Your job contains 1 sequence.
>011769
MAVNQFIGGRSCGITGTSFQRRAINKMGKAFPIYSMVIAPPNCSFGVINRAKNGFNPAIM
CCGSVSDQHASDYITINPSGVGESESRKSAATSQSCVQNVQLDLIMLSLPAIAGQAIEPM
AQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVATSFVAEDISRSSSKDSTS
DSSCPNVSYNGCDESTDRKLLPSVSTALVLALTIGILEALAMYFGSGLFLDIMGISSASS
MRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCLGLGNFSAVFMFPMLMYYF
KLGVTGAAISTVGSQYMVTLLMIWYLNKRTILSIPNMKNLHFGDYLRSGGYLLGRTLAAV
MTITLSTSIAARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIASSFAKGDYNTVKE
ITHFALKTGLFTGVTLAVILGASFNYLATLFTSDTQVLGIVRSGLLVRVYLLLVCLRL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011769
(478 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2121783 - symbol:AT4G38380 species:3702 "Arabi... 1096 5.3e-111 1
TAIR|locus:2057135 - symbol:AT2G38330 "AT2G38330" species... 781 1.3e-77 1
TAIR|locus:2008236 - symbol:AT1G51340 species:3702 "Arabi... 571 1.2e-71 2
TAIR|locus:2077477 - symbol:FRD3 "FERRIC REDUCTASE DEFECT... 566 9.8e-70 2
TAIR|locus:2050140 - symbol:AT2G21340 species:3702 "Arabi... 163 1.1e-13 2
UNIPROTKB|P28303 - symbol:dinF "DinF MATE Transporter" sp... 167 8.0e-11 2
TAIR|locus:2120267 - symbol:EDS5 "AT4G39030" species:3702... 128 2.6e-09 2
TIGR_CMR|CPS_2888 - symbol:CPS_2888 "MATE efflux family p... 158 6.1e-08 2
TIGR_CMR|BA_3296 - symbol:BA_3296 "MATE efflux family pro... 145 1.7e-07 2
UNIPROTKB|Q4KFD2 - symbol:pmpM "Multidrug resistance prot... 113 2.5e-07 2
UNIPROTKB|P76352 - symbol:yeeO "YeeO MATE transporter" sp... 135 8.9e-06 1
UNIPROTKB|Q8EIX5 - symbol:SO_0702 "Multidrug and toxin ef... 124 4.1e-05 2
TIGR_CMR|SO_0702 - symbol:SO_0702 "MATE efflux family pro... 124 4.1e-05 2
TIGR_CMR|CHY_1592 - symbol:CHY_1592 "MATE efflux family p... 102 4.5e-05 2
UNIPROTKB|Q722U5 - symbol:LMOf2365_0634 "Putative membran... 127 6.0e-05 2
UNIPROTKB|Q9KRU4 - symbol:norM "Multidrug resistance prot... 126 7.7e-05 1
TIGR_CMR|VC_1540 - symbol:VC_1540 "multidrug resistance p... 126 7.7e-05 1
TIGR_CMR|SO_2295 - symbol:SO_2295 "MATE efflux family pro... 122 0.00021 1
UNIPROTKB|Q48DJ8 - symbol:dinF "DNA-damage-inducible prot... 120 0.00034 1
TAIR|locus:2206960 - symbol:AT1G33110 "AT1G33110" species... 98 0.00054 2
UNIPROTKB|Q9KU73 - symbol:VC0650 "Putative uncharacterize... 111 0.00066 2
TIGR_CMR|VC_0650 - symbol:VC_0650 "conserved hypothetical... 111 0.00066 2
UNIPROTKB|Q9KVQ1 - symbol:VC_0090 "DNA-damage-inducible p... 109 0.00073 2
TIGR_CMR|VC_0090 - symbol:VC_0090 "DNA-damage-inducible p... 109 0.00073 2
TIGR_CMR|BA_1402 - symbol:BA_1402 "MATE efflux family pro... 108 0.00073 2
UNIPROTKB|Q8E8P4 - symbol:dinF "DNA damage-inducible mult... 117 0.00075 1
TIGR_CMR|SO_4617 - symbol:SO_4617 "DNA-damage-inducible p... 117 0.00075 1
UNIPROTKB|E1BR23 - symbol:SLC47A2 "Uncharacterized protei... 90 0.00091 2
>TAIR|locus:2121783 [details] [associations]
symbol:AT4G38380 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006855 "drug
transmembrane transport" evidence=IEA] [GO:0015238 "drug
transmembrane transporter activity" evidence=IEA] [GO:0015297
"antiporter activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] InterPro:IPR002528
Pfam:PF01554 GO:GO:0016021 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0031969 GO:GO:0015238 GO:GO:0015297
TIGRFAMs:TIGR00797 EMBL:AL161593 EMBL:AL035539 IPI:IPI00528910
PIR:T05666 RefSeq:NP_195551.5 UniGene:At.65831
ProteinModelPortal:Q9SVE7 PRIDE:Q9SVE7 EnsemblPlants:AT4G38380.1
GeneID:829995 KEGG:ath:AT4G38380 TAIR:At4g38380 OMA:EMFIPAR
Genevestigator:Q9SVE7 Uniprot:Q9SVE7
Length = 560
Score = 1096 (390.9 bits), Expect = 5.3e-111, P = 5.3e-111
Identities = 234/420 (55%), Positives = 299/420 (71%)
Query: 41 PNCSFGVINRAKNGFNPAIMCCGSVSDQHASDYITINPSGVGESESRKSAATSQSCVQNV 100
PN F + R K+ NP CG V D + S + + T + ++
Sbjct: 53 PNPMFPFVTRRKSQTNPD---CGVVKLGEEDD----SCSSLDKLPEVNGVHTGVARPVDI 105
Query: 101 QLDLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLS 160
+ +L+MLSLPAIAGQAI+P+ LMETAYIGRLG +EL SAGVS +IFN +SK+FNIPLLS
Sbjct: 106 KRELVMLSLPAIAGQAIDPLTLLMETAYIGRLGSVELGSAGVSMAIFNTISKLFNIPLLS 165
Query: 161 VATSFVAEXXXXXXXXXXXXXXXCPNVSYNGCDESTDRKLLPSVSTALVLALTIGILEAL 220
VATSFVAE ++ G E RK L SVSTALVLA+ IGI EAL
Sbjct: 166 VATSFVAEDIAKIAAQDLASEDSQSDIPSQGLPE---RKQLSSVSTALVLAIGIGIFEAL 222
Query: 221 AMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVF 280
A+ SG FL +MGI S S M IPA++FL LRA+GAPA V+SLA+QGIFRGFKDT+TPV+
Sbjct: 223 ALSLASGPFLRLMGIQSMSEMFIPARQFLVLRALGAPAYVVSLALQGIFRGFKDTKTPVY 282
Query: 281 CLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTILSIPNMKNL 340
CLG+GNF AVF+FP+ +Y F++GV GAAIS+V SQY V +LM+ LNKR IL P + +L
Sbjct: 283 CLGIGNFLAVFLFPLFIYKFRMGVAGAAISSVISQYTVAILMLILLNKRVILLPPKIGSL 342
Query: 341 HFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVWLSVSMLADAQAA 400
FGDYL+SGG++LGRTL+ ++T+T++TS+AARQG AMAAHQIC+QVWL+VS+L DA A+
Sbjct: 343 KFGDYLKSGGFVLGRTLSVLVTMTVATSMAARQGVFAMAAHQICMQVWLAVSLLTDALAS 402
Query: 401 SGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATLFTSDTQVLGI 460
SGQALIASS +K D+ VKE+T F LK G+ TG+ LA++LG SF+ +A LF+ D +VL I
Sbjct: 403 SGQALIASSASKRDFEGVKEVTTFVLKIGVVTGIALAIVLGMSFSSIAGLFSKDPEVLRI 462
>TAIR|locus:2057135 [details] [associations]
symbol:AT2G38330 "AT2G38330" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006855 "drug
transmembrane transport" evidence=IEA] [GO:0015238 "drug
transmembrane transporter activity" evidence=IEA] [GO:0015297
"antiporter activity" evidence=IEA;ISS] [GO:0016020 "membrane"
evidence=IEA;ISS] [GO:0055085 "transmembrane transport"
evidence=IEA] InterPro:IPR002528 Pfam:PF01554 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0031969 GO:GO:0015238
GO:GO:0015297 eggNOG:COG0534 TIGRFAMs:TIGR00797 EMBL:AC004683
UniGene:At.37311 UniGene:At.74107 HOGENOM:HOG000253153
EMBL:BT004001 EMBL:BT005521 IPI:IPI00529504 PIR:T02512
RefSeq:NP_181367.2 ProteinModelPortal:Q84K71 IntAct:Q84K71
PaxDb:Q84K71 PRIDE:Q84K71 EnsemblPlants:AT2G38330.1 GeneID:818413
KEGG:ath:AT2G38330 TAIR:At2g38330 InParanoid:Q84K71 OMA:FAYDGVF
PhylomeDB:Q84K71 ProtClustDB:CLSN2918200 Genevestigator:Q84K71
Uniprot:Q84K71
Length = 521
Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
Identities = 156/364 (42%), Positives = 241/364 (66%)
Query: 97 VQNVQLDLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNI 156
+ + ++++ ++LPA A +P+ L++TA++G +G ELA+ GVS S+FN++SK+FN+
Sbjct: 73 IGKIGMEIMSIALPAALALAADPITSLVDTAFVGHIGSAELAAVGVSVSVFNLVSKLFNV 132
Query: 157 PLLSVATSFVAEXXXXXXXXXXXXXXXCPNVSYNGCDESTDRKLLPSVSTALVLALTIGI 216
PLL+V TSFVAE N E T +K+LPSVST+LVLA +GI
Sbjct: 133 PLLNVTTSFVAEEQAIAAKDD------------NDSIE-TSKKVLPSVSTSLVLAAGVGI 179
Query: 217 LEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTR 276
EA+A+ GS +D+M I S MRIPA++FL LRA GAP +V++LA QG FRGFKDT
Sbjct: 180 AEAIALSLGSDFLMDVMAIPFDSPMRIPAEQFLRLRAYGAPPIVVALAAQGAFRGFKDTT 239
Query: 277 TPVFCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTILSIPN 336
TP++ + GN + P+L++ G++GAA +TV S+Y++ +++W LN+ +L P
Sbjct: 240 TPLYAVVAGNVLNAVLDPILIFVLGFGISGAAAATVISEYLIAFILLWKLNENVVLLSPQ 299
Query: 337 MKNLHFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVWLSVSMLAD 396
+K YL+SGG L+GRT+A ++ TL+TS+AA+ G MA HQI L++WL+VS+L D
Sbjct: 300 IKVGRANQYLKSGGLLIGRTVALLVPFTLATSLAAQNGPTQMAGHQIVLEIWLAVSLLTD 359
Query: 397 AQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATLFTSDTQ 456
A A + Q+L+A+++++G+Y +E+ L+ GL TG LA +L +F ++LFT+D++
Sbjct: 360 ALAIAAQSLLATTYSQGEYKQAREVLFGVLQVGLATGTGLAAVLFITFEPFSSLFTTDSE 419
Query: 457 VLGI 460
VL I
Sbjct: 420 VLKI 423
>TAIR|locus:2008236 [details] [associations]
symbol:AT1G51340 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006855 "drug
transmembrane transport" evidence=IEA] [GO:0015238 "drug
transmembrane transporter activity" evidence=IEA] [GO:0015297
"antiporter activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0019761 "glucosinolate biosynthetic process" evidence=RCA]
InterPro:IPR002528 Pfam:PF01554 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0015238 GO:GO:0015297
eggNOG:COG0534 TIGRFAMs:TIGR00797 GO:GO:0005216 EMBL:AC006085
OMA:GAEMRNS HOGENOM:HOG000253153 EMBL:BX818238 IPI:IPI00518906
IPI:IPI00524609 PIR:D96551 RefSeq:NP_564588.2 RefSeq:NP_974000.1
UniGene:At.26628 ProteinModelPortal:Q9SYD6 PaxDb:Q9SYD6
PRIDE:Q9SYD6 EnsemblPlants:AT1G51340.2 GeneID:841557
KEGG:ath:AT1G51340 TAIR:At1g51340 InParanoid:Q9SYD6
PhylomeDB:Q9SYD6 ProtClustDB:CLSN2918502 Genevestigator:Q9SYD6
Uniprot:Q9SYD6
Length = 515
Score = 571 (206.1 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 114/261 (43%), Positives = 175/261 (67%)
Query: 198 RKLLPSVSTALVLALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAP 257
++ +PS S+AL++ +G+ +A+ + + L MG+ S M P+QR+LSLR++GAP
Sbjct: 161 KRNIPSASSALIIGGVLGLFQAVFLISAAKPLLSFMGVKHDSPMMRPSQRYLSLRSLGAP 220
Query: 258 AVVLSLAIQGIFRGFKDTRTPVFCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYM 317
AV+LSLA QG+FRGFKDT TP+F +G+ + + + P+ ++ F+LGVTGAA + V SQY+
Sbjct: 221 AVLLSLAAQGVFRGFKDTTTPLFATVIGDVTNIILDPIFIFVFRLGVTGAATAHVISQYL 280
Query: 318 VTLLMIWYLNKRTILSIPNMKNLHFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALA 377
+ +++W L + + + K+L F ++++G LL R +A +TLS S+AAR+G+ +
Sbjct: 281 MCGILLWKLMGQVDIFNMSTKHLQFCRFMKNGFLLLMRVIAVTFCVTLSASLAAREGSTS 340
Query: 378 MAAHQICLQVWLSVSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLA 437
MAA Q+CLQVWL+ S+LAD A +GQA++AS+FAK DY L+ GL G LA
Sbjct: 341 MAAFQVCLQVWLATSLLADGYAVAGQAILASAFAKKDYKRAAATASRVLQLGLVLGFVLA 400
Query: 438 VILGASFNYLATLFTSDTQVL 458
VILGA ++ A +FT D +VL
Sbjct: 401 VILGAGLHFGARVFTKDDKVL 421
Score = 172 (65.6 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 37/102 (36%), Positives = 60/102 (58%)
Query: 102 LDLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSV 161
L++ ++LPA +P+A L++TA+IG++GP+ELA+ GVS ++FN +S++ PL+S+
Sbjct: 34 LEIARIALPAALALTADPIASLVDTAFIGQIGPVELAAVGVSIALFNQVSRIAIFPLVSI 93
Query: 162 ATSFVAEXXX-XXXXXXXXXXXXCPNVSYNGCDESTDRKLLP 202
TSFVAE C + N E T +L+P
Sbjct: 94 TTSFVAEEDACSSQQDTVRDHKECIEIGINNPTEETI-ELIP 134
>TAIR|locus:2077477 [details] [associations]
symbol:FRD3 "FERRIC REDUCTASE DEFECTIVE 3" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0006855 "drug transmembrane transport"
evidence=IEA] [GO:0015238 "drug transmembrane transporter activity"
evidence=IEA] [GO:0015297 "antiporter activity" evidence=IEA;ISS]
[GO:0016020 "membrane" evidence=IEA;ISS] [GO:0055085 "transmembrane
transport" evidence=IEA] [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006879 "cellular iron ion homeostasis"
evidence=IMP] [GO:0015137 "citrate transmembrane transporter
activity" evidence=IDA] [GO:0071281 "cellular response to iron ion"
evidence=IEP] [GO:0071369 "cellular response to ethylene stimulus"
evidence=IEP] [GO:0071732 "cellular response to nitric oxide"
evidence=IEP] [GO:0006826 "iron ion transport" evidence=RCA]
[GO:0010106 "cellular response to iron ion starvation"
evidence=RCA] [GO:0010167 "response to nitrate" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR002528 Pfam:PF01554
GO:GO:0016021 GO:GO:0005886 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0071281 GO:GO:0006879 GO:GO:0015238 GO:GO:0071732
GO:GO:0015297 EMBL:AC013483 eggNOG:COG0534 TIGRFAMs:TIGR00797
GO:GO:0005216 GO:GO:0071369 EMBL:AC074395 EMBL:AF448231
EMBL:AY056439 EMBL:AY057517 EMBL:AY133652 EMBL:BT006370
IPI:IPI00531718 RefSeq:NP_001154595.1 RefSeq:NP_187461.1
UniGene:At.17333 ProteinModelPortal:Q9SFB0 IntAct:Q9SFB0
STRING:Q9SFB0 PRIDE:Q9SFB0 EnsemblPlants:AT3G08040.1
EnsemblPlants:AT3G08040.2 GeneID:819995 KEGG:ath:AT3G08040
TAIR:At3g08040 HOGENOM:HOG000253153 InParanoid:Q9SFB0 OMA:ARSARHY
PhylomeDB:Q9SFB0 ProtClustDB:CLSN2915580 Genevestigator:Q9SFB0
GO:GO:0015137 Uniprot:Q9SFB0
Length = 526
Score = 566 (204.3 bits), Expect = 9.8e-70, Sum P(2) = 9.8e-70
Identities = 115/276 (41%), Positives = 180/276 (65%)
Query: 185 PNVSYNGCDEST--DRKLLPSVSTALVLALTIGILEALAMYFGSGLFLDIMGISSASSMR 242
P+ N ++S +++ + + STA++L L +G+++A+ + F S L L +MG+ S M
Sbjct: 150 PDTKSNSGNKSNKKEKRTIRTASTAMILGLILGLVQAIFLIFSSKLLLGVMGVKPNSPML 209
Query: 243 IPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCLGLGNFSAVFMFPMLMYYFKL 302
PA ++LS+RA+GAPA++LSLA+QGIFRGFKDT+TP+F + + + + P+ ++ +L
Sbjct: 210 SPAHKYLSIRALGAPALLLSLAMQGIFRGFKDTKTPLFATVVADVINIVLDPIFIFVLRL 269
Query: 303 GVTGAAISTVGSQYMVTLLMIWYLNKRTILSIPNMKNLHFGDYLRSGGYLLGRTLAAVMT 362
G+ GAAI+ V SQY +TL++ +L K+ L PN +L FG +L++G LL RT+A
Sbjct: 270 GIIGAAIAHVISQYFMTLILFVFLAKKVNLIPPNFGDLQFGRFLKNGLLLLARTIAVTFC 329
Query: 363 ITLSTSIAARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIASSFAKGDYNTVKEIT 422
TL+ ++AAR G MAA QICLQVWL+ S+L D A +GQA++A SFA+ DYN V +
Sbjct: 330 QTLAAAMAARLGTTPMAAFQICLQVWLTSSLLNDGLAVAGQAILACSFAEKDYNKVTAVA 389
Query: 423 HFALKTGLFTGVTLAVILGASFNYLATLFTSDTQVL 458
L+ G G+ L+V +G + A +F+ D V+
Sbjct: 390 SRVLQMGFVLGLGLSVFVGLGLYFGAGVFSKDPAVI 425
Score = 159 (61.0 bits), Expect = 9.8e-70, Sum P(2) = 9.8e-70
Identities = 30/66 (45%), Positives = 49/66 (74%)
Query: 103 DLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVA 162
+++ ++ PA A +P+A L++TA++GRLG ++LA+ GVS +IFN S++ PL+S+
Sbjct: 36 EILGIAFPAALALAADPIASLIDTAFVGRLGAVQLAAVGVSIAIFNQASRITIFPLVSLT 95
Query: 163 TSFVAE 168
TSFVAE
Sbjct: 96 TSFVAE 101
Score = 56 (24.8 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 209 VLALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGI 268
VL L + + L +YFG+G+F + ++ IP F+ A P L+ + G+
Sbjct: 398 VLGLGLSVFVGLGLYFGAGVFSKDPAVIHLMAIGIP---FI---AATQPINSLAFVLDGV 451
Query: 269 FRGFKD 274
G D
Sbjct: 452 NFGASD 457
>TAIR|locus:2050140 [details] [associations]
symbol:AT2G21340 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006855 "drug
transmembrane transport" evidence=IEA] [GO:0015238 "drug
transmembrane transporter activity" evidence=IEA] [GO:0015297
"antiporter activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] InterPro:IPR002528 Pfam:PF01554
GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC006841
GO:GO:0009941 GO:GO:0031969 GO:GO:0015238 GO:GO:0015297
eggNOG:COG0534 TIGRFAMs:TIGR00797 HOGENOM:HOG000029977
EMBL:AY062577 EMBL:AY128797 EMBL:AY086052 IPI:IPI00522746
PIR:B84600 RefSeq:NP_565509.4 UniGene:At.27297
ProteinModelPortal:Q8W4G3 PaxDb:Q8W4G3 PRIDE:Q8W4G3
EnsemblPlants:AT2G21340.1 GeneID:816673 KEGG:ath:AT2G21340
GeneFarm:3161 TAIR:At2g21340 InParanoid:Q9SJU3 OMA:WAMGFLR
PhylomeDB:Q8W4G3 ProtClustDB:CLSN2927366 Genevestigator:Q8W4G3
Uniprot:Q8W4G3
Length = 559
Score = 163 (62.4 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 62/256 (24%), Positives = 116/256 (45%)
Query: 204 VSTALVLALTIGI-LEALAMYFGSGLFLDIMGISSASSMRIPA-QRFLSLRAIGAPAVVL 261
+S L + L G+ + L FGS G+ +A +PA +++ +R + PAV++
Sbjct: 196 ISILLFIGLACGVTMMVLTRLFGSWALTAFTGVKNADI--VPAANKYVQIRGLAWPAVLI 253
Query: 262 SLAIQGIFRGFKDTRTPVFCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLL 321
Q G KD+ P+ L + + +L + G+ GAA +T+ SQ + +
Sbjct: 254 GWVAQSASLGMKDSWGPLKALAVASAINGVGDVVLCTFLGYGIAGAAWATMVSQVVAAYM 313
Query: 322 MIWYLNKR--TILS--IPNMKNLH--FGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGA 375
M+ LNK+ + S +P+ L FG L + ++ ++ V+ TL A G
Sbjct: 314 MMDALNKKGYSAFSFCVPSPSELLTIFG--LAAPVFIT--MMSKVLFYTLLVYFATSMGT 369
Query: 376 LAMAAHQICLQVWLSVSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVT 435
+AAHQ+ LQ++ ++ + + + Q+ + + N K LK+ + G T
Sbjct: 370 NIIAAHQVMLQIYTMSTVWGEPLSQTAQSFMPELLFGINRNLPK--ARVLLKSLVIIGAT 427
Query: 436 LAVILGASFNYLATLF 451
L +++G + LF
Sbjct: 428 LGIVVGTIGTAVPWLF 443
Score = 91 (37.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 34/104 (32%), Positives = 52/104 (50%)
Query: 63 GSVSD-QHASDYITINPSGV-GESESRKSAATSQSCVQNVQLDLIMLSLPAIAGQAIEPM 120
GS+S+ Q + +I+P V E E K + + +++M + PA P+
Sbjct: 76 GSISELQGDAANGSISPVEVEAEVEEVKVDDLATQSIWGQMKEIVMFTGPAAGLWLCGPL 135
Query: 121 AQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVATS 164
L++TA IG+ LELA+ G +T I + L F LSVATS
Sbjct: 136 MSLIDTAVIGQGSSLELAALGPATVICDYLCYTFMF--LSVATS 177
>UNIPROTKB|P28303 [details] [associations]
symbol:dinF "DinF MATE Transporter" species:83333
"Escherichia coli K-12" [GO:0015297 "antiporter activity"
evidence=IEA] [GO:0015238 "drug transmembrane transporter activity"
evidence=IEA] [GO:0006855 "drug transmembrane transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR002528 Pfam:PF01554
GO:GO:0016021 GO:GO:0005886 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0015238
EMBL:U00006 GO:GO:0015297 eggNOG:COG0534 KO:K03327
TIGRFAMs:TIGR00797 EMBL:L02362 PIR:C65212 RefSeq:NP_418468.3
RefSeq:YP_492187.1 ProteinModelPortal:P28303 TCDB:2.A.66.1.4
EnsemblBacteria:EBESCT00000004175 EnsemblBacteria:EBESCT00000014884
GeneID:12932728 GeneID:948554 KEGG:ecj:Y75_p3931 KEGG:eco:b4044
PATRIC:32123625 EchoBASE:EB1454 EcoGene:EG11491
HOGENOM:HOG000253154 OMA:GAEMRNS ProtClustDB:PRK10367
BioCyc:EcoCyc:DINF-MONOMER BioCyc:ECOL316407:JW4004-MONOMER
Genevestigator:P28303 Uniprot:P28303
Length = 459
Score = 167 (63.8 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 65/256 (25%), Positives = 120/256 (46%)
Query: 208 LVLALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQG 267
L+LAL G L AL L L I+G S A + A+RFL +R + APA + +L + G
Sbjct: 111 LLLALGAGALIALLRTPIIDLALHIVGGSEAVLEQ--ARRFLEIRWLSAPASLANLVLLG 168
Query: 268 IFRGFKDTRTPVFCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQY---MVTLLMIW 324
G + R PV L +GN + + L+ + V GAA++TV ++Y ++ LLM+
Sbjct: 169 WLLGVQYARAPVILLVVGNILNIVLDVWLVMGLHMNVQGAALATVIAEYATLLIGLLMVR 228
Query: 325 YLNKRTILSIPNMKNLHFGDYLRSGGY---LLGRTLAAVMTITLSTSIAARQGALAMAAH 381
+ K +S +K G++ R ++ R+L + T + AR G+ +A +
Sbjct: 229 KILKLRGISGEMLKTAWRGNFRRLLALNRDIMLRSLLLQLCFGAITVLGARLGSDIIAVN 288
Query: 382 QICLQVWLSVSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILG 441
+ + + + D A + +A ++ D + + ++ A + + +V+
Sbjct: 289 AVLMTLLTFTAYALDGFAYAVEAHSGQAYGARDGSQLLDVWRAACRQSGIVALLFSVVYL 348
Query: 442 ASFNYLATLFTSDTQV 457
+ ++ L TS TQ+
Sbjct: 349 LAGEHIIALLTSLTQI 364
Score = 56 (24.8 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 107 LSLPAIAGQAIEPMAQLMETAYIGRL-GPLELASAGVSTSIFNIL 150
L+LP I P+ L++TA IG L P+ L V + + L
Sbjct: 32 LALPMIFSNITVPLLGLVDTAVIGHLDSPVYLGGVAVGATATSFL 76
Score = 39 (18.8 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 6 FIGGRSCGITGTSF 19
++GG + G T TSF
Sbjct: 62 YLGGVAVGATATSF 75
>TAIR|locus:2120267 [details] [associations]
symbol:EDS5 "AT4G39030" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006855 "drug
transmembrane transport" evidence=IEA] [GO:0015238 "drug
transmembrane transporter activity" evidence=IEA;ISS] [GO:0015297
"antiporter activity" evidence=IEA;ISS] [GO:0016020 "membrane"
evidence=ISS] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0009697 "salicylic acid biosynthetic process" evidence=RCA;IMP]
[GO:0006952 "defense response" evidence=TAS] [GO:0009624 "response
to nematode" evidence=IEP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0009536 "plastid" evidence=IDA] [GO:0031348
"negative regulation of defense response" evidence=RCA;IMP]
[GO:0042742 "defense response to bacterium" evidence=RCA;IMP]
[GO:0000096 "sulfur amino acid metabolic process" evidence=RCA]
[GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006520 "cellular
amino acid metabolic process" evidence=RCA] [GO:0006546 "glycine
catabolic process" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006636 "unsaturated fatty acid
biosynthetic process" evidence=RCA] [GO:0006733 "oxidoreduction
coenzyme metabolic process" evidence=RCA] [GO:0006766 "vitamin
metabolic process" evidence=RCA] [GO:0008652 "cellular amino acid
biosynthetic process" evidence=RCA] [GO:0009072 "aromatic amino
acid family metabolic process" evidence=RCA] [GO:0009106 "lipoate
metabolic process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic
process" evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009684 "indoleacetic acid biosynthetic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009863
"salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0010310 "regulation of hydrogen peroxide metabolic process"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
[GO:0019748 "secondary metabolic process" evidence=RCA] [GO:0034976
"response to endoplasmic reticulum stress" evidence=RCA]
[GO:0043900 "regulation of multi-organism process" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045087 "innate immune response" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR002528
Pfam:PF01554 GO:GO:0016021 GO:GO:0005739 GO:GO:0009536
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0031348 GO:GO:0042742
GO:GO:0009624 GO:GO:0015238 GO:GO:0015297 eggNOG:COG0534
TIGRFAMs:TIGR00797 EMBL:AL035679 EMBL:AL161594 GO:GO:0009697
EMBL:AF416569 IPI:IPI00540268 RefSeq:NP_195614.2 UniGene:At.2846
UniGene:At.66625 ProteinModelPortal:Q945F0 STRING:Q945F0
TCDB:2.A.66.1.11 EnsemblPlants:AT4G39030.1 GeneID:830058
KEGG:ath:AT4G39030 TAIR:At4g39030 HOGENOM:HOG000029977
InParanoid:Q945F0 OMA:ELWKISA PhylomeDB:Q945F0
ProtClustDB:CLSN2915066 Genevestigator:Q945F0 GermOnline:AT4G39030
Uniprot:Q945F0
Length = 543
Score = 128 (50.1 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 54/255 (21%), Positives = 105/255 (41%)
Query: 204 VSTALVLALTIGILEAL-AMYFGSGLFLDIMGISSASSMRI-PA-QRFLSLRAIGAPAVV 260
+S L + L G++ L FG + + ++ I PA +++ +R + P ++
Sbjct: 179 ISVLLFIGLVCGLMMLLLTRLFGPWA---VTAFTRGKNIEIVPAANKYIQIRGLAWPFIL 235
Query: 261 LSLAIQGIFRGFKDTRTPVFCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTL 320
+ L Q G K++ P+ L +L + G+ GAA +T SQ +
Sbjct: 236 VGLVAQSASLGMKNSWGPLKALAAATIINGLGDTILCLFLGQGIAGAAWATTASQIVSAY 295
Query: 321 LMIWYLNKRTI----LSIPNMKNLHFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGAL 376
+M+ LNK +IP+ + L L + ++ + + + A G
Sbjct: 296 MMMDSLNKEGYNAYSFAIPSPQELWKISALAAPVFI--SIFSKIAFYSFIIYCATSMGTH 353
Query: 377 AMAAHQICLQVWLSVSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTL 436
+AAHQ+ Q + ++ + + + Q+ + + N K T LK+ + G TL
Sbjct: 354 VLAAHQVMAQTYRMCNVWGEPLSQTAQSFMPEMLYGANRNLPKART--LLKSLMIIGATL 411
Query: 437 AVILGASFNYLATLF 451
++LG + LF
Sbjct: 412 GLVLGVIGTAVPGLF 426
Score = 86 (35.3 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 83 ESESRKSAATSQSCVQNVQLDLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGV 142
E E + QS + ++ +++ + PA+ P+ L++T IG+ +ELA+ G
Sbjct: 82 EEEKERGDLVKQSIWEQMK-EIVKFTGPAMGMWICGPLMSLIDTVVIGQGSSIELAALGP 140
Query: 143 STSIFNILSKVFNIPLLSVATS 164
T + + +S VF LSVATS
Sbjct: 141 GTVLCDHMSYVFMF--LSVATS 160
>TIGR_CMR|CPS_2888 [details] [associations]
symbol:CPS_2888 "MATE efflux family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006855 "drug
transmembrane transport" evidence=ISS] [GO:0016020 "membrane"
evidence=ISS] [GO:0042493 "response to drug" evidence=ISS]
InterPro:IPR002528 Pfam:PF01554 GO:GO:0016020 GO:GO:0015238
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0015297
eggNOG:COG0534 TIGRFAMs:TIGR00797 RefSeq:YP_269593.1 STRING:Q480C6
DNASU:3522714 GeneID:3522714 KEGG:cps:CPS_2888 PATRIC:21468801
HOGENOM:HOG000272443 OMA:FISQNFG ProtClustDB:CLSK758999
BioCyc:CPSY167879:GI48-2942-MONOMER Uniprot:Q480C6
Length = 462
Score = 158 (60.7 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 78/363 (21%), Positives = 153/363 (42%)
Query: 107 LSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPL-LSVATSF 165
+++P I G + L++T ++G LG LA+ + F + V ++ + L + TS
Sbjct: 28 MTIPMIYGMVLLMTFNLIDTFFVGLLGTQPLAAISFT---FPVTFTVISLTIGLGIGTSA 84
Query: 166 VAEXXXXXXXXXXXXXXXCPNVSYNGCDESTDRKLLPSVSTALVLA-LTIGILEALAMYF 224
V Y G ++ K + + AL LA + + L + +
Sbjct: 85 VI-------------------AKYLGKKDTKSAK--NAATAALYLAAIIVACLSTVGYFI 123
Query: 225 GSGLFLDIMGISSASSMRIPA-QRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCLG 283
LF ++G A +P ++ + IG+ ++ + + R DT+TP +G
Sbjct: 124 TDPLFT-LLG---AQPSLLPLIHEYMDIWYIGSVCLIGPMIGNAVLRASGDTKTPSMIMG 179
Query: 284 LGNFSAVFMFPMLMYYF----KLGVTGAAISTVGSQYMVTLLMIWYLNKRTILSIPNM-- 337
+ P+ ++ F +G+ GAAI+T+ S +++ L K+ L M
Sbjct: 180 SAGLINAILDPIFIFGFGPIPAMGIQGAAIATLISWIFGLGFVLYILTKKHDLIHTTMLP 239
Query: 338 -KNLHFG--DYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVWLSVSML 394
K L D L+ G + + + T+I A G A+AA + ++ ++
Sbjct: 240 IKELIVACKDILKIGLPAASANMLTPLAAAIMTAIVASYGEAAVAAFGVGSRLESIACLI 299
Query: 395 ADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATLFTSD 454
A + + I+ +F G + V+ A+K L + + +IL N++A++FT +
Sbjct: 300 VLALSMTLPPFISQNFGAGQLHRVETAYKVAIKFILVWQIVIYIILALCANWIASVFTKE 359
Query: 455 TQV 457
T+V
Sbjct: 360 TEV 362
Score = 38 (18.4 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 429 GLFTGVTLAVILGASFNYLATLFTSD 454
GLF G L +L A +Y LF+ +
Sbjct: 426 GLFAGALLGNVLMAMISY--RLFSKE 449
>TIGR_CMR|BA_3296 [details] [associations]
symbol:BA_3296 "MATE efflux family protein" species:198094
"Bacillus anthracis str. Ames" [GO:0006855 "drug transmembrane
transport" evidence=ISS] [GO:0042493 "response to drug"
evidence=ISS] InterPro:IPR002528 Pfam:PF01554 GO:GO:0016020
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0015238
GO:GO:0015297 TIGRFAMs:TIGR00797 RefSeq:NP_845588.1
RefSeq:YP_019931.1 RefSeq:YP_029316.1 DNASU:1085089
EnsemblBacteria:EBBACT00000009851 EnsemblBacteria:EBBACT00000014594
EnsemblBacteria:EBBACT00000023204 GeneID:1085089 GeneID:2817572
GeneID:2847815 KEGG:ban:BA_3296 KEGG:bar:GBAA_3296 KEGG:bat:BAS3059
HOGENOM:HOG000072914 OMA:QPDRIVQ ProtClustDB:CLSK887369
BioCyc:BANT260799:GJAJ-3121-MONOMER
BioCyc:BANT261594:GJ7F-3225-MONOMER Uniprot:Q81NB5
Length = 469
Score = 145 (56.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 70/278 (25%), Positives = 119/278 (42%)
Query: 197 DRKLLPSVSTALVLALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQ-RFLSLRAIG 255
+ +L V T L IG++ A+ G+ L+IM + I + + I
Sbjct: 99 EERLKAIVGTTLTFTFIIGVILAIV---GNVFALNIMRLMGTPENIIDMSVHYARILFIS 155
Query: 256 APAVVLSLAIQGIFRGFKDTRTPVFCLGLGNFSAVFMFPMLMYYF----KLGVTGAAIST 311
P + L + RG D++TP + L + + + P+L++ + K+GV GAA ++
Sbjct: 156 MPVLFLYFSYTTFIRGTGDSKTPFYFLIVSTVLNIMLLPILIFGWVGIPKIGVYGAAYAS 215
Query: 312 VGSQYMVTLLMIWYLNKRTILSIPNMKNLHFGDYLRSGGYLLGRTL-----AAVMTITLS 366
V S + ++MI YL K+ + P + YLR LL L A++ I +S
Sbjct: 216 VISTIITFIVMIIYLKKK---NHPLQLDETVRKYLRMDWGLLKLLLRLGIPASINMILVS 272
Query: 367 TS-IAA-----RQGALAMAAHQICLQVWLSVSMLADAQAASGQALIASSFAKGDYNTVKE 420
S IA R G+ A AA+ + QV V M A + + A S +N ++E
Sbjct: 273 LSEIAVIAFVNRFGSDATAAYVVVNQVASYVQMPAVSLGITVSIFAAQSIGAKQFNRLQE 332
Query: 421 ITHFALKTG-LFTGVTLAVILGASFNYLATLFTSDTQV 457
+ + + G+ +A I S L+ TS +
Sbjct: 333 VIRAGIVMNYIIGGILIAFIYLFSREILSLFLTSSNTI 370
Score = 48 (22.0 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 106 MLSLPAIAGQAIEPMAQLMETAYIGR-LGPLELASAGVSTSIFNIL 150
M +P + ++ + QL +GR LG ELA+ +F +L
Sbjct: 30 MFLVPLLLSNILQSVGQLFGMVVVGRWLGVNELAAISAFFPLFFLL 75
>UNIPROTKB|Q4KFD2 [details] [associations]
symbol:pmpM "Multidrug resistance protein PmpM"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006811 "ion
transport" evidence=ISS] [GO:0015297 "antiporter activity"
evidence=ISS] InterPro:IPR002528 Pfam:PF01554 GO:GO:0016020
GO:GO:0006811 GO:GO:0015238 EMBL:CP000076 GO:GO:0015297
eggNOG:COG0534 KO:K03327 TIGRFAMs:TIGR00797 HOGENOM:HOG000038538
RefSeq:YP_259051.2 GeneID:3477623 KEGG:pfl:PFL_1932 PATRIC:19873107
ProtClustDB:CLSK866525 BioCyc:PFLU220664:GIX8-1942-MONOMER
Uniprot:Q4KFD2
Length = 471
Score = 113 (44.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 67/279 (24%), Positives = 115/279 (41%)
Query: 202 PSVSTALVLALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVL 261
P V AL LA+ GI AL + + L +M + + P +L A G PAV L
Sbjct: 103 PLVRQALWLAVVAGI-SALLILISAEPVLHLMNVDP--ELIKPCMGYLHGIASGLPAVAL 159
Query: 262 SLAIQGIFRGFKDTRTPVFCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLL 321
++ + G T P +GLG + + Y GV A+ VG + T +
Sbjct: 160 YYVLRCLSDGLGRT-VPSMVIGLGGLALNIPINYIFIYGHFGVP--AMGGVGCGW-ATAI 215
Query: 322 MIWYLNKRT---ILSIPNMKNLH-FGDYLRSGGYLLGRTLAAVMTITLS----TSIAA-- 371
++W + I P + + F + G ++GR L+ + I ++ +SI A
Sbjct: 216 VMWAMMLGMAGWIFWAPAYRKIQLFSRFDWPQGAMIGRLLSIGLPIGIAVFAESSIFAVI 275
Query: 372 -----RQGALAMAAHQICLQVWLSVSMLADAQAASGQALIASSFAKGDYNTVKEITHFAL 426
GA +A HQI L V + M+ + A + + + + + F+
Sbjct: 276 ALLIGSLGATVVAGHQIALNVSALMFMIPYSLAMAVTVRVGQALGRQQPRNAR----FSA 331
Query: 427 KTGLFTGVTLAVILGASFNY-----LATLFTSDTQVLGI 460
G+ T + A L AS + +AT++T+D V+ +
Sbjct: 332 GVGMATSLAYAC-LSASLMFFLREPIATIYTTDPMVIQV 369
Score = 81 (33.6 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 79 SGVGESESRKSAATSQSCVQNVQL-DLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLEL 137
+ V +S + + ATS+ +L DL++L+LP + Q ++ GR+GP +L
Sbjct: 2 NSVTDSPAATATATSRPARVGRELHDLLVLALPIMIAQVATTAMGFVDAVMAGRVGPRDL 61
Query: 138 ASAGVSTSIF 147
A+ + SI+
Sbjct: 62 AAVALGNSIW 71
>UNIPROTKB|P76352 [details] [associations]
symbol:yeeO "YeeO MATE transporter" species:83333
"Escherichia coli K-12" [GO:0015297 "antiporter activity"
evidence=IEA] [GO:0015238 "drug transmembrane transporter activity"
evidence=IEA] [GO:0006855 "drug transmembrane transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002528 Pfam:PF01554 GO:GO:0016021 GO:GO:0005886
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0015238 GO:GO:0015297 eggNOG:COG0534
TIGRFAMs:TIGR00797 PIR:B64963 RefSeq:NP_416491.2 RefSeq:YP_490230.1
ProteinModelPortal:P76352 SMR:P76352
EnsemblBacteria:EBESCT00000000101 EnsemblBacteria:EBESCT00000017686
GeneID:12930361 GeneID:946506 KEGG:ecj:Y75_p1948 KEGG:eco:b1985
PATRIC:32119301 EchoBASE:EB3164 EcoGene:EG13383
HOGENOM:HOG000056139 ProtClustDB:PRK10189
BioCyc:EcoCyc:YEEO-MONOMER BioCyc:ECOL316407:JW1965-MONOMER
Genevestigator:P76352 Uniprot:P76352
Length = 495
Score = 135 (52.6 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 58/265 (21%), Positives = 114/265 (43%)
Query: 208 LVLALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQG 267
+++ L +L L +FG + +D + + + ++ A +L L + PA ++L G
Sbjct: 124 VIMTLFAVLLATLIHHFGEQI-IDFVAGDATTEVKALALTYLELTVLSYPAAAITLIGSG 182
Query: 268 IFRGFKDTRTPVFCLGLGNFSAVFMFPMLMY-YFK---LGVTGAAISTVGSQYMVTLLMI 323
RG +T+ P+ G N + + +L+Y F LG GA + S+Y+ + ++
Sbjct: 183 ALRGAGNTKIPLLINGSLNILNIIISGILIYGLFSWPGLGFVGAGLGLTISRYIGAVAIL 242
Query: 324 WYL----NKRTILSIPN-MKNLHFGDYLRSGGYLLGRTLAAVMTIT---LSTSIAARQGA 375
W L N +S+ + K L+F G + ++ +V+ + L+ A G
Sbjct: 243 WVLAIGFNPALRISLKSYFKPLNFSIIWEVMGIGIPASVESVLFTSGRLLTQMFVAGMGT 302
Query: 376 LAMAAHQICLQVWLSVSMLADAQAASGQALIASSFAKGDYNTVK-EITH-FALKTGLFTG 433
+A + I + +++ A ++ + G + ++ H F L T G
Sbjct: 303 SVIAGNFIAFSIAALINLPGSALGSASTIITGRRLGVGQIAQAEIQLRHVFWLST---LG 359
Query: 434 VTLAVILGASF-NYLATLFTSDTQV 457
+T L A F +A+ +T D QV
Sbjct: 360 LTAIAWLTAPFAGVMASFYTQDPQV 384
>UNIPROTKB|Q8EIX5 [details] [associations]
symbol:SO_0702 "Multidrug and toxin efflux protein MATE
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006855
"drug transmembrane transport" evidence=ISS] [GO:0042493 "response
to drug" evidence=ISS] InterPro:IPR002528 Pfam:PF01554
GO:GO:0016020 GO:GO:0006855 GO:GO:0015238 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0015297 TIGRFAMs:TIGR00797
HOGENOM:HOG000272443 RefSeq:NP_716335.1 DNASU:1168562
GeneID:1168562 KEGG:son:SO_0702 PATRIC:23521086 OMA:IDHSAVA
ProtClustDB:CLSK905893 Uniprot:Q8EIX5
Length = 452
Score = 124 (48.7 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 72/267 (26%), Positives = 115/267 (43%)
Query: 207 ALVLA-LTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLA- 264
AL+L + I L AL F LF ++G + S I ++ +GAP +VL +
Sbjct: 96 ALLLTFILIASLSALGSIFIEPLF-SLLGANETSLPLI--HDYMMYWYVGAPLLVLLMVG 152
Query: 265 IQGIFRGFKDTRTPVFCLGLGNFSAVFMFPMLMY----YFKLGVTGAAISTVGSQYMVTL 320
QG+ R DTR+P + L + + P+L++ + +L + GAAI+T+ S ++V L
Sbjct: 153 NQGL-RSTGDTRSPAMIMTLAAIINLILDPLLIFGIGPFPRLEIQGAAIATLFS-WLVAL 210
Query: 321 LMIWYLNKRTILSIPNMKNLHFG-DYLRSGGYLLGRTL--AAVMTITLSTSIAARQGALA 377
+ YL I+ ++ F D +R+ L AA+M + + A LA
Sbjct: 211 SLSGYL---LIIKHRMLERAAFDIDRMRANWSKLAHIAQPAALMNLINPLANAVIMAMLA 267
Query: 378 MAAHQICLQVW----LSVSMLADAQAASGQAL--IASSFAKGDYNTVKEITHFALKTGLF 431
H L +L A S + IA + G K+ +LK L
Sbjct: 268 HIDHSAVAAFGAGTRLESVLLIVVMALSSSLMPFIAQNLGAGQPQRAKQALLLSLKFILV 327
Query: 432 TGVTLAVILGASFNYLATLFTSDTQVL 458
L + L LA+LF++D QVL
Sbjct: 328 FQTLLYIPLAFFAQPLASLFSTDPQVL 354
Score = 47 (21.6 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 104 LIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKV 153
L+ +SLP + G L +T +I +LG LA+ + + I+S +
Sbjct: 16 LLNMSLPNLIGIMTILGFSLADTFFISQLGTEALAAISFTFPVTLIISSI 65
>TIGR_CMR|SO_0702 [details] [associations]
symbol:SO_0702 "MATE efflux family protein" species:211586
"Shewanella oneidensis MR-1" [GO:0006855 "drug transmembrane
transport" evidence=ISS] [GO:0042493 "response to drug"
evidence=ISS] InterPro:IPR002528 Pfam:PF01554 GO:GO:0016020
GO:GO:0006855 GO:GO:0015238 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0015297 TIGRFAMs:TIGR00797 HOGENOM:HOG000272443
RefSeq:NP_716335.1 DNASU:1168562 GeneID:1168562 KEGG:son:SO_0702
PATRIC:23521086 OMA:IDHSAVA ProtClustDB:CLSK905893 Uniprot:Q8EIX5
Length = 452
Score = 124 (48.7 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 72/267 (26%), Positives = 115/267 (43%)
Query: 207 ALVLA-LTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLA- 264
AL+L + I L AL F LF ++G + S I ++ +GAP +VL +
Sbjct: 96 ALLLTFILIASLSALGSIFIEPLF-SLLGANETSLPLI--HDYMMYWYVGAPLLVLLMVG 152
Query: 265 IQGIFRGFKDTRTPVFCLGLGNFSAVFMFPMLMY----YFKLGVTGAAISTVGSQYMVTL 320
QG+ R DTR+P + L + + P+L++ + +L + GAAI+T+ S ++V L
Sbjct: 153 NQGL-RSTGDTRSPAMIMTLAAIINLILDPLLIFGIGPFPRLEIQGAAIATLFS-WLVAL 210
Query: 321 LMIWYLNKRTILSIPNMKNLHFG-DYLRSGGYLLGRTL--AAVMTITLSTSIAARQGALA 377
+ YL I+ ++ F D +R+ L AA+M + + A LA
Sbjct: 211 SLSGYL---LIIKHRMLERAAFDIDRMRANWSKLAHIAQPAALMNLINPLANAVIMAMLA 267
Query: 378 MAAHQICLQVW----LSVSMLADAQAASGQAL--IASSFAKGDYNTVKEITHFALKTGLF 431
H L +L A S + IA + G K+ +LK L
Sbjct: 268 HIDHSAVAAFGAGTRLESVLLIVVMALSSSLMPFIAQNLGAGQPQRAKQALLLSLKFILV 327
Query: 432 TGVTLAVILGASFNYLATLFTSDTQVL 458
L + L LA+LF++D QVL
Sbjct: 328 FQTLLYIPLAFFAQPLASLFSTDPQVL 354
Score = 47 (21.6 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 104 LIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKV 153
L+ +SLP + G L +T +I +LG LA+ + + I+S +
Sbjct: 16 LLNMSLPNLIGIMTILGFSLADTFFISQLGTEALAAISFTFPVTLIISSI 65
>TIGR_CMR|CHY_1592 [details] [associations]
symbol:CHY_1592 "MATE efflux family protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006810
"transport" evidence=ISS] InterPro:IPR002528 Pfam:PF01554
GO:GO:0016020 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0015238
GO:GO:0015297 eggNOG:COG0534 TIGRFAMs:TIGR00797 RefSeq:YP_360420.1
STRING:Q3ABR4 GeneID:3728224 KEGG:chy:CHY_1592 PATRIC:21276309
HOGENOM:HOG000056140 BioCyc:CHYD246194:GJCN-1591-MONOMER
Uniprot:Q3ABR4
Length = 442
Score = 102 (41.0 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 53/228 (23%), Positives = 93/228 (40%)
Query: 251 LRAIGAPAVVLSLAI--QGIFRGFKDTRTPVFCLGLGNFSAVFMFPMLMY----YFKLGV 304
L+ IG AV L G+ R TR P++ + N +F+ +L++ + KLG
Sbjct: 124 LKTIGKFAVFALLVFVGNGLLRAIGQTRVPLYTAVVINCLNIFLDYVLIFGKLGFPKLGP 183
Query: 305 TGAAIS-----TVGSQYMVTLLMIWYLNKRTILS---------IPNMKNLHFGDYLRSGG 350
GAA++ T+GS ++ L I + K+ L + + + L G
Sbjct: 184 GGAALASGISLTLGS--IIALGYIGLIEKKLSLKFQWLEIRVYLKKIIQISIPAALEEGS 241
Query: 351 YLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIASSF 410
+ LGR + + + + L GA++ AA++I + + M A + + A +
Sbjct: 242 FSLGRVVVSFILVKL--------GAVSFAANEIAIYIESLAYMPGYGLAIAAYSFAARFY 293
Query: 411 AKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATLFTSDTQVL 458
+G+Y K L + + +I L LFT D VL
Sbjct: 294 GEGNYQKAKSYIEKTLNLTILGMGLMGIIFFFLPQQLGLLFTKDVDVL 341
Score = 70 (29.7 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 103 DLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVF 154
++I ++LPA+ + + +++TA +GRLG A AGVS I S F
Sbjct: 4 EIIKVALPAVLEMILHMVVGIVDTAMVGRLGAT--AVAGVSLGAQIIFSTFF 53
>UNIPROTKB|Q722U5 [details] [associations]
symbol:LMOf2365_0634 "Putative membrane protein"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002528 Pfam:PF01554
GO:GO:0016020 GO:GO:0015238 GO:GO:0015297 EMBL:AE017262
GenomeReviews:AE017262_GR eggNOG:COG0534 TIGRFAMs:TIGR00797
HOGENOM:HOG000247551 RefSeq:YP_013239.1 STRING:Q722U5
GeneID:2798282 KEGG:lmf:LMOf2365_0634 PATRIC:20322471 OMA:MAMISMW
ProtClustDB:CLSK563995 Uniprot:Q722U5
Length = 446
Score = 127 (49.8 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 68/272 (25%), Positives = 121/272 (44%)
Query: 204 VSTALVLALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSL 263
++ LV+A IGI+ ++ F S FL MGI +++ A FL + IG +VV+++
Sbjct: 89 ITNGLVVAFLIGIVMSIIFIFMSKNFLTWMGIDP-HLVQVGAP-FLEI--IGGSSVVIAI 144
Query: 264 --AIQGIFR--GF--KDTRTPV---FCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGS 314
+I I R G+ + PV +GN+ +F++ L Y GV G IST +
Sbjct: 145 HASILPILRAHGYVRQSILVPVTISIINVVGNY--LFLYGPLAY-LDYGVAGVGISTAVA 201
Query: 315 QYMVTLLMIWYLNKRTILSIPNMKNLH------FGDYLRSGGYLLGRTLAAVMTITLSTS 368
++ L IW L K + + K L LR G G L+ + + T+
Sbjct: 202 NFVGMGLAIWMLRKYIGYTF-HFKKLEQVSKKLLYSILRLGLPSAGENLSYAGSQLVVTA 260
Query: 369 IAARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKT 428
I A G A+ V V++ A A + Q +I + + + + + K
Sbjct: 261 IIAILGTEALTTKVYASTVSQFVALFAIALGQASQIIIGRAVGAKEIDKAYKQGLRSWKI 320
Query: 429 GLFTGVTLAVILGASFNYLATLFTSDTQVLGI 460
GL + ++V + + +LFT++T+++ +
Sbjct: 321 GLVVAIVVSVSIYLFAEPIMSLFTTNTEIIAM 352
Score = 42 (19.8 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 16/73 (21%), Positives = 29/73 (39%)
Query: 95 SCVQNV-QLDLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKV 153
S V V + L L+ P Q + M ++ +G +A+ GV+ I I +
Sbjct: 2 SSVHKVASISLFTLAWPIFLEQFLRLMISYIDVFMLGHYSDDAVAATGVANQILVISIII 61
Query: 154 FNIPLLSVATSFV 166
+ +SV +
Sbjct: 62 YGF--ISVGVQII 72
>UNIPROTKB|Q9KRU4 [details] [associations]
symbol:norM "Multidrug resistance protein NorM"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006855 "drug transmembrane transport" evidence=ISS]
[GO:0042493 "response to drug" evidence=ISS] InterPro:IPR002528
Pfam:PF01554 GO:GO:0016021 GO:GO:0005886 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0046677 GO:GO:0006855 GO:GO:0015238
GO:GO:0006814 GO:GO:0015297 eggNOG:COG0534 KO:K03327
TIGRFAMs:TIGR00797 ProtClustDB:PRK01766 EMBL:AB063193 PIR:H82186
RefSeq:NP_231180.2 TCDB:2.A.66.1.2 DNASU:2613919 GeneID:2613919
KEGG:vch:VC1540 PATRIC:20082141 OMA:VATMAVF Uniprot:Q9KRU4
Length = 457
Score = 126 (49.4 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 75/372 (20%), Positives = 147/372 (39%)
Query: 103 DLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVA 162
+LI L+ P + + ++T G + +++A+ ++ SI+ + S +F + LL
Sbjct: 10 NLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIW-LPSILFGVGLLMAL 68
Query: 163 TSFVAEXXXXXXXXXXXXXXXCPNVSYNGCDESTDRKLLPSVSTALVLALTIGILEALAM 222
VA+ NG K+ V L+LAL + + +A+
Sbjct: 69 VPVVAQL--------------------NGAGRQ--HKIPFEVHQGLILALLVSV-PIIAV 105
Query: 223 YFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCL 282
F + + M + A + + + A+ PA +L A++ G T+ P +
Sbjct: 106 LFQTQFIIRFMDVEEAMATKTVGYMHAVIFAV--PAYLLFQALRSFTDGMSLTK-PAMVI 162
Query: 283 GLGNFSAVFMFPMLMYYFK-----LGVTGAAISTVGSQYMVTLLMIWYL-NKRTILSIPN 336
G + Y K LG G ++T +++ LL+++Y+ + + +
Sbjct: 163 GFIGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKV 222
Query: 337 MKNLHFG---DYLRSGGYLLGRTLAAVM--TITLSTSIA---ARQGALAMAAHQICLQVW 388
+ H + +R + LG +AA + +TL +A A G+ +AAHQ+ L
Sbjct: 223 FETFHKPQPKELIRL--FRLGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFS 280
Query: 389 LSVSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLA 448
V M + A+ + + D + L TGL T A++ +A
Sbjct: 281 SLVFMFPMSIGAAVSIRVGHKLGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIA 340
Query: 449 TLFTSDTQVLGI 460
L+T + V+ +
Sbjct: 341 LLYTENQVVVAL 352
>TIGR_CMR|VC_1540 [details] [associations]
symbol:VC_1540 "multidrug resistance protein NorM,
putative" species:686 "Vibrio cholerae O1 biovar El Tor"
[GO:0006855 "drug transmembrane transport" evidence=ISS]
[GO:0042493 "response to drug" evidence=ISS] InterPro:IPR002528
Pfam:PF01554 GO:GO:0016021 GO:GO:0005886 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0046677 GO:GO:0006855 GO:GO:0015238
GO:GO:0006814 GO:GO:0015297 eggNOG:COG0534 KO:K03327
TIGRFAMs:TIGR00797 ProtClustDB:PRK01766 EMBL:AB063193 PIR:H82186
RefSeq:NP_231180.2 TCDB:2.A.66.1.2 DNASU:2613919 GeneID:2613919
KEGG:vch:VC1540 PATRIC:20082141 OMA:VATMAVF Uniprot:Q9KRU4
Length = 457
Score = 126 (49.4 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 75/372 (20%), Positives = 147/372 (39%)
Query: 103 DLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVA 162
+LI L+ P + + ++T G + +++A+ ++ SI+ + S +F + LL
Sbjct: 10 NLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIW-LPSILFGVGLLMAL 68
Query: 163 TSFVAEXXXXXXXXXXXXXXXCPNVSYNGCDESTDRKLLPSVSTALVLALTIGILEALAM 222
VA+ NG K+ V L+LAL + + +A+
Sbjct: 69 VPVVAQL--------------------NGAGRQ--HKIPFEVHQGLILALLVSV-PIIAV 105
Query: 223 YFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCL 282
F + + M + A + + + A+ PA +L A++ G T+ P +
Sbjct: 106 LFQTQFIIRFMDVEEAMATKTVGYMHAVIFAV--PAYLLFQALRSFTDGMSLTK-PAMVI 162
Query: 283 GLGNFSAVFMFPMLMYYFK-----LGVTGAAISTVGSQYMVTLLMIWYL-NKRTILSIPN 336
G + Y K LG G ++T +++ LL+++Y+ + + +
Sbjct: 163 GFIGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKV 222
Query: 337 MKNLHFG---DYLRSGGYLLGRTLAAVM--TITLSTSIA---ARQGALAMAAHQICLQVW 388
+ H + +R + LG +AA + +TL +A A G+ +AAHQ+ L
Sbjct: 223 FETFHKPQPKELIRL--FRLGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFS 280
Query: 389 LSVSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLA 448
V M + A+ + + D + L TGL T A++ +A
Sbjct: 281 SLVFMFPMSIGAAVSIRVGHKLGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIA 340
Query: 449 TLFTSDTQVLGI 460
L+T + V+ +
Sbjct: 341 LLYTENQVVVAL 352
>TIGR_CMR|SO_2295 [details] [associations]
symbol:SO_2295 "MATE efflux family protein" species:211586
"Shewanella oneidensis MR-1" [GO:0006855 "drug transmembrane
transport" evidence=ISS] [GO:0042493 "response to drug"
evidence=ISS] InterPro:IPR002528 Pfam:PF01554 GO:GO:0016021
GO:GO:0005886 GO:GO:0006811 GO:GO:0015238 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0015297 eggNOG:COG0534 KO:K03327
TIGRFAMs:TIGR00797 HOGENOM:HOG000038538 OMA:QGFWLAF
RefSeq:NP_717891.1 ProteinModelPortal:Q8EES3 GeneID:1170020
KEGG:son:SO_2295 PATRIC:23524213 ProtClustDB:CLSK906674
Uniprot:Q8EES3
Length = 459
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 93/376 (24%), Positives = 154/376 (40%)
Query: 104 LIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVAT 163
LI L+LP + Q + M ++T GR+ +++A+ V TS++ + + +F LL T
Sbjct: 11 LIQLALPVLIAQVTQTMMGFIDTVMAGRVSAVDMAAVAVGTSLW-LPAILFVQGLLMAFT 69
Query: 164 SFVAEXXXXXXXXXXXXXXXCPNVSYNGCDESTDRKLLPSVSTALVLALTIGILEALAMY 223
A +NG + + + P LAL IG L +
Sbjct: 70 PLFAH--------------------HNGANNQ--KAIQPLAFQGAYLAL-IGGLGVMVFL 106
Query: 224 FGSGLFLDIMGIS-SASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCL 282
+ L L M + ++ I ++ GAPA VL ++G G T P +
Sbjct: 107 ASAPLVLSHMNLEPQLYNLTIG---YIDGILWGAPAFVLYQVLRGCSEGISYT-LPTMVI 162
Query: 283 G-LG---NFSAVFMFPMLMYYF---KLGVTGAAISTVGSQYMVTLLMIWYLN-KRTILSI 334
G +G N A ++F + +F +G G I+T + + + M Y+ + ++
Sbjct: 163 GFVGLAVNIPANYIF--IYGHFGIPAMGGAGCGIATALVFWAMLIAMAIYMQFHKKFAAL 220
Query: 335 PNMKNLHFGDYLRSGGYL-LGRTLAAVM--TITLSTSIA---ARQGALAMAAHQICLQVW 388
H D+ LG +A + ++L IA A GA +A+HQI L
Sbjct: 221 APFSQFHRPDFATMKKMTKLGLPIAMALFFEVSLFAIIALLLAPLGATVVASHQIALNFS 280
Query: 389 LSVSMLADAQAASGQALIASSFAKGDY--NTVKEITHFALKTGLFTGVTLAV---ILGAS 443
V ML + G IA S G Y +I+ K GL ++LA+ IL
Sbjct: 281 AIVFMLP---LSIG---IAVSIRIGYYLGRDRADISAVVAKVGLLLALSLALSTAILTVL 334
Query: 444 FNY-LATLFTSDTQVL 458
F + +A L+ SD +V+
Sbjct: 335 FRFQIAELYNSDPEVV 350
>UNIPROTKB|Q48DJ8 [details] [associations]
symbol:dinF "DNA-damage-inducible protein F" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0006974 "response
to DNA damage stimulus" evidence=ISS] InterPro:IPR002528
Pfam:PF01554 GO:GO:0016020 GO:GO:0006974 GO:GO:0015238
GO:GO:0015297 EMBL:CP000058 GenomeReviews:CP000058_GR
eggNOG:COG0534 KO:K03327 TIGRFAMs:TIGR00797 HOGENOM:HOG000253154
OMA:WAMGFLR RefSeq:YP_276543.1 STRING:Q48DJ8 GeneID:3557074
KEGG:psp:PSPPH_4427 PATRIC:19978345 ProtClustDB:CLSK868921
Uniprot:Q48DJ8
Length = 446
Score = 120 (47.3 bits), Expect = 0.00034, P = 0.00034
Identities = 64/249 (25%), Positives = 111/249 (44%)
Query: 198 RKLLPSVSTALVLALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAP 257
R LL + A+ LAL +G++ A+ F S L L +M SA ++ F + R G P
Sbjct: 93 RILLQGLLLAIGLALLLGVI---ALPF-SHLALAMMQ-PSADLQQMTLDFFYT-RLFGLP 146
Query: 258 AVVLSLAIQGIFRGFKDTRTPVFCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYM 317
A + S A+ G F G ++ R P+ L + N + + + GV G+A ++V +++
Sbjct: 147 AALASYALVGWFLGAQNARAPLAILLITNLVNIALNLWFVIGLDWGVVGSARASVLAEWT 206
Query: 318 VTLLMIWYLNKRTILSIPNM---KNL----HFGDYLRSGGYLLGRTLAAVMTITLSTSIA 370
+L + L ++T+ + P L ++ L + RTLA + L T
Sbjct: 207 GVVLGL-LLARKTLRAWPGQIVWSALKLWSNWRPLLAVNRDIFLRTLALQSVMFLITVQG 265
Query: 371 ARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGL 430
AR G +AA+ + L L + D A + +AL + D +T++ A L
Sbjct: 266 ARLGDATVAANALLLNGLLLTAHALDGLAHAVEALCGHAIGARDRDTLRRSLVVAGGWSL 325
Query: 431 FTGVTLAVI 439
V A++
Sbjct: 326 IASVAFALL 334
>TAIR|locus:2206960 [details] [associations]
symbol:AT1G33110 "AT1G33110" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006855 "drug
transmembrane transport" evidence=IEA] [GO:0015238 "drug
transmembrane transporter activity" evidence=IEA] [GO:0015297
"antiporter activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA;ISS] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0009610 "response to symbiotic fungus"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] InterPro:IPR002528 Pfam:PF01554 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0016020 GO:GO:0015238 GO:GO:0015297
eggNOG:COG0534 KO:K03327 TIGRFAMs:TIGR00797 HOGENOM:HOG000177025
ProtClustDB:CLSN2682856 EMBL:AY062756 EMBL:AY114687 IPI:IPI00535194
RefSeq:NP_174587.1 UniGene:At.15880 UniGene:At.67163
ProteinModelPortal:Q8W488 IntAct:Q8W488 STRING:Q8W488 PRIDE:Q8W488
EnsemblPlants:AT1G33110.1 GeneID:840207 KEGG:ath:AT1G33110
TAIR:At1g33110 InParanoid:Q8W488 OMA:LMIVHNI PhylomeDB:Q8W488
ArrayExpress:Q8W488 Genevestigator:Q8W488 Uniprot:Q8W488
Length = 494
Score = 98 (39.6 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 54/235 (22%), Positives = 101/235 (42%)
Query: 222 MYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAP-AVVLSLAIQGIFRGFKDTRTPVF 280
+Y SG L +G +R+ R ++L IG + V S Q + + +
Sbjct: 135 VYIFSGPILLALG-QEERIVRVA--RIIALWVIGINFSFVPSFTCQMFLQAQSKNKIIAY 191
Query: 281 CLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLN----KRTI--LSI 334
+ VF+ +LM +F G+TGA ST+ + ++ + + ++ K T S+
Sbjct: 192 VAAVSLGVHVFLSWLLMVHFNFGITGAMTSTLVAFWLPNIAQLLFVTCGGCKDTWRGFSM 251
Query: 335 PNMKNLH--FGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVWLSVS 392
K+L F + SGG L + + L+ ++ + +A+ A ICL +
Sbjct: 252 MAFKDLWPVFKLSMSSGGMLCLELWYNSILVLLTGNL--KNAEVALDALAICLNINGLEM 309
Query: 393 MLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYL 447
M+A A+ +++ G+ K FA T +FT ++L ++L F +L
Sbjct: 310 MIALGFLAAASVRVSNELGSGNPKGAK----FATLTAVFTSLSLGIVLFFVFLFL 360
Score = 65 (27.9 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 18/61 (29%), Positives = 35/61 (57%)
Query: 104 LIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVAT 163
L +++ PAI + ++ ++IG LGP+ELA+ ++ F +L + N LL +A+
Sbjct: 40 LWIVAAPAIFTRFSTFGVSIISQSFIGHLGPIELAAYSIT---FTVLLRFSNGILLGMAS 96
Query: 164 S 164
+
Sbjct: 97 A 97
>UNIPROTKB|Q9KU73 [details] [associations]
symbol:VC0650 "Putative uncharacterized protein VC0650"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002528 Pfam:PF01554 GO:GO:0016020
GenomeReviews:AE003852_GR GO:GO:0015238 GO:GO:0015297
TIGRFAMs:TIGR00797 InterPro:IPR015522 PANTHER:PTHR11206:SF6
EMBL:AE004151 PIR:E82296 RefSeq:NP_230299.1 DNASU:2615440
GeneID:2615440 KEGG:vch:VC0650 PATRIC:20080413 OMA:AYAILGY
ProtClustDB:PRK09575 Uniprot:Q9KU73
Length = 445
Score = 111 (44.1 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 53/270 (19%), Positives = 121/270 (44%)
Query: 204 VSTALVLALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSL 263
++T L+ L + + A+ ++F + FL G + + Q +L + +G + S+
Sbjct: 88 LATGLMSLLLLAPIVAVILWFMADDFLRWQG-AEGRVFELGLQ-YLQVLIVGCLFTLGSI 145
Query: 264 AIQGIFRGFKDTRTPVFCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMI 323
A+ + R + +G + + + + + + + +TGAAI+T +Q +VTLL +
Sbjct: 146 AMPFLLRNDHSPNLATLLMVIGALTNIALDYLFIAWLQWELTGAAIATTLAQVVVTLLGL 205
Query: 324 WY---------LNKRTIL----SIPNMKNLHFGDYLRSGGYLLGRTLAAVM-TITLSTSI 369
Y L +R + S+P + + + Y G T+ A+ T+ +
Sbjct: 206 AYFFSARANMRLTRRCLRLEWHSLPKIFAIGVSSFFM---YAYGSTMVALHNTLMIEYGN 262
Query: 370 AARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTG 429
A GA A+ + + + +L+V +A+ Q L + F +Y+ ++++ A+
Sbjct: 263 AVMVGAYAVMGYIVTIY-YLTVEGIANGM----QPLASYHFGARNYDHIRKLLRLAMGIA 317
Query: 430 LFTGVTLAVILGASFNYLATLF-TSDTQVL 458
+ G+ ++L +F +SD++++
Sbjct: 318 VLGGMAFVLVLNLFPEQAIAIFNSSDSELI 347
Score = 49 (22.3 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 13/71 (18%), Positives = 35/71 (49%)
Query: 98 QNVQLDLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIP 157
+++ + ++P +A + + Q+++ +IG E AG++ + + ++ + I
Sbjct: 4 RSIYRQFVRYTIPTVAAMLVNGLYQVVDGIFIGHYVGAE-GLAGINVA-WPVIGTILGIG 61
Query: 158 LL-SVATSFVA 167
+L V T +A
Sbjct: 62 MLVGVGTGALA 72
>TIGR_CMR|VC_0650 [details] [associations]
symbol:VC_0650 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR002528
Pfam:PF01554 GO:GO:0016020 GenomeReviews:AE003852_GR GO:GO:0015238
GO:GO:0015297 TIGRFAMs:TIGR00797 InterPro:IPR015522
PANTHER:PTHR11206:SF6 EMBL:AE004151 PIR:E82296 RefSeq:NP_230299.1
DNASU:2615440 GeneID:2615440 KEGG:vch:VC0650 PATRIC:20080413
OMA:AYAILGY ProtClustDB:PRK09575 Uniprot:Q9KU73
Length = 445
Score = 111 (44.1 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 53/270 (19%), Positives = 121/270 (44%)
Query: 204 VSTALVLALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSL 263
++T L+ L + + A+ ++F + FL G + + Q +L + +G + S+
Sbjct: 88 LATGLMSLLLLAPIVAVILWFMADDFLRWQG-AEGRVFELGLQ-YLQVLIVGCLFTLGSI 145
Query: 264 AIQGIFRGFKDTRTPVFCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMI 323
A+ + R + +G + + + + + + + +TGAAI+T +Q +VTLL +
Sbjct: 146 AMPFLLRNDHSPNLATLLMVIGALTNIALDYLFIAWLQWELTGAAIATTLAQVVVTLLGL 205
Query: 324 WY---------LNKRTIL----SIPNMKNLHFGDYLRSGGYLLGRTLAAVM-TITLSTSI 369
Y L +R + S+P + + + Y G T+ A+ T+ +
Sbjct: 206 AYFFSARANMRLTRRCLRLEWHSLPKIFAIGVSSFFM---YAYGSTMVALHNTLMIEYGN 262
Query: 370 AARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTG 429
A GA A+ + + + +L+V +A+ Q L + F +Y+ ++++ A+
Sbjct: 263 AVMVGAYAVMGYIVTIY-YLTVEGIANGM----QPLASYHFGARNYDHIRKLLRLAMGIA 317
Query: 430 LFTGVTLAVILGASFNYLATLF-TSDTQVL 458
+ G+ ++L +F +SD++++
Sbjct: 318 VLGGMAFVLVLNLFPEQAIAIFNSSDSELI 347
Score = 49 (22.3 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 13/71 (18%), Positives = 35/71 (49%)
Query: 98 QNVQLDLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIP 157
+++ + ++P +A + + Q+++ +IG E AG++ + + ++ + I
Sbjct: 4 RSIYRQFVRYTIPTVAAMLVNGLYQVVDGIFIGHYVGAE-GLAGINVA-WPVIGTILGIG 61
Query: 158 LL-SVATSFVA 167
+L V T +A
Sbjct: 62 MLVGVGTGALA 72
>UNIPROTKB|Q9KVQ1 [details] [associations]
symbol:VC_0090 "DNA-damage-inducible protein F"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR002528
Pfam:PF01554 GO:GO:0016020 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0015238 GO:GO:0015297 KO:K03327 TIGRFAMs:TIGR00797 PIR:G82364
RefSeq:NP_229749.1 DNASU:2615829 GeneID:2615829 KEGG:vch:VC0090
PATRIC:20079236 OMA:ATKGSEM ProtClustDB:CLSK873856 Uniprot:Q9KVQ1
Length = 454
Score = 109 (43.4 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 55/214 (25%), Positives = 101/214 (47%)
Query: 212 LTIGILEALAMYFGSGLFLDIMGISSASS-MRIPAQRFLSLRAIGAPAVVLSLAIQGIFR 270
+ +G L AL + F + I S ASS ++ A+ + +RA APA +L+ + G
Sbjct: 104 IALG-LAALFLLFHRPVAELIFHFSDASSEVKTYAEAYFYIRAWSAPAALLNFVLLGWLL 162
Query: 271 GFKDTRTPVFCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQY---MVTLLMIW-YL 326
G ++ R P++ + + N + + + +L+ L V GAAI++V + Y + LL + Y
Sbjct: 163 GTQNARAPMWMVIITNLTNIVLDLLLVLGLGLKVEGAAIASVIADYAGLLFGLLCVGRYW 222
Query: 327 NKRTILS----IPNM-KNLHFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAH 381
+ + + IP++ K L L +L L AV + T A G +AA+
Sbjct: 223 RQHQLPAPFSFIPSLTKELSRLVALNRDIFLRSLCLQAVFSFM--TFQGAALGDDIVAAN 280
Query: 382 QICLQVWLSVSMLADAQAASGQALIASSF-AKGD 414
+ + + +S D A + +A++ + AK D
Sbjct: 281 AVLMSFLMMISYGMDGFAYAMEAMVGKAIGAKDD 314
Score = 51 (23.0 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 99 NVQLDLIMLSLPAIAGQAIEPMAQLMETAYIGRL 132
NV ++ ++LP + P+ L++ A IG L
Sbjct: 15 NVHRQVLAIALPMVLSNITVPLLGLVDAAVIGHL 48
>TIGR_CMR|VC_0090 [details] [associations]
symbol:VC_0090 "DNA-damage-inducible protein F" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002528 Pfam:PF01554 GO:GO:0016020
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0015238 GO:GO:0015297
KO:K03327 TIGRFAMs:TIGR00797 PIR:G82364 RefSeq:NP_229749.1
DNASU:2615829 GeneID:2615829 KEGG:vch:VC0090 PATRIC:20079236
OMA:ATKGSEM ProtClustDB:CLSK873856 Uniprot:Q9KVQ1
Length = 454
Score = 109 (43.4 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 55/214 (25%), Positives = 101/214 (47%)
Query: 212 LTIGILEALAMYFGSGLFLDIMGISSASS-MRIPAQRFLSLRAIGAPAVVLSLAIQGIFR 270
+ +G L AL + F + I S ASS ++ A+ + +RA APA +L+ + G
Sbjct: 104 IALG-LAALFLLFHRPVAELIFHFSDASSEVKTYAEAYFYIRAWSAPAALLNFVLLGWLL 162
Query: 271 GFKDTRTPVFCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQY---MVTLLMIW-YL 326
G ++ R P++ + + N + + + +L+ L V GAAI++V + Y + LL + Y
Sbjct: 163 GTQNARAPMWMVIITNLTNIVLDLLLVLGLGLKVEGAAIASVIADYAGLLFGLLCVGRYW 222
Query: 327 NKRTILS----IPNM-KNLHFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAH 381
+ + + IP++ K L L +L L AV + T A G +AA+
Sbjct: 223 RQHQLPAPFSFIPSLTKELSRLVALNRDIFLRSLCLQAVFSFM--TFQGAALGDDIVAAN 280
Query: 382 QICLQVWLSVSMLADAQAASGQALIASSF-AKGD 414
+ + + +S D A + +A++ + AK D
Sbjct: 281 AVLMSFLMMISYGMDGFAYAMEAMVGKAIGAKDD 314
Score = 51 (23.0 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 99 NVQLDLIMLSLPAIAGQAIEPMAQLMETAYIGRL 132
NV ++ ++LP + P+ L++ A IG L
Sbjct: 15 NVHRQVLAIALPMVLSNITVPLLGLVDAAVIGHL 48
>TIGR_CMR|BA_1402 [details] [associations]
symbol:BA_1402 "MATE efflux family protein" species:198094
"Bacillus anthracis str. Ames" [GO:0006855 "drug transmembrane
transport" evidence=ISS] [GO:0042493 "response to drug"
evidence=ISS] InterPro:IPR002528 Pfam:PF01554 GO:GO:0016021
GO:GO:0005886 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006811 GO:GO:0015238 GO:GO:0015297
eggNOG:COG0534 KO:K03327 TIGRFAMs:TIGR00797 HOGENOM:HOG000038538
ProtClustDB:PRK01766 RefSeq:NP_843859.1 RefSeq:YP_018023.1
RefSeq:YP_027564.1 DNASU:1084137 EnsemblBacteria:EBBACT00000010144
EnsemblBacteria:EBBACT00000016354 EnsemblBacteria:EBBACT00000019704
GeneID:1084137 GeneID:2819818 GeneID:2849552 KEGG:ban:BA_1402
KEGG:bar:GBAA_1402 KEGG:bat:BAS1295 OMA:FASFHIF
BioCyc:BANT260799:GJAJ-1369-MONOMER
BioCyc:BANT261594:GJ7F-1429-MONOMER Uniprot:Q81T85
Length = 453
Score = 108 (43.1 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 54/232 (23%), Positives = 98/232 (42%)
Query: 242 RIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCLGLG-NFSAVFMFPMLMYYF 300
RI AQ FLS+ AIG + ++G TRT + L + V + ++ F
Sbjct: 128 RIAAQ-FLSIIAIGIIPLFTYTVLRGFIDALGKTRTTMIITLLSLPINVVLNYVLIFGNF 186
Query: 301 ---KLGVTGAAISTVGSQYMVTLLMIWYLN-KRTILSIPNMKNLH------FGDYLRSG- 349
KLG GAAI++ + + + ++ + + K S K L+ + ++L+ G
Sbjct: 187 GFPKLGGVGAAIASAATYWCILIITVMIIRTKEPFASFNIFKQLYRPSLSSWKEFLKLGV 246
Query: 350 --GYLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIA 407
G+ + + +TL S +AAHQ + + S+ + A IA
Sbjct: 247 PIGFAIFFETSIFAAVTLMMS---NFSTTTIAAHQAAMN-FASLLYMTPLSLAMAMT-IA 301
Query: 408 SSFAKGD--YNTVKEITHFALKTGLFTGVTLAVILGASFNYLATLFTSDTQV 457
F G YN K+ + L + +++L + +A+++T+D QV
Sbjct: 302 VGFEVGAKRYNNAKQYGFIGIGLALAFALLYSILLYFFDDEIASIYTTDIQV 353
Score = 52 (23.4 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 16/64 (25%), Positives = 26/64 (40%)
Query: 105 IMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVATS 164
++L P Q +T G P++LA + TSI+ +S +L T
Sbjct: 15 VLLFFPIFVTQMSLFAMSFFDTTMSGHASPIDLAGVAIGTSIWIPVSTGLT-GILMATTP 73
Query: 165 FVAE 168
VA+
Sbjct: 74 IVAQ 77
>UNIPROTKB|Q8E8P4 [details] [associations]
symbol:dinF "DNA damage-inducible multidrug and toxin
efflux protein DinF" species:211586 "Shewanella oneidensis MR-1"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR002528
Pfam:PF01554 GO:GO:0016020 GO:GO:0015238 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0015297 TIGRFAMs:TIGR00797
HOGENOM:HOG000253154 RefSeq:NP_720133.1 GeneID:1172200
KEGG:son:SO_4617 PATRIC:23528897 OMA:FYNILAN ProtClustDB:CLSK907734
Uniprot:Q8E8P4
Length = 455
Score = 117 (46.2 bits), Expect = 0.00075, P = 0.00075
Identities = 81/365 (22%), Positives = 141/365 (38%)
Query: 104 LIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVAT 163
L L+LP I P+ L++TA IG L GV+ I ++ + L +AT
Sbjct: 21 LFALALPMILSNITVPLLGLVDTAVIGHLSDAYYLG-GVALGSTIITLIIWLLGFLRMAT 79
Query: 164 S-FVAEXXXXXXXXXXXXXXXCPNVSYNGCDESTDRKLLPSVSTALVLALTIGILEALAM 222
+ VA+ +Y D + KLL V A+ LA +GI L
Sbjct: 80 TGLVAQ-------------------AYGANDINAQLKLL--VQGAM-LATGLGIAMILLQ 117
Query: 223 YFGSGLFLDIMGISSAS-SMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFC 281
L + S AS + + + +R P +L+L + G G + + ++
Sbjct: 118 V---PLLSLALSFSEASVEVERYCREYFQIRIWSTPFALLNLVMLGWLLGRQQPKAAMWQ 174
Query: 282 LGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTILSIPNMK--- 338
L N + + + + + F GV GAA+++V + + + Y+ + + IPN
Sbjct: 175 LIFANVANIILDVLFVLGFGWGVKGAALASVFAD-ITAFSVALYMVLQQVKLIPNYPFAE 233
Query: 339 -NLH-----FGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVWLSVS 392
H FG LR + R+L T A G +AA+ + L + L +S
Sbjct: 234 IRAHIRFTGFGQLLRLNSDIFIRSLCLQTAFAFMTFHGAGLGDNTVAANAVLLNLLLLIS 293
Query: 393 MLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATLFT 452
D A +A + ++ + + E A T + +I +++ L T
Sbjct: 294 YALDGIAYYAEAEVGKAYGQKRAQQLHEAVVLAWCWSAITALGFTLIFSLWGSHIIELLT 353
Query: 453 SDTQV 457
S +V
Sbjct: 354 SIDEV 358
>TIGR_CMR|SO_4617 [details] [associations]
symbol:SO_4617 "DNA-damage-inducible protein F"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] InterPro:IPR002528 Pfam:PF01554
GO:GO:0016020 GO:GO:0015238 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0015297 TIGRFAMs:TIGR00797 HOGENOM:HOG000253154
RefSeq:NP_720133.1 GeneID:1172200 KEGG:son:SO_4617 PATRIC:23528897
OMA:FYNILAN ProtClustDB:CLSK907734 Uniprot:Q8E8P4
Length = 455
Score = 117 (46.2 bits), Expect = 0.00075, P = 0.00075
Identities = 81/365 (22%), Positives = 141/365 (38%)
Query: 104 LIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVAT 163
L L+LP I P+ L++TA IG L GV+ I ++ + L +AT
Sbjct: 21 LFALALPMILSNITVPLLGLVDTAVIGHLSDAYYLG-GVALGSTIITLIIWLLGFLRMAT 79
Query: 164 S-FVAEXXXXXXXXXXXXXXXCPNVSYNGCDESTDRKLLPSVSTALVLALTIGILEALAM 222
+ VA+ +Y D + KLL V A+ LA +GI L
Sbjct: 80 TGLVAQ-------------------AYGANDINAQLKLL--VQGAM-LATGLGIAMILLQ 117
Query: 223 YFGSGLFLDIMGISSAS-SMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFC 281
L + S AS + + + +R P +L+L + G G + + ++
Sbjct: 118 V---PLLSLALSFSEASVEVERYCREYFQIRIWSTPFALLNLVMLGWLLGRQQPKAAMWQ 174
Query: 282 LGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTILSIPNMK--- 338
L N + + + + + F GV GAA+++V + + + Y+ + + IPN
Sbjct: 175 LIFANVANIILDVLFVLGFGWGVKGAALASVFAD-ITAFSVALYMVLQQVKLIPNYPFAE 233
Query: 339 -NLH-----FGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVWLSVS 392
H FG LR + R+L T A G +AA+ + L + L +S
Sbjct: 234 IRAHIRFTGFGQLLRLNSDIFIRSLCLQTAFAFMTFHGAGLGDNTVAANAVLLNLLLLIS 293
Query: 393 MLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATLFT 452
D A +A + ++ + + E A T + +I +++ L T
Sbjct: 294 YALDGIAYYAEAEVGKAYGQKRAQQLHEAVVLAWCWSAITALGFTLIFSLWGSHIIELLT 353
Query: 453 SDTQV 457
S +V
Sbjct: 354 SIDEV 358
>UNIPROTKB|E1BR23 [details] [associations]
symbol:SLC47A2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0015238 "drug transmembrane transporter
activity" evidence=IEA] [GO:0015297 "antiporter activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR002528 Pfam:PF01554 GO:GO:0016020 GO:GO:0015238
GO:GO:0015297 TIGRFAMs:TIGR00797 GeneTree:ENSGT00390000015713
OMA:ISIMIGW EMBL:AADN02025805 EMBL:AADN02025806 IPI:IPI00589072
Ensembl:ENSGALT00000007629 Uniprot:E1BR23
Length = 370
Score = 90 (36.7 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 36/190 (18%), Positives = 78/190 (41%)
Query: 278 PVFCLGL-GNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYL--NKRTILSI 334
PV GL GN V + +Y F LG+ G+A + +QY T+ + Y+ K + +
Sbjct: 164 PVVLSGLVGNVVNVIANSVFLYVFHLGIVGSAWANTIAQYSQTIFLFLYIVGKKLHVKTW 223
Query: 335 PNMKNLHFGDYLRSGGYLLGRTLAAVM---TITLSTSIAARQGALAMAAHQICLQVWLSV 391
++ + L + T + + + + ++A + +V +
Sbjct: 224 GGWSRECLLEWDSFTSLAIPSMLMMCIEWWTYEIGSFLIGLLSVVELSAQSVIYEVSVVA 283
Query: 392 SMLADAQAASGQALIASSFAKGDYNTVKEITHFA-LKTGLFTGVTLAVILGASFNYLATL 450
M+ + + ++ GD K + + L TG F + + IL A+ + L +
Sbjct: 284 FMIPLGLGTAASVQVGNALGAGDIEVAKRSSSTSMLCTGAFC-IAVGAILAATKDVLGYI 342
Query: 451 FTSDTQVLGI 460
FT++ +++ +
Sbjct: 343 FTNEKEIIDL 352
Score = 68 (29.0 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 16/65 (24%), Positives = 35/65 (53%)
Query: 104 LIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVAT 163
L++L+ P I Q + + L+ + + G LG +ELAS ++ ++ N+ + L S
Sbjct: 16 LLVLAGPLILIQLLIFLIHLVSSIFCGHLGKVELASVTLAIAVINVTAISVGYGLSSACD 75
Query: 164 SFVAE 168
+ +++
Sbjct: 76 TLISQ 80
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.135 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 478 445 0.00091 118 3 11 22 0.46 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 606 (64 KB)
Total size of DFA: 220 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.99u 0.09s 33.08t Elapsed: 00:00:01
Total cpu time: 32.99u 0.09s 33.08t Elapsed: 00:00:01
Start: Sat May 11 12:30:41 2013 End: Sat May 11 12:30:42 2013