BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011769
(478 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SVE7|MATE3_ARATH MATE efflux family protein 3, chloroplastic OS=Arabidopsis thaliana
GN=DTX45 PE=2 SV=2
Length = 560
Score = 462 bits (1190), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/426 (57%), Positives = 315/426 (73%), Gaps = 10/426 (2%)
Query: 41 PNCSFGVINRAKNGFNPAIMCCGSVSDQHASDYITINPSGVGESESRKSAATSQSCVQNV 100
PN F + R K+ NP CG V D + S + + T + ++
Sbjct: 53 PNPMFPFVTRRKSQTNPD---CGVVKLGEEDD----SCSSLDKLPEVNGVHTGVARPVDI 105
Query: 101 QLDLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLS 160
+ +L+MLSLPAIAGQAI+P+ LMETAYIGRLG +EL SAGVS +IFN +SK+FNIPLLS
Sbjct: 106 KRELVMLSLPAIAGQAIDPLTLLMETAYIGRLGSVELGSAGVSMAIFNTISKLFNIPLLS 165
Query: 161 VATSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALVLALTIGILEAL 220
VATSFVAEDI++ +++D S+ S ++ G E RK L SVSTALVLA+ IGI EAL
Sbjct: 166 VATSFVAEDIAKIAAQDLASEDSQSDIPSQGLPE---RKQLSSVSTALVLAIGIGIFEAL 222
Query: 221 AMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVF 280
A+ SG FL +MGI S S M IPA++FL LRA+GAPA V+SLA+QGIFRGFKDT+TPV+
Sbjct: 223 ALSLASGPFLRLMGIQSMSEMFIPARQFLVLRALGAPAYVVSLALQGIFRGFKDTKTPVY 282
Query: 281 CLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTILSIPNMKNL 340
CLG+GNF AVF+FP+ +Y F++GV GAAIS+V SQY V +LM+ LNKR IL P + +L
Sbjct: 283 CLGIGNFLAVFLFPLFIYKFRMGVAGAAISSVISQYTVAILMLILLNKRVILLPPKIGSL 342
Query: 341 HFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVWLSVSMLADAQAA 400
FGDYL+SGG++LGRTL+ ++T+T++TS+AARQG AMAAHQIC+QVWL+VS+L DA A+
Sbjct: 343 KFGDYLKSGGFVLGRTLSVLVTMTVATSMAARQGVFAMAAHQICMQVWLAVSLLTDALAS 402
Query: 401 SGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATLFTSDTQVLGI 460
SGQALIASS +K D+ VKE+T F LK G+ TG+ LA++LG SF+ +A LF+ D +VL I
Sbjct: 403 SGQALIASSASKRDFEGVKEVTTFVLKIGVVTGIALAIVLGMSFSSIAGLFSKDPEVLRI 462
Query: 461 VRSGLL 466
VR G+L
Sbjct: 463 VRKGVL 468
>sp|Q84K71|MATE2_ARATH MATE efflux family protein 2, chloroplastic OS=Arabidopsis thaliana
GN=DTX44 PE=2 SV=1
Length = 521
Score = 308 bits (790), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 155/349 (44%), Positives = 237/349 (67%), Gaps = 13/349 (3%)
Query: 118 EPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVATSFVAEDISRSSSKD 177
+P+ L++TA++G +G ELA+ GVS S+FN++SK+FN+PLL+V TSFVAE+ + ++ D
Sbjct: 94 DPITSLVDTAFVGHIGSAELAAVGVSVSVFNLVSKLFNVPLLNVTTSFVAEEQAIAAKDD 153
Query: 178 STSDSSCPNVSYNGCDESTDRKLLPSVSTALVLALTIGILEALAMYFGSGLFLDIMGISS 237
+ S T +K+LPSVST+LVLA +GI EA+A+ GS +D+M I
Sbjct: 154 NDSIE-------------TSKKVLPSVSTSLVLAAGVGIAEAIALSLGSDFLMDVMAIPF 200
Query: 238 ASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCLGLGNFSAVFMFPMLM 297
S MRIPA++FL LRA GAP +V++LA QG FRGFKDT TP++ + GN + P+L+
Sbjct: 201 DSPMRIPAEQFLRLRAYGAPPIVVALAAQGAFRGFKDTTTPLYAVVAGNVLNAVLDPILI 260
Query: 298 YYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTILSIPNMKNLHFGDYLRSGGYLLGRTL 357
+ G++GAA +TV S+Y++ +++W LN+ +L P +K YL+SGG L+GRT+
Sbjct: 261 FVLGFGISGAAAATVISEYLIAFILLWKLNENVVLLSPQIKVGRANQYLKSGGLLIGRTV 320
Query: 358 AAVMTITLSTSIAARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIASSFAKGDYNT 417
A ++ TL+TS+AA+ G MA HQI L++WL+VS+L DA A + Q+L+A+++++G+Y
Sbjct: 321 ALLVPFTLATSLAAQNGPTQMAGHQIVLEIWLAVSLLTDALAIAAQSLLATTYSQGEYKQ 380
Query: 418 VKEITHFALKTGLFTGVTLAVILGASFNYLATLFTSDTQVLGIVRSGLL 466
+E+ L+ GL TG LA +L +F ++LFT+D++VL I SG L
Sbjct: 381 AREVLFGVLQVGLATGTGLAAVLFITFEPFSSLFTTDSEVLKIALSGTL 429
>sp|Q9SYD6|MATE1_ARATH MATE efflux family protein 1 OS=Arabidopsis thaliana GN=MATE PE=2
SV=2
Length = 515
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/379 (39%), Positives = 235/379 (62%), Gaps = 31/379 (8%)
Query: 118 EPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVATSFVAEDISRSSSKD 177
+P+A L++TA+IG++GP+ELA+ GVS ++FN +S++ PL+S+ TSFVAE+ + SS +D
Sbjct: 50 DPIASLVDTAFIGQIGPVELAAVGVSIALFNQVSRIAIFPLVSITTSFVAEEDACSSQQD 109
Query: 178 STSD-SSCPNVSYNGCDEST------------------------------DRKLLPSVST 206
+ D C + N E T ++ +PS S+
Sbjct: 110 TVRDHKECIEIGINNPTEETIELIPEKHKDSLSDEFKTSSSIFSISKPPAKKRNIPSASS 169
Query: 207 ALVLALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQ 266
AL++ +G+ +A+ + + L MG+ S M P+QR+LSLR++GAPAV+LSLA Q
Sbjct: 170 ALIIGGVLGLFQAVFLISAAKPLLSFMGVKHDSPMMRPSQRYLSLRSLGAPAVLLSLAAQ 229
Query: 267 GIFRGFKDTRTPVFCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYL 326
G+FRGFKDT TP+F +G+ + + + P+ ++ F+LGVTGAA + V SQY++ +++W L
Sbjct: 230 GVFRGFKDTTTPLFATVIGDVTNIILDPIFIFVFRLGVTGAATAHVISQYLMCGILLWKL 289
Query: 327 NKRTILSIPNMKNLHFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQ 386
+ + + K+L F ++++G LL R +A +TLS S+AAR+G+ +MAA Q+CLQ
Sbjct: 290 MGQVDIFNMSTKHLQFCRFMKNGFLLLMRVIAVTFCVTLSASLAAREGSTSMAAFQVCLQ 349
Query: 387 VWLSVSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNY 446
VWL+ S+LAD A +GQA++AS+FAK DY L+ GL G LAVILGA ++
Sbjct: 350 VWLATSLLADGYAVAGQAILASAFAKKDYKRAAATASRVLQLGLVLGFVLAVILGAGLHF 409
Query: 447 LATLFTSDTQVLGIVRSGL 465
A +FT D +VL ++ GL
Sbjct: 410 GARVFTKDDKVLHLISIGL 428
>sp|Q9SFB0|FRD3_ARATH MATE efflux family protein FRD3 OS=Arabidopsis thaliana GN=FRD3
PE=1 SV=1
Length = 526
Score = 262 bits (669), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 145/377 (38%), Positives = 228/377 (60%), Gaps = 34/377 (9%)
Query: 123 LMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVATSFVAED------------- 169
L++TA++GRLG ++LA+ GVS +IFN S++ PL+S+ TSFVAE+
Sbjct: 56 LIDTAFVGRLGAVQLAAVGVSIAIFNQASRITIFPLVSLTTSFVAEEDTMEKMKEEANKA 115
Query: 170 -----------------ISRSSSKDSTSDSS--CPNVSYNGCDEST--DRKLLPSVSTAL 208
IS +S D+ P+ N ++S +++ + + STA+
Sbjct: 116 NLVHAETILVQDSLEKGISSPTSNDTNQPQQPPAPDTKSNSGNKSNKKEKRTIRTASTAM 175
Query: 209 VLALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGI 268
+L L +G+++A+ + F S L L +MG+ S M PA ++LS+RA+GAPA++LSLA+QGI
Sbjct: 176 ILGLILGLVQAIFLIFSSKLLLGVMGVKPNSPMLSPAHKYLSIRALGAPALLLSLAMQGI 235
Query: 269 FRGFKDTRTPVFCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNK 328
FRGFKDT+TP+F + + + + P+ ++ +LG+ GAAI+ V SQY +TL++ +L K
Sbjct: 236 FRGFKDTKTPLFATVVADVINIVLDPIFIFVLRLGIIGAAIAHVISQYFMTLILFVFLAK 295
Query: 329 RTILSIPNMKNLHFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVW 388
+ L PN +L FG +L++G LL RT+A TL+ ++AAR G MAA QICLQVW
Sbjct: 296 KVNLIPPNFGDLQFGRFLKNGLLLLARTIAVTFCQTLAAAMAARLGTTPMAAFQICLQVW 355
Query: 389 LSVSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLA 448
L+ S+L D A +GQA++A SFA+ DYN V + L+ G G+ L+V +G + A
Sbjct: 356 LTSSLLNDGLAVAGQAILACSFAEKDYNKVTAVASRVLQMGFVLGLGLSVFVGLGLYFGA 415
Query: 449 TLFTSDTQVLGIVRSGL 465
+F+ D V+ ++ G+
Sbjct: 416 GVFSKDPAVIHLMAIGI 432
>sp|Q8W4G3|MATE4_ARATH MATE efflux family protein 4, chloroplastic OS=Arabidopsis thaliana
GN=DTX46 PE=2 SV=1
Length = 559
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 41/348 (11%)
Query: 103 DLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVA 162
+++M + PA P+ L++TA IG+ LELA+ G +T I + L F LSVA
Sbjct: 118 EIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVICDYLCYTFM--FLSVA 175
Query: 163 TS-FVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALVLALTIGI-LEAL 220
TS VA ++R DE + +S L + L G+ + L
Sbjct: 176 TSNLVATSLARQDK-----------------DEVQHQ-----ISILLFIGLACGVTMMVL 213
Query: 221 AMYFGSGLFLDIMGISSASSMRIP-AQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPV 279
FGS G+ +A +P A +++ +R + PAV++ Q G KD+ P+
Sbjct: 214 TRLFGSWALTAFTGVKNAD--IVPAANKYVQIRGLAWPAVLIGWVAQSASLGMKDSWGPL 271
Query: 280 FCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTI----LSIP 335
L + + +L + G+ GAA +T+ SQ + +M+ LNK+ +P
Sbjct: 272 KALAVASAINGVGDVVLCTFLGYGIAGAAWATMVSQVVAAYMMMDALNKKGYSAFSFCVP 331
Query: 336 NMKNLH--FGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVWLSVSM 393
+ L FG L + ++ ++ V+ TL A G +AAHQ+ LQ++ ++
Sbjct: 332 SPSELLTIFG--LAAPVFI--TMMSKVLFYTLLVYFATSMGTNIIAAHQVMLQIYTMSTV 387
Query: 394 LADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILG 441
+ + + Q+ + + N K LK+ + G TL +++G
Sbjct: 388 WGEPLSQTAQSFMPELLFGINRNLPK--ARVLLKSLVIIGATLGIVVG 433
>sp|Q945F0|EDS5_ARATH Enhanced disease susceptibility 5 OS=Arabidopsis thaliana GN=EDS5
PE=2 SV=1
Length = 543
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 150/358 (41%), Gaps = 42/358 (11%)
Query: 93 SQSCVQNVQLDLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSK 152
QS + ++ +++ + PA+ P+ L++T IG+ +ELA+ G T + + +S
Sbjct: 92 KQSIWEQMK-EIVKFTGPAMGMWICGPLMSLIDTVVIGQGSSIELAALGPGTVLCDHMSY 150
Query: 153 VFNIPLLSVATS-FVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALVLA 211
VF LSVATS VA +++ K++ S +
Sbjct: 151 VFM--FLSVATSNMVATSLAKQDKKEAQHQIS--------------------------VL 182
Query: 212 LTIGILEALAMYFGSGLF--LDIMGISSASSMRI--PAQRFLSLRAIGAPAVVLSLAIQG 267
L IG++ L M + LF + + ++ I A +++ +R + P +++ L Q
Sbjct: 183 LFIGLVCGLMMLLLTRLFGPWAVTAFTRGKNIEIVPAANKYIQIRGLAWPFILVGLVAQS 242
Query: 268 IFRGFKDTRTPVFCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLN 327
G K++ P+ L +L + G+ GAA +T SQ + +M+ LN
Sbjct: 243 ASLGMKNSWGPLKALAAATIINGLGDTILCLFLGQGIAGAAWATTASQIVSAYMMMDSLN 302
Query: 328 KRTI----LSIPNMKNLHFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQI 383
K +IP+ + L L + ++ + + + A G +AAHQ+
Sbjct: 303 KEGYNAYSFAIPSPQELWKISALAAPVFI--SIFSKIAFYSFIIYCATSMGTHVLAAHQV 360
Query: 384 CLQVWLSVSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILG 441
Q + ++ + + + Q+ + + N K T LK+ + G TL ++LG
Sbjct: 361 MAQTYRMCNVWGEPLSQTAQSFMPEMLYGANRNLPKART--LLKSLMIIGATLGLVLG 416
>sp|Q58119|Y709_METJA Uncharacterized transporter MJ0709 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0709 PE=3 SV=1
Length = 450
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 178/405 (43%), Gaps = 65/405 (16%)
Query: 98 QNVQLDL-------IMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNIL 150
+NV++ L I +S P I IE + L+++ ++ LG LA+ G S F IL
Sbjct: 2 KNVEILLDDPKKAVIEVSKPIIVATFIESIYSLVDSIWVSGLGADALAAVGAS---FPIL 58
Query: 151 SKVFNIPL-LSVATSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALV 209
++ + LS+ S I+R + ++ D+ + A++
Sbjct: 59 ISIYAVSWGLSIGIS---SGIARRVGAKNKEEA----------DKVANH--------AII 97
Query: 210 LALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIF 269
LAL GIL +A+Y +MG + + A ++ S+ +G + A+ GIF
Sbjct: 98 LALIAGILYIIAVYPNLDTLFSLMG--TYGDCKSLAIKYSSILVLGTVIFTICDALYGIF 155
Query: 270 RGFKDTRTPVFCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIW--YLN 327
RG +T+ + +G + + + P+ +Y LG++GA+ +T+ + + L++ + ++
Sbjct: 156 RGEGNTKIVMIASVIGTLTNIILDPIFIYMLNLGISGASYATLIAIIISLLILAYELFIK 215
Query: 328 KRTILSI------PNMKNLHFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAH 381
K +++ P++K + D +R G +A++ IT++ S + M
Sbjct: 216 KSCYVTVKLSKFKPDLKII--ADLIRVG------IPSALIEITVAVSFFIMTSIIMMVGD 267
Query: 382 QICLQVWLS---------VSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFT 432
L V+ + ML A A+ ++I +++ + +K + +K G+
Sbjct: 268 SRGLAVYTGALRITEFGFIPMLGLASGAT--SVIGATYGARSFEKLKTAYFYTIKIGVLM 325
Query: 433 GVTLAVILGASFNYLATLFTSDTQVLGI----VRSGLLVRVYLLL 473
+ + ++ LA LFT +GI V++ +V +YLL
Sbjct: 326 EIIIVALIMLLSPILAYLFTYTKTSMGIHEELVKALRIVPLYLLF 370
>sp|Q9WZS2|NORM_THEMA Probable multidrug resistance protein NorM OS=Thermotoga maritima
(strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
GN=norM PE=3 SV=1
Length = 464
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 162/377 (42%), Gaps = 37/377 (9%)
Query: 94 QSCVQNVQLDLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKV 153
+ V ++ +LI L+LPA+ ++ + + +TA++G ++ G+S +F ++ V
Sbjct: 12 KEEVPEIRKELIKLALPAMGENVLQMLFGMADTAFLGHYSWKAMSGVGLSNQVFWVVQVV 71
Query: 154 FNIPLLSVATSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALVLALT 213
+A S + ++ +++ + + + ++++N ++ T ++L
Sbjct: 72 L------IAAS-MGATVTIANAIGAGNRKAVRSLAWNSV--------FLAIFTGVILTAL 116
Query: 214 IGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFK 273
+ + L +F ++ G +S A+ +L + G+ + + RG
Sbjct: 117 TPLSDVLI-----NIFPNLEGEIESS-----AKEYLKVILSGSMGFSIMAVFSAMLRGAG 166
Query: 274 DTRTPVFCLGLGNFSAVFM-FPMLMYYF---KLGVTGAAISTVGSQYMVTLLMIWYLNKR 329
DTRTP+ GL NF +F+ + M+ F ++GV GAA++T+ S+++ ++ + + KR
Sbjct: 167 DTRTPMIVTGLTNFLNIFLDYAMIFGKFGFPEMGVRGAAVATILSRFVGAGILTYVIFKR 226
Query: 330 TILSI------PNMKNLHFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQI 383
+ P + + LR G + + +I GA A A H+I
Sbjct: 227 EEFQLRKGLVPPKWSSQK--EILRVGFPTAIENFVFSTGVLMFANILLIAGAEAYAGHRI 284
Query: 384 CLQVWLSVSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGAS 443
+ V M A + + L+ G+ V + L VT+ +I+
Sbjct: 285 GINVESLSFMPAFGISVAITTLVGRYNGMGNKEHVLGVIRQGWILSLLFQVTVGIIIFLF 344
Query: 444 FNYLATLFTSDTQVLGI 460
L +FTSD Q++ I
Sbjct: 345 PEPLIRIFTSDPQIIEI 361
>sp|P45272|HMRM_HAEIN Multidrug resistance protein HmrM OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hmrM PE=3 SV=1
Length = 464
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 152/376 (40%), Gaps = 54/376 (14%)
Query: 103 DLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVA 162
LI +SLP + Q + L +T GR+ ++A+ + SI+ +PL+
Sbjct: 15 KLIKISLPILLAQIAQNSMGLADTIMAGRVSSTDMAAISIGASIW--------MPLM--- 63
Query: 163 TSFVAEDISRSSSKDSTSDSSCPNVSY-NGCDESTDRKLLPSVSTALVLALTIGILEALA 221
F + + + P +SY NG + ++ V + L L + I L
Sbjct: 64 --FFGQGLLLALP---------PTISYLNGSGQ--HHRIAHQVRQGIWLVLGVSIPLGLL 110
Query: 222 MYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFC 281
+YF + + + S M A+ +L G PA ++ + + + G + T+ +
Sbjct: 111 IYFCE---IPLQYMQMESKMSDLARDYLHAMLWGLPAYLMLINFRCLNDGIEKTKPAMVI 167
Query: 282 LGLG---NFSAVFMFPMLMYYFKLGV-----TGAAISTVGSQYMVTLLMIWYLNKRT--- 330
LG N ++F Y K G+ G I+T + + L+MI+Y T
Sbjct: 168 TFLGLLINIPLNYIF----IYGKFGMPAFGAVGCGIATAIVNWAMCLMMIFYSYTNTQER 223
Query: 331 -------ILSIPNMKNLHFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQI 383
++ +PN K L LR G + V L++ + + GA +A+HQI
Sbjct: 224 SLKVFSQLIEMPNPKTLK--KLLRLGLPIAIAICCEVALYALTSLMLSPLGATIVASHQI 281
Query: 384 CLQVWLSVSMLADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGAS 443
L + M + + L+ + G K+I + AL GL + A+I
Sbjct: 282 TLNTSSFIFMFPMSIGMATTILVGQALGAGSPQNAKKIGYAALLLGLTVTIVTALI-TIF 340
Query: 444 FNY-LATLFTSDTQVL 458
F Y +A++F +D V+
Sbjct: 341 FRYEIASIFVTDEIVI 356
>sp|P54181|YPNP_BACSU Probable multidrug resistance protein YpnP OS=Bacillus subtilis
(strain 168) GN=ypnP PE=3 SV=1
Length = 445
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 109/251 (43%), Gaps = 38/251 (15%)
Query: 99 NVQLDLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGV--STSIFNILSKVFNI 156
NV L++ S+P + G A++ Q +++ +IG L + A ST + +LS +
Sbjct: 10 NVLKQLVLFSMPIMLGNALQVSFQFIDSLWIGNLLGAKALGAAAVSSTIVLTVLSFILG- 68
Query: 157 PLLSVATSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALVLALTIGI 216
L+ AT + +S+ KD D K + S A V+ LT
Sbjct: 69 --LNNATLTI---LSQQKGKD-------------------DIKGMASYINAFVVLLT--- 101
Query: 217 LEALAMYFGSGLFLDIMGI----SSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGF 272
L++ FG+ F + + SM A+ +L ++ IG + I + R
Sbjct: 102 --GLSIGFGAAGFFLSELLLRLLKTPESMIPLAETYLQIQFIGILFLFGYNFISTVLRAL 159
Query: 273 KDTRTPVFCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTIL 332
D++TP+ + + P+ + F++G+ GAA ST+ SQ + L ++Y+ K ++
Sbjct: 160 GDSKTPLRFIAFAVVLNTVLAPLFISVFRMGIAGAAYSTILSQGIAFLYGLFYVIKHKLV 219
Query: 333 --SIPNMKNLH 341
SIP M
Sbjct: 220 PFSIPRMPKWE 230
>sp|P28303|DINF_ECOLI DNA-damage-inducible protein F OS=Escherichia coli (strain K12)
GN=dinF PE=2 SV=1
Length = 459
Score = 40.4 bits (93), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 117/250 (46%), Gaps = 8/250 (3%)
Query: 228 LFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCLGLGNF 287
L L I+G S A + A+RFL +R + APA + +L + G G + R PV L +GN
Sbjct: 131 LALHIVGGSEAVLEQ--ARRFLEIRWLSAPASLANLVLLGWLLGVQYARAPVILLVVGNI 188
Query: 288 SAVFMFPMLMYYFKLGVTGAAISTVGSQY---MVTLLMIWYLNKRTILSIPNMKNLHFGD 344
+ + L+ + V GAA++TV ++Y ++ LLM+ + K +S +K G+
Sbjct: 189 LNIVLDVWLVMGLHMNVQGAALATVIAEYATLLIGLLMVRKILKLRGISGEMLKTAWRGN 248
Query: 345 YLRSGGY---LLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVWLSVSMLADAQAAS 401
+ R ++ R+L + T + AR G+ +A + + + + + D A +
Sbjct: 249 FRRLLALNRDIMLRSLLLQLCFGAITVLGARLGSDIIAVNAVLMTLLTFTAYALDGFAYA 308
Query: 402 GQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATLFTSDTQVLGIV 461
+A ++ D + + ++ A + + +V+ + ++ L TS TQ+ +
Sbjct: 309 VEAHSGQAYGARDGSQLLDVWRAACRQSGIVALLFSVVYLLAGEHIIALLTSLTQIQQLA 368
Query: 462 RSGLLVRVYL 471
L+ +V L
Sbjct: 369 DRYLIWQVIL 378
>sp|Q9I3Y3|PMPM_PSEAE Multidrug resistance protein PmpM OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=pmpM
PE=3 SV=1
Length = 477
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 96/234 (41%), Gaps = 31/234 (13%)
Query: 103 DLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSIFNILSKVFNIPLLSVA 162
+L+ L+ P + Q ++ GR P +LA+ + SI+ IP+ +
Sbjct: 20 ELLTLAAPIMIAQLATTAMGFVDAVMAGRASPHDLAAVALGNSIW--------IPMFLLM 71
Query: 163 TSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVSTALVLALTIGILEALAM 222
T + ++ + + D P P V AL LAL IG L +
Sbjct: 72 TGTLLATTAKVAQRHGAGDQ--PGTG-------------PLVRQALWLALLIGPLSGAVL 116
Query: 223 YFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCL 282
++ S L +M + + P+ +L A+G PA L ++ G TR P L
Sbjct: 117 WWLSEPILGLMKVRP--ELIGPSLLYLKGIALGFPAAALYHVLRCYTNGLGRTR-PSMVL 173
Query: 283 GLGNF--SAVFMFPMLMYYF---KLGVTGAAISTVGSQYMVTLLMIWYLNKRTI 331
G+G + + ++ +F K+G G +T + + L M++++NK +I
Sbjct: 174 GIGGLLLNIPINYALIYGHFGMPKMGGPGCGWATGSVMWFMFLGMLFWVNKASI 227
>sp|O34474|YOEA_BACSU Probable multidrug resistance protein YoeA OS=Bacillus subtilis
(strain 168) GN=yoeA PE=3 SV=2
Length = 463
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Query: 197 DRKLLPSVSTALVLALTIGILEALAMYFGSGLFLDIMGISSASSMRIP-AQRFLSLRAIG 255
+ +L V T L +G++ A+ GS LDI+ + I + + +
Sbjct: 93 EERLKAVVGTTLTFTFLLGVVLAV---IGSIFTLDILRLMGTPENVIHVSANYARILFYA 149
Query: 256 APAVVLSLAIQGIFRGFKDTRTPVFCLGLGNFSAVFMFPML---MYYF-KLGVTGAAIST 311
P + L A RG D++TP + L + + + P+L M+ F KLG+ G+A +T
Sbjct: 150 MPFMFLYFAYTTFLRGTGDSKTPFYTLIVSTVINIALLPVLILGMFGFPKLGIYGSAYAT 209
Query: 312 VGSQYMVTLLMIWYLNKR 329
V S L+++ YL KR
Sbjct: 210 VISTIATFLVLMVYLRKR 227
>sp|Q73BB8|NORM_BACC1 Probable multidrug resistance protein NorM OS=Bacillus cereus
(strain ATCC 10987) GN=norM PE=3 SV=1
Length = 454
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 169/419 (40%), Gaps = 91/419 (21%)
Query: 87 RKSAATSQSCVQNVQLDLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSI 146
++++ SQ Q ++L P Q +T G P++LA + TSI
Sbjct: 2 KETSTFSQKLKQ-----FVLLFFPIFITQMSLFAMSFFDTTMSGHASPIDLAGVAIGTSI 56
Query: 147 FNILSKVFNIPLLSVATSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVST 206
+ +S +L T VA+ + +D P V V
Sbjct: 57 WIPVSTGLT-GILMATTPIVAQLVGSKKKED------VPQV----------------VIQ 93
Query: 207 ALVLALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQ 266
A+ LA+ + L +F L+ M + RI AQ FLS+ AIG ++ L
Sbjct: 94 AVYLAICASFVVMLIGFFAVTPILNGMRLEEPVE-RIAAQ-FLSIIAIG----IIPLFTY 147
Query: 267 GIFRGFKD----TRT---------PV-----FCLGLGNFSAVFMFPMLMYYFKLGVTGAA 308
+ RGF D TRT P+ + L G+F FP KLG GAA
Sbjct: 148 TVLRGFIDALGKTRTTMIITLLSLPINVILNYVLIFGHFG----FP------KLGGVGAA 197
Query: 309 ISTVGSQYMVTLLMIWYL-NKRTILSIPNMKNLH------FGDYLRSG---GY--LLGRT 356
I++ + + + ++ + + K S K L+ + ++L+ G G+ +
Sbjct: 198 IASTATYWCILIITVMIIRTKEPFASFHIFKQLYRPSLSSWKEFLKLGVPIGFAIFFETS 257
Query: 357 LAAVMTITLS----TSIAARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIASSFAK 412
+ A +T+ +S T+IAA Q A+ A+ L ++ L+ A A + IA F
Sbjct: 258 IFAAVTLMMSNFSTTTIAAHQAAMNFASL-------LYMTPLSLAMAMT----IAVGFEV 306
Query: 413 G--DYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATLFTSDTQVLGIVRSGLLVRV 469
G YN K+ + L + +++L + +A+++T+D QV + + L+ +
Sbjct: 307 GAKRYNNAKQYGFIGIGLALAFALLYSILLYFFDDEIASIYTTDIQVHHLAKEFLIFAI 365
>sp|Q65SY9|NORM_MANSM Probable multidrug resistance protein NorM OS=Mannheimia
succiniciproducens (strain MBEL55E) GN=norM PE=3 SV=1
Length = 465
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 26/231 (11%)
Query: 247 RFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCLGLG---NFSAVFMFPMLMYYFKLG 303
++L G PA +L + + + G T+ + +G N ++F Y KLG
Sbjct: 134 KYLHAMLFGLPAYLLLVNFRCLNDGLAKTKPAMIITLIGLLLNIPLNYIF----IYGKLG 189
Query: 304 V-----TGAAISTVGSQYMVTLLMIWYL----NKR------TILSIPNMKNLHFGDYLRS 348
V G I+T +++ +LMI Y N+R I+ +PN L +
Sbjct: 190 VPAFGAVGCGIATTIVNWIMCILMISYTKSARNQRDLKVFENIIELPNPATLK--KLFKL 247
Query: 349 GGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIAS 408
G + + V L++ + + G A+A+HQI L + ML + + L+
Sbjct: 248 GLPIAIAICSEVALFALTSLLLSPLGTNAVASHQIALNTSSFIFMLPMSLGMATTILVGQ 307
Query: 409 SFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNY-LATLFTSDTQVL 458
S + K+I++ AL GL T TL L Y +A +F DT+V+
Sbjct: 308 SLGERSPLKAKDISYVALFIGLATA-TLTAFLTVVLRYQIAGIFVKDTEVI 357
>sp|Q6HLG9|NORM_BACHK Probable multidrug resistance protein NorM OS=Bacillus
thuringiensis subsp. konkukian (strain 97-27) GN=norM
PE=3 SV=1
Length = 453
Score = 36.6 bits (83), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 117/264 (44%), Gaps = 62/264 (23%)
Query: 242 RIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKD----TRT---------PV-----FCLG 283
RI AQ FLS+ AIG ++ L + RGF D TRT P+ + L
Sbjct: 128 RIAAQ-FLSIIAIG----IIPLFTYTVLRGFIDALGKTRTTMIITLLSLPINVVLNYVLI 182
Query: 284 LGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYL-NKRTILSIPNMKNLH- 341
GNF FP KLG GAAI++ + + + ++ + + K S K L+
Sbjct: 183 FGNFG----FP------KLGGVGAAIASAATYWCILIITVMIIRTKEPFASFNIFKQLYR 232
Query: 342 -----FGDYLRSG---GY--LLGRTLAAVMTITLS----TSIAARQGALAMAAHQICLQV 387
+ ++L+ G G+ ++ A +T+ +S T+IAA Q A+ A+
Sbjct: 233 PSLSSWKEFLKLGVPIGFAIFFETSIFAAVTLMMSNFSTTTIAAHQAAMNFASL------ 286
Query: 388 WLSVSMLADAQAASGQALIASSFAKG--DYNTVKEITHFALKTGLFTGVTLAVILGASFN 445
L ++ L+ A A + IA F G YN K+ + L + +++L +
Sbjct: 287 -LYMTPLSLAMAMT----IAVGFEVGAKRYNNAKQYGFIGIGLALAFALLYSILLYFFDD 341
Query: 446 YLATLFTSDTQVLGIVRSGLLVRV 469
+A+++T+D QV + + L+ +
Sbjct: 342 EIASIYTTDIQVHHLAKEFLIFAI 365
>sp|O34816|YKUD_BACSU Putative L,D-transpeptidase YkuD OS=Bacillus subtilis (strain 168)
GN=ykuD PE=1 SV=1
Length = 164
Score = 36.6 bits (83), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 25 NKMGKAFPIY--SMVIAPPNCSFGVINRAKNGFNPAIMCCGSVSDQHASDYITINPSGVG 82
N++ K +PI ++ P F +INR +N P S+S QH + T NP+ +G
Sbjct: 73 NRVMKTYPIAVGKILTQTPTGEFYIINRQRNPGGPFGAYWLSLSKQHYGIHGTNNPASIG 132
Query: 83 ESESRKSAATSQSCVQNVQLDLIMLS 108
+ A S+ C++ D+I L+
Sbjct: 133 K-------AVSKGCIRMHNKDVIELA 151
>sp|Q81T85|NORM_BACAN Probable multidrug resistance protein NorM OS=Bacillus anthracis
GN=norM PE=3 SV=1
Length = 453
Score = 36.6 bits (83), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 169/419 (40%), Gaps = 91/419 (21%)
Query: 87 RKSAATSQSCVQNVQLDLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGVSTSI 146
+++ + SQ Q ++L P Q +T G P++LA + TSI
Sbjct: 2 KETNSFSQKLKQ-----FVLLFFPIFVTQMSLFAMSFFDTTMSGHASPIDLAGVAIGTSI 56
Query: 147 FNILSKVFNIPLLSVATSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLPSVST 206
+ +S +L T VA+ + +D P+V +
Sbjct: 57 WIPVSTGLT-GILMATTPIVAQLVGSKKKED------VPHV----------------IIQ 93
Query: 207 ALVLALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQ 266
A+ LA+ + L F L+ M + RI AQ FLS+ AIG ++ L
Sbjct: 94 AVYLAICASFVVILIGLFTVTPILNGMRLEEPVE-RIAAQ-FLSIIAIG----IIPLFTY 147
Query: 267 GIFRGFKD----TRT---------PV-----FCLGLGNFSAVFMFPMLMYYFKLGVTGAA 308
+ RGF D TRT P+ + L GNF FP KLG GAA
Sbjct: 148 TVLRGFIDALGKTRTTMIITLLSLPINVVLNYVLIFGNFG----FP------KLGGVGAA 197
Query: 309 ISTVGSQYMVTLLMIWYL-NKRTILSIPNMKNLH------FGDYLRSG---GY--LLGRT 356
I++ + + + ++ + + K S K L+ + ++L+ G G+ +
Sbjct: 198 IASAATYWCILIITVMIIRTKEPFASFNIFKQLYRPSLSSWKEFLKLGVPIGFAIFFETS 257
Query: 357 LAAVMTITLS----TSIAARQGALAMAAHQICLQVWLSVSMLADAQAASGQALIASSFAK 412
+ A +T+ +S T+IAA Q A+ A+ L ++ L+ A A + IA F
Sbjct: 258 IFAAVTLMMSNFSTTTIAAHQAAMNFASL-------LYMTPLSLAMAMT----IAVGFEV 306
Query: 413 G--DYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATLFTSDTQVLGIVRSGLLVRV 469
G YN K+ + L + +++L + +A+++T+D QV + + L+ +
Sbjct: 307 GAKRYNNAKQYGFIGIGLALAFALLYSILLYFFDDEIASIYTTDIQVHHLAKEFLIFAI 365
>sp|Q9F5N7|NORM_BURVI Multidrug resistance protein NorM OS=Burkholderia vietnamiensis
GN=norM PE=3 SV=1
Length = 462
Score = 36.2 bits (82), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 127/310 (40%), Gaps = 28/310 (9%)
Query: 83 ESESRKSAATSQSCVQNVQLDLIMLSLPAIAGQAIEPMAQLMETAYIGRLGPLELASAGV 142
S ++AA S ++ +D L+ P Q + + +T +G LGP LA+ G+
Sbjct: 3 HSGLTRTAAAPPSLSRH-AVDTARLAAPLAIAQLSQMAMSVTDTVLLGSLGPDSLAAGGL 61
Query: 143 STSIFNILSKVFNIPLLSVATSFVAEDISRSSSKDSTSDSSCPNVSYNGCDESTDRKLLP 202
+ F ++ V + +S + ++ + ++ P++ + G S +
Sbjct: 62 GANFFFVIVTVLQ-------GVLSSVSVSVAHARGAQAEHRVPHIYWTGFVLSVLLAIPA 114
Query: 203 SVSTALVLALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLS 262
V+ +L L + E + G + I+ ++ S+ L AIGA +L
Sbjct: 115 VVALSLSEPLLLMFHEPPTLAQHVGEYTGILRFAALGSLIGVGLMRAFLPAIGAARRLLW 174
Query: 263 LAIQGIFRGFKDTRTPVFCLGLGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLM 322
++I GI G L G + P +LG G+A++T + ++ +
Sbjct: 175 VSIGGI--GVNA------VLNYGLIHGAYGLP------RLGFLGSAVATTITIWLTAFAL 220
Query: 323 IWYLNKRT----ILSIPNMKNLHFGDYLRSGGYLLGRTLAAVMTITLSTSI-AARQGALA 377
IW L+ R +S K G+ L G+ + T T+ L+T + GA A
Sbjct: 221 IWLLHGRARFRHFVSAARPKLPMMGE-LIGIGWPVAITYGVESTLFLATGLTVGVLGATA 279
Query: 378 MAAHQICLQV 387
+AAHQI L V
Sbjct: 280 LAAHQIALNV 289
>sp|P76352|YEEO_ECOLI Uncharacterized transporter YeeO OS=Escherichia coli (strain K12)
GN=yeeO PE=3 SV=3
Length = 495
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 187 VSYNGCDESTDRKLLPSVSTALVLALTIGILEALAMYFGSGLFLDIMGISSASSMRIPAQ 246
V+++ R + + + +++ L +L L +FG + +D + + + ++ A
Sbjct: 103 VAFSLGKRDRRRARVATRQSLVIMTLFAVLLATLIHHFGEQI-IDFVAGDATTEVKALAL 161
Query: 247 RFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCLGLGNFSAVFMFPMLMY----YFKL 302
+L L + PA ++L G RG +T+ P+ G N + + +L+Y + L
Sbjct: 162 TYLELTVLSYPAAAITLIGSGALRGAGNTKIPLLINGSLNILNIIISGILIYGLFSWPGL 221
Query: 303 GVTGAAISTVGSQYMVTLLMIWYL 326
G GA + S+Y+ + ++W L
Sbjct: 222 GFVGAGLGLTISRYIGAVAILWVL 245
>sp|Q58467|Y1068_METJA Uncharacterized membrane protein MJ1068 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1068 PE=3 SV=1
Length = 507
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 301 KLGVTGAAISTVGSQYMVTLLMIWYLNK 328
K G+ GAAI+TV +++ + IW+LNK
Sbjct: 405 KFGIIGAAITTVFGYFIMWIFQIWFLNK 432
>sp|Q8RG85|PYRDB_FUSNN Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit
OS=Fusobacterium nucleatum subsp. nucleatum (strain ATCC
25586 / CIP 101130 / JCM 8532 / LMG 13131) GN=pyrD PE=3
SV=1
Length = 304
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 11/89 (12%)
Query: 119 PMAQLMETAYIGRLGPLELASAGVSTSIFNILSKV--FNIPLL-SVATS------FVAED 169
P ++ ET+ G L + L + GV I N L K+ +++P++ +VA S +VA
Sbjct: 57 PTPRVAETSS-GMLNAIGLQNPGVDEIISNQLKKLEKYDVPIIANVAGSDIEDYVYVANK 115
Query: 170 ISRSSSKDSTS-DSSCPNVSYNGCDESTD 197
IS+S + + + SCPNV + G TD
Sbjct: 116 ISKSPNVKALELNISCPNVKHGGIQFGTD 144
>sp|Q5RFD2|S47A1_PONAB Multidrug and toxin extrusion protein 1 OS=Pongo abelii GN=SLC47A1
PE=2 SV=1
Length = 570
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/188 (17%), Positives = 80/188 (42%), Gaps = 37/188 (19%)
Query: 295 MLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTI---------------------LS 333
+ ++ LG G+A++ + SQY + LL+ +Y+ + + L+
Sbjct: 204 LFLHQLHLGAIGSALANLISQYTLALLLFFYILGKKLHQATWGGWSLECLQDWASFLHLA 263
Query: 334 IPNMKNLHFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVWLSVSM 393
+P+M L + Y +G L+ ++ G + + A I ++ + V M
Sbjct: 264 VPSMLML----CMEWWAYEVGSFLSGIL------------GMVELGAQSIVYELAIIVYM 307
Query: 394 LADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATLFTS 453
+ + + + ++ GD ++ + +L + V +V+L + +++ +FT+
Sbjct: 308 VPAGFSVAASVRVGNALGAGDMEQARKSSTVSLLITVLFAVAFSVLLLSCKDHVGYIFTT 367
Query: 454 DTQVLGIV 461
D ++ +V
Sbjct: 368 DRDIINLV 375
>sp|Q65K99|YKUD_BACLD Putative L,D-transpeptidase YkuD OS=Bacillus licheniformis (strain
DSM 13 / ATCC 14580) GN=BLi01617 PE=3 SV=1
Length = 165
Score = 33.5 bits (75), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 14 ITGTSFQRRAINKMGKAFPIY--SMVIAPPNCSFGVINRAKNGFNPAIMCCGSVSDQHAS 71
+ G + + +++ K +PI ++ P F ++NR N P S+S QH
Sbjct: 63 LNGRTLRLYERDRLVKTYPIAVGKILTQTPRGEFVIVNRQPNPGGPFGAYWLSLSKQHYG 122
Query: 72 DYITINPSGVGESESRKSAATSQSCVQNVQLDLIMLS 108
+ T NPS +G+ A S+ C++ D++ L+
Sbjct: 123 IHGTNNPSSIGK-------AVSRGCIRMHNRDVLELA 152
>sp|Q8K0H1|S47A1_MOUSE Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1
PE=1 SV=2
Length = 567
Score = 33.5 bits (75), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/188 (18%), Positives = 77/188 (40%), Gaps = 37/188 (19%)
Query: 295 MLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTI---------------------LS 333
+ +Y+ LGV G+A++ SQ+ + + + Y+ R + L+
Sbjct: 204 VFLYHLHLGVMGSALANTISQFALAIFLFLYILWRRLHQATWGGWSWECLQDWASFLRLA 263
Query: 334 IPNMKNLHFGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVWLSVSM 393
IP+M L + Y +G L+ ++ G + + A I ++ + V M
Sbjct: 264 IPSMLML----CIEWWAYEVGSFLSGIL------------GMVELGAQSITYELAIIVYM 307
Query: 394 LADAQAASGQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATLFTS 453
+ + + + ++ G+ + K+ + +L VT V+L + + +FT+
Sbjct: 308 IPSGFSVAANVRVGNALGAGNIDQAKKSSAISLIVTELFAVTFCVLLLGCKDLVGYIFTT 367
Query: 454 DTQVLGIV 461
D ++ +V
Sbjct: 368 DRDIVALV 375
>sp|A4IIS8|S47A1_XENTR Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis
GN=slc47a1 PE=2 SV=1
Length = 574
Score = 33.1 bits (74), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 74/180 (41%), Gaps = 6/180 (3%)
Query: 287 FSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLNKRTILS-----IPNMKNLH 341
F+A+F + +L+Y LGV G+A + SQ++ +L+ Y+ R + +
Sbjct: 211 FNALFNY-ILLYVLGLGVMGSACANTVSQFIQMILLFLYIVWRRLYADTWGGWSQACFEE 269
Query: 342 FGDYLRSGGYLLGRTLAAVMTITLSTSIAARQGALAMAAHQICLQVWLSVSMLADAQAAS 401
+G ++R + +S +A G + +AA I QV + V ++ +
Sbjct: 270 WGAFIRLAVASMLMLCIEWWAFEISMFLAGVLGMVDLAAQAIIYQVAIVVYLIPLGLCIA 329
Query: 402 GQALIASSFAKGDYNTVKEITHFALKTGLFTGVTLAVILGASFNYLATLFTSDTQVLGIV 461
G + G+ K L + ++L + +A +FTSD ++ +V
Sbjct: 330 GSIRVGHGLGAGNTEQAKRSALVVLCMTELCALLSGILLATLKDVVAYIFTSDPNIVALV 389
>sp|Q5R7G6|PEPL1_PONAB Probable aminopeptidase NPEPL1 OS=Pongo abelii GN=NPEPL1 PE=3 SV=2
Length = 523
Score = 33.1 bits (74), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 223 YFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCL 282
+ G G+ D G+S +P + R G A VL I +GFKD VFCL
Sbjct: 257 WVGKGIVYDTGGLSIKGKTTMPGMK----RDCGGAAAVLGAFRAAIKQGFKDNLHAVFCL 312
>sp|Q6NSR8|PEPL1_MOUSE Probable aminopeptidase NPEPL1 OS=Mus musculus GN=Npepl1 PE=2 SV=1
Length = 524
Score = 33.1 bits (74), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 223 YFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCL 282
+ G G+ D G+S +P + R G A VL I +GFKD VFCL
Sbjct: 257 WVGKGIVYDTGGLSIKGKTTMPGMK----RDCGGAAAVLGAFRAAIKQGFKDNLHAVFCL 312
>sp|Q8NDH3|PEPL1_HUMAN Probable aminopeptidase NPEPL1 OS=Homo sapiens GN=NPEPL1 PE=1 SV=3
Length = 523
Score = 33.1 bits (74), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 223 YFGSGLFLDIMGISSASSMRIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKDTRTPVFCL 282
+ G G+ D G+S +P + R G A VL I +GFKD VFCL
Sbjct: 257 WVGKGIVYDTGGLSIKGKTTMPGMK----RDCGGAAAVLGAFRAAIKQGFKDNLHAVFCL 312
>sp|Q63DZ4|NORM_BACCZ Probable multidrug resistance protein NorM OS=Bacillus cereus
(strain ZK / E33L) GN=norM PE=3 SV=1
Length = 453
Score = 32.7 bits (73), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 118/264 (44%), Gaps = 62/264 (23%)
Query: 242 RIPAQRFLSLRAIGAPAVVLSLAIQGIFRGFKD----TRT---------PV-----FCLG 283
RI AQ FLS+ AIG ++ L + RGF D TRT P+ + L
Sbjct: 128 RIAAQ-FLSIIAIG----IIPLFTYTVLRGFIDALGKTRTTMIITLLSLPINVILNYLLI 182
Query: 284 LGNFSAVFMFPMLMYYFKLGVTGAAISTVGSQYMVTLLMIWYLN-KRTILSIPNMKNLH- 341
GNF FP KLG GAAI++ + + + ++ + ++ K S K+L+
Sbjct: 183 FGNFG----FP------KLGGVGAAIASTATYWCILIITVIIIHTKEPFASFNIFKHLYR 232
Query: 342 -----FGDYLRSG---GY--LLGRTLAAVMTITLS----TSIAARQGALAMAAHQICLQV 387
+ +L+ G G+ ++ A +T+ +S T+IAA Q A+ A+
Sbjct: 233 PSLSSWKAFLKLGVPIGFAIFFETSIFAAVTLMMSNFSTTTIAAHQAAMNFASL------ 286
Query: 388 WLSVSMLADAQAASGQALIASSFAKG--DYNTVKEITHFALKTGLFTGVTLAVILGASFN 445
L ++ L+ A A + IA F G YN K+ + L + +++L N
Sbjct: 287 -LYMTPLSLAMAMT----IAVGFEVGAKRYNNAKQYGFIGIGLALAFALLYSILLYFFDN 341
Query: 446 YLATLFTSDTQVLGIVRSGLLVRV 469
+A+++T+D QV + + L+ +
Sbjct: 342 EIASIYTTDIQVHHLAKEFLIFAI 365
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.135 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 150,064,897
Number of Sequences: 539616
Number of extensions: 5640182
Number of successful extensions: 20448
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 20314
Number of HSP's gapped (non-prelim): 215
length of query: 478
length of database: 191,569,459
effective HSP length: 121
effective length of query: 357
effective length of database: 126,275,923
effective search space: 45080504511
effective search space used: 45080504511
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 63 (28.9 bits)