BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 011774
         (477 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q2V897|TLR2_BOSTR Toll-like receptor 2 OS=Boselaphus tragocamelus GN=TLR2 PE=2 SV=1
          Length = 784

 Score = 34.7 bits (78), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 11/90 (12%)

Query: 372 LDISSVSGLAKSILNTFSRNSASS----------ADNLVFSPR-LNFILQQQVLGPIVFR 420
           L + SV G++K+I+NTFS+    S           +N + S   L+F   QQ LG ++  
Sbjct: 498 LPVLSVMGISKNIINTFSKEQLDSFQQLKTLEAGGNNFICSCDFLSFTQGQQALGRVLVD 557

Query: 421 VDSKYLLDAASGKDGSHMEDVIYSLSYSLR 450
               Y  D+ S   G  ++D   SLS   R
Sbjct: 558 WPDDYRCDSPSHVRGQRLQDARLSLSECHR 587


>sp|B0G138|PKS21_DICDI Probable polyketide synthase 21 OS=Dictyostelium discoideum GN=pks21
            PE=3 SV=1
          Length = 2779

 Score = 34.3 bits (77), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 3/68 (4%)

Query: 371  RLDISSVSGLAKSILNTFSRNSASSADNLVFSPRLNFILQQQVLGPIVFRVDSKYLLDAA 430
            +LD +   G +K+I+    ++SA + D      +L+  +Q   + PI FR DSK  L  A
Sbjct: 2361 KLDSNETKGKSKNIIK---KDSAPTLDYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGA 2417

Query: 431  SGKDGSHM 438
            +G  G H+
Sbjct: 2418 TGFLGVHL 2425


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.133    0.398 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 172,449,538
Number of Sequences: 539616
Number of extensions: 7216942
Number of successful extensions: 16283
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 16278
Number of HSP's gapped (non-prelim): 9
length of query: 477
length of database: 191,569,459
effective HSP length: 121
effective length of query: 356
effective length of database: 126,275,923
effective search space: 44954228588
effective search space used: 44954228588
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)