BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>011773
MGNQDIAPLLDRTESGRVGNLERFSHYVARQMGFDDTNECPQLCKLAYEYLKKSKGCEDN
IYEYFSKEAEPESLYVKLVEEFDRCILSYFTFHWSHASLMISQVLSVESEKKTKLKDFIM
AATRKQRFEKVTKDLKMKRVFSTLVEEMKAIRREGESHCTDVMVPAALSERSPVLLLMGG
GMGAGKSTVLKDIMKESFWSGAATNAVVVEADAFKETDVIYRALSSKGHHDDMLQTAELV
HQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVEQTIAMARNVHKSRYRMGVGYKVNED
GTVIENYWEQVKEGEEDYQQKENRQVFSRKPYRIELVGVVCDAYLAVVRGIRRAIMMKRA
VRVNSQLKSHKRFANAFRNYCELVDNARLYCTNAVGGPPRLIAWKDGDSNLLVDSDEIKC
LTRVGSLNADADSVYELHSEPNPIFEPGSVWNDIVLCPSRAGLQLELRTSIKKIENY

High Scoring Gene Products

Symbol, full name Information P value
AT1G04280 protein from Arabidopsis thaliana 7.7e-174
AT2G30630 protein from Arabidopsis thaliana 1.8e-158

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  011773
        (477 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2018304 - symbol:AT1G04280 species:3702 "Arabi...  1689  7.7e-174  1
TAIR|locus:2054497 - symbol:AT2G30630 species:3702 "Arabi...  1544  1.8e-158  1


>TAIR|locus:2018304 [details] [associations]
            symbol:AT1G04280 species:3702 "Arabidopsis thaliana"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0016301 "kinase activity" evidence=IEA]
            [GO:0016020 "membrane" evidence=IDA] InterPro:IPR010488
            Pfam:PF06414 EMBL:CP002684 GO:GO:0005524 GO:GO:0016020
            GO:GO:0016310 GO:GO:0016301 EMBL:AK227002 IPI:IPI00549100
            RefSeq:NP_171924.2 UniGene:At.42464 ProteinModelPortal:Q0WUY1
            SMR:Q0WUY1 STRING:Q0WUY1 PRIDE:Q0WUY1 EnsemblPlants:AT1G04280.1
            GeneID:839555 KEGG:ath:AT1G04280 TAIR:At1g04280
            HOGENOM:HOG000238325 InParanoid:Q0WUY1 OMA:RAISSMG PhylomeDB:Q0WUY1
            ProtClustDB:CLSN2683120 Genevestigator:Q0WUY1 Uniprot:Q0WUY1
        Length = 534

 Score = 1689 (599.6 bits), Expect = 7.7e-174, P = 7.7e-174
 Identities = 333/479 (69%), Positives = 389/479 (81%)

Query:     1 MGNQD--IAPLLDRTESGRVGNLERFSHYVARQMGFDDTNECPQLCKLAYEYLKKSKGCE 58
             MG +D  IAPL++R +SGR  NLERFSHYVARQ+GF+D NE PQLCKLA  YL K+KG +
Sbjct:    55 MGYKDVKIAPLIERKDSGRRSNLERFSHYVARQLGFEDPNEYPQLCKLANGYLLKTKGYD 114

Query:    59 DNIYEYFSKEAEPESLYVKLVEEFDRCILSYFTFHWSHASLMISQVLSVESEKKT-KLKD 117
             +N+ EY   EAE +SLYV L+EEFDRCIL+YF+F+W+ +S +ISQ LS ES++K  KLKD
Sbjct:   115 ENVDEYLENEAERDSLYVHLLEEFDRCILTYFSFNWTQSSNLISQALSDESDQKVPKLKD 174

Query:   118 FIMAATRKQRFEKVTKDLKMKRVFSTLVEEMKAIRR-EGESHCTDVMVPAALSERSPVXX 176
             F+MAATRKQRFE+VTKDLK+KRV STLVEEM+ I     E HCT+VM P A ++RSPV  
Sbjct:   175 FVMAATRKQRFERVTKDLKVKRVISTLVEEMRVIGSGSSEPHCTEVMSPVAHNKRSPVLL 234

Query:   177 XXXXXXXXXKSTVLKDIMKESFWSGAATNAVVVEADAFKETDVIYRALSSKGHHDDMLQT 236
                      KSTVLKDI  ESFWS A  +AVV+EADAFKETDVIYRALSS+GHHDDMLQT
Sbjct:   235 LMGGGMGAGKSTVLKDIFLESFWSEAQADAVVIEADAFKETDVIYRALSSRGHHDDMLQT 294

Query:   237 AELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVEQTIAMARNVHKSRYRMGVGYK 296
             AELVHQSSTDAASSLLVTALN+GRDVIMDGTLSW PFVEQ I MARNVHK +YRMG GYK
Sbjct:   295 AELVHQSSTDAASSLLVTALNDGRDVIMDGTLSWEPFVEQMIEMARNVHKQKYRMGEGYK 354

Query:   297 VNEDGTVIENYWEQVKEGEEDYQQKENRQVFSRKPYRIELVGVVCDAYLAVVRGIRRAIM 356
             V+E+GT+ E YWE     EE+ + KEN +  + KPYRIELVGVVCDAYLAV RGIRRA+M
Sbjct:   355 VSEEGTITEKYWE-----EEEEETKENGKQQNLKPYRIELVGVVCDAYLAVARGIRRALM 409

Query:   357 MKRAVRVNSQLKSHKRFANAFRNYCELVDNARLYCTNAVGGPPRLIAWKDGDSNLLVDSD 416
             +KRAVRV  QL SHKRFANAF  YCELVDNARLYCTNAVGGPPRLIAWKDG+S LLVD +
Sbjct:   410 VKRAVRVKPQLNSHKRFANAFPKYCELVDNARLYCTNAVGGPPRLIAWKDGNSKLLVDPE 469

Query:   417 EIKCLTRVGSLNADADSVYELHSEPNPIFEPGSVWNDIVLCPSRAGLQLELRTSIKKIE 475
             +I CL RV SLN DA+S+YEL+ +P+ + +PGSVWND+VL PSR  +Q EL  +I++IE
Sbjct:   470 DIDCLKRVSSLNPDAESIYELYPDPSQLSKPGSVWNDVVLVPSRPKVQKELSDAIRRIE 528


>TAIR|locus:2054497 [details] [associations]
            symbol:AT2G30630 species:3702 "Arabidopsis thaliana"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0016301 "kinase activity" evidence=IEA]
            InterPro:IPR010488 Pfam:PF06414 GO:GO:0005524 EMBL:CP002685
            GO:GO:0016301 IPI:IPI00522740 RefSeq:NP_973567.1 UniGene:At.38338
            ProteinModelPortal:F4INW4 PRIDE:F4INW4 EnsemblPlants:AT2G30630.2
            GeneID:817613 KEGG:ath:AT2G30630 OMA:EENIFAF Uniprot:F4INW4
        Length = 552

 Score = 1544 (548.6 bits), Expect = 1.8e-158, P = 1.8e-158
 Identities = 311/480 (64%), Positives = 365/480 (76%)

Query:    21 LERFSHYVARQMGFDDTNECPQLCKLAYEYLKKSKGCEDNIYEYFSKEAEPESLYVKLVE 80
             LERFSHYV RQMGF D  ECP LCKLA EY++KS  CE++IY +FS+E   +SL++KLVE
Sbjct:    72 LERFSHYVVRQMGFKDRRECPHLCKLANEYIRKSGSCEEDIYSFFSEEPGADSLFIKLVE 131

Query:    81 EFDRCILSYFTFHWSHASLMISQV---------------------LSVESEKKTKLKDFI 119
             EF+RCILSYF +HWSHA LMISQV                     LS + E K KLK  +
Sbjct:   132 EFERCILSYFAYHWSHADLMISQVTNKLSLSLLCYITNRPKTFQILSADVEPKKKLKHIV 191

Query:   120 MAATRKQRFEKVTKDLKMKRVFSTLVEEMKA--IRREGESHCTDVMVPAALSERSPVXXX 177
             MAATR+QRFE+VTK+LK+ RVF+TLVEEMKA  I    +S CT+VM P A  +RSPV   
Sbjct:   192 MAATREQRFERVTKNLKVARVFNTLVEEMKAMGIASVDDSECTEVMAPVAHKDRSPVLLL 251

Query:   178 XXXXXXXXKSTVLKDIMKESFWSGAATNAVVVEADAFKETDVIYRALSSKGHHDDMLQTA 237
                     KSTVLKDI+KE FW+GA  +AVV+EADAFKE+DVIYRALS++GH D M++TA
Sbjct:   252 MGGGMGAGKSTVLKDILKEPFWAGA--DAVVIEADAFKESDVIYRALSARGHVD-MIKTA 308

Query:   238 ELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVEQTIAMARNVHKSRYRMGVGYKV 297
             E VHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFV QTI MARNVH+ RYRMG GYKV
Sbjct:   309 EFVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMARNVHRHRYRMGAGYKV 368

Query:   298 NEDGTVIENYWEQVKEGEEDYQQKENRQVFSRKPYRIELVGVVCDAYLAVVRGIRRAIMM 357
              E+G VIENYWE++  GE    Q++ R+   RKPYRIELVGVVCDAYLAV+RGIRRAIM 
Sbjct:   369 GENGDVIENYWERI--GERQQLQEDGRE---RKPYRIELVGVVCDAYLAVIRGIRRAIMC 423

Query:   358 KRAVRVNSQLKSHKRFANAFRNYCELVDNARLYCTNAVGGPPRLIAWKDGDSNLLVDSDE 417
             +RAVRV SQL+SHKRFANAF  YC LVDNARLYCTNA+ G P+LI WK+ +  LLVD +E
Sbjct:   424 RRAVRVRSQLRSHKRFANAFLTYCNLVDNARLYCTNALEGSPKLIGWKEKEKTLLVDPEE 483

Query:   418 IKCLTRVGSLNADADSVYELHSEPNPIFEPGSVWNDIVLCPSRAGLQLELRTSIKKIENY 477
             I CL  VG LN +ADS+YEL+  PNP  E GS+W DIVL PSR  +Q EL+ SI+K+E +
Sbjct:   484 IDCLKNVGRLNENADSIYELYRNPNPACEAGSIWKDIVLSPSRFNIQQELKYSIQKVERF 543


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.132   0.385    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      477       466   0.00097  118 3  11 22  0.40    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  289 KB (2151 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  39.29u 0.12s 39.41t   Elapsed:  00:00:02
  Total cpu time:  39.29u 0.12s 39.41t   Elapsed:  00:00:02
  Start:  Sat May 11 12:43:16 2013   End:  Sat May 11 12:43:18 2013

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