEC
Q 011768 206 RFAVSL 211 (478)
Q Consensus 206 ~frv~l 211 (478)
.+.+.-
T Consensus 400 ~H~~~n 405 (476)
T 1fxz_A 400 VVAARS 405 (476)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 998865
No 77
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=93.84 E-value=0.046 Score=52.06 Aligned_cols=52 Identities=13% Similarity=0.083 Sum_probs=47.3
Q ss_pred CCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECCCCCeeEEEEEE
Q 011768 171 GDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEI 223 (478)
Q Consensus 171 GD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~ 223 (478)
+++.+++.+|++.|+.+--...+++||.+.||.|+.+++.-. ++++.+++..
T Consensus 68 ~ee~~~Vl~G~~~~~~~~~~~~l~~Gd~~~~p~~~~H~~~n~-~~~~~l~v~~ 119 (246)
T 1sfn_A 68 YQRFAFVLSGEVDVAVGGETRTLREYDYVYLPAGEKHMLTAK-TDARVSVFEK 119 (246)
T ss_dssp SEEEEEEEEEEEEEECSSCEEEECTTEEEEECTTCCCEEEEE-EEEEEEEEEE
T ss_pred eeEEEEEEECEEEEEECCEEEEECCCCEEEECCCCCEEEEeC-CCEEEEEEEe
Confidence 999999999999999998899999999999999999998754 6788888774
No 78
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=93.83 E-value=0.35 Score=50.04 Aligned_cols=88 Identities=15% Similarity=0.132 Sum_probs=62.3
Q ss_pred cceeeeeecCC----cccccccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEE
Q 011768 133 DGLYTICGAGS----SFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFA 208 (478)
Q Consensus 133 ~gl~tl~g~gD----~~~~~G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~fr 208 (478)
+|+.....|-+ +...-++.+.+..+..+. ..-+.. .++++++.+|++.+..+--+..+++||+++||.|..++
T Consensus 275 ~~~~l~l~nP~~g~~~~~tl~~~~~~l~PG~~~--~~HrH~-~~~v~~VleG~G~~~V~ge~~~~~~GD~~~iP~g~~H~ 351 (394)
T 3bu7_A 275 DGLILRYTNPQTGGHPMLTMGASMQMLRPGEHT--KAHRHT-GNVIYNVAKGQGYSIVGGKRFDWSEHDIFCVPAWTWHE 351 (394)
T ss_dssp TBEEEEECCTTTSSCSSSSCEEEEEEECTTCBC--CCEEES-SCEEEEEEECCEEEEETTEEEEECTTCEEEECTTCCEE
T ss_pred CceEEEEeCCCCCCCCCCeeeEEEEEECCCCcC--CCcccC-CcEEEEEEeCeEEEEECCEEEEEeCCCEEEECCCCeEE
Confidence 56666665522 222335555666666554 244544 67899999999988777778999999999999999999
Q ss_pred EECC--CCCeeEEEEEE
Q 011768 209 VSLP--DGPSRGYIAEI 223 (478)
Q Consensus 209 v~l~--~g~~rgyi~E~ 223 (478)
+.-. +.+++.+.+..
T Consensus 352 ~~N~g~~e~~~ll~i~D 368 (394)
T 3bu7_A 352 HCNTQERDDACLFSFND 368 (394)
T ss_dssp EEECCSSCCEEEEEEES
T ss_pred eEeCCCCCCeEEEEeeC
Confidence 8643 35777777753
No 79
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=93.77 E-value=0.21 Score=45.15 Aligned_cols=99 Identities=10% Similarity=0.053 Sum_probs=61.5
Q ss_pred CCCCCccccCCCC-CCCCCCCcccceeeeeecCCcccccccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeece
Q 011768 111 YTTPTQLRWKPVD-IPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECG 189 (478)
Q Consensus 111 ~~~P~~lrW~p~~-~p~~~~Dfv~gl~tl~g~gD~~~~~G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG 189 (478)
.++.+.+.|.|+. .. .+. -++.|..+. .-..=+++--+.++...+. -...|.+.+++.+|++.+. |.|
T Consensus 11 ~v~~~~~~W~~~~~~~-~Gv----~~~~L~~d~--~~g~~v~lvr~~pG~~~p~---H~H~g~ee~~VL~G~~~~~-e~~ 79 (159)
T 3ebr_A 11 CLDGNDTPWMPFAPYS-NDV----MVKYFKIDP--VRGETITLLKAPAGMEMPR---HHHTGTVIVYTVQGSWRYK-EHD 79 (159)
T ss_dssp CCCGGGSCCEECTTTC-SSS----EEEEEEEET--TTTEEEEEEEECSSCBCCC---EEESSCEEEEEEESCEEET-TSS
T ss_pred EEcCCcCCcEeCCCCC-CCE----EEEEeeEcC--CCCeEEEEEEECCCCCccc---ccCCCCEEEEEEEeEEEEe-CCC
Confidence 4567888899854 21 222 244554432 1111223333455544432 3456788889999998863 555
Q ss_pred eeeecCCcEEEEcceeEEEEECC---CCCeeEEEE
Q 011768 190 KLEVSPGEIAVLPQGFRFAVSLP---DGPSRGYIA 221 (478)
Q Consensus 190 ~L~v~pGd~vVIPRGi~frv~l~---~g~~rgyi~ 221 (478)
-.+++||++.+|.|..++.... +..+..|++
T Consensus 80 -~~~~~Gd~~~~P~g~~H~~~~~~~~~e~~~~~~~ 113 (159)
T 3ebr_A 80 -WVAHAGSVVYETASTRHTPQSAYAEGPDIITFNI 113 (159)
T ss_dssp -CCBCTTCEEEECSSEEECEEESSSSSSCEEEEEE
T ss_pred -eEECCCeEEEECCCCcceeEeCCCCCCCEEEEEE
Confidence 3799999999999999988664 345666653
No 80
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=93.55 E-value=0.13 Score=53.76 Aligned_cols=53 Identities=26% Similarity=0.342 Sum_probs=41.4
Q ss_pred cCCCCEEEEEEeCcEEEEee----ceeeeecCCcEEEEcceeEEEEECCC--CCeeEEE
Q 011768 168 NADGDFLVVPQKGRLWIATE----CGKLEVSPGEIAVLPQGFRFAVSLPD--GPSRGYI 220 (478)
Q Consensus 168 NaDGD~Li~pq~G~l~l~TE----fG~L~v~pGd~vVIPRGi~frv~l~~--g~~rgyi 220 (478)
..+.++++|+.+|++++... .-...|++||+++||+|+.+.+.-.+ .+.+.+.
T Consensus 78 h~~a~Ei~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~~l~ 136 (434)
T 2ea7_A 78 HADADFLLVVLNGTAVLTLVNPDSRDSYILEQGHAQKIPAGTTFFLVNPDDNENLRIIK 136 (434)
T ss_dssp EESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEE
T ss_pred cCCCceEEEEEecEEEEEEEeCCCCEEEEeCCCCEEEECCCccEEEEeCCCCCCeEEEE
Confidence 67899999999999998763 23567999999999999999886533 2444443
No 81
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=93.41 E-value=0.16 Score=48.93 Aligned_cols=57 Identities=14% Similarity=0.179 Sum_probs=48.9
Q ss_pred ecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEEC-CCCCeeEEEEEE
Q 011768 167 CNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSL-PDGPSRGYIAEI 223 (478)
Q Consensus 167 ~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l-~~g~~rgyi~E~ 223 (478)
....+++++++.+|++.|..+--...+++||.+.+|.++.+++.- .+.++|.+++..
T Consensus 80 ~~~~~ee~~~Vl~G~l~~~~~~~~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l~v~~ 137 (274)
T 1sef_A 80 GGDGIQTLVYVIDGRLRVSDGQETHELEAGGYAYFTPEMKMYLANAQEADTEVFLYKK 137 (274)
T ss_dssp SBTTEEEEEEEEESEEEEECSSCEEEEETTEEEEECTTSCCEEEESSSSCEEEEEEEE
T ss_pred CCCCceEEEEEEEeEEEEEECCEEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEe
Confidence 345679999999999999998888999999999999999999864 355888887763
No 82
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=93.03 E-value=0.34 Score=51.67 Aligned_cols=47 Identities=13% Similarity=0.145 Sum_probs=37.5
Q ss_pred cCCCCCCCCCCCCCcccccceeeecccc-----c--cc---CCcCCCeeeeecCCCCC
Q 011768 343 VAEHTFRPPYYHRNCMSEFMGLIRGGYE-----A--KA---DGFLPGGASLHSCMTPH 390 (478)
Q Consensus 343 ~~e~TfRpPYyHrNv~sE~mg~i~G~y~-----a--r~---~gf~pG~~SLHp~g~pH 390 (478)
..++++++|-+|-| .+|+++++.|.-. . ++ ..+.+|-+..-|.|++|
T Consensus 365 L~pGgm~~PHwHp~-A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H 421 (496)
T 3ksc_A 365 LHKNAMFVPHYNLN-ANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAV 421 (496)
T ss_dssp EETTCEEEEEEESS-CCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred eeCCeEECCeeCCC-CCEEEEEEeceEEEEEEeCCCcEEEEEEecCCeEEEECCCCEE
Confidence 46899999988888 4699999999731 1 11 13689999999999999
No 83
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=93.00 E-value=0.35 Score=51.73 Aligned_cols=77 Identities=19% Similarity=0.329 Sum_probs=51.3
Q ss_pred ceeeeeecCC-cccc-cccEEEEEEeCC-CCCCcceecCCCCEEEEEEeCcEEEEe--ece-e-e--eecCCcEEEEcce
Q 011768 134 GLYTICGAGS-SFLR-HGYAIHMYTANK-SMDNCAFCNADGDFLVVPQKGRLWIAT--ECG-K-L--EVSPGEIAVLPQG 204 (478)
Q Consensus 134 gl~tl~g~gD-~~~~-~G~ai~~y~~~~-sM~~~~f~NaDGD~Li~pq~G~l~l~T--EfG-~-L--~v~pGd~vVIPRG 204 (478)
|..+.+-.-+ |.++ .|+++....... .| ...-.+..+++++++.+|++++.- +.| + + .|++||++|||+|
T Consensus 354 G~v~~~~~~~fP~L~~l~is~a~v~L~PG~~-~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~viP~G 432 (510)
T 3c3v_A 354 GSLKTANELNLLILRWLGLSAEYGNLYRNAL-FVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLVVPQN 432 (510)
T ss_dssp EEEEEECTTTSTTHHHHTCEEEEEEEETTCE-EEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTT
T ss_pred eEEEEeccccCcccccceEEEEEEEecCCce-ecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEEECCC
Confidence 4444444433 4443 255555444333 33 235578889999999999999864 344 2 2 3999999999999
Q ss_pred eEEEEEC
Q 011768 205 FRFAVSL 211 (478)
Q Consensus 205 i~frv~l 211 (478)
+.+.+.-
T Consensus 433 ~~H~~~N 439 (510)
T 3c3v_A 433 FAVAGKS 439 (510)
T ss_dssp CEEEEEE
T ss_pred CeEEEEe
Confidence 9998865
No 84
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=92.93 E-value=0.31 Score=50.51 Aligned_cols=88 Identities=17% Similarity=0.188 Sum_probs=55.9
Q ss_pred ceeeeeecCC-cccc-cccEEEEEEeCC-CCCCcceecCCCCEEEEEEeCcEEEE--eece---------------ee--
Q 011768 134 GLYTICGAGS-SFLR-HGYAIHMYTANK-SMDNCAFCNADGDFLVVPQKGRLWIA--TECG---------------KL-- 191 (478)
Q Consensus 134 gl~tl~g~gD-~~~~-~G~ai~~y~~~~-sM~~~~f~NaDGD~Li~pq~G~l~l~--TEfG---------------~L-- 191 (478)
|..+.+-..+ |.++ .|+++....... .| ..--+|..+.+++++.+|+++++ +.-| .+
T Consensus 231 G~~~~~~~~~~P~L~~l~is~a~~~l~~g~~-~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~ 309 (416)
T 1uij_A 231 GKFFEITPEKNPQLRDLDIFLSSVDINEGAL-LLPHFNSKAIVILVINEGDANIELVGIKEQQQKQKQEEEPLEVQRYRA 309 (416)
T ss_dssp EEEEEECTTTCHHHHHHTEEEEEEEECTTEE-EEEEEESSCEEEEEEEESEEEEEEEEEC------------CCEEEEEE
T ss_pred ceEEEEChHHCccchhcCcceEEEEEcCCcE-ecceEcCCCcEEEEEEeeEEEEEEEcCCCccccccccccccceEEEEE
Confidence 4444443333 4443 244433333222 45 22558899999999999998886 4445 56
Q ss_pred eecCCcEEEEcceeEEEEECCCCCeeEEEEEE
Q 011768 192 EVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEI 223 (478)
Q Consensus 192 ~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~ 223 (478)
++++||++|||+|..+.+.-. ++...+.+.+
T Consensus 310 ~l~~Gdv~vvP~g~~h~~~n~-~~~~~l~f~~ 340 (416)
T 1uij_A 310 ELSEDDVFVIPAAYPFVVNAT-SNLNFLAFGI 340 (416)
T ss_dssp EEETTCEEEECTTCCEEEEES-SSEEEEEEEE
T ss_pred EecCCcEEEECCCCeEEEEcC-CCeEEEEEEc
Confidence 799999999999998877654 4555444443
No 85
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=92.86 E-value=0.061 Score=47.52 Aligned_cols=86 Identities=14% Similarity=-0.001 Sum_probs=52.0
Q ss_pred CCCCccccCCCC----CCCCCCCcccceeeeeecCCcccccccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEee
Q 011768 112 TTPTQLRWKPVD----IPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATE 187 (478)
Q Consensus 112 ~~P~~lrW~p~~----~p~~~~Dfv~gl~tl~g~gD~~~~~G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TE 187 (478)
+..+.+.|.+.+ .+ ++ -++.|.... ....=+++.-+.++..++ .-...|++.+++.+|++.....
T Consensus 12 i~~~~~~W~~~p~~~~~~--Gv----~~~~L~~~~--~~g~~~~~~~~~pG~~~p---~H~H~~~ee~~VL~G~~~~~~g 80 (145)
T 2o1q_A 12 VQMDQVDWKPFPAAFSTG--GI----RWKLLHVSP--EMGSWTAIFDCPAGSSFA---AHVHVGPGEYFLTKGKMDVRGG 80 (145)
T ss_dssp CCGGGSCCEECCGGGEES--CC----EEEEEEEET--TTTEEEEEEEECTTEEEC---CEEESSCEEEEEEEEEEEETTC
T ss_pred EccccCccEeCCcccCCC--Cc----EEEEeeECC--CcccEEEEEEECCCCCCC---ccCCCCCEEEEEEEeEEEEcCC
Confidence 445677888875 32 11 234454333 211113334444444433 1344578889999999996432
Q ss_pred cee--eeecCCcEEEEcceeEEE
Q 011768 188 CGK--LEVSPGEIAVLPQGFRFA 208 (478)
Q Consensus 188 fG~--L~v~pGd~vVIPRGi~fr 208 (478)
--. ..+++||++++|.|..++
T Consensus 81 ~~~~~~~~~~Gd~~~~p~g~~H~ 103 (145)
T 2o1q_A 81 KAAGGDTAIAPGYGYESANARHD 103 (145)
T ss_dssp GGGTSEEEESSEEEEECTTCEES
T ss_pred CEecceEeCCCEEEEECcCCccC
Confidence 112 569999999999999998
No 86
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=92.71 E-value=0.43 Score=50.49 Aligned_cols=47 Identities=15% Similarity=0.184 Sum_probs=37.5
Q ss_pred cCCCCCCCCCCCCCcccccceeeecccc-----c--cc---CCcCCCeeeeecCCCCC
Q 011768 343 VAEHTFRPPYYHRNCMSEFMGLIRGGYE-----A--KA---DGFLPGGASLHSCMTPH 390 (478)
Q Consensus 343 ~~e~TfRpPYyHrNv~sE~mg~i~G~y~-----a--r~---~gf~pG~~SLHp~g~pH 390 (478)
..++++++|.+|-| .+|+++++.|.-. . ++ ..+.+|-+-.-|.+.+|
T Consensus 330 l~pGgm~~PHwHp~-A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GDVfvvP~g~~h 386 (465)
T 3qac_A 330 LYRNAMMAPHYNLN-AHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQLVVVPQNFAI 386 (465)
T ss_dssp ECTTCEEEEEEESS-CCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred ecCCcEeeeEECCC-CCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCeEEEECCCcEE
Confidence 57999999999988 4699999999731 1 11 13679999999999998
No 87
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=92.43 E-value=0.14 Score=42.28 Aligned_cols=58 Identities=14% Similarity=0.092 Sum_probs=43.7
Q ss_pred eecCCCCEEEEEEeCcEEEEeecee---eeecCCcEEEEcceeEEEEEC-CCCCeeEEEEEE
Q 011768 166 FCNADGDFLVVPQKGRLWIATECGK---LEVSPGEIAVLPQGFRFAVSL-PDGPSRGYIAEI 223 (478)
Q Consensus 166 f~NaDGD~Li~pq~G~l~l~TEfG~---L~v~pGd~vVIPRGi~frv~l-~~g~~rgyi~E~ 223 (478)
=+...-.+.+++.+|+++++..-|. ..+.+||.+.||.|+.+|+.= -+.+...+-+|.
T Consensus 33 H~H~~~~e~~~v~~G~~~v~~~d~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~IeVE~ 94 (98)
T 3lag_A 33 HTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEIEL 94 (98)
T ss_dssp EECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEEEEEE
T ss_pred EECCCcEEEEEEeccEEEEEeCCCceEEEEecCCcEEEEcCCCcEECEECCCCeEEEEEEEE
Confidence 3555556788889999999987764 458999999999999999974 344666665554
No 88
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=92.23 E-value=0.46 Score=49.52 Aligned_cols=61 Identities=13% Similarity=0.214 Sum_probs=45.6
Q ss_pred CCCCcceecCCCCEEEEEEeCcEEEE--eece--------------ee--eecCCcEEEEcceeEEEEECCCCCeeEEEE
Q 011768 160 SMDNCAFCNADGDFLVVPQKGRLWIA--TECG--------------KL--EVSPGEIAVLPQGFRFAVSLPDGPSRGYIA 221 (478)
Q Consensus 160 sM~~~~f~NaDGD~Li~pq~G~l~l~--TEfG--------------~L--~v~pGd~vVIPRGi~frv~l~~g~~rgyi~ 221 (478)
.| ..--.|..+.+++++.+|+++++ +.-| .+ +|++||++|||+|..+.+.-. +....+.+
T Consensus 277 ~m-~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~-~~~~~v~f 354 (434)
T 2ea7_A 277 AL-LLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINAT-SNLNFFAF 354 (434)
T ss_dssp EE-EEEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEES-SSEEEEEE
T ss_pred ee-eccEEcCCCCEEEEEEeeEEEEEEEecCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcC-CCeEEEEE
Confidence 45 23558899999999999998886 4444 56 799999999999999877654 44444433
Q ss_pred E
Q 011768 222 E 222 (478)
Q Consensus 222 E 222 (478)
-
T Consensus 355 ~ 355 (434)
T 2ea7_A 355 G 355 (434)
T ss_dssp E
T ss_pred E
Confidence 3
No 89
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=92.14 E-value=0.17 Score=49.89 Aligned_cols=57 Identities=14% Similarity=0.136 Sum_probs=49.8
Q ss_pred ecCCCCEEEEEEeCcEEEEee-ceeeeecCCcEEEEcceeEEEEECCCCCeeEEEEEEc
Q 011768 167 CNADGDFLVVPQKGRLWIATE-CGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 224 (478)
Q Consensus 167 ~NaDGD~Li~pq~G~l~l~TE-fG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~~ 224 (478)
-..++++.+|+.+|++.|+-+ --.-.+++||++.+|.|..+++.= ++++|.++++-.
T Consensus 86 ~~h~~EEfiyVleG~l~l~l~~g~~~~L~~Gds~y~p~~~~H~~~N-~~~Ar~l~V~k~ 143 (266)
T 4e2q_A 86 PPQDIERLIFVVEGAVTLTNTSSSSKKLTVDSYAYLPPNFHHSLDC-VESATLVVFERR 143 (266)
T ss_dssp CCTTEEEEEEEEEECEEEEC--CCCEEECTTEEEEECTTCCCEEEE-SSCEEEEEEEEE
T ss_pred CCCCCeEEEEEEEEEEEEEECCCcEEEEcCCCEEEECCCCCEEEEe-CCCEEEEEEEeE
Confidence 467899999999999999988 667889999999999999999975 578999999854
No 90
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=92.13 E-value=0.27 Score=52.85 Aligned_cols=76 Identities=17% Similarity=0.248 Sum_probs=52.1
Q ss_pred ceeeeeecCC-ccccc-ccEEEEEEeCC-CCCCcceecCCCCEEEEEEeCcEEEE--eecee----eeecCCcEEEEcce
Q 011768 134 GLYTICGAGS-SFLRH-GYAIHMYTANK-SMDNCAFCNADGDFLVVPQKGRLWIA--TECGK----LEVSPGEIAVLPQG 204 (478)
Q Consensus 134 gl~tl~g~gD-~~~~~-G~ai~~y~~~~-sM~~~~f~NaDGD~Li~pq~G~l~l~--TEfG~----L~v~pGd~vVIPRG 204 (478)
|..+.+-.-+ |.++. ||++....... .| ...-.|.+++|++|+.+|++++. ++.|. -.|++||++|||+|
T Consensus 376 G~v~~a~~~~fP~L~~LgiS~a~v~L~pGgm-~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV~v~P~G 454 (531)
T 3fz3_A 376 GRISTLNSHNLPILRFLRLSAERGFFYRNGI-YSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFIVPQN 454 (531)
T ss_dssp EEEEEESTTTCTHHHHHTCEEEEEEECTTCE-EEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTT
T ss_pred eEEEEeccccCCccccCceeEEEEEeecCcc-ccceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeEEEECCC
Confidence 4444444443 44442 66655554443 44 23557889999999999999865 44452 46999999999999
Q ss_pred eEEEEE
Q 011768 205 FRFAVS 210 (478)
Q Consensus 205 i~frv~ 210 (478)
+.+...
T Consensus 455 ~~H~~~ 460 (531)
T 3fz3_A 455 HGVIQQ 460 (531)
T ss_dssp CEEEEE
T ss_pred CeEEEe
Confidence 999665
No 91
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=91.99 E-value=1 Score=46.25 Aligned_cols=89 Identities=9% Similarity=0.065 Sum_probs=64.2
Q ss_pred Cccc-cee-eeeec----CCcccccccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcc
Q 011768 130 DFID-GLY-TICGA----GSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQ 203 (478)
Q Consensus 130 Dfv~-gl~-tl~g~----gD~~~~~G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPR 203 (478)
|-.+ |.. ..-.| +++.-.-|+.+.+-.+... .+.-|+.+. +++++.+|++..+-+--++++++||++|||.
T Consensus 255 ~~~~~g~~~~~y~NP~tg~~~~pti~~~~~~L~pG~~--t~~hRht~s-~Vy~V~eG~G~~~I~~~~~~w~~gD~fvvP~ 331 (368)
T 3nw4_A 255 ATVAPGHAAIRYVNPTTGGDVMPTLRCEFHRLRAGTE--TATRNEVGS-TVFQVFEGAGAVVMNGETTKLEKGDMFVVPS 331 (368)
T ss_dssp CSSBTTEEEEECBCTTTSSBSSSSCEEEEEEECTTCB--CCCEEESSC-EEEEEEESCEEEEETTEEEEECTTCEEEECT
T ss_pred CcccCceEEEEEeCCCCCCCcchhHHhheEEECCCCc--cCCeecccc-EEEEEEeCcEEEEECCEEEEecCCCEEEECC
Confidence 4444 666 45444 2333233666666666654 457777754 9999999999999988899999999999999
Q ss_pred eeEEEEECCCCCeeEEEEE
Q 011768 204 GFRFAVSLPDGPSRGYIAE 222 (478)
Q Consensus 204 Gi~frv~l~~g~~rgyi~E 222 (478)
+..++..- ++++..|.+.
T Consensus 332 w~~h~~~n-~~~a~Lf~~~ 349 (368)
T 3nw4_A 332 WVPWSLQA-ETQFDLFRFS 349 (368)
T ss_dssp TCCEEEEE-SSSEEEEEEE
T ss_pred CCcEEEEe-CCCEEEEEEe
Confidence 99999975 4566666554
No 92
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=91.91 E-value=0.24 Score=51.59 Aligned_cols=45 Identities=22% Similarity=0.333 Sum_probs=35.5
Q ss_pred CCCCEEEEEEeCcEEEEee----ceeeeecCCcEEEEcceeEEEEECCC
Q 011768 169 ADGDFLVVPQKGRLWIATE----CGKLEVSPGEIAVLPQGFRFAVSLPD 213 (478)
Q Consensus 169 aDGD~Li~pq~G~l~l~TE----fG~L~v~pGd~vVIPRGi~frv~l~~ 213 (478)
.|+++|+|+.+|++.+.-. .=.-.+++||+++||+|+.+-+.=.+
T Consensus 62 ~~A~ei~yV~~G~g~~g~V~~~~~~~~~l~~GDv~~~P~G~~h~~~N~g 110 (418)
T 3s7i_A 62 ADADNILVIQQGQATVTVANGNNRKSFNLDEGHALRIPSGFISYILNRH 110 (418)
T ss_dssp ESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECTTCEEEEEECC
T ss_pred CCCCeEEEEEEeeEEEEEEecCCEEEEEecCCCEEEECCCCeEEEEecC
Confidence 5799999999999987642 11457999999999999998664334
No 93
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=91.87 E-value=0.29 Score=51.20 Aligned_cols=53 Identities=21% Similarity=0.293 Sum_probs=41.0
Q ss_pred cCCCCEEEEEEeCcEEEEee--c--eeeeecCCcEEEEcceeEEEEECCC--CCeeEEE
Q 011768 168 NADGDFLVVPQKGRLWIATE--C--GKLEVSPGEIAVLPQGFRFAVSLPD--GPSRGYI 220 (478)
Q Consensus 168 NaDGD~Li~pq~G~l~l~TE--f--G~L~v~pGd~vVIPRGi~frv~l~~--g~~rgyi 220 (478)
..+++|++|+.+|++++.-. - -...+++||+++||+|+.+.+.-.+ .+.+.+.
T Consensus 103 h~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~ 161 (445)
T 2cav_A 103 HSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILK 161 (445)
T ss_dssp EESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECCSSCCEEEEE
T ss_pred CCCCceEEEEEeCEEEEEEEeCCCCEEEEecCCCEEEECCCCcEEEEECCCCCCEEEEE
Confidence 57899999999999988742 1 2567999999999999999886543 3444443
No 94
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=91.87 E-value=0.66 Score=47.95 Aligned_cols=72 Identities=11% Similarity=0.129 Sum_probs=49.6
Q ss_pred cccEEEEEEeCC-CCCCcceecCCCCEEEEEEeCcEEEEee--------ce----eeeecCCcEEEEcceeEEEEECCCC
Q 011768 148 HGYAIHMYTANK-SMDNCAFCNADGDFLVVPQKGRLWIATE--------CG----KLEVSPGEIAVLPQGFRFAVSLPDG 214 (478)
Q Consensus 148 ~G~ai~~y~~~~-sM~~~~f~NaDGD~Li~pq~G~l~l~TE--------fG----~L~v~pGd~vVIPRGi~frv~l~~g 214 (478)
.|+++....... .| ..--.|..+++++++.+|+++++=. -| .-+|++||++|||+|..+.+.-. +
T Consensus 237 l~is~a~v~l~pG~~-~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~GDV~vvP~G~~h~~~n~-~ 314 (397)
T 2phl_A 237 LNVLISSIEMEEGAL-FVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKDDVFVIPAAYPVAIKAT-S 314 (397)
T ss_dssp TTEEEEEEEECTTEE-EEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETTCEEEECTTCCEEEEES-S
T ss_pred CCeeEEEEEEcCCcE-eeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecCCCEEEECCCCeEEEEeC-C
Confidence 445444433332 34 2355889999999999999888743 34 46799999999999998877653 3
Q ss_pred CeeEEEE
Q 011768 215 PSRGYIA 221 (478)
Q Consensus 215 ~~rgyi~ 221 (478)
....+.+
T Consensus 315 ~l~~l~f 321 (397)
T 2phl_A 315 NVNFTGF 321 (397)
T ss_dssp SEEEEEE
T ss_pred CeEEEEE
Confidence 4444333
No 95
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=91.85 E-value=0.46 Score=50.47 Aligned_cols=87 Identities=15% Similarity=0.199 Sum_probs=55.9
Q ss_pred ceeeeeecCCcccc-cccEEEEEEeCCC-CCCcceecCCCCEEEEEEeCcEEEEeec--------------------e--
Q 011768 134 GLYTICGAGSSFLR-HGYAIHMYTANKS-MDNCAFCNADGDFLVVPQKGRLWIATEC--------------------G-- 189 (478)
Q Consensus 134 gl~tl~g~gD~~~~-~G~ai~~y~~~~s-M~~~~f~NaDGD~Li~pq~G~l~l~TEf--------------------G-- 189 (478)
|+.-+.-..++.++ .|+++........ |--..|-| .++|+|+.+|++.+...+ .
T Consensus 28 G~~e~~~~~~~~l~~~gv~~~r~~i~pggl~~Ph~~~--~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~~ 105 (493)
T 2d5f_A 28 GLIETWNSQHPELQCAGVTVSKRTLNRNGLHLPSYSP--YPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQ 105 (493)
T ss_dssp EEEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEECS--SCEEEEEEECEEEEEECCTTCCCCEEECC------------
T ss_pred cEEEEeCCCChhhccCCEEEEEEEeCCCcEeCceecC--CCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccc
Confidence 55555444444443 4666666555532 21123444 579999999999997653 1
Q ss_pred --------eeeecCCcEEEEcceeEEEEECCC-CCeeEEEEE
Q 011768 190 --------KLEVSPGEIAVLPQGFRFAVSLPD-GPSRGYIAE 222 (478)
Q Consensus 190 --------~L~v~pGd~vVIPRGi~frv~l~~-g~~rgyi~E 222 (478)
...|++||+++||.|+.+.+.-.+ .+.+.+.+-
T Consensus 106 ~~~d~~qkv~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~ 147 (493)
T 2d5f_A 106 QLQDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLL 147 (493)
T ss_dssp -CSEEESCEEEEETTEEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred ccccccceEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEe
Confidence 457999999999999999876433 355555443
No 96
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=91.83 E-value=0.37 Score=50.94 Aligned_cols=49 Identities=10% Similarity=0.107 Sum_probs=37.7
Q ss_pred cCCCCCCCCCCCCCcccccceeeeccccccc----------CCcCCCeeeeecCCCCCCC
Q 011768 343 VAEHTFRPPYYHRNCMSEFMGLIRGGYEAKA----------DGFLPGGASLHSCMTPHGP 392 (478)
Q Consensus 343 ~~e~TfRpPYyHrNv~sE~mg~i~G~y~ar~----------~gf~pG~~SLHp~g~pHGP 392 (478)
..++++++|-+|.|. +|+++.+.|.....- ..+.+|-+-+-|.|++|.-
T Consensus 345 l~pGa~~~pH~Hp~a-~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~~H~~ 403 (476)
T 1fxz_A 345 LRKNAMFVPHYNLNA-NSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAA 403 (476)
T ss_dssp ECTTCEEEEEEETTC-CEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEE
T ss_pred ecCCceecceECCCC-CEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCCeEEE
Confidence 457888899777665 799999999854311 1288999999999999953
No 97
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=91.83 E-value=0.65 Score=49.49 Aligned_cols=88 Identities=15% Similarity=0.180 Sum_probs=55.7
Q ss_pred ceeeeeecC-Cccccc-ccEEEEEEeC-CCCCCcceecCCCCEEEEEEeCcEEEEee--cee--ee--ecCCcEEEEcce
Q 011768 134 GLYTICGAG-SSFLRH-GYAIHMYTAN-KSMDNCAFCNADGDFLVVPQKGRLWIATE--CGK--LE--VSPGEIAVLPQG 204 (478)
Q Consensus 134 gl~tl~g~g-D~~~~~-G~ai~~y~~~-~sM~~~~f~NaDGD~Li~pq~G~l~l~TE--fG~--L~--v~pGd~vVIPRG 204 (478)
|..+.+-.. =|.+++ ||++...... ..| ..--.|..+++++|+.+|++++.-. .|. +. +++||+.|||+|
T Consensus 340 G~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm-~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G 418 (496)
T 3ksc_A 340 GRIKTVTSLDLPVLRWLKLSAEHGSLHKNAM-FVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQN 418 (496)
T ss_dssp EEEEEECTTTSTTHHHHTCEEEEEEEETTCE-EEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTT
T ss_pred eeEEEeCHHHCccccccceeEEEEEeeCCeE-ECCeeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecCCeEEEECCC
Confidence 444444433 355553 5555433333 356 2355888999999999999998643 343 23 899999999999
Q ss_pred eEEEEECCCCCeeEEEEEEc
Q 011768 205 FRFAVSLPDGPSRGYIAEIF 224 (478)
Q Consensus 205 i~frv~l~~g~~rgyi~E~~ 224 (478)
..+-..-.+.. .-++..+
T Consensus 419 ~~H~~~a~~e~--~~~l~f~ 436 (496)
T 3ksc_A 419 YAVAAKSLSDR--FSYVAFK 436 (496)
T ss_dssp CEEEEEECSSE--EEEEEEE
T ss_pred CEEEEEeCCCC--EEEEEEE
Confidence 99865433323 3344454
No 98
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=91.79 E-value=0.27 Score=51.77 Aligned_cols=47 Identities=15% Similarity=0.114 Sum_probs=37.4
Q ss_pred cCCCCCCCCCCCCCcccccceeeeccccc--------cc--CCcCCCeeeeecCCCCC
Q 011768 343 VAEHTFRPPYYHRNCMSEFMGLIRGGYEA--------KA--DGFLPGGASLHSCMTPH 390 (478)
Q Consensus 343 ~~e~TfRpPYyHrNv~sE~mg~i~G~y~a--------r~--~gf~pG~~SLHp~g~pH 390 (478)
..++++++|-+|.|. +|+++++.|.-.. +. ..+.+|-+-.-|.|++|
T Consensus 329 l~pG~~~~pH~Hp~A-~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv~v~P~G~~H 385 (459)
T 2e9q_A 329 LYSNAMVAPHYTVNS-HSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMIPQNFVV 385 (459)
T ss_dssp ECTTCEEEEEEESSC-CEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred eeCCcCccceECCCC-CEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcEEEECCCCEE
Confidence 468999999888887 7999999996311 11 13789999999999999
No 99
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=90.84 E-value=0.62 Score=46.95 Aligned_cols=56 Identities=13% Similarity=0.044 Sum_probs=43.8
Q ss_pred CcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECCCCCeeEEE
Q 011768 163 NCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYI 220 (478)
Q Consensus 163 ~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi 220 (478)
.+.-+..+. +++++.+|+++++-+-=..++++||+++||.++.+++.- +++++.+.
T Consensus 281 ~~~H~h~~~-ev~~v~~G~g~~~v~~~~~~~~~GD~~~vP~~~~H~~~n-~e~~~l~~ 336 (354)
T 2d40_A 281 SRVARTTDS-TIYHVVEGSGQVIIGNETFSFSAKDIFVVPTWHGVSFQT-TQDSVLFS 336 (354)
T ss_dssp CCCBEESSC-EEEEEEEEEEEEEETTEEEEEETTCEEEECTTCCEEEEE-EEEEEEEE
T ss_pred CCceecCCc-EEEEEEeCeEEEEECCEEEEEcCCCEEEECCCCeEEEEe-CCCEEEEE
Confidence 335566655 999999999999987778899999999999999998865 33444333
No 100
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=90.57 E-value=0.84 Score=48.05 Aligned_cols=78 Identities=14% Similarity=0.237 Sum_probs=53.0
Q ss_pred cceeeeeecCC-cccc-cccEEEEEEeCC-CCCCcceecCCCCEEEEEEeCcEEEEeec--e-e-ee--ecCCcEEEEcc
Q 011768 133 DGLYTICGAGS-SFLR-HGYAIHMYTANK-SMDNCAFCNADGDFLVVPQKGRLWIATEC--G-K-LE--VSPGEIAVLPQ 203 (478)
Q Consensus 133 ~gl~tl~g~gD-~~~~-~G~ai~~y~~~~-sM~~~~f~NaDGD~Li~pq~G~l~l~TEf--G-~-L~--v~pGd~vVIPR 203 (478)
-|..+.+-..+ |.++ .|+++....... .| ..--.|..++|++++.+|++++.=.- | + +. |++||++|||+
T Consensus 303 gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~-~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv~v~P~ 381 (459)
T 2e9q_A 303 GGRISTANYHTLPILRQVRLSAERGVLYSNAM-VAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMIPQ 381 (459)
T ss_dssp TEEEEEECTTTSTTHHHHTCEEEEEEECTTCE-EEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECT
T ss_pred CeeEEEeccccCccccccccceEEEEeeCCcC-ccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcEEEECC
Confidence 45555554444 4443 255555444433 44 33568889999999999999887433 2 2 33 99999999999
Q ss_pred eeEEEEEC
Q 011768 204 GFRFAVSL 211 (478)
Q Consensus 204 Gi~frv~l 211 (478)
|..+.+.-
T Consensus 382 G~~H~~~n 389 (459)
T 2e9q_A 382 NFVVIKRA 389 (459)
T ss_dssp TCEEEEEE
T ss_pred CCEEEEEe
Confidence 99998764
No 101
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=90.42 E-value=1.1 Score=47.49 Aligned_cols=90 Identities=18% Similarity=0.234 Sum_probs=56.5
Q ss_pred ceeeeeecCC-cccc-cccEEEEEEeC-CCCCCcceecCCCCEEEEEEeCcEEEEe--ecee--ee--ecCCcEEEEcce
Q 011768 134 GLYTICGAGS-SFLR-HGYAIHMYTAN-KSMDNCAFCNADGDFLVVPQKGRLWIAT--ECGK--LE--VSPGEIAVLPQG 204 (478)
Q Consensus 134 gl~tl~g~gD-~~~~-~G~ai~~y~~~-~sM~~~~f~NaDGD~Li~pq~G~l~l~T--EfG~--L~--v~pGd~vVIPRG 204 (478)
|..+.+-.-+ |.++ -||++...... ..| ..--.|..+++++|+.+|++++.- ..|. +. |++||+.|||+|
T Consensus 305 G~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm-~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G 383 (466)
T 3kgl_A 305 GYISTLNSYDLPILRFLRLSALRGSIRQNAM-VLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQG 383 (466)
T ss_dssp EEEEEECTTTCTTHHHHTCEEEEEEEETTEE-EEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTT
T ss_pred ceEEEechhhCcccccCceeeEEEEeecCcE-eeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEEEECCC
Confidence 4444444443 3333 24444433322 255 235578899999999999998763 3453 33 899999999999
Q ss_pred eEEEEECCCCCeeEEEEEEcCC
Q 011768 205 FRFAVSLPDGPSRGYIAEIFGT 226 (478)
Q Consensus 205 i~frv~l~~g~~rgyi~E~~~~ 226 (478)
.-+.+...+.+ ..+++++.+
T Consensus 384 ~~H~~~ag~e~--~~~l~~f~s 403 (466)
T 3kgl_A 384 FSVVKRATSEQ--FRWIEFKTN 403 (466)
T ss_dssp CEEEEEECSSE--EEEEEEESS
T ss_pred CeEEEEcCCCC--EEEEEEECC
Confidence 99987643323 444555544
No 102
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=90.20 E-value=0.76 Score=48.63 Aligned_cols=89 Identities=19% Similarity=0.211 Sum_probs=56.7
Q ss_pred ceeeeeecC-Cccccc-ccEEEEEEeCC-CCCCcceecCCCCEEEEEEeCcEEEE--eecee--ee--ecCCcEEEEcce
Q 011768 134 GLYTICGAG-SSFLRH-GYAIHMYTANK-SMDNCAFCNADGDFLVVPQKGRLWIA--TECGK--LE--VSPGEIAVLPQG 204 (478)
Q Consensus 134 gl~tl~g~g-D~~~~~-G~ai~~y~~~~-sM~~~~f~NaDGD~Li~pq~G~l~l~--TEfG~--L~--v~pGd~vVIPRG 204 (478)
|..+.+-.- =|.+++ ||++....... .| ..--.|..+++++|+.+|++++. +..|. +. +++||+.|||+|
T Consensus 305 G~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm-~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GDVfvvP~g 383 (465)
T 3qac_A 305 GRLTTVNSFNLPILRHLRLSAAKGVLYRNAM-MAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQLVVVPQN 383 (465)
T ss_dssp EEEEEECTTTSTTHHHHTCEEEEEEECTTCE-EEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTT
T ss_pred ceEEEeCHHHCCCccccceeEEEEEecCCcE-eeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCeEEEECCC
Confidence 444444333 355653 66655443332 56 22458889999999999999875 33343 33 899999999999
Q ss_pred eEEEEECCCCCeeEEEEEEcC
Q 011768 205 FRFAVSLPDGPSRGYIAEIFG 225 (478)
Q Consensus 205 i~frv~l~~g~~rgyi~E~~~ 225 (478)
.-+-... +....-+++.+.
T Consensus 384 ~~h~~~a--g~e~~~~l~f~~ 402 (465)
T 3qac_A 384 FAIVKQA--FEDGFEWVSFKT 402 (465)
T ss_dssp CEEEEEE--EEEEEEEEEEES
T ss_pred cEEEEEc--CCCCeEEEEEec
Confidence 9987653 222344455543
No 103
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=90.00 E-value=0.7 Score=42.17 Aligned_cols=88 Identities=11% Similarity=0.089 Sum_probs=56.2
Q ss_pred CCCCccccCCCCCCCCCCCcccce--eeeeecCCcccccc--cEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEee
Q 011768 112 TTPTQLRWKPVDIPDSPTDFIDGL--YTICGAGSSFLRHG--YAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATE 187 (478)
Q Consensus 112 ~~P~~lrW~p~~~p~~~~Dfv~gl--~tl~g~gD~~~~~G--~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TE 187 (478)
+..+.+.|.+.+- ...|+ +.|..+.+ .| +.+--|.++..++ --...|.+.+++.+|++... +
T Consensus 13 v~~~~~~W~~~~~------~~~GV~~~~L~~~~~----~g~~v~lvr~~pG~~~p---~H~H~g~ee~~VL~G~f~~~-~ 78 (165)
T 3cjx_A 13 VDTTAHPFLKALG------GHEGTDIFPLFMDPY----NGLMVMRASFAPGLTLP---LHFHTGTVHMYTISGCWYYT-E 78 (165)
T ss_dssp EETTSSCCBCSGG------GCTTEEEEEEEEETT----TTEEEEEEEECTTCBCC---EEEESSCEEEEEEESEEEET-T
T ss_pred EccccCCcEECCC------CCCCEEEEEeEeCCC----CCcEEEEEEECCCCcCC---cccCCCCEEEEEEEEEEEEC-C
Confidence 3456677877531 11244 54543322 13 3334444555543 24456899999999999884 3
Q ss_pred ceeeeecCCcEEEEcceeEEEEECCC
Q 011768 188 CGKLEVSPGEIAVLPQGFRFAVSLPD 213 (478)
Q Consensus 188 fG~L~v~pGd~vVIPRGi~frv~l~~ 213 (478)
-|...+++||++.+|.|..+.....+
T Consensus 79 ~~~~~~~aGd~~~~P~g~~H~~~a~~ 104 (165)
T 3cjx_A 79 YPGQKQTAGCYLYEPGGSIHQFNTPR 104 (165)
T ss_dssp CTTSCEETTEEEEECTTCEECEECCT
T ss_pred CceEEECCCeEEEeCCCCceeeEeCC
Confidence 34678899999999999999987754
No 104
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=89.90 E-value=0.7 Score=49.41 Aligned_cols=49 Identities=12% Similarity=0.167 Sum_probs=37.7
Q ss_pred cCCCCCCCCCCCCCcccccceeeeccccccc----------CCcCCCeeeeecCCCCCCC
Q 011768 343 VAEHTFRPPYYHRNCMSEFMGLIRGGYEAKA----------DGFLPGGASLHSCMTPHGP 392 (478)
Q Consensus 343 ~~e~TfRpPYyHrNv~sE~mg~i~G~y~ar~----------~gf~pG~~SLHp~g~pHGP 392 (478)
..++++++|-+|.|. +|+++.+.|.....- ..+.+|-+-+-|.|++|.-
T Consensus 379 L~PG~~~~pH~Hp~a-~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~viP~G~~H~~ 437 (510)
T 3c3v_A 379 LYRNALFVPHYNTNA-HSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLVVPQNFAVAG 437 (510)
T ss_dssp EETTCEEEEEEESSC-CEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEE
T ss_pred ecCCceecceECCCC-CEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEEECCCCeEEE
Confidence 457888999777665 799999999854311 1288999999999999953
No 105
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=89.59 E-value=0.44 Score=45.41 Aligned_cols=93 Identities=13% Similarity=0.171 Sum_probs=59.3
Q ss_pred CCCCCccccCCCCCCCCCCCcccceeeeeecCCcccccccEEEE--EEeCCCCCCcceecCCCCEEEEEEeCcEEEEeec
Q 011768 111 YTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHM--YTANKSMDNCAFCNADGDFLVVPQKGRLWIATEC 188 (478)
Q Consensus 111 ~~~P~~lrW~p~~~p~~~~Dfv~gl~tl~g~gD~~~~~G~ai~~--y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEf 188 (478)
.++++.+.|.+.+.+ +. -++.|...++- .|..+.+ +.++..++. -...|.+.+++.+|++.-
T Consensus 13 ~i~~~~~~W~~~~~~--Gv----~~~~L~~~~~e---~g~~~~lvr~~pG~~~p~---H~H~g~Ee~~VL~G~f~d---- 76 (223)
T 3o14_A 13 VIDTDQLEWRPSPMK--GV----ERRMLDRIGGE---VARATSIVRYAPGSRFSA---HTHDGGEEFIVLDGVFQD---- 76 (223)
T ss_dssp EEEGGGSCCEECSST--TE----EEEEEEEESSS---SCEEEEEEEECTTEECCC---EECTTCEEEEEEEEEEEE----
T ss_pred EeeCccCCceeCCCC--CE----EEEEeecCCCc---cccEEEEEEECCCCCccc---ccCCCCEEEEEEEeEEEE----
Confidence 456788889987653 21 24455444431 2333333 444544432 456789999999999863
Q ss_pred eeeeecCCcEEEEcceeEEEEECCCCCeeEEE
Q 011768 189 GKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYI 220 (478)
Q Consensus 189 G~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi 220 (478)
+.-.+.+|||+++|.|+.++....+ .+..|+
T Consensus 77 ~~~~~~~Gd~~~~P~g~~H~p~a~~-gc~~~v 107 (223)
T 3o14_A 77 EHGDYPAGTYVRNPPTTSHVPGSAE-GCTIFV 107 (223)
T ss_dssp TTEEEETTEEEEECTTCEECCEESS-CEEEEE
T ss_pred CCeEECCCeEEEeCCCCccccEeCC-CCEEEE
Confidence 3448999999999999999876533 344443
No 106
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=89.44 E-value=1.8 Score=44.68 Aligned_cols=66 Identities=14% Similarity=0.041 Sum_probs=46.9
Q ss_pred ccccccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEE-EeeceeeeecCCcEEEEcceeEEEEEC
Q 011768 145 FLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWI-ATECGKLEVSPGEIAVLPQGFRFAVSL 211 (478)
Q Consensus 145 ~~~~G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l-~TEfG~L~v~pGd~vVIPRGi~frv~l 211 (478)
.+-..+.+++.....--....=++.. ++++|+.+|++.+ ..+-.++.+++||+++||.|..+.+.-
T Consensus 118 ~~t~~L~a~~~~l~PG~~~~~HrH~~-~ev~~IleG~G~~t~v~G~~~~~~~GD~i~~P~g~~H~~~N 184 (394)
T 3bu7_A 118 AACGWLFSGIQTMKAGERAGAHRHAA-SALRFIMEGSGAYTIVDGHKVELGANDFVLTPNGTWHEHGI 184 (394)
T ss_dssp CSBTTBEEEEEEECTTCBCCCEEESS-CEEEEEEECSCEEEEETTEEEEECTTCEEEECTTCCEEEEE
T ss_pred ccCCeeEEEEEEECCCCCcCCccCCc-ceEEEEEEeeEEEEEECCEEEEEcCCCEEEECcCCCEEEEc
Confidence 34556655555544322222446655 4899999999977 555557889999999999999999865
No 107
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=89.20 E-value=3 Score=39.47 Aligned_cols=78 Identities=9% Similarity=-0.046 Sum_probs=59.2
Q ss_pred ccccEEEEEEe--CCCCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEEC-CCCCeeEEEEEE
Q 011768 147 RHGYAIHMYTA--NKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSL-PDGPSRGYIAEI 223 (478)
Q Consensus 147 ~~G~ai~~y~~--~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l-~~g~~rgyi~E~ 223 (478)
...+.+.+... ..+.. +.....+++.+++++|++.+.-.--...+++||++.++.+..+++.- .++++|-+++--
T Consensus 162 ~~~~~~~~~tl~PG~~~~--~~~~h~~ee~~~vLeG~~~~~~~~~~~~l~~GD~~~~~~~~pH~~~n~g~~~~~yl~~kd 239 (246)
T 1sfn_A 162 AFDFMVSTMSFAPGASLP--YAEVHYMEHGLLMLEGEGLYKLEENYYPVTAGDIIWMGAHCPQWYGALGRNWSKYLLYKD 239 (246)
T ss_dssp TCSEEEEEEEECTTCBCS--SCBCCSSCEEEEEEECEEEEEETTEEEEEETTCEEEECTTCCEEEEEESSSCEEEEEEEE
T ss_pred CCCeEEEEEEECCCCccC--cccCCCceEEEEEEECEEEEEECCEEEEcCCCCEEEECCCCCEEEEcCCCCCEEEEEEEe
Confidence 34566665554 33433 33557899999999999999988888999999999999999999864 455888877655
Q ss_pred cCC
Q 011768 224 FGT 226 (478)
Q Consensus 224 ~~~ 226 (478)
.+.
T Consensus 240 ~~r 242 (246)
T 1sfn_A 240 MNR 242 (246)
T ss_dssp CSS
T ss_pred ccc
Confidence 444
No 108
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=88.94 E-value=1.1 Score=46.06 Aligned_cols=71 Identities=8% Similarity=-0.047 Sum_probs=50.7
Q ss_pred ccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEE-EEeeceeeeecCCcEEEEcceeEEEEECC-CCCeeEEE
Q 011768 149 GYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLW-IATECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYI 220 (478)
Q Consensus 149 G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~-l~TEfG~L~v~pGd~vVIPRGi~frv~l~-~g~~rgyi 220 (478)
.+.+.+.....--....=++. .++++|+.+|++. +..+--++.+++||+++||.|..+++.-. +.+...+.
T Consensus 102 ~L~a~~~~l~PG~~~~~HrH~-~~ev~~VleG~G~~~~vdG~~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l~ 174 (368)
T 3nw4_A 102 TMWAAIQYLGPRETAPEHRHS-QNAFRFVVEGEGVWTVVNGDPVRMSRGDLLLTPGWCFHGHMNDTDQPMAWID 174 (368)
T ss_dssp SCEEEEEEECTTCEEEEEEES-SCEEEECSSCEEEEEEETTEEEEEETTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred ceEEEEEEECCCCccCceecc-cceEEEEEecceEEEEECCEEEEEeCCCEEEECCCCcEEeEeCCCCCeEEEE
Confidence 444454444433323345665 5799999999996 77788889999999999999999999753 33545443
No 109
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=88.81 E-value=0.55 Score=48.56 Aligned_cols=45 Identities=22% Similarity=0.313 Sum_probs=36.2
Q ss_pred CCCCEEEEEEeCcEEEEee----ceeeeecCCcE------EEEcceeEEEEECCC
Q 011768 169 ADGDFLVVPQKGRLWIATE----CGKLEVSPGEI------AVLPQGFRFAVSLPD 213 (478)
Q Consensus 169 aDGD~Li~pq~G~l~l~TE----fG~L~v~pGd~------vVIPRGi~frv~l~~ 213 (478)
.+.++++|+.+|++++.-. --.-.|++||+ ++||+|+.+.+.-.+
T Consensus 70 ~~a~ei~yVl~G~~~v~~v~~~~~~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g 124 (397)
T 2phl_A 70 ADAELLLVVRSGSAILVLVKPDDRREYFFLTSDNPIFSDHQKIPAGTIFYLVNPD 124 (397)
T ss_dssp ESEEEEEEEEESEEEEEEEETTTEEEEEEEESSCTTSCSEEEECTTCEEEEEECC
T ss_pred cCCCeEEEEEeeeEEEEEEeCCCcEEEEECCCCcccccceEEECCCCcEEEEeCC
Confidence 4778999999999998841 11567999999 999999999885434
No 110
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=87.93 E-value=1.3 Score=44.34 Aligned_cols=69 Identities=13% Similarity=0.123 Sum_probs=53.8
Q ss_pred cEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECCCCCeeEEEEEE
Q 011768 150 YAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEI 223 (478)
Q Consensus 150 ~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~ 223 (478)
..|.+|...++ --.+.+.|.+|..++|+..|+..-....+.+||.+.||.|+.|.+...+ .+.++-++.
T Consensus 209 teV~l~G~Ges----~~~~~~~d~wiWqLEGss~Vt~~~q~~~L~~~DsLLIpa~~~y~~~r~~-gsv~L~I~~ 277 (286)
T 2qnk_A 209 TQVIAYGQGSS----EGLRQNVDVWLWQLEGSSVVTMGGRRLSLAPDDSLLVLAGTSYAWERTQ-GSVALSVTQ 277 (286)
T ss_dssp EEEEEECSEEE----EECCCSSCEEEEEEESCEEEEETTEEEEECTTEEEEECTTCCEEEEECT-TCEEEEEEE
T ss_pred eEEEEEcCCcc----ccccCcCcEEEEEEcCceEEEECCeEEeccCCCEEEecCCCeEEEEecC-CeEEEEEEE
Confidence 44566655543 3355566999999999999999999999999999999999999998744 345555543
No 111
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=87.92 E-value=1 Score=46.85 Aligned_cols=74 Identities=12% Similarity=0.182 Sum_probs=49.9
Q ss_pred ecCC-ccccc-ccEEEEEEeCC-CCCCcceecCCCCEEEEEEeCcEEEEee--ce-------------------------
Q 011768 140 GAGS-SFLRH-GYAIHMYTANK-SMDNCAFCNADGDFLVVPQKGRLWIATE--CG------------------------- 189 (478)
Q Consensus 140 g~gD-~~~~~-G~ai~~y~~~~-sM~~~~f~NaDGD~Li~pq~G~l~l~TE--fG------------------------- 189 (478)
...- |.++. |+++....... .| ..--+|..+.+++|+.+|++++.-. -|
T Consensus 251 ~~~~~p~L~~~gis~~r~~l~pgg~-~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (418)
T 3s7i_A 251 PDKKNPQLQDLDMMLTCVEIKEGAL-MLPHFNSKAMVIVVVNKGTGNLELVAVRKEQQQRGRREEEEDEDEEEEGSNREV 329 (418)
T ss_dssp SBTTBHHHHHHTCEEEEEEECTTEE-EEEEEESSCEEEEEEEECCEEEEEEEEEEC-------------------CCEEE
T ss_pred hHHcchhhccCCeeEEEEEecCCce-eCceecCCCCEEEEEEeCeEEEEEEeCCCccccccccccccccccccccccccc
Confidence 3344 56653 66665544433 45 2244777889999999999987633 23
Q ss_pred ---eeeecCCcEEEEcceeEEEEECCCCC
Q 011768 190 ---KLEVSPGEIAVLPQGFRFAVSLPDGP 215 (478)
Q Consensus 190 ---~L~v~pGd~vVIPRGi~frv~l~~g~ 215 (478)
.-++++||++|||+|..+-+.- +++
T Consensus 330 ~~~~~~l~~GDV~vvP~G~~~~~~~-~~~ 357 (418)
T 3s7i_A 330 RRYTARLKEGDVFIMPAAHPVAINA-SSE 357 (418)
T ss_dssp EEEEEEECTTCEEEECTTCCEEEEE-SSC
T ss_pred eEEEeeeCCCCEEEECCCCEEEEEC-CCC
Confidence 2348999999999999887653 444
No 112
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=87.25 E-value=0.91 Score=42.01 Aligned_cols=54 Identities=13% Similarity=0.199 Sum_probs=40.5
Q ss_pred EEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEEC
Q 011768 151 AIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSL 211 (478)
Q Consensus 151 ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l 211 (478)
.+--+.++..++. -...|.|++++.+|++. -|-| .+.+||++++|.|..++...
T Consensus 128 ~l~~~~pG~~~p~---H~H~g~E~~~VL~G~f~--de~~--~~~~Gd~~~~p~g~~H~p~a 181 (195)
T 2q1z_B 128 RLLWIPGGQAVPD---HGHRGLELTLVLQGAFR--DETD--RFGAGDIEIADQELEHTPVA 181 (195)
T ss_dssp EEEEECTTCBCCC---CCCSSCEEEEEEESEEE--CSSS--EEETTCEEEECSSCCCCCEE
T ss_pred EEEEECCCCCCCC---cCCCCeEEEEEEEEEEE--CCcE--EECCCeEEEeCcCCccCCEe
Confidence 3444555655532 44589999999999865 3444 69999999999999998765
No 113
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=83.65 E-value=1.7 Score=43.29 Aligned_cols=70 Identities=16% Similarity=0.176 Sum_probs=51.8
Q ss_pred CCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeE-EEEECCC--CCeeEEEEEEcCCeeeeC
Q 011768 160 SMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFR-FAVSLPD--GPSRGYIAEIFGTHFQLP 231 (478)
Q Consensus 160 sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~-frv~l~~--g~~rgyi~E~~~~~~~LP 231 (478)
.+...+|. .+=|.+||+..|.+.|+++--.-++.+-|-+.||+|.+ ..+.-.| .+++.|||-+. +|=.+|
T Consensus 69 ~~~~~yfl-~~rE~~iV~l~G~~~V~vdG~~f~lg~~dalYVp~g~~~v~~as~da~~~a~fav~sAP-a~~~~P 141 (282)
T 1xru_A 69 QLGVSYFL-ERRELGVINIGGAGTITVDGQCYEIGHRDALYVGKGAKEVVFASIDTGTPAKFYYNCAP-AHTTYP 141 (282)
T ss_dssp HTTSSSTT-TTEEEEEEECSSCEEEEETTEEEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEEEEE-CSSCCC
T ss_pred hhCCcccc-CCcEEEEEEccCeEEEEECCEEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEEccc-cCCCCC
Confidence 44333333 66678889999999999876556778899999999998 4554433 37999999998 555555
No 114
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=83.12 E-value=2.1 Score=44.77 Aligned_cols=79 Identities=20% Similarity=0.262 Sum_probs=51.5
Q ss_pred cceeeeeecCC-cccc-cccEEEEEEeCC-CCCCcceecCCCCEEEEEEeCcEEEE--eece--------------eeee
Q 011768 133 DGLYTICGAGS-SFLR-HGYAIHMYTANK-SMDNCAFCNADGDFLVVPQKGRLWIA--TECG--------------KLEV 193 (478)
Q Consensus 133 ~gl~tl~g~gD-~~~~-~G~ai~~y~~~~-sM~~~~f~NaDGD~Li~pq~G~l~l~--TEfG--------------~L~v 193 (478)
-|..+.+-..+ |.++ .|+++....... .| ..--.|..+++++++.+|+++++ +..| .-++
T Consensus 262 ~G~v~~~~~~~fP~L~~l~is~~~v~l~pg~m-~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~~~~~g~~~~~~~~~l 340 (445)
T 2cav_A 262 YGKLYEITPEKNSQLRDLDILLNCLQMNEGAL-FVPHYNSRATVILVANEGRAEVELVGLEQQQQQGLESMQLRRYAATL 340 (445)
T ss_dssp SEEEEEECTTTCHHHHHHTEEEEEEEECTTEE-EEEEEESSCEEEEEEEESCEEEEEEEC-----------CCEEEEEEE
T ss_pred CceEEEeChHHCcccccCCCceEEEEeeCCce-eeeEECCCCcEEEEEEeeEEEEEEEeCCCcccccccCcceEEEEeEe
Confidence 35555554433 4454 255555444433 45 22558899999999999999887 3333 2238
Q ss_pred cCCcEEEEcceeEEEEECC
Q 011768 194 SPGEIAVLPQGFRFAVSLP 212 (478)
Q Consensus 194 ~pGd~vVIPRGi~frv~l~ 212 (478)
++||+.|||+|.-+-+.-.
T Consensus 341 ~~GdV~vvP~g~~h~~~n~ 359 (445)
T 2cav_A 341 SEGDIIVIPSSFPVALKAA 359 (445)
T ss_dssp CTTCEEEECTTCCEEEEES
T ss_pred cCCcEEEEcCCcEEEEEcC
Confidence 9999999999988866543
No 115
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=82.71 E-value=1.4 Score=44.11 Aligned_cols=62 Identities=16% Similarity=0.225 Sum_probs=48.3
Q ss_pred CCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeE-EEEECCC--CCeeEEEEEEcCCeeeeC
Q 011768 169 ADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFR-FAVSLPD--GPSRGYIAEIFGTHFQLP 231 (478)
Q Consensus 169 aDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~-frv~l~~--g~~rgyi~E~~~~~~~LP 231 (478)
.+=|.+||+..|.+.|+++--.-++.+-|-|.||+|.+ ..+.-.| .+++.|||-+. +|=.+|
T Consensus 77 ~~rE~~iV~lgG~~~V~vdg~~f~lg~~dalYVp~G~~~v~~as~d~~~~a~fav~sAP-a~~~~P 141 (289)
T 1ywk_A 77 ERRELGVINIGGPGFIEIDGAKETMKKQDGYYIGKETKHVRFSSENPDNPAKFYISCVP-AHHKYP 141 (289)
T ss_dssp TTEEEEEEECSSCEEEEETTEEEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEEEEE-CSSCCC
T ss_pred CCcEEEEEEccCeEEEEECCEEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEEccc-cCCCCC
Confidence 56677889999999999875555777899999999988 4554333 37999999998 555555
No 116
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=81.98 E-value=5.6 Score=39.33 Aligned_cols=64 Identities=13% Similarity=0.035 Sum_probs=46.6
Q ss_pred eecCCCCEEEEEEeCcEEEEeeceee---eec-------CCcEEEEcceeEEEEECCCCCeeEEEEEEcCCeeeeC
Q 011768 166 FCNADGDFLVVPQKGRLWIATECGKL---EVS-------PGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLP 231 (478)
Q Consensus 166 f~NaDGD~Li~pq~G~l~l~TEfG~L---~v~-------pGd~vVIPRGi~frv~l~~g~~rgyi~E~~~~~~~LP 231 (478)
+.-.+=|.+||+..|.+.|+++--.- --| +.|-+.||+|..++|+..+ +++.|||-+. .+=.+|
T Consensus 44 ~~~~~~E~~iv~l~G~~~V~~~g~~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~a~~-~~~~~v~sAp-~~~~~p 117 (270)
T 2qjv_A 44 LPSDERERCLVLVAGLASVXAADSFFYRIGQRMSPFERIPAYSVYLPHHTEAXVTAET-DLELAVCSAP-GFGELP 117 (270)
T ss_dssp ECCSSEEEEEEEEESCEEEEETTEEEEEECCCSSGGGCSCCCEEEECSSCCEEEEESS-SEEEEEEEEE-CCSCCC
T ss_pred ecCCCcEEEEEEecceEEEEECCEEEeccccccccccCCCCcEEEECCCCEEEEEecC-CceEEEEeee-cCCcCC
Confidence 34444577788999999999763322 223 2489999999999998744 7999999997 444444
No 117
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=79.63 E-value=4 Score=39.54 Aligned_cols=81 Identities=14% Similarity=0.047 Sum_probs=58.1
Q ss_pred cccEEEEEEeC--CCCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECC-CCCeeEEEEEEc
Q 011768 148 HGYAIHMYTAN--KSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIAEIF 224 (478)
Q Consensus 148 ~G~ai~~y~~~--~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~-~g~~rgyi~E~~ 224 (478)
..+.+++.... .++. +-....=++.+++++|.+.+.-.--..+|++||++.++.|....+.-+ +++.|-+++=-.
T Consensus 189 ~~~~~~~~~l~pG~~i~--~~~~h~~e~~~~il~G~~~~~~~~~~~~v~~GD~~~~~~~~~h~~~n~g~~~~~yl~~~d~ 266 (278)
T 1sq4_A 189 HDMHVNIVNFEPGGVIP--FAETHVMEHGLYVLEGKAVYRLNQDWVEVEAGDFMWLRAFCPQACYSGGPGRFRYLLYKDV 266 (278)
T ss_dssp CSEEEEEEEECSSSEES--CCCCCSEEEEEEEEECEEEEEETTEEEEEETTCEEEEEESCCEEEECCSSSCEEEEEEEEC
T ss_pred CCeEEEEEEECCCCCcC--CCCCCCccEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCCEEEEcCCCCCEEEEEEEEc
Confidence 45556555543 3332 112244468899999999999998899999999999999999998753 456776666555
Q ss_pred CCeeee
Q 011768 225 GTHFQL 230 (478)
Q Consensus 225 ~~~~~L 230 (478)
+.|..|
T Consensus 267 nr~~~~ 272 (278)
T 1sq4_A 267 NRHMRL 272 (278)
T ss_dssp SSCCCC
T ss_pred CCCccc
Confidence 677655
No 118
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=78.08 E-value=4.3 Score=42.92 Aligned_cols=47 Identities=9% Similarity=0.051 Sum_probs=37.5
Q ss_pred cCCCCCCCCCCCCCcccccceeeecccc-----c--cc---CCcCCCeeeeecCCCCC
Q 011768 343 VAEHTFRPPYYHRNCMSEFMGLIRGGYE-----A--KA---DGFLPGGASLHSCMTPH 390 (478)
Q Consensus 343 ~~e~TfRpPYyHrNv~sE~mg~i~G~y~-----a--r~---~gf~pG~~SLHp~g~pH 390 (478)
..++++++|-+|-| .+|+++++.|.-. . ++ ..+.+|-+-.-|.+.+|
T Consensus 330 L~pGgm~~PHwHp~-A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H 386 (466)
T 3kgl_A 330 IRQNAMVLPQWNAN-ANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSV 386 (466)
T ss_dssp EETTEEEEEEEESS-CCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred eecCcEeeeeECCC-CCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEEEECCCCeE
Confidence 46899999999988 4699999999732 1 11 23679999999999999
No 119
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=77.61 E-value=11 Score=36.98 Aligned_cols=75 Identities=9% Similarity=-0.096 Sum_probs=57.0
Q ss_pred ccccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECC-CCCeeEEEE
Q 011768 147 RHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP-DGPSRGYIA 221 (478)
Q Consensus 147 ~~G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~-~g~~rgyi~ 221 (478)
...+.+++.+...-....+--...-++.+++.+|.+.+.-.-...+|++||++.|+-++...+.-. +++.+-++-
T Consensus 183 ~~d~~~~~~t~~PG~~~p~~e~H~~eh~~~vL~G~g~y~l~~~~~~V~~GD~i~~~~~~~h~~~n~G~e~~~yl~y 258 (266)
T 4e2q_A 183 AYDFNIHTMDFQPGEFLNVKEVHYNQHGLLLLEGQGIYRLGDNWYPVQAGDVIWMAPFVPQWYAALGKTRSRYLLY 258 (266)
T ss_dssp TCSEEEEEEEECTTCBCSSCCCCSCCEEEEEEECEEEEEETTEEEEEETTCEEEECTTCCEEEEEESSSCEEEEEE
T ss_pred ccceEEEEEEECCCcCcCCceEcccceEEEEEeceEEEEECCEEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEE
Confidence 668888886666433222335566779999999999999999999999999999999999988643 345555443
No 120
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=74.10 E-value=3.7 Score=38.13 Aligned_cols=52 Identities=15% Similarity=0.275 Sum_probs=36.2
Q ss_pred CCEEEEEEeCcEEEEeece---------------------eeeecCCcEEEEcceeEEEEECCCCCeeEEEEEEc
Q 011768 171 GDFLVVPQKGRLWIATECG---------------------KLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 224 (478)
Q Consensus 171 GD~Li~pq~G~l~l~TEfG---------------------~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~~ 224 (478)
=+|=|.+..|.+.|..+-+ .+.++|||.+.||.|+.+++.. ++.-.+|.|+-
T Consensus 80 K~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIppg~~H~f~a--geegvli~EvS 152 (175)
T 2y0o_A 80 KQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIPPNTKHWFQA--GEEGAVVTEMS 152 (175)
T ss_dssp CCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEECTTCCEEEEE--EEEEEEEEEEE
T ss_pred CceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEECCCCcEEEEe--CCCCEEEEEEe
Confidence 3455556667766666543 3599999999999999999975 11125666753
No 121
>3gw6_A Endo-N-acetylneuraminidase; chaperone, glycosidase, hydrolase; HET: TAM; 2.60A {Enterobacteria phage K1F}
Probab=65.88 E-value=4.6 Score=40.14 Aligned_cols=44 Identities=27% Similarity=0.365 Sum_probs=36.9
Q ss_pred CCccccee-eeeecCCcccccccEEEEEEeCCCCCCcceecCCCC
Q 011768 129 TDFIDGLY-TICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGD 172 (478)
Q Consensus 129 ~Dfv~gl~-tl~g~gD~~~~~G~ai~~y~~~~sM~~~~f~NaDGD 172 (478)
.|=..|.| .|||-+-...-+|..|-+|.+|.+|++|+++|+.+.
T Consensus 41 ~~~~~~q~~i~~g~~~t~~~~~a~i~~~g~~~~~~~r~v~~~~~~ 85 (275)
T 3gw6_A 41 TDNPAGQRIIFCGGEGTSSTTGAQITLYGANNTDSRRIVYNGDEH 85 (275)
T ss_dssp SSCGGGCEEEEESSSSSSTTSBCEEEEEBSSSTTTTEEEEECSEE
T ss_pred CCCCCccEEEEecCCCCCCCCccEEEEecCCCCCcceeeeccccc
Confidence 45668888 666666666689999999999999999999998887
No 122
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=65.45 E-value=31 Score=31.83 Aligned_cols=72 Identities=17% Similarity=0.236 Sum_probs=47.7
Q ss_pred cEEEEEEeCCCCCCcceecCCCCEEEEEEeCcE-EEEe--eceee-------eecCCcE--EEEcceeEEEEECCCCCee
Q 011768 150 YAIHMYTANKSMDNCAFCNADGDFLVVPQKGRL-WIAT--ECGKL-------EVSPGEI--AVLPQGFRFAVSLPDGPSR 217 (478)
Q Consensus 150 ~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l-~l~T--EfG~L-------~v~pGd~--vVIPRGi~frv~l~~g~~r 217 (478)
-+|+.-....+ .+ .+--.+.||+++-|.|+. .|.. +-|.. .+..||. +|||.|+-+...+.+| .-
T Consensus 50 T~IYfLL~~g~-~S-~~HRv~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~Ge~pQ~vVP~G~wqaa~~~~g-~~ 126 (170)
T 1yud_A 50 SSIYFLLRTGE-VS-HFHRLTADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAGERPQFLVPKGCIFGSAMNQD-GF 126 (170)
T ss_dssp EEEEEEEETTC-CE-EEEECSSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTTEESCEEECTTCEEEEEESSS-SE
T ss_pred eEEEEEECCCC-CC-eeEEcCCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccCceeEEEECCCCEEEEEECCC-Cc
Confidence 44444444434 23 554458999999999974 4432 34443 2678998 9999999999887555 55
Q ss_pred EEEEEEc
Q 011768 218 GYIAEIF 224 (478)
Q Consensus 218 gyi~E~~ 224 (478)
.+|-++-
T Consensus 127 ~LV~C~V 133 (170)
T 1yud_A 127 SLVGCMV 133 (170)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 6665554
No 123
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=64.61 E-value=28 Score=34.10 Aligned_cols=69 Identities=22% Similarity=0.288 Sum_probs=50.2
Q ss_pred cEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECCCCCeeEEEEEEc
Q 011768 150 YAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 224 (478)
Q Consensus 150 ~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~~ 224 (478)
|.|.+|..+.+- -+- + .-+-|+-.|.-+..+-.+.|.+.|||-+.||.|+.+++....|--.-+|-|+-
T Consensus 139 L~v~Ly~~~~~~---~~~--~-~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~Pg~~H~F~ae~g~G~vligEVS 207 (246)
T 3kmh_A 139 LIVELWNADSNE---QTA--D-SDITVVIDGCRQKHTAGSQLRLSPGESICLPPGLYHSFWAEAGFGDVLVGEVS 207 (246)
T ss_dssp EEEEEEEBCTTS---SBC--C-SCEEEEETTEEEEECTTCEEEECTTCEEEECTTEEEEEEECTTSCCEEEEEEE
T ss_pred EEEEEEecCCCc---ccc--C-CCeEEecCCeEEEeCCCCEEEECCCCeEecCCCCEEEEEecCCCccEEEEEcc
Confidence 455777776441 111 2 25677888999999999999999999999999999999864442236677763
No 124
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=64.57 E-value=12 Score=32.81 Aligned_cols=49 Identities=10% Similarity=0.214 Sum_probs=33.7
Q ss_pred EEEEEeCcEEEE--eecee------eeecCCcEEEEcceeEEEEECCCCCeeEEEEEEc
Q 011768 174 LVVPQKGRLWIA--TECGK------LEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 224 (478)
Q Consensus 174 Li~pq~G~l~l~--TEfG~------L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~~ 224 (478)
.|-+.+|+|++. +|-|. +...+|+..+||-..-+||++ .++.+.+ +|.|
T Consensus 41 kL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~-sdD~~f~-leFy 97 (119)
T 3dl3_A 41 QICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIEL-SDDAQFN-INFW 97 (119)
T ss_dssp EEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEE-CTTCEEE-EEEE
T ss_pred EEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEE-CCCeEEE-EEEE
Confidence 355666766666 43332 457899999999999999995 5565554 3443
No 125
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=61.87 E-value=25 Score=36.74 Aligned_cols=47 Identities=13% Similarity=0.226 Sum_probs=39.2
Q ss_pred eecCCCCEEEEEEeCcEEEEeece-e--eeecCCcEEEEcceeEEEEECC
Q 011768 166 FCNADGDFLVVPQKGRLWIATECG-K--LEVSPGEIAVLPQGFRFAVSLP 212 (478)
Q Consensus 166 f~NaDGD~Li~pq~G~l~l~TEfG-~--L~v~pGd~vVIPRGi~frv~l~ 212 (478)
+...+|=.++++.+|++.|.+.-+ . +.+++||.++||.+..+++.-.
T Consensus 374 ~~~~~~~~illv~~G~g~i~~~~~~~~~~~l~~G~~~fvpa~~~~~i~g~ 423 (440)
T 1pmi_A 374 IEGLNGPSIVIATNGKGTIQITGDDSTKQKIDTGYVFFVAPGSSIELTAD 423 (440)
T ss_dssp ECCCSSCEEEEEEESEEEEEETTCGGGCEEEETTCEEEECTTCCEEEEEC
T ss_pred EecCCCcEEEEEEeCeEEEEeCCcccceEEeccCCEEEEeCCCcEEEEEe
Confidence 346688889999999999998655 4 8999999999999977777643
No 126
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=61.46 E-value=14 Score=36.79 Aligned_cols=44 Identities=14% Similarity=0.242 Sum_probs=36.7
Q ss_pred ecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEccee-EEEEE
Q 011768 167 CNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGF-RFAVS 210 (478)
Q Consensus 167 ~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi-~frv~ 210 (478)
...++=.++++.+|++.|.+.-+.+.+++||.++||.++ .+++.
T Consensus 265 ~~~~~~~il~v~~G~~~l~~~~~~~~l~~G~~~~vpa~~~~~~i~ 309 (319)
T 1qwr_A 265 AQDESFLICSVIEGSGLLKYEDKTCPLKKGDHFILPAQMPDFTIK 309 (319)
T ss_dssp CCCSSCEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCCCEEEE
T ss_pred ccCCccEEEEEEcCeEEEEECCEEEEEcCCcEEEEeCCCceEEEE
Confidence 344677899999999999986556899999999999987 57774
No 127
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=61.41 E-value=15 Score=32.63 Aligned_cols=32 Identities=16% Similarity=0.224 Sum_probs=23.7
Q ss_pred eecCCcEEEEcceeEEEEECCCCCeeEEEEEEc
Q 011768 192 EVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 224 (478)
Q Consensus 192 ~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~~ 224 (478)
...+|++++||.+.-+||++..++.+.. +|.|
T Consensus 68 l~~~~~~~~i~Pq~wH~Ve~lsdd~~f~-leFy 99 (127)
T 3bb6_A 68 LIEAGQFAVFPPEKWHNIEAMTDDTYFN-IDFF 99 (127)
T ss_dssp EEEBTBEEECCSSCEEEEEESSTTCEEE-EEEE
T ss_pred EeCCCCceEECCCCcEEEEEcCCCEEEE-EEEE
Confidence 4678899999999999999745455443 4444
No 128
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=60.24 E-value=9.6 Score=36.11 Aligned_cols=83 Identities=12% Similarity=0.142 Sum_probs=52.4
Q ss_pred cceeeeeecCCcccccccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECC
Q 011768 133 DGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLP 212 (478)
Q Consensus 133 ~gl~tl~g~gD~~~~~G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~ 212 (478)
.|+..+.=..|. .+.+++.-+.++..+. .-. ..|.|| |+.+|++.-. .-.+.+|+++-+|-|........
T Consensus 133 ~Gv~~~~L~~~~--~E~v~l~r~~~G~~~~--~~~-hgG~Ei-lVL~G~~~d~----~~~~~~GsWlR~P~gs~h~~~ag 202 (223)
T 3o14_A 133 EGISTSLLHEDE--RETVTHRKLEPGANLT--SEA-AGGIEV-LVLDGDVTVN----DEVLGRNAWLRLPEGEALSATAG 202 (223)
T ss_dssp TTEEEEEEEECS--SCEEEEEEECTTCEEE--ECC-SSCEEE-EEEEEEEEET----TEEECTTEEEEECTTCCEEEEEE
T ss_pred CCeEEEEEecCC--CcEEEEEEECCCCccC--CCC-CCcEEE-EEEEeEEEEC----CceECCCeEEEeCCCCccCcEEC
Confidence 355544444443 3455666666665442 112 278886 8889997532 34799999999999998887652
Q ss_pred CCCeeEEEEEEcCCee
Q 011768 213 DGPSRGYIAEIFGTHF 228 (478)
Q Consensus 213 ~g~~rgyi~E~~~~~~ 228 (478)
+..++.||=. +|+
T Consensus 203 ~~g~~i~~k~---ghl 215 (223)
T 3o14_A 203 ARGAKIWMKT---GHL 215 (223)
T ss_dssp EEEEEEEEEE---SGG
T ss_pred CCCeEEEEEe---cCC
Confidence 3356666644 555
No 129
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=58.02 E-value=12 Score=34.02 Aligned_cols=86 Identities=9% Similarity=0.015 Sum_probs=57.7
Q ss_pred CCCCCccccCCCC----CCCCCCCcccceeeeeecCCcccccccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEe
Q 011768 111 YTTPTQLRWKPVD----IPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIAT 186 (478)
Q Consensus 111 ~~~P~~lrW~p~~----~p~~~~Dfv~gl~tl~g~gD~~~~~G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~T 186 (478)
.+.++.+.|.|.| .+ ++ -++.|. +|+. .|-.+.+.+.-....-.. --..|.+-+++.+|+...+
T Consensus 13 ~v~~d~~~W~p~P~~l~~~--Gv----~~k~L~--~~~e--~g~~t~lvr~~pG~~~p~-H~H~g~ee~~VL~G~~~~~- 80 (153)
T 3bal_A 13 YVKISDNNYVPFPEAFSDG--GI----TWQLLH--SSPE--TSSWTAIFNCPAGSSFAS-HIHAGPGEYFLTKGKMEVR- 80 (153)
T ss_dssp EEECCGGGCEECCGGGEES--CC----EEEEEE--EETT--TTEEEEEEEECTTEEECC-EEESSCEEEEEEESEEEET-
T ss_pred EEccccCceecCCCccCCC--Ce----EEEEEE--ECCc--cceEEEEEEeCCCCCccC-ccCCCCEEEEEEEEEEEec-
Confidence 4568899999997 32 22 356664 4443 577777776665431111 2345667789999999774
Q ss_pred ecee----eeecCCcEEEEcceeEEEE
Q 011768 187 ECGK----LEVSPGEIAVLPQGFRFAV 209 (478)
Q Consensus 187 EfG~----L~v~pGd~vVIPRGi~frv 209 (478)
.|. -..++|+|+..|.|.++..
T Consensus 81 -~Gd~~~~~~~~aGsYv~ePpGs~H~p 106 (153)
T 3bal_A 81 -GGEQEGGSTAYAPSYGFESSGALHGK 106 (153)
T ss_dssp -TCGGGTSEEEESSEEEEECTTCEESC
T ss_pred -CccccCccccCCCeEEEcCCCCcccc
Confidence 443 3467999999999999973
No 130
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=55.54 E-value=27 Score=35.82 Aligned_cols=59 Identities=14% Similarity=0.175 Sum_probs=44.7
Q ss_pred ccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEccee-EEEEE
Q 011768 149 GYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGF-RFAVS 210 (478)
Q Consensus 149 G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi-~frv~ 210 (478)
-+++..+..+.. . .-...+|-.++++.+|++.|.+.-+.+.+++||.++||.+. .++++
T Consensus 323 ~F~v~~~~l~~~--~-~~~~~~~~~il~v~~G~~~l~~~~~~~~l~~G~~~fvpa~~~~~~i~ 382 (394)
T 2wfp_A 323 DFAFSLHDLALQ--E-TSIGQHSAAILFCVEGEAVLRKDEQRLVLKPGESAFIGADESPVNAS 382 (394)
T ss_dssp SCEEEEEECCSS--C-EEECCSSCEEEEEEEEEEEEEETTEEEEECTTCEEEECGGGCCEEEE
T ss_pred EEEEEEEEEcCC--e-EEecCCCcEEEEEEeceEEEEECCeEEEEccCcEEEEeCCCceEEEE
Confidence 455666655422 1 22366788899999999999987777999999999999984 67774
No 131
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=52.58 E-value=20 Score=35.34 Aligned_cols=56 Identities=13% Similarity=0.283 Sum_probs=41.7
Q ss_pred cEEEEEEeCCCCCCcceecCCCC-EEEEEEeCcEEEEeeceeeeecCCcEEEEccee-EEEEE
Q 011768 150 YAIHMYTANKSMDNCAFCNADGD-FLVVPQKGRLWIATECGKLEVSPGEIAVLPQGF-RFAVS 210 (478)
Q Consensus 150 ~ai~~y~~~~sM~~~~f~NaDGD-~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi-~frv~ 210 (478)
+++..+..+... .+.. ++= .++++.+| +.|.+.-+.+.+++||.++||.++ .|++.
T Consensus 230 F~v~~~~~~~~~---~~~~-~~~~~il~v~~G-~~i~~~~~~~~l~~G~~~~ipa~~~~~~i~ 287 (300)
T 1zx5_A 230 FGLEVVDVTGTA---EIKT-GGVMNILYAAEG-YFILRGKETADLHRGYSCLVPASTDSFTVE 287 (300)
T ss_dssp EEEEEEEEEEEE---EEEC-CSBCEEEEEEES-CEEEESSSEEEECTTCEEEECTTCCEEEEE
T ss_pred EEEEEEEECCce---EEec-CCceEEEEEccc-EEEEeCCeEEEEccceEEEEeCCCceEEEE
Confidence 455555554321 2344 666 69999999 999986557999999999999998 68874
No 132
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=50.86 E-value=1.2e+02 Score=29.32 Aligned_cols=87 Identities=18% Similarity=0.222 Sum_probs=56.1
Q ss_pred ceeeeeecC----CcccccccEEEEEEeCCCCCCcceecCCCC-EEEEEEeCcEEEEeec-eeeeecCCcEEEEcceeEE
Q 011768 134 GLYTICGAG----SSFLRHGYAIHMYTANKSMDNCAFCNADGD-FLVVPQKGRLWIATEC-GKLEVSPGEIAVLPQGFRF 207 (478)
Q Consensus 134 gl~tl~g~g----D~~~~~G~ai~~y~~~~sM~~~~f~NaDGD-~Li~pq~G~l~l~TEf-G~L~v~pGd~vVIPRGi~f 207 (478)
.++.|+|.. ...+++.+.+.-...... .++-...+++ -.+++-+|++.|..+- +...+.+||-++|-.+-..
T Consensus 162 ~~~lIag~~G~~~p~~~~~~~~~~~~~L~~g--~~~~~~~~~~~~~l~v~~G~v~v~g~~~~~~~l~~gd~~~l~~~~~l 239 (256)
T 2vec_A 162 KQQLIASPEGAMGSLQLRQQVWLHHIVLDKG--ESANFQLHGPRAYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANI 239 (256)
T ss_dssp SEEEEEESSCGGGCEECSSSCEEEEEEECTT--CEEEEECSSSEEEEEEEESCEEEEETTEEEEEECTTCEEEEESCSEE
T ss_pred CEEEEEeCCCCCCceEccCCcEEEEEEECCC--CEEEEecCCCeEEEEEEECEEEECCccccceEECCCCEEEECCCCeE
Confidence 567888742 223456666655555433 3343443333 5667789999986311 1356999999999877777
Q ss_pred EEECCCCCeeEEEEEE
Q 011768 208 AVSLPDGPSRGYIAEI 223 (478)
Q Consensus 208 rv~l~~g~~rgyi~E~ 223 (478)
++.. +.++|.+++|.
T Consensus 240 ~l~a-~~~a~~LL~dl 254 (256)
T 2vec_A 240 TLVA-DSPLRALLIDL 254 (256)
T ss_dssp EEEE-SSSEEEEEEEE
T ss_pred EEEe-CCCCEEEEEEe
Confidence 7765 35789999986
No 133
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=49.52 E-value=3.3 Score=37.34 Aligned_cols=47 Identities=17% Similarity=0.111 Sum_probs=35.4
Q ss_pred cCCCCCCCCCCCCCcccccceeeeccccc--------ccCCcCCCeeeeecCCCCCC
Q 011768 343 VAEHTFRPPYYHRNCMSEFMGLIRGGYEA--------KADGFLPGGASLHSCMTPHG 391 (478)
Q Consensus 343 ~~e~TfRpPYyHrNv~sE~mg~i~G~y~a--------r~~gf~pG~~SLHp~g~pHG 391 (478)
..+++.++|. |.|. .|+++.+.|...- +...+.+|-+-.-|.+++|.
T Consensus 48 l~pg~~~~pH-h~~a-~E~~yVl~G~~~v~v~~~~~~~~~~l~~GDv~~~P~g~~H~ 102 (178)
T 1dgw_A 48 SKPNTLLLPH-HSDS-DLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFY 102 (178)
T ss_dssp ECTTEEEEEE-EESS-EEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEE
T ss_pred ecCCcEecCc-CCCC-CEEEEEEeEEEEEEEEeCCCcEEEEECCCCEEEECCCCeEE
Confidence 3567778885 6543 6999999998432 22358999999999999994
No 134
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=48.12 E-value=35 Score=34.07 Aligned_cols=97 Identities=16% Similarity=0.223 Sum_probs=59.9
Q ss_pred CCccccCCCCCCCCCCCcc-cceeeeeecCCcccccccEEEEEEeCCCC--CCcceecCCCCEEEEEEeCcEEEEeecee
Q 011768 114 PTQLRWKPVDIPDSPTDFI-DGLYTICGAGSSFLRHGYAIHMYTANKSM--DNCAFCNADGDFLVVPQKGRLWIATECGK 190 (478)
Q Consensus 114 P~~lrW~p~~~p~~~~Dfv-~gl~tl~g~gD~~~~~G~ai~~y~~~~sM--~~~~f~NaDGD~Li~pq~G~l~l~TEfG~ 190 (478)
|...-|....+|. .-. ..+|+|.-.+| |-+-......... +. -+..+|-+ +|+.+|++. +|-
T Consensus 62 ~~~~~w~~~~~p~---~~~~gs~RlLs~~d~-----GaSTl~V~fpp~~~~P~-Gi~~ad~E--~fVL~G~i~----~G~ 126 (303)
T 2qdr_A 62 MEKQGWRVRGMPD---NIAPGSRRLLTWHDS-----GASTSRVVLPPKFEAPS-GIFTADLE--IFVIKGAIQ----LGE 126 (303)
T ss_dssp CCEEEECCTTSCT---TSCCEEEEEEEECTT-----SCEEEEEEECTTCEECC-BEESSCEE--EEEEESEEE----ETT
T ss_pred hhhcCcccCCCCC---CcCccceeecccCCC-----CcceEEEEecCCCCCCC-cccccceE--EEEEEeEEE----eCC
Confidence 5566688888872 222 34666654322 1111222222121 22 34455555 999999885 588
Q ss_pred eeecCCcEEEEcceeEE---EEECCCCCeeEEEEEEcCC
Q 011768 191 LEVSPGEIAVLPQGFRF---AVSLPDGPSRGYIAEIFGT 226 (478)
Q Consensus 191 L~v~pGd~vVIPRGi~f---rv~l~~g~~rgyi~E~~~~ 226 (478)
=.+.+|.|+.||+|++. +| |-..++-++..|+.+.
T Consensus 127 ~~l~~h~Y~f~PaGV~~~~~kv-~~~~g~~iL~fe~g~~ 164 (303)
T 2qdr_A 127 WQLNKHSYSFIPAGVRIGSWKV-LGGEEAEILWMENGSV 164 (303)
T ss_dssp EEECTTEEEEECTTCCBCCEEE-ETTSCEEEEEEECSSS
T ss_pred EEecCCceEEecCCCccCceee-cCCCCcEEEEEecCCc
Confidence 89999999999999965 44 3344788888898655
No 135
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=42.54 E-value=22 Score=37.93 Aligned_cols=46 Identities=28% Similarity=0.338 Sum_probs=39.5
Q ss_pred CCCcccceeeeeecCCccc-ccccEEEEEEeCCCCCCcceecCCCCE
Q 011768 128 PTDFIDGLYTICGAGSSFL-RHGYAIHMYTANKSMDNCAFCNADGDF 173 (478)
Q Consensus 128 ~~Dfv~gl~tl~g~gD~~~-~~G~ai~~y~~~~sM~~~~f~NaDGD~ 173 (478)
++|=..|.|+|..-|+-+. -+|..|-+|.+|.+|.+|+.+|+++.+
T Consensus 589 p~d~p~gqrli~~gge~tss~~ga~itl~g~n~~~~~r~~~~~~~~l 635 (670)
T 3ju4_A 589 PTDNPAGQRIIFCGGEGTSSTTGAQITLYGANNTDSRRIVYNGDEHL 635 (670)
T ss_dssp CSSCGGGCEEEEESSSSSSGGGSCEEEEECTTSSSTTCEEEECSCCC
T ss_pred CCCCCCccEEEEeCCCCCcCCCccEEEEecCCCCCcceeEEcccccc
Confidence 4577789999887787555 689999999999999999999999865
No 136
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=41.92 E-value=19 Score=35.80 Aligned_cols=57 Identities=23% Similarity=0.517 Sum_probs=42.0
Q ss_pred eeeeecCCcEEEEcceeEEEEECCCCCeeEE-EEEEcCCe---eeeCCCCCCCCCCCCCCCCccCCccc
Q 011768 189 GKLEVSPGEIAVLPQGFRFAVSLPDGPSRGY-IAEIFGTH---FQLPDLGPIGANGLAAPRDFLVPTAW 253 (478)
Q Consensus 189 G~L~v~pGd~vVIPRGi~frv~l~~g~~rgy-i~E~~~~~---~~LPelGpiG~nglan~RDf~~P~a~ 253 (478)
=.+.++|||.+.||.|+.+.+- .|. ++|+-... +|+=|.+=+|.+| ++|.+..+.+.
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~------~G~~~~Eiq~~SD~t~R~yDy~R~g~~g--~pr~lhv~~~~ 218 (319)
T 1qwr_A 158 RRIKIKPGDFYYVPSGTLHALC------KGALVLETQQNSDATYRVYDYDRLDSNG--SPRELHFAKAV 218 (319)
T ss_dssp EEEECCTTCEEEECTTCCEEEC------SSEEEEEEEESCCCCEEEECTTCBCTTS--CBCCCCHHHHH
T ss_pred eEEEcCCCCEEEcCCCCceEec------CCCeEEEEEeCCccEEEcccccccCCCC--CcccCCHHHHH
Confidence 5688999999999999999983 355 89986443 8887887777664 45655554443
No 137
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=41.10 E-value=1e+02 Score=25.89 Aligned_cols=57 Identities=18% Similarity=0.140 Sum_probs=48.4
Q ss_pred cceecCCCCEEEEEEeCcEEEEeec--eeeeecCCcEEEEcceeEEEEECCCCCeeEEEEE
Q 011768 164 CAFCNADGDFLVVPQKGRLWIATEC--GKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAE 222 (478)
Q Consensus 164 ~~f~NaDGD~Li~pq~G~l~l~TEf--G~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E 222 (478)
.+-.|.+.-|+.=+..|+++++=.- -...+++||--.||...+|++...+ .--|+|+
T Consensus 34 eytF~T~~~E~M~vvsG~~~V~lpg~~ew~~~~aGesF~Vpans~F~l~v~~--~~~YlC~ 92 (94)
T 2oyz_A 34 EYTFGTQAPERMTVVKGALVVKRVGEADWTTYSSGESFDVEGNSSFELQVKD--ATAYLCE 92 (94)
T ss_dssp EEEEEESSCEEEEEEESEEEEEETTCSSCEEEETTCEEEECSSEEEEEEESS--CEEEEEE
T ss_pred EEEEcCCCeEEEEEEEeEEEEEcCCCCcCEEECCCCEEEECCCCEEEEEEcc--cEeEEEE
Confidence 3667888889999999999998663 3789999999999999999998854 4688887
No 138
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=39.12 E-value=12 Score=31.32 Aligned_cols=22 Identities=32% Similarity=0.613 Sum_probs=18.5
Q ss_pred eecCCcEEEEcceeEEEEECCC
Q 011768 192 EVSPGEIAVLPQGFRFAVSLPD 213 (478)
Q Consensus 192 ~v~pGd~vVIPRGi~frv~l~~ 213 (478)
+|++||++|||+|-.+-..-..
T Consensus 9 ~l~~G~v~vVPq~~~v~~~A~~ 30 (93)
T 1dgw_Y 9 TLSEGDIIVIPSSFPVALKAAS 30 (93)
T ss_dssp EECTTCEEEECTTCCEEEEESS
T ss_pred eecCCcEEEECCCCceeEEecC
Confidence 4899999999999999776543
No 139
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=36.63 E-value=89 Score=29.09 Aligned_cols=88 Identities=8% Similarity=0.077 Sum_probs=55.1
Q ss_pred ceeeeeecCCcccccccEEEEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEe----e-------ceeeeecCCcEEEEc
Q 011768 134 GLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIAT----E-------CGKLEVSPGEIAVLP 202 (478)
Q Consensus 134 gl~tl~g~gD~~~~~G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~T----E-------fG~L~v~pGd~vVIP 202 (478)
.+.+|-.+++-.. =+-+.+|...+. . -.-|..+.-++.+.+|++.-+- + -+...+.+||.+.++
T Consensus 67 ~r~lL~~dp~~~~--~v~~l~w~PGq~--s-piHdH~~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~ 141 (208)
T 2gm6_A 67 QQMLLHCDSAERF--SIVSFVWGPGQR--T-PIHDHTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVS 141 (208)
T ss_dssp EEEEEEECTTSSC--EEEEEEECTTCB--C-CSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEB
T ss_pred eEEEeecCCCCCE--EEEEEEeCCCcc--c-CcccCCcceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEEC
Confidence 4555555432111 233344444443 2 3345556899999999997642 2 246779999999999
Q ss_pred c--eeEEEEECCCCCeeEEEEEEcCC
Q 011768 203 Q--GFRFAVSLPDGPSRGYIAEIFGT 226 (478)
Q Consensus 203 R--Gi~frv~l~~g~~rgyi~E~~~~ 226 (478)
. |-.++|.-..+......+.+|+.
T Consensus 142 ~~~g~iH~V~N~~~~~~avsLHvY~~ 167 (208)
T 2gm6_A 142 PTVGDIHRVHNAYDDRVSISIHVYGA 167 (208)
T ss_dssp TTTBCCEEEEESCSSSCEEEEEEESS
T ss_pred CCCCCeEEeccCCCCCcEEEEEEEcC
Confidence 9 99999973333344677777744
No 140
>3hsh_A Endostatin, collagen alpha-1(XVIII) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association; 1.80A {Homo sapiens} PDB: 3hon_A
Probab=36.06 E-value=6.5 Score=30.35 Aligned_cols=51 Identities=16% Similarity=0.285 Sum_probs=44.1
Q ss_pred EEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcc
Q 011768 153 HMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQ 203 (478)
Q Consensus 153 ~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPR 203 (478)
.+|.--..|-+.+-+.++|.+.++.-+++|-|+.--|.=.|.-|..+=|||
T Consensus 6 ~~~~t~~~M~~~~~~~~eGtL~yv~d~~eLyiRVr~Gwr~v~Lg~~ip~p~ 56 (56)
T 3hsh_A 6 RLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPR 56 (56)
T ss_dssp EEESSHHHHHHHGGGSCTTCEEEETTTTEEEEEETTEEEEECEEEEEECCC
T ss_pred EEeecHHHHHhhcccCCCeeEEEEEecceEEEEEcCceeeeeecccccCCC
Confidence 456555567566889999999999999999999999999999999998887
No 141
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=35.71 E-value=2.3e+02 Score=27.45 Aligned_cols=84 Identities=8% Similarity=0.039 Sum_probs=52.8
Q ss_pred eeeeeec--C---CcccccccEEEEEEeCCCCCCccee--cCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcc-e--
Q 011768 135 LYTICGA--G---SSFLRHGYAIHMYTANKSMDNCAFC--NADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQ-G-- 204 (478)
Q Consensus 135 l~tl~g~--g---D~~~~~G~ai~~y~~~~sM~~~~f~--NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPR-G-- 204 (478)
++.|+|. | -..+.+.+.+.-...... .++-. .++-.-.+++-+|++.|.-+ .-.+.+||.++|-. |
T Consensus 147 ~rviaG~~~g~~~p~~~~~~~~~~~~~L~~g--~~~~~~~~~~~~~~lyv~~G~v~v~g~--~~~l~~~d~~~~~~~~~~ 222 (277)
T 2p17_A 147 IRVFSGSSKGVKAPTKNIVPVTMVEMIVEPG--TTVVQDLPGHYNGFLYILEGSGVFGAD--NIEGKAGQALFFSRHNRG 222 (277)
T ss_dssp EEEEESEETTEECCCCCSSCEEEEEEEECTT--CEEEEEEETTCEEEEEEEESEEEETTT--TEEEETTEEEEECCCCTT
T ss_pred EEEEEcCccCCCCceecCCCCEEEEEEECCC--CEEEeccCCCCEEEEEEEeCeEEECCC--ceEeCCCcEEEEcCCCCC
Confidence 5778875 2 234455555554444432 22222 23334678888999888421 24689999999986 7
Q ss_pred --eEEEEECCCCCeeEEEEEE
Q 011768 205 --FRFAVSLPDGPSRGYIAEI 223 (478)
Q Consensus 205 --i~frv~l~~g~~rgyi~E~ 223 (478)
-...+... .+++.+++.-
T Consensus 223 ~~~~l~l~a~-~~a~~Ll~~G 242 (277)
T 2p17_A 223 EETELNVTAR-EKLRLLLYAG 242 (277)
T ss_dssp CEEEEEEEES-SSEEEEEEEE
T ss_pred ccceEEEEeC-CCcEEEEEec
Confidence 66666653 3689998884
No 142
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=35.12 E-value=24 Score=31.60 Aligned_cols=21 Identities=33% Similarity=0.501 Sum_probs=18.6
Q ss_pred eeecCCcEEEEcceeEEEEEC
Q 011768 191 LEVSPGEIAVLPQGFRFAVSL 211 (478)
Q Consensus 191 L~v~pGd~vVIPRGi~frv~l 211 (478)
..++|||+++||+|--+.|.-
T Consensus 203 ~~l~pGD~LyiP~gW~H~V~~ 223 (235)
T 4gjz_A 203 CILSPGEILFIPVKYWHYVRA 223 (235)
T ss_dssp EEECTTCEEEECTTCEEEEEE
T ss_pred EEECCCCEEEeCCCCcEEEEE
Confidence 358999999999999999974
No 143
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=34.69 E-value=65 Score=30.95 Aligned_cols=45 Identities=16% Similarity=0.217 Sum_probs=35.1
Q ss_pred ecCCCCEEEEEEeCcEEE----EeeceeeeecC-C---cEEEEcceeEEEEEC
Q 011768 167 CNADGDFLVVPQKGRLWI----ATECGKLEVSP-G---EIAVLPQGFRFAVSL 211 (478)
Q Consensus 167 ~NaDGD~Li~pq~G~l~l----~TEfG~L~v~p-G---d~vVIPRGi~frv~l 211 (478)
.+.+-.+++++.+|++++ .|.-=...+.. | +.+.||.|+.+.+.-
T Consensus 289 ~h~~~~e~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~g~~h~~~n 341 (369)
T 3st7_A 289 WHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIEN 341 (369)
T ss_dssp ECSSCCEEEEEEESEEEEEEEETTCCCCEEEEEETTBCCEEEECTTEEEEEEE
T ss_pred cccCcceEEEEEeeeEEEEEEcCCCCcEEEEEecCCcceEEEeCCCceEEeEE
Confidence 445667788888999999 45444566777 8 899999999999864
No 144
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=33.00 E-value=2e+02 Score=27.37 Aligned_cols=82 Identities=10% Similarity=0.093 Sum_probs=52.3
Q ss_pred eeeeecCC----cccccccEEEEEEeCCCCCCcceecCC-CC-EEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEE
Q 011768 136 YTICGAGS----SFLRHGYAIHMYTANKSMDNCAFCNAD-GD-FLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAV 209 (478)
Q Consensus 136 ~tl~g~gD----~~~~~G~ai~~y~~~~sM~~~~f~NaD-GD-~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv 209 (478)
+.|+|... ..+.+.+.+........ .++-.... |- -.+++.+|++.|. | -.+.+||.++|-.+-..++
T Consensus 142 ~~iag~~g~~~p~~~~~~~~~~~~~l~~g--~~~~~~~~~~~~~~~~v~~G~v~v~---g-~~l~~gd~~~~~~~~~l~l 215 (242)
T 1tq5_A 142 QLVLSPDARDGSLKVHQDMELYRWALLKD--EQSVHQIAAERRVWIQVVKGNVTIN---G-VKASTSDGLAIWDEQAISI 215 (242)
T ss_dssp EEEEESSCGGGCEECSSSCEEEEEEECTT--CEEEECCCTTCEEEEEEEESEEEET---T-EEEETTCEEEEESCSCEEE
T ss_pred EEEEecCCCCCcEeccCCCEEEEEEECCC--CEEEeecCCCcEEEEEEccCcEEEC---C-EEeCCCCEEEECCCCeEEE
Confidence 77777622 22445555555554432 22333332 22 4577889999884 3 3699999999988776777
Q ss_pred ECCCCCeeEEEEEEc
Q 011768 210 SLPDGPSRGYIAEIF 224 (478)
Q Consensus 210 ~l~~g~~rgyi~E~~ 224 (478)
.. ..++|.++++.-
T Consensus 216 ~a-~~~a~~Ll~~~~ 229 (242)
T 1tq5_A 216 HA-DSDSEVLLFDLP 229 (242)
T ss_dssp EE-SSSEEEEEEEEC
T ss_pred Ee-CCCCEEEEEECC
Confidence 65 457899998864
No 145
>3n3f_A Collagen alpha-1(XV) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association, chain selection helix; 2.00A {Homo sapiens}
Probab=26.36 E-value=8.8 Score=29.38 Aligned_cols=50 Identities=18% Similarity=0.323 Sum_probs=41.3
Q ss_pred EEEEeCCCCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEc
Q 011768 153 HMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLP 202 (478)
Q Consensus 153 ~~y~~~~sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIP 202 (478)
.+|.-...|-+.+-+..+|.+.++..+++|-|+..-|.=.|.-|+++-||
T Consensus 4 ~~~~t~~~M~~~~~~~~eGtL~yv~d~~eLyiRVr~Gwr~v~Lg~~ip~p 53 (54)
T 3n3f_A 4 TAFSNMDDMLQKAHLVIEGTFIYLRDSTEFFIRVRDGWKKLQLGELIPIP 53 (54)
T ss_dssp EEESSHHHHHTTGGGSCTTEEEEETTTTEEEEEETTEEEECCCCCCCCCC
T ss_pred eEeecHHHHHhhCccCCCeeEEEEEecceEEEEEcCceeeeeccccccCC
Confidence 34555556655688999999999999999999999999999988876655
No 146
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=26.31 E-value=47 Score=32.70 Aligned_cols=49 Identities=12% Similarity=0.024 Sum_probs=35.6
Q ss_pred eceeeeecCCcEEEEcceeEEEEECCCCCeeEEEEEEcC-CeeeeCCCCCCCCCCCCCCCCccCCccc
Q 011768 187 ECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG-THFQLPDLGPIGANGLAAPRDFLVPTAW 253 (478)
Q Consensus 187 EfG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~~~-~~~~LPelGpiG~nglan~RDf~~P~a~ 253 (478)
-+=.+.++|||.+.||.|+.+.+- .|.++|+-. +-..+ ++|.+..+.+.
T Consensus 156 lLn~v~l~pGd~~~ipaGt~HA~~------~G~~~Eiqa~SD~t~------------~pr~l~v~~~~ 205 (300)
T 1zx5_A 156 LLNTFETTPYDTFVIRPGIPHAGE------GLRVLEVSSNSTLAY------------FFNENDWEKVK 205 (300)
T ss_dssp GEEEEECCTTCEEEECTTCCEEEE------SEEEEEEEESCCCCE------------ESSTTTHHHHH
T ss_pred HhceeECCCCCEEEcCCCCceEcC------CCCeeeecccCCcee------------ecccCCHHHHH
Confidence 355778999999999999999884 377999863 22323 67766665554
No 147
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=26.00 E-value=63 Score=25.81 Aligned_cols=31 Identities=26% Similarity=0.423 Sum_probs=22.8
Q ss_pred cCCCCEEEEEEeCcEEEEeeceeeeecCCcEE
Q 011768 168 NADGDFLVVPQKGRLWIATECGKLEVSPGEIA 199 (478)
Q Consensus 168 NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~v 199 (478)
+...+.++++.+|.+++...- ...+.|||++
T Consensus 49 g~~~~~~y~i~~G~v~~~~~~-~~~~~~G~~~ 79 (138)
T 1vp6_A 49 GEPGDRMFFVVEGSVSVATPN-PVELGPGAFF 79 (138)
T ss_dssp TSCCCEEEEEEESCEEECSSS-CEEECTTCEE
T ss_pred CCCcceEEEEEeeEEEEEeCC-cceECCCCEe
Confidence 344788999999999997653 4456777754
No 148
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=25.21 E-value=57 Score=28.50 Aligned_cols=31 Identities=23% Similarity=0.234 Sum_probs=21.8
Q ss_pred cCCCCEEEEEEeCcEEEEeeceee-eecCCcE
Q 011768 168 NADGDFLVVPQKGRLWIATECGKL-EVSPGEI 198 (478)
Q Consensus 168 NaDGD~Li~pq~G~l~l~TEfG~L-~v~pGd~ 198 (478)
+..+|.|+|+.+|.+.+.++-|.. .+.+||+
T Consensus 110 g~~~~~ly~I~~G~v~v~~~~g~~~~l~~G~~ 141 (202)
T 3bpz_A 110 GTIGKKMYFIQHGVVSVLTKGNKEMKLSDGSY 141 (202)
T ss_dssp TSBCCEEEEEEECEEEEECTTSCCEEEETTCE
T ss_pred CCcCCeEEEEeccEEEEEECCCeEEEEcCCCE
Confidence 345789999999999998765542 2444443
No 149
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=23.43 E-value=80 Score=27.37 Aligned_cols=44 Identities=18% Similarity=0.242 Sum_probs=27.3
Q ss_pred EEEEEEeCCCCCCcce-ecCCCCEEEEEEeCcEEEEeeceee--eecCCcE
Q 011768 151 AIHMYTANKSMDNCAF-CNADGDFLVVPQKGRLWIATECGKL--EVSPGEI 198 (478)
Q Consensus 151 ai~~y~~~~sM~~~~f-~NaDGD~Li~pq~G~l~l~TEfG~L--~v~pGd~ 198 (478)
....|.++.- .| .+..+|.|+|+.+|.+.+..+-|.. .+.+||+
T Consensus 95 ~~~~~~~ge~----I~~~G~~~~~ly~I~~G~v~~~~~~g~~~~~l~~G~~ 141 (198)
T 2ptm_A 95 EFEVFQPADY----VIQEGTFGDRMFFIQQGIVDIIMSDGVIATSLSDGSY 141 (198)
T ss_dssp EEEEECTTCE----EECTTSCCSEEEEEEECCEEEECTTSCEEEEECTTCE
T ss_pred cceeeCCCCE----EEECCCcCcEEEEEEeCEEEEEecCCeEEEEecCCCE
Confidence 3455555522 33 3445788999999999998765642 2444443
No 150
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=22.17 E-value=87 Score=24.94 Aligned_cols=19 Identities=21% Similarity=0.246 Sum_probs=15.6
Q ss_pred cCCCCEEEEEEeCcEEEEe
Q 011768 168 NADGDFLVVPQKGRLWIAT 186 (478)
Q Consensus 168 NaDGD~Li~pq~G~l~l~T 186 (478)
+..++.++++.+|.+++..
T Consensus 44 g~~~~~~y~i~~G~v~~~~ 62 (142)
T 3mdp_A 44 NSKADNLMLLLEGGVELFY 62 (142)
T ss_dssp TSBCCEEEEEEESCEEEEC
T ss_pred CCCCCcEEEEEeCEEEEEE
Confidence 4448899999999999864
No 151
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=21.74 E-value=3.9e+02 Score=23.09 Aligned_cols=58 Identities=9% Similarity=0.045 Sum_probs=49.5
Q ss_pred ceecCCCCEEEEEEeCcEEEEee--ceeeeecCCcEEEEcceeEEEEECCCCCeeEEEEEEc
Q 011768 165 AFCNADGDFLVVPQKGRLWIATE--CGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIF 224 (478)
Q Consensus 165 ~f~NaDGD~Li~pq~G~l~l~TE--fG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~~ 224 (478)
+-.+.+.-|+.-+..|+++++=. --...+++||--.||..-.|++...+ ..-|+|+-.
T Consensus 51 YtF~T~~~E~MevvsG~l~V~Lpg~~eW~~~~aGesF~VpanssF~lkv~~--~~~Y~C~y~ 110 (111)
T 3hqx_A 51 LTFETHVPERMEIISGECRVKIADSTESELFRAGQSFYVPGNSLFKIETDE--VLDYVCHLE 110 (111)
T ss_dssp EEEECSSCEEEEEEESEEEEEETTCSSCEEEETTCEEEECTTCEEEEECSS--CEEEEEEEC
T ss_pred eEEcCCCcEEEEEEEeEEEEEcCCcccCEEeCCCCEEEECCCCcEEEEECc--ceeEEEEcC
Confidence 66888899999999999998854 35788999999999999999999854 678999853
No 152
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=21.46 E-value=4.5e+02 Score=23.65 Aligned_cols=102 Identities=14% Similarity=0.076 Sum_probs=62.5
Q ss_pred CccccCCCCCCCCCCCcccceeeeeecCCcccccccEEEEEEeCCCCCCcceecCCCC-EEEEEEeCcEEEEee------
Q 011768 115 TQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGD-FLVVPQKGRLWIATE------ 187 (478)
Q Consensus 115 ~~lrW~p~~~p~~~~Dfv~gl~tl~g~gD~~~~~G~ai~~y~~~~sM~~~~f~NaDGD-~Li~pq~G~l~l~TE------ 187 (478)
+.-.|.|+.....+ +- -.+.+|..++..+ +-+-+|.+.+. . -.-|..|. -++.+.+|++..+.-
T Consensus 42 ~~~~w~~~~~~~~~-~~-YtR~ll~~~~~~~----v~~l~W~PGq~--S-~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~ 112 (171)
T 3eqe_A 42 AAKLSQPYIKEPDQ-YA-YGRNAIYRNNELE----IIVINIPPNKE--T-TVHDHGQSIGCAMVLEGKLLNSIYRSTGEH 112 (171)
T ss_dssp HHHHHTTSCCCCSS-SS-SEEEEEEECSSCE----EEEEEECTTCB--C-CEECCTTCEEEEEEEESEEEEEEEEECSSS
T ss_pred CHHHHhhcccCCCC-Cc-EEEEEEecCCCeE----EEEEEECCCCC--c-ccccCCCceEEEEEEeeeEEEEEeecCCCc
Confidence 34448888742111 11 2577777654332 34445555543 2 44666664 555599999976431
Q ss_pred ---ceeeeecCCcEEEEcceeEEEEECCCCCeeEEEEEEcCC
Q 011768 188 ---CGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGT 226 (478)
Q Consensus 188 ---fG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~~~~ 226 (478)
.+...+.+||..+.|.+-.+||.-+.. .....+=+|+.
T Consensus 113 ~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~-~~aVSlHvY~p 153 (171)
T 3eqe_A 113 AELSNSYFVHEGECLISTKGLIHKMSNPTS-ERMVSLHVYSP 153 (171)
T ss_dssp EEEEEEEEEETTCEEEECTTCEEEEECCSS-SCEEEEEEEES
T ss_pred eeecceEEeCCCcEEEeCCCCEEEEECCCC-CCEEEEEEeCC
Confidence 146778999999999999999976432 34555556643
No 153
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=21.31 E-value=55 Score=32.61 Aligned_cols=23 Identities=22% Similarity=0.531 Sum_probs=20.2
Q ss_pred eeeecCCcEEEEcceeEEEEECC
Q 011768 190 KLEVSPGEIAVLPQGFRFAVSLP 212 (478)
Q Consensus 190 ~L~v~pGd~vVIPRGi~frv~l~ 212 (478)
...++|||+++||+|.-+.+.-.
T Consensus 219 ~~~L~pGD~LyiP~gwwH~v~s~ 241 (342)
T 1vrb_A 219 IVNLTPGTMLYLPRGLWHSTKSD 241 (342)
T ss_dssp EEEECTTCEEEECTTCEEEEECS
T ss_pred EEEECCCcEEEeCCCccEEEEEC
Confidence 45689999999999999999864
No 154
>3mlq_E Transcription-repair coupling factor; tudor, transferase-transcription complex; 2.91A {Thermus thermophilus}
Probab=21.22 E-value=78 Score=24.91 Aligned_cols=16 Identities=31% Similarity=0.549 Sum_probs=3.9
Q ss_pred CCCEEEEEEeCcEEEE
Q 011768 170 DGDFLVVPQKGRLWIA 185 (478)
Q Consensus 170 DGD~Li~pq~G~l~l~ 185 (478)
-||.++.+..|-++++
T Consensus 5 ~GD~VVh~~hGiG~~~ 20 (71)
T 3mlq_E 5 PGDYLIHPEHGVGQYL 20 (71)
T ss_dssp -----------CEEEE
T ss_pred CCCEEEECCCeeEEEe
Confidence 4899999999998874
No 155
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=21.15 E-value=59 Score=26.18 Aligned_cols=22 Identities=27% Similarity=0.199 Sum_probs=17.2
Q ss_pred CCCCEEEEEEeCcEEEEeecee
Q 011768 169 ADGDFLVVPQKGRLWIATECGK 190 (478)
Q Consensus 169 aDGD~Li~pq~G~l~l~TEfG~ 190 (478)
..++.++|+.+|.+++..+-|.
T Consensus 56 ~~~~~~y~i~~G~v~~~~~~g~ 77 (134)
T 2d93_A 56 QELDSWYVILNGTVEISHPDGK 77 (134)
T ss_dssp CEECEEEECCBSCEEEECSSSC
T ss_pred CCCCeEEEEEeCEEEEEcCCCc
Confidence 3467899999999999865554
No 156
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=20.62 E-value=79 Score=32.34 Aligned_cols=32 Identities=22% Similarity=0.296 Sum_probs=26.9
Q ss_pred ceeeeecCCcEEEEcceeEEEEECCCCCeeEEEEEEcC
Q 011768 188 CGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 225 (478)
Q Consensus 188 fG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~~~ 225 (478)
+=.+.++|||.+.||.|+.+.+- +|.++|+-.
T Consensus 239 Ln~v~l~pGd~~fipAG~~HAy~------~G~~~Eima 270 (394)
T 2wfp_A 239 LNVVKLNPGEAMFLFAETPHAYL------QGVALEVMA 270 (394)
T ss_dssp EEEEEECTTCEEEECTTCCEEEE------EEEEEEEEC
T ss_pred heEEECCCCCEEEcCCCCceEcC------CCcEEEEec
Confidence 34677999999999999999883 578999875
Done!